BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781049|ref|YP_003065462.1| succinyl-CoA synthetase
subunit beta [Candidatus Liberibacter asiaticus str. psy62]
         (398 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781049|ref|YP_003065462.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040726|gb|ACT57522.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 398

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/398 (100%), Positives = 398/398 (100%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK
Sbjct: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL
Sbjct: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ
Sbjct: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ
Sbjct: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG
Sbjct: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE
Sbjct: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV
Sbjct: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398


>gi|315122387|ref|YP_004062876.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495789|gb|ADR52388.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 398

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/398 (82%), Positives = 366/398 (91%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAKALL++Y +PVA+GVV+SS+H A+SAIKTLPG LYVVKSQIHAGGRGKGRF+
Sbjct: 1   MDIHEYQAKALLKRYGIPVAEGVVVSSIHEADSAIKTLPGGLYVVKSQIHAGGRGKGRFR 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            LPA+S+GGVR+E S++ V+SD+RE+LGS L+TKQTGP GS+VNC+Y+EDGADIL+ELYL
Sbjct: 61  GLPANSRGGVRLEKSIEGVLSDVREMLGSILVTKQTGPAGSKVNCLYIEDGADILKELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG + F+ASTQGGMDIEEVAKDYPQKIFKL ID L+GVT +D+ +LCDMLEL+
Sbjct: 121 SLLVDRVSGKITFVASTQGGMDIEEVAKDYPQKIFKLPIDSLVGVTPKDIGNLCDMLELK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQARID   LFPNLYKAFCDKDMSLLEINPLIIM+NGRLRVLDSK+SFDDNALYR LDIQ
Sbjct: 181 GQARIDAESLFPNLYKAFCDKDMSLLEINPLIIMQNGRLRVLDSKVSFDDNALYRQLDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D SEED REIEA++H LSYI LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 241 ELHDDSEEDVREIEARKHGLSYITLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG DQDKVAAAFKII  DSSVKGILINIFGGI+RCDVLVKGILSAVK+V +NIPLVMRLE
Sbjct: 301 GGTDQDKVAAAFKIIMLDSSVKGILINIFGGIVRCDVLVKGILSAVKDVNVNIPLVMRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           GA VDIGN+LI ESGLNVITAIDLDDAAQKIV AVKGV
Sbjct: 361 GAKVDIGNQLIVESGLNVITAIDLDDAAQKIVRAVKGV 398


>gi|319404899|emb|CBI78500.1| succinyl-CoA synthetase, beta chain [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 398

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/397 (71%), Positives = 335/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV I SV  AE  +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAIYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +DSKGGVR+  S++ VI++++E+LG TLITKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSSDSKGGVRLAKSVEEVITNVKEMLGKTLITKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V+F+ ST+GGMDIE VA++ P+KIF L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTIGQVSFVVSTEGGMDIEMVAEETPEKIFTLPIDPTKGVTPSDCTKLCDSLKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+M NGRLRVLD+K+SFD+NALYRH DI 
Sbjct: 181 DSAREDGERLFPILYKAFCEKDMSLLEINPLIVMDNGRLRVLDAKVSFDNNALYRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEEDS+EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDSKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISESGLNVISADDLDDAAQKIVAAVKG 397


>gi|319407858|emb|CBI81511.1| succinyl-CoA synthetase, beta chain [Bartonella sp. 1-1C]
          Length = 398

 Score =  585 bits (1508), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/397 (71%), Positives = 335/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  PVA GV I SV  AE+ +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPVANGVAIYSVEQAENWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +DSKGGVR+  S++ VI++++E+LG TLITKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSSDSKGGVRLAKSVEEVITNVKEMLGKTLITKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V+F+ ST+GGMDIE VA++ P+KIF L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTIGQVSFVVSTEGGMDIETVAEETPEKIFTLPIDPTKGVTPSDCTKLCDSLKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAF +KDMSLLEINPLI+M NGRLRVLD+K+SFD+NALYRH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFYEKDMSLLEINPLIVMNNGRLRVLDAKVSFDNNALYRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEEDS+EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDISEEDSKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISESGLNVISADDLDDAAQKIVAAVKG 397


>gi|153008266|ref|YP_001369481.1| succinyl-CoA synthetase subunit beta [Ochrobactrum anthropi ATCC
           49188]
 gi|189081761|sp|A6WXE8|SUCC_OCHA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151560154|gb|ABS13652.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum anthropi ATCC
           49188]
          Length = 398

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/397 (69%), Positives = 337/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED + L D L+L+
Sbjct: 121 SILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP LYKAF +KDMSLLEINPLI+M +GR+RVLD+K+SFD NAL+RH DIQ
Sbjct: 181 GQAREDGVKLFPILYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|239833053|ref|ZP_04681382.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum intermedium LMG
           3301]
 gi|239825320|gb|EEQ96888.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum intermedium LMG
           3301]
          Length = 432

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/397 (69%), Positives = 336/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 35  MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 95  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 155 SILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP LYKAF +KDMSLLEINPLI+M +GR+RVLD+K+SFD NAL+RH DIQ
Sbjct: 215 GQAREDGVKLFPILYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQ 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 275 ELRDLSEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 335 GGASKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 395 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 431


>gi|319406382|emb|CBI80023.1| succinyl-CoA synthetase, beta chain [Bartonella sp. AR 15-3]
          Length = 398

 Score =  578 bits (1489), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/397 (70%), Positives = 333/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV I SV  AE  +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLYEYGAPIANGVAIYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  +SKGGVR+  S++ VI++++E+LG TLITKQTGP G +VN +Y+EDGA+I RELYL
Sbjct: 61  ELGPNSKGGVRLAKSVEEVITNVKEMLGKTLITKQTGPEGKQVNRLYIEDGANIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V+F+ ST+GGMDIE VA++ P+KIF L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTVGQVSFVVSTEGGMDIETVAEETPEKIFTLPIDPTKGVTPTDCTKLCDSLKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LY+AFC+KDMSLLEINPLI+M NGRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYRAFCEKDMSLLEINPLIVMDNGRLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISESGLNVISADDLDDAAQKIVAAVKG 397


>gi|319899504|ref|YP_004159601.1| succinyl-CoA synthetase, beta chain [Bartonella clarridgeiae 73]
 gi|319403472|emb|CBI77052.1| succinyl-CoA synthetase, beta chain [Bartonella clarridgeiae 73]
          Length = 398

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/397 (70%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + SV  AE  +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +DSKGGVR+  S+K VI++++E+LG TLITKQTGP G +VN +Y+E+GADI +ELYL
Sbjct: 61  ELGSDSKGGVRLAKSVKEVITNVKEMLGKTLITKQTGPEGKQVNRLYIENGADIEQELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G VAF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTIGQVAFVVSTEGGMDIEAVAEETPEKILTLPIDPTKGVTPTDCKKLCDALKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+M NG LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSARKDGEKLFPILYKAFCEKDMSLLEINPLIVMDNGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDISEEDPKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVITAVKEVGLRVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I++SGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISKSGLNVISADDLDDAAQKIVAAVKG 397


>gi|254717987|ref|ZP_05179798.1| succinyl-CoA synthetase subunit beta [Brucella sp. 83/13]
 gi|265982931|ref|ZP_06095666.1| succinyl-CoA ligase subunit beta [Brucella sp. 83/13]
 gi|306839765|ref|ZP_07472566.1| succinyl-CoA synthetase, beta subunit [Brucella sp. NF 2653]
 gi|306842924|ref|ZP_07475560.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO2]
 gi|306843377|ref|ZP_07475978.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO1]
 gi|264661523|gb|EEZ31784.1| succinyl-CoA ligase subunit beta [Brucella sp. 83/13]
 gi|306276068|gb|EFM57768.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO1]
 gi|306286947|gb|EFM58467.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO2]
 gi|306405120|gb|EFM61398.1| succinyl-CoA synthetase, beta subunit [Brucella sp. NF 2653]
          Length = 398

 Score =  571 bits (1472), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/397 (68%), Positives = 335/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR+ G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 121 SILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR DG  LFP LYKAF +KDMSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GEAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|240851388|ref|YP_002972791.1| succinyl-CoA synthetase subunit beta [Bartonella grahamii as4aup]
 gi|240268511|gb|ACS52099.1| succinyl-CoA synthetase subunit beta [Bartonella grahamii as4aup]
          Length = 398

 Score =  571 bits (1472), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 274/397 (69%), Positives = 333/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + SV  AE   + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAEKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G +AF+ ST+GGMDIE VA++ P+KIF L ID + GVTS D A LCD L+LQ
Sbjct: 121 SLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDAVEGVTSVDCARLCDALKLQ 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+GRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 SSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGRLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I ES LNVI A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIINESSLNVIPADNLDDAAQKIVAAVKG 397


>gi|17986422|ref|NP_539056.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 1
           str. 16M]
 gi|23502776|ref|NP_698903.1| succinyl-CoA synthetase subunit beta [Brucella suis 1330]
 gi|62290780|ref|YP_222573.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 1 str.
           9-941]
 gi|148559974|ref|YP_001259750.1| succinyl-CoA synthetase subunit beta [Brucella ovis ATCC 25840]
 gi|161619844|ref|YP_001593731.1| succinyl-CoA synthetase subunit beta [Brucella canis ATCC 23365]
 gi|163843949|ref|YP_001628353.1| succinyl-CoA synthetase subunit beta [Brucella suis ATCC 23445]
 gi|189024995|ref|YP_001935763.1| succinyl-CoA synthetase subunit beta [Brucella abortus S19]
 gi|225628126|ref|ZP_03786161.1| succinyl-CoA synthetase, beta subunit [Brucella ceti str. Cudo]
 gi|225853364|ref|YP_002733597.1| succinyl-CoA synthetase subunit beta [Brucella melitensis ATCC
           23457]
 gi|237816288|ref|ZP_04595281.1| succinyl-CoA synthetase, beta subunit [Brucella abortus str. 2308
           A]
 gi|254690069|ref|ZP_05153323.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|254694557|ref|ZP_05156385.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696182|ref|ZP_05158010.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700569|ref|ZP_05162397.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 5 str. 513]
 gi|254704939|ref|ZP_05166767.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 3 str. 686]
 gi|254708916|ref|ZP_05170727.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis B2/94]
 gi|254713657|ref|ZP_05175468.1| succinyl-CoA synthetase subunit beta [Brucella ceti M644/93/1]
 gi|254715989|ref|ZP_05177800.1| succinyl-CoA synthetase subunit beta [Brucella ceti M13/05/1]
 gi|254731100|ref|ZP_05189678.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|256030442|ref|ZP_05444056.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis
           M292/94/1]
 gi|256045532|ref|ZP_05448415.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059902|ref|ZP_05450088.1| succinyl-CoA synthetase subunit beta [Brucella neotomae 5K33]
 gi|256112259|ref|ZP_05453180.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 3
           str. Ether]
 gi|256158426|ref|ZP_05456324.1| succinyl-CoA synthetase subunit beta [Brucella ceti M490/95/1]
 gi|256253846|ref|ZP_05459382.1| succinyl-CoA synthetase subunit beta [Brucella ceti B1/94]
 gi|256258322|ref|ZP_05463858.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 9 str.
           C68]
 gi|256263152|ref|ZP_05465684.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 2
           str. 63/9]
 gi|256370328|ref|YP_003107839.1| succinyl-CoA synthetase subunit beta [Brucella microti CCM 4915]
 gi|260169352|ref|ZP_05756163.1| succinyl-CoA synthetase subunit beta [Brucella sp. F5/99]
 gi|260546046|ref|ZP_05821786.1| succinyl-CoA synthetase subunit beta [Brucella abortus NCTC 8038]
 gi|260562842|ref|ZP_05833328.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           16M]
 gi|260567585|ref|ZP_05838055.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 4 str. 40]
 gi|260755605|ref|ZP_05867953.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260758830|ref|ZP_05871178.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260760554|ref|ZP_05872897.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884631|ref|ZP_05896245.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|261214879|ref|ZP_05929160.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|261217755|ref|ZP_05932036.1| succinyl-CoA ligase subunit beta [Brucella ceti M13/05/1]
 gi|261220982|ref|ZP_05935263.1| succinyl-CoA ligase subunit beta [Brucella ceti B1/94]
 gi|261316413|ref|ZP_05955610.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis B2/94]
 gi|261321397|ref|ZP_05960594.1| succinyl-CoA ligase subunit beta [Brucella ceti M644/93/1]
 gi|261323872|ref|ZP_05963069.1| succinyl-CoA ligase subunit beta [Brucella neotomae 5K33]
 gi|261751075|ref|ZP_05994784.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261755637|ref|ZP_05999346.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 3 str. 686]
 gi|261758868|ref|ZP_06002577.1| succinyl-CoA ligase subunit beta [Brucella sp. F5/99]
 gi|265987484|ref|ZP_06100041.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|265991956|ref|ZP_06104513.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993688|ref|ZP_06106245.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996941|ref|ZP_06109498.1| succinyl-CoA ligase subunit beta [Brucella ceti M490/95/1]
 gi|294851169|ref|ZP_06791842.1| succinyl-CoA ligase subunit beta [Brucella sp. NVSL 07-0026]
 gi|297247167|ref|ZP_06930885.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 5 str.
           B3196]
 gi|54039643|sp|P66868|SUCC_BRUSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54042231|sp|P66867|SUCC_BRUME RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|75496187|sp|Q57AX2|SUCC_BRUAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046890|sp|A9M8R2|SUCC_BRUC2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046891|sp|A5VSQ3|SUCC_BRUO2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046892|sp|B0CIT0|SUCC_BRUSI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734927|sp|B2S880|SUCC_BRUA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778433|sp|C0RFH1|SUCC_BRUMB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|17982016|gb|AAL51320.1| succinyl-CoA synthetase beta chain [Brucella melitensis bv. 1 str.
           16M]
 gi|23348796|gb|AAN30818.1| succinyl-CoA synthetase, beta subunit [Brucella suis 1330]
 gi|62196912|gb|AAX75212.1| SucC, succinyl-CoA synthetase, beta subunit [Brucella abortus bv. 1
           str. 9-941]
 gi|148371231|gb|ABQ61210.1| succinyl-CoA synthetase, beta subunit [Brucella ovis ATCC 25840]
 gi|161336655|gb|ABX62960.1| succinyl-CoA synthetase, beta subunit [Brucella canis ATCC 23365]
 gi|163674672|gb|ABY38783.1| succinyl-CoA synthetase, beta subunit [Brucella suis ATCC 23445]
 gi|189020567|gb|ACD73289.1| succinyl-CoA synthetase subunit beta [Brucella abortus S19]
 gi|225616951|gb|EEH13998.1| succinyl-CoA synthetase, beta subunit [Brucella ceti str. Cudo]
 gi|225641729|gb|ACO01643.1| succinyl-CoA synthetase, beta subunit [Brucella melitensis ATCC
           23457]
 gi|237788355|gb|EEP62570.1| succinyl-CoA synthetase, beta subunit [Brucella abortus str. 2308
           A]
 gi|256000491|gb|ACU48890.1| succinyl-CoA synthetase subunit beta [Brucella microti CCM 4915]
 gi|260096153|gb|EEW80029.1| succinyl-CoA synthetase subunit beta [Brucella abortus NCTC 8038]
 gi|260152858|gb|EEW87950.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           16M]
 gi|260157103|gb|EEW92183.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 4 str. 40]
 gi|260669148|gb|EEX56088.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260670986|gb|EEX57807.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675713|gb|EEX62534.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260874159|gb|EEX81228.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|260916486|gb|EEX83347.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|260919566|gb|EEX86219.1| succinyl-CoA ligase subunit beta [Brucella ceti B1/94]
 gi|260922844|gb|EEX89412.1| succinyl-CoA ligase subunit beta [Brucella ceti M13/05/1]
 gi|261294087|gb|EEX97583.1| succinyl-CoA ligase subunit beta [Brucella ceti M644/93/1]
 gi|261295636|gb|EEX99132.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis B2/94]
 gi|261299852|gb|EEY03349.1| succinyl-CoA ligase subunit beta [Brucella neotomae 5K33]
 gi|261738852|gb|EEY26848.1| succinyl-CoA ligase subunit beta [Brucella sp. F5/99]
 gi|261740828|gb|EEY28754.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261745390|gb|EEY33316.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 3 str. 686]
 gi|262551409|gb|EEZ07399.1| succinyl-CoA ligase subunit beta [Brucella ceti M490/95/1]
 gi|262764669|gb|EEZ10590.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003022|gb|EEZ15315.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093057|gb|EEZ17207.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 2
           str. 63/9]
 gi|264659681|gb|EEZ29942.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|294819758|gb|EFG36757.1| succinyl-CoA ligase subunit beta [Brucella sp. NVSL 07-0026]
 gi|297174336|gb|EFH33683.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 5 str.
           B3196]
 gi|326409928|gb|ADZ66993.1| succinyl-CoA synthetase subunit beta [Brucella melitensis M28]
 gi|326539641|gb|ADZ87856.1| succinyl-CoA synthetase, beta subunit [Brucella melitensis M5-90]
          Length = 398

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/397 (68%), Positives = 334/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR+ G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 121 SILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDMSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|163869364|ref|YP_001610620.1| succinyl-CoA synthetase subunit beta [Bartonella tribocorum CIP
           105476]
 gi|189046886|sp|A9IZV3|SUCC_BART1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161019067|emb|CAK02625.1| succinyl-CoA synthetase, beta chain [Bartonella tribocorum CIP
           105476]
          Length = 398

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 274/397 (69%), Positives = 331/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + S+  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGRGKGQFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G +AF+ ST+GGMDIE VA++ P+KIF L ID   GVTS D A LCD LEL 
Sbjct: 121 SLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELH 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+G LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I +SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIINDSGLNVIPADDLDDAAQKIVAAVKG 397


>gi|49474816|ref|YP_032858.1| succinyl-CoA synthetase subunit beta [Bartonella quintana str.
           Toulouse]
 gi|81646720|sp|Q6FYD1|SUCC_BARQU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49240320|emb|CAF26802.1| Succinyl-CoA synthetase beta chain [Bartonella quintana str.
           Toulouse]
          Length = 398

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/397 (68%), Positives = 331/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + S+  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  DSKGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ S +GGMDIE VA++ P+KI  L +DP+ GVTS D   LCD LEL 
Sbjct: 121 SLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDALELH 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+G LRVLD+KISFD+NAL+RH DI 
Sbjct: 181 DNARKDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKISFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N++ G  +I++SGLNVI+A DLDDAAQKI+ AV+G
Sbjct: 361 GTNIEQGKAIISDSGLNVISASDLDDAAQKIIAAVRG 397


>gi|222087461|ref|YP_002545998.1| succinyl-CoA synthetase beta subunit protein [Agrobacterium
           radiobacter K84]
 gi|254778424|sp|B9JCF4|SUCC_AGRRK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|221724909|gb|ACM28065.1| succinyl-CoA synthetase beta subunit protein [Agrobacterium
           radiobacter K84]
          Length = 397

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/397 (68%), Positives = 334/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA GV I S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSFGAPVADGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++ +++LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSPDAKGGVRLAKSIEDVVANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ D  ++ D L+L+
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDM+LLE+NPLI+M NGRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GAAREDGAKLFPILYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKVSFDGNALFRHEDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EI+A +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397


>gi|49476305|ref|YP_034346.1| succinyl-CoA synthetase subunit beta [Bartonella henselae str.
           Houston-1]
 gi|81647476|sp|Q6G1M1|SUCC_BARHE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49239113|emb|CAF28417.1| Succinyl-CoA synthetase beta chain [Bartonella henselae str.
           Houston-1]
          Length = 398

 Score =  568 bits (1463), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/397 (68%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + SV  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ ST+GGMDIE VA++ P+KI  L I+   GVTS D A LCD L+L 
Sbjct: 121 SLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDALDLH 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+M NG LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMTNGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I++SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAAVKG 397


>gi|121602774|ref|YP_988362.1| succinyl-CoA synthetase subunit beta [Bartonella bacilliformis
           KC583]
 gi|189046885|sp|A1UQV9|SUCC_BARBK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120614951|gb|ABM45552.1| succinyl-CoA synthetase beta chain [Bartonella bacilliformis KC583]
          Length = 398

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 275/397 (69%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  PVA GV + SV  AE   K LPGPLYVVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPVANGVAVYSVEQAEKWAKKLPGPLYVVKSQIHAGGRGKGNFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGA+I RELYL
Sbjct: 61  ELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGANIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DRT+G VAF+ ST+GGMDIE VA + P+KI  L IDP  GVT  D   LCD L L 
Sbjct: 121 SLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDELNLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAFC+KDMSLLEINPLI+M +GRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GNAREDGEKLFPILYKAFCEKDMSLLEINPLIVMDDGRLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+SEED +EIEA +H+L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 GLRDISEEDPKEIEASKHDLAYIALDGMIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTHAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I +SGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIINDSGLNVISANDLDDAAQKIVAAVKG 397


>gi|110635724|ref|YP_675932.1| succinyl-CoA synthetase subunit beta [Mesorhizobium sp. BNC1]
 gi|123353105|sp|Q11CV8|SUCC_MESSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110286708|gb|ABG64767.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chelativorans
           sp. BNC1]
          Length = 397

 Score =  562 bits (1448), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 269/396 (67%), Positives = 332/396 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y  PVA+GV I +   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLRGYGAPVAQGVAIFTSGEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT G  AF+ ST+GGMDIE VA++ P+KI  L I P  GVT++DV  L   L+L 
Sbjct: 121 SILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDMSLLE+NPLI+M+NGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GAAAKDGETLFPILYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G ++I++SGLNVI A DLDDAA+KIV AVK
Sbjct: 361 GTNVDLGKKIISQSGLNVIPADDLDDAAKKIVAAVK 396


>gi|319409452|emb|CBI83101.1| succinyl-CoA synthetase, beta chain [Bartonella schoenbuchensis R1]
          Length = 398

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/396 (68%), Positives = 327/396 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L +Y  P+A GV + SV  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRILHEYGAPIANGVAVYSVEQAEKWAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAQSVEEVVANVKEMLGKTLVTKQTGAEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V F+ ST+GGMDIE VA++ P+KI  L I+   GVTS D   LCD L+L+
Sbjct: 121 SLLVDRTVGQVVFVVSTEGGMDIETVAEETPEKILTLPIESAKGVTSVDCTKLCDALDLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+G LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDISEEDPKEIEASKHDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV +AFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVK+V + +PLV+RLE
Sbjct: 301 GGASKEKVTSAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKDVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI+A DLDDAAQKIV AVK
Sbjct: 361 GTNVERGKEIIDNSGLNVISADDLDDAAQKIVTAVK 396


>gi|254470947|ref|ZP_05084350.1| succinyl-CoA synthetase, beta subunit [Pseudovibrio sp. JE062]
 gi|211960089|gb|EEA95286.1| succinyl-CoA synthetase, beta subunit [Pseudovibrio sp. JE062]
          Length = 399

 Score =  558 bits (1437), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 276/398 (69%), Positives = 330/398 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   A++A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAKAAADKLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S   V S   E+LG+TL+T QTG  G  VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAFSKDEVESHANEMLGNTLVTAQTGDAGKVVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G VAF+AST+GGMDIEEVA   P+KI  L I+PL GVT E  A+LCD L+L+
Sbjct: 121 SLLVDRTCGQVAFVASTEGGMDIEEVAHATPEKILTLPINPLEGVTEEKAAALCDTLKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR DG  LFP LYKAF +KDM+LLEINPLI+M+NGRLRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GEARKDGMKLFPILYKAFVEKDMALLEINPLIVMENGRLRVLDAKVSFDGNALFRHEDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA +H+L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKTEEDEKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV +AFKIITSD +V+GIL+NIFGGIMRCDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTSAFKIITSDPNVQGILVNIFGGIMRCDVIAEGVLAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV++G ++I ESG+NVI A DLDDAAQKIV AVK V
Sbjct: 361 GTNVELGKKIINESGMNVIPADDLDDAAQKIVAAVKEV 398


>gi|150398140|ref|YP_001328607.1| succinyl-CoA synthetase subunit beta [Sinorhizobium medicae WSM419]
 gi|189030213|sp|A6UDP2|SUCC_SINMW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150029655|gb|ABR61772.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium medicae
           WSM419]
          Length = 398

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/397 (67%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I S   A +A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVAEGVAIFSADEAAAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  S   V++  RE+LG+TL+TKQTGP+G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA+  P+KI  + IDP  GVT++D+ +L + L+L 
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR D   LFP LYKAF +KDMSLLE+NPLI+M NGR+RVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|15966808|ref|NP_387161.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti 1021]
 gi|307301636|ref|ZP_07581395.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti
           BL225C]
 gi|307316340|ref|ZP_07595784.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti AK83]
 gi|21264047|sp|Q9EYG9|SUCC_RHIME RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|11935179|gb|AAG42005.1| succinyl-CoA synthetase beta subunit [Sinorhizobium meliloti]
 gi|15076080|emb|CAC47634.1| Probable succinyl-CoA synthetase beta chain [Sinorhizobium meliloti
           1021]
 gi|306898180|gb|EFN28922.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti AK83]
 gi|306903334|gb|EFN33923.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti
           BL225C]
          Length = 398

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/397 (67%), Positives = 334/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++ +++LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA+  P+KI  + IDP  GVT+E++ +L D L+L+
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR D   LFP LYKAF +KDMSLLE+NPLI+M NGR+RVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDTTEEDDKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|118590556|ref|ZP_01547958.1| succinyl-CoA synthetase subunit beta [Stappia aggregata IAM 12614]
 gi|118437019|gb|EAV43658.1| succinyl-CoA synthetase subunit beta [Stappia aggregata IAM 12614]
          Length = 399

 Score =  555 bits (1430), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 277/397 (69%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   AE+A K+LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  SL  V S+ +E+LG+TL+TKQTG  G  VN +Y+EDGADI RELYL
Sbjct: 61  ELSADAKGGVRLAFSLDEVTSNAKEMLGNTLVTKQTGAAGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G  AF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  D A LCD LEL 
Sbjct: 121 SILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTLPIDPEAGVTEADAAKLCDALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP L+ AF +KDMSLLE+NPLI+MK+G LRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GAAREDGMKLFPILHTAFVEKDMSLLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRDV+EED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDVTEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVIAADDLDDAAQKIVKAVKG 397


>gi|114707318|ref|ZP_01440215.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
 gi|114537199|gb|EAU40326.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
          Length = 396

 Score =  555 bits (1429), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/395 (67%), Positives = 328/395 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA+GV I+    AE A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGFGAPVAEGVAITDAGEAEKAARMLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++ +E+LG TL+TKQTG +G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSIEDVVANAKEMLGHTLVTKQTGESGKQVNRLYIEDGADIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR  G VAF+AST+GGMDIE VA + P+KI  L IDP  GVT  D + L D L+L 
Sbjct: 121 SILVDRAVGKVAFVASTEGGMDIETVAAETPEKIVNLPIDPTAGVTEADASKLSDALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR DG  LFP LYKAF DKDMSLLEINPLI+M NGRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GEARADGMTLFPTLYKAFMDKDMSLLEINPLIVMTNGRLRVLDAKVSFDSNALFRHDDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGDIGCMVNGAGLAMATMDIIKLYGKEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV +AFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTSAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G +++ +SGL++ +A DLDDAAQKIV AV
Sbjct: 361 GTNVDQGKQILDQSGLDITSADDLDDAAQKIVKAV 395


>gi|83944771|ref|ZP_00957137.1| succinyl-CoA synthetase subunit beta [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851553|gb|EAP89408.1| succinyl-CoA synthetase subunit beta [Oceanicaulis alexandrii
           HTCC2633]
          Length = 398

 Score =  554 bits (1427), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/396 (66%), Positives = 331/396 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKALL+ Y  PVA+GV + SV  A  A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKALLKSYGAPVAEGVAVFSVEEASKAADQLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S + V  + +E+LG+TL+T QTGP G +VN +Y+EDGADI  ELYL
Sbjct: 61  ELPADAKGGVRLAFSKEDVAKNAKEMLGNTLVTHQTGPEGKQVNRLYIEDGADISTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLV+R +G VAF+ ST+GGMDIE+VA++ P+KI  + IDP  GVT++D + +   LEL+
Sbjct: 121 SLLVNRETGQVAFVVSTEGGMDIEQVAEETPEKILTVNIDPTTGVTADDASRIAKALELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR D   L P LYKAF +KDMSLLEINPLI+M+NGRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GQARDDMLSLAPILYKAFTEKDMSLLEINPLIVMENGRLRVLDAKVSFDGNALFRHDDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+YIALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDDKEIEASKYDLAYIALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGL++ +A DLDDAA+KI  AVK
Sbjct: 361 GTNVDLGKKILNESGLDITSADDLDDAAKKITAAVK 396


>gi|328545847|ref|YP_004305956.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
           synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
           l [polymorphum gilvum SL003B-26A1]
 gi|326415587|gb|ADZ72650.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
           synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
           l [Polymorphum gilvum SL003B-26A1]
          Length = 399

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/397 (69%), Positives = 333/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   A +A + LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAAAAARKLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  SL+ V+ + RE+LG TL+T QTGP G  VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLSFSLEDVVKNAREMLGHTLVTAQTGPAGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G  AF+ ST+GGMDIE VA+  P+KI  + IDP  GVT  D A LCD LEL+
Sbjct: 121 SILVDRSVGRPAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDTGVTEADAARLCDALELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDMSLLEINPLI+MK+GRLRVLD+K+SFD NAL+RH +I 
Sbjct: 181 GAARADGMTLFPILYKAFMEKDMSLLEINPLIVMKDGRLRVLDAKVSFDGNALFRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDITEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCDV+ +G+L+AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVLAAVREVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++IAESGLNVI A DLDDAA+KIV AVKG
Sbjct: 361 GTNVELGKKIIAESGLNVIAADDLDDAAKKIVAAVKG 397


>gi|307942802|ref|ZP_07658147.1| succinyl-CoA ligase [ADP-forming] subunit beta [Roseibium sp.
           TrichSKD4]
 gi|307773598|gb|EFO32814.1| succinyl-CoA ligase [ADP-forming] subunit beta [Roseibium sp.
           TrichSKD4]
          Length = 399

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 273/397 (68%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   AE+A K LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAEAAAKQLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  SL+ V S  +E+LG+ L+TKQTG +G  VN +Y+EDGADI RELYL
Sbjct: 61  ELAADAKGGVRLAFSLEEVTSHAKEMLGNALVTKQTGDSGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G  AF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  +   LCD L+L 
Sbjct: 121 SILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIHNLPIDPDTGVTEANAKQLCDWLKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP L+KAF +KDM+LLE+NPLI+MK+GRLRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GQAREDGMTLFPILHKAFVEKDMALLEVNPLIVMKDGRLRVLDAKVSFDGNALFRHDDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVIAADDLDDAAQKIVKAVKG 397


>gi|13473641|ref|NP_105209.1| succinyl-CoA synthetase subunit beta [Mesorhizobium loti
           MAFF303099]
 gi|21264043|sp|Q98EC5|SUCC_RHILO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|14024391|dbj|BAB50995.1| succinyl-coA synthetase beta chain [Mesorhizobium loti MAFF303099]
          Length = 397

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/397 (66%), Positives = 329/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KALL+ +  PVA+GV +     AE+A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAARALPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++  E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G +AF+ ST+GGMDIE VA D P+K+  + IDP  GVT++DV  L   L+L 
Sbjct: 121 SILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAIDPERGVTADDVKKLNAALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DGG LFP LYKAF +KDMSLLE+NPLI+MKNGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GDAAKDGGTLFPILYKAFIEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT D +VKGILINIFGGIM+CD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITKDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G ++I +SGLNV++A DLDDAA+KIV AVKG
Sbjct: 361 GTNAELGKKIINDSGLNVVSADDLDDAAKKIVAAVKG 397


>gi|222150041|ref|YP_002550998.1| succinyl-CoA synthetase subunit beta [Agrobacterium vitis S4]
 gi|254778425|sp|B9JTS8|SUCC_AGRVS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|221737023|gb|ACM37986.1| succinyl-CoA synthetase beta chain [Agrobacterium vitis S4]
          Length = 398

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/396 (67%), Positives = 329/396 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA+GV I S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSFGAPVAEGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V S + E+LG+TL+T QTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAFSIDEVKSHVAEMLGNTLVTNQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ ++ +L   L L+
Sbjct: 121 SLLVDRAVGQVAFVVSTEGGMDIETVAHDTPEKIISVAIDPEAGVTAANLEALTAALLLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A+ D   LFP LYKAF +KDM+LLE+NPLI+MKNGR+RVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GEAKADAEKLFPILYKAFVEKDMALLEVNPLIVMKNGRMRVLDAKMSFDGNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKTEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+L+AVK+V + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKDVGLTVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVK
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVK 396


>gi|260464173|ref|ZP_05812366.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
 gi|259029976|gb|EEW31259.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 397

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/397 (66%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KALL+ +  PVA+GV +     AE+A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQGKALLKSFGAPVAEGVPVFKADEAEAAAQALPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++  E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ D+ +L   L+L 
Sbjct: 121 SILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIITVAIDPEKGVTAADLKALNTALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDMSLLE+NPLI+MKNGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GDAANDGNTLFPILYKAFVEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT D +VKGILINIFGGIM+CD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITKDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G ++I +SGLNV++A DLDDAA+KIV AVKG
Sbjct: 361 GTNAELGKKIINDSGLNVVSADDLDDAAKKIVSAVKG 397


>gi|319780726|ref|YP_004140202.1| succinyl-CoA synthetase subunit beta [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166614|gb|ADV10152.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 397

 Score =  545 bits (1403), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/397 (66%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KALL+ +  PVA+GV +     AE+A K LPGPLYVVKSQIHAGGRGKG+F 
Sbjct: 1   MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAAKALPGPLYVVKSQIHAGGRGKGKFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++  E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVADVVANANEMLGNTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G +AF+ ST+GGMDIE VA D P+KI  + IDP  GVTS D+ +L   L+L 
Sbjct: 121 SILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKIITVAIDPEKGVTSADLKALNGALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF DKDMSLLE+NPLI+MKNGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GDAAKDGDTLFPILYKAFVDKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT D +VKGILINIFGGIM+CD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITRDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G ++I +SGLNV++A DLDDAA+KIV AVKG
Sbjct: 361 GTNAELGKKIINDSGLNVVSADDLDDAAKKIVAAVKG 397


>gi|163761408|ref|ZP_02168482.1| succinyl-CoA synthetase subunit beta [Hoeflea phototrophica DFL-43]
 gi|162281403|gb|EDQ31700.1| succinyl-CoA synthetase subunit beta [Hoeflea phototrophica DFL-43]
          Length = 398

 Score =  541 bits (1393), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 269/397 (67%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA+GV I S   AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGFGAPVAEGVAIFSADEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+    +   E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAFSIDEAKAHAAEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G VAF+ ST+GGMDIE VA++ P+KI  + IDP  GVT+ D+A L   LEL 
Sbjct: 121 SILVDRTVGQVAFVVSTEGGMDIEAVAEETPEKIITVAIDPEAGVTAADLAKLNGALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  DG  LFP LYKAF +KDM+LLE+NPLI+MK+GRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GEAAADGEKLFPILYKAFVEKDMALLEVNPLIVMKDGRLRVLDAKVSFDNNALFRHDDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EED++EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDLTEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGQEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV +G ++I ESGL+VI A DLDDAAQKIV+AVKG
Sbjct: 361 GTNVALGKKIINESGLDVIAADDLDDAAQKIVNAVKG 397


>gi|254502561|ref|ZP_05114712.1| succinyl-CoA synthetase, beta subunit subfamily [Labrenzia
           alexandrii DFL-11]
 gi|222438632|gb|EEE45311.1| succinyl-CoA synthetase, beta subunit subfamily [Labrenzia
           alexandrii DFL-11]
          Length = 399

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/397 (67%), Positives = 330/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++  PVA+GV I S   AE+A K+LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEFGAPVAEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL A++KGGVR+  SL  V +   E+LG+TL+T QTG  G  VN +Y+EDGADI RELYL
Sbjct: 61  ELDAEAKGGVRLAFSLDEVKAHAAEMLGNTLVTAQTGDAGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G  AF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  D A LCD LEL 
Sbjct: 121 SILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIITLPIDPDTGVTEADAAKLCDALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP L+KAF +KDM+LLE+NPLI+MK+G+LRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GAARQDGFKLFPILHKAFVEKDMALLEVNPLIVMKDGQLRVLDAKVSFDGNALFRHDDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCD++ +G+L+AV EV + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDIIAEGVLAAVTEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I+ESG+NVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIISESGMNVIAADDLDDAAQKIVKAVKG 397


>gi|254707547|ref|ZP_05169375.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis
           M163/99/10]
 gi|261315030|ref|ZP_05954227.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis
           M163/99/10]
 gi|261304056|gb|EEY07553.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis
           M163/99/10]
          Length = 375

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 252/375 (67%), Positives = 314/375 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR+ G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 121 SILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDMSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESG 375
           G NV++G ++I ESG
Sbjct: 361 GTNVELGKKIINESG 375


>gi|82700691|ref|YP_415265.1| succinyl-CoA synthetase subunit beta [Brucella melitensis biovar
           Abortus 2308]
 gi|82616792|emb|CAJ11882.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
           synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
           l [Brucella melitensis biovar Abortus 2308]
          Length = 376

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/375 (68%), Positives = 318/375 (84%)

Query: 23  VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISD 82
           + + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FKELPAD+KGGVR+  S++ V+++
Sbjct: 1   MAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVAN 60

Query: 83  IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMD 142
            +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYLS+L+DR+ G  AF+ ST+GGMD
Sbjct: 61  AKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMD 120

Query: 143 IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKD 202
           IE VA++ P+KI  + IDP  GVT ED   L D L+L+G AR DG  LFP LYKAF +KD
Sbjct: 121 IEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKD 180

Query: 203 MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSY 262
           MSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI ELRD++EED +EIEA +++L+Y
Sbjct: 181 MSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAY 240

Query: 263 IALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVK 322
           +ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVGGGA ++KV AAFKIIT+D +V+
Sbjct: 241 VALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVE 300

Query: 323 GILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAI 382
           GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLEG NV++G ++I ESGLNVI+A 
Sbjct: 301 GILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISAD 360

Query: 383 DLDDAAQKIVHAVKG 397
           DLDDAAQKIV AVKG
Sbjct: 361 DLDDAAQKIVAAVKG 375


>gi|90421033|ref|ZP_01228936.1| succinyl-CoA synthetase, beta subunit [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334668|gb|EAS48445.1| succinyl-CoA synthetase, beta subunit [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 396

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/395 (67%), Positives = 323/395 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA GV I+ V  AE+A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKEVLKGFGAPVASGVPITQVSEAEAAARQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+    E+LG+TL+T QTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVEEVVQHATEMLGNTLVTAQTGDAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR  G VAF+AST+GGMDIE VA + P+KI  + IDPL GVT  D   LCD LEL 
Sbjct: 121 SILVDRAVGRVAFVASTEGGMDIETVAHETPEKIITVAIDPLEGVTEADAGKLCDALELD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP LYKAF +KDMSLLEINPLI+M +GRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GQARTDGMSLFPILYKAFTEKDMSLLEINPLIVMTDGRLRVLDAKVSFDGNALFRHDDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGKEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+ KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGADKAKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G  ++ +SGL +  A DLDDAA+KIV AV
Sbjct: 361 GTNVDKGKAILNDSGLAITAADDLDDAAKKIVAAV 395


>gi|227823644|ref|YP_002827617.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium fredii NGR234]
 gi|227342646|gb|ACP26864.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium fredii NGR234]
          Length = 397

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/397 (65%), Positives = 327/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I S   A++A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVAEGVAIFSADEAKAAARKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  S+    +  +E+LG+TL+T QTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSADAKGGVRLAFSIDEAQAHAKEMLGNTLVTAQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G +AF+ ST+GGMDIE VA D P+KI  + I+P  GVT+ D+A L   L+L+
Sbjct: 121 SLLVDRSVGQIAFVVSTEGGMDIEAVAHDTPEKIVNVAINPEAGVTAADLAKLTSALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A+ D   LFP LYKAF +KDMSLLEINPLI+MKNGR+RVLD+K+SFD NAL+RH DI+
Sbjct: 181 GEAKADAEKLFPILYKAFVEKDMSLLEINPLIVMKNGRMRVLDAKVSFDGNALFRHDDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAVQEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|329891084|ref|ZP_08269427.1| succinyl-CoA ligase ADP-forming subunit beta [Brevundimonas
           diminuta ATCC 11568]
 gi|328846385|gb|EGF95949.1| succinyl-CoA ligase ADP-forming subunit beta [Brevundimonas
           diminuta ATCC 11568]
          Length = 396

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/395 (66%), Positives = 322/395 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ Y  PVA GV I+S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGYGAPVAAGVAITSADQAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++  ++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELPADAKGGVRLAFSIEEAVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G  AF+ ST+GGMDIEEVA   P+KI  + I+P  GVT+E+VA++   LEL 
Sbjct: 121 SLLVDRSVGQTAFVVSTEGGMDIEEVAHATPEKIHTIAINPEAGVTAENVAAINAALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDM +LEINPLI+M+NG LRVLD+K+SFD NALYRH DI+
Sbjct: 181 GDAAEDGKSLFPILYKAFVEKDMDMLEINPLIVMENGHLRVLDAKVSFDGNALYRHEDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKDKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G +++ ESGL +  A DLDDAAQKIV AV
Sbjct: 361 GTNAELGKKILNESGLTIQAADDLDDAAQKIVAAV 395


>gi|254294601|ref|YP_003060624.1| succinyl-CoA synthetase subunit beta [Hirschia baltica ATCC 49814]
 gi|254043132|gb|ACT59927.1| succinyl-CoA synthetase, beta subunit [Hirschia baltica ATCC 49814]
          Length = 398

 Score =  527 bits (1358), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/397 (66%), Positives = 315/397 (79%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L+++  PVA GV I S   A +A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKAVLKEFGAPVADGVAIFSADEAAAAADKLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S + VIS+  ++LG+TL+T QTGP G +VN +Y+EDGADI  ELYL
Sbjct: 61  EAEAGEKGGVRLAFSKEDVISNAAQMLGNTLVTHQTGPAGKQVNRLYIEDGADIKTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG  AF+AST+GGMDIEEVA+  P+KI  + IDP+ GVT     SLCD L L+
Sbjct: 121 SLLVDRASGQPAFVASTEGGMDIEEVAESTPEKILTITIDPVAGVTDAVAESLCDALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  L   LYKAF +KDM +LE+NPLI+M+N RLRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GTAREDGIALSRILYKAFTEKDMDMLEVNPLIVMENERLRVLDAKMSFDGNALFRHPDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA + +L+YIAL+G IGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ELRDKTEEDEKEIEASEWDLAYIALEGTIGCMVNGAGLAMATMDIIKLYGEEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +KVAAAFKII  D +VKGIL+NIFGGIM+CDV+ +G+L AVKE  + +PLV+RLE
Sbjct: 301 GGANAEKVAAAFKIIMKDPAVKGILVNIFGGIMKCDVIAEGVLQAVKETNLAVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIPANDLDDAAQKIVAAVKG 397


>gi|116254170|ref|YP_770008.1| succinyl-CoA synthetase subunit beta [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|189081780|sp|Q1MAW1|SUCC_RHIL3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115258818|emb|CAK09924.1| putative succinyl-CoA synthetase beta chain [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 397

 Score =  525 bits (1351), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/397 (65%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++    EL+
Sbjct: 121 SLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKAFELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLEINPLI+MK+G LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKTLFPMLYKAFGEKDMALLEINPLIVMKDGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 VLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|254420526|ref|ZP_05034250.1| succinyl-CoA synthetase, beta subunit subfamily [Brevundimonas sp.
           BAL3]
 gi|196186703|gb|EDX81679.1| succinyl-CoA synthetase, beta subunit subfamily [Brevundimonas sp.
           BAL3]
          Length = 396

 Score =  525 bits (1351), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/395 (65%), Positives = 324/395 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA+GV I+S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGFGAPVAEGVPITSADQAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+ + +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELPADAKGGVRLAFSIEDVVKNAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ ST+GGMDIE VA D P+KI  ++IDP  GVT  DVA++     L 
Sbjct: 121 SLLVDRQYGRVAFVVSTEGGMDIEAVAHDTPEKIQTIVIDPATGVTEADVAAINAAYGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDM++LE+NPLI+M+NGRLRVLD+K+SFD NAL+RH D++
Sbjct: 181 GDAAEDGKSLFPALYKAFVEKDMAMLEVNPLIVMENGRLRVLDAKVSFDGNALFRHEDMR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVSLDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPNVQGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G +++ ESGL +  A DLDDAAQKIV AV
Sbjct: 361 GTNAELGKKILNESGLTIQAADDLDDAAQKIVAAV 395


>gi|241206657|ref|YP_002977753.1| succinyl-CoA synthetase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860547|gb|ACS58214.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 397

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/397 (64%), Positives = 323/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DV ++   L+L 
Sbjct: 121 SILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIHTIAIDPEAGVTAADVVAISKALQLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+MK+G LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKTLFPTLYKAFGEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 TLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|15889893|ref|NP_355574.1| succinyl-CoA synthetase subunit beta [Agrobacterium tumefaciens
           str. C58]
 gi|21264034|sp|Q8UC60|SUCC_AGRT5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|15157842|gb|AAK88359.1| succinyl-CoA synthetase beta chain [Agrobacterium tumefaciens str.
           C58]
          Length = 397

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/397 (65%), Positives = 323/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+S  R++LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + I+P  GV+  DVA++   LEL 
Sbjct: 121 SLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAINPEKGVSDADVAAISKALELD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+M+NG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GVAAEDAKALFPILYKAFNEKDMALLEVNPLIVMENGHLRVLDAKMSFDGNALFRHEDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +L+ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKLLNESGLAITAADDLDDAAKKIVAAING 397


>gi|325294007|ref|YP_004279871.1| succinyl-CoA synthetase subunit beta [Agrobacterium sp. H13-3]
 gi|325061860|gb|ADY65551.1| succinyl-CoA synthetase subunit beta [Agrobacterium sp. H13-3]
          Length = 397

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/397 (65%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  +++ V+S  +++LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAKTIEEVVSHSKDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GV+  DVA++   LEL+
Sbjct: 121 SLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIHTIAIDPEKGVSDADVAAISKALELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+M+NG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GVAAEDAKALFPILYKAFNEKDMALLEVNPLIVMENGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +L+ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKLLNESGLAITAADDLDDAAKKIVAAING 397


>gi|114571358|ref|YP_758038.1| succinyl-CoA synthetase subunit beta [Maricaulis maris MCS10]
 gi|122315054|sp|Q0AKU3|SUCC_MARMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114341820|gb|ABI67100.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Maricaulis
           maris MCS10]
          Length = 399

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/396 (65%), Positives = 322/396 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L+ +  PVA+GV I S   A +A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKAVLKSFGAPVAEGVAIFSADEAAAAADQLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +D+KGGVR+  S + V+ + +E+LG+TL+T QTGP G RVN +Y+EDGADI  ELY 
Sbjct: 61  ELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKRVNRLYIEDGADIATELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLV+R +G VAF+ ST+GGMDIEEVA + P+KI  + IDP  GVT    A++CD L+L+
Sbjct: 121 SLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPSTGVTDASAAAVCDALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR D   L   LY AFC+KDMS+LEINPLI+M NG +RVLD+K+SFD NAL+RH DI 
Sbjct: 181 GQAREDMMGLAKILYTAFCEKDMSMLEINPLIVMDNGHVRVLDAKVSFDGNALFRHPDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVK+V + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKDVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G ++I ESGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVAKGKQIINESGLNVIAADDLDDAAQKIVAAVK 396


>gi|190893738|ref|YP_001980280.1| succinyl-CoA synthetase, beta subunit [Rhizobium etli CIAT 652]
 gi|226734977|sp|B3PQ90|SUCC_RHIE6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|190699017|gb|ACE93102.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli CIAT
           652]
          Length = 397

 Score =  518 bits (1334), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 260/397 (65%), Positives = 325/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I     AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V+++++E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSVEDVVANVKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIERELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L 
Sbjct: 121 SLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISSALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAGEDAKSLFPLLYKAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|86359471|ref|YP_471363.1| succinyl-CoA synthetase subunit beta [Rhizobium etli CFN 42]
 gi|123510555|sp|Q2K3F0|SUCC_RHIEC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|86283573|gb|ABC92636.1| succinyl-CoA synthetase beta subunit protein [Rhizobium etli CFN
           42]
          Length = 397

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 259/397 (65%), Positives = 325/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I     AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V+++ +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIEDVVANAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIDRELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L+
Sbjct: 121 SLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISAALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LY+AF +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKSLFPLLYRAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|209551256|ref|YP_002283173.1| succinyl-CoA synthetase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226734978|sp|B5ZSR9|SUCC_RHILW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|209537012|gb|ACI56947.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 397

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/397 (64%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  A +A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAAAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIEEVVAHAKEMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++   L+L 
Sbjct: 121 SILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKALQLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+MK+G LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKSLFPALYKAFNEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 TLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|327188904|gb|EGE56096.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli
           CNPAF512]
          Length = 397

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 258/397 (64%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I     AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V+++++++LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIEDVVANVKDMLGNTLVTAQTGEAGKQVNRLYIEDGADIDRELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L 
Sbjct: 121 SLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISSALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   L P LYKAF +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKSLLPLLYKAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|114799396|ref|YP_759040.1| succinyl-CoA synthetase subunit beta [Hyphomonas neptunium ATCC
           15444]
 gi|123028420|sp|Q0C5F3|SUCC_HYPNA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114739570|gb|ABI77695.1| succinyl-CoA synthetase, beta subunit [Hyphomonas neptunium ATCC
           15444]
          Length = 397

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/397 (62%), Positives = 311/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA+GV + S+   + AI TLPGPL+VVKSQIHAGGRGKG+F 
Sbjct: 1   MNIHEYQAKALLKSFGAPVAEGVPVLSLADVQKAIDTLPGPLWVVKSQIHAGGRGKGKFI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  + + V      +LG+ L+T QT   G +VN +Y+EDGADI +ELYL
Sbjct: 61  EKEAGEKGGVRLAFNKEDVKKHAEAMLGNHLVTAQTSAAGKQVNRLYIEDGADIEKELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  VAF+ ST+GGMDIE VA D P+KI  + IDP+ GVT  D A +   L L 
Sbjct: 121 SILVDRATSNVAFVVSTEGGMDIEAVAHDTPEKILTVQIDPMAGVTPADAAKINSALNLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  L+P LYKAF +KDM++LE+NPLI+MK+G LRVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GSAAEDGLKLYPILYKAFVEKDMAMLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D +E+D++E+EA + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALKDETEQDAKELEAAEWDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGEEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKII  D +VKGIL+NIFGGIM+CDV+ +G+++AVKE  + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIIMKDPNVKGILVNIFGGIMKCDVIAEGVIAAVKETNLAVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I ESGLNVI A DLDDAAQKIV AV+G
Sbjct: 361 GTNVDLGKKIIRESGLNVIPADDLDDAAQKIVKAVRG 397


>gi|302381585|ref|YP_003817408.1| succinyl-CoA synthetase subunit beta [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302192213|gb|ADK99784.1| succinyl-CoA synthetase, beta subunit [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 396

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/395 (63%), Positives = 317/395 (80%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA GV ++SV   E+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGFGAPVAAGVAVTSVDQVEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++  ++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAFSVEEAVAHAKEMLGNTLVTAQTGDAGKQVNRLYIEDGADIERELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G +A++ ST+GGMDIE VA D P KI  ++IDP  GVT  DVA++     L 
Sbjct: 121 SLLVDRAHGRIAYVVSTEGGMDIEAVAHDTPDKIQTIVIDPETGVTEADVAAINAAYGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF + DM +LE+NPLI+MK+G LRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GAAAEDGKSLFPILYKAFVETDMDMLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHEDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 TLRDETEEDAKEIEASKWDLAYVSLDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKDKVAAAFKIITADPNVQGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G +++ ESGL +  A DLDDAAQKIV AV
Sbjct: 361 GTNAELGKKILNESGLAITAADDLDDAAQKIVAAV 395


>gi|154244112|ref|YP_001415070.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
 gi|154158197|gb|ABS65413.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
          Length = 400

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/396 (61%), Positives = 312/396 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+KY  PV++GV +  V  AE+A K L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKKYGAPVSRGVPVLKVEDAEAAAKELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V + + ++LG+TL+T QTGP G +VN +Y+EDG+DI +E Y+
Sbjct: 61  EPEAGDKGGVRLAKSIDEVKTFVSQMLGNTLVTIQTGPAGKQVNRLYLEDGSDIEKEFYI 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ ST+GGMDIEEVA  +P+KI    +DP+ GV       +   L L 
Sbjct: 121 SLLVDRATSHVAFVVSTEGGMDIEEVAHSHPEKIVTFSVDPVTGVQGFHGRKIAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G L   LY AF D DM++LEINPLII K+ +LRVLD+K++FD NA++RH ++ 
Sbjct: 181 GDLAKQAGKLAEVLYTAFVDTDMAMLEINPLIITKDAQLRVLDAKVTFDSNAMFRHPELA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DII+LYG +PANFLDVG
Sbjct: 241 ELRDLTEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIQLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+L+AVK V + +PLV+RLE
Sbjct: 301 GGANEEKVTAAFKIITADPNVKGILVNIFGGIMQCDVIARGVLAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I ESGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAAVK 396


>gi|296447231|ref|ZP_06889161.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
 gi|296255290|gb|EFH02387.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
          Length = 399

 Score =  501 bits (1291), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/397 (61%), Positives = 304/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++  PVA+G  +     A  A ++LPGP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAILREFGAPVAEGTPVFEAQEARQAAQSLPGPVFVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  SL  V +  +E+LGSTL+T QTG TG +VN +Y+EDGADI +E YL
Sbjct: 61  ETAAGDKGGVRLARSLDEVETFAKEMLGSTLVTVQTGATGKQVNRLYIEDGADIAQEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +  V+F+ ST+GG DIE VA   P+KI    +DP  GV       + D L L+
Sbjct: 121 SLLIDRATSRVSFVVSTEGGTDIEAVAHATPEKIVTFSVDPATGVMPHHGRKVADALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  DL   L+ AF  KDM LLEINPLI+ K+GRLR LD+KISFDDNALYRH D+ 
Sbjct: 181 GPLVKEAVDLTEKLFSAFLAKDMELLEINPLIVTKDGRLRCLDAKISFDDNALYRHPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA ++ L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKTEEDEKEIEASKYELAYIALDGTIGCMVNGAGLAMATMDIIKLYGENPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVTAAFKIITADPKVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLAVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  ++A SGL+VI A DLDDAAQKIV AV+G
Sbjct: 361 GTNVELGKSILAASGLDVIPADDLDDAAQKIVAAVRG 397


>gi|323137594|ref|ZP_08072671.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
 gi|322397220|gb|EFX99744.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
          Length = 398

 Score =  501 bits (1290), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/396 (61%), Positives = 308/396 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++  PVA GV +     A +A + LPGP+YVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAILREFGAPVAMGVPVLKAEEAAAAARQLPGPVYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  +GGVR+  S++   +  +++LG+TL+T QTG  G +VN +Y+EDGA I +E YL
Sbjct: 61  EDSAGPQGGVRIAKSIEEAEAFAKQMLGATLVTLQTGDAGKQVNRLYIEDGAAIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +  +AF+ ST+GGMDIE+VA D P+KI    +DP  G+       + D L L+
Sbjct: 121 SMLIDRATSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGLMPHHGRHIADALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      GDL   LY AF  KDM LLEINPLI+ K+G+LR LD+K+SF++NALYRH D+ 
Sbjct: 181 GDLAKQAGDLAEKLYAAFVAKDMELLEINPLIVTKDGKLRCLDAKVSFENNALYRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+YI+LDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDEKEIEASKHDLAYISLDGNIGCMVNGAGLAMATMDIIKLYGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIIT+D +VKGIL+NIFGGIMRCD + +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITADPNVKGILVNIFGGIMRCDTIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G ++I ESGLNVI A DLDDAAQKIV A+K
Sbjct: 361 GTNVDLGKKIINESGLNVIPADDLDDAAQKIVGAIK 396


>gi|85713704|ref|ZP_01044694.1| succinyl-CoA synthetase subunit beta [Nitrobacter sp. Nb-311A]
 gi|85699608|gb|EAQ37475.1| succinyl-CoA synthetase subunit beta [Nitrobacter sp. Nb-311A]
          Length = 399

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/398 (61%), Positives = 306/398 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR++ VPV++GV       AE+A  TL GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLREFGVPVSRGVPALKASEAEAAAHTLGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V     ++LG+TL+T QTGP G +VN +Y+E+G+DI +E YL
Sbjct: 61  ESAAGDKGGVRLARSIDEVKQFAGQMLGATLVTAQTGPAGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  ++F+ ST+GGM+IEEVA   P+KI    +DP+ GV      +    L L+
Sbjct: 121 SALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPVTGVMGHHGRTAAKALGLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM++LEINPL++ K G LRVLD+KISFD NALYRH ++ 
Sbjct: 181 GDLGKQAEKLVAQLYNAFIAKDMAMLEINPLVVTKQGELRVLDAKISFDSNALYRHSEVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EI+A +++LSY+ALDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 241 ALRDESEEDAKEIKASRYDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +VKGILINIFGGIM+CDV+  G+++AVK+V +N+PLV+RLE
Sbjct: 301 GGATKDKVAAAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD G ++I ESGLNV+ A DLDDAAQKIV AVKGV
Sbjct: 361 GTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKAVKGV 398


>gi|146337550|ref|YP_001202598.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. ORS278]
 gi|189046889|sp|A4YKC6|SUCC_BRASO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146190356|emb|CAL74352.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS278]
          Length = 398

 Score =  498 bits (1282), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 313/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL ++ VP++KGV +     A++A KTL GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLHEFGVPISKGVPVLRPEDADAAAKTLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +  R++LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVNTFARQMLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ ST+GG++IE+VA + P+KI    +DP  GV      ++   L+L 
Sbjct: 121 SLLVDRETSKVAFVVSTEGGVNIEDVAHETPEKIVTFSVDPATGVMGHHGRAVAKALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM++LEINPL++ K G+LRVLD+K+SFD NAL++H ++ 
Sbjct: 181 GDLAKQAEKLTTQLYNAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNALFKHPEVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGMEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I+ESGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397


>gi|126726904|ref|ZP_01742743.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
           HTCC2150]
 gi|126703862|gb|EBA02956.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
           HTCC2150]
          Length = 397

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/397 (63%), Positives = 313/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVAKG  I+++  AE+AI +LPGP++VVKSQIHAGGRGKG+F 
Sbjct: 1   MNIHEYQAKEILKGFGAPVAKGAAITALADAEAAIASLPGPVWVVKSQIHAGGRGKGKFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVRV  S +  +++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELAADAKGGVRVSFSAEEALANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G  +F+AST+GGMDIE VA+D P+ I  + I    G T  D   L D  EL 
Sbjct: 121 SILVDRETGQTSFVASTEGGMDIEAVAEDTPELIHTVGIKASTGCTDADAEKLADAYELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR  G  LF  LY+AF  KDM+LLEINPLI+ K+  ++VLD+K+SFD NAL+RH D+ 
Sbjct: 181 GTAREQGMSLFKTLYEAFTSKDMALLEINPLIVTKSNDIQVLDAKVSFDGNALFRHPDLM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD++EED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDII LYG +PANFLDVG
Sbjct: 241 EYRDITEEDEKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIINLYGASPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIITSD  VKGIL+NIFGGIMRCDV+ +G++ AVK+V + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVVQAVKDVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G  V  G  +I +SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTKVQEGKDIINQSGLNVIAADDLDDAAQKIVKAVKG 397


>gi|75674618|ref|YP_317039.1| succinyl-CoA synthetase subunit beta [Nitrobacter winogradskyi
           Nb-255]
 gi|123614178|sp|Q3SVK4|SUCC_NITWN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|74419488|gb|ABA03687.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrobacter
           winogradskyi Nb-255]
          Length = 399

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/398 (62%), Positives = 308/398 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR++ VPV++GV +     AE+A +TL GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLREFGVPVSRGVPVLQASEAEAAAETLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +   ++LG+TL+T QTGP G +VN +Y+E+G+DI +E Y 
Sbjct: 61  EASAGEKGGVRLARSIDEVKTFAGQMLGATLVTAQTGPAGKQVNRLYIEEGSDIDKEFYF 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  ++F+ ST+GGM+IEEVA   P+KI    +DP  GV S    ++   L L+
Sbjct: 121 SALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPATGVMSHHGRTVARALRLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  +DM++LEINPL++ K G LRVLD+KISFD NALYRH D+ 
Sbjct: 181 GDLGKQAEKLVTQLYDAFIARDMAMLEINPLVVTKQGELRVLDAKISFDSNALYRHSDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA + +LSY+ALDG IGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDESEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +VKGILINIFGGIM+CDV+  G+++AVK+V +N+PLV+RLE
Sbjct: 301 GGATKDKVAAAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD G ++I ESGLNV+ A DLDDAAQKIV AVK V
Sbjct: 361 GTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKAVKEV 398


>gi|92116165|ref|YP_575894.1| succinyl-CoA synthetase subunit beta [Nitrobacter hamburgensis X14]
 gi|122418688|sp|Q1QQR3|SUCC_NITHX RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91799059|gb|ABE61434.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrobacter
           hamburgensis X14]
          Length = 397

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/397 (62%), Positives = 309/397 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR++ VPV++GV +     AE+A +TL GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLREFGVPVSRGVPVLKASEAEAAAETLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V     ++LG+TL+T QTGP G +VN +Y+E+G+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKQFASQMLGATLVTVQTGPAGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  VAF+ ST+GG++IE+VA   P+KI    +DP  GV S    ++   L L+
Sbjct: 121 SALVDRETSRVAFVVSTEGGVNIEDVAHTSPEKIVSFSVDPATGVMSHHGRTVAKALGLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM+LLEINPL++ + G LRVLD+K+SFDDNALYRH D  
Sbjct: 181 GDLGKQAEKLVAQLYNAFIAKDMALLEINPLVVTRQGELRVLDAKVSFDDNALYRHPDAV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA + +LSY+ALDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 241 ALRDESEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVK+V +N+PLV+RLE
Sbjct: 301 GGATKDKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKQVGLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G ++I ESGLNV+ A DLDDAAQKIV AVKG
Sbjct: 361 GTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397


>gi|158425639|ref|YP_001526931.1| succinyl-CoA synthetase beta subunit [Azorhizobium caulinodans ORS
           571]
 gi|158332528|dbj|BAF90013.1| succinyl-CoA synthetase beta subunit [Azorhizobium caulinodans ORS
           571]
          Length = 400

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 240/396 (60%), Positives = 309/396 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PV++GV + +V  AE+A + L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKTYGAPVSRGVPVLAVGEAEAAARELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++ V + + ++LG+TL+T QTGP G +VN +Y+E+G+DI  E YL
Sbjct: 61  EPEAGDKGGVRLARSVEEVKTFVEQMLGNTLVTVQTGPAGKQVNRLYIEEGSDIETEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR++  V+F+ ST+GGMDIEEVA   P+KI    +DP  G+ +     + D L L 
Sbjct: 121 SLLVDRSTSRVSFVVSTEGGMDIEEVAHSTPEKIVSFSVDPASGIQAFHGRKVADALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G L   LY AF D DM++LEINPLI+ K+ +L+VLD+K++FD NAL+RH D+ 
Sbjct: 181 GDLAKQAGKLTEVLYTAFTDTDMAMLEINPLIVTKDAKLKVLDAKVTFDSNALFRHPDLL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIM+CDV+ +G+L+AV  V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITSDPNVKGILVNIFGGIMKCDVIARGVLAAVTAVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I +SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEQGKQIIRDSGLNVIPADDLDDAAQKIVAAVK 396


>gi|304394262|ref|ZP_07376185.1| succinyl-CoA ligase [ADP-forming] subunit beta [Ahrensia sp.
           R2A130]
 gi|303293702|gb|EFL88079.1| succinyl-CoA ligase [ADP-forming] subunit beta [Ahrensia sp.
           R2A130]
          Length = 397

 Score =  494 bits (1273), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 250/397 (62%), Positives = 315/397 (79%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  +  P+A+GV I +    ++AI+ LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLAGFGAPIAQGVPIMTAADVDAAIEALPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELP D+KGGVR+  S   V S + E+LG+TL+TKQTGP G +VN +Y+EDGADI RELY 
Sbjct: 61  ELPEDAKGGVRLAFSPDEVRSHVAEMLGNTLVTKQTGPEGKQVNRLYLEDGADIDRELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LV+R +G V+F+AST+GGMDIE VA++ P+KI  + ID   GVT  +VASL    +L 
Sbjct: 121 SILVNRETGKVSFVASTEGGMDIETVAEETPEKIHTIDIDHSAGVTDANVASLVSAFDLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +   LF  LYKAF D DM++LE+NPLI+M+NG LRVLD+K+SFD NA +R  DIQ
Sbjct: 181 GTAADEAPTLFRQLYKAFTDTDMAMLEVNPLIVMENGSLRVLDAKVSFDGNAEFRQADIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDDKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIIT+D  VKGIL+NIFGGIMRCD + +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITADPKVKGILVNIFGGIMRCDTIAEGVVTAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G  V+ G  ++  S ++V+ A DLDDAAQKIV AVKG
Sbjct: 361 GTKVEEGKAILNGSDVDVVAADDLDDAAQKIVKAVKG 397


>gi|27375566|ref|NP_767095.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium japonicum USDA
           110]
 gi|81740313|sp|Q89X60|SUCC_BRAJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|27348703|dbj|BAC45720.1| succinyl-CoA synthetase beta chain [Bradyrhizobium japonicum USDA
           110]
          Length = 398

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 312/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL ++ VP++KGV +     AE+A K LPGP+YVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLGEFGVPISKGVPVLKAADAEAAAKALPGPVYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S   V    +++LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQVNRLYIEDGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V+F+ ST+GG++IE+VA + P+KI    +DP  G+      ++ + L+L 
Sbjct: 121 SLLVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPATGIMGHHGRTVANALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDMS+LEINPL++ K G+LRVLD+K+SFDDNAL+RH ++ 
Sbjct: 181 GDLAKQAEKLTAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+ +AV+EV +++PLV+RLE
Sbjct: 301 GSASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIILESGLNVVPADNLDDAAQKIVKAVKG 397


>gi|148252001|ref|YP_001236586.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. BTAi1]
 gi|189046888|sp|A5E936|SUCC_BRASB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146404174|gb|ABQ32680.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bradyrhizobium
           sp. BTAi1]
          Length = 398

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/397 (59%), Positives = 311/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL ++ VP++KGV +     +++A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLHEFGVPISKGVPVLRPEDSDAAAKALGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +  +++LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVNAFAKQMLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ ST+GG++IE+VA   P+KI    +DP  GV      ++   L+L 
Sbjct: 121 SLLVDRETSKVAFVVSTEGGVNIEDVAHSTPEKIITFSVDPATGVMPHHGRAVAKALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM++LEINPL++ K G+LRVLD+K+SFD NAL++H ++ 
Sbjct: 181 GDLAKQAEKLTIQLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNALFKHPEVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGMEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I+ESGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397


>gi|254512833|ref|ZP_05124899.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
 gi|221532832|gb|EEE35827.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
          Length = 379

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/379 (64%), Positives = 308/379 (81%)

Query: 19  VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKS 78
           +A GV I+S+  AE+AI  LPGP++VVKSQIHAGGRGKG+FKELP D+KGGVRV  S + 
Sbjct: 1   MAAGVPITSLDEAEAAINALPGPVWVVKSQIHAGGRGKGKFKELPEDAKGGVRVSFSPEE 60

Query: 79  VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQ 138
            + +I+E+ G+TL+TKQTGP+G +VN +Y+E GA I RELYLSLLV+R +GM +F+AST+
Sbjct: 61  AMDNIKEMFGNTLVTKQTGPSGKQVNRLYIESGAAIDRELYLSLLVNRETGMTSFVASTE 120

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAF 198
           GGMDIE VA++ P  I  + I P  G T +D A L D L+L G A+    +LF NLY AF
Sbjct: 121 GGMDIETVAEETPDLIHTVDITPSQGCTDQDAAKLADALKLDGTAKTQAVELFKNLYTAF 180

Query: 199 CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQH 258
            +KDMSLLEINPLI+ ++  ++VLD+K+SFD+NAL+RH D+QELRD++EED +EI+A ++
Sbjct: 181 AEKDMSLLEINPLIVTESNDMQVLDAKVSFDNNALFRHSDVQELRDLTEEDEKEIQASKY 240

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSD 318
           +LSYIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVGGGA  +KV  AFKIIT+D
Sbjct: 241 DLSYIALDGEIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATTEKVTEAFKIITAD 300

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
            +VKGIL+NIFGGIMRCDV+ +G++ AVK+V + +PLV+RLEG  V+ G ++I ESGLNV
Sbjct: 301 PNVKGILVNIFGGIMRCDVIAEGVVEAVKQVGLPVPLVVRLEGTKVNEGKKIINESGLNV 360

Query: 379 ITAIDLDDAAQKIVHAVKG 397
           I A DLDDAAQKIV AVKG
Sbjct: 361 IAADDLDDAAQKIVKAVKG 379


>gi|170747353|ref|YP_001753613.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653875|gb|ACB22930.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 398

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/397 (60%), Positives = 300/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I +   AE+A K L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVAIFNPSEAEAAAKELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P  +KGGVRV  S+  V     E+LG TL+T QTGP G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPEGAKGGVRVTKSIDEVKQFAGEMLGQTLVTIQTGPAGKQVNRLYIEEGAQIAEEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE VA D P+KI  + +DP  GV      ++   L L 
Sbjct: 121 SMLVDRATGGVAFVVSTEGGMDIEAVAHDTPEKIHTIAVDPATGVMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDMSLLEINPL++  +G L+ LD+K++FD NALYRH DI 
Sbjct: 181 GAQAKEAAALTEKLYAAFVAKDMSLLEINPLVLTADGHLKCLDAKMAFDSNALYRHADIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIIRNSGLNVIPADDLDDAAQKIVAAVKG 397


>gi|90421717|ref|YP_530087.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           BisB18]
 gi|122477686|sp|Q21CW8|SUCC_RHOPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|90103731|gb|ABD85768.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisB18]
          Length = 399

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/396 (59%), Positives = 303/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+ + V ++KGV I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLQPFGVSLSKGVAILKATDAEAAAKQLGGPIWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++ V     E+LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIEEVKQYAAEMLGATLVTIQTGPAGKQVNRLYIEDGSDIEKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM+IE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SLLVDRVTSRISFVVSTEGGMNIEDVAHDTPEKIISFSVDPATGIMGHHGRTVAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM +LEINPL++ K G L+ LD+K+SFD NALYRH DI 
Sbjct: 181 GDLAKQAERLVAQLYAAFISKDMEMLEINPLVVTKQGELKCLDAKMSFDGNALYRHPDIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKIIT+D +VKGILINIFGGIM+CD++ +G+++AVK+V + +PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKDVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I ESGLNV++A DLDDAAQKIV AVK
Sbjct: 361 GTNVEAGKKIIQESGLNVLSADDLDDAAQKIVKAVK 396


>gi|298292944|ref|YP_003694883.1| succinyl-CoA synthetase subunit beta [Starkeya novella DSM 506]
 gi|296929455|gb|ADH90264.1| succinyl-CoA synthetase, beta subunit [Starkeya novella DSM 506]
          Length = 399

 Score =  488 bits (1255), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/396 (60%), Positives = 300/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR+Y VPV  GV I     A++A   +PGP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKGVLREYGVPVPNGVAILDAAEADAAAAKIPGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVRV  S     ++ ++ILG TL+T QTGP G +VN VY+E+G+DI +E YL
Sbjct: 61  EADAGEKGGVRVVKSAGEAAANAKQILGKTLVTVQTGPAGKQVNRVYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  VAF+ ST+GGMDIEEVA   P+KI    IDP  GV      ++   L L 
Sbjct: 121 SALVDRATSRVAFVVSTEGGMDIEEVAHSTPEKIHTFSIDPATGVMPHHGRTVAQALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G+L   LY AF  KDM++LE+NPL++ K G L+ LD+KISFD N+LYRH D+ 
Sbjct: 181 GDLAKQAGNLVTKLYAAFVGKDMAMLEVNPLVVTKGGELKCLDAKISFDSNSLYRHPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGATEEKVTAAFKIITADPQVQGILVNIFGGIMKCDVIARGVIAAVKAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I +SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKQIIRDSGLNVIPADDLDDAAQKIVKAVK 396


>gi|254488451|ref|ZP_05101656.1| succinyl-CoA synthase, beta subunit [Roseobacter sp. GAI101]
 gi|214045320|gb|EEB85958.1| succinyl-CoA synthase, beta subunit [Roseobacter sp. GAI101]
          Length = 397

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/397 (60%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKNAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTARVGFVCSTEGGMDIEEVAESTPEKIISFSVDPATGFQPFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYKAF DKDM +LEINPLI+  +G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GKQVKQCVTLMGQLYKAFTDKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNAMYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEQGKEIIKNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|86747406|ref|YP_483902.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           HaA2]
 gi|123409066|sp|Q2J3G9|SUCC_RHOP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|86570434|gb|ABD04991.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 398

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 304/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV+ G  I     AE+A   L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVPVSHGYPIFKASEAEAAATKLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +   ++L +TL+T QTGP G +VN +Y+E+G++I +E YL
Sbjct: 61  EASAGDKGGVRLAKSVDEVKTYAEQMLHATLVTVQTGPAGKQVNRLYIEEGSEIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA D P+KI    +DP  G+ S    ++ + L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPATGIMSHHGRAVANALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM +LEINPL++ K G L+ LD+K+SFD N+LYRH DIQ
Sbjct: 181 GDQAKQAESLVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNSLYRHADIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 GLRDESEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CD++ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV+AVKG
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVNAVKG 397


>gi|304321621|ref|YP_003855264.1| SucC, succinyl-CoA synthetase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300523|gb|ADM10122.1| SucC, succinyl-CoA synthetase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 396

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 252/395 (63%), Positives = 304/395 (76%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y  PVA G ++     A +A + LPGPLYVVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKDLLKSYGAPVAAGAIVLDADDAATAAQGLPGPLYVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  ++    + ++ +LG TL+TKQTG  G  V  VY+EDGADI RELYL
Sbjct: 61  EAEAGEKGGVRLAKTVDDAAAQVKAMLGHTLVTKQTGDEGKVVGRVYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G VAFIAST+GGMDIEEVA   P+KI  L IDP  G+T+ED   L + L+L+
Sbjct: 121 SLLVDRGTGKVAFIASTEGGMDIEEVAASTPEKILTLPIDP-AGMTAEDAIKLVEALKLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  L P LY AF +KDMS+LEINPLI+M +G LRVLD+K+ FD NA +RH DI+
Sbjct: 180 GAAREDGLKLMPILYTAFVEKDMSMLEINPLIVMTDGHLRVLDAKVGFDPNASFRHPDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD SEED  E  A + +LSYI LDGNIGCMVNGAGLAMATMDI+K YG  PANFLDVG
Sbjct: 240 QLRDESEEDPLERRASEFDLSYIKLDGNIGCMVNGAGLAMATMDIVKHYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  V+GIL+NIFGGIM+CDV+ +G+++AVKE  + +PLV+RLE
Sbjct: 300 GGATKEKVTEAFKIITSDPGVEGILVNIFGGIMKCDVIAEGVIAAVKETGLKVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G ++I ESGL+VI A DLDDAA+KIV AV
Sbjct: 360 GTNVDAGKKIINESGLDVIAADDLDDAAKKIVAAV 394


>gi|119383311|ref|YP_914367.1| succinyl-CoA synthetase subunit beta [Paracoccus denitrificans
           PD1222]
 gi|189081763|sp|A1AZH7|SUCC_PARDP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119373078|gb|ABL68671.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Paracoccus
           denitrificans PD1222]
          Length = 397

 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/397 (60%), Positives = 300/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR+Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++      R++LG TL+T QTG TG +VN +Y+EDG+DI RELYL
Sbjct: 61  EKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+AST+GGMDIEEVA   P+KI    +DP  G++      +   L L 
Sbjct: 121 ALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+ F +KDM +LEINPLI+MK+G L+ LD+K+ FD+NALYR  DI 
Sbjct: 181 GAQVKQCVALVKNLYRMFIEKDMEMLEINPLIVMKDGNLKALDAKMGFDNNALYRQPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKL+G  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLFGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DL DAAQKIV AVKG
Sbjct: 361 GTNVELGKQIIGESGLNVIAADDLSDAAQKIVKAVKG 397


>gi|16124592|ref|NP_419156.1| succinyl-CoA synthetase subunit beta [Caulobacter crescentus CB15]
 gi|221233279|ref|YP_002515715.1| succinyl-CoA synthetase subunit beta [Caulobacter crescentus
           NA1000]
 gi|21264045|sp|Q9AB94|SUCC_CAUCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778434|sp|B8GYZ1|SUCC_CAUCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|13421486|gb|AAK22324.1| succinyl-CoA synthetase, beta subunit [Caulobacter crescentus CB15]
 gi|220962451|gb|ACL93807.1| succinyl-CoA synthetase beta chain [Caulobacter crescentus NA1000]
          Length = 399

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/397 (59%), Positives = 301/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++  PV +G    +   A +A + L GP++VVKSQIHAGGRGKG+F+
Sbjct: 1   MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S++ V S+  E+LG  L+T QTGP G +VN +Y+E+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  V+ +AST+GGMDIE+VA   P+KI    IDP  GV      +L   L L 
Sbjct: 121 SLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDM++LEINPLI+  +  LRVLD+K+SFD N+L+RH DI+
Sbjct: 181 GGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFRHPDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I+ESGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKKIISESGLNVIAANDLSDGAEKIVAAVKG 397


>gi|295691153|ref|YP_003594846.1| succinyl-CoA synthetase subunit beta [Caulobacter segnis ATCC
           21756]
 gi|295433056|gb|ADG12228.1| succinyl-CoA synthetase, beta subunit [Caulobacter segnis ATCC
           21756]
          Length = 399

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 301/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++  PV +G    +   A +A + L GP++VVKSQIHAGGRGKG+F+
Sbjct: 1   MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S++ V ++  E+LG  L+T QTGP G +VN +Y+E+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVEEVKTNAAEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  V+ +AST+GGMDIE+VA   P+KI    IDP  GV      +L   L L 
Sbjct: 121 SLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHQRALAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDM++LEINPLI+  +  LRVLD+K+SFD N+L+RH DI+
Sbjct: 181 GGLAKEAASLLTQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFRHPDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I+ESGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKKIISESGLNVIAANDLSDGAEKIVAAVKG 397


>gi|126730338|ref|ZP_01746149.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
 gi|126709071|gb|EBA08126.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
          Length = 397

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 298/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGALDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+DI RELYL
Sbjct: 61  EADAGEKGGVRLAKSVEEAAEEAKKMLGKTLVTHQTGPAGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPFHGRRIAFALGLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     L   LYKAF +KDM +LEINPLI++K+G L+VLD+K+ FD NALYR  ++ 
Sbjct: 181 KAGQKHCVKLMGILYKAFVEKDMEMLEINPLIVLKDGTLKVLDAKLGFDGNALYRQAEVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EEDS+E++A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDETEEDSKELQASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAADDLKDGAEKIVKAVKG 397


>gi|154244447|ref|YP_001415405.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
 gi|154158532|gb|ABS65748.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
          Length = 410

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/396 (60%), Positives = 305/396 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+++ VPV++G+   +   AE+A   L G  +VVK+QIHAGGRGKG+FK
Sbjct: 11  MNIHEYQAKALLKEFGVPVSRGLAAFTPQDAEAAAAKLGGIAFVVKAQIHAGGRGKGKFK 70

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPA++KGGVRV  +   V ++  E+LG+TL+T QTGP G +VN +Y+E+GA I +E YL
Sbjct: 71  ELPAEAKGGVRVVKTAADVKANAAEMLGNTLVTIQTGPDGKQVNRLYIEEGASIDKEFYL 130

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  VAF+ ST+GGMDIEEVA   P++I    +DP  GV       +   L L 
Sbjct: 131 SMLVDRATARVAFVVSTEGGMDIEEVAHATPERIVTFSVDPATGVQPLHGRKVAQALGLS 190

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+AF DKDMSLLEINPL++ ++ RL  LD+K+ FD NAL+RH ++ 
Sbjct: 191 GDLAKQAVALTANLYRAFTDKDMSLLEINPLVLTRDDRLVCLDAKVGFDSNALFRHPEVV 250

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD SEED +EIEA +++LSYIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 251 QLRDESEEDFKEIEASRYDLSYIALDGTIGCMVNGAGLAMATMDIIKLYGREPANFLDVG 310

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIMRCDV+ +G+++AV+++ +N+PLV+RL 
Sbjct: 311 GGATKEKVTAAFKIITADPNVEGILVNIFGGIMRCDVIAEGVIAAVRQMGLNVPLVVRLA 370

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I ESGLNVI A DLDDAAQKIV AVK
Sbjct: 371 GTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAAVK 406


>gi|114764881|ref|ZP_01444063.1| succinyl-CoA synthetase subunit beta [Pelagibaca bermudensis
           HTCC2601]
 gi|114542767|gb|EAU45790.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. HTCC2601]
          Length = 397

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G ++ + + A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRDYGCPVSDGRIVLTANDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    +   +LG TL+T QTGP G +VN +Y+EDG+DI  E YL
Sbjct: 61  EHEAGEKGGVRLAKSVEEAADEANRMLGHTLVTHQTGPAGKQVNRIYIEDGSDITSEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++ + ST+GGMDIEEVA   P+KI    IDP +G        +   L L+
Sbjct: 121 ALLVDRVTSRISIVCSTEGGMDIEEVAASTPEKILSFSIDPAVGYQGFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A     +L  NLY+ F DKDM +LEINPLI+   G ++ LD K  FD NALYRH DI 
Sbjct: 181 GKAVRQCSNLLGNLYRMFTDKDMEMLEINPLILTTEGEIKCLDCKAGFDSNALYRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A QH+L+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 241 GLRDETEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDDNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I ESGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVDLGKKIINESGLDVIAADNLSDGAEKIVKAVKG 397


>gi|146276136|ref|YP_001166295.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides ATCC
           17025]
 gi|189081782|sp|A4WNM6|SUCC_RHOS5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145554377|gb|ABP68990.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 397

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/397 (59%), Positives = 298/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A+SA   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+       +++LG TL+T QTGP+G +VN +Y+E+G+DI RELYL
Sbjct: 61  EPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPSGKQVNRIYIEEGSDIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G++      +   L L+
Sbjct: 121 ALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+AF +KDM +LEINPLI+M +G L+VLD+K+ FD+NALYR  DI 
Sbjct: 181 GAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYRQPDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI   +L DAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKAVKG 397


>gi|188580840|ref|YP_001924285.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
           BJ001]
 gi|179344338|gb|ACB79750.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
           BJ001]
          Length = 398

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/396 (60%), Positives = 298/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I     A +A   L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVAIFKPEEAAAAADELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             PA +KGGVRV  S   V+   RE+LG TL+T QTG  G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPAGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQVNRLYIEEGASIASEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    + G L   LY AF  KDMS+LEINPL++  +G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPQAKEAGALTEKLYAAFTAKDMSMLEINPLVLTGDGHLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKEIIRTSGLNVIPADDLDDAAQKIVAAVK 396


>gi|77464547|ref|YP_354051.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides
           2.4.1]
 gi|126463387|ref|YP_001044501.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides ATCC
           17029]
 gi|221640458|ref|YP_002526720.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides
           KD131]
 gi|332559440|ref|ZP_08413762.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides WS8N]
 gi|123590983|sp|Q3IZ84|SUCC_RHOS4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081781|sp|A3PN13|SUCC_RHOS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778449|sp|B9KNB3|SUCC_RHOSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77388965|gb|ABA80150.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|126105051|gb|ABN77729.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161239|gb|ACM02219.1| Succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides KD131]
 gi|332277152|gb|EGJ22467.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides WS8N]
          Length = 397

 Score =  481 bits (1238), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/397 (59%), Positives = 297/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A+SA   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+       +++LG TL+T QTGP G +VN +Y+E+G+DI RELYL
Sbjct: 61  EPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G++      +   L L+
Sbjct: 121 ALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+AF +KDM +LEINPLI+M +G L+VLD+K+ FD+NALYR  D+ 
Sbjct: 181 GAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYRQSDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI   +L DAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKAVKG 397


>gi|294676277|ref|YP_003576892.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rhodobacter
           capsulatus SB 1003]
 gi|294475097|gb|ADE84485.1| succinyl-CoA synthetase (ADP-forming), beta subunit [Rhodobacter
           capsulatus SB 1003]
          Length = 397

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 298/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y  PV+ G ++      ++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKQLLKSYGCPVSNGRIVLKADEVKAAASELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+    +  R++LG TL+T QTGP G +VN +Y+E+G+DI RELYL
Sbjct: 61  EAEAGEKGGVRLARSVAEAETLARQMLGRTLVTHQTGPAGKQVNRIYIEEGSDISRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR S  V+F+ ST+GGMDIEEVA   P+KI    +DP  G++      +   L L+
Sbjct: 121 ALLIDRKSSRVSFVCSTEGGMDIEEVAAHTPEKILSFSVDPATGLSDFHGRRIAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+  +G+L+VLD+K+ FD+NALYR  D+ 
Sbjct: 181 GNQVKQCVSLIKKLYKAFLEKDMEMLEINPLIVTTDGQLKVLDAKLGFDNNALYRQPDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRDV+EED +E+EA + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 DLRDVTEEDPKELEASRFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCD++ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPKVKGILVNIFGGIMRCDIIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  +IA+SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKDIIAKSGLNVIAADDLADGAKKIVAAVKG 397


>gi|99078490|ref|YP_611748.1| succinyl-CoA synthetase subunit beta [Ruegeria sp. TM1040]
 gi|99035628|gb|ABF62486.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ruegeria sp.
           TM1040]
          Length = 397

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVMKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRVTSRVSFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQAYHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  NG L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYQAFIEKDMEMLEINPLIVADNGDLKVLDAKVGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAADDLSDGAEKIVKAVKG 397


>gi|163744276|ref|ZP_02151636.1| succinyl-CoA synthase, beta subunit [Oceanibulbus indolifex HEL-45]
 gi|161381094|gb|EDQ05503.1| succinyl-CoA synthase, beta subunit [Oceanibulbus indolifex HEL-45]
          Length = 397

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+DI RELYL
Sbjct: 61  EAGAGEKGGVRLTKSVEEAAEEAKKMLGKTLVTHQTGPAGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVADATPEKILSFSVDPATGYQPFHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      L   LY+AF +KDM +LEINPLI+M    L+VLD+K+SFD NA+YR  D+ 
Sbjct: 181 GTAVKQCVKLMGQLYQAFIEKDMEMLEINPLIVMPGNDLKVLDAKVSFDGNAMYRQPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 NLRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDENVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|220921132|ref|YP_002496433.1| succinyl-CoA synthetase subunit beta [Methylobacterium nodulans ORS
           2060]
 gi|219945738|gb|ACL56130.1| succinyl-CoA synthetase, beta subunit [Methylobacterium nodulans
           ORS 2060]
          Length = 398

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/396 (59%), Positives = 302/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ +PV+ G  I     AE+A + L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGLPVSNGKAIFKAAEAEAAARELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++ V +   ++LG TL+T QTG  G +VN +Y+E+G+DI  E YL
Sbjct: 61  EPEAGEKGGVRLAKSVEEVKTFAEQMLGRTLVTVQTGEAGKQVNRLYIEEGSDIETEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALRLA 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  DL   LY+AF  KDMS+LEINPLI+ K+G L+ LD+KISFD N+LYRH +I 
Sbjct: 181 GPLAKEAEDLTARLYRAFVAKDMSMLEINPLIVTKDGHLKCLDAKISFDSNSLYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +EIEA +++L+YIAL+G IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 QLRDTTEEDEKEIEASKYDLAYIALEGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AV+ V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVRAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AV+
Sbjct: 361 GTNVEKGKEIIRSSGLNVIPADDLDDAAQKIVAAVR 396


>gi|260425789|ref|ZP_05779769.1| succinyl-CoA synthetase beta chain [Citreicella sp. SE45]
 gi|260423729|gb|EEX16979.1| succinyl-CoA synthetase beta chain [Citreicella sp. SE45]
          Length = 397

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/397 (59%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G ++ + + A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRDYGCPVSDGRIVLTANDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    +   +LG TL+T QTGP G +VN +Y+EDG+DI  E YL
Sbjct: 61  ESEAGEKGGVRLAKSVEEAAEEANRMLGHTLVTHQTGPAGKQVNRIYIEDGSDITSEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+ + ST+GGMDIEEVA   P+KI    IDP +G        +   L L 
Sbjct: 121 ALLVDRVTSRVSIVCSTEGGMDIEEVAASTPEKILSFSIDPAVGYQGFHGRRVAFALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +L  NLY+ F +KDM +LEINPLI+  +G L+ LD K  FD NALYRH DI 
Sbjct: 181 GKQIRQCTNLLSNLYRMFVEKDMEMLEINPLIVTTDGDLKCLDCKAGFDGNALYRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A QH+L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 GLRDETEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVLAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G  +IA SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVDLGKEIIANSGLNVIAADNLSDGAEKIVKAVKG 397


>gi|197103624|ref|YP_002129001.1| succinyl-CoA synthetase, beta subunit sucC [Phenylobacterium
           zucineum HLK1]
 gi|226734970|sp|B4RCH3|SUCC_PHEZH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|196477044|gb|ACG76572.1| succinyl-CoA synthetase, beta subunit sucC [Phenylobacterium
           zucineum HLK1]
          Length = 399

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++ V V +G    SV  A  A + L GP++VVKSQIHAGGRGKGRF+
Sbjct: 1   MNIHEHQAKAVLAEFGVAVPRGYPAFSVDEAVQAAEKLGGPVFVVKSQIHAGGRGKGRFE 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S+  V ++  E+LG  L+T QTG  G +VN +Y+E+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVDEVKANAEEMLGRVLVTHQTGAAGKQVNRLYIEEGAQIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V+ +AST+GGMDIEEVA   P+KI    IDP  GV       L   L L 
Sbjct: 121 SLLVDRETSWVSVVASTEGGMDIEEVAHATPEKIVTFSIDPATGVFPHHGRHLAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDMS+LEINPLI+  +  LRVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GGLAKEAATLLNQLYAAFLAKDMSMLEINPLIVTGDDHLRVLDAKVSFDSNALFRHADVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++LSYIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDIIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I ESGLNVI A DL D A+KIV AV+G
Sbjct: 361 GTNVDLGKKIINESGLNVIAANDLSDGAEKIVKAVRG 397


>gi|170740403|ref|YP_001769058.1| succinyl-CoA synthetase subunit beta [Methylobacterium sp. 4-46]
 gi|168194677|gb|ACA16624.1| succinyl-CoA synthetase, beta subunit [Methylobacterium sp. 4-46]
          Length = 398

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/396 (60%), Positives = 301/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV+ G  I     AE+A + L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSNGKAIFKAAEAEAAARELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +   ++LG TL+T QTG  G +VN +Y+EDG+DI  E YL
Sbjct: 61  EAKAGEKGGVRLAKSIDEVKTFAEQMLGRTLVTVQTGEAGKQVNRLYIEDGSDIDTEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VA++ ST+GGMDIE+VA D P+KI    +DP  GV      ++   L L 
Sbjct: 121 SMLVDRATGRVAYVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGVMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  DL   LY+AF  KDMS+LEINPLI+ K+G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPLAKEAEDLTARLYQAFTAKDMSMLEINPLIVTKDGHLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +EIEA +++L+YIAL+G IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 QLRDTTEEDEKEIEASKYDLAYIALEGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AV+
Sbjct: 361 GTNVEKGKEIIRSSGLNVIPADDLDDAAQKIVAAVR 396


>gi|254466420|ref|ZP_05079831.1| succinyl-CoA synthetase, beta subunit [Rhodobacterales bacterium
           Y4I]
 gi|206687328|gb|EDZ47810.1| succinyl-CoA synthetase, beta subunit [Rhodobacterales bacterium
           Y4I]
          Length = 397

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I RELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQPYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       L   LYKAF +KDM +LEINPLII  +G L+VLD+K+ FD NA+YRH D+ 
Sbjct: 181 GQQVKQCVKLMGQLYKAFVEKDMEMLEINPLIIADDGNLKVLDAKVGFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKAVKG 397


>gi|163734161|ref|ZP_02141602.1| succinyl-CoA synthase, beta subunit [Roseobacter litoralis Och 149]
 gi|161392697|gb|EDQ17025.1| succinyl-CoA synthase, beta subunit [Roseobacter litoralis Och 149]
          Length = 397

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E+ A  KGGVR+  S+     + +++LG TL+T QTGP G +VN +Y+EDGA I  ELYL
Sbjct: 61  EVDAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGAGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF +KDM +LEINPLI+  +G L+VLD+K++FD NA+YRH DI 
Sbjct: 181 GKQVKQCVGLMGLLYNAFMEKDMEMLEINPLIVTDSGDLKVLDAKVAFDGNAMYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRDV+EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDVTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV  G  +I  SGL+VI A +L D AQKIV AVKG
Sbjct: 361 GTNVQQGKDIINNSGLDVIAADNLKDGAQKIVKAVKG 397


>gi|299133570|ref|ZP_07026764.1| succinyl-CoA synthetase, beta subunit [Afipia sp. 1NLS2]
 gi|298591406|gb|EFI51607.1| succinyl-CoA synthetase, beta subunit [Afipia sp. 1NLS2]
          Length = 398

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 307/397 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ VPV+KG+ I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEFGVPVSKGIPILKASDAEAAAKELGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V + ++++LG+TL+T QTGP G +VN +Y+E+GADI +E YL
Sbjct: 61  EASAGDKGGVRLAKSVDEVKTFVQQMLGATLVTVQTGPVGKQVNRLYLEEGADIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  +AF+ ST+GGMDIE+VA D P+KI    +DP  G+       +   L+L+
Sbjct: 121 SALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDMS+LEINPLI+ K G LR LD+K+SFD NA+YRH D+ 
Sbjct: 181 GDQAKQAESLVSKLYAAFVAKDMSMLEINPLILSKQGELRCLDAKVSFDSNAIYRHPDVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I ESGLNV+ A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397


>gi|115522327|ref|YP_779238.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           BisA53]
 gi|122297981|sp|Q07UX6|SUCC_RHOP5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115516274|gb|ABJ04258.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 399

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/396 (59%), Positives = 304/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+ + V ++KGV I     AE+A K LPGP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLQPFGVSLSKGVAILKASEAEAAAKQLPGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A S+GGVR+  S+  V    +E+LG+TL+T QTGP G +VN +Y+E+G+ I +E YL
Sbjct: 61  EASAGSQGGVRLAKSIDEVKQFAQEMLGATLVTLQTGPAGKQVNRLYIEEGSAIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V+F+ ST+GGM+IE+VA D P+KI    +DP  G+       +   L L 
Sbjct: 121 SLLVDRATSRVSFVVSTEGGMNIEDVAHDTPEKIISFSVDPATGIMPHHGRIVAKTLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G L   LY AF  KDM +LEINPL++ K+G LR LD+K+SFD N+LYR  D+ 
Sbjct: 181 GELAKQAGKLTTQLYTAFVAKDMEMLEINPLVLTKDGELRCLDAKMSFDSNSLYRQPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +H L+YIAL+G IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDTTEEDAKEIEASKHELAYIALEGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGATEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKTVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I +SGLNV++A DLDDAAQKIV+AVK
Sbjct: 361 GTNVEEGKAIIRDSGLNVLSADDLDDAAQKIVNAVK 396


>gi|89068133|ref|ZP_01155550.1| succinyl-CoA synthetase subunit beta [Oceanicola granulosus
           HTCC2516]
 gi|89046372|gb|EAR52429.1| succinyl-CoA synthetase subunit beta [Oceanicola granulosus
           HTCC2516]
          Length = 397

 Score =  478 bits (1230), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/397 (59%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A+SA   L GPL+VVK+QIHAGGRGKG F+
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRAVFRAEEAKSAAGELDGPLWVVKAQIHAGGRGKGSFQ 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + + +LG TL+T QTGP G +VN VY+EDG+DI RELYL
Sbjct: 61  EADAGDKGGVRLAKSVEEAAEEAKRMLGRTLVTHQTGPAGKQVNRVYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+AST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRVSFVASTEGGMDIEEVAASTPEKILSFSVDPATGYQPFHGRRIGFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      L   LYK F ++DM +LEINPLI+   G L+ LD+KI FD NALYR  DI 
Sbjct: 181 GAALKQCVKLMGTLYKMFVERDMEMLEINPLIVTDKGDLKCLDAKIGFDGNALYRQPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDAKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA+SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIIAQSGLNVIAADDLKDGAEKIVKAVKG 397


>gi|56695262|ref|YP_165610.1| succinyl-CoA synthetase subunit beta [Ruegeria pomeroyi DSS-3]
 gi|56676999|gb|AAV93665.1| succinyl-CoA synthase, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 397

 Score =  478 bits (1230), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I RELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPVGKQVNRIYIEAGSGIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP+ G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPVTGYQPYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+ + G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GPQVKQCVALMGLLYKAFVEKDMEMLEINPLIVAEGGSLKVLDAKVGFDGNAIYRHSDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397


>gi|91975016|ref|YP_567675.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           BisB5]
 gi|123749427|sp|Q13DR5|SUCC_RHOPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91681472|gb|ABE37774.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisB5]
          Length = 399

 Score =  478 bits (1230), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/398 (59%), Positives = 306/398 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV+ G  I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVPVSHGYPIFKASEAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V    +++L +TL+T QTGP G +VN +YVE+G++I +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKDYAQQMLHATLVTVQTGPAGKQVNRLYVEEGSEIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA D P+KI    +DP  G+ +    ++ + L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPATGIMAHHGRAVANTLGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF  KDM +LEINPL++ K G L+ LD+K+SFD NALYRH DIQ
Sbjct: 181 GEQAKQAESLVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNALYRHADIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CD++ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV+AVK V
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVNAVKQV 398


>gi|209885674|ref|YP_002289531.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
 gi|226734966|sp|B6JE33|SUCC_OLICO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|209873870|gb|ACI93666.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
          Length = 398

 Score =  478 bits (1230), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/397 (61%), Positives = 304/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ V V+KGV I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVSVSKGVPILKASDAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V   + ++LG TL+T QTGP G +VN +Y+E+GADI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKQFVDQMLGKTLVTVQTGPAGKQVNRLYLEEGADIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  +AF+ ST+GGMDIE+VA D P+KI    +DP  G+       +   L+L+
Sbjct: 121 SALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDMS+LEINPLI+ K G LR LD+KISFD NA+YRH D+ 
Sbjct: 181 GDQAKQAEKLVNQLYTAFIAKDMSMLEINPLILSKQGELRCLDAKISFDSNAIYRHPDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ELRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I ESGLNV+ A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397


>gi|260431531|ref|ZP_05785502.1| succinyl-CoA synthetase beta chain [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415359|gb|EEX08618.1| succinyl-CoA synthetase beta chain [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 397

 Score =  478 bits (1229), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRAVLRAEEAKTAAGELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN VY+E G+ I RELYL
Sbjct: 61  EPDAGDKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPEGKQVNRVYIEAGSGIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQPFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+ + G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GAQVKQCVRLMGILYKAFVEKDMEMLEINPLIVAEGGDLKVLDAKLSFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIINSSGLDVIAADNLDDAAQKIVKAVKG 397


>gi|163851071|ref|YP_001639114.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           PA1]
 gi|163662676|gb|ABY30043.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           PA1]
          Length = 398

 Score =  478 bits (1229), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/396 (60%), Positives = 297/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I     A +A   L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVPIFKPEEAAAAADELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P  +KGGVRV  S   V+   RE+LG TL+T QTG  G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPEGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQVNRLYIEEGASIAAEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    + G L   LY AF  KDMS+LEINPL++  +G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPQAKEAGALTEKLYAAFTAKDMSMLEINPLVLTGDGGLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKEIIRNSGLNVIPADDLDDAAQKIVAAVK 396


>gi|110678921|ref|YP_681928.1| succinyl-CoA synthetase subunit beta [Roseobacter denitrificans OCh
           114]
 gi|109455037|gb|ABG31242.1| succinyl-CoA synthase, beta subunit [Roseobacter denitrificans OCh
           114]
          Length = 397

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/397 (59%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+     + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF +KDM +LEINPLI+   G L+VLD+K++FD NA+YRH DI 
Sbjct: 181 GKQVKQCVGLMGLLYTAFMEKDMEMLEINPLIVTNTGDLKVLDAKVAFDGNAIYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV  G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVQQGKDIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|39933268|ref|NP_945544.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           CGA009]
 gi|192288619|ref|YP_001989224.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           TIE-1]
 gi|81564418|sp|Q6NDB7|SUCC_RHOPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734980|sp|B3Q760|SUCC_RHOPT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|39652893|emb|CAE25635.1| succinyl-coA synthetase beta chain [Rhodopseudomonas palustris
           CGA009]
 gi|192282368|gb|ACE98748.1| succinyl-CoA synthetase, beta subunit [Rhodopseudomonas palustris
           TIE-1]
          Length = 398

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 303/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV  G  I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVPVGHGFPIFKASEAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V    +++LG+TL+T QTG  G +VN +Y+E+G+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKEFAKQMLGATLVTVQTGADGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA + P+KI    +DP  G+      ++   L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHETPEKIVSFTVDPATGIMGHHGRTVAKALNLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LY AF  KDM +LEINPL++ K G L+ LD+KISFD NALYRH DIQ
Sbjct: 181 GEQAKQAEAMVAKLYTAFVAKDMDMLEINPLVLTKQGDLKCLDAKISFDGNALYRHTDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMSPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CDV+ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVAAVKG 397


>gi|218529901|ref|YP_002420717.1| succinyl-CoA synthetase subunit beta [Methylobacterium
           chloromethanicum CM4]
 gi|240138205|ref|YP_002962677.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           AM1]
 gi|254560765|ref|YP_003067860.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
           DM4]
 gi|218522204|gb|ACK82789.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           chloromethanicum CM4]
 gi|240008174|gb|ACS39400.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           AM1]
 gi|254268043|emb|CAX23914.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           DM4]
          Length = 398

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/396 (60%), Positives = 297/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I     A +A   L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVPIFKPEEAAAAADELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P  +KGGVRV  S   V+   RE+LG TL+T QTG  G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPEGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQVNRLYIEEGAAIAAEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    + G L   LY AF  KDMS+LEINPL++  +G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPQAKEAGALTEKLYAAFTAKDMSMLEINPLVLTGDGGLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKEIIRNSGLNVIPADDLDDAAQKIVAAVK 396


>gi|85706368|ref|ZP_01037462.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
 gi|85669141|gb|EAQ24008.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
          Length = 397

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV++G V+     A++A   L GP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSEGRVVLRGEEAKTAAGALDGPVWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+     + + +LG TL+T QTGP G +VN +Y+EDG+ I RELYL
Sbjct: 61  EAGAGEKGGVRIAKSVNEAAEEAKRMLGRTLVTHQTGPAGKQVNRIYIEDGSSIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L 
Sbjct: 121 ALLIDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFAVDPATGYMPFHGRRIAFALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  +G L VLD+K+ FD NA+YRH DI 
Sbjct: 181 GGQIKQCVSLMGILYRAFVEKDMEMLEINPLIVTTSGDLMVLDAKLGFDGNAVYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|149202191|ref|ZP_01879164.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149144289|gb|EDM32320.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 397

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV++G V+     A++A   L GP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSEGRVVLRGEEAKTAAGALDGPVWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+     + + +LG TL+T QTGP G +VN +Y+E+G+ I RELYL
Sbjct: 61  EAGAGEKGGVRIAKSVNEAAEEAKRMLGRTLVTHQTGPEGKQVNRIYIENGSAIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L 
Sbjct: 121 ALLIDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFAVDPATGYMPYHGRRIAFALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  +G L VLD+K+ FD NA+YRH DI 
Sbjct: 181 GGQIKQCVSLMGLLYRAFVEKDMEMLEINPLIVTTDGNLMVLDAKLGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|259415170|ref|ZP_05739092.1| succinyl-CoA synthetase beta chain [Silicibacter sp. TrichCH4B]
 gi|259349080|gb|EEW60834.1| succinyl-CoA synthetase beta chain [Silicibacter sp. TrichCH4B]
          Length = 397

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL  Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLSSYGAPVSDGRVVLKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRVTSRVSFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQPYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF DKDM +LEINPLI+   G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYQAFIDKDMEMLEINPLIVTDTGDLKVLDAKLGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAADDLSDGAQKIVKAVKG 397


>gi|83944440|ref|ZP_00956894.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. EE-36]
 gi|83844763|gb|EAP82646.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. EE-36]
          Length = 397

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGDKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRIGFVCSTEGGMDIEEVAESTPEKIISFSVDPAAGFQPYHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   L+KAF +KDM +LEINPLI+  +G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GKQVKQCVTLMGQLFKAFVEKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNAMYRHGDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 DLRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|83953481|ref|ZP_00962203.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. NAS-14.1]
 gi|83842449|gb|EAP81617.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. NAS-14.1]
          Length = 397

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 294/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGDKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRIGFVCSTEGGMDIEEVAESTPEKIISFSVDPAAGFQPYHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   L+KAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GKQVKQCVTLMGQLFKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRHGDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 DLRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|163738928|ref|ZP_02146341.1| succinyl-CoA synthetase subunit beta [Phaeobacter gallaeciensis
           BS107]
 gi|161387733|gb|EDQ12089.1| succinyl-CoA ligase [ADP-forming] subunit beta [Phaeobacter
           gallaeciensis BS107]
          Length = 397

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA+  P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       L   LYKAF +KDM +LEINPLI+  +G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GQQIKQCVRLMGQLYKAFVEKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNAVYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKDIINTSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|149913128|ref|ZP_01901662.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
 gi|149813534|gb|EDM73360.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
          Length = 397

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EPGAGEAGGVRLARSVEEAAEEAKRMLGRTLVTKQTGPAGKQVNRIYIEDGSDIEKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F AST+GGMDIEEVA+  P+KI    +DP  G        +  ML L+
Sbjct: 121 ALLVDRVTSRISFAASTEGGMDIEEVAEKTPEKILSFSVDPATGYQPFHGRRIAFMLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F DKDM +LEINPLII   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGILYQLFLDKDMEMLEINPLIITDKGDLKCLDAKMGFDSNAVYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIISNSGLDVIAADNLKDGAEKIVKAVKG 397


>gi|254476607|ref|ZP_05089993.1| succinyl-CoA synthetase, beta subunit [Ruegeria sp. R11]
 gi|214030850|gb|EEB71685.1| succinyl-CoA synthetase, beta subunit [Ruegeria sp. R11]
          Length = 397

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA+  P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLII  +G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVQLMGQLYKAFVEKDMEMLEINPLIIADDGNLKVLDAKVGFDGNAVYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKDIINNSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|84684234|ref|ZP_01012136.1| succinyl-CoA synthetase subunit beta [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667987|gb|EAQ14455.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
           HTCC2654]
          Length = 397

 Score =  475 bits (1222), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++    L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRDYGAPVSDGRVVMKAEEAKTKASELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EESAGEKGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPFHGRRIAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYK F ++DM +LEINPLI+   G L+VLD+K  FD NALYR  DI 
Sbjct: 181 GPQVKQCVSLMGTLYKVFTERDMEMLEINPLIVTDGGDLKVLDAKFGFDGNALYRQPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 NLRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  +IA SGLNVI A DL D AQKIV AVKG
Sbjct: 361 GTNVDKGKEIIANSGLNVIAADDLKDGAQKIVKAVKG 397


>gi|182680503|ref|YP_001834649.1| succinyl-CoA synthetase, beta subunit [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636386|gb|ACB97160.1| succinyl-CoA synthetase, beta subunit [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 410

 Score =  474 bits (1221), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/395 (59%), Positives = 290/395 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR +  PV+ G  + +   AE+A + LPGP+YV+K+QIHAGGRGKG FK
Sbjct: 11  MNIHEYQAKAILRDFGAPVSHGAPVLTPGEAEAAARALPGPVYVIKAQIHAGGRGKGHFK 70

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  SL  V      +   TL+T QTGP G +V  +Y+EDG DI RE YL
Sbjct: 71  EPEAGEKGGVRLARSLAEVKQAAEAMFDRTLVTVQTGPAGRKVQRLYIEDGCDIAREFYL 130

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR++  ++F+ ST+GGMDIEEVA   P KI    IDP+ G+      +    L L 
Sbjct: 131 SLLVDRSTSRISFVVSTEGGMDIEEVAHKTPDKIVSFSIDPVTGIEPHHGRAAAVALGLG 190

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LYKAF  KDM++LE+NPL++ K GRL  LD+K+SFD NALY+H DI 
Sbjct: 191 GDQAAQITQITTSLYKAFVAKDMAMLEVNPLVLTKEGRLLCLDAKVSFDPNALYKHPDIV 250

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA + +L+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 251 ALRDENEEDPKEIEASKFDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGGNPANFLDVG 310

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D  VKGIL+NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 311 GGASKEKVIHAFKIITADPQVKGILVNIFGGIMKCDVIAEGIIGAVKEVGLKVPLVVRLE 370

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G  L+  SGL+VI A DLDDAAQKIV AV
Sbjct: 371 GTNVDLGKVLLERSGLDVIPADDLDDAAQKIVAAV 405


>gi|316931839|ref|YP_004106821.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           DX-1]
 gi|315599553|gb|ADU42088.1| succinyl-CoA synthetase, beta subunit [Rhodopseudomonas palustris
           DX-1]
          Length = 398

 Score =  474 bits (1221), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/397 (59%), Positives = 302/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ V V  G  I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVAVGHGFPIFKASEAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V    +++LG+TL+T QTG  G +VN +Y+E+G+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKDYAKQMLGATLVTVQTGADGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA + P+KI    +DP  G+      ++   L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHETPEKIVSFTVDPATGIMGHHGRTVAKALNLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY AF  KDM +LEINPL++ K G L+ LD+KISFD NALYRH+DIQ
Sbjct: 181 GDQAKQAEAMVAKLYAAFVAKDMDMLEINPLVLTKQGDLKCLDAKISFDGNALYRHIDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CDV+ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVAAVKG 397


>gi|163741828|ref|ZP_02149218.1| succinyl-CoA synthetase subunit beta [Phaeobacter gallaeciensis
           2.10]
 gi|161385001|gb|EDQ09380.1| succinyl-CoA synthetase subunit beta [Phaeobacter gallaeciensis
           2.10]
          Length = 397

 Score =  474 bits (1221), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQAFHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF DKDM +LEINPLI+  +G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GGQVKQCVKLMGQLYQAFVDKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNAVYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|254436507|ref|ZP_05050001.1| succinyl-CoA synthetase, beta subunit subfamily [Octadecabacter
           antarcticus 307]
 gi|198251953|gb|EDY76267.1| succinyl-CoA synthetase, beta subunit subfamily [Octadecabacter
           antarcticus 307]
          Length = 397

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/397 (59%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL  Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLASYGAPVSDGRAVLKAEDAKTAASELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S+     + +++LG TL+T QTGP G +VN VY+EDGADI  E YL
Sbjct: 61  EAGAGEAGGVRLTKSVGEAADEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGADIESEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRIGFVVSTEGGMDIEEVAANTPEKIINFTVDPATGYQAFHGRRVAFTLGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ      +L   LYKAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GQQVKQCVNLMGLLYKAFVEKDMEMLEINPLIVTNAGDLKVLDAKVSFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  +I  SGL+VI A DL D A+KIV AVKG
Sbjct: 361 GTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKAVKG 397


>gi|84500186|ref|ZP_00998452.1| succinyl-CoA synthase, beta subunit [Oceanicola batsensis HTCC2597]
 gi|84392120|gb|EAQ04388.1| succinyl-CoA synthase, beta subunit [Oceanicola batsensis HTCC2597]
          Length = 397

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAILRDYGCPVSDGRAVLKAENAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+DI RELYL
Sbjct: 61  EADAGEKGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+ + ST+GGMDIEEVA   P+KI    I+P  G        +   L ++
Sbjct: 121 ALLVDRQTSAVSIVCSTEGGMDIEEVAASTPEKILSFSIEPATGYQPFHGRRVAFALGME 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+M +G L+VLD+K+ FD NALYRH DI 
Sbjct: 181 GPQVKQMVQLLDKLYRAFTEKDMEMLEINPLIVMPDGNLKVLDAKVGFDGNALYRHNDII 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397


>gi|254511388|ref|ZP_05123455.1| succinyl-CoA synthetase, beta subunit [Rhodobacteraceae bacterium
           KLH11]
 gi|221535099|gb|EEE38087.1| succinyl-CoA synthetase, beta subunit [Rhodobacteraceae bacterium
           KLH11]
          Length = 397

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRAVLRAEEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E+ A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  E+YL
Sbjct: 61  EIDAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPEGKQVNRIYIEAGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L LQ
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQAYHGRRIAFALGLQ 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPL++   G L+VLD+KI FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYKAFIEKDMEMLEINPLVVSDRGDLKVLDAKIGFDGNAVYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKAVKG 397


>gi|86138986|ref|ZP_01057557.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. MED193]
 gi|85824217|gb|EAQ44421.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. MED193]
          Length = 397

 Score =  471 bits (1213), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEASEEAKKMLGRTLVTHQTGPVGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQAYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  +G ++VLD+K+SFD NA+YRH D+ 
Sbjct: 181 GAQIKQCVKLMGQLYQAFVEKDMEMLEINPLIVSDSGDIKVLDAKVSFDGNAIYRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|84515874|ref|ZP_01003235.1| succinyl-CoA synthetase subunit beta [Loktanella vestfoldensis
           SKA53]
 gi|84510316|gb|EAQ06772.1| succinyl-CoA synthetase subunit beta [Loktanella vestfoldensis
           SKA53]
          Length = 397

 Score =  471 bits (1213), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  ++    A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRPVTRAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EADAGDKGGVRLCRSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L 
Sbjct: 121 ALLVDRQTSRISFVVSTEGGMDIEEVAAATPEKILSFSVDPATGYQAFHGRRVAFTLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GNQIKQCVTLMGQLYKAFTEKDMEMLEINPLIVTDKGDLKVLDAKVSFDGNAMYRHGDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIIRNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|126734828|ref|ZP_01750574.1| succinyl-CoA synthetase, beta subunit [Roseobacter sp. CCS2]
 gi|126715383|gb|EBA12248.1| succinyl-CoA synthetase, beta subunit [Roseobacter sp. CCS2]
          Length = 397

 Score =  471 bits (1212), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/397 (57%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  ++    A++A   + GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRPVTRAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EADAGEAGGVRLAKSVEEAAQEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA++ P+KI    +DP  G  +     +   L L 
Sbjct: 121 ALLVDRATSRIGFVCSTEGGMDIEEVAENTPEKILNFTVDPATGYQAFHGRRVAFALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLYKAF +KDM +LEINPLI+   G L+VLD+K++FD NA+YRH D+ 
Sbjct: 181 GNQVKQCVALMGNLYKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVAFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G R+I ES ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEEGKRIINESDVDVIAADDLKDGAEKIVKAVKG 397


>gi|126740514|ref|ZP_01756201.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
 gi|126718315|gb|EBA15030.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
          Length = 397

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQSELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQPYHGRRVAFSLGLA 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF DKDM +LEINPLII  +G L+VLD+K+ FD NA+YRH D+ 
Sbjct: 181 GAQVKQCVKLMGQLYQAFVDKDMEMLEINPLIIADDGNLKVLDAKVGFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  S ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEAGKDIINNSDVDVIAADDLSDGAEKIVKAVKG 397


>gi|83950440|ref|ZP_00959173.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
 gi|83838339|gb|EAP77635.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
          Length = 397

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTGP G +VN +Y+EDG+ I +E YL
Sbjct: 61  EAGAGEAGGVRLAKSVEEAAEEAKRMLGRTLVTKQTGPAGKQVNRIYIEDGSGIEKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+AST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRVSFVASTEGGMDIEEVAESTPEKILSFSVDPATGYQPFHGRRIAFNLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F +KDM +LEINPLII   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GKQVKQCVSLMGTLYKMFLEKDMEMLEINPLIITDAGDLKCLDAKMGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  S ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKAVKG 397


>gi|149201198|ref|ZP_01878173.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149145531|gb|EDM33557.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 397

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 291/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGALDGPIWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EAGAGEAGGVRLARSVEDAAEEAKCMLGRTLVTKQTGPAGKQVNRIYIEDGSGIQTEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAEKTPEKILSFSVDPATGYQPFHGRRIAFNLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       +L   LYK F DKDM +LEINPLI+   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GGQVKQCVNLMGILYKLFLDKDMEMLEINPLIVSDKGDLKCLDAKMGFDSNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|85704793|ref|ZP_01035894.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
 gi|85670611|gb|EAQ25471.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
          Length = 397

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/397 (58%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAASALDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTG  G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EAGAGEAGGVRLARSVEEAAEEAKRMLGRTLVTKQTGAAGKQVNRIYIEDGSGIQTEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAEKTPEKILSFSVDPATGYQPFHGRRIAFNLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYK F +KDM +LEINPLI+   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GGQIKQCVALMGTLYKLFVEKDMEMLEINPLIVSDKGDLKCLDAKMGFDSNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|254452580|ref|ZP_05066017.1| succinyl-CoA synthase, beta subunit [Octadecabacter antarcticus
           238]
 gi|198266986|gb|EDY91256.1| succinyl-CoA synthase, beta subunit [Octadecabacter antarcticus
           238]
          Length = 397

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 288/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL  Y  PV+ G  +     A++A   L GP++VVK+QIHAGGRGKG F+
Sbjct: 1   MNIHEYQAKALLASYGAPVSDGRAVLKAEDAKTAASELDGPIWVVKAQIHAGGRGKGHFQ 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S+     + +++LG TL+T QTGP G +VN VY+EDGA I  E YL
Sbjct: 61  EAGAGEAGGVRLTKSVGEAADEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGAAIESEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L 
Sbjct: 121 ALLVDRQTSRIGFVVSTEGGMDIEEVAANTPEKIVNFTVDPATGYQAFHGRRVAFTLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ      +L   LYKAF +KDM +LEINPLI+ K G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GQQVKQCINLMGLLYKAFTEKDMEMLEINPLIVTKAGDLKVLDAKVSFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  +I  SGL+VI A DL D A+KIV AVKG
Sbjct: 361 GTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKAVKG 397


>gi|260576571|ref|ZP_05844559.1| succinyl-CoA synthetase, beta subunit [Rhodobacter sp. SW2]
 gi|259021175|gb|EEW24483.1| succinyl-CoA synthetase, beta subunit [Rhodobacter sp. SW2]
          Length = 397

 Score =  468 bits (1204), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR +  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKALLRGFGAPVSDGRVVLRAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGSFL 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+       R++LG TL+T+QTGP G  VN +Y+EDG+DI RELYL
Sbjct: 61  EPEAGEKGGVRLARSVSEAAEFARQMLGRTLVTEQTGPAGKVVNRIYIEDGSDIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR++  ++F+AST+GGM IE+VA   P+KI    +DP  G++      +   L L 
Sbjct: 121 ALLIDRSTSRISFVASTEGGMSIEDVAHATPEKILTFSVDPASGLSDFHGRRIAFSLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +      L   LYKAF +KDM +LEINPLI+   G L+ LDSK+SFD NALYRH D+ 
Sbjct: 181 GNSVKQCVALVKTLYKAFVEKDMDMLEINPLIVTPAGDLKCLDSKMSFDGNALYRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  +I  SGL+VI   +L DAAQKIV AVKG
Sbjct: 361 GTNVELGKEIIRNSGLDVIAGDNLSDAAQKIVKAVKG 397


>gi|89053312|ref|YP_508763.1| succinyl-CoA synthetase subunit beta [Jannaschia sp. CCS1]
 gi|122499441|sp|Q28U74|SUCC_JANSC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|88862861|gb|ABD53738.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Jannaschia sp.
           CCS1]
          Length = 397

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/397 (57%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL +Y  PV+ G V++    A++A   + GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLAQYGAPVSDGRVVTKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S +    + +++LG TL+T QTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EADAGEAGGVRLAKSAQEAADEAKKMLGRTLVTHQTGPVGKQVNRIYIEDGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR S  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQSSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPYHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       L   L+ AF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH D+ 
Sbjct: 181 GQQVKQCVKLMGQLFTAFQEKDMEMLEINPLIVTDEGNLKVLDAKVSFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGI +NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGIFVNIFGGIMRCDIIAEGVIAAVKEVGLQMPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|159045418|ref|YP_001534212.1| succinyl-CoA synthetase subunit beta [Dinoroseobacter shibae DFL
           12]
 gi|157913178|gb|ABV94611.1| succinyl-CoA synthetase beta chain [Dinoroseobacter shibae DFL 12]
          Length = 397

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/397 (57%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G  VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGEKGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKTVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP+ G        +   L L 
Sbjct: 121 ALLVDRGTSRISFVCSTEGGMDIEEVAASTPEKILSFAVDPVTGYQPYHGRRIAFALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F +KDM +LEINPLI+  +G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYQCFVEKDMEMLEINPLIVTDSGDLKCLDAKMGFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINSSGLNVIAAENLRDGAEKIVAAVKG 397


>gi|255263427|ref|ZP_05342769.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
 gi|255105762|gb|EET48436.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
          Length = 397

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/397 (58%), Positives = 290/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRPVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S+     + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGDAGGVRLAKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSQISFVCSTEGGMDIEEVAAETPEKILSFSVDPAAGYQAYHGRRIAFSLGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GAQVKQCVALMGTLYKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAVYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  S ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKAVKG 397


>gi|294011145|ref|YP_003544605.1| succinyl-CoA synthetase beta chain [Sphingobium japonicum UT26S]
 gi|292674475|dbj|BAI95993.1| succinyl-CoA synthetase beta chain [Sphingobium japonicum UT26S]
          Length = 399

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/396 (58%), Positives = 289/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY  P+A G    SV  A  A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGAPIAAGYAAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  +L  V +   ++LG+TL+T QTG  G +VN +YV DGADI +E YL
Sbjct: 61  ELGPDAKGGVRLAFNLDEVKAHAADMLGNTLVTIQTGEAGKQVNRLYVTDGADIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +G VAF+ ST+GGMDIEEVA   P+KI    +DP  G       ++   LEL 
Sbjct: 121 ALLVDRATGRVAFVVSTEGGMDIEEVAHSTPEKIHTFAVDPATGFMPHHGRAVAAALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY+AF   D S +EINPL + + G L VLD+K+ FD NAL+RH DI 
Sbjct: 181 GDQAKQAAKVASSLYEAFLATDASQIEINPLAVTQQGNLLVLDAKVGFDGNALFRHKDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED+ E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDLTEEDAAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII  D +VKGIL+NIFGGIM+CD++  GI++A K+V +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIADGIVAAAKDVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+
Sbjct: 361 GTNVQQGKDILAASGLAIVPADDLGDAARKIVAEVR 396


>gi|288960089|ref|YP_003450429.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
 gi|288912397|dbj|BAI73885.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
          Length = 399

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/396 (57%), Positives = 295/396 (74%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y V V +G V  +   A S  + L GP++VVKSQIHAGGRG GRF+
Sbjct: 1   MNIHEYQAKNLLRGYGVAVPRGGVAFTPEEAASVARELGGPVWVVKSQIHAGGRGAGRFQ 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   KGGVRV  S++ V S+  E+L   L+TKQTGP G  V  +YVE+GADI RELYL
Sbjct: 61  DNPG-GKGGVRVVKSVEEVSSNAAEMLNHVLVTKQTGPAGKEVKRLYVEEGADIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            LL DR +G V  IAST+GGM+IEEVA + P+KI K+ IDP  G+       +   L L+
Sbjct: 120 GLLTDRATGRVTIIASTEGGMEIEEVAHNTPEKIVKVAIDPATGIQGHHTRKVAFALGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+            YKAF + D +++EINPLI+  +G +  LD+K+SFDDNAL+RH D+ 
Sbjct: 180 GKQVASAAKFIQAAYKAFTELDCAIVEINPLIVTGSGDILALDAKMSFDDNALFRHKDVA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 ALRDEAEEDPAEIEAAKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFK+I SDS+V+GIL+NIFGGIMRCDV+ +G+++A ++VK+++PLV+RLE
Sbjct: 300 GGATKERVTAAFKLILSDSAVEGILVNIFGGIMRCDVIAEGVVAAARDVKLHVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV +G R++A+SGL +++A +LDDAA+KIV AVK
Sbjct: 360 GTNVALGKRILADSGLPILSADNLDDAAKKIVAAVK 395


>gi|288959417|ref|YP_003449758.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
 gi|288911725|dbj|BAI73214.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
          Length = 398

 Score =  464 bits (1195), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 225/396 (56%), Positives = 301/396 (76%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK+LL+KY V V +G V  +   AE+  + L GP++VVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQAKSLLKKYGVAVPRGGVAYTPQEAETVARELGGPVWVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P + KGGVRV  S++ V  +  E+L   L+TKQTG  G  V  +YVE+GADI RELYL
Sbjct: 61  DNP-EGKGGVRVVKSIEDVGKNAAEMLNHVLVTKQTGAEGREVKRLYVEEGADIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR +G V  +AST+GGM+IEEVA + P+KI K+ +DP  G+       +   L L+
Sbjct: 120 GMLIDRATGRVTIMASTEGGMEIEEVAHNTPEKIIKVAVDPATGIQGYHTRKVAFALGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+            Y+AF D D +++EINPLI+  +G +  LD+K++FDDNAL+RH D++
Sbjct: 180 GKQVGAAAKFIQAAYQAFIDLDCAIVEINPLIVTGSGDILALDAKMNFDDNALFRHKDVE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED  EIEA +H+L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 ELRDEAEEDPAEIEAAKHSLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFK+I SDS+V+GIL+NIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVTAAFKLILSDSNVEGILVNIFGGIMRCDVIAEGVVAAAREVHLHVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGL +++A +L DAA+K+V AVK
Sbjct: 360 GTNVDLGKKILAESGLPILSADNLADAAEKVVKAVK 395


>gi|167644201|ref|YP_001681864.1| succinyl-CoA synthetase subunit beta [Caulobacter sp. K31]
 gi|189046906|sp|B0T3D1|SUCC_CAUSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167346631|gb|ABZ69366.1| succinyl-CoA synthetase, beta subunit [Caulobacter sp. K31]
          Length = 399

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/397 (60%), Positives = 303/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++  PV +G    +V  A +A + L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKAVLAEFGAPVPRGYPAFTVEEAVAAAEKLGGPVFVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S++ V ++  E+LG  L+T QTGP G +VN +YVE+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVEDVKTNAAEMLGRVLVTHQTGPKGKQVNRLYVEEGAAIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR + MV+ +AST+GGMDIE+VA   P+KI    IDP  GV      +L   L L 
Sbjct: 121 SLLVDRETSMVSVVASTEGGMDIEDVAHATPEKIHSFSIDPATGVWPTHARALAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDM++LEINPLI+ ++  L+VLD+K+SFD NALYRH DI+
Sbjct: 181 GGLAKEAATLLGQLYTAFLAKDMAMLEINPLIVTEDDHLKVLDAKLSFDGNALYRHPDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKKIIRESGLNVIAANDLSDGAEKIVKAVKG 397


>gi|254463090|ref|ZP_05076506.1| succinyl-CoA synthase, beta subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206679679|gb|EDZ44166.1| succinyl-CoA synthase, beta subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 398

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/398 (58%), Positives = 292/398 (73%), Gaps = 1/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PV+ G  +     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVSDGRAVLKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S      + +++LG TL+T QTGP G +VN +Y+EDG+DI  ELYL
Sbjct: 61  EADAGEKGGVRLAFSASEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIEAELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKIISFSVDPATGYQAFHGRRIAFELGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHLDI 239
           G        L   LY+AF +KDM  LEINPLI+++ +G L+VLD+K+ FD NALYRH DI
Sbjct: 181 GAQVKQCVKLMGQLYQAFVEKDMEQLEINPLIVLEGSGDLKVLDAKVGFDGNALYRHADI 240

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDV
Sbjct: 241 MALRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDV 300

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RL
Sbjct: 301 GGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRL 360

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV+ G  +I  S ++VI A DL D AQKIV AVKG
Sbjct: 361 EGTNVEEGKAIINNSDVDVIAADDLKDGAQKIVKAVKG 398


>gi|87201182|ref|YP_498439.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           aromaticivorans DSM 12444]
 gi|123488024|sp|Q2G3G8|SUCC_NOVAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|87136863|gb|ABD27605.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 399

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/398 (58%), Positives = 295/398 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY V +  G+   +V  A +A K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNVHEYQAKELLAKYGVGIPAGIAALTVEEAVAAAKQLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V +  +E+LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQVNRLYVTDGVDIDKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR +G VA I ST+GGMDIEEVA   P+KI  ++IDP  G       ++   L+L 
Sbjct: 121 SMVVDRATGRVAIIVSTEGGMDIEEVAHSTPEKIATIVIDPAEGFMPHHGRAVGFALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY AF   D S+LEINPL+  K+G L VLD+K+SFD NALYRH D+ 
Sbjct: 181 GDLLKQAAKIAEQLYTAFVALDCSMLEINPLVQTKDGNLLVLDTKMSFDSNALYRHPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ALRDETEEDPAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKII  D +VKGIL+NIFGGIM+CD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+ V
Sbjct: 361 GTNVQQGKDILANSGLPIVPANDLGDAAKKIVAEVRAV 398


>gi|307294197|ref|ZP_07574041.1| succinyl-CoA synthetase, beta subunit [Sphingobium chlorophenolicum
           L-1]
 gi|306880348|gb|EFN11565.1| succinyl-CoA synthetase, beta subunit [Sphingobium chlorophenolicum
           L-1]
          Length = 399

 Score =  461 bits (1187), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/396 (57%), Positives = 287/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY  P+A G    SV  A  A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGAPIAAGYAAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  +L  V +   ++LG+TL+T QTG  G +VN +Y+ DGADI +E YL
Sbjct: 61  ELGPDAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQVNRLYITDGADIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR S  VAF+ ST+GGMDIEEVA   P+KI    +DP  G       ++   L L 
Sbjct: 121 ALLVDRASSRVAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPASGFQPHHGRAVAAALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY AF D D   +E+NPL + + G L VLD+K+ FD NA++RH DI 
Sbjct: 181 GDQAKQAAKVASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKII  D +VKGIL+NIFGGIM+CD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+
Sbjct: 361 GTNVQQGKDILAASGLAIVPADDLGDAARKIVAEVR 396


>gi|83592547|ref|YP_426299.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|123526923|sp|Q2RV33|SUCC_RHORT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83575461|gb|ABC22012.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodospirillum
           rubrum ATCC 11170]
          Length = 399

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/396 (58%), Positives = 291/396 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L KY VPV KG V  +   AE     L GP+YVVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKQVLAKYGVPVLKGGVAYTAEEAEKVALDLAGPVYVVKSQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVRV  S   V S+ +++LG+TL+T Q+G  G  V  VY+EDG DI RELYL
Sbjct: 61  EPSAGDKGGVRVVKSTDEVFSNAKQMLGATLVTHQSGAEGKEVKRVYIEDGCDIKRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   ID   G++     ++   L L+
Sbjct: 121 SLLVDRATSAVTVMASTEGGMDIEEVANHSPEKIFFQAIDQATGISGFHCRNVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F + D S+LEINPL++  +G++  LD K++FD NALYRH DI 
Sbjct: 181 GKQVGAFTKLLSALYKCFTETDCSMLEINPLVVTGDGQVIPLDCKMNFDSNALYRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD  EED  E+EA +H+L+YI LDG+IGCMVNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 241 EYRDEDEEDPMELEASKHDLNYIKLDGSIGCMVNGAGLAMATMDIIKLKGGAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII SD +V GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 301 GGATRERVTAAFKIILSDPNVDGILVNIFGGIMRCDVIAEGVIAAAREVSLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGL +I+A +L DAA+K+V AVK
Sbjct: 361 GTNVELGKKIMVESGLPIISADNLADAAEKVVKAVK 396


>gi|85709717|ref|ZP_01040782.1| succinyl-CoA synthetase subunit beta [Erythrobacter sp. NAP1]
 gi|85688427|gb|EAQ28431.1| succinyl-CoA synthetase subunit beta [Erythrobacter sp. NAP1]
          Length = 399

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/396 (57%), Positives = 290/396 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+++ + V  G    SV  A +A K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNVHEYQAKELLKEHGIAVPDGHAALSVEEAVAAAKKLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELP D+KGGVR+  S++ V ++ +E+LG+TL+T QTG  G +VN +YV DG DI +E Y 
Sbjct: 61  ELPEDAKGGVRLAKSIEEVEANAKEMLGNTLVTVQTGAEGKQVNRLYVTDGVDIAKEYYF 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG VA + ST+GGMDIE VA D P+KI  + IDP  G       ++   L+L 
Sbjct: 121 SLLVDRASGQVAMVVSTEGGMDIEAVAHDTPEKITTITIDPAQGFMPHHGRAVAFGLKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF   D  +LEINPL+  ++G+L VLD+K+SFD NAL+RH DI+
Sbjct: 181 GDLNKQAQKLAKKLYDAFMATDSEMLEINPLVETEDGQLLVLDAKMSFDGNALFRHPDIE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 AMRDETEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +V+GIL+NIFGGIMRCD + +GI+ A KEV +++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVIAAKEVDLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVEKGKEILANSGLPIVPADDLGDAAKKIVAEVK 396


>gi|300024733|ref|YP_003757344.1| succinyl-CoA synthetase subunit beta [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526554|gb|ADJ25023.1| succinyl-CoA synthetase, beta subunit [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 399

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/398 (57%), Positives = 287/398 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L R Y VP   G    SV  A  A K LPGP++VVK+QIHAGGRGKG+F 
Sbjct: 1   MNIHEYQAKELYRAYGVPTPNGFAAFSVAEAVEAAKKLPGPVWVVKAQIHAGGRGKGKFL 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V     ++LG TL+T QTG  G  VN +Y+EDG+ I RELYL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKEFAEQMLGKTLVTVQTGNAGRVVNRLYIEDGSAIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR++  VAFI S  GGM+IE+VA + P+KI  L IDP  G        +   L L+
Sbjct: 121 SALVDRSTSRVAFIVSQAGGMNIEDVAHETPEKIHTLTIDPATGYQPFHGRKVAFALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G L  NLY+   +KDMSLLEINPL++ K+G+L  LD K++FD NALYRH +I 
Sbjct: 181 GDQVKAAGKLVENLYRMVVEKDMSLLEINPLVVTKDGKLICLDGKMNFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED  EIEA +H+L+++ LDGNIGC+VNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLGEEDQTEIEASKHDLAFVKLDGNIGCLVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII +D SVKGIL+NIFGGIMRCD++ +G+++A +E+ I +PLV+RLE
Sbjct: 301 GGASKEKVREAFKIILADPSVKGILVNIFGGIMRCDIIAEGVIAAAREMDIKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD+G +++ ESGL +I A DL DAA+KI   +K V
Sbjct: 361 GTNVDLGKKILKESGLKIIPADDLADAAKKITDELKQV 398


>gi|154251905|ref|YP_001412729.1| succinyl-CoA synthetase subunit beta [Parvibaculum lavamentivorans
           DS-1]
 gi|189081764|sp|A7HT39|SUCC_PARL1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|154155855|gb|ABS63072.1| succinyl-CoA synthetase, beta subunit [Parvibaculum lavamentivorans
           DS-1]
          Length = 389

 Score =  458 bits (1178), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/396 (58%), Positives = 290/396 (73%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L KY VPV  G    +   A +  K L GP++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKAVLAKYGVPVPSGHAAFTPEEAVAKAKELGGPVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V  +   ++GSTL+T QTGP G  VN +Y+EDG+ I RELYL
Sbjct: 58  -------GGVKVVKSLDDVKKEATRLIGSTLVTHQTGPDGKEVNRLYIEDGSSISRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V+FI ST+GGMDIEEVAK  P+KI    +DP  G++      +   L L+
Sbjct: 111 SILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFSVDPASGISGFHGRKVAYALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L   LYKAF  +DMS+LEINPL++   G L  LD+K++FD NALYRH DI 
Sbjct: 171 GDQVKQGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLLCLDAKVNFDSNALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+EA +++L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLTEEDPAEVEASKYDLNYIKLDGKIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD SV+GIL+NIFGGIMRCD++ +G+++A KEV +++PLV+RLE
Sbjct: 291 GGATKEKVTAAFKIILSDPSVEGILVNIFGGIMRCDIIAEGVIAAAKEVSLSVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGL +I+A +L DAA+KIV AVK
Sbjct: 351 GTNVDLGKKIMAESGLPIISADNLADAAEKIVKAVK 386


>gi|326386303|ref|ZP_08207927.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209528|gb|EGD60321.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 399

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/398 (57%), Positives = 294/398 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL K+ V +  G+   +V  A  A K LPGP+YVVK+QIHAGGRGKG+FK
Sbjct: 1   MNVHEYQAKELLAKFGVNIPAGIPALTVEEAVEAAKQLPGPVYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  ++  V +  RE+LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELPADAKGGVRLAKTIGEVETHAREMLGNTLVTVQTGEAGKQVNRLYVTDGVDIAKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR +G VA I ST+GGMDIEEVA   P+KI  ++IDP  G       ++   L+L 
Sbjct: 121 SLVVDRGTGRVALIVSTEGGMDIEEVAHSTPEKITTIVIDPAQGFMPHHGRAVAFALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  +LY+AF   D ++LEINPL+  ++G+L VLD+K+SFD NALYRH +  
Sbjct: 181 GFLNKQAQQLAKSLYEAFVSLDCAMLEINPLVETRDGQLLVLDAKLSFDSNALYRHPEEV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 VLRDETEEDPAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII  D +VKGIL+NIFGGIM+CD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G  ++  SGL ++ A DL DAA+KIV  V+ V
Sbjct: 361 GTNVEKGKEILTHSGLPIVPANDLGDAAKKIVAEVQKV 398


>gi|315497282|ref|YP_004086086.1| succinyl-CoA synthetase, beta subunit [Asticcacaulis excentricus CB
           48]
 gi|315415294|gb|ADU11935.1| succinyl-CoA synthetase, beta subunit [Asticcacaulis excentricus CB
           48]
          Length = 425

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/400 (60%), Positives = 296/400 (74%), Gaps = 3/400 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           MNIHE+QAKA+L+++ V V +G    S   A  A K L      ++VVKSQIHAGGRGKG
Sbjct: 26  MNIHEHQAKAVLKEFGVAVPRGYPAFSPKEALEAAKNLKDDSTKVWVVKSQIHAGGRGKG 85

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           RF+ L  D+KGGVRV  S   V ++  E+LG  L+T QTGP G +VN +Y+E+GADI +E
Sbjct: 86  RFEGLGPDAKGGVRVVKSPADVEANADEMLGRVLVTHQTGPAGKQVNRLYIEEGADIKKE 145

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYLSLLVDR S  ++ +AST+GGMDIEEVA   P+KI    IDP  GV      +L   L
Sbjct: 146 LYLSLLVDRVSSRISVVASTEGGMDIEEVAHSTPEKIHSFTIDPATGVFPVHGRTLAHAL 205

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+G     G  L   LY AF  KDM +LEINPLII  + +L VLD+K+SFD N+L+RH 
Sbjct: 206 GLKGDLAKQGFKLLQQLYAAFNAKDMDMLEINPLIITGDDQLLVLDAKVSFDSNSLFRHP 265

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DIQ LRD+SEED++EIEA + +LSYIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFL
Sbjct: 266 DIQALRDLSEEDAKEIEASKFDLSYIALDGEIGCMVNGAGLAMATLDIIKLYGSEPANFL 325

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  +KV AAFKIITSD  VKGIL+NIFGGIM+CD++  G+++AVKEV + +PLV+
Sbjct: 326 DVGGGATTEKVTAAFKIITSDPKVKGILVNIFGGIMKCDIIATGVIAAVKEVGLKVPLVV 385

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NV++G ++I ESGLNVI A DL DAA KIV AVKG
Sbjct: 386 RLEGTNVELGKKIINESGLNVIAADDLADAAAKIVKAVKG 425


>gi|94498754|ref|ZP_01305303.1| succinyl-CoA synthetase, beta subunit [Sphingomonas sp. SKA58]
 gi|94421804|gb|EAT06856.1| succinyl-CoA synthetase, beta subunit [Sphingomonas sp. SKA58]
          Length = 399

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/396 (56%), Positives = 285/396 (71%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY  P+A G    SV  A  A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGAPIAAGYPAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  +L  V +   ++LG+TL+T QTG  G +VN +Y+ DGADI +E YL
Sbjct: 61  ELAPEAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQVNRLYITDGADIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  +AF+ ST+GGMDIEEVA   P+KI    +DP  G       ++   L L 
Sbjct: 121 ALLVDRATSRIAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPASGFQPHHGRAVAAALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY AF D D   +E+NPL + + G L VLD+K+ FD NA++RH DI 
Sbjct: 181 GDQAKQAAKVASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED+ E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDLTEEDAAEVEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +VKGIL+NIFGGIM+CD++  GI++A KEV +++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIANGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+
Sbjct: 361 GTNVQEGKDILANSGLPIVPADDLGDAAKKIVAEVR 396


>gi|149185337|ref|ZP_01863654.1| succinyl-CoA synthetase, beta subunit [Erythrobacter sp. SD-21]
 gi|148831448|gb|EDL49882.1| succinyl-CoA synthetase, beta subunit [Erythrobacter sp. SD-21]
          Length = 399

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/396 (58%), Positives = 288/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY + V  G    +V  A    K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGIAVPAGHAAMTVEEAVEGAKKLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D++GGVR+  S+  V ++ +E+LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELGPDARGGVRLSKSIDDVEANAKEMLGNTLVTIQTGDEGKQVNRLYVTDGVDIEKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VA IAST+GGMDIE+VA + P+KI  + IDP  G       ++   L+L 
Sbjct: 121 SMLVDRATGRVAMIASTEGGMDIEDVAHETPEKITTITIDPAQGFMPHHGRAVAFALKLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF D DM +LEINPL+  K G L VLD+K+SFD N+LYRH D++
Sbjct: 181 GDTNKQCQKLAKQLYTAFMDLDMEMLEINPLVEDKEGNLLVLDTKMSFDGNSLYRHKDVE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 AMRDETEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +V+GIL+NIFGGIMRCD + +GI+ A KEV +++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVVAAKEVDLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVEKGKDILANSGLPIVPADDLGDAARKIVAEVK 396


>gi|83313057|ref|YP_423321.1| succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123540678|sp|Q2W063|SUCC_MAGMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|82947898|dbj|BAE52762.1| Succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 398

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/396 (57%), Positives = 293/396 (73%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L KY V V KG V  +   A    K L GP++VVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDLGGPVWVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P + KGGVRV  S++ V +++ ++LG  LITKQTGP G  V  VY+E G DI RELYL
Sbjct: 61  NDP-NGKGGVRVAKSVEEVKTNVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V  +AST+GGM+IEEVA ++P+KI K+ IDP+ G        +   L L+
Sbjct: 120 SMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGLGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LYKAF D D S++EINPL++   G L  LD+K++FDDNAL+RH DI+
Sbjct: 180 GKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED  E+EA +H+L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 ELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +I A +L DAA+K+V AVK
Sbjct: 360 GTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395


>gi|23014368|ref|ZP_00054188.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 398

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/396 (57%), Positives = 292/396 (73%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L KY V V KG V  +   A    K L GP+YVVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDLGGPIYVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P + KGGVRV  S+  V +++ ++LG  LITKQTGP G  V  VY+E G DI RELYL
Sbjct: 61  NDP-NGKGGVRVVKSIDEVRANVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V  +AST+GGM+IEEVA ++P+KI K+ IDP+ G        +   L L+
Sbjct: 120 SMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRKIAFSLGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LYKAF D D S++EINPL++   G L  LD+K++FDDNAL+RH DI+
Sbjct: 180 GKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED  E+EA +H+L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 ELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +I A +L DAA+K+V AVK
Sbjct: 360 GTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395


>gi|296282965|ref|ZP_06860963.1| succinyl-CoA synthetase subunit beta [Citromicrobium bathyomarinum
           JL354]
          Length = 399

 Score =  455 bits (1170), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/395 (56%), Positives = 292/395 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL ++ + + KG+   +V  A +  K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAEHGIAIPKGIPAMNVEEAVAGAKQLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V    RE+LG+TL+T QTG  G  VN +YV DG DI +E YL
Sbjct: 61  ELGPDAKGGVRLAKSIEEVEEAAREMLGNTLVTVQTGDAGKEVNRLYVTDGVDIAKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR SG VA +AST+GGMDIE VA + P++I  + IDP  G       ++   L+L+
Sbjct: 121 ALLVDRASGEVAIVASTEGGMDIETVAHETPERITTITIDPAQGFMPHHGRAVAFALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF   D ++LEINPL+  ++G L VLD+K+SFD NA+YR  +++
Sbjct: 181 GDLNKQAQKLSKQLYEAFLAYDCAMLEINPLVETEDGNLLVLDTKMSFDSNAMYRQKEVE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRDV+EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 KLRDVTEEDEAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFK+I  D +V+GIL+NIFGGIM+CDV+  GI++A KEV I +PLV+RLE
Sbjct: 301 GGANKEKVTAAFKLILKDPAVEGILVNIFGGIMKCDVIADGIVAAAKEVNIQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  ++A SGL ++ A DL DAA+KIV  V
Sbjct: 361 GTNVEKGKEILANSGLAIVPADDLGDAAKKIVAEV 395


>gi|148556100|ref|YP_001263682.1| succinyl-CoA synthetase subunit beta [Sphingomonas wittichii RW1]
 gi|189030215|sp|A5VB78|SUCC_SPHWW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148501290|gb|ABQ69544.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sphingomonas
           wittichii RW1]
          Length = 399

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/396 (59%), Positives = 294/396 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL K+ V V  G    +V  A  A K LPGP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKFGVAVPAGHAALTVDEAVEAAKKLPGPIWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S+  V ++  ++LG+TL+T QTG  G +VN +YV DGADI  E YL
Sbjct: 61  ELPADAKGGVRLSKSIDEVKANAADMLGNTLVTIQTGEAGKQVNRLYVTDGADIKSEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G +A I ST+GGMDIE+VA D P+KI  ++IDP  G       ++   L+L+
Sbjct: 121 SMLVDRKTGRIAMIVSTEGGMDIEQVAHDTPEKIRTIVIDPAEGFQPHHGRAVAFALKLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF   DMS+LE+NPL+   +G+L VLD+K+SFD NALYRH DI 
Sbjct: 181 GDLNKQAVKLAEQLYNAFIATDMSMLEVNPLVETTDGKLLVLDAKVSFDSNALYRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA Q++L+YI LDG+IGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ALRDETEEDPAEIEASQYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD +VKGIL+NIFGGIMRCD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIIAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  L+A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVQQGKDLLAGSGLPIVAADDLGDAARKIVAEVK 396


>gi|103485672|ref|YP_615233.1| succinyl-CoA synthetase, beta subunit [Sphingopyxis alaskensis
           RB2256]
 gi|98975749|gb|ABF51900.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sphingopyxis
           alaskensis RB2256]
          Length = 426

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/398 (58%), Positives = 289/398 (72%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL K+ V V +G+   SV  A +A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 25  MNIHEYQAKELLAKFGVAVPRGIAAMSVEEAVAAAKQLPGPLYVVKSQIHAGGRGKGKFK 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V S  RE+LG+TL+T QTG  G +VN +Y+ DGADI +E YL
Sbjct: 85  ELGPDAKGGVRLARSIEEVGSHAREMLGNTLVTIQTGEAGKQVNRLYITDGADIKKEYYL 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR S  +A +AST+GGMDIE VA + P KI  + IDP  G+      S+   LEL 
Sbjct: 145 ALLVDRASSRIAVVASTEGGMDIETVAHNTPDKIHTITIDPATGLMPHHGRSVAAALELT 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NG-RLRVLDSKISFDDNALYRHL 237
           G        +   LY AF   D   +EINPL + +  NG  L VLD+K+ FD NA++RH 
Sbjct: 205 GDLAKQAAKVLAGLYDAFLATDAEQIEINPLAVCEGANGDELLVLDAKLGFDGNAMFRHP 264

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DI ELRD++EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFL
Sbjct: 265 DIAELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFL 324

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA ++KV AAFKII  D +V+GIL+NIFGGIM+CD++  GI++A KEV +++PLV+
Sbjct: 325 DVGGGASKEKVTAAFKIILKDPAVEGILVNIFGGIMKCDIIADGIVAAAKEVNLSVPLVV 384

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV  G  ++A SGL ++ A DL DAA+KIV  V
Sbjct: 385 RLEGTNVQQGKDILANSGLPIVAANDLGDAAKKIVAEV 422


>gi|310814643|ref|YP_003962607.1| succinyl-CoA synthetase subunit beta [Ketogulonicigenium vulgare
           Y25]
 gi|308753378|gb|ADO41307.1| succinyl-CoA synthetase subunit beta [Ketogulonicigenium vulgare
           Y25]
          Length = 405

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/396 (57%), Positives = 288/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y +PV  G +I +   A+ A   L GPL+VVK+QIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKGLLRDYQIPVGAGQIILNSRDADQAAAALQGPLWVVKAQIHAGGRGKGHFI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A + GGVR+  S        R++L +TL+T QTGP G +V  VY+E GADI RELYL
Sbjct: 61  EEAAGAGGGVRLARSASEAAQIARQMLDNTLVTVQTGPKGRKVGRVYLEAGADIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +  ++F+ ST+GG+DIE VA   P+K+  + +DP  G       ++   LEL 
Sbjct: 121 ALLIDRKTSRISFVCSTEGGVDIEHVAATTPEKVITIAVDPATGFQQWHGRAIAFALELS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L  NLY+AF ++DM +LEINPLI+   G L  LD+K+ FD+NALYRH +I 
Sbjct: 181 GAQIKECVALTGNLYRAFTERDMEMLEINPLIVTPAGHLHCLDAKVGFDNNALYRHPEIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YI LDG+IGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDEAEEDEKELAASKFDLNYITLDGSIGCMVNGAGLAMATMDIIKLYGSAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +V+GIL+NIFGGIMRCD++  GI++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTEAFKIITSDPNVQGILVNIFGGIMRCDIIADGIIAAVREVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+IG  +I  SGLNVI A DL DAAQKIV AVK
Sbjct: 361 GTNVEIGKDIIRNSGLNVIPADDLADAAQKIVAAVK 396


>gi|85375531|ref|YP_459593.1| succinyl-CoA synthetase subunit beta [Erythrobacter litoralis
           HTCC2594]
 gi|122543284|sp|Q2N695|SUCC_ERYLH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|84788614|gb|ABC64796.1| succinyl-CoA synthetase, beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 399

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/396 (57%), Positives = 287/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY + +  G    +V  A +  K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNLHEYQAKELLAKYGIGIPAGHAALTVEEAVAGAKQLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V +  RE+LG+TL+T QTG  G +VN +YV DG DI  E YL
Sbjct: 61  ELGPDAKGGVRLAKSIEDVEASAREMLGNTLVTVQTGEEGKQVNRLYVTDGVDIASEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR SG V  I ST+GGMDIEEVA   P+KI  + IDP  G       ++   L+L 
Sbjct: 121 SMVVDRASGRVGMIVSTEGGMDIEEVAHSTPEKITTITIDPAQGFMPHHGRAVAFALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF D D  +LEINPL+  ++G+L VLD+K+S D NALYRH D++
Sbjct: 181 GDLNKQAQKLAKQLYTAFMDLDCEMLEINPLVETEDGQLLVLDTKMSIDGNALYRHKDVE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD +EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 EMRDETEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +V+GIL+NIFGGIMRCD + +GI+ A KEV++++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVVAAKEVELDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVEKGKDILANSGLPIVPADDLGDAARKIVAEVK 396


>gi|332186916|ref|ZP_08388657.1| succinate-CoA ligase, beta subunit [Sphingomonas sp. S17]
 gi|332012926|gb|EGI54990.1| succinate-CoA ligase, beta subunit [Sphingomonas sp. S17]
          Length = 399

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 224/398 (56%), Positives = 289/398 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL K+ VPV  G    +V  A  A   LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKFGVPVPAGFAAMTVEEAVEASSKLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  + + V +   ++LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELGPDAKGGVRLAKTAEEVRAHATDMLGNTLVTIQTGEAGKQVNRLYVTDGVDIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLV+R +G V+ +AST+GGMDIE VA D P+KI  + ID   G       ++   LEL 
Sbjct: 121 ALLVNRATGRVSMVASTEGGMDIETVAHDTPEKIHSIDIDTATGFMPHHGRAVAAALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++   LY AF   D   +EINPL + ++G+L VLD+K+ FD NA++RH D+ 
Sbjct: 181 GDLAKQAANVASKLYAAFLGTDAEQIEINPLAVTEDGKLMVLDAKVGFDGNAMFRHKDLM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED+ E+EA +++L+YI LDG+IGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDTTEEDAMELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKII SD +VKGIL+NIFGGIMRCD++  GI++A KEV + +PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIADGIVAAAKEVNLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G  ++A SGL ++ A DL DAA+KIV  V+ V
Sbjct: 361 GTNVEKGKEILANSGLAIVPANDLGDAAKKIVAEVQKV 398


>gi|114769289|ref|ZP_01446915.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
 gi|114550206|gb|EAU53087.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
          Length = 397

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/397 (58%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y  PV+ G  +     A SA   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKQLLKSYGCPVSVGRPVYKASEARSAANELGGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+    S+  ++LG+TL+T QTGP G +VN +Y+EDG+DI  ELYL
Sbjct: 61  EPAAGEKGGVRLTFSIDEAASEAEKMLGNTLVTHQTGPAGKQVNRIYIEDGSDIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT+  ++F+AST+GGMDIE VA+  P+KI  + IDP  G T E+   + + L+L 
Sbjct: 121 AVLLDRTTSRISFVASTEGGMDIEAVAEKTPEKIITVTIDPSFGFTKENGIEVSNALKLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  +L  NLY+ F ++DM +LEINPLI+M+NG L+ LD+K++FD NAL+R  DI 
Sbjct: 181 GNNIDECIELTSNLYRMFVERDMDMLEINPLIVMENGGLKCLDAKMAFDGNALFRQPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++E+EA +++LSYIALDG IGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ALRDETEEDAKELEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLKGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIITSD  VKGIL+NIFGGIMRCDV+ +G++ AVKEV + +PLV+RLE
Sbjct: 301 GGATAEKVTAAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVVEAVKEVGLTVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G  V  G  +I  S  +VI A DLDDAA KIV AVKG
Sbjct: 361 GTKVQEGKDIINNSPFDVIAADDLDDAAAKIVKAVKG 397


>gi|329847465|ref|ZP_08262493.1| succinyl-CoA ligase ADP-forming subunit beta [Asticcacaulis
           biprosthecum C19]
 gi|328842528|gb|EGF92097.1| succinyl-CoA ligase ADP-forming subunit beta [Asticcacaulis
           biprosthecum C19]
          Length = 401

 Score =  451 bits (1161), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/401 (59%), Positives = 297/401 (74%), Gaps = 4/401 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHE+QAKA+L+++ V V +G    S   A+ A +TL       ++VVKSQIHAGGRGK
Sbjct: 1   MNIHEHQAKAVLKEFGVAVPRGFPAYSPQEAKKAAETLAKEAGSKVFVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           GRF+ L  D+KGGVRV  +   V S+  E+LG  L+T QTGP G +VN +Y+E+GADI +
Sbjct: 61  GRFEGLGPDAKGGVRVVKTPDDVKSNADEMLGRVLVTIQTGPAGKQVNRLYIEEGADIAK 120

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYLSLLVDR S  V+ +AST+GGM IE+VA D P+KI    IDP  GV      +L   
Sbjct: 121 ELYLSLLVDRVSSKVSVVASTEGGMSIEDVAHDTPEKIHSFTIDPATGVWPTHARALAQA 180

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G     G  L   LY AF  KDM +LEINPLI+  + +L VLD+K SFD NAL+RH
Sbjct: 181 LNLKGDLAKQGAKLLSQLYAAFTAKDMDMLEINPLIVTGDDKLLVLDAKCSFDSNALFRH 240

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ ELRDV+EED +EIEA +++LSYIALDG IGCMVNGAGLAMAT+DIIKLYG  PANF
Sbjct: 241 PDMVELRDVTEEDEKEIEASKYDLSYIALDGEIGCMVNGAGLAMATLDIIKLYGSEPANF 300

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV AAFKIITSD  VKGIL+NIFGGIM+CD++ +G++ AVKEV + +PLV
Sbjct: 301 LDVGGGATTEKVTAAFKIITSDPKVKGILVNIFGGIMKCDIIAQGVIVAVKEVGLKVPLV 360

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +RLEG NV++G +++ ESGLNVI A DL DAA KIV AVKG
Sbjct: 361 VRLEGTNVELGKKILNESGLNVIAADDLADAAAKIVKAVKG 401


>gi|296532581|ref|ZP_06895286.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC
           49957]
 gi|296267072|gb|EFH12992.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC
           49957]
          Length = 398

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/397 (57%), Positives = 292/397 (73%), Gaps = 1/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLR+Y V V  G V  +   A  A + LPGP+YVVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQGKELLRRYGVAVLDGHVAWTAEEAAEAARKLPGPVYVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P + KGGVRV  S+  V +    ++G TL+TKQTGP G  V+ VYVEDG DI RELYL
Sbjct: 61  EDP-NGKGGVRVVKSVDDVKAAAEAMIGKTLVTKQTGPAGKVVSRVYVEDGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  +  +AST+GGM+IEEVA+  P+KI K ++DP  GV+      L   L L+
Sbjct: 120 SLLVDRDSSRIVIMASTEGGMEIEEVAEHNPEKILKAVVDPASGVSGFHCRKLAFGLGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           +YKAF + D +++EINPL++   G +  LD+K+SFDDNAL+RH D++
Sbjct: 180 GKQVASFTKFVTAMYKAFVELDCAIVEINPLVVTGAGEIVALDAKVSFDDNALFRHKDLE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SE D +E+EA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 240 ALRDDSEMDPKELEAVKHDLNYVALDGEIGCMVNGAGLAMATMDIIKLYGSSPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AF+IITSDS+VK IL+NIFGGI +CD++  GI+ A K + +++PLV+RLE
Sbjct: 300 GTATAERVTEAFRIITSDSNVKAILVNIFGGIAKCDMIANGIVVAAKNLTLSVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G +++AESGL +I A +L DAA+K+V AVKG
Sbjct: 360 GTNVDLGKKILAESGLAIIPADNLADAAEKVVRAVKG 396


>gi|148260623|ref|YP_001234750.1| succinyl-CoA synthetase, beta subunit [Acidiphilium cryptum JF-5]
 gi|326403817|ref|YP_004283899.1| succinyl-CoA ligase beta subunit [Acidiphilium multivorum AIU301]
 gi|189046870|sp|A5FYZ9|SUCC_ACICJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146402304|gb|ABQ30831.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidiphilium
           cryptum JF-5]
 gi|325050679|dbj|BAJ81017.1| succinyl-CoA ligase beta subunit [Acidiphilium multivorum AIU301]
          Length = 398

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/396 (56%), Positives = 291/396 (73%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y V V  G V  +   A  A + LPGP+YVVKSQIHAGGRG G FK
Sbjct: 1   MNIHEYQAKELLKSYGVAVLDGHVAWTGEEAAEAARKLPGPVYVVKSQIHAGGRGAGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P + KGGVR+  S + V +    +LG+TL+TKQTGP G  V  VYVE G DI RELYL
Sbjct: 61  DDP-EGKGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVVRRVYVEAGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    +  +AST+GGM+IEEVA+ +P+KI ++ +DP  G++      L   L L 
Sbjct: 120 SLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPASGISGFHARRLGFGLGLD 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        +YKAF   D +++EINPL++   G +  LD+K+SFDDNALYRH D++
Sbjct: 180 ATQMKAFAKFVNAMYKAFVALDCAIVEINPLVVTGAGEVVALDAKVSFDDNALYRHPDLE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +E+EA +H+L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 KLRDEAEEDPKELEAAKHSLNYVALDGSIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVTAAFKIILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLSVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV +G  ++++SGL +I A +L DAAQKIV AVK
Sbjct: 360 GTNVQLGKDILSKSGLPIIAADNLADAAQKIVAAVK 395


>gi|209965472|ref|YP_002298387.1| succinyl-CoA synthetase beta chain [Rhodospirillum centenum SW]
 gi|226734979|sp|B6IP72|SUCC_RHOCS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|209958938|gb|ACI99574.1| succinyl-CoA synthetase beta chain [Rhodospirillum centenum SW]
          Length = 398

 Score =  441 bits (1134), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/396 (57%), Positives = 299/396 (75%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK+LL+KY V V +G V  ++  A +  K L GP++VVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQAKSLLKKYGVAVPRGGVAYTLEEARAVAKELGGPVWVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P + KGGVRV  S+  V++    +LG  L+TKQTGP G  V  +YVE+GADI RELYL
Sbjct: 61  DDP-NGKGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +  +  +AST+GGM+IEEVA   P+KI K+ IDP+ G+       +   L L+
Sbjct: 120 SMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           +YKAF D DMSL+E+NPL++  +G +  LD+K++FDDNALYRH +I+
Sbjct: 180 GKQVGACTKFLLGMYKAFTDLDMSLVEVNPLVVTGSGEVLALDAKVNFDDNALYRHHEIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEE++ E EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 ELRDESEEEASETEATRHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD  V+GIL+NIFGGIMRCDV+  G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPHVEGILVNIFGGIMRCDVIADGVVAAAREVSLHVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGL +++A +L DAA+KIV AVK
Sbjct: 360 GTNVDLGKKILAESGLPILSADNLADAAEKIVKAVK 395


>gi|158319672|ref|YP_001512179.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|189046877|sp|A8MM16|SUCC_ALKOO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|158139871|gb|ABW18183.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus oremlandii
           OhILAs]
          Length = 386

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/396 (55%), Positives = 283/396 (71%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y VPV +G VI  V  A+ A   +   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKELLRDYGVPVPRGQVIYDVRDAQRAAWHIESDIAVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V    RE+LG TL+T QTG  G  V  + +E+G +I +E Y+
Sbjct: 58  -------GGVKIAKSITEVEQFSRELLGKTLVTHQTGQEGRVVKAILIEEGCEIYKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  +DR +  +A IAS +GGMDIEEVA + P KI K +IDPLIG+T      +C  L + 
Sbjct: 111 AFTLDRENSKIALIASEEGGMDIEEVAANRPDKILKEIIDPLIGLTDFQGRRVCFNLNID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLY+ F +KD SLLEINPL+I KN R+  LD+KI+FD N LYR+ D+ 
Sbjct: 171 GSLINDTVELMKNLYRCFIEKDCSLLEINPLVITKNNRVMALDAKINFDGNGLYRNEDVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD++EED +EIEA ++NLSYI+LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 KLRDLNEEDEKEIEASKYNLSYISLDGNIGCMVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKGI +NIFGGIM+CDV+ KGI++A  EVK+N+PLV+RLE
Sbjct: 291 GGASEEKVMNAFKIILSDPKVKGIFVNIFGGIMKCDVIAKGIVNAANEVKLNVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++ +S LN++TA  + D A+KIV  +K
Sbjct: 351 GTNVELGKEILNQSNLNIVTATTMADGAKKIVKLIK 386


>gi|144898023|emb|CAM74887.1| Succinyl-CoA synthetase beta chain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 398

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/396 (56%), Positives = 286/396 (72%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L KY V V KG V  +   A    K L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAIQVAKDLGGPVWVVKSQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S++ V +    +LG  L+T QTG  G  V  +YVE G DI RELYL
Sbjct: 61  G-DTSGKGGVRVVKSVEEVGAAADAMLGKVLVTVQTGEQGKEVKRIYVEQGCDIRRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            LL+DR++  V  +AST+GGM+IEEVA   P+KI K+ IDP+ G        L   L L 
Sbjct: 120 GLLIDRSTSRVTIMASTEGGMEIEEVAHKSPEKILKVAIDPVQGFQQYHGRQLAFGLGLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LYKAF D D S++EINPL++  + +L  LD+K++FDDNAL+RH DI+
Sbjct: 180 GKQVGAAVKFMGALYKAFMDLDCSIVEINPLVVTGDDQLIALDAKVNFDDNALFRHKDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD SEED  E+EA +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 240 EMRDESEEDPAELEAARHSLNYIKLDGSIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +I A +L DAA+K+V AVK
Sbjct: 360 GTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395


>gi|312113427|ref|YP_004011023.1| succinyl-CoA synthetase subunit beta [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218556|gb|ADP69924.1| succinyl-CoA synthetase, beta subunit [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 399

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/396 (57%), Positives = 284/396 (71%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKA+L++Y VPV KG    +   A +  K L GP+ VVK+QIHAGGRGKG FK
Sbjct: 1   MNVHEYQAKAILKEYGVPVPKGHAAFTPEEAFAVAKELGGPIAVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S   V +   E+LG TL+T QTGP G  V  + +E+GA I RELYL
Sbjct: 61  EPEAGEKGGVRIAKSFDDVRTFADEMLGRTLVTVQTGPEGRVVKRLLIEEGAAIKRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  VA IAST+GGMDIEEVA D P+KI    IDP  G +      +   L L+
Sbjct: 121 SFLVDRATSRVAVIASTEGGMDIEEVAHDAPEKILTFSIDPASGYSQFHGRKVAFELGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  +LYKAF +KDMS LEINPLI+ + G L  LD+K++FD NALYRH +I 
Sbjct: 181 GDQVKQCVKLIGSLYKAFVEKDMSQLEINPLIVTEKGDLVCLDAKLNFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+ A +++LSY+ LDG+IGC+VNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDLEEEDPAEVLASRYDLSYVKLDGSIGCLVNGAGLAMATMDIIKLYGSEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGIL+NIFGGIMRCD++ +GI++A +E+ + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIILSDPNVKGILVNIFGGIMRCDIIAEGIIAAAREMSLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  +I  SGL VI A +L DAA+KIV  VK
Sbjct: 361 GTNVELGKEIIRNSGLAVIPADNLADAAEKIVAEVK 396


>gi|190571356|ref|YP_001975714.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213018752|ref|ZP_03334560.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|226734997|sp|B3CME9|SUCC_WOLPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|190357628|emb|CAQ55069.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212995703|gb|EEB56343.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 386

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/396 (54%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NVPV KG V +S    E+ I  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILHKFNVPVPKGFVATSAEGVETQINQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++     ++ +LG TL+T QTGP+G +V  +Y+E+G+ I +E YL
Sbjct: 58  -------GGVKLAKSVEEAQQFVKNMLGITLVTHQTGPSGQQVRRIYIEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VD     + FI S++GGMDIEEVAK+ P KI K  IDP  G T+ D + L +   L 
Sbjct: 111 SLVVDPKLSRLVFIFSSEGGMDIEEVAKNSPTKIVKFDIDPATGFTNLDNSKLANNFNLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  N+Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 171 SEQIERITNIAKNIYDAFITTDASQIEINPLVETNSGDFVALDAKINFDDNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 QLRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 291 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +L DAAQKIV  VK
Sbjct: 351 GTNFEEGKKILEESGLNIIAADELGDAAQKIVKEVK 386


>gi|297183589|gb|ADI19716.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 386

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 289/396 (72%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY V V KGV   +V      +K+L    +V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGVVVPKGVFAFTVDELIEKVKSLKTEKFVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +++  +    +E+LG  LIT QTGP G  V  +YVE+   I +E YL
Sbjct: 58  -------GGVKILNNIDELTKASKELLGKRLITPQTGPEGKEVKRLYVEESTSIEKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR+S  +AFI+S QGGMDIEEVAK+ P+KI    ++    ++S+D   +  +  L+
Sbjct: 111 SCLVDRSSSKIAFISSDQGGMDIEEVAKNNPKKITTTKVNFNEDISSKDCEEIIKIFNLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G ++++   L  ++YK F   D SL+EINPLI+ K+ ++  LD+K++FDDN+L+RH DI 
Sbjct: 171 GNSKLEAISLIQSIYKMFLSTDASLVEINPLILTKDQKIVCLDAKVNFDDNSLFRHPDIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRDV+EED  EIEA +H+L+Y+ LDG+IGCMVNGAGLAMATMDIIK+YG  PANFLDVG
Sbjct: 231 KLRDVNEEDPTEIEASKHDLAYVKLDGSIGCMVNGAGLAMATMDIIKIYGEEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV++AFKII SD +VKGILINIFGGIMRCDVL +G++ A KE+KIN+PLV+RL 
Sbjct: 291 GGASKEKVSSAFKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEIKINVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++  SGL +I+A +LDDAA+K++ A+K
Sbjct: 351 GTNFEEGKKILNNSGLKIISADNLDDAAKKVIGAIK 386


>gi|114328734|ref|YP_745891.1| succinyl-CoA synthetase subunit beta [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316908|gb|ABI62968.1| succinyl-CoA synthetase beta chain [Granulibacter bethesdensis
           CGDNIH1]
          Length = 398

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/395 (54%), Positives = 288/395 (72%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+++ +PV +G V  +   A  A + LPGP YVVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKELLKEFGIPVLEGHVAWTPDEAREAARRLPGPRYVVKAQIHAGGRGAGHFL 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGVR+ +S++        +LG  L+TKQTG  G RV+ VY+E G +I RELYL
Sbjct: 61  H-SQSGRGGVRLAASVEEAGEHAAAMLGQILVTKQTGAAGRRVHRVYIEAGCEIERELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AS +GGMDIEEVA   P++I ++ +DP +G++      +   L L 
Sbjct: 120 SLLVDRDTSRVTIVASAEGGMDIEEVAASRPERIVRVTVDPAMGLSEFHARRIAFRLGLS 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYKA+   D +++EINPL++ K G +  LD+K+ FDDNALYRH +++
Sbjct: 180 GMQLASFGRMVKALYKAYIALDCAVVEINPLVVTKGGDMLALDAKVIFDDNALYRHPELE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+EA +H LSYIALDG IGCMVNGAGLAMATMDII+LYG  PANFLDVG
Sbjct: 240 RLRDPAEEDPKELEAARHKLSYIALDGTIGCMVNGAGLAMATMDIIRLYGAKPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAFKII +D +V+GILINIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVAAAFKIILADPNVEGILINIFGGIMRCDVIAEGVVAAAREVSLSVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  ++ +SGL+++ A DLDDAA+KIV AV
Sbjct: 360 GTNVEQGRAILNQSGLSIVAADDLDDAARKIVAAV 394


>gi|163792306|ref|ZP_02186283.1| succinyl-CoA synthetase, beta subunit [alpha proteobacterium
           BAL199]
 gi|159182011|gb|EDP66520.1| succinyl-CoA synthetase, beta subunit [alpha proteobacterium
           BAL199]
          Length = 389

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/396 (55%), Positives = 285/396 (71%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL K+ V V +G V  +   A  A + L GP++VVKSQIHA         
Sbjct: 1   MNIHEYQAKALLAKFGVAVPRGGVAFTPDEAVKAAEKLGGPVWVVKSQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL +V ++   +LG TL+T QTGP G  V  +Y+EDG DI RELYL
Sbjct: 52  -GGRGKGGGVKVVKSLDAVKAEAERMLGMTLVTHQTGPQGKEVKRLYIEDGCDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  IAST+GGMDIEEVA   P KI  + IDP++G+++     +   L L+
Sbjct: 111 SLLVDRATSRVTVIASTEGGMDIEEVAAHTPDKILSVAIDPVVGMSAHYARRIAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          +LYK+F D D S++EINPL++   G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 GKQVSAAVKFMISLYKSFVDLDASMMEINPLVVTGAGDIIALDAKMNFDDNALFRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED  E+EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 231 ELRDEDEEDPAELEAGKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLVGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+V AAFKII SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 291 GGATKDRVTAAFKIILSDKNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLHVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +++A +L DAA+KIV AVK
Sbjct: 351 GTNVELGKQILADSGLPIVSADNLGDAAEKIVKAVK 386


>gi|330994298|ref|ZP_08318226.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Gluconacetobacter
           sp. SXCC-1]
 gi|329758765|gb|EGG75281.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Gluconacetobacter
           sp. SXCC-1]
          Length = 399

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/396 (54%), Positives = 276/396 (69%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y +PV +G   ++   A  A + L  P+ VVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKALLRSYGMPVPEGRAATTAAEALEAARGLAAPVTVVKAQIHAGGRGAGHFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P + KGGVR+  SL  V +  R +LG  L+TKQTGP G +V  +Y+E G DI RELY 
Sbjct: 61  GRP-EGKGGVRLARSLDEVDAAARSMLGEVLVTKQTGPAGRKVRTLYIESGCDIARELYF 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR SG +  +AS  GGM+IEEVA   P++I K  +DP  G+       L   L L 
Sbjct: 120 SMLVDRVSGRIVIVASPDGGMEIEEVAARTPERILKEYVDPAKGLCDYQSRDLAVRLGLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A     ++    Y AF   D +++EINPL++  +G L  LD+K+SFD+NAL+RH ++ 
Sbjct: 180 GRAIRAFQNVVRAAYTAFTGLDAAIVEINPLVVTGSGDLLALDAKMSFDENALFRHPELA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED RE EA  + L+Y+ LDGNIGCMVNGAGLAMATMDIIK+ G  PANFLDVG
Sbjct: 240 RLRDEHEEDPREREAAGYGLAYVGLDGNIGCMVNGAGLAMATMDIIKMEGEEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAF+I+ SD  V+GIL+NIFGGIMRCDV+ + I++A  E  +N+PLV+RL 
Sbjct: 300 GGASKERVAAAFRILVSDPKVRGILVNIFGGIMRCDVIAEAIIAASHETGLNVPLVVRLA 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  L+AESGL +I A DL DAA+KIV AV+
Sbjct: 360 GTNVERGKALLAESGLTIIPADDLGDAARKIVAAVR 395


>gi|117925044|ref|YP_865661.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Magnetococcus
           sp. MC-1]
 gi|117608800|gb|ABK44255.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Magnetococcus
           sp. MC-1]
          Length = 388

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 278/396 (70%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK ++ K+ V V +G V  +   AE A K L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIIAKFGVNVPRGRVAYTPQEAEMAAKELDSEVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +  +V  +   +LG TL+T QTGP G  V  +YVE+G DI RELYL
Sbjct: 58  -------GGVKVVKTTDAVREEASRMLGLTLVTHQTGPEGKEVKRLYVEEGCDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V F+AST+GGM+IEEVA+  P+KI + ++DP +G+ +    +L   L L+
Sbjct: 111 GIVIDRATSRVTFMASTEGGMEIEEVAEKSPEKILREVVDPAVGLVAFQARNLAFGLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF + D SL+EINPL+I   G +  LD K++FD NALYR   I+
Sbjct: 171 GKQINKAVQLMSGLYNAFMETDASLMEINPLVITGAGDVIALDCKMNFDANALYRQKAIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE+ +EIEA +H L+YIALDGNIGCMVNGAGLAMATMDIIK+ GGAPANFLDVG
Sbjct: 231 ELRDFDEENPKEIEASKHELNYIALDGNIGCMVNGAGLAMATMDIIKIKGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+I SD +VK +L+NIFGGIMRCDV+  G++ A K+V +N+PL++RLE
Sbjct: 291 GGATTERVTEAFKLILSDENVKAVLVNIFGGIMRCDVIANGVVEAAKQVNLNVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL +I+A +LDDAA K V ++K
Sbjct: 351 GTNVEKGKEILANSGLPIISADNLDDAATKAVASLK 386


>gi|94313284|ref|YP_586493.1| succinyl-CoA synthetase subunit beta [Cupriavidus metallidurans
           CH34]
 gi|93357136|gb|ABF11224.1| succinyl-CoA synthetase, beta subunit [Cupriavidus metallidurans
           CH34]
          Length = 403

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/396 (54%), Positives = 288/396 (72%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR+Y+V V  G V  +   A  A + L GP++VVKSQIHAGGRG GRF 
Sbjct: 1   MNIHEYQAKELLRRYDVAVPNGCVAFTPEEAAQAARKLGGPIWVVKSQIHAGGRGAGRFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P+  KGGVRV  S+  V ++  ++LG+TL+TKQTGP G  V  +Y+E+G DI RELYL
Sbjct: 61  GDPS-GKGGVRVVKSIDEVQANASQMLGATLVTKQTGPAGREVRRLYIEEGCDIARELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR +  +  +AST+GGM+IEEVA   P+KI K+ IDP  G+       L   L L 
Sbjct: 120 GMLIDRATSRITVMASTEGGMEIEEVAAHTPEKILKVAIDPASGIQPFHARRLAFGLGLS 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          + Y+AF + D S++EINPL++  +G +  LD+K +FDDNAL+RH DI+
Sbjct: 180 GKQVAAATRFILSAYRAFTELDASIVEINPLVVTGSGDVIALDAKFNFDDNALFRHPDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD SEED  E EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 AMRDESEEDPAETEAARHALNYVRLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAF++I +D  V+GIL+NIFGGIMRCDV+ +G+++A ++V + +PLV+RLE
Sbjct: 300 GGATKERVTAAFRLILADPKVEGILVNIFGGIMRCDVIAEGVIAAARDVDLTVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++ +SGL +++A  L DAA+K+V AV+
Sbjct: 360 GTNVELGKTILRDSGLPILSANHLADAAEKVVAAVR 395


>gi|186473506|ref|YP_001860848.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
 gi|184195838|gb|ACC73802.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
          Length = 407

 Score =  418 bits (1075), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/396 (55%), Positives = 283/396 (71%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y V V  G V  +   AE A   L G ++VVKSQIHAGGRG GRF 
Sbjct: 1   MNIHEYQAKALLKGYGVAVPNGRVAFTPREAEDAALALGGAVWVVKSQIHAGGRGAGRFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P + KGGVRV  S+  V S   ++L   L+TKQTGP G  V  VYVE+G  I RELYL
Sbjct: 61  DDP-NGKGGVRVVKSVSDVGSSAEQMLAHVLVTKQTGPAGREVKRVYVEEGCAIERELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR++  +  +AST+GGM+IEEVA   P+KI K+ IDP  G+       L   L L 
Sbjct: 120 GMLIDRSTSRITVMASTEGGMEIEEVAAHTPEKILKVAIDPATGLQPFHARQLAFGLGLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          N Y+AF + D S++EINPL++ + G +  LD+KI+FDDNAL+RH  I+
Sbjct: 180 GKQVKSATQFIANAYRAFVELDASIVEINPLVVTQQGDVIALDAKINFDDNALFRHPAIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED+ E+EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 ALRDEAEEDAAELEAAKHGLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AF++I  D  V+GIL+NIFGGIMRCDV+  G++SA +EV + +PLV+RLE
Sbjct: 300 GGATRERVATAFRLILRDPKVEGILVNIFGGIMRCDVIADGVVSAAREVDLRVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +++A  L DAA K+V AVK
Sbjct: 360 GTNVELGKQILRDSGLPILSADHLADAASKVVAAVK 395


>gi|327441068|dbj|BAK17433.1| succinyl-CoA synthetase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 393

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 276/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V +G V  S   A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRQYGVAVPRGSVAFSPDEAVKAAKELGSNVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V S  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 58  -------GGVKIAKNLDEVRSFSKELLGKILVTHQTGPDGKEVKRLYIEEGSDIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK +IDP+ G+ +     +   + + 
Sbjct: 111 SLVLDRATSRVVMMGSEEGGMDIEEVAETNPEKIFKEVIDPVTGLNAFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L   +YKAF DKD S +EINPL++  + ++  LD+K +FD NALYRH DI 
Sbjct: 171 AKLVNKAVGLMLGIYKAFIDKDASTVEINPLVVTGDDQVVALDAKFNFDANALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 231 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ KG+++A KEV + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDIIAKGVITAAKEVGLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +L+ ESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKLLNESGLNIVAADSMSDGAQKIVKLVE 386


>gi|297623491|ref|YP_003704925.1| succinyl-CoA synthetase subunit beta [Truepera radiovictrix DSM
           17093]
 gi|297164671|gb|ADI14382.1| succinyl-CoA synthetase, beta subunit [Truepera radiovictrix DSM
           17093]
          Length = 407

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/409 (52%), Positives = 284/409 (69%), Gaps = 15/409 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQAK L++   V V +G V  +V  A +A++ L      P+ V+KSQIHAGGRGK
Sbjct: 1   MNIHEYQAKELMQARGVAVPQGAVARTVEEAVAAVRPLVEATGNPVVVLKSQIHAGGRGK 60

Query: 57  GRFKELPADS---------KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
           GRFKE P  +         KGGVR  ++ + V    + +LGSTL+T QTG +G +VN +Y
Sbjct: 61  GRFKEHPEVAGVNVITDGLKGGVR--ATEERVRELAKAMLGSTLVTVQTGESGKQVNRLY 118

Query: 108 VEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           +E G DI RELYLS+++DR  G    +AST+GG++IEEVA+  P+KI +  IDPL+G+ +
Sbjct: 119 IEQGIDIGRELYLSVVLDRAVGRNVMMASTEGGVEIEEVAERSPEKILREHIDPLVGLAN 178

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
              A L   L L G A  +G      L KA  + D  ++EINPL++ K G++  LD K+S
Sbjct: 179 FQAARLAHGLGLTGDALKNGVRFMRALAKAAEELDTDMIEINPLVVTKQGQVMALDGKMS 238

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           FD+NAL+RH  + E+RD SEED  E+EA  + LS+I LDG IGC+VNGAGLAMATMDIIK
Sbjct: 239 FDNNALFRHKMVAEMRDTSEEDPAELEASNYGLSFIKLDGTIGCLVNGAGLAMATMDIIK 298

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
             GG PANFLDVGGGA  + V AAFKIIT D +V+GI +NIFGGIM+CD +  G++ AV+
Sbjct: 299 HVGGEPANFLDVGGGATTENVTAAFKIITKDPNVRGIFVNIFGGIMKCDTIANGVVEAVR 358

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +V + +PLV+RLEG NVD+G R+I ESGLNV++A D+ D AQKIV   K
Sbjct: 359 QVGLEVPLVVRLEGTNVDLGKRIIDESGLNVVSAKDMKDGAQKIVELAK 407


>gi|296115264|ref|ZP_06833904.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295978167|gb|EFG84905.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 400

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/396 (55%), Positives = 285/396 (71%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR + +PV  G V +S   A SA + L  PL VVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKALLRSFGMPVPDGRVATSAEDAVSAARELAAPLTVVKAQIHAGGRGAGHFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
               D +GGVR+  + +      R +L  TL+TKQTGP G  V  VY+E G DI RELYL
Sbjct: 61  G-AGDDRGGVRLARTAEEAGHAARAMLERTLVTKQTGPQGRIVRKVYIESGCDIARELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G +A +AS++GGM+IEEVA  +P++I K +IDP +G+       L   L+L 
Sbjct: 120 SLLVDRANGRIAVVASSEGGMEIEEVAAAHPERILKAVIDPALGLCDYQSRDLAVKLDLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     ++    Y AFC  D +++EINPLI+  +G L  LD+K+SFDD+ALYRH  + 
Sbjct: 180 GRSIRAFQNVVRAAYDAFCGLDAAIVEINPLIVTGSGDLLALDAKMSFDDSALYRHPHLA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED RE EA +H L+Y+ LDG+IGCMVNGAGLAMATMDIIK+ G +PANFLDVG
Sbjct: 240 ELRDEDEEDPREREAARHGLAYVGLDGSIGCMVNGAGLAMATMDIIKMEGESPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VAAAF+I+ SD +V+GIL+NIFGGIMRCDV+ + I++A ++  +N+PLV+RL 
Sbjct: 300 GGATTERVAAAFRILMSDRNVRGILVNIFGGIMRCDVIAEAIIAASRDTGLNVPLVVRLA 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  L+AESGL +I A DL DAA+KIV AV+
Sbjct: 360 GTNVERGRALLAESGLTIIPADDLGDAARKIVAAVR 395


>gi|254445276|ref|ZP_05058752.1| succinyl-CoA synthetase, beta subunit subfamily [Verrucomicrobiae
           bacterium DG1235]
 gi|198259584|gb|EDY83892.1| succinyl-CoA synthetase, beta subunit subfamily [Verrucomicrobiae
           bacterium DG1235]
          Length = 438

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/395 (53%), Positives = 269/395 (68%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L  +Y +P  KG   SS    ES I +L   L VVKSQIHAGGRGKG F 
Sbjct: 46  MNIHEYQAKQLFEEYGIPCPKGSATSSSEEFESCIDSLGEGLVVVKSQIHAGGRGKGTFT 105

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV++  + +  I    ++LG+TL+T QTG  G +V  VY  +GADI +E YL
Sbjct: 106 D---GFKGGVKLAKTKEEAIEYANKMLGNTLVTIQTGEAGRKVQTVYFTEGADIEKEYYL 162

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AST+GGMDIE VA++ P KIFK+ +DP  G+    +  L   L L 
Sbjct: 163 AVLLDRATSRPVVVASTEGGMDIETVAEETPDKIFKVFVDPAYGLADFQLRELVTKLGLN 222

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L  NLY  FC+KD  ++E+NPLI    G +  LD+K+SFD NALYRH +I 
Sbjct: 223 KVESKNAAKLIRNLYTMFCEKDADMIEVNPLITTSTGEVLALDAKVSFDSNALYRHPEIV 282

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EED +EIEA +  LSYIALDG I C+VNGAGLAM+TMDIIK YGG+PANFLDVG
Sbjct: 283 ALRDLNEEDPKEIEASKFGLSYIALDGTIACLVNGAGLAMSTMDIIKHYGGSPANFLDVG 342

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII  D +VKGI +NIFGGIM CDV+  GI+ AVKEV + +PLV+RLE
Sbjct: 343 GGATKEQVVAAFKIILGDPNVKGIFVNIFGGIMDCDVIANGIVEAVKEVGLKLPLVVRLE 402

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +++   + DAAQKIV  V
Sbjct: 403 GNNVKAGKATLAGSGLTIVSGDSMADAAQKIVDLV 437


>gi|226313082|ref|YP_002772976.1| succinyl-CoA synthetase subunit beta [Brevibacillus brevis NBRC
           100599]
 gi|254778432|sp|C0ZFB3|SUCC_BREBN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226096030|dbj|BAH44472.1| succinyl-CoA synthetase beta chain [Brevibacillus brevis NBRC
           100599]
          Length = 386

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/396 (52%), Positives = 273/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILKQYGVKVPEGRVAFTVEEAVEAAKELGTQVNVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYASEILGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GGMDIEEVA + P+KIFK ++DP+ G+       L   + + 
Sbjct: 111 GVVVDRATGSVVMMASEEGGMDIEEVAANNPEKIFKEVVDPVTGLNGFQARRLAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          +LY+AF DKD S+ EINPL++  +G +  LD+K++FD NALYRH DI 
Sbjct: 171 KELINKAAKFMMSLYQAFVDKDASIAEINPLVVTGDGEVMALDAKLNFDSNALYRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED +EIEA + +LSYIALDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 ALRDLDEEDEKEIEASKFDLSYIALDGNIGCMVNGAGLAMATMDIVKFYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  VKGI +NIFGGIM+CDV+  G+++A K++K++ PLV+RLE
Sbjct: 291 GGATEEKVTEAFKIILRDEKVKGIFVNIFGGIMKCDVIANGVVNAAKQIKLDKPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGLN++ A  + D A+KIV  VK
Sbjct: 351 GTNVDLGKKILNESGLNIVAAESMADGAEKIVSLVK 386


>gi|315648147|ref|ZP_07901248.1| succinyl-CoA synthetase, beta subunit [Paenibacillus vortex V453]
 gi|315276793|gb|EFU40136.1| succinyl-CoA synthetase, beta subunit [Paenibacillus vortex V453]
          Length = 386

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 273/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A  A ++L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLKQYGVAVPNGKVAFTVEEAVEAAQSLGSPVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRAYAEEILGKVLVTHQTGPEGKEVKRLLIEEGCDIRKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK ++DP IG+ +     L   + + 
Sbjct: 111 GVVVDRATGRVVLMASEEGGTEIEEVAAATPEKIFKEVVDPAIGLQTFQARKLAYSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVGKAVQFMLALYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIMRCDV+  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPQVKGIFVNIFGGIMRCDVIATGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVDLGKQILAESGLNIVPADSMADGAQKIVSLVQ 386


>gi|261407994|ref|YP_003244235.1| succinyl-CoA synthetase subunit beta [Paenibacillus sp. Y412MC10]
 gi|329929282|ref|ZP_08283035.1| succinate-CoA ligase, beta subunit [Paenibacillus sp. HGF5]
 gi|261284457|gb|ACX66428.1| succinyl-CoA synthetase, beta subunit [Paenibacillus sp. Y412MC10]
 gi|328936651|gb|EGG33094.1| succinate-CoA ligase, beta subunit [Paenibacillus sp. HGF5]
          Length = 386

 Score =  415 bits (1066), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 273/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A  A ++L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLKQYGVAVPNGKVAFTVEEAVEAAQSLGSPVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRAYAEEILGKVLVTHQTGPEGKEVKRLLIEEGCDIRKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK ++DP IG+ +     L   + + 
Sbjct: 111 GVVVDRATGRVVMMASEEGGTEIEEVAAATPEKIFKEVVDPAIGLQTFQARKLAYSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVGKAVQFMLALYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIMRCDV+  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPQVKGIFVNIFGGIMRCDVIATGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVDLGKQILAESGLNIVPADSMADGAQKIVSLVQ 386


>gi|58584777|ref|YP_198350.1| succinyl-CoA synthetase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|75497787|sp|Q5GSB6|SUCC_WOLTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58419093|gb|AAW71108.1| Succinyl-CoA synthetase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 386

 Score =  415 bits (1066), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/396 (54%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NVPV KG V  S   AE+ I  L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILHKFNVPVPKGFVAMSAEEAETKINQLKSDVLVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +     ++ +LG TL+T QTGP G +V  VY+E+G+ I +E YL
Sbjct: 58  -------GGVKLAKSAEEAQQFVKGMLGITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++D      AFI S++GGMDIEEVAK++P KI KL ID      S D   L ++  L 
Sbjct: 111 SIVIDPKLSRPAFIFSSEGGMDIEEVAKNFPTKIVKLDIDYAADFASFDSRKLSNIFNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  N+Y  F   D + +EINPL+   +G    LD+KISFDDNALYRH +I 
Sbjct: 171 PEQIEKITNVAKNIYDTFIATDANQIEINPLVETNSGDFIALDAKISFDDNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI+ A K + I +PLV+RL 
Sbjct: 291 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVEAAKGMSIKVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G R++ ESGLN+I A +LD+AAQKIV  V+
Sbjct: 351 GTNFEKGKRILEESGLNIIAADELDEAAQKIVKEVE 386


>gi|56419743|ref|YP_147061.1| succinyl-CoA synthetase subunit beta [Geobacillus kaustophilus
           HTA426]
 gi|261419408|ref|YP_003253090.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y412MC61]
 gi|297530617|ref|YP_003671892.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. C56-T3]
 gi|319766223|ref|YP_004131724.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y412MC52]
 gi|81347630|sp|Q5L0N7|SUCC_GEOKA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56379585|dbj|BAD75493.1| succinyl-CoA synthetase beta subunit (succinate-CoA ligase beta
           subunit) [Geobacillus kaustophilus HTA426]
 gi|261375865|gb|ACX78608.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y412MC61]
 gi|297253869|gb|ADI27315.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. C56-T3]
 gi|317111089|gb|ADU93581.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y412MC52]
          Length = 386

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/396 (52%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKELGAPVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     L   + + 
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+ F DKD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI++A K+V + +PLV+RLE
Sbjct: 291 GGASEEKVREAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+I A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNIIAAESMADGAQKIVELVR 386


>gi|295399796|ref|ZP_06809777.1| succinyl-CoA synthetase, beta subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111692|ref|YP_003990008.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y4.1MC1]
 gi|294978199|gb|EFG53796.1| succinyl-CoA synthetase, beta subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216793|gb|ADP75397.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y4.1MC1]
          Length = 386

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/396 (52%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKELGSPVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     L   + + 
Sbjct: 111 GFVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVNQAAKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIM+CDV+  GI+ A K+V +N+PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNIVAAESMADGAQKIVELVR 386


>gi|42521007|ref|NP_966922.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|81652161|sp|Q73FW3|SUCC_WOLPM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|42410748|gb|AAS14856.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 383

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 272/396 (68%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  K+NVPV KG V +S    ++ +  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEVFHKFNVPVPKGFVATSAEEVKTQVSQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++     +++++G TL+T QTGP+G +V  VYVE+G+ I +E YL
Sbjct: 58  -------GGVKLAKSVEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++D       FI S++GGMDIEEVAK+ P KI K  IDP    TS D + L     L 
Sbjct: 111 SLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDIDP---ATSFDSSKLSSRFHLS 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   +Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 168 PEQIEKISNIAKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNALYRHPEIM 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ LSYI +DG+IGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 228 ELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 288 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +LD+AAQKIV  VK
Sbjct: 348 GTNFEEGKKILEESGLNIIAADELDEAAQKIVKEVK 383


>gi|299536763|ref|ZP_07050071.1| succinyl-CoA synthetase subunit beta [Lysinibacillus fusiformis
           ZC1]
 gi|298727775|gb|EFI68342.1| succinyl-CoA synthetase subunit beta [Lysinibacillus fusiformis
           ZC1]
          Length = 386

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/392 (52%), Positives = 273/392 (69%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  S   A    K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGKVAFSPDEAVKVAKELGSNVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 58  -------GGVKIAKNLDEVRTYAKELLGKILVTHQTGPEGKEVKRLYIEEGSDIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK ++DP++G+TS     +   + + 
Sbjct: 111 SLVLDRATSRVTVMGSEEGGMDIEEVAETNPEKIFKEVVDPVVGLTSFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+AF DKD S++EINPL++   G +  LD+K +FD NALYRH DI 
Sbjct: 171 ANLVGKAVKLMLGLYQAFIDKDASIVEINPLVVTGQGEVVALDAKFNFDANALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 231 ELRDFDEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SDS+VKGI +NIFGGIM+C+++ +G+++A KE+ + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDSNVKGIFVNIFGGIMKCNIIAEGVVTAAKEIGLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV++G  ++  SGLN++ A  + D AQKIV
Sbjct: 351 GTNVELGKEILNASGLNIVAADSMADGAQKIV 382


>gi|239826601|ref|YP_002949225.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. WCH70]
 gi|259511784|sp|C5D8V2|SUCC_GEOSW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|239806894|gb|ACS23959.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. WCH70]
          Length = 386

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/396 (52%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKELGSPVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     L   + + 
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F DKD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI+ A K+V +N+PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVEATKQVGLNLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+  A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNITAADSMADGAQKIVELVR 386


>gi|294085399|ref|YP_003552159.1| succinyl-CoA synthetase subunit beta [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664974|gb|ADE40075.1| succinyl-CoA synthetase, beta subunit [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 386

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/379 (55%), Positives = 268/379 (70%), Gaps = 10/379 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK LL  + VPV +G  + SV  A SA   L GP+YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQLLGGFGVPVPRGNAVFSVDDAVSAATELGGPVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+ +V     +ILG  L+T QTGP G  V  +YVEDG DI  ELY+
Sbjct: 58  -------GGVKVVKSVDAVRDAADDILGKVLVTHQTGPEGREVRRLYVEDGCDIASELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  V  IAS++GGMDIEEVA + P KI  L IDP  G+    V  +  +L L+
Sbjct: 111 SLLVDRASSRVTIIASSEGGMDIEEVAANQPDKIISLGIDPATGLQPHHVRRIARVLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G           +LYKAF D D SL+EINPL++   G L  LD+K+SFDDNALYRH D+Q
Sbjct: 171 GTTAKQLPSFLASLYKAFGDLDASLIEINPLVVTGAGDLLALDAKMSFDDNALYRHKDVQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E++A + +L+YI LDG+IGCMVNGAGLAMATMDII+L+G +PANFLDVG
Sbjct: 231 ELRDLTEEDPAEVKASEFDLNYIKLDGDIGCMVNGAGLAMATMDIIQLHGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII +D +VKGIL+NIFGGIMRCD++ +G++ A + + +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILTDDNVKGILVNIFGGIMRCDIIAEGVVMAARNLGLTKPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVI 379
           G NV  G +++AESGL++I
Sbjct: 351 GTNVAEGKKIMAESGLDII 369


>gi|302036210|ref|YP_003796532.1| succinyl-CoA synthetase subunit beta [Candidatus Nitrospira
           defluvii]
 gi|300604274|emb|CBK40606.1| Succinyl-CoA synthetase, beta subunit [Candidatus Nitrospira
           defluvii]
          Length = 392

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/395 (53%), Positives = 278/395 (70%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  ++ VPV +G  I+S  AA +    L  P++VVK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKQLFAQFGVPVPRGKEITSPEAAAAWASELNTPVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     +V    +E++G TLIT QTGP G +V+ + +E+GA+I +ELYL
Sbjct: 58  -------GGVKITKEKGAVAGIAKELIGKTLITHQTGPKGRKVHRLLLEEGANIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G   FIAST+GGM+IEEVA+  P+KI K  IDP +G    +  ++   L LQ
Sbjct: 111 SILVDRDTGWPTFIASTEGGMEIEEVAEKTPEKIIKEAIDPAVGFQGHNGRNVAFALGLQ 170

Query: 181 GQ--ARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               A I+    +  NLY+ F +K  +L+EINPLII K   L  LD K+SFDDN +++H 
Sbjct: 171 AMEPAVINPFVQMLGNLYRLFMEKHAALVEINPLIITKEKTLVALDGKVSFDDNGVFKHD 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+Q++RD++EED  EIEA  +NL+Y+ LDGNIGCMVNGAGLAMATMD+IKL G  PANFL
Sbjct: 231 DVQKMRDLNEEDPLEIEATANNLNYVKLDGNIGCMVNGAGLAMATMDVIKLAGSEPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA +D VAA F+I+  D +VKGI INIFGGI+RC+ +  G++ A KEVKI +PLV+
Sbjct: 291 DVGGGATKDTVAAGFRILLKDPNVKGIFINIFGGIVRCERIAHGVIEAAKEVKITVPLVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL+G N D G +L+AESGL +  A DL +AAQKIV
Sbjct: 351 RLQGTNADEGRKLLAESGLKLEVANDLWEAAQKIV 385


>gi|23098998|ref|NP_692464.1| succinyl-CoA synthetase subunit beta [Oceanobacillus iheyensis
           HTE831]
 gi|22777226|dbj|BAC13499.1| succinyl-CoA synthetase beta subunit [Oceanobacillus iheyensis
           HTE831]
          Length = 386

 Score =  411 bits (1057), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/396 (52%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V  G V  +V  A  A + L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLREYGVKVPNGYVAYTVDEAVQAAEKLGTSVNVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  +AS +GG +IEEVA+  P+KIFK +IDP++G+T      L   + + 
Sbjct: 111 GVVLDRATSRVVMMASEEGGTEIEEVAEATPEKIFKEVIDPVVGLTPFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY AF  KD S+ EINPL+   +G +  LD+K++FDDNALYRH DIQ
Sbjct: 171 EDLLGKAVKFMSGLYDAFVAKDCSIAEINPLVTTGDGEVLALDAKLNFDDNALYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD  EED +EI+A +++LSY++LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 DLRDFEEEDEKEIQASKYDLSYVSLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K++ + IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQIGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +++ ESGLN+ TA  + D A+KIV AVK
Sbjct: 351 GTNVDAGKKILDESGLNITTATSMADGAEKIVAAVK 386


>gi|311030144|ref|ZP_07708234.1| succinyl-CoA synthetase subunit beta [Bacillus sp. m3-13]
          Length = 386

 Score =  411 bits (1057), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/399 (53%), Positives = 275/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGRVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V     EILG TLIT QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVREYAGEILGKTLITHQTGPEGKEVKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK ++DP++G+T      +   +   
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAEQTPEKIFKEVVDPVVGLTGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA         +LY AF +KD S+ EINPL++  + ++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMSLYTAFVEKDCSIAEINPLVVTGDAKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI E RD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK YGG PANF
Sbjct: 227 KDILEYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++  G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDDNVKGIFVNIFGGIMKCDIIATGVVEAAKQVGLEVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NVD+G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVDLGKQILRESGLNIVAAESMADGAQKIVAQV 385


>gi|304404233|ref|ZP_07385895.1| succinyl-CoA synthetase, beta subunit [Paenibacillus
           curdlanolyticus YK9]
 gi|304347211|gb|EFM13043.1| succinyl-CoA synthetase, beta subunit [Paenibacillus
           curdlanolyticus YK9]
          Length = 386

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/396 (53%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVLVPEGKVAFTVDEAVEAAKELGTSVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TLIT QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVKAYASEILGKTLITHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK ++DP IG+ +     L   + + 
Sbjct: 111 GVVVDRGTGRVVLMASEEGGTEIEEVAAHSPEKIFKEIVDPAIGLQAFQAKRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALYRH DI 
Sbjct: 171 KELVNKAAGFMIALYTAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHADIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED +EI+A + +LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ALRDLDEEDEKEIQASKFDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKGI +NIFGGIMRCDV+ +G+++A KE+ ++ PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDEKVKGIFVNIFGGIMRCDVIAEGVIAAAKELGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV  VK
Sbjct: 351 GTNVELGKKMLNESGLNIVAADSMADGAQKIVALVK 386


>gi|225165681|ref|ZP_03727483.1| Succinate--CoA ligase (ADP-forming) [Opitutaceae bacterium TAV2]
 gi|224800070|gb|EEG18497.1| Succinate--CoA ligase (ADP-forming) [Opitutaceae bacterium TAV2]
          Length = 393

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/395 (51%), Positives = 272/395 (68%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKAL +KY VP  KG+ + S    ++A+   P    VVKSQIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKALFQKYGVPAPKGIPVKSPAEFKTALAEFPPGPVVVKSQIHAGGRGKGVFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV+   +    +   +++ G+TL+T QTGP G +V+ VY  +   I  E YL
Sbjct: 61  D---GFKGGVKFAQNKDDALEYAKKMFGNTLVTAQTGPAGRKVHTVYFTEACKIRNEYYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT+     +AST+GG++IE+VAK+ P KIFK+LIDP  G+   +V  L   L L 
Sbjct: 118 AILLDRTTSKPVIVASTEGGIEIEKVAKETPDKIFKVLIDPAFGLADFEVRELIFDLGLN 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L  NLY+ F + D S++E+NPL+   + ++  LD+K+SFDDNAL+RH +I 
Sbjct: 178 PAESKNAAKLIKNLYQMFWETDASMVEVNPLVTTMDDQVLALDAKVSFDDNALFRHPEIV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD++EED +EIEA + NLSYIALDGNI C+VNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 238 AYRDLNEEDPKEIEASKFNLSYIALDGNIACLVNGAGLAMSTMDIIKHYGGNPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII  D +VKGI +NIFGGIM C+V+  GI+ AVKE  + +PLV+RLE
Sbjct: 298 GGATKEQVVAAFKIILGDKNVKGIFVNIFGGIMDCNVIATGIVEAVKETGLKLPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +++   + DAAQKIV  V
Sbjct: 358 GNNVAAGKATLASSGLTIVSGDSMADAAQKIVKLV 392


>gi|138894729|ref|YP_001125182.1| succinyl-CoA synthetase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247652|ref|ZP_03146354.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. G11MC16]
 gi|166979701|sp|A4IM83|SUCC_GEOTN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|134266242|gb|ABO66437.1| Succinyl-CoA synthase, beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212436|gb|EDY07193.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. G11MC16]
          Length = 386

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/396 (52%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKALGTSVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  +DP +G+ +     L   + + 
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F DKD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI++A K+V + +PLV+RLE
Sbjct: 291 GGASEEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+  A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNITAAESMADGAQKIVELVR 386


>gi|169827109|ref|YP_001697267.1| succinyl-CoA synthetase subunit beta [Lysinibacillus sphaericus
           C3-41]
 gi|168991597|gb|ACA39137.1| Succinyl-CoA synthetase beta chain [Lysinibacillus sphaericus
           C3-41]
          Length = 391

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/392 (52%), Positives = 270/392 (68%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  S   A    K L   + VVK+QIHAGGRGK    
Sbjct: 6   MNIHEYQGKEILRKYGVAVPNGKVAFSPDEAVKVAKELGSNVTVVKAQIHAGGRGKA--- 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 63  -------GGVKIAKNLDEVRTYAKELLGKILVTHQTGPEGKEVKRLYIEEGSDIQKEYYL 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK ++DP++G+TS     +   + + 
Sbjct: 116 SLVLDRATSRVTMMGSEEGGMDIEEVAETNPEKIFKEVVDPVVGLTSFQARRMAFNMNIP 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+AF DKD S++EINPL++   G +  LD+K +FD NALYRH DI 
Sbjct: 176 ANLVGKAVKLMLGLYQAFIDKDASIVEINPLVVTGQGEVVALDAKFNFDANALYRHKDIV 235

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 236 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 295

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIM+C+++ +G+++A KE+ + +PLV+RLE
Sbjct: 296 GGATAEKVTEAFKIILSDPHVKGIFVNIFGGIMKCNIIAEGVVTAAKEIGLAVPLVVRLE 355

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV++G  ++  SGLN++ A  + D AQKIV
Sbjct: 356 GTNVELGKEILNASGLNIVAADSMADGAQKIV 387


>gi|56964046|ref|YP_175777.1| succinyl-CoA synthetase subunit beta [Bacillus clausii KSM-K16]
 gi|81365977|sp|Q5WFP4|SUCC_BACSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56910289|dbj|BAD64816.1| succinyl-CoA synthetase beta subunit [Bacillus clausii KSM-K16]
          Length = 386

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/399 (53%), Positives = 269/399 (67%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR Y V V  G V  SV  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRSYGVAVPNGKVAFSVDEAVEAAKELGSSVSVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAEEILGKTLVTHQTGPAGKEVKRLLIEEGCDIKSEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L+VDR +  V  +AS +GG +IEEVA+  P+KIFK +IDP +G+       +   +   
Sbjct: 111 GLVVDRATSSVVLMASEEGGTEIEEVAEKTPEKIFKEVIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+ F DKD S+ EINPL+   +G++  LD+K +FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYQVFVDKDASIAEINPLVTTGDGKVMALDAKFNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED +EIEA +H+L+YIALDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLEEEDVKEIEASKHDLNYIALDGNIGCMVNGAGLAMATMDIIKHYNGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFK+I SD +VKGI +NIFGGIM+CD++  G+++A KEV + IPLV
Sbjct: 287 LDVGGGATAEKVTEAFKLILSDENVKGIFVNIFGGIMKCDIIADGVIAATKEVGLEIPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN+  A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKMLKESGLNITAADSMADGAQKIVSLV 385


>gi|126654067|ref|ZP_01725893.1| succinyl-CoA synthetase subunit beta [Bacillus sp. B14905]
 gi|126589447|gb|EAZ83594.1| succinyl-CoA synthetase subunit beta [Bacillus sp. B14905]
          Length = 386

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/392 (52%), Positives = 270/392 (68%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  S   A    K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGKVAFSPDEAVKVAKELGSNVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 58  -------GGVKIAKNLDEVRTYAKELLGKILVTHQTGPEGKEVKRLYIEEGSDIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK ++DP++G+TS     +   + + 
Sbjct: 111 SLVLDRATSRVTMMGSEEGGMDIEEVAETNPEKIFKEVVDPVVGLTSFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+AF DKD S++EINPL++   G +  LD+K +FD NALYRH DI 
Sbjct: 171 ANLVGKAVKLMLGLYQAFIDKDASIVEINPLVVTGQGDVVALDAKFNFDANALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 231 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIM+C+++ +G+++A KE+ + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDPHVKGIFVNIFGGIMKCNIIAEGVVTAAKEIGLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV++G  ++  SGLN++ A  + D AQKIV
Sbjct: 351 GTNVELGKEILNASGLNIVAADSMADGAQKIV 382


>gi|218288278|ref|ZP_03492577.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|258511357|ref|YP_003184791.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|218241637|gb|EED08810.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|257478083|gb|ACV58402.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 384

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L ++ V V +G V  +V  A  A K L G   VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKAILAEFGVKVPRGKVAFTVEEAVEAAKELGGKA-VVKAQIHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V ++ RE+LG  L+T QTGP G  V  + +E+  +I +E Y+
Sbjct: 57  -------GGVKVSKSLEEVEANARELLGKRLVTHQTGPQGRIVRRLLIEELTNIQKEYYI 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+ G +  +AS +GG++IEEVA  +P+KIF+  IDPL G+T     +L   LEL 
Sbjct: 110 GLVLDRSQGRLVMMASQEGGVEIEEVAAKHPEKIFRETIDPLTGLTPFQANNLAYKLELP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A          LY A+  KD S+ EINPL++   G +  LD+K++FDDNALYRH +I 
Sbjct: 170 QDAVKKAAQFMMALYNAYVAKDCSIAEINPLVLTAEGDIIALDAKLNFDDNALYRHPEIV 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED +EIEA ++ LSYIALDGNIGCMVNGAGLAMATMD IK YGG PANFLDVG
Sbjct: 230 SLRDEDEEDPKEIEASKYGLSYIALDGNIGCMVNGAGLAMATMDTIKYYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD  VKGIL+NIFGGIM+CDV+  G+++A K+V ++ PLV+RLE
Sbjct: 290 GGASEEKVTAAFKIILSDPKVKGILVNIFGGIMKCDVIANGVVAAAKQVGLDKPLVVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G +++ ESGL ++ A  L DAAQKIV  V
Sbjct: 350 GTNVEAGKKILNESGLKLVAADSLADAAQKIVALV 384


>gi|170717677|ref|YP_001784752.1| succinyl-CoA synthetase subunit beta [Haemophilus somnus 2336]
 gi|189030246|sp|B0UUF3|SUCC_HAES2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|168825806|gb|ACA31177.1| succinyl-CoA synthetase, beta subunit [Haemophilus somnus 2336]
          Length = 389

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 277/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV KG V  +V  A SAI+ L G  ++ K QIHAGGRGK    
Sbjct: 1   MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKLSGSQWIAKCQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V S   + LG  L+T QT   G  ++ +Y+E  A+I +ELYL
Sbjct: 58  -------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR+S  + F+AS++GGMDIEEVA+  P  + ++ IDPL+G        L   L L 
Sbjct: 111 SAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SLLEINPL+I+KN  L  LD+K+  DDNALYRH D+ 
Sbjct: 171 GKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRHPDLF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+++ED RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 SMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII +DS+VK +L+NIFGGI+RCD++ KGI+SA+ E+ +++P+++RLE
Sbjct: 291 GGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVSVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A+S LN+I    L +AA++ V+A K
Sbjct: 351 GTNADLGREILAQSNLNLIAVNSLTEAAEQAVNAAK 386


>gi|52080211|ref|YP_079002.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis ATCC
           14580]
 gi|52785588|ref|YP_091417.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis ATCC
           14580]
 gi|319646010|ref|ZP_08000240.1| succinyl-CoA ligase subunit beta [Bacillus sp. BT1B_CT2]
 gi|81385581|sp|Q65JP0|SUCC_BACLD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52003422|gb|AAU23364.1| succinyl-CoA synthetase (beta subunit) [Bacillus licheniformis ATCC
           14580]
 gi|52348090|gb|AAU40724.1| SucC [Bacillus licheniformis ATCC 14580]
 gi|317391760|gb|EFV72557.1| succinyl-CoA ligase subunit beta [Bacillus sp. BT1B_CT2]
          Length = 386

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/400 (51%), Positives = 277/400 (69%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A  A + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVAVPEGKVAFTADEAVKAAEALSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +   E+LG TL+T QTGP G ++  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+ S     +   +   
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LYKAF +KD S+ EINPL++  +G++  LD+K++FD NALYR 
Sbjct: 171 KELVGQAV----KFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANF
Sbjct: 227 KDILEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NVD+G +++ +SGLN+ +A  + D AQKIV  VK
Sbjct: 347 VRLEGTNVDLGKKILDDSGLNITSAESMADGAQKIVSLVK 386


>gi|262277898|ref|ZP_06055691.1| succinyl-CoA synthase, beta subunit [alpha proteobacterium HIMB114]
 gi|262225001|gb|EEY75460.1| succinyl-CoA synthase, beta subunit [alpha proteobacterium HIMB114]
          Length = 386

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/396 (52%), Positives = 276/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+K+  PV  G  + S+   E+A K +     V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKEILKKFGAPVPNGCPVFSLDELEAAAKKITTNKIVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++L  +  + +E+ G  L+T QTGP G  V  +Y+ED ++I +ELYL
Sbjct: 58  -------GGVKLVNNLNELKKEAKELFGKVLVTHQTGPQGREVKRLYLEDASEIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  +AFI+S +GGMDIEEVA   P+KI    +     V  +DV  +     L 
Sbjct: 111 SCLVDRATSKIAFISSAEGGMDIEEVAAKTPEKIITTRVGIEDKVNDKDVLDILKPFNLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  +   LY++    D +L+E+NPLI+ K+ ++  LD+KI+FDDNAL+RH +I 
Sbjct: 171 GNALEDGKKIVQALYQSLIKTDANLIEVNPLILTKDNKVICLDAKINFDDNALFRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED  EIEA +++L+YI LDG IGCMVNGAGLAMATMDII LYG  PANFLDVG
Sbjct: 231 ELRDQNEEDPMEIEASKYDLAYIKLDGQIGCMVNGAGLAMATMDIINLYGSEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD +VKGILINIFGGIMRCDV+ +G+++A KE ++NIPLV+RL 
Sbjct: 291 GGASKEKVTAAFKIILSDKNVKGILINIFGGIMRCDVIAEGVIAAAKETELNIPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G  ++  SGL +I A DL+DAA+KIV A+K
Sbjct: 351 GTNFEKGKEILNNSGLKIIPADDLNDAAKKIVEAIK 386


>gi|113461100|ref|YP_719168.1| succinyl-CoA synthetase subunit beta [Haemophilus somnus 129PT]
 gi|123031314|sp|Q0I3A8|SUCC_HAES1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|112823143|gb|ABI25232.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Haemophilus
           somnus 129PT]
          Length = 389

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 277/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV KG V  +V  A SAI+ L G  ++ K QIHAGGRGK    
Sbjct: 1   MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKLSGSQWIAKCQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V S   + LG  L+T QT   G  ++ +Y+E  A+I +ELYL
Sbjct: 58  -------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR+S  + F+AS++GGMDIEEVA+  P  + ++ IDPL+G        L   L L 
Sbjct: 111 SAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SLLEINPL+I+KN  L  LD+K+  DDNALYRH D+ 
Sbjct: 171 GKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRHPDLF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+++ED RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 SMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII +DS+VK +L+NIFGGI+RCD++ KGI+SA+ E+ +++P+++RLE
Sbjct: 291 GGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVSVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A+S LN+I    L +AA++ V+A K
Sbjct: 351 GTNADLGCEILAQSNLNLIAVNSLTEAAEQAVNAAK 386


>gi|321315375|ref|YP_004207662.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BSn5]
 gi|320021649|gb|ADV96635.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BSn5]
          Length = 385

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/395 (51%), Positives = 272/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A  + K+L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG TLIT QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLDEVKAYAEELLGKTLITHQTGPDGQVIKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|15615033|ref|NP_243336.1| succinyl-CoA synthetase subunit beta [Bacillus halodurans C-125]
 gi|21264053|sp|Q9KA20|SUCC_BACHD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|10175090|dbj|BAB06189.1| succinyl-CoA synthetase (beta subunit) [Bacillus halodurans C-125]
          Length = 386

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/400 (54%), Positives = 271/400 (67%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLR+Y V V  G V  SV  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRQYGVAVPNGKVAFSVDEAVEAAKELGSNVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK +IDP++G+       L   +   
Sbjct: 111 GLVLDRATSRVVMMASEEGGTEIEEVAEKTPEKIFKEIIDPVVGLQGFQARRLAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LYK F +KD S+ EINPL+   +G++  LD+K++FD NALYR 
Sbjct: 171 KELVGQAV----KFMLGLYKVFVEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             I E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KAILEFRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYNGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD SVKGI +NIFGGIM+CDV+ +G++ A KEV ++IPLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDESVKGIFVNIFGGIMKCDVIAEGVIQATKEVGLSIPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NVD+G + + ESGLN+  A  + D AQKIV  VK
Sbjct: 347 VRLEGTNVDLGKKKLEESGLNITAADSMADGAQKIVSLVK 386


>gi|16078672|ref|NP_389491.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309484|ref|ZP_03591331.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313809|ref|ZP_03595614.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318733|ref|ZP_03600027.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323004|ref|ZP_03604298.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|3183562|sp|P80886|SUCC_BACSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta; AltName: Full=Vegetative protein 63;
           Short=VEG63
 gi|2462967|emb|CAA04419.1| putative succinyl-coA synthetase beta chain [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|2633981|emb|CAB13482.1| succinyl-CoA synthetase (beta subunit) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291484160|dbj|BAI85235.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           natto BEST195]
          Length = 385

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 272/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A  + K+L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|99034389|ref|ZP_01314405.1| hypothetical protein Wendoof_01000792 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225677209|ref|ZP_03788202.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590733|gb|EEH11967.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 383

 Score =  408 bits (1048), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/396 (53%), Positives = 273/396 (68%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NVPV KG V +S    ++ +  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEVLHKFNVPVPKGFVATSAEEVKTQVSQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++     +++++G TL+T QTGP+G +V  VYVE+G+ I +E YL
Sbjct: 58  -------GGVKLAKSVEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++D       FI S++GGMDIEEVAK+ P KI K  IDP    TS D + L     L 
Sbjct: 111 SLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDIDP---ATSFDSSKLSSSFHLS 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   +Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 168 PEQIEKISNIAKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNALYRHPEIM 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ LSYI +DG+IGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 228 ELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 288 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +LD+AAQKIV  VK
Sbjct: 348 GTNFEEGKKILEESGLNIIAADELDEAAQKIVKEVK 383


>gi|89098658|ref|ZP_01171540.1| succinyl-CoA synthetase subunit beta [Bacillus sp. NRRL B-14911]
 gi|89086620|gb|EAR65739.1| succinyl-CoA synthetase subunit beta [Bacillus sp. NRRL B-14911]
          Length = 386

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/395 (52%), Positives = 273/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVTVPNGKVAFTVEEAVEAAKELGTEVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYASEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP+IG+T+     +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAEKTPEKIFKEEIDPVIGLTAFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LY A+ +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 GKLVNQAAKFMLALYNAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 EYRDLEEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIAEGVVEAAKQVGLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++AES +++I A  + D A+KIV  V
Sbjct: 351 GTNVDLGKKILAESDIDIIAADSMSDGAEKIVSLV 385


>gi|251797456|ref|YP_003012187.1| succinyl-CoA synthetase subunit beta [Paenibacillus sp. JDR-2]
 gi|247545082|gb|ACT02101.1| succinyl-CoA synthetase, beta subunit [Paenibacillus sp. JDR-2]
          Length = 386

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/396 (52%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  SV  A  A ++L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPEGKVAFSVDEAVEAAQSLGTPVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V +   EILG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKNIDEVRAYASEILGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +G V  +AS +GG +IEEVA   P+KI K +IDP IG+       L   + + 
Sbjct: 111 GVVIDRGTGRVTMMASEEGGTEIEEVAAHSPEKIIKEVIDPAIGLQVFQARKLAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALYRH DI 
Sbjct: 171 SELVNKAVKFMIALYTAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED++EIEA +++LSYIAL+GNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ALRDLEEEDAKEIEASKYDLSYIALEGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIMRCDV+  G+++A +E+ ++ PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDENVKGIFVNIFGGIMRCDVIADGVIAAARELGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV+ VK
Sbjct: 351 GTNVELGKKMLNESGLNIVAADSMADGAQKIVNLVK 386


>gi|196232107|ref|ZP_03130962.1| succinyl-CoA synthetase, beta subunit [Chthoniobacter flavus
           Ellin428]
 gi|196223829|gb|EDY18344.1| succinyl-CoA synthetase, beta subunit [Chthoniobacter flavus
           Ellin428]
          Length = 396

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/396 (52%), Positives = 271/396 (68%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQA+ L  K+ V   KG V ++   A +  + L    +VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQARELFEKFGVATTKGGVAATPDEAVAVAEKLGTKEFVVKAQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S+  V     ++LG  L+T QTGP G +VN V + + A I RELY 
Sbjct: 61  N---GFKGGVQITDSIGKVRELATQMLGQVLVTHQTGPEGKQVNKVLIAEPATIARELYF 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR SG    IAST+GG+DIE VA+  P+KIF+  I P +G+       +   L L 
Sbjct: 118 AILLDRASGAPVVIASTEGGVDIESVAEHTPEKIFREPIHPTLGLQPFQTRKIARALGLS 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF N++K F  +D S +E+NPL++   G +  LD+K +FDDNALYR  +I 
Sbjct: 178 GAQINAAAKLFTNMFKLFLARDCSQIEVNPLVVTDKGEILALDAKFNFDDNALYRQPEIV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED RE+ A ++NL+YI LDGNI C+VNGAGLAMATMDII+  GG PANFLDVG
Sbjct: 238 ALRDKSEEDPREVAASEYNLNYIGLDGNIACLVNGAGLAMATMDIIQYAGGKPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+V AAFKII SD +V+GIL+NIFGGIM C+V+  GI++A KEV + IPLV+RLE
Sbjct: 298 GGASKDQVTAAFKIILSDPNVEGILVNIFGGIMDCNVIATGIVAAAKEVGLKIPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G + +AESGL +I+A DL DAA+KIV  VK
Sbjct: 358 GNNVEAGKKTLAESGLALISASDLADAAKKIVAEVK 393


>gi|296330824|ref|ZP_06873299.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674342|ref|YP_003866014.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151829|gb|EFG92703.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412586|gb|ADM37705.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 385

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAKNLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKVVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|322382314|ref|ZP_08056221.1| succinyl-CoA synthetase subunit beta-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153667|gb|EFX46042.1| succinyl-CoA synthetase subunit beta-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 386

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/396 (52%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V +G V  S   A  A K L  P+ V+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRQYGVSVPQGKVAFSPEEAVEAAKALGTPVVVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   E+LG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKIAKNLDEVRTYAGELLGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRGTGRIVMMASEEGGTEIEEVAAKTPEKIFKEVVDPAIGLQPFQARKLAYAVHIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALY+H DI 
Sbjct: 171 DELVNKAVKFMMALYDAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYQHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A + +LSYIALDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIQASKFDLSYIALDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKG+ INIFGGIMRCDV+ KG+++AVKE+ ++ PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDEKVKGVFINIFGGIMRCDVIAKGVVAAVKELGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGQQILNESGLNIVAADSMADGAQKIVSLVQ 386


>gi|56552377|ref|YP_163216.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761577|ref|ZP_04759664.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753943|ref|YP_003226836.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|81354789|sp|Q5NMF5|SUCC_ZYMMO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56543951|gb|AAV90105.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241373885|gb|EER63418.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258553306|gb|ACV76252.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 398

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/396 (54%), Positives = 270/396 (68%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNI+EYQA ALL +  V V  G + ++V  A  A + L  P YV+KSQI AGGRGKG F+
Sbjct: 1   MNIYEYQAMALLNERGVSVVPGYMAANVEEAVKAAEQLSSPPYVIKSQILAGGRGKGYFR 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P +  GGVR+ S + +V      +LG  L+T QT   G  V  + + +   I RE YL
Sbjct: 61  ESPKEG-GGVRLVSDIAAVKKQAESMLGRHLVTAQTDDQGIPVEKLLITEAVSIAREFYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G V F+AS +GGMDIE VAK+ P+ I ++ IDP  G        +   L L 
Sbjct: 120 SLLVDRQTGRVTFVASPEGGMDIETVAKEKPEAIHRIAIDPATGFQPHHGRMIGFALGLS 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L  +LYKAF   DMSLLEINPL+   +G+L  +D+KISFDDNAL+RH DI 
Sbjct: 180 GDVFKQGIKLAASLYKAFTTSDMSLLEINPLVETNDGKLLPVDAKISFDDNALFRHPDIA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L +    D  E EA+Q  LSYI LDG+IGCMVNGAGLAM TMDII+L+G  PANFLDVG
Sbjct: 240 ALGEAGASDPLEQEARQAGLSYIKLDGSIGCMVNGAGLAMGTMDIIQLHGEMPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAF+II SD SVKGIL+NIFGGIMRCD+L +GI++A +E+ I +PLV+RLE
Sbjct: 300 GGASKEKVAAAFRIILSDPSVKGILVNIFGGIMRCDILAEGIIAAARELDITVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G   +  SGL +ITA DL DAAQKIV A++
Sbjct: 360 GNNVNEGKAALVSSGLPIITASDLGDAAQKIVAAIR 395


>gi|229019031|ref|ZP_04175872.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1273]
 gi|229025277|ref|ZP_04181697.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1272]
 gi|228736030|gb|EEL86605.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1272]
 gi|228742271|gb|EEL92430.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1273]
          Length = 386

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|149183634|ref|ZP_01862051.1| succinyl-CoA synthetase subunit beta [Bacillus sp. SG-1]
 gi|148848651|gb|EDL62884.1| succinyl-CoA synthetase subunit beta [Bacillus sp. SG-1]
          Length = 386

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR   V V  G V  +   A  A KTL   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRNNGVAVPNGKVAFTADEAVEAAKTLDSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V +   E+LG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSVDEVRTYAEELLGKTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA + P+KIFK  IDP++G+T      +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAAETPEKIFKEYIDPVVGLTGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY  +  KD S++EINPL++   G +  LD+K +FD NALYR  ++ 
Sbjct: 171 KELVNKAAKFMLGLYNVYIQKDASIVEINPLVVTGGGDVMALDAKFNFDSNALYRQKNVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 ELRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ +G++ A K+V++ +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDENVKGIFVNIFGGIMKCDIIAEGVVEAAKQVELTVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN+I A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILNESGLNIIAAQSMADGAQKIVEQV 385


>gi|162148723|ref|YP_001603184.1| succinyl-CoA synthetase beta chain [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545510|ref|YP_002277739.1| succinyl-CoA synthetase subunit beta [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787300|emb|CAP56894.1| putative succinyl-CoA synthetase beta chain [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533187|gb|ACI53124.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 404

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/396 (52%), Positives = 276/396 (69%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ + +PV  G V+ S   A  A + +  PL VVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKALLKGFGMPVPDGRVVRSPDEALLAARAMGAPLVVVKAQIHAGGRGAGHFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P   KGGVR+  + +        +L  TL+T+QTG  G  V  +Y+E G DI RELYL
Sbjct: 61  HDPG-GKGGVRLARTPEDAEQAAIAMLDQTLVTRQTGSAGRVVRRLYIEAGCDIGRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G +  +AS  GGM IE+VA   P++I K  IDP  G++     +L   L+L 
Sbjct: 120 SLLVDRGTGRIVIVASQDGGMAIEDVAAATPERILKEPIDPATGLSDYQARTLAARLDLH 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++      +    Y AF   D +++EINPL++ ++G L  LD+K+SFDDNAL+RH +++
Sbjct: 180 GRSIRAFTTVLRAAYDAFVALDAAIVEINPLVVTRSGDLLALDAKMSFDDNALFRHPELE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED RE EA +H L+Y+ LDG IGCMVNGAGLAMATMDIIK+ G  PANFLDVG
Sbjct: 240 ELRDENEEDPREREAARHGLAYVGLDGTIGCMVNGAGLAMATMDIIKMEGEEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAF+I+ SD  V+GIL+NIFGGIMRCD++   I++A +E  +++PLV+RL 
Sbjct: 300 GGATRERVAAAFRILLSDRKVRGILVNIFGGIMRCDIIADAIVAASRETGLHVPLVVRLA 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G+++++ SGL +I A DL DAA KIV AV+
Sbjct: 360 GTNVEQGHQILSASGLRIIPADDLADAATKIVAAVR 395


>gi|229162772|ref|ZP_04290729.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           R309803]
 gi|228620654|gb|EEK77523.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           R309803]
          Length = 386

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 274/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLEEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|323489567|ref|ZP_08094794.1| succinyl-CoA synthetase subunit beta [Planococcus donghaensis
           MPA1U2]
 gi|323396698|gb|EGA89517.1| succinyl-CoA synthetase subunit beta [Planococcus donghaensis
           MPA1U2]
          Length = 386

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLR+Y V V+ G V  S   A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRQYGVAVSYGTVAFSPEEAVKAAKELSTDVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  +  + +E+G+DI +E Y+
Sbjct: 58  -------GGVKIAKNLDEVRTYAKELLGKVLVTHQTGPEGKEIKRLLIEEGSDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  + S +GG+DIEEV+++ P+KIFK +IDP+IG+T      +   + + 
Sbjct: 111 GLVLDRQTARVTLMGSEEGGVDIEEVSENTPEKIFKEVIDPVIGLTGFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY  F +KD S++EINPL+   +G +  LD+K  FD+NALYRH DI 
Sbjct: 171 PKLVNKAAKFMLGLYTVFIEKDASIVEINPLVETGDGNILALDAKFDFDENALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG PANFLDVG
Sbjct: 231 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTINYYGGTPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ +G++ A KEV + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDIIAEGVIQAAKEVSLEVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +L+ ESGLN++ A  + D A++IV  V
Sbjct: 351 GTNVELGKKLLNESGLNIVAAGTMADGAKQIVELV 385


>gi|218234588|ref|YP_002368637.1| succinyl-CoA synthetase subunit beta [Bacillus cereus B4264]
 gi|228902339|ref|ZP_04066496.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 4222]
 gi|228909661|ref|ZP_04073484.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 200]
 gi|228922590|ref|ZP_04085890.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228954112|ref|ZP_04116141.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228960052|ref|ZP_04121716.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228966781|ref|ZP_04127825.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|229071334|ref|ZP_04204557.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           F65185]
 gi|229081091|ref|ZP_04213601.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock4-2]
 gi|229111307|ref|ZP_04240860.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-15]
 gi|229129112|ref|ZP_04258085.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-Cer4]
 gi|229146407|ref|ZP_04274778.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST24]
 gi|229152035|ref|ZP_04280230.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1550]
 gi|229180112|ref|ZP_04307456.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           172560W]
 gi|229192005|ref|ZP_04318975.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 10876]
 gi|296504331|ref|YP_003666031.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           BMB171]
 gi|226734923|sp|B7HDV9|SUCC_BACC4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218162545|gb|ACK62537.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           B4264]
 gi|228591556|gb|EEK49405.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 10876]
 gi|228603321|gb|EEK60798.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           172560W]
 gi|228631384|gb|EEK88018.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1550]
 gi|228637040|gb|EEK93499.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST24]
 gi|228654349|gb|EEL10214.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-Cer4]
 gi|228672083|gb|EEL27374.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-15]
 gi|228702135|gb|EEL54611.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock4-2]
 gi|228711788|gb|EEL63740.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           F65185]
 gi|228792880|gb|EEM40438.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228799568|gb|EEM46521.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228805678|gb|EEM52268.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228837019|gb|EEM82360.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228849950|gb|EEM94781.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 200]
 gi|228857308|gb|EEN01811.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 4222]
 gi|296325383|gb|ADH08311.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           BMB171]
          Length = 386

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/399 (52%), Positives = 272/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|218898989|ref|YP_002447400.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           G9842]
 gi|226734922|sp|B7IUJ5|SUCC_BACC2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218541995|gb|ACK94389.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           G9842]
          Length = 386

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/399 (52%), Positives = 272/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNIHIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|254456078|ref|ZP_05069507.1| succinyl-CoA synthetase beta chain [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083080|gb|EDZ60506.1| succinyl-CoA synthetase beta chain [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 386

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/396 (51%), Positives = 277/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY   V +GV   +V       K+L    YV+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGAVVPEGVFSLTVEDLVEKAKSLNTKKYVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +++ +    +E++G  L+T QTGP G  V  +YVE+ ++I +E YL
Sbjct: 58  -------GGVKILDTIEDLSEAAKEMMGKILVTHQTGPEGREVKRLYVEESSNIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  +AFI+S QGGMDIEEVA + P+KI    +D    ++ +D   +  +  L 
Sbjct: 111 SCLVDRASSKIAFISSDQGGMDIEEVASNLPEKIITTKVDIGNEISDKDCEEIIKIFNLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+I    L  ++Y+ F   D +++E+NPLI+ K  ++  LD+K++FD NAL+RH +I 
Sbjct: 171 DSAKIQAISLIKSIYQMFISTDANMVEVNPLILTKEEKVICLDAKVNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  EIEA +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLNEEDPTEIEASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGKEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AA KII SD +VKGILINIFGGIMRCDVL +G++ A KE+ I++PLV+RL 
Sbjct: 291 GGASKEKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  SGL +I+A +LDDAA+KIV A+K
Sbjct: 351 GTNFKEGKEILDNSGLKLISAENLDDAAKKIVEAIK 386


>gi|73662830|ref|YP_301611.1| succinyl-CoA synthetase subunit beta [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|82582273|sp|Q49X32|SUCC_STAS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|72495345|dbj|BAE18666.1| succinyl-CoA synthetase beta subunit [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 388

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+ R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAIFRSMGVAVPEGRVAYTAEEAVEKAKELDSKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLAPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+    G +  LD+K++FDDNAL++H DIQ
Sbjct: 171 KESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CD++ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDENVKGIFVNIFGGIMKCDIIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILKESGLAIEPAATMAEGAQKIVKLVK 386


>gi|197119591|ref|YP_002140018.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
 gi|197088951|gb|ACH40222.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
          Length = 389

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/396 (55%), Positives = 277/396 (69%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQAKA+LRK+ VPV  G V  +   A E A +   GP +VVK+QIHAGGRGKG  
Sbjct: 1   MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHAGGRGKGGG 59

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +L        R  S ++ +    R++LG TL T QTGP G  V+ V VE G +I  ELY
Sbjct: 60  VKL-------ARTSSEVQMIA---RDMLGMTLRTHQTGPEGKVVHRVLVECGCNIGSELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T      +   L L
Sbjct: 110 VSLLVDRATSRVTVMASTEGGMDIEEVAAKTPEKIFTEAVDPLVGLTPFQCRKIAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       +F +LY  F   D SLLEINPL++   G L  LD+K  FDDNAL+RHL I
Sbjct: 170 RGKLTGKAVKVFTSLYNTFIATDCSLLEINPLVVTAEGELIALDAKFGFDDNALFRHLQI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED+ EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 GDMRDFDEEDANEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A ++V I +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV++G RL+AESGLN++ A  + D AQKIV AV
Sbjct: 350 EGTNVELGKRLLAESGLNIVAADGMADGAQKIVRAV 385


>gi|311068130|ref|YP_003973053.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus 1942]
 gi|310868647|gb|ADP32122.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus 1942]
          Length = 385

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/399 (51%), Positives = 275/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVERAEGLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +   E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP +G+       +   +   
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKVVIDPAVGLQGYQARKIAFSINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LYKAF +KD S+ EINPL++  +G++  LD+K++FD NALYR 
Sbjct: 171 KELVGQA----AKFMLGLYKAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANF
Sbjct: 227 KDIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 347 VRLEGTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|253699670|ref|YP_003020859.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
 gi|251774520|gb|ACT17101.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
          Length = 389

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/396 (54%), Positives = 271/396 (68%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQAKA+LRK+ VPV  G V  +   A E A +   GP +VVK+QIHA        
Sbjct: 1   MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHA-------- 51

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  +   V    R++LG TL T QTGP G  V+ V VE G +I  ELY
Sbjct: 52  --GGRGKGGGVKLARTANEVQMIARDMLGMTLRTHQTGPEGKVVHRVLVECGCNIGSELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T      +   L L
Sbjct: 110 VSLLVDRATSRVTVMASTEGGMDIEEVAAKTPEKIFTEAVDPLVGLTPFQCRKIAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       +F +LY  F   D SLLEINPL++   G L  LD+K  FDDNAL+RHL I
Sbjct: 170 RGKLTGKAVKVFTSLYNTFIATDCSLLEINPLVVTAEGELIALDAKFGFDDNALFRHLQI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED+ EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 GDMRDFDEEDAHEIEASQHDLSYISLSGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A ++V I +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV++G RL+AESGLN++ A  + D AQKIV AV
Sbjct: 350 EGTNVEVGKRLLAESGLNIVAADGMADGAQKIVRAV 385


>gi|308068642|ref|YP_003870247.1| succinyl-CoA synthetase subunit beta (SCS-beta) [Paenibacillus
           polymyxa E681]
 gi|305857921|gb|ADM69709.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Paenibacillus
           polymyxa E681]
          Length = 386

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/396 (51%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A +A ++L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPNGKVAYTVEEAVAAAESLGSAITVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   L  V +   EILG  L+T QTGP G  V  + VE+G DI +E Y+
Sbjct: 58  -------GGVKVAKGLDEVRTFASEILGKVLVTHQTGPEGKEVKRLLVEEGCDIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRATGRIVMMASEEGGTEIEEVAAATPEKIFKAVVDPAIGLQVYQARKLAYDINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF DKD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVNKAVKFMLALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  V+GI +NIFGGIM+CD++  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVEGIFVNIFGGIMQCDIIAYGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKQILAESGLNIVAADSMADGAQKIVELVQ 386


>gi|317129221|ref|YP_004095503.1| succinyl-CoA synthetase subunit beta [Bacillus cellulosilyticus DSM
           2522]
 gi|315474169|gb|ADU30772.1| succinyl-CoA synthetase, beta subunit [Bacillus cellulosilyticus
           DSM 2522]
          Length = 387

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/397 (52%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR Y V V  G V  SV  A  A K+L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRSYGVAVPNGKVAFSVDEAVEAAKSLGTEVNVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG TL+T QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIKSEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  +  +AS +GG +IEEVA++ P+KIFK +IDP++G+       L   + + 
Sbjct: 111 GLVVDRATDRIVMMASEEGGTEIEEVAEETPEKIFKEVIDPVVGLMPYQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +       LY+ F DKD S+ EINPL+   +G++  LD+K++FD NALYR   I 
Sbjct: 171 KDLVREAVKFMLGLYQVFADKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQKAIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYNGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G+++A KEV + IPLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDENVKGIYVNIFGGIMKCDVIAEGVVAATKEVGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G +++ ESGL++  A  + D A+KIV  VKG
Sbjct: 351 GTNVDLGKKILEESGLDITAADSMADGAEKIVSLVKG 387


>gi|228928884|ref|ZP_04091916.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228830691|gb|EEM76296.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 386

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|229098305|ref|ZP_04229252.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-29]
 gi|229104398|ref|ZP_04235067.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-28]
 gi|229117322|ref|ZP_04246700.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-3]
 gi|228666222|gb|EEL21686.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-3]
 gi|228679096|gb|EEL33304.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-28]
 gi|228685203|gb|EEL39134.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-29]
          Length = 386

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/399 (52%), Positives = 274/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+L+ Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLKSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEVEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|30263839|ref|NP_846216.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. Ames]
 gi|47529264|ref|YP_020613.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49186686|ref|YP_029938.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Sterne]
 gi|65321163|ref|ZP_00394122.1| COG0045: Succinyl-CoA synthetase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|165873311|ref|ZP_02217916.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0488]
 gi|167642033|ref|ZP_02400263.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0193]
 gi|170689662|ref|ZP_02880842.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0465]
 gi|170709362|ref|ZP_02899776.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0389]
 gi|177655998|ref|ZP_02937125.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0174]
 gi|227813256|ref|YP_002813265.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|229604390|ref|YP_002868073.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0248]
 gi|254683457|ref|ZP_05147317.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721978|ref|ZP_05183767.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           A1055]
 gi|254735874|ref|ZP_05193580.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Western North America USA6153]
 gi|254739601|ref|ZP_05197295.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Kruger B]
 gi|254751205|ref|ZP_05203244.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Vollum]
 gi|81583679|sp|Q81WK0|SUCC_BACAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778428|sp|C3P5N7|SUCC_BACAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778429|sp|C3L791|SUCC_BACAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|30258483|gb|AAP27702.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. Ames]
 gi|47504412|gb|AAT33088.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49180613|gb|AAT55989.1| succinyl-CoA synthase, beta subunit [Bacillus anthracis str.
           Sterne]
 gi|164710949|gb|EDR16521.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0488]
 gi|167510013|gb|EDR85429.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0193]
 gi|170125736|gb|EDS94649.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0389]
 gi|170666386|gb|EDT17169.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0465]
 gi|172079897|gb|EDT65005.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0174]
 gi|227004887|gb|ACP14630.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|229268798|gb|ACQ50435.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0248]
          Length = 386

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMTDGAQKIVSLV 385


>gi|254759312|ref|ZP_05211337.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Australia 94]
          Length = 386

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVLNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMTDGAQKIVSLV 385


>gi|149924786|ref|ZP_01913129.1| Succinyl-CoA synthetase [Plesiocystis pacifica SIR-1]
 gi|149814343|gb|EDM73942.1| Succinyl-CoA synthetase [Plesiocystis pacifica SIR-1]
          Length = 398

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/400 (51%), Positives = 270/400 (67%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           M IHEYQAK LLR   VPV +  V  +   A +A + L       + VVKSQIHAGGRGK
Sbjct: 1   MKIHEYQAKGLLRAAGVPVPQSQVAFTADEARAAAQKLIAETGIEVVVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           GRFKE P    GGV+V     +      ++LGSTL+T QTG  G +V  V +E G DI  
Sbjct: 61  GRFKEHP--DLGGVKVVKGADAAAEIAEKMLGSTLVTIQTGEEGKKVGRVLIEQGMDIAS 118

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYL+  +DR +G V  +AS++GGMDIEEVA+ +P+KI K  +DP  G+   D  ++   
Sbjct: 119 ELYLAATLDRDTGRVMIMASSEGGMDIEEVAESHPEKILKSSVDPAFGMQGFDARAVAYG 178

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+           +  A+ D D S+LEINPL++   G +  LD+K+ FDDNALYRH
Sbjct: 179 LGLEGKTARKMASFLGKIVTAYNDLDCSMLEINPLVVTGGGDVMALDAKVQFDDNALYRH 238

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++ LRD +EED  E+EA +  LSY+ALDG IGCMVNGAGLAMATMDIIK +G  PANF
Sbjct: 239 KDVEALRDETEEDPAELEAGKWGLSYVALDGTIGCMVNGAGLAMATMDIIKYFGSEPANF 298

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +++V AAFKII  D ++KGIL+NIFGGIM+CD +  G++ AVK++ + +PLV
Sbjct: 299 LDVGGGATEERVTAAFKIICKDPNLKGILVNIFGGIMKCDTIANGVVGAVKQIGLEVPLV 358

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NV++G  ++A SGL + +A  L DAAQKIV   K
Sbjct: 359 VRLEGTNVELGKEILANSGLKITSADSLRDAAQKIVEMTK 398


>gi|212639579|ref|YP_002316099.1| succinyl-CoA synthetase subunit beta [Anoxybacillus flavithermus
           WK1]
 gi|212561059|gb|ACJ34114.1| Succinyl-CoA synthetase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 401

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/395 (51%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 16  MNIHEYQGKEILRSYGVSVPNGRVAFTVEEAVEAAKELGSSVCVVKAQIHAGGRGKA--- 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 73  -------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 125

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     +   + + 
Sbjct: 126 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRMAFNINIP 185

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 186 KELVNQAVKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 245

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YI+LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 246 EYRDLDEEDPKEVEASKYDLNYISLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 305

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI+ A K+V +N+PLV+RLE
Sbjct: 306 GGATTEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 365

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN+  A  + D AQKIV  V
Sbjct: 366 GTNVELGKKILEESGLNITAAESMADGAQKIVSLV 400


>gi|42782928|ref|NP_980175.1| succinyl-CoA synthetase subunit beta [Bacillus cereus ATCC 10987]
 gi|47570337|ref|ZP_00240982.1| succinyl-CoA synthetase beta chain [Bacillus cereus G9241]
 gi|49478405|ref|YP_037897.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52141652|ref|YP_085177.1| succinyl-CoA synthetase subunit beta [Bacillus cereus E33L]
 gi|118479058|ref|YP_896209.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis str.
           Al Hakam]
 gi|217961256|ref|YP_002339824.1| succinyl-CoA synthetase subunit beta [Bacillus cereus AH187]
 gi|222097281|ref|YP_002531338.1| succinyl-CoA synthetase subunit beta [Bacillus cereus Q1]
 gi|225865817|ref|YP_002751195.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           03BB102]
 gi|228916473|ref|ZP_04080039.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228935150|ref|ZP_04097977.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228947555|ref|ZP_04109845.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228986979|ref|ZP_04147105.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229092878|ref|ZP_04224012.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-42]
 gi|229123350|ref|ZP_04252554.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           95/8201]
 gi|229140478|ref|ZP_04269033.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|229186076|ref|ZP_04313245.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BGSC 6E1]
 gi|229197946|ref|ZP_04324661.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1293]
 gi|301055326|ref|YP_003793537.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis CI]
 gi|81395103|sp|Q6HEX9|SUCC_BACHK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81409456|sp|Q732N4|SUCC_BACC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81686574|sp|Q636J0|SUCC_BACCZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046882|sp|A0RHK9|SUCC_BACAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734924|sp|B7HLG9|SUCC_BACC7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778430|sp|C1EP60|SUCC_BACC3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778431|sp|B9IVC5|SUCC_BACCQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|42738855|gb|AAS42783.1| succinyl-CoA synthase, beta subunit [Bacillus cereus ATCC 10987]
 gi|47553002|gb|EAL11408.1| succinyl-CoA synthetase beta chain [Bacillus cereus G9241]
 gi|49329961|gb|AAT60607.1| succinyl-CoA synthase, beta subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975121|gb|AAU16671.1| succinyl-CoA synthase, beta subunit [Bacillus cereus E33L]
 gi|118418283|gb|ABK86702.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bacillus
           thuringiensis str. Al Hakam]
 gi|217067520|gb|ACJ81770.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           AH187]
 gi|221241339|gb|ACM14049.1| succinyl-CoA synthase, beta subunit [Bacillus cereus Q1]
 gi|225785683|gb|ACO25900.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           03BB102]
 gi|228585525|gb|EEK43628.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1293]
 gi|228597252|gb|EEK54903.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BGSC 6E1]
 gi|228643039|gb|EEK99315.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|228660126|gb|EEL15762.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           95/8201]
 gi|228690500|gb|EEL44283.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-42]
 gi|228772757|gb|EEM21197.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228812075|gb|EEM58406.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228824515|gb|EEM70320.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228843052|gb|EEM88134.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|300377495|gb|ADK06399.1| succinyl-CoA synthetase subunit beta [Bacillus cereus biovar
           anthracis str. CI]
 gi|324327733|gb|ADY22993.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 386

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|228940924|ref|ZP_04103483.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228973853|ref|ZP_04134429.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980443|ref|ZP_04140753.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis Bt407]
 gi|228779263|gb|EEM27520.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis Bt407]
 gi|228785878|gb|EEM33881.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228818760|gb|EEM64826.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326941605|gb|AEA17501.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 386

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 272/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|163941574|ref|YP_001646458.1| succinyl-CoA synthetase subunit beta [Bacillus weihenstephanensis
           KBAB4]
 gi|229013019|ref|ZP_04170184.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           DSM 2048]
 gi|229061439|ref|ZP_04198784.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH603]
 gi|229134644|ref|ZP_04263453.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST196]
 gi|229168575|ref|ZP_04296298.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH621]
 gi|226734925|sp|A9VT74|SUCC_BACWK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|163863771|gb|ABY44830.1| succinyl-CoA synthetase, beta subunit [Bacillus weihenstephanensis
           KBAB4]
 gi|228614981|gb|EEK72083.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH621]
 gi|228648690|gb|EEL04716.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST196]
 gi|228717862|gb|EEL69510.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH603]
 gi|228748273|gb|EEL98133.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           DSM 2048]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY AF +KD S+ EINPL+   +G++  LD+K++FD NALYR+
Sbjct: 171 KELVGQAV----KFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRN 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|152976202|ref|YP_001375719.1| succinyl-CoA synthetase subunit beta [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189046883|sp|A7GRG6|SUCC_BACCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|152024954|gb|ABS22724.1| succinyl-CoA synthetase, beta subunit [Bacillus cytotoxicus NVH
           391-98]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 272/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAILRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILGSTL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAENILGSTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFHINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+ F +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRVFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED +EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|229157412|ref|ZP_04285490.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 4342]
 gi|228626139|gb|EEK82888.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 4342]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDRNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|229086389|ref|ZP_04218565.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-44]
 gi|228696905|gb|EEL49714.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-44]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+A+ +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 NELVGQAV----KFMMGLYRAYIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED +EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLEEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|182416040|ref|YP_001821106.1| succinyl-CoA synthetase, beta subunit [Opitutus terrae PB90-1]
 gi|226734967|sp|B1ZP17|SUCC_OPITP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|177843254|gb|ACB77506.1| succinyl-CoA synthetase, beta subunit [Opitutus terrae PB90-1]
          Length = 393

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/395 (51%), Positives = 271/395 (68%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKAL  K+ V V KG    +     +A+  LP  + VVKSQIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQLPEGMIVVKSQIHAGGRGKGTFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV+V  S         ++LG+TL+T QTGP G +V  +Y   G+ I +E YL
Sbjct: 61  D---GFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AST+GGM+IE+VA D P +IFK+ +DP  G+    V  L   L   
Sbjct: 118 AILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFT 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L   LY+ F + D S++E+NPLI   +G++  LD+K++FDDNAL+RH ++ 
Sbjct: 178 AAEGKNASKLIRALYRCFWENDASMVEVNPLITTPDGQVEALDAKVAFDDNALFRHPELV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +H L+YIALDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 238 ELRDLNEEDPKEIEASKHELNYIALDGNIACLVNGAGLAMSTMDIIKHFGGTPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII  D +V+GIL+NIFGGIM C+V+ +GI+ AVKEV + +PLV+RLE
Sbjct: 298 GGASREQVVAAFKIILGDKNVRGILVNIFGGIMDCNVIAQGIVDAVKEVGLELPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +++   + DAAQKIV  V
Sbjct: 358 GNNVAAGKATLATSGLKLVSGDSMADAAQKIVKLV 392


>gi|294500951|ref|YP_003564651.1| succinate-CoA ligase subunit beta [Bacillus megaterium QM B1551]
 gi|295706297|ref|YP_003599372.1| succinate-CoA ligase subunit beta [Bacillus megaterium DSM 319]
 gi|294350888|gb|ADE71217.1| succinate-CoA ligase, beta subunit [Bacillus megaterium QM B1551]
 gi|294803956|gb|ADF41022.1| succinate-CoA ligase, beta subunit [Bacillus megaterium DSM 319]
          Length = 386

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/396 (52%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRKY V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKYGVAVPNGRVAFTVEEAVEAAKELGSQVSVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +  ++ILG TL+T QTGP G  V  + VE+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAQDILGKTLVTHQTGPEGKEVKRLLVEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  + S +GG +IEEVA+  P+KIFK  +DP IG+ +     L   + + 
Sbjct: 111 GLVLDRATSQVVLMGSEEGGTEIEEVAEKTPEKIFKEYVDPAIGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY  F +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAVKFMTGLYTVFVEKDCSIAEINPLVVTGDGDVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A K+V +++PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIATGVVEATKQVGLSLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++ +SGLN+  A  + D AQKIV  VK
Sbjct: 351 GTNVELGKEILQKSGLNITAAESMADGAQKIVSLVK 386


>gi|30021924|ref|NP_833555.1| succinyl-CoA synthetase subunit beta [Bacillus cereus ATCC 14579]
 gi|81433851|sp|Q819X0|SUCC_BACCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29897480|gb|AAP10756.1| Succinyl-CoA synthetase beta chain [Bacillus cereus ATCC 14579]
          Length = 386

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 271/399 (67%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + V K+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVEKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|229031466|ref|ZP_04187466.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1271]
 gi|228729755|gb|EEL80735.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1271]
          Length = 386

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEQTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYR+
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRN 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|319649579|ref|ZP_08003735.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 2_A_57_CT2]
 gi|317398741|gb|EFV79423.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 2_A_57_CT2]
          Length = 386

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/395 (51%), Positives = 273/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRQYGVAVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYASEILGKTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP++G+T+     +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAEQTPEKIFKEEIDPVLGLTAFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+A+ +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 SKLVGQAVKFMMGLYRAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDGNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 ALRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVVEAAKQVGLTVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++AES +++I A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILAESDIDIIAAESMADGAQKIVSLV 385


>gi|310641533|ref|YP_003946291.1| succinyl-CoA ligase [ADP-forming] subunit beta [Paenibacillus
           polymyxa SC2]
 gi|309246483|gb|ADO56050.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Paenibacillus
           polymyxa SC2]
          Length = 386

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/396 (51%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A +A ++L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPNGKVAYTVEEAVAAAESLGSAVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   L  V +   EILG  L+T QTG  G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKGLDEVRTIASEILGKVLVTHQTGAEGKEVKRLLIEEGCDIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRATGRIVLMASEEGGTEIEEVAAATPEKIFKAVVDPAIGLQVHQARKLAYEINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF DKD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVNKAVKFMLALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  V+GI +NIFGGIM+CD++  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVEGIFVNIFGGIMQCDIIANGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKQILAESGLNIVAADSMADGAQKIVELVQ 386


>gi|78223276|ref|YP_385023.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
 gi|78194531|gb|ABB32298.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
          Length = 387

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/395 (53%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILRRFGVPVPDGHVCYNGASAREWAKRLGDGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    R +LG TL T QTGP G  V  V VE+G +I RELY+
Sbjct: 52  -GGRGKGGGVKLARTSQEVQLIARNMLGMTLRTHQTGPDGKLVTRVLVENGCNIDRELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR++  V  +AST+GGMDIEEVA   P+KIFK  IDPL+G++     +L   L L 
Sbjct: 111 SLLVDRSTSKVTVMASTEGGMDIEEVAATTPEKIFKEAIDPLVGLSPFQCRNLAFSLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L  NLY  F   D SLLEINPL++ K G L  LD+K  FDDNA++RHL I 
Sbjct: 171 GKLLPKAQKLLENLYATFIACDCSLLEINPLVVTKEGDLLALDAKFGFDDNAIFRHLQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  E+EA QH+LSY++L+GNIGC+VNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 DMRDYDEEDPNEVEASQHDLSYVSLNGNIGCLVNGAGLAMATMDIIKFSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A ++V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVIEAARQVSLQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV +G +L++ESGLN++ A  + D AQKIV AV
Sbjct: 351 GTNVALGKQLLSESGLNIVAADGMADGAQKIVQAV 385


>gi|228992564|ref|ZP_04152491.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           pseudomycoides DSM 12442]
 gi|228998612|ref|ZP_04158199.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock3-17]
 gi|229006112|ref|ZP_04163800.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock1-4]
 gi|228755188|gb|EEM04545.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock1-4]
 gi|228761080|gb|EEM10039.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock3-17]
 gi|228767198|gb|EEM15834.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           pseudomycoides DSM 12442]
          Length = 386

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/399 (52%), Positives = 272/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+A+ +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAYIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EED +EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLEEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|332976753|gb|EGK13584.1| succinyl-CoA ligase subunit beta [Desmospora sp. 8437]
          Length = 386

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/396 (51%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +L++Y V V +G V  +   A  A K L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNVHEYQGKEILKQYGVVVPRGHVAFTPDEAVDAAKQLGGDLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     E+LG TL+T QTGP G  V  + +E+G  I +E Y+
Sbjct: 58  -------GGVKLAKSLDEVKQYAEELLGKTLVTHQTGPEGKEVKRLLIEEGCKIEKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR++  V  +AS++GG +IEEVA + P+KI K+++DP +G+       L   + + 
Sbjct: 111 GVVIDRSTDRVTMMASSEGGTEIEEVAANTPEKIVKVVVDPAVGLQPFQARKLAFAIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+AF +KD SL EINPLI   +G++  LD+K++FD NALYRH ++ 
Sbjct: 171 KNLVNKAVKFMMGLYQAFVEKDGSLAEINPLITTTDGQVMALDAKLNFDSNALYRHPEVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +EIEA + +L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDFSEEDPKEIEASKFDLTYIALDGNIGCMVNGAGLAMATMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D  V+GIL+NIFGGIM+CDV+ +G++ A K++ ++ PLV+RLE
Sbjct: 291 GGATTEKVTAAFKIILEDPQVQGILVNIFGGIMKCDVIAEGVVEAAKQIGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGL +  A  + DAA+KIV  VK
Sbjct: 351 GTNVDLGKKILNESGLKITAADSMADAAEKIVSLVK 386


>gi|229174502|ref|ZP_04302034.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           MM3]
 gi|228609062|gb|EEK66352.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           MM3]
          Length = 386

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/399 (52%), Positives = 273/399 (68%), Gaps = 18/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+L+ Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLKSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEQTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYR+
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRN 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 347 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|71082944|ref|YP_265663.1| succinyl-CoA synthetase subunit beta (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|123647321|sp|Q4FP29|SUCC_PELUB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71062057|gb|AAZ21060.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 386

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY   V +GV   +V       K+L    +V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGAVVPEGVFAFTVDELIEKAKSLKTEKFVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +++  +    +E+LG TL+T QTGP G  V  +YVE+ ++I +E YL
Sbjct: 58  -------GGVKILNTIDELSVAAKELLGKTLVTHQTGPAGREVKRLYVEESSNIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  + FI+S QGGMDIEEVA+  P+KI    ID    ++  D   +  +  L 
Sbjct: 111 SCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+     L  ++YK F   D +++E+NPLI+ K  ++  LD+K++FD NAL+RH +I 
Sbjct: 171 DDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  EI+A +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLNEEDPTEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AA KII SD +VKGILINIFGGIMRCDVL +G++ A KE+ I++PLV+RL 
Sbjct: 291 GGASKEKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  SGL +I+A +LDDAAQKIV A+K
Sbjct: 351 GTNFKEGKEILDNSGLKLISAENLDDAAQKIVEAIK 386


>gi|224476371|ref|YP_002633977.1| succinyl-CoA synthetase subunit beta [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|254778452|sp|B9DPG0|SUCC_STACT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|222420978|emb|CAL27792.1| putative succinyl-CoA synthetase, beta chain [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 388

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/398 (50%), Positives = 269/398 (67%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   VPV +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVPVPEGRVAFTAEEAVEKAKELDTDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+GADI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVEAYANELLGKQLVTHQTGPEGKEVKRLYIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKSPEKIFKETIDPVVGLAPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL++   G +  LD+KI+FDDNAL+RH DI 
Sbjct: 171 KESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDAKINFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMRCDIIAEGIVAAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV++G +++ +SGL +  A  + + AQKIV  VK V
Sbjct: 351 GTNVELGKQILKDSGLAIEPAATMAEGAQKIVKLVKEV 388


>gi|229918615|ref|YP_002887261.1| succinyl-CoA synthetase subunit beta [Exiguobacterium sp. AT1b]
 gi|259511782|sp|C4L610|SUCC_EXISA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229470044|gb|ACQ71816.1| succinyl-CoA synthetase, beta subunit [Exiguobacterium sp. AT1b]
          Length = 386

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR++ V V  G    +V  A +A   L G + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKELLREFGVAVPTGYPAFTVEEAVAAAAKLDGEVKVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V     EILG TL+T QTGP G  V  +Y+E+G+ I +E YL
Sbjct: 58  -------GGVKLAKTDEEVKQYASEILGKTLVTHQTGPEGKVVQRLYIEEGSAIDQEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+ G +  + S++GGMDIEEVA+  P+KI K ++DP++G+       L   +E+ 
Sbjct: 111 GLVLDRSIGRIVIMGSSEGGMDIEEVAEHTPEKIHKEIVDPVVGLRPFQARRLAFKMEVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +  D+   LYK + + D ++ EINPL+  K+G +  LD+K++FD NALYRH DI 
Sbjct: 171 TKLVNEFSDMVMKLYKVYVETDCTIAEINPLVTTKDGNVIALDAKLNFDSNALYRHSDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED RE+EA +H+LSYIALDGNIGC+VNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ALRDTTEEDPREVEASKHDLSYIALDGNIGCLVNGAGLAMATMDIIKHYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK+I SD  VKGI +NIFGGIM+CD++ +GI++A KE+ +++PLV+RLE
Sbjct: 291 GGATKEKVTEAFKLILSDDQVKGIFVNIFGGIMKCDIIAEGIVAATKEIGLDLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G R++ ESGL + TA  + D A+KI   V+
Sbjct: 351 GTNVDAGKRILDESGLAITTANSMADGAEKIAALVR 386


>gi|157803807|ref|YP_001492356.1| succinyl-CoA synthetase subunit beta [Rickettsia canadensis str.
           McKiel]
 gi|189081785|sp|A8EYY8|SUCC_RICCK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157785070|gb|ABV73571.1| succinyl-CoA synthetase subunit beta [Rickettsia canadensis str.
           McKiel]
          Length = 386

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 197/395 (49%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY +P + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGIPTSTGLVVTKTEQINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +V  +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKIAHDMFGINLVTHQTGPQGQKVKRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST GG+DIEEVAK  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTAGGVDIEEVAKKTPEKIVKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FD+NAL++H ++ 
Sbjct: 171 DNQVKQMKEIVKSVYNAFIETDATQIEINPLIVKTDGDLLALDAKITFDENALFKHPNVT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 AMRDYDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +++  AFKII SD  V+G+L+NIFGGIMRCD++ +GI++A KE+ I +PLV+RL 
Sbjct: 291 GGADCERIKEAFKIILSDKKVQGVLVNIFGGIMRCDIISEGIIAAAKEIDIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G ++++ SGL +ITA DL DAA KIV A+
Sbjct: 351 GTNVEKGKKILSNSGLEIITAHDLADAANKIVEAI 385


>gi|284097280|ref|ZP_06385420.1| Succinyl-CoA synthetase beta chain [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283831204|gb|EFC35174.1| Succinyl-CoA synthetase beta chain [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 395

 Score =  401 bits (1031), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/395 (51%), Positives = 271/395 (68%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK L  ++ VPV +G  I +  AAE     L  P+YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEFQAKQLFAQFGVPVPRGKEIKTPRAAEKWAAALDTPVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    + V +  RE++G TL+T QTGP G +V  + +E+GA I +ELYL
Sbjct: 58  -------GGVKITKQREEVPALTRELIGKTLVTHQTGPKGRKVRRLLIEEGAGIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
           SLLVDR SG   F+AST+GGM+IEEVA+  P+K+F+  +DP +G       ++A    + 
Sbjct: 111 SLLVDRDSGCPTFLASTEGGMEIEEVAEKTPEKLFRETVDPAVGYHPYNGRNLAFALGLP 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+         +  NLY+ F +K+ SL+EINPL+I  + +L  LD K++FDDNALY+H 
Sbjct: 171 SLEKAVVTPFIQMLGNLYRLFMEKNASLVEINPLVITTDKQLVALDGKVTFDDNALYKHQ 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+Q  RD+ EE+  EIEA  +NL+Y+ LDG+IGCMVNGAGLAMATMD+IKL G  PANFL
Sbjct: 231 DVQAFRDLHEEEPLEIEAGANNLNYVKLDGDIGCMVNGAGLAMATMDVIKLAGAEPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA ++ VAA F+I+  D  VKGI INIFGGI+RC+ +  G++ A KEV I +P+V+
Sbjct: 291 DVGGGATKETVAAGFRILLKDRKVKGIFINIFGGIVRCERIANGVIEASKEVGITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL+G N + G +++ ESGL V  A DL +AAQKIV
Sbjct: 351 RLQGTNAEEGRKILLESGLKVDVATDLWEAAQKIV 385


>gi|330813453|ref|YP_004357692.1| succinyl-CoA ligase [ADP-forming] beta chain [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486548|gb|AEA80953.1| succinyl-CoA ligase [ADP-forming] beta chain [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 386

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+K+   V  G  I S+   +   K +     V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKDILKKFGAEVPNGEPIFSLDEIDEKFKKIKTDKVVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L+ +  + + +LG  L+T QTGP G  V  +Y+E+ +DI +E YL
Sbjct: 58  -------GGVKIVDNLEQLKEEAKNLLGKVLVTHQTGPQGREVKRLYIEEASDISKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  +AFI+S +GGMDIEEVA   P+KI    +    G+T ED+  +    +L 
Sbjct: 111 SCLVDRASSKIAFISSAEGGMDIEEVANKTPEKITTTRVSLSKGLTKEDITQVLKPYQLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++      L  +++KA  + D +L+E+NPLI+ K  ++  LD+KI+FD NALYRH DI 
Sbjct: 171 SESIEQAEKLIQSIFKALLNTDANLIEVNPLILTKENQVLCLDAKINFDANALYRHPDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED  EIEA +++L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDFDEEDPAEIEASKYDLAYIKLDGEIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AAF II SD +VKGILINIFGGIMRCDV+ +G+++A KE  +++PLV+RL 
Sbjct: 291 GGATKEKVSAAFNIILSDKNVKGILINIFGGIMRCDVIAEGVIAAAKETNLSVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G   + G +++ +SGL +I A DL +AAQKIV A+K
Sbjct: 351 GTKFEEGKKILEQSGLKIIPANDLSEAAQKIVEAIK 386


>gi|308173571|ref|YP_003920276.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
           DSM 7]
 gi|307606435|emb|CBI42806.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
           DSM 7]
 gi|328553496|gb|AEB23988.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
           TA208]
 gi|328911712|gb|AEB63308.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
           LL3]
          Length = 385

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/395 (50%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    ++L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAESLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTTDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILNESGLNITSAESMADGAQKIVSLV 385


>gi|70726669|ref|YP_253583.1| succinyl-CoA synthetase subunit beta [Staphylococcus haemolyticus
           JCSC1435]
 gi|77417491|sp|Q4L5U8|SUCC_STAHJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|68447393|dbj|BAE04977.1| succinyl-CoA synthetase (beta subunit) [Staphylococcus haemolyticus
           JCSC1435]
          Length = 388

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDTEIYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+    G +  LD+KI+FDDNAL+RH DIQ
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKINFDDNALFRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNESGLAIEPAATMAEGAQKIVKLVK 386


>gi|154686025|ref|YP_001421186.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
           FZB42]
 gi|189046881|sp|A7Z4M9|SUCC_BACA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|154351876|gb|ABS73955.1| SucC [Bacillus amyloliquefaciens FZB42]
          Length = 385

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/395 (50%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    ++L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAESLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTKDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILNESGLNITSAESMADGAQKIVSLV 385


>gi|58698202|ref|ZP_00373123.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630876|ref|YP_002727667.1| Succinyl-CoA synthetase, beta subunit [Wolbachia sp. wRi]
 gi|254778456|sp|C0R4N4|SUCC_WOLWR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58535283|gb|EAL59361.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592857|gb|ACN95876.1| Succinyl-CoA synthetase, beta subunit [Wolbachia sp. wRi]
          Length = 383

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 270/396 (68%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NV V KG V +S    ++ +  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEVLHKFNVSVPKGFVATSAEEVKTQVSQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +     +++++G TL+T QTGP+G +V  VYVE+G+ I +E YL
Sbjct: 58  -------GGVKLAKSAEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++D       FI S++GGMDIEEVAK+ P KI K  ID     TS D + L     L 
Sbjct: 111 SLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDID---SATSFDSSKLSSSFHLS 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  N+Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 168 PEQIEKITNVAKNIYDAFIATDASQIEINPLVETSSGDFIALDAKINFDDNALYRHPEIM 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ LSYI +DG+IGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 228 ELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 288 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +L DAAQKIV  VK
Sbjct: 348 GTNFEEGKKILEESGLNIIAADELGDAAQKIVKEVK 383


>gi|172057900|ref|YP_001814360.1| succinyl-CoA synthetase subunit beta [Exiguobacterium sibiricum
           255-15]
 gi|226734953|sp|B1YIL7|SUCC_EXIS2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|171990421|gb|ACB61343.1| succinyl-CoA synthetase, beta subunit [Exiguobacterium sibiricum
           255-15]
          Length = 386

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LLR Y VPV  G+   +V  A  A + L GP+ VVK+QIHAGGRGK    
Sbjct: 1   MNVHEYQAKELLRSYGVPVPNGIAAFTVEEAVDAAEQLSGPIKVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V     E+LG TL+T QTGP G  +  + VE+G  I +E YL
Sbjct: 58  -------GGVKLAKSQEEVKEFATELLGKTLVTHQTGPEGKVIQRLLVEEGCAIDKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +G V  + S++GGMDIEEVA+  P+KI K ++DP +G+ +     L   + + 
Sbjct: 111 GIVLDRVTGRVVIMGSSEGGMDIEEVAEATPEKIIKEVVDPAVGLQAFQARKLAFAMGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY  F DKD S+ EINPL+  K+G +  LD+K++FD NALYRH D+ 
Sbjct: 171 VKLVNKFVGMVTKLYTFFVDKDCSIAEINPLVTTKDGDVLALDAKLNFDSNALYRHADVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED RE+EA +++L+YIALDGNIGC+VNGAGLAMATMDIIK + G PANFLDVG
Sbjct: 231 ALRDETEEDPREVEASKNDLNYIALDGNIGCLVNGAGLAMATMDIIKHFSGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK+I SD +VKGI +NIFGGIM+CDV+ +GI++A KEV + +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKLILSDENVKGIFVNIFGGIMKCDVIAEGIVAATKEVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +++ +SGL +  A  + D A+KI   VK
Sbjct: 351 GTNVDAGKQILKDSGLAITAATSMADGAEKIAALVK 386


>gi|297584024|ref|YP_003699804.1| succinyl-CoA synthetase subunit beta [Bacillus selenitireducens
           MLS10]
 gi|297142481|gb|ADH99238.1| succinyl-CoA synthetase, beta subunit [Bacillus selenitireducens
           MLS10]
          Length = 387

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/396 (52%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRKY V V  G V  SV  A  A + L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKYGVAVPNGKVAYSVDEAVKAAEELGTDISVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG  L+T QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYADEILGKVLVTHQTGPEGKEVKRLLIEEGCDIQNEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +  +  +AS +GG +IEEVA + P+KIFK +IDP+ G+       L   + + 
Sbjct: 111 GIVVDRATSRITMMASEEGGTEIEEVAAETPEKIFKEIIDPVTGLMPYQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +       LYK F +KD S+ EINPL+   +G +  LD+K++FD NAL+R  DI 
Sbjct: 171 KEMLKEAVKFMMGLYKVFEEKDCSIAEINPLVTTGDGSVMALDAKLNFDSNALFRQKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 EFRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++  G+++A KEV + IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIYVNIFGGIMKCDIIADGVVAATKEVGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+  A  + D AQKIV  VK
Sbjct: 351 GTNVELGKKILKESGLNITAADSMADGAQKIVSLVK 386


>gi|229541104|ref|ZP_04430164.1| succinyl-CoA synthetase, beta subunit [Bacillus coagulans 36D1]
 gi|229325524|gb|EEN91199.1| succinyl-CoA synthetase, beta subunit [Bacillus coagulans 36D1]
          Length = 386

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/395 (50%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +V  A  A K+L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGKVAFTVDEAVEAAKSLGTQVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +  +E+LG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAQELLGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAAKTPEKIFKETIDPAVGLLPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL++  +G++  LD+K++FD N L+R  D+ 
Sbjct: 171 AKLVNQAVKFMTGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNGLFRQQDVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED +EIEA +++LSY+ALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 AYRDLEEEDPKEIEASKYDLSYVALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKGI +NIFGGIM+CDV+  G+++A K+V ++IPLV+RLE
Sbjct: 291 GGATEEKVTEAFKIILSDEKVKGIFVNIFGGIMKCDVIASGVVAATKQVGLDIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGL ++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLKIVAAESMADGAQKIVELV 385


>gi|194014747|ref|ZP_03053364.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Bacillus pumilus ATCC 7061]
 gi|194013773|gb|EDW23338.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Bacillus pumilus ATCC 7061]
          Length = 386

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/400 (51%), Positives = 278/400 (69%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +   A  A + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEELESSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDM- 176
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP IG+    + +VA   ++ 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIP 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            +L GQA         +LY AF +KD S+ EINPL++  +G++  LD+K++FD NALYR 
Sbjct: 171 TKLVGQAV----KFMTSLYNAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANF
Sbjct: 227 KDILEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NV++G +++++SGLN+ +A  + D A+KIV  VK
Sbjct: 347 VRLEGTNVELGKKILSDSGLNITSAESMADGAEKIVSLVK 386


>gi|332288475|ref|YP_004419327.1| succinyl-CoA synthetase subunit beta [Gallibacterium anatis UMN179]
 gi|330431371|gb|AEC16430.1| succinyl-CoA synthetase subunit beta [Gallibacterium anatis UMN179]
          Length = 388

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y +PV++G+   +V     A+KTL G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQIFAEYKLPVSRGIACQTVEEGLQAMKTLGGKEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +     + LG  L+T QT   G  VN +YVE+ +D+ +ELY+
Sbjct: 58  -------GGVKLVQTEEQLTEFFNKWLGKRLVTFQTDANGQPVNTIYVEEASDLEKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR+S  V F+AST+GG++IEEVA   P  + K+ +D LIG        L   L L 
Sbjct: 111 GMVIDRSSQSVVFMASTEGGVNIEEVAAKTPHLLHKVYVDALIGGMPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F +KD SLLEINPL+I+KNG+L  LD+K+  D NALYRH D+ 
Sbjct: 171 PEQTKQFTQMFCQLTKLFIEKDASLLEINPLVILKNGKLHCLDAKVVIDGNALYRHPDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+S+ED RE EA++  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMRDLSQEDPREAEAEESQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++  GI+ AVKEV IN+P+V+RLE
Sbjct: 291 GGATKERVATAFKIILSDKNVKAVLVNIFGGIVRCDLIANGIIDAVKEVGINVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A SGL +  A  L +AAQ +V A +
Sbjct: 351 GNNAELGREILANSGLKITAANSLTEAAQLVVKAAE 386


>gi|157692288|ref|YP_001486750.1| succinyl-CoA synthetase subunit beta [Bacillus pumilus SAFR-032]
 gi|189046884|sp|A8FD73|SUCC_BACP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157681046|gb|ABV62190.1| succinate--CoA ligase (ADP-forming) beta subunit [Bacillus pumilus
           SAFR-032]
          Length = 386

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/400 (51%), Positives = 278/400 (69%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +   A  A + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEELESSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDM- 176
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP IG+    + +VA   ++ 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIP 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            +L GQA         +LY AF +KD S+ EINPL++  +G++  LD+K++FD NALYR 
Sbjct: 171 TKLVGQAV----KFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANF
Sbjct: 227 KDILEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NV++G +++++SGLN+ +A  + D A+KIV  VK
Sbjct: 347 VRLEGTNVELGKKILSDSGLNITSAESMADGAEKIVSLVK 386


>gi|91762632|ref|ZP_01264597.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91718434|gb|EAS85084.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 386

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY   V +GV   +V       K+L    +V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGAVVPEGVFAFTVDELIEKAKSLKTEKFVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +++  +    +E+LG TL+T QTGP G  V  +YVE+ ++I +E YL
Sbjct: 58  -------GGVKILNTIDELSVAAKELLGKTLVTHQTGPAGREVKRLYVEESSNIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  + FI+S QGGMDIEEVA+  P+KI    ID    ++  D   +  +  L 
Sbjct: 111 SCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+     L  ++YK F   D +++E+NPLI+ K  ++  LD+K++FD NAL+RH +I 
Sbjct: 171 DDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  EI+A +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLNEEDPAEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AA KII SD +VKGILINIFGGIMRCDVL +G++ A KE+ I++PLV+RL 
Sbjct: 291 GGASKEKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  SGL +I+A +LDDAA+KIV A+K
Sbjct: 351 GTNFKEGKEILDNSGLKLISAENLDDAAKKIVKAIK 386


>gi|253573508|ref|ZP_04850851.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847036|gb|EES75041.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 386

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/395 (53%), Positives = 274/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPEGRVAFTVEEAVEAAKALGTPVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +  +E+LG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYAQELLGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK +IDP +G+TS     L   + + 
Sbjct: 111 GVVVDRGTGRVTMMASEEGGTEIEEVAAATPEKIFKEVIDPAVGLTSFQARRLAYSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF DKD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVGKATQFMMALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ALRDLEEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD+ VKGI +NIFGGIM+CDV+  GI+ A K+V ++ PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDAKVKGIFVNIFGGIMKCDVIASGIVEAAKQVGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++AESGL +++A  + D AQKIV  V
Sbjct: 351 GTNVDLGKQILAESGLAIVSADSMADGAQKIVSLV 385


>gi|297537990|ref|YP_003673759.1| succinyl-CoA synthetase subunit beta [Methylotenera sp. 301]
 gi|297257337|gb|ADI29182.1| succinyl-CoA synthetase, beta subunit [Methylotenera sp. 301]
          Length = 387

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+KY +PV +G V++      +A   +    +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKTLLQKYGIPVPRGQVVTVAKDTAAATTEIASDAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     + + E+LG TL+T Q  P G  VN V +E+   I RELYL
Sbjct: 58  -------GGVKLVKSTTEAQAVVSELLGKTLVTYQNAPDGQLVNQVLIEETLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT   V  IAS+ GGMDIEE+A+  P+KI + + DPL GV      +L   L+L 
Sbjct: 111 SMLVDRTLERVVIIASSAGGMDIEEIAQTSPEKILEEVCDPLNGVVDFQARNLAFKLDLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LY+ F + D++LLEINPL++   G+L  LD K+S DDNALYR   + 
Sbjct: 171 GEQISAFTKILKGLYRLFKENDLALLEINPLVVTAEGKLFALDCKMSIDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+EDS+E  A    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 EQRDWSQEDSKEAVAHHAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGTPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AFKII +D++VK IL+NIFGGIMRCD++ +GI++AVK+V + IP+++RLE
Sbjct: 291 GGATAETVTKAFKIILADNNVKAILVNIFGGIMRCDIIAEGIITAVKDVGMQIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++  SGLN+I+A  L DAA + V AV
Sbjct: 351 GTNVDLGKQMLQTSGLNIISANGLTDAAVQAVKAV 385


>gi|322420765|ref|YP_004199988.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M18]
 gi|320127152|gb|ADW14712.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M18]
          Length = 389

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/392 (54%), Positives = 267/392 (68%), Gaps = 12/392 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQAKA+LRK+ VPV  G V  +   A E A +   GP +VVK+QIHA        
Sbjct: 1   MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHA-------- 51

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  S   V    R++LG TL T QTGP G  V+ V VE+G +I  ELY
Sbjct: 52  --GGRGKGGGVKLARSSSEVQMIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIANELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T      +   L L
Sbjct: 110 VSLLVDRGTSRVTIMASTEGGMDIEEVAARTPEKIFTEAVDPLVGLTPFQCRKIAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       +  NLY  F   D SLLEINPL++   G L  LD+K  FDDNAL+RHL I
Sbjct: 170 RGKLTNKAVKVLSNLYTTFIACDCSLLEINPLVVTAEGDLLALDAKFGFDDNALFRHLQI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED  E+EA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 GDMRDFDEEDPNEVEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A ++V I +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           EG NV++G RL+AESGLN++ A  + D AQKI
Sbjct: 350 EGTNVELGKRLLAESGLNIVAADGMADGAQKI 381


>gi|153873562|ref|ZP_02002104.1| succinyl-CoA synthetase beta subunit [Beggiatoa sp. PS]
 gi|152069971|gb|EDN67895.1| succinyl-CoA synthetase beta subunit [Beggiatoa sp. PS]
          Length = 387

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/397 (50%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +   Y +PV  G V    + A+   K L G  +++K+Q+HAGGRGK    
Sbjct: 1   MNIHEYQAKQIFANYGIPVPTGYVAFKSNEAQQNAKRLGGDAWMIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   SL+ V      +LG+ L T QTG TG  ++CV VE+   I  ELYL
Sbjct: 58  -------GGVKKAQSLEQVKEITEGLLGTQLKTHQTGATGQPIHCVLVENTTAINSELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  IAS  GGMDIEEVA + P+KI ++ IDPL+G+ +     +   L L+
Sbjct: 111 SLVVDRASARIKVIASRAGGMDIEEVAANSPEKIIQITIDPLVGIGTYQCGEIAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR     +  NLY+ F DKD+SL+EINPLII   G L  LD+KI+ DDNALYRH D+ 
Sbjct: 171 ALARKQLTAILFNLYRLFIDKDLSLVEINPLIINDQGELMALDAKINIDDNALYRHTDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D S+ED +E +A+Q +L+Y+ALDG+I CMVNGAGLAMATMD+I++ GG PANFLDVG
Sbjct: 231 KLYDASQEDEKEHKARQFDLNYVALDGDIACMVNGAGLAMATMDVIQIQGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   +KV  A KII SDS VK IL+NIFGGI+RCD++ +G++ A+ E    +P+V+RLE
Sbjct: 291 GGTTAEKVTEAVKIILSDSKVKAILVNIFGGIVRCDLIAEGVIHAISETGTQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  L+ +SG ++ +A +LD+AA+K+V A KG
Sbjct: 351 GTNVEKGKALLKDSGFSITSADNLDEAAKKVVSAAKG 387


>gi|78223465|ref|YP_385212.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
 gi|78194720|gb|ABB32487.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
          Length = 386

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/395 (52%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR + VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILRNFGVPVPDGHVCYNGASAREWAKRLGDGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    R++LG TL T QTGP G  V  V VE+G +I RELY+
Sbjct: 52  -GGRGKGGGVKLARTNQEVQQIARDMLGMTLRTHQTGPEGKVVTRVLVENGCNIDRELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF+  IDPL+G+T     +L   L L 
Sbjct: 111 SLLVDRATSRVTVMASTEGGMDIEEVAAKTPEKIFREAIDPLVGLTPFQSRNLAFSLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +L   LY  F   D SLLEINPL++ K G L  LD+K  FDDNA+++H  I 
Sbjct: 171 GKLTPKAVNLLEGLYTTFLACDCSLLEINPLVVTKEGDLLALDAKFGFDDNAVFKHPGIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD +EED  E+EA QH+LSY++L+GNIGC+VNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 DFRDYNEEDPNEVEASQHDLSYVSLNGNIGCLVNGAGLAMATMDIIKFSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A ++V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVIEAARQVSLQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG +++AESGLN++ A  + D AQKIV AV
Sbjct: 351 GTNVEIGKKMLAESGLNIVAADGMADGAQKIVQAV 385


>gi|317402900|gb|EFV83442.1| succinyl-CoA ligase subunit beta [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/396 (51%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ +PV +G+   SV  A +A + L GP++VVK+QIHAGG       
Sbjct: 1   MKIHEYQGKELLKQFGIPVPRGIPALSVDEAVAAAEKLGGPVWVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  L+T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 54  ---RGKGGGVKLARSLDDVRKLASEILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+++E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIVTEYIDPLTGLSAEQATKIANAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFQKLYKCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATRVVAAVK 386


>gi|289550964|ref|YP_003471868.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           lugdunensis HKU09-01]
 gi|289180496|gb|ADC87741.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           lugdunensis HKU09-01]
          Length = 388

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAKEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+K+FK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAATTPEKVFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH DIQ
Sbjct: 171 KESINKAAKFLISLYNVFVEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|253731864|ref|ZP_04866029.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724274|gb|EES93003.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 388

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+I  +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVITADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|220933987|ref|YP_002512886.1| succinyl-CoA synthetase, beta subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|254778453|sp|B8GN38|SUCC_THISH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219995297|gb|ACL71899.1| succinyl-CoA synthetase, beta subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 386

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/396 (52%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAKAL R++ +PV +GV +S   A   AI +L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKALFREHGIPVPEGVAVSDPAALGEAISSLGGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+    + +   + E+LG  L T QTGP G  +N V VE   DI RELYL
Sbjct: 58  -------GGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    VA +AS  GGMDIE VA + P+KI  L +DP  G        +   L L+
Sbjct: 111 SLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F D D SL+EINPL++ K G L  LD+KI+ DDN LYRH  + 
Sbjct: 171 GPQVSALVKLLGQLYRLFVDSDASLVEINPLVVTKTGELIALDAKINLDDNGLYRHQALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ED+RE  A++H L+Y+ LDGNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 ELRDETQEDAREARAREHELNYVRLDGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG    +VA AFK+I SD +VK + +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGTTAARVAEAFKLILSDEAVKAVFVNIFGGIVRCDLIAEGIINAVKEVHVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +++AESGLN+ITA  L D A+++V +V+
Sbjct: 351 GTNVDQGKQMLAESGLNIITAESLTDGARRVVASVQ 386


>gi|311105071|ref|YP_003977924.1| succinyl-CoA synthetase beta chain [Achromobacter xylosoxidans A8]
 gi|310759760|gb|ADP15209.1| succinyl-CoA synthetase beta chain [Achromobacter xylosoxidans A8]
          Length = 386

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/396 (51%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ VPV +G+   SV  A +A + L GP++VVK+QIHAGG       
Sbjct: 1   MKIHEYQGKELLKQFGVPVPRGIPALSVDEAVAAAEKLGGPVWVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  LIT QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 54  ---RGKGGGVKLARSLDDVRKLASEILGMQLITHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+++E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLSAEQATKIANAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFQKLYKCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++A+SGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLADSGLPIISADTMAEAATRVVAAVK 386


>gi|253701392|ref|YP_003022581.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
 gi|251776242|gb|ACT18823.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
          Length = 392

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/396 (55%), Positives = 278/396 (70%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MNIHEYQAKA+LRK+ VPV  G V  +   A E A +   GP +VVK+QIHAGGRGKG  
Sbjct: 1   MNIHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHAGGRGKGGG 59

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +L A S G V++ +         R++LG TL T QTGP G  V+ V VE+G +I RELY
Sbjct: 60  VKL-AKSAGEVQLIA---------RDMLGMTLRTHQTGPEGKVVHRVLVENGCNIARELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SL+VDR S  VA +AST+GGMDIEEVA   P+KIF   IDPL+G+T      +   L L
Sbjct: 110 VSLVVDRNSSKVAVMASTEGGMDIEEVAAKTPEKIFTETIDPLVGLTQFQGRKIAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       +   LY  F   D ++LE+NPL++   G L  LD+K  FDDNAL+RHL I
Sbjct: 170 EGKQVGKAVKMLEALYTTFIACDCAMLEVNPLVVTAEGELLALDAKFGFDDNALFRHLQI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED  EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 GDMRDFDEEDPNEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +V+GIL+NIFGGIM+CDV+  G++ A ++V + +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDKNVEGILVNIFGGIMKCDVIATGVIQAARQVALKVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV+ G  L+A+SGL+++ A  + DAAQKIV AV
Sbjct: 350 EGTNVEKGKELLAQSGLDIVAADGMADAAQKIVMAV 385


>gi|298694538|gb|ADI97760.1| succinyl-CoA synthetase beta chain [Staphylococcus aureus subsp.
           aureus ED133]
          Length = 388

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCTIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|82750848|ref|YP_416589.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus RF122]
 gi|123549070|sp|Q2YXM1|SUCC_STAAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|82656379|emb|CAI80798.1| succinyl-CoA synthetase beta chain [Staphylococcus aureus RF122]
          Length = 388

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K     +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKEFNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G + VLD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLVLDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|197117851|ref|YP_002138278.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
 gi|197087211|gb|ACH38482.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
          Length = 392

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/396 (53%), Positives = 270/396 (68%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MNIHEYQAKA+LRK+ VPV  G V  +   A E A +   GP +VVK+QIHA        
Sbjct: 1   MNIHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHA-------- 51

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  S   V    R++LG TL T QTGP G  V+ V VE+G +I RELY
Sbjct: 52  --GGRGKGGGVKLAKSASEVQLIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIARELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SL+VDR S  VA +AST+GGMDIEEVA   P+KIF   IDPL+G+T      +   L L
Sbjct: 110 VSLVVDRNSSKVAVMASTEGGMDIEEVAAKTPEKIFTETIDPLVGLTQFQGRKIAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       +   LY  F   D ++LE+NPL++   G L  LD+K  FDDNAL+RHL I
Sbjct: 170 EGKQVGKAVKMLEALYTTFIACDCAMLEVNPLVVTAEGELLALDAKFGFDDNALFRHLQI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED  EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 GDMRDFDEEDPNEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +V+GIL+NIFGGIM+CDV+  G++ A ++V + +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDRNVEGILVNIFGGIMKCDVIATGVIQAARQVALKVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV+ G  L+A+SGL+++ A  + DAAQKIV AV
Sbjct: 350 EGTNVEKGKELLAQSGLDIVAADGMADAAQKIVMAV 385


>gi|49483408|ref|YP_040632.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|295427732|ref|ZP_06820364.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|77417488|sp|Q6GHJ0|SUCC_STAAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49241537|emb|CAG40223.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|295128090|gb|EFG57724.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 388

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKITKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|15924235|ref|NP_371769.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926828|ref|NP_374361.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus N315]
 gi|21282857|ref|NP_645945.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49486084|ref|YP_043305.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57651814|ref|YP_186120.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus COL]
 gi|87160758|ref|YP_493835.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194953|ref|YP_499753.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267736|ref|YP_001246679.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393794|ref|YP_001316469.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221367|ref|YP_001332189.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156979566|ref|YP_001441825.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161509411|ref|YP_001575070.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142035|ref|ZP_03566528.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315603|ref|ZP_04838816.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253733517|ref|ZP_04867682.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006032|ref|ZP_05144633.2| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257425299|ref|ZP_05601724.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257427959|ref|ZP_05604357.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257430592|ref|ZP_05606974.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433353|ref|ZP_05609711.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436195|ref|ZP_05612242.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus M876]
 gi|257795699|ref|ZP_05644678.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9781]
 gi|258415923|ref|ZP_05682193.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9763]
 gi|258421685|ref|ZP_05684609.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9719]
 gi|258423914|ref|ZP_05686799.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9635]
 gi|258434841|ref|ZP_05688915.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9299]
 gi|258444583|ref|ZP_05692912.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A8115]
 gi|258447584|ref|ZP_05695728.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6300]
 gi|258449426|ref|ZP_05697529.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6224]
 gi|258452544|ref|ZP_05700550.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5948]
 gi|258454805|ref|ZP_05702769.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5937]
 gi|262048143|ref|ZP_06021030.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus D30]
 gi|269202861|ref|YP_003282130.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282892733|ref|ZP_06300968.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A8117]
 gi|282903800|ref|ZP_06311688.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282905563|ref|ZP_06313418.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282910817|ref|ZP_06318620.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914022|ref|ZP_06321809.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282916495|ref|ZP_06324257.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus D139]
 gi|282918944|ref|ZP_06326679.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C427]
 gi|282920029|ref|ZP_06327758.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A9765]
 gi|282924067|ref|ZP_06331743.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C101]
 gi|282927587|ref|ZP_06335203.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A10102]
 gi|283770308|ref|ZP_06343200.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|283957988|ref|ZP_06375439.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284024238|ref|ZP_06378636.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501053|ref|ZP_06666904.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293510015|ref|ZP_06668723.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus M809]
 gi|293526602|ref|ZP_06671287.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294848240|ref|ZP_06788987.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A9754]
 gi|295406180|ref|ZP_06815987.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8819]
 gi|296274802|ref|ZP_06857309.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297208109|ref|ZP_06924540.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297244408|ref|ZP_06928291.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8796]
 gi|297591310|ref|ZP_06949948.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300912190|ref|ZP_07129633.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|304381191|ref|ZP_07363844.1| succinyl-CoA synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039645|sp|P66872|SUCC_STAAW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54039647|sp|P99071|SUCC_STAAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54042233|sp|P66871|SUCC_STAAM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417487|sp|Q5HGI7|SUCC_STAAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417489|sp|Q6G9W8|SUCC_STAAS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122539701|sp|Q2FZ37|SUCC_STAA8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123486207|sp|Q2FHJ3|SUCC_STAA3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030216|sp|A7X1L8|SUCC_STAA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030217|sp|A6U164|SUCC_STAA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030218|sp|A5ISD0|SUCC_STAA9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030219|sp|A6QGE5|SUCC_STAAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030220|sp|A8Z3S5|SUCC_STAAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|13701045|dbj|BAB42340.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247015|dbj|BAB57407.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204296|dbj|BAB94993.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244527|emb|CAG42956.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286000|gb|AAW38094.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus COL]
 gi|87126732|gb|ABD21246.1| succinyl-CoA synthetase, beta subunit [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87202511|gb|ABD30321.1| succinyl-CoA synthetase, beta subunit, putative [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|147740805|gb|ABQ49103.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149946246|gb|ABR52182.1| succinyl-CoA synthetase, beta subunit [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374167|dbj|BAF67427.1| succinyl-CoA synthetase, beta subunit [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156721701|dbj|BAF78118.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368220|gb|ABX29191.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253728571|gb|EES97300.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257271756|gb|EEV03894.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274800|gb|EEV06287.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278720|gb|EEV09339.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281446|gb|EEV11583.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284477|gb|EEV14597.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus M876]
 gi|257789671|gb|EEV28011.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9781]
 gi|257839259|gb|EEV63733.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9763]
 gi|257842371|gb|EEV66796.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9719]
 gi|257845943|gb|EEV69972.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9635]
 gi|257849202|gb|EEV73184.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9299]
 gi|257850076|gb|EEV74029.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A8115]
 gi|257853775|gb|EEV76734.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6300]
 gi|257857414|gb|EEV80312.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6224]
 gi|257859762|gb|EEV82604.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5948]
 gi|257863188|gb|EEV85952.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5937]
 gi|259163709|gb|EEW48264.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus D30]
 gi|262075151|gb|ACY11124.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269940737|emb|CBI49118.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282314039|gb|EFB44431.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C101]
 gi|282316754|gb|EFB47128.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C427]
 gi|282319935|gb|EFB50283.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus D139]
 gi|282322090|gb|EFB52414.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325422|gb|EFB55731.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282330855|gb|EFB60369.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282590590|gb|EFB95667.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A10102]
 gi|282594745|gb|EFB99729.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A9765]
 gi|282595418|gb|EFC00382.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282764730|gb|EFC04855.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A8117]
 gi|283460455|gb|EFC07545.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|283470458|emb|CAQ49669.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus aureus subsp. aureus ST398]
 gi|283790137|gb|EFC28954.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285816927|gb|ADC37414.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus aureus
           04-02981]
 gi|290920674|gb|EFD97737.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291096058|gb|EFE26319.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291466959|gb|EFF09477.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus M809]
 gi|294825040|gb|EFG41462.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A9754]
 gi|294968768|gb|EFG44790.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8819]
 gi|296887352|gb|EFH26254.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297178438|gb|EFH37684.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8796]
 gi|297576196|gb|EFH94912.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300886436|gb|EFK81638.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|302332851|gb|ADL23044.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|302751068|gb|ADL65245.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304340174|gb|EFM06115.1| succinyl-CoA synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312438377|gb|ADQ77448.1| succinyl-CoA synthase beta subunit [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312829639|emb|CBX34481.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315131039|gb|EFT87023.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315194134|gb|EFU24527.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198485|gb|EFU28814.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140939|gb|EFW32786.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144346|gb|EFW36112.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323441023|gb|EGA98730.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus O11]
 gi|323443891|gb|EGB01502.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus O46]
 gi|329313914|gb|AEB88327.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus T0131]
 gi|329727155|gb|EGG63611.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329733634|gb|EGG69962.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 388

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|313200691|ref|YP_004039349.1| succinyl-CoA synthetase subunit beta [Methylovorus sp. MP688]
 gi|312440007|gb|ADQ84113.1| succinyl-CoA synthetase, beta subunit [Methylovorus sp. MP688]
          Length = 392

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/395 (52%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+LL++Y +P+ +  V  +  +A  A K++ G  +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKSLLQRYGLPIPQSQVAENPQSAVEAAKSIGGDAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V +    +LG  L+T Q  P G  V  V VE    I RELYL
Sbjct: 58  -------GGVKVVKSYQDVEAVAASLLGKPLVTYQNAPDGQPVLQVLVEQTLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+   V  +AS  GGMDIEE+A   P+KI + + DPL G+      +L   L L 
Sbjct: 111 SLLVDRSLERVVMVASAAGGMDIEEIAATQPEKILQEVCDPLNGLVDFQARNLAFGLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F + D++LLEINPL++   G L  LD K+S DDNALYR   + 
Sbjct: 171 GEQIAAFVRLAKGLYKLFKENDLALLEINPLVVTAEGALVALDCKMSVDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S++D++E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GGAPANFLDVG
Sbjct: 231 EQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    VA AFKII +DS+VK IL+NIFGGIMRCD++ +GI++AVKEV I IP+V+RLE
Sbjct: 291 GGATAATVARAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIQIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G ++++ESGL++I+A  L DAAQ+ V AV
Sbjct: 351 GTNVELGRKMLSESGLSIISAAGLTDAAQQAVRAV 385


>gi|27467841|ref|NP_764478.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           ATCC 12228]
 gi|57866713|ref|YP_188395.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           RP62A]
 gi|242242529|ref|ZP_04796974.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           W23144]
 gi|251810678|ref|ZP_04825151.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876321|ref|ZP_06285188.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           SK135]
 gi|38258562|sp|Q8CPH5|SUCC_STAES RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417490|sp|Q5HPU5|SUCC_STAEQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|27315386|gb|AAO04520.1|AE016747_17 succinyl-CoA synthetase beta chain [Staphylococcus epidermidis ATCC
           12228]
 gi|57637371|gb|AAW54159.1| succinyl-CoA synthase, beta subunit [Staphylococcus epidermidis
           RP62A]
 gi|242233956|gb|EES36268.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           W23144]
 gi|251805838|gb|EES58495.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295346|gb|EFA87873.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           SK135]
 gi|319401463|gb|EFV89673.1| succinyl-CoA synthetase beta chain [Staphylococcus epidermidis
           FRI909]
 gi|329724314|gb|EGG60826.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU144]
 gi|329736189|gb|EGG72461.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU028]
          Length = 388

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKAILNESGLAIEPAATMAEGAQKIVKLVK 386


>gi|254796635|ref|YP_003081471.1| succinyl-CoA synthetase beta chain [Neorickettsia risticii str.
           Illinois]
 gi|254589873|gb|ACT69235.1| succinyl-CoA synthetase beta chain [Neorickettsia risticii str.
           Illinois]
          Length = 392

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/395 (51%), Positives = 267/395 (67%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           MNIHEYQAK +L+ Y VP   G ++          K+L    G ++ VK+QIHAGGRGK 
Sbjct: 1   MNIHEYQAKEILQVYGVPTPAGFLVQENTETSEIAKSLARLGGEVFAVKAQIHAGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S++  I + +++LG  L+T QT P G +V  VY+E G  IL+E
Sbjct: 61  ----------GGVVICRSVEEAIDNTKKMLGMNLVTHQTSPAGQKVRKVYIEAGQSILKE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            YLS++VDR S  VA IAS +GGM+IEEVA+  P+KI K+ +DP IG++      +   L
Sbjct: 111 YYLSMVVDRESAKVAIIASEEGGMEIEEVARLKPEKIKKVFVDPSIGISDFHTRKIGFEL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L          L   LY  F  +D S +EINPLI    G    LD+KI+FDDNALYRH 
Sbjct: 171 GLSLAQIKQFTPLVKKLYALFVTRDASQVEINPLIANSRGEFIALDAKINFDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D  ELRD+ EED +EIEA ++NL+YI ++G+IGCMVNGAGLAMATMDIIK YG +PANFL
Sbjct: 231 DTLELRDLYEEDPKEIEASKYNLNYIKMEGDIGCMVNGAGLAMATMDIIKYYGASPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+ ++V  AFKII+SD  V GIL+NIFGGIMRCD++ KGI++A K++ + +PLV+
Sbjct: 291 DVGGGANLEQVTNAFKIISSDKHVTGILVNIFGGIMRCDIIAKGIVAAAKDIGLTMPLVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G ++I +SGLN++TA +L DAAQKIV
Sbjct: 351 RLSGTNYSAGMKIIEDSGLNIVTASELGDAAQKIV 385


>gi|315658465|ref|ZP_07911337.1| succinyl-CoA ligase subunit beta [Staphylococcus lugdunensis
           M23590]
 gi|315496794|gb|EFU85117.1| succinyl-CoA ligase subunit beta [Staphylococcus lugdunensis
           M23590]
          Length = 388

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAKEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIERGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPGKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH DIQ
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVKRGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|293604311|ref|ZP_06686718.1| succinyl-CoA ligase subunit beta [Achromobacter piechaudii ATCC
           43553]
 gi|292817188|gb|EFF76262.1| succinyl-CoA ligase subunit beta [Achromobacter piechaudii ATCC
           43553]
          Length = 386

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 276/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ +PV +G+   SV  A +A + L GP++VVK+QIHAGG       
Sbjct: 1   MKIHEYQGKELLKQFGIPVPRGIPALSVDEAVAAAEKLGGPVWVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+ V     EILG  LIT QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 54  ---RGKGGGVKLARSLEDVRKLASEILGMQLITHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+++E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLSAEQATKIANAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LY+ + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFQKLYQCYMETDASLVEINPLNRDSKGNIIALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ ++ SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLANKSVKAILVNIFGGIMRCDVIAEGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++A+SGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLADSGLPIISADTMAEAATRVVAAVK 386


>gi|293366789|ref|ZP_06613465.1| succinyl-CoA synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319090|gb|EFE59460.1| succinyl-CoA synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736634|gb|EGG72900.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU045]
          Length = 388

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL++H DI 
Sbjct: 171 KESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFKHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKAILNESGLAIEPAATMAEGAQKIVKLVK 386


>gi|330685654|gb|EGG97295.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU121]
          Length = 388

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDEHVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|319764917|ref|YP_004128854.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans
           BC]
 gi|330827121|ref|YP_004390424.1| succinyl-CoA synthetase subunit beta [Alicycliphilus denitrificans
           K601]
 gi|317119478|gb|ADV01967.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans
           BC]
 gi|329312493|gb|AEB86908.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans
           K601]
          Length = 386

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/400 (50%), Positives = 267/400 (66%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIR----EILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                   G      +   I D++    +ILG  L+T QTGP G +V  +Y+EDGADI  
Sbjct: 52  -----GGRGKGGGVKVAKTIDDVKTLASQILGMQLVTHQTGPEGQKVRRLYIEDGADIKN 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELY+SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T+E    +   
Sbjct: 107 ELYVSLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITAEQSRKVAAA 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L G +     DLF  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH
Sbjct: 167 IGLTGASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLIALDAKFNFDANALFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI  LRD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANF
Sbjct: 227 PDIVALRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V + +PLV
Sbjct: 287 LDVGGGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLQVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +R++G N ++G +++AESGL +I+A  + +AA KIV AV+
Sbjct: 347 VRMKGTNEELGKKMLAESGLPIISADTMAEAATKIVEAVR 386


>gi|163856372|ref|YP_001630670.1| succinyl-CoA synthetase subunit beta [Bordetella petrii DSM 12804]
 gi|226734926|sp|A9IKE3|SUCC_BORPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|163260100|emb|CAP42401.1| Succinyl-CoA synthetase, beta chain [Bordetella petrii]
          Length = 386

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ VPV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVPVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  L+T QTGP G +VN +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDDVRKLASEILGMQLVTHQTGPEGQKVNRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI    IDPL G+ +E    + + + L 
Sbjct: 111 SLVTDRATQKVAIIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLQAEQAKKVAESIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     D+F  LY  + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 GGSADQAADVFQKLYTCYMDTDASLVEINPLNCDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKGVKAILVNIFGGIMRCDVIAEGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++A+SGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLADSGLPIISADTMAEAATRVVAAVK 386


>gi|242373538|ref|ZP_04819112.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           M23864:W1]
 gi|242348901|gb|EES40503.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           M23864:W1]
          Length = 388

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA + P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAANTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESIGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|121596331|ref|YP_988227.1| succinyl-CoA synthetase subunit beta [Acidovorax sp. JS42]
 gi|222112555|ref|YP_002554819.1| succinyl-CoA synthetase subunit beta [Acidovorax ebreus TPSY]
 gi|189046871|sp|A1WD26|SUCC_ACISJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778438|sp|B9MHW0|SUCC_DIAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120608411|gb|ABM44151.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidovorax sp.
           JS42]
 gi|221731999|gb|ACM34819.1| succinyl-CoA synthetase, beta subunit [Acidovorax ebreus TPSY]
          Length = 386

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/396 (51%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V +   EILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKTIDDVKARASEILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T E    +   + L 
Sbjct: 111 SLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITPEQSKKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     DLF  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA KIV AV+
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKIVEAVR 386


>gi|239636275|ref|ZP_04677277.1| succinyl-CoA synthetase beta chain [Staphylococcus warneri L37603]
 gi|239597630|gb|EEQ80125.1| succinyl-CoA synthetase beta chain [Staphylococcus warneri L37603]
          Length = 388

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDEHVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPASTMAEGAQKIVKLVK 386


>gi|256822756|ref|YP_003146719.1| succinyl-CoA synthetase subunit beta [Kangiella koreensis DSM
           16069]
 gi|256796295|gb|ACV26951.1| succinyl-CoA synthetase, beta subunit [Kangiella koreensis DSM
           16069]
          Length = 388

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G  + +  +A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFNEYGLPVSEGYAVDNPQSAFEAAGRIGGNVWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    ++ LG  L+T QT   G  V+ + VE+  DI +ELYL
Sbjct: 58  -------GGVKLVKTKEEVKDFAKQWLGKNLVTYQTDANGQPVSKILVEECTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPEKILKATIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++LLEINPL+I ++G L  LD+KI+ D NA+YRH  + 
Sbjct: 171 GKQVKQFTHIFLQLAKMFVEKDLALLEINPLVIKEDGDLHCLDAKINIDGNAMYRHPKLS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKFELNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV +  P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIAEGIIGAVKEVGVKAPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGLN+I A  L DAA K+V A +
Sbjct: 351 GNNAELGRKVLAESGLNIIAAESLTDAATKVVAAAE 386


>gi|253998617|ref|YP_003050680.1| succinyl-CoA synthetase subunit beta [Methylovorus sp. SIP3-4]
 gi|253985296|gb|ACT50153.1| succinyl-CoA synthetase, beta subunit [Methylovorus sp. SIP3-4]
          Length = 392

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 208/395 (52%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+LL++Y +P+ +  V  +  +A  A K++ G  +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKSLLQRYGLPIPQSQVAENPQSAVEAAKSIGGDAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V +    +LG  L+T Q  P G  V  V VE    I RELYL
Sbjct: 58  -------GGVKVVKSYEDVEAVAASLLGKPLVTYQNAPDGQPVLQVLVEQTLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+   V  +AS  GGMDIE++A   P+KI + + DPL G+      +L   L L 
Sbjct: 111 SLLVDRSLERVVMVASAAGGMDIEDIAATQPEKILQEVCDPLNGLVDFQARNLAFGLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F + D++LLEINPL++   G L  LD K+S DDNALYR   + 
Sbjct: 171 GEQIAAFVRLAKGLYKLFKENDLALLEINPLVVTAEGALVALDCKMSVDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S++D++E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GGAPANFLDVG
Sbjct: 231 EQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    VA AFKII +DS+VK IL+NIFGGIMRCD++ +GI++AVKEV I IP+V+RLE
Sbjct: 291 GGATAATVARAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIQIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G ++++ESGL++I+A  L DAAQ+ V AV
Sbjct: 351 GTNVELGRKMLSESGLSIISAAGLTDAAQQAVRAV 385


>gi|241764840|ref|ZP_04762845.1| succinyl-CoA synthetase, beta subunit [Acidovorax delafieldii 2AN]
 gi|241365635|gb|EER60359.1| succinyl-CoA synthetase, beta subunit [Acidovorax delafieldii 2AN]
          Length = 386

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/400 (50%), Positives = 267/400 (66%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIR----EILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                   G      +   I D++    +ILG  L T QTGP G +V  +Y+EDGADI +
Sbjct: 52  -----GGRGKGGGVKVAKTIDDVKKLAGDILGMQLKTHQTGPEGQKVRRLYIEDGADIKK 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELY+SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+T++    +   
Sbjct: 107 ELYVSLVTDRATQKVAFIASSEGGMDIEEVAHATPEKIITEYIDPLTGITADQSKKIAAA 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L G +     DLF  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH
Sbjct: 167 IGLSGASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDANALFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I  LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANF
Sbjct: 227 PEIVALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +N+PLV
Sbjct: 287 LDVGGGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLNVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +R++G N ++G +++AESGL +I A  + +AA KIV AVK
Sbjct: 347 VRMKGTNEELGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|157826590|ref|YP_001495654.1| succinyl-CoA synthetase subunit beta [Rickettsia bellii OSU 85-389]
 gi|189081784|sp|A8GUV0|SUCC_RICB8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157801894|gb|ABV78617.1| succinyl-CoA synthetase subunit beta [Rickettsia bellii OSU 85-389]
          Length = 385

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/395 (51%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + GVV++   +  +AI  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDKLNTKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+ +     +   L  +
Sbjct: 111 SVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++    YKAF + D + +EINPLI+ K G L  LD+K +FDDN L++H +I 
Sbjct: 171 DHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDAKFTFDDNGLFKHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED  E  A    LSY+ +DG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ALRDQDEEDPLETRAADAGLSYVKMDGSIGCMVNGAGLAMATMDIIKLYGATPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  +++ SGL +I A DL DAA KIV A+
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAASKIVEAI 385


>gi|91206043|ref|YP_538398.1| succinyl-CoA synthetase subunit beta [Rickettsia bellii RML369-C]
 gi|122425251|sp|Q1RH55|SUCC_RICBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91069587|gb|ABE05309.1| Succinyl-CoA synthetase beta chain [Rickettsia bellii RML369-C]
          Length = 385

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/395 (51%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + GVV++   +  +AI  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDELNTKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+ +     +   L  +
Sbjct: 111 SVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++    YKAF + D + +EINPLI+ K G L  LD+K +FDDN L++H +I 
Sbjct: 171 DHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDAKFTFDDNGLFKHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED  E  A    LSY+ +DG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ALRDQDEEDPLETRAADAGLSYVKMDGSIGCMVNGAGLAMATMDIIKLYGATPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  +++ SGL +I A DL DAA KIV A+
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAASKIVEAI 385


>gi|288553077|ref|YP_003425012.1| succinyl-CoA synthetase subunit beta [Bacillus pseudofirmus OF4]
 gi|288544237|gb|ADC48120.1| succinyl-CoA synthetase subunit beta [Bacillus pseudofirmus OF4]
          Length = 386

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/400 (54%), Positives = 272/400 (68%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRKY V V  G V  SV  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKYGVAVPNGKVAFSVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TLIT QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYADEILGKTLITHQTGPEGKEVKRLLIEEGCDIKNEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK +IDP +G+       L   +   
Sbjct: 111 GLVLDRATNRVVLMASEEGGTEIEEVAEATPEKIFKEVIDPAVGLQGFQARRLAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LYKAF +KD S+ EINPL+   +G++  LD+K++FD NALYR 
Sbjct: 171 KELVGQAV----KFMMGLYKAFSEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDVLEYRDLEEEDEKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYSGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ +G+++A KEV + IPLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDENVKGIFVNIFGGIMKCDIIAEGVVAATKEVGLEIPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NVD+G +++ ESGLN+  A  + D AQKIV  VK
Sbjct: 347 VRLEGTNVDLGKQILNESGLNITAADSMADGAQKIVSLVK 386


>gi|319892262|ref|YP_004149137.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161958|gb|ADV05501.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 388

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  S   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFSAEEAVEKAKELDTDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+GA+I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVEAYANELLGKVLVTHQTGPEGKEVKRLYIEEGANIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKNPEKIFKETIDPVIGLAPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL++   G +  LDSKI+FDDNAL+RH DI 
Sbjct: 171 KESINKAVKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDSKINFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMD I  + G PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFNGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIMRCD++ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDENVKGIFVNIFGGIMRCDIIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G +++ +SGL +  A  + + AQKIV  V
Sbjct: 351 GTNVKEGKQILKDSGLAIEPANTMAEGAQKIVKLV 385


>gi|314936592|ref|ZP_07843939.1| succinyl-CoA synthase, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655211|gb|EFS18956.1| succinyl-CoA synthase, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
          Length = 388

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESVNKAAKFLLSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++ ESGL +  A  + + AQ+IV  VK
Sbjct: 351 GTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVK 386


>gi|323464641|gb|ADX76794.1| succinyl-CoA synthetase, beta subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 388

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  S   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFSAEEAVEKAKELVTDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+GA+I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVEAYANELLGKVLVTHQTGPEGKEVKRLYIEEGANIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKNPEKIFKETIDPVIGLAPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL++   G +  LDSKI+FDDNAL+RH DI 
Sbjct: 171 KESINKAVKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDSKINFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMD I  + G PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFNGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIMRCD++ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMRCDIIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G +++ +SGL +  A  + + AQKIV  V
Sbjct: 351 GTNVKEGKQILKDSGLAIEPANTMAEGAQKIVKLV 385


>gi|228475020|ref|ZP_04059748.1| succinyl-CoA synthetase beta chain [Staphylococcus hominis SK119]
 gi|228271005|gb|EEK12393.1| succinyl-CoA synthetase beta chain [Staphylococcus hominis SK119]
          Length = 388

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESVNKAAKFLLSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++ ESGL +  A  + + AQ+IV  VK
Sbjct: 351 GTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVK 386


>gi|29654690|ref|NP_820382.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 493]
 gi|30581057|sp|P53592|SUCC_COXBU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29541958|gb|AAO90896.1| succinyl-CoA synthetase beta chain [Coxiella burnetii RSA 493]
          Length = 390

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 277/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|239947280|ref|ZP_04699033.1| succinyl-CoA synthetase beta chain [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239921556|gb|EER21580.1| succinyl-CoA synthetase beta chain [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 386

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTERINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L L+
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQVKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A KE+ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKEIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A+K
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAASKIVEAIK 386


>gi|296122653|ref|YP_003630431.1| succinyl-CoA synthetase, subunit beta [Planctomyces limnophilus DSM
           3776]
 gi|296014993|gb|ADG68232.1| succinyl-CoA synthetase, beta subunit [Planctomyces limnophilus DSM
           3776]
          Length = 394

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/395 (49%), Positives = 268/395 (67%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHE+QAK LL K  V V +G+V  +   A++A   L   + VVKSQIHAGGRGKGRFK
Sbjct: 1   MKIHEFQAKELLAKAGVAVPRGIVAKTPEEAQAAYGQLGTAVAVVKSQIHAGGRGKGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   + GV +  S +   ++   +LG+TL+T QTG  G +V  + VE G  I RE+Y 
Sbjct: 61  EQP--EQPGVVLVKSAEDAAANASRMLGNTLVTIQTGEEGKKVQTLLVEQGLKIAREIYA 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + +VDR       I S++GGMDIEEVA  +P+KI     DP+ G+       L   L L+
Sbjct: 119 ACVVDREVAGPVIIVSSEGGMDIEEVAAHHPEKILTEAFDPVYGLEGYQARKLAFALGLE 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +    F  L K F D D S+ EINPL++ + G L  LD+K++FDDNAL+RH ++ 
Sbjct: 179 GNALKNAEKFFRQLSKFFLDNDCSMAEINPLVVTEEGELLALDAKVTFDDNALFRHQNVL 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD++EE+  EIEA++  LSY+ LDGN+GC+VNGAGLAM+TMD+IKL+GG PANFLDVG
Sbjct: 239 AYRDLAEEEPSEIEAQKWGLSYVKLDGNLGCLVNGAGLAMSTMDLIKLHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D+V  AF+II +D +VKGIL+NIFGGIM+CD +V  +L+A  ++ I +PLV+RLE
Sbjct: 299 GGANVDQVTEAFRIILADKNVKGILVNIFGGIMKCDTIVTALLTAYDKIGIQVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++  +++AESG  +   +DL DAA+K V ++
Sbjct: 359 GTNVELARKMLAESGKKITAGLDLTDAAKKAVASI 393


>gi|223044213|ref|ZP_03614250.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus capitis SK14]
 gi|314933426|ref|ZP_07840791.1| succinyl-CoA synthase, beta subunit [Staphylococcus caprae C87]
 gi|222442363|gb|EEE48471.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus capitis SK14]
 gi|313653576|gb|EFS17333.1| succinyl-CoA synthase, beta subunit [Staphylococcus caprae C87]
          Length = 388

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESIGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +V+GI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVRGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|153207681|ref|ZP_01946328.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           'MSU Goat Q177']
 gi|212218994|ref|YP_002305781.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii CbuK_Q154]
 gi|226734939|sp|B6J8N7|SUCC_COXB1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120576377|gb|EAX33001.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           'MSU Goat Q177']
 gi|212013256|gb|ACJ20636.1| succinyl-CoA synthetase beta chain [Coxiella burnetii CbuK_Q154]
          Length = 390

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 277/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIASDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|237749081|ref|ZP_04579561.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           OXCC13]
 gi|229380443|gb|EEO30534.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           OXCC13]
          Length = 388

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/400 (53%), Positives = 274/400 (68%), Gaps = 16/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G    SV  A  A K L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYGVTTPRGFPCFSVDEAVDAAKKLGGNVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     EILG TL+T QTGP G  V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRKYASEILGMTLVTHQTGPEGRLVKRLLIEEGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
            ++VDR +  VA +AS++GGM+IE+VA+D P+ I K+ IDP+ G+T    ED+A    M 
Sbjct: 111 GMVVDRATQRVALMASSEGGMNIEDVARDTPELIHKVFIDPVKGLTDAEGEDIARKIGMP 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           E    A  +       LYKAF + D SL EINPLI   + R+  LD+K +FD NA+YRH 
Sbjct: 171 E---AAVKETCKFMQGLYKAFVETDASLAEINPLIRTGDNRVIALDAKFNFDSNAMYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +IQE RD+ EE+  EI+A + +L+YI+LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL
Sbjct: 228 EIQEYRDLDEENPDEIQASKFDLTYISLDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  +KV  AFKI+ S+  VK IL+NIFGGIMRCDV+ +GI++A K+V + +PLV+
Sbjct: 288 DVGGGATTEKVTEAFKIMLSNPDVKAILVNIFGGIMRCDVIAEGIVAAAKQVSLKVPLVV 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NVD G  ++A+SGL +I+A  + DAAQK V+A KG
Sbjct: 348 RLEGTNVDQGKEILAKSGLPIISASGMADAAQKAVNAAKG 387


>gi|165918982|ref|ZP_02219068.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 334]
 gi|165917307|gb|EDR35911.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 334]
          Length = 390

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 277/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|254786519|ref|YP_003073948.1| succinyl-CoA synthetase subunit beta [Teredinibacter turnerae
           T7901]
 gi|259511792|sp|C5BL83|SUCC_TERTT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|237686221|gb|ACR13485.1| putative succinyl-CoA synthetase beta chain [Teredinibacter
           turnerae T7901]
          Length = 389

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/397 (50%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KGV   +   A SA   L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGVAAETPAEAASAAGILGGDTWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +    ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKAEIEEFAKQWLGKNLVTYQTDENGQPVSRILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+KI K +IDPL G        L   L L+
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPEKILKAIIDPLAGAQPYQARDLAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++LLEINPL+I K G L  LD+KI+ D NALYR   ++
Sbjct: 171 GKQIKQFTQIFLGLAKMFKEKDLALLEINPLVITKEGDLHCLDAKINIDGNALYRQPALK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SV  +LINIFGGI+RCD++ +G++ AV+EV + IP+V RLE
Sbjct: 291 GGATKERVVEAFKIILSDESVSAVLINIFGGIVRCDLIAEGVIGAVEEVGVKIPVVCRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAA+++V A KG
Sbjct: 351 GNNAELGAKVLADSGLNIIAATSLTDAAEQVVKAAKG 387


>gi|149177237|ref|ZP_01855843.1| succinyl-CoA synthetase (beta subunit) [Planctomyces maris DSM
           8797]
 gi|148843951|gb|EDL58308.1| succinyl-CoA synthetase (beta subunit) [Planctomyces maris DSM
           8797]
          Length = 395

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 267/392 (68%), Gaps = 2/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L R+  +PV +G+V  +V  A +A + L  PL VVKSQIHAGGRGKGRFK
Sbjct: 1   MKIHEYQAKQLFREAGIPVPEGIVAKTVDEAVAAFEKLDRPLVVVKSQIHAGGRGKGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   + GV +  S + V  +   +LGSTL+T QTG  G +VN +++E G DI +ELYL
Sbjct: 61  EYP--EQAGVVLARSAEEVRENAERMLGSTLVTIQTGEEGKQVNTLFIEQGLDIAQELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +G    I ST+GGM+IE VA++ P+KI         G+       L   L ++
Sbjct: 119 GCVVDREAGGPVLILSTEGGMEIEVVAEESPEKILSEPFSIHTGLLGFQARKLAFKLGME 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           + + F D D S+ EINPL+I   G L  LD+K+SFD+NA++RH  ++
Sbjct: 179 GKTVRSAEKFLCQMSRFFIDNDCSMTEINPLVITGEGELVALDAKVSFDENAMFRHKPLE 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E++A    LSY+ LDGNIGC+VNGAGLAM+TMD+IK +GG PANFLDVG
Sbjct: 239 ELRDLTEEEPAEVDAGNAGLSYVKLDGNIGCLVNGAGLAMSTMDLIKHHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D+V+ AF+II +D +VK +L+NIFGGIM+CD +V  +L A ++V   +PLV+RLE
Sbjct: 299 GGANVDQVSEAFRIILADDNVKAVLVNIFGGIMKCDTIVTALLEAYEKVGFTVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NVD    ++A SG ++I+A DL DAAQK+V
Sbjct: 359 GTNVDKAREMLAGSGRDIISATDLTDAAQKVV 390


>gi|217969348|ref|YP_002354582.1| succinyl-CoA synthetase subunit beta [Thauera sp. MZ1T]
 gi|217506675|gb|ACK53686.1| succinyl-CoA synthetase, beta subunit [Thauera sp. MZ1T]
          Length = 386

 Score =  391 bits (1005), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/396 (50%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLRKY V   +G    SV AA  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRKYGVVTPRGFHCVSVDAAVKAAEELGGKIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG  L+T QTGP G +V  + +E+GADI  E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQHANDILGMQLVTHQTGPEGQKVRNLLIEEGADIKHEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA + P+KI K+ +DPL+G+T    A L   + + 
Sbjct: 111 AALTDRATQTVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLVGLTDAQAAELAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D F  LY  + + D SL EINPLI+  NG ++ LD+K +FD NALYRH +I 
Sbjct: 171 EGSVAKAVDAFKKLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD  EED+ EIEA +++L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 DFRDFDEEDADEIEASKYDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIMRCD +  G+++A +EV +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPQVKGILVNIFGGIMRCDTIATGVVAAAREVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++A+SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKILADSGLPIIAADTMAEAATKIVAAVK 386


>gi|149194472|ref|ZP_01871568.1| Succinyl-CoA synthetase, beta subunit [Caminibacter mediatlanticus
           TB-2]
 gi|149135216|gb|EDM23696.1| Succinyl-CoA synthetase, beta subunit [Caminibacter mediatlanticus
           TB-2]
          Length = 390

 Score =  391 bits (1005), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/398 (51%), Positives = 261/398 (65%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + RKY VP  +G V  S   A    + L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIFRKYGVPTPRGGVAFSAPEARKVAEELGGNLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V    +E+LG TL+T QTGP G  V  VY+E+GADI  E YL
Sbjct: 58  -------GGVKLARSLDEVEEIAKEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKAEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AST+GGM+IEEVA+  P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIVKVAIDPTIGFQGFHARKLAFGLGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              + +       LY  + D D  ++EINPLI   +G+   LD+K+ FDDNALYRH +I 
Sbjct: 171 KDEQKEFIKFATALYNVYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EE+  EIEAK++ LSYI LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLDEEEPTEIEAKKYGLSYIKLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D VA  F+II SD +VK I +NIFGGI+RCD +  GIL A ++V++N+P+++RL+
Sbjct: 291 GGANPDTVAKGFEIILSDPNVKSIFVNIFGGIVRCDRIANGILQATEKVEVNVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      ++  + + N+I A DL D AQK V A KG
Sbjct: 351 GTNAKEAAEILRNANIKNIIPATDLKDGAQKAVKAAKG 388


>gi|283782078|ref|YP_003372833.1| succinyl-CoA synthetase, beta subunit [Pirellula staleyi DSM 6068]
 gi|283440531|gb|ADB18973.1| succinyl-CoA synthetase, beta subunit [Pirellula staleyi DSM 6068]
          Length = 396

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/396 (50%), Positives = 265/396 (66%), Gaps = 2/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L RK  V V +G V  +   A +A   L GP+ VVK+QIHAGGRGKG  K
Sbjct: 1   MKIHEYQGKELFRKAGVAVLRGKVARTPEEAAAAFTELGGPIAVVKAQIHAGGRGKGTTK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A    GV++  S +   +  R ++G TL+T QTG  G  VN V+VE+G  I RELYL
Sbjct: 61  ENSAQR--GVQLVKSAEEAATVARNLIGKTLVTIQTGEEGKVVNQVFVEEGCKIARELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     + ST+GG++IE VA D P+KIFK   DP +G+    V  LC +L ++
Sbjct: 119 GIVLDRAAAKPVLMVSTEGGVEIETVAHDTPEKIFKEHFDPHVGLLPYQVRKLCVLLGIK 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          L K +   D +++EINPL+I + G L  LD+K++FDDNA++RH D+ 
Sbjct: 179 GASVASADKFMRALCKLWVQLDCAMVEINPLVITEAGDLVALDAKVAFDDNAMFRHKDLA 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+ A    LSY+ LDGNIGC+VNGAGLAM+TMDIIKL+GG PANFLDVG
Sbjct: 239 ELRDLTEEDPAEVRASNTGLSYVKLDGNIGCLVNGAGLAMSTMDIIKLHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AF+II SD +VKGIL+NIFGGI RC  +   I++A K V  N+PLV+RLE
Sbjct: 299 GGANEAQVTEAFRIILSDKNVKGILVNIFGGIARCTTIASAIVAASKAVGFNVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  V+ G +++ ESG+ +I A  L DAA KIV A K
Sbjct: 359 GTEVEEGKKILRESGVKLIAADGLTDAAIKIVEAAK 394


>gi|221126321|ref|XP_002165714.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
 gi|260221892|emb|CBA30910.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 387

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/397 (50%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     EILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKRLASEILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T+E    +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITTEQSKKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     D+F  LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDIFAKLYKCYMDTDASLVEINPLNCDSKGNVMALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AYRDLDEEDAAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDAIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNDKVKAILVNIFGGIMKCDTIATGVITACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL +I+A  + +AAQK+V AVKG
Sbjct: 351 GTNEELGKKMLAESGLPIISADSMAEAAQKVVAAVKG 387


>gi|148266359|ref|YP_001233065.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|146399859|gb|ABQ28492.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           uraniireducens Rf4]
          Length = 387

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/396 (53%), Positives = 267/396 (67%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MNIHEYQAK +LR + VPV  G V  +   A E A +   GP +VVK+QIHA        
Sbjct: 1   MNIHEYQAKGILRSFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHA-------- 51

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  +   V +  R++LG  L T QTGP G  V  V VE+G  I RELY
Sbjct: 52  --GGRGKGGGVKLARTPDEVGNIARDMLGMILSTHQTGPEGKVVTRVLVENGCIIARELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SLLVDR+S  V  +AST+GGMDIEEVA   P+KI+   +DPL+G+T      L   L L
Sbjct: 110 VSLLVDRSSSKVTVMASTEGGMDIEEVAAKTPEKIYMEAVDPLVGLTQFQCRKLAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+  +    +F  LY  F   D SLLEINPL++  +  L  LD+K  FDDNA++RH  I
Sbjct: 170 EGKLVVKAVKMFEGLYTTFIACDCSLLEINPLVVTADSELLALDAKFGFDDNAVFRHPKI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD  EED  E+EA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 ADLRDYDEEDPNEVEASQHDLSYISLSGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A K+V I +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDRNVKGILVNIFGGIMKCDVIATGVIEAAKQVGIKVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV  G +L+AESGL+++ A  + DAA+KIV AV
Sbjct: 350 EGTNVKKGTQLLAESGLDIVAADGMADAARKIVKAV 385


>gi|212212234|ref|YP_002303170.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii CbuG_Q212]
 gi|226734940|sp|B6IZ97|SUCC_COXB2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|212010644|gb|ACJ18025.1| succinyl-CoA synthetase beta chain [Coxiella burnetii CbuG_Q212]
          Length = 390

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 276/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG  L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGMRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|254361864|ref|ZP_04977998.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213]
 gi|153093403|gb|EDN74394.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213]
          Length = 386

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/394 (49%), Positives = 270/394 (68%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK + ++Y +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +Y+E+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETCNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AS+ GGM+IEEVA+  P+ I K +IDPL G        L   L L+
Sbjct: 111 GAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L   F +KD++LLE+NPL+I K G+L  LD+K+S D NALYRH +++
Sbjct: 171 GDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL+D S++D RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAFK+I SD +VK +L+NIFGGI+RCD++  G+++AV EV +N+P+++RLE
Sbjct: 291 GGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIAAVNEVGVNVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N   G  ++A SGL+++ A  L  AA+  V +
Sbjct: 351 GTNAAQGREILANSGLSILAASSLKQAAELAVKS 384


>gi|161830287|ref|YP_001597238.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii RSA 331]
 gi|189029904|sp|A9N8R8|SUCC_COXBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161762154|gb|ABX77796.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 331]
          Length = 390

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 276/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+S +N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSDMNIIAAKGFADAAEQIVKQV 386


>gi|303252122|ref|ZP_07338290.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247458|ref|ZP_07529503.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648905|gb|EFL79093.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855961|gb|EFM88119.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 388

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS+ GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASSAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRLIAANTLTQAAQLAVKAAEG 387


>gi|295696101|ref|YP_003589339.1| succinyl-CoA synthetase, beta subunit [Bacillus tusciae DSM 2912]
 gi|295411703|gb|ADG06195.1| succinyl-CoA synthetase, beta subunit [Bacillus tusciae DSM 2912]
          Length = 385

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/395 (51%), Positives = 263/395 (66%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+L+ Y V V +G V  SV  A    + L G   VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAILKTYGVAVPQGQVAFSVEEAVRIAEGLGGKA-VVKAQIHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V    +++LGSTL+T QTGP G  V  + +E   DI +E Y+
Sbjct: 57  -------GGVKVAKSLEQVREYAQQLLGSTLVTHQTGPEGKVVKRLLIEQLTDIQKEYYI 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +G V  +AS +GGM+IEEVA   P+KI +  IDP +G        L   + + 
Sbjct: 110 GLVVDRATGRVVIMASEEGGMEIEEVAAKTPEKIVRETIDPAVGFMPFQARKLAYAIHIP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+AF DKD S+ EINPL++  +G +  LD+K++FD N L+RH ++ 
Sbjct: 170 KPLVNKAVQFMSGLYRAFVDKDCSVAEINPLVVTGDGNILALDAKLNFDSNGLFRHPELL 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED RE +A +  LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 230 ELRDPDEEDPREQQAAKFGLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII  D  VKGIL+NIFGGIM+CDV+  G++ A +++ ++ PLV+RLE
Sbjct: 290 GGASTEKVTEAFKIILQDEKVKGILVNIFGGIMKCDVIANGVVEAARQLGLDRPLVVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++AESGL ++ A  + DAA+KIV  V
Sbjct: 350 GTNVELGKKILAESGLKIVPADSMADAAEKIVSLV 384


>gi|325109408|ref|YP_004270476.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Planctomyces
           brasiliensis DSM 5305]
 gi|324969676|gb|ADY60454.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 395

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 277/397 (69%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L R+  VPV +G+V  S+     A + L G L VVKSQIHAGGRGKG FK
Sbjct: 1   MKIHEYQAKQLFREAGVPVPRGIVAHSLDDVTQAFQQLGGALAVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P + +G V V+S+ ++  +  R ++G+TL+T QTG  G +VN ++VE+G +I RELYL
Sbjct: 61  EQP-EQRGVVLVKSAGEAHENAGR-MMGNTLVTIQTGEEGKQVNTLFVEEGLEIARELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S     I ST+GGM+IEEVA+  P+KI +   D  +G+       +   L ++
Sbjct: 119 GIVIDRESSCPVLIMSTEGGMEIEEVAEHSPEKIIREYFDVALGLLPYQARKMAFALGME 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           + + F D D S+ EINPLI+  +G L  LD+K++FDDNAL+RH +++
Sbjct: 179 GKTVRSAEKFLTKVCQFFIDNDCSMTEINPLIVTGDGELVALDAKVTFDDNALFRHKNLE 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+SEE+  E++A+   LSY+ LDGNIGC+VNGAGLAM+TMD+IKL+GG PANFLDVG
Sbjct: 239 PFRDLSEEEPAEVKAQDAGLSYVKLDGNIGCLVNGAGLAMSTMDLIKLHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  AF+II +D +VK +L+NIFGGIM+CDV+V+ +L+A  +V  ++PLV+RLE
Sbjct: 299 GGATVDAVTEAFRIILADENVKAVLVNIFGGIMKCDVIVEALLTAYDKVGFHVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+    ++A SG ++ITA +L DAA+K+V  ++G
Sbjct: 359 GTNVEKAREMLAASGKDIITAENLTDAAKKVVGTLQG 395


>gi|67459057|ref|YP_246681.1| succinyl-CoA synthetase subunit beta [Rickettsia felis URRWXCal2]
 gi|75536509|sp|Q4ULQ7|SUCC_RICFE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67004590|gb|AAY61516.1| Succinyl-CoA synthetase beta chain [Rickettsia felis URRWXCal2]
          Length = 386

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRLASCITFIASTEGGVDIEEVAEKTPEKIVKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFVETDAAQIEINPLIVQTDGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|238650298|ref|YP_002916150.1| succinyl-CoA synthetase subunit beta [Rickettsia peacockii str.
           Rustic]
 gi|259511791|sp|C4K0K1|SUCC_RICPU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|238624396|gb|ACR47102.1| succinyl-CoA synthetase subunit beta [Rickettsia peacockii str.
           Rustic]
          Length = 386

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTQTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGHLLALDAKITFDDNGLLRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|165975911|ref|YP_001651504.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|307249682|ref|ZP_07531664.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307260934|ref|ZP_07542618.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|226733924|sp|B0BTV5|SUCC_ACTPJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|165876012|gb|ABY69060.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|306858291|gb|EFM90365.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306869373|gb|EFN01166.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 388

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCHQWLGQRLVTFQTDKNGQLVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRLIAANTLTQAAQLAVKAAEG 387


>gi|171057186|ref|YP_001789535.1| succinyl-CoA synthetase subunit beta [Leptothrix cholodnii SP-6]
 gi|171059380|ref|YP_001791729.1| succinyl-CoA synthetase subunit beta [Leptothrix cholodnii SP-6]
 gi|170774631|gb|ACB32770.1| succinyl-CoA synthetase, beta subunit [Leptothrix cholodnii SP-6]
 gi|170776825|gb|ACB34964.1| succinyl-CoA synthetase, beta subunit [Leptothrix cholodnii SP-6]
          Length = 386

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ KA+LR++++PV +G    +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKAILRQFDIPVPRGHAAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDDVKKLAEQILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR S  VAFIAS++GGMDIEEVA   P+KI   +IDPL G+ +E    +   + L 
Sbjct: 111 SLVTDRQSQKVAFIASSEGGMDIEEVAHSTPEKIITEVIDPLTGLGAEQAEKIARAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++      LF NLY+ + + D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 AESIAQAVTLFQNLYRCYMETDASLVEINPLNRDSKGGLIALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ACRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIAEGVITACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I A  + +AA  IV+AVK
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMAEAATAIVNAVK 386


>gi|294054271|ref|YP_003547929.1| succinyl-CoA synthetase, beta subunit [Coraliomargarita akajimensis
           DSM 45221]
 gi|293613604|gb|ADE53759.1| succinyl-CoA synthetase, beta subunit [Coraliomargarita akajimensis
           DSM 45221]
          Length = 398

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 269/396 (67%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG-PLYVVKSQIHAGGRGKGRF 59
           MNIHEYQAK LL  Y VPV KG    +    E+AI  L      VVK+QIHAGGRGKG F
Sbjct: 1   MNIHEYQAKRLLADYGVPVPKGYAAQTSREVETAISHLSDDQKIVVKAQIHAGGRGKGTF 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +     KGGV+V    ++ +     +LG+TL+T QT   G +V  +Y+ +  +I  E Y
Sbjct: 61  VD---GYKGGVKVVDGREAALEAAGHMLGNTLVTAQTSAAGRKVQTLYLTEACEIAHEYY 117

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++++DR +     IAST+GGMDIEEVA   P+KI ++ I P +G+       +   L  
Sbjct: 118 LAIVLDRETAQSVIIASTEGGMDIEEVADKTPEKIIRVPISPTMGLRHHHCRRVAFELGF 177

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G        +   LYK F +K+  L+EINPLI    G++  LD+K+SFD NA+++H DI
Sbjct: 178 EGDQVKQFARILTGLYKLFWEKNAMLVEINPLITTPEGQVVALDAKVSFDGNAVFQHPDI 237

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD++EED +E+EA ++NLSYIALDGNI C+VNGAGLAMATMDIIK +GG PANFLDV
Sbjct: 238 MQLRDLNEEDPKEVEASKYNLSYIALDGNIACLVNGAGLAMATMDIIKSFGGEPANFLDV 297

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA++D+V AAFKII SD +V+GIL+NIFGGIM+CDV+ +GI++A K V++ +PLV+RL
Sbjct: 298 GGGANEDQVTAAFKIILSDPNVEGILVNIFGGIMKCDVIARGIVAAAKNVELKVPLVVRL 357

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NVD G  ++ ESG+ +  A  L +AA+ I   V
Sbjct: 358 EGTNVDAGKEILRESGVALTPADSLVEAAEIITKQV 393


>gi|154706461|ref|YP_001424006.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii Dugway
           5J108-111]
 gi|189029903|sp|A9KBQ4|SUCC_COXBN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|154355747|gb|ABS77209.1| succinyl-CoA synthetase beta chain [Coxiella burnetii Dugway
           5J108-111]
          Length = 390

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 276/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AF+II SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFRIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+S +N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSSMNIIAAKGFADAAEQIVKQV 386


>gi|53728850|ref|ZP_00134895.2| COG0045: Succinyl-CoA synthetase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207936|ref|YP_001053161.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           L20]
 gi|307256506|ref|ZP_07538287.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|189046872|sp|A3MZH0|SUCC_ACTP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126096728|gb|ABN73556.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306864916|gb|EFM96818.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 388

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRLIAANTLTQAAQLAVKAAEG 387


>gi|329897262|ref|ZP_08272000.1| Succinyl-CoA ligase [ADP-forming] beta chain [gamma proteobacterium
           IMCC3088]
 gi|328921258|gb|EGG28654.1| Succinyl-CoA ligase [ADP-forming] beta chain [gamma proteobacterium
           IMCC3088]
          Length = 387

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 273/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAQYGLPVSKGYAVDTPEEAVAAAEKIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +  ++ LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTTDEVAAFAKQWLGQRLVTYQTDENGQPVSKILVESCTDIAEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI + +IDPL+G        L   L LQ
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILRAVIDPLVGPQPFQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F +KD++L+EINPL+I + G L  LD+K+  D NA+YR   + 
Sbjct: 171 GDQIKQFVKIFMGLATMFQEKDLALIEINPLVITEQGNLHCLDAKLGVDSNAMYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDG+IGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKWELNYVALDGDIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDENVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAA+++V A KG
Sbjct: 351 GNNAELGQQVLAESGLNIIAATSLTDAAEQVVAAAKG 387


>gi|171914561|ref|ZP_02930031.1| succinyl-CoA synthetase subunit beta [Verrucomicrobium spinosum DSM
           4136]
          Length = 395

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/395 (51%), Positives = 263/395 (66%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L  K+ V   KG V ++   A +A + + G   VVK+Q+HAGGRGKG F 
Sbjct: 1   MNIHEYQAKELFEKFGVATPKGKVAATAEEAGAAAREIGGTGLVVKAQVHAGGRGKGTFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V ++ +       ++LG TL+T QTGP G  V+ V +    DI +E Y 
Sbjct: 61  N---GFKGGVHVINTAEEAQEIAGKMLGQTLVTHQTGPEGKLVSKVLIAKSVDIAKEHYF 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR+S   A IAST+GGM+IEEVA+  P+KI K  + P +G+ +     +   L L+
Sbjct: 118 AILFDRSSSRHAIIASTEGGMNIEEVAEKTPEKIIKEFVHPTLGLQAYQCRKIAAALGLR 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  LYK +   D SL+E+NPL I  + ++  LD+K +FDDNALYR  DI 
Sbjct: 178 GALMTQAVKLFTALYKLYIQSDCSLVEVNPLAITTDNQVVALDAKFNFDDNALYRQKDIV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED RE+ A +  LSYI LDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 238 TLRDTSEEDPREVAASEFGLSYIGLDGNIACLVNGAGLAMSTMDIIKFHGGEPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+VAAAFKII  D +VKGIL+NIFGGIM C+V+  GI++A +E  +++PLV+RLE
Sbjct: 298 GGASKDQVAAAFKIILGDPNVKGILVNIFGGIMDCNVIATGIIAAAQETGLSLPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +  A DL DAAQKIV AV
Sbjct: 358 GNNVAAGKETLANSGLAITGADDLTDAAQKIVAAV 392


>gi|145219368|ref|YP_001130077.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Prosthecochloris vibrioformis DSM 265]
 gi|189081768|sp|A4SDL6|SUCC_PROVI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145205532|gb|ABP36575.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 391

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/399 (48%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A+ A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAHSPEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +       +++G+TL+T QTGP G  V  + VE+G +I R
Sbjct: 61  A----------GGVKLAKSPEEAYEIASQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIDR 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE+VA++ P ++ K+ +DPL G+           
Sbjct: 111 EFYVGITLDRATSQNVLMISTEGGMEIEKVAEETPDRLLKIQVDPLFGLQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+          +LYKA+   D +L EINPL++ K GR+  LD+KI+FD NALYRH
Sbjct: 171 LGLEGEQFRSAVSFIMSLYKAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD++EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMDII+L GG PANF
Sbjct: 231 KDFLELRDITEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A K++ +N+P++
Sbjct: 291 LDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N DI  +++ ESGLN+I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNADIAQKMLDESGLNLIAADGLKDAAQKVTEAL 389


>gi|251772185|gb|EES52755.1| succinyl-CoA synthetase, beta subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 395

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/407 (50%), Positives = 268/407 (65%), Gaps = 24/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG------PLYVVKSQIHAGGR 54
           MNIHEYQAK L R Y V V  GVV+ S   A   I    G       +Y VK+QIHAGGR
Sbjct: 1   MNIHEYQAKELFRSYGVAVPSGVVVDSPEEARRLISEKSGIFSGSSAVYAVKAQIHAGGR 60

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           GK           GGV++  S+  +   +  +LG TL+T QTGP G  V  V++E+GA I
Sbjct: 61  GKA----------GGVKIAKSVSEIPGYVEALLGKTLVTHQTGPEGRLVRKVWIEEGAQI 110

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS---EDVA 171
            RE YLSL++DR+S  ++ +AST+GGM+IEEV+  +P+KI  L +DP +G  S     VA
Sbjct: 111 AREFYLSLVLDRSSRRISILASTEGGMEIEEVSAAHPEKILTLSVDPEMGCKSFVGRRVA 170

Query: 172 SLCDM-LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           S   + + L G        L  NLY+ F D D  ++EINPLI   +GRL  LD+K+SFDD
Sbjct: 171 SFLGLPITLYGSF----STLLANLYRFFLDTDCMMVEINPLIQTGDGRLLALDAKVSFDD 226

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NALYR   I  LRD+ EE+  EIEA +H L+Y+ LDG+I CMVNGAGLAMATMD+I L G
Sbjct: 227 NALYRQEKILALRDLFEENELEIEASKHRLNYVKLDGSIACMVNGAGLAMATMDVIALAG 286

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLDVGGGA ++ V  AF+I+  D  VKGI +NIFGGI+RC+ +  GI++A K+VK
Sbjct: 287 GTPANFLDVGGGASKETVEQAFRILLGDPEVKGIFVNIFGGIVRCERIAGGIIAAAKDVK 346

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +++PLV+RL+G N   G  ++ ESGL++  A +L + AQKIV AVKG
Sbjct: 347 LHVPLVVRLQGTNAKEGREMLRESGLDLQVAEELFEGAQKIVQAVKG 393


>gi|120613315|ref|YP_972993.1| succinyl-CoA synthetase subunit beta [Acidovorax citrulli AAC00-1]
 gi|189046867|sp|A1TW81|SUCC_ACIAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120591779|gb|ABM35219.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidovorax
           citrulli AAC00-1]
          Length = 386

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/396 (51%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     +ILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKKLAGDILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P KI   +IDPL G+T E    + + + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPDKIVTEMIDPLTGITPEQGRKVAEAIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     D+F  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GKSVDQALDIFAKLYKCYMDTDASLVEINPLNCDSKGDLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|264680907|ref|YP_003280817.1| succinyl-CoA synthetase subunit beta [Comamonas testosteroni CNB-2]
 gi|299530898|ref|ZP_07044312.1| succinyl-CoA synthetase subunit beta [Comamonas testosteroni S44]
 gi|262211423|gb|ACY35521.1| succinyl-CoA synthetase, beta subunit [Comamonas testosteroni
           CNB-2]
 gi|298721119|gb|EFI62062.1| succinyl-CoA synthetase subunit beta [Comamonas testosteroni S44]
          Length = 386

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/396 (50%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVQKLSEQILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T      +   + L+
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITEAQSRKVAAAIGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     DLF  +YK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GKSVDQAVDLFAKIYKCYMDTDASLVEINPLNCDSKGDLMALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AFRDLDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIATGVVTACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ +SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKQILKDSGLPIIAADTMAEAATKIVAAVK 386


>gi|148262238|ref|YP_001228944.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|148265508|ref|YP_001232214.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|146395738|gb|ABQ24371.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|146399008|gb|ABQ27641.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           uraniireducens Rf4]
          Length = 388

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/396 (52%), Positives = 266/396 (67%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MNIHEYQAKA+LR++ VPV  G V  +   A E A +   GP +VVK+QIHA        
Sbjct: 1   MNIHEYQAKAILREFGVPVPDGHVCYNGASAREWAKRLGEGP-WVVKAQIHA-------- 51

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  +   V    R++LG TL T QTGP G  V  V VE+G +I  ELY
Sbjct: 52  --GGRGKGGGVKLARTADEVRKIARDMLGMTLRTHQTGPEGKVVTRVLVENGCNIANELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SL+VDR S  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T+     +   L L
Sbjct: 110 VSLVVDRGSSRVTVMASTEGGMDIEEVAAQTPEKIFTETVDPLVGLTAFQCRKIAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LYK F   D S+LEINPL+I     L  LD+K  FDDNA++RH  +
Sbjct: 170 GGKLVNKAVSVLQGLYKTFIACDCSMLEINPLVITAEDELLALDAKFGFDDNAVFRHPKL 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED  E+EA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 GDMRDYDEEDPNEVEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +V+GIL+NIFGGIM+CD++  G++ A K+V +N+PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDKNVQGILVNIFGGIMKCDIIATGVVEAAKQVSLNVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV  G  ++AESGLN++ A  + DAAQKIV AV
Sbjct: 350 EGTNVARGKEILAESGLNIVAADGMADAAQKIVQAV 385


>gi|221069774|ref|ZP_03545879.1| succinyl-CoA synthetase, beta subunit [Comamonas testosteroni KF-1]
 gi|220714797|gb|EED70165.1| succinyl-CoA synthetase, beta subunit [Comamonas testosteroni KF-1]
          Length = 386

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/396 (50%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVQKLSEQILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T      +   + L+
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITEAQSRKVAAAIGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     DLF  +YK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GKSVDQAVDLFAKIYKCYMDTDASLVEINPLNCDSKGDLMALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AFRDLDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIANGVVTACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ +SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKQILKDSGLPIIAADTMAEAATKIVAAVK 386


>gi|160872177|ref|ZP_02062309.1| succinyl-CoA synthetase beta chain (SCS-beta) [Rickettsiella
           grylli]
 gi|159120976|gb|EDP46314.1| succinyl-CoA synthetase beta chain (SCS-beta) [Rickettsiella
           grylli]
          Length = 390

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 276/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ KALL +Y +PV +G + S+V  A +A + L G  ++VK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKALLSEYGLPVPRGKLASTVEEALAATEALGGSAWMVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +S ++V  +++ +LG  L+T QT   G  VN V +    DI RELYL
Sbjct: 58  -------GGVKYVTSKEAVAIEVKRLLGQRLVTPQTDEKGQPVNHVLIAQPCDIKRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++ R++  +  +AST+GG++IE+VA++ P+KI K++ DPL+GV       L   L+L 
Sbjct: 111 GVVLCRSTQRIIMMASTEGGVEIEKVAEETPEKIVKVICDPLLGVMPYQARDLAFQLKLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   L + F ++D+SL+EINPLI  + G L  LD+K+  DDNAL+R  + +
Sbjct: 171 PNQVKEFTSILLGLGRLFVERDLSLIEINPLICDEKGHLICLDAKVVVDDNALFRQPECR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED+RE  A    L+YIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPSQEDARENRAHDWELNYIALDGDIGCMVNGAGLAMATMDLIKLQGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII SD  VKGIL+NIFGGI+RCD++ +GI+ AVKEV I IP+V+RLE
Sbjct: 291 GGATQERVAEAFKIILSDEKVKGILVNIFGGIVRCDMIAEGIIGAVKEVGIKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G + ++ESGLN+I A  L +AA+ I+ AVK
Sbjct: 351 GNNADVGAKKLSESGLNIIAAKSLTEAAEHIIAAVK 386


>gi|157964516|ref|YP_001499340.1| succinyl-CoA synthetase subunit beta [Rickettsia massiliae MTU5]
 gi|189081786|sp|A8F1K7|SUCC_RICM5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157844292|gb|ABV84793.1| Succinyl-CoA synthetase beta chain [Rickettsia massiliae MTU5]
          Length = 386

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINDTIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEE+A+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEIAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDAKITFDDNGLFQHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD++++  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERIKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|157828470|ref|YP_001494712.1| succinyl-CoA synthetase subunit beta [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165933188|ref|YP_001649977.1| succinyl-CoA synthetase subunit beta [Rickettsia rickettsii str.
           Iowa]
 gi|189081787|sp|B0BXJ5|SUCC_RICRO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081788|sp|A8GS29|SUCC_RICRS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157800951|gb|ABV76204.1| succinyl-CoA synthetase subunit beta [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165908275|gb|ABY72571.1| succinyl-CoA synthetase beta chain [Rickettsia rickettsii str.
           Iowa]
          Length = 386

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G +IL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCEILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLLRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD +V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKAVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|870947|emb|CAA54876.1| putative succinyl-CoA synthetase beta subunit [Coxiella burnetii]
          Length = 390

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 275/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL KYN+ V    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKYLLNKYNIAVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|320539328|ref|ZP_08038997.1| putative succinyl-CoA synthetase, beta subunit [Serratia symbiotica
           str. Tucson]
 gi|320030453|gb|EFW12463.1| putative succinyl-CoA synthetase, beta subunit [Serratia symbiotica
           str. Tucson]
          Length = 388

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++ H AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPHEAEEAASKIGCGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDVLGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA+D P+ I K+ IDPL+G        L   L L 
Sbjct: 111 GAVVDRSSHRVVFMASTEGGVEIEKVAQDSPELIHKMTIDPLVGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFAKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 EMRDLSQEDERESRASQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +NIP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAA ++V AV+G
Sbjct: 351 GNNAELGTKKLADSGLNIIAATSLTDAAWQVVAAVEG 387


>gi|307245291|ref|ZP_07527379.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254240|ref|ZP_07536081.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258702|ref|ZP_07540434.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853632|gb|EFM85849.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862787|gb|EFM94740.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867053|gb|EFM98909.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 388

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGIKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQLVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL  I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRFIAANTLTQAAQLAVKAAEG 387


>gi|121606840|ref|YP_984169.1| succinyl-CoA synthetase subunit beta [Polaromonas naphthalenivorans
           CJ2]
 gi|189081766|sp|A1VUC0|SUCC_POLNA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120595809|gb|ABM39248.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 386

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/400 (49%), Positives = 263/400 (65%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIR----EILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                   G      +   I D++    EILG  L T QTGP G +V  +Y+EDGADI +
Sbjct: 52  -----GGRGKGGGVKVAKTIEDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQK 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+  E    + + 
Sbjct: 107 EYYVSLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEFIDPLTGLGEEQAVKIANG 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L  ++     D+F  LYK + D D SL+EINPL       L  LD+K +FD NAL+RH
Sbjct: 167 IGLPPESTAQAVDIFQKLYKCYMDTDASLVEINPLNRDSKNALMALDAKFNFDPNALFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI   RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANF
Sbjct: 227 ADIVAYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIMLKNPDVKGILVNIFGGIMKCDTIADGVIAACKAVNLSVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +R++G N D+G +++AESGL +I A  + +AA KIV AVK
Sbjct: 347 VRMKGTNEDLGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|94498999|ref|ZP_01305537.1| Succinyl-CoA synthetase, beta subunit [Oceanobacter sp. RED65]
 gi|94428631|gb|EAT13603.1| Succinyl-CoA synthetase, beta subunit [Oceanobacter sp. RED65]
          Length = 388

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/397 (51%), Positives = 276/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV++GVV ++   AE A   +PG  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAAYGLPVSEGVVATTAQEAEQAADKIPGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS + +    +  LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKLVSSKQEIADFAQSWLGKNLVTYQTDENGQPVNQILVESCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+KI K  IDPL G        +   L L+
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPEKILKAEIDPLTGAQPYQAREIAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F DKD++LLE+NPL+I K+G L  LD+KI+ D NALY H DIQ
Sbjct: 171 DKQIKQFTQIFLGLSKLFFDKDLALLEVNPLVITKDGDLHCLDAKINVDSNALYAHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED RE EA + +L+Y+ALDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 AMHDPSQEDGREAEAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIIKLSGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++++AESGL++I A  L DAAQ++V A  G
Sbjct: 351 GNNAELGSKVLAESGLDIIAAESLTDAAQQVVKAAGG 387


>gi|157825718|ref|YP_001493438.1| succinyl-CoA synthetase subunit beta [Rickettsia akari str.
           Hartford]
 gi|189081783|sp|A8GNF5|SUCC_RICAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157799676|gb|ABV74930.1| succinyl-CoA synthetase subunit beta [Rickettsia akari str.
           Hartford]
          Length = 386

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QT P G +VNC+Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTEPQGQKVNCLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA   P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAAKTPAKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFVETDAAQIEINPLIVQTDGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ + GNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMGGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL++I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLDIIPAHDLADAANKIVAAIR 386


>gi|145633074|ref|ZP_01788806.1| transcriptional regulator CysB [Haemophilus influenzae 3655]
 gi|144986300|gb|EDJ92879.1| transcriptional regulator CysB [Haemophilus influenzae 3655]
          Length = 389

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT  +G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLIQDVEEARSFAEKWLGQRLVTFQTDKSGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS+ GGMDIEE+A++ P  + K  IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASSAGGMDIEEIAQNSPHLLHKATIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GVQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV E+ + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIIRCDLIAEGVIAAVNEMGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++A+S +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILAQSDVNILTAQSLQQAAELAVNAAKG 387


>gi|66045252|ref|YP_235093.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae B728a]
 gi|75502458|sp|Q4ZUW7|SUCC_PSEU2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|63255959|gb|AAY37055.1| Succinyl-CoA synthetase, beta subunit [Pseudomonas syringae pv.
           syringae B728a]
 gi|330899190|gb|EGH30609.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330940363|gb|EGH43468.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330951686|gb|EGH51946.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae Cit 7]
 gi|330973464|gb|EGH73530.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330980735|gb|EGH78838.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 388

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDANVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|28869404|ref|NP_792023.1| succinyl-CoA synthase subunit beta [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213968181|ref|ZP_03396326.1| succinyl-CoA synthase, beta subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|237803497|ref|ZP_04591082.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|289624398|ref|ZP_06457352.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646688|ref|ZP_06478031.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298486519|ref|ZP_07004579.1| Succinyl-CoA ligase [ADP-forming] beta chain [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|301383814|ref|ZP_07232232.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059592|ref|ZP_07251133.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tomato K40]
 gi|302133381|ref|ZP_07259371.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302187417|ref|ZP_07264090.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae 642]
 gi|81731468|sp|Q883Z4|SUCC_PSESM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|28852645|gb|AAO55718.1| succinyl-CoA synthase, beta subunit [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927161|gb|EEB60711.1| succinyl-CoA synthase, beta subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|298158996|gb|EFI00057.1| Succinyl-CoA ligase [ADP-forming] beta chain [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320324899|gb|EFW80971.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329265|gb|EFW85262.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867448|gb|EGH02157.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875693|gb|EGH09842.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880833|gb|EGH14982.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330888158|gb|EGH20819.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330967007|gb|EGH67267.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330987445|gb|EGH85548.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010653|gb|EGH90709.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331018594|gb|EGH98650.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331025479|gb|EGI05535.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 388

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|88608589|ref|YP_506145.1| succinyl-CoA synthetase, beta subunit [Neorickettsia sennetsu str.
           Miyayama]
 gi|123492186|sp|Q2GEF1|SUCC_NEOSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|88600758|gb|ABD46226.1| succinyl-CoA synthetase, beta subunit [Neorickettsia sennetsu str.
           Miyayama]
          Length = 392

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           MNIHEYQAK +LR   VP   G ++          K+L    G ++ VK+QIHAGGRGK 
Sbjct: 1   MNIHEYQAKEILRVCGVPTPAGFLVQEDTETSEIAKSLARLGGKVFAVKAQIHAGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S++  I + +++LG  L+T QT P G +V  VY+E G  IL+E
Sbjct: 61  ----------GGVVICRSVEEAIDNTKKMLGMNLVTHQTSPAGQKVRKVYIEAGQSILKE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            YLS++VDR +  VA IAS +GGMDIEE+A+  P+KI K+ +D  IG++      +   L
Sbjct: 111 YYLSMVVDRENAKVAIIASEEGGMDIEEIARSTPEKIKKVFVDLSIGISDFHARKIGFEL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L          L   LY  F  +D S +EINPLI    G    LD+K++FDDNALYRH 
Sbjct: 171 GLSLAQIKQFTPLVKKLYALFVTRDASQVEINPLIANSKGEFIALDAKLNFDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D  ELRD+ EED +EIEA ++NL+YI ++G IGCMVNGAGLAMATMDIIK YG +PANFL
Sbjct: 231 DTLELRDLYEEDPKEIEAAKYNLNYIKMEGGIGCMVNGAGLAMATMDIIKYYGASPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+ ++V  AFKII+SD  V GIL+NIFGGIMRCD++ +GI++A K++ + +PLV+
Sbjct: 291 DVGGGANLEQVTNAFKIISSDKHVAGILVNIFGGIMRCDIIAEGIVAAAKDIGLTMPLVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G ++I  SGLN++TA +LDDAAQKIV
Sbjct: 351 RLSGTNYSAGIKIIEGSGLNIVTASELDDAAQKIV 385


>gi|153006562|ref|YP_001380887.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5]
 gi|152030135|gb|ABS27903.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 392

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/384 (50%), Positives = 260/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR + V V +G + ++   AE A   L  P+  +K+QIHAGGRGK    
Sbjct: 1   MRIHEYQAKELLRGFGVTVLRGGLATTPADAELAAAVLDTPICAIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +        +LG  L+T QTGP G RV  +YVE+G  I RELYL
Sbjct: 58  -------GGVKLARSPEEARDHAEAMLGMVLVTAQTGPAGQRVRKLYVEEGCRIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + VDR +G V  +AS +GG++IEEVAK +P++I +  +DPL G+ +     L   L L+
Sbjct: 111 GMTVDRETGRVTIMASREGGVEIEEVAKLHPERILRAEVDPLTGLQANQARGLAFGLGLR 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY+A+   D SL E+NPL++   G L  LD+K+  DDNAL+RH D+ 
Sbjct: 171 GEVASKFVKLAAGLYRAYVATDASLAEVNPLVVTAEGELVALDAKLELDDNALHRHPDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EE  RE+EAK+H+LSY+AL+G+I CMVNGAGLAM TMD+I+L GG PANFLDVG
Sbjct: 231 ALRDPDEEQQRELEAKEHDLSYVALEGDIACMVNGAGLAMGTMDMIQLAGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA + KVAAAFKI+ +D  V+ +L+NIFGGIM+CDV+ KGIL+A + V +++PLV+RLE
Sbjct: 291 GGASEAKVAAAFKILLADPGVRAVLVNIFGGIMKCDVIAKGILAAARHVNLSVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G  L+A+S L +I A DL
Sbjct: 351 GTNVELGKELLAQSDLEIIPADDL 374


>gi|229589340|ref|YP_002871459.1| succinyl-CoA synthetase subunit beta [Pseudomonas fluorescens
           SBW25]
 gi|259511788|sp|C3K6N0|SUCC_PSEFS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229361206|emb|CAY48070.1| succinyl-CoA synthetase beta chain [Pseudomonas fluorescens SBW25]
          Length = 388

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAEETPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|68171549|ref|ZP_00544927.1| Succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658279|ref|YP_507766.1| succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Arkansas]
 gi|123492843|sp|Q2GFL7|SUCC_EHRCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67999033|gb|EAM85706.1| Succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599736|gb|ABD45205.1| succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 387

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/398 (52%), Positives = 268/398 (67%), Gaps = 14/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+ V V KGVV+ S+   + A+  L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKHILSKFGVNVPKGVVVHSLGEVDGALSQLNSKVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +L    + I+ +LGSTLIT QT   G +V  VY+E+G +I +E Y+
Sbjct: 58  -------GGVVVSRTLDETKTSIKNMLGSTLITHQTSKDGQKVRKVYLEEGCNIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC--DMLE 178
           S +V+R  G V+ I ST+GG+DIEEVA   P+K+    I+P+ G       +LC    L 
Sbjct: 111 SAIVNRKQGQVSIIFSTEGGVDIEEVAATSPEKVIVCNINPVFGFQGFHGRNLCFDSNLS 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L    +I   D+   +YKA    D + +EINPL+   +G    LD+KI+FDDNALYRH D
Sbjct: 171 LDQTRKIS--DIAGKIYKAVLSTDANQIEINPLVETSSGEFIALDAKINFDDNALYRHPD 228

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLD
Sbjct: 229 IQELRDYDEEIKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLD 288

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA Q  V  AFKII +D  V GIL+NIFGGIMRCD++  GI++A++E+ IN+PLV+R
Sbjct: 289 VGGGASQKTVTEAFKIILADDKVNGILVNIFGGIMRCDIIANGIIAAIQEIGINVPLVVR 348

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L G N ++G +L+ +S LN+ITA DL +AA  IV+ V+
Sbjct: 349 LSGTNFELGKKLLDDSNLNIITANDLSEAAYNIVNIVR 386


>gi|152980238|ref|YP_001352080.1| succinyl-CoA synthetase beta chain [Janthinobacterium sp.
           Marseille]
 gi|189030248|sp|A6SUY3|SUCC_JANMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151280315|gb|ABR88725.1| succinyl-CoA synthetase beta chain [Janthinobacterium sp.
           Marseille]
          Length = 388

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/401 (51%), Positives = 279/401 (69%), Gaps = 18/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   KG    SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
            ++VDR S  VA +AS++GGMDIE VA+  P+KI K+ IDP+ G+    ++D+A    + 
Sbjct: 111 GMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPVKGLLDSEADDIARKIGVP 170

Query: 178 ELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           E   GQAR         LYKAF + D SL EINPLI+  + R+  LD+K +FD NA+YRH
Sbjct: 171 EGSIGQARA----FMQGLYKAFDETDASLAEINPLIVTGDDRIVALDAKFNFDSNAMYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +IQE+RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD+IKLYGG+PANF
Sbjct: 227 PEIQEMRDLDEEDPAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDVIKLYGGSPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKI+  +  +K IL+NIFGGIM+CDV+ +G+++A K+V + +PLV
Sbjct: 287 LDVGGGATTEKVTEAFKIMLKNPDIKAILVNIFGGIMKCDVIAQGVIAAAKQVDLTVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +R+ G N ++G +++AESGL +ITA ++ +AA+K+V+A +G
Sbjct: 347 VRMAGTNEELGKKILAESGLPIITANNMAEAAEKVVNAAQG 387


>gi|262198319|ref|YP_003269528.1| succinyl-CoA synthetase subunit beta [Haliangium ochraceum DSM
           14365]
 gi|262081666|gb|ACY17635.1| succinyl-CoA synthetase, beta subunit [Haliangium ochraceum DSM
           14365]
          Length = 390

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/400 (52%), Positives = 270/400 (67%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI----KTLPGPLYVVKSQIHAGGRGK 56
           M IHEYQ K LL++Y VPV  G+  +SV  A +A+    K     + VVK+QIHAGGRGK
Sbjct: 1   MKIHEYQGKELLKRYGVPVPFGIAATSVEDAIAAVPKVQKEAGTDVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G   ++  +++   +           I +I G  L+T QTGP G +V  + VE G DI  
Sbjct: 61  GGGVKVCKNAEAAEKA----------INDIYGMQLVTHQTGPEGKKVQRLLVEQGLDIAH 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL L +DR SG +  +AST+GGM+IEEVA+  P+KI K  I+P +G       SL   
Sbjct: 111 EYYLGLTLDRASGRITVMASTEGGMEIEEVAERTPEKILKATINPAVGWQDYQARSLGFA 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L  +           L KA+ + D SLLEINPL+   +GR+  LD+K++FDDNALYRH
Sbjct: 171 LGLDAKQVRALSSFLQALTKAYWEMDCSLLEINPLVTTNDGRVLALDAKVNFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+++ RD+SEED  E EAK+++LS+I LDGNIGCMVNGAGLAM+TMDIIK YGG PANF
Sbjct: 231 KDLEDWRDLSEEDPAETEAKKYDLSFIKLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV AAFKIITSD SVK I INIFGGIM+CD +  G+++AVKEV + +PLV
Sbjct: 291 LDVGGGATAEKVTAAFKIITSDPSVKSIFINIFGGIMKCDTIANGVVTAVKEVGLKVPLV 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NVD+G +++ ESGLN++ A D+ D A+K V   K
Sbjct: 351 VRLEGTNVDLGKKILEESGLNLVAAADMADGAKKAVEHAK 390


>gi|222053358|ref|YP_002535720.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
 gi|221562647|gb|ACM18619.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
          Length = 388

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/396 (53%), Positives = 265/396 (66%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MNIHEYQAKA+LR++ VPV  G V  +   A E A +   GP +VVK+QIHA        
Sbjct: 1   MNIHEYQAKAILREFGVPVPDGHVCYNGASAREWAKRLSEGP-WVVKAQIHA-------- 51

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  +   V +  R++LG  L T QTGP G  V  V VE+G +I  ELY
Sbjct: 52  --GGRGKGGGVKLARTADEVRNTARDMLGMILRTHQTGPEGKVVTRVLVENGCNIGTELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SLLVDR +  V  +AST+GGMDIEEVA   P+KIF+  I PL+G+T     +L   L L
Sbjct: 110 ISLLVDRATSKVTVMASTEGGMDIEEVAAKTPEKIFREAIAPLVGLTPFQCRNLAFSLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       L   LY+ F   D SLLEINPL++ K G L  LD+K  FDDNA++RH  I
Sbjct: 170 TGKLTNKAVKLLQGLYETFIGCDCSLLEINPLVVTKEGDLLCLDAKFGFDDNAVFRHPKI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++RD  EED  E+EA QH+LSY++L GNIGC+VNGAGLAMATMDIIK  GG PANFLDV
Sbjct: 230 GDMRDYDEEDPNEVEASQHDLSYVSLAGNIGCLVNGAGLAMATMDIIKHSGGNPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A K+V + +PLV+RL
Sbjct: 290 GGGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAAKQVSLKVPLVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NVD G  +++ SGLN+I A  + DAA KIV AV
Sbjct: 350 EGTNVDKGKEILSASGLNIIAADGMADAANKIVQAV 385


>gi|15892522|ref|NP_360236.1| succinyl-CoA synthetase subunit beta [Rickettsia conorii str.
           Malish 7]
 gi|21264041|sp|Q92I21|SUCC_RICCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|15619682|gb|AAL03137.1| succinyl-CoA synthetase beta chain [Rickettsia conorii str. Malish
           7]
          Length = 386

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGIDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L+RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDAKITFDDNGLFRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLAIIPAHDLADAANKIVEAIR 386


>gi|312959847|ref|ZP_07774363.1| Succinyl-CoA ligase subunit beta [Pseudomonas fluorescens WH6]
 gi|311286013|gb|EFQ64578.1| Succinyl-CoA ligase subunit beta [Pseudomonas fluorescens WH6]
          Length = 404

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 17  MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 73

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 74  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A + P+KI K  IDPL+G        L   L L+
Sbjct: 127 GAVVDRSSRRIVFMASTEGGVDIEKIAHETPEKILKATIDPLVGAQPFQGRELAFQLGLE 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 187 GKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 247 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 307 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 366

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 367 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 403


>gi|300692431|ref|YP_003753426.1| succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum PSI07]
 gi|299079491|emb|CBJ52167.1| Succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum PSI07]
          Length = 388

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/386 (51%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR S  VA +AS++GGMDIEEVA   P+KI  L++DP  G+   D   +   + + 
Sbjct: 111 SMVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPEFGLQDADADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF D D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWDTDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAASKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMEE 376


>gi|190149798|ref|YP_001968323.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303250244|ref|ZP_07336444.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252009|ref|ZP_07533909.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307263118|ref|ZP_07544739.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|226733923|sp|B3GX29|SUCC_ACTP7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189914929|gb|ACE61181.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302650860|gb|EFL81016.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860478|gb|EFM92491.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306871480|gb|EFN03203.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 388

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A S L +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSSLRLIAANTLTQAAQLAVKAAEG 387


>gi|261492658|ref|ZP_05989211.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261494593|ref|ZP_05991074.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261309705|gb|EEY10927.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311817|gb|EEY12967.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 385

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/394 (49%), Positives = 270/394 (68%), Gaps = 11/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK + ++Y +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +Y+E+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETCNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AS+ GGM+IEEVA+  P+ I K +IDPL G        L   L L+
Sbjct: 111 GAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L   F +KD++LLE+NPL+I K G+L  LD+K+S D NALYRH +++
Sbjct: 171 GDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL+D S++D RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAFK+I SD +VK +L+NIFGGI+RCD++  G+++AV EV +N+P+++RLE
Sbjct: 291 GGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIAAVNEV-VNVPVIVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N   G  ++A SGL+++ A  L  AA+  V +
Sbjct: 350 GTNAAQGREILANSGLSILAASSLKQAAELAVKS 383


>gi|229586711|ref|YP_002845212.1| succinyl-CoA synthetase subunit beta [Rickettsia africae ESF-5]
 gi|259511790|sp|C3PNF9|SUCC_RICAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|228021761|gb|ACP53469.1| Succinyl-CoA synthetase beta chain [Rickettsia africae ESF-5]
          Length = 386

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L+RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLAIIPAHDLADAANKIVEAIR 386


>gi|258545093|ref|ZP_05705327.1| succinyl-CoA ligase [ADP-forming] subunit beta [Cardiobacterium
           hominis ATCC 15826]
 gi|258519670|gb|EEV88529.1| succinyl-CoA ligase [ADP-forming] subunit beta [Cardiobacterium
           hominis ATCC 15826]
          Length = 386

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/386 (50%), Positives = 267/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL R Y V   + ++  +   A +A + L G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFRAYGVDTPRSILAKNADEAVAAAQELGGSVWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   +++G+TL TKQTG  G  +N V +E+G DI  ELY+
Sbjct: 58  -------GGVKVAKSLDEVRAHASQMIGNTLKTKQTGEVGLPINMVLIEEGLDIADELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V+FIAS +GGMDIEEVA+  P+KI  + +DP  G        L   + L 
Sbjct: 111 SAVVDRASRRVSFIASAEGGMDIEEVAEKSPEKIHSVGVDPSAGYFPYVGRRLGFAMGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L   LY  F DKD+S++EINPLI+  +G+L  LD+KI  DDNALYRH D+ 
Sbjct: 171 KKQVGQLATLLQGLYNLFTDKDLSMVEINPLIVTGDGKLLALDAKIGVDDNALYRHKDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD ++ED+RE +A++  L+Y+ALDGNIGCMVNGAGLAMATMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPTQEDARENQAQELELNYVALDGNIGCMVNGAGLAMATMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+I +   VK IL+NIFGGI+RCD++ +GI++A KE+ + +P++ RL+
Sbjct: 291 GGATAERVKEAFKLILTSPEVKSILVNIFGGIVRCDLIAEGIINAAKEIDLKVPVIARLQ 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV++G +++ ESGL + +A DL D
Sbjct: 351 GTNVELGRKMLDESGLGITSADDLTD 376


>gi|307545699|ref|YP_003898178.1| succinyl-CoA synthetase subunit beta [Halomonas elongata DSM 2581]
 gi|307217723|emb|CBV42993.1| succinyl-CoA synthetase, subunit beta [Halomonas elongata DSM 2581]
          Length = 388

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/397 (50%), Positives = 272/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+KG  + +   A  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFADYGLPVSKGFAVDTPEEAAEACKKIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V  + VE+  DI  ELYL
Sbjct: 58  -------GGVKLVESPEEASAFAEQWLGKNLVTFQTDEKGQPVAKILVENCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTQRVVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQARELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F DKD++LLEINPL+I + G L  LD+K++ D NALYRH D+Q
Sbjct: 171 GDQVKQFTKIFLGLSKLFHDKDLALLEINPLVITEEGNLHCLDAKVNLDGNALYRHPDLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE +A + +L+Y+AL+GNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 AMRDPSQEDEREADAAKWDLNYVALEGNIGCMVNGAGLAMGTMDIIKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD+SVK +L+NIFGGI+RCD++ +GI+ AV++V +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTSVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G   +A SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAEKLASSGLNIIAATSLTDAAQQVVKAAEG 387


>gi|34580486|ref|ZP_00141966.1| succinyl-CoA synthetase beta chain [Rickettsia sibirica 246]
 gi|28261871|gb|EAA25375.1| succinyl-CoA synthetase beta chain [Rickettsia sibirica 246]
          Length = 386

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  + FIAST+GG+DIE VA+  P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRLASCITFIASTEGGVDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L+RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLAIIPAHDLADAANKIVEAIR 386


>gi|292572047|gb|ADE29962.1| Succinyl-CoA synthetase beta chain [Rickettsia prowazekii Rp22]
          Length = 386

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YV+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTKVYVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVAKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRIYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLII   G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDATQIEINPLIINSYGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ S L +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSDLKIIPAHDLADAANKIVEAIR 386


>gi|253996049|ref|YP_003048113.1| succinyl-CoA synthetase subunit beta [Methylotenera mobilis JLW8]
 gi|253982728|gb|ACT47586.1| succinyl-CoA synthetase, beta subunit [Methylotenera mobilis JLW8]
          Length = 387

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/395 (52%), Positives = 267/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+KY +PV +G V++           +    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKTLLQKYGIPVPRGQVVAVAKETVGVTTEIASDGWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S     +   E+LG TL+T Q  P G  VN V VE+   I RELYL
Sbjct: 58  -------GGVKVVKSAAEAQNVAGELLGKTLVTYQNAPDGQPVNQVLVEETLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT   V  +AS  GGMDIEE+A   P+KI + + DPL G+      +L   L+L 
Sbjct: 111 SMLVDRTLERVVVVASVAGGMDIEEIAHTSPEKILQEVCDPLNGLVDFQARNLAFKLDLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F D D++LLEINPL++  +G+L  LD K+S DDNALYR   + 
Sbjct: 171 GDQIGAFTKLLKGLYRLFKDNDLALLEINPLVVTTDGKLYALDCKMSVDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+EDS+E  A    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 EQRDWSQEDSKEAVAHHAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGMPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AFKII +DS+VK IL+NIFGGIMRCD++ +GI++AV+EV + IP+++RLE
Sbjct: 291 GGATAETVAKAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVREVGMQIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++  SGLN+I+A  L DAAQ+ V AV
Sbjct: 351 GTNVDLGKKMLQTSGLNIISAEGLTDAAQQAVKAV 385


>gi|77457844|ref|YP_347349.1| succinyl-CoA synthetase subunit beta [Pseudomonas fluorescens
           Pf0-1]
 gi|123605427|sp|Q3KFU6|SUCC_PSEPF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77381847|gb|ABA73360.1| succinyl-CoA synthetase beta chain [Pseudomonas fluorescens Pf0-1]
          Length = 388

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+ G  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSTGFAVDTPEAAAEACDKIGGNEWVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 57  ------SGGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|222151080|ref|YP_002560234.1| succinyl-CoA synthetase beta subunit [Macrococcus caseolyticus
           JCSC5402]
 gi|254778443|sp|B9EBC7|SUCC_MACCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|222120203|dbj|BAH17538.1| succinyl-CoA synthetase beta subunit [Macrococcus caseolyticus
           JCSC5402]
          Length = 389

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V  G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPNGSVAYTPEEAVEVAKGLKEGVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V S  +E+LG  L+T QTGP G  V  + VE+G DI +E YL
Sbjct: 58  -------GGVKIAKSLDEVESYAKELLGKVLVTHQTGPEGKEVKRLLVEEGCDIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  + S +GG +IEEVA+  P+KIFK +IDP++G+       L   + + 
Sbjct: 111 GFVLDRATDSVVLMGSEEGGTEIEEVAEATPEKIFKEVIDPVVGLMPYQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++      +   LY  F  KD S++EINPL+   +G +  LD+KI+FD NAL+R  D+ 
Sbjct: 171 KESVNKAVKIMLGLYDVFMKKDASIIEINPLVTTGDGEVLALDAKINFDANALFRQKDVM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  V+GI +NIFGGIM+CDV+ +G+++A KE+++ IPLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDEKVEGIFVNIFGGIMKCDVIAEGVVAAAKELELTIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  ++  SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVDQGKEILGNSGLAITPASTMAEGAQKIVELVK 386


>gi|330959053|gb|EGH59313.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 388

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   +I +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTNIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKDDGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|113866575|ref|YP_725064.1| succinyl-CoA synthetase subunit beta [Ralstonia eutropha H16]
 gi|123134400|sp|Q0KE75|SUCC_RALEH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|113525351|emb|CAJ91696.1| Succinyl-CoA synthetase beta chain [Ralstonia eutropha H16]
          Length = 388

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/386 (51%), Positives = 271/386 (70%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKTYASNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA   P+KI  L+I+P +G+T  +   +   + + 
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHSPEKIHTLIIEPSVGLTDAEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DTSVAQARQALQGLYKAFYETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++ S+ +V+ IL+NIFGGIMRCDV+ +G++SA K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLSNKNVQAILVNIFGGIMRCDVIAEGVISASKAVHLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADTMEE 376


>gi|302879759|ref|YP_003848323.1| succinyl-CoA synthetase, beta subunit [Gallionella
           capsiferriformans ES-2]
 gi|302582548|gb|ADL56559.1| succinyl-CoA synthetase, beta subunit [Gallionella
           capsiferriformans ES-2]
          Length = 388

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/397 (50%), Positives = 276/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VP  +GV   SV  A +A + L G L+VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPTPRGVACFSVDEAVAAAEVLGGGLWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTG  G  V  + VE+GA I RE YL
Sbjct: 52  -GGRGKGGGVKVARSLDEVRQAAGQILGMHLVTHQTGADGQVVRRLLVEEGAQIAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR S  VA +AS++GGM++EEVAK+ P+KI  L IDP++G+   D A +  ++ + 
Sbjct: 111 GMVVDRDSQRVALLASSEGGMEVEEVAKNTPEKIHTLRIDPVLGLIDTDAADVARLIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LY+AF +K+  L EINPL++  +GR+  LD+K +FD NAL+RH +I 
Sbjct: 171 EDSIAGAVVVLQGLYRAFVEKEAMLAEINPLVLTADGRVIALDAKFNFDSNALFRHPEIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +LSYI+LDG+I C+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 TYRDLDEEDPAEIEASKFDLSYISLDGDIACLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK++  + ++K IL+NIFGGIM+CDV+ +GI++AV+EV +++PLV+RLE
Sbjct: 291 GGATREKVTEAFKLMLKNPNLKAILVNIFGGIMKCDVIAEGIVAAVREVHLSVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G +++A+SGL +I+  D+ DAAQK+V A +G
Sbjct: 351 GTNVDLGKKILADSGLPIISGADMADAAQKVVAAARG 387


>gi|56476116|ref|YP_157705.1| succinyl-CoA synthetase subunit beta [Aromatoleum aromaticum EbN1]
 gi|81358330|sp|Q5P7A7|SUCC_AZOSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56312159|emb|CAI06804.1| Succinyl-CoA synthetase, beta chain [Aromatoleum aromaticum EbN1]
          Length = 386

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLRKY V   +G    SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRKYGVVTPRGFHTVSVDGAVKAAEELGGKIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG  L+T QTGP G +V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQHASDILGMQLVTHQTGPEGQKVRNLLIEEGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA   P+KI K  +DPL+G+T     +L   + + 
Sbjct: 111 AALTDRATQKVAIMASSEGGMDIEEVAHSTPEKILKEFVDPLVGLTDAQAENLARGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D    LY  + + D SL EINPLI+  NG ++ LD+K +FD NALYRH +I 
Sbjct: 171 EASVAKAVDALKRLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD  EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 DFRDFDEEDADEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A KEV +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVVAAAKEVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKILAESGLPIIAADTMAEAATKIVAAVK 386


>gi|330811084|ref|YP_004355546.1| succinate--CoA ligase (ADP-forming) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327379192|gb|AEA70542.1| Succinate--CoA ligase (ADP-forming) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 388

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+ G  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSTGYAVDTPEAAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|52425407|ref|YP_088544.1| succinyl-CoA synthetase subunit beta [Mannheimia succiniciproducens
           MBEL55E]
 gi|81386979|sp|Q65SV1|SUCC_MANSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52307459|gb|AAU37959.1| SucC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 388

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 274/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV++G    S+  A  A+K L G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYGLPVSEGCACQSLEEAIQAVKKLGGGQWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V S   + LG  L+T QT   G  VN +Y+E  A++ +ELYL
Sbjct: 58  -------GGVKLVKSEEEVRSFFEKFLGQRLVTFQTDAKGQPVNAIYMEACANVKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+ ST+GG++IEEVA+  P  + K+ IDPL+G        L   L LQ
Sbjct: 111 GAVLDRSSQRIVFMVSTEGGVNIEEVAEKTPHLLHKMPIDPLVGAMPYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SLLEINPL+I+ N +L  LD+KI  D NALYR  ++ 
Sbjct: 171 GKQIQQFAQIFCQLGKMFVEKDLSLLEINPLVILDNDQLHCLDAKIVVDGNALYRQPELN 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED+RE  A+Q +L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMRDPSQEDAREAAAEQWHLNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD SVK IL+NIFGGI+RCD++ +GI++AV EV +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDQSVKAILVNIFGGIVRCDLIAEGIVAAVNEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A+SGLN+I A  L DAA ++V+A +G
Sbjct: 351 GNNAPLGREILAQSGLNIIAATSLTDAAVQVVNAAEG 387


>gi|71736715|ref|YP_274207.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|123636987|sp|Q48K68|SUCC_PSE14 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71557268|gb|AAZ36479.1| succinyl-CoA synthetase, beta subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 388

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE    I +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTHIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|17545273|ref|NP_518675.1| succinyl-CoA synthetase subunit beta [Ralstonia solanacearum
           GMI1000]
 gi|21264036|sp|Q8Y1Y3|SUCC_RALSO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|17427564|emb|CAD14082.1| probable succinyl-coa synthetase beta chain (scs-beta) protein
           [Ralstonia solanacearum GMI1000]
          Length = 388

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/386 (50%), Positives = 269/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA   P+KI  L++DP IG+   +   +   + + 
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQIGLQDAEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAASKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMEE 376


>gi|70729111|ref|YP_258847.1| succinyl-CoA synthetase subunit beta [Pseudomonas fluorescens Pf-5]
 gi|123657011|sp|Q4KFY6|SUCC_PSEF5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|68343410|gb|AAY91016.1| succinyl-CoA synthase, beta subunit [Pseudomonas fluorescens Pf-5]
          Length = 388

 Score =  385 bits (988), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|15604298|ref|NP_220814.1| succinyl-CoA synthetase subunit beta [Rickettsia prowazekii str.
           Madrid E]
 gi|3915040|sp|O05966|SUCC_RICPR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|2073500|emb|CAA72445.1| succinyl-CoA synthetase beta-subunit [Rickettsia prowazekii]
 gi|3860990|emb|CAA14890.1| SUCCINYL-COA SYNTHETASE BETA CHAIN (sucC) [Rickettsia prowazekii]
          Length = 386

 Score =  385 bits (988), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YV+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTKVYVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVAKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRIYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   +Y AF + D + +EINPLII   G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKAVYNAFIETDATQIEINPLIINSYGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ S L +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSDLKIIPAHDLADAANKIVEAIR 386


>gi|255318878|ref|ZP_05360104.1| succinyl-CoA synthetase beta chain [Acinetobacter radioresistens
           SK82]
 gi|262378866|ref|ZP_06072023.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           radioresistens SH164]
 gi|255304134|gb|EET83325.1| succinyl-CoA synthetase beta chain [Acinetobacter radioresistens
           SK82]
 gi|262300151|gb|EEY88063.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           radioresistens SH164]
          Length = 388

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 276/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGILATNADEAVAAFEQLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        I+G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVQVVKSKEEAADYTSRIIGTRLVTYQTDANGQPVNSVLVCEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAEETPEKIIKVTVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +         L    Y AF + D +L EINPL + +NG +  +D+K+  D NALYR  ++
Sbjct: 171 KDGQINQFVKLMTGAYHAFVENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPEV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 SALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +DSSV+ +LINIFGGI+RCD++ + I++AV+EV + IP+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADSSVQAVLINIFGGIVRCDMIAEAIIAAVQEVNVTIPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLTLISAQGLADAAEKVVAAVK 387


>gi|145590011|ref|YP_001156608.1| succinyl-CoA synthetase subunit beta [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|189081767|sp|A4SZY0|SUCC_POLSQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145048417|gb|ABP35044.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 389

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/386 (51%), Positives = 270/386 (69%), Gaps = 20/386 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LLR++NVPV  G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L T QTGP G +VN + +EDGADI +E Y 
Sbjct: 52  -GGRGKGGGVKLARSMDEVKKYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +     +AS++GGMDIEEVA+ +P+KI K+ +DP++G+T  D    CD++  +
Sbjct: 111 SIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDAD----CDIVA-K 165

Query: 181 G----QARID-GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           G    +A I    D+F NLYK + D D SL+EINPLI+  NG+++ LD+K +FD NAL+R
Sbjct: 166 GIGVPEASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDAKFNFDPNALFR 225

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H +I   RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PAN
Sbjct: 226 HPEIVAYRDIDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPAN 285

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA  +KV  AFKI+  + SV+ IL+NIFGGIMRCDV+  G+++A K V + +PL
Sbjct: 286 FLDVGGGATAEKVTEAFKIMLKNKSVEAILVNIFGGIMRCDVIADGVVTACKAVNLTVPL 345

Query: 356 VMRLEGANVDIGNRLIAESGLNVITA 381
           V+R++G N ++G +++A+SGL +I+A
Sbjct: 346 VVRMKGTNEELGKKILADSGLPIISA 371


>gi|237746927|ref|ZP_04577407.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           HOxBLS]
 gi|229378278|gb|EEO28369.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           HOxBLS]
          Length = 388

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/400 (52%), Positives = 273/400 (68%), Gaps = 16/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G    +V  A  A + L G L+VVK+QIHA         
Sbjct: 1   MNIHEYQGKQILRKYGVTTPRGFPCFTVDEAVEAAEKLGGNLWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     EILG TL+T QTGP G  V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSIDEVRKYATEILGMTLVTHQTGPEGRVVKRLLIEEGADIKKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
            ++VDR +  VA +AS++GGM+IE+VA+D P+ I K+ IDP  G+T    ED+A    M 
Sbjct: 111 GMVVDRATQRVALMASSEGGMNIEDVARDTPELIHKVFIDPASGLTDAEGEDIARKIGMP 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           E    A  +       LYKAF + D SL EINPL++  + R+  LD+K +FD NALYR  
Sbjct: 171 E---AAVKETCKFMQGLYKAFVETDASLAEINPLVLTGDNRVIALDAKFNFDSNALYRQP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +IQ +RD+ EE+  EI+A + +L+YI+LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL
Sbjct: 228 EIQAMRDLDEENPDEIQASKFDLTYISLDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  +KV  AFKI+ S+  VK IL+NIFGGIMRCDV+ +GI++A K+V++ +PL++
Sbjct: 288 DVGGGATTEKVTEAFKIMLSNPDVKAILVNIFGGIMRCDVIAEGIVAAAKQVELKVPLIV 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NVD G  ++A+SGL +I+A  + DAA K V+A KG
Sbjct: 348 RLEGTNVDQGKEILAKSGLPIISASGMADAALKAVNAAKG 387


>gi|51473622|ref|YP_067379.1| succinyl-CoA synthetase subunit beta [Rickettsia typhi str.
           Wilmington]
 gi|77417470|sp|Q68WU5|SUCC_RICTY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|51459934|gb|AAU03897.1| Succinate thiokinase [Rickettsia typhi str. Wilmington]
          Length = 386

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++       AI  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINEAIDKLNTKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNHLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYGLGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLII     L  LD+KI+FDDN L++H +I 
Sbjct: 171 DSQAKQMKEIVKSVYNAFIETDATQIEINPLIINSYKNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A +++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAARDIGITVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ S L +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSNLKIIPAHDLADAANKIVEAIR 386


>gi|641970|gb|AAA61787.1| succinyl-CoA synthetase beta chain [Coxiella burnetii]
          Length = 386

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 275/396 (69%), Gaps = 15/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA    +KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVA----EKILKVTIDPAIGLQPFQCRQLFFGLGLQ 166

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              ++    D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 167 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 226

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 227 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 286

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 287 GGTATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 346

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 347 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 382


>gi|326319398|ref|YP_004237070.1| succinyl-CoA synthetase subunit beta [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323376234|gb|ADX48503.1| succinyl-CoA synthetase, beta subunit [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 386

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     +ILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKKLAGDILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P KI   +IDP+ G+T+E    +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPDKIVTEMIDPIAGITTEQSKKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     D+F  +YK + + D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDIFAKIYKCYMETDASLVEINPLNCDSKGNLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AFRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|152990585|ref|YP_001356307.1| succinyl-CoA synthase, beta subunit [Nitratiruptor sp. SB155-2]
 gi|189081759|sp|A6Q391|SUCC_NITSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151422446|dbj|BAF69950.1| succinyl-CoA synthase, beta subunit [Nitratiruptor sp. SB155-2]
          Length = 390

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/398 (52%), Positives = 268/398 (67%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + R+Y VPV +G V  +   A    + L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIFREYGVPVPRGEVAFTGPEAREVAQRLGGDLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     E+LG TL+T QTGP G +V  VYVE+GADI +E YL
Sbjct: 58  -------GGVKLARSLDEVEKIAEEMLGMTLVTHQTGPEGKKVEKVYVEEGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR+S M   +AST+GGM+IEEVA   P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMVLDRSSEMPVMMASTEGGMEIEEVAAKTPEKIIKVAIDPTIGFQGFHGRKLAFGLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYK + DKD +L+EINPLI   +GR   LD+K+ FDDNALY+H DI 
Sbjct: 171 KEEIRPFIQFAEALYKVYMDKDANLIEINPLIKTGDGRFLALDAKMGFDDNALYKHPDIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+SEED  E+EA ++ LSY+ LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLSEEDPVEVEAAKYGLSYVNLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D VA  F++I SD +VK I +NIFGGI+RCD +  GIL A ++V++N+P+V+RL+
Sbjct: 291 GGANPDTVAKGFELILSDENVKSIFVNIFGGIVRCDRIANGILQATQQVEVNVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N +   +++  + + N+I A DL D A+K V A KG
Sbjct: 351 GTNAEEAAQILKNANIKNIIPATDLADGARKAVAAAKG 388


>gi|21673219|ref|NP_661284.1| succinyl-CoA synthetase, beta subunit [Chlorobium tepidum TLS]
 gi|25453283|sp|Q8KFE7|SUCC_CHLTE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21646302|gb|AAM71626.1| succinyl-CoA synthetase, beta subunit [Chlorobium tepidum TLS]
          Length = 392

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/399 (48%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+++ V V KG+V  S   A+ A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKGILKQFGVAVPKGIVAFSAEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S + V    +++LG+TL+T QTGP G  V  + +E+G +I +
Sbjct: 61  A----------GGVKLAKSPEEVFEIAQKMLGATLVTHQTGPEGKEVRRLLIEEGMNIDK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DRT+     + ST+GGM+IE+VA++ P+K+ K+ +DP+ G+           
Sbjct: 111 EFYLGITLDRTTSSNVLMVSTEGGMEIEKVAEETPEKLLKIHVDPVYGLQGFQARKAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L LQG+   +G      LY A+   D SL EINPL+I K GR+  LD+KI+FDDNALYRH
Sbjct: 171 LGLQGEQFRNGVKFIEALYNAYTTIDASLAEINPLVITKEGRVLALDAKINFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  +LRD++EED  E EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 SDFHDLRDITEEDPLEYEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLSGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII  D +VK IL+NIFGGI+RCD +  GI+ A K + + +P++
Sbjct: 291 LDVGGGASSKTVEEGFKIILGDKNVKAILVNIFGGIVRCDRVAGGIIEAAKNIGLKVPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N     +++ ESGLN+I+A  L DAA+K+  A+
Sbjct: 351 VRLEGTNATEAQKMLDESGLNLISAKGLRDAAEKVQKAL 389


>gi|254514204|ref|ZP_05126265.1| succinyl-CoA synthetase beta chain [gamma proteobacterium NOR5-3]
 gi|219676447|gb|EED32812.1| succinyl-CoA synthetase beta chain [gamma proteobacterium NOR5-3]
          Length = 389

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + S  AA  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKRLFAEYGLPVSKGHAVDSPQAAVEAADLIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +       LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKDEIADFASHWLGKNLVTYQTDANGQPVSKILVETCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI + +IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILRAVIDPLTGAQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++L+EINPL+I   G L  LD+KI  D NALYR  D++
Sbjct: 171 GEQIKQFVKIFLGLAKMFQEKDLALIEINPLVITTEGNLHCLDAKIGVDGNALYRQSDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 DMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD  VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDKVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVAVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGRKVLADSGLNIIAATSLTDAAQQAVKAAGG 387


>gi|146307523|ref|YP_001187988.1| succinyl-CoA synthetase subunit beta [Pseudomonas mendocina ymp]
 gi|189081770|sp|A4XV90|SUCC_PSEMY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145575724|gb|ABP85256.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pseudomonas
           mendocina ymp]
          Length = 388

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACEKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAANWLGKRLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPYQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GDQVKQFTHIFVGLAKLFQDYDLALLEVNPLVIKADGNLHCLDAKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLADSGLNIIAATSLTDAAQQVVKAAEG 387


>gi|330503177|ref|YP_004380046.1| succinyl-CoA synthetase subunit beta [Pseudomonas mendocina NK-01]
 gi|328917463|gb|AEB58294.1| succinyl-CoA synthetase subunit beta [Pseudomonas mendocina NK-01]
          Length = 388

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACEKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAANWLGKRLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  +DPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATVDPLVGAQPYQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GDQVKQFTHIFVGLAKLFQDYDLALLEVNPLVIKADGNLHCLDAKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLADSGLNIIAATSLTDAAQQVVKAAEG 387


>gi|194098453|ref|YP_002001512.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998851|ref|ZP_04718775.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|240112777|ref|ZP_04727267.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae MS11]
 gi|254493637|ref|ZP_05106808.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268594694|ref|ZP_06128861.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268598845|ref|ZP_06133012.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae MS11]
 gi|226734965|sp|B4RL77|SUCC_NEIG2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|193933743|gb|ACF29567.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512677|gb|EEH62022.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268548083|gb|EEZ43501.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268582976|gb|EEZ47652.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae MS11]
 gi|317164139|gb|ADV07680.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 388

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|241760332|ref|ZP_04758427.1| succinyl-CoA synthetase beta chain [Neisseria flavescens SK114]
 gi|241319210|gb|EER55688.1| succinyl-CoA synthetase beta chain [Neisseria flavescens SK114]
          Length = 388

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGDLACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|188591290|ref|YP_001795890.1| succinyl-CoA synthetase subunit beta [Cupriavidus taiwanensis LMG
           19424]
 gi|226734941|sp|B2AHC1|SUCC_CUPTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|170938184|emb|CAP63170.1| succinyl-CoA synthetase, beta subunit [Cupriavidus taiwanensis LMG
           19424]
          Length = 388

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/386 (50%), Positives = 269/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEALKAAEQLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +A +AS++GGMDIEEVA   P+KI  L+I+P  G+T  D   +   + + 
Sbjct: 111 SLVVDRVSQKIALMASSEGGMDIEEVAAHTPEKIHTLIIEPSTGLTDADADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVAQARQALQGLYKAFYETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +V+ IL+NIFGGIMRCDV+ +G++SA K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNVQAILVNIFGGIMRCDVIAEGVISASKAVSLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A+SGL +I+A  +++
Sbjct: 351 GTNEELGRKMLADSGLPIISADTMEE 376


>gi|296314776|ref|ZP_06864717.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           polysaccharea ATCC 43768]
 gi|296838419|gb|EFH22357.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           polysaccharea ATCC 43768]
          Length = 388

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|83746094|ref|ZP_00943149.1| Succinyl-CoA synthetase beta chain [Ralstonia solanacearum UW551]
 gi|207728009|ref|YP_002256403.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum MolK2]
 gi|207742410|ref|YP_002258802.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum IPO1609]
 gi|300705083|ref|YP_003746686.1| succinate-CoA ligase (ADP-forming) subunit beta [Ralstonia
           solanacearum CFBP2957]
 gi|83727277|gb|EAP74400.1| Succinyl-CoA synthetase beta chain [Ralstonia solanacearum UW551]
 gi|206591253|emb|CAQ56865.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum MolK2]
 gi|206593800|emb|CAQ60727.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum IPO1609]
 gi|299072747|emb|CBJ44100.1| Succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum CFBP2957]
          Length = 388

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/381 (50%), Positives = 266/381 (69%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR S  VA +AS++GGMDIEEVA   P+KI  L++DP  G+   +   +   + + 
Sbjct: 111 SMVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQAGLQDAEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + ++K IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNLKAILVNIFGGIMRCDVIAEGVIAASKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N D+G +++A+SGL +I A
Sbjct: 351 GTNEDLGKKMLADSGLPIIAA 371


>gi|322514063|ref|ZP_08067134.1| succinyl-CoA ligase subunit beta [Actinobacillus ureae ATCC 25976]
 gi|322120080|gb|EFX92051.1| succinyl-CoA ligase subunit beta [Actinobacillus ureae ATCC 25976]
          Length = 388

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+ G+  ++ H A +AI+ L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFSQYQLPVSHGIACTNTHEALAAIQQLNGDIWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     +  G  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRNDADVREFCDKWFGQHLVTFQTDAHGQPVNTIYIEETCQIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             + DR+S  + F+AS  GGM+IE+VA+  P+ I K+ IDPL G  +     L   L L 
Sbjct: 111 GAVADRSSQKIVFMASCAGGMNIEDVAQQTPELIHKVTIDPLTGAQAFQGRELAFQLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F +KD++L+E+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFTHIFVQLANLFIEKDLALVEVNPLVLTKQGQLLCLDAKMVVDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 VLQDPSQEDPREAEAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKLILSDRNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVSLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +L+A SGL++I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGCQLLANSGLSLIAATTLTQAAQFTVTAAQG 387


>gi|42525134|ref|NP_970514.1| succinyl-CoA synthetase beta chain [Bdellovibrio bacteriovorus
           HD100]
 gi|81615897|sp|Q6MGW1|SUCC_BDEBA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|39577345|emb|CAE81168.1| succinyl-CoA synthetase beta chain [Bdellovibrio bacteriovorus
           HD100]
          Length = 387

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 273/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRK+ V   KG +  S   A +A K + G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKEVLRKFGVATLKGKLAHSPEEAVAAAKEIGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V    ++++G TL+T QTGP G  V  V++E G +I +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVSEFTKKMIGMTLVTHQTGPEGKVVQKVFIEQGCNIAKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L+DR +G  A +AS++GGMDIEEVA+  P  I K+ IDP +G+       L   + ++
Sbjct: 111 ACLIDRATGRAAMMASSEGGMDIEEVAEHNPDAIKKVDIDPTVGLMPFQARELAFQIGME 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                     F  LY AF   D S+ EINPL++ K G +  LD+K++FD N+L+RH DI 
Sbjct: 171 PAIVNKAVKFFAGLYNAFVATDCSIAEINPLVVTKEGDVLCLDAKMNFDSNSLFRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD++EE+  EIEA + +L++I LDGNIGC+VNGAGLAMAT+DIIKL+G  PANFLDVG
Sbjct: 231 EMRDLNEEEPSEIEASKFDLAFIKLDGNIGCLVNGAGLAMATLDIIKLHGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV  AFKII  D +VKGIL+NIFGGIM+CD++ +G+++A KE+ + +PLV+RLE
Sbjct: 291 GGANKEKVTEAFKIILKDKNVKGILVNIFGGIMKCDIIAEGVIAASKELGLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGLN+  A +L DAA+KIV A+KG
Sbjct: 351 GTNVELGKKMLKESGLNITPADNLTDAAKKIVAAIKG 387


>gi|94309414|ref|YP_582624.1| succinyl-CoA synthetase subunit beta [Cupriavidus metallidurans
           CH34]
 gi|93353266|gb|ABF07355.1| succinyl-CoA synthetase, beta subunit [Cupriavidus metallidurans
           CH34]
          Length = 388

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/386 (50%), Positives = 269/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAEQLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDEVKTYATNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA   P+KI  L+I+P  G+   D   +   + + 
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIIEPSEGLKDSDADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF D D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWDTDASLAEINPLILTGDGKVVALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +V+ IL+NIFGGIMRCDV+ +G+++A K V++ +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNVQAILVNIFGGIMRCDVIAEGVITASKAVQLGVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A+SGL +I+A  +++
Sbjct: 351 GTNEELGRKMLADSGLPIISADTMEE 376


>gi|171921150|gb|ACB59226.1| succinyl-CoA synthetase beta chain [Tetrathiobacter
           mimigardefordensis]
          Length = 386

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+K+ V V +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKKFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L+T QTGP G +VN + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLAKSIDEVRQLSSEILGMQLVTHQTGPEGQKVNRLLIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR+S  V  +AS++GGMD+EEVA+  P+KI K+ +DP  G T ++   L   + + 
Sbjct: 111 GIVTDRSSQRVCVMASSEGGMDVEEVAEKTPEKILKVFVDPAKGFTDDEARELARGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +       F  LY+A+ D D SL EINPLI+  +G +  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVEKAAVEFQKLYQAYWDTDSSLAEINPLILTGSGDIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 EYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKEVKAILVNIFGGIMRCDVIAEGVIAACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA K+V AVK
Sbjct: 351 GTNEEMGKKMLAESGLPIISADTMAEAATKVVAAVK 386


>gi|333010156|gb|EGK29591.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-272]
 gi|333021111|gb|EGK40368.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-227]
          Length = 388

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|134093621|ref|YP_001098696.1| succinyl-CoA synthetase subunit beta [Herminiimonas arsenicoxydans]
 gi|189030208|sp|A4G230|SUCC_HERAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|133737524|emb|CAL60567.1| succinyl-CoA synthetase, beta subunit [Herminiimonas
           arsenicoxydans]
          Length = 388

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/403 (50%), Positives = 278/403 (68%), Gaps = 22/403 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   KG    SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
            ++VDR S  VA +AS++GGMDIE VA+  P+KI K+ IDP  G+    ++D+A    + 
Sbjct: 111 GMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPFKGLLDSEADDIARKIGVP 170

Query: 178 E---LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           E    Q +A + G      LYKAF + D SL EINPLI+  + R+  LD+K +FD NALY
Sbjct: 171 EGSIPQARAFMQG------LYKAFDETDASLAEINPLIVTGDDRIVALDAKFNFDSNALY 224

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           RH +I E+RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD+IKLYGG+PA
Sbjct: 225 RHPEIVEMRDLDEEDPAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDVIKLYGGSPA 284

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA  +KV  AFKI+  +  +K IL+NIFGGIM+CDV+ +G+++A K+V + +P
Sbjct: 285 NFLDVGGGATTEKVTEAFKIMLKNPDIKAILVNIFGGIMKCDVIAQGVIAAAKQVDLTVP 344

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           LV+R+ G N ++G +++AESGL +ITA ++ +AA+K+V+A +G
Sbjct: 345 LVVRMAGTNEELGKKILAESGLPIITANNMAEAAEKVVNAAQG 387


>gi|161869871|ref|YP_001599040.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis
           053442]
 gi|189081757|sp|A9M4F8|SUCC_NEIM0 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161595424|gb|ABX73084.1| succinyl-CoA synthetase beta subunit [Neisseria meningitidis
           053442]
          Length = 388

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILARNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|325142236|gb|EGC64653.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           961-5945]
 gi|325198191|gb|ADY93647.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis G2136]
          Length = 388

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|73540236|ref|YP_294756.1| succinyl-CoA synthetase subunit beta [Ralstonia eutropha JMP134]
 gi|123625816|sp|Q475M1|SUCC_RALEJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|72117649|gb|AAZ59912.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ralstonia
           eutropha JMP134]
          Length = 389

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/386 (50%), Positives = 266/386 (68%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVAEALKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKTYATNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +A +AS++GGMDIEEVA   P+KI  L+I+P  G+T  D   +   + + 
Sbjct: 111 SLVVDRVSQKIALMASSEGGMDIEEVAAHTPEKIHTLIIEPSTGLTDADADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF D D SL EINPLI+   G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVAQARQALQGLYKAFYDTDASLAEINPLILTGEGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +V+ IL+NIFGGIMRCDV+ +G++SA K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNVEAILVNIFGGIMRCDVIAEGVISASKAVNLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMEE 376


>gi|299067884|emb|CBJ39097.1| Succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum CMR15]
          Length = 388

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/381 (52%), Positives = 264/381 (69%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHAGG       
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +    ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 54  ---RGKGGGVKVAKSLDEVKTYASNILGMTLVTHQTGPEGKLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA+ +P+KI  LLIDP  G+       +   + + 
Sbjct: 111 SLVVDRVSQQVALMASSEGGMDIEEVAESHPEKIHTLLIDPQAGLQDAQADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D S  EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASQAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDVKAILVNIFGGIMRCDVIAEGVIAAAKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N D+G +++A+SGL +I A
Sbjct: 351 GTNEDLGKKMLADSGLPIIAA 371


>gi|332526156|ref|ZP_08402291.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
 gi|332109996|gb|EGJ10624.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
          Length = 386

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR + VPV +G    +V  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRAHGVPVPRGYAAFTVQEALEAAQKLGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L+T QTGP G +V  + VE+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLAEVETLASQILGMQLVTHQTGPEGQKVRRLLVEEGADIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+T      L   + + 
Sbjct: 111 AALTDRATQKVALMASSEGGMDIEEVAHATPEKILKVFVDPLVGLTEAQARELAVGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             ++    D+F  LY  +   D SL EINPLI+  +G ++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASQAQAVDVFQKLYACYMASDASLAEINPLILEGHGGIKALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K V + +PLV+R++
Sbjct: 291 GGASAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIAEGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++A+SGL +I A  + +AA  IV AV+
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMAEAATAIVKAVQ 386


>gi|284799553|ref|ZP_05984280.2| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria subflava
           NJ9703]
 gi|284797374|gb|EFC52721.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria subflava
           NJ9703]
          Length = 406

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 19  MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 76  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 128

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 129 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 188

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 189 KDKQINEFVKLMTGAYKAFIENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 248

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 249 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 308

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 309 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 368

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 369 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 404


>gi|88703459|ref|ZP_01101175.1| Succinyl-CoA synthetase beta chain [Congregibacter litoralis KT71]
 gi|88702173|gb|EAQ99276.1| Succinyl-CoA synthetase beta chain [Congregibacter litoralis KT71]
          Length = 389

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+ G  + S  AA  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKRLFAEYGLPVSTGHAVDSPQAAVEAADLIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +       LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKDEIAEFTSHWLGKNLVTYQTDANGQPVSKILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI + +IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILRAVIDPLNGAQPYQGRELAFNLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++L+EINPL+I   G L  LD+KI  D NALYR  +++
Sbjct: 171 GEQIKQFVKIFLGLAKMFQEKDLALIEINPLVITTEGNLHCLDAKIGVDGNALYRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDERESHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD  VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDKVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGRKVLADSGLNIIAATSLTDAAQQAVKAAGG 387


>gi|171464130|ref|YP_001798243.1| succinyl-CoA synthetase, beta subunit [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|226734971|sp|B1XRZ4|SUCC_POLNS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|171193668|gb|ACB44629.1| succinyl-CoA synthetase, beta subunit [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 389

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/381 (49%), Positives = 264/381 (69%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LLR++NVPV  G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L T QTGP G +VN + +EDGADI +E Y 
Sbjct: 52  -GGRGKGGGVKLAKSMDEVKRYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +     +AS++GGMDIEEVA+ +P+KI K+ +DP++G+T  D   +   + + 
Sbjct: 111 SIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIIAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F NLYK + D D SL+EINPLI+  NG+++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDIDEEDAAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDAIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +V+ IL+NIFGGIMRCDV+  G+++A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKNVQAILVNIFGGIMRCDVIADGVVTACKVVNLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N ++G +++A+SGL +I+ 
Sbjct: 351 GTNEELGKKILADSGLPIIST 371


>gi|261377713|ref|ZP_05982286.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria cinerea
           ATCC 14685]
 gi|269145988|gb|EEZ72406.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria cinerea
           ATCC 14685]
          Length = 388

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFIENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|301156158|emb|CBW15629.1| succinyl-CoA synthetase, beta subunit [Haemophilus parainfluenzae
           T3T1]
          Length = 388

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L ++Y++PV++GVV  +   AE A+  L G +++ K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFKQYDLPVSEGVVCQTADEAEMALFQLNGDVWIAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +   + LG  L+T QT   G  VN +Y+E+   I +ELYL
Sbjct: 58  -------GGVKLVHNTEEARAFADKWLGQHLVTFQTDKKGQPVNSIYIEETCQIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS+ GGM+IE+VA++ P+ I K+ IDPL+G        L   L L 
Sbjct: 111 GAVIDRASQKVVFMASSAGGMNIEDVARETPELIHKVAIDPLVGGMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L + F +KD SL+E+NPL++ K G L  LD+K+  DDN+LYRH D+ 
Sbjct: 171 GEQNKQFAAIFVKLSQLFIEKDFSLVEVNPLVVTKEGNLICLDAKVGIDDNSLYRHPDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+S+ DSRE EA+++ L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALRDLSQSDSREAEAEKYQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D +VK +L+NIFGGI+RCD++ +G+++A++E+ + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDKNVKSVLVNIFGGIVRCDLIAEGVVAAIQEIGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  ++AESG+N+I A  L +
Sbjct: 351 GTNAPQGRAILAESGVNLIAAHTLQE 376


>gi|119356458|ref|YP_911102.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           phaeobacteroides DSM 266]
 gi|189046908|sp|A1BE51|SUCC_CHLPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119353807|gb|ABL64678.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 392

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/400 (47%), Positives = 269/400 (67%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV-ISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A ++AI+       P+ V+K+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAFSPEEAKQAAIQLFEEQNSPVVVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S + V    +++LG TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAKSPEEVFDIAQQMLGITLVTHQTGPEGKEVRRLLVEEGMNIDK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P+K+ K+ ++PL G+ +         
Sbjct: 111 EFYVGITLDRSTSQNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPLFGLQAFQARQAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           LEL+G+   +       LY A+   D ++ EINPL++ K GR+  LD+KI+FD NAL+RH
Sbjct: 171 LELEGEQFKNTVKFITALYNAYTSIDAAIAEINPLVVTKEGRVLALDAKINFDSNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A K+V +++P++
Sbjct: 291 LDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKVDLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG N  I  +++ ESGLN+I A  L DAA+K+  A++
Sbjct: 351 VRLEGTNASIAQKMLDESGLNLIAAKGLHDAAKKVHEALE 390


>gi|91790511|ref|YP_551463.1| succinyl-CoA synthetase subunit beta [Polaromonas sp. JS666]
 gi|123355075|sp|Q122H7|SUCC_POLSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91699736|gb|ABE46565.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Polaromonas sp.
           JS666]
          Length = 386

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/400 (48%), Positives = 263/400 (65%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIR----EILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                   G      +   I D++    EILG  L T QTGP G +V  +Y+EDGADI +
Sbjct: 52  -----GGRGKGGGVKVAKTIDDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQK 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+S + DR S  VAFIAS++GGMDIEEVA   P+KI K+ +DPL+G+T      +   
Sbjct: 107 EYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAG 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + +   +     D+   LYK + + D SL+EINPL     G +  LD+K +FD NAL+RH
Sbjct: 167 IGMPADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANF
Sbjct: 227 PEIVAYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIADGVITACKAVNLSVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +R++G N D+G +++A+SGL +I A  + +AA KIV AVK
Sbjct: 347 VRMKGTNEDLGKKMLADSGLPIIAADTMAEAATKIVAAVK 386


>gi|187736200|ref|YP_001878312.1| succinyl-CoA synthetase, beta subunit [Akkermansia muciniphila ATCC
           BAA-835]
 gi|226734104|sp|B2UMH5|SUCC_AKKM8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187426252|gb|ACD05531.1| succinyl-CoA synthetase, beta subunit [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 393

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/386 (50%), Positives = 261/386 (67%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L  ++ V   KG+  S+   A    + +    YVVK+Q+HAGGRGKG FK
Sbjct: 1   MNIHEYQAKQLFERFGVATPKGIAASTAQEAAQTARNMGLSQYVVKAQVHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V  S++ V     ++L   L+TKQTG  G  V+ + V +  D+ +E Y 
Sbjct: 61  N---GFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYF 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR       +AST+GGMDIEEVA   P+ I +  I+P +G+       +   LEL 
Sbjct: 118 AILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELT 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  N+YK F   D SL+EINPL++  + R+  LD+K +FDDNALYRH +I 
Sbjct: 178 GPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDAKFNFDDNALYRHPEIM 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD +EED RE+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 238 EMRDETEEDPREVEAGKYDLNYIGLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++ V  AF+I+TSD +VK +L+NIFGGIMRCDV+ +GI++A K + + IPLV+RLE
Sbjct: 298 GSATEEMVTNAFRILTSDKNVKALLVNIFGGIMRCDVIAQGIVAAAKNIDMKIPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+IG +++A+SG+ +I A +LD+
Sbjct: 358 GTNVEIGKKILADSGIAIIPADNLDE 383


>gi|261401146|ref|ZP_05987271.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria lactamica
           ATCC 23970]
 gi|269208924|gb|EEZ75379.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria lactamica
           ATCC 23970]
          Length = 388

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|82703117|ref|YP_412683.1| succinyl-CoA synthetase, beta subunit [Nitrosospira multiformis
           ATCC 25196]
 gi|82411182|gb|ABB75291.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosospira
           multiformis ATCC 25196]
          Length = 398

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L ++ +P+ +G    +V  A +  K L G  +VVK+QIHA         
Sbjct: 1   MKIHEYQAKHILHQFGIPIPRGHSCFNVDEAVATAKKLGGSTWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG TL+T QTG  G  V  + VE G DI +E Y+
Sbjct: 52  -GGRGKGGGVKIARSLDEVKQFAEKILGMTLVTPQTGSQGQIVRRLLVEQGLDIRKEFYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR    V  +AS +GGMDIE VA DYP+KI K+ IDP  G+T+ +   +   +   
Sbjct: 111 GLVVDRGRRRVCLMASAEGGMDIERVAADYPEKIHKVYIDPGAGLTATEAEDITSRIGFS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +   L  NLY+A+   D SL+EINPLI+    R+  LD+K++FDDNAL+RH DI 
Sbjct: 171 GAAVAETAALLQNLYRAYDSTDASLVEINPLILTGENRIVALDAKMNFDDNALFRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+ EED+ EIEA ++ LSYI+LDGNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DLRDLDEEDAAEIEASRYGLSYISLDGNIGCLVNGAGLAMATMDIIKFYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++ ILINIFGGIM+CDV+ +G+++A +EV++N+PLV+RLE
Sbjct: 291 GGATTEKVMEAFKLMLRNPRLQAILINIFGGIMKCDVIAEGVVAAAREVRLNVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N +IG +++ ESGL +I+A ++ D
Sbjct: 351 GTNAEIGKKILTESGLAIISAANMAD 376


>gi|240080859|ref|ZP_04725402.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA19]
 gi|240115528|ref|ZP_04729590.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID18]
 gi|240117823|ref|ZP_04731885.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID1]
 gi|260440661|ref|ZP_05794477.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|268596976|ref|ZP_06131143.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268601203|ref|ZP_06135370.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268603523|ref|ZP_06137690.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID1]
 gi|291043969|ref|ZP_06569685.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|268550764|gb|EEZ45783.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268585334|gb|EEZ50010.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268587654|gb|EEZ52330.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID1]
 gi|291012432|gb|EFE04421.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI2]
          Length = 388

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V +S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVNSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+G IGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGKIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|328875554|gb|EGG23918.1| succinate-CoA ligase [Dictyostelium fasciculatum]
          Length = 418

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/395 (48%), Positives = 263/395 (66%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEYQ+K+L+ +Y V   K  VIS    A  A   L     V+K+Q+HAGGRGKG FK
Sbjct: 24  LDLHEYQSKSLMDQYGVNTQKWRVISKADEAPKAASELNAKELVIKAQVHAGGRGKGTFK 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV++ ++ K        +LG  L+TKQT   G+ V  V + +  D  RELY 
Sbjct: 84  E--TGYKGGVKLCTTGKEAQELSGHMLGKHLVTKQTTADGTLVQKVMIAESVDPARELYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR SG    +AS +GG+DIE VA++ P+ I+K ++D   GV  E    L + L  +
Sbjct: 142 AILMDRASGGPVMVASPKGGVDIEAVAEETPELIYKEVVDITKGVQPEQTRRLAEKLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       +   NLYK F   D + +E+NP     +G++  +D+KI+FDDNA +R  DI 
Sbjct: 202 GDKLKIAQEQMENLYKLFIKSDATQVEVNPFAETTDGKIYAMDAKINFDDNASFRQKDIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD++EED RE+EA QH L+YI +DGNIGCMVNGAGLAMATMDIIKL+ G PANFLDVG
Sbjct: 262 DMRDIAEEDPREVEASQHGLNYIGMDGNIGCMVNGAGLAMATMDIIKLHKGTPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA + +V  AFKI+T D  VK IL+NIFGGIM+CDV+  G++ A K+V + IPLV+RL 
Sbjct: 322 GGATEKQVTEAFKILTKDKQVKAILVNIFGGIMKCDVIAAGVVGACKQVGLKIPLVVRLA 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG  ++ +SG N+ITA DLDDAA K V ++
Sbjct: 382 GTNVEIGKDILEKSGFNIITANDLDDAAIKAVASI 416


>gi|59801309|ref|YP_208021.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA
           1090]
 gi|240014234|ref|ZP_04721147.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI18]
 gi|240016670|ref|ZP_04723210.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA6140]
 gi|240121797|ref|ZP_04734759.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           PID24-1]
 gi|240125626|ref|ZP_04738512.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-92-679]
 gi|240128082|ref|ZP_04740743.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268684215|ref|ZP_06151077.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686471|ref|ZP_06153333.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-93-1035]
 gi|293399169|ref|ZP_06643334.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           gonorrhoeae F62]
 gi|75355993|sp|Q5F878|SUCC_NEIG1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|59718204|gb|AAW89609.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           gonorrhoeae FA 1090]
 gi|268624499|gb|EEZ56899.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-92-679]
 gi|268626755|gb|EEZ59155.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291610583|gb|EFF39693.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           gonorrhoeae F62]
          Length = 388

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+G IGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGKIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|110597778|ref|ZP_01386062.1| succinyl-CoA synthetase, beta subunit [Chlorobium ferrooxidans DSM
           13031]
 gi|110340685|gb|EAT59165.1| succinyl-CoA synthetase, beta subunit [Chlorobium ferrooxidans DSM
           13031]
          Length = 392

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/399 (47%), Positives = 267/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVH----AAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S      AAE   + L  P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAYSPEEAKTAAEQLFEELSCPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +      ++++G TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAKSAEEAFEIAQQLIGLTLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P+K+ K+ IDPL G+           
Sbjct: 111 EFYVGITLDRSTSQNVLMVSTEGGMEIEKVAEETPEKLLKIQIDPLYGMQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +  +    LYKA+   D ++ EINPL++ K G++  LD+KI+FDDNALYRH
Sbjct: 171 LGLEGEQFRNAVNFISALYKAYTSIDAAIAEINPLVVTKEGKVLALDAKINFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KEFIELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A  ++ +++P++
Sbjct: 291 LDVGGSASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAATKIGLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N  I  +++ +SGLN+I+A  L DAAQK+  A+
Sbjct: 351 VRLEGTNAPIAQKMLDDSGLNLISANGLRDAAQKVNKAL 389


>gi|325134125|gb|EGC56777.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis M13399]
 gi|325144250|gb|EGC66555.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M01-240013]
 gi|325206211|gb|ADZ01664.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M04-240196]
          Length = 388

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|332306151|ref|YP_004434002.1| succinyl-CoA synthetase, beta subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173480|gb|AEE22734.1| succinyl-CoA synthetase, beta subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 389

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G    +  AA  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSEGYAAETPQAAVEAADRIGGTEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKNKDEIKAFAQKWLGQNLVTYQTDEAGQPVSKILVESCTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD++L+E+NPL+I  +G L  LD+K++ D NA YR   +Q
Sbjct: 171 GVQIKQFTQIFMGLAKLFEEKDIALIEVNPLVIKDDGNLHCLDAKVAMDSNAAYRQPKLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAA+++V A  G
Sbjct: 351 GTNAELGREVLANSGLDIIAASSLTDAAKQVVKAAGG 387


>gi|92113346|ref|YP_573274.1| succinyl-CoA synthetase subunit beta [Chromohalobacter salexigens
           DSM 3043]
 gi|91796436|gb|ABE58575.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Chromohalobacter salexigens DSM 3043]
          Length = 409

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/397 (50%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+KG  + +   A  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 22  MNLHEYQSKQLFADYGLPVSKGFAVDTPEEAAEACKKIGGDKWVVKAQVHAGGRGKA--- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +   + LG  L+T QT   G  V  + VE+  DI  ELYL
Sbjct: 79  -------GGVKLVESPADAKAFAEQWLGKNLVTFQTDEKGQPVAKILVENCTDIANELYL 131

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 132 GAVVDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQARELAFALGLE 191

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD++LLEINPL+I   G L  LD+KI  D NALYRH D+Q
Sbjct: 192 GAQIKQFTKIFLGLAKLFQEKDLALLEINPLVITDEGNLHCLDAKIGLDGNALYRHPDLQ 251

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 252 AMRDPSQEDEREAHAQEWELNYVALEGNIGCMVNGAGLAMGTMDIIKLNGGQPANFLDVG 311

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SVK +L+NIFGGI+RCD++ +GI+ AV++V +N+P+V+RLE
Sbjct: 312 GGATEERVGEAFKIILSDDSVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLE 371

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G   +A SGLN+I A  L DAAQ++V A +G
Sbjct: 372 GNNAELGAEKLASSGLNIIAATSLTDAAQQVVKAAEG 408


>gi|281209693|gb|EFA83861.1| succinate-CoA ligase [Polysphondylium pallidum PN500]
          Length = 424

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/395 (49%), Positives = 263/395 (66%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L+ KY V   K  VIS+   A+ A K L     V+K+Q+HAGGRGKG F 
Sbjct: 30  LNLHEYQSKMLMDKYGVNTQKWRVISNASEAQKAAKELNAKELVIKAQVHAGGRGKGTFI 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV++ ++ +       E+LG  L+TKQT   G+ V  V + +  D  RELY 
Sbjct: 90  E--TGFKGGVQLCTTPQEAERLSAEMLGKHLVTKQTTKDGTLVQKVMIAESVDPSRELYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR SG    +AS +GG+DIE VA++ P+ IFK  ID + GV  E    L   L   
Sbjct: 148 AILMDRASGGPVLVASPKGGVDIEAVAEETPELIFKEPIDIMKGVQPEQTLRLAKKLGFT 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G           NLY+ F   D + +E+NP     NG +  +D+KI+FDDNA +R   I 
Sbjct: 208 GDKVAVAQKQMENLYELFIKSDATQVEVNPFAETTNGEIYAMDAKINFDDNASFRQKQIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RDV+EED RE+ A +  L+YI +DGNIGC+VNGAGLAMATMDIIKL+ G PANFLDVG
Sbjct: 268 DMRDVAEEDPREVAASKFGLNYIGMDGNIGCLVNGAGLAMATMDIIKLHKGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  AFKIIT+D  VK IL+NIFGGIM+CD++ +G++SA +++ + IPLV+RL 
Sbjct: 328 GGATADQVREAFKIITTDPQVKAILVNIFGGIMKCDIIAQGVVSACQQIGLKIPLVVRLA 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG +++ +SG N+ITA+DLDDAA K V A+
Sbjct: 388 GTNVEIGQKILKDSGFNIITAVDLDDAAIKAVAAM 422


>gi|241662076|ref|YP_002980436.1| succinyl-CoA synthetase subunit beta [Ralstonia pickettii 12D]
 gi|309779742|ref|ZP_07674499.1| succinyl-CoA synthetase beta chain (SCS-beta) [Ralstonia sp.
           5_7_47FAA]
 gi|240864103|gb|ACS61764.1| succinyl-CoA synthetase, beta subunit [Ralstonia pickettii 12D]
 gi|308921481|gb|EFP67121.1| succinyl-CoA synthetase beta chain (SCS-beta) [Ralstonia sp.
           5_7_47FAA]
          Length = 388

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/381 (51%), Positives = 262/381 (68%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEAIKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V      ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVKEYASSILGMTLVTHQTGPEGKLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA+ +P+KI  LLIDP  G+       +   + + 
Sbjct: 111 SLVVDRVSQQVALMASSEGGMDIEEVAESHPEKIHTLLIDPQAGLQDAQADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D S  EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIAQARQALQGLYKAFWETDASQAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDVKAILVNIFGGIMRCDVIAEGVIAAAKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N D+G +++A+SGL +I A
Sbjct: 351 GTNEDLGKKMLADSGLPIIAA 371


>gi|15676852|ref|NP_273997.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis MC58]
 gi|21264052|sp|Q9JZP4|SUCC_NEIMB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|7226199|gb|AAF41365.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis MC58]
 gi|316985361|gb|EFV64310.1| succinyl-CoA synthetase beta chain [Neisseria meningitidis H44/76]
 gi|325140152|gb|EGC62679.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis CU385]
 gi|325200357|gb|ADY95812.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis H44/76]
          Length = 388

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|54293529|ref|YP_125944.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila str.
           Lens]
 gi|148360810|ref|YP_001252017.1| succinyl CoA synthetase subunit beta [Legionella pneumophila str.
           Corby]
 gi|296106126|ref|YP_003617826.1| succinyl-CoA synthetase beta chain [Legionella pneumophila 2300/99
           Alcoy]
 gi|81369203|sp|Q5WZ04|SUCC_LEGPL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030250|sp|A5IH21|SUCC_LEGPC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|53753361|emb|CAH14811.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila str.
           Lens]
 gi|148282583|gb|ABQ56671.1| succinyl CoA synthetase beta chain [Legionella pneumophila str.
           Corby]
 gi|295648027|gb|ADG23874.1| succinyl-CoA synthetase beta chain [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609341|emb|CBW98826.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila 130b]
          Length = 387

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV +G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +  + +LG+ L+T QT   G  VN + VE+  +I +ELYL
Sbjct: 58  -------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V  +AST+GG++IE+VA + P+KIFK+++DPL+GV           L L+
Sbjct: 111 GAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F D D+SLLEINPL+I K+G+L  LD KI+ D NAL+R   ++
Sbjct: 171 DDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RDVS+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 NMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  +G  ++ +S LNVI A  L DAA+KIV AV
Sbjct: 351 GNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAV 385


>gi|187478794|ref|YP_786818.1| succinyl-CoA synthetase subunit beta [Bordetella avium 197N]
 gi|123514488|sp|Q2KYF7|SUCC_BORA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115423380|emb|CAJ49914.1| Succinyl-CoA synthetase beta chain [Bordetella avium 197N]
          Length = 386

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/381 (50%), Positives = 259/381 (67%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ VPV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVPVPRGIPAFSVEEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG  L+T QTG  G +VN +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQLASQILGMQLVTHQTGAQGQKVNRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI    IDP++G+T      + D + + 
Sbjct: 111 SLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEYIDPIVGLTDAQAKKVADAIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LY+ + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFKKLYQCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCDV+ +G++SA K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKGVKAILVNIFGGIMRCDVIAEGVISACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N ++G +++AESGL +I+A
Sbjct: 351 GTNEELGKKMLAESGLPIISA 371


>gi|218768042|ref|YP_002342554.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis Z2491]
 gi|304387736|ref|ZP_07369916.1| succinyl-CoA ligase subunit beta [Neisseria meningitidis ATCC
           13091]
 gi|21264051|sp|Q9JUT0|SUCC_NEIMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|121052050|emb|CAM08359.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           meningitidis Z2491]
 gi|254669447|emb|CBA03309.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha153]
 gi|254672882|emb|CBA07159.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha275]
 gi|261392694|emb|CAX50267.1| succinyl-CoA synthetase beta chain (SCS-beta) [Neisseria
           meningitidis 8013]
 gi|304338212|gb|EFM04342.1| succinyl-CoA ligase subunit beta [Neisseria meningitidis ATCC
           13091]
 gi|325202254|gb|ADY97708.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M01-240149]
 gi|325207993|gb|ADZ03445.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           NZ-05/33]
          Length = 388

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|319790379|ref|YP_004152012.1| succinyl-CoA synthetase, beta subunit [Thermovibrio ammonificans
           HB-1]
 gi|317114881|gb|ADU97371.1| succinyl-CoA synthetase, beta subunit [Thermovibrio ammonificans
           HB-1]
          Length = 389

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/398 (48%), Positives = 261/398 (65%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK + +KY +PV +G+V  + H AE A K L  P+ VVK+Q+HAGGRGK    
Sbjct: 1   MKIHEYQAKEIFKKYGLPVPRGIVAHNAHEAEQAAKELGTPVVVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       E++GS L T Q  P G  +NCV +E+G +I +E Y+
Sbjct: 58  -------GGVKLAKSPEEAAKIAAEMIGSRLKTYQN-PEGLSINCVLIEEGVNIDKEFYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR +    F+ S  GGM+IEE+AK  P+ I K  +DP IG+       +   + L 
Sbjct: 110 GLTLDRETSRPVFMVSAAGGMEIEEIAKTNPELIIKEHVDPAIGLLPYQARKIAFKIGLT 169

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +  +     +   L K + D D SL+EINPL+  K      LD+KI FDDNALYRH DI
Sbjct: 170 DRKLVSQFVKILMTLSKMYFDLDASLIEINPLVKTKEDNFICLDAKIDFDDNALYRHPDI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           QEL D ++ D  E+EAK+ +L+Y+ LDGNIGCMVNGAGLAMATMD IK +GG PANFLDV
Sbjct: 230 QELEDTTQIDPLELEAKKWDLNYVRLDGNIGCMVNGAGLAMATMDTIKFFGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A  ++VAAAFK++ SD  VK I +NIFGGI+RCD +  GI+ A K+V+++ PL++RL
Sbjct: 290 GGTATVERVAAAFKLLLSDPKVKAIFVNIFGGIVRCDRIAGGIIEAAKQVELDRPLIVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV++G +++ ESGLN+I A D+ D AQK V A KG
Sbjct: 350 EGTNVELGRKMLEESGLNIIPAKDMADGAQKAVKAAKG 387


>gi|187927574|ref|YP_001898061.1| succinyl-CoA synthetase subunit beta [Ralstonia pickettii 12J]
 gi|226734976|sp|B2UGE2|SUCC_RALPJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187724464|gb|ACD25629.1| succinyl-CoA synthetase, beta subunit [Ralstonia pickettii 12J]
          Length = 388

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/381 (51%), Positives = 264/381 (69%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHAGG       
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEAIKAAETLGGPVWVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V      ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 54  ---RGKGGGVKVAKSIEQVKEYASSILGMTLVTHQTGPEGKLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA+ +P+KI  LLIDP  G+       +   + + 
Sbjct: 111 SLVVDRVSQQVALMASSEGGMDIEEVAESHPEKIHTLLIDPQAGLQDAQADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D S  EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASQAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDVKAILVNIFGGIMRCDVIAEGVIAAAKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N D+G +++A+SGL +I A
Sbjct: 351 GTNEDLGKKMLADSGLPIIAA 371


>gi|194333450|ref|YP_002015310.1| succinyl-CoA synthetase subunit beta [Prosthecochloris aestuarii
           DSM 271]
 gi|226734972|sp|B4S612|SUCC_PROA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|194311268|gb|ACF45663.1| succinyl-CoA synthetase, beta subunit [Prosthecochloris aestuarii
           DSM 271]
          Length = 390

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/399 (48%), Positives = 262/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV----HAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  +      AAE   +    P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVSVPKGIVAFTAEEARQAAEQLFEEQENPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S   V    R+++G TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAKSPDEVFDIARQMIGCTLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE VA++ P+K+ K+ I PL G+           
Sbjct: 111 EFYVGITLDRATSQNVLMVSTEGGMEIETVAEETPEKLLKIQIHPLQGLQGFQARQAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G    +       LYKA+   D S+ EINPL+I K G++  LD+KI+FD NAL+RH
Sbjct: 171 LGLEGDKFKNTVKFITALYKAYTAIDASIAEINPLVITKEGKVMALDAKINFDSNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V   FKII SD +VK ILINIFGGI+RCD +  G++ A K+V +++P++
Sbjct: 291 LDVGGSASPETVEEGFKIIMSDKNVKAILINIFGGIVRCDRVAGGVIEAAKKVGLDMPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N +I  +++ ESGLN+I A  L +AAQK+  A+
Sbjct: 351 VRLEGTNAEIAQKMLDESGLNLIAANGLREAAQKVNEAL 389


>gi|114330248|ref|YP_746470.1| succinyl-CoA synthetase, beta subunit [Nitrosomonas eutropha C91]
 gi|114307262|gb|ABI58505.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosomonas
           eutropha C91]
          Length = 397

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/384 (50%), Positives = 262/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKA+L +Y + V  G+   SV  A  A + L G  +VVK+QI+AGGRGK    
Sbjct: 1   MKIHEYQAKAILSRYAISVPAGIACFSVEEAILAAEKLGGDKWVVKAQIYAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V      +L + L+T QTGP G  V  +Y+E G DI  E Y+
Sbjct: 58  -------GGVKLAKSIVEVRQFSEAMLFAPLVTHQTGPQGQIVRRLYIEQGIDISHEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR S  V+ IAS  GGMDIE VA   P+KI K  I+PL G+  +D   +   + L 
Sbjct: 111 ALVVDRASQCVSLIASDAGGMDIEGVATSTPEKIHKTQINPLEGLNLQDAERVVRQINLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R     +   LY+AF + D+SLLEINPLI+  + RL  LD+K++FDDNAL+RH +I 
Sbjct: 171 ESCRSAAVSMLGALYQAFDENDISLLEINPLIVTPDNRLIALDAKMNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ E+D  E+EA +H LSYI LDG+IGC+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 ALRDLDEDDPLEVEAARHGLSYIPLDGDIGCLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++ IL+NIFGGIMRCDV+  G++SAV+EVK+ +PL++RLE
Sbjct: 291 GGATVEKVTEAFKLMLRNPDLQAILVNIFGGIMRCDVIADGVVSAVREVKLAVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G +++A+SGL +I   ++
Sbjct: 351 GTNVELGKKILADSGLTIIAGSNM 374


>gi|301167411|emb|CBW26993.1| succinyl-CoA synthetase beta chain (SCS-beta) [Bacteriovorax
           marinus SJ]
          Length = 390

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/398 (48%), Positives = 276/398 (69%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L++K+ + V  G V  SV  A    K L G ++VVK+QIHAGGRGK    
Sbjct: 1   MNVHEYQAKELMKKFGIKVLGGQVAKSVDEAVEGAKKLGGNVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   +ILG TL+T QTGP G +V  + VE+G +I  E Y 
Sbjct: 58  -------GGVKLAKNLDEVKAHADDILGKTLVTHQTGPEGKKVLTLLVEEGCEIEHEYYA 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +G + F+AS++GG++IE+VA++ P+KI K+ +DP  G T      L   + ++
Sbjct: 111 GIVLDRATGKITFMASSEGGVEIEKVAEETPEKIIKVAVDPAAGFTPFIGRKLAYGIGIK 170

Query: 181 GQARI-DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +  + +    F  LY  + D D ++ EINPL+  K G +  LD+K++FDDNAL+RH +I
Sbjct: 171 DKDLVKEATKFFKGLYDLYVDTDCTIAEINPLVKTKQGEIIALDAKLNFDDNALFRHPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD +EE + E++A ++ LSYI+LDGNIGC+VNGAGLAM TMDIIKL+GG PANFLDV
Sbjct: 231 EEMRDPTEESAEELDAAKYGLSYISLDGNIGCLVNGAGLAMGTMDIIKLHGGEPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++ V  AF II SDS+VK IL+NIFGGIM+CD++ +G+++A K + + +PLV+RL
Sbjct: 291 GGGATKETVEKAFSIILSDSNVKAILVNIFGGIMKCDIIAEGVVAAAKSLGVTVPLVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV +G +++ ES L +I A DL DAA K+V A KG
Sbjct: 351 EGTNVALGKKILNESDLTIIAADDLADAAAKVVEATKG 388


>gi|54296568|ref|YP_122937.1| succinyl-CoA synthetase subunit beta [Legionella pneumophila str.
           Paris]
 gi|81371112|sp|Q5X7K6|SUCC_LEGPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|53750353|emb|CAH11747.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila str.
           Paris]
          Length = 387

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV +G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +  + +LG+ L+T QT   G  VN + VE+  +I +ELYL
Sbjct: 58  -------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA + P+KIFK+++DPL+GV           L L+
Sbjct: 111 GAVVDRATRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F D D+SLLEINPL+I K+G+L  LD KI+ D NAL+R   ++
Sbjct: 171 DDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RDVS+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 NMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  +G  ++ +S LNVI A  L DAA+KIV AV
Sbjct: 351 GNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAV 385


>gi|109898121|ref|YP_661376.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas atlantica
           T6c]
 gi|123064687|sp|Q15UW6|SUCC_PSEA6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|109700402|gb|ABG40322.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 389

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G    +  AA  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSEGYAAETPQAAVEAADRIGGTEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKNKDEIKAFAQKWLGQNLVTYQTDEAGQPVSKILVESCTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD++L+E+NPL+I  +G L  LD+K++ D NA YR   +Q
Sbjct: 171 GVQIKQFTQIFMGLAKLFEEKDIALIEVNPLVIKDDGNLHCLDAKVAMDSNAAYRQPKLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAA+++V A  G
Sbjct: 351 GTNAELGRDVLANSGLDIIAASSLTDAAKQVVKAAGG 387


>gi|309380079|emb|CBX21490.1| putative succinyl-CoA synthetase beta subunit [Neisseria lactamica
           Y92-1009]
          Length = 388

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|225075113|ref|ZP_03718312.1| hypothetical protein NEIFLAOT_00112 [Neisseria flavescens
           NRL30031/H210]
 gi|224953597|gb|EEG34806.1| hypothetical protein NEIFLAOT_00112 [Neisseria flavescens
           NRL30031/H210]
          Length = 406

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 19  MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 76  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 128

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 129 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 188

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 189 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 248

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 249 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 308

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 309 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 368

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 369 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 404


>gi|313668599|ref|YP_004048883.1| succinyl-CoA synthetase beta subunit [Neisseria lactamica ST-640]
 gi|313006061|emb|CBN87522.1| putative succinyl-CoA synthetase beta subunit [Neisseria lactamica
           020-06]
          Length = 388

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|197122638|ref|YP_002134589.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter sp. K]
 gi|220917421|ref|YP_002492725.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|226734921|sp|B4UDP4|SUCC_ANASK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778426|sp|B8JAE0|SUCC_ANAD2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|196172487|gb|ACG73460.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter sp. K]
 gi|219955275|gb|ACL65659.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 388

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/396 (51%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRK+ V V +G +  +   AE A + L G +  VK+QIHA         
Sbjct: 1   MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGISAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          +LG  L T QTGP G  V  VYVE+G  I RELYL
Sbjct: 52  -GGRGKGGGVKLARSPDEARQHAEAMLGMMLKTPQTGPDGQEVRKVYVEEGCRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G +A +AS +GG+DIEEVA  +P KI +  I PL G+       L   L L 
Sbjct: 111 GMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          LY A+   D SL EINPL+I   G +  LD+K++FDDNALYRH DI 
Sbjct: 171 GDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED +E +AK+++LSYIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+DKV AAFKII SD  VK +L+NIFGGIM+CDV+  GI++A K+V ++IPLV+RLE
Sbjct: 291 GGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++A S L +I A DL DAA+K+V A +
Sbjct: 351 GTNVELGKDILAHSELKIIPADDLGDAARKVVQAAR 386


>gi|52840778|ref|YP_094577.1| succinyl-CoA synthetase subunit beta [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627889|gb|AAU26630.1| succinyl CoA synthetase beta chain [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 406

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/395 (50%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y++PV +G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 20  MNLHEYQAKQLFASYDLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKA--- 76

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +  + +LG+ L+T QT   G  VN + VE+  +I +ELYL
Sbjct: 77  -------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYL 129

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V  +AST+GG++IE+VA + P+KIFK+++DPL+GV           L L+
Sbjct: 130 GAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLK 189

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL+I K+G+L  LD KI+ D NAL+R   ++
Sbjct: 190 DDQIKQFTHLMMGLGKMFVECDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLK 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RDVS+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 250 NMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 310 GGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 369

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  +G  ++ +S LNVI A  L DAA+KIV AV
Sbjct: 370 GNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAV 404


>gi|193215966|ref|YP_001997165.1| succinyl-CoA synthetase subunit beta [Chloroherpeton thalassium
           ATCC 35110]
 gi|226734937|sp|B3QWF8|SUCC_CHLT3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|193089443|gb|ACF14718.1| succinyl-CoA synthetase, beta subunit [Chloroherpeton thalassium
           ATCC 35110]
          Length = 392

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/399 (47%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LR + V V KG+V  S   A+ A +TL     G + VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKEILRGFGVTVPKGIVAFSAEEAKKAAETLLTEQGGGVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S         +++G+TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLVRSADEAFEVATQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYL + +DR +     + ST+GGM+IE+VA++ P+K+ K+ I P +G+           
Sbjct: 111 ELYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQIHPTLGLQPNQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +       LY A+   D SL EINPL++ K GR+  LD+KI+FDDNAL+RH
Sbjct: 171 LGLEGEQFKNAVKFISALYNAYMKADCSLAEINPLVVTKEGRVIALDAKINFDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  +LRD SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KDYIDLRDTSEEDPLEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+   V   F+II +D +VK IL+NIFGGI+RCD +  G++ A K + I++P++
Sbjct: 291 LDVGGGANPQTVQEGFRIILTDPNVKAILVNIFGGIVRCDRVAGGVIEAAKNIDIHVPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N DI  +++ ESGLN+++A  L DAA+K+  A+
Sbjct: 351 VRLEGTNADIAQKMLDESGLNLVSAKGLSDAAKKVNEAL 389


>gi|124515902|gb|EAY57411.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum rubarum]
          Length = 396

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/404 (47%), Positives = 269/404 (66%), Gaps = 17/404 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-------GPLYVVKSQIHAGG 53
           MNIHEYQAK L +++ +PV  GV++ SV  A   +   P         ++ VK+QIHAGG
Sbjct: 1   MNIHEYQAKELFKEFGIPVPNGVLVESVEEARKVVNESPLFRGESRPAVWAVKAQIHAGG 60

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           GGV++    + +   + +ILG TL+T QTGP G +V  V++E+G++
Sbjct: 61  RGKA----------GGVKLARKSEEIPDLVSQILGKTLVTHQTGPEGKKVLKVWIEEGSN 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           I RE YL ++VDRT+  +  IAST+GGM+IEEVA+ +P+KIF L +DPL G +      +
Sbjct: 111 IAREFYLGVVVDRTTRRMTLIASTEGGMEIEEVAEKHPEKIFHLALDPLEGYSPYIGRRV 170

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L    +    ++  +L   F  +D S++EINPL++ +  RL  LD+K+ FDDNA+
Sbjct: 171 SQFLGLPFSTQTQMVNIVRDLLDFFQRRDASMVEINPLVLTREDRLIALDAKVGFDDNAV 230

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
            R   I+ LRD+SEE+  EIEA ++NL+Y+ LDGNI CMVNGAGLAMATMD+I L GG+P
Sbjct: 231 GRQPAIRGLRDLSEENPLEIEASKYNLNYVKLDGNIACMVNGAGLAMATMDVIALAGGSP 290

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA ++ V  AF+II  D  VKGI +NIFGGI+RC+ +  GI++A ++VKI I
Sbjct: 291 ANFLDVGGGASKETVEQAFRIILGDPHVKGIFVNIFGGIVRCERIAGGIIAAAQDVKITI 350

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           PLV+RL+G N   G  ++  SGL +  A +L + A+KIV AVKG
Sbjct: 351 PLVVRLQGTNAKEGREMLRSSGLAIQVAEELYEGAEKIVLAVKG 394


>gi|319410291|emb|CBY90633.1| succinyl-CoA synthetase beta chain (SCS-beta) [Neisseria
           meningitidis WUE 2594]
          Length = 388

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAGKIVAAV 386


>gi|325981979|ref|YP_004294381.1| succinyl-CoA synthetase, beta subunit [Nitrosomonas sp. AL212]
 gi|325531498|gb|ADZ26219.1| succinyl-CoA synthetase, beta subunit [Nitrosomonas sp. AL212]
          Length = 386

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/394 (49%), Positives = 271/394 (68%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRKYN+   +G+   SV+ A  A + L G ++ VK+QI+A         
Sbjct: 1   MKIHEYQAKEILRKYNITTPRGIACFSVNEAVQAAQQLGGEVWAVKAQIYA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     EIL   LIT QTGP G  V+ +++E G  I +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLEEVRQYAGEILNMRLITHQTGPEGQIVHRLFIEQGVQIEKEFYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR    V  +AS++GG +IE+VA + P+KI K+LIDP+ G+  +    +   + + 
Sbjct: 111 GMVVDRGHQRVCLMASSEGGTEIEKVAAEMPEKIHKVLIDPITGLGQQQAEEVAQKIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +  D   L   LY+AF + D SLLEINPL++    R+  LD+K++FDDNAL+RH +I 
Sbjct: 171 KHSLSDAVTLLQCLYQAFDETDASLLEINPLVLTAGHRVMALDAKMNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  EIEA +H LSYI LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 ALRDLDEEDPIEIEASKHELSYIPLDGNIGCLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++GIL+NIFGGIM+CDV+ +G+++A ++V++ +PLV+RLE
Sbjct: 291 GGATTEKVTEAFKLMLRNPKLQGILVNIFGGIMKCDVIAQGVVAAARDVQLTVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV++G +++A+SGL +I+A ++ DAAQK V A
Sbjct: 351 GTNVNLGKKILADSGLKIISADNMADAAQKAVSA 384


>gi|145635045|ref|ZP_01790751.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           PittAA]
 gi|229844849|ref|ZP_04464987.1| transcriptional regulator CysB [Haemophilus influenzae 6P18H1]
 gi|145267653|gb|EDK07651.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           PittAA]
 gi|229812230|gb|EEP47921.1| transcriptional regulator CysB [Haemophilus influenzae 6P18H1]
          Length = 389

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT  +G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKSGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  V FIAS+ GGM+IEE+A++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SALVDRASQKVVFIASSAGGMNIEEIAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GVQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKDRVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++A+S +N++TA +L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILAQSDVNILTAQNLQQAAELAVNAAKG 387


>gi|78186385|ref|YP_374428.1| succinyl-CoA synthetase, beta subunit [Chlorobium luteolum DSM 273]
 gi|123583394|sp|Q3B5J6|SUCC_PELLD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78166287|gb|ABB23385.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           luteolum DSM 273]
          Length = 391

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/399 (48%), Positives = 262/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A+ A + L      P+ V+K+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAYSAEEAKQAAEQLFAEQDSPVVVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +       ++LG+TL+T QTGP G  V  + VE+G +I R
Sbjct: 61  A----------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRLLVEEGMNIDR 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE+VA++ P+ + K+ +D   G+           
Sbjct: 111 EFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +       LY A+   D +L EINPL++ K GR+  LD+KI+FD NALYRH
Sbjct: 171 LGLEGEQFRNAVSFITALYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KDFIELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A +++ +N+P++
Sbjct: 291 LDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAARKIGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N DI  +++ ESGLN+I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNADIAQKMLDESGLNLIAADGLKDAAQKVNQAL 389


>gi|325132159|gb|EGC54855.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis M6190]
 gi|325138091|gb|EGC60664.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis ES14902]
          Length = 388

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|319637660|ref|ZP_07992426.1| succinyl-CoA ligase subunit beta [Neisseria mucosa C102]
 gi|317400815|gb|EFV81470.1| succinyl-CoA ligase subunit beta [Neisseria mucosa C102]
          Length = 388

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|262371937|ref|ZP_06065216.1| succinyl-CoA synthetase subunit beta [Acinetobacter junii SH205]
 gi|262311962|gb|EEY93047.1| succinyl-CoA synthetase subunit beta [Acinetobacter junii SH205]
          Length = 388

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 281/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR  ++
Sbjct: 171 KDKQIGQFVKIMSAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPEV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+KIV AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKIVAAVK 387


>gi|33593524|ref|NP_881168.1| succinyl-CoA synthetase subunit beta [Bordetella pertussis Tohama
           I]
 gi|33597218|ref|NP_884861.1| succinyl-CoA synthetase subunit beta [Bordetella parapertussis
           12822]
 gi|33601064|ref|NP_888624.1| succinyl-CoA synthetase subunit beta [Bordetella bronchiseptica
           RB50]
 gi|81424751|sp|Q7VVU5|SUCC_BORPE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81426834|sp|Q7W789|SUCC_BORPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81431308|sp|Q7WKM5|SUCC_BORBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|33572880|emb|CAE42816.1| Succinyl-CoA synthetase, beta chain [Bordetella pertussis Tohama I]
 gi|33573645|emb|CAE37930.1| Succinyl-CoA synthetase, beta chain [Bordetella parapertussis]
 gi|33575499|emb|CAE32577.1| Succinyl-CoA synthetase, beta chain [Bordetella bronchiseptica
           RB50]
 gi|332382932|gb|AEE67779.1| succinyl-CoA synthetase subunit beta [Bordetella pertussis CS]
          Length = 386

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ V V +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L+T QTGP G +V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR +  V  +AS++GGMDIEEVA   P+KI K+ +DP  G+T  + A L   + + 
Sbjct: 111 GIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +       F  LYKA+ D D SL EINPLI+  +G +  LD+K +FD NAL+RH +I 
Sbjct: 171 EASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA K+V AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKVVAAVK 386


>gi|325128083|gb|EGC50978.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis N1568]
          Length = 388

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDIYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|332531168|ref|ZP_08407081.1| succinyl-CoA synthetase subunit beta [Hylemonella gracilis ATCC
           19624]
 gi|332039275|gb|EGI75688.1| succinyl-CoA synthetase subunit beta [Hylemonella gracilis ATCC
           19624]
          Length = 386

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/400 (48%), Positives = 264/400 (66%), Gaps = 18/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIAAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIR----EILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                   G      +   + D++    +ILG  L T QTGP G +V  +Y+E+GADI +
Sbjct: 52  -----GGRGKGGGVKVAKTVDDVKTLAGQILGMQLKTHQTGPEGQKVRRLYIEEGADIQK 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS + DR +  VAFIAS++GGMDIEEVA   P+KI  + +DPL+G T  +   L   
Sbjct: 107 EYYLSAVTDRGTQKVAFIASSEGGMDIEEVAHSTPEKIVTIFVDPLVGFTEANGKELAKG 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L   +     D+   LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH
Sbjct: 167 INLPADSLSQFIDICQKLYKCYMDTDASLVEINPLNRDSKGNIVALDAKFNFDSNALFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANF
Sbjct: 227 PEIVAYRDLDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A + V + +PLV
Sbjct: 287 LDVGGGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITASRAVSLKVPLV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +R++G N ++G +++AESGL +I+A  + +AA KIV AVK
Sbjct: 347 VRMKGTNEELGKKMLAESGLPIISADTMAEAATKIVAAVK 386


>gi|189499636|ref|YP_001959106.1| succinyl-CoA synthetase subunit beta [Chlorobium phaeobacteroides
           BS1]
 gi|226734935|sp|B3EN95|SUCC_CHLPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189495077|gb|ACE03625.1| succinyl-CoA synthetase, beta subunit [Chlorobium phaeobacteroides
           BS1]
          Length = 391

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/401 (48%), Positives = 259/401 (64%), Gaps = 14/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV----HAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S      AAE   +     + VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVSVPKGIVAFSPAEARQAAEQLFEEQESNVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +       +ILG+TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAQSPEEAYEIAGQILGATLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE+VA++ P KI K+ IDPL G+           
Sbjct: 111 EFYVGITLDRATSNNVLMVSTEGGMEIEKVAEETPDKILKIQIDPLHGLLGFQARQAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           LEL G+   +G      LY A+   D SL EINPL++   GR+  LD+KI+FD NALYRH
Sbjct: 171 LELDGERFKNGVKFITALYNAYVSIDASLAEINPLVVTAEGRVLALDAKINFDSNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD  EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KDFLELRDTGEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V   FKII SD +VK IL+NIFGGI+RCD +  G++ A K+V +N+P++
Sbjct: 291 LDVGGTASPETVTEGFKIIMSDKNVKAILVNIFGGIVRCDRVAAGVIEAAKKVGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +RLEG N +    ++ ESGLN+I+A  L DAA+KI  A+ G
Sbjct: 351 VRLEGTNAEAAQTMLDESGLNLISANGLRDAAEKINEALAG 391


>gi|119899622|ref|YP_934835.1| succinyl-CoA synthetase subunit beta [Azoarcus sp. BH72]
 gi|189046880|sp|A1KAU3|SUCC_AZOSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119672035|emb|CAL95949.1| probable succinyl-CoA synthetase, beta chain [Azoarcus sp. BH72]
          Length = 386

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRKY V   +G+   SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKEVLRKYGVVTPRGIPCFSVDEAVKAAEELGGKIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L+T QTGP G +V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLGKSLDEVRTLAGQILGMQLVTHQTGPEGQKVRRLLIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA + P+KI K+ +DPL G+T      L   + + 
Sbjct: 111 AALTDRATQKVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLAGLTDAQAIELAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D F  LY  + + D SL EINPLI+  NG ++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASIPQAVDTFKKLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AYRDLDEEDADEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A KEV +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVVAAAKEVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I+A  + +AA KIV  VK
Sbjct: 351 GTNEDLGKKILAESGLPIISADTMAEAATKIVAEVK 386


>gi|86158052|ref|YP_464837.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123497647|sp|Q2IIC1|SUCC_ANADE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|85774563|gb|ABC81400.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 388

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/396 (51%), Positives = 258/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRK+ V V +G +  +   AE A + L G +  VK+QIHA         
Sbjct: 1   MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGISAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          +LG  L T QTGP G  V  VYVE+G  I RELYL
Sbjct: 52  -GGRGKGGGVKLARSPDEARQHAEAMLGMMLKTPQTGPEGQEVRKVYVEEGCRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G +A +AS +GG+DIEEVA  +P KI +  I PL G+       L   L L 
Sbjct: 111 GMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          LY A+   D SL EINPL+I   G +  LD+K++FDDNALYRH DI 
Sbjct: 171 GDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED +E +AK+++LSYIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+DKV AAFKII SD  VK +L+NIFGGIM+CDV+  GI++A K+V ++IPLV+RLE
Sbjct: 291 GGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++A S L +I A DL +AA+K V A +
Sbjct: 351 GTNVELGKEILAHSELKIIPADDLGEAARKAVQAAR 386


>gi|308389603|gb|ADO31923.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           meningitidis alpha710]
 gi|325130103|gb|EGC52886.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           OX99.30304]
 gi|325136106|gb|EGC58715.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis M0579]
          Length = 388

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|160896318|ref|YP_001561900.1| succinyl-CoA synthetase subunit beta [Delftia acidovorans SPH-1]
 gi|226734942|sp|A9BQA5|SUCC_DELAS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|160361902|gb|ABX33515.1| succinyl-CoA synthetase, beta subunit [Delftia acidovorans SPH-1]
          Length = 386

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +   +ILG  L+T QTGP G +V  +Y+EDGADI +E YL
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKALAGQILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  + +DPL+G+T      L   + + 
Sbjct: 111 SCVTDRGTQKVAFIASSEGGMDIEEVAHSTPEKIITIFVDPLVGLTQAQGEELAKGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LYK + D D SL+EINPL     G +  LD+K +FD NAL+R  +I 
Sbjct: 171 ADSTAQFIDICQKLYKCYMDTDASLVEINPLNRDSKGNVVALDAKFNFDANALFRLPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKIVEAVK 386


>gi|254804841|ref|YP_003083062.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha14]
 gi|254668383|emb|CBA05491.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha14]
 gi|325204030|gb|ADY99483.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M01-240355]
          Length = 388

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|189347425|ref|YP_001943954.1| succinyl-CoA synthetase subunit beta [Chlorobium limicola DSM 245]
 gi|226734933|sp|B3EFL3|SUCC_CHLL2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189341572|gb|ACD90975.1| succinyl-CoA synthetase, beta subunit [Chlorobium limicola DSM 245]
          Length = 392

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/399 (47%), Positives = 267/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+K+ V V +G+V  S   A+ A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILKKFGVSVPRGIVAFSPDEAKQAAQQLFEEQGSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S    +   R++LG+TL+T QTGP G +V+ + VE+G +I R
Sbjct: 61  A----------GGVKLAKSPDEAMEIARQMLGATLVTHQTGPEGKQVSRLLVEEGMNIDR 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P K+ K+ +DPL G+           
Sbjct: 111 EFYVGITLDRSTSRNVLMVSTEGGMEIEKVAEETPDKLLKIQVDPLYGLQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +       LY A+   D SL EINPL++ K GR+  LD+KI+FD NAL+RH
Sbjct: 171 LGLEGEQFRNAVTFIIALYNAYMTIDASLAEINPLVVTKEGRVLALDAKINFDGNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD +EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KNFLELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  + V   FKII SD +V+ IL+NIFGGI+RCD +  GI+ A +++ +N+P++
Sbjct: 291 LDVGGGASPETVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIIQAARKIGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N +I  +++ ESGLN+I A  L DAA K+  A+
Sbjct: 351 VRLEGTNAEIAQKMLDESGLNLIAANGLHDAAAKVNQAL 389


>gi|145627822|ref|ZP_01783623.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           22.1-21]
 gi|144979597|gb|EDJ89256.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           22.1-21]
          Length = 389

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV  GVV  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFERYELPVKNGVVCQSVEEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQNVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS+ GGMDIEE+A++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASSAGGMDIEEIAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GVQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLICLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ +S +N++TA +L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILTQSDVNILTAQNLQQAAELAVNAAKG 387


>gi|114321694|ref|YP_743377.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122310849|sp|Q0A5K0|SUCC_ALHEH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114228088|gb|ABI57887.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 391

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 274/397 (69%), Gaps = 12/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L   Y++P+ +G V  S   A  A   L G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKHLFADYDIPIPQGYVARSSGEAVEAAGRLGGSVWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + + V      +LGS L+T QT   G  ++ V VE G DI RELYL
Sbjct: 58  -------GGVKVLKTKEEVEEFTDSLLGSRLVTHQTDAKGQPIHAVLVEQGLDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR S  V F+ S  GGMDIEEVA   P+KI  L +DP  G  +     +   L L+
Sbjct: 111 GALVDRASKRVTFMGSAAGGMDIEEVAASTPEKILTLAVDPAAGFQAYQGRKMAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY--RHLD 238
           G+       +  +LY+ F +KD+S++EINPLI+  +G+L  LD+K++ DDNA+   R   
Sbjct: 171 GKQIGQLVKIMKSLYRIFEEKDLSMIEINPLIVTGDGQLLALDAKVNVDDNAVEIGRQPQ 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I ++RD+++ED  E++A +HNL+YI LDGNIGCMVNGAGLAMATMD++ L+GG+PANFLD
Sbjct: 231 IADMRDITQEDEAEVQAAEHNLNYITLDGNIGCMVNGAGLAMATMDVVNLHGGSPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG   ++V AAFK+I S  +V+GIL+NIFGGI+RCDV+ +GI++AVKEV +++P+V+R
Sbjct: 291 VGGGTTTERVTAAFKLILSSDTVEGILVNIFGGIVRCDVIAEGIIAAVKEVGVDVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G +++A+SG+++I A DL DAA+K+V AV
Sbjct: 351 LEGTNVEQGKQMLADSGMDLIPADDLTDAAKKVVAAV 387


>gi|121634760|ref|YP_975005.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis FAM18]
 gi|189081758|sp|A1KTM6|SUCC_NEIMF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120866466|emb|CAM10212.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           meningitidis FAM18]
          Length = 388

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|206602146|gb|EDZ38628.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 396

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/404 (47%), Positives = 269/404 (66%), Gaps = 17/404 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-------GPLYVVKSQIHAGG 53
           MNIHEYQAK L +++ +PV  GV++ SV  A   +   P         ++ VK+QIHAGG
Sbjct: 1   MNIHEYQAKELFKEFGIPVPNGVLVESVEEARKVVSESPLFRGESRPAVWAVKAQIHAGG 60

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           GGV++    + +   + +ILG TL+T QTGP G +V  V++E+G++
Sbjct: 61  RGKA----------GGVKLARKSEEIPDLVSQILGKTLVTHQTGPEGKKVLKVWIEEGSN 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           I RE YL ++VDRT+  +  IAST+GGM+IEEVA+ +P+KIF L +DPL G +      +
Sbjct: 111 IAREFYLGVVVDRTTRRMTLIASTEGGMEIEEVAEKHPEKIFHLALDPLEGYSPYIGRRV 170

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L    +    ++  +L   F  +D S++EINPL++ +  RL  LD+K+ FDDNA+
Sbjct: 171 SQFLGLPFSTQTQMVNIVRDLLDFFQRRDASMVEINPLVLTREDRLIALDAKVGFDDNAV 230

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
            R   ++ LRD+SEE+  EIEA ++NL+Y+ LDGNI CMVNGAGLAMATMD+I L GG+P
Sbjct: 231 GRQPVVRGLRDLSEENPLEIEASKYNLNYVKLDGNIACMVNGAGLAMATMDVIALAGGSP 290

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA ++ V  AF+II  D  VKGI +NIFGGI+RC+ +  GI++A ++VKI I
Sbjct: 291 ANFLDVGGGASKETVEQAFRIILGDPHVKGIFVNIFGGIVRCERIAGGIIAAAQDVKITI 350

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           PLV+RL+G N   G  ++  SGL +  A +L + A+KIV AVKG
Sbjct: 351 PLVVRLQGTNAKEGREMLRSSGLAIQVAEELYEGAEKIVLAVKG 394


>gi|91785106|ref|YP_560312.1| succinyl-CoA synthetase subunit beta [Burkholderia xenovorans
           LB400]
 gi|123168102|sp|Q13UH9|SUCC_BURXL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91689060|gb|ABE32260.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           xenovorans LB400]
          Length = 389

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I A  +++AAQK+V A  G
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADSMEEAAQKVVAAASG 387


>gi|296157296|ref|ZP_06840132.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. Ch1-1]
 gi|295892632|gb|EFG72414.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. Ch1-1]
          Length = 389

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I A  +++AAQK+V A  G
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADSMEEAAQKVVAAASG 387


>gi|91776241|ref|YP_545997.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylobacillus
           flagellatus KT]
 gi|122985452|sp|Q1H031|SUCC_METFK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91710228|gb|ABE50156.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylobacillus
           flagellatus KT]
          Length = 387

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/386 (52%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y V V +  V  +  AA  A + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLQRYGVNVPRSQVAETAQAAVEAARALEGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V      +LG  L+T Q  P G  V  V VE    I RELY+
Sbjct: 58  -------GGVKLVRTLDEVQDIAVSLLGKRLVTYQNAPDGQPVEKVLVEATLPIARELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+   V  +AS  GGM+IEE+AKD P+KI + + DPL G+      ++   L L 
Sbjct: 111 SMLVDRSLERVVLVASAAGGMEIEEIAKDSPEKILQEVCDPLNGLVDYQARNIAFALGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F + D++LLEINPLI+   G L  LD K+S DDNALYR  ++ 
Sbjct: 171 GDQVAAFTRLAKGLYRLFKENDLALLEINPLIVTAEGALVALDCKMSVDDNALYRRRELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S++D++E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GGAPANFLDVG
Sbjct: 231 EQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    VA AFKII +D +VK IL+NIFGGIMRCD++ +GI++AVKEV I IP+V+RLE
Sbjct: 291 GGATATTVARAFKIILADPNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIEIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV++G ++++ESGL++I+A  L D
Sbjct: 351 GTNVELGRKMLSESGLSIISAAGLTD 376


>gi|57238883|ref|YP_180019.1| succinyl-CoA synthetase subunit beta [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578812|ref|YP_197024.1| succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Welgevonden]
 gi|81353045|sp|Q5HC25|SUCC_EHRRW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|57160962|emb|CAH57868.1| succinyl-CoA synthetase, beta subunit [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417438|emb|CAI26642.1| Succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 386

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+++ + V +GV++ S++    AI  +   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKQILKRFGISVPEGVIVHSLNEVNDAINKINSKVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +L    + I+ +LGSTL+T QT   G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVIVSRTLDEAKTAIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +V+R  G ++ I ST+GG+DIEEVA + P+K+    IDP+ G       +LC    L 
Sbjct: 111 SAIVNRKHGQISIIFSTEGGVDIEEVAANSPEKVVTCNIDPIFGFQGFHGRNLCFDSNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +YK   + D S +EINPLI   +G    LD+K++FDDNA+YRH +I 
Sbjct: 171 VDQTRKITSIAEKIYKTMLETDASQIEINPLIETSSGDFIALDAKMNFDDNAIYRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEIPEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q  V  AFKII SD +V GIL+NIFGGIMRCD++  GI++A++E+ IN+PLV+RL 
Sbjct: 291 GGASQQTVTEAFKIILSD-NVDGILVNIFGGIMRCDIIANGIIAAIQEIGINVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +L+  S LN+ITA DL +AA  IV+ VK
Sbjct: 350 GTNFELGKKLLDNSKLNIITAHDLSEAAYNIVNIVK 385


>gi|255065289|ref|ZP_05317144.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria sicca
           ATCC 29256]
 gi|261364254|ref|ZP_05977137.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria mucosa
           ATCC 25996]
 gi|298369259|ref|ZP_06980577.1| succinate-CoA ligase, beta subunit [Neisseria sp. oral taxon 014
           str. F0314]
 gi|255050710|gb|EET46174.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria sicca
           ATCC 29256]
 gi|288567496|gb|EFC89056.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria mucosa
           ATCC 25996]
 gi|298283262|gb|EFI24749.1| succinate-CoA ligase, beta subunit [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 388

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|150388321|ref|YP_001318370.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus metalliredigens
           QYMF]
 gi|189046876|sp|A6TKJ3|SUCC_ALKMQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|149948183|gb|ABR46711.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus metalliredigens
           QYMF]
          Length = 397

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K ++++Y + V +  +  +V  A  A   L   +  VK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDLGCEVIAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+   S    IL   LITKQTGP G  VN V +E+G  I +E YL
Sbjct: 58  -------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  VD T+  V  I S +GGMDIEEVA+  P KIFK  IDP IG+       L   + + 
Sbjct: 111 SCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGIN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +      N+Y+ F +KD S++EINPLI  +  ++  LD K+ FDDN+L RH +I 
Sbjct: 171 EACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVVALDCKVCFDDNSLCRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD++EED RE++A +++LSYI+L GNIGCMVNGAGLAMATMD+I  +GGAPANFLDVG
Sbjct: 231 KYRDLTEEDPREVQASKYDLSYISLSGNIGCMVNGAGLAMATMDMIDHFGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ SD  V GI +NIFGGIM+CDV+  GIL AV  + +++PLV+RLE
Sbjct: 291 GGATAEKVKEAFKILISDKKVAGIFVNIFGGIMKCDVIATGILQAVNALDLDVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  ++  S L+VIT   + + A+KIV  V G
Sbjct: 351 GTNVELGKEILKSSWLDVITVNSMAEGAEKIVALVNG 387


>gi|294339387|emb|CAZ87743.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Thiomonas sp. 3As]
          Length = 387

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 266/381 (69%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR++ VPV +G    SV  A +A + L GP+++VK+QIHA         
Sbjct: 1   MKIHEYQAKQLLREHGVPVPRGKPAFSVDEAVAAAQELGGPVWMVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G +V  + +EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARTLDEVRQLSLQILGMQLVTHQTGPAGQKVRRLLIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+       L   + + 
Sbjct: 111 AVLTDRATQKVAVMASSEGGMDIEEVAAKTPEKILKVFVDPLVGLQDAQGLELAAGIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             ++    D+F  LY+ + D D SL+EINPLI+  NG+++ LD+K + DDNAL+RH +I+
Sbjct: 171 LASQAQAIDVFKKLYQCYMDTDASLVEINPLILEGNGQIKALDAKFNIDDNALFRHPEIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E++A + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG+PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVQAHKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCD + +G+++A + V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLHNPHVKAILVNIFGGIMRCDTIAEGVIAASRTVGLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N +IG +++A+SGL +I+A
Sbjct: 351 GTNEEIGRKMLADSGLPIISA 371


>gi|322417830|ref|YP_004197053.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M18]
 gi|320124217|gb|ADW11777.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M18]
          Length = 385

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/392 (49%), Positives = 261/392 (66%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +P+ +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILNSFGIPIPRGRVALTADQVERAAKEMGGRC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G TL+T QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQEYAKELFGRTLVTPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     IAS +GGM+IEEVA   P+KI  L IDP +G+ S     +   L L 
Sbjct: 110 SITLDRSTSRYVLIASAEGGMEIEEVASKSPEKIHTLTIDPFLGLRSYQARHIALQLGLT 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLY+   DKD +L+EINPL+I + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVNLIQNLYRVCLDKDCALVEINPLVITRAGWLMAMDAKITFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L G+IGC+VNGAGLAMAT+D++K YGG PANFLDVG
Sbjct: 230 DMMDYSQLDPLEINAGKYDLAYIKLSGSIGCLVNGAGLAMATLDVLKEYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKGI +NIFGGIMRCDV+  GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+ V+ G RL+ ESGLNV  + +L DAA KIV
Sbjct: 350 GSQVEEGKRLLTESGLNVQCSDNLGDAASKIV 381


>gi|58616871|ref|YP_196070.1| succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Gardel]
 gi|75356991|sp|Q5FH54|SUCC_EHRRG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58416483|emb|CAI27596.1| Succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Gardel]
          Length = 386

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/396 (50%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+++ + V +GV++ S++    AI  +   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKQILKRFGISVPEGVIVHSLNEVNDAINKINSKVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +L    + I+ +LGSTL+T QT   G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVIVSRTLDEAKTAIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +V+R  G ++ I ST+GG+DIEEVA + P+K+    IDP+ G       +LC    L 
Sbjct: 111 SAIVNRKHGQISIIFSTEGGVDIEEVAANSPEKVVTCNIDPIFGFQGFHGRNLCFDSNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +YK   + D S +EINPLI   +G    LD+K++FDDNA+YRH +I 
Sbjct: 171 VDQTRKITSIAKKIYKTMLETDASQIEINPLIETSSGDFIALDAKMNFDDNAIYRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEIPEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q  V  AFKII SD +V GIL+NIFGGIMRCD++  GI++A++E+ IN+PLV+RL 
Sbjct: 291 GGASQQTVTEAFKIILSD-NVDGILVNIFGGIMRCDIIANGIIAAIQEIGINVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +L+  S LN+ITA DL +AA  IV+ VK
Sbjct: 350 GTNFELGKKLLDNSKLNIITAHDLSEAAYDIVNIVK 385


>gi|239818150|ref|YP_002947060.1| succinyl-CoA synthetase, subunit beta [Variovorax paradoxus S110]
 gi|239804727|gb|ACS21794.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus S110]
          Length = 388

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L K+ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILAKFGVPVPRGIPAYTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     EILG  L T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVKKLAGEILGMQLKTHQTGPEGQKVRRLYIEDGADINKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  +  DP  G+T E    + D + + 
Sbjct: 111 SAVTDRATQKVAFIASSEGGMDIEEVAHSSPEKIITVFADPEKGLTDEQAKQIADGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LY  + + D SL+EINPL     G++  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQTVDILKKLYTCYMETDASLVEINPLNRDSKGKVMALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED+ E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDAAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +V+ IL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNKNVEAILVNIFGGIMKCDTIATGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G +L+A+SGL +I+A  + DAAQK+V AVK
Sbjct: 351 GTNEVEGKKLLADSGLPIISADTMADAAQKVVAAVK 386


>gi|296135285|ref|YP_003642527.1| succinyl-CoA synthetase, beta subunit [Thiomonas intermedia K12]
 gi|295795407|gb|ADG30197.1| succinyl-CoA synthetase, beta subunit [Thiomonas intermedia K12]
          Length = 401

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 266/381 (69%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR++ VPV +G    SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQAKQLLREHGVPVPRGKPAFSVDEAIAAAQELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G +V  + +E+GADIL+E Y+
Sbjct: 52  -GGRGKGGGVKLARTLDEVRQLSLQILGMQLVTHQTGPAGQKVRRLLIEEGADILKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+       L   + + 
Sbjct: 111 AVLTDRATQKVAVMASSEGGMDIEEVAAKTPEKILKVFVDPLVGLQEAQGLELAAGIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             ++    D+F  LY+ + D D SL+EINPLI+  NG ++ LD+K + DDNAL+RH +I+
Sbjct: 171 LASQAQAIDVFKKLYQCYMDTDASLVEINPLILEGNGGIKALDAKFNIDDNALFRHPEIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EED  E++A + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG+PANFLDVG
Sbjct: 231 AMRDLDEEDPAEVQAHKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCD + +G+++A + V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLHNPHVKAILVNIFGGIMRCDTIAEGVIAASRTVGLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N +IG +++A+SGL +I+A
Sbjct: 351 GTNEEIGRKMLADSGLPIISA 371


>gi|295677589|ref|YP_003606113.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1002]
 gi|295437432|gb|ADG16602.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDSEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I+A  +++AAQK+V A  G
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEEAAQKVVAAASG 387


>gi|262369429|ref|ZP_06062757.1| succinyl-CoA synthetase subunit beta [Acinetobacter johnsonii
           SH046]
 gi|262315497|gb|EEY96536.1| succinyl-CoA synthetase subunit beta [Acinetobacter johnsonii
           SH046]
          Length = 388

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/397 (50%), Positives = 277/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +GV+ ++   A  A + + G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGVLATTPEEAVKAFEQIGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S        + I+G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSATEAAEYAKSIIGTNLVTYQTDSHGQPVNSVLVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLLPFQAREVAFKLNL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +         +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR  +I
Sbjct: 171 KDGQVNQFVKVMSAAYQAFIENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKDRVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+KIV AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKIVAAVK 387


>gi|108761542|ref|YP_631734.1| succinyl-CoA synthase subunit beta [Myxococcus xanthus DK 1622]
 gi|122981035|sp|Q1D6I9|SUCC_MYXXD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|108465422|gb|ABF90607.1| succinyl-CoA synthase, beta subunit [Myxococcus xanthus DK 1622]
          Length = 386

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/387 (50%), Positives = 270/387 (69%), Gaps = 16/387 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG--- 57
           M IHEYQ K + RKY VP  KG++  S + AE+A K L   + VVK+QIHAGGRGKG   
Sbjct: 1   MKIHEYQGKEIFRKYGVPTPKGILAVSANDAEAAAKELGTSVVVVKAQIHAGGRGKGGGV 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +  + PA++K                +++LG  L T QTGP G  V+ VY+E+G  I +E
Sbjct: 61  KLAKSPAEAK-------------ELAKQMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQE 107

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL + +DR +  + F+AS +GG++IEEVA+ +P+KI +  +DP +G        L   L
Sbjct: 108 LYLGVTLDRATSRITFMASREGGVEIEEVAEKHPEKILRESVDPAVGFQDFQGRKLAFGL 167

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L G            LY+ F D D SL+EINPL+I+K+G +  LD+K++FD+NALYRH 
Sbjct: 168 GLTGPTVNKFTQFCSALYRMFMDTDASLVEINPLVILKDGGVVALDAKVTFDENALYRHK 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+ E RD++EE+ REI+AK+ +L+YIALDGNIGCMVNGAGLAMATMD IKL GG+PANFL
Sbjct: 228 DLLEYRDLAEEEPREIQAKEWDLAYIALDGNIGCMVNGAGLAMATMDTIKLVGGSPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+++KV AAFK+I +D +VK +L+NIFGGIM+CDV+ +GI++A KEV++ +PLV+
Sbjct: 288 DVGGGANKEKVTAAFKLILADPAVKAVLVNIFGGIMKCDVIAEGIIAAAKEVQLKVPLVV 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDL 384
           RLEG NV+ G  L++ SGL +  A +L
Sbjct: 348 RLEGTNVEKGKELLSNSGLAITPADNL 374


>gi|293610893|ref|ZP_06693192.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826545|gb|EFF84911.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 388

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 280/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQINQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|254480793|ref|ZP_05094040.1| succinate-CoA ligase, beta subunit subfamily [marine gamma
           proteobacterium HTCC2148]
 gi|214039376|gb|EEB80036.1| succinate-CoA ligase, beta subunit subfamily [marine gamma
           proteobacterium HTCC2148]
          Length = 389

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L   Y +PV+KG  + +   A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFADYGLPVSKGYAVDTPLEAAEAADLIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +       LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKDEIREFASNWLGKNLVTYQTDENGQPVSKILVESCTDIAEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE VA++ P+KI +  +DPL+G        L   L L 
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIETVAEETPEKILRATVDPLVGPQPYQGRELAFQLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L + F DKD++L+EINPL+I   G L  LD+K+  D NALYR   ++
Sbjct: 171 GEQIKQFVKIFMGLAQMFIDKDLALIEINPLVITDEGNLHCLDAKLGVDSNALYRQPQLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDERESHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVALHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGQKVLADSGLNIIAATSLTDAAQQAVKAAGG 387


>gi|90406989|ref|ZP_01215179.1| succinyl-CoA synthetase subunit beta [Psychromonas sp. CNPT3]
 gi|90311860|gb|EAS39955.1| succinyl-CoA synthetase subunit beta [Psychromonas sp. CNPT3]
          Length = 387

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV KG+   S   A  A  TL G  +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFTEYGLPVPKGIACDSAEQAVDAATTLGGDKWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +     + LG  LIT QT   G  VN + VE  +DI  ELYL
Sbjct: 58  -------GGVKLVKNKNELREFAHQWLGKNLITYQTDEKGQPVNKLLVERCSDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG++IE VA+  P+ I  ++IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRASRRVTFMASTEGGVEIESVAEQTPELIHTVMIDPLVGAQAYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++LLEINPL++     L  LD K++ D NA+YR   + 
Sbjct: 171 GKQIGQFTKIFLGLSKMFHEKDLALLEINPLVVTATDDLICLDGKVTIDSNAMYRQKALF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED+REI A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI++L+GG PANFLDVG
Sbjct: 231 DMNDTSQEDAREIHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVQLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD+ V+ +L+NIFGGI+RCD++  G++ AV+EV +++P+++RLE
Sbjct: 291 GGATKERVTEAFKIILSDTKVEAVLVNIFGGIVRCDLIADGVIGAVQEVGVSVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES LN+I A  L DAA++ V AV G
Sbjct: 351 GNNAELGRKILAESDLNIIAATSLTDAAEQAVKAVGG 387


>gi|332526924|ref|ZP_08403017.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
 gi|332111366|gb|EGJ11350.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
          Length = 386

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/381 (49%), Positives = 257/381 (67%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR + VPV +G    +V  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRAHGVPVPRGYAAFTVQEALEAAQKLGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L+T QTGP G +V  + VE+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLAEVETLASQILGMQLVTHQTGPEGQKVRRLLVEEGADIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+T      L   + + 
Sbjct: 111 AALTDRATQKVALMASSEGGMDIEEVAHATPEKILKVFVDPLVGLTEAQARELAVGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +R    D+F  LY  +   D SL EINPLI+  +G ++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASRAQAVDVFQKLYACYMASDASLAEINPLILEGHGGIKALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K V + +PLV+R++
Sbjct: 291 GGASAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIAEGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N D+G +++A+SGL +I A
Sbjct: 351 GTNEDLGKKMLADSGLPIIAA 371


>gi|169794949|ref|YP_001712742.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii AYE]
 gi|184159272|ref|YP_001847611.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           ACICU]
 gi|213157646|ref|YP_002320444.1| succinyl-CoA synthase, beta subunit [Acinetobacter baumannii
           AB0057]
 gi|215482497|ref|YP_002324683.1| Succinyl-CoA synthetase beta chain(SCS-beta) [Acinetobacter
           baumannii AB307-0294]
 gi|239502282|ref|ZP_04661592.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB900]
 gi|260549008|ref|ZP_05823230.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter sp.
           RUH2624]
 gi|260557316|ref|ZP_05829532.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           baumannii ATCC 19606]
 gi|301346632|ref|ZP_07227373.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB056]
 gi|301510302|ref|ZP_07235539.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB058]
 gi|301596860|ref|ZP_07241868.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB059]
 gi|332854239|ref|ZP_08435259.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013150]
 gi|332866318|ref|ZP_08436923.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013113]
 gi|332872533|ref|ZP_08440502.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6014059]
 gi|226733920|sp|B0VEF2|SUCC_ACIBY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734310|sp|B7GXK7|SUCC_ACIB3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734311|sp|B7I6T2|SUCC_ACIB5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734312|sp|B2HXG0|SUCC_ACIBC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734400|sp|A3M887|SUCC_ACIBT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169147876|emb|CAM85739.1| succinyl-CoA synthetase beta chain [Acinetobacter baumannii AYE]
 gi|183210866|gb|ACC58264.1| Succinyl-CoA synthetase, beta subunit [Acinetobacter baumannii
           ACICU]
 gi|193078184|gb|ABO13131.2| succinyl-CoA synthetase beta chain [Acinetobacter baumannii ATCC
           17978]
 gi|213056806|gb|ACJ41708.1| succinyl-CoA synthase, beta subunit [Acinetobacter baumannii
           AB0057]
 gi|213986969|gb|ACJ57268.1| Succinyl-CoA synthetase beta chain(SCS-beta) [Acinetobacter
           baumannii AB307-0294]
 gi|260408176|gb|EEX01647.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter sp.
           RUH2624]
 gi|260409422|gb|EEX02724.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           baumannii ATCC 19606]
 gi|322509186|gb|ADX04640.1| sucC [Acinetobacter baumannii 1656-2]
 gi|323519214|gb|ADX93595.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           TCDC-AB0715]
 gi|325123209|gb|ADY82732.1| succinyl-CoA synthetase beta chain [Acinetobacter calcoaceticus
           PHEA-2]
 gi|332728164|gb|EGJ59552.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013150]
 gi|332734666|gb|EGJ65770.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013113]
 gi|332739219|gb|EGJ70077.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6014059]
          Length = 388

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 280/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|223937437|ref|ZP_03629342.1| succinyl-CoA synthetase, beta subunit [bacterium Ellin514]
 gi|223893988|gb|EEF60444.1| succinyl-CoA synthetase, beta subunit [bacterium Ellin514]
          Length = 401

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/402 (49%), Positives = 272/402 (67%), Gaps = 10/402 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKG 57
           MNIHEYQAK LL +Y V V  G V S+   A++  + L      L VVKSQIHAGGRGKG
Sbjct: 1   MNIHEYQAKQLLSQYGVAVPPGDVCSTADEAKAIAEKLFAKGEKLVVVKSQIHAGGRGKG 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            FK   +  +GGV++  +   V    + +LG  L+TKQTGP G  V+ + V     I +E
Sbjct: 61  TFK---SGFQGGVKLCKTADDVFEKAKAMLGQVLVTKQTGPEGRLVSKLLVAAAPAIKKE 117

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL++L+DR S     + ST+GG+DIEEVA+  P+KI K  IDP +G+       L   L
Sbjct: 118 LYLAVLLDRASSRPLVMVSTEGGVDIEEVAEKTPEKIVKETIDPAVGMMPYQARKLAAAL 177

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGR--LRVLDSKISFDDNAL 233
            ++G        L   +Y+ + + D +++EINPL I++  +G+  +  +D+K+  DDNAL
Sbjct: 178 GIKGDLINPAAKLLMGVYRTWWECDAAMVEINPLCIIEGPDGKDTIVAVDAKVGMDDNAL 237

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           YRH ++QE+RD++EE   EIEA + NL+YI LDG+I C+VNGAGLAMATMDII+ +GG P
Sbjct: 238 YRHKNVQEMRDLAEEAPLEIEASKFNLNYIKLDGSIACLVNGAGLAMATMDIIQHFGGNP 297

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA +++V AAFKII SD  VKGIL+NIFGGIM C+V+  GI++AV+E  + +
Sbjct: 298 ANFLDVGGGASKEQVTAAFKIILSDPHVKGILVNIFGGIMDCNVIATGIVAAVRETGLKL 357

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           PLV+RLEG NV+ G + + ESGL +I+   + DAAQK+V AV
Sbjct: 358 PLVVRLEGNNVEAGKKTLKESGLTIISGDSMSDAAQKVVKAV 399


>gi|262281282|ref|ZP_06059064.1| succinyl-CoA synthetase subunit beta [Acinetobacter calcoaceticus
           RUH2202]
 gi|299768992|ref|YP_003731018.1| succinyl-CoA synthetase subunit beta [Acinetobacter sp. DR1]
 gi|262257513|gb|EEY76249.1| succinyl-CoA synthetase subunit beta [Acinetobacter calcoaceticus
           RUH2202]
 gi|298699080|gb|ADI89645.1| succinyl-CoA synthetase subunit beta [Acinetobacter sp. DR1]
          Length = 388

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 280/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQISQFVKIMAAAYQAFVENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|16273116|ref|NP_439352.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae Rd
           KW20]
 gi|260581104|ref|ZP_05848925.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae RdAW]
 gi|1174473|sp|P45101|SUCC_HAEIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1574125|gb|AAC22850.1| succinyl-CoA synthetase, beta subunit (sucC) [Haemophilus
           influenzae Rd KW20]
 gi|260092233|gb|EEW76175.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae RdAW]
          Length = 389

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGGKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDRTS  V FIAS++GGM+IEEV ++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++   G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTPQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAESDVNILTAQSLQQAAELAVNAAKG 387


>gi|319796538|ref|YP_004158178.1| succinyL-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
 gi|315599001|gb|ADU40067.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
          Length = 388

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L K+ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILAKFGVPVPRGIPAYTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     EILG  L T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVKKLAGEILGMQLKTHQTGPEGQKVRRLYIEDGADINKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  +  DP  G+T E    + D + + 
Sbjct: 111 SAVTDRATQKVAFIASSEGGMDIEEVAHSSPEKIITVFADPEKGLTDEQAKQIADGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LY  + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQTVDILKKLYACYMETDASLVEINPLNRDSKGNVMALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED+ E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDAAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +V+ IL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNKNVEAILVNIFGGIMKCDTIATGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G +L+A+SGL +I+A  + DAAQK+V AVK
Sbjct: 351 GTNEVEGKKLLADSGLPIISADTMADAAQKVVAAVK 386


>gi|238898946|ref|YP_002924628.1| succinyl-CoA synthetase, beta subunit [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|259511785|sp|C4K7D7|SUCC_HAMD5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229466706|gb|ACQ68480.1| succinyl-CoA synthetase, beta subunit [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 388

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +PV KG V  S   AE A   L G L+V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELFARRGLPVPKGYVCRSAGEAEKATTELGGDLWVAKCQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 57  ------SGGVKLCNNPQDVSAFAEQWLGKNLVTYQTDLQGQPVHHILVEAATDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I K+ IDPL G        L   L L 
Sbjct: 111 GAVIDRSSSRVVFMASTEGGVEIEKVAEKTPHLIHKVTIDPLTGPQPFQGRELAFQLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F NL K F + D++LLEINPL+I K   L  LD+K++ D NALYR  +++
Sbjct: 171 GKKVSQFSQIFMNLAKLFLECDLALLEINPLVITKKEELICLDAKLTVDGNALYRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ DV++ED+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMD++KLYG  PANFLDVG
Sbjct: 231 QIHDVTQEDAREAHAAQFELNYVALEGNIGCMVNGAGLAMGTMDMVKLYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK IL+NIFGGI+RCD++  GI++AV EV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAILVNIFGGIVRCDLIADGIIAAVAEVGMQIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G + +++SGLN+I A  L  AA++I  AVK
Sbjct: 351 GNNAKPGAKKLSDSGLNIIAANSLTHAAKQIAAAVK 386


>gi|226951554|ref|ZP_03822018.1| succinyl-CoA synthetase beta chain [Acinetobacter sp. ATCC 27244]
 gi|294651211|ref|ZP_06728539.1| succinyl-CoA ligase subunit beta [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837696|gb|EEH70079.1| succinyl-CoA synthetase beta chain [Acinetobacter sp. ATCC 27244]
 gi|292822864|gb|EFF81739.1| succinyl-CoA ligase subunit beta [Acinetobacter haemolyticus ATCC
           19194]
          Length = 388

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 280/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQVSQFVKIMGAAYQAFVENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|194335891|ref|YP_002017685.1| succinyl-CoA synthetase, beta subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|226734969|sp|B4SEH6|SUCC_PELPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|194308368|gb|ACF43068.1| succinyl-CoA synthetase, beta subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 392

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/399 (47%), Positives = 263/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV----HAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V +G+V  S      AAE     L  P+ V+K+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPRGIVAYSPEEAKQAAEQLFDELGCPVVVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +  +    +++G TLIT QTGP G  V  V VE+G +I +
Sbjct: 61  A----------GGVKLAKSPEESLDIAHQLIGMTLITHQTGPEGKEVRRVLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P+++ K+ IDPL G+           
Sbjct: 111 EFYVGITLDRSTSKNVLMVSTEGGMEIEKVAEETPERLLKIQIDPLFGMQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +  +    LY A+   D +L EINPL++ K G++  LD+KI+FDDNAL+RH
Sbjct: 171 LGLKGEQFRNAVNFITALYNAYISIDAALAEINPLVVTKEGKVLALDAKINFDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD +EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KEFHELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A K++ +++P++
Sbjct: 291 LDVGGSASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIDLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N  I  +++ +SGLN+I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNAPIAQKMLDDSGLNLIAAKGLRDAAQKVQEAL 389


>gi|116049533|ref|YP_791663.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|122258642|sp|Q02K73|SUCC_PSEAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115584754|gb|ABJ10769.1| succinyl-CoA synthetase beta subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 388

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 272/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K+ IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKVTIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|224373252|ref|YP_002607624.1| succinyl-CoA synthetase subunit beta [Nautilia profundicola AmH]
 gi|254778446|sp|B9L5I6|SUCC_NAUPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|223589963|gb|ACM93699.1| succinyl-CoA synthetase beta chain [Nautilia profundicola AmH]
          Length = 390

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/387 (50%), Positives = 255/387 (65%), Gaps = 11/387 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + RKY VP  +G V  +   A    + L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIFRKYGVPTPRGGVAFTGPEARRVAEELGGNLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     E+LG TL+T QTGP G  V  VY+E+GADI  ELYL
Sbjct: 58  -------GGVKLAKSLDEVEKIAEEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKDELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AST+GGM+IEEVA+  P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIIKVAIDPAIGFQPFHARKLAFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              + +       LY  + D D  ++EINPLI   +G+   LD+K+ FDDNALY+H +I 
Sbjct: 171 KDEQREFIKFASALYNVYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYKHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EE+  E+EAK++ LSYI LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLDEEEPTEVEAKKYGLSYIKLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D VA  F+II SD +VK I +NIFGGI+RCD +  GIL A ++V++N+P+++RL+
Sbjct: 291 GGANPDTVAKGFEIILSDPNVKSIFVNIFGGIVRCDRIANGILQATEKVEVNVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDD 386
           G N +    ++  + + N+I A +L D
Sbjct: 351 GTNAEEAAEILRNANIKNIIPAENLKD 377


>gi|148826195|ref|YP_001290948.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae
           PittEE]
 gi|229846227|ref|ZP_04466339.1| transcriptional regulator CysB [Haemophilus influenzae 7P49H1]
 gi|189030245|sp|A5UCR4|SUCC_HAEIE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148716355|gb|ABQ98565.1| transcriptional regulator CysB [Haemophilus influenzae PittEE]
 gi|229811231|gb|EEP46948.1| transcriptional regulator CysB [Haemophilus influenzae 7P49H1]
          Length = 389

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGMDIEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KI+ DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKIAVDDNALFRHKDLS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILAESDVNILTAHSLQQAAELAVNAAKG 387


>gi|261868411|ref|YP_003256333.1| succinyl-CoA synthetase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413743|gb|ACX83114.1| succinyl-CoA synthetase beta chain (SCS-beta) [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 389

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++P+ +G+   +   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFAEYDLPICRGIACKTADEAAEAIKQLKGDVWVTKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V + + + LG  L+T QT   G  +N +YVE+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFVDKWLGQRLVTFQTDANGQPINIIYVEETVNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS  GGMDIEEVA   P+ + K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRASQKVVFMASAAGGMDIEEVAAKTPELLHKVALDPLVGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F ++D+SLLEINPL++ K G+L  LD+KI  D NALYR LD+ 
Sbjct: 171 GDQINQFTHIFTQLAKMFVERDLSLLEINPLVVTKEGKLSCLDAKIVVDSNALYRQLDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+++ D+RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 TMHDITQSDAREALAELHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV +V +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNQVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGLN+I A  L DAA + + A  G
Sbjct: 351 GNNAPLGREILANSGLNIIAAKTLTDAAVESIKAANG 387


>gi|163752206|ref|ZP_02159408.1| succinyl-CoA synthetase subunit beta [Shewanella benthica KT99]
 gi|161327887|gb|EDP99065.1| succinyl-CoA synthetase subunit beta [Shewanella benthica KT99]
          Length = 388

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVDIETVAENTPELIHKAIIDPLTGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KIS D NALYR   I+
Sbjct: 171 PTQMKQFIKIFMGLAKMFEDHDFALLEINPLVITTEGNLHCLDGKISIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+++RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A S L++I A  L DAAQ++V A +G
Sbjct: 351 GTNAELGREVLASSNLDIIAATSLTDAAQQVVKAAEG 387


>gi|319897338|ref|YP_004135534.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           F3031]
 gi|317432843|emb|CBY81208.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           F3031]
          Length = 389

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAESDVNILTAQSLQQAAELAVNAAKG 387


>gi|15596785|ref|NP_250279.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa PAO1]
 gi|107101021|ref|ZP_01364939.1| hypothetical protein PaerPA_01002051 [Pseudomonas aeruginosa PACS2]
 gi|218892455|ref|YP_002441322.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa
           LESB58]
 gi|296390037|ref|ZP_06879512.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa PAb1]
 gi|313106602|ref|ZP_07792828.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa 39016]
 gi|12230960|sp|P53593|SUCC_PSEAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734974|sp|B7UVD3|SUCC_PSEA8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|9947552|gb|AAG04977.1|AE004587_1 succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa PAO1]
 gi|218772681|emb|CAW28466.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa LESB58]
 gi|310879330|gb|EFQ37924.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa 39016]
          Length = 388

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|49088588|gb|AAT51586.1| PA1588 [synthetic construct]
          Length = 389

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|152979225|ref|YP_001344854.1| succinyl-CoA synthetase, beta subunit [Actinobacillus succinogenes
           130Z]
 gi|189046873|sp|A6VPM2|SUCC_ACTSZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150840948|gb|ABR74919.1| succinyl-CoA synthetase, beta subunit [Actinobacillus succinogenes
           130Z]
          Length = 386

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++PV+KG    +V  A  AI+ L G  +V K Q++AGGRGK    
Sbjct: 1   MNLHEYQSKQIFAQYDLPVSKGYPCETVEQALKAIEKLGGDQWVAKCQVYAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V SS   V S     LG  L+T QT   G  VN +Y+E  A + +ELY+
Sbjct: 58  -------GGVKVVSSEAEVRSFFERFLGKRLVTLQTDAQGQPVNTIYLEACAAVKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  + F+AST+GG++IEEVA+  P  + K+ IDP +G        L   L L 
Sbjct: 111 GMVIDRANRRIVFMASTEGGVNIEEVAEKTPHLLHKVAIDPFMGAQPFQGRELACKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SL+EINPL+I++N  L  LD+KI  D NALYRH D++
Sbjct: 171 GKQIHQFAHIFCRLSKMFSEKDLSLVEINPLVILQNDDLHCLDAKIVVDGNALYRHADLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA+   L+Y+ALDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 SLQDPSQEDPREAEAEALGLNYVALDGNIGCMVNGAGLAMGTMDIIKLQGGLPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +++VA AFKII SD++VK IL+NIFGGI+RCD++ +GI++AV EV + +P+V+RLE
Sbjct: 291 GSATKERVAGAFKIILSDTNVKAILVNIFGGIVRCDLIAEGIVAAVNEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G  ++A+SGLN+I A  L DAA + V+A K
Sbjct: 351 GNNAERGREILAQSGLNIIAAESLKDAAVQAVNAAK 386


>gi|325520207|gb|EGC99381.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. TJI49]
          Length = 388

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I+A  +++AAQK+V A +G
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEEAAQKVVAAAEG 387


>gi|78188316|ref|YP_378654.1| succinyl-CoA synthetase subunit beta [Chlorobium chlorochromatii
           CaD3]
 gi|123580399|sp|Q3ATR4|SUCC_CHLCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78170515|gb|ABB27611.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           chlorochromatii CaD3]
          Length = 390

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/399 (47%), Positives = 259/399 (64%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV----HAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S      AAE         + VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVTVPKGIVAYSADEAKQAAEQLFAETGSSVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +      R+++G TLIT QTGP G  V+ + +E+G  I +
Sbjct: 61  A----------GGVKLAKSPEEAFEIARQMIGMTLITHQTGPEGKVVSRLLIEEGMGIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE VA++ P+K+ K+ IDPL G+           
Sbjct: 111 EFYVGITLDRATSRNVLMVSTEGGMEIETVAEETPEKLLKIQIDPLFGMQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +  +    LYKA+   D S+ EINPL++   G++  LD+KI+FDDNALYRH
Sbjct: 171 LGLEGEQFRNAVNFITALYKAYTSIDASVAEINPLVVTSEGKVIALDAKINFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMDII+L GG PANF
Sbjct: 231 KEYMELRDTSEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    V   FKII SD +V+ IL+NIFGGI+RCD +  GI+ A K++ +++P++
Sbjct: 291 LDVGGTASPQTVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIMEAAKKMDLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N  I  +++ ESGL++I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNASIAQQMLDESGLSLIAAKGLRDAAQKVQEAL 389


>gi|152985102|ref|YP_001349040.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa PA7]
 gi|189081769|sp|A6V7K5|SUCC_PSEA7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150960260|gb|ABR82285.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa PA7]
          Length = 388

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGGEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|320177271|gb|EFW52277.1| Succinyl-CoA ligase [ADP-forming] beta chain [Shigella dysenteriae
           CDC 74-1112]
          Length = 388

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/397 (50%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ PQ I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R LD++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQLDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+SAV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIISAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|254251508|ref|ZP_04944826.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158]
 gi|124894117|gb|EAY67997.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158]
          Length = 388

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA   P+ I K+ ++P  G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAAKTPEAIHKVAVEPSKGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I+A  +++AAQK+V A +G
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEEAAQKVVAAAEG 387


>gi|225850685|ref|YP_002730919.1| succinyl-CoA synthetase subunit beta [Persephonella marina EX-H1]
 gi|254778447|sp|C0QQH3|SUCC_PERMH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|225645431|gb|ACO03617.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Persephonella marina EX-H1]
          Length = 388

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/393 (47%), Positives = 264/393 (67%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  +Y +PV KG    +V  A  A + L     VVK+QIHAGGRGK    
Sbjct: 1   MKVHEHQAKEIFARYGLPVPKGYPAFTVEEAVEAAQQLGKFPVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++L  V     E+LG TL+T QTGP G  V+ +Y+E+G +I +E Y+
Sbjct: 58  -------GGVKLANNLDEVQKYAAELLGKTLVTFQTGPEGLPVSRIYIEEGTNIDKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+   +  +AS++GGM+IEEVA   P+ I   +IDP +G+       +   L L 
Sbjct: 111 AITLDRSKSKLIIMASSEGGMEIEEVAAKNPEAIITEVIDPFLGLRPYQAREIALKLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF  LY+ +  +D S++EINPL++ K G + +LD+K+ FDDNAL+RH DI 
Sbjct: 171 KNLLNKAAGLFVKLYELYMKEDASMVEINPLVLTKEGNIVILDAKVDFDDNALFRHPDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++E   E++AKQ+NL+YI LDGNI CMVNGAGLAMATMD IKL GG PANFLDVG
Sbjct: 231 EMEDPTQESELEVKAKQYNLNYIKLDGNIACMVNGAGLAMATMDTIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ +++A AFKII SD +VK I INIFGGI+RCD L +GI+ A KEV  ++P+++R+E
Sbjct: 291 GSANAEQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIIQASKEVNPHVPIIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV++G +++AESGL++I A  + + A+K V 
Sbjct: 351 GTNVELGKKMLAESGLDLIPADTMWEGAKKAVE 383


>gi|50085913|ref|YP_047423.1| succinyl-CoA synthetase subunit beta [Acinetobacter sp. ADP1]
 gi|77416575|sp|Q6F8L4|SUCC_ACIAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49531889|emb|CAG69601.1| succinyl-CoA synthetase beta chain [Acinetobacter sp. ADP1]
          Length = 388

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/398 (49%), Positives = 276/398 (69%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY V V +G++  S   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGVSVQEGILARSAEEAVAAFEQLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +       +++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSKEEAADYANQLIGTNLVTYQTDANGQPVNSVLVCEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       L    Y+AF + D +L EINPL + +NG +  +D+KI  D NALYR  +I
Sbjct: 171 KDKQIGQFVKLMAGAYQAFVENDFALFEINPLSVRENGDILAVDAKIGIDSNALYRLPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD S+E+ RE++A +  L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AASRDKSQENERELKASEFELNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N ++G +++ ESGL + +A  L DAA+KIV AVKG
Sbjct: 351 EGNNAELGAKILDESGLKLTSANGLSDAAEKIVAAVKG 388


>gi|119945910|ref|YP_943590.1| succinyl-CoA synthetase, beta subunit [Psychromonas ingrahamii 37]
 gi|189081774|sp|A1SWX6|SUCC_PSYIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119864514|gb|ABM03991.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychromonas
           ingrahamii 37]
          Length = 388

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L R+Y +PV +G+   +   A SA   + G  +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFREYGLPVPQGIACDTAEEAVSAASQIGGDKWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV + S+   +     + LG  L+T QT   G  VN + VE  +DI  ELYL
Sbjct: 58  -------GGVELVSTKDGLREFAHKWLGKNLVTFQTDANGQPVNKLLVESCSDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG++IE+VA++ P+ I   +IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRASQRVTFMASTEGGVEIEKVAEETPELIHTAMIDPLVGAQAYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F +KD+SLLEINPL++     L  LD KIS D NA+YR   + 
Sbjct: 171 GKQIGQFTKIFLGLATLFEEKDLSLLEINPLVVTAQDDLICLDGKISIDSNAMYRQKALH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +++D RE+ A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AINDTTQDDEREMHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVHLHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  G++ AV EV + +P+++RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGVIGAVAEVGVTVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGLN+I A  L DAA++ V AV G
Sbjct: 351 GNNADLGRKILAESGLNIIAAASLTDAAEQAVKAVGG 387


>gi|270157991|ref|ZP_06186648.1| succinyl-CoA synthetase subunit beta [Legionella longbeachae
           D-4968]
 gi|269990016|gb|EEZ96270.1| succinyl-CoA synthetase subunit beta [Legionella longbeachae
           D-4968]
          Length = 397

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/386 (51%), Positives = 257/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  KYN+PV  G V  SV  A      L    +VVK+Q+HAGGRGK    
Sbjct: 12  MNLHEYQAKQLFAKYNLPVPNGQVAYSVDDALQVASQLSTNRWVVKAQVHAGGRGKA--- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V ++   + S ++ +LG+ L+T QT   G  VN V +E+  DI RELYL
Sbjct: 69  -------GGVKVVANKDELASVVKSLLGTRLVTYQTDAQGQPVNAVLIEETCDIGRELYL 121

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA++ P KIFK+++DPL+GV           L LQ
Sbjct: 122 GAVVDRATRRVVIMASTEGGVEIEKVAEETPDKIFKIIVDPLVGVMPFQCREAGFKLGLQ 181

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL++ ++G+L  LD KI+ D NALYR   ++
Sbjct: 182 DDQIKQFTHLMMGLGKMFVECDLSLLEINPLVVSQSGQLICLDGKINIDGNALYRQPQLK 241

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 242 SLRDASQEDERENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGDPANFLDVG 301

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 302 GGATKERVSEALKIIISDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 361

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N  +G  ++ +S LNVI A  L D
Sbjct: 362 GNNAQLGADILNKSDLNVIAATSLTD 387


>gi|293392046|ref|ZP_06636380.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952580|gb|EFE02699.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 389

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++P+ +G+   +   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFAEYDLPICRGIACKTADEAAEAIKQLKGDVWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   + LG  L+T QT   G  +N +YVE+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFADKWLGQRLVTFQTDANGQPINIIYVEETVNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS  GGMDIEEVA   P+ + K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRASQKVVFMASAAGGMDIEEVAAKTPELLHKVALDPLVGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F ++D+SLLEINPL++ K G+L  LD+KI  D NALYR LD+ 
Sbjct: 171 GDQINQFTHIFTQLAKMFVERDLSLLEINPLVVTKEGKLSCLDAKIVVDSNALYRQLDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+++ D+RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 TMHDITQSDAREALAELHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV +V +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNQVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAPLGREILANSGLNIIAAKTLTDAAVESVKAANG 387


>gi|289163743|ref|YP_003453881.1| succinyl-CoA synthetase, beta subunit [Legionella longbeachae
           NSW150]
 gi|288856916|emb|CBJ10730.1| succinyl-CoA synthetase, beta subunit [Legionella longbeachae
           NSW150]
          Length = 386

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/386 (51%), Positives = 257/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  KYN+PV  G V  SV  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAKYNLPVPNGQVAYSVDDALQVASQLSTNRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V ++   + S ++ +LG+ L+T QT   G  VN V +E+  DI RELYL
Sbjct: 58  -------GGVKVVANKDELASVVKSLLGTRLVTYQTDAQGQPVNAVLIEETCDIGRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA++ P KIFK+++DPL+GV           L LQ
Sbjct: 111 GAVVDRATRRVVIMASTEGGVEIEKVAEETPDKIFKIIVDPLVGVMPFQCREAGFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL++ ++G+L  LD KI+ D NALYR   ++
Sbjct: 171 DDQIKQFTHLMMGLGKMFVECDLSLLEINPLVVSQSGQLICLDGKINIDGNALYRQPQLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 SLRDASQEDERENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIIISDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N  +G  ++ +S LNVI A  L D
Sbjct: 351 GNNAQLGADILNKSDLNVIAATSLTD 376


>gi|73666781|ref|YP_302797.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ehrlichia canis
           str. Jake]
 gi|123615114|sp|Q3YSV6|SUCC_EHRCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|72393922|gb|AAZ68199.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ehrlichia canis
           str. Jake]
          Length = 386

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/398 (52%), Positives = 266/398 (66%), Gaps = 15/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L ++ V V KG ++ S+   + AI  L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKHILSRFGVSVPKGAIVHSLSEVDDAISKLHSKVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +     + I+ +LGSTL+T QT   G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVVVCRTSDEAKASIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC--DMLE 178
           S +V+R    V+ I ST+GG+DIEEVA   P+K+    IDPL G  S    +LC    L 
Sbjct: 111 SAIVNRKQSQVSIIFSTEGGVDIEEVASTSPEKVIVCNIDPLFGFQSFHGRNLCFDSNLS 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L    +I   D+   +YK     D + +EINPL+   +G    LD+KI+FDDNALYRH D
Sbjct: 171 LDQTRKI--SDIAEKIYKVMLSTDANQVEINPLVETSSGNFIALDAKINFDDNALYRHPD 228

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQELRD  EE   EIEA ++ L+YI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLD
Sbjct: 229 IQELRDYDEEIKEEIEASKYGLNYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLD 288

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA Q  V  AFKII SD  V GIL+NIFGGIMRCD++  GI++A++E++IN+PLV+R
Sbjct: 289 VGGGASQKTVTEAFKIILSD-KVDGILVNIFGGIMRCDIIANGIIAAIEEIRINVPLVVR 347

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L G N ++G +L+ +S LN+ITA DL +AA  IV+ VK
Sbjct: 348 LSGTNFELGKKLLDDSSLNIITANDLSEAAYNIVNIVK 385


>gi|309973340|gb|ADO96541.1| Succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           R2846]
          Length = 389

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMNIEEVAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SL+E+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|332284600|ref|YP_004416511.1| Succinyl-CoA synthetase beta chain [Pusillimonas sp. T7-7]
 gi|330428553|gb|AEC19887.1| Succinyl-CoA synthetase beta chain [Pusillimonas sp. T7-7]
          Length = 386

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/381 (51%), Positives = 260/381 (68%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+K+ V V +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKKFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  L+T QTGP G +V  +Y+E+GADI +E YL
Sbjct: 52  -GGRGKGGGVKLGRSLDEVRQLSSEILGMQLVTHQTGPEGQKVGRLYIEEGADIQQEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  ++IDPL G T  D  +L   + + 
Sbjct: 111 SAVTDRATQKVAFIASSEGGMDIEEVAHSSPEKIITVMIDPLKGFTQADGETLAKGVGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LY  + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSVAQFIDVCQKLYACYMETDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD++EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 EYRDLAEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ S+  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLSNEGVKAILVNIFGGIMRCDVIAEGVIAACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N ++G +L+AESGL +I+A
Sbjct: 351 GTNEELGKKLLAESGLPIISA 371


>gi|288941230|ref|YP_003443470.1| succinyl-CoA synthetase subunit beta [Allochromatium vinosum DSM
           180]
 gi|288896602|gb|ADC62438.1| succinyl-CoA synthetase, beta subunit [Allochromatium vinosum DSM
           180]
          Length = 402

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/386 (51%), Positives = 258/386 (66%), Gaps = 12/386 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK LLR+  + V  GV++    AA  A   L G  + VK+QIH+GGRGK    
Sbjct: 1   MNLHEFQAKQLLRERGLAVPDGVLVERPEAARDACVQLGGTRWAVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S +   S+ R +LGS L+T Q+GP G  V  V +E    I RELYL
Sbjct: 58  -------GGVVLVDSPEQAESETRRLLGSRLVTLQSGPDGLPVGSVLIERPTAIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  + F+AS  GGMDIE VA + P++I K+ + P++G        L   L L 
Sbjct: 111 SLLVDRASERLLFVASAAGGMDIETVAAETPERILKVALHPVVGFQPYKARRLGFGLGLD 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +++I   G L   LY+ F D D SL+EINPL++   G L  LD+KI+ DDNAL RH  +
Sbjct: 171 -ESQIKALGTLMDGLYRLFVDTDASLIEINPLVVTDTGELLALDAKITLDDNALMRHPAL 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+ED RE  A+ H+L+YI+LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 230 AALRDPSQEDPREAAARAHDLNYISLDGNIGCMVNGAGLAMATMDLIKLQGGRPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +VA AFK+I SD  V  IL+NIFGGI+RCD++ +GI+ AV+EV +++P+V+RL
Sbjct: 290 GGGATAARVAEAFKLILSDPKVASILVNIFGGIVRCDLIAEGIIQAVREVGVSVPIVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLD 385
           EG N   G +L+A+SGL + TA +LD
Sbjct: 350 EGTNAPQGLQLLADSGLALQTAGELD 375


>gi|254428177|ref|ZP_05041884.1| succinyl-CoA synthetase, beta subunit subfamily [Alcanivorax sp.
           DG881]
 gi|196194346|gb|EDX89305.1| succinyl-CoA synthetase, beta subunit subfamily [Alcanivorax sp.
           DG881]
          Length = 389

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+ G    +     +  K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFADYGLPVSTGFACDTPEEVAAKAKEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDTPEDAAAFAKQWLGKNLVTFQTDEHGQPVSKILVETCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V F+AST+GG+DIE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 SAVLDRASRRVVFMASTEGGVDIETVAEETPEKILKAEIDPLVGAQPYQAREIAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F DKD++L+E+NPL+I   G L  LD+KI+ D +ALYRH DI+
Sbjct: 171 GKQVNQFAKIFVGLAKLFIDKDLALIEVNPLVITDEGDLHCLDAKINVDGSALYRHPDIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+ED RE  A + +L+Y+ALDGNIGCMVNGAGLAM TMD++KL GGAPANFLDVG
Sbjct: 231 ALDDPSQEDERERRAAEWDLNYVALDGNIGCMVNGAGLAMGTMDLVKLKGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VKG+L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDQVKGVLVNIFGGIVRCDLIAEGIIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++ +AESG+N+I A   DDAA+++V AV G
Sbjct: 351 GNNAELGSQKLAESGMNIIAAQSFDDAAEQVVKAVGG 387


>gi|114778147|ref|ZP_01453034.1| ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain
           [Mariprofundus ferrooxydans PV-1]
 gi|114551565|gb|EAU54119.1| ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain
           [Mariprofundus ferrooxydans PV-1]
          Length = 388

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/385 (50%), Positives = 256/385 (66%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +    G++ ++V  A +A   L G ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKAVLKRFGISTPSGILANTVAEAVAAAHDLGGDIWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S++ V      +LG+TL+T QTG  G +V+ +Y+E G DI  E YL
Sbjct: 58  -------GGVRLCRSIEEVEQSASALLGATLVTHQTGSEGKQVHKIYIEQGVDIAHEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ S  GGMDIE+VA   P++I    +D   G+   D A++ D L L 
Sbjct: 111 SLLVDREAEAVAFVVSPAGGMDIEQVAATAPEQIHSRAVDAGTGLVDADYAAMIDGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A      L   LY+AF + D SLLE+NPLI    G L  LD+K++ DDNALYR  D+ 
Sbjct: 171 GRAAKAFPVLADALYRAFTESDCSLLELNPLIETGAGELIALDAKMAIDDNALYRQPDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED RE EA Q  L+YIALDG IGCMVNGAGLAM TMDII+L G  PANFLDVG
Sbjct: 231 ALRDTDEEDPRETEAVQFGLNYIALDGRIGCMVNGAGLAMGTMDIIQLKGDRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   D V  AFK++ SD  VK +L+NIFGGI+RCD++  G+L A+K   + +P++MRL 
Sbjct: 291 GGVTVDAVCEAFKLLFSDRHVKAVLVNIFGGIVRCDLISLGLLEAIKTHPMRVPVIMRLV 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G ++I ++GL+V  A DLD
Sbjct: 351 GTNEELGKQIIRDAGLDVRWATDLD 375


>gi|34496530|ref|NP_900745.1| succinyl-CoA synthetase subunit beta [Chromobacterium violaceum
           ATCC 12472]
 gi|81656532|sp|Q7NZ47|SUCC_CHRVO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|34102384|gb|AAQ58750.1| succinyl-CoA synthetase, beta subunit [Chromobacterium violaceum
           ATCC 12472]
          Length = 390

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/399 (49%), Positives = 272/399 (68%), Gaps = 11/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +Y +PV +G++  S   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLSRYGLPVQQGILAKSPEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +      + ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSREEAAEVAKTLIGTNLVTYQTDAAGQPVNSVLVCEDMYPVQRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR S  V F+ ST+GG++IE+VA++ P+KI K+ +DPL+G+           L L
Sbjct: 111 LGAVVDRGSQRVVFMVSTEGGVEIEKVAEETPEKIIKIEVDPLVGMQPFQARDAAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G        L    Y+AF + D +L E+NPL + +NG L  +D KI+ D NALYRH ++
Sbjct: 171 SGAQVAAFSKLMLGSYQAFIENDFALFEVNPLALRENGELACVDGKINLDSNALYRHPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 LAQRDKSQENEREVKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D+SV+G+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILADTSVQGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           EG N ++G +++ ESGL + +A  L+DAA+KIV AVK V
Sbjct: 351 EGNNAELGAKILDESGLKLTSAQGLNDAAEKIVAAVKAV 389


>gi|329124073|ref|ZP_08252620.1| succinyl-CoA ligase subunit beta [Haemophilus aegyptius ATCC 11116]
 gi|327467498|gb|EGF12996.1| succinyl-CoA ligase subunit beta [Haemophilus aegyptius ATCC 11116]
          Length = 389

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGVTQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAESDVNILTAQSLQQAAELAVNAAKG 387


>gi|169632627|ref|YP_001706363.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii SDF]
 gi|226734313|sp|B0VSL0|SUCC_ACIBS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169151419|emb|CAP00150.1| succinyl-CoA synthetase beta chain [Acinetobacter baumannii]
          Length = 388

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 279/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S + VI     I+ + L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIRTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|83647429|ref|YP_435864.1| succinyl-CoA synthetase subunit beta [Hahella chejuensis KCTC 2396]
 gi|123531731|sp|Q2SD35|SUCC_HAHCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83635472|gb|ABC31439.1| Succinyl-CoA synthetase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 388

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/384 (49%), Positives = 258/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV+KG    S   A SA  ++ G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFADYGLPVSKGFACESAQEAMSAADSIGGSQWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKLVSSKEEIKAFAEKWLGHNLVTYQTDEKGQPVNKILVESCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  + F+AST+GG++IE+VA++ P+KI K +IDPL+G        L   L L 
Sbjct: 111 GAVMDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAVIDPLVGAQPYQARELAFALGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D++LLE+NPL+I K G L  LD+K+  D NALYR   I+
Sbjct: 171 SDQVKQFTKIFLGLAKLFQDLDLALLEVNPLVITKGGNLHCLDAKVVVDGNALYRQPRIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 DMHDPSQEDPREAHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + +A+SGLN+I A  L
Sbjct: 351 GNNAELGAKKLADSGLNIIAAESL 374


>gi|88860191|ref|ZP_01134830.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas tunicata
           D2]
 gi|88818185|gb|EAR28001.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas tunicata
           D2]
          Length = 388

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/386 (49%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGFACDTPQEAAEAADKIGGNMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +    +  LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKEEIKEFAQHWLGKNLVTYQTDANGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K +IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRGSRKVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I + G L  LD KI  D NALYR   I+
Sbjct: 171 PDQMKQFTKIFMGLAKMFNDFDFALLEINPLVITEQGNLHCLDGKIGVDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE +A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMRDPSQEDEREAQAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A SGL++I A  L D
Sbjct: 351 GTNAELGRQVLANSGLDIIAAESLTD 376


>gi|330843612|ref|XP_003293744.1| succinate-CoA ligase (ADP-forming) [Dictyostelium purpureum]
 gi|325075897|gb|EGC29733.1| succinate-CoA ligase (ADP-forming) [Dictyostelium purpureum]
          Length = 436

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/393 (48%), Positives = 267/393 (67%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQA+ +++ + +   KG V  +   AE   + L     VVK+QI AGGRGKG F 
Sbjct: 26  LNVHEYQAQKMMKAFGIDCPKGNVADTPEEAEKIAEVLGTQDLVVKAQILAGGRGKGIFT 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV + SS + + +  ++++G TL+TKQTGP G  V+ VY+ +   + +E+Y 
Sbjct: 86  ---SGLKGGVHLCSSPEEIKNYAKQMIGHTLVTKQTGPDGKVVHQVYITERHFLRKEMYF 142

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    +AS QGG+DIE VA+D P  IFK  ID  IGV  E  A L + L   
Sbjct: 143 AILMDRKAGGPVMVASPQGGVDIEAVARDTPSAIFKEPIDINIGVKPEQTARLAEKLGFS 202

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINP     +G +  +D+K++FDDN+ +RH +I 
Sbjct: 203 KKNIEKAQDQMKKLYDFFIKNDCTLVEINPFAETASGEVLCMDAKLNFDDNSSFRHKEIF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE++A +++L+YI L+GNIGC+VNGAGLAMATMDIIKLYGG+PANFLDVG
Sbjct: 263 ALRDKSQEDPREVKAAEYDLNYIGLEGNIGCLVNGAGLAMATMDIIKLYGGSPANFLDVG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD +VK IL+NIFGGIM+CD++  GI++AVKE+ I  PLV+RL+
Sbjct: 323 GGATQKQVQEAIKLISSDPNVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+   +++ ESGL +I A DLD+AA+K V 
Sbjct: 383 GTNVESAKKIMEESGLRIIAADDLDEAAKKSVR 415


>gi|262375858|ref|ZP_06069090.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           lwoffii SH145]
 gi|262309461|gb|EEY90592.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           lwoffii SH145]
          Length = 388

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 276/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +G++ ++      A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGILATNADETVHAFEQLGGKFAVLKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S         +I+GS L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVVKSATEAAEYANQIIGSRLVTYQTDVNGQPVNSILVSEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L+L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLMPFQAREVAFALKL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +         +    Y+AF D D +L EINPL + +NG +  +D+KI  D NALYR  ++
Sbjct: 171 KDGQINQFVKVMTAAYQAFVDNDFALFEINPLSVRENGDILCVDAKIGIDSNALYRLPEV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADHSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+KIV AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISAHGLADAAEKIVAAVK 387


>gi|156778117|gb|ABU95433.1| Scs beta [Sawyeria marylandensis]
          Length = 415

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 267/397 (67%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            ++HEY +  LL+KY VPV  G V +S   A+    +L  P +VVK+QI AGGRGKG FK
Sbjct: 21  FSLHEYCSHQLLKKYKVPVPNGKVANSPEEAKEVAISLNEPKFVVKAQILAGGRGKGTFK 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV++  +++ V     +++G+ L+T Q+G  G  V+ V+V+      RELY+
Sbjct: 81  D---GYKGGVKLVDTVEEVQEVASKMIGNVLVTIQSGAEGKPVHKVFVQGCIQAKRELYV 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IASTQGGM IE+VA+D P+ I KL +D   GV  + +A L D L+  
Sbjct: 138 AILLDRETKGPVIIASTQGGMSIEDVARDTPELILKLPVDIKKGVDEKKLAVLVDGLKFT 197

Query: 181 GQA-RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +  +     +  NLY AFC  D  L+EINPLI   +G +   D+KI+ DDNA YR  +I
Sbjct: 198 TKELKNKCMTVIKNLYTAFCKTDSVLMEINPLIETPDGNVVCADAKINIDDNAFYRQKEI 257

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD ++EDSR++EA +H L+YI L GNI  +VNGAGLAMATMDIIK YG  PANFLD 
Sbjct: 258 FSLRDEAQEDSRDVEASKHGLNYIGLFGNIANLVNGAGLAMATMDIIKYYGAEPANFLDC 317

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGG+ +D+V AAFKI+  D  VK IL+NIFGGI +CDV+  GI+ AVKEV ++IPLV+RL
Sbjct: 318 GGGSSKDQVEAAFKILKKDKRVKAILVNIFGGITKCDVIASGIIDAVKEVGLDIPLVVRL 377

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N + G +L+ ESGL  ITA +LDDAAQK+V  +K
Sbjct: 378 EGTNAEEGIKLVNESGLKCITAKNLDDAAQKVVQCIK 414


>gi|330831784|ref|XP_003291936.1| succinate-CoA ligase (GDP-forming) [Dictyostelium purpureum]
 gi|325077850|gb|EGC31536.1| succinate-CoA ligase (GDP-forming) [Dictyostelium purpureum]
          Length = 424

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/396 (48%), Positives = 260/396 (65%), Gaps = 2/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEYQ+K L+ K+ V   K  V+   + A  A   L     VVK+Q+HAGGRGKG F 
Sbjct: 30  LDLHEYQSKQLMDKFGVNTQKWRVVKQANEATKAADELNAKELVVKAQVHAGGRGKGHFI 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV +  + K      +E+LG  L+TKQT   G++V  V + +  D  RELYL
Sbjct: 90  E--TGFKGGVHLCKTGKEAERLCKEMLGKHLVTKQTTAEGTKVQSVMLAESVDPARELYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR  G    IAS +GG+DIE VA++ P+ IFK  ID + G+ SE    L + L   
Sbjct: 148 AIVMDRKYGGPVMIASPKGGVDIESVAEETPELIFKEPIDIIGGIKSEQSKRLAEKLGFT 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          NLY+ F   D + +E+NP     +G++  +D+KI+FDDNA +R  +I 
Sbjct: 208 GEKVAIAQKQMENLYQLFIKCDATQVEVNPFAETTDGKIYAMDAKINFDDNASFRQKEIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED RE+EA +  L+YI LDG IGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 268 AMRDFAEEDQREVEASKFGLNYIGLDGTIGCMVNGAGLAMATMDIIKLKGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++ V  AFKI+T D  VK IL+NIFGGIM+CD++  GI++A K++ + IPLV+RLE
Sbjct: 328 GSASEEAVTEAFKIVTKDPRVKSILVNIFGGIMKCDIIASGIVNASKQIGLTIPLVVRLE 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV +G +++ +SGLN+ITA DLDDAA K V  +K
Sbjct: 388 GTNVQLGKQILEKSGLNIITANDLDDAAVKAVATLK 423


>gi|82543155|ref|YP_407102.1| succinyl-CoA synthetase subunit beta [Shigella boydii Sb227]
 gi|187732237|ref|YP_001879383.1| succinyl-CoA synthetase subunit beta [Shigella boydii CDC 3083-94]
 gi|123560272|sp|Q324I4|SUCC_SHIBS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734991|sp|B2TUB2|SUCC_SHIB3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81244566|gb|ABB65274.1| succinyl-CoA synthetase, beta subunit [Shigella boydii Sb227]
 gi|187429229|gb|ACD08503.1| succinate-CoA ligase, beta subunit [Shigella boydii CDC 3083-94]
 gi|320182932|gb|EFW57801.1| Succinyl-CoA ligase [ADP-forming] beta chain [Shigella flexneri CDC
           796-83]
 gi|332097636|gb|EGJ02611.1| succinyl-CoA synthetase beta chain [Shigella boydii 3594-74]
          Length = 388

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ PQ I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R LD++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQLDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|145631246|ref|ZP_01787019.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae R3021]
 gi|144983173|gb|EDJ90668.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae R3021]
 gi|301169937|emb|CBW29541.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           10810]
          Length = 389

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLAGGKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ +S +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVQSDVNILTAQSLQQAAELAVNAAKG 387


>gi|88811120|ref|ZP_01126376.1| succinyl-CoA synthase, beta subunit [Nitrococcus mobilis Nb-231]
 gi|88791659|gb|EAR22770.1| succinyl-CoA synthase, beta subunit [Nitrococcus mobilis Nb-231]
          Length = 389

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/386 (48%), Positives = 261/386 (67%), Gaps = 12/386 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  ++ +P+ +G V  SV  A  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKHLFSRFGIPIPRGYVARSVAEARKAAEQIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  +      +LG+ L+T Q+   G  VN V +E+G DI RELYL
Sbjct: 58  -------GGVKLAGSLDELTQYTESMLGTRLVTAQSPTKGLPVNAVLIEEGLDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  + F+AS  GGMDIEEVA  +P++I    ++P++G+ +     L   L L+
Sbjct: 111 SALVDRVSKRILFMASAAGGMDIEEVAAHHPERILTARVNPVVGLQAYQCRQLAFGLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY--RHLD 238
           G+   +   +  +LY  F ++D+SL+EINPLI+     L  LD+KI+ DDNA+   R  +
Sbjct: 171 GKRVGEWVKIMLSLYHCFIERDLSLIEINPLILTTQDELLALDAKINVDDNAVAVGRQPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I ++RD+S+ED  EI A QH L+YI L GNIGCMVNGAGLAMATMD+IKL GG PANFLD
Sbjct: 231 IADMRDLSQEDETEIRAAQHGLNYITLGGNIGCMVNGAGLAMATMDVIKLCGGEPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG   ++V  AFK+I S   VK IL+NIFGGI+RCD++ +GI++AVKEV +++P+++R
Sbjct: 291 VGGGTSTERVTEAFKLICSSPDVKAILVNIFGGIVRCDMIAEGIINAVKEVGVSVPVIVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDL 384
           LEG NV+ G  L+AES L++I A +L
Sbjct: 351 LEGTNVERGKELLAESELDIIAAGNL 376


>gi|311280398|ref|YP_003942629.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae SCF1]
 gi|308749593|gb|ADO49345.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae SCF1]
          Length = 388

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACSTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|66821399|ref|XP_644183.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
 gi|74860306|sp|Q869S7|SUCB2_DICDI RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|60472164|gb|EAL70117.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
          Length = 420

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 261/396 (65%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K+L+ KY V   K  V++    A  A   L G L VVK+Q+HAGGRGKG F 
Sbjct: 27  LNLHEYQSKSLMDKYGVNTQKWRVVTKASDAIKAASELNGEL-VVKAQVHAGGRGKGSFI 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV +  + K       E+LG  L+TKQT   G++V  V + +  D  RELY 
Sbjct: 86  E--TGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKRELYF 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR  G    IAS QGG+DIE VA++ P  IFK  ID + G+  E   +L + L   
Sbjct: 144 AIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEKLGFT 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          NLY+ F   D + +EINP     +G++  +D+KI+FDDNA +R  +I 
Sbjct: 204 GEKAKIAQQQMENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQKEIF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD +EED RE+EA +  L+YI LDGNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 264 EMRDTAEEDPREVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V  AFKI+T D  VK +L+NIFGGIM+CD++  GI++A K+V + IPLV+RLE
Sbjct: 324 GSASEQAVTEAFKILTKDPRVKCLLVNIFGGIMKCDIIASGIVNASKQVGLKIPLVVRLE 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+IG  ++ +SGLN+ +A DLDDAA K V+ +K
Sbjct: 384 GTNVNIGKEILEKSGLNITSASDLDDAAIKAVNCLK 419


>gi|189425773|ref|YP_001952950.1| succinyl-CoA synthetase subunit beta [Geobacter lovleyi SZ]
 gi|226734956|sp|B3E7B3|SUCC_GEOLS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189422032|gb|ACD96430.1| succinyl-CoA synthetase, beta subunit [Geobacter lovleyi SZ]
          Length = 387

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/392 (49%), Positives = 257/392 (65%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y +PV +  V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSTYGIPVPRNRVALTADQVERAAKMMGGHC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  L+TKQTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQASDVAKELFGKRLVTKQTGPEGLKVRRILVEETVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GGMDIEEVA+  P KI  L IDP  G+ +     +   L L 
Sbjct: 110 SITLDRETSRYCLIASAEGGMDIEEVAQKSPDKIHVLTIDPFTGLRTYQARKIALALGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  N YK   +KD SL+EINPL++ + G L  +D+KISFDDNA+YRH +  
Sbjct: 170 GAVCEDCVELILNTYKCCLEKDCSLIEINPLVVTRAGWLLAMDAKISFDDNAVYRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMVDYSQLDPLEITAGKYDLAYIKLTGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VK + +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKAVFVNIFGGIMRCDVIAQGIIEAANEVHCPLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+NV+ G +L+ ESGLNV    +L D AQKIV
Sbjct: 350 GSNVEDGKKLLLESGLNVQIGDNLGDGAQKIV 381


>gi|325578255|ref|ZP_08148390.1| succinyl-CoA ligase subunit beta [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159991|gb|EGC72120.1| succinyl-CoA ligase subunit beta [Haemophilus parainfluenzae ATCC
           33392]
          Length = 388

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L ++Y +PV++GVV  +   AE A+  L G +++ K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFKQYALPVSEGVVCKTADEAEMALFQLNGDVWIAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +   + LG  L+T QT   G  VN +Y+E+   I +ELYL
Sbjct: 58  -------GGVQLVHNAEEARAFADKWLGQHLVTFQTDKKGQPVNSIYIEETCQIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS+ GGM IE+VA++ P+ I K+ I+PL+G        L   L L 
Sbjct: 111 GAVIDRASQKVVFMASSAGGMSIEDVARETPELIHKVTIEPLVGGMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      ++F  L K F +KD SL+E+NPL++ K G L  +D+K+S DDN+LYRH D+ 
Sbjct: 171 GEQNKQFAEIFVKLAKLFIEKDFSLVEVNPLVVTKEGNLICVDAKVSIDDNSLYRHPDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+S+ D+RE EA+++ L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALRDLSQSDAREAEAEKYQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D +VK +L+NIFGGI+RCD++ +G+++A++EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDKNVKSVLVNIFGGIVRCDLIAEGVVAAIQEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  ++AESG+N+I A  L +
Sbjct: 351 GTNAPQGRAILAESGMNLIAAHSLQE 376


>gi|254560925|ref|YP_003068020.1| malate thiokinase, large subunit [Methylobacterium extorquens DM4]
 gi|254268203|emb|CAX24128.1| Malate thiokinase, large subunit [Methylobacterium extorquens DM4]
          Length = 390

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLDGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PL++RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESGL++ITA  L +AA+K V A  G
Sbjct: 351 GTNVDEGKKILAESGLDLITADTLTEAARKAVEACHG 387


>gi|188581004|ref|YP_001924449.1| malate--CoA ligase subunit beta [Methylobacterium populi BJ001]
 gi|179344502|gb|ACB79914.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
           BJ001]
          Length = 390

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLDGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PLV+RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +++AESGL++ITA  L +AA+K V A +G
Sbjct: 351 GTNVEEGKKILAESGLDLITADTLTEAARKAVEACRG 387


>gi|89902704|ref|YP_525175.1| succinyl-CoA synthetase subunit beta [Rhodoferax ferrireducens
           T118]
 gi|122478171|sp|Q21RF9|SUCC_RHOFD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89347441|gb|ABD71644.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodoferax
           ferrireducens T118]
          Length = 388

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 259/381 (67%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR+  VPV +G+   +V  A  A + L GP++VVK+QIHAGG       
Sbjct: 1   MKIHEYQGKEILRQAGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L+T QTGP G +V  + +EDGADI +E Y+
Sbjct: 54  ---RGKGGGVKLARSIDEVKKLAGEILGMQLVTHQTGPEGQKVRRLLIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR S  VA I S++GGM IE+VA D P+KI   ++DP  G+T      L + + + 
Sbjct: 111 SAVTDRASQRVAMIVSSEGGMSIEDVAHDTPEKIITEIVDPATGLTVAQATKLANAIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   +YK + D D SL+EINP+I+  NG ++ +D+K +FDDNAL+RH +I 
Sbjct: 171 AGSTAQAVDVLQKVYKVYMDTDASLVEINPMILEGNGNIKAIDAKFNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G +PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +VK IL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPNVKVILVNIFGGIMKCDTIAAGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N ++G +L+AESGL +I+A
Sbjct: 351 GTNEELGKKLLAESGLPIISA 371


>gi|145641204|ref|ZP_01796784.1| transcriptional regulator CysB [Haemophilus influenzae R3021]
 gi|145274041|gb|EDK13907.1| transcriptional regulator CysB [Haemophilus influenzae 22.4-21]
          Length = 389

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDDVDLVLAQLAGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|209776474|gb|ACI86549.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
          Length = 388

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDSREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|237808971|ref|YP_002893411.1| succinyl-CoA synthetase, beta subunit [Tolumonas auensis DSM 9187]
 gi|259511793|sp|C4L8V5|SUCC_TOLAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|237501232|gb|ACQ93825.1| succinyl-CoA synthetase, beta subunit [Tolumonas auensis DSM 9187]
          Length = 389

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/398 (50%), Positives = 260/398 (65%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G+  SS   A +A K L G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFADYGLPVPSGIPCSSADEAVAATKKLGGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V +   + LG  L+T QT   G  VN + VE   +I +ELYL
Sbjct: 58  -------GGVKVAGSEQEVRAFADQWLGKRLVTYQTDANGQPVNTILVETCGNIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GGMDIE VA + P+ I K  +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGMDIETVAHNTPELIHKAALDPLTGPQPYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F   D+SLLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 AEQLKQFTKIFLGLGKMFVACDLSLLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D ++ED RE+EA + +L+Y+ALDGNIGCMVNGAGLAM TMDIIK +GG PANFLDVG
Sbjct: 231 AWNDETQEDPREVEAARWDLNYVALDGNIGCMVNGAGLAMGTMDIIKHHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SDS VK +L+NIFGGI+RCD++  G++ AV EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKLILSDSKVKAVLVNIFGGIVRCDLIADGVIGAVAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N D+G++ +AESGLN+I A  L DAA+++V A + V
Sbjct: 351 GNNADLGSKKLAESGLNIIAATSLTDAAEQVVKAAEAV 388


>gi|329906524|ref|ZP_08274406.1| Succinyl-CoA ligase (ADP-forming) beta chain [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547280|gb|EGF32126.1| Succinyl-CoA ligase (ADP-forming) beta chain [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 388

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRKY V   +G+  ++V  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKYGVTTPRGIPCNTVEDAVKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V      ILG  L+T QT P G +V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKTLEQVREYATAILGMQLVTHQTSPEGQQVRRLLIEEGADIAKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  V  +AS++GGMDIEEVA+ +P+ +  + IDP +G+T  +   +   + + 
Sbjct: 111 SLVTDRVTQRVVLMASSEGGMDIEEVAESHPELLHHIAIDPAVGLTDAEADGIAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             + +D       LYKA+ + D +L EINPLI+  +G++  LD+K +FD NALYR  +I 
Sbjct: 171 AASIVDARTQLQGLYKAYWETDAALAEINPLILTGSGKVIALDAKFNFDANALYRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ E+EA + +L+YI+LDG+IGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDAAEVEASKFDLAYISLDGDIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  +K IL+NIFGGIM+CDV+ +G++ A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPGLKAILVNIFGGIMKCDVIAEGVIVASKAVSLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I A  ++DAA+++V A K 
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMEDAARQVVAAAKA 387


>gi|145639284|ref|ZP_01794890.1| transcriptional regulator CysB [Haemophilus influenzae PittII]
 gi|145271587|gb|EDK11498.1| transcriptional regulator CysB [Haemophilus influenzae PittII]
 gi|309751161|gb|ADO81145.1| Succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           R2866]
          Length = 389

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|218781620|ref|YP_002432938.1| succinyl-CoA synthetase subunit beta [Desulfatibacillum
           alkenivorans AK-01]
 gi|226734943|sp|B8FLW6|SUCC_DESAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218763004|gb|ACL05470.1| Succinate-CoA ligase (ADP-forming), beta subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 386

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/396 (51%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L   Y VPV KG  + SV  A  A K L     VVK+QIHA         
Sbjct: 1   MKIHEYQAKELFANYGVPVPKGKPVFSVDEAVEAAKELGDFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +   EILG  L+T QTGP G +V  + VE G DI +ELY 
Sbjct: 52  -GGRGKGGGVKLAQNIDEVKTIAGEILGMQLVTHQTGPEGQKVQKLLVEQGLDIAKELYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR +  +  + S  GGMDIEEVA   P+KI K+ +DPL+GV           L L 
Sbjct: 111 SIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGVQGYHCRQAAYRLNLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      +   LYK F D D SLLEINPL++  +  +  LD+KI+FDD+ALYRH DIQ
Sbjct: 171 PAAIKPFIKMVQGLYKMFMDTDCSLLEINPLVLTGDDGIIALDAKINFDDSALYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EE+  E+EA + NL+YI +DGN+G MVNGAGLAMATMDIIK  G  PANFLDVG
Sbjct: 231 EYRDLDEEEPLEVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIKQAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ ++V   F+II SD +VKGILINIFGGI+RCDVL  G++ A K+V +N+P+V+R+E
Sbjct: 291 GGANAEQVENGFRIILSDKNVKGILINIFGGILRCDVLASGVVEAAKKVGLNVPVVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G R++AESGLN+  A DL DAA K+   V+
Sbjct: 351 GTNVEEGRRILAESGLNLTGAEDLKDAAAKVAQIVQ 386


>gi|237750568|ref|ZP_04581048.1| succinyl-CoA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373658|gb|EEO24049.1| succinyl-CoA synthetase [Helicobacter bilis ATCC 43879]
          Length = 387

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 262/397 (65%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G V ++ + A++    L G ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLRKYGVATPRGRVANNGYEAKAIANELGGSVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +    +LG TL+T QTGP+G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVKLAKSLDEVATLTDSMLGMTLVTHQTGPSGKKVGRVYIEEGLDIKKEFYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR   M  FIAST+GGM+IEEVA+  P+KI K+ +DP IG  S     L   L L 
Sbjct: 111 AVVLDRGLEMPIFIASTEGGMEIEEVAERSPEKIIKVAVDPTIGFRSFHALELALGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +         LY+ F ++D   +EINP+I+  +G    LD+K+ FD+NALYRH DI 
Sbjct: 171 KEQQKPFSKFAKALYEVFINEDAEQVEINPMILTGDGSFLALDAKLGFDNNALYRHSDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EE+  EIEA + NLSY+ L+GN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 AMRDFTEEEPSEIEASESNLSYVKLEGNVGCMVNGAGLAMATMDIIKYEGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+   VA  F+II  D +VK I +NIFGGI++CD +  GI+ A K   + +P+V+RL+
Sbjct: 291 GGANPTTVAKGFEIILKDKNVKAIFVNIFGGIVQCDRVANGIIEATKLTSVEVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           G N +    ++  +G+ N+I A +L D AQK+V A K
Sbjct: 351 GTNAEKAKEILKGAGIKNLIAAENLKDGAQKVVAAAK 387


>gi|110834354|ref|YP_693213.1| succinyl-CoA synthetase subunit beta [Alcanivorax borkumensis SK2]
 gi|122959452|sp|Q0VPF7|SUCC_ALCBS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110647465|emb|CAL16941.1| succinyl-CoA synthetase, beta subunit [Alcanivorax borkumensis SK2]
          Length = 389

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+ G    +     +  K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFADYGLPVSTGFACDTPEEVAAKAKEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDTPEDAAAFAKKWLGKQLVTFQTDEHGQPVSKILVETCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V F+AST+GG+DIE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 SAVLDRASRRVVFMASTEGGVDIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F DKD++L+E+NPL+I   G L  LD+KI+ D +ALYRH DI+
Sbjct: 171 GKQVNQFAKIFVGLAKLFVDKDLALIEVNPLVITDTGDLHCLDAKINVDGSALYRHPDIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+ED RE  A + +L+Y+AL+GNIGCMVNGAGLAM TMD++KL GGAPANFLDVG
Sbjct: 231 ALDDPSQEDERERRAAEWDLNYVALEGNIGCMVNGAGLAMGTMDLVKLKGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VKG+L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDQVKGVLVNIFGGIVRCDLIAEGIIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++ +AESG+N+I A   DDAA+++V AV G
Sbjct: 351 GNNAELGSQKLAESGMNIIAAQSFDDAAEQVVKAVGG 387


>gi|78485718|ref|YP_391643.1| succinyl-CoA synthetase, beta subunit [Thiomicrospira crunogena
           XCL-2]
 gi|123555360|sp|Q31FV4|SUCC_THICR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78364004|gb|ABB41969.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thiomicrospira
           crunogena XCL-2]
          Length = 390

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/392 (48%), Positives = 260/392 (66%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L ++Y +PV KGV+I+ +   ++A+  +    +VVK+QIHAG RGK    
Sbjct: 1   MNLHEYQAKSLFQQYGIPVPKGVMINDLADLDAALGQIDSKGWVVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       E+LGS+L T QT      +N + +E   DI +E YL
Sbjct: 58  -------GGVKLVETAEEAEQAASELLGSSLATIQTAGKALPINALLIEQTLDIYQEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR +    F+ S  GGMDIE VA+  P+KI  + +DP +G+       +   L L 
Sbjct: 111 SLMVDRVTKTHTFVISAAGGMDIELVAEASPEKILSVHVDPTVGLMPYQCREIAFALGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      +    Y+   DKD+SLLEINPL++     L  LD+K++ D NALYR   + 
Sbjct: 171 GTAFKQMASVMQGFYQLALDKDVSLLEINPLVLTAENELVALDAKVNIDSNALYRQPGLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+ED RE +A  H L+YIALDGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 EMRDISQEDVREAKAADHQLNYIALDGNIGCMVNGAGLAMATMDLIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AFK+I S S V+ IL+NIFGGI+RCD++  GI+ AV+EV + IP+V+RLE
Sbjct: 291 GGATPERVAEAFKLILSSSDVQSILVNIFGGIVRCDLIADGIIQAVQEVGLTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV +G   +A SGL++ITA  L DAA+K+V
Sbjct: 351 GTNVTLGKEKLANSGLSIITADGLADAAEKVV 382


>gi|257092290|ref|YP_003165931.1| succinyl-CoA synthetase subunit beta [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044814|gb|ACV34002.1| succinyl-CoA synthetase, beta subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 386

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/395 (48%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+K+ V V +GV   SV  A  A +TL G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKKFGVVVPRGVFCPSVDDAVKAAETLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +V  + VE+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRQFAGQILGMQLVTHQTGPAGQKVRRLLVEEGADIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DRT+  V  +AS++GGMDIE+VA D P+KI K+ IDP+ G++    A L + + + 
Sbjct: 111 AALTDRTTQKVVMMASSEGGMDIEKVAHDTPEKILKVFIDPVDGISDAQAAELANGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY+ + + D SL EINPLI+  NG ++ +D+K +FD N+LYR  +I 
Sbjct: 171 AESVGQAVAALKGLYQCYMETDASLAEINPLILEGNGNIKAIDAKFNFDSNSLYRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AYRDLDEEDPDELEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AF+I+  +  VKGIL+NIFGGIMRCD +  G+++A +E  +++PLV+R++
Sbjct: 291 GGATTEKVTEAFQIMLRNPKVKGILVNIFGGIMRCDTIATGVVAAARETHLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N DIG +++++SGL +ITA  + +AA KIV AV
Sbjct: 351 GTNEDIGKKILSDSGLPIITADSMAEAATKIVAAV 385


>gi|268679715|ref|YP_003304146.1| succinyl-CoA synthetase subunit beta [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617746|gb|ACZ12111.1| succinyl-CoA synthetase, beta subunit [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 391

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/398 (47%), Positives = 253/398 (63%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K + R+Y V   +G V +SV  A      L G L+VVK+QIHAGGRG     
Sbjct: 1   MNIHEYQSKEIFRRYGVATPRGYVATSVEEAVENAHKLGGALWVVKAQIHAGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V    + +LG  L+T QTGP G+ V  VY+E+G DI  E YL
Sbjct: 58  -------GGVKLARSIEEVARYTQSLLGKNLVTHQTGPLGTVVQKVYIEEGMDIADEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AS +GGM+IE++A + P+KI K+ IDP IG        L   L L 
Sbjct: 111 GIVLDRAQEMPVIMASREGGMEIEKIAHETPEKIIKVTIDPFIGFQPYHGRELAFGLSLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D       LY+A+ D D S++EINPL+  K GR   LD K+SFDDNAL+RH +I 
Sbjct: 171 KEEMADFIAFAKALYQAYMDNDASMIEINPLVKTKQGRFIALDGKMSFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD SEE+  E EA ++ LSY+ L+GN+GCMVNGAGLAM TMDII   GG PANFLDVG
Sbjct: 231 AMRDYSEENPIEREASEYGLSYVKLNGNVGCMVNGAGLAMGTMDIIDYMGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+   VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K V +++P+++RL+
Sbjct: 291 GGANASTVAKGFEIILKDPNVKSIFVNIFGGIVRCDRIANGILEATKMVNVHVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      ++  + + N+I+A DL D AQK V A KG
Sbjct: 351 GTNAKEAVEILKNANIKNIISATDLSDGAQKAVAAAKG 388


>gi|167585555|ref|ZP_02377943.1| succinyl-CoA synthetase subunit beta [Burkholderia ubonensis Bu]
          Length = 388

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++A+SGL +I+A  +++AAQK+V A +G
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEEAAQKVVAAAEG 387


>gi|257464603|ref|ZP_05628974.1| succinyl-CoA synthetase subunit beta [Actinobacillus minor 202]
 gi|257450263|gb|EEV24306.1| succinyl-CoA synthetase subunit beta [Actinobacillus minor 202]
          Length = 389

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/388 (46%), Positives = 263/388 (67%), Gaps = 10/388 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y++PV++G+   S     +A+K L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYHLPVSQGIACQSADETVNALKRLNGEVWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +     LG+ L+T QT   G  VN +Y+E+   I  ELYL
Sbjct: 58  -------GGVKLVHNEQEARAFADYWLGNRLVTFQTDSRGQPVNTIYIEETCQIAHELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA+  P+ I K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRSSQKVIFMASSAGGMNIEEVAEKTPELIHKVALDPLVGGQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F +KD++LLE+NPL++ + G+L  LD+K+  D NALYRH ++ 
Sbjct: 171 NDEVKQFSHIFVQLSKLFIEKDLALLEVNPLVVTQQGQLICLDAKMVIDSNALYRHPELL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDPREAEAAKWQLNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV + +P+V+RLE
Sbjct: 291 GGTTKERVAEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVQVPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAA 388
           G N ++G  ++A+SGL+++ A  L +AA
Sbjct: 351 GTNAELGREILAKSGLSLLVANTLKEAA 378


>gi|152969298|ref|YP_001334407.1| succinyl-CoA synthetase subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206577005|ref|YP_002239648.1| succinate-CoA ligase, beta subunit [Klebsiella pneumoniae 342]
 gi|238893765|ref|YP_002918499.1| succinyl-CoA synthetase subunit beta [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936489|ref|YP_003440548.1| succinyl-CoA synthetase subunit beta [Klebsiella variicola At-22]
 gi|290510455|ref|ZP_06549825.1| succinyl-CoA ligase [ADP-forming] subunit beta [Klebsiella sp.
           1_1_55]
 gi|329998755|ref|ZP_08303209.1| succinate-CoA ligase, beta subunit [Klebsiella sp. MS 92-3]
 gi|189030249|sp|A6T6F6|SUCC_KLEP7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734960|sp|B5XZD1|SUCC_KLEP3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150954147|gb|ABR76177.1| succinyl-CoA synthetase subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206566063|gb|ACI07839.1| succinate-CoA ligase, beta subunit [Klebsiella pneumoniae 342]
 gi|238546081|dbj|BAH62432.1| succinyl-CoA synthetase beta subunit [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|288891198|gb|ADC59516.1| succinyl-CoA synthetase, beta subunit [Klebsiella variicola At-22]
 gi|289777171|gb|EFD85169.1| succinyl-CoA ligase [ADP-forming] subunit beta [Klebsiella sp.
           1_1_55]
 gi|328538582|gb|EGF64686.1| succinate-CoA ligase, beta subunit [Klebsiella sp. MS 92-3]
          Length = 388

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|296274210|ref|YP_003656841.1| succinyl-CoA synthetase subunit beta [Arcobacter nitrofigilis DSM
           7299]
 gi|296098384|gb|ADG94334.1| succinyl-CoA synthetase, beta subunit [Arcobacter nitrofigilis DSM
           7299]
          Length = 390

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/393 (46%), Positives = 266/393 (67%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L RKY++P  KG +++     +  ++++    +V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKNLYRKYDIPTTKGKLLTHPSQLDDILRSVGKNKWVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV + +S K    ++R +LGS L+T QT   G  VN +Y+E+  +I  E+YL
Sbjct: 58  -------GGVVLVNSKKEANEEVRRLLGSNLVTHQTNAQGQAVNSIYIEEPCEIKDEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + +VDRTS  +  I S++GGMDIEEVA+ +P+KI +  I+P++G+       +C+ L   
Sbjct: 111 AFIVDRTSQRIMIITSSEGGMDIEEVAERFPEKILRNPINPIVGIMPAQCRQICEDLGFD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +   DL  N+YK F  KD+SL+EINPL++ K+ +L  LD K+  D++ALYR   + 
Sbjct: 171 KDLSVQMIDLMKNIYKMFVQKDLSLVEINPLVVTKDNKLICLDGKVVVDNSALYRQPKMN 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE++A++ +L+Y++LDGNI CMVNGAGLAMATMD+IK +GG PANFLDVG
Sbjct: 231 EIRDDSQEDERELKAEKLDLNYVSLDGNIACMVNGAGLAMATMDLIKTHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  ++ +V  AF+II SD+ V GIL+NIFGGI+RCD++  GI+ A +++ INIP+V+RLE
Sbjct: 291 GSVNEKRVIEAFEIILSDTKVNGILVNIFGGIVRCDIIAAGIIGAAEKMNINIPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N   G  LI  S + V    DLD AA KI+ 
Sbjct: 351 GTNAKEGLELIKNSNVTVYEEADLDKAALKIIE 383


>gi|30248081|ref|NP_840151.1| ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain
           [Nitrosomonas europaea ATCC 19718]
 gi|30179966|emb|CAD83961.1| ATP-citrate lyase/succinyl-CoA ligases:ATP-grasp domain
           [Nitrosomonas europaea ATCC 19718]
          Length = 397

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/381 (51%), Positives = 260/381 (68%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKA+L +Y V V  GV   SV  A  A + L G  +VVK+QI+AGG       
Sbjct: 1   MKIHEYQAKAILSRYGVSVPAGVACFSVEEAVLAAEKLGGNKWVVKAQIYAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V      +L + L+T QTGP G  V+ +Y+E G DI  E YL
Sbjct: 54  ---RGKGGGVKLAKSIAEVRQFAEAMLFAPLVTHQTGPQGRIVHRLYIEQGVDIRHEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDRTS  V+ IAS  GGMDIE+VA   P+KI K+ IDPL G+   D   +   ++L 
Sbjct: 111 ALVVDRTSQCVSLIASDAGGMDIEQVAAGSPEKIHKIQIDPLAGLNLRDAERIVREIDLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     +   LY+AF + D SLLEINPLI+  + RL  LD+K++FDDNAL+RH +I 
Sbjct: 171 ESCQSAAITMLDALYRAFDENDASLLEINPLIVTPDNRLIALDAKMNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ E+D  E EA QH LSYI LDG+I C+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 ALRDLDEDDPLEAEASQHGLSYIPLDGDIACLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++ IL+NIFGGIMRCDV+ +G++SA +EVK+ +PL++RLE
Sbjct: 291 GGATVEKVTEAFKLMLRNPGLQAILVNIFGGIMRCDVIAEGVVSAAREVKLTVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G NV++G +++A+SGL +I+A
Sbjct: 351 GTNVELGKKILADSGLTIISA 371


>gi|253698899|ref|YP_003020088.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
 gi|251773749|gb|ACT16330.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
          Length = 386

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 259/397 (65%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSAFGIPVPRGRVALTADQVERAAKEMGGRC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G TL+T QTGP G +V  + VE+  DI RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDLAKELFGKTLVTPQTGPEGLKVRRILVEEAVDIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GGM+IEEVA   P+KI  L IDP +G+ S     +   L L 
Sbjct: 110 SITLDRGTSRYILIASAEGGMEIEEVATRSPEKIHTLTIDPFLGLRSFQARHIALQLGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D   L  NLY+   +KD +L+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVSLILNLYRVCLEKDCALVEINPLVVTRAGWLMAMDAKITFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L G IGC+VNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDPLEINAGKYDLAYIKLTGTIGCLVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKGI +NIFGGIMRCDV+  GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G+ V+ G RL+ ESGLNV    +L DAA +IV  + G
Sbjct: 350 GSQVEEGKRLLTESGLNVQCGDNLGDAAARIVKMLAG 386


>gi|319776562|ref|YP_004139050.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae F3047]
 gi|317451153|emb|CBY87386.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           F3047]
          Length = 389

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SL+E+NPL++   G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTPQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|328875764|gb|EGG24128.1| succinate-CoA ligase [Dictyostelium fasciculatum]
          Length = 435

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/393 (49%), Positives = 260/393 (66%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQA+ ++++Y +   KG V  +   AE   + L     V+K+QI AGGRGKG F 
Sbjct: 25  LNIHEYQAQKMMKQYGIDCPKGNVADTPEEAEKISEVLNAQDLVIKAQILAGGRGKGIFT 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV + S    V +  +++LG TLITKQTGP G  VN VY+ +   + RE+Y 
Sbjct: 85  ---SGLKGGVHICSDAAQVKNYAKKMLGYTLITKQTGPEGKVVNQVYIAERHYLRREMYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    I S +GGMDIE VAK+ P  I+   ID + GV  E  A L   L + 
Sbjct: 142 AILMDRKTGGPVMIGSPEGGMDIETVAKENPNAIYVEAIDIMQGVKPEQTARLAAKLGIS 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINPL     G +  +D+K++FDDNA +R  +I 
Sbjct: 202 PKNIPKAQDQMQKLYDFFIKNDCTLVEINPLAETATGEVMCMDAKLNFDDNAAFRQKEIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE++A +++L+YI LDG IGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 262 ELRDRSQEDPREVKASEYDLNYIGLDGTIGCLVNGAGLAMATMDIIKHYGGNPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD  VK IL+NIFGGIM+CD++  GI++AVKE+ I  PLV+RL+
Sbjct: 322 GGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+   +++ ESGL +I A DLD+AA+K V 
Sbjct: 382 GTNVEYAKKIMEESGLRLIAADDLDEAAEKSVR 414


>gi|260866858|ref|YP_003233260.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O111:H-
           str. 11128]
 gi|257763214|dbj|BAI34709.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O111:H-
           str. 11128]
 gi|323180034|gb|EFZ65590.1| succinyl-CoA synthetase beta chain [Escherichia coli 1180]
          Length = 388

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G+       L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGLMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|329295938|ref|ZP_08253274.1| succinyl-CoA synthetase subunit beta [Plautia stali symbiont]
          Length = 388

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE QAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHECQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRTFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVIFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLATMFLERDLAMVEINPLVITKQGNLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA + +V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKKRVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNMPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|283833987|ref|ZP_06353728.1| succinyl-CoA ligase [ADP-forming] subunit beta [Citrobacter youngae
           ATCC 29220]
 gi|291070121|gb|EFE08230.1| succinyl-CoA ligase [ADP-forming] subunit beta [Citrobacter youngae
           ATCC 29220]
          Length = 388

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACNTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|312970805|ref|ZP_07784984.1| succinyl-CoA synthetase beta chain [Escherichia coli 1827-70]
 gi|310336566|gb|EFQ01733.1| succinyl-CoA synthetase beta chain [Escherichia coli 1827-70]
          Length = 388

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y++P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYDLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|193070631|ref|ZP_03051568.1| succinate-CoA ligase, beta subunit [Escherichia coli E110019]
 gi|192956019|gb|EDV86485.1| succinate-CoA ligase, beta subunit [Escherichia coli E110019]
          Length = 388

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F +L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMDLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|90416062|ref|ZP_01223995.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2207]
 gi|90332436|gb|EAS47633.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2207]
          Length = 388

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +V  A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIAAETVAEAVAAADEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVSSKAEIEAFSEQWLGKNLVTYQTDAKGQPVSRILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+KI K +IDPL G        L   L L+
Sbjct: 111 GAVVDRGSRRIIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQGRDLAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD+ LLE+NPL+I   G L  LD+K+  D NA+YR   I+
Sbjct: 171 GVQIKQFVQIFMGLAKLFKEKDLELLEVNPLVITDEGNLHCLDAKVIIDGNAMYRQPAIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED+RE  A    L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 AMHDPSQEDAREAHAASFELNYVALDGNIGCMVNGAGLAMGTMDIVHLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +LINIFGGI+RCD++  G++ AV+EV + IP+V+RLE
Sbjct: 291 GGATKERVVEAFKIILSDSNVKAVLINIFGGIVRCDLIADGVIGAVEEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +AESGL +I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGTKKLAESGLAIIAATSLTDAAQQAVKAAGG 387


>gi|304311200|ref|YP_003810798.1| Succinyl-CoA synthetase, beta subunit [gamma proteobacterium HdN1]
 gi|301796933|emb|CBL45146.1| Succinyl-CoA synthetase, beta subunit [gamma proteobacterium HdN1]
          Length = 388

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/398 (50%), Positives = 276/398 (69%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+KGV   SV AA +A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFAQYGLPVSKGVAAQSVDAAVAAAKEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +  + + +  R++LG+ L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKLVTDKEEIRAFARKLLGTNLVTYQTDERGQPVNTILVETCTDIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG++IE+VA D P+KI K+ IDPL+G        L   L L 
Sbjct: 111 GAVLDRGSRRVVFMASTEGGVEIEKVAHDTPEKILKVAIDPLVGAQPYQGRVLGYQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++F  L K F +KD S++E+NPL+I K G L  LD+K+  D +AL+RH D++
Sbjct: 171 SNQVKQFVNIFMGLAKIFEEKDCSIIEVNPLVITKEGNLHCLDAKVVLDGSALFRHPDME 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D ++ED RE  A Q +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 231 ALYDPTQEDERERIAAQWSLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V+ +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVQAVLVNIFGGIVRCDLIADGIIGAVQEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N D+G + +A+SGLN+I A   +DAA+K+V A  GV
Sbjct: 351 GNNADLGAKKLADSGLNIIAASGFNDAAEKVVKAAAGV 388


>gi|15602145|ref|NP_245217.1| succinyl-CoA synthetase subunit beta [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|21264046|sp|Q9CNZ0|SUCC_PASMU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|12720512|gb|AAK02364.1| SucC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 388

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV KG    S   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAEYQLPVGKGYACKSADEAADAIKKLNGDVWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   + LG  L+T QT   G  VN +YVE+G+ I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFADQWLGQRLVTFQTDVNGQPVNTLYVEEGSSIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+ ST+GG++IEEVA+  P  + K+ IDPL G        L   L L+
Sbjct: 111 GAVLDRASQRVVFMVSTEGGVNIEEVAEKTPHLLHKMAIDPLTGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  + K F +KD++LLE+NPL++ K G L  LD+KI  D NALYR   ++
Sbjct: 171 GDQIKQFAHIFVQMAKMFVEKDLALLEVNPLVVTKEGNLLCLDAKIVVDSNALYRQPALK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A+ H L+Y+AL+GNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 AMQDPSQEDPREALAESHQLNYVALEGNIGCMVNGAGLAMGTMDIIKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSAVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SG+N+I A  L DAA + V A +G
Sbjct: 351 GNNAPLGREILANSGVNIIAANTLTDAAIQAVKAAEG 387


>gi|145637050|ref|ZP_01792713.1| transcriptional regulator CysB [Haemophilus influenzae PittHH]
 gi|145269704|gb|EDK09644.1| transcriptional regulator CysB [Haemophilus influenzae PittHH]
          Length = 389

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGGKWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMNIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+F  L + F +KD+SL+E+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 DAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|163851226|ref|YP_001639269.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
           PA1]
 gi|218530094|ref|YP_002420910.1| malate--CoA ligase subunit beta [Methylobacterium chloromethanicum
           CM4]
 gi|240138379|ref|YP_002962851.1| Malate thiokinase, large subunit [Methylobacterium extorquens AM1]
 gi|259016276|sp|P53594|MTKA_METEA RecName: Full=Malate--CoA ligase subunit beta; AltName:
           Full=MTK-beta; AltName: Full=Malate thiokinase; AltName:
           Full=Malyl-CoA synthetase
 gi|163662831|gb|ABY30198.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           PA1]
 gi|218522397|gb|ACK82982.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           chloromethanicum CM4]
 gi|240008348|gb|ACS39574.1| Malate thiokinase, large subunit [Methylobacterium extorquens AM1]
          Length = 390

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PL++RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESGL++ITA  L +AA+K V A  G
Sbjct: 351 GTNVDEGKKILAESGLDLITADTLTEAARKAVEACHG 387


>gi|197116660|ref|YP_002137087.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
 gi|197086020|gb|ACH37291.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
          Length = 386

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 258/397 (64%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSTFGIPVPRGRVALTADQVERAAKEMGGRC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G TL+T QTGP G +V  + VE+  DI RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDLAKELFGKTLVTPQTGPEGLKVRRILVEEAVDIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GGM+IEEVA   P+KI  L IDP  G+ S     +   L L 
Sbjct: 110 SITLDRGTSRYILIASAEGGMEIEEVATRSPEKIHTLTIDPFTGLRSFQARHIALQLGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D   L  NLY+   +KD +L+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVSLILNLYRVCLEKDCALVEINPLVVTRAGWLMAMDAKITFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L G IGC+VNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDPLEINAGKYDLAYIKLTGTIGCLVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKGI +NIFGGIMRCDV+  GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G+ V+ G RL+ ESGLNV    +L DAA +IV  + G
Sbjct: 350 GSQVEEGKRLLTESGLNVQCGDNLGDAAARIVKMLAG 386


>gi|215485746|ref|YP_002328177.1| succinyl-CoA synthetase subunit beta [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965158|ref|ZP_07779395.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
 gi|215263818|emb|CAS08155.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312290249|gb|EFR18132.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
 gi|323191072|gb|EFZ76337.1| succinyl-CoA synthetase beta chain [Escherichia coli RN587/1]
          Length = 388

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLVCLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|193213142|ref|YP_001999095.1| succinyl-CoA synthetase subunit beta [Chlorobaculum parvum NCIB
           8327]
 gi|226734934|sp|B3QPP2|SUCC_CHLP8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|193086619|gb|ACF11895.1| succinyl-CoA synthetase, beta subunit [Chlorobaculum parvum NCIB
           8327]
          Length = 392

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/399 (46%), Positives = 261/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+++ V V KG+V  S   A+ A   L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKGILKQFGVAVPKGIVAFSAEEAKQAAAELFEEQSSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S + V    +++LG+TL+T QTGP G  V  + +E+G +I +
Sbjct: 61  A----------GGVKLAKSPEEVYEIAQKMLGTTLVTHQTGPEGKEVRRLLIEEGMNIDK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR +     + ST+GGM+IE+VA++ P+K+ K+ ++P  G+           
Sbjct: 111 EFYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPKYGLQGFQAREAALF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L +QG+   +G      LYKA+   D SL EINPL++ K GR+  LD+KI+FDDNA+YRH
Sbjct: 171 LGMQGEQFRNGVKFIDALYKAYTTIDASLAEINPLVVTKEGRVLALDAKINFDDNAMYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD++EED  E EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 PDFHELRDITEEDPLEYEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII  D +VK IL+N+FGGI+RCD +  G++ A K + + +P++
Sbjct: 291 LDVGGGASPKTVEEGFKIILGDKNVKAILVNVFGGIVRCDRVAGGVIEAAKNIGLTVPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N     +++ ESGL++I A  L DAA+K+  A+
Sbjct: 351 VRLEGTNAKEAQKMLDESGLSLIAANGLRDAAEKVQKAL 389


>gi|300918387|ref|ZP_07134987.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           115-1]
 gi|300937816|ref|ZP_07152612.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           21-1]
 gi|300414450|gb|EFJ97760.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           115-1]
 gi|300457181|gb|EFK20674.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           21-1]
          Length = 388

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|332342063|gb|AEE55397.1| oxoglutarate dehydrogenase, succinyl-CoA synthetase beta chain SucC
           [Escherichia coli UMNK88]
          Length = 388

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGVPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|220926857|ref|YP_002502159.1| malate--CoA ligase subunit beta [Methylobacterium nodulans ORS
           2060]
 gi|219951464|gb|ACL61856.1| succinyl-CoA synthetase, beta subunit [Methylobacterium nodulans
           ORS 2060]
          Length = 392

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + VP+ KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVPIPKGAVAFSPDQAVYAATELGGWHWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  +   V    +++LG  L+T QTGP G  V  VY+E      RELYL
Sbjct: 58  -------GGIRLCKTYNEVRDAAKDLLGKRLVTHQTGPEGKPVQRVYIETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+   +   L   L L 
Sbjct: 111 GFVLDRKAERVRVIASQRGGMDIEEIAATDPEALLQVVVEPAVGLQQFEARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          + Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVGGAVKTIMSAYRAFRDCDATMLEINPLVVTKDDRILALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNL+YI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMYDPSQSDPREAQASEHNLNYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EV+I +PLV+RL 
Sbjct: 291 GGASPQRVATAFRLVLSDPNVKAILVNIFAGINRCDWIAQGVIQAAQEVQITVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  ++ +SGLN+ITA  L +AA+K V AVKG
Sbjct: 351 GTNVEAGKAILEKSGLNLITADTLTEAAEKAVQAVKG 387


>gi|218553254|ref|YP_002386167.1| succinyl-CoA synthetase subunit beta [Escherichia coli IAI1]
 gi|226734947|sp|B7M5P1|SUCC_ECO8A RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218360022|emb|CAQ97569.1| succinyl-CoA synthetase, beta subunit [Escherichia coli IAI1]
          Length = 388

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAEVGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|332977243|gb|EGK14038.1| succinyl-CoA ligase subunit beta [Psychrobacter sp. 1501(2011)]
          Length = 389

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 267/397 (67%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +P+ KG++  +   A  A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKLLLESYGLPIQKGIIAYNGEEAAEAFDKTPTDVAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLAKTREEAKEIAESLIGTNLVTYQTDAEGQPVNFVLVAEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+KIF + +DPL+G+       +   L L
Sbjct: 111 LGAVVDRATRRVTFMASTEGGVEIEKVAEETPEKIFSITVDPLVGLLPFQAREVGFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    YKAF + D  ++EINPL + +NG L  +D KI  D NAL+R   I
Sbjct: 171 EGKQINQFVKLMTGAYKAFIENDFDMIEINPLAVRENGELACVDGKIGVDSNALFRQPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            EL D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AELHDPSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII  D SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVVEAFKIILEDESVKGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ES + VI+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAKLLDESDVKVISAQGLSDAAQKIVDAVK 387


>gi|15800432|ref|NP_286444.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7
           EDL933]
 gi|15830007|ref|NP_308780.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           Sakai]
 gi|16128703|ref|NP_415256.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|24111996|ref|NP_706506.1| succinyl-CoA synthetase subunit beta [Shigella flexneri 2a str.
           301]
 gi|26246695|ref|NP_752735.1| succinyl-CoA synthetase subunit beta [Escherichia coli CFT073]
 gi|30062109|ref|NP_836280.1| succinyl-CoA synthetase subunit beta [Shigella flexneri 2a str.
           2457T]
 gi|74311252|ref|YP_309671.1| succinyl-CoA synthetase subunit beta [Shigella sonnei Ss046]
 gi|89107585|ref|AP_001365.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|91209761|ref|YP_539747.1| succinyl-CoA synthetase subunit beta [Escherichia coli UTI89]
 gi|110640936|ref|YP_668664.1| succinyl-CoA synthetase subunit beta [Escherichia coli 536]
 gi|117622921|ref|YP_851834.1| succinyl-CoA synthetase subunit beta [Escherichia coli APEC O1]
 gi|157156644|ref|YP_001461887.1| succinyl-CoA synthetase subunit beta [Escherichia coli E24377A]
 gi|157160207|ref|YP_001457525.1| succinyl-CoA synthetase subunit beta [Escherichia coli HS]
 gi|168750659|ref|ZP_02775681.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168757181|ref|ZP_02782188.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764009|ref|ZP_02789016.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168767168|ref|ZP_02792175.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777544|ref|ZP_02802551.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779211|ref|ZP_02804218.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786881|ref|ZP_02811888.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|168801363|ref|ZP_02826370.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|170020928|ref|YP_001725882.1| succinyl-CoA synthetase subunit beta [Escherichia coli ATCC 8739]
 gi|170080394|ref|YP_001729714.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683514|ref|YP_001742828.1| succinyl-CoA synthetase subunit beta [Escherichia coli SMS-3-5]
 gi|188493233|ref|ZP_03000503.1| succinyl-CoA synthetase, beta chain [Escherichia coli 53638]
 gi|191167222|ref|ZP_03029041.1| succinate-CoA ligase, beta subunit [Escherichia coli B7A]
 gi|191174058|ref|ZP_03035574.1| succinate-CoA ligase, beta subunit [Escherichia coli F11]
 gi|193065521|ref|ZP_03046589.1| succinate-CoA ligase, beta subunit [Escherichia coli E22]
 gi|194429053|ref|ZP_03061584.1| succinate-CoA ligase, beta subunit [Escherichia coli B171]
 gi|194433995|ref|ZP_03066266.1| succinate-CoA ligase, beta subunit [Shigella dysenteriae 1012]
 gi|194439223|ref|ZP_03071303.1| succinate-CoA ligase, beta subunit [Escherichia coli 101-1]
 gi|195939069|ref|ZP_03084451.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           EC4024]
 gi|208815204|ref|ZP_03256383.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822988|ref|ZP_03263306.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209397431|ref|YP_002269351.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917978|ref|YP_002292062.1| succinyl-CoA synthetase subunit beta [Escherichia coli SE11]
 gi|217324788|ref|ZP_03440872.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218549708|ref|YP_002383499.1| succinyl-CoA synthetase subunit beta [Escherichia fergusonii ATCC
           35469]
 gi|218557643|ref|YP_002390556.1| succinyl-CoA synthetase subunit beta [Escherichia coli S88]
 gi|218688521|ref|YP_002396733.1| succinyl-CoA synthetase subunit beta [Escherichia coli ED1a]
 gi|218694151|ref|YP_002401818.1| succinyl-CoA synthetase subunit beta [Escherichia coli 55989]
 gi|218699082|ref|YP_002406711.1| succinyl-CoA synthetase subunit beta [Escherichia coli IAI39]
 gi|218704044|ref|YP_002411563.1| succinyl-CoA synthetase subunit beta [Escherichia coli UMN026]
 gi|227884306|ref|ZP_04002111.1| succinyl-CoA synthetase subunit beta [Escherichia coli 83972]
 gi|237707310|ref|ZP_04537791.1| succinyl-CoA synthetase subunit beta [Escherichia sp. 3_2_53FAA]
 gi|238899992|ref|YP_002925788.1| succinyl-CoA synthetase, beta subunit [Escherichia coli BW2952]
 gi|253774302|ref|YP_003037133.1| succinyl-CoA synthetase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160797|ref|YP_003043905.1| succinyl-CoA synthetase subunit beta [Escherichia coli B str.
           REL606]
 gi|254791874|ref|YP_003076711.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021199|ref|ZP_05435064.1| succinyl-CoA synthetase subunit beta [Shigella sp. D9]
 gi|256023671|ref|ZP_05437536.1| succinyl-CoA synthetase subunit beta [Escherichia sp. 4_1_40B]
 gi|260842934|ref|YP_003220712.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O103:H2
           str. 12009]
 gi|260853962|ref|YP_003227853.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O26:H11
           str. 11368]
 gi|261224428|ref|ZP_05938709.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261254581|ref|ZP_05947114.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281660|ref|YP_003498478.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           O55:H7 str. CB9615]
 gi|293403971|ref|ZP_06647965.1| sucC [Escherichia coli FVEC1412]
 gi|293409101|ref|ZP_06652677.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293414005|ref|ZP_06656654.1| succinyl-CoA ligase subunit beta [Escherichia coli B185]
 gi|293432996|ref|ZP_06661424.1| succinyl-CoA ligase subunit beta [Escherichia coli B088]
 gi|297521615|ref|ZP_06940001.1| succinyl-CoA synthetase subunit beta [Escherichia coli OP50]
 gi|298379747|ref|ZP_06989352.1| succinyl-CoA ligase subunit beta [Escherichia coli FVEC1302]
 gi|300816375|ref|ZP_07096597.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           107-1]
 gi|300822985|ref|ZP_07103120.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           119-7]
 gi|300900722|ref|ZP_07118871.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           198-1]
 gi|300906985|ref|ZP_07124654.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           84-1]
 gi|300926130|ref|ZP_07141943.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           182-1]
 gi|300929468|ref|ZP_07144936.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           187-1]
 gi|300947193|ref|ZP_07161403.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           116-1]
 gi|300957675|ref|ZP_07169864.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           175-1]
 gi|300972376|ref|ZP_07171913.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           200-1]
 gi|300993153|ref|ZP_07180236.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|301020812|ref|ZP_07184876.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           69-1]
 gi|301027092|ref|ZP_07190464.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           196-1]
 gi|301051353|ref|ZP_07198176.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|301305214|ref|ZP_07211312.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           124-1]
 gi|301327919|ref|ZP_07221090.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           78-1]
 gi|301648031|ref|ZP_07247798.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           146-1]
 gi|306812864|ref|ZP_07447057.1| succinyl-CoA synthetase subunit beta [Escherichia coli NC101]
 gi|307137339|ref|ZP_07496695.1| succinyl-CoA synthetase subunit beta [Escherichia coli H736]
 gi|307314808|ref|ZP_07594402.1| succinyl-CoA synthetase, beta subunit [Escherichia coli W]
 gi|309797440|ref|ZP_07691832.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           145-7]
 gi|331641228|ref|ZP_08342363.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H736]
 gi|331645876|ref|ZP_08346979.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M605]
 gi|331651725|ref|ZP_08352744.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M718]
 gi|331656745|ref|ZP_08357707.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA206]
 gi|331662080|ref|ZP_08363003.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA143]
 gi|331672242|ref|ZP_08373033.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA280]
 gi|331676409|ref|ZP_08377106.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H591]
 gi|331682158|ref|ZP_08382780.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H299]
 gi|332282425|ref|ZP_08394838.1| succinyl-CoA synthetase subunit beta [Shigella sp. D9]
 gi|67473117|sp|P0A836|SUCC_ECOLI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67473118|sp|P0A837|SUCC_ECOL6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67473119|sp|P0A838|SUCC_ECO57 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67473120|sp|P0A839|SUCC_SHIFL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123617726|sp|Q3Z476|SUCC_SHISS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189029907|sp|A7ZJA8|SUCC_ECO24 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030209|sp|A7ZXY8|SUCC_ECOHS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030212|sp|B1IY02|SUCC_ECOLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734945|sp|B5YQR7|SUCC_ECO5E RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734946|sp|B7NMS9|SUCC_ECO7I RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734948|sp|B1X6Q8|SUCC_ECODH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734949|sp|B7N9W6|SUCC_ECOLU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734950|sp|B6I7Z9|SUCC_ECOSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734951|sp|B1LLG1|SUCC_ECOSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778439|sp|B7LAD4|SUCC_ECO55 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|259511780|sp|C4ZWK2|SUCC_ECOBW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1065086|pdb|1SCU|B Chain B, The Crystal Structure Of Succinyl-Coa Synthetase From
           Escherichia Coli At 2.5 Angstroms Resolution
 gi|1065088|pdb|1SCU|E Chain E, The Crystal Structure Of Succinyl-Coa Synthetase From
           Escherichia Coli At 2.5 Angstroms Resolution
 gi|5822496|pdb|2SCU|B Chain B, A Detailed Description Of The Structure Of Succinyl-Coa
           Synthetase From Escherichia Coli
 gi|5822498|pdb|2SCU|E Chain E, A Detailed Description Of The Structure Of Succinyl-Coa
           Synthetase From Escherichia Coli
 gi|18655524|pdb|1JKJ|B Chain B, E. Coli Scs
 gi|18655526|pdb|1JKJ|E Chain E, E. Coli Scs
 gi|157835423|pdb|2NU6|B Chain B, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835425|pdb|2NU6|E Chain E, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835427|pdb|2NU7|B Chain B, C123as Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835429|pdb|2NU7|E Chain E, C123as Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835431|pdb|2NU8|B Chain B, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835433|pdb|2NU8|E Chain E, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835435|pdb|2NU9|B Chain B, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835437|pdb|2NU9|E Chain E, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835439|pdb|2NU9|G Chain G, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835441|pdb|2NU9|I Chain I, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835443|pdb|2NUA|B Chain B, C123av Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835445|pdb|2NUA|E Chain E, C123av Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|12513646|gb|AAG55052.1|AE005251_1 succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. EDL933]
 gi|26107094|gb|AAN79278.1|AE016757_182 Succinyl-CoA synthetase beta chain [Escherichia coli CFT073]
 gi|146203|gb|AAA23899.1| succinyl-CoA synthetase beta-subunit [Escherichia coli K-12]
 gi|1651323|dbj|BAA35394.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K12
           substr. W3110]
 gi|1786948|gb|AAC73822.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|13360212|dbj|BAB34176.1| succinyl-CoA synthetase beta subunit [Escherichia coli O157:H7 str.
           Sakai]
 gi|24050810|gb|AAN42213.1| succinyl-CoA synthetase, beta subunit [Shigella flexneri 2a str.
           301]
 gi|30040354|gb|AAP16086.1| succinyl-CoA synthetase, beta subunit [Shigella flexneri 2a str.
           2457T]
 gi|73854729|gb|AAZ87436.1| succinyl-CoA synthetase, beta subunit [Shigella sonnei Ss046]
 gi|91071335|gb|ABE06216.1| succinyl-CoA synthetase, beta subunit [Escherichia coli UTI89]
 gi|110342528|gb|ABG68765.1| succinyl-CoA synthetase beta chain [Escherichia coli 536]
 gi|115512045|gb|ABJ00120.1| succinyl-CoA synthetase, beta subunit [Escherichia coli APEC O1]
 gi|157065887|gb|ABV05142.1| succinate-CoA ligase, beta subunit [Escherichia coli HS]
 gi|157078674|gb|ABV18382.1| succinate-CoA ligase, beta subunit [Escherichia coli E24377A]
 gi|169755856|gb|ACA78555.1| succinyl-CoA synthetase, beta subunit [Escherichia coli ATCC 8739]
 gi|169888229|gb|ACB01936.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. DH10B]
 gi|170521232|gb|ACB19410.1| succinate-CoA ligase, beta subunit [Escherichia coli SMS-3-5]
 gi|187767243|gb|EDU31087.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015215|gb|EDU53337.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488432|gb|EDU63535.1| succinyl-CoA synthetase, beta chain [Escherichia coli 53638]
 gi|189002749|gb|EDU71735.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189355781|gb|EDU74200.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363437|gb|EDU81856.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365910|gb|EDU84326.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373189|gb|EDU91605.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|189376458|gb|EDU94874.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|190902770|gb|EDV62500.1| succinate-CoA ligase, beta subunit [Escherichia coli B7A]
 gi|190905666|gb|EDV65289.1| succinate-CoA ligase, beta subunit [Escherichia coli F11]
 gi|192926810|gb|EDV81436.1| succinate-CoA ligase, beta subunit [Escherichia coli E22]
 gi|194412884|gb|EDX29175.1| succinate-CoA ligase, beta subunit [Escherichia coli B171]
 gi|194417760|gb|EDX33858.1| succinate-CoA ligase, beta subunit [Shigella dysenteriae 1012]
 gi|194421808|gb|EDX37815.1| succinate-CoA ligase, beta subunit [Escherichia coli 101-1]
 gi|208731852|gb|EDZ80540.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737181|gb|EDZ84865.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158831|gb|ACI36264.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209776468|gb|ACI86546.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209776470|gb|ACI86547.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209776472|gb|ACI86548.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209776476|gb|ACI86550.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209911237|dbj|BAG76311.1| succinyl-CoA synthase beta subunit [Escherichia coli SE11]
 gi|217321009|gb|EEC29433.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350883|emb|CAU96581.1| succinyl-CoA synthetase, beta subunit [Escherichia coli 55989]
 gi|218357249|emb|CAQ89884.1| succinyl-CoA synthetase, beta subunit [Escherichia fergusonii ATCC
           35469]
 gi|218364412|emb|CAR02092.1| succinyl-CoA synthetase, beta subunit [Escherichia coli S88]
 gi|218369068|emb|CAR16822.1| succinyl-CoA synthetase, beta subunit [Escherichia coli IAI39]
 gi|218426085|emb|CAR06903.1| succinyl-CoA synthetase, beta subunit [Escherichia coli ED1a]
 gi|218431141|emb|CAR12017.1| succinyl-CoA synthetase, beta subunit [Escherichia coli UMN026]
 gi|222032464|emb|CAP75203.1| Succinyl-CoA synthetase beta chain [Escherichia coli LF82]
 gi|226898520|gb|EEH84779.1| succinyl-CoA synthetase subunit beta [Escherichia sp. 3_2_53FAA]
 gi|227838727|gb|EEJ49193.1| succinyl-CoA synthetase subunit beta [Escherichia coli 83972]
 gi|238863592|gb|ACR65590.1| succinyl-CoA synthetase, beta subunit [Escherichia coli BW2952]
 gi|242376489|emb|CAQ31193.1| succinyl-CoA synthetase, beta subunit, subunit of succinyl-CoA
           synthetase [Escherichia coli BL21(DE3)]
 gi|253325346|gb|ACT29948.1| succinyl-CoA synthetase, beta subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972698|gb|ACT38369.1| succinyl-CoA synthetase subunit beta [Escherichia coli B str.
           REL606]
 gi|253976892|gb|ACT42562.1| succinyl-CoA synthetase subunit beta [Escherichia coli BL21(DE3)]
 gi|254591274|gb|ACT70635.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. TW14359]
 gi|257752611|dbj|BAI24113.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O26:H11
           str. 11368]
 gi|257758081|dbj|BAI29578.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O103:H2
           str. 12009]
 gi|260450119|gb|ACX40541.1| succinyl-CoA synthetase, beta subunit [Escherichia coli DH1]
 gi|281177870|dbj|BAI54200.1| succinyl-CoA synthetase beta subunit [Escherichia coli SE15]
 gi|281599957|gb|ADA72941.1| Succinyl-CoA synthetase beta chain [Shigella flexneri 2002017]
 gi|284920506|emb|CBG33568.1| succinyl-CoA synthetase beta chain [Escherichia coli 042]
 gi|290761533|gb|ADD55494.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323815|gb|EFE63237.1| succinyl-CoA ligase subunit beta [Escherichia coli B088]
 gi|291428557|gb|EFF01582.1| sucC [Escherichia coli FVEC1412]
 gi|291434063|gb|EFF07036.1| succinyl-CoA ligase subunit beta [Escherichia coli B185]
 gi|291469569|gb|EFF12053.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294489791|gb|ADE88547.1| succinate-CoA ligase, beta subunit [Escherichia coli IHE3034]
 gi|298279445|gb|EFI20953.1| succinyl-CoA ligase subunit beta [Escherichia coli FVEC1302]
 gi|299879426|gb|EFI87637.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           196-1]
 gi|300297015|gb|EFJ53400.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|300309175|gb|EFJ63695.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           200-1]
 gi|300315593|gb|EFJ65377.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           175-1]
 gi|300355781|gb|EFJ71651.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           198-1]
 gi|300398458|gb|EFJ81996.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           69-1]
 gi|300401206|gb|EFJ84744.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           84-1]
 gi|300406683|gb|EFJ90221.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|300417829|gb|EFK01140.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           182-1]
 gi|300453179|gb|EFK16799.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           116-1]
 gi|300462577|gb|EFK26070.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           187-1]
 gi|300524526|gb|EFK45595.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           119-7]
 gi|300531065|gb|EFK52127.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           107-1]
 gi|300839526|gb|EFK67286.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           124-1]
 gi|300845562|gb|EFK73322.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           78-1]
 gi|301073857|gb|EFK88663.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           146-1]
 gi|305853627|gb|EFM54066.1| succinyl-CoA synthetase subunit beta [Escherichia coli NC101]
 gi|306905706|gb|EFN36234.1| succinyl-CoA synthetase, beta subunit [Escherichia coli W]
 gi|307552579|gb|ADN45354.1| succinyl-CoA synthetase beta chain with ATP-grasp domain
           [Escherichia coli ABU 83972]
 gi|307627858|gb|ADN72162.1| succinyl-CoA synthetase subunit beta [Escherichia coli UM146]
 gi|308118964|gb|EFO56226.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           145-7]
 gi|309700949|emb|CBJ00246.1| succinyl-CoA synthetase beta chain [Escherichia coli ETEC H10407]
 gi|312945252|gb|ADR26079.1| succinyl-CoA synthetase subunit beta [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|313649631|gb|EFS14055.1| succinyl-CoA synthetase beta chain [Shigella flexneri 2a str.
           2457T]
 gi|315059970|gb|ADT74297.1| succinyl-CoA synthetase, beta subunit [Escherichia coli W]
 gi|315135383|dbj|BAJ42542.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           DH1]
 gi|315257645|gb|EFU37613.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           85-1]
 gi|315287158|gb|EFU46570.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           110-3]
 gi|315292641|gb|EFU51993.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           153-1]
 gi|315299270|gb|EFU58522.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           16-3]
 gi|315614602|gb|EFU95244.1| succinyl-CoA synthetase beta chain [Escherichia coli 3431]
 gi|320179432|gb|EFW54389.1| Succinyl-CoA ligase [ADP-forming] beta chain [Shigella boydii ATCC
           9905]
 gi|320193122|gb|EFW67762.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           O157:H7 str. EC1212]
 gi|320194115|gb|EFW68747.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           WV_060327]
 gi|320198154|gb|EFW72758.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           EC4100B]
 gi|320637975|gb|EFX07744.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           G5101]
 gi|320643370|gb|EFX12550.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H- str.
           493-89]
 gi|320648719|gb|EFX17352.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H- str.
           H 2687]
 gi|320654303|gb|EFX22356.1| succinyl-CoA synthetase subunit beta [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320664760|gb|EFX31898.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153759|gb|EFZ40006.1| succinyl-CoA synthetase beta chain [Escherichia coli EPECa14]
 gi|323158777|gb|EFZ44790.1| succinyl-CoA synthetase beta chain [Escherichia coli E128010]
 gi|323163886|gb|EFZ49696.1| succinyl-CoA synthetase beta chain [Shigella sonnei 53G]
 gi|323170847|gb|EFZ56497.1| succinyl-CoA synthetase beta chain [Escherichia coli LT-68]
 gi|323185114|gb|EFZ70480.1| succinyl-CoA synthetase beta chain [Escherichia coli 1357]
 gi|323379470|gb|ADX51738.1| succinyl-CoA synthetase, beta subunit [Escherichia coli KO11]
 gi|323938305|gb|EGB34562.1| succinate-CoA ligase [Escherichia coli E1520]
 gi|323942949|gb|EGB39113.1| succinate-CoA ligase [Escherichia coli E482]
 gi|323947008|gb|EGB43022.1| succinate-CoA ligase [Escherichia coli H120]
 gi|323952714|gb|EGB48582.1| succinate-CoA ligase [Escherichia coli H252]
 gi|323958472|gb|EGB54178.1| succinate-CoA ligase [Escherichia coli H263]
 gi|323963108|gb|EGB58678.1| succinate-CoA ligase [Escherichia coli H489]
 gi|323967434|gb|EGB62854.1| succinate-CoA ligase [Escherichia coli M863]
 gi|323972012|gb|EGB67232.1| succinate-CoA ligase [Escherichia coli TA007]
 gi|323976302|gb|EGB71392.1| succinate-CoA ligase [Escherichia coli TW10509]
 gi|324009579|gb|EGB78798.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           57-2]
 gi|324010449|gb|EGB79668.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           60-1]
 gi|324020366|gb|EGB89585.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           117-3]
 gi|324114837|gb|EGC08805.1| succinate-CoA ligase [Escherichia fergusonii B253]
 gi|324116268|gb|EGC10189.1| succinate-CoA ligase [Escherichia coli E1167]
 gi|325498098|gb|EGC95957.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia
           fergusonii ECD227]
 gi|326341534|gb|EGD65324.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           O157:H7 str. 1044]
 gi|326345752|gb|EGD69491.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           O157:H7 str. 1125]
 gi|327254406|gb|EGE66028.1| succinyl-CoA synthetase beta chain [Escherichia coli STEC_7v]
 gi|330910476|gb|EGH38986.1| succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           AA86]
 gi|331038026|gb|EGI10246.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H736]
 gi|331044628|gb|EGI16755.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M605]
 gi|331050003|gb|EGI22061.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M718]
 gi|331054993|gb|EGI27002.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA206]
 gi|331060502|gb|EGI32466.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA143]
 gi|331070437|gb|EGI41801.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA280]
 gi|331075902|gb|EGI47199.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H591]
 gi|331080582|gb|EGI51758.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H299]
 gi|332093788|gb|EGI98842.1| succinyl-CoA synthetase beta chain [Shigella boydii 5216-82]
 gi|332096513|gb|EGJ01509.1| succinyl-CoA synthetase beta chain [Shigella dysenteriae 155-74]
 gi|332104777|gb|EGJ08123.1| succinyl-CoA synthetase subunit beta [Shigella sp. D9]
 gi|332760907|gb|EGJ91195.1| succinyl-CoA synthetase beta chain [Shigella flexneri 4343-70]
 gi|332761279|gb|EGJ91565.1| succinyl-CoA synthetase beta chain [Shigella flexneri 2747-71]
 gi|332763954|gb|EGJ94192.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-671]
 gi|332768175|gb|EGJ98360.1| succinyl-CoA synthetase, &beta subunit [Shigella flexneri 2930-71]
 gi|333007363|gb|EGK26843.1| succinyl-CoA synthetase beta chain [Shigella flexneri VA-6]
 gi|333007779|gb|EGK27255.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-218]
 gi|333021484|gb|EGK40734.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-304]
          Length = 388

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|260914171|ref|ZP_05920644.1| succinyl-CoA ligase subunit beta [Pasteurella dagmatis ATCC 43325]
 gi|260631804|gb|EEX49982.1| succinyl-CoA ligase subunit beta [Pasteurella dagmatis ATCC 43325]
          Length = 388

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV KG    + + A  AIK L G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAEYQLPVGKGYACKNANEAADAIKKLNGDVWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   + LG  L+T QT   G  VN +YVE+G+ I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFADQWLGKRLVTFQTDANGQPVNTIYVEEGSSIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+ ST+GG++IEEVA+  P  + K+ IDPL G        L   L L+
Sbjct: 111 GAVLDRASQRVVFMVSTEGGVNIEEVAEKTPHLLHKMAIDPLTGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  + K F +KD++LLE+NPL++ K G L  LD+KI  D NALYR   ++
Sbjct: 171 GDQIKQFAHIFVQIAKMFVEKDLALLEVNPLVVTKEGNLLCLDAKIVVDSNALYRQPVLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A+ H L+Y+AL+GNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 AMQDPSQEDPREALAESHQLNYVALEGNIGCMVNGAGLAMGTMDIIKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSAVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SG+N+I A  L DA+ + V A +G
Sbjct: 351 GNNAPLGREILANSGVNIIAANTLTDASIQAVKAAEG 387


>gi|224824504|ref|ZP_03697611.1| succinyl-CoA synthetase, beta subunit [Lutiella nitroferrum 2002]
 gi|224602997|gb|EEG09173.1| succinyl-CoA synthetase, beta subunit [Lutiella nitroferrum 2002]
          Length = 389

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 271/396 (68%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY +PV +G++  S   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAKYGLPVQQGILAHSPEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +      + ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSREEAAEVAKTLIGTNLVTYQTDAAGQPVNSVLVCEDMYPVQRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR S  V F+ ST+GG++IE+VA++ P+KI K+ ++PL+G+           L L
Sbjct: 111 LGAVVDRGSQRVVFMVSTEGGVEIEKVAEETPEKIIKVEVNPLVGMQPFQARDCAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+   +   L    Y+AF   D +L E+NPL + +NG L  +D KI+ D NALYRH ++
Sbjct: 171 SGKQVGEFTKLMLGAYEAFVANDFALFEVNPLALRENGELACVDGKINLDSNALYRHPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 LAQRDKSQENEREVKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D+SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILADTSVKGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILDESGLKLTSAQGLNDAAEKIVAAV 386


>gi|237730691|ref|ZP_04561172.1| succinyl-CoA synthetase subunit beta [Citrobacter sp. 30_2]
 gi|226906230|gb|EEH92148.1| succinyl-CoA synthetase subunit beta [Citrobacter sp. 30_2]
          Length = 388

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEHWLGKRLVTYQTDAHGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVVTKQGDLICLDGKLGADGNALFRQADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|226500228|ref|NP_001151193.1| succinyl-CoA ligase beta-chain [Zea mays]
 gi|194701268|gb|ACF84718.1| unknown [Zea mays]
 gi|195644938|gb|ACG41937.1| succinyl-CoA ligase beta-chain [Zea mays]
          Length = 422

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 265/397 (66%), Gaps = 8/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SVH  + A+K + P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVHEVKDALKNMFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVR-VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK   +  +GGV  V++    +I+   ++LG  LITKQTGP G  V+ VY+ +   +  E
Sbjct: 88  FK---SGLQGGVHIVKAEEAELIAS--KMLGQILITKQTGPEGKIVSKVYLCEKLSLTNE 142

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ ID   G+T ED A + D L
Sbjct: 143 MYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDAAKVVDGL 202

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  
Sbjct: 203 ALKAADRQSSIEQIKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQK 262

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 263 EIFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 322

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+
Sbjct: 323 DVGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVV 382

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           RLEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 383 RLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419


>gi|226510248|ref|NP_001150653.1| succinyl-CoA ligase beta-chain [Zea mays]
 gi|195640872|gb|ACG39904.1| succinyl-CoA ligase beta-chain [Zea mays]
 gi|223975143|gb|ACN31759.1| unknown [Zea mays]
          Length = 422

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 262/396 (66%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SV     A+K + P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVQEVNDALKNMFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +  + +   S  R++LG  L+TKQTGP G  V+ VY+ +   +  E+
Sbjct: 88  FK---SGLQGGVHIVKA-EEAESIARKMLGQILVTKQTGPEGKIVSKVYLCEKLSLTNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ +D   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPVDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 LKSADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419


>gi|291612996|ref|YP_003523153.1| succinyl-CoA synthetase, subunit beta [Sideroxydans lithotrophicus
           ES-1]
 gi|291583108|gb|ADE10766.1| succinyl-CoA synthetase, beta subunit [Sideroxydans lithotrophicus
           ES-1]
          Length = 389

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 189/384 (49%), Positives = 262/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR+++VP  +G+   +V  A +A K L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILREFSVPTPRGMACFNVEEAVAAAKQLGGNVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G  V+ + +E+GA I RE Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRQFASQILGMHLVTHQTGPEGQVVHRLLIEEGARIAREFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR S  VA +AS++GGM+IEEVAK  P+KI  + IDP  G+   +       + + 
Sbjct: 111 GMVVDRGSQRVALLASSEGGMEIEEVAKHSPEKIHTVRIDPATGLNEAEAVRTARAIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   +   LY+AF +KD  L EINPL++  + R+  LD+K +FD NALYRH +I 
Sbjct: 171 DAAIAEAVKVLWGLYQAFVEKDAMLAEINPLVLTADNRVLALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  EIEA + +LSYI LDG+IGC+VNGAGLAMATMDIIKLYGG+PANFLDVG
Sbjct: 231 ALRDLDEEDPAEIEASKFDLSYIQLDGDIGCLVNGAGLAMATMDIIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK++  +  +K IL+NIFGGIM+CDV+ +G+++A +EV + +PLV+RLE
Sbjct: 291 GGASKEKVTEAFKLMLKNPHLKAILVNIFGGIMKCDVIAEGVVAAAREVHLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G +++AESGL +I+  D+
Sbjct: 351 GTNVELGKKILAESGLPIISGNDM 374


>gi|71064686|ref|YP_263413.1| succinyl-CoA synthetase subunit beta [Psychrobacter arcticus 273-4]
 gi|123649831|sp|Q4FVH9|SUCC_PSYA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71037671|gb|AAZ17979.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychrobacter
           arcticus 273-4]
          Length = 388

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 200/397 (50%), Positives = 276/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+ Y +P+ +G++  S   A +A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLKSYGLPIQEGLIAYSGDEAAAAFDKTPTDIAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +       E++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLVKTREEAKQVTDELIGTNLVTYQTDAAGQPVNFVLVAEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KIFK+ IDPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIFKVSIDPLVGLLPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    Y+AF + D+ LLEINPL + +NG +  +D KIS D NALYR   I
Sbjct: 171 EGKQISQFVKLMTGAYQAFVENDIDLLEINPLAVRENGEIVCVDGKISIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALQDKSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII  DSSV+G+LINIFGGI+RCD++ + I++A+KEV + +P+V+RL
Sbjct: 291 GGGATKDRVVEAFKIILEDSSVEGVLINIFGGIVRCDMIAEAIIAAIKEVDVKVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +++ ESGL +I+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAKILEESGLKLISAQGLSDAAQKIVDAVK 387


>gi|694121|gb|AAA62654.1| malate thiokinase [Methylobacterium extorquens AM1]
          Length = 390

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGLKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PL++RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESGL++ITA  L +AA+K V A  G
Sbjct: 351 GTNVDEGKKILAESGLDLITADTLTEAARKAVEACHG 387


>gi|121609683|ref|YP_997490.1| succinyl-CoA synthetase subunit beta [Verminephrobacter eiseniae
           EF01-2]
 gi|189030224|sp|A1WLG5|SUCC_VEREI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|121554323|gb|ABM58472.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 388

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 194/402 (48%), Positives = 260/402 (64%), Gaps = 20/402 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS----TLITKQTGPTGSRVNCVYVEDGADILR 116
                   G      L   I ++R + GS     L T QTGP G +V  +Y+E+GADI +
Sbjct: 52  -----GGRGKGGGVQLAKTIDEVRRLAGSMLGMQLKTHQTGPEGQKVRRLYIEEGADIGK 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS++ DR +  +AFIAS++GGMDIEEV +  P+ I    +DPL G+  E    +   
Sbjct: 107 EYYLSIVTDRATQKLAFIASSEGGMDIEEVKRAKPEMIITEFVDPLAGLGPEQALKIAVG 166

Query: 177 LELQGQARIDGG--DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           + L   A+      D+   LY+ + D D SLLEINPL      RL  LD+K +FD NAL+
Sbjct: 167 IGLPAPAQAQAQAVDIMRRLYQCYMDTDASLLEINPLNCDGQNRLTALDAKFNFDANALW 226

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           RH +I   RD  EED  E+ A + +L+YI++DGNIGC+VNGAGLAMATMD IKL+GGAPA
Sbjct: 227 RHPEIVAYRDFEEEDPAEVLASKFDLAYISMDGNIGCLVNGAGLAMATMDTIKLFGGAPA 286

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA  +KV  AFKI+  +  VKGIL+NIFGGIMRCD +  G++SA K V +++P
Sbjct: 287 NFLDVGGGATAEKVTEAFKIMLGNPKVKGILVNIFGGIMRCDTIATGVISACKAVNLSVP 346

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LV+R++G N + G +L+AESGL +I A  + DAAQ+IV AV+
Sbjct: 347 LVVRMKGTNEEPGKKLLAESGLPIIAADTMADAAQRIVAAVR 388


>gi|269103073|ref|ZP_06155770.1| succinyl-CoA ligase [ADP-forming] beta chain [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162971|gb|EEZ41467.1| succinyl-CoA ligase [ADP-forming] beta chain [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 388

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G   S+   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACSTPQEAAEAAGKIGGEKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + + +  ++ LG  L+T QT   G  V+ + VE  ++I  ELYL
Sbjct: 58  -------GGVELHETKEGIKTFSQQWLGKHLVTYQTDANGQPVSKILVEAASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASQRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLEINPL+I  +G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTQIFLGLGKMFTDYDLALLEINPLVITDDGNLLCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIAEGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G   +AESGLN+I A  L +AA+K+V A +G
Sbjct: 351 GNNAELGAAKLAESGLNIIAATSLTEAAEKVVQAAEG 387


>gi|153005045|ref|YP_001379370.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5]
 gi|152028618|gb|ABS26386.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 387

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 196/386 (50%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LR++ V V +G +  +   AE A + L G +  VK+QIHA         
Sbjct: 1   MKIHEYQAKDILRRFGVAVPRGYLAVTPLEAEGAARQLGGGICAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S          +LG  L T QTGP G  V  VY+E+G  I RELYL
Sbjct: 52  -GGRGKGGGVRLARSPDEARQHAEAMLGMMLKTPQTGPEGQEVRKVYIEEGCRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +G +A +AS +GG+DIEEVAK +P+KI +  IDPLIG+       L   L L 
Sbjct: 111 GMTLDREAGRLAVMASIEGGVDIEEVAKRHPEKILREWIDPLIGLMPYQARRLAFGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          L+ A+   D SL EINPL+I   G +  LD+K++FDDNALYRH DI 
Sbjct: 171 GDSVGAFVRFATGLHNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYRHADIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED +E  AK+++LSYIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPDEEDPKETTAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+DKV AA KII SD +V+ +L+NIFGGIM+CDV+  GI++A ++V + +PLV+RLE
Sbjct: 291 GGADEDKVTAALKIILSDPAVRAVLVNIFGGIMKCDVIANGIVAAARQVGLALPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV++G  ++A S L++I A DL D
Sbjct: 351 GTNVELGKEILAHSELDIIPADDLGD 376


>gi|152996809|ref|YP_001341644.1| succinyl-CoA synthetase subunit beta [Marinomonas sp. MWYL1]
 gi|189081747|sp|A6VZ30|SUCC_MARMS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150837733|gb|ABR71709.1| succinyl-CoA synthetase, beta subunit [Marinomonas sp. MWYL1]
          Length = 388

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ G  + +  AA  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGYAVDTPEAAVEAAKKIGGNKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +  +  LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVDSYEEVAAFTQNWLGKNLVTYQTDANGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL+G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGAQPYQARELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L + F D D +LLEINPL+I   G L  LD KI  D NA+YR   +Q
Sbjct: 171 PTQIKQFTKVFLGLSQMFHDYDFALLEINPLVITDEGNLHCLDGKIGIDSNAVYRQKKMQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDEREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AV++V +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G  ++A SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAEKGREVLANSGLDIIAATSLKDAAEQVVKAAEG 387


>gi|320659936|gb|EFX27478.1| succinyl-CoA synthetase subunit beta [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 388

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDLREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|262041210|ref|ZP_06014422.1| succinyl-CoA ligase subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041439|gb|EEW42498.1| succinyl-CoA ligase subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 388

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+A DGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVAQDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|224065571|ref|XP_002301863.1| predicted protein [Populus trichocarpa]
 gi|222843589|gb|EEE81136.1| predicted protein [Populus trichocarpa]
          Length = 421

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/396 (48%), Positives = 267/396 (67%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV ++S+H  + A++   P     VVKSQ+ AGGRG G+
Sbjct: 27  LNIHEYQGAGLMGKYGINVPKGVAVASLHHVQKALQYVFPSESELVVKSQVLAGGRGLGK 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +  + K V     ++LG  L+TKQTG  G  V+ VY+ +   ++ E+
Sbjct: 87  FKN---GFQGGVHIVKTDK-VEETAGKMLGQILVTKQTGSQGKIVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++++DRT+     IA  +GG  IE++A+ +P  I K+ ID   G+T ED   + D L 
Sbjct: 143 YFAIMLDRTTAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDAVKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LYK FC+ D +LLEINP+    + +L   D+K++FDDNA +R  +
Sbjct: 203 PKVADRNDSIEQVKKLYKLFCESDCTLLEINPIAETSDKQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 IFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A +++V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 323 VGGNASEEQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 383 LEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKA 418


>gi|260582125|ref|ZP_05849919.1| transcriptional regulator CysB [Haemophilus influenzae NT127]
 gi|260094757|gb|EEW78651.1| transcriptional regulator CysB [Haemophilus influenzae NT127]
          Length = 389

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------SGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFIGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|104782658|ref|YP_609156.1| succinyl-CoA synthetase subunit beta [Pseudomonas entomophila L48]
 gi|170722673|ref|YP_001750361.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida W619]
 gi|122402609|sp|Q1I7L3|SUCC_PSEE4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734975|sp|B1JAV3|SUCC_PSEPW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|95111645|emb|CAK16366.1| succinyl-CoA synthetase beta chain [Pseudomonas entomophila L48]
 gi|169760676|gb|ACA73992.1| succinyl-CoA synthetase, beta subunit [Pseudomonas putida W619]
          Length = 388

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D+RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|254498639|ref|ZP_05111357.1| succinyl CoA synthetase beta chain [Legionella drancourtii LLAP12]
 gi|254352087|gb|EET10904.1| succinyl CoA synthetase beta chain [Legionella drancourtii LLAP12]
          Length = 386

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   YN+PV  G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASYNLPVPHGEVAYNVEDALQVASQLSTTRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   + + ++ +LG+ L+T QT   G  VN V VE+  +I RELYL
Sbjct: 58  -------GGVKLVSNKDELAAAVKALLGTRLVTYQTDAHGQPVNAVLVEETCEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA++ P+KIFK+++DPL+GV           L L 
Sbjct: 111 GAVVDRATRRVVIMASTEGGVEIEKVAEETPEKIFKVVVDPLVGVMPFQAREAGFKLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL++ + G+L  LD KI+ D NALYR   ++
Sbjct: 171 DAQIKQFTHLMLGLGKMFVECDLSLLEINPLVVTQAGQLICLDGKINIDGNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE  A    L+YI LDG+IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 SMRDTSQEDERENRASDWELNYIPLDGSIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIILSDDKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N  +G  ++ +S LNVI A  L D
Sbjct: 351 GNNAQLGADILNKSDLNVIAATSLTD 376


>gi|148828346|ref|YP_001293099.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae
           PittGG]
 gi|189030206|sp|A5UIW0|SUCC_HAEIG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148719588|gb|ABR00716.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae PittGG]
          Length = 394

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 193/396 (48%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGMDIEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+F  L + F +KD+SL+E+NPL++ + G L  LD+KI+ DDNAL+RH D+ 
Sbjct: 171 DAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKIAVDDNALFRHKDLS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N +IG +++AES +N++TA  L  A +  V+A K
Sbjct: 351 GTNAEIGRQILAESDVNILTAQSLQQATELAVNAAK 386


>gi|188534429|ref|YP_001908226.1| succinyl-CoA synthetase subunit beta [Erwinia tasmaniensis Et1/99]
 gi|226734952|sp|B2VBR6|SUCC_ERWT9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|188029471|emb|CAO97348.1| Succinyl-CoA synthetase beta chain [Erwinia tasmaniensis Et1/99]
          Length = 388

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT  +G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDASGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVVTKQGDLVCLDGKLTADGNALFRQSDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|148652081|ref|YP_001279174.1| succinyl-CoA synthetase subunit beta [Psychrobacter sp. PRwf-1]
 gi|189081775|sp|A5WC33|SUCC_PSYWF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148571165|gb|ABQ93224.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychrobacter
           sp. PRwf-1]
          Length = 389

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 267/397 (67%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +P+ KG++  +   A  A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKLLLESYGLPIQKGIIAYNGEEAAEAFDKTPTDVAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLVKTREEAKEVAESLIGTNLVTYQTDAEGQPVNFVLVAEDMYPVKTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+KIF + +DPL+G+       +   L L
Sbjct: 111 LGAVVDRATRRVTFMASTEGGVEIEKVAEETPEKIFSITVDPLVGLLPFQAREVGFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    YKAF + D  ++EINPL + +NG L  +D KI  D NAL+R   I
Sbjct: 171 EGKQINQFVKLMTGAYKAFVENDFDMIEINPLAVRENGELACVDGKIGVDSNALFRQPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALHDPSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII  DSSV+G+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKDRVVEAFKIILEDSSVQGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ES + +I+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAKLLDESDVEIISAQGLSDAAQKIVDAVK 387


>gi|119476709|ref|ZP_01617019.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2143]
 gi|119449965|gb|EAW31201.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2143]
          Length = 388

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG    +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYACDTPEEAAQAADKIGGNKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + + S     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDSKEEIKSFAENWLGKNLVTYQTDENGQPVSKILVEACTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA + P+KI +  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVADETPEKILRAEIDPLVGAQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++F  L K F DKD++L+E+NPL+I   G L  LD+K+  D NA+YR   ++
Sbjct: 171 GVQIKQFVNIFLGLAKLFQDKDLALIEVNPLVITDEGNLHCLDAKLGVDSNAMYRQPTLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDTVKAVLVNIFGGIVRCDLIAEGIIGAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++L+AESGLN+I A  L +AA  +V A +G
Sbjct: 351 GNNAELGSKLLAESGLNIIAANSLKEAADAVVKAAEG 387


>gi|306815831|ref|ZP_07449976.1| succinyl-CoA synthetase beta chain [Escherichia coli NC101]
 gi|305850806|gb|EFM51262.1| succinyl-CoA synthetase beta chain [Escherichia coli NC101]
          Length = 389

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 263/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFATFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNETRITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRII 385


>gi|284007864|emb|CBA73773.1| succinyl-CoA synthetase beta chain [Arsenophonus nasoniae]
          Length = 388

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 188/386 (48%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G    +V  AE A   L    +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLLADYGLPVPTGYACKTVKEAEDATTKLGNGPWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V ++   V       LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNNRDEVRLFAENWLGKRLVTYQTDAHGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  + F+AST+GG++IE+VA+  P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVIDRATRRIVFMASTEGGVEIEKVAEQTPELIHKAIIDPLTGPMPYQARELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +LF  L   F  +D++L+EINPL+I K G L  LD K+S D NALYR  ++Q
Sbjct: 171 GKQVEQFSNLFIGLATIFLARDLALIEINPLVITKQGDLICLDGKLSVDSNALYRQAELQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 KLRDISQEDPREAHASEWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V  +L+NIFGGI+RCD++  GI+ AVKE+ + +P+++RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVKEIGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGL +  A  L D
Sbjct: 351 GNNAELGAQKLADSGLKITAATSLTD 376


>gi|170744591|ref|YP_001773246.1| malate--CoA ligase subunit beta [Methylobacterium sp. 4-46]
 gi|168198865|gb|ACA20812.1| succinyl-CoA synthetase, beta subunit [Methylobacterium sp. 4-46]
          Length = 392

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 187/398 (46%), Positives = 258/398 (64%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + VP+ KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVPIPKGAVAFSPDQAVYAATELGGWHWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  +   V    +++LG  L+T QTGP G  V  VY+E      RELYL
Sbjct: 58  -------GGIRLCKTYNEVRDAAKDLLGKRLVTHQTGPEGKPVQRVYIETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+   +   L   L L 
Sbjct: 111 GFVLDRKAERVRVIASQRGGMDIEEIAATDPEALLQVVVEPAVGLQQFEARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          + Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 171 IKQVGGAVKTIMSAYRAFRDCDATMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRTIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNL+YI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMYDPSQSDPREAQAAEHNLNYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EV+I +PLV+RL 
Sbjct: 291 GGASPQRVATAFRLVLSDPNVKAILVNIFAGINRCDWIAQGVIQAAQEVQIGVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G  ++ +SGL++ITA  L +AAQK V AVKG 
Sbjct: 351 GTNVEAGKAILEKSGLDLITADTLTEAAQKAVQAVKGT 388


>gi|110804645|ref|YP_688165.1| succinyl-CoA synthetase subunit beta [Shigella flexneri 5 str.
           8401]
 gi|123048359|sp|Q0T6W6|SUCC_SHIF8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110614193|gb|ABF02860.1| succinyl-CoA synthetase, beta subunit [Shigella flexneri 5 str.
           8401]
          Length = 388

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED R  +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPRAAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|91213587|ref|YP_543573.1| SucC, succinyl-CoA synthetase subunit beta [Escherichia coli UTI89]
 gi|117626330|ref|YP_859653.1| SucC, succinyl-CoA synthetase beta chain [Escherichia coli APEC O1]
 gi|218561133|ref|YP_002394046.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           S88]
 gi|237703620|ref|ZP_04534101.1| SucC [Escherichia sp. 3_2_53FAA]
 gi|331660624|ref|ZP_08361556.1| succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           TA206]
 gi|91075161|gb|ABE10042.1| SucC, succinyl-CoA synthetase beta chain [Escherichia coli UTI89]
 gi|115515454|gb|ABJ03529.1| SucC, succinyl-CoA synthetase beta chain [Escherichia coli APEC O1]
 gi|218367902|emb|CAR05697.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           S88]
 gi|222035770|emb|CAP78515.1| SucC, succinyl-CoA synthetase beta chain (EC62 15) [Escherichia
           coli LF82]
 gi|226901532|gb|EEH87791.1| SucC [Escherichia sp. 3_2_53FAA]
 gi|294492570|gb|ADE91326.1| succinyl-CoA synthetase, beta subunit [Escherichia coli IHE3034]
 gi|307629112|gb|ADN73416.1| succinyl-CoA synthetase beta chain [Escherichia coli UM146]
 gi|312948635|gb|ADR29462.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315287844|gb|EFU47246.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           110-3]
 gi|315297529|gb|EFU56808.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           16-3]
 gi|323950393|gb|EGB46274.1| succinate-CoA ligase [Escherichia coli H252]
 gi|323954475|gb|EGB50259.1| succinate-CoA ligase [Escherichia coli H263]
 gi|324007782|gb|EGB77001.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           57-2]
 gi|331051666|gb|EGI23705.1| succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           TA206]
          Length = 389

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 263/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFATFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRII 385


>gi|18655528|pdb|1JLL|B Chain B, Crystal Structure Analysis Of The E197betaa Mutant Of E.
           Coli Scs
 gi|18655530|pdb|1JLL|E Chain E, Crystal Structure Analysis Of The E197betaa Mutant Of E.
           Coli Scs
          Length = 388

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+ INPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIAINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|78221949|ref|YP_383696.1| succinyl-CoA synthetase subunit beta [Geobacter metallireducens
           GS-15]
 gi|78193204|gb|ABB30971.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
          Length = 385

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 191/393 (48%), Positives = 260/393 (66%), Gaps = 11/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y++PV +G V  +    E A K + G   V+K+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSSYSIPVPRGRVALTSDQVERAAKEMGGRC-VIKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  L+T QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDYGKELFGKRLVTPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GG+DIEEVA+  P+KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRATSRYCLIASAEGGVDIEEVAQKSPEKIHVLTIDPYTGLRPYLARKIALALGLT 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLYK   DKD SL+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSLCEDCVELMLNLYKVVLDKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAVFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K YGG PANFLDVG
Sbjct: 230 DMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMATLDVLKEYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D+ VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILEDADVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G+ V  G +L+ +SGLNV TA  L + A++IV 
Sbjct: 350 GSKVLEGKQLLVDSGLNVQTADSLGEGAERIVQ 382


>gi|308050195|ref|YP_003913761.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ferrimonas
           balearica DSM 9799]
 gi|307632385|gb|ADN76687.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ferrimonas
           balearica DSM 9799]
          Length = 388

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAEYGLPVSEGYACDTPQEAAEAAGKIGGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS + +    +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLASSKEEIREFAQHWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRGSQRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D +LLEINPL+I + G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTKIFMGLGQMFLDLDFALLEINPLVITEQGNLHCLDGKINIDSNALYRQPKVR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +AESGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGAQKLAESGLNIIAANSLTDAAQQVVKAAE 386


>gi|238756025|ref|ZP_04617349.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia ruckeri
           ATCC 29473]
 gi|238705750|gb|EEP98143.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia ruckeri
           ATCC 29473]
          Length = 388

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 193/395 (48%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGFACSTPREAEEAASKIGSAPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEQWLGKQLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRASRRVIFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLAALFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|26990878|ref|NP_746303.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida KT2440]
 gi|148546906|ref|YP_001267008.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida F1]
 gi|325275365|ref|ZP_08141313.1| succinyl-CoA synthetase subunit beta [Pseudomonas sp. TJI-51]
 gi|81439975|sp|Q88FB2|SUCC_PSEPK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081771|sp|A5W114|SUCC_PSEP1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|24985891|gb|AAN69767.1|AE016613_2 succinyl-CoA synthetase, beta subunit [Pseudomonas putida KT2440]
 gi|148510964|gb|ABQ77824.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pseudomonas
           putida F1]
 gi|313497968|gb|ADR59334.1| SucC [Pseudomonas putida BIRD-1]
 gi|324099509|gb|EGB97407.1| succinyl-CoA synthetase subunit beta [Pseudomonas sp. TJI-51]
          Length = 388

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKIGGNEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D+RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|146215968|gb|ABQ10186.1| succinyl-CoA ligase beta subunit [Caragana jubata]
          Length = 421

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 196/399 (49%), Positives = 266/399 (66%), Gaps = 8/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V +GV +SS+     AIK +       VVKS+I AGGRG G 
Sbjct: 28  LNIHEYQGAELMSKYGVNVPRGVAVSSIEEVRKAIKDVFANQNEVVVKSRILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK   +  +GGV +  +    + D+  ++LG  L+TKQTGP G  V+ VY+ +   ++ E
Sbjct: 88  FK---SGLQGGVHIVKT--DQVEDLAGKMLGQILVTKQTGPQGKVVSKVYLCEKLSLVNE 142

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y ++ +DR +     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L
Sbjct: 143 MYFAITLDRKTAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFEGITDEDAAKVVDGL 202

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +G  R    +   NLYK F + D +LLEINP+    + +L   D+K++FDDNA YR  
Sbjct: 203 APKGADRNKSIEQVKNLYKLFVESDCTLLEINPIAETADNQLVAADAKLNFDDNAAYRQK 262

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I +LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 263 GIFKLRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 322

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+T+D  V+ IL+NIFGGIM+CDV+  GI++A K+V + +P+V+
Sbjct: 323 DVGGNASEGQVVEAFKILTADDKVEAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVV 382

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RLEG NVD G R++ ESGL +ITA DLDDAAQK V A K
Sbjct: 383 RLEGTNVDQGKRILKESGLALITAEDLDDAAQKAVKAYK 421


>gi|149374983|ref|ZP_01892756.1| succinyl-CoA synthetase subunit beta [Marinobacter algicola DG893]
 gi|149360872|gb|EDM49323.1| succinyl-CoA synthetase subunit beta [Marinobacter algicola DG893]
          Length = 388

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++GV   +   A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSQGVACDTPQEAVAAATEIGGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKDEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIEQVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D+D++LLEINPL+I   G L  LD+KI  D NALYR   I 
Sbjct: 171 GKQIGQFTKIFMGLAKLFEDRDLALLEINPLVITPAGDLHCLDAKIGVDGNALYRQKKIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+EDSRE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 EMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD SVK +L+NIFGGI+RCD++ +GI+ AVK+V + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDSVKAVLVNIFGGIVRCDMIAEGIIGAVKDVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G +++A+SGLN+I A  L DAA+++V A  G
Sbjct: 351 GNNAEKGTQVLADSGLNIIAATSLADAAEQVVKAAGG 387


>gi|6980728|pdb|1CQI|B Chain B, Crystal Structure Of The Complex Of Adp And Mg2+ With
           Dephosphorylated E. Coli Succinyl-Coa Synthetase
 gi|6980730|pdb|1CQI|E Chain E, Crystal Structure Of The Complex Of Adp And Mg2+ With
           Dephosphorylated E. Coli Succinyl-Coa Synthetase
 gi|6980732|pdb|1CQJ|B Chain B, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa
           Synthetase
 gi|6980734|pdb|1CQJ|E Chain E, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa
           Synthetase
          Length = 385

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 195/395 (49%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAV 385


>gi|315633948|ref|ZP_07889237.1| succinyl-CoA ligase subunit beta [Aggregatibacter segnis ATCC
           33393]
 gi|315477198|gb|EFU67941.1| succinyl-CoA ligase subunit beta [Aggregatibacter segnis ATCC
           33393]
          Length = 389

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y +PV KG+   +   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFAEYKLPVGKGIACKTADEAAEAIKQLDGDVWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +YVE+G+ I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFANKWLGQRLVTFQTDANGQPVNTIYVEEGSQIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+ ST+GGM+IEEVA   P  + K+ IDPL G        L   L L+
Sbjct: 111 GAVLDRASQRVVFMVSTEGGMNIEEVAAKTPHLLHKMAIDPLTGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  + K F ++D+SLLE+NPL++ K G L  LD+KI  D NALYR   + 
Sbjct: 171 GDQVKQFAHIFTQMAKMFVERDLSLLEVNPLVVTKEGNLLCLDAKIVVDGNALYRQPALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A+   L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMQDPSQEDPREALAESFQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N  +G  ++A+SGLN+I A  L DAA + V A K
Sbjct: 351 GNNAPLGREILAKSGLNIIAAQTLTDAAVESVKAAK 386


>gi|331650070|ref|ZP_08351143.1| succinate-CoA ligase, beta subunit [Escherichia coli M605]
 gi|331041015|gb|EGI13172.1| succinate-CoA ligase, beta subunit [Escherichia coli M605]
          Length = 389

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 263/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNETRITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRII 385


>gi|26250848|ref|NP_756888.1| succinyl-CoA synthetase subunit beta [Escherichia coli CFT073]
 gi|218692340|ref|YP_002400552.1| Succinyl-CoA synthetase subunit beta (SCS-beta) [Escherichia coli
           ED1a]
 gi|227886929|ref|ZP_04004734.1| succinyl-CoA synthetase beta chain [Escherichia coli 83972]
 gi|300992977|ref|ZP_07180132.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|301047014|ref|ZP_07194123.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|26111279|gb|AAN83462.1|AE016770_262 Succinyl-CoA synthetase beta chain [Escherichia coli CFT073]
 gi|218429904|emb|CAR10733.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           ED1a]
 gi|227836070|gb|EEJ46536.1| succinyl-CoA synthetase beta chain [Escherichia coli 83972]
 gi|300301059|gb|EFJ57444.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|300406751|gb|EFJ90289.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|307556209|gb|ADN48984.1| succinyl-CoA synthetase subunit beta [Escherichia coli ABU 83972]
 gi|315291543|gb|EFU50903.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           153-1]
 gi|320193417|gb|EFW68054.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           WV_060327]
 gi|323190079|gb|EFZ75357.1| succinyl-CoA synthetase beta chain [Escherichia coli RN587/1]
          Length = 389

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 263/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRII 385


>gi|167034752|ref|YP_001669983.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida GB-1]
 gi|189081772|sp|B0KNW8|SUCC_PSEPG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|166861240|gb|ABY99647.1| succinyl-CoA synthetase, beta subunit [Pseudomonas putida GB-1]
          Length = 388

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEAAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAAQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKIIKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F + D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFKEHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A    L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAASFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|301629461|ref|XP_002943858.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta-like,
           partial [Xenopus (Silurana) tropicalis]
          Length = 358

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 190/367 (51%), Positives = 247/367 (67%), Gaps = 10/367 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR   VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNSGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     +ILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDEVKQLSEQILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS+QGGMDIEEVA   P+KI    IDPL G+T++    +   + L 
Sbjct: 111 SLVTDRATQKVAFIASSQGGMDIEEVAHATPEKIITEYIDPLTGITADQSRKIAAAIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     DLF  LY+ + D D SL+EINPL     G+L  LD+K +FD NAL+RH +I 
Sbjct: 171 GGSVEQAVDLFARLYQCYMDTDASLVEINPLNCDSTGKLIALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIG 367
           G N ++G
Sbjct: 351 GTNEELG 357


>gi|226941329|ref|YP_002796403.1| succinyl-CoA synthetase subunit beta [Laribacter hongkongensis
           HLHK9]
 gi|254778442|sp|C1DB55|SUCC_LARHH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226716256|gb|ACO75394.1| SucC [Laribacter hongkongensis HLHK9]
          Length = 388

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 270/396 (68%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY +PV +G++ S+   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAKYGLPVQQGILASNADEAAAAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSREEAADVAATLIGKNLVTYQTDANGQPVNSVLVCEDMYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEEVAHNTPEKILKVTVDPLVGLLPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    Y+AF + D +L EINPL +  NG L  +D+K+  D NALYR   +
Sbjct: 171 KDKQVNEFVKLMTGAYRAFVENDFALFEINPLAVRANGALACVDAKVGIDSNALYRLPAV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILADPSVKGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G RL+ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGARLLEESGLKLTSAQGLNDAAEKIVAAV 386


>gi|110644396|ref|YP_672126.1| succinyl-CoA synthetase beta chain [Escherichia coli 536]
 gi|110345988|gb|ABG72225.1| succinyl-CoA synthetase beta chain [Escherichia coli 536]
          Length = 389

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 263/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRII 385


>gi|71908976|ref|YP_286563.1| succinyl-CoA synthetase subunit beta [Dechloromonas aromatica RCB]
 gi|123626638|sp|Q47AN8|SUCC_DECAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71848597|gb|AAZ48093.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Dechloromonas
           aromatica RCB]
          Length = 386

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 189/396 (47%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L+K+ V V +G+  ++V  A  A +TL G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKQILKKFGVTVPRGIHCTTVEDAVKAAETLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +SL+ V     +ILG  L+T QTGP G +V  + +E+GADI  E Y+
Sbjct: 52  -GGRGKGGGVKVATSLEKVREYAGQILGMQLVTHQTGPEGQKVRHLLIEEGADIKHEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS +GGMDIEEVA   P+KI K+ ++PL+G+T E   +L   + + 
Sbjct: 111 AALTDRATQSVAIMASYEGGMDIEEVAHKTPEKIVKVFVNPLVGLTDEQALTLAKGMGMN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     +   +LY  + + D SL EINPLI   +G ++ LD+K +FD NALYR  +I 
Sbjct: 171 EASIPQCIETLKSLYTCYMETDASLAEINPLIHEGDGTVKALDAKFNFDSNALYRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EED  E+EA Q +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AMRDLDEEDPDEVEASQFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K   +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIAEGVVAAAKLTHLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++ +SGL +I+A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKILKDSGLPIISADSMAEAATKIVAAVK 386


>gi|146282241|ref|YP_001172394.1| succinyl-CoA synthetase subunit beta [Pseudomonas stutzeri A1501]
 gi|189081773|sp|A4VKQ1|SUCC_PSEU5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145570446|gb|ABP79552.1| succinyl-CoA synthetase beta chain [Pseudomonas stutzeri A1501]
 gi|327480489|gb|AEA83799.1| succinyl-CoA synthetase subunit beta [Pseudomonas stutzeri DSM
           4166]
          Length = 388

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + S   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDSPKEAAEACDKIGGTQWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  ++ L   L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKDEARAFAQQWLDKRLVTYQTDANGQPVSKILVEACTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRASRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPFQARELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GDQVKQFVHIFVGLAQLFQDYDLALLEVNPLVIKTDGNLHCLDAKINIDSNAIYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GGAPANFLDVG
Sbjct: 231 DMADPSQDDPREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATEERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVREVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G ++++ESGLN+I A  L DAA ++V A +G
Sbjct: 351 GNNADLGAKMLSESGLNIIGANSLTDAAIQVVKAAEG 387


>gi|259909076|ref|YP_002649432.1| succinyl-CoA synthetase subunit beta [Erwinia pyrifoliae Ep1/96]
 gi|224964698|emb|CAX56215.1| Succinyl-CoA synthetase beta chain [Erwinia pyrifoliae Ep1/96]
 gi|283479102|emb|CAY75018.1| succinyl-CoA synthetase beta chain [Erwinia pyrifoliae DSM 12163]
          Length = 388

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDAGGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLTADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|225848460|ref|YP_002728623.1| succinyl-CoA synthetase subunit beta [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644651|gb|ACN99701.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 388

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 189/394 (47%), Positives = 257/394 (65%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK + RKY +PV +G     V  A  A + L     VVK+QIHAGGRGK    
Sbjct: 1   MKVHEHQAKEIFRKYGLPVPRGYPAFDVKEAVEAAEELGTWPVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V     E+LG  L+T QTGP G  V+ +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKLAKSIEEVQQIAAELLGKKLVTFQTGPEGLPVSRLYIEEGTAIDKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+      + S  GGM+IEEVA   P+ I    I+P IG+ S     L   L L 
Sbjct: 111 AITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITHTIEPFIGLRSYHARELALKLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +LF  LYK + + D S++EINPL++ K+G L +LD+KI FDDN L+RH +I 
Sbjct: 171 KNLLNKAANLFMTLYKIYIELDASMVEINPLVLTKDGNLVILDAKIDFDDNGLFRHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++    E+EAK+ NL+YI LDGNI CMVNGAGLAM+TMD IKL GG PANFLDVG
Sbjct: 231 EMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+  ++A AFKII SD +VK I INIFGGI+RCD L +GI++A KEV IN+P+++R+E
Sbjct: 291 GSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV++G +++ ESGL +ITA  + + A K V A
Sbjct: 351 GTNVELGKKMLQESGLPLITADTMWEGALKAVEA 384


>gi|82775996|ref|YP_402343.1| succinyl-CoA synthetase subunit beta [Shigella dysenteriae Sd197]
 gi|309786391|ref|ZP_07681017.1| succinyl-CoA synthetase beta chain [Shigella dysenteriae 1617]
 gi|123563189|sp|Q32IK3|SUCC_SHIDS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81240144|gb|ABB60854.1| succinyl-CoA synthetase, beta subunit [Shigella dysenteriae Sd197]
 gi|308925785|gb|EFP71266.1| succinyl-CoA synthetase beta chain [Shigella dysenteriae 1617]
          Length = 388

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    + VK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWGVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|298505174|gb|ADI83897.1| succinyl-CoA synthetase, beta subunit [Geobacter sulfurreducens
           KN400]
          Length = 385

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 191/392 (48%), Positives = 259/392 (66%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y +PV +G V  +    E A K + G   V+K+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSAYGIPVPRGRVALTSDQVERAAKEMGGRC-VIKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  LIT QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDYGKELFGRRLITPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     IAS +GG+DIEEVA+  P KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRSTSRYCLIASAEGGVDIEEVAQKSPDKIHVLTIDPYTGLRPFQARRIALALGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLYK   +KD SL+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GTLCEDCVELMLNLYKVVLEKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D+ VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILEDADVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+ V  G +L+ ESGLNV TA  L + A++IV
Sbjct: 350 GSKVAEGKQLLVESGLNVQTADSLGEGAERIV 381


>gi|167463747|ref|ZP_02328836.1| succinyl-CoA synthetase subunit beta [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 345

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 186/355 (52%), Positives = 241/355 (67%), Gaps = 10/355 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V +G V  S   A  A K L  P+ V+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRQYGVSVPQGKVAFSPEEAVEAAKALGTPVVVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   E+LG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKIAKNLDEVRTYAGELLGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRGTGRIVMMASEEGGTEIEEVAAKTPEKIFKEVVDPAIGLQPFQARKLAYAVHIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALY+H DI 
Sbjct: 171 DELVNKAVKFMMALYDAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYQHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A + +LSYIALDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIQASKFDLSYIALDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           GGA ++KV  AFKII SD  VKG+ INIFGGIMRCDV+ KG+++AVKE+ ++ PL
Sbjct: 291 GGATKEKVTEAFKIILSDEKVKGVFINIFGGIMRCDVIAKGVVAAVKELGLDRPL 345


>gi|242062364|ref|XP_002452471.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
 gi|241932302|gb|EES05447.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
          Length = 422

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 262/396 (66%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SV   + A+K + P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVQEVKDALKNMFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +  + +   S   ++LG  L+TKQTGP G  V+ VY+ +   +  E+
Sbjct: 88  FK---SGLQGGVHIVKA-EEAESIASKMLGQILVTKQTGPEGKIVSKVYLCEKLSLTNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ ID   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 LKAADRQSSIEQIKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419


>gi|255019808|ref|ZP_05291884.1| Succinyl-CoA ligase [ADP-forming] beta chain [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970737|gb|EET28223.1| Succinyl-CoA ligase [ADP-forming] beta chain [Acidithiobacillus
           caldus ATCC 51756]
          Length = 387

 Score =  365 bits (936), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 254/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +  V V +G+   S+  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKRLLAEAGVTVPRGIPAFSLKEAINQARELGGPRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  S+ +V    + +LG  L+T QTGP G  V  + +E+ + +LRE YL
Sbjct: 58  -------GGVRVVDSIAAVEQAAQALLGKPLVTAQTGPEGQHVAALLIEEPSVLLREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR S  + F+AS +GG++IEE+A++ PQ I  + IDP +G        L     L+
Sbjct: 111 ALVVDRASARMRFVASDRGGVEIEELAREQPQAIASITIDPRVGFLPYQGRQLGFAWGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A          + +     D  ++EINPL +   GRL  LD+KIS DDNALYRH +  
Sbjct: 171 PAAVQQLVRTMQAMARLAPQLDALMIEINPLALTAEGRLLALDAKISMDDNALYRHPESD 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D +++D REI A+Q  L+YI+L GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 ELFDSTQQDGREITARQFGLNYISLGGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  DKV  AFK+I SD  V+ IL+NIFGGI RCD+L +GIL A +EV I++P+V+RLE
Sbjct: 291 GGAAADKVTQAFKLILSDQRVRAILVNIFGGITRCDLLAQGILQAAREVGIHLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G  L+ ESGL +ITA  LDD
Sbjct: 351 GTNREEGLALLRESGLALITAEGLDD 376


>gi|191171938|ref|ZP_03033483.1| succinyl-CoA synthetase beta chain [Escherichia coli F11]
 gi|190907703|gb|EDV67297.1| succinyl-CoA synthetase beta chain [Escherichia coli F11]
 gi|324014859|gb|EGB84078.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           60-1]
          Length = 389

 Score =  365 bits (936), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 263/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIYALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRII 385


>gi|319795823|ref|YP_004157463.1| succinyL-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
 gi|315598286|gb|ADU39352.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
          Length = 390

 Score =  365 bits (936), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 189/384 (49%), Positives = 263/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G   +S   A  A   L G  +VVK+QIHA         
Sbjct: 1   MNIHEYQGKDVLRKYGVTTPRGFACASADEAADAATRLGGRAWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     ++LG TL T QTGP G  V  + VE+G +I +E+YL
Sbjct: 52  -GGRGKGGGVKLAWSVDEVRRHASQMLGMTLKTHQTGPEGRVVKRLLVEEGIEIDKEMYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR SG VA +AS++GGMDIEEVA   P KI K+LIDP  G+   +   +   + L 
Sbjct: 111 ALVVDRESGRVALMASSEGGMDIEEVAARTPGKIHKVLIDPATGLKGSEADIVARSIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++ +    L  NLY+AF   D SL EINPL++ ++GR+  LD+K +FD NAL+R  +I 
Sbjct: 171 GKSVMQARTLMQNLYQAFDASDASLAEINPLVVTRDGRVIALDAKFNFDSNALFRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E+EA + +LSYIALDG+IGC+VNGAGLAMATMD+IKLYGG+PANFLDVG
Sbjct: 231 AMRDFDEEDPAELEASRFDLSYIALDGDIGCLVNGAGLAMATMDVIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +++ IL+NIFGGIM+CDV+ +G+++A +EV++++PLV+R++
Sbjct: 291 GGATAEKVTQAFKLMLRNPNLRAILVNIFGGIMKCDVIARGVIAAAREVELSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G  ++A+SGL +ITA D+
Sbjct: 351 GTNESLGRTILAQSGLPIITADDM 374


>gi|66824365|ref|XP_645537.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
 gi|74857927|sp|Q55AI5|SUCB1_DICDI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|60473670|gb|EAL71611.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
          Length = 445

 Score =  365 bits (936), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 191/393 (48%), Positives = 264/393 (67%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQA+ +++ Y +    G V  +   AE   + +     VVK+Q+ AGGRGKG F 
Sbjct: 35  LNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAEVMNTQDLVVKAQVLAGGRGKGIF- 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++ SS + V     ++LG TL+TKQTG  G  V+ VYV +   + +E+Y 
Sbjct: 94  --TSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYF 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    +AS +GG+DIE VA+D P  IFK  ID +IGV  E    L + L   
Sbjct: 152 AILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINPL    +G +  +D+K++FDDNA +RH DI 
Sbjct: 212 KKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFRHPDIF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED RE++A + +L+YI LDGNIGC+VNGAGLAMA+MDIIKLYGG+PANFLDVG
Sbjct: 272 KLRDKSQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGGSPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD  VK IL+NIFGGIM+CDV+  GI++A+KE+ I  PLV+RL+
Sbjct: 332 GGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDVIALGIIAALKELSIATPLVVRLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+   +++ +SGL +I A +LDDAAQK V 
Sbjct: 392 GTNVEAAKKIMEDSGLRLIAADNLDDAAQKSVR 424


>gi|77416577|sp|Q7UKI3|SUCC_RHOBA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|327539987|gb|EGF26584.1| succinyl-CoA synthetase (beta subunit) [Rhodopirellula baltica
           WH47]
          Length = 394

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 194/395 (49%), Positives = 266/395 (67%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L R   VPV  G ++++   A +A   L G + VVK+QIHAGGRGKG   
Sbjct: 1   MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P D KG V V+S+ ++  +    +LG  L+T QTGP G  V+ V+VE G DI RELYL
Sbjct: 61  DNP-DQKGVVLVKSAEEAKAA-AEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       + ST+GG++IE VA++ P+ IFK   DP +G+    V  LC  L ++
Sbjct: 119 GIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIE 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A          + + F D D  + EINPL+I  +G +  LD+KI FD+NA++RH D++
Sbjct: 179 GAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITGDGEMVALDAKIIFDENAMFRHKDLE 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEE+  E+ AK+  LSY+ LDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 239 ELRDLSEEEESELRAKKAGLSYVKLDGNIACLVNGAGLAMSTMDIIKYHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  +V  AF+I+ SD + KG+L+NIFGGI RC  +   +++A KEV  N+PLV+RLE
Sbjct: 299 GGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCTTIAGALITASKEVGFNVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  V+ G +++AES +++I A+DL DAA+KIV A 
Sbjct: 359 GTEVEEGRKMLAESDVDIINAMDLTDAAKKIVAAT 393


>gi|32476524|ref|NP_869518.1| succinyl-CoA synthetase (beta subunit) [Rhodopirellula baltica SH
           1]
 gi|32447070|emb|CAD76879.1| succinyl-CoA synthetase (beta subunit) [Rhodopirellula baltica SH
           1]
          Length = 413

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 194/395 (49%), Positives = 266/395 (67%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L R   VPV  G ++++   A +A   L G + VVK+QIHAGGRGKG   
Sbjct: 20  MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P D KG V V+S+ ++  +    +LG  L+T QTGP G  V+ V+VE G DI RELYL
Sbjct: 80  DNP-DQKGVVLVKSAEEAKAA-AEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYL 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       + ST+GG++IE VA++ P+ IFK   DP +G+    V  LC  L ++
Sbjct: 138 GIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIE 197

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A          + + F D D  + EINPL+I  +G +  LD+KI FD+NA++RH D++
Sbjct: 198 GAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITGDGEMVALDAKIIFDENAMFRHKDLE 257

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEE+  E+ AK+  LSY+ LDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 258 ELRDLSEEEESELRAKKAGLSYVKLDGNIACLVNGAGLAMSTMDIIKYHGGEPANFLDVG 317

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  +V  AF+I+ SD + KG+L+NIFGGI RC  +   +++A KEV  N+PLV+RLE
Sbjct: 318 GGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCTTIAGALITASKEVGFNVPLVVRLE 377

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  V+ G +++AES +++I A+DL DAA+KIV A 
Sbjct: 378 GTEVEEGRKMLAESDVDIINAMDLTDAAKKIVAAT 412


>gi|328675717|gb|AEB28392.1| Succinyl-CoA ligase [ADP-forming] beta chain [Francisella cf.
           novicida 3523]
          Length = 387

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|227114765|ref|ZP_03828421.1| succinyl-CoA synthetase subunit beta [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 388

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L  AAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAVEG 387


>gi|170769040|ref|ZP_02903493.1| succinate-CoA ligase, beta subunit [Escherichia albertii TW07627]
 gi|170122112|gb|EDS91043.1| succinate-CoA ligase, beta subunit [Escherichia albertii TW07627]
          Length = 388

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L     +PV  G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASSGLPVPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT  +G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDASGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|319956115|ref|YP_004167378.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitratifractor
           salsuginis DSM 16511]
 gi|319418519|gb|ADV45629.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitratifractor
           salsuginis DSM 16511]
          Length = 390

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 203/398 (51%), Positives = 258/398 (64%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + RKYNVPV +G V  +V  A  A K L G L+VVK+QIHA         
Sbjct: 1   MNIHEYQAKEIFRKYNVPVPRGKVAFTVDEAVEAAKELGGNLWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG TL+T QTGP G  V+ VY+E+GADI +E YL
Sbjct: 52  -GGRGLGGGVKLAKSIDEVRHWADEILGMTLVTHQTGPEGKVVHKVYIEEGADIAKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR + M   +AST+GGM+IE+VA + P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMLLDRAAEMPVMMASTEGGMEIEKVAAETPEKIVKVTIDPTIGFQGFHGRKLAFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY A+ D D  ++EINPLI   +G+   LD+K+ FDDNALYRH DI 
Sbjct: 171 KEEIGTFIKFASALYNAYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYRHPDIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EE+  E+EAK H LSYI LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLEEEEPTELEAKAHGLSYIKLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K   +N+P+V+RL+
Sbjct: 291 GGANPETVAKGFEIILKDPNVKAIFVNIFGGIVRCDRVANGILEATKITDVNVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N D    ++  + + N+I A +L D A+K V A KG
Sbjct: 351 GTNADEAAEILKNANIENIIAAENLADGARKAVAAAKG 388


>gi|167626463|ref|YP_001676963.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|241668896|ref|ZP_04756474.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877428|ref|ZP_05250138.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|189030242|sp|B0TZ23|SUCC_FRAP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167596464|gb|ABZ86462.1| Succinate--CoA ligase (ADP-forming) [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|254843449|gb|EET21863.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 387

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLTLIPADGLADAADKVVKSL 386


>gi|153213728|ref|ZP_01948980.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 1587]
 gi|124115789|gb|EAY34609.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 1587]
          Length = 388

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 QMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V AV+G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAVEG 387


>gi|93004945|ref|YP_579382.1| succinyl-CoA synthetase subunit beta [Psychrobacter cryohalolentis
           K5]
 gi|122416126|sp|Q1QEK5|SUCC_PSYCK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|92392623|gb|ABE73898.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychrobacter
           cryohalolentis K5]
          Length = 388

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 199/397 (50%), Positives = 274/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+ Y +P+ +G++  S   A +A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLKSYGLPIQEGIIAYSGDEAAAAFDKTPTDIAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +       E++G  L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLVKTREEAKQVTDELIGKNLVTYQTDAAGQPVNFVLVAEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KIFK+ IDPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIFKVNIDPLVGLLPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    Y+AF + D+ LLEINPL + +NG +  +D KI  D NALYR   I
Sbjct: 171 EGKQINQFVKLMSGAYQAFVENDIDLLEINPLAVRENGEIVCVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALQDKSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII  DSSV+G+LINIFGGI+RCD++ + I++A+KEV + +P+V+RL
Sbjct: 291 GGGATKDRVVEAFKIILEDSSVEGVLINIFGGIVRCDMIAEAIIAAIKEVDVKVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +++ ESGL +I+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAQILEESGLKLISAQGLSDAAQKIVDAVK 387


>gi|68249742|ref|YP_248854.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae
           86-028NP]
 gi|81335829|sp|Q4QLA3|SUCC_HAEI8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|68057941|gb|AAX88194.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae
           86-028NP]
          Length = 389

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++    + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSLHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SL+E+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTKQGYLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+S +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAQSDVNILTAQSLQQAAELAVNAAKG 387


>gi|157146665|ref|YP_001453983.1| succinyl-CoA synthetase subunit beta [Citrobacter koseri ATCC
           BAA-895]
 gi|157083870|gb|ABV13548.1| hypothetical protein CKO_02431 [Citrobacter koseri ATCC BAA-895]
          Length = 388

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|240949389|ref|ZP_04753730.1| succinyl-CoA synthetase beta chain [Actinobacillus minor NM305]
 gi|240296138|gb|EER46794.1| succinyl-CoA synthetase beta chain [Actinobacillus minor NM305]
          Length = 389

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 186/396 (46%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y++PV++G+   S     +A+K L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYHLPVSQGIACQSADETVNALKRLNGEVWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +     LG+ L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVHNEQEARAFADYWLGNRLVTFQTDSRGQPVNTIYIEETCQIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA+  P+ I K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRSSQKVIFMASSAGGMNIEEVAEKTPELIHKVALDPLVGGQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F +KD++LLE+NPL++ + G+L  LD+K+  D NALYRH ++Q
Sbjct: 171 NDEVKQFSHIFVQLSKLFIEKDLALLEVNPLVVTQQGQLICLDAKMVIDSNALYRHPELQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDPREAEAAKWQLNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKLILSDHNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVQVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A+SGL+++ A  L +AA   V A +
Sbjct: 351 GTNAELGREILAKSGLSLLVANTLKEAAVLAVKAAQ 386


>gi|146310886|ref|YP_001175960.1| succinyl-CoA synthetase subunit beta [Enterobacter sp. 638]
 gi|189030240|sp|A4W879|SUCC_ENT38 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145317762|gb|ABP59909.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Enterobacter
           sp. 638]
          Length = 388

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 197/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACNTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLAKIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQSDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|28199797|ref|NP_780111.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa Temecula1]
 gi|71898261|ref|ZP_00680435.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|182682549|ref|YP_001830709.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa M23]
 gi|32130083|sp|Q87A98|SUCC_XYLFT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735000|sp|B2I9R4|SUCC_XYLF2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|28057918|gb|AAO29760.1| succinyl-CoA synthetase, beta subunit [Xylella fastidiosa
           Temecula1]
 gi|71732000|gb|EAO34057.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|182632659|gb|ACB93435.1| succinyl-CoA synthetase, beta subunit [Xylella fastidiosa M23]
 gi|307578828|gb|ADN62797.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 387

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L  +Y +PV  G + SS   A +A K+L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V      +LG+ + T Q+      VN V V +  +I +ELYL
Sbjct: 58  -------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG+DIE VA + P+KI  L +D + G+       +   L L+
Sbjct: 111 SVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LY+ F DKD+SL+E+NPL I+ NG L  LD KI+ DDNA +RH ++ 
Sbjct: 171 AKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHKELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A +++L+Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S + VK I +NIFGGI+RCD++ +GI++AVKEV + +P+++RLE
Sbjct: 291 GGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G +L+A SGL +I A D++D A+K V AV
Sbjct: 351 GTNVDAGKQLLATSGLAIIPADDINDGAKKAVAAV 385


>gi|310821309|ref|YP_003953667.1| succinyl-CoA ligase [ADP-forming] subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394381|gb|ADO71840.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Stigmatella
           aurantiaca DW4/3-1]
          Length = 386

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 198/399 (49%), Positives = 274/399 (68%), Gaps = 16/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG--- 57
           M IHEYQ K L RKY VP  +G++  S + AE+A K L  P+ VVKSQIHAGGRGKG   
Sbjct: 1   MKIHEYQGKELFRKYGVPTPRGILALSPNEAEAAAKELATPVVVVKSQIHAGGRGKGGGV 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +  + PA++K                + +LG  L T QTGP G  V+ VY+E+G  I +E
Sbjct: 61  KLAKSPAEAK-------------ELAQAMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQE 107

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL + +DR +  + F+AS +GG++IEEVA  +P+KI +  +DP +G        L   L
Sbjct: 108 LYLGVTLDRATSRITFMASREGGVEIEEVAAQHPEKILREAVDPAVGFLDFQGRKLAFGL 167

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L G            LYK + + D +L+EINPL+I+K+G +  LD+K++FD+NAL++H 
Sbjct: 168 GLSGPTVNKFVQFCSALYKMYTETDAALVEINPLVILKDGGVVALDAKVTFDENALFKHK 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++   RD++EE+ RE +AK+ +L+YIALDGNIGCMVNGAGLAMATMD IKL GG PANFL
Sbjct: 228 ELLNYRDLAEEEPRETQAKEFDLAYIALDGNIGCMVNGAGLAMATMDTIKLVGGNPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA ++KV AAFK+I +D +VK +L+NIFGGIM+CDV+ +GI++A KEV++ +PLV+
Sbjct: 288 DVGGGASKEKVTAAFKLILADPAVKAVLVNIFGGIMKCDVIAEGIIAAAKEVQLKVPLVV 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RLEG NV+ G +L++ SGL +  A +L  AA+K V A+K
Sbjct: 348 RLEGTNVEKGKQLLSNSGLAITPADNLRQAAEKAVAAIK 386


>gi|218551370|ref|YP_002385162.1| succinyl-CoA synthetase subunit beta [Escherichia fergusonii ATCC
           35469]
 gi|218358912|emb|CAQ91573.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia
           fergusonii ATCC 35469]
 gi|324112302|gb|EGC06280.1| succinate-CoA ligase [Escherichia fergusonii B253]
 gi|325499639|gb|EGC97498.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia
           fergusonii ECD227]
          Length = 389

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 262/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQALRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E  I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEASITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAVEGQRLLAESGLTVEAVDSLDDAAKRII 385


>gi|281181129|dbj|BAI57459.1| succinyl-CoA synthetase beta subunit [Escherichia coli SE15]
          Length = 389

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 262/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E  I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEASITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRII 385


>gi|170769563|ref|ZP_02904016.1| succinyl-CoA synthetase beta chain [Escherichia albertii TW07627]
 gi|170121620|gb|EDS90551.1| succinyl-CoA synthetase beta chain [Escherichia albertii TW07627]
          Length = 389

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 260/395 (65%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAKALL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKALLAGMGMPCPKEIAIQQISQLTEAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    +  + +LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFAQHMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQALRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E  I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEASITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLAVEAVDSLDDAAKRII 385


>gi|15839136|ref|NP_299824.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa 9a5c]
 gi|21264058|sp|Q9PAH1|SUCC_XYLFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|9107756|gb|AAF85344.1|AE004061_9 succinyl-CoA synthetase, beta subunit [Xylella fastidiosa 9a5c]
          Length = 387

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 187/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L  +Y +PV  G + SS   A +A K+L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V      +LG+ + T Q+      VN V V +  +I +ELYL
Sbjct: 58  -------GGVKFCKTTDEVKQAAAAMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG+DIE VA + P+KI  L +D + G+       +   L L+
Sbjct: 111 SVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LY+ F DKD+SL+E+NPL I+ NG L  LD KI+ DDNA +RH ++ 
Sbjct: 171 AKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHKELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A +++L+Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S + VK I +NIFGGI+RCD++ +GI++AVKEV + +P+++RLE
Sbjct: 291 GGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G +L+A SGL +I A D++D A+K V AV
Sbjct: 351 GTNVDAGKQLLATSGLAIIPADDINDGAKKAVAAV 385


>gi|292487655|ref|YP_003530528.1| succinyl-CoA synthetase subunit beta [Erwinia amylovora CFBP1430]
 gi|292898892|ref|YP_003538261.1| succinyl-CoA synthetase subunit beta [Erwinia amylovora ATCC 49946]
 gi|291198740|emb|CBJ45849.1| succinyl-CoA synthetase beta chain [Erwinia amylovora ATCC 49946]
 gi|291553075|emb|CBA20120.1| succinyl-CoA synthetase beta chain [Erwinia amylovora CFBP1430]
 gi|312171763|emb|CBX80021.1| succinyl-CoA synthetase beta chain [Erwinia amylovora ATCC
           BAA-2158]
          Length = 388

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRTFAENWLGKRLVTYQTDAGGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVVTKQGDLVCLDGKLTADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|253687632|ref|YP_003016822.1| succinyl-CoA synthetase, beta subunit [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|259511787|sp|C6DCD6|SUCC_PECCP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|251754210|gb|ACT12286.1| succinyl-CoA synthetase, beta subunit [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 388

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L  AAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAVEG 387


>gi|262170925|ref|ZP_06038603.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus
           MB-451]
 gi|261892001|gb|EEY37987.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus
           MB-451]
          Length = 388

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G+L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGKLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|310767024|gb|ADP11974.1| succinyl-CoA synthetase subunit beta [Erwinia sp. Ejp617]
          Length = 388

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDAGGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLTADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|156934780|ref|YP_001438696.1| succinyl-CoA synthetase subunit beta [Cronobacter sakazakii ATCC
           BAA-894]
 gi|189029908|sp|A7MQX5|SUCC_ENTS8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|156533034|gb|ABU77860.1| hypothetical protein ESA_02620 [Cronobacter sakazakii ATCC BAA-894]
          Length = 388

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 261/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARSGLPTPVGYACSTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKVFMGLANIFLERDLALIEINPLVITSQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|260597126|ref|YP_003209697.1| succinyl-CoA synthetase subunit beta [Cronobacter turicensis z3032]
 gi|260216303|emb|CBA29275.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Cronobacter
           turicensis z3032]
          Length = 388

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 261/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARSGLPTPVGYACSTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKVFMGLATIFLERDLALIEINPLVITSQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|56707643|ref|YP_169539.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670114|ref|YP_666671.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456713|ref|ZP_03665186.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370158|ref|ZP_04986164.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874460|ref|ZP_05247170.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81597819|sp|Q5NHF3|SUCC_FRATT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123359573|sp|Q14IV5|SUCC_FRAT1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56604135|emb|CAG45137.1| Succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320447|emb|CAL08520.1| Succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568402|gb|EDN34056.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840459|gb|EET18895.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158801|gb|ADA78192.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 387

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK ILINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAILINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|82702208|ref|YP_411774.1| succinyl-CoA synthetase subunit beta [Nitrosospira multiformis ATCC
           25196]
 gi|82410273|gb|ABB74382.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosospira
           multiformis ATCC 25196]
          Length = 396

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 182/397 (45%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L +Y V +A+G +  ++  +    + + G ++VVK+QIH+GGRGK    
Sbjct: 1   MDIHEYQAKEILMRYGVKIAEGGLAYTIEESVQRAREIDGNVWVVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  +   V +   E+LG  L+T+QTG  G     VYVE G  I RE+YL
Sbjct: 58  -------GGIKVCRTHDEVRAASEELLGKILVTRQTGAVGKVCTRVYVEAGTHIAREMYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR+S  +  I S QGGM+IEE+A   PQ I K+ I+P +G+       +   L ++
Sbjct: 111 CFLIDRSSERIVMIGSGQGGMEIEELAHTNPQAIKKIFIEPAVGLQDFQAREMAFALGVE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+A  D D +++EINPL+I  +G L  LD+K+SFD+NAL+R  ++ 
Sbjct: 171 AAQLPHAVKTIRGCYRALRDLDANMVEINPLVITGSGELLALDAKMSFDENALFRRHEVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ D RE+ A  H LSYI L+G+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDKTQADPREVAASDHGLSYIGLNGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D  VK +L+NIF GI RCD + +G++ AV+ + + IPLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADKGVKAMLVNIFAGINRCDWIAQGVVQAVRNIDMKIPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G R+IAESGL +ITA  L +AA+K+V A  G
Sbjct: 351 GTNVEEGQRIIAESGLPIITAGTLAEAAEKVVQARNG 387


>gi|219870877|ref|YP_002475252.1| succinyl-CoA synthetase subunit beta [Haemophilus parasuis SH0165]
 gi|254778440|sp|B8F4Q2|SUCC_HAEPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219691081|gb|ACL32304.1| succinyl-CoA synthetase subunit beta [Haemophilus parasuis SH0165]
          Length = 388

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +  KY +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQIFAKYKLPVSQGIACKTADEAVEAIKQLKGDAWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +YVE+ A I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYVEETAGIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA   P+ + K+ IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRSSQKVVFMASSAGGMNIEEVAAKTPELLHKVAIDPLVGGMAYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD+SLLEINPL++   G L  LD+K+  D NALYR  ++ 
Sbjct: 171 GDQIKQFSFIFTQLAKLFVEKDLSLLEINPLVVTTEGNLLCLDAKMVVDGNALYRQPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREALAESHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++  GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDKAVKAVLVNIFGGIVRCDLIADGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAELGREILAKSGLNIIAAATLTDAAVEAVKAAGG 387


>gi|284035901|ref|YP_003385831.1| succinyl-CoA synthetase subunit beta [Spirosoma linguale DSM 74]
 gi|283815194|gb|ADB37032.1| succinyl-CoA synthetase, beta subunit [Spirosoma linguale DSM 74]
          Length = 405

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 191/408 (46%), Positives = 269/408 (65%), Gaps = 13/408 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+KY V + +G+V  S   A  A K L         VVKSQIHAGGRGK
Sbjct: 1   MNIHEYQGKEILKKYGVRIQEGIVAESPEKAVEAAKLLIAQSGQKFVVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G   ++    + GV +  S+ +V    + ++G+ L+T QTGP G RVN V + +     G
Sbjct: 61  G---QIVGSEQRGVALAKSVDAVRDITKNLIGNILVTHQTGPEGKRVNKVLIAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E+Y+ +L+DRT      +AST+GGMDIEEVA+  P+KI K  IDP +G+      
Sbjct: 118 PSEPKEMYIGILLDRTKACNVIMASTEGGMDIEEVAEHSPEKIVKEWIDPAVGLQPFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G+A  +       LYKA+ D D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 178 KVAFGLGLEGEAFKEMVKFVTALYKAYVDTDASMFEINPVLKTSDNKILAVDAKVNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRHLD++ +RD++EED  E+EA  ++L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 238 ALYRHLDLKAMRDLAEEDPLEVEASANDLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F+II  D +VK ILINIFGGI+RCD +  G++ A K +  
Sbjct: 298 EPANFLDVGGGANAKTVEAGFRIILKDPNVKAILINIFGGIVRCDRVATGVVEAYKAIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           I +P+++RL+G N + G ++I ESGL V +A+ L +AA+K+   V+ +
Sbjct: 358 IPVPIIVRLQGTNAEEGAKIIDESGLKVQSAVLLKEAAEKVRQVVEAL 405


>gi|270263774|ref|ZP_06192043.1| succinyl-CoA synthetase subunit beta [Serratia odorifera 4Rx13]
 gi|270042658|gb|EFA15753.1| succinyl-CoA synthetase subunit beta [Serratia odorifera 4Rx13]
          Length = 388

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K+ IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVGQFAKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDERESRAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|215489395|ref|YP_002331826.1| predicted succinyl-CoA synthetase, beta subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312965653|ref|ZP_07779882.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
 gi|215267467|emb|CAS11921.1| predicted succinyl-CoA synthetase, beta subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312289627|gb|EFR17518.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
          Length = 389

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 187/395 (47%), Positives = 262/395 (66%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + E+   + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SD  VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDGKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N   G RL+AESGL V     LDDAA++I+
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRII 385


>gi|16759677|ref|NP_455294.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764108|ref|NP_459723.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142550|ref|NP_805892.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414145|ref|YP_151220.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179312|ref|YP_215729.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161615036|ref|YP_001589000.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552843|ref|ZP_02346594.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167993015|ref|ZP_02574110.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230617|ref|ZP_02655675.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168238882|ref|ZP_02663940.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168240590|ref|ZP_02665522.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264342|ref|ZP_02686315.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467705|ref|ZP_02701542.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820133|ref|ZP_02832133.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194445717|ref|YP_002039975.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448880|ref|YP_002044768.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472361|ref|ZP_03078345.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736247|ref|YP_002113844.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197249811|ref|YP_002145696.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197261736|ref|ZP_03161810.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197363067|ref|YP_002142704.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200389638|ref|ZP_03216249.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204929880|ref|ZP_03220901.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205352002|ref|YP_002225803.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856182|ref|YP_002242833.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213027470|ref|ZP_03341917.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213051755|ref|ZP_03344633.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425386|ref|ZP_03358136.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213649149|ref|ZP_03379202.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213851940|ref|ZP_03381472.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224582553|ref|YP_002636351.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911668|ref|ZP_04655505.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289824375|ref|ZP_06543968.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|54039644|sp|P66870|SUCC_SALTI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54042232|sp|P66869|SUCC_SALTY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|75484387|sp|Q57RL3|SUCC_SALCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417483|sp|Q5PCM7|SUCC_SALPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081795|sp|A9MTQ2|SUCC_SALPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734981|sp|B5EZG1|SUCC_SALA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734983|sp|B5QWG8|SUCC_SALEP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734984|sp|B5R689|SUCC_SALG2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734985|sp|B4TBD7|SUCC_SALHS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734986|sp|B4SZE2|SUCC_SALNS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734987|sp|B5BC72|SUCC_SALPK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734988|sp|B4TQ53|SUCC_SALSV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778450|sp|C0PWE7|SUCC_SALPC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|25293469|pir||AF0591 succinyl-CoA synthetase beta chain [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16419248|gb|AAL19682.1| succinyl-CoA synthetase, beta subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501970|emb|CAD05200.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138181|gb|AAO69752.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128402|gb|AAV77908.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62126945|gb|AAX64648.1| succinyl-CoA synthetase, beta subunit [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364400|gb|ABX68168.1| hypothetical protein SPAB_02796 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404380|gb|ACF64602.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407184|gb|ACF67403.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458725|gb|EDX47564.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711749|gb|ACF90970.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195629215|gb|EDX48583.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094544|emb|CAR60064.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197213514|gb|ACH50911.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197239991|gb|EDY22611.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197288325|gb|EDY27706.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199602083|gb|EDZ00629.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320874|gb|EDZ06075.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205271783|emb|CAR36617.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205322561|gb|EDZ10400.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328889|gb|EDZ15653.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334709|gb|EDZ21473.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205339991|gb|EDZ26755.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343101|gb|EDZ29865.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347162|gb|EDZ33793.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707985|emb|CAR32274.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467080|gb|ACN44910.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246001|emb|CBG23803.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992476|gb|ACY87361.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312911764|dbj|BAJ35738.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085007|emb|CBY94796.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226313|gb|EFX51364.1| Succinyl-CoA ligase [ADP-forming] beta chain [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322615829|gb|EFY12747.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621225|gb|EFY18082.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623645|gb|EFY20483.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628917|gb|EFY25697.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634897|gb|EFY31627.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636575|gb|EFY33279.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641759|gb|EFY38393.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647816|gb|EFY44296.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651854|gb|EFY48223.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652649|gb|EFY48998.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658457|gb|EFY54720.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664941|gb|EFY61132.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668390|gb|EFY64546.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670522|gb|EFY66655.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675262|gb|EFY71338.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679688|gb|EFY75729.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684836|gb|EFY80835.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322713781|gb|EFZ05352.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323193154|gb|EFZ78373.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200605|gb|EFZ85680.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202277|gb|EFZ87325.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205456|gb|EFZ90422.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213505|gb|EFZ98298.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215339|gb|EGA00084.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221786|gb|EGA06193.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323228084|gb|EGA12220.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231010|gb|EGA15126.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234157|gb|EGA18246.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238148|gb|EGA22206.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243583|gb|EGA27601.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247393|gb|EGA31352.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251381|gb|EGA35253.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258480|gb|EGA42152.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260634|gb|EGA44243.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264706|gb|EGA48208.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270970|gb|EGA54405.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326627042|gb|EGE33385.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332987675|gb|AEF06658.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 388

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|258626223|ref|ZP_05721071.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM603]
 gi|258581578|gb|EEW06479.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM603]
          Length = 388

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKNGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|74316823|ref|YP_314563.1| succinyl-CoA synthetase subunit beta [Thiobacillus denitrificans
           ATCC 25259]
 gi|123612162|sp|Q3SKM1|SUCC_THIDA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|74056318|gb|AAZ96758.1| succinyl-CoA synthase, beta subunit [Thiobacillus denitrificans
           ATCC 25259]
          Length = 386

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 202/393 (51%), Positives = 262/393 (66%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +LR  N+   +G+  +S  AA  A + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKQVLRSSNLNTPRGIAATSADAAADAARELGGEAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S+ +V S    +LG  L+T Q  P G  V+ V VE+   I RELYL
Sbjct: 58  -------GGVKVVTSIDAVRSVAAALLGKPLVTVQNAPDGQPVHTVLVEETLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  VA +AS  GGMDIE+VA   P+K+   + DPL+GV      +L   L L 
Sbjct: 111 SLLVDRASERVAVVASAAGGMDIEQVAHATPEKVLTEICDPLLGVQDFQCRALAFALGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   L P LY+ F   D+SLLEINPL++  + R+  LD K+S DDNALYR   + 
Sbjct: 171 GDAYKDFCRLLPQLYRVFVANDLSLLEINPLVVTTDNRVLPLDCKMSVDDNALYRRKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ D++E  A   N++Y+AL GNIGCMVNGAGLAMATMD+I+L GGAPANFLDVG
Sbjct: 231 DLRDDSQIDAKEAAANAANVNYVALAGNIGCMVNGAGLAMATMDLIQLEGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA  FKII  D +VK +LINIFGGI+RCDV+ +GI+ AV+EV + +P+++RLE
Sbjct: 291 GGATPETVAQGFKIILLDPNVKAVLINIFGGIVRCDVIAEGIIQAVREVGVEVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N ++G  L+AESGL ++ A  L  AA+  V 
Sbjct: 351 GTNAELGRTLLAESGLAIVAAESLTQAAKFAVE 383


>gi|271499753|ref|YP_003332778.1| succinyl-CoA synthetase subunit beta [Dickeya dadantii Ech586]
 gi|270343308|gb|ACZ76073.1| succinyl-CoA synthetase, beta subunit [Dickeya dadantii Ech586]
          Length = 388

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDHSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|221134283|ref|ZP_03560588.1| succinyl-CoA synthetase subunit beta [Glaciecola sp. HTCC2999]
          Length = 388

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L R+Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFREYGLPVSEGFAAGTAQEAVEAADRIGGDEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++      + +     LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKQKDEIAAFAENWLGKNLVTYQTDEAGQPVTKILVESCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 GAVVDRATRSIVFMASTEGGVEIETVAEETPEKILKAAIDPLVGAQPYQAREIAFALGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+EINPL+I  +G L  LD+K++ D NA+YR   +Q
Sbjct: 171 GVQIRQFTTIFMGLAKMFEELDVALIEINPLVIKADGDLHCLDAKVAIDGNAMYRQPKLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAAWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNALLGREVLANSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|307130099|ref|YP_003882115.1| succinyl-CoA synthetase, subunit beta [Dickeya dadantii 3937]
 gi|306527628|gb|ADM97558.1| succinyl-CoA synthetase, beta subunit [Dickeya dadantii 3937]
          Length = 388

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLANLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDHSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|161504112|ref|YP_001571224.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189081794|sp|A9MJL9|SUCC_SALAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|160865459|gb|ABX22082.1| hypothetical protein SARI_02210 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 388

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|39996160|ref|NP_952111.1| succinyl-CoA synthetase subunit beta [Geobacter sulfurreducens PCA]
 gi|81702853|sp|Q74EA5|SUCC_GEOSL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|39982925|gb|AAR34384.1| succinyl-CoA synthase, beta subunit [Geobacter sulfurreducens PCA]
          Length = 385

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 190/392 (48%), Positives = 258/392 (65%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y +PV +G V  +    E A K + G   V+K+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSAYGIPVPRGRVALTSDQVERAAKEMGGRC-VIKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  LIT QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDYGKELFGRRLITPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     IAS +GG+DIEEV +  P KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRSTSRYCLIASAEGGVDIEEVVQKSPDKIHVLTIDPYTGLRPFQARRIALALGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLYK   +KD SL+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GTLCEDCVELMLNLYKVVLEKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D+ VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILEDADVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+ V  G +L+ ESGLNV TA  L + A++IV
Sbjct: 350 GSKVAEGKQLLVESGLNVQTADSLGEGAERIV 381


>gi|198242608|ref|YP_002214706.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|226734982|sp|B5FNF9|SUCC_SALDC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|197937124|gb|ACH74457.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326622462|gb|EGE28807.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 388

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|300309992|ref|YP_003774084.1| succinyl-CoA synthetase, beta chain protein [Herbaspirillum
           seropedicae SmR1]
 gi|124483474|emb|CAM32610.1| Succinyl-CoA synthetase protein, beta chain protein [Herbaspirillum
           seropedicae]
 gi|300072777|gb|ADJ62176.1| succinyl-CoA synthetase, beta chain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 386

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/386 (48%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ V V +G+   SV   E+A K L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVTVPRGIPCMSVDEVEAAAKELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +I+G  L+T QTGP G +V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVKEYANQIMGMQLVTHQTGPEGQKVRRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR S  V  +AS++GGMDIEEVA   P+KI  ++IDP+ G+T      +   + + 
Sbjct: 111 SLVTDRVSQKVVLMASSEGGMDIEEVAHSNPEKIHNVIIDPVDGLTDAQADDVAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKA+ + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPAARKNLQGLYKAYWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  +K IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPELKAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +L+A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKLLADSGLPIISADSMEE 376


>gi|283784483|ref|YP_003364348.1| succinyl-CoA synthetase beta chain [Citrobacter rodentium ICC168]
 gi|282947937|emb|CBG87501.1| succinyl-CoA synthetase beta chain [Citrobacter rodentium ICC168]
          Length = 388

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|118497193|ref|YP_898243.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           novicida U112]
 gi|194323492|ref|ZP_03057269.1| succinyl-CoA synthetase, beta subunit family [Francisella
           tularensis subsp. novicida FTE]
 gi|208778985|ref|ZP_03246331.1| succinyl-CoA synthetase, beta subunit family [Francisella novicida
           FTG]
 gi|254372558|ref|ZP_04988047.1| succinyl-CoA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374017|ref|ZP_04989499.1| succinyl-CoA synthetase [Francisella novicida GA99-3548]
 gi|189030205|sp|A0Q5H4|SUCC_FRATN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118423099|gb|ABK89489.1| succinyl-CoA synthetase, beta chain [Francisella novicida U112]
 gi|151570285|gb|EDN35939.1| succinyl-CoA synthetase [Francisella novicida GA99-3549]
 gi|151571737|gb|EDN37391.1| succinyl-CoA synthetase [Francisella novicida GA99-3548]
 gi|194322347|gb|EDX19828.1| succinyl-CoA synthetase, beta subunit family [Francisella
           tularensis subsp. novicida FTE]
 gi|208744785|gb|EDZ91083.1| succinyl-CoA synthetase, beta subunit family [Francisella novicida
           FTG]
 gi|328676665|gb|AEB27535.1| Succinyl-CoA ligase [ADP-forming] beta chain [Francisella cf.
           novicida Fx1]
          Length = 387

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|296103343|ref|YP_003613489.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057802|gb|ADF62540.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 388

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|258621148|ref|ZP_05716182.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM573]
 gi|262166195|ref|ZP_06033932.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus VM223]
 gi|262404435|ref|ZP_06080990.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC586]
 gi|258586536|gb|EEW11251.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM573]
 gi|262025911|gb|EEY44579.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus VM223]
 gi|262349467|gb|EEY98605.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC586]
          Length = 388

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|53803924|ref|YP_114179.1| succinyl-CoA synthase subunit beta [Methylococcus capsulatus str.
           Bath]
 gi|53757685|gb|AAU91976.1| succinyl-CoA synthase, beta subunit [Methylococcus capsulatus str.
           Bath]
          Length = 389

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 190/386 (49%), Positives = 255/386 (66%), Gaps = 12/386 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y VPV  G V  S   A S  + + G  +VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKELLKTYGVPVPDGAVAYSDAQAASVAEEIGGSRWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V      +LGS L+T QTGP GS V  ++VE  + I +E YL
Sbjct: 58  -------GGVKVAHSIEEVRQYADAMLGSHLVTHQTGPGGSLVQRLWVEQASHIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  IAS++GGM+IEEVAK+ P+KI K ++DP IG+       +   + L+
Sbjct: 111 GFVIDRGNQRITLIASSEGGMEIEEVAKETPEKIVKEVVDPAIGLLDFQCRKVATAIGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM--KNGRLRVLDSKISFDDNALYRHLD 238
           G+       L   +Y+   DKD    EINPL I+   +  L VLD+K +FDDNALYR   
Sbjct: 171 GKLMPQAVRLMKAIYRCMRDKDALQAEINPLAIVGESDESLMVLDAKFNFDDNALYRQRT 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I E+RD++EED +E+EA  H L+YIALDGNIGC+VNGAGLAMA++D I L+GG PANFLD
Sbjct: 231 ITEMRDLAEEDPKEVEASGHGLNYIALDGNIGCIVNGAGLAMASLDAITLHGGRPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  +KV  A +I+  D +V+ IL+NIF GI RCD + KG++ A   ++I +PL++R
Sbjct: 291 VGGGASPEKVTNACRIVLEDPNVRCILVNIFAGINRCDWIAKGLIQACDSLQIKVPLIVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDL 384
           L G NVD G +++AESGL+ ITA +L
Sbjct: 351 LAGTNVDEGRKILAESGLSFITAENL 376


>gi|251790492|ref|YP_003005213.1| succinyl-CoA synthetase subunit beta [Dickeya zeae Ech1591]
 gi|247539113|gb|ACT07734.1| succinyl-CoA synthetase, beta subunit [Dickeya zeae Ech1591]
          Length = 388

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMRDHSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|281208774|gb|EFA82949.1| succinate-CoA ligase [Polysphondylium pallidum PN500]
          Length = 441

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/393 (47%), Positives = 264/393 (67%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQA+ ++R Y +    G V  +   AE   + L     VVK+QI AGGRGKG F 
Sbjct: 31  LNVHEYQAQKMMRTYGIECPNGNVADTPEEAEKLAEVLNTQDLVVKAQILAGGRGKGVFS 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV + +S + V +  +++LG TL+TKQTGP G  VN +Y+ +   + RE+Y 
Sbjct: 91  ---SGLKGGVHICNSPEEVKNYAKKMLGYTLVTKQTGPDGKVVNKIYIAERHYLRREMYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    IAS +GG+DIE VA++ P  IF   ID   GV  E  A L   + + 
Sbjct: 148 AILMDRKTGGPVMIASPEGGVDIETVARENPSAIFVEPIDIFKGVQPEQTARLAQKIGIS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINPL    +G +  +D+K++FDDNA +R  ++ 
Sbjct: 208 PKNISKAQDQMQKLYNFFIKHDCTLVEINPLAETSSGDVLCMDAKLNFDDNAAFRQKEVF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED RE++A +++L+YI LDG+IGC+VNGAGLAMATMDIIK YGG+PANFLDVG
Sbjct: 268 DLRDRTQEDPREVKASEYDLNYIGLDGSIGCLVNGAGLAMATMDIIKHYGGSPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD+ VK IL+NIFGGIM+CD++  GI++AVKE+ I  PLV+RL+
Sbjct: 328 GGATQKQVTEAIKLISSDTKVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+   +++ +SGL +I A DLD+AA+K V 
Sbjct: 388 GTNVESAKKIMEDSGLRLIAADDLDEAAEKAVR 420


>gi|62260721|gb|AAX77927.1| unknown protein [synthetic construct]
          Length = 422

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 27  MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 84  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 137 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 197 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 257 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK ILINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 317 GGGATKERVIEAFKLILDDENVKAILINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 377 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 412


>gi|15642085|ref|NP_231717.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586911|ref|ZP_01676691.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 2740-80]
 gi|147673132|ref|YP_001217610.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae O395]
 gi|153801987|ref|ZP_01956573.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-3]
 gi|153818372|ref|ZP_01971039.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae NCTC 8457]
 gi|153821672|ref|ZP_01974339.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae B33]
 gi|153826084|ref|ZP_01978751.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-2]
 gi|153828883|ref|ZP_01981550.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 623-39]
 gi|227082211|ref|YP_002810762.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae M66-2]
 gi|229507826|ref|ZP_04397331.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae BX
           330286]
 gi|229511937|ref|ZP_04401416.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae B33]
 gi|229513740|ref|ZP_04403202.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TMA
           21]
 gi|229519073|ref|ZP_04408516.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC9]
 gi|229522042|ref|ZP_04411459.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TM
           11079-80]
 gi|229524091|ref|ZP_04413496.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae bv.
           albensis VL426]
 gi|229528899|ref|ZP_04418289.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           12129(1)]
 gi|229607371|ref|YP_002878019.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MJ-1236]
 gi|254226088|ref|ZP_04919686.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V51]
 gi|254286798|ref|ZP_04961751.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae AM-19226]
 gi|254849171|ref|ZP_05238521.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MO10]
 gi|255745172|ref|ZP_05419121.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholera CIRS
           101]
 gi|262155970|ref|ZP_06029091.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae INDRE
           91/1]
 gi|262167704|ref|ZP_06035407.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC27]
 gi|262191357|ref|ZP_06049548.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae CT
           5369-93]
 gi|297579589|ref|ZP_06941517.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae RC385]
 gi|298497889|ref|ZP_07007696.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MAK 757]
 gi|21264054|sp|Q9KQB5|SUCC_VIBCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030225|sp|A5F6G6|SUCC_VIBC3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778454|sp|C3LP35|SUCC_VIBCM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|9656633|gb|AAF95231.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548847|gb|EAX58890.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 2740-80]
 gi|124122501|gb|EAY41244.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-3]
 gi|125621400|gb|EAZ49736.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V51]
 gi|126511062|gb|EAZ73656.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae NCTC 8457]
 gi|126520770|gb|EAZ77993.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae B33]
 gi|146315015|gb|ABQ19554.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae O395]
 gi|148875589|gb|EDL73724.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 623-39]
 gi|149740201|gb|EDM54354.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-2]
 gi|150423089|gb|EDN15037.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae AM-19226]
 gi|227010099|gb|ACP06311.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae M66-2]
 gi|227013982|gb|ACP10192.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae O395]
 gi|229332673|gb|EEN98159.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           12129(1)]
 gi|229337672|gb|EEO02689.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae bv.
           albensis VL426]
 gi|229340967|gb|EEO05972.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TM
           11079-80]
 gi|229343762|gb|EEO08737.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC9]
 gi|229348921|gb|EEO13878.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TMA
           21]
 gi|229351902|gb|EEO16843.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae B33]
 gi|229355331|gb|EEO20252.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae BX
           330286]
 gi|229370026|gb|ACQ60449.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           MJ-1236]
 gi|254844876|gb|EET23290.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MO10]
 gi|255737002|gb|EET92398.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholera CIRS
           101]
 gi|262023909|gb|EEY42607.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC27]
 gi|262030281|gb|EEY48924.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae INDRE
           91/1]
 gi|262032776|gb|EEY51323.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae CT
           5369-93]
 gi|297537183|gb|EFH76016.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae RC385]
 gi|297542222|gb|EFH78272.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MAK 757]
 gi|327484617|gb|AEA79024.1| Succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           LMA3894-4]
          Length = 388

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 QMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|261341314|ref|ZP_05969172.1| succinyl-CoA ligase [ADP-forming] subunit beta [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316618|gb|EFC55556.1| succinyl-CoA ligase [ADP-forming] subunit beta [Enterobacter
           cancerogenus ATCC 35316]
          Length = 388

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKDEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLANIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|297832640|ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330042|gb|EFH60461.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 421

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 197/398 (49%), Positives = 263/398 (66%), Gaps = 8/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV  SS+   + AI+   P     VVKSQI AGGRG G 
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQEVFPNESELVVKSQILAGGRGLGT 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK   +  KGGV +    +    DI  ++LG  L+TKQTGP G  V+ VY+ +   ++ E
Sbjct: 87  FK---SGLKGGVHIVK--RGQAEDIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNE 141

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y S+++DR S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L
Sbjct: 142 MYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGL 201

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +   R D  +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  
Sbjct: 202 APKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQK 261

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 262 EIFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 321

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+
Sbjct: 322 DVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVSLKVPVVV 381

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 382 RLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKAL 419


>gi|254369720|ref|ZP_04985730.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122679|gb|EDO66808.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 387

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAYNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|301157329|emb|CBW16818.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|323129048|gb|ADX16478.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 388

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMLYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|89256837|ref|YP_514199.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica LVS]
 gi|156503005|ref|YP_001429070.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009270|ref|ZP_02274201.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368116|ref|ZP_04984136.1| succinyl-CoA synthetase, beta subunit [Francisella tularensis
           subsp. holarctica 257]
 gi|290954375|ref|ZP_06558996.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312196|ref|ZP_06802998.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122500388|sp|Q2A253|SUCC_FRATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189029910|sp|A7NDR1|SUCC_FRATF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89144668|emb|CAJ79992.1| Succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica LVS]
 gi|134253926|gb|EBA53020.1| succinyl-CoA synthetase, beta subunit [Francisella tularensis
           subsp. holarctica 257]
 gi|156253608|gb|ABU62114.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 387

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V + ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|187932029|ref|YP_001892014.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226734955|sp|B2SDM1|SUCC_FRATM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187712938|gb|ACD31235.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 387

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAARAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|187925265|ref|YP_001896907.1| succinyl-CoA synthetase subunit beta [Burkholderia phytofirmans
           PsJN]
 gi|226734932|sp|B2SYE8|SUCC_BURPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187716459|gb|ACD17683.1| succinyl-CoA synthetase, beta subunit [Burkholderia phytofirmans
           PsJN]
          Length = 389

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYSEQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADSMEE 376


>gi|293397232|ref|ZP_06641505.1| succinyl-CoA ligase subunit beta [Serratia odorifera DSM 4582]
 gi|291420252|gb|EFE93508.1| succinyl-CoA ligase subunit beta [Serratia odorifera DSM 4582]
          Length = 388

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K+ IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFAKIFMGLATLFIERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDERESRAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|115315224|ref|YP_763947.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica OSU18]
 gi|122324779|sp|Q0BKS4|SUCC_FRATO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115130123|gb|ABI83310.1| succinate--CoA ligase (ADP-forming) [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 387

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V + ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|319779688|ref|YP_004130601.1| Succinyl-CoA ligase [ADP-forming] beta chain [Taylorella
           equigenitalis MCE9]
 gi|317109712|gb|ADU92458.1| Succinyl-CoA ligase [ADP-forming] beta chain [Taylorella
           equigenitalis MCE9]
          Length = 386

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 191/396 (48%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L+K+ V V +G+   SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILKKFGVNVLRGIPAFSVEEAVKAAEELGGNVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     ++LG  L+T QTGP G +VN + +E+GADI +E YL
Sbjct: 52  -GGRGKGGGVKLAKSIDEVRDLASQMLGMQLVTHQTGPQGQKVNRLLIEEGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR S     +AS++GG++IEEVA + P+KI K+ IDP   V+ E    L   + + 
Sbjct: 111 GIVTDRGSQRNCIMASSEGGVNIEEVAHETPEKIIKVFIDPGHDVSYEQGLELVRGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      DL   LYKA+ + D +L EINPLI   +G++  LD+K +FD NAL RH +I 
Sbjct: 171 SELHDQAIDLIQKLYKAYWETDATLAEINPLIHTGDGKVIALDAKFNFDSNALSRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED  EIEA +++L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 EYRDLDEEDPAEIEASKYDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+    SVK IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLRSDSVKAILVNIFGGIMRCDVIAEGVVAACKAVDLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++AESGL +I+A  + +AA K+V A K
Sbjct: 351 GTNEEQGKKILAESGLPIISADTMAEAATKVVEAAK 386


>gi|269959063|ref|YP_003328852.1| succinyl-CoA synthetase beta subunit [Anaplasma centrale str.
           Israel]
 gi|269848894|gb|ACZ49538.1| succinyl-CoA synthetase beta subunit [Anaplasma centrale str.
           Israel]
          Length = 388

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 263/396 (66%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L  + V V +GV + SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 1   MNIHEFQAKGVLSSFGVTVPRGVAVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S ++++L S L+T QT P G +VN VY+E+G DI +E Y+
Sbjct: 58  -------GGVKIGKTKDEVKSLVKQMLHSVLVTHQTSPEGQKVNKVYLEEGVDIGKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DIE VAK+ P  +  + IDPL G  S     LC    L 
Sbjct: 111 SAVVDRSVGRVSIIFSSEGGVDIETVAKERPNMVSVVHIDPLYGFRSFHGQELCRRFGL- 169

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G  ++ G   +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I
Sbjct: 170 GPKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 AKLQDPDEHAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +++PLV+RL
Sbjct: 290 GGGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVDVPLVVRL 348

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 349 SGTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 384


>gi|323527261|ref|YP_004229414.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. CCGE1001]
 gi|323384263|gb|ADX56354.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1001]
          Length = 389

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|87308498|ref|ZP_01090639.1| succinyl-CoA synthetase (beta subunit) [Blastopirellula marina DSM
           3645]
 gi|87289055|gb|EAQ80948.1| succinyl-CoA synthetase (beta subunit) [Blastopirellula marina DSM
           3645]
          Length = 394

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 190/395 (48%), Positives = 257/395 (65%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR   V V + +V  +   A  A + L G + VVK+QIHAGGRGKG  K
Sbjct: 1   MKIHEYQAKQLLRDAGVAVPRNIVAKTPEEAAKAYEELGGKIAVVKAQIHAGGRGKGTVK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +  AD +G V++  S     +    +LG  L+T QTGP G  V+ V VE+G DI RELY+
Sbjct: 61  D-NADQRG-VQLVKSADEAKAVAAALLGKELVTIQTGPEGKLVSQVLVEEGCDIARELYM 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     + S++GG +IEEVA   P+ I K   DP  G  +  V  LC  L ++
Sbjct: 119 GIVLDRAAAKPVLMMSSEGGTEIEEVAAHSPELILKEHFDPSRGPDAFQVRKLCKKLGIE 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            L K + D D SLLEINPL+I  +G +  LD K++FD N L+RH  I 
Sbjct: 179 GATIKSAYKFIQGLCKVYVDTDCSLLEINPLVITGSGDMIALDCKMNFDTNGLFRHPKIV 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEE+  E++A    LSY+ L+GNIGC+VNGAGLAMATMDIIKL+GG P+NFLDVG
Sbjct: 239 ELRDLSEEEPAEVKAADTGLSYVKLEGNIGCLVNGAGLAMATMDIIKLHGGEPSNFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D+V  AF+I+ +D +VK +L+NIFGGIMRC  +   ++ A K V  N+PLV+RLE
Sbjct: 299 GGANVDQVTEAFRILLADKNVKAVLVNIFGGIMRCTTIATAVVEAYKSVGFNVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  V+ G ++++ESG+ +I    L DAA+K+V +V
Sbjct: 359 GTEVEQGRKILSESGIPIIIGDGLTDAAKKVVASV 393


>gi|261210014|ref|ZP_05924313.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC341]
 gi|260840960|gb|EEX67497.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC341]
          Length = 388

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGDMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|157369512|ref|YP_001477501.1| succinyl-CoA synthetase subunit beta [Serratia proteamaculans 568]
 gi|189081797|sp|A8GB83|SUCC_SERP5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157321276|gb|ABV40373.1| succinyl-CoA synthetase, beta subunit [Serratia proteamaculans 568]
          Length = 388

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 192/395 (48%), Positives = 262/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K+ IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVGQFAKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDLSQEDERESRAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|134302424|ref|YP_001122394.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|189030243|sp|A4IZC2|SUCC_FRATW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|134050201|gb|ABO47272.1| succinyl-CoA synthetase, beta chain [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 387

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 196/396 (49%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALKGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|27363638|ref|NP_759166.1| succinyl-CoA synthetase subunit beta [Vibrio vulnificus CMCP6]
 gi|320157039|ref|YP_004189418.1| succinyl-CoA ligase (ADP-forming) subunit beta [Vibrio vulnificus
           MO6-24/O]
 gi|33301655|sp|Q8DFQ1|SUCC_VIBVU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|27359754|gb|AAO08693.1| Succinyl-CoA ligase [ADP-forming] beta chain [Vibrio vulnificus
           CMCP6]
 gi|319932351|gb|ADV87215.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio vulnificus
           MO6-24/O]
          Length = 388

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRKVLAESGLDIIAAESLTDAAQKVVAAAEG 387


>gi|326794798|ref|YP_004312618.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinomonas
           mediterranea MMB-1]
 gi|326545562|gb|ADZ90782.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinomonas
           mediterranea MMB-1]
          Length = 388

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV+KG  + +   A  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFADYGLPVSKGYAVDTPEEAVEAAKKIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVDSHEEVSAFAANWLGKNLVTYQTDENGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL+G        +   + L 
Sbjct: 111 GAVVDRSTRKVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGAQPYQAREMAFKMGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L + F D D +LLEINPL+I   G L  LD KI+ D NA+YR   +Q
Sbjct: 171 PEQTKQFTKIFLGLSQMFHDFDFALLEINPLVITDEGNLHCLDGKINIDSNAVYRQKKMQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AV++V + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNAEKGREVLANSDLDIIAATSLKDAAEQVVKAAEG 387


>gi|209518325|ref|ZP_03267150.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. H160]
 gi|209501244|gb|EEA01275.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. H160]
          Length = 389

 Score =  362 bits (928), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDSEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|188996560|ref|YP_001930811.1| succinyl-CoA synthetase, beta subunit [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|226734995|sp|B2V8I4|SUCC_SULSY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|188931627|gb|ACD66257.1| succinyl-CoA synthetase, beta subunit [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 389

 Score =  362 bits (928), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 186/394 (47%), Positives = 254/394 (64%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK + RKY +PV +G     V  A  A + L     VVK+QIHAGGRGK    
Sbjct: 1   MKVHEHQAKEIFRKYGLPVPRGYPAFDVKEAVEAAEELGTWPVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V     E+LG  L T QTGP G  V+ +Y+E+   I +E Y+
Sbjct: 58  -------GGVKLAKSIEEVQQIASELLGKKLATFQTGPEGLPVSRLYIEEATAIDKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+      + S  GGM+IEEVA   P+ I    I+P IG+ S     L   L L 
Sbjct: 111 AITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITQTIEPFIGLRSYHARELALKLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  LYK + + D S++EINPL++ K+G + +LD+KI FDDN L+RH +I 
Sbjct: 171 KNLLNKAASIFTTLYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNGLFRHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++    E+EAK+ NL+YI LDGNI CMVNGAGLAM+TMD IKL GG PANFLDVG
Sbjct: 231 EMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+  ++A AFKII SD +VK I INIFGGI+RCD L +GI++A KEV IN+P+++R+E
Sbjct: 291 GSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV++G +++ ESGL +ITA  + + A K V A
Sbjct: 351 GTNVELGKKMLQESGLPLITADTMWEGALKAVEA 384


>gi|145299311|ref|YP_001142152.1| succinyl-CoA synthetase subunit beta [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|189046875|sp|A4SND2|SUCC_AERS4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|142852083|gb|ABO90404.1| succinyl-CoA synthetase, beta subunit [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 388

 Score =  362 bits (928), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G   ++   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFAEYGLPVSEGYACATPQEAAEAADKIGGTTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   + +  +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE++A + P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVDIEKIAHETPELIHKAAIDPLVGPQAYQARELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D +LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSKVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G R +A+SGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLTDAAQQVVKAAE 386


>gi|167855519|ref|ZP_02478282.1| seryl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853385|gb|EDS24636.1| seryl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 388

 Score =  362 bits (928), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +  KY +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQIFAKYKLPVSQGIACKTADEAVEAIKQLKGDAWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +YVE+ A I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYVEETAGIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA   P+ + K+ IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRSSQKVVFMASSAGGMNIEEVAAKTPELLHKVAIDPLVGGMAYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F    K F +KD+SLLEINPL++   G L  LD+K+  D NALYR  ++ 
Sbjct: 171 GDQIKQFSFIFTQQAKLFVEKDLSLLEINPLVVTTEGNLLCLDAKMVVDGNALYRQPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREALAESHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++  GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDKAVKAVLVNIFGGIVRCDLIADGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAELGREILAKSGLNIIAAATLTDAAVEAVKAAGG 387


>gi|189184256|ref|YP_001938041.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Ikeda]
 gi|226734968|sp|B3CTW0|SUCC_ORITI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189181027|dbj|BAG40807.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Ikeda]
          Length = 386

 Score =  362 bits (928), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 190/395 (48%), Positives = 261/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L KYNVP+  G+ I      + AI +L    +V+K+QIHAGGR  G   
Sbjct: 1   MNIHEYQAKEILSKYNVPIQPGIAILKYEDIDYAIDSLATDTFVIKAQIHAGGRKIGGGI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  D      +           + + G  L+T QTGP G +V  +Y+E  A I  ELYL
Sbjct: 61  KISNDKNEAKNLA----------KNMWGMNLVTPQTGPKGQKVQRIYIESAAKIKLELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR++  + F+AS++GG++IEEVA   P KI K+ I+ L G+       +   L L 
Sbjct: 111 GAVIDRSNHCITFMASSEGGINIEEVAHTNPDKIIKVKINILTGIQPFHSRKIIFQLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y    + D + +EINPLII  + +L  LD+KI+FDD+AL+R   IQ
Sbjct: 171 GDLAKQMAKIMSAVYSMLINTDATQVEINPLIITLDDKLIALDAKINFDDSALFRQPLIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD  EED  E+ A + +LSY+ ++GNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 EMRDEDEEDQLELRATKADLSYVRMNGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD+++VA A KII+SD +VKGILINIFGGIMRCD++ +G+L+A KE+ ++IPLV+RL 
Sbjct: 291 GSADKERVAEALKIISSDQNVKGILINIFGGIMRCDIIAEGVLAAAKEINLSIPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G  +++ S L ++ A DLDDAA+KIV AV
Sbjct: 351 GTNFELGKEILSNSKLQIVAANDLDDAARKIVEAV 385


>gi|198282727|ref|YP_002219048.1| succinyl-CoA synthetase subunit beta [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665538|ref|YP_002424921.1| succinyl-CoA synthase, beta subunit [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|226733921|sp|B7J4G8|SUCC_ACIF2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226733922|sp|B5EMG2|SUCC_ACIF5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|198247248|gb|ACH82841.1| succinyl-CoA synthetase, beta subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517751|gb|ACK78337.1| succinyl-CoA synthase, beta subunit [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 387

 Score =  361 bits (927), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 190/391 (48%), Positives = 256/391 (65%), Gaps = 20/391 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +  VPV + +   SV  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKRLLAEEGVPVPRAIPAFSVREAVNQARELGGPAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S+  V    +E+LG  L+T QTGP G  V  + +E+ + I RELYL
Sbjct: 58  -------GGVRMVDSIAQVEKAAQELLGKPLVTAQTGPQGQHVAALLIEEPSRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-----CD 175
           +L+VDR    + F+A+ +GG+DIEE+A   P+ + +++++P  G        L      D
Sbjct: 111 ALMVDRGQARITFLATREGGVDIEELAASRPEALHRVVVEPSTGFLPFQARQLGFQFGLD 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
             ++Q   RI  G     +Y+     D  ++EINPL I   GRL  LD+K+  DDNALYR
Sbjct: 171 AGQVQQLTRIMQG-----MYRLAQRLDALMVEINPLAITAEGRLLALDAKVVMDDNALYR 225

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H +  EL D +++D REI A+Q  L+YI+L+GNIGCMVNGAGLAMATMD+IKL+GG PAN
Sbjct: 226 HPESDELFDSTQQDGREITARQFGLNYISLEGNIGCMVNGAGLAMATMDLIKLHGGEPAN 285

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA  DKV  AFK+I SD+ VK IL+NIFGGI RCD+L +GI+ A  EV +++P+
Sbjct: 286 FLDVGGGAAADKVNQAFKLILSDTRVKAILVNIFGGITRCDLLAEGIIQAAAEVGLHLPV 345

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           V+RLEG   + G  L+ ESGL++ITA  L D
Sbjct: 346 VVRLEGTRKEEGMALLRESGLSLITADGLTD 376


>gi|254282544|ref|ZP_04957512.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           NOR51-B]
 gi|219678747|gb|EED35096.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           NOR51-B]
          Length = 389

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 189/390 (48%), Positives = 267/390 (68%), Gaps = 10/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ KAL  +Y +PV+ G  + +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKALFAEYGLPVSTGYAVDTPADAAAAAEKIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSPEECSAFAEQWLGKNLVTYQTDENGQPVSRILVESCTDIAEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+KI + +IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPEKILRAIIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F DKD++L+E+NPL+I + G L  LD+K+  D NA+YRH DIQ
Sbjct: 171 GVQVKQFVTIFMGLAKLFTDKDLALIEVNPLVITEEGNLHCLDAKLGVDGNAVYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 AMHDPSQEDEREANAAEWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G N ++G +++A+SGLN++ A  L DAA++
Sbjct: 351 GNNAELGRKVLADSGLNILAASSLTDAAEQ 380


>gi|227327547|ref|ZP_03831571.1| succinyl-CoA synthetase subunit beta [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 388

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 192/395 (48%), Positives = 261/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L  AAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAV 385


>gi|37679218|ref|NP_933827.1| succinyl-CoA synthetase subunit beta [Vibrio vulnificus YJ016]
 gi|71153553|sp|Q7MMN3|SUCC_VIBVY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|37197961|dbj|BAC93798.1| succinyl-CoA synthetase beta subunit [Vibrio vulnificus YJ016]
          Length = 388

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +P+ +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPIPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRKVLAESGLDIIAAESLTDAAQKVVAAAEG 387


>gi|317491188|ref|ZP_07949624.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920735|gb|EFV42058.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 388

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEEIRAFAENWLGKRLVTYQTDALGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA + P  I K  IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVADETPHLIHKTAIDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+S D NAL+R  +++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLSADGNALFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDARESQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|75147005|sp|Q84LB6|SUCB_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; Short=SlSCoALbeta; Flags: Precursor
 gi|27803873|gb|AAO22150.1| succinyl CoA ligase beta subunit [Solanum lycopersicum]
          Length = 417

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 191/398 (47%), Positives = 267/398 (67%), Gaps = 8/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV ++S+   + AI+   P     VVKSQ+ AGGRG G 
Sbjct: 24  LNIHEYQGAELMSKYGINVPKGVAVASLDEVKKAIQDVFPNQSEVVVKSQVLAGGRGLGT 83

Query: 59  FKELPADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK      +GGV +  + ++   DI  ++LG  L+TKQTG  G  V+ VY+ +   ++ E
Sbjct: 84  FKN---GFQGGVHIVKADQA--EDIASKMLGQILVTKQTGAQGKVVSKVYLCEKMSLVNE 138

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y S+++DR +     IA  +GG  IE++A+ +P  I K+ ID   G++  D A + D L
Sbjct: 139 MYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGISDADAAKVVDGL 198

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +   R D  +    LYK FC+ D ++LEINPL    + +L   D+K++FDDNA YR  
Sbjct: 199 APKVADRNDSIEQVKKLYKLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQK 258

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  LRD S+ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 259 EIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 318

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+T+D  VK IL+NIFGGIM+CDV+  GI++A K+V++ +P+++
Sbjct: 319 DVGGNATEGQVVEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIV 378

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 379 RLEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKAL 416


>gi|170750065|ref|YP_001756325.1| malate--CoA ligase subunit beta [Methylobacterium radiotolerans JCM
           2831]
 gi|170656587|gb|ACB25642.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 392

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 186/394 (47%), Positives = 256/394 (64%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG +  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAIAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    +++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAAKDLLGKRLVTHQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P  + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPDSLIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRPGIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PLV+RL 
Sbjct: 291 GGASPERVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVQAAREVKIDVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G +++AESGL++ITA  L +AA+K V A
Sbjct: 351 GTNVEAGKKILAESGLDLITADTLAEAAKKAVDA 384


>gi|261822341|ref|YP_003260447.1| succinyl-CoA synthetase subunit beta [Pectobacterium wasabiae
           WPP163]
 gi|261606354|gb|ACX88840.1| succinyl-CoA synthetase, beta subunit [Pectobacterium wasabiae
           WPP163]
          Length = 388

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 191/395 (48%), Positives = 261/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L  AAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAV 385


>gi|308272220|emb|CBX28826.1| Succinyl-CoA ligase [ADP-forming] subunit beta [uncultured
           Desulfobacterium sp.]
          Length = 387

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 198/395 (50%), Positives = 251/395 (63%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L  KY VPV  G V  +   A     +L     VVK+QIHA         
Sbjct: 1   MKIHEYQAKELFGKYGVPVPNGGVAFNSEEAVKVSDSLGCFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V S    ILG  L+T QTGP G  V  V VE G DI +ELYL
Sbjct: 52  -GGRGKGGGVKLSKSADEVRSTSESILGMNLVTNQTGPEGRLVKKVLVEQGLDIKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR++     +AS  GGMDIEEV++  P+KI K+ IDP+ G+           L L 
Sbjct: 111 GIIPDRSTAKFVIMASEAGGMDIEEVSEKTPEKIIKIFIDPIAGIYPYHCREAAYGLNLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +  +   +  +LYK F D D SLLEINPL+I    ++  LD+KI+FDDNAL+RH DI 
Sbjct: 171 PGSVKEFTGMLNSLYKLFTDYDCSLLEINPLVITAEDKVIALDAKITFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED  E+EA + NL+YI +DGN+G MVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 231 EYRDIDEEDPLEVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIKLAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V   FKII  D +VKG+ INIFGGI+RCDVL +G++ A K+  I +P+V+R+E
Sbjct: 291 GGASAEMVENGFKIILGDKNVKGVFINIFGGILRCDVLAEGVVKAAKKTGIAVPVVIRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG ++++ESGLN+ITAIDL DA  K+   V
Sbjct: 351 GTNVEIGRKILSESGLNLITAIDLQDAVGKVAAIV 385


>gi|317047347|ref|YP_004114995.1| succinyl-CoA synthetase subunit beta [Pantoea sp. At-9b]
 gi|316948964|gb|ADU68439.1| succinyl-CoA synthetase, beta subunit [Pantoea sp. At-9b]
          Length = 388

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDAEGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLATMFLERDLALVEINPLVVTKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|120554084|ref|YP_958435.1| succinyl-CoA synthetase, beta subunit [Marinobacter aquaeolei VT8]
 gi|189081746|sp|A1TZS9|SUCC_MARAV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120323933|gb|ABM18248.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Marinobacter
           aquaeolei VT8]
          Length = 388

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +   A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIACDTPKEAVAAADEIGGDGWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +     + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F + D++L+EINPL+I   G L  LD+K+  D NALYR   I 
Sbjct: 171 GKQIGQFTKIFLGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKKIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+EDSRE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 EMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAA+++V A  G
Sbjct: 351 GNNAELGTKVLAESGLNIIAATSLADAAEQVVKAAGG 387


>gi|225438067|ref|XP_002275953.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147782941|emb|CAN72294.1| hypothetical protein VITISV_037293 [Vitis vinifera]
 gi|297744178|emb|CBI37148.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 193/396 (48%), Positives = 260/396 (65%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGP-LYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV + S+      I+   P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMSKYGINVPKGVAVGSIEEVRKTIQDVFPKENELVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +  +   V     ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 88  FK---SGLKGGVHIVKT-DQVEELAGKMLGQILVTKQTGPQGKVVSKVYLCEKMSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR+S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 144 YFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    +    LYK FC+ D +LLEINP+    + +L   D+K++FDDNA +R   
Sbjct: 204 PKVADRNASIEQVKKLYKLFCECDCTLLEINPIAETSDNQLVAADAKLNFDDNAAFRQKH 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDATQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+T+D  VK IL+NIFGGIM+CD++  GI++A KEV + +P+V+R
Sbjct: 324 VGGNASESQVVEAFKILTADDKVKAILVNIFGGIMKCDIIASGIVNAAKEVSLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 384 LEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKA 419


>gi|119503180|ref|ZP_01625264.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2080]
 gi|119460826|gb|EAW41917.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2080]
          Length = 389

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ KAL  +Y +PV+ G  +S+   A SA + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKALFAQYGLPVSVGHAVSTPEEARSAAEKIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +     L   L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDSPDDAAAFAEHWLDKRLVTYQTDVDGQPVSKILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA++ P+KI +  IDPL G        L   L L+
Sbjct: 111 GAVLDRASRRIVFMASTEGGVEIEKVAEETPEKILRAEIDPLTGPQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F DKD++L+E+NPL+I   G L  LD+KI  D NALYRH D++
Sbjct: 171 GVQVKQFVAIFVGLAKLFQDKDLALIEVNPLVITDEGNLHCLDAKIVADSNALYRHADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A + +L+Y+ALDG+IGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAHAAEWDLNYVALDGSIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN++ A  L DAA+++V A  G
Sbjct: 351 GNNAELGQKVLADSGLNIMAASSLTDAAEQVVAAAGG 387


>gi|307730898|ref|YP_003908122.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. CCGE1003]
 gi|307585433|gb|ADN58831.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1003]
          Length = 389

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAVLQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|224370324|ref|YP_002604488.1| succinyl-CoA synthetase subunit beta [Desulfobacterium
           autotrophicum HRM2]
 gi|259511779|sp|C0QLM0|SUCC_DESAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|223693041|gb|ACN16324.1| SucC1 [Desulfobacterium autotrophicum HRM2]
          Length = 385

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 202/395 (51%), Positives = 256/395 (64%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKAL R + VPV  G V  SV  A    + L G   VVK+QIHAGGRGKG   
Sbjct: 1   MKIHEYQAKALFRTFGVPVPDGGVAFSVEEAVDVARGLGGYPVVVKAQIHAGGRGKGGGV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +L A  +   R             EILG TL+T QTGP G  V  + VE G  I +ELYL
Sbjct: 61  KLAASEEEARRFAG----------EILGMTLVTHQTGPQGREVKKLLVEAGQKIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  +  +AS +GGMDIE VA   P+KI K+ +DPL G+    +  +   L L 
Sbjct: 111 SILVDRATAGIVIMASQEGGMDIETVAAKTPEKIIKVRVDPLTGIQGYYLRQVGFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   L  NLY  F   D SLLEINPLI+  + R+  LD+K+  D NAL+RH D+ 
Sbjct: 171 KAALKEFSALLKNLYTLFVKNDCSLLEINPLILTSDDRVMALDAKVDIDSNALFRHKDLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED  E+EA + NL+YI LDGN+G +VNGAGLAMATMDIIK  G  PANF+DVG
Sbjct: 231 ELRDLDEEDPLEVEASKFNLNYINLDGNVGNIVNGAGLAMATMDIIKNAGAEPANFMDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF II  D  VK +LINIFGGI+RCDV  +GI++A K+  I IP+V+R+E
Sbjct: 291 GGATAEMVENAFSIILRDKKVKAVLINIFGGILRCDVFAEGIVTAAKKSGITIPVVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  ++A+SGLN+I A++L DAA+K+  A+
Sbjct: 351 GTNVERGKEILAQSGLNLINAVNLKDAAEKVAAAI 385


>gi|126668314|ref|ZP_01739273.1| succinyl-CoA synthetase subunit beta [Marinobacter sp. ELB17]
 gi|126627231|gb|EAZ97869.1| succinyl-CoA synthetase subunit beta [Marinobacter sp. ELB17]
          Length = 388

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 196/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G+  S+   A +A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSQGIACSTPDEAVAAAEKIGGDSWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKNTDDIRAFAEQWLGKKLVTFQTDEHGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLEINPL+I   G L  LD+KI  D NALYR   +Q
Sbjct: 171 GKQIGQFTKIFMGLAKLFEDYDLALLEINPLVITPAGDLHCLDAKIGVDGNALYRQKRLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+EDSRE EA    L+Y+ALDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 AMRDPSQEDSREAEAAAWELNYVALDGNIGCMVNGAGLAMGTMDIIKLAGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++++AESGLN+I A  L DAA+++V    G
Sbjct: 351 GNNAELGSKVLAESGLNIIAASSLADAAEQVVKVAGG 387


>gi|319942903|ref|ZP_08017186.1| succinyl-CoA ligase subunit beta [Lautropia mirabilis ATCC 51599]
 gi|319743445|gb|EFV95849.1| succinyl-CoA ligase subunit beta [Lautropia mirabilis ATCC 51599]
          Length = 388

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 182/381 (47%), Positives = 255/381 (66%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L++Y V V +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILKRYGVTVPRGIPCFNVEEAVKAAEQLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V      ILG  L+T QTGP G +V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQHATSILGMQLVTHQTGPEGQKVRRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  +  +AS++GGMDIEEVA   P+KI K+  D   G+T  +   L   + + 
Sbjct: 111 GIVIDRQSQKICVMASSEGGMDIEEVAAKTPEKIHKVFCDVAQGLTDAEADDLATRIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 AASLPKARQVLQGLYKAFFETDASLAEINPLILTGSGDVIALDAKLNFDSNALFRHADIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EED  E+EA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG+PANFLDVG
Sbjct: 231 EMRDLDEEDPAEVEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKLMLKNKGVKAILVNIFGGIMRCDTIAAGVIAASKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N ++G +++A+SGL +I A
Sbjct: 351 GTNEELGKQMLADSGLPIIAA 371


>gi|88798685|ref|ZP_01114268.1| succinyl-CoA synthetase subunit beta [Reinekea sp. MED297]
 gi|88778448|gb|EAR09640.1| succinyl-CoA synthetase subunit beta [Reinekea sp. MED297]
          Length = 389

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 186/390 (47%), Positives = 260/390 (66%), Gaps = 10/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +      AI  +PG ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKQYGLPVSEGYACDTPEEVVDAIGKIPGEMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S           LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSADEAKEFAAHWLGKNLVTFQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE VA++ P+KI + +IDPL+G        L   L L+
Sbjct: 111 GAVVDRATRRIVFMASTEGGVEIETVAEETPEKILRAIIDPLVGPQPYQARELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F DKD++L+EINPL+I   G L  LD+K+  D NALYRH D+Q
Sbjct: 171 GEQIKQFTKIFLGLANLFIDKDLALIEINPLVITDEGNLHCLDAKLGVDGNALYRHKDLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D ++ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 AMQDPTQEDEREAHAAEWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK + +NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVFVNIFGGIVRCDMIAEGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G N + G++ +A+SGLN+I A  L + A+K
Sbjct: 351 GNNAEAGSKKLADSGLNIIAASSLTEGAEK 380


>gi|56460607|ref|YP_155888.1| succinyl-CoA synthetase subunit beta [Idiomarina loihiensis L2TR]
 gi|81362170|sp|Q5QU21|SUCC_IDILO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56179617|gb|AAV82339.1| Succinyl-CoA synthetase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 388

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 186/384 (48%), Positives = 252/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L +++ +PV++G    +   A  A K + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEFGLPVSEGYACDTADEAVEAAKRIGGDIWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   + LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSLDDVRAFAEQWLGKNLVTFQTDEKGQPVAKILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE VA++ P+KI K  IDP +G        L   L L 
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIETVAEETPEKILKAEIDPTVGAQPYQGRELGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F   D++LLEINPL+I   G +  LD+K+  D NALYR   I+
Sbjct: 171 PDQVKQFTKVFMGLAKMFEQYDLALLEINPLVITDEGNVHCLDAKVGIDSNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE EA +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAEAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDSSVK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+++RLE
Sbjct: 291 GGATKERVSEAFKIILSDSSVKAVLVNIFGGIVRCDMIAEGIIGAVEEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + + ESGLN+I A  L
Sbjct: 351 GNNAELGTQKLNESGLNIIAAESL 374


>gi|288819190|ref|YP_003433538.1| succinyl-CoA synthetase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|46849523|dbj|BAD17851.1| succinyl-CoA synthetase large subunit [Hydrogenobacter
           thermophilus]
 gi|288788590|dbj|BAI70337.1| succinyl-CoA synthetase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308752772|gb|ADO46255.1| succinyl-CoA synthetase, beta subunit [Hydrogenobacter thermophilus
           TK-6]
          Length = 383

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 184/390 (47%), Positives = 262/390 (67%), Gaps = 14/390 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +L++YN+PV +G V  S+  A    + L G   VVK+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKEILKRYNLPVPEGKVAFSLQEALQVAEELSGYPLVVKAQVHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +   +  +LG  L T Q  P G  V+ V++E   +I +E YL
Sbjct: 58  -------GGVKLVKNQEELREAVESMLGKVLKTFQC-PEGKPVSRVWIEKATNIEKEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR+     F+AS +GGM+IEEVAK+ P+ I  L IDP +G+       +   L L 
Sbjct: 110 SITLDRSVSKPVFMASAEGGMEIEEVAKEKPEAIHTLHIDPALGLMPFQARKIAFKLGLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +    +   LYK + D D SL+EINPL++ K G L +LD+K+  DDNA+ RH D++
Sbjct: 170 VNEFVR---ISLALYKMYTDMDASLVEINPLVLTKEGNLILLDAKVEIDDNAMLRHKDVE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D+++ D  EIEAK+++L+YI LDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 227 ELEDLTQLDPLEIEAKRYSLNYIKLDGNIGCMVNGAGLAMTTMDIIKLAGGDPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A AF+I+ +D +VK + INIFGGI+RCD L +G++ A K V+I +P+V+R+E
Sbjct: 287 GGANVEQIANAFRILMADKNVKAVFINIFGGILRCDRLAQGLIEAAKMVEIKVPVVVRME 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G NV+ G RL++ESGLN + A+D+ D A+K
Sbjct: 347 GTNVEEGRRLLSESGLNFVNAVDMWDGAKK 376


>gi|311694415|gb|ADP97288.1| succinyl-CoA synthetase, beta subunit [marine bacterium HP15]
          Length = 388

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 195/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIACDTPKEAVDAAGEIGGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +     + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEEIREFAEKWLGQNLVTYQTDENGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F + D++L+EINPL+I   G L  LD+K+  D NALYR   I 
Sbjct: 171 GKQIGQFTKIFVGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKKIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+EDSRE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 EMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G +++AESGLN+I A  L +AA+++V A  G
Sbjct: 351 GNNAEKGTQVLAESGLNIIAATSLSNAAEQVVKAAGG 387


>gi|15225353|ref|NP_179632.1| succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial,
           putative / succinyl-CoA synthetase, beta chain, putative
           / SCS-beta, putative [Arabidopsis thaliana]
 gi|21264030|sp|O82662|SUCB_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|3660469|emb|CAA05024.1| succinyl-CoA-ligase beta subunit [Arabidopsis thaliana]
 gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|330251911|gb|AEC07005.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
           thaliana]
          Length = 421

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 195/398 (48%), Positives = 263/398 (66%), Gaps = 8/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV  SS+   + AI+   P     VVKSQI AGGRG G 
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGT 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK   +  KGGV +    +    +I  ++LG  L+TKQTGP G  V+ VY+ +   ++ E
Sbjct: 87  FK---SGLKGGVHIVK--RDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNE 141

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y S+++DR S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L
Sbjct: 142 MYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGL 201

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +   R D  +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  
Sbjct: 202 APKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQK 261

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 262 EVFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 321

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+
Sbjct: 322 DVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVV 381

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 382 RLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKAL 419


>gi|83284007|gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 191/398 (47%), Positives = 266/398 (66%), Gaps = 8/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV ++S+   + AI+   P     VVKSQ+ AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPKGVAVASLDEVKKAIQDVFPNQSEVVVKSQVLAGGRGLGT 87

Query: 59  FKELPADSKGGVR-VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK      +GGV  V++     I+   ++LG  L+TKQTG  G  V+ VY+ +   ++ E
Sbjct: 88  FKN---GFQGGVHIVKADQAEEIAS--KMLGQILVTKQTGAQGKVVSKVYLCEKMSLVNE 142

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y S+++DR +     IA  +GG  IE++A+ +P  I K+ ID   G++ ED A + D L
Sbjct: 143 MYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGISDEDAAKVVDGL 202

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +   R D  +    LY  FC+ D ++LEINPL    + +L   D+K++FDDNA YR  
Sbjct: 203 APKVADRNDSIEQVKKLYNLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQK 262

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  LRD S+ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 263 EIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 322

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+T+D  VK IL+NIFGGIM+CDV+  GI++A K+V++ +P+++
Sbjct: 323 DVGGNATEGQVVEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIV 382

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 383 RLEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKAL 420


>gi|239817449|ref|YP_002946359.1| succinyl-CoA synthetase, subunit beta [Variovorax paradoxus S110]
 gi|239804026|gb|ACS21093.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus S110]
          Length = 389

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 189/396 (47%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY VP  +G    S   A  A   L G  +VVK+QIHA         
Sbjct: 1   MNIHEYQGKDVLRKYGVPTPRGYACFSPDEAADAAAQLGGRAWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S   V     E+LG TL T QTGP G  V  + VE+  +I +E YL
Sbjct: 52  -GGRGKGGGVRLAWSAAEVRRHADELLGMTLRTHQTGPQGRLVKRLLVEESVEIEKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + VDR S  VA +AS++GGMDIE+VA   P+KI KL +DP  GV + +   L   +   
Sbjct: 111 GMAVDRESRRVALMASSEGGMDIEDVAARTPEKIRKLFVDPSTGVKAVEADGLARDIGFS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L  NLY+AF   D SL EINPL + ++GR+  LD+K +FD NAL+R  +I 
Sbjct: 171 GKLLPQVRTLVQNLYQAFDACDASLAEINPLALTRDGRVLALDAKFNFDPNALFRQPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EED  E+EA + +LSYIAL+G+IGC+VNGAGLAMATMD IKLYGG+PANFLDVG
Sbjct: 231 AMRDLDEEDPAEVEASKFDLSYIALEGDIGCLVNGAGLAMATMDAIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +++ IL+NIFGGIM+CDV+ +G+++A +EV++ +PLV+R++
Sbjct: 291 GGATAEKVTEAFKLMLRNPNLRAILVNIFGGIMKCDVIARGVVAAAREVQLAVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N  +G  ++ +SGL +I+A D+ +AA  +V A +
Sbjct: 351 GTNESLGKTILGQSGLRIISADDMAEAAGLVVAAAR 386


>gi|326435989|gb|EGD81559.1| Suclg2 protein [Salpingoeca sp. ATCC 50818]
          Length = 420

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 182/386 (47%), Positives = 253/386 (65%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L++K+ V V +     +   AE   + L    YV+K+Q+HAGGRGKG F 
Sbjct: 23  LNLHEYQSKGLMQKHGVTVQRFRFAETPEQAEEGARDLAAREYVLKAQVHAGGRGKGTFS 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ +  K V     ++LG  L+TKQT P G  V+ + V +  DI RE Y 
Sbjct: 83  ---SGLQGGVKLTTDPKQVKEYASQMLGYKLVTKQTPPDGVLVSKLMVAEALDIARETYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS +GG+DIEEVA   P+ IFK  ID + GVT E +  L   L  +
Sbjct: 140 AILMDRDSNGPVMVASPEGGVDIEEVAAKTPELIFKEPIDIVKGVTEEQLDRLAINLRFE 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ   D  +    LY+ F   D + +EINP     +G++   D+KI+FDDNA +R  +I 
Sbjct: 200 GQQFHDAKEQMRKLYELFLAVDATQVEINPFAETPDGQVVCFDAKINFDDNAAFRQQEIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED R++EA +H L+YI +DGNI C+VNGAGLAMATMDIIKL+GG PANFLD G
Sbjct: 260 AMRDTTEEDPRDVEADKHGLNYIGMDGNIACLVNGAGLAMATMDIIKLHGGEPANFLDCG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +D V +AFK++T D  V+ IL+NIFGGI+ C  +  GI+SA K V++ +PLV+RLE
Sbjct: 320 GGVTEDMVTSAFKLLTGDKQVEAILVNIFGGIVNCATIANGIVSACKNVELQVPLVVRLE 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+   +++ ESGL +ITA DLDD
Sbjct: 380 GTNVEKARQVLKESGLPIITATDLDD 405


>gi|240123378|ref|ZP_04736334.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268682003|ref|ZP_06148865.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268622287|gb|EEZ54687.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID332]
          Length = 388

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 194/396 (48%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKVGGV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
           ++    +    V  SL          +G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 61  KVVNSREKAKEVAESL----------IGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+G IGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGKIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|292490720|ref|YP_003526159.1| succinyl-CoA synthetase subunit beta [Nitrosococcus halophilus Nc4]
 gi|291579315|gb|ADE13772.1| succinyl-CoA synthetase, beta subunit [Nitrosococcus halophilus
           Nc4]
          Length = 389

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 181/386 (46%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK L   Y +PV  G    +   A +  + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MILHEFQAKRLFADYGIPVPPGGPAETAEEAGAQARELGGERWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV SSL+ +     ++LG+ L+T QT  TG  V  + +E  A + RE YL
Sbjct: 58  -------GGVRVVSSLEELSEVGAQLLGTRLVTAQTDATGLPVKTLLIEQPAAVAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  VDR    V  + S++GG+DIE+VA ++P +I +L+I+P++G+       +   L L 
Sbjct: 111 ATTVDRQLKRVVIMVSSRGGVDIEQVAAEHPGEILQLVINPIMGLQPYQCREVGFALGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+ R     +   +Y+ F ++D +L+E+NPL++ + G L  LD+K+  DDNA +RH   +
Sbjct: 171 GEQRRQLSQIMEKMYQLFREQDGNLVEMNPLVVTEQGNLLALDAKVILDDNAFFRHPAWE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA+ H LSYIAL+G I CMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ALRDPTQEDPKEVEARAHGLSYIALEGEIACMVNGAGLAMATMDLIKLQGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D+VA AFK+I +D  VK IL+NIFGGI+RCD++ +GI+ AV+EV I +P+V+RLE
Sbjct: 291 GTATADRVAEAFKLILADGKVKSILVNIFGGIVRCDLIAEGIIQAVQEVAIQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+ +SG+N+ITA DL D
Sbjct: 351 GTNAKQGRTLLQDSGMNLITADDLTD 376


>gi|37525386|ref|NP_928730.1| succinyl-CoA synthetase subunit beta [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|81419923|sp|Q7N6V5|SUCC_PHOLL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|36784813|emb|CAE13725.1| succinyl-CoA synthetase beta chain [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 192/396 (48%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPLIG  S     L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLIGPMSYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFLGLANLFLERDLALVEINPLVITTQGDLICLDGKLGADGNALFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +A+SGLN+I A  L DAA++ V AV+
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAKQAVAAVE 386


>gi|53718418|ref|YP_107404.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           K96243]
 gi|53724721|ref|YP_102101.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei ATCC
           23344]
 gi|67639769|ref|ZP_00438604.1| succinyl-CoA synthetase beta chain [Burkholderia mallei GB8 horse
           4]
 gi|76811595|ref|YP_332388.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           1710b]
 gi|121600535|ref|YP_993971.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei SAVP1]
 gi|124384843|ref|YP_001028362.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei NCTC
           10229]
 gi|126440736|ref|YP_001057864.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           668]
 gi|126448502|ref|YP_001079596.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei NCTC
           10247]
 gi|126451915|ref|YP_001065098.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           1106a]
 gi|134279463|ref|ZP_01766175.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           305]
 gi|166998883|ref|ZP_02264735.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei PRL-20]
 gi|167718279|ref|ZP_02401515.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           DM98]
 gi|167737327|ref|ZP_02410101.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei 14]
 gi|167814451|ref|ZP_02446131.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei 91]
 gi|167822916|ref|ZP_02454387.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei 9]
 gi|167844483|ref|ZP_02469991.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           B7210]
 gi|167893009|ref|ZP_02480411.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           7894]
 gi|167901473|ref|ZP_02488678.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909717|ref|ZP_02496808.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           112]
 gi|167917740|ref|ZP_02504831.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           BCC215]
 gi|217419521|ref|ZP_03451027.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           576]
 gi|226199413|ref|ZP_03794971.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811012|ref|YP_002895463.1| succinyl-CoA synthetase beta chain [Burkholderia pseudomallei
           MSHR346]
 gi|242314827|ref|ZP_04813843.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1106b]
 gi|254176800|ref|ZP_04883457.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei ATCC
           10399]
 gi|254187590|ref|ZP_04894102.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196178|ref|ZP_04902602.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           S13]
 gi|254203784|ref|ZP_04910144.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei FMH]
 gi|254208761|ref|ZP_04915109.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei JHU]
 gi|254259837|ref|ZP_04950891.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1710a]
 gi|254296289|ref|ZP_04963746.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           406e]
 gi|254360188|ref|ZP_04976458.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei
           2002721280]
 gi|81380303|sp|Q63WW2|SUCC_BURPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81605604|sp|Q62MG7|SUCC_BURMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123600135|sp|Q3JVL5|SUCC_BURP1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046894|sp|A3MH60|SUCC_BURM7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046895|sp|A2S8U3|SUCC_BURM9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046896|sp|A1V6W8|SUCC_BURMS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046897|sp|A3NRX7|SUCC_BURP0 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046898|sp|A3N693|SUCC_BURP6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52208832|emb|CAH34771.1| succinyl-CoA synthetase beta chain [Burkholderia pseudomallei
           K96243]
 gi|52428144|gb|AAU48737.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei ATCC
           23344]
 gi|76581048|gb|ABA50523.1| succinyl-CoA synthase, beta subunit [Burkholderia pseudomallei
           1710b]
 gi|121229345|gb|ABM51863.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei SAVP1]
 gi|124292863|gb|ABN02132.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei NCTC
           10229]
 gi|126220229|gb|ABN83735.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           668]
 gi|126225557|gb|ABN89097.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1106a]
 gi|126241372|gb|ABO04465.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei NCTC
           10247]
 gi|134248663|gb|EBA48745.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           305]
 gi|147745296|gb|EDK52376.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei FMH]
 gi|147750637|gb|EDK57706.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei JHU]
 gi|148029428|gb|EDK87333.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei
           2002721280]
 gi|157806086|gb|EDO83256.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           406e]
 gi|157935270|gb|EDO90940.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160697841|gb|EDP87811.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei ATCC
           10399]
 gi|169652921|gb|EDS85614.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           S13]
 gi|217396825|gb|EEC36841.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           576]
 gi|225928489|gb|EEH24518.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504685|gb|ACQ97003.1| succinyl-CoA synthetase beta chain [Burkholderia pseudomallei
           MSHR346]
 gi|238520367|gb|EEP83828.1| succinyl-CoA synthetase beta chain [Burkholderia mallei GB8 horse
           4]
 gi|242138066|gb|EES24468.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1106b]
 gi|243064963|gb|EES47149.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei PRL-20]
 gi|254218526|gb|EET07910.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1710a]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAQELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSVGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|238797739|ref|ZP_04641233.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia mollaretii
           ATCC 43969]
 gi|238718380|gb|EEQ10202.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia mollaretii
           ATCC 43969]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACSTPREAEEAASKIGTGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|167561701|ref|ZP_02354617.1| succinyl-CoA synthetase subunit beta [Burkholderia oklahomensis
           EO147]
 gi|167568937|ref|ZP_02361811.1| succinyl-CoA synthetase subunit beta [Burkholderia oklahomensis
           C6786]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSLGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|257453548|ref|ZP_05618838.1| succinyl-CoA synthetase beta chain [Enhydrobacter aerosaccus SK60]
 gi|257449006|gb|EEV23959.1| succinyl-CoA synthetase beta chain [Enhydrobacter aerosaccus SK60]
          Length = 391

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 191/398 (47%), Positives = 267/398 (67%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK LL+ Y +PV +G++  +   A +A   + G     VVK+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKELLKSYGLPVQEGIIAKNGDEAAAAFDKMAGNAGAVVVKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV++  + +       E++G  L+T QT   G  VN V + ED   I  E
Sbjct: 60  ---------GGVKIAKTREEAKQIAEELIGKNLVTYQTDANGQPVNSVLIAEDMYPIATE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL  +VDR++  V F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L
Sbjct: 111 LYLGAVVDRSARRVVFMASTEGGVEIEKVAEETPEKILKVEVDPLVGLQPSQAREVAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+ +   +   L    YKAF + D +L EINPL + K+G L  +D+KI  D NALYR  
Sbjct: 171 GLKDKQINEFAKLMTGAYKAFTENDFALFEINPLAVRKSGELACVDAKIGIDSNALYRLP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            + E RD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFL
Sbjct: 231 KVAEQRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA +++V  AFK+I  D SV+G+LINIFGGI+RCD++ + I+ AVKEV + +P+V+
Sbjct: 291 DVGGGATKERVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG N + G +++ +SGL +I A  L +A QKIV AV
Sbjct: 351 RLEGNNAEKGAQILRDSGLKLIPAEGLSEAGQKIVDAV 388


>gi|294141504|ref|YP_003557482.1| succinyl-CoA synthase subunit beta [Shewanella violacea DSS12]
 gi|293327973|dbj|BAJ02704.1| succinyl-CoA synthase, beta subunit [Shewanella violacea DSS12]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 193/397 (48%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDAKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVDIETVAENTPELIHKAIIDPLTGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITTEGNIHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A S L++I A  L DAAQ++V A +G
Sbjct: 351 GTNAELGREVLAGSDLDIIAATSLTDAAQQVVKAAEG 387


>gi|238785860|ref|ZP_04629828.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia bercovieri
           ATCC 43970]
 gi|238713230|gb|EEQ05274.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia bercovieri
           ATCC 43970]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACSTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|115447367|ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group]
 gi|75261432|sp|Q6K9N6|SUCB_ORYSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|47847769|dbj|BAD21546.1| putative succinyl-CoA ligase (GDP-forming) beta-chain,
           mitochondrial precursor [Oryza sativa Japonica Group]
 gi|113536994|dbj|BAF09377.1| Os02g0621700 [Oryza sativa Japonica Group]
 gi|125540340|gb|EAY86735.1| hypothetical protein OsI_08117 [Oryza sativa Indica Group]
 gi|125582922|gb|EAZ23853.1| hypothetical protein OsJ_07569 [Oryza sativa Japonica Group]
 gi|215704850|dbj|BAG94878.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 422

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 190/396 (47%), Positives = 261/396 (65%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT-LPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SV   ++ +K   P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +  + +   S   ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 88  FK---SGLQGGVHIVKA-EEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ ID   G+T +D A + D L 
Sbjct: 144 YFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 PKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFAMRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419


>gi|322833841|ref|YP_004213868.1| succinyl-CoA synthetase subunit beta [Rahnella sp. Y9602]
 gi|321169042|gb|ADW74741.1| succinyl-CoA synthetase, beta subunit [Rahnella sp. Y9602]
          Length = 388

 Score =  359 bits (921), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFLRYGLPAPTGFACSTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT  +G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDASGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++   G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVQQFTKIFMGLANIFLERDLALIEINPLVVTTAGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDYSQEDARESQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L +AAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTNAAQQVVAAVEG 387


>gi|254181632|ref|ZP_04888229.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1655]
 gi|184212170|gb|EDU09213.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1655]
          Length = 388

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAQELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSVGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKALYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|157148044|ref|YP_001455363.1| hypothetical protein CKO_03851 [Citrobacter koseri ATCC BAA-895]
 gi|157085249|gb|ABV14927.1| hypothetical protein CKO_03851 [Citrobacter koseri ATCC BAA-895]
          Length = 389

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 189/399 (47%), Positives = 263/399 (65%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A +T+       V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQHITELPEAWRTISSENKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV+V +      +   ++LGS L+T QTG  G  V+ + V E+   + +E
Sbjct: 60  ---------GGVKVLTQFSQAETFAVQMLGSQLVTYQTGSEGQYVSRILVCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S++GG++IE+VA D P+KI K+ +DPL G+    V  L  +L
Sbjct: 111 LYFGVVVDRESQRVTFIVSSEGGVEIEKVAHDTPEKIDKVSVDPLTGIQPCHVRELFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+         L    +KAF + D +LLEINPL+I +NG     D+K++ DDNALYRH 
Sbjct: 171 GLEKTLYSGFSQLVNQAWKAFNELDFALLEINPLVICENGEFMCADAKVTLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQALRDETQEDERENQAAKLDLNYVALDGAIGCMVNGAGLAMATMDIIKLYGAQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SD  V+GIL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDKKVQGILVNIFGGIVRCDMIARAIIHALHEEQITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G +   G RL+AESGL V     LDDAA++I+  +K
Sbjct: 351 RLSGNHATEGQRLLAESGLAVEAVDSLDDAAKRIIALLK 389


>gi|326527793|dbj|BAJ88969.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 422

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 189/396 (47%), Positives = 259/396 (65%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT-LPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ K+ + V +G V+ SV   +  +K   P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKFGINVPRGAVVGSVQEVKEVLKNVFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +  + +       ++L   L+TKQTGP G  V  VY+ +   ++ E+
Sbjct: 88  FK---SGLKGGVHIVKA-EEAEGLAAKMLNQVLVTKQTGPQGKVVGKVYLCEKMSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA  +GG  IE++A+ +P KI K+ +D   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACAEGGTSIEDLAEKFPDKIVKVPVDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    +    LY+ FC  D ++LEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 PKTADRQSSIEQIKKLYELFCKTDCTMLEINPLAETADKKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419


>gi|87119164|ref|ZP_01075062.1| succinyl-CoA synthetase subunit beta [Marinomonas sp. MED121]
 gi|86165555|gb|EAQ66822.1| succinyl-CoA synthetase subunit beta [Marinomonas sp. MED121]
          Length = 388

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 187/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ G    +   A  A K + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGYACDTPEEAVEAAKKIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +     + +G  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTHEEIAEFTNQWIGKNLVTYQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG+DIE VA++ P+ I K +IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVDIETVAEETPELIHKAIIDPLVGAQPYQARELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L + F D D +LLEINPL+I + G +  LD KI+ D NA+YR   +Q
Sbjct: 171 PTQIKQFTKVFLGLSQMFHDFDFALLEINPLVITEEGNIHCLDGKINIDSNAVYRQKKMQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVQVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+S L++I A  L DAA ++V A +G
Sbjct: 351 GTNAELGREVLAKSDLDIIAASSLKDAAVQVVKAAEG 387


>gi|167835576|ref|ZP_02462459.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           MSMB43]
          Length = 388

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYADQILGMQLKTHQTGPEGQKVNRLLIEEGADIRKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSLGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|117620947|ref|YP_856460.1| succinyl-CoA synthetase beta chain [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|189046874|sp|A0KJK9|SUCC_AERHH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117562354|gb|ABK39302.1| succinyl-CoA synthetase beta chain [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 388

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 192/396 (48%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G   ++   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGYACATPQEAAEAADKIGGNTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   + +  +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA + P+ I K  +DPL+G        L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAHETPELIHKAALDPLVGPQPYQARELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L + F D D +LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GEQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 QMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSKVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G R +A+SGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLTDAAQQVVKAAE 386


>gi|330829377|ref|YP_004392329.1| succinyl-CoA ligase [ADP-forming] subunit beta [Aeromonas veronii
           B565]
 gi|328804513|gb|AEB49712.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Aeromonas veronii
           B565]
          Length = 388

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 258/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G   ++   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGYACATPQEAAEAADKIGGNTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +  +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE++A + P  I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVDIEKIAHETPHLIHKAAIDPLVGPQAYQARELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D +LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDNNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G   +AESGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGGIKLAESGLNIIAAKSLTDAAQQVVKAAE 386


>gi|162457428|ref|YP_001619795.1| succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce
           56']
 gi|189030214|sp|A9GD65|SUCC_SORC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161168010|emb|CAN99315.1| Succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce
           56']
          Length = 398

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 198/404 (49%), Positives = 261/404 (64%), Gaps = 18/404 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA------IKTLPGPLYVVKSQIHAGGR 54
           M IHEYQ K L  +Y VPV KG    +  A+E A      I     P+ VVK+QIHA   
Sbjct: 1   MKIHEYQGKQLFARYGVPVPKGE--PAFQASEVAPIADRLIAQTGNPVVVVKAQIHA--- 55

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                           +  S+  + +++  +ILG  L+TKQTGP G +V  +Y+E G DI
Sbjct: 56  ----GGRGKGGGVKVAKGGSAEATALAE--KILGMQLVTKQTGPEGQKVRRLYIEQGLDI 109

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            RELY ++LVDR    +A IAST+GGMDIEEVA   P+KI+KL IDP++G+       L 
Sbjct: 110 ARELYFAMLVDRERRRIAVIASTEGGMDIEEVAHSTPEKIYKLFIDPVLGLAPYQGRQLA 169

Query: 175 DMLELQG-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
             L L   + +     L  +LY  F  +D SLLEINPL++   G +  LD+K+SFDDNA 
Sbjct: 170 IALGLTAKETQRQFLKLVASLYACFTAEDCSLLEINPLVVTGAGDVFALDAKVSFDDNAE 229

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH D   +RDV EED  E++AK+  LSY++LDG+IGC+VNGAGLAMATMDII  YGG P
Sbjct: 230 FRHADWNGMRDVDEEDPVELQAKRAGLSYVSLDGDIGCLVNGAGLAMATMDIILHYGGKP 289

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA Q++V  AF+II     V+GI +NIFGGIMRCDV+  G+++A KE+ + +
Sbjct: 290 ANFLDVGGGASQEQVKTAFQIILRSERVRGIFVNIFGGIMRCDVVAAGVIAAAKELGLKV 349

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           PLV+RLEG NV+ G +L+ ESGL + +A  + D AQKIV A +G
Sbjct: 350 PLVVRLEGTNVEAGRKLLDESGLTIQSASSMADGAQKIVAATRG 393


>gi|116749138|ref|YP_845825.1| succinyl-CoA synthetase subunit beta [Syntrophobacter fumaroxidans
           MPOB]
 gi|189030223|sp|A0LIY8|SUCC_SYNFM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116698202|gb|ABK17390.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 388

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 199/398 (50%), Positives = 255/398 (64%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L +KY VP+ +G    +V  A++    L     VVK+QIHA         
Sbjct: 1   MKIHEYQAKQLFQKYGVPIPRGKAAFTVEEAKAVGAELGTFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V    + ILG TL+T QTGP G  V  + VE+G  I +ELYL
Sbjct: 52  -GGRGKGGGVKLAKSAAEVDQYAKGILGMTLVTHQTGPEGRLVKKLLVEEGLPIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L DR +  + F+AS  GGMDIEEVA   P+KI K+ IDPL+G        L   L L+
Sbjct: 111 SVLPDRGTSKIVFMASEAGGMDIEEVAAKTPEKIIKVFIDPLLGFKGFHANELAYGLNLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK   D D SL+EINPL++  + R+  LD KI+FDDNA+YRH DIQ
Sbjct: 171 PELIKQFNAMVAALYKLCTDYDCSLVEINPLVLTSDNRVIALDGKINFDDNAMYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           E RD+ EED  EIEA +  L+YI +  GNIG MVNGAGLAMATMDII+  G APANFLDV
Sbjct: 231 EYRDLDEEDPFEIEASKFELNYIKMPGGNIGNMVNGAGLAMATMDIIQQAGAAPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V   F+II +D +VKG+LINIFGGI+RCD L  G++ A K+V I +P+V+R+
Sbjct: 291 GGGASAEQVENGFRIILADPAVKGVLINIFGGILRCDRLANGVVEAAKKVGIRVPVVIRM 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV+ G  ++A+SGLN+I A D+ DAAQKI    KG
Sbjct: 351 EGTNVEQGREILAKSGLNLINAKDVADAAQKIAAVAKG 388


>gi|238793888|ref|ZP_04637508.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia intermedia
           ATCC 29909]
 gi|238726791|gb|EEQ18325.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia intermedia
           ATCC 29909]
          Length = 388

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 190/395 (48%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKNLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVTQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDKSQEDKREADAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|291616730|ref|YP_003519472.1| SucC [Pantoea ananatis LMG 20103]
 gi|291151760|gb|ADD76344.1| SucC [Pantoea ananatis LMG 20103]
 gi|327393156|dbj|BAK10578.1| succinyl-CoA synthetase beta chain SucC [Pantoea ananatis AJ13355]
          Length = 388

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVIFMASTEGGVEIEKVAEETPHLIHKMALDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLATMFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|161523833|ref|YP_001578845.1| succinyl-CoA synthetase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|189351405|ref|YP_001947033.1| succinyl-CoA synthetase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|226734931|sp|A9AFT3|SUCC_BURM1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|160341262|gb|ABX14348.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189335427|dbj|BAG44497.1| succinyl-CoA synthetase beta chain [Burkholderia multivorans ATCC
           17616]
          Length = 388

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|238757971|ref|ZP_04619152.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia aldovae
           ATCC 35236]
 gi|238703725|gb|EEP96261.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia aldovae
           ATCC 35236]
          Length = 388

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 191/395 (48%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKKLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G  S     L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQSYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVNQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED  E  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDKNEERAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|110638636|ref|YP_678845.1| succinyl-CoA synthetase subunit beta [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281317|gb|ABG59503.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Cytophaga hutchinsonii ATCC 33406]
          Length = 403

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 191/405 (47%), Positives = 261/405 (64%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQAK +L+KYNV + +G+   S  +A  A K L       ++VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQAKEILKKYNVKIGEGIYADSPESAVEAAKKLKEQTGTDIFVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-----EDG 111
           G+F         GV +  S   V     ++LG+TL+T QTGP+G  V+ + V     + G
Sbjct: 61  GKF---VGTEHRGVMIAKSYDEVKEKAAQMLGNTLVTIQTGPSGKVVSRLLVAADVYQKG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +ELYLS+L+DR +G    IAST+GGMDIEEVA   P  I K  +DP +G+      
Sbjct: 118 ASEPKELYLSMLLDRGTGQDVIIASTEGGMDIEEVAHSTPHLITKEFVDPAVGLQGFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   +  ++EINP++      +  +D+K+S DDN
Sbjct: 178 KIAFGLGLSGTAFKEMVTFVTRLYTAYKATNAEMIEINPVLKTSKDEILAVDAKVSIDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+   RDV+EED  E+EA + +L+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALFRHPDLAAYRDVTEEDPLEVEAAESHLNYVKLDGNVGCMVNGAGLAMATMDVIKLAGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F+II  D +VK ILIN+FGGI+RCD +  G++ A K +  
Sbjct: 298 EPANFLDVGGGANAKTVEAGFRIILKDPNVKAILINVFGGIVRCDRVANGVVEAYKNIGT 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           INIP+++RL+G N + G ++I ESGL V +A+ L DAA+ +  A+
Sbjct: 358 INIPIIVRLQGTNAEEGAKIINESGLKVRSAVILKDAAKLVTEAL 402


>gi|325294374|ref|YP_004280888.1| succinyl-CoA ligase (ADP-forming) subunit beta [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064822|gb|ADY72829.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 389

 Score =  358 bits (919), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 193/398 (48%), Positives = 259/398 (65%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK + +KY +PV  G+V+ +   AE A K L  P+ VVK+Q+HAGGRGK    
Sbjct: 1   MKIHEYQAKEIFKKYKLPVPNGIVVYNAQEAEEAAKELGTPVVVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       E++G+ L T Q  P G  +NCV VE G +I +E Y+
Sbjct: 58  -------GGVKLAKSPEEAGKIASEMIGNRLRTYQN-PEGLPINCVLVEAGVNIDKEFYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR       + S  GGM+IEE+AK  P+ I K  IDP IG+       +   + + 
Sbjct: 110 GLTLDREVSRPVLMVSAAGGMEIEEIAKTNPELIIKEHIDPAIGLLPYQARKIAYKVGIT 169

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +  +     +   L K + + D SL+EINPL+  K G    LD+KI FDDNAL+RH DI
Sbjct: 170 DKNLLSQFVKIAMTLSKMYFELDASLIEINPLVQTKEGEFICLDAKIDFDDNALFRHKDI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           QEL D ++ D  E+EAK+ +L+Y+ LDGNIGCMVNGAGLAMATMD IK YGG PANFLDV
Sbjct: 230 QELEDTTQIDPLELEAKKWDLNYVKLDGNIGCMVNGAGLAMATMDTIKYYGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A  ++VAAAFK++ SD +VK I +NIFGGI+RCD +  GI+ A K+V+++ PL++RL
Sbjct: 290 GGTATVERVAAAFKLLLSDPNVKAIFVNIFGGIVRCDRIAGGIIEAAKQVELDRPLIVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV++G +++ ESGLN+I A D+ D AQK V A KG
Sbjct: 350 EGTNVELGRKMLEESGLNIIPAKDMADGAQKAVKAAKG 387


>gi|294460503|gb|ADE75828.1| unknown [Picea sitchensis]
          Length = 425

 Score =  358 bits (919), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 192/388 (49%), Positives = 257/388 (66%), Gaps = 6/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ  +L+ KY V V KG+V+SSV   + AI+   PG    VVKSQ+ AGGRG G 
Sbjct: 31  LNIHEYQGASLMSKYGVNVPKGIVVSSVAEVKQAIRDAFPGEKEVVVKSQVLAGGRGLGT 90

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV + + +        ++LG  LIT+QTGP G  VN VY+     +  E+
Sbjct: 91  FKN---GFEGGVHI-AKIDEAEDIAAKMLGQILITRQTGPEGKPVNKVYICQKLSLANEM 146

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR S     I+ ++GG  IE++A+ YP  I K+ ID   G+T ED A + + L 
Sbjct: 147 YFAITLDRVSAGPVIISCSKGGTSIEDLAEKYPDMIIKVPIDIFKGITDEDAAKVVEGLA 206

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    D    LY  F + D +LLEINP+    +G+L   D+K++FDDNA YR  D
Sbjct: 207 PRLADRDASIDQIKKLYGLFRETDCTLLEINPIAETVDGQLVAADAKMNFDDNAAYRQKD 266

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I   RD S+ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 267 IFSFRDKSQEDPREVSAAEADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 326

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V++ +P+V+R
Sbjct: 327 VGGNASEGQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVVVR 386

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NVD+G  ++ ESGL +ITA +LDD
Sbjct: 387 LEGTNVDLGKSILKESGLALITAENLDD 414


>gi|170693427|ref|ZP_02884586.1| succinyl-CoA synthetase, beta subunit [Burkholderia graminis C4D1M]
 gi|170141582|gb|EDT09751.1| succinyl-CoA synthetase, beta subunit [Burkholderia graminis C4D1M]
          Length = 389

 Score =  358 bits (919), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|317050499|ref|YP_004111615.1| succinyl-CoA synthetase subunit beta [Desulfurispirillum indicum
           S5]
 gi|316945583|gb|ADU65059.1| succinyl-CoA synthetase, beta subunit [Desulfurispirillum indicum
           S5]
          Length = 389

 Score =  358 bits (919), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 257/397 (64%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K L  +Y +PV KG V  +   AE   ++L G   VVK QIHAG RG     
Sbjct: 1   MNIHEYQGKELFEQYGIPVPKGKVAYTNWQAEDITRSLGGK-SVVKVQIHAGNRG----- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                + GGV++ SS K           + + T QTG    +V  + VE+   I +E YL
Sbjct: 55  -----ASGGVKLVSSSKEAKDLAEHFFNTPIKTAQTGGKSKQVRRILVEEQRVINKEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR    +A IAST+GG++IEEVA+ +P+KI    I+  IG+    +  L   L L 
Sbjct: 110 SMIVDREERRIAIIASTEGGVNIEEVAEQHPEKILMEHIELSIGILDFQIRKLAFSLGLA 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LYK F +KD S +EINPLI+  +G L  LD+K++FD+NAL RH +I 
Sbjct: 170 GEQIRQFSTIVKGLYKLFTEKDCSQIEINPLIVTDDGSLLALDAKVNFDENALMRHPEIL 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED  E+EA ++NLSYIALDG IGCMVNGAGLAMATMDII+ YGG PANFLDVG
Sbjct: 230 ELRDFAEEDPLEVEASRYNLSYIALDGTIGCMVNGAGLAMATMDIIQHYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +KV+ AF II  D  VK IL+NIFGGIM+CD++ +G++ A K + + +P+++RL 
Sbjct: 290 GGANTEKVSNAFSIILRDEKVKAILVNIFGGIMKCDIIAQGVVEAAKTMDVKVPIIIRLA 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N++ G ++I +SG N+I A  L++AA+  V   +G
Sbjct: 350 GTNLEEGMKVIEQSGQNLIVAKTLEEAAKLAVEKARG 386


>gi|221211337|ref|ZP_03584316.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD1]
 gi|221168698|gb|EEE01166.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD1]
          Length = 388

 Score =  358 bits (919), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|206559349|ref|YP_002230110.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia
           J2315]
 gi|226734930|sp|B4EBY6|SUCC_BURCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|198035387|emb|CAR51263.1| succinyl-CoA synthetase beta chain [Burkholderia cenocepacia J2315]
          Length = 388

 Score =  358 bits (919), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|260767661|ref|ZP_05876596.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio furnissii CIP
           102972]
 gi|260617170|gb|EEX42354.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio furnissii CIP
           102972]
 gi|315179507|gb|ADT86421.1| succinyl-CoA synthetase subunit beta [Vibrio furnissii NCTC 11218]
          Length = 388

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 261/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL++   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGQMFAQYDLALLEINPLVVTGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A+SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRDVLAKSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|85058856|ref|YP_454558.1| succinyl-CoA synthetase subunit beta [Sodalis glossinidius str.
           'morsitans']
 gi|123519751|sp|Q2NUM2|SUCC_SODGM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|84779376|dbj|BAE74153.1| succinyl-CoA synthase beta subunit [Sodalis glossinidius str.
           'morsitans']
          Length = 388

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 196/398 (49%), Positives = 266/398 (66%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV-HAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQAK L  +Y +P   G   +++  A ESA K   GP +VVK Q+HAGGRGK   
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACNTLREAEESASKIGAGP-WVVKCQVHAGGRGK--- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV+V    + + +   + LG  L+T QT   G  VN + VE   DI +ELY
Sbjct: 57  -------SGGVKVVKLKEEIRAFAEQWLGKRLVTYQTDALGQPVNQILVEVATDIAKELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L ++VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L
Sbjct: 110 LGVVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +F  L   F ++D++L+EINPL+I   G L  LD K+S D NAL+R  ++
Sbjct: 170 SGKQVSQFSKIFMGLATLFLERDLALVEINPLVITGAGDLICLDGKLSADGNALFRQPEL 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDV
Sbjct: 230 REMRDHSQEDEREAHATQLELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RL
Sbjct: 290 GGGATKERVTEAFKIILSDEKVKAVLVNIFGGIVRCDLIADGIIGAVSEVGVSVPVVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 350 EGNNAELGAKRLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|311746758|ref|ZP_07720543.1| succinyl-CoA synthase, beta subunit [Algoriphagus sp. PR1]
 gi|126578437|gb|EAZ82601.1| succinyl-CoA synthase, beta subunit [Algoriphagus sp. PR1]
          Length = 404

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 192/407 (47%), Positives = 266/407 (65%), Gaps = 13/407 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAA-ESAIK---TLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQAK +L+ Y V +  G+V  +  AA E+A+K         YV+K+QIHAGGRGK
Sbjct: 1   MNIHEYQAKEVLKGYGVRIQNGIVADNPEAAHEAAVKLNAETGTSWYVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G+ ++  ++   GV +   L+ V    + ILG TL+T QTGP G  VN + V +     G
Sbjct: 61  GKIQQTGSN---GVVLAKKLEDVADKAKAILGGTLVTHQTGPEGKVVNKILVAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E YLS+L+DR  G    +AST+GGMDIE+VA++ P+KI K  IDP +G+    + 
Sbjct: 118 DSEPKEYYLSILLDRAQGCNVIMASTEGGMDIEDVAENSPEKIIKEWIDPKVGLQGFQIR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S  EINP++   + ++  +D+K++ DDN
Sbjct: 178 KVAFKLGLTGTAFKEMVKFIAALYKAYEGTDSSQFEINPVLKTSDDKILAVDAKVNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ +LRD+SEED  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALYRHKDLADLRDLSEEDPLEVEAGKSGLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F+II  D +VK ILIN+FGGI+RCD +  G++ A K +  
Sbjct: 298 EPANFLDVGGGANATTVEAGFRIILQDPNVKAILINVFGGIVRCDRIANGVVEAYKSIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           I +P+++RL+G N   G ++I ESGL V +AI L +AA K+   ++G
Sbjct: 358 IRVPIIVRLQGTNAVEGAKIIDESGLKVASAITLKEAADKVQAVLQG 404


>gi|221200155|ref|ZP_03573198.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2M]
 gi|221206692|ref|ZP_03579704.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2]
 gi|221173347|gb|EEE05782.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2]
 gi|221180394|gb|EEE12798.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2M]
          Length = 388

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|269139927|ref|YP_003296628.1| succinyl-CoA synthetase subunit beta [Edwardsiella tarda EIB202]
 gi|267985588|gb|ACY85417.1| succinyl-CoA synthetase subunit beta [Edwardsiella tarda EIB202]
 gi|304559762|gb|ADM42426.1| Succinyl-CoA ligase [ADP-forming] beta chain [Edwardsiella tarda
           FL6-60]
          Length = 388

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 186/397 (46%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPTPVGYACSTPRQAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   S +++ +   + LG  L+T QT   G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKCVESKEAIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEGATEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEQVAQKTPHLIHRVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G +F  L   F   D+++ EINPL+I   G L  LD K+  D NAL+R   ++
Sbjct: 171 GKQAQQFGQIFMGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPALR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D  + D+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMEDPEQNDAREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  V+ +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEHVRAVLVNIFGGIVRCDLIADGIIGAVAEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R++A+SGLN+I A  L DAA+++V AV+G
Sbjct: 351 GNNAELGTRILADSGLNIIAATSLTDAARQVVSAVEG 387


>gi|90021748|ref|YP_527575.1| succinyl-CoA synthetase subunit beta [Saccharophagus degradans
           2-40]
 gi|123396049|sp|Q21IW6|SUCC_SACD2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89951348|gb|ABD81363.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Saccharophagus
           degradans 2-40]
          Length = 388

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 194/397 (48%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +   A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIAAETPAEAAAAADIIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   +    ++ LG+ LIT QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVSSKAEIEEFAKKWLGNNLITYQTDENGQPVSRILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+KI K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F DKD++LLEINPL+I   G L  LD+K++ D NA+YR   ++
Sbjct: 171 PVQIKQFTQIFLGLAKMFVDKDLALLEINPLVITDEGNLHCLDAKVAIDGNAMYRQPALK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVVEAFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAA ++V A +G
Sbjct: 351 GNNAELGAKVLADSGLNIIAAESLTDAAVQVVKAAEG 387


>gi|254447516|ref|ZP_05060982.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           HTCC5015]
 gi|198262859|gb|EDY87138.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           HTCC5015]
          Length = 387

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 193/386 (50%), Positives = 259/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+KAL + Y VPV +  V+S       A+  L     VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKALFQSYGVPVPQHRVVSDADDVARAVSELGSSRVVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+K      R +LGS L+T QT   G  VN V VE  +DI  ELYL
Sbjct: 58  -------GGVKVVDSVKEATEAARAMLGSRLVTFQTDEDGQPVNQVLVEMPSDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V  +AST+GG++IEEVA+  P+KI K  I+PL G+       L   L LQ
Sbjct: 111 GAVLDRASQRVVVMASTEGGVNIEEVAEKTPEKILKAEINPLTGLMPYQARELAFGLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   L + F +KD+SL+E+NPL+I   G L  LD KI+ D+NALYRH D+ 
Sbjct: 171 GDQIKQFGKIVGGLARLFVEKDLSLIEVNPLVITSEGDLVCLDGKINIDENALYRHADLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED RE  AK+  L+Y+AL+GNIGCMVNGAGLAMATMD++KL+GG PANFLDVG
Sbjct: 231 DLRDASQEDDRENRAKEWELNYVALEGNIGCMVNGAGLAMATMDLVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V+ +L+NIFGGI+RCD++ +GI++AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVQAVLVNIFGGIVRCDLIAEGIIAAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G+ L+ +S  N++ A  L D
Sbjct: 351 GNNAERGSELLNQSSFNILAAESLTD 376


>gi|332160920|ref|YP_004297497.1| succinyl-CoA synthetase subunit beta [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318604825|emb|CBY26323.1| succinyl-CoA ligase [ADP-forming] beta chain [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665150|gb|ADZ41794.1| succinyl-CoA synthetase subunit beta [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330862915|emb|CBX73050.1| succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           enterocolitica W22703]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKVALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDKSQEDEREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|254490920|ref|ZP_05104102.1| succinyl-CoA synthetase, beta subunit subfamily [Methylophaga
           thiooxidans DMS010]
 gi|224463829|gb|EEF80096.1| succinyl-CoA synthetase, beta subunit subfamily [Methylophaga
           thiooxydans DMS010]
          Length = 390

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 180/386 (46%), Positives = 253/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  +Y VP  +G V++    A  A + L G  +VVK+Q+H GGRGK    
Sbjct: 1   MNLHEFQAKQLFNRYGVPTPQGQVVTEAAQARQAAELLAGERWVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V + L  V +    +LG  L+T QT   G  ++ V VE   DI RE+YL
Sbjct: 58  -------GGVKVVNQLDEVETAASAMLGQHLVTHQTTAEGLPIHQVLVEKPTDIAREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+S  + F+ S QGGMDIE VA++ P+ I  L +DP++G+           L L 
Sbjct: 111 AVLLDRSSQRIVFMISAQGGMDIEAVAEESPEAILNLYVDPIVGLQGYQCRRAGFFLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      +  +LY+ F + D SL+EINPL++   G L  +D+KI+ DDN L+RH D+ 
Sbjct: 171 GAAFKQLQQVMQSLYQLFTENDASLVEINPLVVTGEGDLLAVDAKINLDDNGLFRHADLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++ED  E+ A+++ L+YI+LDGN+ CMVNGAGLAMATMD+I+  GG PANFLDVG
Sbjct: 231 EMFDPTQEDDAEVIAREYGLNYISLDGNVACMVNGAGLAMATMDLIQKEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   D+VA AFK+I SD+ VK IL+NIFGGI+RCD++ +GI+ A KEV + +P+V+RLE
Sbjct: 291 GGTTADRVAEAFKLILSDTKVKSILVNIFGGIVRCDLIAEGIIQAAKEVDLTLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G  L+A S +++  A DL D
Sbjct: 351 GTNAEQGRELLANSQMSIYAAQDLTD 376


>gi|238920747|ref|YP_002934262.1| succinyl-CoA synthetase subunit beta [Edwardsiella ictaluri 93-146]
 gi|259511781|sp|C5BEM7|SUCC_EDWI9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|238870316|gb|ACR70027.1| succinyl-CoA synthetase beta chain [Edwardsiella ictaluri 93-146]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 189/398 (47%), Positives = 261/398 (65%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS-VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQAK L  +Y +P  +G   S+   A E+A K   GP +VVK Q+HAGGRGK   
Sbjct: 1   MNLHEYQAKQLFAQYGLPTPEGYACSTPCQAEEAASKIGSGP-WVVKCQVHAGGRGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV+   S +++ +   + LG  L+T QT   G  V  + VE   +I RELY
Sbjct: 58  --------GGVKCVESKEAIHAFAEQWLGKRLVTYQTDAHGQPVRQILVEGATEIARELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  ++DR+S  V F+AST+GG++IE+VA+  P  I ++ +DPL G        L   L L
Sbjct: 110 LGAVIDRSSRRVVFMASTEGGVEIEQVAQKTPHLIHRVALDPLTGPQPYQGRELAFKLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+     G +F  L   F   D+++ EINPL+I   G L  LD K+  D NAL+R   +
Sbjct: 170 SGKQAQQFGQIFLGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPTL 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E+ D ++ D+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDV
Sbjct: 230 LEMEDPAQNDAREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII SD  V+ +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RL
Sbjct: 290 GGGATKERVTEAFKIILSDEHVRAVLVNIFGGIVRCDLIADGIIGAVAEVGVHVPVVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N ++G R++A+SGLN+I A  L DAA+++V AV+G
Sbjct: 350 EGNNAELGTRILADSGLNIIAATSLTDAARQVVSAVEG 387


>gi|107023585|ref|YP_621912.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia AU
           1054]
 gi|116690669|ref|YP_836292.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia
           HI2424]
 gi|170734013|ref|YP_001765960.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia
           MC0-3]
 gi|254247313|ref|ZP_04940634.1| Succinyl-CoA synthetase, beta subunit [Burkholderia cenocepacia
           PC184]
 gi|123244727|sp|Q1BTW6|SUCC_BURCA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046893|sp|A0KA72|SUCC_BURCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734929|sp|B1JY14|SUCC_BURCC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|105893774|gb|ABF76939.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           cenocepacia AU 1054]
 gi|116648758|gb|ABK09399.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           cenocepacia HI2424]
 gi|124872089|gb|EAY63805.1| Succinyl-CoA synthetase, beta subunit [Burkholderia cenocepacia
           PC184]
 gi|169817255|gb|ACA91838.1| succinyl-CoA synthetase, beta subunit [Burkholderia cenocepacia
           MC0-3]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|238752118|ref|ZP_04613601.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia rohdei
           ATCC 43380]
 gi|238709695|gb|EEQ01930.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia rohdei
           ATCC 43380]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATMFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|170726192|ref|YP_001760218.1| succinyl-CoA synthetase subunit beta [Shewanella woodyi ATCC 51908]
 gi|226734990|sp|B1KPH0|SUCC_SHEWM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169811539|gb|ACA86123.1| succinyl-CoA synthetase, beta subunit [Shewanella woodyi ATCC
           51908]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 255/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V      + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKNEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLAGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NALYR   I+
Sbjct: 171 PTQLKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNADLGREVLANSDLDIIAATSLTDAAEQVVKAAEG 387


>gi|291279313|ref|YP_003496148.1| succinyl-CoA synthase subunit beta [Deferribacter desulfuricans
           SSM1]
 gi|290754015|dbj|BAI80392.1| succinyl-CoA synthase, beta subunit [Deferribacter desulfuricans
           SSM1]
          Length = 393

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 188/399 (47%), Positives = 258/399 (64%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MNIHE+QAK + RKY VP  +G V      A  A + L G L  +VVK+QIHAGGRGK  
Sbjct: 1   MNIHEHQAKEIFRKYGVPTPRGFVAFKPENAVKAAQQLGGDLDVWVVKAQIHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  S + V    +++LGS L+T QTGP G  V+ +Y+E+G +I +E 
Sbjct: 60  ---------GGVKLARSTEEVGLIAKQMLGSKLVTHQTGPEGKVVHRIYIEEGVNIEKEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL +++DR+  M   +AS++GG++IEEVA   P+KI K+ I+P IG        L   L 
Sbjct: 111 YLGMVLDRSLEMPVMMASSEGGVEIEEVAARSPEKIIKVAINPTIGFQGFHGRKLAFGLG 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L  +           +Y  + D D +L+EINPL++ K G+   LD+K+SFDDNALYR  +
Sbjct: 171 LPRELVNKFISFAQAIYNVYMDYDANLIEINPLVLTKEGKFIALDAKMSFDDNALYRQPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD++EE+  EIEA ++ LSY+ LDGN+GCMVNGAGLAMATMDIIK  GG PANFLD
Sbjct: 231 ILAMRDLTEEEPTEIEAAKYGLSYVKLDGNVGCMVNGAGLAMATMDIIKHEGGRPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + VA  F+II  D +VK I +NIFGGI+RCD +  GI+ A K  ++N+P+V+R
Sbjct: 291 VGGGASAETVAKGFEIILRDPNVKSIFVNIFGGIVRCDRVANGIIEATKATQVNVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           L+G N +    ++  SG+  +I A DL D A+K V A +
Sbjct: 351 LDGTNAEEAAEILNNSGIKQLIAATDLKDGARKAVEAAE 389


>gi|304395709|ref|ZP_07377592.1| succinyl-CoA synthetase, beta subunit [Pantoea sp. aB]
 gi|308186073|ref|YP_003930204.1| Succinyl-CoA synthetase, beta subunit [Pantoea vagans C9-1]
 gi|304357003|gb|EFM21367.1| succinyl-CoA synthetase, beta subunit [Pantoea sp. aB]
 gi|308056583|gb|ADO08755.1| Succinyl-CoA synthetase, beta subunit [Pantoea vagans C9-1]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVIFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKLVGQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|83721087|ref|YP_441202.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           E264]
 gi|167579959|ref|ZP_02372833.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           TXDOH]
 gi|167621352|ref|ZP_02389983.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           Bt4]
 gi|257140132|ref|ZP_05588394.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           E264]
 gi|123537945|sp|Q2T0U7|SUCC_BURTA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83654912|gb|ABC38975.1| succinyl-CoA synthase, beta subunit [Burkholderia thailandensis
           E264]
          Length = 388

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 259/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYANQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P  G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSTGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|255036495|ref|YP_003087116.1| succinyl-CoA synthetase subunit beta [Dyadobacter fermentans DSM
           18053]
 gi|254949251|gb|ACT93951.1| succinyl-CoA synthetase, beta subunit [Dyadobacter fermentans DSM
           18053]
          Length = 407

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 189/401 (47%), Positives = 260/401 (64%), Gaps = 13/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K++L+KY V + +G+V  +    V  A    +      YVVKSQIHAGGRGK
Sbjct: 1   MNIHEYQGKSVLKKYGVRIQEGLVADTPDKAVEVARELSQQTGTKWYVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           GR   +    + GV +  S++ V +    ILG  L+T QTG  G RVN V + +     G
Sbjct: 61  GR---IVGSEQRGVALAKSVEDVRTISNNILGKVLVTHQTGAEGKRVNKVLIAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E YLS+L+DR       +AST+GGMDIEEVA+  P+KI K  IDP +G+      
Sbjct: 118 PSEPKEYYLSILLDRGRNCNVIMASTEGGMDIEEVAERTPEKIIKEWIDPKVGLQPFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G A  +       LY+A+ + D S+ EINP++   + ++  +D+K+  DDN
Sbjct: 178 KVAFALGLEGDAFKEMVKFISALYRAYAESDSSMFEINPVLKTSDNKILAVDAKVDLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH ++ E+RD +EED  E+EA  +NL+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALYRHPELAEMRDTNEEDPLEVEAGANNLNYVKLDGNVGCMVNGAGLAMATMDLIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F+II  D +VK ILINIFGGI+RCD +  G++ A K + +
Sbjct: 298 EPANFLDVGGGANARTVEAGFRIILKDPNVKAILINIFGGIVRCDRVAAGVVEAYKAIGE 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N + G R+I ESGL V +AI+  +AA K+
Sbjct: 358 IPVPIIVRLQGTNAEEGARIINESGLKVYSAIEFKEAAAKV 398


>gi|21593189|gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
          Length = 421

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 194/398 (48%), Positives = 262/398 (65%), Gaps = 8/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV  SS+   + AI+   P     VVKSQI AGGRG G 
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGT 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK   +  KGGV +    +    +I  ++LG  L+TKQTGP G  V+ VY+ +   ++ E
Sbjct: 87  FK---SGLKGGVHIVK--RDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNE 141

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y S+++DR S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L
Sbjct: 142 MYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGL 201

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +   R D  +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  
Sbjct: 202 APKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQK 261

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 262 EVFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFL 321

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+
Sbjct: 322 DVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVV 381

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            LEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 382 SLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKAL 419


>gi|330818197|ref|YP_004361902.1| succinyl-CoA synthetase subunit beta [Burkholderia gladioli BSR3]
 gi|327370590|gb|AEA61946.1| succinyl-CoA synthetase subunit beta [Burkholderia gladioli BSR3]
          Length = 388

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 259/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVEDAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + VE+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYASQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I +++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHQVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLGVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|134296851|ref|YP_001120586.1| succinyl-CoA synthetase subunit beta [Burkholderia vietnamiensis
           G4]
 gi|189046899|sp|A4JHJ8|SUCC_BURVG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|134140008|gb|ABO55751.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           vietnamiensis G4]
          Length = 388

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 182/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKTIEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARTILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|195953300|ref|YP_002121590.1| succinyl-CoA synthetase, beta subunit [Hydrogenobaculum sp.
           Y04AAS1]
 gi|226734959|sp|B4U901|SUCC_HYDS0 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|195932912|gb|ACG57612.1| succinyl-CoA synthetase, beta subunit [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 382

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 187/392 (47%), Positives = 260/392 (66%), Gaps = 14/392 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+Q+K LL+KY +PV +G    +V  A+ A + L G   VVK+QIH G RGK    
Sbjct: 1   MKLHEHQSKELLKKYGLPVPEGYAAFNVKEAKEAAQALGGYPLVVKAQIHCGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + + +    ILG  L T Q  P G  V+ + +E    I +E YL
Sbjct: 58  -------GGVKIVKSDEELEAFSEAILGKILKTVQC-PNGKVVSRLLIEKATPIEKEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++  +  +AS +GGM+IEE++K+ P  I K  +DP++G+       L   L L 
Sbjct: 110 SITLDRSNSKILIMASKEGGMEIEELSKEKPDAIIKEYVDPVLGIMPYQTRKLSFALGLN 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                  G +   LY+A+ D D SLLEINPL++ K+G + +LD+K+  DDNA +RH DI+
Sbjct: 170 PSLF---GKIVSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAFRHKDIE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D+++ D  E+EAK++ L+YI L+GNIGCMVNGAGLAM TMDIIKL GGAPANFLDVG
Sbjct: 227 ELEDITQIDPLEVEAKKYGLNYIKLEGNIGCMVNGAGLAMTTMDIIKLAGGAPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +++A AF+I+TSD +VK + INIFGGI+RCD L  G++ A K V I IP+V+RLE
Sbjct: 287 GGASVEQIANAFRILTSDENVKAVFINIFGGILRCDRLANGLIEAAKIVNIKIPVVVRLE 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV+ G +L+ ESGLN  +A+D+ D AQK +
Sbjct: 347 GTNVEEGRKLLKESGLNFESAVDMWDGAQKAI 378


>gi|30249768|ref|NP_841838.1| succinyl-CoA synthetase subunit beta [Nitrosomonas europaea ATCC
           19718]
 gi|30180805|emb|CAD85721.1| ATP-citrate lyase/succinyl-CoA ligases:ATP-grasp domain
           [Nitrosomonas europaea ATCC 19718]
          Length = 390

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/394 (45%), Positives = 259/394 (65%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L +Y + +A+G +  +V  A    + + G ++VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILAEYGIKLAEGGLAHTVEEAVQRSREIDGNVWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + + +      +LG  L+T QTGP G   + +Y+E G +I RE+YL
Sbjct: 58  -------GGVKVCRTHEEIEVAAESLLGKKLVTHQTGPAGKLCSRLYIEAGTEIAREVYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR+   +  + S QGGMDIE +A   P  I K+ I+P +G+      ++   L L+
Sbjct: 111 AFMIDRSHERIVMVGSAQGGMDIETLAATNPDAIKKIHIEPAVGLQDFQARTMAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+A  D D ++LEINPL++ +N  L  LD+K+SFD+NAL+R   I 
Sbjct: 171 DVLLNHAVKTIRGCYRAMRDLDANILEINPLVVTRNNELIALDAKMSFDENALFRRHRIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ DSREI A +  LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDNSQIDSREIAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D++VK +L+NIF GI RCD + +G++ AV+ + + +PLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADNNVKAMLVNIFAGINRCDWIAEGVVQAVRNIGMTVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G R+IA+SGL +ITA  L DAA+K+VHA
Sbjct: 351 GTNVEEGRRIIADSGLPIITAETLADAAEKVVHA 384


>gi|300715880|ref|YP_003740683.1| succinyl-CoA synthetase beta chain [Erwinia billingiae Eb661]
 gi|299061716|emb|CAX58832.1| Succinyl-CoA synthetase beta chain [Erwinia billingiae Eb661]
          Length = 388

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLTTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPHLIHQMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K++ D NAL+R  +++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLTADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAQAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|78067445|ref|YP_370214.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. 383]
 gi|123567721|sp|Q39D96|SUCC_BURS3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77968190|gb|ABB09570.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           sp. 383]
          Length = 388

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + VE+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR +  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVTQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|238790489|ref|ZP_04634258.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238721433|gb|EEQ13104.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 388

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATMFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|148266009|ref|YP_001232715.1| succinyl-CoA synthetase subunit beta [Geobacter uraniireducens Rf4]
 gi|146399509|gb|ABQ28142.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           uraniireducens Rf4]
          Length = 387

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 186/393 (47%), Positives = 256/393 (65%), Gaps = 11/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSSFGIPVPRGRVALTSDQVERAAKEMGGRC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +++    L+T QTGP G RV  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQELGKDLFTRKLVTPQTGPEGLRVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR S     IAS +GG++IEEVA+  P+KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRESSRYCLIASAEGGVEIEEVAQKSPEKIHMLTIDPFTGLRPYQARKIALALGLA 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLY+   +KD  L+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVELILNLYRLCLEKDCYLVEINPLVVTRAGWLMAMDAKINFDDNAMFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMLDYSQLDTLEINAGKYDLSYIKLQGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCALPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G+ V+ G +L+ +SGLNV    +L D A +IV 
Sbjct: 350 GSKVEEGKKLLLDSGLNVQIGENLGDGAARIVQ 382


>gi|328771096|gb|EGF81136.1| hypothetical protein BATDEDRAFT_34749 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 457

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/388 (47%), Positives = 254/388 (65%), Gaps = 3/388 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  LL +Y +   +G V  +   AE   K L     V+K+Q+ AGGRGKG F+
Sbjct: 48  LSIHEHLSMGLLNQYGIKTPRGYVAKTSAEAEKCAKDLATNDLVIKAQVLAGGRGKGHFE 107

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV+V  S   +     ++LG+ LITKQTG  G   N VY+ +   + RE Y 
Sbjct: 108 ---SGLKGGVKVVYSATDIKGLAEKMLGNKLITKQTGAGGRICNAVYIVERLYVRREFYF 164

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +     IAS+QGGMDIE VA + P+ I    +D  +G+   D   +   +   
Sbjct: 165 AIVMDRATQGPVIIASSQGGMDIETVAAETPEAIVTHPVDINVGLQLADATRIAKQIGFD 224

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       + F NLYK F +KD +++EINPL  ++NG +  +D+K  FDDNA +R  DI 
Sbjct: 225 GTGATKAAETFMNLYKLFIEKDSTMIEINPLAEIQNGDVMCMDAKFGFDDNADFRQKDIF 284

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED+RE+ A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 285 ALRDTTQEDAREVAAAKWNLNYIGLDGNIGCLVNGAGLAMATMDIIKLNGGDPANFLDVG 344

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D+VA AFKII+SD  V  IL+NIFGGIMRCDV+ +GI++AVK++ + +PL++RL+
Sbjct: 345 GSARADQVAEAFKIISSDPHVSAILVNIFGGIMRCDVIAEGIIAAVKQLGLKLPLIVRLQ 404

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAA 388
           G  VD   +LI ESGL + +  DLD+AA
Sbjct: 405 GTQVDAAKKLIDESGLRMYSIDDLDEAA 432


>gi|294637432|ref|ZP_06715723.1| succinyl-CoA ligase [ADP-forming] subunit beta [Edwardsiella tarda
           ATCC 23685]
 gi|291089425|gb|EFE21986.1| succinyl-CoA ligase [ADP-forming] subunit beta [Edwardsiella tarda
           ATCC 23685]
          Length = 388

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 186/397 (46%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPTPVGYACSTPRQAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +  + + +   + LG  L+T QT   G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKCVARKEEIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEGATEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEQVAQQTPHLIHRVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G +F  L   F   D+++ EINPL+I   G L  LD K+  D NAL+R   ++
Sbjct: 171 GKQAQQFGQIFLGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPALR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D  + D+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMEDPEQNDAREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEHVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R++A+SGLN+I A  L DAA+++V AV+G
Sbjct: 351 GNNAELGTRILADSGLNIIAATSLTDAARQVVAAVEG 387


>gi|328953556|ref|YP_004370890.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453880|gb|AEB09709.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Desulfobacca
           acetoxidans DSM 11109]
          Length = 385

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 193/391 (49%), Positives = 252/391 (64%), Gaps = 10/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L  K+ VP+ +G + ++ H A    + + G  +VVK+QIHAGG       
Sbjct: 1   MKIHEYQAKQLFEKFQVPIPQGGMATTAHEAYEIAEGIGGDSFVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  VI+   +ILG TL+T QTGP G  V  + VE   DI +ELYL
Sbjct: 54  ---RGKGGGVKVADSLSDVITLADQILGMTLVTHQTGPEGRLVKKILVEQALDIRQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DRT      + S  GGM+IEEVA   P+ I K  IDP +G+      +L   + L 
Sbjct: 111 GIVIDRTQARPVLMMSAAGGMEIEEVAARTPELIIKEAIDPAVGLQPFQTRNLVFGVGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       NLYK F   D SL+EINPL++  +G++  LD+K++FDDNAL+RH D+ 
Sbjct: 171 PMLLRTASGFINNLYKMFVAYDCSLVEINPLVVTTDGQMLALDAKVTFDDNALFRHKDLP 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +E D  E+EAK+HNL+YI LDG +G MVNGAGLAMATMD+IKL G  PANFLDVG
Sbjct: 231 PLEDPNEIDPLELEAKKHNLNYIRLDGTVGAMVNGAGLAMATMDLIKLAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D +A  F+II SD  VK ILINIFGGI+RCDVL +G++ A ++VK+ +P+++RLE
Sbjct: 291 GGASADMIANGFRIILSDPRVKAILINIFGGILRCDVLAEGVMEAARQVKVAVPIIIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G N DIG  L+  SGLN   A D+ DAAQK+
Sbjct: 351 GTNCDIGRNLLGASGLNFTVAGDMLDAAQKV 381


>gi|89095246|ref|ZP_01168168.1| succinyl-CoA synthetase subunit beta [Oceanospirillum sp. MED92]
 gi|89080500|gb|EAR59750.1| succinyl-CoA synthetase subunit beta [Oceanospirillum sp. MED92]
          Length = 388

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEAAEKIGGDKWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S           LG  L+T QT   G  V+ + VED  DI  ELYL
Sbjct: 58  -------GGVKLVDSPAEAQEFAANWLGKNLVTYQTDANGQPVSKILVEDCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI K  +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILKATVDPLTGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F +KD++LLEINPL+I + G L  LD+K++ D NA+YRH D+Q
Sbjct: 171 GDQIKQFVKIFLGLAQMFQEKDLALLEINPLVITEEGNLHCLDAKVAIDGNAVYRHKDLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED RE  A + +L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMEDPSQEDEREARAAEWDLNYVALDGSIGCMVNGAGLAMGTMDIVSLHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII  D  VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILEDDKVKAVLVNIFGGIVRCDLIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++L++ESGL++I A  L DAA + V A +G
Sbjct: 351 GNNAELGSQLLSESGLDIIAATSLTDAAVQAVKAAEG 387


>gi|123443156|ref|YP_001007130.1| succinyl-CoA synthetase subunit beta [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|189030227|sp|A1JRB6|SUCC_YERE8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122090117|emb|CAL12980.1| succinyl-CoA synthetase beta chain [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 388

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDVHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKVALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDKSQEDEREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|238765254|ref|ZP_04626183.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238696526|gb|EEP89314.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 388

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|71275180|ref|ZP_00651467.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Dixon]
 gi|71899818|ref|ZP_00681968.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|170731173|ref|YP_001776606.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa M12]
 gi|226735001|sp|B0U5F8|SUCC_XYLFM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71163989|gb|EAO13704.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Dixon]
 gi|71730409|gb|EAO32490.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|167965966|gb|ACA12976.1| Succinate--CoA ligase (ADP-forming) [Xylella fastidiosa M12]
          Length = 387

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 182/386 (47%), Positives = 258/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L  +Y +PV  G + SS   A +A K+L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V      +LG+ + T Q+      VN V V +  +I +ELYL
Sbjct: 58  -------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG+DIE VA + P+KI  L +D + G+       +   L L+
Sbjct: 111 SVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LY+ F DKD+SL+E+NPL I+ NG L  LD KI+ DDNA +RH ++ 
Sbjct: 171 AKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHKELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A +++L+Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S + VK I +NIFGGI+RCD++ +GI++AVKEV + +P+++RLE
Sbjct: 291 GGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NVD G +L+A SGL +I A D++D
Sbjct: 351 GTNVDAGKQLLATSGLAIIPADDIND 376


>gi|115352747|ref|YP_774586.1| succinyl-CoA synthetase subunit beta [Burkholderia ambifaria AMMD]
 gi|170703538|ref|ZP_02894293.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           IOP40-10]
 gi|171319344|ref|ZP_02908455.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           MEX-5]
 gi|172061611|ref|YP_001809263.1| succinyl-CoA synthetase subunit beta [Burkholderia ambifaria
           MC40-6]
 gi|122322312|sp|Q0BC71|SUCC_BURCM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734928|sp|B1YVY6|SUCC_BURA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115282735|gb|ABI88252.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           ambifaria AMMD]
 gi|170131550|gb|EDT00123.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           IOP40-10]
 gi|171095451|gb|EDT40421.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           MEX-5]
 gi|171994128|gb|ACB65047.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           MC40-6]
          Length = 388

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|124268441|ref|YP_001022445.1| malate--CoA ligase subunit beta [Methylibium petroleiphilum PM1]
 gi|124261216|gb|ABM96210.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylibium
           petroleiphilum PM1]
          Length = 389

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 183/396 (46%), Positives = 255/396 (64%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL  + VPV +G V  S   A  A   L G  + VK+QIH+GGRGK    
Sbjct: 1   MDIHEYQAKELLAGFGVPVPRGSVAYSADQAVYAATELGGWHWAVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V +  + +LG+TL+T QTGP G  VN +YVE      RELYL
Sbjct: 58  -------GGVKLCRTYQEVAAAAKAMLGATLVTYQTGPAGKVVNRLYVEQAEPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    +  IAS  GGM+IEE+A D P+ I ++ ++P +G+       +   L L 
Sbjct: 111 GFVLDRKIERIRVIASANGGMEIEEIAHDKPESILQIEVEPAVGLQPFQAREIAFGLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D +++EINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 171 IKQVSQAVTAIMGCYRAFRDLDATMVEINPLVVTKDQRVLALDAKMSFDDNALFRRRQIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RDV+EED RE  A QH L+Y+ L+G+IGC++NGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 EMRDVAEEDPREATANQHGLNYVGLEGDIGCIINGAGLAMATMDMIKYAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AF ++ SD +VK IL+NIF GI RCD + +G++ A K ++  +PL++RL 
Sbjct: 291 GGASPERVGQAFNLVLSDRNVKAILVNIFAGINRCDWVAQGVVQAAKGLR--VPLIVRLA 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++ E GL +ITA  L +AAQK V A +
Sbjct: 349 GTNVEEGQKIVRECGLPIITADSLAEAAQKAVQAAR 384


>gi|226945042|ref|YP_002800115.1| Succinyl-CoA synthetase subunit beta [Azotobacter vinelandii DJ]
 gi|259511776|sp|C1DM53|SUCC_AZOVD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226719969|gb|ACO79140.1| Succinyl-CoA synthetase, beta subunit [Azotobacter vinelandii DJ]
          Length = 389

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 186/396 (46%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++GV I +  AA  A   + G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSRGVAIDTPEAAAEACDRIGGDCWVAKVQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +         LG  L+T QT  +G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKLVKSREEAKVFAVNWLGKRLVTYQTDASGQPVGKILVEACTEIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVNIEQVAHETPEKILKASIDPLVGAQPFQARDLAFRLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+E+NPL++ K+G L  LD+KI+ D NAL+R   ++
Sbjct: 171 GDQLKQFTHIFIGLAKLFQEHDLALVEVNPLVVQKDGNLLCLDAKINLDTNALFRQPRLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE+ A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREVHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD+ VK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDAKVKAVLVNIFGGIVRCDMIAEGIIGAVREVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A SGLN+I A  L DAA ++V A +
Sbjct: 351 GNNAELGAEMLARSGLNIIPASTLTDAAVQVVKAAE 386


>gi|332141299|ref|YP_004427037.1| succinyl-CoA synthetase subunit beta [Alteromonas macleodii str.
           'Deep ecotype']
 gi|226734920|sp|B4RYG2|SUCC_ALTMD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|327551321|gb|AEA98039.1| succinyl-CoA synthetase subunit beta [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 388

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEYGLPVSEGYAADTAQGAVEAADRIGGEEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +     LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKNKDDIRAFAENWLGKNLVTFQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G        +   L L 
Sbjct: 111 GAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPYQAREMAFALGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  D NALYR   ++
Sbjct: 171 GVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGIDGNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D S+ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMQDPSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNAELGREVLANSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|238028530|ref|YP_002912761.1| succinyl-CoA synthetase subunit beta [Burkholderia glumae BGR1]
 gi|237877724|gb|ACR30057.1| Succinyl-CoA synthase, beta subunit [Burkholderia glumae BGR1]
          Length = 388

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 182/386 (47%), Positives = 258/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEALKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYASQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  +AS++GGMDIEEVA+  P+ + K+ ++P  G+   +   L   + + 
Sbjct: 111 GIVIDRVTQKVVVMASSEGGMDIEEVAEKTPEALHKVAVEPSKGLQDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +  NLYKAF + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQNLYKAFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLGVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|157375947|ref|YP_001474547.1| succinyl-CoA synthetase subunit beta [Shewanella sediminis HAW-EB3]
 gi|189030210|sp|A8FX46|SUCC_SHESH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157318321|gb|ABV37419.1| Succinate--CoA ligase (ADP-forming) [Shewanella sediminis HAW-EB3]
          Length = 388

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTPQEAVEAAGRIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQEKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNADLGRDVLASSDLDIIAATSLTDAAEQVVKAAEG 387


>gi|186475211|ref|YP_001856681.1| succinyl-CoA synthetase subunit beta [Burkholderia phymatum STM815]
 gi|184191670|gb|ACC69635.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
          Length = 389

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  V  +AS++GGMDIEEVA   P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKVVVMASSEGGMDIEEVAAKTPEAIHKVAVDPSKGLLDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKA  + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARTILQGLYKATWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVDLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|253990446|ref|YP_003041802.1| succinyl-CoA synthetase subunit beta [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211638987|emb|CAR67602.1| succinyl-coa synthetase, beta subunit (ec 6.2.1.5) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781896|emb|CAQ85060.1| succinyl-CoA synthetase, beta subunit [Photorhabdus asymbiotica]
          Length = 388

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 190/395 (48%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDAQGQPVHQILVEGATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLAGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQISQFTKIFLGLANLFLERDLALVEINPLVITTQGDLICLDGKLGADGNALFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAA++ V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAKQAVAAV 385


>gi|22126941|ref|NP_670364.1| succinyl-CoA synthetase subunit beta [Yersinia pestis KIM 10]
 gi|45440875|ref|NP_992414.1| succinyl-CoA synthetase subunit beta [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595493|ref|YP_069684.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           IP 32953]
 gi|108806590|ref|YP_650506.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Antiqua]
 gi|108813043|ref|YP_648810.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Nepal516]
 gi|145599847|ref|YP_001163923.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Pestoides F]
 gi|149366885|ref|ZP_01888919.1| succinyl-CoA synthetase beta chain [Yersinia pestis CA88-4125]
 gi|153947821|ref|YP_001401842.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421006|ref|YP_001605912.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Angola]
 gi|165924409|ref|ZP_02220241.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938347|ref|ZP_02226905.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011597|ref|ZP_02232495.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211256|ref|ZP_02237291.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400066|ref|ZP_02305584.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419494|ref|ZP_02311247.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424363|ref|ZP_02316116.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468938|ref|ZP_02333642.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis FV-1]
 gi|170025188|ref|YP_001721693.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           YPIII]
 gi|186894546|ref|YP_001871658.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928283|ref|YP_002346158.1| succinyl-CoA synthetase subunit beta [Yersinia pestis CO92]
 gi|229841051|ref|ZP_04461210.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843155|ref|ZP_04463301.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229893992|ref|ZP_04509178.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Pestoides A]
 gi|229903484|ref|ZP_04518597.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Nepal516]
 gi|270487265|ref|ZP_06204339.1| succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia pestis KIM
           D27]
 gi|294503122|ref|YP_003567184.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Z176003]
 gi|21264038|sp|Q8ZH00|SUCC_YERPE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417494|sp|Q66DA0|SUCC_YERPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122979766|sp|Q1CAG1|SUCC_YERPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122980014|sp|Q1CFM0|SUCC_YERPN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030228|sp|A7FKR4|SUCC_YERP3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030229|sp|A4TNT8|SUCC_YERPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735002|sp|B2K8F1|SUCC_YERPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735003|sp|A9R2F2|SUCC_YERPG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735004|sp|B1JG57|SUCC_YERPY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21959981|gb|AAM86615.1|AE013907_9 succinyl-CoA synthetase, beta subunit [Yersinia pestis KIM 10]
 gi|45435733|gb|AAS61291.1| succinyl-CoA synthetase beta chain [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588775|emb|CAH20389.1| succinyl-CoA synthetase beta chain [Yersinia pseudotuberculosis IP
           32953]
 gi|108776691|gb|ABG19210.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Yersinia pestis
           Nepal516]
 gi|108778503|gb|ABG12561.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Yersinia pestis
           Antiqua]
 gi|115346894|emb|CAL19781.1| succinyl-CoA synthetase beta chain [Yersinia pestis CO92]
 gi|145211543|gb|ABP40950.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Yersinia pestis
           Pestoides F]
 gi|149291259|gb|EDM41334.1| succinyl-CoA synthetase beta chain [Yersinia pestis CA88-4125]
 gi|152959316|gb|ABS46777.1| succinyl-CoA synthetase, beta subunit [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353821|gb|ABX87769.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Angola]
 gi|165913725|gb|EDR32344.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923469|gb|EDR40601.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989545|gb|EDR41846.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207027|gb|EDR51507.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962235|gb|EDR58256.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050774|gb|EDR62182.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057212|gb|EDR66975.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751722|gb|ACA69240.1| succinyl-CoA synthetase, beta subunit [Yersinia pseudotuberculosis
           YPIII]
 gi|186697572|gb|ACC88201.1| succinyl-CoA synthetase, beta subunit [Yersinia pseudotuberculosis
           PB1/+]
 gi|229679254|gb|EEO75357.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Nepal516]
 gi|229689502|gb|EEO81563.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697417|gb|EEO87464.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229703877|gb|EEO90890.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Pestoides A]
 gi|262361158|gb|ACY57879.1| succinyl-CoA synthetase subunit beta [Yersinia pestis D106004]
 gi|262365287|gb|ACY61844.1| succinyl-CoA synthetase subunit beta [Yersinia pestis D182038]
 gi|270335769|gb|EFA46546.1| succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia pestis KIM
           D27]
 gi|294353581|gb|ADE63922.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Z176003]
 gi|320014254|gb|ADV97825.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 388

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|224129596|ref|XP_002320625.1| predicted protein [Populus trichocarpa]
 gi|222861398|gb|EEE98940.1| predicted protein [Populus trichocarpa]
          Length = 421

 Score =  355 bits (912), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 190/388 (48%), Positives = 260/388 (67%), Gaps = 6/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV +SS+   + AI+   PG    VVKSQ+ AGGRG G+
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAVSSLDEVKKAIQDVFPGESELVVKSQVLAGGRGLGK 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +  + K +     ++LG  L+TKQTG  G  V+ VY+ +   ++ E+
Sbjct: 87  FKN---GFQGGVHIVKADK-IEETAGKMLGQILVTKQTGSQGKIVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++++DRTS     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 143 YFAIMLDRTSAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDAAKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R +  +    LYK FC+ D +LLEINP+    + +L   D+K++FDDNA +R  +
Sbjct: 203 PKVADRNNSIEQVKKLYKLFCECDCTLLEINPIAETSDKQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A   +L+YI LDG IGCMVNGAGLAMATMDI+KL+GG PANFLD
Sbjct: 263 IFALRDPTQEDPREVAAAMADLNYIGLDGEIGCMVNGAGLAMATMDIVKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 323 VGGNASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NVD G R++ ESG+ +ITA DLDD
Sbjct: 383 LEGTNVDQGKRILKESGMALITAEDLDD 410


>gi|148284072|ref|YP_001248162.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Boryong]
 gi|189081762|sp|A5CC52|SUCC_ORITB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146739511|emb|CAM79217.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Boryong]
          Length = 386

 Score =  355 bits (911), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 258/395 (65%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L KYNVP+  G+ I      + AI +L    +V+K+QIHAGGR  G   
Sbjct: 1   MNIHEYQAKEILSKYNVPIQPGIAILKYEDIDYAIDSLATDTFVIKAQIHAGGRKIGGGI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  D      +           + + G  L+T QTGP G +V  +Y+E  A I  ELYL
Sbjct: 61  KISNDKNEAKNLA----------KNMWGMNLVTPQTGPKGQKVQRIYIESAAKIKLELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR++  + F+AS+ GG++IEEVA   P KI K+ I+ L G+       +   L L 
Sbjct: 111 GAVIDRSNHCITFMASSAGGINIEEVAHTNPDKIIKVKINILTGIQPFHSRKIIFQLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y    + D + +EINPLII  + +L  LD+KI+FDD+AL+R   IQ
Sbjct: 171 GDLAKQMAKIMSAVYSMLINTDATQVEINPLIITLDDKLIALDAKINFDDSALFRQPLIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E+ A + +LSY+ ++GNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 GMRDEDEEDHLELRATKADLSYVRMNGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD+ +VA A KII+SD +VKGILINIFGGIMRCD++ +G+L+A KE+ ++IPLV+RL 
Sbjct: 291 GSADKKRVAEALKIISSDQNVKGILINIFGGIMRCDIIAEGVLAAAKEINLSIPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G  +++ S L ++ A DLDDAA+KIV AV
Sbjct: 351 GTNFELGKEILSNSKLQIVAANDLDDAARKIVEAV 385


>gi|239993691|ref|ZP_04714215.1| succinyl-CoA synthetase subunit beta [Alteromonas macleodii ATCC
           27126]
          Length = 388

 Score =  355 bits (911), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEYGLPVSEGYAADTAQGAVEAADRIGGNEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +     LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKNKDDIRAFAENWLGKNLVTFQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G        +   L L 
Sbjct: 111 GAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPYQAREMAFALGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  D NALYR   ++
Sbjct: 171 GVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGIDGNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D S+ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMQDPSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNAELGREVLANSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|114330621|ref|YP_746843.1| succinyl-CoA synthetase subunit beta [Nitrosomonas eutropha C91]
 gi|114307635|gb|ABI58878.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosomonas
           eutropha C91]
          Length = 390

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 177/394 (44%), Positives = 258/394 (65%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L +Y + +A+G +  SV  A    + +   ++VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILAEYGIKLAEGGLAYSVEEAVQRSREIGSNVWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G +++  S + + +    +LG  L+T QTGPTG   + +Y+E G DI RE+YL
Sbjct: 58  -------GAIKICRSHQEIETAAESLLGKKLVTHQTGPTGKLCSKLYIEAGTDIAREVYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L++DR+   +  + S QGGMDIE +A   P  I K+ I+P +G+      ++   L L 
Sbjct: 111 ALMIDRSHERIVMVGSAQGGMDIETLAVTNPGAIKKIHIEPAVGLQDFQARTMAFSLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+            Y+A  D D ++LEINPL++ +N  L  LD+K+SFD+NAL+R   + 
Sbjct: 171 GELLNHAIKTIRGCYRALRDLDANILEINPLVVTRNNELIALDAKMSFDENALFRRHRVS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ D RE+ A +  LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDNTQIDPREVAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +DS+VK +L+NIF GI RCD + +G++ AV+ +   +PLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADSNVKAMLVNIFAGINRCDWIAEGVVQAVRNIGTTVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G R+IA+SGL +ITA  L +AA+K VHA
Sbjct: 351 GTNVEEGRRIIADSGLPIITAETLAEAAEKAVHA 384


>gi|110678492|ref|YP_681499.1| malate--CoA ligase subunit beta [Roseobacter denitrificans OCh 114]
 gi|109454608|gb|ABG30813.1| malate-CoA ligase, beta subunit, putative [Roseobacter
           denitrificans OCh 114]
          Length = 399

 Score =  355 bits (910), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MDIHEYQAKEVLANFGVAVPDGALAYSPEQASYRARELGGERWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   +     E+ G  +IT QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCESDVEIQKASEEMFGKKMITHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  V  +AS +GGM+IEE+++  P+ I + +++P +G+       +   L + 
Sbjct: 111 GFVLDRTTQRVMIVASAEGGMEIEEISEKRPESIVRAIVEPAVGLREFQCRQIAFKLGVD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 AGLTQQMVRTLQGCYRAFTELDATMVEINPLVITADNRVIALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD SV+ IL+NIF GI RCD + +G++ A++EV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQALREVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAQSGLPIIRATTLMEAAERAVGAWQ 386


>gi|163735509|ref|ZP_02142941.1| succinyl-CoA synthetase subunit beta [Roseobacter litoralis Och
           149]
 gi|161391129|gb|EDQ15466.1| succinyl-CoA synthetase subunit beta [Roseobacter litoralis Och
           149]
          Length = 399

 Score =  355 bits (910), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 179/396 (45%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MDIHEYQAKEVLANFGVTVPDGALAYSPEQATYRARELGGERWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+   +      + G  +IT QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCSNDIEIQKASEGMFGQKMITHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  V  +AS +GGM+IEE+++  P+ I + +++P +G+       +   L + 
Sbjct: 111 GFVLDRTTQRVMIVASAEGGMEIEEISEKRPESIVRAIVEPAVGLREFQCRQIAFKLGVD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 AGLIQQMVRTLQGCYRAFTELDATMVEINPLVITTDNRVIALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD SV+ IL+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQAIKEVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L++AA++ V A K
Sbjct: 351 GTNVEEGQKILAQSGLPIIRAATLNEAAERAVGAWK 386


>gi|307823358|ref|ZP_07653587.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
 gi|307735343|gb|EFO06191.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
          Length = 397

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 177/394 (44%), Positives = 252/394 (63%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  Y V +A+G +  S   A    + + G ++ VK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILSGYGVKIAEGGMAYSPEEAVQRARDIGGHIWAVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V +    +LG  L+T QTGP G     +YVE G DI++E+Y 
Sbjct: 58  -------GGIKICKTHDEVEAAAEALLGKRLVTHQTGPVGKVCGRLYVEAGTDIVKEMYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR+S  +  + S QGGM+IEE+A++ P  I K+ I+P +G+       +   L L+
Sbjct: 111 CFLVDRSSERIVMVGSAQGGMEIEELAENNPDAITKIYIEPAVGLQDYQAREMAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+A  + D  +LEINPL++ ++  L  LD+K+ FDDNAL+R   I 
Sbjct: 171 PELLSHAVKTIRGCYRALRELDAGMLEINPLVVTRSNELVALDAKMGFDDNALFRQQKIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ED RE+ A    LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDKTQEDPREMAAADRGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D  VK +L+NIF GI RCD + +G++ AVK++ + IPL++RL 
Sbjct: 291 GGASAERTEKAFRLVLADKGVKAMLVNIFAGINRCDWIAEGVVEAVKKIDMKIPLIVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G R+IAESGL +ITA  L +AA+K V A
Sbjct: 351 GTNVEEGRRIIAESGLPIITAETLAEAAEKAVQA 384


>gi|119774566|ref|YP_927306.1| succinyl-CoA synthetase subunit beta [Shewanella amazonensis SB2B]
 gi|189081798|sp|A1S5I0|SUCC_SHEAM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119767066|gb|ABL99636.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           amazonensis SB2B]
          Length = 388

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGRIGGNMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +   + LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEKWLGKNLVTYQTDENGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDP+ G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPIAGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L + F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLAQMFLDHDFALLEINPLVITTEGNLHCLDGKIGVDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A  L DAAQ++V A +G
Sbjct: 351 GTNAELGAKVLAESGLDIIAAKSLTDAAQQVVKAAEG 387


>gi|268590346|ref|ZP_06124567.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rettgeri DSM 1131]
 gi|291314256|gb|EFE54709.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rettgeri DSM 1131]
          Length = 388

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/386 (49%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SSV     A K +    +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACSSVAETVDAAKKIGNGPWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S +  V +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVTSDINEVKAFAEHWLGKNLVTYQTDANGQPVNQILVETATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPMPFQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L EINPL+I   G L  LD K+  D NALYR  +I+
Sbjct: 171 GKQVSQFAKIFMGLATLFLERDLALAEINPLVISTAGDLVCLDGKLGIDSNALYRQPEIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 ELRDESQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAANSLTD 376


>gi|116622480|ref|YP_824636.1| succinyl-CoA synthetase subunit beta [Candidatus Solibacter
           usitatus Ellin6076]
 gi|122254101|sp|Q021N6|SUCC_SOLUE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116225642|gb|ABJ84351.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 384

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/392 (48%), Positives = 262/392 (66%), Gaps = 12/392 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKA+L +Y VPV +G V  +   AE+A KTL G + VVK+QIHAGGRGKG   
Sbjct: 1   MKIHEYQAKAILAQYKVPVPRGHVAYTEADAETAAKTLGGSV-VVKAQIHAGGRGKGGGV 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  D+   + +           ++ILG TL+T QTGP G  V  + +E+   I RELYL
Sbjct: 60  KVAKDAAEALELA----------KKILGMTLVTHQTGPEGRLVQRLLIEETLPIERELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR  G   F+AS+ GGMDIEEVA   P+ I K  ++   G++      L   + + 
Sbjct: 110 GIVLDRVQGKPVFMASSAGGMDIEEVAAKTPELILKETLE-YPGLSPYQARKLAFGIGIP 168

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          L KA+   D SL EINP I+  +G++  LD+KI+FDDNALYRH ++ 
Sbjct: 169 AASVNAAAAAMTALSKAYWAMDASLAEINPFILTTDGKVYALDAKITFDDNALYRHKELV 228

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+EA +H L+YI LDG +GCMVNGAGLAMATMDIIK  GG+PANFLDVG
Sbjct: 229 ELRDLNEEDPLEVEASKHGLNYIKLDGTVGCMVNGAGLAMATMDIIKFAGGSPANFLDVG 288

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ ++V  AF+I+ SD SVK +LINIFGGI+RCD L  G+++A +++ I +P+V+R+E
Sbjct: 289 GGANAEQVKNAFRILLSDHSVKAVLINIFGGILRCDTLATGVVAAARDLNIQVPIVVRME 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV+ G +++ ESG N     D+ DAAQK+V
Sbjct: 349 GTNVEAGRQILLESGFNFTVGADMWDAAQKVV 380


>gi|118595147|ref|ZP_01552494.1| succinyl-CoA synthase, beta subunit [Methylophilales bacterium
           HTCC2181]
 gi|118440925|gb|EAV47552.1| succinyl-CoA synthase, beta subunit [Methylophilales bacterium
           HTCC2181]
          Length = 389

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+ Y +   K VV S+   AE A++ L G  Y +K+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKNLLKIYGINTPKHVVASTTKEAELAVQMLKGNAYAIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ +         LG  L+T Q  P G  V+ V +E+   I +ELY 
Sbjct: 58  -------GGVKIISTAQEAQDFSEAWLGKNLVTYQNAPLGQPVHRVLIEETVTIKKELYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    +  I S+ GG +IE+++K  P+ I K+        + +DV+S+ D L+++
Sbjct: 111 SLLVDRQLEKITLIFSSAGGTEIEDISKKNPELILKISTSIQKEFSEQDVSSILDKLQMK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             + +    L  N +K F + D+SLLEINPL+I  +  L  LD K+S D NAL++H  I 
Sbjct: 171 ASSMLLFKSLIKNTFKLFTENDLSLLEINPLVITNDNDLVALDCKMSIDSNALFKHPHII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + +D S+ D +E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 DFQDWSQIDHKEAEAHHAGLNYIALEGNIGCMVNGAGLAMATMDLIKLSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D V+ AFKI+ SD  V+ +L+NIFGGIMRCD++  GI++A+KEV I IP+V+RLE
Sbjct: 291 GSATADTVSKAFKILLSDPKVRVVLVNIFGGIMRCDIIANGIIAAIKEVGIEIPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  ++ +S LN+I+A  L DAA + VH   G
Sbjct: 351 GTNVELGKEILNQSNLNIISAESLTDAATQSVHLASG 387


>gi|91793535|ref|YP_563186.1| succinyl-CoA synthetase subunit beta [Shewanella denitrificans
           OS217]
 gi|123356720|sp|Q12M63|SUCC_SHEDO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91715537|gb|ABE55463.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           denitrificans OS217]
          Length = 388

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V SS   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTSSKDEIRAFAENWLGKNLVTYQTDAKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG+DIE VA+  P+ I   +IDPL G  +     L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVDIETVAEHTPELIHTAIIDPLTGPQAYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLANMFNDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEG 387


>gi|225024311|ref|ZP_03713503.1| hypothetical protein EIKCOROL_01186 [Eikenella corrodens ATCC
           23834]
 gi|224942896|gb|EEG24105.1| hypothetical protein EIKCOROL_01186 [Eikenella corrodens ATCC
           23834]
          Length = 388

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 193/396 (48%), Positives = 267/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++ ++   A +A   L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAANGEEAAAAYDKLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S          ++G  L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSRDEAKQVAESLIGKNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+KIFK+++DPL+G+       +   L L
Sbjct: 111 LGAVVDRAARRVVFMASTEGGVEIEKVAEETPEKIFKVVVDPLVGLQPCQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       L    Y+AF + D +L EINPL + ++G L  +D+K+  D NALYR   I
Sbjct: 171 KDKQVGQFVKLMTGAYQAFIENDFALFEINPLSVREDGSLACVDAKVGIDGNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A +  L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFELNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|56416522|ref|YP_153596.1| succinyl-CoA synthetase beta chain [Anaplasma marginale str. St.
           Maries]
 gi|255002862|ref|ZP_05277826.1| succinyl-CoA synthetase subunit beta [Anaplasma marginale str.
           Puerto Rico]
 gi|77416576|sp|Q5PBI8|SUCC_ANAMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56387754|gb|AAV86341.1| succinyl-CoA synthetase beta chain [Anaplasma marginale str. St.
           Maries]
          Length = 388

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 264/396 (66%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  + V V +GVV+ SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKGVLSSFGVTVPRGVVVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S ++++L S LIT QT P G +VN VY+E+G DI +E Y+
Sbjct: 58  -------GGVKIGKTKDEVKSLVKQMLHSVLITHQTSPEGQKVNKVYLEEGVDIGKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DIE VAK+ P  +  + +DPL G  S     LC    L 
Sbjct: 111 SAVVDRSVGRVSIIFSSEGGVDIETVAKERPNMVSVVHVDPLYGFRSFHGQELCRRFGL- 169

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G  ++ G   +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I
Sbjct: 170 GPKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 230 AKLQDPDEYAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +++PLV+RL
Sbjct: 290 GGGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVDVPLVVRL 348

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 349 SGTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 384


>gi|320354457|ref|YP_004195796.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Desulfobulbus
           propionicus DSM 2032]
 gi|320122959|gb|ADW18505.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 385

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 191/395 (48%), Positives = 265/395 (67%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L RK+NVP  KG +  +    E   +    P+ VVK+Q+HAGGRGKG   
Sbjct: 1   MKIHEYQAKELFRKFNVPTPKGKLALTSDEVEKIAEEFGYPV-VVKAQVHAGGRGKGGGV 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +L A +K  V+        ++D   I+G TL+TKQTG  G +V  V VE+G +I +ELYL
Sbjct: 60  KL-AKTKADVKP-------VAD--SIIGMTLVTKQTGAQGKKVRKVLVEEGLNIKKELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  VA + S  GGMDIEEVA   P++I  + + P+ G        +C  LE++
Sbjct: 110 SIIPDRETATVAIVCSQDGGMDIEEVAAKTPERIITVNVSPITGFQPFHARKICFGLEIE 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     L  NLY+ F   D S++EINPLII   G +  LD+K+  D NA++RH D++
Sbjct: 170 KDLQKQMSALVKNLYELFMAYDCSMVEINPLIITAEGNILALDAKMDIDGNAMFRHPDVK 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EED  E EA Q  L+YI LDGN+G +VNGAGLAMATMDI+KL G +PANFLDVG
Sbjct: 230 EMRDIDEEDPVEAEAAQFGLNYINLDGNVGNIVNGAGLAMATMDIVKLAGASPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + +   F++I  D +VKGILIN+FGGI+RCD+L KG++ A  ++K+++P+V+R+E
Sbjct: 290 GGANAEAIENGFRLIMKDPAVKGILINVFGGILRCDILAKGVVQAATKLKLSVPVVVRME 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G R++AESGL++I A DL DAA+K+   V
Sbjct: 350 GTNVEEGRRILAESGLDLINAKDLADAAEKVAKIV 384


>gi|183598178|ref|ZP_02959671.1| hypothetical protein PROSTU_01557 [Providencia stuartii ATCC 25827]
 gi|188020345|gb|EDU58385.1| hypothetical protein PROSTU_01557 [Providencia stuartii ATCC 25827]
          Length = 388

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 192/387 (49%), Positives = 258/387 (66%), Gaps = 12/387 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV-HAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQAK L  +Y +P   G   SS   A E+A K   GP +VVK Q+HAGGRGK   
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPTGYACSSADEAVEAAKKIGNGP-WVVKCQVHAGGRGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV+V S++  +     + LG  L+T QT   G  VN + VE   DI +ELY
Sbjct: 58  --------GGVKVTSNINDIKEFAEKWLGKNLVTYQTDANGQPVNQILVEHATDIAKELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L
Sbjct: 110 LGAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAVIDPLTGPMPFQGRELAFKLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +F  L   F ++D++L+E+NPL+I   G L  LD K+  D NALYR  ++
Sbjct: 170 TGKQVSQFAKIFMGLATMFLERDLALIEVNPLVINTEGDLVCLDGKLGVDSNALYRQAEM 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+ D S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDV
Sbjct: 230 REMHDPSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII SD SVK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RL
Sbjct: 290 GGGATKERVTEAFKIILSDKSVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
           EG N ++G + +A+SGLN+I A  L D
Sbjct: 350 EGNNAELGAKKLADSGLNIIAANSLTD 376


>gi|226330945|ref|ZP_03806463.1| hypothetical protein PROPEN_04868 [Proteus penneri ATCC 35198]
 gi|225201740|gb|EEG84094.1| hypothetical protein PROPEN_04868 [Proteus penneri ATCC 35198]
          Length = 388

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 188/396 (47%), Positives = 261/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPAGFACTTPREAEEAASKIGQGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEQWLGKRLVTYQTDANGQPVTQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I + +IDPL G        L   L L+
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHRAIIDPLTGPMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K   L  LD K+  D NALYR  +++
Sbjct: 171 GKQVSQFAKIFMGLASIFLERDLALIEINPLVITKEDDLICLDGKLGVDSNALYRQPEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V  +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +A+SGLN+I A  L DAA+++V A +
Sbjct: 351 GNNAELGTKKLADSGLNIIAAKSLTDAAKQVVAAAE 386


>gi|251792225|ref|YP_003006946.1| succinyl-CoA synthetase subunit beta [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533613|gb|ACS96859.1| succinyl-CoA synthetase beta chain (SCS-beta) [Aggregatibacter
           aphrophilus NJ8700]
          Length = 389

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++P+ +G+   +V  A  AIK L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFTEYDLPICRGIACKTVDEAAEAIKQLKGGVWAAKCQVHAGGRGKVGGV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +L ++       E+ +++      + LG  L+T QT   G  +N +YVE+  +I RELYL
Sbjct: 61  KLVSN-------EAEVRAFAD---KWLGQRLVTFQTDANGQPINIIYVEETVNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS  GGMDIEE+A   P+ + K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRASQKVVFMASAAGGMDIEEMAVKTPELLHKVALDPLVGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F ++D+SLLEINPL++ K G+L  LD+KI  D NALYR LD+ 
Sbjct: 171 GDQINQFTHIFTQLAKMFVERDLSLLEINPLVVTKEGKLSCLDAKIVVDSNALYRQLDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+++ D+RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 TMHDITQSDAREALAELHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV +V +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNQVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAPLGREILANSGLNIIAAKTLTDAAVESVKAANG 387


>gi|290993522|ref|XP_002679382.1| succinate-CoA ligase (ADP-forming) [Naegleria gruberi]
 gi|284092998|gb|EFC46638.1| succinate-CoA ligase (ADP-forming) [Naegleria gruberi]
          Length = 441

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 182/393 (46%), Positives = 261/393 (66%), Gaps = 4/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-YVVKSQIHAGGRGKGRF 59
           +N+HEYQA+ L R Y++ V +G V++S    + A   L   + Y+VK+Q+ AGGRG+G+F
Sbjct: 31  LNLHEYQAQDLFRSYDISVPRGKVLTSATETKKACTELGNHVDYIVKAQVLAGGRGRGKF 90

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           K   +  KGGV+   S+      + ++LG  L+TKQTG  G   N VYV++     RELY
Sbjct: 91  K---SGLKGGVQKALSIGEAEDYVSKMLGQVLVTKQTGAEGKPCNKVYVQERLYARRELY 147

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++L+DR SG    I STQGGM IE+VA++ P++I  + I    G+       L   L  
Sbjct: 148 LAILLDRQSGGPVLIGSTQGGMAIEDVARESPEEIHTIPISVKEGLHKSQAEGLARKLGF 207

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +      D    LY  F   D  LLEINPLI   +G++   D+K++ DDNA +R  ++
Sbjct: 208 RDELLDQAVDQITKLYNLFMKTDSVLLEINPLIETADGKVICADAKVNIDDNAFFRQKEL 267

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D+++ED R++ A +++L+YI LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 268 FALKDITQEDPRDVRAAKYDLNYIGLDGNIGCIVNGAGLAMATMDIIKLYGGDPANFLDV 327

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA QD++  A KI+  D  V+ IL+NIFGGIMRCD++ +G+++A+KE ++  P+V+RL
Sbjct: 328 GGGASQDQIVEALKILNDDHHVQAILVNIFGGIMRCDLIAQGLINAMKETELRAPVVVRL 387

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +G NV     ++A+SG+ VI A +L+DAAQK V
Sbjct: 388 QGTNVQQAKDILAKSGIRVIPADNLEDAAQKAV 420


>gi|120598558|ref|YP_963132.1| succinyl-CoA synthetase subunit beta [Shewanella sp. W3-18-1]
 gi|146293363|ref|YP_001183787.1| succinyl-CoA synthetase subunit beta [Shewanella putrefaciens
           CN-32]
 gi|189030211|sp|A1RIT3|SUCC_SHESW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081805|sp|A4Y7Q5|SUCC_SHEPC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120558651|gb|ABM24578.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           W3-18-1]
 gi|145565053|gb|ABP75988.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           putrefaciens CN-32]
 gi|319426665|gb|ADV54739.1| succinyl-CoA synthetase, beta subunit [Shewanella putrefaciens 200]
          Length = 388

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   ++
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKVK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAERVVKAAEG 387


>gi|126174726|ref|YP_001050875.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS155]
 gi|153001025|ref|YP_001366706.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS185]
 gi|160875738|ref|YP_001555054.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS195]
 gi|217973015|ref|YP_002357766.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS223]
 gi|304409103|ref|ZP_07390724.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS183]
 gi|307303106|ref|ZP_07582861.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica BA175]
 gi|189081799|sp|A3D5J3|SUCC_SHEB5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081800|sp|A6WPA4|SUCC_SHEB8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081801|sp|A9L532|SUCC_SHEB9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778451|sp|B8E770|SUCC_SHEB2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|125997931|gb|ABN62006.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           baltica OS155]
 gi|151365643|gb|ABS08643.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS185]
 gi|160861260|gb|ABX49794.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS195]
 gi|217498150|gb|ACK46343.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS223]
 gi|304352924|gb|EFM17321.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS183]
 gi|306913466|gb|EFN43888.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica BA175]
 gi|315267927|gb|ADT94780.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS678]
          Length = 388

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I   +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEG 387


>gi|197284468|ref|YP_002150340.1| succinyl-CoA synthetase subunit beta [Proteus mirabilis HI4320]
 gi|227356646|ref|ZP_03841032.1| succinyl-CoA synthetase beta chain [Proteus mirabilis ATCC 29906]
 gi|226734973|sp|B4ESR1|SUCC_PROMH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|194681955|emb|CAR41369.1| succinyl-CoA synthetase beta chain [Proteus mirabilis HI4320]
 gi|227163154|gb|EEI48085.1| succinyl-CoA synthetase beta chain [Proteus mirabilis ATCC 29906]
          Length = 388

 Score =  352 bits (904), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 188/396 (47%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFSRYGLPAPAGFACSTPREAEEAASKIGQGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDANGQPVTQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I + +IDPL G        L   L L+
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHRAIIDPLTGPMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K+  L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFAKIFMGLATIFLERDLALIEINPLVITKDDDLICLDGKLGVDSNALFRQPEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V  +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +A+SGLN+I A  L DAA+++V A +
Sbjct: 351 GNNAELGTKKLADSGLNIIAAKSLTDAAKQVVAAAE 386


>gi|84393476|ref|ZP_00992232.1| succinyl-CoA synthetase subunit beta [Vibrio splendidus 12B01]
 gi|84375904|gb|EAP92795.1| succinyl-CoA synthetase subunit beta [Vibrio splendidus 12B01]
          Length = 388

 Score =  352 bits (904), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 185/396 (46%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRELAFKLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITNEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A+ L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAVSLTDAAQKVVAAAE 386


>gi|212712443|ref|ZP_03320571.1| hypothetical protein PROVALCAL_03537 [Providencia alcalifaciens DSM
           30120]
 gi|212684900|gb|EEB44428.1| hypothetical protein PROVALCAL_03537 [Providencia alcalifaciens DSM
           30120]
          Length = 388

 Score =  352 bits (904), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 192/390 (49%), Positives = 258/390 (66%), Gaps = 18/390 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SSV  A +A K +    +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPTGYACSSVEEAVAAAKKIGNGPWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREI----LGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                  GGV+V       I+DIRE     LG  L+T QT   G  VN + VE   DI +
Sbjct: 58  -------GGVKVTKD----INDIREFAEKWLGKNLVTYQTDANGQPVNQILVESATDIAK 106

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYL  +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   
Sbjct: 107 ELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAVIDPLTGPMPYQGRELAFK 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L G+       +F  L   F ++D++L+E+NPL+I   G L  LD K+  D NALYR 
Sbjct: 167 LGLTGKQVSQFAKIFMGLATMFLERDLALIEVNPLVINTEGDLVCLDGKLGVDSNALYRQ 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +++E+ D S+ED+RE +A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANF
Sbjct: 227 AEMREMHDPSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +++V  AFKII SD SVK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V
Sbjct: 287 LDVGGGATKERVTEAFKIILSDKSVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVV 346

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +RLEG N ++G + +A+SGLN+I A  L D
Sbjct: 347 VRLEGNNAELGAKKLADSGLNIIAANSLTD 376


>gi|312884954|ref|ZP_07744644.1| succinyl-CoA synthetase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367431|gb|EFP94993.1| succinyl-CoA synthetase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 388

 Score =  352 bits (903), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAAEAAGRITTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +    + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDDKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGDMFAKHDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++A S +++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRQVLANSDVDIIAAESLTDAAQKVVAAAEG 387


>gi|289549229|ref|YP_003474217.1| succinyl-CoA synthetase subunit beta [Thermocrinis albus DSM 14484]
 gi|289182846|gb|ADC90090.1| succinyl-CoA synthetase, beta subunit [Thermocrinis albus DSM
           14484]
          Length = 382

 Score =  352 bits (903), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 183/393 (46%), Positives = 255/393 (64%), Gaps = 14/393 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  +Y +PV KG V  SV  A+   + L     VVK+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKEIFGRYGLPVPKGGVAFSVEEAQRVAEELGSFPLVVKAQVHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ +   +  +LG  L T Q  P G  V+ V++E    I +E Y 
Sbjct: 58  -------GGVKLVHSMEELTQAVESMLGKVLKTFQC-PEGKPVSRVWIEKATPIKKEYYF 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     +AS +GGM+IEEVAK+ P  I  L +DP +G+       +   L L 
Sbjct: 110 SITLDRSAAKPVIMASAEGGMEIEEVAKEKPDAILMLHVDPALGLMPSQARKIAFRLGLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +    L  NLYK + D D SL+E+NPL++ + G L +LD+K+  DDNAL RH DIQ
Sbjct: 170 VDRFVP---LALNLYKLYMDLDASLVEVNPLVLTEEGDLVILDAKVDVDDNALMRHRDIQ 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D+++ D  E+EAK++ L+YI LDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 227 EMEDLTQLDPLEVEAKKYGLNYIKLDGNIGCMVNGAGLAMTTMDIIKLAGGNPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +++A AF+I+ +D +VK + INIFGGI+RCD L  G++ A K V I++P+V+R+E
Sbjct: 287 GGASVEQIANAFRILMADPNVKAVFINIFGGILRCDRLASGLIEAAKMVDISVPVVVRME 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+ G R++AESGL  +TA D+ D A+K V 
Sbjct: 347 GTNVEEGKRMLAESGLRFVTAEDMWDGARKAVE 379


>gi|157961614|ref|YP_001501648.1| succinyl-CoA synthetase subunit beta [Shewanella pealeana ATCC
           700345]
 gi|189081804|sp|A8H3H6|SUCC_SHEPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157846614|gb|ABV87113.1| succinyl-CoA synthetase, beta subunit [Shewanella pealeana ATCC
           700345]
          Length = 388

 Score =  352 bits (903), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNADLGREVLANSDLDIIAATSLTDAAEQVVKAAEG 387


>gi|261343502|ref|ZP_05971147.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rustigianii DSM 4541]
 gi|282568648|gb|EFB74183.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rustigianii DSM 4541]
          Length = 388

 Score =  352 bits (902), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 187/386 (48%), Positives = 254/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SSV  A +A K +    +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPTGYACSSVEEAVAAAKKIGNGPWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   +  +     + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVTKDINDISEFAEKWLGKNLVTYQTDANGQPVNQILVESATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLTGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+E+NPL+I   G L  LD K+  D NALYR  +++
Sbjct: 171 GKQVSQFAKIFMGLATMFLERDLALIEVNPLVINTEGDLICLDGKLGVDSNALYRQAEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SVK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDKSVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAANSLTD 376


>gi|117920159|ref|YP_869351.1| succinyl-CoA synthetase subunit beta [Shewanella sp. ANA-3]
 gi|189081806|sp|A0KVX6|SUCC_SHESA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117612491|gb|ABK47945.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           ANA-3]
          Length = 388

 Score =  352 bits (902), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQAKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAANSLTDAAEQVVKAAEG 387


>gi|114563512|ref|YP_751025.1| succinyl-CoA synthetase subunit beta [Shewanella frigidimarina
           NCIMB 400]
 gi|122299478|sp|Q080X8|SUCC_SHEFN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114334805|gb|ABI72187.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           frigidimarina NCIMB 400]
          Length = 388

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGNKDEIRAFAENWLGKNLVTYQTDAKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG+DIE VA+  P+ I   +IDPL G  +     L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVDIETVAEHTPELIHTAIIDPLTGPQAFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLANMFNDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEG 387


>gi|113969977|ref|YP_733770.1| succinyl-CoA synthetase subunit beta [Shewanella sp. MR-4]
 gi|114047212|ref|YP_737762.1| succinyl-CoA synthetase subunit beta [Shewanella sp. MR-7]
 gi|123029739|sp|Q0HJQ4|SUCC_SHESM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123326615|sp|Q0HW00|SUCC_SHESR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|113884661|gb|ABI38713.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           MR-4]
 gi|113888654|gb|ABI42705.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           MR-7]
          Length = 388

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAANSLTDAAEQVVKAAEG 387


>gi|222474890|ref|YP_002563305.1| succinyl-CoA synthetase beta chain (sucC) [Anaplasma marginale str.
           Florida]
 gi|222419026|gb|ACM49049.1| succinyl-CoA synthetase beta chain (sucC) [Anaplasma marginale str.
           Florida]
          Length = 399

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 197/396 (49%), Positives = 264/396 (66%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+QAK +L  + V V +GVV+ SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 12  VNVHEFQAKGVLSSFGVTVPRGVVVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S ++++L S LIT QT P G +VN VY+E+G DI +E Y+
Sbjct: 69  -------GGVKIGKTKDEVKSLVKQMLHSVLITHQTSPEGQKVNKVYLEEGVDIGKEYYI 121

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DIE VAK+ P  +  + +DPL G  S     LC    L 
Sbjct: 122 SAVVDRSVGRVSIIFSSEGGVDIETVAKERPNMVSVVHVDPLYGFRSFHGQELCRRFGL- 180

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G  ++ G   +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I
Sbjct: 181 GPKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEI 240

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 241 AKLQDPDEYAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDV 300

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +++PLV+RL
Sbjct: 301 GGGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVDVPLVVRL 359

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 360 SGTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 395


>gi|261252266|ref|ZP_05944839.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio orientalis CIP
           102891]
 gi|260935657|gb|EEX91646.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio orientalis CIP
           102891]
          Length = 388

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 188/396 (47%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTPQEAFEAAGRITTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG+DIE++A++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|313672318|ref|YP_004050429.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939074|gb|ADR18266.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 393

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/400 (47%), Positives = 254/400 (63%), Gaps = 13/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGR 58
           MNIHE+QAK + RKY VP  KG V      A    + L G   ++V+K+QIHAGGRGK  
Sbjct: 1   MNIHEHQAKEIFRKYGVPTPKGYVAFKAENAVKIAQQLGGEKEVWVIKAQIHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  S + V    + +LG TL+T QTGP G  V  +Y+E+G DI +E 
Sbjct: 60  ---------GGVKIARSTEEVGLIAKSLLGKTLVTHQTGPEGKVVRRIYIEEGLDIEKEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR   M   IAS++GGM+IEEVA   P+KI ++ +DPLIG        L   L 
Sbjct: 111 YLSILLDRAKEMPVIIASSEGGMEIEEVAAKSPEKIVRIHLDPLIGFQPFHARKLAFALN 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L  +      +    LYK + D D  L+EINPLI   + +   LD+K+SFD+NAL+R  +
Sbjct: 171 LPREEVNRFVNFVQALYKVYEDYDAELVEINPLIRTTDKKFIALDAKVSFDNNALFRQPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            Q +RD++EE+  EIEA  +NLSY+ LDGN+GCMVNGAGLAMATMDIIK  GG PANFLD
Sbjct: 231 AQAMRDLTEEEPTEIEASNYNLSYVKLDGNVGCMVNGAGLAMATMDIIKHEGGNPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + VA  F+II  D +VK I +NIFGGI+RC+ +  GI+ A K  ++ +P+V+R
Sbjct: 291 VGGGATAETVAKGFEIILRDPNVKSIFVNIFGGIVRCERVANGIVEAAKVTEVRVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           L+G N +    ++   G+ N+I A D+ D A K V A KG
Sbjct: 351 LDGTNAEEAAEILKNCGIKNIIPAKDMKDGAVKAVKAAKG 390


>gi|156548216|ref|XP_001608018.1| PREDICTED: similar to succinyl-coa synthetase beta chain [Nasonia
           vitripennis]
          Length = 441

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 184/398 (46%), Positives = 261/398 (65%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLR   V V    ++  +    +A++TL    YVVK+Q+ AGGRGKG F 
Sbjct: 31  LNLLEYQSKELLRDSGVSVQNFAIVDDLQKTPNALETLHAEEYVVKAQVLAGGRGKGWFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++    K+V   ++ +LG  LITKQT   G  V  + + +  DI RE Y+
Sbjct: 91  N---GFKGGVKITKDKKAVAEYVKSMLGHRLITKQTSKDGILVQKIMIAESVDITRETYV 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR+      IAS  GGMDIE VA+  P++I  + +D   G+  E    + + L  +
Sbjct: 148 CILMDRSHNGPVLIASPAGGMDIEAVAEKTPEQIKTIPLDIYTGIDDEIAKEVAEFLGFK 207

Query: 181 GQARIDGGDLF--PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            + ++    ++   NL+K F D D   +EINPL+  K+G +  +D+KISFDDNA +R  D
Sbjct: 208 -EEKLKQKAVYELKNLWKLFVDIDALQVEINPLVETKDGEVVAVDAKISFDDNAEFRQKD 266

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I +L D SE+D RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 267 IFDLEDTSEKDPREVDASKFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGTPANFLD 326

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG   +D+V  AF+I+T D  V+ IL+N+FGGI+ C  + KGI+SA + + + IPLV+R
Sbjct: 327 VGGSVKEDQVYQAFRILTEDPKVQSILVNVFGGIVNCATIAKGIVSAARNLGLKIPLVVR 386

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NV+   ++IAESGL ++TA DLD+AA+K V ++K
Sbjct: 387 LEGTNVNEAKKIIAESGLPILTANDLDEAAKKAVASIK 424


>gi|88607855|ref|YP_505609.1| succinyl-CoA synthetase, beta subunit [Anaplasma phagocytophilum
           HZ]
 gi|123494534|sp|Q2GJ42|SUCC_ANAPZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|88598918|gb|ABD44388.1| succinyl-CoA synthetase, beta subunit [Anaplasma phagocytophilum
           HZ]
          Length = 388

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 187/395 (47%), Positives = 260/395 (65%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  ++V V KGVV+ SV   +SA+ +L   +  VK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKGILSGFDVRVPKGVVVRSVEEVDSALGSLAAGIVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V   ++ +LGS L+T QT   G +V+ VY+E+G  I +E YL
Sbjct: 58  -------GGVKIGKAREEVADLVKSMLGSVLVTHQTSAAGQKVHAVYLEEGVSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +GMV+ I S++GGMDIEEVA   P+ +  + +DP+ G        LC  L L+
Sbjct: 111 GAVVDRKAGMVSVIFSSEGGMDIEEVAHSRPEMVVVVNVDPVYGFLDFHGRKLCYGLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +  +    +   + +A  + D S +EINPL+    G    LD+K++FDDN L+R  +I 
Sbjct: 171 KEQVVQITAMARKVCRALMETDASQVEINPLVETTCGEFIALDAKMTFDDNGLFRRPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D  E    E+EA ++ LSYI LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 KLTDPHEYSEEELEAAKYGLSYIKLDGNIGCMVNGAGLAMATMDIVKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V  AFKII   S V GIL+NIFGGIMRCDV+  GI+ + KE+ +++P+V+RL 
Sbjct: 291 GGASKDTVREAFKIILR-SGVDGILVNIFGGIMRCDVIAAGIIESAKEIGVSVPMVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  IG  ++  SGL+++TA +LD+AA+ +V  V
Sbjct: 350 GTNYKIGKEMLDASGLSIVTAENLDEAARFVVDLV 384


>gi|149914671|ref|ZP_01903201.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
 gi|149811464|gb|EDM71299.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
          Length = 394

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL+++ V V +G +  S   A      L G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGERWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ S+ + +    + +LG  L+T QTGP G  V+ +YVE+  +I +E+YL
Sbjct: 58  -------GGVRICSTEEEIADAAQWMLGRKLVTHQTGPQGKLVSRLYVEEATNIAQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  +AS QGGM+IEE++ + P  I + ++DP +G+ +     +   L L+
Sbjct: 111 GLVMDRKLERVVVVASAQGGMEIEEISANEPDSIIRSVVDPAVGMQAFQAREIAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y    + D +++E+NP+++ ++G +  LD+KISFDDNAL+R  +I 
Sbjct: 171 PPMIAQAVKTILGCYALMSEMDANMVEVNPMVVTRSGEIVALDAKISFDDNALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED+RE  A+   LSYI LDG IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDTRETFAEDRGLSYIGLDGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  +FK + +D +V+ IL+NIF GI RCD + +G++ A++E+++++P+V+RL 
Sbjct: 291 GGASPDRVLMSFKAVLNDPNVEAILVNIFAGINRCDWIAEGVVRAMRELELHMPVVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++AESGL VI A  L DAA K+V A K
Sbjct: 351 GTNVEEGRKILAESGLAVIPAETLADAADKVVGAWK 386


>gi|254509030|ref|ZP_05121135.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus 16]
 gi|323495096|ref|ZP_08100183.1| succinyl-CoA synthetase subunit beta [Vibrio brasiliensis LMG
           20546]
 gi|323498617|ref|ZP_08103609.1| succinyl-CoA synthetase subunit beta [Vibrio sinaloensis DSM 21326]
 gi|219548065|gb|EED25085.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus 16]
 gi|323310647|gb|EGA63824.1| succinyl-CoA synthetase subunit beta [Vibrio brasiliensis LMG
           20546]
 gi|323316315|gb|EGA69334.1| succinyl-CoA synthetase subunit beta [Vibrio sinaloensis DSM 21326]
          Length = 388

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGNMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S +++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAEG 387


>gi|328473393|gb|EGF44241.1| succinyl-CoA synthetase subunit beta [Vibrio parahaemolyticus
           10329]
          Length = 388

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 189/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITAEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|28897623|ref|NP_797228.1| succinyl-CoA synthetase subunit beta [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838592|ref|ZP_01991259.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus AQ3810]
 gi|260365988|ref|ZP_05778473.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           K5030]
 gi|260878222|ref|ZP_05890577.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AN-5034]
 gi|260895659|ref|ZP_05904155.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           Peru-466]
 gi|260901287|ref|ZP_05909682.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AQ4037]
 gi|33301644|sp|Q87RE8|SUCC_VIBPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|28805835|dbj|BAC59112.1| succinyl-CoA synthase, beta subunit [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748010|gb|EDM58869.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus AQ3810]
 gi|308088163|gb|EFO37858.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           Peru-466]
 gi|308090122|gb|EFO39817.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AN-5034]
 gi|308109839|gb|EFO47379.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AQ4037]
 gi|308111253|gb|EFO48793.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           K5030]
          Length = 388

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 188/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITAEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|51244136|ref|YP_064020.1| succinyl-CoA synthetase, beta chain [Desulfotalea psychrophila
           LSv54]
 gi|81643213|sp|Q6ARL2|SUCC_DESPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|50875173|emb|CAG35013.1| probable succinyl-CoA synthetase, beta chain [Desulfotalea
           psychrophila LSv54]
          Length = 386

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/393 (48%), Positives = 269/393 (68%), Gaps = 15/393 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L RKY++PV +G++ +++   ++A+K+L  P+  VK+QIHAGG       
Sbjct: 1   MKIHEYQAKQLFRKYSIPVPEGLLCTNLQEVKTALKSLQLPI-AVKAQIHAGG------- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V+    +ILG +L+T QTGP+G  V+ + +E+G  I RELYL
Sbjct: 53  ---RGKGGGVKLGKTATEVVQYADDILGMSLVTAQTGPSGRTVSKILLEEGVSIARELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
           S+LVDR    +  IA   GGM+IEEVA   P++I K+ I+PLIG  S  +    + L + 
Sbjct: 110 SILVDRERACITIIACQDGGMNIEEVAASTPERIGKIHINPLIGPRSYHINQAREWLNIA 169

Query: 180 QGQARIDGGDLFPN-LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           Q QAR     LF + LYK F D D S++EINPLII ++ +L  LD+K+  D NAL+R  +
Sbjct: 170 QEQAR--AFSLFIHALYKLFLDYDCSMVEINPLIITEDNQLIALDAKVDTDSNALFRQRE 227

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +Q++ D +E+D  E EA + NL+YI L GN+G MVNGAGLAMATMDIIK  G  PANFLD
Sbjct: 228 LQKMHDPAEDDPAEAEAAKFNLNYIKLSGNVGNMVNGAGLAMATMDIIKRAGAEPANFLD 287

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG AD +++   F+II +D++VK ILINIFGGI+RCD+L +G++ A  +V + +P+V+R
Sbjct: 288 VGGSADAERIENGFRIILADTNVKAILINIFGGILRCDILAQGVVQAAAKVSLQVPVVIR 347

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +EG NV  G  ++A+SGL++I A DL+DAA+KI
Sbjct: 348 MEGTNVKEGREILAKSGLSLINATDLNDAAEKI 380


>gi|254468094|ref|ZP_05081500.1| succinyl-CoA synthetase (beta subunit) [beta proteobacterium KB13]
 gi|207086904|gb|EDZ64187.1| succinyl-CoA synthetase (beta subunit) [beta proteobacterium KB13]
          Length = 388

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/389 (46%), Positives = 253/389 (65%), Gaps = 11/389 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LLRKY +    G V  +++   +  K +  P+ V+K+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKELLRKYEIQTPYGQVAETLNEVNALAKDIKNPV-VLKAQIHAGGRGKS--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +  +    ++LG  L+T Q  P+G  V+ +  E+  +I+ ELY 
Sbjct: 57  -------GGVKVVKSKEEALEFSSKLLGKNLVTYQNQPSGQPVHKILFEETENIINELYF 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR    V  + S+ GGM+IEE++K  P  I K   +P+ G+       L + L+  
Sbjct: 110 SILIDREEEKVCLVVSSAGGMEIEEISKKSPDLILKEFCNPITGLMDYQTRELANSLKFS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       + YK F + ++SLLEINPL+I        LD KIS DDNALY+   + 
Sbjct: 170 ADLAGKFNKFAKSAYKLFTENNLSLLEINPLVINDANDFVALDCKISIDDNALYKQKKLS 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S++DS+E EA    L+YIAL+G+IGCMVNGAGLAMATMD+I+  GG+PANFLDVG
Sbjct: 230 ELRDWSQDDSKEAEAHHAGLNYIALNGDIGCMVNGAGLAMATMDLIQHSGGSPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V+ AF+I+ SD +VK +L+NIFGGIMRCDV+ +GI+++ K+V ++IP+V+RLE
Sbjct: 290 GGASAETVSKAFRILLSDKNVKVVLVNIFGGIMRCDVIAEGIINSAKDVGVSIPIVVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD G +L+ ES LN+ +A +L DAA+
Sbjct: 350 GTNVDDGKKLLKESYLNIHSADNLTDAAK 378


>gi|304414844|ref|ZP_07395762.1| succinyl-CoA synthetase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283113|gb|EFL91527.1| succinyl-CoA synthetase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 388

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/396 (48%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +PV  G   S+   A +A   +PG  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFSENGLPVPIGYACSTAQEASAAAAKIPGDKWVVKCQVHAGGRGKAE-- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++  S ++V +   + LG  L+T QT   G  V  V VE   +I +ELYL
Sbjct: 59  --------GVKLVDSKEAVEAFATQWLGKNLVTYQTDAKGQPVKQVLVEAVTEIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR+S  V F+AST+GG++IE+VA++ P+ I KL +DPL G        L   L L 
Sbjct: 111 GVVVDRSSRRVMFMASTEGGVEIEKVAEETPELIHKLALDPLTGPQPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F + D+SL+EINPL+I K G L  LD K+S D NA +R   + 
Sbjct: 171 AKQVTQFSQIFMGLAKLFLESDLSLVEINPLVITKQGDLICLDGKLSVDGNASFRQKKLF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A +  L+Y+ALDG+IGCMVNGAGLAMATMDI+KL+G  PANFLDVG
Sbjct: 231 EMRDPSQEDERENHATKWELNYVALDGHIGCMVNGAGLAMATMDIVKLHGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVNEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N  +G + +AESGLN+I A  L+DAA K+V A +
Sbjct: 351 GNNAPLGVQKLAESGLNIIAATSLNDAATKVVAAAR 386


>gi|91228430|ref|ZP_01262355.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 12G01]
 gi|269967959|ref|ZP_06181999.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 40B]
 gi|91188014|gb|EAS74321.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 12G01]
 gi|269827482|gb|EEZ81776.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 40B]
          Length = 388

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 188/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|124265265|ref|YP_001019269.1| succinyl-CoA synthetase subunit beta [Methylibium petroleiphilum
           PM1]
 gi|124258040|gb|ABM93034.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylibium
           petroleiphilum PM1]
          Length = 386

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 249/381 (65%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G    +   A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGYPAFTGQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L T QTGP G +V  +Y+E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLGKSLDEVKALSGQILGMQLKTHQTGPEGQKVRRLYIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+       +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEVIDPLAGLGDAQAKKIAAAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      L  NLY+ + + D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 EGSHAQAVTLLQNLYRCYMETDASLVEINPLNCDSKGNLIALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCD +  G+++A + V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKAILVNIFGGIMRCDTIADGVVTASRAVGLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N D+G +++A+SGL +I A
Sbjct: 351 GTNEDLGKKILADSGLPIIAA 371


>gi|242238592|ref|YP_002986773.1| succinyl-CoA synthetase subunit beta [Dickeya dadantii Ech703]
 gi|242130649|gb|ACS84951.1| succinyl-CoA synthetase, beta subunit [Dickeya dadantii Ech703]
          Length = 388

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 187/386 (48%), Positives = 254/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 57  ------SGGVKVVNSKEDIRAFAEKWLGKHLVTYQTDANGQPVNQILVESATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLAGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQIAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGVDGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMRDASQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  V  +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVNAVLVNIFGGIVRCDLIADGIIGAVSEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTD 376


>gi|313682585|ref|YP_004060323.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155445|gb|ADR34123.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfuricurvum
           kujiense DSM 16994]
          Length = 389

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 194/398 (48%), Positives = 255/398 (64%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L +KYNVP  +G +  +   A  A + L G ++VVK+QIHAGGRG G   
Sbjct: 1   MNIHEYQAKELFKKYNVPTPRGHIAFTPDEAVKAAQELGGSVWVVKAQIHAGGRGLGGGV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +L        R  S ++ + S   +ILG  L+T QTGP G  V  VY+E+GADI +E YL
Sbjct: 61  KL-------ARSTSEVRELAS---QILGMQLVTHQTGPEGKLVQKVYIEEGADIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR S M   +AST+GGM IE+VA D P+KI K+ IDPL G  S     L   L L 
Sbjct: 111 GMLLDRASEMPIMMASTEGGMAIEDVAHDSPEKIIKVAIDPLTGFQSFHGRKLAFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ + D D  ++EINPLI   +G+   LD+K+ FD+NALYR   + 
Sbjct: 171 VEEINTFIKFASALYRVYMDHDAEMIEINPLIKTGDGKFLALDAKMGFDNNALYRQSQVN 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+SEE+  EIEA +  LSYI LDG++GCMVNGAGLAM TMD I   GG PANFLDVG
Sbjct: 231 EMRDLSEEEPTEIEAGKFGLSYIKLDGDVGCMVNGAGLAMGTMDTINYEGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K  K+++P+++RL+
Sbjct: 291 GGANAETVAKGFEIILKDPNVKAIFVNIFGGIVRCDRVANGILEATKLTKVDVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      ++  +G+ N+I A DL D A+K V A KG
Sbjct: 351 GTNAIEAAEILNNAGISNIIAATDLADGARKAVAAAKG 388


>gi|50120302|ref|YP_049469.1| succinyl-CoA synthetase subunit beta [Pectobacterium atrosepticum
           SCRI1043]
 gi|81645720|sp|Q6D7G2|SUCC_ERWCT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49610828|emb|CAG74273.1| succinyl-CoA synthetase beta chain [Pectobacterium atrosepticum
           SCRI1043]
          Length = 388

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 185/384 (48%), Positives = 253/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + +A+SGLN+I A  L
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSL 374


>gi|260772361|ref|ZP_05881277.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio metschnikovii
           CIP 69.14]
 gi|260611500|gb|EEX36703.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio metschnikovii
           CIP 69.14]
          Length = 388

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 189/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTVKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S  +V +  ++ LG  L+T QT   G  V+ + VE+ + I  ELYL
Sbjct: 58  -------GGVELHESKDAVKAFAQKWLGKNLVTYQTDTNGQPVSKILVEEASSIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGAQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLSEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDATQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+K+V A +G
Sbjct: 351 GTNAELGRDVLAKSGLDIIAAESLTDAARKVVAAAEG 387


>gi|86147659|ref|ZP_01065968.1| succinyl-CoA synthetase subunit beta [Vibrio sp. MED222]
 gi|218710209|ref|YP_002417830.1| succinyl-CoA synthetase subunit beta [Vibrio splendidus LGP32]
 gi|254778455|sp|B7VI35|SUCC_VIBSL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|85834570|gb|EAQ52719.1| succinyl-CoA synthetase subunit beta [Vibrio sp. MED222]
 gi|218323228|emb|CAV19405.1| Succinyl-CoA synthetase beta chain [Vibrio splendidus LGP32]
          Length = 388

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 185/396 (46%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGQMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A+ L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAVSLTDAAQKVVAAAE 386


>gi|254229705|ref|ZP_04923114.1| succinyl-CoA synthetase beta chain [Vibrio sp. Ex25]
 gi|262394881|ref|YP_003286735.1| succinyl-CoA ligase [ADP-forming] subunit beta [Vibrio sp. Ex25]
 gi|151937750|gb|EDN56599.1| succinyl-CoA synthetase beta chain [Vibrio sp. Ex25]
 gi|262338475|gb|ACY52270.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. Ex25]
          Length = 388

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 187/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFAQYDLALLEINPLVVTGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|256425554|ref|YP_003126207.1| succinyl-CoA synthetase subunit beta [Chitinophaga pinensis DSM
           2588]
 gi|256040462|gb|ACU64006.1| succinyl-CoA synthetase, beta subunit [Chitinophaga pinensis DSM
           2588]
          Length = 404

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 191/405 (47%), Positives = 255/405 (62%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MN+HEYQAK LL+KYNVPV +G+ + +  AA  A K L         VVK+QIHAGGRGK
Sbjct: 1   MNLHEYQAKELLKKYNVPVQEGIPVDTPEAAAEAYKQLKVQYGNEFAVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G  +      + GV V  + + V +    ILG  L+T QTG  G  VN V V       G
Sbjct: 61  GTIR---GKEQRGVAVGKNAEDVKTIAGNILGGVLVTIQTGEAGKLVNKVLVAQDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            + ++E YLS+L+DR  G    + ST+GGMDIEEVA + P KIFK L+ P   +      
Sbjct: 118 PNPIKEFYLSILLDRAKGQNVIMYSTEGGMDIEEVAHNTPDKIFKELVQPNTTLQPFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +     L G+A  +      NLY A+   D ++LEINPL    + ++  +D K++ DDN
Sbjct: 178 KIAFNFGLSGEAFKNMVKFVTNLYNAYVGLDAAMLEINPLFKTSDEKIIAVDCKLNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL RH D++ LRD++EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALMRHADLEALRDINEEDPTEVEAGKFNLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V A F+II  D  VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 298 EPANFLDVGGTANAQTVEAGFRIILKDPKVKAILINIFGGIVRCDRVAQGVIDAYQSIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +  AV
Sbjct: 358 IKVPIIVRLQGTNAEEAKKLIEESGLKVQSAILLSEAAALVNKAV 402


>gi|313674827|ref|YP_004052823.1| succinyl-CoA synthetase, beta subunit [Marivirga tractuosa DSM
           4126]
 gi|312941525|gb|ADR20715.1| succinyl-CoA synthetase, beta subunit [Marivirga tractuosa DSM
           4126]
          Length = 403

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 188/405 (46%), Positives = 261/405 (64%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQAK +L KY V + KG+V  +   A  A K L        YV+K+QIHAGGRGK
Sbjct: 1   MNIHEYQAKGILEKYGVTIQKGIVADTPEEATEAAKKLNKETGTEWYVLKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G+ KE  ++   GV +  SL+ V    + ILG TL+T QTG  G  V+ + V       G
Sbjct: 61  GKVKETDSN---GVVLAKSLEDVAPKSKAILGGTLVTHQTGEEGKLVSKLLVAQDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+ +L+DR  G    +AST+GG+DIE+VA++ P KI K  IDP +G+      
Sbjct: 118 EHEPKEYYVGILLDRAKGCNVIMASTEGGVDIEDVAENTPDKIIKEWIDPRVGLQGFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G A  +      +LY A+   D S+ EINP++   + ++  +D+K++ DD+
Sbjct: 178 KVAFKLGLEGDAFKNMVKFIHSLYTAYDATDSSMFEINPVLKTSDNKILAVDAKVNLDDS 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ ++RD SEED  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 238 ALYRHKDLADMRDKSEEDPAEVEAAESGLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F+II  D  V+ ILINIFGGI+RCD + KG++ A K +  
Sbjct: 298 DPANFLDVGGSANAETVEAGFRIILKDPKVEAILINIFGGIVRCDRVAKGVVEAYKNIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P+++RL+G N + G ++I +SGL V +AI L DAA ++  A+
Sbjct: 358 IKVPIIVRLQGTNAEEGAKIIEDSGLKVTSAIVLKDAALRVKEAL 402


>gi|126740184|ref|ZP_01755873.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
 gi|126718639|gb|EBA15352.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
          Length = 399

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  ++VK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILSNFGVAVPSGALAYSPEQAAYRARELGGEKWIVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     ++ G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCDSEGEIYEACEDMFGRKLVTHQTGPEGKGIYRVYVESAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V  +AS++GGM+IEE++ + P  I +  ++P +G+       +   L L+
Sbjct: 111 GFVLDRSSQRVMIVASSEGGMEIEEISAEKPDSIVRSTVEPAVGLQEFQAREIAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y AF + D +++EINPL+I  + R+  LD+K+SFDDNAL+RH  I 
Sbjct: 171 PGMVQQMVRTLQGCYAAFSELDATMVEINPLVITGDNRVLALDAKMSFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ IL+NIF GI RCD + +G++ A++E++I++P+V+RL 
Sbjct: 291 GGASPERVAKAFRLVLSDDNVQAILVNIFAGINRCDWVAEGVVQALRELEIDLPVVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL VI A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAKSGLPVIRATTLMEAAERAVGAWQ 386


>gi|95928577|ref|ZP_01311324.1| succinyl-CoA synthetase, beta subunit [Desulfuromonas acetoxidans
           DSM 684]
 gi|95135367|gb|EAT17019.1| succinyl-CoA synthetase, beta subunit [Desulfuromonas acetoxidans
           DSM 684]
          Length = 389

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 184/396 (46%), Positives = 254/396 (64%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L  +++PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MKIHEYQAKEILGSFDIPVPRGRVAVTADQVERAAKMMGGRC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    +      +E+ G  L+T QTGP G +V  + VE+  ++ +E YL
Sbjct: 57  -------GGVQVAHHPEQAHEIAKELFGKRLVTHQTGPEGLKVRRILVEETVEVGQEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GG++IEEVA + P+KI  L IDP  G+ S     +   + + 
Sbjct: 110 SITLDRQTSRYCLIASAEGGVNIEEVAANAPEKIHTLTIDPYTGLRSYQARQIVHKIGMT 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D   L  ++Y+   DKD SL+EINPL++ K G L  LD+KI+FDDNA++RH +  
Sbjct: 170 GGVAEDCVRLILDMYRCCLDKDCSLVEINPLVVTKAGWLLALDAKINFDDNAVFRHWEYH 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E++D S+ D  EI A + +LSYI LDGNIGCMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 230 EMQDYSQMDPLEISAGKFDLSYIKLDGNIGCMVNGAGLAMATLDVLKENGGDPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D  V+ + +NIFGGIMRCDV+  GI+ A  E+   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDKDVEAVFVNIFGGIMRCDVIAHGIIEAAGEMACQLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G+ V+ G  L+ ES LNV  A  L + A+ IV  +K
Sbjct: 350 GSQVEEGKALLKESPLNVQCADFLGEGAKMIVAMMK 385


>gi|83952285|ref|ZP_00961017.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
 gi|83837291|gb|EAP76588.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
          Length = 396

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/396 (45%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL+++ V V +G +  S   A    + L G   VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLKRFGVNVPRGGIAYSPEQAVYRAQELSGDKCVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV SS + +      +LG  L+T QTGP G  V  +YVE+  DI +E+YL
Sbjct: 58  -------GGVRVCSSDEEIADAASWMLGRKLVTHQTGPQGKLVGRLYVEEATDIRQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT   V  +AS QGGM+IE+++ + P  I + ++DP +G+ +     +   L L 
Sbjct: 111 GFVMDRTEERVVVVASAQGGMEIEDISANEPDSIIRSVVDPAVGMQAFQAREIAFQLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         YK     D S+LEINPL++  +G +  LD K+SFDDNAL+RH +I 
Sbjct: 171 PSLIAQASKTITGAYKMMDQLDASMLEINPLVVTGSGEIVALDCKVSFDDNALFRHPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED+RE  A    L+YI L+G IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDARETYAGDRGLNYIGLEGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  +FK + +D +V+ +L+NIF GI RCD + +G++ AV+E+ + +PLV+RL 
Sbjct: 291 GGASPERVLMSFKAVLNDPNVEAVLVNIFAGINRCDWIAEGVVRAVQELDLKLPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++AES LN+ TA  L +AA+K+V A +
Sbjct: 351 GTNVEEGRKILAESDLNITTAETLAEAAEKVVSAWR 386


>gi|260776537|ref|ZP_05885432.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607760|gb|EEX34025.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 388

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 187/397 (47%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFAQYDLALLEINPLVVTGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S +++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAEG 387


>gi|212635734|ref|YP_002312259.1| succinyl-CoA synthetase subunit beta [Shewanella piezotolerans WP3]
 gi|226734989|sp|B8CR00|SUCC_SHEPW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|212557218|gb|ACJ29672.1| Succinyl-CoA synthetase, beta subunit [Shewanella piezotolerans
           WP3]
          Length = 388

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 189/396 (47%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAENWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATQRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S L++I A  L DAA+++V A +
Sbjct: 351 GTNADLGREVLANSDLDIIAATSLTDAAEQVVKAAE 386


>gi|56696452|ref|YP_166809.1| malate--CoA ligase subunit beta [Ruegeria pomeroyi DSS-3]
 gi|56678189|gb|AAV94855.1| malate--CoA ligase, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 399

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILANFGVDIPPGALAYSPEQAAYRAREIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V SS   +      + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCSSDAEIQETCENLFGRKLVTHQTGPEGKGIYRVYVEGAVPIEREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V  +AS +GGM+IEE++ + P  I +  ++P +G+       +   L + 
Sbjct: 111 GFVLDRSSQRVMIVASAEGGMEIEEISAEKPDSIVRATVEPAVGLQDFQCRQIAFKLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PALTARMVRTLQGCYQAFSEYDATMVEINPLVITGDNRILALDAKMTFDDNALFRHPHIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SDS+V+ +L+NIF GI RCD + +G++ A+KEV++ +P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDSNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVEVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAKSGLPIIRARTLMEAAERAVGAWQ 386


>gi|222053863|ref|YP_002536225.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
 gi|221563152|gb|ACM19124.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
          Length = 390

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 180/396 (45%), Positives = 256/396 (64%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + + V +G V  +    E A K + G   +VK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILGSFGIAVPRGRVALTSDQVERAAKEMGGRC-IVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +++ G  L+T QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQELAKDLFGRKLVTPQTGPQGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GG++IEEVA+  P+KI  L IDP  G+       +   L L+
Sbjct: 110 SITLDRETSRYCLIASAEGGVEIEEVAQKSPEKIHILTIDPFTGLRPYQARKIALALGLK 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  DL  NLY+   ++D  L+EINPL+I K G L  +D+K++FDDN+++RH +  
Sbjct: 170 GSICEDCVDLILNLYRCCTERDCFLVEINPLVITKAGWLMAMDAKVNFDDNSMFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D S+ D  EI A + +LSYI L GNIGCMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 230 DMQDYSQLDPLEITAGKFDLSYIKLQGNIGCMVNGAGLAMATLDVLKESGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D+ VKG+ +NIFGGIMRCD++ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVTEAFKIILQDADVKGVFVNIFGGIMRCDIIAQGIIEAASEVHCALPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G+ V+ G +L+ +SGLNV    +L D A +IV  ++
Sbjct: 350 GSKVEEGKKLLMQSGLNVQIGNNLGDGATRIVQMLQ 385


>gi|77164232|ref|YP_342757.1| succinyl-CoA synthetase, beta subunit [Nitrosococcus oceani ATCC
           19707]
 gi|254435636|ref|ZP_05049143.1| succinyl-CoA synthetase, beta subunit subfamily [Nitrosococcus
           oceani AFC27]
 gi|76882546|gb|ABA57227.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosococcus
           oceani ATCC 19707]
 gi|207088747|gb|EDZ66019.1| succinyl-CoA synthetase, beta subunit subfamily [Nitrosococcus
           oceani AFC27]
          Length = 389

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 176/386 (45%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK L   Y +PV  G    SV  A +  + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MILHEFQAKCLFSDYGIPVPSGGPAGSVEEARAWARKLGGERWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV SS + +      +LG+ L+T QT   G  V  + VE  A I RE YL
Sbjct: 58  -------GGVRVVSSAEELSGFCSHLLGTRLVTAQTDAAGLPVQSLLVEQPAAIAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  +DR    V  +AS++GG+DIE+VA  YP +I +L + P++G+       +     L 
Sbjct: 111 AATLDRQLERVVIMASSRGGVDIEQVAAKYPGEILRLAVHPIVGLQPYQCRRVGFAFGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   +Y+ F ++D +L+E+NPL++ + G L  LD+K+  DDNA +RH   +
Sbjct: 171 SEQRRQLVQIMEKMYRLFLERDANLVEMNPLVVTEQGDLLALDAKVVLDDNAAFRHAAWE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++E+ +E+EA+ H LSYIAL+G+I CMVNGAGLAMATMD+IKL  G PANFLDVG
Sbjct: 231 ALRDPTQENQKEVEARTHGLSYIALEGDIACMVNGAGLAMATMDLIKLQKGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+I +D+ VK IL+NIFGGI+RCD++ +GI+ A++EV+I +P+V+RLE
Sbjct: 291 GTATAERVTEAFKLILTDTKVKSILVNIFGGIVRCDLIAEGIIQAMQEVEIQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+ ESG+ +ITA +L D
Sbjct: 351 GTNAKQGRTLLRESGMKLITADNLTD 376


>gi|192359200|ref|YP_001981994.1| succinyl-CoA synthetase beta chain [Cellvibrio japonicus Ueda107]
 gi|190685365|gb|ACE83043.1| succinyl-CoA synthetase beta chain [Cellvibrio japonicus Ueda107]
          Length = 403

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 184/384 (47%), Positives = 264/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+  ++V  A +A   + G ++VVK+Q+HAGGRGK    
Sbjct: 16  MNLHEYQGKQLFAQYGLPVSKGIAAATVEEAVAAADQIGGDMFVVKAQVHAGGRGKA--- 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 73  -------GGVKLVKSKDEIKAFAEKWLGQRLVTYQTDEKGQPVSRILVETCTDIAKELYL 125

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 126 GAVVDRSSRRIVFMASTEGGVEIEKVAHETPEKILKATIDPLVGAQPYQGRELAFKLGLE 185

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      ++F NL K F +KD++L+E+NPL+I   G L  LD+K+  D N++YRH +++
Sbjct: 186 GKQINQFVNIFVNLAKLFKEKDLALVEVNPLVITPEGNLHCLDAKLVVDSNSIYRHPELK 245

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A    L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 246 AMQDPSQEDPREAHAASWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 305

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + INIFGGI+RCD++ +G++ AVKEV + +P+V+RL+
Sbjct: 306 GGATKERVVEAFKIILSDDAVKAVFINIFGGIVRCDMIAEGVIGAVKEVGVKVPVVVRLQ 365

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G ++++ESGLN+I   DL
Sbjct: 366 GNNAELGAKVLSESGLNIIADTDL 389


>gi|114769504|ref|ZP_01447130.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
 gi|114550421|gb|EAU53302.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
          Length = 399

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + + G  +++K+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILSDFGVKVPNGGLAYSPEQAAYRAREMGGNKWIIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+   +I     +LG  L+T QTGP G  +  +YVE G  I RE+YL
Sbjct: 58  -------GGVKVCSNDNEIIEAASSMLGRKLVTHQTGPEGKGIYRLYVEAGVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  +  +AS++GGM+IEE++ + P+ I +  IDP +G+       +   L ++
Sbjct: 111 GFVLDRTTQRIMIVASSEGGMEIEEISANRPESIVRASIDPAVGLVEFQAREIAFQLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         + AF D D +++EINPL++  + ++  LD+K++FDDNAL+RH  I 
Sbjct: 171 PSLTQQMVRTLMGCFNAFQDLDATMVEINPLVVTTDHQVIALDAKMTFDDNALFRHPKIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESNAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLSGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V+ AF+++ SD  V+ IL+NIF GI RCD + +G++ A+K+  INIP+++RL 
Sbjct: 291 GGATPERVSKAFRLVRSDKKVEAILVNIFAGINRCDWVAEGVVQALKDDPINIPVIVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G R++A+SGL +I A  L +AA + V A K
Sbjct: 351 GTNVEEGQRILAKSGLPIIRAATLKEAADRAVSAWK 386


>gi|254459615|ref|ZP_05073031.1| succinyl-CoA synthetase beta subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206676204|gb|EDZ40691.1| succinyl-CoA synthetase beta subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 396

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 171/396 (43%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVEIPAGALAYSPEQAAYRAREMGGEKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +   ++ G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCDTDHEIQATCEDMFGKKLVTHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  +  +AS +GGM+IEE++++ P+ I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRTTQRIMIVASAEGGMEIEEISENKPESIVRSTVEPAVGLRDFQARDIAFKLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PSLTQSMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+GNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLEGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ +L+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPIIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A K
Sbjct: 351 GTNVEEGQKILAKSGLPIIRATTLMEAAERSVSAWK 386


>gi|269960711|ref|ZP_06175083.1| succinyl-CoA synthetase subunit beta [Vibrio harveyi 1DA3]
 gi|269834788|gb|EEZ88875.1| succinyl-CoA synthetase subunit beta [Vibrio harveyi 1DA3]
          Length = 388

 Score =  349 bits (895), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 187/396 (47%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRITTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|300114967|ref|YP_003761542.1| succinyl-CoA synthetase subunit beta [Nitrosococcus watsonii C-113]
 gi|299540904|gb|ADJ29221.1| succinyl-CoA synthetase, beta subunit [Nitrosococcus watsonii
           C-113]
          Length = 389

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 176/386 (45%), Positives = 250/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK L   Y +PV  G    S   A +  + L G  +V+K+Q+HAGGRGK    
Sbjct: 1   MILHEFQAKCLFSDYGIPVPSGGPARSAEEACAWARKLGGERWVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV +S++ +      +LG+ L+T QT  TG  V  + VE  A I RE YL
Sbjct: 58  -------GGVRVVASMEELSDFCSHLLGTRLVTAQTDATGLPVQNLLVEQPAAIAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  +DR    V  +AS++GG++IE+VA  YP +I +L I P++G+ S     +     L 
Sbjct: 111 AATLDRQLERVVIMASSRGGVNIEQVAATYPGEILQLAIHPVVGLQSYQCRRVGFAFGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +Y+ F ++D SL+E+NPL++ + G L  LD+K+  DDNA +RH   +
Sbjct: 171 SEQHRQLVQIMEKMYRLFLEQDASLVEMNPLVVTEQGDLLALDAKVVLDDNAAFRHATWE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++E+ +E+EA+ H LSYIAL+G+I CMVNGAGLAMATMD+IKL  G PANFLDVG
Sbjct: 231 ALRDPTQENQKEVEARTHGLSYIALEGDIACMVNGAGLAMATMDLIKLQHGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+I +D+ VK IL+NIFGGI+RCD++ +GI+ AV+EV+I +P+V+RLE
Sbjct: 291 GTATAERVTEAFKLILTDTKVKSILVNIFGGIVRCDLIAEGIIQAVQEVEIQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+ ESG+ +ITA DL D
Sbjct: 351 GTNAKQGRALLRESGMKLITADDLTD 376


>gi|332992990|gb|AEF03045.1| succinyl-CoA synthetase subunit beta [Alteromonas sp. SN2]
          Length = 388

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 181/386 (46%), Positives = 257/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +  +A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEYGLPVSEGYAADTPESAVEAANRIGGSEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     ++ +     LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKDTGAIKAFAENWLGKNLVTFQTDENGQPVSKILVETCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G        +   L L 
Sbjct: 111 GAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGAQPYQAREMAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++L+EINPL+I ++G L  LD+K++ D NALYR   ++
Sbjct: 171 GVQIKQFTKIFLGLAKMFEDLDVALIEINPLVIKEDGDLHCLDAKLAIDGNALYRQPKVK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D ++ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMQDPTQEDAREAHAAEFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A SGL++I A  L D
Sbjct: 351 GTNAELGREVLANSGLDIIAAESLTD 376


>gi|153835345|ref|ZP_01988012.1| succinyl-CoA synthetase beta chain [Vibrio harveyi HY01]
 gi|156973654|ref|YP_001444561.1| succinyl-CoA synthetase subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|189030226|sp|A7N158|SUCC_VIBHB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148868136|gb|EDL67295.1| succinyl-CoA synthetase beta chain [Vibrio harveyi HY01]
 gi|156525248|gb|ABU70334.1| hypothetical protein VIBHAR_01357 [Vibrio harveyi ATCC BAA-1116]
          Length = 388

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 187/396 (47%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRITTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|24373496|ref|NP_717539.1| succinyl-CoA synthetase subunit beta [Shewanella oneidensis MR-1]
 gi|77417484|sp|Q8EFN8|SUCC_SHEON RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|24347796|gb|AAN54983.1|AE015636_7 succinyl-CoA synthase, beta subunit [Shewanella oneidensis MR-1]
          Length = 388

 Score =  348 bits (894), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 190/397 (47%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEYWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+ +V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAANSLTDAAELVVKAAEG 387


>gi|320529609|ref|ZP_08030689.1| succinate-CoA ligase, beta subunit [Selenomonas artemidis F0399]
 gi|320138102|gb|EFW30004.1| succinate-CoA ligase, beta subunit [Selenomonas artemidis F0399]
          Length = 396

 Score =  348 bits (894), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 180/401 (44%), Positives = 257/401 (64%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR+Y V V  G+   +V AA    + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREYGVKVPNGLPAFTVDAAVDNAEKLGSPVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    RE+LG TL+T QTGP G  VN + +E+G+ I +E YL
Sbjct: 58  -------GGVKIAKTTDEVRRYARELLGKTLVTHQTGPEGKVVNRLLIEEGSKIKKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  +  + S +GG++IE+VA+++P+KI K  IDP++G+       +   + + 
Sbjct: 111 SFVIDRLSASIVMMGSEEGGVEIEKVAEEHPEKIIKEYIDPVVGLMPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L  NLY AF  KD S +EINPL++ ++  +  LD+K++FDD+ALYRH DI 
Sbjct: 171 APAVRKASKLMQNLYAAFIGKDCSQVEINPLVVTEDDDVIALDAKLNFDDSALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA  H L+Y+ L G++ CMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 231 ELRDDSEEDPKELEASAHGLNYVNLGGDVACMVNGAGLAMATVDMLKHCGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSAPEKIATAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKLISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  VD G  ++  + + NV  A ++++ A++IV  V
Sbjct: 351 VVRLEGTKVDEGREILKNTPIGNVFAAPNMEEGAKQIVELV 391


>gi|149911919|ref|ZP_01900518.1| succinyl-CoA synthase, beta subunit [Moritella sp. PE36]
 gi|149805012|gb|EDM65040.1| succinyl-CoA synthase, beta subunit [Moritella sp. PE36]
          Length = 388

 Score =  348 bits (893), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 252/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G   +  H A +    + G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYATNVPHEAAAFADKIGGDKWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  ++T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVTSKEEITAFAEYWLGKNIVTYQTDAKGQPVSQILVEAAGDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG+DIE VA+  P+ I K  IDPL+G        L   L LQ
Sbjct: 111 GAVIDRGSRKVVFMASTEGGVDIETVAEQTPELIHKATIDPLVGAQPFQARELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D DM+LLEINPLI+   G L  LD KI+ D NALYR   ++
Sbjct: 171 GAQIKQFTQIFMGLAKMFTDCDMALLEINPLIVTGAGDLVCLDGKITIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D+++ED+RE  A +  L+Y+ALDG+IGCMVNGAGLAM TMDI+ ++GG PANFLDVG
Sbjct: 231 AMQDITQEDAREAHAAKFELNYVALDGSIGCMVNGAGLAMGTMDIVNIHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVQEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A+S LN+I A  L D
Sbjct: 351 GNNAELGRAVLAKSDLNIIAASSLTD 376


>gi|163802534|ref|ZP_02196426.1| succinyl-CoA synthetase subunit beta [Vibrio sp. AND4]
 gi|159173617|gb|EDP58436.1| succinyl-CoA synthetase subunit beta [Vibrio sp. AND4]
          Length = 388

 Score =  348 bits (893), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 188/396 (47%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDADGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|71281693|ref|YP_268946.1| succinyl-CoA synthetase subunit beta [Colwellia psychrerythraea
           34H]
 gi|123632656|sp|Q482S1|SUCC_COLP3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71147433|gb|AAZ27906.1| succinyl-CoA synthase, beta subunit [Colwellia psychrerythraea 34H]
          Length = 388

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 254/397 (63%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGFACDTPQEAAEAADKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +    +  LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSKEEIKEFAQHWLGKNLVTYQTDANGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE++A++ P+ I +  IDPL+G        L   L L 
Sbjct: 111 GAVVDRASQRVVFMASTEGGVDIEKIAEETPELIHQAEIDPLVGAQPYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI  D NA+YR   ++
Sbjct: 171 PTQMKQFVKIFMGLAKMFEDCDFALLEINPLVITDEGNLHCLDGKIGIDGNAIYRQPKMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S+ED RE  A Q  L+Y+ALDG +GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AFHDPSQEDEREAHAAQWELNYVALDGTVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGANKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++  SGL++I A  L DAA K+V A +G
Sbjct: 351 GTNAELGREVLKNSGLDIIAAESLTDAATKVVAAAEG 387


>gi|330445471|ref|ZP_08309123.1| succinyl-CoA synthetase, &beta subunit [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489662|dbj|GAA03620.1| succinyl-CoA synthetase, &beta subunit [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 388

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 184/384 (47%), Positives = 248/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTPQQAAEAAGKIGGTKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   +    +  LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHETKDGIKQFAQNWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GGM+IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGMEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLEINPL+I  +  L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFTKIFMGLGKMFADYDLALLEINPLVITGDNNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G   +A+SGLN+I A  L
Sbjct: 351 GNNAEVGAAKLADSGLNIIAATSL 374


>gi|124004848|ref|ZP_01689691.1| succinyl-CoA synthetase beta chain [Microscilla marina ATCC 23134]
 gi|123989526|gb|EAY29072.1| succinyl-CoA synthetase beta chain [Microscilla marina ATCC 23134]
          Length = 396

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 188/401 (46%), Positives = 259/401 (64%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQ K++LRKY V    G VI ++  A+  IK +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKSILRKYGVATPAGHVIENLSQAKDIIKKVQSESGSEKVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+  +     ILG  L+T QTG  G +V+ + VE+     G
Sbjct: 56  -----GGRGKGGGVKLADNLEQALEYADNILGMQLVTPQTGDEGKKVHKLLVEENVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +  +E Y+ +L+DR +  +  +AST+GGMDIEEVA+  P+KI K  IDP +G+ +    
Sbjct: 111 EEEPKEFYMGILLDRNTSKIVIMASTEGGMDIEEVAEKTPEKIVKEWIDPRVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G++  +G      LYKA+ D D +++EINP++   + R+   D KI  DDN
Sbjct: 171 KVAFALGLKGKSLKEGVKFIYALYKAYTDSDATMVEINPMLKTSDSRILAADCKIDLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ E+RDV+EED  E+EAK+ +L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALYRHADLAEMRDVTEEDPFEVEAKESDLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F+II  D +VK ILINIFGGI+RCD + KG++ A K +  
Sbjct: 291 EPANFLDVGGGANPKTVEAGFRIILKDPNVKAILINIFGGIVRCDRVAKGVVEAYKNIGD 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N + G ++I ESGL V +AI L DAA K+
Sbjct: 351 IPVPIIVRLQGTNAEEGAKIIDESGLKVTSAIVLKDAADKV 391


>gi|325981126|ref|YP_004293528.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Nitrosomonas sp.
           AL212]
 gi|325530645|gb|ADZ25366.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Nitrosomonas sp.
           AL212]
          Length = 393

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 176/394 (44%), Positives = 253/394 (64%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L +Y V +A+G +  SV  A    + + G ++VVK+QIH+G RGK    
Sbjct: 1   MNIHEYQAKEILAEYGVKIAEGGLAYSVVEAVQRAREIEGDVWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  +   V   + E++G  L+T QTGP G   + +YVE G  I +E+YL
Sbjct: 58  -------GGIKVCRTHTEVEQAVEELIGKKLVTHQTGPAGKICSRIYVEAGTHISKEMYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V  I + +GGM+IE++A+  P+ I K+ I+P +G+       +   L + 
Sbjct: 111 SFMIDRASERVIMIGAAEGGMEIEKLAETNPEAIIKIYIEPAVGLQDFQARKMAFGLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+A  D D ++LEINPL+I  N  +  LD+K+ FD+NAL+R   I 
Sbjct: 171 PAQLNHAVKTIKGCYRALRDLDANVLEINPLVITANNEIVALDAKMVFDENALFRRHKIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ D RE+ A +  LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDNTQVDPREVAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D++VK +L+NIF GI RCD + +G++ AVK + + IPLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADANVKAMLVNIFAGINRCDWIAEGVVQAVKNIDMKIPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G  +I  SGL +ITA  L +AA+K+V A
Sbjct: 351 GTNVEEGRSIIKNSGLPIITADTLAEAAEKVVRA 384


>gi|255577916|ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
 gi|223530658|gb|EEF32531.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
          Length = 425

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 195/407 (47%), Positives = 260/407 (63%), Gaps = 18/407 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPL-YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV  +S+     AI+   P     VVKSQI AGGRG G+
Sbjct: 27  LNIHEYQGADLMSKYGINVPKGVAAASIDEVRKAIQDVFPDKSELVVKSQILAGGRGLGK 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY--------VED 110
           FK      +GGV +  + K+V     ++LG  L+TKQTGP G  V+  Y          D
Sbjct: 87  FKN---GFEGGVHIVKADKAV-ETAGKMLGQILVTKQTGPQGKVVSKTYGVIAMTKSNSD 142

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
               + +  L  LV    G++  IA  +GG  IE++A+ +P  I K+ ID   G+T ED 
Sbjct: 143 NIIFMVDDLLCFLV----GVLLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDA 198

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           A + D L  +   R D  +    LYK FC+ D +LLEINP+      +L   D+K++FDD
Sbjct: 199 AKVVDGLAPKVADRNDSIEQVKKLYKLFCECDCTLLEINPMAETAENQLVAADAKLNFDD 258

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA +R  ++ +LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+G
Sbjct: 259 NAAFRQKELFKLRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHG 318

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLDVGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V 
Sbjct: 319 GTPANFLDVGGNASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVA 378

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           + +P+V+RLEG NVD G R++ ESG+ +ITA DLDDAA+K V A  G
Sbjct: 379 LKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAASG 425


>gi|261856574|ref|YP_003263857.1| succinyl-CoA synthetase subunit beta [Halothiobacillus neapolitanus
           c2]
 gi|261837043|gb|ACX96810.1| succinyl-CoA synthetase, beta subunit [Halothiobacillus
           neapolitanus c2]
          Length = 401

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 184/387 (47%), Positives = 248/387 (64%), Gaps = 15/387 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKG 57
           MN+HEYQAKALL  ++VPVA G+VI+  H A++A   LP      +V+K+QIH+G RGK 
Sbjct: 1   MNLHEYQAKALLTGFSVPVATGLVIN--HPAQAADDQLPPSDDQRWVLKAQIHSGARGKA 58

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S   + +   E+LG TL+T QTGPTG  V+ + +E  + I +E
Sbjct: 59  ----------GGVLIADSPDDIRAKAAELLGKTLVTHQTGPTGLPVHQLLIEPASAITQE 108

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL++ +DR    V  IAS  GGMDIE+V+ ++P  IF+L I+P +G+       L   L
Sbjct: 109 LYLAMTIDRQRQRVVVIASQHGGMDIEQVSAEHPDAIFRLYINPTVGLMGYQARRLGFAL 168

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L   A      L   +Y AF   D  L+EINPL +  +  L  +D+KI+ D NA YR  
Sbjct: 169 GLSDTALKQFPALLRGVYDAFIKNDADLIEINPLAVTADNTLLAVDAKIAIDGNAAYRQK 228

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            +   RDV++ED  E+ A+   L+YI+L G I CMVNGAGLAMATMD+I+  GG+PANFL
Sbjct: 229 ALFATRDVTQEDPTEVAAQASGLNYISLTGEIACMVNGAGLAMATMDLIQSAGGSPANFL 288

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGG   +KVAAAFK+I ++  VK IL+NIFGGI+RCD++  GI++A  EV + +P V+
Sbjct: 289 DVGGGTSTEKVAAAFKLILANPRVKAILVNIFGGIVRCDLIANGIIAAAHEVGLTLPTVV 348

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDL 384
           RLEG N   G RL+AESGLN+I   DL
Sbjct: 349 RLEGTNAAEGRRLLAESGLNLIAENDL 375


>gi|148978240|ref|ZP_01814758.1| succinyl-CoA synthetase subunit beta [Vibrionales bacterium SWAT-3]
 gi|145962541|gb|EDK27818.1| succinyl-CoA synthetase subunit beta [Vibrionales bacterium SWAT-3]
          Length = 388

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 184/396 (46%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVSAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|4512117|gb|AAD21622.1| succinyl-CoA synthetase beta subunit [Pseudomonas aeruginosa PAO1]
          Length = 388

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 182/373 (48%), Positives = 253/373 (67%), Gaps = 10/373 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAE 373
           G N ++G +++AE
Sbjct: 351 GNNAELGAKVLAE 363


>gi|254455654|ref|ZP_05069083.1| malate--CoA ligase subunit beta [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082656|gb|EDZ60082.1| malate--CoA ligase subunit beta [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 386

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V + +G ++ S   AE+  + + G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILSSFGVTIPRGGIVYSPETAENKAREIGGSKWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ V +S   V     ++LG  L+T QTGP G  VN +Y+E+ +DI +ELYL
Sbjct: 58  -------GGIIVCNSPLEVAQATDKLLGKKLVTNQTGPEGKIVNRIYIEEASDIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+ DR+S  +  +AST+GGM +EE+AK+ P+ I +  I+  +G+ +     L   L ++
Sbjct: 111 GLVFDRSSESIMVVASTEGGMSVEEIAKEKPETIIRSKIEVAVGIQNFQARELAFGLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +      KAF + D +++E+NPL+I K  ++  LD K+SFD+NA++R   + 
Sbjct: 171 PELIRRASETIIGCAKAFSELDATMVEVNPLVISKQKQILALDCKMSFDNNAMFRRDKVS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ED +E+ A    L+Y++L+GNIG ++NGAGLAMA+MD+IKL GG PANFLDVG
Sbjct: 231 ELRDKTQEDEKEVFASDRGLNYVSLEGNIGNIINGAGLAMASMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +K+  AF++IT D  VK IL+NIF GI RCD + +GI+ A+++++I +PLV+RL 
Sbjct: 291 GGATPEKIVKAFRLITMDKKVKVILVNIFAGINRCDWVAEGIVQALEKIEIKVPLVIRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ GN+++ +S LN I A  L+DAA K V A+K
Sbjct: 351 GTNVEKGNKILQDSKLNYIEANTLEDAANKAVAALK 386


>gi|110681359|ref|YP_684366.1| malate--CoA ligase subunit beta [Roseobacter denitrificans OCh 114]
 gi|109457475|gb|ABG33680.1| malate-CoA ligase, beta subunit, putative [Roseobacter
           denitrificans OCh 114]
          Length = 399

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 252/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILASFGVDVPPGALAYSPEQAAYRARELGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   +      + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCDSDVEIHKTCEGLFGRKLVTHQTGPEGKGIYRVYVEGAVPIEREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRTS  V  +AS +GGM+IE+++ D P  I +  ++P +G+       +   L + 
Sbjct: 111 GFVLDRTSQRVMIVASAEGGMEIEDISADKPDSIVRDTVEPAVGLQDFQCRQIAFKLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++E+NPL++  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PALTQRMVRTLQGCYRAFREYDATMVEVNPLVVTGDNRILALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD SV+ IL+NIF GI RCD + +G++ A++EV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQALREVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAQSGLPIIRATTLMEAAERAVGAWQ 386


>gi|255660004|ref|ZP_05405413.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mitsuokella
           multacida DSM 20544]
 gi|260847757|gb|EEX67764.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mitsuokella
           multacida DSM 20544]
          Length = 398

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 183/402 (45%), Positives = 254/402 (63%), Gaps = 16/402 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+KA+LR Y V V  G    SV  A    + L     VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKAILRSYGVNVPTGKPAFSVEEAVENARELGTDTVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL++V     E+LG  LIT QTGP G RVN + +E GA I +E YL
Sbjct: 58  -------GGVKVVHSLEAVEKAAEELLGKVLITHQTGPAGKRVNRLLIEAGAAIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  +  + S +GGM+IE+VA + P KI K  IDP +G+       +   +   
Sbjct: 111 SFVIDRQTARIVMMGSEEGGMEIEKVAAEMPDKILKEYIDPAVGLLPFQANRMAYGMHFP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      L  NLY+AF  KD SL EINPL++ ++  +  LD+K++FDD+AL+RH D++
Sbjct: 171 HDSVRKATKLMMNLYRAFVGKDCSLAEINPLVVTEDAEVMALDAKLNFDDSALFRHPDLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E  A +  L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 231 ELRDETEEDPKERRAAKAGLNYVNLGGDVACMVNGAGLAMATVDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF+I+      KGI +NIFGGI +CD++ +GI+ A K +      + +P+
Sbjct: 291 GDSTPEKIAEAFRIMLDGGQAKGIFVNIFGGINKCDLVAEGIVDAAKMISEDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           V+RLEG NV+ G  ++ ++ + NVI A  ++  A+ IV  VK
Sbjct: 351 VVRLEGTNVERGREILQDTPIANVIMAPTMEGGAETIVRLVK 392


>gi|217977878|ref|YP_002362025.1| malate--CoA ligase subunit beta [Methylocella silvestris BL2]
 gi|217503254|gb|ACK50663.1| succinyl-CoA synthetase, beta subunit [Methylocella silvestris BL2]
          Length = 399

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 172/381 (45%), Positives = 250/381 (65%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQAK +L  + V   +G V  S   A      L G  + VK+QIH+GGRGK    
Sbjct: 6   LDIHEYQAKEILANFGVATPRGAVAYSPDQAVYCATELGGWHWAVKAQIHSGGRGKA--- 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   ++LG TL+T QTGP G  V  VY+E      RE+YL
Sbjct: 63  -------GGVKLCKTYNEVRAAASDMLGKTLVTNQTGPEGKIVQRVYIEAAEPFDREIYL 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS  GGM+IEE+AK++P++I +++++P +G+ + +   L   L L 
Sbjct: 116 GFVLDRKVERVRIIASRFGGMEIEEIAKEHPEEILQVVVEPAVGLQAFEARELAFGLGLN 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D +++EINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 176 LKQVSRAVQSMLGCYRAFRDLDATMVEINPLVVTKDDRVLALDAKMSFDDNALFRRSAIS 235

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD S+ED RE++A +HNL+Y+ LDG+IGC+VNGAGLAMATMD+IK  GGAPANFLDVG
Sbjct: 236 DMRDHSQEDPREVQAAEHNLNYVGLDGDIGCIVNGAGLAMATMDMIKYAGGAPANFLDVG 295

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VAAAF+++ SD +VK IL+N+F GI RCD + +G++ A + + +N+PL++RL 
Sbjct: 296 GGASPERVAAAFRLVLSDRNVKAILVNVFAGINRCDWVAEGVVQACRTLNVNVPLIVRLS 355

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N   G  +I  SGL +I+A
Sbjct: 356 GTNFAAGREIIVNSGLPIISA 376


>gi|145346224|ref|XP_001417593.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577820|gb|ABO95886.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 420

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 179/390 (45%), Positives = 261/390 (66%), Gaps = 5/390 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEYQ   +++K+ V V  G    ++   + A + + G   VVKSQI AGGRG G F 
Sbjct: 28  LHVHEYQGAEIMKKFGVRVPIGAACGTLDEVDDAARAMRGDEVVVKSQILAGGRGLGTF- 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV   +  ++  +  + +LG TL+TKQ+GP G  VN VYV +   + RE+Y 
Sbjct: 87  --ASGFEGGVHAVAKTRARETAAK-MLGGTLVTKQSGPAGKPVNVVYVAEKMTLTREMYF 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR S     IAS +GG  IE++A+ +P+KI K+ +D   G+T      L   L + 
Sbjct: 144 AITLDRASAGPLVIASAEGGTSIEDLAQSHPEKIIKMRLDIERGMTKTQADELVKRLGIL 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+ F   D +++E+NPL   ++GR+   D+K++FDDNA YR  ++ 
Sbjct: 204 KHVDEAAKQLM-GLYETFSKTDCTMIEVNPLAEDQDGRVVAADAKLNFDDNAEYRQSELF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE++A + +L+YI LDGNIGCMVNGAGLAMATMDII+LYGG+PANFLDVG
Sbjct: 263 SLRDTSQEDPREVQASKFDLNYIGLDGNIGCMVNGAGLAMATMDIIQLYGGSPANFLDVG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +++V  AFKI+T+D  V+ IL+NIFGGIM+CDV+  GI++A K+V + +PL++RLE
Sbjct: 323 GNASEEQVVEAFKILTADPKVQAILVNIFGGIMKCDVIAAGIVAAAKQVDLKVPLIVRLE 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G NV+ GN+++  SG+ ++TA DLDDAAQK
Sbjct: 383 GTNVEAGNKILKSSGMTIVTAEDLDDAAQK 412


>gi|83814561|ref|YP_445252.1| succinyl-CoA synthetase beta chain [Salinibacter ruber DSM 13855]
 gi|123529069|sp|Q2S3H9|SUCC_SALRD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83755955|gb|ABC44068.1| succinyl-CoA synthetase beta chain [Salinibacter ruber DSM 13855]
          Length = 392

 Score =  345 bits (886), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 181/399 (45%), Positives = 256/399 (64%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           M +HEYQAK L R Y V V  G+V  +V AA  A + L       L++VK+QIHA     
Sbjct: 1   MKLHEYQAKGLFRDYGVSVPDGIVAETVDAAVDAARRLEEENDATLFIVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S++ V      ILG  L+T QTGP G  V  + V +G DI +
Sbjct: 56  -----GGRGKGGGVKLAHSVEEVREHADNILGMDLVTHQTGPEGQTVRKILVTEGVDIDQ 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR + M A + ST+GG+DIE VA++ P+KI ++ +DP IG+       L   
Sbjct: 111 EYYLGVTLDRETSMNAIMVSTEGGVDIETVAEESPEKIQRVWVDPSIGLRPFQTRQLAFA 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L+G A          LY+AF + D +L EINPL+    G +  +D+K++ DDNAL+RH
Sbjct: 171 MGLEGDAFKQAVASIQGLYEAFEENDCTLAEINPLVQTPGGDIEAVDAKVNLDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++E+RD+ EED  E++A +H LSYI LDGN+GCMVNGAGLAMATMDIIKL GG PANF
Sbjct: 231 PDLEEMRDLHEEDPTEVKAGEHGLSYITLDGNVGCMVNGAGLAMATMDIIKLAGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V A F+II  D +V+ +L+NIFGGI+RCD + +G++ A K + I++PL+
Sbjct: 291 LDVGGAASAETVEAGFRIILEDPNVEALLLNIFGGIVRCDRVAQGVIEAAKNIDIDVPLI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G N + G RL+ ES L++ +A+ L +AA ++  A+
Sbjct: 351 VRLQGTNAEEGKRLLDESDLSLRSAVLLKEAADEVTAAL 389


>gi|167520005|ref|XP_001744342.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777428|gb|EDQ91045.1| predicted protein [Monosiga brevicollis MX1]
          Length = 397

 Score =  345 bits (886), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 183/398 (45%), Positives = 251/398 (63%), Gaps = 5/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L+++Y++ V K     +   A    K L  P  V+K+Q+HAGGRGKG F 
Sbjct: 2   LNLHEYQSKGLMQEYDIEVQKFFATDNAENALQLAKELNVPEIVLKAQVHAGGRGKGTFS 61

Query: 61  ELPADSKGGVR-VESSLKSVISD-IREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
              +  K GV  +       + D + +++G  L+TKQT P G  VN V V +  DI RE 
Sbjct: 62  ---SGLKSGVHLIPGDQPEKVKDLVEQMIGYNLVTKQTPPDGVTVNKVMVAEALDIARET 118

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR SG    + S +GG+DIEEVA+  P+ IFK  +D   GV    +  +   L 
Sbjct: 119 YFAILMDRESGGPVLVGSPEGGVDIEEVAERSPELIFKEPVDINEGVQDAQLERMATNLG 178

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             G            LY+ F   D S +EINP     +GR+   D+KI+FDDNA +R   
Sbjct: 179 FTGAKHEKAKKEMKQLYELFMGVDASQVEINPFAETPDGRVLCFDAKINFDDNAAFRQQK 238

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD +EED RE+EA + NL+YI +DGNI C+VNGAGLAMATMDIIK +GG PANFLD
Sbjct: 239 IFAMRDTAEEDPREVEASKFNLNYIGMDGNIACLVNGAGLAMATMDIIKHHGGEPANFLD 298

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGG  +  VA AF+I+TSD  V+ IL+NIFGGI+ C  +  GI+ A +EV++ +PLV+R
Sbjct: 299 CGGGVTEQMVANAFRILTSDQQVEAILVNIFGGIVNCATIASGIVFACREVELQLPLVVR 358

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NV+ G +++A+S L +I A DLD+AAQK V AV+
Sbjct: 359 LEGTNVEGGKQILADSKLPIIFAADLDEAAQKAVAAVR 396


>gi|194867056|ref|XP_001971996.1| GG14126 [Drosophila erecta]
 gi|190653779|gb|EDV51022.1| GG14126 [Drosophila erecta]
          Length = 416

 Score =  345 bits (886), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 261/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL    NG +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDNGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|294507118|ref|YP_003571176.1| Succinyl-CoA synthetase, beta subunit [Salinibacter ruber M8]
 gi|294343445|emb|CBH24223.1| Succinyl-CoA synthetase, beta subunit [Salinibacter ruber M8]
          Length = 392

 Score =  345 bits (886), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 181/399 (45%), Positives = 256/399 (64%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           M +HEYQAK L R Y V V  G+V  +V AA  A + L       L++VK+QIHA     
Sbjct: 1   MKLHEYQAKGLFRDYGVSVPDGIVAETVDAAVDAARRLEEENDATLFIVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S++ V      ILG  L+T QTGP G  V  + V +G DI +
Sbjct: 56  -----GGRGKGGGVKLAHSVEEVREHAGNILGMDLVTHQTGPEGQTVRKILVTEGVDIDQ 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR + M A + ST+GG+DIE VA++ P+KI ++ +DP IG+       L   
Sbjct: 111 EYYLGVTLDRETSMNAIMVSTEGGVDIETVAEESPEKIQRVWVDPSIGLRPFQTRQLAFA 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L+G A          LY+AF + D +L EINPL+    G +  +D+K++ DDNAL+RH
Sbjct: 171 MGLEGDAFKQAVASIQGLYEAFEENDCTLAEINPLVQTPGGDIEAVDAKVNLDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++E+RD+ EED  E++A +H LSYI LDGN+GCMVNGAGLAMATMDIIKL GG PANF
Sbjct: 231 PDLEEMRDLHEEDPTEVKAGEHGLSYITLDGNVGCMVNGAGLAMATMDIIKLAGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V A F+II  D +V+ +L+NIFGGI+RCD + +G++ A K + I++PL+
Sbjct: 291 LDVGGAASAETVEAGFRIILEDPNVEALLLNIFGGIVRCDRVAQGVIEAAKNIDIDVPLI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G N + G RL+ ES L++ +A+ L +AA ++  A+
Sbjct: 351 VRLQGTNAEKGKRLLDESDLSLRSAVLLKEAADEVTAAL 389


>gi|118602196|ref|YP_903411.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|189081791|sp|A1AVI3|SUCC_RUTMC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118567135|gb|ABL01940.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 386

 Score =  345 bits (886), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 186/396 (46%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK L R  ++ + KG++I +        K L G ++VVK+QIHA         
Sbjct: 1   MHIHEYQAKTLFRCRDIQIPKGILIDNTTKINDVCKALGGDVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    S++ V     ++LGS LIT QT   G  V  + +E   +I RELYL
Sbjct: 52  -GGRGKGGGVIFCHSIEKVERVCNQLLGSKLITPQTDAKGLPVGQLLIEAKQNIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +  +  ++ST+GGMDIE+VA   P KI K  IDPL  ++ +D   L   L   
Sbjct: 111 SLLIDRQTHKITVLSSTKGGMDIEKVASKTPDKIIKFGIDPLGSLSVQDCTFLAKKLGFN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +   +LY+ F  KD++L+EINPLII +  +L  LD KI FDDNALYRH DI 
Sbjct: 171 TELTKQFNNTLLSLYEIFTQKDVNLIEINPLIITQENKLLALDGKIDFDDNALYRHKDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+S+ED +E  A ++ L+YI  DGNIGCMVNGAGLAMATMD+I+ +GG+PANFLDVG
Sbjct: 231 KLRDISQEDEKERLASEYQLNYILFDGNIGCMVNGAGLAMATMDLIEHFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   D+VA AF++I ++++VK IL+NIFGGI+ CD++ +GIL A+K V + +P+V+RLE
Sbjct: 291 GGTTADRVAKAFELIQTETNVKSILVNIFGGIVHCDLIAQGILQAIKTVGLTLPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+ +S  N+    DL  AA KIV   K
Sbjct: 351 GTNAPEGLNLLNKSKFNIHVESDLTKAAIKIVKLTK 386


>gi|85711261|ref|ZP_01042320.1| succinyl-CoA synthetase subunit beta [Idiomarina baltica OS145]
 gi|85694762|gb|EAQ32701.1| succinyl-CoA synthetase subunit beta [Idiomarina baltica OS145]
          Length = 388

 Score =  345 bits (886), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 187/384 (48%), Positives = 252/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L +++ +PV++G    +   A  A K + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEFGLPVSEGFACDTADEAVEAAKRIGGDTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V +   + LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSTDEVRAFAEQWLGKNLVTFQTDENGQPVAKILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+KI K+ IDP +G        L   L L 
Sbjct: 111 GAVVDRGSRKIVFMASTEGGVEIEKVAEETPEKILKVEIDPTVGAQPFQGRELGFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F   D++LLEINPL+I   G L  LD+K+  D NALYR   I+
Sbjct: 171 ADQVKQFTKIFLGLAKMFEQYDLALLEINPLVITDEGNLHCLDAKVGIDSNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE EA +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAEAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDSSVK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDSSVKAVLVNIFGGIVRCDMIAEGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + + ESGLN+I A  L
Sbjct: 351 GNNAELGTQKLNESGLNIIAAESL 374


>gi|254994743|ref|ZP_05276933.1| succinyl-CoA synthetase subunit beta [Anaplasma marginale str.
           Mississippi]
          Length = 386

 Score =  345 bits (885), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 198/396 (50%), Positives = 263/396 (66%), Gaps = 15/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  + V V +GVV+ SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKGVLSSFGVTVPRGVVVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S +R++L S L+T QT P G +VN VY+E+G DI +E Y+
Sbjct: 58  -------GGVKIGKTKDEVKSLVRQMLHSVLVTHQTSPEG-QVNKVYLEEGVDIGKEYYI 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DI  VAK+ P  +  + +DPL G  S     LC    L 
Sbjct: 110 SAVVDRSVGRVSIIFSSEGGVDIA-VAKERPNMVSVVHVDPLYGFRSFHGQELCRRFGL- 167

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G  ++ G   +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I
Sbjct: 168 GPKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEI 227

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDV
Sbjct: 228 AKLQDPDEYAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDV 287

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +N+PLV+RL
Sbjct: 288 GGGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVNVPLVVRL 346

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 347 SGTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 382


>gi|290561006|gb|ADD37905.1| Succinyl-CoA ligase subunit beta, mitochondrial [Lepeophtheirus
           salmonis]
          Length = 418

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 183/395 (46%), Positives = 250/395 (63%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL  +NV V K ++  +   A +  K  P   YV+K+QI AGGRGKG F 
Sbjct: 25  LNLLEYQSKGLLEGHNVKVQKFLMAENDAEAIAIPKKFPCDEYVIKAQILAGGRGKGIFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +    + V S    +LG +LITKQT PTG  V+ V V +  DI RE Y 
Sbjct: 85  N---GFKGGVHLTKDKRQVASLCSNMLGHSLITKQTPPTGIPVSKVMVAEAIDIKRETYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       +AS  GG+DIE+VA+  P++I K+ I    G T E    +   L  +
Sbjct: 142 CILLDREYNGPVIVASPDGGVDIEDVAERTPERIKKIPISISTGCTHEIAQDVAAFLGFE 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+ +        NLY  F   D   LE+NPL    +G +   D+K+ FDDNA +R  +I 
Sbjct: 202 GELKEQCAGQIKNLYDMFIKVDCVQLEVNPLAETTDGMIYTADAKLGFDDNAEFRQKNIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D +E D RE+EA  HNL+Y+ +DGNIGC+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 262 KMEDTTEMDPREVEAAAHNLNYVQMDGNIGCLVNGAGLAMATMDIIKLYGGDPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +++V  AF+IIT DS VK IL+N+FGGI+ C  +  G+++A K + +N+PLV+RLE
Sbjct: 322 GSVQEEQVKEAFRIITEDSKVKAILVNVFGGIVNCATIANGVVNACKSINLNLPLVVRLE 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+   +++ ESGL + +A DLDDAA+K V A+
Sbjct: 382 GTNVEAAKKILEESGLPIQSAADLDDAAKKAVKAL 416


>gi|195427883|ref|XP_002062006.1| GK17298 [Drosophila willistoni]
 gi|194158091|gb|EDW72992.1| GK17298 [Drosophila willistoni]
          Length = 416

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +K    P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAELVKKFDCPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSEVLSLSQQMIGNRLITKQTPKSGILVNKVMVARSVNITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    ++   +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKILTIPLDIGKPISESTLIKVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A     D    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDAIKRCADEIQKLYTLFKSVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +L D++EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 DL-DITEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++K+++PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLSVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV     ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVTKAREILKNSGLPIQTAADLDDAAHKAVAAL 415


>gi|312129840|ref|YP_003997180.1| succinyl-CoA synthetase, beta subunit [Leadbetterella byssophila
           DSM 17132]
 gi|311906386|gb|ADQ16827.1| succinyl-CoA synthetase, beta subunit [Leadbetterella byssophila
           DSM 17132]
          Length = 403

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 190/399 (47%), Positives = 261/399 (65%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L KY V V +GVV S+V  AE A + +         VVKSQIHAGGR  
Sbjct: 1   MNIHEYQGKEILSKYGVRVQRGVVASTVEEAEKAYQEISELTNSKFAVVKSQIHAGGR-- 58

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
               ++    + GV++  S + V +    +LG+TL+T QTG  G  VN V V +     G
Sbjct: 59  -GKGKIRGTEQRGVQLAKSAEDVKTIASNLLGNTLVTIQTGEEGKVVNKVLVAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +ELY+S+L+DRT      +AST+GGMDIEEVA+  P+KI K  IDP +G       
Sbjct: 118 DSEPKELYVSILLDRTKACNVIMASTEGGMDIEEVAEHTPEKIIKEWIDPRVGFQGYQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L L G A  +      +LYKA+ + D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 178 NVAYKLGLTGNANKEMVKFLTSLYKAYDETDSSMFEINPVLKTSDDKILAVDAKVNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+  LRD SEED  E+EA + +L+Y+ LDGN+GCMVNGAGLAMATMDIIKLYGG
Sbjct: 238 ALFRHPDLAALRDKSEEDPMEVEASESDLNYVKLDGNVGCMVNGAGLAMATMDIIKLYGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F++I  D +VK I +NIFGGI+RCD +  GI+ A K++ +
Sbjct: 298 EPANFLDVGGGANAVTVEAGFRLILKDPNVKAIFVNIFGGIVRCDRVANGIVEAYKKIGE 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           I +P+V+RL+G N + G ++I ESGL V +A+ L +AA+
Sbjct: 358 IPVPIVVRLQGTNAEEGAKIINESGLKVYSAVKLKEAAE 396


>gi|313895288|ref|ZP_07828845.1| succinate-CoA ligase, beta subunit [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976183|gb|EFR41641.1| succinate-CoA ligase, beta subunit [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 396

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 179/401 (44%), Positives = 254/401 (63%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR+Y V V  G+   +V AA    + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREYGVKVPNGLPAFTVDAAVDNAEKLGAPVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    RE+LG TL+T QTGP G  VN + +E+G+ I +E YL
Sbjct: 58  -------GGVKIAKTTDEVRRYARELLGKTLVTHQTGPEGKVVNRLLIEEGSKIKKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  +  + S +GG++IE+VA+++P+KI K  IDP++G+       +   + + 
Sbjct: 111 SFVIDRLSASIVMMGSEEGGVEIEKVAEEHPEKIVKEYIDPVVGLMPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   LY AF  KD S +EINPL++ ++  +  LD+K++FDD+ALYRH DI 
Sbjct: 171 APAVRKASTLMQRLYAAFIGKDCSQVEINPLVVTEDDDVIALDAKLNFDDSALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA  H L+Y+ L G++ CMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 231 ELRDDSEEDPKELEASAHGLNYVNLGGDVACMVNGAGLAMATVDMLKHCGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSAPEKIATAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKLISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V  G  ++  + + NV  A  ++D A++IV  V
Sbjct: 351 VVRLEGTKVTEGREILKNTPIGNVFAAASMEDGAKQIVELV 391


>gi|148244314|ref|YP_001219008.1| succinyl-CoA synthetase beta subunit [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326141|dbj|BAF61284.1| succinyl-CoA synthetase beta subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 386

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 180/396 (45%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK L    ++   KG++I SV  A  A KTL G ++VVK+QIHA         
Sbjct: 1   MHIHEYQAKTLFNHKHIQTPKGILIYSVDQASDACKTLGGSIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +  S++ V +   ++L S LIT QT   G  V+ + +E G +I  E YL
Sbjct: 52  -GGRGKGGGIILCRSIEEVKNACSQLLNSQLITPQTYAKGLPVSQLLIEIGENITHEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            LL+DR +  +  +AST+GGMDIE+VA+  P +I K  I+PL  ++ +D A +   L+L 
Sbjct: 111 GLLIDRQTKKITVLASTKGGMDIEKVARKTPNQIIKFGINPLGHLSVQDCAFMAKKLDLH 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   LY+ F  KD++L+EINPL+I K  +L  LD KI FDDNALYRH DI 
Sbjct: 171 FKFTKQFNNILLGLYEIFTQKDVNLIEINPLVITKENKLLALDGKIDFDDNALYRHKDII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+S+ED +E  A  ++L+YI+L+G IGCMVNGAGLAMATMD+I+ +GG+PANFLDVG
Sbjct: 231 ALRDISQEDEKERLANIYHLNYISLNGTIGCMVNGAGLAMATMDLIEHFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    D+VA AF++I ++ ++KGIL+NIFGGI+ CD++ +GIL A+++V++ +P+V+RLE
Sbjct: 291 GDTTADRVAKAFELIQTEENIKGILVNIFGGIVHCDLIAQGILQAIEKVRLTLPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G +L+ ++ +++ T  DL+ A  KI+   K
Sbjct: 351 GTNATDGLKLLDKAKVDIHTESDLNKATIKIIKLAK 386


>gi|327399556|ref|YP_004340425.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Hippea maritima DSM
           10411]
 gi|327182185|gb|AEA34366.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Hippea maritima DSM
           10411]
          Length = 402

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 182/391 (46%), Positives = 252/391 (64%), Gaps = 12/391 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +L  Y VPV +G V      A      L  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKEVLAGYGVPVPEGRVTYFPDDAWMVSMELGLPV-VLKAQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    +E+ G  L+TKQTGP G ++  + VE  ADI RELY 
Sbjct: 57  -------GGVKIARTSDEVRQIAQELFGKKLVTKQTGPEGVKIRKLLVEKAADIERELYF 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DRT+     IAS +GGM IEEVA+ YP+ I K+ IDP +G     +  L   L+L 
Sbjct: 110 SIVIDRTTSRPTVIASKRGGMSIEEVAEKYPEDIIKIPIDPAVGFLPYQIRRLKYDLDLM 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q + +   +F  LYK F +KD SLLE+NPL+++K+G +  +D+K+  DDNALYR  +I 
Sbjct: 170 AQEK-EAAKIFSALYKVFVEKDCSLLELNPLVVLKSGHMLAVDAKMDIDDNALYRRKEIS 228

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD++E D  E+EA+   L++I L GNIGCMVNGAGLAM TMD+IKL GG PANFLDVG
Sbjct: 229 KMRDLTEVDPDELEARFSGLNFIKLTGNIGCMVNGAGLAMTTMDVIKLAGGDPANFLDVG 288

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +A  F+IIT + SVK I INIFGGI+RCD +  GI+ A+K+V++ IP+V+RL 
Sbjct: 289 GEATPETIAKGFEIITRNPSVKAIFINIFGGIVRCDKVANGIIQALKKVEVKIPVVIRLT 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G N + G  ++ +S L    A DL +AA+ +
Sbjct: 349 GMNKEEGMEILKKSPLKFYIANDLREAAKMV 379


>gi|317484137|ref|ZP_07943067.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
 gi|316924641|gb|EFV45797.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
          Length = 394

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 183/392 (46%), Positives = 245/392 (62%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL  Y VP  +G + ++   AE A + LPGP++VVK+QIHAGGRGK    
Sbjct: 1   MHIHEYQAKRLLSAYGVPTPEGRLAATPGEAEQAARDLPGPVWVVKAQIHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +        +LG+ L+T QTGP G RVN V++E G    RE YL
Sbjct: 57  ------AGGVKVCRSPEEAREAAASLLGARLVTPQTGPDGERVNAVWIERGTASARECYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR S  +  +AS  GGMDIE VA   P+++F   +D    +      +L +   L+
Sbjct: 111 AVALDRASQCLTVMASPGGGMDIEAVAASSPERVFTARLDGGHYLWPFQARNLLEGWGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L   L     +KDM+ LEINPL + + G    LD+K++FDD+AL RH DI 
Sbjct: 171 SGPARELASLVRRLAALATEKDMTQLEINPLALSEGGGFVALDAKMNFDDSALKRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  E D  E  A +  L+Y+ L G+IG +VNGAGLAMATMD IK  G  PANFLD G
Sbjct: 231 ALRDREEGDPLERAAAEKGLTYVRLGGSIGTLVNGAGLAMATMDAIKQAGAEPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ VAA F I+ SD  V+GILINIFGGI+RCD++  GI++A +++ I +PLV+RLE
Sbjct: 291 GGASEETVAAGFSIMLSDPHVRGILINIFGGILRCDIVAHGIVNAARKLDIAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV  G R++ ESGL   TA  + +AA+ IV
Sbjct: 351 GTNVAEGRRILRESGLRFHTASSMSEAARLIV 382


>gi|262276212|ref|ZP_06054021.1| succinyl-CoA ligase [ADP-forming] beta chain [Grimontia hollisae
           CIP 101886]
 gi|262220020|gb|EEY71336.1| succinyl-CoA ligase [ADP-forming] beta chain [Grimontia hollisae
           CIP 101886]
          Length = 388

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 182/384 (47%), Positives = 257/384 (66%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L  +Y +PV++G    +   A  A   L G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFAEYGLPVSEGYACDTPQEAAEAADKLGGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ + +    ++ LG  L+T QT   G  V+ + VE+  DI +ELYL
Sbjct: 58  -------GGVKLVSTKEEIKEFAQKWLGKNLVTYQTDANGQPVSKILVEECTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRQLAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  +   F ++D++L+E+NPL+I + G L  LD+K+S D NA+YR   I+
Sbjct: 171 GDQVKQFTKIFMGIATLFIERDVALVEVNPLVITEQGNLHCLDAKLSIDSNAVYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQDDPREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + +AESGLN+I A  L
Sbjct: 351 GNNAELGAKKLAESGLNIIAATSL 374


>gi|300722388|ref|YP_003711674.1| succinyl-CoA synthetase subunit beta [Xenorhabdus nematophila ATCC
           19061]
 gi|297628891|emb|CBJ89474.1| succinyl-CoA synthetase, beta subunit [Xenorhabdus nematophila ATCC
           19061]
          Length = 388

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEQWLGKRLVTYQTDAQGQPVHQILVEGATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I     L  LD K+S D NA++R  +++
Sbjct: 171 GKQVGQFTKIFLGLANLFLERDLTLVEINPLVITTQDDLICLDGKLSADGNAMFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAAASLTD 376


>gi|157877084|ref|XP_001686874.1| succinyl-CoA ligase [GDP-forming] subunit beta [Leishmania major
           strain Friedlin]
 gi|68129949|emb|CAJ09257.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
           major strain Friedlin]
          Length = 413

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 183/397 (46%), Positives = 255/397 (64%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +++     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKQIIKDNGGRVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  VN +YV +  A I RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTLYVTEAVAGIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    FI S +GGM IEE+AK +P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    LY     KD +++EINP + ++NG +  +D+K+SFDDNA +R   I
Sbjct: 197 AGETTERAAEQIKALYNIGKSKDCTMVEINPFVELENGDVMEIDAKLSFDDNAAFRQRGI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ DS+E+ AK+H+L+YIALDGN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FALEDQTQIDSKEVLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A ++++ AAFKIIT DS+VK IL+NIFGGIM CDV+ +G+++A K +   IP+V+RL
Sbjct: 317 GGSASEEQIVAAFKIITGDSNVKSILVNIFGGIMHCDVIAQGVVNASKALNTTIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I  SGL +    D D AA+K V   K
Sbjct: 377 CGTNEQRGKEIIRNSGLVIHPVEDFDSAARKAVELAK 413


>gi|307946997|ref|ZP_07662332.1| malate--CoA ligase subunit beta [Roseibium sp. TrichSKD4]
 gi|307770661|gb|EFO29887.1| malate--CoA ligase subunit beta [Roseibium sp. TrichSKD4]
          Length = 398

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/396 (43%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  ++VK+QIHAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVEIPAGALAYSPEQAAYRAREMGGEKWIVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +  + + +    + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCADDQEIQAACEAMFGRKLVTHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRTS  +  +AS +GGM+IE+++ + P  I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRTSQRIMIVASAEGGMEIEDISAEKPDSIVRSTVEPAVGLRDFQAREIAFKLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D +++EINPL+I  + R+  LD+K++FD NAL+RH  I 
Sbjct: 171 PGLTQSMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDGNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ +L+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A K
Sbjct: 351 GTNVEEGQKILAKSGLPIIRATTLMEAAERSVSAWK 386


>gi|331000520|ref|ZP_08324192.1| succinate-CoA ligase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329571484|gb|EGG53169.1| succinate-CoA ligase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 388

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 179/393 (45%), Positives = 256/393 (65%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ +L+ ++VPV    V SS   A    + + G ++ VKSQIHAGG       
Sbjct: 1   MKIHEYQARQILKNFDVPVPVAEVASSPEEARKIAEEIGGKIWAVKSQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+ V +  R ++GS L+TKQTGP G+ V+ V V+ G DI++E Y+
Sbjct: 54  ---RGKGGGVKLARSLEDVSNLSRLMIGSRLVTKQTGPAGAPVSKVLVQRGLDIVQEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR       IAS +GGM+IE+VA  +P+KI K +IDP+ G++  +   +   L++ 
Sbjct: 111 GFLIDRKLQRPVLIASAEGGMEIEKVAAQFPEKIIKTVIDPVAGLSVPEALEVATRLDVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D  ++   L+  F   D SLLEINPLI+  + ++  LD K++FDDNAL RH +++
Sbjct: 171 ADIAGDCAEVLRKLWNTFVSMDCSLLEINPLIVTSDKKVYPLDVKMTFDDNALLRHPELE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D  +ED  E+ A +  L YI L+GNI C+VNGAGLAMATMD IKL+GG P NFLD+G
Sbjct: 231 ELHDPEQEDPTELRAHKAGLQYIQLNGNIACLVNGAGLAMATMDTIKLFGGEPDNFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAF+I+ +   VK IL+NIFGGIM+CDV+ +GI+ A + VK+++PL++R++
Sbjct: 291 GGASPEKVTAAFEIMLAQPEVKVILVNIFGGIMKCDVIAEGIVEACRHVKLSVPLIVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G +   G  ++  SGL +I+A  L DAAQK V 
Sbjct: 351 GTHEKEGKEILKNSGLPIISADSLGDAAQKAVE 383


>gi|195491992|ref|XP_002093802.1| GE20552 [Drosophila yakuba]
 gi|194179903|gb|EDW93514.1| GE20552 [Drosophila yakuba]
          Length = 416

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 187/397 (47%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIDKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKSVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|323450948|gb|EGB06827.1| hypothetical protein AURANDRAFT_28673 [Aureococcus anophagefferens]
          Length = 409

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 180/384 (46%), Positives = 259/384 (67%), Gaps = 5/384 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+ A++  + V V  G+  +SV  A +A K L G   V+KSQI AGGRG G F 
Sbjct: 20  LNLHEYQSAAIMASHGVNVPPGIAATSVADAVAAAKELGGDEVVIKSQILAGGRGLGTFT 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV V  S K+      +++G+TL+TKQ+G  G  VN V V +  +++ E+Y 
Sbjct: 80  N---GFQGGVHVIDSAKTA-EYAEKMIGATLVTKQSGAEGKPVNVVMVAEKMNLVNEMYF 135

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR  G    +A  +GG  IE++A+  P+KI K+ ID + G+T  +  ++   L + 
Sbjct: 136 AILLDRAFGGPVVVACAEGGTSIEDLAESSPEKIIKVPIDVVAGLTDANAEAIVAGLGVS 195

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G           +LY+ F   D +++E+NPL     G L   D+KI FDDNA +R  DI 
Sbjct: 196 GDKEA-AKKQIASLYEVFKSCDCTMVEVNPLAEDDQGTLIAADAKIGFDDNAAFRQKDIF 254

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED R++ A++ +L+YI LDG+IGCMVNGAGLAMATMDII+++GG+PANFLDVG
Sbjct: 255 AQRDESQEDPRDVAAEKWDLNYIGLDGSIGCMVNGAGLAMATMDIIQMHGGSPANFLDVG 314

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++++  AFKIITSDS+VK +L+NIFGGIM+CDV+ +GI++ VKEV + IPLV+RLE
Sbjct: 315 GSATKEQIVEAFKIITSDSNVKALLVNIFGGIMKCDVIAEGIVAGVKEVGLEIPLVVRLE 374

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G ++I ESGLN+ +A DL
Sbjct: 375 GTNVELGKKIIDESGLNITSADDL 398


>gi|258592194|emb|CBE68503.1| succinyl-CoA synthetase, beta subunit [NC10 bacterium 'Dutch
           sediment']
          Length = 392

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 182/394 (46%), Positives = 253/394 (64%), Gaps = 11/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHE+QAKA+L  Y VPV KG  +++   A    + L G + V+K+QIHA         
Sbjct: 1   MKIHEFQAKAILGAYEVPVPKGEAVTTPVDAARVAEQLGGAV-VLKAQIHA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   SS +        ++GS L+T QTGP G  V  + VE+   + RELY 
Sbjct: 51  -GGRGKGGGILSASSPQEAEELAERLIGSRLVTHQTGPEGRVVKRILVEEQVAVSRELYA 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     +A   GGM+IEEVA   P+ I ++++DP + + S  +  L   L L 
Sbjct: 110 GIVLDRRAARPVMMAGAIGGMEIEEVAAKDPESITRVVVDPAVQLQSFHIRRLVLRLALP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q +     LF  LY+ F +KD SL+EINPL+I  +GRL  LD+K++ DDNAL+RH D++
Sbjct: 170 QQVQRTATGLFSALYRVFQEKDCSLVEINPLVITTDGRLLALDAKLNVDDNALFRHADLK 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EE   EIEA +  L+YI LDG +GCMVNGAGLAMATMD++K  GG PANFLDVG
Sbjct: 230 ALRDPDEELPLEIEASKFGLNYIKLDGTVGCMVNGAGLAMATMDLVKFVGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +++  AF+I+ SD SV+ +LINIFGGI+RC+ L +G++ AV+ + + +P+V+R+E
Sbjct: 290 GGASAEQIEQAFRILISDRSVRVVLINIFGGILRCERLAEGVIRAVRSLGVTMPIVVRME 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NVD G R++ ESGLN ITA  + DAA+K V A
Sbjct: 350 GTNVDHGTRMLTESGLNFITAEGMQDAAEKAVKA 383


>gi|299139179|ref|ZP_07032355.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8]
 gi|298598859|gb|EFI55021.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8]
          Length = 392

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 193/401 (48%), Positives = 261/401 (65%), Gaps = 13/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LRKY V V  G + +++  A++A K L      + VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRKYGVAVPNGEMATTIEEADAAAKQLFSAGNAVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  SL+      + ILG  L+T QTGP G +V  + VE G+ I RE
Sbjct: 55  ----GGRGKGGGVKLARSLEEAAVYSKSILGMQLVTHQTGPAGQKVQRLLVEAGSAIARE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL L++DR S  V F+AS  GGM+IEEVA + P  IFK  ++P IG+      +L   L
Sbjct: 111 LYLGLVLDRASSKVVFMASQAGGMEIEEVAHENPDAIFKEYVNPAIGLQPYQARALAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+     +       LYKAF + D +L+EINP I  K+G+L  LD KI+FDDNA++RH 
Sbjct: 171 GLEPAQIGEAVRFMLGLYKAFIETDSTLMEINPFITTKDGKLLALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD+SEED  E+EA ++ L+YI LDGNI CMVNGAGLAMATMDII+  GG+ ANFL
Sbjct: 231 DLKELRDLSEEDPLEVEASKYALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGSAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q+++  AF I+ SD +VK I INIFGGI+R DVL   +++A K++ + +P+++
Sbjct: 291 DVGGGANQEQIENAFGILLSDPNVKAIFINIFGGILRVDVLATAVVAAAKKLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           RLEG NV+ G +++AESGL       + +AA   V A KGV
Sbjct: 351 RLEGTNVEEGRKILAESGLKFEVGATMKEAADLAVAAAKGV 391


>gi|300176556|emb|CBK24221.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis]
          Length = 433

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 187/404 (46%), Positives = 259/404 (64%), Gaps = 11/404 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAE----SAIKTLPGPLYVVKSQIHAGGRGK 56
           +NIHE+Q+K L++KY      G V  S   ++          PG  +VVK+Q+ AGGRGK
Sbjct: 32  LNIHEWQSKQLIQKYGGRAQSGEVAYSPERSKDIALQLWNQFPGCKFVVKAQVLAGGRGK 91

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G ++      +GGV++  +   V +  +E++G  LITKQTG  G   N V V     IL+
Sbjct: 92  GHWEN---GMQGGVKLAKTPDEVYAIAQEMIGHKLITKQTGAKGINCNKVMVCGAVKILK 148

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL++L+DR  G    IA++QGGM IEEVA+  P+ +FK+ I    G T E +A L   
Sbjct: 149 EFYLAILLDRAMGCPMIIATSQGGMGIEEVAQKCPECLFKIPISVKNGPTKEQLAKLASD 208

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR----LRVLDSKISFDDNA 232
           L LQG    D       LY  F   D +++EINPL +++       +  LD+K+ FD++A
Sbjct: 209 LGLQGDLAKDCAANVQALYNVFDRCDCTMVEINPLGVIETPTDEQVVCCLDAKLQFDNDA 268

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R  DI  +RD S+ED R++ A    L+YI L+GNIGCMVNGAGLAMATMD I  +GG+
Sbjct: 269 EFRQRDIFAMRDKSQEDPRDVRASMAGLNYIGLEGNIGCMVNGAGLAMATMDTINYFGGS 328

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLDVGG A +++++ A +I+ SD+ VK ILINIFGGIMRCDV+ +GI+ A +E  ++
Sbjct: 329 AANFLDVGGNAKKEQISEALRILRSDAHVKSILINIFGGIMRCDVVAQGIVEAAREAALD 388

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           IPLV+RLEG NV+ G ++I ESGLN+I A DL DAA+K V +VK
Sbjct: 389 IPLVVRLEGTNVEKGKQIIKESGLNIIPADDLGDAAKKAVASVK 432


>gi|24213802|ref|NP_711283.1| succinyl-CoA synthetase subunit beta [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45658411|ref|YP_002497.1| succinyl-CoA synthetase subunit beta [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|73919462|sp|Q72PA2|SUCC_LEPIC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|73919463|sp|Q8F746|SUCC_LEPIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|24194632|gb|AAN48301.1| succinyl-CoA synthetase beta subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601654|gb|AAS71134.1| succinyl-CoA synthetase beta subunit [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 390

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 188/395 (47%), Positives = 250/395 (63%), Gaps = 14/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA----IKTLPGPLYVVKSQIHAGGRGK 56
           M IHEYQAK +LR++   V  GVVI     A  A         G + VVK+QIHA     
Sbjct: 1   MKIHEYQAKEILRRHKANVPFGVVIDKKENASKAHDEVTSKTGGSVVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV+V  + +  I+ + +ILG  LIT QTGP G +V  VY+E G DI +
Sbjct: 56  -----GGRGKGGGVKVTKTKEDAIAAVDKILGMQLITPQTGPEGKKVLKVYLEQGIDIAK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS+L+DR+      +AST+GGM+IEEVA+ +P+KI K+ IDP IG+       L   
Sbjct: 111 EYYLSILLDRSIRKTIIMASTEGGMEIEEVAETHPEKILKIAIDPGIGLQVNQARQLAFE 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L  ++      L   +Y+A+  +D SLLEINPLI+ K   +   D KI  D+NALYRH
Sbjct: 171 LGLPAESHKSFQSLLAAIYEAYIKEDASLLEINPLILTKQNEIIAGDCKIDLDENALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D    RD++EED  E++A + NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANF
Sbjct: 231 ADNAAFRDITEEDPLEVQASEFNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA++  V   FKII  D +VKGI +NIFGGI+RCD++ +GI+ A K V + +PLV
Sbjct: 291 LDVGGGANKTTVTNGFKIILGDPNVKGIFVNIFGGIVRCDMVAEGIIEAAKAVDLKVPLV 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +RL+G N ++G  ++ +SGL +    DL +AA  I
Sbjct: 351 VRLQGTNSELGREVLNKSGLKITGVDDLREAASTI 385


>gi|302795781|ref|XP_002979653.1| hypothetical protein SELMODRAFT_419323 [Selaginella moellendorffii]
 gi|300152413|gb|EFJ19055.1| hypothetical protein SELMODRAFT_419323 [Selaginella moellendorffii]
          Length = 432

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 185/382 (48%), Positives = 252/382 (65%), Gaps = 8/382 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI-KTLP-GPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KG V+SS     + + K  P     VVKSQI AGGRG G 
Sbjct: 39  LNIHEYQGADLMSKYGVNVPKGAVVSSRKEISTVLEKEFPDNEELVVKSQILAGGRGLGT 98

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK      KGGV +    K  + DI  ++LG  L+TKQTGP G  VN V++ +   ++ E
Sbjct: 99  FKN---GLKGGVHIVKRDK--VEDIAGKMLGQILVTKQTGPEGKPVNKVFICEKLQLVNE 153

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y ++ +DR S     IA ++GG  IE++A+ YP  I K+ I+   G+T  D   + + L
Sbjct: 154 MYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPINIHKGITDADAEKVVNGL 213

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+   + D      +LY  FC  D +L+EINPL    +G+L   D+K++FDDNA +R  
Sbjct: 214 NLKCADKNDSMQQVKHLYDLFCKSDCTLVEINPLAETADGKLVAADAKLNFDDNASFRQQ 273

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  LRD S+ED+RE+ A   +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 274 EIFALRDQSQEDAREVAAAAADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGSPANFL 333

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A +++V  AFKI+TSD  VK IL+NIFGGIM+C+V+  GI++A K V + +PL++
Sbjct: 334 DVGGNASENQVIEAFKILTSDKKVKAILVNIFGGIMKCNVIASGIVNAAKTVSLKVPLIV 393

Query: 358 RLEGANVDIGNRLIAESGLNVI 379
           RLEG NVD+G R++ ES +N+I
Sbjct: 394 RLEGTNVDLGKRILKESKMNLI 415


>gi|89073522|ref|ZP_01160045.1| succinyl-CoA synthetase subunit beta [Photobacterium sp. SKA34]
 gi|89050786|gb|EAR56267.1| succinyl-CoA synthetase subunit beta [Photobacterium sp. SKA34]
          Length = 388

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 246/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTPQEAAEAAGKIGGSKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   +    +  LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHETKDGIKQFAQNWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F + D++LLEINPL+I  +  L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFTKIFMGLANMFAEYDLALLEINPLVITGDNNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G   +A+SGLN+I A  L
Sbjct: 351 GNNAEVGAAKLADSGLNIIAATSL 374


>gi|321476532|gb|EFX87492.1| hypothetical protein DAPPUDRAFT_306482 [Daphnia pulex]
          Length = 420

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 184/395 (46%), Positives = 251/395 (63%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K+LL KYNV V K +V   +    S  K  PG  YVVK+QI AGGRG G F 
Sbjct: 30  LNLLEYQSKSLLEKYNVTVQKFIVADKIEDTNSLSKLNPGE-YVVKAQILAGGRGLGVFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +        S + E+L   LITKQT   G  VN V V +  DILRE YL
Sbjct: 89  ---SGFKGGVHLTKDPVKAKSLVGEMLNKRLITKQTPKDGIPVNHVMVAESVDILRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE+VA   P+ I  L +D   GVT +    L + L  +
Sbjct: 146 CILMDREYNGPVIIASPAGGMDIEDVAHKTPELIKTLPVDIFEGVTDQMANDLAEFLLFK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +        NL++ F   D   +EINP +    G++  +D+KI FDDNA +R  +I 
Sbjct: 206 GDLKKKAAQEIKNLWEMFLKVDAVQVEINPFVETPQGQVVSVDAKIGFDDNAKFRQQEIF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D +E D RE+EA ++NL+YI +DGNIGC+VNGAGLAMATMDII+LYG +PANFLDVG
Sbjct: 266 DMEDTTECDPREVEANKYNLNYIGMDGNIGCLVNGAGLAMATMDIIQLYGASPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   + +V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI+ A K +++ +PL++RLE
Sbjct: 326 GTVQEQQVLQAFQILTSDKNVKAILVNVFGGIVNCATIASGIVGACKRIELKVPLIVRLE 385

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ +SGL + +A DLDDAA+K V ++
Sbjct: 386 GTNVDAAKQILKDSGLPIQSASDLDDAAKKAVASI 420


>gi|121999019|ref|YP_001003806.1| succinyl-CoA synthetase subunit beta [Halorhodospira halophila SL1]
 gi|189030207|sp|A1WZ92|SUCC_HALHL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|121590424|gb|ABM63004.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Halorhodospira
           halophila SL1]
          Length = 391

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 194/394 (49%), Positives = 264/394 (67%), Gaps = 12/394 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  +  + + +G V  S   A +A + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKHLFTEAGIAIPRGYVARSSAEARAAAERLGGSAWVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV      +      +LG  L+T QT   G  ++ + VE+G +I RELYL
Sbjct: 57  ------AGGVRVIQEGDEIERYADSLLGERLVTHQTDGRGQPIHALLVEEGLEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR S  V F+ S  GGMDIEEVA   P++I  + + P  G+       L   L L 
Sbjct: 111 GALVDRASQRVVFMVSAAGGMDIEEVAASEPERIHTVRVHPAAGLQPYQCRQLGFALGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY--RHLD 238
                D   +   LY+ F ++D+SL+EINPLI+   GRL  LD+K++ DDNA+   R   
Sbjct: 171 KAQVGDLTRMMQGLYRLFLERDLSLVEINPLIVTGEGRLLALDAKVTVDDNAVEIGRQSQ 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQ++RD+++ED  E+ A +HNL+YI LDGNIGCMVNGAGLAMATMD+IKL+GGAPANFLD
Sbjct: 231 IQDMRDLTQEDETEVRAAEHNLNYITLDGNIGCMVNGAGLAMATMDVIKLHGGAPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG + ++VA AFKII S  SV+GIL+NIFGGI+RCD++ +GI++AV++V + +P+V+R
Sbjct: 291 VGGGTNAERVAEAFKIILSSPSVEGILVNIFGGIVRCDMIAEGIVAAVQDVGVEVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           LEG NV+ G +++A+SGL++I A DL DAA KIV
Sbjct: 351 LEGTNVEQGKQILADSGLDLIPADDLADAAAKIV 384


>gi|90580056|ref|ZP_01235864.1| succinyl-CoA synthetase subunit beta [Vibrio angustum S14]
 gi|90438941|gb|EAS64124.1| succinyl-CoA synthetase subunit beta [Vibrio angustum S14]
          Length = 388

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 246/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTPQQAAEAAGKIGGSKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   +    +  LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHETKDGIKQFAQNWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F + D++LLEINPL+I  +  L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFTKIFMGLANMFAEYDLALLEINPLVITGDNNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G   +A+SGLN+I A  L
Sbjct: 351 GNNAEVGAAKLADSGLNIIAATSL 374


>gi|320168660|gb|EFW45559.1| Suclg2 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 424

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 184/400 (46%), Positives = 253/400 (63%), Gaps = 8/400 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL---YVVKSQIHAGGRGKG 57
           +N+HEYQ+K LL    V   +  V  +   A+   + L       +V+K+QIHAGGRGKG
Sbjct: 28  LNLHEYQSKELLAAAGVTTQRFKVAKTPAEAKDIAQWLKSNSVHEFVIKAQIHAGGRGKG 87

Query: 58  RFKELPADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            F    +  KGGV++     +V+ D+  +++G  L+TKQT P G  VN + V +  DI  
Sbjct: 88  TFS---SGFKGGVQLTKD-PNVVGDLASKMIGYNLVTKQTPPAGVPVNKLMVAEALDIAS 143

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y ++++DR S     +AS QGG+DIEEVA   P+ IFK  +   +GVTSE    L   
Sbjct: 144 EKYFAIVLDRESQGPVLVASPQGGVDIEEVAAKTPELIFKEPVKIAVGVTSEQALRLAKN 203

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L   G       D    LY  F   D S +EINP+    +GR+   D+K++ DDNA +R 
Sbjct: 204 LGFTGAKATSAADQIRRLYDLFIKNDASQVEINPMGETPDGRVVCFDAKVNIDDNAEFRQ 263

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             + E RD +E+D RE+EA +  L+Y+ ++GNIGC+VNGAGLAMATMDIIKL+GG PANF
Sbjct: 264 KTLFEQRDTTEDDPREVEATKAGLNYVGMEGNIGCLVNGAGLAMATMDIIKLFGGQPANF 323

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG   + +VA AFKIITSD  VK +L+NIFGGI+ C  +  GI++A K   +++PLV
Sbjct: 324 LDVGGSVKEAQVAQAFKIITSDPQVKALLVNIFGGIVNCATIANGIVAACKTTNLSLPLV 383

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NVD   +++ ESGL +ITA +L+DAAQK V A+K
Sbjct: 384 VRLEGTNVDNAKKILKESGLPIITAENLNDAAQKAVAALK 423


>gi|255261379|ref|ZP_05340721.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
 gi|255103714|gb|EET46388.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
          Length = 396

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 169/396 (42%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVEIPAGALAYSPEQAAYRAREMGGEKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +   ++ G  L+T QTG  G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCDTDHEIQATCEDMFGKKLVTHQTGLEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  +  +AS +GGM+IEE++++ P+ I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRTTQRIMIVASAEGGMEIEEISENKPESIVRSTVEPAVGLRDFQARDIAFKLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PSLTQSMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+G+IGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLEGSIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ +L+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPIIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A K
Sbjct: 351 GTNVEEGQKILAKSGLPIIRATTLMEAAERSVSAWK 386


>gi|290474109|ref|YP_003466986.1| succinyl-CoA synthetase subunit beta [Xenorhabdus bovienii SS-2004]
 gi|289173419|emb|CBJ80196.1| succinyl-CoA synthetase, beta subunit [Xenorhabdus bovienii
           SS-2004]
          Length = 388

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 182/386 (47%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEQWLGKRLVTYQTDAQGQPVHQILVEGATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLAGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F ++D++++EINPL+I   G L  LD K+  D NA++R  +++
Sbjct: 171 SKQVGQFTKIFMGLAKLFLERDLAMVEINPLVITTQGDLICLDGKLGADGNAMFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAASSLTD 376


>gi|21356231|ref|NP_651963.1| sucb, isoform A [Drosophila melanogaster]
 gi|6634118|emb|CAB64384.1| putative succinyl-coa ligase (GDP-forming) beta-chain precursor
           [Drosophila melanogaster]
 gi|7295455|gb|AAF50771.1| sucb, isoform A [Drosophila melanogaster]
 gi|15292271|gb|AAK93404.1| LD44970p [Drosophila melanogaster]
 gi|220946348|gb|ACL85717.1| Sucb-PA [synthetic construct]
 gi|220956042|gb|ACL90564.1| Sucb-PA [synthetic construct]
          Length = 416

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 186/397 (46%), Positives = 261/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+++  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + ++   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|154422173|ref|XP_001584099.1| adhesin protein AP51-3 [Trichomonas vaginalis G3]
 gi|121918344|gb|EAY23113.1| adhesin protein AP51-3, putative [Trichomonas vaginalis G3]
          Length = 409

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 178/397 (44%), Positives = 252/397 (63%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  K+NV     VV  +   A +A K +  P  V+K+Q++ GGRGKG +K
Sbjct: 12  FNILEWQSKEICAKFNVAAGINVVARTPEEAAAAFKKIGLPAAVIKAQVYCGGRGKGHWK 71

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 72  E--TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYF 129

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L 
Sbjct: 130 AILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKIHKFVLDGVQGITEEVAQTISKKLGLT 189

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 190 GKAYENGVEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+G
Sbjct: 250 GYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V   F II+S S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 310 GAASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLE 369

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +L+ ESGL +I A +L DA  K V A  G
Sbjct: 370 GTNVDAGKKLLRESGLPIIPADNLTDAGIKAVKAANG 406


>gi|146103993|ref|XP_001469702.1| succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania infantum]
 gi|134074072|emb|CAM72814.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
           infantum JPCM5]
 gi|322503662|emb|CBZ38748.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 413

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 183/397 (46%), Positives = 254/397 (63%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +++     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKQIIKDNGGRVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  VN +YV +  A I RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTLYVTEAVAGIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    FI S +GGM IEE+AK +P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    LY     KD +++EINP + ++NG +  +D+K+SFDDNA +R   I
Sbjct: 197 AGETAERAAEQIKALYNIGKSKDCTMVEINPFVELENGDVMEIDAKLSFDDNAAFRQRGI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ DS+E+ AK+H+L+YIALDGN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FALEDQTQIDSKEVLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A + ++ AAFKIIT DS+VK IL+NIFGGIM CDV+ +G+++A K +   IP+V+RL
Sbjct: 317 GGSASEAQIVAAFKIITGDSNVKSILVNIFGGIMHCDVIAQGVVNASKALNTTIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I  SGL +    D D AA+K V   K
Sbjct: 377 CGTNEQRGKEIIRNSGLVIHPVEDFDSAARKAVELAK 413


>gi|195587980|ref|XP_002083739.1| GD13190 [Drosophila simulans]
 gi|194195748|gb|EDX09324.1| GD13190 [Drosophila simulans]
          Length = 416

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 186/397 (46%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + ++   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIDKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|94676823|ref|YP_588570.1| succinyl-CoA synthetase, beta subunit [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|189046887|sp|Q1LTZ4|SUCC_BAUCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94219973|gb|ABF14132.1| succinyl-CoA synthetase, beta subunit [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 393

 Score =  342 bits (877), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 182/398 (45%), Positives = 257/398 (64%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK L  +Y +P+ KG+V ++ + A+ +I  +    ++VK Q+HAGGRGK    
Sbjct: 1   MKLHEYQAKMLFAQYGIPIPKGLVCTTPNEAKESIAVIGYGPWIVKCQVHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S + +    ++  G  LIT+QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVRIVRSKEEIQEFAKQWFGKHLITEQTNHIGQPVSKILVEAAIDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR++  + FIAS QGG+DIE +AK+ P  + ++++DPLIG        L   + L 
Sbjct: 111 GCLVDRSNQCIKFIASIQGGIDIENIAKEKPHLLHQIILDPLIGPQLYQSRDLAFKIGLS 170

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            + +I+    +F  L   F +KD+ + EINPL+I + G L  LD K+  D NAL+R  ++
Sbjct: 171 SKKQINQFNKIFMGLATLFLEKDLVMAEINPLVITRLGDLICLDGKLHVDSNALFRQPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++ D S+ED  E  AKQHNL+YIAL+GNIGC+VNGAGLAM+T+D++K YGG PANFLDV
Sbjct: 231 CKMLDPSQEDKCETYAKQHNLNYIALNGNIGCLVNGAGLAMSTIDMVKFYGGEPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   Q+KV  AF+II SD  VK IL+NIFGGI+ CDV+ KGI++A  E  INIP+++RL
Sbjct: 291 GGRVTQEKVTKAFQIILSDKKVKVILVNIFGGIVCCDVIAKGIINARLESGINIPVIVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N   G + +  S LN+  A +L  AA++ V  V+G
Sbjct: 351 EGNNAKQGIQHLVNSILNIRIATNLTTAAKQAVALVEG 388


>gi|303256571|ref|ZP_07342585.1| succinyl-CoA synthase, beta subunit [Burkholderiales bacterium
           1_1_47]
 gi|302860062|gb|EFL83139.1| succinyl-CoA synthase, beta subunit [Burkholderiales bacterium
           1_1_47]
          Length = 388

 Score =  342 bits (877), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 255/393 (64%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ +L+ ++VPV    V SS   A    + + G ++ VKSQIHAGG       
Sbjct: 1   MKIHEYQARQILKNFDVPVPVAEVASSPEEARKIAEEIGGKIWAVKSQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  + ++GS L+TKQTGP G+ V+ V V+ G DI++E Y+
Sbjct: 54  ---RGKGGGVKLARSLDDVSNLSKLMIGSRLVTKQTGPAGAPVSKVLVQQGLDIVQEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR       IAS +GGM+IE+VA  +P+KI K +IDP+ G++  +   +   L++ 
Sbjct: 111 GFLIDRKLQKPVLIASAEGGMEIEKVAAQFPEKIIKTVIDPVAGLSVPEALEVATRLDVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D  ++   L+  F   D SLLEINPLI+  + ++  LD K++FDDNAL RH +++
Sbjct: 171 ADIAGDCAEVLRKLWNTFVSMDCSLLEINPLIVTSDKKVYPLDVKMTFDDNALLRHPELE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D  +ED  E+ A +  L YI L+GNI C+VNGAGLAMATMD IKL+GG P NFLD+G
Sbjct: 231 ELHDPEQEDPTELRAHKAGLQYIQLNGNIACLVNGAGLAMATMDTIKLFGGEPDNFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAF+I+ +   VK IL+NIFGGIM+CDV+ +GI+ A + VK+++PL++R++
Sbjct: 291 GGASPEKVTAAFEIMLAQPEVKVILVNIFGGIMKCDVIAEGIVEACRHVKLSVPLIVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G +   G  ++  SGL +I+A  L DAAQK V 
Sbjct: 351 GTHEKEGKEILKNSGLPIISADSLGDAAQKAVE 383


>gi|225874174|ref|YP_002755633.1| succinyl-CoA synthase, beta subunit [Acidobacterium capsulatum ATCC
           51196]
 gi|254778423|sp|C1F2F2|SUCC_ACIC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|225792495|gb|ACO32585.1| succinyl-CoA synthase, beta subunit [Acidobacterium capsulatum ATCC
           51196]
          Length = 391

 Score =  342 bits (877), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 183/389 (47%), Positives = 248/389 (63%), Gaps = 13/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +L KY V V +G V +++  A    K L        VVK+QIHA      
Sbjct: 1   MKIHEYQAKDILAKYGVAVPRGEVANTLEEAMDVAKRLFAEGAKGVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  +L+      ++ILG  L+T QTGP G +V  + +E+ A I RE
Sbjct: 55  ----GGRGKGGGVKVAKTLEEAEQYAKQILGMQLVTHQTGPQGQKVQRLLIEETAAIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL +++DR +  + F+AS  GGM+IEEVA   P  IFK  IDP +G  +     L   L
Sbjct: 111 LYLGIVLDRAAAKLVFMASQAGGMEIEEVAAKDPSAIFKAYIDPAVGFQAYQARQLAFAL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+     D       LYKA+ D D SLLEINP I  K+ +L  LD KI+FDDNA++RH 
Sbjct: 171 GLKPTQINDAVKFMMGLYKAYMDTDASLLEINPFITTKDDKLFALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD++EED  E+EA ++ L+YI LDGNI CMVNGAGLAMATMDII+  GG PANFL
Sbjct: 231 DLKELRDIAEEDPLEVEASKYALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGMPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q ++  AF+I+ SD +V+ + INIFGGI+R D L  G++ A +++ + +P+V+
Sbjct: 291 DVGGGANQQQIEHAFEILLSDKNVQAVFINIFGGILRVDTLAHGVVGAAQKLNVKVPIVL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDD 386
           RLEG NV+ G +++ +SGLN I    + D
Sbjct: 351 RLEGTNVEEGRKILKDSGLNFIVGDTMQD 379


>gi|300024657|ref|YP_003757268.1| succinyl-CoA synthetase subunit beta [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526478|gb|ADJ24947.1| succinyl-CoA synthetase, beta subunit [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 387

 Score =  342 bits (876), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 184/399 (46%), Positives = 253/399 (63%), Gaps = 17/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL K+ VP+A+G +  S   A      L G + VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLAKFGVPIARGGLAYSPEQATYRASELGGTV-VVKAQIHSGARGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + K +      +LG  L+T QTG  G  V+ +Y+E+  +I RE+YL
Sbjct: 57  -------GGVKVCKTEKEIEDAAEFMLGRKLVTHQTGSAGKLVSRLYIEEATNIDREIYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS  GGMDIEE++   P  I ++ +DP +G+       L   L + 
Sbjct: 110 GFVMDRASERIVVVASAAGGMDIEEISASQPDTIIRVAVDPAVGMQQFQARELAFGLGVD 169

Query: 181 GQARIDGGDLFPNL---YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            +       L P +   Y+AF D D  ++EINPL+I K  ++  LD+K+SFDDNAL+R  
Sbjct: 170 PEIV---NKLVPAIMGCYRAFRDLDAMMVEINPLVITKEKQVVALDAKMSFDDNALFRRP 226

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I ELRD S+ED RE  A    LSY+ LDG+IGC+VNGAGLAMAT+D+IKL GG PANFL
Sbjct: 227 HIAELRDKSQEDPRETYASDRGLSYVGLDGDIGCIVNGAGLAMATLDMIKLAGGEPANFL 286

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGA  ++V  +FK +  D +VK IL+N+F GI RCD + KG++ AVKE+ I +P+V+
Sbjct: 287 DIGGGASPERVTKSFKAVLRDKNVKAILVNVFAGINRCDWVAKGVVDAVKELDIKLPIVV 346

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G NV+ G ++I  SGL VI+A  L DAA++ V A K
Sbjct: 347 RLAGTNVEEGRKIIDNSGLTVISAETLADAAKQAVEAAK 385


>gi|325954308|ref|YP_004237968.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Weeksella virosa
           DSM 16922]
 gi|323436926|gb|ADX67390.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Weeksella virosa
           DSM 16922]
          Length = 396

 Score =  342 bits (876), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 188/402 (46%), Positives = 255/402 (63%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQAK +L KY V V +G+V ++    V AA+   K      +VVK+QIHA     
Sbjct: 1   MNLHEYQAKQILSKYGVKVQRGIVATTPDEAVEAAQELTKETGTSWHVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL+ V     +I+G  LIT QT P G +VN V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLEEVKEKATDIIGMQLITPQTPPEGKKVNQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              + E Y+S+L++R +G   F+ ST+GGMDIE VA+  P+KIF   IDP +G+T    A
Sbjct: 111 ESEIEEFYVSVLLNRATGRNMFMYSTEGGMDIEAVAEATPEKIFTEEIDPAVGLTGFQAA 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L ++G A  D       LY A+   D SL EINP++   + ++  +D+K+  D N
Sbjct: 171 NIAFNLGVKGAAYKDMIKFIHALYNAYIGIDASLFEINPVLKTSDDQIMAVDAKVVLDGN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+ ELRD  EED  E+EA    L+++ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALFRHKDLAELRDTREEDPTEVEADAAGLNFVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD ++V  AF+II  DS+VKGIL+NIFGGI+RCD + +GIL A K +  
Sbjct: 291 NPANFLDVGGTADAERVEKAFRIILKDSNVKGILVNIFGGIVRCDRVAQGILDAYKNLGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            IN+P+++RL+G N DI  ++I+ESGL V     L DAA K+
Sbjct: 351 SINVPIIVRLQGTNADIARQMISESGLQVHAVDTLQDAADKV 392


>gi|194750237|ref|XP_001957534.1| GF10458 [Drosophila ananassae]
 gi|190624816|gb|EDV40340.1| GF10458 [Drosophila ananassae]
          Length = 416

 Score =  342 bits (876), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 195/400 (48%), Positives = 261/400 (65%), Gaps = 12/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +K+   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADADVVKSFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S    V+S   +++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSDKSEVLSLSHKMIGNRLITKQTPKSGILVNKVMVARSVNITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI--FKLLID-PLIGVTSEDVASLCDML 177
            +L+DR       IAS  GGMDIE VA++ P+KI    L ID P+   T  +VA     L
Sbjct: 140 CILLDREHMGPVLIASPAGGMDIEAVAEETPEKIKTVPLNIDKPIPEATLIEVAKF---L 196

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           E +G A     D    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  
Sbjct: 197 EFKGDAVKRCADEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQK 256

Query: 238 DIQELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           DI  + D++EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PAN
Sbjct: 257 DIFNM-DITEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPAN 315

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGG  +D+VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PL
Sbjct: 316 FLDVGGGVKEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPL 375

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           V+RLEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 376 VVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|77360586|ref|YP_340161.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123588173|sp|Q3IGW5|SUCC_PSEHT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|76875497|emb|CAI86718.1| succinyl-CoA synthetase, beta subunit [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 388

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 188/386 (48%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGYACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PVQMKQFVKIFMGLGKMFTDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+EDSRE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDSREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++  SGL++I A  L D
Sbjct: 351 GTNAELGREVLKNSGLDIIAAESLTD 376


>gi|2351689|gb|AAB68611.1| adhesin protein AP51-3 [Trichomonas vaginalis]
          Length = 405

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 178/397 (44%), Positives = 252/397 (63%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  K+NV     VV  +   A +A K +  P  V+K+Q++ GGRGKG +K
Sbjct: 8   FNILEWQSKEICAKFNVAAGINVVARTPEEAAAAFKKIGLPAAVIKAQVYCGGRGKGHWK 67

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 68  E--TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYF 125

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L 
Sbjct: 126 AILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKIHKFVLDGVQGITEEVAQTISKKLGLT 185

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 186 GKAYENGVEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 245

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+G
Sbjct: 246 GYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLG 305

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V   F II+S S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 306 GAASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVRAGVIAAFKKVGLKVPLVVRLE 365

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +L+ ESGL +I A +L DA  K V A  G
Sbjct: 366 GTNVDAGKKLLRESGLPIIPADNLTDAGIKAVKAANG 402


>gi|53804668|ref|YP_113446.1| succinyl-CoA synthase subunit beta [Methylococcus capsulatus str.
           Bath]
 gi|53758429|gb|AAU92720.1| succinyl-CoA synthase, beta subunit [Methylococcus capsulatus str.
           Bath]
          Length = 386

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 189/386 (48%), Positives = 253/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL  Y VPV +G V  S   A S    + G  + VK+Q+H+GGRGK    
Sbjct: 1   MNLHEYQSKRLLADYGVPVPRGGVAFSPDEARSCALQIGGERWAVKAQVHSGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   V +    +LGS L+T Q+G  G  V+ V VE+   I RE+YL
Sbjct: 57  ------AGGVKLCSSEDEVAAAAHALLGSELVTSQSGGKGLPVHAVLVEEVRGIAREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+S  + F+AS +GGMDIE VA   P+KI    I P  G        +   L L 
Sbjct: 111 SVLVDRSSATIMFLASGEGGMDIEAVAAGSPEKILSSRIHPAAGFQPYQGRDIGYALGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   +Y+ F +KD+S +EINPLI+   G L  LD+KI  DDNAL+ H ++ 
Sbjct: 171 AAQIGTLVRLMAGMYRLFVEKDLSQIEINPLIVTAEGELLALDAKIGIDDNALFAHPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED+RE  A++H LSY+ L GNIGCMVNGAGLAMATMD++KL+GG PANFLDVG
Sbjct: 231 GLRDASQEDARENAAREHGLSYVTLGGNIGCMVNGAGLAMATMDMVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KVA AFK+I SDS V+ +L+NIFGGI+RCD++ +G+++AV+EV++ +P+V+RLE
Sbjct: 291 GGATAEKVAEAFKLILSDSGVRAVLVNIFGGIVRCDLIAEGLIAAVREVRVGVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+  SGL +I A +LD+
Sbjct: 351 GTNAGEGRALLERSGLAIIAADELDE 376


>gi|315638488|ref|ZP_07893665.1| succinyl-CoA synthase [Campylobacter upsaliensis JV21]
 gi|315481479|gb|EFU72106.1| succinyl-CoA synthase [Campylobacter upsaliensis JV21]
          Length = 387

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 187/390 (47%), Positives = 245/390 (62%), Gaps = 11/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+  +  V   KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFAENGVATLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V S   +ILG TL+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKSLDEVKSYAEQILGMTLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKLFHALEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD++LYRH DI 
Sbjct: 171 KDEGKKLAAMIEKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSSLYRHSDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ALRDITEENDAEREAGEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++N+P+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNVPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           G N      ++  S L N+  A  L + A+
Sbjct: 351 GTNAAEAKSILDNSNLKNIKAATSLKEGAE 380


>gi|254569344|ref|XP_002491782.1| Beta subunit of succinyl-CoA ligase, which is a mitochondrial
           enzyme of the TCA cycle [Pichia pastoris GS115]
 gi|238031579|emb|CAY69502.1| Beta subunit of succinyl-CoA ligase, which is a mitochondrial
           enzyme of the TCA cycle [Pichia pastoris GS115]
 gi|328351718|emb|CCA38117.1| succinyl-CoA synthetase beta subunit [Pichia pastoris CBS 7435]
          Length = 412

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 181/398 (45%), Positives = 253/398 (63%), Gaps = 7/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR Y+VPV +G    S   A    + L     V+K+Q   GGRGKG F 
Sbjct: 20  LSIHEYRSADLLRAYDVPVPRGGAADSPEEAYKIAQNLHSDGLVIKAQALTGGRGKGHF- 78

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++ S+ + V     ++L   LITKQ+G  G  V+ VYV +  D + E 
Sbjct: 79  ----DSGLQGGVKLVSTPEEVRDLAGQMLQHNLITKQSGAAGKLVSAVYVVERKDAVHEA 134

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++LVDR S   A + S+QGGMDIE VA   P  I    ID   GVT    A +   L 
Sbjct: 135 YLAILVDRVSQKPAIVVSSQGGMDIEGVAAKDPSAIKTFPIDLKTGVTDSLAAEIASNLG 194

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              +A+++  D    LY+ F +KD + +EINPL  +    +  +D+K  FDD+AL+RH D
Sbjct: 195 FSPEAQVNAQDSIKKLYQIFMEKDATQIEINPLSEVSGNEVLCMDAKFGFDDSALFRHSD 254

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           ++  RD ++ED+ E+EA +  L++I LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLD
Sbjct: 255 VESWRDPTQEDADEVEAGKWGLNFIKLDGNIGCLVNGAGLAMATMDIIKLYGGEPANFLD 314

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AF++I ++  VKGI +NIFGGI+RCD + +G+++A K + ++IP+V+R
Sbjct: 315 CGGGATPESIEKAFRLILTEDKVKGIFVNIFGGIVRCDYVAQGLIAATKSLDLSIPVVVR 374

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L G N+    +LI ESGL + +  DLD AA+KIV   K
Sbjct: 375 LNGTNLSQAEKLIEESGLKLYSFKDLDPAAEKIVELTK 412


>gi|123412039|ref|XP_001303981.1| adhesin protein AP51-2 [Trichomonas vaginalis G3]
 gi|121885402|gb|EAX91051.1| adhesin protein AP51-2, putative [Trichomonas vaginalis G3]
          Length = 409

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 178/397 (44%), Positives = 252/397 (63%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  K+NV     +V  +   A +A K +  P  V+K+Q++ GGRGKG +K
Sbjct: 11  FNILEWQSKEICAKFNVAAGINLVARTPEEAAAAFKKMGLPAAVIKAQVYCGGRGKGHWK 70

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 71  E--TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGADGLLCQAVMLSDPVEVKRELYF 128

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K  +D + G+T +   ++   L L 
Sbjct: 129 AILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKILKFQLDGVEGITRDVAVNISKQLGLT 188

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 189 GKAYENGIEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 248

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+G
Sbjct: 249 GYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLG 308

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +  V   F II+S S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 309 GGASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLE 368

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +LI ESGL +I A +L DA  K V A  G
Sbjct: 369 GTNVDAGKKLIRESGLPIIPADNLTDAGIKAVKAANG 405


>gi|315126693|ref|YP_004068696.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas sp. SM9913]
 gi|315015207|gb|ADT68545.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas sp. SM9913]
          Length = 388

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 187/386 (48%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSQGFACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFVKIFMGLGNMFNDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A+S LN+I A  L D
Sbjct: 351 GTNAELGREVLAKSDLNIIAAESLTD 376


>gi|302807299|ref|XP_002985362.1| hypothetical protein SELMODRAFT_122224 [Selaginella moellendorffii]
 gi|300146825|gb|EFJ13492.1| hypothetical protein SELMODRAFT_122224 [Selaginella moellendorffii]
          Length = 432

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 184/382 (48%), Positives = 252/382 (65%), Gaps = 8/382 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI-KTLP-GPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KG V+SS     + + K  P     VVKSQI AGGRG G 
Sbjct: 39  LNIHEYQGADLMSKYGVNVPKGAVVSSRKEISTVLEKEFPDNEELVVKSQILAGGRGLGT 98

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK      KGGV +    K  + +I  ++LG  L+TKQTGP G  VN V++ +   ++ E
Sbjct: 99  FKN---GLKGGVHIVKRDK--VEEIAGKMLGQILVTKQTGPEGKPVNKVFICEKLQLVNE 153

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y ++ +DR S     IA ++GG  IE++A+ YP  I K+ I+   G+T  D   + + L
Sbjct: 154 MYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPINIHKGITDADAEKVVNGL 213

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+   + D      +LY  FC  D +L+EINPL    +G+L   D+K++FDDNA +R  
Sbjct: 214 NLKCADKNDSMQQVKHLYDLFCKSDCTLVEINPLAETADGKLVAADAKLNFDDNASFRQQ 273

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  LRD S+ED+RE+ A   +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 274 EIFALRDQSQEDAREVAAAAADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGSPANFL 333

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A +++V  AFKI+TSD  VK IL+NIFGGIM+C+V+  GI++A K V + +PL++
Sbjct: 334 DVGGNASENQVIEAFKILTSDKKVKAILVNIFGGIMKCNVIASGIVNAAKTVSLKVPLIV 393

Query: 358 RLEGANVDIGNRLIAESGLNVI 379
           RLEG NVD+G R++ ES +N+I
Sbjct: 394 RLEGTNVDLGKRILKESKMNLI 415


>gi|290982641|ref|XP_002674038.1| succinyl-CoA synthetase beta sub-unit [Naegleria gruberi]
 gi|284087626|gb|EFC41294.1| succinyl-CoA synthetase beta sub-unit [Naegleria gruberi]
          Length = 430

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 190/410 (46%), Positives = 265/410 (64%), Gaps = 22/410 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           +NIHEYQAK L ++++VP  +G+ I ++ A  + +  L        ++VKSQI AGGRGK
Sbjct: 29  LNIHEYQAKELFKQFDVPHQRGITIDNLEAIPATLAQLKTETGTKNFIVKSQILAGGRGK 88

Query: 57  GRFKELPADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           G F E     +GGV+   + + V +D+  ++LG+TL+TKQTG  G +V+ ++  +  D  
Sbjct: 89  GSFIE--NGFQGGVKFTKN-EQVAADVASKMLGNTLVTKQTGEKGIKVDKLFFAECLDFN 145

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           RE Y ++L+DR +    F+ S +GGMDIE+VA++ P+ I  LLI  L     E+  +L D
Sbjct: 146 REFYFAILLDRAAQCPVFVGSYEGGMDIEQVAEEKPEAIKTLLIRDL-----ENGPTLAD 200

Query: 176 MLE----LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN-GRLRVLDSKISFDD 230
             E    LQ +       +   LY  F   D + LEINPL+ + N   L  +D K++ DD
Sbjct: 201 ATEYAKELQFKKPEQAAQIMKKLYTMFRKTDAAQLEINPLVELDNTADLSCVDCKLNIDD 260

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA +R  +I  +RD + ED RE+EA +  L+YI LDGNIGC+VNGAGLAMATMDII+L+G
Sbjct: 261 NAAFRQANIFAMRDWAAEDPREVEAAKCELNYIGLDGNIGCLVNGAGLAMATMDIIQLHG 320

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           GAPANFLDVGGGA  ++V  AF II  D SVK +L+NIFGGIMRCDV+ +GI+ A +E+ 
Sbjct: 321 GAPANFLDVGGGATTNQVKQAFTIILKDESVKCVLVNIFGGIMRCDVIAEGIVQAARELG 380

Query: 351 INIPLVMRLEGANVDIGNRLIAESG----LNVITAIDLDDAAQKIVHAVK 396
           + IP+V+RL G NVD G +++ E+     L VI A DLDDAA K V  +K
Sbjct: 381 VRIPIVVRLAGTNVDKGLQILEEAAKTGTLKVIAAKDLDDAAIKSVAQLK 430


>gi|195337663|ref|XP_002035448.1| GM13912 [Drosophila sechellia]
 gi|194128541|gb|EDW50584.1| GM13912 [Drosophila sechellia]
          Length = 416

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 185/397 (46%), Positives = 259/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDILQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + ++   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPDKIKTVPLDIDKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTATDLDDAAHKAVAAL 415


>gi|322490883|emb|CBZ26147.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 413

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 182/397 (45%), Positives = 256/397 (64%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +L+     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKQILKDNGGRVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  VN +YV +  A I RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTLYVTEAVAGIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    FI S +GGM IEE+AK +P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    +Y     KD +++EINP + ++NG +  +D+K+SFDDNA++R   I
Sbjct: 197 SGETAERAAEQIKAIYNIGKSKDCTMVEINPFVELENGDVMEIDAKLSFDDNAVFRQRGI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ DS+E+ AK+H+L+YIALDGN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FALEDQTQIDSKEVLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A + ++ AAFKIIT D++VK IL+NIFGGIM CDV+ +G+++A K +  +IP+V+RL
Sbjct: 317 GGSASEAQIVAAFKIITGDANVKSILVNIFGGIMHCDVIAQGVVNASKVLNTSIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I  SGL +    D D AA+K V   K
Sbjct: 377 CGTNEQRGKDIIRNSGLVIHPVEDFDSAARKAVELAK 413


>gi|322818641|gb|EFZ25991.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           cruzi]
          Length = 418

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 177/388 (45%), Positives = 260/388 (67%), Gaps = 5/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NIHEYQ+KA+L++       G+   ++   E+A+  +     VVKSQI AGGRG G F+
Sbjct: 21  FNIHEYQSKAILKEGGCKTEFGIPCRTLEEVEAALGKIKTEKKVVKSQILAGGRGMGTFE 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     KGGV V  +    +   +++L  TL+TKQTGP G RVN +YV +    I RELY
Sbjct: 81  D---GFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTGPKGQRVNLLYVTEAVTGIKRELY 137

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +    FI S +GGM IEE+A+  P+KI ++ I+   G++ ++  +    L  
Sbjct: 138 LALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKRMRINVQEGISHDNCVAFAKELGF 197

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A  +  +    LY     KD + +EINPL+ ++NG +  +D+K+SFDDNA +R  DI
Sbjct: 198 SGRASENAAEQVKALYNVGKSKDCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDI 257

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I + GG PANFLDV
Sbjct: 258 FSLADDTQIDPKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDV 317

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMR 358
           GG A ++++ AAF+IIT D  VKGIL+NIFGGIMRCD++ +GI++A +E+K  NIP+V+R
Sbjct: 318 GGSATREQIVAAFQIITGDEKVKGILVNIFGGIMRCDIIAEGIVAASRELKGRNIPVVVR 377

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           L G+  + G R++ ESGL +  A + ++
Sbjct: 378 LSGSKEEEGKRILQESGLPLHPARNFEE 405


>gi|268317249|ref|YP_003290968.1| succinyl-CoA synthetase, beta subunit [Rhodothermus marinus DSM
           4252]
 gi|262334783|gb|ACY48580.1| succinyl-CoA synthetase, beta subunit [Rhodothermus marinus DSM
           4252]
          Length = 395

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 188/406 (46%), Positives = 257/406 (63%), Gaps = 22/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           M +HEYQAK +L++Y V    G V  +V  A  A + L       L+VVK+QIHAGGRGK
Sbjct: 1   MKLHEYQAKDILQRYGVATQPGYVARTVEEAVEAARRLQQEHGYELFVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIRE----ILGSTLITKQTGPTGSRVNCVYVEDGA 112
           G   +L   +KG           I ++RE    ILG  L+T QTGP G +V  V V    
Sbjct: 61  GGGVKL---AKG-----------IEEVREKAGAILGMNLVTPQTGPEGQKVRAVLVAGAV 106

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
           DI +E YL + +DR       +AST+GG++IEEVA   P+KI K+ +DP IG+       
Sbjct: 107 DIAKEYYLGITLDRQRSQNVIMASTEGGVEIEEVAARSPEKILKVWVDPTIGLRPFQARQ 166

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L  +G A          LY+A+ + D SL EINPL++ K G +  +D+KI+ DDNA
Sbjct: 167 LAFGLGFEGNAFKQAVQFIQALYRAYEETDSSLAEINPLVLTKQGDVVAVDAKINLDDNA 226

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           L+RH D+ ELRD+ EED  E+EA ++ L+Y+ L GN+GCMVNGAGLAMATMD+IKL GG 
Sbjct: 227 LFRHPDLAELRDIHEEDPLEVEASKYRLNYVRLTGNVGCMVNGAGLAMATMDLIKLAGGE 286

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGGGA  + V A F+II  D +VK IL+NIFGGI+RCD + +GI+ A ++V+IN
Sbjct: 287 PANFLDVGGGASPETVEAGFRIILKDPNVKVILVNIFGGIVRCDRVARGIVEAARKVQIN 346

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +PL++RL+G N +    ++ +SGL + TA    + A K+  A++ V
Sbjct: 347 VPLIVRLQGTNAEEARAILEQSGLEIETATLFKEVADKVNQALQRV 392


>gi|71663174|ref|XP_818583.1| succinyl-CoA ligase [GDP-forming] beta-chain [Trypanosoma cruzi]
 gi|70883843|gb|EAN96732.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           cruzi]
          Length = 418

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 177/388 (45%), Positives = 260/388 (67%), Gaps = 5/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NIHEYQ+KA+L++       G+   ++   E+A+  +     VVKSQI AGGRG G F+
Sbjct: 21  FNIHEYQSKAILKEGGCKTEFGIPCRTLEEVEAALGKIKTEKKVVKSQILAGGRGMGTFE 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     KGGV V  +    +   +++L  TL+TKQTGP G RVN +YV +    I RELY
Sbjct: 81  D---GFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTGPKGQRVNLLYVTEAVTGIKRELY 137

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +    FI S +GGM IEE+A+  P+KI ++ I+   G++ ++  +    L  
Sbjct: 138 LALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKRMRINVQEGISHDNCVAFAKELGF 197

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A  +  +    LY     KD + +EINPL+ ++NG +  +D+K+SFDDNA +R  DI
Sbjct: 198 SGRAAENAAEQVKALYNVGKSKDCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDI 257

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I + GG PANFLDV
Sbjct: 258 FSLADDTQIDPKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDV 317

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMR 358
           GG A ++++ AAF+IIT D  VKGIL+NIFGGIMRCD++ +GI++A +E+K  NIP+V+R
Sbjct: 318 GGSATKEQIVAAFQIITGDEKVKGILVNIFGGIMRCDIIAEGIVAASRELKGRNIPVVVR 377

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           L G+  + G R++ ESGL +  A + ++
Sbjct: 378 LSGSKEEEGKRILQESGLPLHPARNFEE 405


>gi|283954179|ref|ZP_06371704.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794458|gb|EFC33202.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 387

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 252/393 (64%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  S+  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSIDEAVANAKELGGSIWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   +ILG  LIT QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKAYATQILGMNLITHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MLAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREATEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKVILDNSNLKNIKAATNLKNGAE 380


>gi|254463742|ref|ZP_05077153.1| malate--CoA ligase subunit beta [Rhodobacterales bacterium Y4I]
 gi|206684650|gb|EDZ45132.1| malate--CoA ligase subunit beta [Rhodobacterales bacterium Y4I]
          Length = 399

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  ++VK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVTVPPGALAYSPEQAAYRARELGGDKWIVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S   +      + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCNSEAEIYEATENLFGKKLVTHQTGPEGKGIYRVYVEGAVPIAREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V  +AS++GGM+IEE++ + P+ I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRSSQRVMIVASSEGGMEIEEISAERPESIVRSTVEPAVGLQDFQAREIAFALGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL++  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PALTQQMVRTLKGCYQAFSELDATMVEINPLVVTSDNRVIALDAKMTFDDNALFRHPQIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+GNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPREARAADRGLSYVGLEGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SDS+V+ +L+NIF GI RCD + +G++ A++EV++++P+V+RL 
Sbjct: 291 GGATPERVAKAFRLVMSDSNVQAVLVNIFAGINRCDWVAEGVVQALREVQVDVPVVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A K
Sbjct: 351 GTNVEEGQKILAQSGLPLIRASSLMEAAERAVGAWK 386


>gi|149201848|ref|ZP_01878822.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149144896|gb|EDM32925.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 396

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 250/394 (63%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHE+QAK LL+++ V V +G +  S   A      L G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEFQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGDRWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +   +    + +LG  L+T QTGP G  V+ +Y+E+   I +E+YL
Sbjct: 58  -------GGVRICKNETEISEAAQWMLGRMLVTHQTGPQGKLVSRLYIEEATSIAQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR    V  +AS QGGM+IEE++   P+ I + ++DP +G+ +     +   L L 
Sbjct: 111 AFVMDRKEERVVVVASGQGGMEIEEISAQEPESIIRSVVDPAVGMQAFQAREIAFSLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+   + D +++EINPL++  +G +  LD+K+SFDDNAL+R  +I 
Sbjct: 171 AALIPQAVKTIIGCYRMMEETDANMVEINPLVVTTSGEIMALDAKVSFDDNALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+EDSRE  A    L+YI L G IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDSRETFASDRGLNYIGLTGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  +F  + +D +V+ IL+NIF GI RCD + +G++ AV+E+ + +PLV+RL 
Sbjct: 291 GGASPDRVLMSFNAVLNDRNVEAILVNIFAGINRCDWIAEGVIRAVRELNLTLPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G RLIA+SGL ++TA  L +AA  +V A
Sbjct: 351 GTNVEEGRRLIADSGLPILTAETLAEAADLVVRA 384


>gi|296447389|ref|ZP_06889315.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
 gi|296255092|gb|EFH02193.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
          Length = 389

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 243/384 (63%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL    V V  G V  S   A  A   L G  +VVK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASCGVAVPPGTVAFSPDQAVYAATELGGSHWVVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYHEVQQAARDLLGKRLVTTQTGPEGKPVQRVYVELADPYERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS  GGM+IEE+AK  P  I +++++P +G+       L   L L 
Sbjct: 111 GFVLDRKLERVRVIASKHGGMEIEEIAKTDPDAILQVIVEPAVGLLPFQARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D ++LEINPL++ K+ ++  LD+K+SFDDNAL+R  +I 
Sbjct: 171 LKQVSRAVQSILGAYRAFRDNDATMLEINPLVVTKDDKVLALDAKMSFDDNALFRRRNIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +H+L+YI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMNDPSQSDPREAQALEHSLNYIGLDGEIGCIVNGAGLAMATMDMIKHAGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD++VK +L+NIF GI RCD + +G++ AVK   I  PLV+RL 
Sbjct: 291 GGASAERVATAFRLVLSDANVKVVLVNIFAGINRCDWVAQGVIDAVKATNITAPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV+ G +L+ ESG+NVITA  L
Sbjct: 351 GTNVEAGRKLLDESGINVITADSL 374


>gi|303280569|ref|XP_003059577.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459413|gb|EEH56709.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 424

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 183/391 (46%), Positives = 258/391 (65%), Gaps = 11/391 (2%)

Query: 1   MNIHEYQAKA--LLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGK 56
           +NIHEYQA++  L+ +Y V V  G+  ++     +A   L G     VVKSQ+ AGGRG 
Sbjct: 30  LNIHEYQARSAELMAQYGVRVPPGIACTTPDEVAAAAAKLSGESGEVVVKSQVLAGGRGL 89

Query: 57  GRFKELPADSKGGVR-VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           G F    +  KGGV  V ++    +S+  ++LG TL+TKQTG  G  VN + V +   ++
Sbjct: 90  GTFT---SGLKGGVHIVPAAEAKTLSE--KMLGQTLVTKQTGAAGKPVNTLMVAEKMKLV 144

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            E+Y ++L+DR S     IA ++GG  IE++A+ +P+KI K+ +D   G+T++    L  
Sbjct: 145 NEMYFAILLDRASAGPMIIACSEGGTSIEDLAESHPEKIIKMKVDVNRGLTTDQALELAR 204

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            L++ G A  D       LY  F   D ++LE+NPL       L   D+K++FDDNA YR
Sbjct: 205 GLKVSGSAD-DAAAQLKALYAVFEKSDCTMLEVNPLAETDEKLLIAADAKLNFDDNAEYR 263

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             ++  LRD S+ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMDII L+G +PAN
Sbjct: 264 QRELFALRDHSQEDPREVAAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIISLHGASPAN 323

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGG A +++V  AFKI+T+D  VK +L+NIFGGIM+CDV+  GI++A K+V I +PL
Sbjct: 324 FLDVGGNASEEQVVEAFKILTADVKVKALLVNIFGGIMKCDVIASGIVNAAKQVGIKVPL 383

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           V+RLEG NV+ G  ++AESGLN+++A DLDD
Sbjct: 384 VVRLEGTNVEAGKEILAESGLNIVSADDLDD 414


>gi|320108310|ref|YP_004183900.1| succinyl-CoA synthetase subunit beta [Terriglobus saanensis SP1PR4]
 gi|319926831|gb|ADV83906.1| succinyl-CoA synthetase, beta subunit [Terriglobus saanensis
           SP1PR4]
          Length = 392

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 190/400 (47%), Positives = 261/400 (65%), Gaps = 13/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LR Y VPV +G ++S++  A++A K L     P+ VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRHYGVPVPEGEMVSTIEEADTAAKQLFSAGNPVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  SL+   +  + ILG  LIT QTGP G +V  + +E G+ I RE
Sbjct: 55  ----GGRGKGGGVKVTKSLEDANAASKAILGMQLITHQTGPQGQKVQRLLIEAGSAIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL +++DR +  + F+AS  GGM+IEEVA + P  I+K  I+P +G+      +L   L
Sbjct: 111 LYLGIVLDRATAKLTFMASQAGGMEIEEVAAENPDAIYKEAIEPALGLQPYQARNLAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+             LYKAF + D SLLEINP I  K+ +L  LD KI+FDDNA++RH 
Sbjct: 171 GLKPTQINQAVQFMIGLYKAFIETDCSLLEINPFITTKDDKLMALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD++EED  E+EA +  L+YI LDGNI CMVNGAGLAMATMDII+  GG+ ANFL
Sbjct: 231 DLKELRDMAEEDPLEVEASKDALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGSAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q ++ AAF I+ +D +VK I INIFGGI+R DVL   +++A K + + +P+++
Sbjct: 291 DVGGGANQQQIEAAFAILLADPNVKAIFINIFGGILRVDVLATAVVAAAKNLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NV+ G +++A+SGL+      + +AA   V A KG
Sbjct: 351 RLEGTNVEEGRKILADSGLHFEVGATMKEAADLAVVAAKG 390


>gi|114706299|ref|ZP_01439201.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
 gi|114538160|gb|EAU41282.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
          Length = 395

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL ++ V + +G +  S   A      + G  + VK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLARHGVNLPRGGLAYSPEQAAYRASEIGGERWAVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S K+V     E+LG  L+T QTGP G  VN +Y+E+  DI +ELYL
Sbjct: 58  -------GGVKLCDSDKAVKQAAEEMLGKRLVTHQTGPEGKLVNRLYIEETVDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  IAS+ GGM++EE+A   P+ + K ++DP  G+       +   L L+
Sbjct: 111 GFVLDRKAERIMIIASSSGGMEVEEIADKEPESLIKTVVDPGHGLQEFQAREIAYNLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D     Y+AF D D S+LEINPL+I   G +  LD+K+SFD+NAL+R  +I 
Sbjct: 171 YKVVNRMVDTILGCYRAFRDYDGSMLEINPLVITGGGSVMALDAKMSFDENALFRRQEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+G IGC++NGAGLAMAT+D+IK+ GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRETFASDRGLSYVGLNGEIGCIINGAGLAMATLDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA +F+ +  D +VK I +NIF GI RCD + +G++ A KEV +++P+++RL 
Sbjct: 291 GGASPDRVAKSFRAVLQDENVKVIFVNIFAGINRCDWVAEGVIKAKKEVGVSLPIIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SG ++I A  L + A+K V A K
Sbjct: 351 GTNVEKGKQILADSGEDIIVADTLKEGAEKAVKAWK 386


>gi|315124057|ref|YP_004066061.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315017779|gb|ADT65872.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 387

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 251/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVSIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|167624409|ref|YP_001674703.1| succinyl-CoA synthetase subunit beta [Shewanella halifaxensis
           HAW-EB4]
 gi|189081802|sp|B0TJP8|SUCC_SHEHH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167354431|gb|ABZ77044.1| succinyl-CoA synthetase, beta subunit [Shewanella halifaxensis
           HAW-EB4]
          Length = 388

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A SGL++I A  L D
Sbjct: 351 GTNANLGRDVLASSGLDIIAAESLTD 376


>gi|127512586|ref|YP_001093783.1| succinyl-CoA synthetase subunit beta [Shewanella loihica PV-4]
 gi|189081803|sp|A3QDH6|SUCC_SHELP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126637881|gb|ABO23524.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           loihica PV-4]
          Length = 388

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 184/386 (47%), Positives = 248/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLATMFTDHDFALLEINPLVITTEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDANVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G  ++A SGL++I A  L D
Sbjct: 351 GTNADLGREVLANSGLDIIAAESLTD 376


>gi|2351685|gb|AAB68609.1| adhesin protein AP51-1 [Trichomonas vaginalis]
          Length = 403

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 177/397 (44%), Positives = 251/397 (63%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  KYNV     +V  S   A  A + +  P  V+K+Q++ GGRGKG + 
Sbjct: 6   FNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGHW- 64

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L    K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 65  -LETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYF 123

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L 
Sbjct: 124 AILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLT 183

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G      L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 184 GKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 243

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+G
Sbjct: 244 GYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLG 303

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V   F II+  S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 304 GAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLE 363

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +LI ESGL +I+A +L DA +K V A KG
Sbjct: 364 GTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKG 400


>gi|149928247|ref|ZP_01916491.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
 gi|149823053|gb|EDM82294.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
          Length = 329

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 168/328 (51%), Positives = 236/328 (71%)

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           ++V  S+  V +   +ILG  LIT QTGP G +V+ + VE+GADI +E Y+ ++VDR + 
Sbjct: 1   MKVAKSMDDVKTYASQILGMQLITHQTGPEGQKVSRLLVEEGADIKKEYYVGMVVDRVTQ 60

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            V  +AS++GGM+IEEVA+  P+ I K+ +DP+ G+T  +   L   + +   +      
Sbjct: 61  RVCVMASSEGGMEIEEVAEHTPELIHKVYVDPVAGLTDSEADDLAVKIGIPAGSVAKARV 120

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
            F  LYKAF + D SL EINPLI+  +G +  LD+K++FD NAL+RH +I  LRD++EED
Sbjct: 121 AFQGLYKAFWETDASLAEINPLILTGSGDIIALDAKLNFDSNALHRHPEIVALRDLAEED 180

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
             EIEA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVGGGA  +KV 
Sbjct: 181 PAEIEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVT 240

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFKI+  + ++K IL+NIFGGIMRCDV+  G+++A K V +++PLV+R++G N D+G +
Sbjct: 241 EAFKIMLKNPNLKAILVNIFGGIMRCDVIADGVVAASKAVGLSVPLVVRMKGTNEDLGKK 300

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAVKG 397
           ++AESGL +I A  + +AAQK+V A KG
Sbjct: 301 ILAESGLPIIAANTMGEAAQKVVAATKG 328


>gi|116327602|ref|YP_797322.1| succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116331787|ref|YP_801505.1| succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|122280476|sp|Q04QS3|SUCC_LEPBJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122284601|sp|Q053V6|SUCC_LEPBL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116120346|gb|ABJ78389.1| Succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116125476|gb|ABJ76747.1| Succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 390

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/400 (46%), Positives = 251/400 (62%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           M IHEYQAK +LR++   V  G+VI     A  A   +     G + VVK+QIHA     
Sbjct: 1   MKIHEYQAKEILRRHKANVPFGIVIDKKENASKAHDEVTSKTGGSVVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV+V  + +   + + +ILG  LIT QTGP G +V  VY+E G DI +
Sbjct: 56  -----GGRGKGGGVKVTKTKEDATAAVDKILGMQLITPQTGPEGKKVLKVYLEQGIDIAK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS+L+DR+      +AST+GGM+IEEVA+ +P+KI K+ +DP IG+       L   
Sbjct: 111 EYYLSILLDRSIRKTILMASTEGGMEIEEVAETHPEKILKIAVDPGIGLQVNQARQLAFE 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L  ++      L   +Y A+  +D SLLEINPLI+ K   +   D KI  D+NALYRH
Sbjct: 171 LGLPAESHKSFQSLVMAIYDAYIKEDASLLEINPLILTKQNEIIAGDCKIDLDENALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D    RD++EED  E++A + NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANF
Sbjct: 231 ADNAAFRDITEEDPLEVQASEFNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA++  V   FKII  D +VKGI +NIFGGI+RCD++ +GI+ A K V + +PLV
Sbjct: 291 LDVGGGANKTTVTNGFKIILGDPNVKGIFVNIFGGIVRCDMVAEGIIEAAKAVDLKVPLV 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL+G N ++G  ++ +SGL +    DL +AA  I   +K
Sbjct: 351 VRLQGTNSELGREVLNKSGLKITGVDDLREAASTIAKLIK 390


>gi|121612371|ref|YP_001000233.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005189|ref|ZP_02270947.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|189046905|sp|A1VYP2|SUCC_CAMJJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|87250129|gb|EAQ73087.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 387

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/390 (47%), Positives = 246/390 (63%), Gaps = 11/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+    ++P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNSIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASAETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           G N      ++  S L N+  A +L + A+
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|319786169|ref|YP_004145644.1| succinyl-CoA synthetase subunit beta [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464681|gb|ADV26413.1| succinyl-CoA synthetase, beta subunit [Pseudoxanthomonas suwonensis
           11-1]
          Length = 389

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 182/396 (45%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK LL +Y +PV  G V ++   A +A ++L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLLAEYGIPVPAGKVAATPDEAVAAAQSLGQGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   ++  V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTVDDVKAAAAKMLGTRMATYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  +++IAS++GG++IE+VA + P+KI  L +D + GV      ++   + L 
Sbjct: 111 SVLVDRGTRTISYIASSEGGVEIEQVAAETPEKIHTLNVDFVEGVQPYHGRNIGFQMGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  NLY+ F +KD+SL+E+NPL I+ +G L  LD K + DDNA +RH ++ 
Sbjct: 171 AKQAGQFANIMVNLYRLFNEKDLSLVELNPLAILDDGNLYALDGKFNSDDNANFRHKELV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ALRDKSQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|322436808|ref|YP_004219020.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9]
 gi|321164535|gb|ADW70240.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9]
          Length = 389

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 191/380 (50%), Positives = 257/380 (67%), Gaps = 15/380 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LRKYNVPV  G + +++  A++A K L      + VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRKYNVPVPGGEMATTLEEADTAAKALFAAGNTVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  SL    +  + ILG  LIT QTGPTG +V  + +E+G+ I RE
Sbjct: 55  ----GGRGKGGGVKVAKSLDDANTASKAILGMQLITHQTGPTGQKVQRLLIEEGSLIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL L++DR S  V F+AS  GGM+IEEVA   P  I+K  +DP++G+      SL   L
Sbjct: 111 LYLGLVLDRASAKVVFMASQSGGMEIEEVAHATPDLIYKEYVDPVVGLQPWQARSLAFKL 170

Query: 178 ELQGQARIDGGDLFP-NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            L   A+I+    F   LYKAF + D +L+EINP I  K+G+L  LD KI+FDDNA++RH
Sbjct: 171 GLT-TAQINPAVSFMMGLYKAFIETDSTLMEINPFITTKDGKLMALDCKINFDDNAMFRH 229

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++ELRD++EED  E+EA +  L+YI LDGNI CMVNGAGLAMATMDII+  GG  ANF
Sbjct: 230 KDLKELRDLAEEDPLEVEASKFALNYIKLDGNIACMVNGAGLAMATMDIIEYAGGKAANF 289

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+Q+++  AF I+ SD +VK I INIFGGI+R DVL   +++A +++ + +P++
Sbjct: 290 LDVGGGANQEQIENAFGILLSDPNVKAIFINIFGGILRVDVLATAVVAAARKLNVQLPII 349

Query: 357 MRLEGANVDIGNRLIAESGL 376
           +RLEG NV+ G +++AESGL
Sbjct: 350 LRLEGTNVEEGRKILAESGL 369


>gi|255070267|ref|XP_002507215.1| succinate-coa ligase [Micromonas sp. RCC299]
 gi|226522490|gb|ACO68473.1| succinate-coa ligase [Micromonas sp. RCC299]
          Length = 423

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 185/398 (46%), Positives = 257/398 (64%), Gaps = 9/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           +NIHEYQ   +L ++ V V  G+   +   VHAA   +++  G + V+KSQI AGGRG G
Sbjct: 31  LNIHEYQGAEILARHGVRVPLGIACQTADQVHAAAEKLRSDDGDV-VLKSQILAGGRGLG 89

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            FK      +GGV +  S K+      ++LG  L+TKQTG  G  VN V V     ++ E
Sbjct: 90  HFKN---GLQGGVHIVPSGKAQAVG-EKMLGQLLVTKQTGAAGKPVNTVLVAQKMKLVNE 145

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y ++L+DR S     IA ++GG  IE++A+ +P+KI ++ ID   G+T      +   L
Sbjct: 146 MYFAILLDRASAGPLVIACSEGGTSIEDLAETHPEKITRMKIDIRTGLTEAQARDIVAHL 205

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            ++G    D       LY  F   D ++LEINPL      +L   D+K++FDDNA YR  
Sbjct: 206 GVKGSVS-DAVAQVKALYNVFISSDCTMLEINPLAETAEAKLIAADAKLNFDDNAEYRQK 264

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            +  LRD S+ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMDII L+G APANFL
Sbjct: 265 GLFALRDHSQEDPREVTAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIISLHGAAPANFL 324

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A + +V  AFKI+TSD+ V+ +L+NIFGGIM+CDV+  GI+SA K+V + +PLV+
Sbjct: 325 DVGGNASEQQVVEAFKILTSDTKVQALLVNIFGGIMKCDVIASGIVSAAKQVGLQVPLVV 384

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV+ G  ++ +SG+++I A DLDDAA+K V A+
Sbjct: 385 RLEGTNVEAGKEILEKSGMDIIAANDLDDAAKKAVSAL 422


>gi|57242653|ref|ZP_00370590.1| succinyl-CoA synthase, beta subunit [Campylobacter upsaliensis
           RM3195]
 gi|57016582|gb|EAL53366.1| succinyl-CoA synthase, beta subunit [Campylobacter upsaliensis
           RM3195]
          Length = 387

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 186/390 (47%), Positives = 244/390 (62%), Gaps = 11/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+  +  V   KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFAENGVATLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG TL+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKSLDEVKNYAEQILGMTLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK  P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKQSPEKIAKVGIDPQIGFKLFHALEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD++LYRH DI 
Sbjct: 171 KDESKKLAVMIEKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSSLYRHSDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ALRDITEENDAEREAGEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++N+P+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNVPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           G N      ++  S L N+  A  L + A+
Sbjct: 351 GTNAAEAKSILDNSNLKNIKAATSLKEGAE 380


>gi|1711579|sp|Q03184|SUCB_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           hydrogenosomal; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|162521|gb|AAA30326.1| succinyl-CoA synthetase beta-subunit [Trichomonas vaginalis]
          Length = 407

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 177/397 (44%), Positives = 251/397 (63%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  KYNV     +V  S   A  A + +  P  V+K+Q++ GGRGKG + 
Sbjct: 10  FNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGHW- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L    K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 69  -LETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYF 127

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L 
Sbjct: 128 AILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLT 187

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G      L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 188 GKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 247

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+G
Sbjct: 248 GYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLG 307

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V   F II+  S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 308 GAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLE 367

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +LI ESGL +I+A +L DA +K V A KG
Sbjct: 368 GTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKG 404


>gi|332535008|ref|ZP_08410824.1| succinyl-CoA ligase [ADP-forming] beta chain [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035575|gb|EGI72068.1| succinyl-CoA ligase [ADP-forming] beta chain [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 388

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 186/386 (48%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSQGFACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PVQMKQFVKIFMGLGNMFTDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++  SGL++I A  L D
Sbjct: 351 GTNAELGREVLKNSGLDIIAAESLTD 376


>gi|86151734|ref|ZP_01069948.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|283955955|ref|ZP_06373445.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|85841363|gb|EAQ58611.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|283792615|gb|EFC31394.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 387

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 251/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|284925796|gb|ADC28148.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 387

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 251/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYTSKILGINLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|157414814|ref|YP_001482070.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|189046903|sp|A8FKV6|SUCC_CAMJ8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157385778|gb|ABV52093.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747452|gb|ADN90722.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315931727|gb|EFV10682.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 387

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 189/393 (48%), Positives = 250/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A S  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLATHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|114326716|ref|YP_743873.1| malate--CoA ligase subunit beta [Granulibacter bethesdensis
           CGDNIH1]
 gi|114314890|gb|ABI60950.1| succinyl-CoA synthetase beta chain [Granulibacter bethesdensis
           CGDNIH1]
          Length = 389

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 171/384 (44%), Positives = 244/384 (63%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL    V V +G +  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASAGVAVPRGAIAFSADQAVYAATELGGWHWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V      +LG  L+T QTGP G  V  VYVE      +E YL
Sbjct: 58  -------GGIKLCKTYHEVREAAAGMLGKRLVTHQTGPEGKPVQRVYVEVADPFEKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS +GGM+IEE+A  +P+K+ +++++P +G+       +   L L 
Sbjct: 111 GFVLDRKLERVRVIASAEGGMEIEEIASKHPEKLIQVIVEPAVGLQQFQARQIAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  ++ 
Sbjct: 171 SRQVQRAVTSIMGAYRAFRDHDATMLEINPLVLTKDDRILALDAKMSFDDNALFRRNNVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE +A +HNL+Y+ L+G+IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 NMHDPSQDDPREAQAAEHNLNYVGLEGDIGCVVNGAGLAMATMDVIKYAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++ A AF+++ SD +VK +L+NIF GI RCD + +G++ AVKEV + +PLV+RL 
Sbjct: 291 GGASPERTATAFRLVLSDKNVKVVLVNIFAGINRCDWIAEGVVHAVKEVDLKLPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV+ G R++ ESG++VI A  L
Sbjct: 351 GTNVEEGRRILKESGISVIMAESL 374


>gi|210075643|ref|XP_502415.2| YALI0D04741p [Yarrowia lipolytica]
 gi|199425760|emb|CAG80603.2| YALI0D04741p [Yarrowia lipolytica]
          Length = 435

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 245/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE+++  +L+ Y + V KG   ++   AE   K L     V+K+Q   GGRGKG F 
Sbjct: 25  LSLHEFRSAQILQNYGIDVPKGGAATTPQQAEDIAKKLGCEDMVIKAQALTGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++ SS         ++L   + TKQTGP G  V  VYV +   + RE Y+
Sbjct: 85  N---GLKGGVKLISSPTEAKMYAEQMLNHKIFTKQTGPQGKPVTAVYVVEREFVRREAYV 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VA + P  I    +D   GVT      +   L   
Sbjct: 142 AILMDRATQKPIIVASSQGGMDIEGVAAENPDAIHTFPVDIHTGVTDTQAIEVAKALGFS 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A  +  D    LYK F DKD + +EINPL    + R+  +D+K+ FDDNA +R  ++ 
Sbjct: 202 SKATQEAADDIKKLYKVFTDKDATQIEINPLSETTDHRVVAMDAKLGFDDNASFRQEEVW 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED  EIEA +H L++I LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 262 SWRDLTQEDPEEIEAAKHGLNFIKLDGNIGCLVNGAGLAMATMDIIKLYGGEPANFLDCG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D +  AF++ITS+  V  I +NIFGGI+RCD + KG+++  + + +NIP+V RL+
Sbjct: 322 GGATADAIKKAFELITSEPGVTAIFVNIFGGIVRCDNIAKGLIAVAQNMNLNIPIVARLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+    +LI++SGL + +  DLD+AAQK+    K
Sbjct: 382 GTNLAEAQKLISDSGLKIFSFGDLDEAAQKVCQLSK 417


>gi|195169087|ref|XP_002025359.1| GL12039 [Drosophila persimilis]
 gi|194108827|gb|EDW30870.1| GL12039 [Drosophila persimilis]
          Length = 422

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 184/393 (46%), Positives = 257/393 (65%), Gaps = 6/393 (1%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+Q+K LL+KY V + +  V+ + ++    +KT   P YVVK+QI AGGRGKG F     
Sbjct: 33  EFQSKDLLQKYGVAIQQFKVLDNSNSDAEIVKTFECPEYVVKAQILAGGRGKGTFDN--- 89

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             KGGV + S+   V+S  ++++G  LITKQT  +G  VN V V    +I RE YL +L+
Sbjct: 90  GFKGGVHITSNKSDVLSLSKQMIGHRLITKQTPKSGILVNKVMVARSVNITRETYLCILL 149

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR       IAS  GGMDIE VA++ P+K+  + +D    +    +  +   LE +G   
Sbjct: 150 DREHNGPVLIASPAGGMDIEAVAEETPEKLLTVPLDIGKPIPEATLIKVAKFLEFKGDTV 209

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI  + D
Sbjct: 210 QRCAEEIQKLYTFFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFAM-D 268

Query: 245 VSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           ++EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDII+L GG+PANFLDVGGG
Sbjct: 269 ITEEEADPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIQLNGGSPANFLDVGGG 328

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
            ++ +VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+RLEG 
Sbjct: 329 VNEAQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVRLEGT 388

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NVD    ++  SGL + TA DLDDAAQK V A+
Sbjct: 389 NVDKAREILKNSGLPIQTASDLDDAAQKSVAAL 421


>gi|146328975|ref|YP_001210178.1| succinyl-CoA synthetase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|189029906|sp|A5EX54|SUCC_DICNV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146232445|gb|ABQ13423.1| succinyl-CoA synthetase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 386

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 175/386 (45%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALLR   +   +G++I +   A+ A + L G  +VVK+QIH+GGRGK    
Sbjct: 1   MNLHEYQAKALLRAAGIKTPRGIIIKNSVEAKEAAQQLGGNRWVVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +L  V      +LGS L T+Q+   G  +N V +E+    +   YL
Sbjct: 58  -------GGIKTAQTLDEVHHISAAMLGSRLKTEQSSADGLPINEVLIEEECRAIATYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L +DR    + FIAS  GG +IE VA+  P+ I    ++P IG +    A +   L+L 
Sbjct: 111 ALTLDRPRQQIVFIASMAGGTEIETVAETNPEAIIYAGVNPAIGFSPYLSARVGGALQLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              ++    L   LY+ F D D++LLE+NPLII ++     LD+KIS DDNAL+RH ++ 
Sbjct: 171 KSYQLPLTKLMNRLYQLFIDNDLTLLELNPLIITEDHEFLPLDAKISIDDNALFRHQELV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED RE +A++  L+Y+ LDG IGC+ NGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 DLRDTTQEDHRETQAQELQLNYVPLDGTIGCIANGAGLAMATMDIIKLYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+I + S +K IL+NIFGGI+RCD++  GI+ A KE+ + IP+++RL+
Sbjct: 291 GDATSERVKQAFKLILTSSRIKSILVNIFGGIVRCDLIADGIIQAAKEIDLKIPVIVRLQ 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NVD+G +++ E  LN+  A DL D
Sbjct: 351 GNNVDLGRKMLDECPLNLQAADDLID 376


>gi|145248642|ref|XP_001400660.1| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus niger
           CBS 513.88]
 gi|134081327|emb|CAK41830.1| unnamed protein product [Aspergillus niger]
          Length = 443

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 249/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGMPKGEVARSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFASQMIGQKLITKQTGAAGRLCNSVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID  +GVT      +   L   
Sbjct: 150 AVLMDRASQSPVIVASSQGGMDIEAVAKENPEAIITTPIDIKVGVTDAIAHKIVTELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI ESGL + +  DL  AA+K V   K
Sbjct: 390 GTNMEQAHKLINESGLKIFSIEDLQSAAEKSVQFSK 425


>gi|85706354|ref|ZP_01037448.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
 gi|85669127|gb|EAQ23994.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
          Length = 396

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 250/394 (63%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHE+QAK LL+++ V V +G +  S   A      L G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEFQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGDRWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +    + +LG  L+T QTGP G  V+ +Y+E+   I +E+YL
Sbjct: 58  -------GGVKICKNEIEISEAAQWMLGRMLVTHQTGPQGKLVSRLYIEEATSIAQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR    V  +AS QGGM+IEE++   P+ I + ++DP +G+ +     +   L L 
Sbjct: 111 AFVMDRKEERVVVVASGQGGMEIEEISAQEPESIIRSVVDPAVGMQAFQAREIAFSLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+   + D S++EINPL++  +G +  LD+K+SFDDNAL+R  +I 
Sbjct: 171 AALIPQAVKTIIGCYRMMEETDASMVEINPLVVTTSGEIMALDAKVSFDDNALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    L+YI L+G IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDPRETFAGDRGLNYIGLEGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  +F  + +D +V+ IL+NIF GI RCD + +G++ AV+E+ + +PLV+RL 
Sbjct: 291 GGASPERVLMSFNAVLNDRNVEAILVNIFAGINRCDWIAEGVIRAVRELNLTLPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G RLIAESGL ++TA  L DAA  +V A
Sbjct: 351 GTNVEEGRRLIAESGLPILTAETLADAADLVVRA 384


>gi|57167578|ref|ZP_00366718.1| succinyl-CoA synthase, beta subunit [Campylobacter coli RM2228]
 gi|305433084|ref|ZP_07402240.1| succinyl-CoA synthase [Campylobacter coli JV20]
 gi|57020700|gb|EAL57364.1| succinyl-CoA synthase, beta subunit [Campylobacter coli RM2228]
 gi|304443785|gb|EFM36442.1| succinyl-CoA synthase [Campylobacter coli JV20]
          Length = 387

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 186/390 (47%), Positives = 244/390 (62%), Gaps = 11/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A    K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVEEAVENAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASAETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           G N      ++  S L N+  A +L + A+
Sbjct: 351 GTNAAEAKAILDSSNLKNIKAATNLKNGAE 380


>gi|159466790|ref|XP_001691581.1| succinate-coa ligase beta chain [Chlamydomonas reinhardtii]
 gi|158278927|gb|EDP04689.1| succinate-coa ligase beta chain [Chlamydomonas reinhardtii]
          Length = 421

 Score =  339 bits (869), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 175/397 (44%), Positives = 258/397 (64%), Gaps = 7/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
            N+HEYQ   ++ K+ V V  G+  +++   + A+  +       V+KSQI AGGRG G+
Sbjct: 29  FNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVDQMADEKGEVVIKSQILAGGRGLGK 88

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           F       +GGV +    K+ +   +++LG+TL+TKQTGP G  VN + +     + RE+
Sbjct: 89  FTN---GLQGGVHIVPKAKA-LELAKQMLGATLVTKQTGPAGKPVNTLLISKKMKLKREM 144

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR +     I  ++GG  IE++A+ +P+KI K+ ID  +G+T      + + L 
Sbjct: 145 YFAILLDRKTAGPMMIGCSEGGTSIEDLAEKFPEKIIKIPIDIRVGITDAQAMQMVEGLR 204

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           + G        +   LY  F   D +++E+NPL    +G L   D+K+ FDDNA YR   
Sbjct: 205 VTGDKAAAAKQIK-ALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKP 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I +++D S+ D RE+ A +++L+YI LDG+IGCMVNGAGLAMATMDIIK++GGAPANFLD
Sbjct: 264 IFDMKDESQIDPREVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A++ +V  AFKI+T D  VK IL+NIFGGIM+CDV+  GI++A K+V + +PLV+R
Sbjct: 324 VGGSANEQQVVEAFKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV  G  ++A SG+ +ITA DLDDAA+K V ++
Sbjct: 384 LEGTNVARGKEILATSGMTIITADDLDDAAKKAVASI 420


>gi|123477791|ref|XP_001322061.1| Succinyl-CoA ligase beta-chain, hydrogenosomal precursor
           [Trichomonas vaginalis G3]
 gi|121904900|gb|EAY09838.1| Succinyl-CoA ligase beta-chain, hydrogenosomal precursor
           [Trichomonas vaginalis G3]
          Length = 407

 Score =  339 bits (869), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 177/397 (44%), Positives = 250/397 (62%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  KYNV     +V  S   A  A + +  P  V+K+Q++ GGRGKG + 
Sbjct: 10  FNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGHW- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L    K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 69  -LETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYF 127

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L 
Sbjct: 128 AILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLT 187

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G      L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 188 GKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 247

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ +    EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+G
Sbjct: 248 GYRDLKQVSPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLG 307

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V   F II+  S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 308 GAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLE 367

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +LI ESGL +I+A +L DA +K V A KG
Sbjct: 368 GTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKG 404


>gi|205355389|ref|ZP_03222160.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346623|gb|EDZ33255.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 387

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 251/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|186470719|ref|YP_001862037.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
 gi|184197028|gb|ACC74991.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
          Length = 395

 Score =  338 bits (868), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 247/396 (62%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL  + VP+ +G V  +   A      L G  + VK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKDLLAGFGVPIQRGAVAYTPDQAVYCATELGGWHWAVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V      + G  L+T QTGP G  V  VYVE      RE+YL
Sbjct: 58  -------GGIKLCETYHDVHEAATSLFGKHLVTTQTGPEGKVVERVYVEVAEKFDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  IAS QGGMDIE++    P+ + +++++P +G+       +   L L 
Sbjct: 111 GIVLDRKAERVRVIASAQGGMDIEDIVHTNPEAVHQIVVEPAVGLQPFQAREIAFGLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D +++EINPL++  + R+  LD+KISFDDN L+RH  + 
Sbjct: 171 IKQVSRAVSTIMGAYRAFRDLDATMVEINPLVVTTDDRVIALDAKISFDDNGLFRHPHVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD ++ED RE EA Q  L+Y+ LDG+IGC++NGAGLAMATMD IK  GG PANFLDVG
Sbjct: 231 EMRDAAQEDPREAEAAQFGLNYVGLDGDIGCIINGAGLAMATMDTIKYAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VAAAF+++ SD +V  +L+NIF GI RCD + +G++ A + ++  +PLV+RL 
Sbjct: 291 GGASPERVAAAFRLVLSDQNVSAVLVNIFAGINRCDWVAEGVVQAARGLR--VPLVVRLA 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G R+I ESGL +I A  L +AAQK V A K
Sbjct: 349 GTNVEEGRRIINESGLPIIAAESLLEAAQKAVEASK 384


>gi|119472925|ref|ZP_01614798.1| succinyl-CoA synthetase subunit beta [Alteromonadales bacterium
           TW-7]
 gi|119444643|gb|EAW25952.1| succinyl-CoA synthetase subunit beta [Alteromonadales bacterium
           TW-7]
          Length = 388

 Score =  338 bits (867), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 186/386 (48%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSQGFACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDENGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFVKIFMGLGKMFNDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++  S L++I A  L D
Sbjct: 351 GTNAELGREVLKSSDLDIIAAESLTD 376


>gi|164608346|gb|ABY62724.1| mitochondrial succinyl-CoA synthetase beta subunit [Blastocystis
           sp. ATCC 50177]
 gi|164608348|gb|ABY62725.1| mitochondrial succinyl-CoA synthetase beta subunit [Blastocystis
           sp. ATCC 50177]
          Length = 416

 Score =  338 bits (867), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 187/404 (46%), Positives = 259/404 (64%), Gaps = 11/404 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           +NIHE+Q+K L++KY      G V  S   +    K L    PG  +VVK+Q+ AGGRGK
Sbjct: 15  LNIHEWQSKQLIQKYGGRAQSGEVAFSPERSRDIAKKLWNQFPGCKFVVKAQVLAGGRGK 74

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G ++      +GGV++  + + V     E++G  LITKQTG  G   N V V     IL+
Sbjct: 75  GHWEH---GMQGGVKLAKTPEEVYEIANEMIGHKLITKQTGAKGINCNKVMVCGAVKILK 131

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS+L+DR  G    IA++QGGM IEEVA+  P+ +FK+ I    G T+E +  L   
Sbjct: 132 EFYLSILLDRAMGCPVIIATSQGGMGIEEVAQKCPECLFKVPISVKNGPTNEQLVKLAKD 191

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR----LRVLDSKISFDDNA 232
           L L+G    D  D    LY+ F   D +++EINPL +++       +  LD+KI+FD +A
Sbjct: 192 LGLEGDLVQDCVDNVKALYQVFDKCDSTMVEINPLGVIETPTDEKVICCLDAKIAFDKDA 251

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R  +I  LRD S ED R++ A   +L+Y+ LDG+IGCMVNGAGLAMATMD I  +GG+
Sbjct: 252 AFRQKEIFALRDKSREDPRDVRASLADLNYVGLDGDIGCMVNGAGLAMATMDTINYFGGS 311

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLDVGG A ++++  A +I+ SD  VK ILINIFGGIMRCDV+ +GI+ AV+E+K++
Sbjct: 312 AANFLDVGGNAKKEQITEALRILNSDKHVKSILINIFGGIMRCDVVAQGIMDAVREMKLD 371

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +PLV+RLEG NV  G  ++  SGLN+I A DL DAA+K V ++K
Sbjct: 372 LPLVVRLEGTNVAKGKEILKSSGLNIIPANDLGDAAKKAVASLK 415


>gi|57238267|ref|YP_178652.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni RM1221]
 gi|86149019|ref|ZP_01067251.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88597071|ref|ZP_01100307.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|148925903|ref|ZP_01809590.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|218562185|ref|YP_002343964.1| succinyl-CoA synthetase subunit beta [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|21264059|sp|Q9PHY1|SUCC_CAMJE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81353886|sp|Q5HVN3|SUCC_CAMJR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|57167071|gb|AAW35850.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni RM1221]
 gi|85840377|gb|EAQ57634.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190760|gb|EAQ94733.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359891|emb|CAL34679.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145844889|gb|EDK21993.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|315057951|gb|ADT72280.1| Succinyl-CoA ligase [ADP-forming] beta chain [Campylobacter jejuni
           subsp. jejuni S3]
 gi|315927031|gb|EFV06386.1| Succinyl-CoA synthetase subunit beta [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929566|gb|EFV08754.1| Succinyl-CoA synthetase subuint beta [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 387

 Score =  338 bits (867), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 250/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD +EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDTTEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|2351687|gb|AAB68610.1| adhesin protein AP51-2 [Trichomonas vaginalis]
          Length = 405

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 176/397 (44%), Positives = 251/397 (63%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            NI E+Q+K +  K+NV     +V  +   A +A K +  P  V+K+Q++ GGRGKG +K
Sbjct: 7   FNILEWQSKEICAKFNVAAGINLVARTPEEAAAAFKKMGLPAAVIKAQVYCGGRGKGHWK 66

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY 
Sbjct: 67  E--TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGADGLLCQAVMLSDPVEVKRELYF 124

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     IAST+GG++IEEVA  +P+KI K  +D + G+T +   ++   L L 
Sbjct: 125 AILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKILKFQLDGVEGITRDVAVNISKQLGLT 184

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I 
Sbjct: 185 GKAYENGIEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIF 244

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+I+L GG PANFLD+G
Sbjct: 245 GYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIQLAGGDPANFLDLG 304

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +  V   F II+S   VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLE
Sbjct: 305 GGASEAAVTEGFTIISSQPHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLE 364

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +LI ESGL +I A +L DA  K V A  G
Sbjct: 365 GTNVDAGKKLIRESGLPIIPADNLTDAGIKAVKAANG 401


>gi|195126843|ref|XP_002007878.1| GI13181 [Drosophila mojavensis]
 gi|193919487|gb|EDW18354.1| GI13181 [Drosophila mojavensis]
          Length = 420

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 183/397 (46%), Positives = 259/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +       + +   P YVVK+QI AGGRGKG F 
Sbjct: 28  LNLLEFQSKDLLQKYGVAIQQFKVLDNSSTDTQVVNSFDCPEYVVKAQILAGGRGKGIFD 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V++  ++++G+ LITKQT  TG  VN V V    +I RE Y+
Sbjct: 88  N---GFKGGVHITSNKNDVLALSKKMIGNRLITKQTPKTGILVNKVMVARSVNITRETYV 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+K+  + +D    +  + +  +   LE +
Sbjct: 145 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKLLTVPLDIDKPIPEDKLIQVAKFLEFK 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A     D    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  +I 
Sbjct: 205 GDAIKRCADEIQKLYTLFKSVDAVQIEINPLAETDTGEVISVDAKLNFDDNAQFRQKEIF 264

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE+S  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 265 AM-DVTEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG ++ +VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+R
Sbjct: 324 VGGGVNEQQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V ++
Sbjct: 384 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVASL 420


>gi|115388833|ref|XP_001211922.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
 gi|114196006|gb|EAU37706.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
          Length = 443

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGMPKGEVARSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNSVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID   GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVASSQGGMDIEAVAKENPEAIITTPIDIKTGVTDEIALKIATELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCIPEAKDTIQKLYKVFMEKDATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ + IP+V RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMGLRIPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +L+ ESGL + +  DL  AA+K V   K
Sbjct: 390 GTNMEQAQKLLNESGLKIFSIEDLQSAAEKSVQFSK 425


>gi|260798917|ref|XP_002594446.1| hypothetical protein BRAFLDRAFT_208919 [Branchiostoma floridae]
 gi|229279680|gb|EEN50457.1| hypothetical protein BRAFLDRAFT_208919 [Branchiostoma floridae]
          Length = 411

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 183/399 (45%), Positives = 260/399 (65%), Gaps = 7/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           +N+ EYQ+K LL  Y V V + GV  ++  A E A +  P   YV+K+QI AGGRGKG F
Sbjct: 17  LNLQEYQSKKLLDDYKVAVQRFGVADTTDQAVEVAKQLAPVREYVIKAQILAGGRGKGTF 76

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  KGGV+  +    V S ++++LG  L+TKQT P G  V  V V +  DI RE Y
Sbjct: 77  SN---GVKGGVKFTTVPDEVGSLVKDMLGFKLVTKQTPPGGVLVQKVMVAESVDISRETY 133

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTSEDVASLCDMLE 178
            ++L+DR +     IAST+GGMDIEEVA+  P +I+K+  +D   G+++     L   L+
Sbjct: 134 FAILMDRETNGPVIIASTEGGMDIEEVAEKTPDRIYKVQPVDIHEGLSAAVARQLAQNLK 193

Query: 179 LQGQARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            +G  ++D   L   N+Y+ F   D + +EINP     +GR+  +D+KI+FDDNA +R  
Sbjct: 194 FEGD-KLDQATLQIMNMYQLFLSVDATQVEINPFAETSDGRVICVDAKINFDDNAEFRQK 252

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  L D SE D RE++A +HNL+YI +DGNIGC+VNGAGLAMATMDI+KL+GG PANFL
Sbjct: 253 EIFALDDCSETDPREVQAHKHNLNYIGMDGNIGCLVNGAGLAMATMDIVKLHGGEPANFL 312

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGG  + +V  AFKI+TSD  VK +L+NIFGGI+ C  +  GI +A + + + IPL++
Sbjct: 313 DCGGGVTEGQVFEAFKILTSDPQVKAVLVNIFGGIVNCATIANGITAAARGIDLKIPLIV 372

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RLEG NVD   R++ +SGL +I A  + +AA+  V++++
Sbjct: 373 RLEGTNVDEAKRILKKSGLPIIPADGMGEAAKHAVNSIQ 411


>gi|125979431|ref|XP_001353748.1| GA10444 [Drosophila pseudoobscura pseudoobscura]
 gi|54640731|gb|EAL29482.1| GA10444 [Drosophila pseudoobscura pseudoobscura]
          Length = 422

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 183/393 (46%), Positives = 257/393 (65%), Gaps = 6/393 (1%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+Q+K LL+KY V + +  V+ + ++    +KT   P YVVK+QI AGGRGKG F     
Sbjct: 33  EFQSKDLLQKYGVAIQQFKVLDNSNSDAEIVKTFECPEYVVKAQILAGGRGKGTFDN--- 89

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             KGGV + S+   V+S  ++++G  LITKQT  +G  VN V V    +I RE YL +L+
Sbjct: 90  GFKGGVHITSNKSDVLSLSKQMIGHRLITKQTPKSGILVNKVMVARSVNITRETYLCILL 149

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR       IAS  GGMDIE VA++ P+K+  + +D    +    +  +   LE +G   
Sbjct: 150 DREHNGPVLIASPAGGMDIEAVAEETPEKLLTVPLDIGKPIPEATLIKVAKFLEFKGDTV 209

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI  + D
Sbjct: 210 QRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFAM-D 268

Query: 245 VSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           ++EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDII+L GG+PANFLDVGGG
Sbjct: 269 ITEEEADPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIQLNGGSPANFLDVGGG 328

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
            ++ +VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+RLEG 
Sbjct: 329 VNEAQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVRLEGT 388

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NV+    ++  SGL + TA DLDDAAQK V A+
Sbjct: 389 NVEKAREILKNSGLPIQTASDLDDAAQKSVAAL 421


>gi|70982219|ref|XP_746638.1| succinyl-CoA synthetase beta subunit [Aspergillus fumigatus Af293]
 gi|66844261|gb|EAL84600.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus Af293]
 gi|159122127|gb|EDP47249.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus A1163]
          Length = 444

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/398 (44%), Positives = 252/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K++     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSARLLKSYGVGVPKGEVAHSAEEAEAVAKSIGNDDMVIKAQVLAGGRGKGSFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFASQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK++P+ I    ID  +GVT +    +   L   
Sbjct: 151 AVLMDRATQTPVIVASSQGGMDIEAVAKEHPEAIMTTPIDIKVGVTDDIARKIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKTTIQNLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLNFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ + IP+V RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIARGLINVVEDMGLRIPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI ESGL + +  DL  AA+K V   K V
Sbjct: 391 GTNMEQAQKLINESGLKIFSIEDLQSAAEKSVQFSKVV 428


>gi|312211090|emb|CBX91176.1| similar to succinyl-CoA ligase subunit beta [Leptosphaeria
           maculans]
          Length = 443

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 179/398 (44%), Positives = 257/398 (64%), Gaps = 7/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHEY++ ALL  Y + V KG V ++   AE   K + G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LAIHEYRSAALLESYGIGVPKGGVATNAAEAEQIAKDIGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLK--SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                 KGGVRV  S +  S+++D  +++G  LITKQTG  G   N V++ D     RE 
Sbjct: 93  N---GFKGGVRVVYSPREASILAD--QMIGHKLITKQTGAAGRLCNSVFIVDRKFARREF 147

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR S     +AS+QGGMDIE VAK++P+ I    ID  +GVT +   ++   L 
Sbjct: 148 YLAILMDRASQGPVIVASSQGGMDIEAVAKEHPEAIITTPIDIHVGVTDDMARNIATELG 207

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              Q   D  D    LY+ F +KD + +EINPL    + ++  +D+K++FDDNA +R  +
Sbjct: 208 FSEQCIEDAKDTIQKLYRVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKE 267

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RDV++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GGAPANFLD
Sbjct: 268 VFSWRDVTQEDADEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLD 327

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + +  AF +ITSD  V  I +NIFGGI+RCD + KG++  V+E+ +  P++ R
Sbjct: 328 VGGGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIAR 387

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N++  ++L+ +SGL + +  DL  AA+K V   K
Sbjct: 388 LQGTNMEQAHKLLNDSGLKIFSIDDLQAAAEKSVQFSK 425


>gi|167041903|gb|ABZ06642.1| putative CoA-ligase [uncultured marine microorganism HF4000_133I24]
          Length = 390

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + + + +G +  S   AE   + + G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKKILSGFGISIPRGGIAYSPENAEYKAREIGGSKWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ + +S   V     ++LG  L+TKQTGP G  V+ VY+E+  DI +ELYL
Sbjct: 58  -------GGIIICNSKLEVAQATDKLLGKKLVTKQTGPQGKIVHRVYIEEVTDIKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+ DR S  +  +AST+GGM +EE++K  P+ I +  I+  +G+       +   L ++
Sbjct: 111 GLVFDRASECIMVVASTEGGMSVEEISKKKPESIIRSKIEAAVGMQRFQAREIAFGLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D     Y+AF + D +++EINPL+I K+  +  LD K+SFD+NAL+R   + 
Sbjct: 171 PKLISRTADAIIGCYRAFSELDATMVEINPLVISKDEHILALDCKMSFDNNALFRRNQVS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++E+  E+ A    L+YI+L+GNIG ++NGAGLAMA+MD+IKL GG PANFLDVG
Sbjct: 231 ELRDKAQENPNEVYASDRGLNYISLEGNIGNIINGAGLAMASMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +K+  AFK+I+ D  VK ILINIF GI RCD + +GI+ A++++KI++PL++RL 
Sbjct: 291 GGATPEKMVKAFKLISQDKKVKVILINIFAGINRCDWVAEGIVQALQKIKIDMPLIIRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  GN+++ ES +  I A  L+DAA K V A+K
Sbjct: 351 GTNVKKGNKILKESKIKYIEASTLEDAANKAVTALK 386


>gi|268534598|ref|XP_002632430.1| Hypothetical protein CBG00458 [Caenorhabditis briggsae]
 gi|187039142|emb|CAP21906.1| hypothetical protein CBG_00458 [Caenorhabditis briggsae AF16]
          Length = 415

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 177/395 (44%), Positives = 250/395 (63%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V K VV ++   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQKFVVAANRKEAEEKWMSFGNHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +      GGV +    K  +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  D-GTKGIGGVYITKEKKEALDAIDEMIGKRLVTKQTTEDGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P +IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQMGMTEAQSLKIAKELQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  DI 
Sbjct: 199 GKLLGAAATEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKDIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G+++AV ++ + +P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKQIMKKSGLKILTANNLDEAAAKAVESL 413


>gi|331004890|ref|ZP_08328307.1| Succinyl-CoA ligase (ADP-forming) beta chain [gamma proteobacterium
           IMCC1989]
 gi|330421344|gb|EGG95593.1| Succinyl-CoA ligase (ADP-forming) beta chain [gamma proteobacterium
           IMCC1989]
          Length = 388

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 185/386 (47%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ GV  ++   A +A  T+ G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGVAAATAEEAAAATDTIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V       LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDSKAEVKEFAESWLGKNLVTYQTDANGQPVSRILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K +IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRSIVFMASTEGGVEIEKVAEETPEKILKAIIDPLVGAQPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI+ D NALYR   I+
Sbjct: 171 PTQVKQFTKIFLGLAKMFEDFDFALLEINPLVITDEGNLHCLDGKINIDANALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A    L+Y+AL+GN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAASFELNYVALEGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD+SVK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+++RLE
Sbjct: 291 GGATKERVIEAFKLILSDTSVKAVLVNIFGGIVRCDMIAEGIIGAVEEVGVEVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G +L+  S LN++ A  L D
Sbjct: 351 GTNAEAGKKLLDASTLNLVGATSLTD 376


>gi|145485378|ref|XP_001428697.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395785|emb|CAK61299.1| unnamed protein product [Paramecium tetraurelia]
          Length = 425

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 188/406 (46%), Positives = 259/406 (63%), Gaps = 14/406 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRF 59
            ++HEYQ+K L+RK+NV V KG +  +  AA    KTL P    ++KSQ+HAGGRGKG  
Sbjct: 19  FDLHEYQSKDLMRKFNVLVQKGEIALNADAAAKVAKTLDPSGGLILKSQVHAGGRGKGT- 77

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LY
Sbjct: 78  --LSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLY 135

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+ ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+L
Sbjct: 136 LAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLTDQIANKVIDTLQL 195

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           Q   R    +   NLYK F   D + +EINP       +L  +D+KI+ DDNA +R  ++
Sbjct: 196 QA-VRQQAIEQLKNLYKMFITLDATQVEINPWATDPKNKLFCIDAKINVDDNAKFRQKEL 254

Query: 240 QELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            ELR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PAN
Sbjct: 255 IELRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGDPAN 314

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PL
Sbjct: 315 FLDVGGGANVEQVKTAFEILNSHPKVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPL 374

Query: 356 VMRLEGANVDIGNRLI-----AESGLNVITAIDLDDAAQKIVHAVK 396
           V+RL G N   G +++     +++ +++ TA DLDDAAQK V   K
Sbjct: 375 VVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIAK 420


>gi|119486728|ref|XP_001262350.1| succinyl-CoA synthetase beta subunit, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410507|gb|EAW20453.1| succinyl-CoA synthetase beta subunit, putative [Neosartorya
           fischeri NRRL 181]
          Length = 444

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 252/396 (63%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K++     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSARLLKSYGVGVPKGEVAHSAAEAEAVAKSIGNDDMVIKAQVLAGGRGKGSFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFASQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK++P+ I    +D  +GVT +    +   L   
Sbjct: 151 AVLMDRATQSPVIVASSQGGMDIEAVAKEHPEAIMTTPVDIKVGVTDDIARKIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKTTIQNLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLNFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ + IP+V RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIARGLINVVEDMGLRIPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +LI ESGL + +  DL  AA+K V   K
Sbjct: 391 GTNMEQAQKLINESGLKIFSIEDLQSAAEKSVQFSK 426


>gi|321250107|ref|XP_003191692.1| succinate-CoA ligase (ADP-forming) [Cryptococcus gattii WM276]
 gi|317458159|gb|ADV19905.1| Succinate-CoA ligase (ADP-forming), putative [Cryptococcus gattii
           WM276]
          Length = 418

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/386 (44%), Positives = 248/386 (64%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K +   S   AES  K+      V+K+Q+ AGGRGKG F 
Sbjct: 25  LSIHEYQSVQLLNSYGIPTPKALPAFSAAEAESVAKSFGKDELVIKAQVLAGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S         ++LG  LITKQTG  G   N V + +     +E Y 
Sbjct: 85  ---SGFQGGVQMVDSPAQAKEYAEKMLGHKLITKQTGAAGRICNAVMLAERMPPQKEYYA 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DRT+G    + S+QGGM+IE+VAK+ P  I    +D   G++S +   L   L  +
Sbjct: 142 AVLNDRTTGGPVLVTSSQGGMNIEDVAKETPDAIITTPLDFDNGISSAEALELAKKLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+ +  D+F  LY  F +KD + +EINPL  + NG++  +D+K  FDDNA +R  DI 
Sbjct: 202 ENAQKNAADVFAKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQADIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED++E+EA Q+ L++I LDG+IGC+VNGAGLAMATMD++ L+GG+PANFLDVG
Sbjct: 262 KLRDTTQEDAQEVEAAQYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  AF+++ +  +VK I +NIFGGIMRCDV+ +GI+ A KE+++ IPLV+RL+
Sbjct: 322 GGATADAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELQLEIPLVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G   +   ++I ESGL +     LD+
Sbjct: 382 GTKEEEAKKMIRESGLKIFPFDGLDE 407


>gi|255936143|ref|XP_002559098.1| Pc13g06650 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583718|emb|CAP91734.1| Pc13g06650 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 443

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 254/396 (64%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V +G V  +   AE+  K++ G   V+K+Q+ AGGRGKG+F 
Sbjct: 33  LSIHEYLSARLLKSYGVGVPQGDVAKTAEEAETIAKSIGGDDLVIKAQVLAGGRGKGQFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLVTKQTGAAGRICNSVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT+     ++S+QGGMDIE VAK+ P  I    ID  +GVT E   ++   L   
Sbjct: 150 AVLLDRTTRGPVIVSSSQGGMDIEAVAKESPDAIMTTPIDIHVGVTDEIARTIATDLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +      NLYK F ++D + LEINPL    + ++  +D+K+ FDDNA +R  +  
Sbjct: 210 EQCIEEAKSTIQNLYKCFMERDATQLEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEAF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RDV++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 270 SWRDVTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  + +NIFGGI+RCD + +G+++ V+E+ +  P++ RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVSAVFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIIARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI ESGL + +  DL +AA+K V   K
Sbjct: 390 GTNMEQAHKLINESGLKIFSIEDLQNAAEKSVQFSK 425


>gi|289209201|ref|YP_003461267.1| succinyl-CoA synthetase subunit beta [Thioalkalivibrio sp. K90mix]
 gi|288944832|gb|ADC72531.1| succinyl-CoA synthetase, beta subunit [Thioalkalivibrio sp. K90mix]
          Length = 386

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 180/395 (45%), Positives = 251/395 (63%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAKA  R   +PV  G VI+      +A + L     +VK+Q+H+GGRGK    
Sbjct: 1   MNLHEFQAKARFRDAGIPVPDGQVITHTDELPAAWQALGAERVLVKAQVHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S ++      ++LGS L+T Q+GP G  V+ + +E  ADI RE Y 
Sbjct: 58  -------GGVVMADSPEAAREAAEKLLGSRLVTGQSGPEGLPVDQLLLEPAADIAREFYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR    +A + S +GGMDIE +A + P+ +  L I P  GV       +   L L 
Sbjct: 111 ALLVDRARERLALVVSAEGGMDIETLAAERPEAVITLPIHPATGVMPFHGRRVAFALGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L  N +  F   D  LLEINPL++  + +L  +D+K++ DD+A YR   + 
Sbjct: 171 GEPAKAMAQLVTNAHALFQQVDAQLLEINPLVLTADDQLLAIDAKLTVDDSAAYRQKALM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA +H+L+YI LDG+IGCMVNGAGLAMATMD+IK +GG PANFLDVG
Sbjct: 231 AERDARQRDPAEEEAHEHDLNYIRLDGSIGCMVNGAGLAMATMDLIKHHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   ++V AAFK+I SD SVK +L+NIFGGI+RCD++ +GI++A++EV++ +P+V+RLE
Sbjct: 291 GGTTVERVTAAFKLILSDPSVKAVLVNIFGGIVRCDLIAEGIIAAIREVQVQVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G   +A SGL+VI A DLD AA+ +V AV
Sbjct: 351 GTNAEQGREALASSGLDVIPAADLDRAARTVVEAV 385


>gi|291288247|ref|YP_003505063.1| succinyl-CoA synthetase, beta subunit [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885407|gb|ADD69107.1| succinyl-CoA synthetase, beta subunit [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 404

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 181/396 (45%), Positives = 254/396 (64%), Gaps = 14/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK LLR Y VPV  G V S+   A    K L    +V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKGLLRTYGVPVPDGGVASTASDALRVAKELHSDRWVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V      +      +LG  ++TKQTG  G  V  + VE   DI +E+Y+
Sbjct: 58  -------GGVKVVDVFSDLYDLSANMLGMKIVTKQTGDEGKIVRRILVEKATDIKQEIYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S     IAS++GG++IE+VA   P+K+ K  I+P+ G+       +   + L 
Sbjct: 111 SFLVDRDSEQHMIIASSEGGVEIEQVAAKTPEKVIKERINPVTGMGQFLGRKIAKKMGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LY+ F D D  +LEINPL++  +G +  LD+K+S D+NAL+RH  I+
Sbjct: 171 SSLLNKFADVTNKLYQCFIDHDGMMLEINPLVVTGSGDIVCLDAKMSVDENALFRHRAIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E++D  E + +E+ A   +LSY++++GNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EMKDYGELEPQEVRASIFDLSYVSMEGNIGCMVNGAGLAMATMDIIKSYGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +KV  AFKII +D  VK I +NIFGGI+RCD++ +G+L A +EV  +  +V+RL+
Sbjct: 291 GGADVNKVREAFKIILTDPKVKVIFVNIFGGIVRCDLIAQGVLKASEEVPGDRYIVVRLD 350

Query: 361 GANVDIGNRLI----AESGLNVITAIDLDDAAQKIV 392
           G NV+ G +++    ++SGLN++T   + DAA+K V
Sbjct: 351 GTNVEEGKKILEDGASKSGLNIVTGDTMADAAEKAV 386


>gi|154345998|ref|XP_001568936.1| succinyl-CoA ligase [GDP-forming] subunit beta [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134066278|emb|CAM44069.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 413

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 179/397 (45%), Positives = 252/397 (63%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +++     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKKIIKDNGGKVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  V+ +YV +  ADI RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVSTLYVTEAIADIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    F+ S +GG  IEE+AK  P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFVGSAEGGTSIEELAKTNPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    LY      D +++EINP + +KNG +  +D+K+SFDDNA +R   I
Sbjct: 197 SGETAEHAAEQIKTLYNIGKSNDCTMVEINPFVELKNGDVMEIDAKLSFDDNAAFRQKAI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D +  DS+E+ AK+H+L+YIAL+GN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FSLEDQTMIDSKEVLAKKHDLNYIALEGNVGCLVNGAGLAMATMDAISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A + ++ +AFKIIT D  VK IL+NIFGGIM CDV+ +G+++A K +   IP+V+RL
Sbjct: 317 GGSASEAQIVSAFKIITGDPHVKSILVNIFGGIMHCDVIAQGVVNASKTLSTTIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I+ SGL + +A D D AA+K V   K
Sbjct: 377 CGTNEQRGKDIISNSGLAIHSADDFDSAARKAVELAK 413


>gi|317157723|ref|XP_003190872.1| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus oryzae
           RIB40]
 gi|317157725|ref|XP_001826545.2| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus oryzae
           RIB40]
          Length = 443

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 249/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  LL+ Y V + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEHLSAKLLKSYGVGMPKGEVAYSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRQSQSPVIVASSQGGMDIEAVAKETPEAIITTPIDIKVGVTDEIAGKIATELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCITEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVNEMGLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++L+ ESGL + +  DL +AA+K V   K
Sbjct: 390 GTNMEQAHKLLNESGLKIFSIEDLQNAAEKSVQFSK 425


>gi|86153239|ref|ZP_01071443.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85842965|gb|EAQ60176.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 387

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 187/393 (47%), Positives = 250/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QT P G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTRPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTTEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILKATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|158520091|ref|YP_001527961.1| succinyl-CoA synthetase, beta subunit [Desulfococcus oleovorans
           Hxd3]
 gi|226734944|sp|A8ZRW7|SUCC_DESOH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|158508917|gb|ABW65884.1| succinyl-CoA synthetase, beta subunit [Desulfococcus oleovorans
           Hxd3]
          Length = 388

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 189/386 (48%), Positives = 248/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHE+Q K L R Y +P  +G ++++  AA  A   L G   VVK+QIHAGG       
Sbjct: 1   MKIHEFQTKELFRTYGIPTPEGRMVNTAEAAGEAAGELGGFPVVVKAQIHAGG------- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     S    +LGS L+T QTGP G+ V  V VE G  I +ELYL
Sbjct: 54  ---RGKGGGVKLAKSADEAKSLAGAMLGSRLVTPQTGPEGTLVQKVLVEQGVSIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  +  +AS  GGMDIE VA+  P+KI K+ ++PL G+++         L L 
Sbjct: 111 SVVADRETAGIVIMASEAGGMDIEAVAETTPEKILKVFVNPLAGLSAFHCRQAAYGLNLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A      +   L+K F D D SL+EINPLI+  +  +  LD+KI+FDD+AL+RH DI 
Sbjct: 171 AEAIKPFTQVVSGLFKLFVDYDASLVEINPLILTTDKAVMALDAKINFDDSALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED  E+EA + NL+YI +DGN+G MVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 231 ALRDTDEEDPLEVEASRFNLNYINMDGNVGNMVNGAGLAMATMDIIKLAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + V   F+II SD  VK IL+NIFGGI+RCDVL  GI+ A +   I++PLV+R+E
Sbjct: 291 GGANAEMVENGFRIILSDPKVKCILVNIFGGILRCDVLASGIVQAARNTAIHVPLVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NVD G R++AESGL++ +A  L D
Sbjct: 351 GTNVDEGKRILAESGLDLHSAASLKD 376


>gi|195377210|ref|XP_002047385.1| GJ11957 [Drosophila virilis]
 gi|194154543|gb|EDW69727.1| GJ11957 [Drosophila virilis]
          Length = 415

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 255/397 (64%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +      A+++     YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKDDTQAVQSFDCDEYVVKAQILAGGRGKGIFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSDVLSLSKQMIGNRLITKQTPKSGILVNKVMVARSVNITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA + P+KI  + +     +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAAETPEKIKTVPLSINKPIPEAVLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D   +EINPL    NG +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDTVQRCADEIQKLYTLFKAVDAVQIEINPLAETDNGEVISVDAKLNFDDNAEFRQKDIF 259

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            L D  EED+  RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 AL-DTHEEDADPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+R
Sbjct: 319 VGGGVQEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV     ++  SGL + TA DLDDAAQK V A+
Sbjct: 379 LEGTNVTKAREILKNSGLPIQTASDLDDAAQKAVAAL 415


>gi|238926406|ref|ZP_04658166.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC
           43531]
 gi|304438123|ref|ZP_07398066.1| succinyl-CoA ligase subunit beta [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|238885810|gb|EEQ49448.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC
           43531]
 gi|304368896|gb|EFM22578.1| succinyl-CoA ligase subunit beta [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 396

 Score =  336 bits (861), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 177/401 (44%), Positives = 254/401 (63%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   +V  A +  + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREFGVNVPNGLPAFTVDEAVANAEKLSTPVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +  +E+LG TL+T QTGP G  VN + +E+G+ I +E YL
Sbjct: 58  -------GGVKIAKNKDEVRAYAQELLGKTLVTHQTGPEGKVVNRLLIEEGSKIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR +  +  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 111 SFVVDRQTASIVMMGSEEGGVEIEKVAAESPEKIIKEYIDPVIGLAPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      L   LY AF  KD S +EINPL++ ++  +  LD+K++FDD+AL+RH DI 
Sbjct: 171 GPAVRKAAALMQGLYAAFIGKDCSQVEINPLVVTEDDDVIALDAKLNFDDSALFRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E EA    L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 231 ELRDETEEDPKEREAAAAGLNYVNLGGDVACMVNGAGLAMATVDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G ++ +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSEPEKIAKAFSIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKIISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 351 VVRLEGTKVEEGREILKNTPIGNVFPAPTMEGGAEQIVKLV 391


>gi|259483689|tpe|CBF79284.1| TPA: succinyl-CoA synthetase beta subunit, putative
           (AFU_orthologue; AFUA_4G04520) [Aspergillus nidulans
           FGSC A4]
          Length = 440

 Score =  336 bits (861), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 179/396 (45%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE   K+L     V+K+Q+ AGGRGKG F 
Sbjct: 30  LSIHEYLSANLLKSYGVGVPKGEVARSAEEAEKVAKSLGNDDMVIKAQVLAGGRGKGHFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N V++ +     RE YL
Sbjct: 90  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAGGRLCNAVFIVERKFARREFYL 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK+ P  I    ID  +GVT      + + L   
Sbjct: 147 AVLMDRKTQGPVIVASSQGGMDIEAVAKENPDAIITTPIDINVGVTDAIATKIANELGFS 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYKAF + D + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 207 EQCVDDAKKTIQNLYKAFMETDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 267 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 326

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 327 GGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVARLQ 386

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI ESGL + +  DL  AA+K V   K
Sbjct: 387 GTNMEQAHKLINESGLKIFSIEDLQSAAEKSVQFSK 422


>gi|163783578|ref|ZP_02178568.1| succinyl-CoA ligase beta subunit [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881198|gb|EDP74712.1| succinyl-CoA ligase beta subunit [Hydrogenivirga sp. 128-5-R1-1]
          Length = 383

 Score =  336 bits (861), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 178/397 (44%), Positives = 252/397 (63%), Gaps = 14/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  +Y +PV +G V  ++  A    + L     VVK+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKEIFARYGLPVPEGKVAFTLKEARQVAEELGSFPLVVKAQVHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   +  +   +  +LG  L T Q  P G  VN V++E    I +E YL
Sbjct: 58  -------GGVKIVKDMDELEQAVEGMLGKVLKTFQC-PDGKPVNRVWIEKATAIDKEYYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       +AS+ GGM+IEEVAK+ P+ I    +DP +G+       L   L L 
Sbjct: 110 SITLDRARSKPIVMASSAGGMEIEEVAKENPEAIIIEEVDPALGLMPHQARKLAFKLGLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY+ + D D SL+EINPL++ K+G L  LD+K+  DDNAL+RH DI+
Sbjct: 170 VK---DFSKMLLTLYRVYIDLDASLVEINPLVLDKDGNLIALDAKLDVDDNALFRHKDIE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+    E+EA ++ L+YI L GNIGCMVNGAGLAMATMDI+KL GG PANFLDVG
Sbjct: 227 EMEDESQISPLEVEANKYGLNYIKLSGNIGCMVNGAGLAMATMDIVKLAGGEPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A AF+I+ +D  VK + INIFGGI+RCD L +G++ A K V++++P+V+R+E
Sbjct: 287 GGANVEQIANAFRILMADEDVKAVFINIFGGILRCDRLAQGLVEAGKVVELSVPIVVRME 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESG+N I A D+ D A+K V    G
Sbjct: 347 GTNVDEGKKILAESGMNFINAEDMWDGAKKAVELAGG 383


>gi|320103226|ref|YP_004178817.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Isosphaera
           pallida ATCC 43644]
 gi|319750508|gb|ADV62268.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Isosphaera
           pallida ATCC 43644]
          Length = 422

 Score =  336 bits (861), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 195/410 (47%), Positives = 252/410 (61%), Gaps = 25/410 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+     V  G   +S   A      L G L VVK+Q+HAGGRGKG   
Sbjct: 1   MNIHEYQAKALLKAAGAAVPAGEPATSAEEAARIYDVLGGGLMVVKAQVHAGGRGKGVAV 60

Query: 61  ELPADSKG--------------------GVRVESSLKSVISDIREI----LGSTLITKQT 96
           + P+D                       GVR    L     + R++    LG+TL+T QT
Sbjct: 61  K-PSDPSNPVADLATAYEIACGRAAAPEGVRRGVKLVRSREEARQVAEGLLGATLVTYQT 119

Query: 97  GPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK 156
           GP+GS V+ V V  G DI RELYL + VDRT      IAST+GG+DIE VA   P+KI +
Sbjct: 120 GPSGSPVHTVLVTVGHDIDRELYLGMTVDRTLKCPVLIASTEGGVDIETVAAQTPEKIHR 179

Query: 157 LLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
             ID  + +       +   L L G A  +G      L   F DKD++L EINPLI+ K+
Sbjct: 180 EPIDVGLRLRDFQARKVARALGLTGAAAKNGQKFLAALVDLFLDKDVALAEINPLIVTKD 239

Query: 217 GRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGA 276
            ++  LD+KISFDDNAL+RH +I  +RDV EED  E+ A Q  LSY++LDG+I C+VNGA
Sbjct: 240 HQVLALDAKISFDDNALFRHPEIAAMRDVQEEDPAELRAAQAGLSYVSLDGDIACLVNGA 299

Query: 277 GLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD 336
           GLAM+TMDIIK +GGAPANFLDVGGGA +++V   F+I+ +   VK +L+NIFGGIMRCD
Sbjct: 300 GLAMSTMDIIKYHGGAPANFLDVGGGASKEQVQEGFRILLASPRVKAVLVNIFGGIMRCD 359

Query: 337 VLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +   +L+A  E++ N+PLV+RLEG NV  G  L+ +SG  +ITA  L D
Sbjct: 360 TIAGALLAAYDELQFNLPLVVRLEGTNVKEGKALLEQSGRPIITADGLTD 409


>gi|94970901|ref|YP_592949.1| succinyl-CoA synthetase subunit beta [Candidatus Koribacter
           versatilis Ellin345]
 gi|189046868|sp|Q1IJS5|SUCC_ACIBL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94552951|gb|ABF42875.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Koribacter versatilis Ellin345]
          Length = 392

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 193/405 (47%), Positives = 257/405 (63%), Gaps = 21/405 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQ KA+LRKY V V +G ++++   AE     L        VVK+QIHA      
Sbjct: 1   MKIHEYQGKAILRKYGVAVPRGEMVTTREEAERVANDLMHDGAKGVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S+        +ILG TLIT QTGP G +V  + +E+   I RE
Sbjct: 55  ----GGRGKGGGVKIAKSVDEAGQLAGKILGMTLITHQTGPEGKKVQRLLIEETLPIERE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYLS+++DR++G   F+AS  GGM+IEEVA   P  I K  I+P  G+ +     +   L
Sbjct: 111 LYLSIVLDRSNGKPVFMASAAGGMEIEEVAAKDPNAIIKEWIEPGYGLGAFQARKIAFKL 170

Query: 178 ----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               EL GQA          LYK + + D SL+EINP I   + RL  LD+K +FDDN L
Sbjct: 171 GLKPELIGQAV----KFMQALYKTYDETDASLVEINPFITTSDNRLFALDAKFNFDDNGL 226

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH D+++LRDV+EED  E+EA ++ L+YI LDG +GCMVNGAGLAMATMDII+  GG P
Sbjct: 227 FRHPDLKDLRDVTEEDPLEVEASKYGLNYIKLDGTVGCMVNGAGLAMATMDIIQYAGGMP 286

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA+ ++V  AF+I+ SD +VK +LINIFGGI+R D L  G++ A  + KI +
Sbjct: 287 ANFLDVGGGANAEQVTHAFEILLSDKNVKAVLINIFGGILRVDTLATGVVQAATQTKIQL 346

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           P+V+RLEG NV+ G  ++ +SGLN I A  + DAA+K+V A KGV
Sbjct: 347 PIVLRLEGTNVEQGREILQKSGLNFIVAETMKDAAEKVVAAAKGV 391


>gi|59711432|ref|YP_204208.1| succinyl-CoA synthetase subunit beta [Vibrio fischeri ES114]
 gi|197334694|ref|YP_002155587.1| succinyl-CoA synthetase beta chain [Vibrio fischeri MJ11]
 gi|75354344|sp|Q5E6M6|SUCC_VIBF1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734996|sp|B5FC28|SUCC_VIBFM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|59479533|gb|AAW85320.1| succinyl-CoA synthetase, beta subunit [Vibrio fischeri ES114]
 gi|197316184|gb|ACH65631.1| succinyl-CoA synthetase beta chain [Vibrio fischeri MJ11]
          Length = 388

 Score =  335 bits (859), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 249/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG+DIE++A++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASQRIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGNMFAQYDLALLEINPLVVTAEGSLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G++ +AESGLN+I A  L
Sbjct: 351 GNNAPLGSQKLAESGLNIIAATSL 374


>gi|301065049|ref|ZP_07205394.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
 gi|300440898|gb|EFK05318.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
          Length = 393

 Score =  335 bits (859), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 186/400 (46%), Positives = 255/400 (63%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  K+ +PV  G V +    A    + + GP +VVK+Q+HAGGRGKG   
Sbjct: 1   MKIHEYQAKEIFGKWGIPVPNGRVATDPDEAGKVCEMINGPPWVVKAQVHAGGRGKGGGV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  +            +V+S  + +LGS+L+T QTGP G +VN V +E+G DI RE YL
Sbjct: 61  KVVMEKD----------AVVSTAKSLLGSSLVTPQTGPEGVKVNQVLIEEGVDIDREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
            ++VDR + M A I S  GGM IEEVA   P+ I+   +DP  G     + ++A   D L
Sbjct: 111 GMVVDRAAAMPAMIFSPAGGMSIEEVAAQTPELIWTECVDPATGWMPYQARNLAYRLDPL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                 R +  ++  NLYK F   D SL+EINPLII K G++  LD+K++ DDNAL+R  
Sbjct: 171 PSTETLR-ELINVMANLYKVFMSLDCSLVEINPLIITKAGKVLALDAKLNIDDNALFRQK 229

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I +L D S  D  E+ A  +NL+YI LDGNIG MVNGAGLAMATMD+IK  G  PANFL
Sbjct: 230 EIVKLEDTSGTDPLELTAAAYNLNYIRLDGNIGAMVNGAGLAMATMDLIKGAGAEPANFL 289

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA ++ +   F+II  D  V+ IL+NIFGGI+RCDVL +G+++A ++ +I +PL++
Sbjct: 290 DVGGGATEEMITKGFEIILGDDRVRAILVNIFGGILRCDVLARGVVAAAQKSRIQVPLIV 349

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NVD G +++  SGL  + A DL +AA  +   V G
Sbjct: 350 RLEGTNVDEGRKILEGSGLKFLVAKDLSEAAGLVAAQVSG 389


>gi|17539378|ref|NP_501266.1| hypothetical protein C50F7.4 [Caenorhabditis elegans]
 gi|1710876|sp|P53589|SUCB2_CAEEL RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
           beta, mitochondrial; AltName: Full=Succinyl-CoA
           synthetase beta chain; Short=SCS-beta; Flags: Precursor
 gi|1118094|gb|AAA83304.1| Hypothetical protein C50F7.4 [Caenorhabditis elegans]
          Length = 415

 Score =  335 bits (858), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 177/395 (44%), Positives = 250/395 (63%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V   VV S+   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +     + +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  N-GTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P++IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDLQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  +I 
Sbjct: 199 GKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G++SAV ++ +N+P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKQIMKKSGLKILTANNLDEAAAKAVSSL 413


>gi|218508840|ref|ZP_03506718.1| succinyl-CoA synthetase subunit beta [Rhizobium etli Brasil 5]
          Length = 259

 Score =  335 bits (858), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 170/259 (65%), Positives = 210/259 (81%)

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAF 198
           GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L G A  D   LFP LYKAF
Sbjct: 1   GGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISSALKLDGAAAEDAKSLFPLLYKAF 60

Query: 199 CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQH 258
            +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++ LRD +EED++EIEA + 
Sbjct: 61  NEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVRALRDETEEDAKEIEASKW 120

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSD 318
           +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVGGGA ++KVAAAFKIIT+D
Sbjct: 121 DLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITAD 180

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
             V+ IL+NIFGGIM+CDV+ +G+++AVKEV   +PLV+RLEG NV++G +++ ESGL +
Sbjct: 181 PKVESILVNIFGGIMKCDVIAEGVIAAVKEVGFKVPLVVRLEGTNVELGKKILNESGLAI 240

Query: 379 ITAIDLDDAAQKIVHAVKG 397
             A DLDDAA+KIV A+ G
Sbjct: 241 TAADDLDDAAKKIVAAING 259


>gi|71747842|ref|XP_822976.1| succinyl-CoA ligase [GDP-forming] beta-chain [Trypanosoma brucei]
 gi|70832644|gb|EAN78148.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           brucei]
          Length = 506

 Score =  335 bits (858), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 177/391 (45%), Positives = 258/391 (65%), Gaps = 8/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+KALL++       GV  SS+   E+A+  + G   VVKSQI AGGRG G F 
Sbjct: 109 LNIHEYQSKALLKEGGCKTEFGVACSSIEEVEAALGKIKGDKKVVKSQILAGGRGMGTFV 168

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     KGGV V       ++  R +L +TL+TKQTGP G +V+ +YV +  + I RELY
Sbjct: 169 D---GFKGGVHVCKDAAEALACARRMLNNTLVTKQTGPKGQKVSRLYVTEAISGIKRELY 225

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +    FI S +GGM IEE+A+  P KI K+ I+   G+  ++  +    L  
Sbjct: 226 LALLLDRKTASPVFIGSAEGGMGIEELAQKQPDKIKKMRINVQEGINHDNCLTFAHELGF 285

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A  +  +    LY     KD +++EINPL+ ++NG +  +D+K+SFDDNA +R  DI
Sbjct: 286 TGRAAENAAEQIKALYNVGKSKDCTMVEINPLVELENGDVMCIDAKLSFDDNAEFRQHDI 345

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I   GG PANFLDV
Sbjct: 346 FALADATQIDPKEVVAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISHGGGKPANFLDV 405

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN----IPL 355
           GG A ++++ AAF+IIT D +V+ IL+NIFGGIMRCD + +GI++A + +K      +P+
Sbjct: 406 GGSATKEQIVAAFEIITGDEAVRSILVNIFGGIMRCDTIAEGIVAASRMLKSKGVREVPV 465

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           V+RL G+  + G R++ ESGL +  A + ++
Sbjct: 466 VVRLSGSKEEEGKRILKESGLPLHPAQNFEE 496


>gi|145548656|ref|XP_001460008.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427836|emb|CAK92611.1| unnamed protein product [Paramecium tetraurelia]
          Length = 425

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 185/406 (45%), Positives = 261/406 (64%), Gaps = 14/406 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
            ++HEYQ+K L+R++NV V KG + +++  AA+ A K  P    ++KSQ+HAGGRGKG  
Sbjct: 19  FDLHEYQSKDLMRRFNVQVQKGEIALNAEEAAKVAKKLDPSGGLILKSQVHAGGRGKGT- 77

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LY
Sbjct: 78  --LSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLY 135

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           ++ ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+L
Sbjct: 136 IAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLTDQIANKVIDTLQL 195

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           Q   R    +   NLYK F   D + +EINP       +L  +D+KI+ DDNA +R  ++
Sbjct: 196 QA-VRQQAIEQLKNLYKMFITLDATQVEINPWATDPKNKLFCIDAKINVDDNAKFRQKEL 254

Query: 240 QELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            ELR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PAN
Sbjct: 255 IELRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGDPAN 314

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PL
Sbjct: 315 FLDVGGGANVEQVKTAFEILNSHPKVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPL 374

Query: 356 VMRLEGANVDIGNRLI-----AESGLNVITAIDLDDAAQKIVHAVK 396
           V+RL G N   G +++     +++ +++ TA DLDDAAQK V   K
Sbjct: 375 VVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIAK 420


>gi|209694427|ref|YP_002262355.1| succinyl-CoA synthetase subunit beta [Aliivibrio salmonicida
           LFI1238]
 gi|226734919|sp|B6EHV6|SUCC_ALISL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|208008378|emb|CAQ78533.1| succinyl-CoA synthetase beta chain [Aliivibrio salmonicida LFI1238]
          Length = 388

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 248/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTAQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  V VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDAKGQPVTKVLVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQAFQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G++ +AESGLN+I A  L
Sbjct: 351 GNNAPLGSQKLAESGLNIIAATSL 374


>gi|152992172|ref|YP_001357893.1| succinyl-CoA synthetase subunit beta [Sulfurovum sp. NBC37-1]
 gi|189030222|sp|A6Q7S7|SUCC_SULNB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151424033|dbj|BAF71536.1| succinyl-CoA synthase, beta subunit [Sulfurovum sp. NBC37-1]
          Length = 391

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 181/388 (46%), Positives = 244/388 (62%), Gaps = 12/388 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y VP  KG++  SV AA  A K L GP++VVK+QIHA         
Sbjct: 1   MNVHEYQAKQIFAEYGVPTPKGIMAESVDAAVEAAKELGGPIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG TL+T QTGP G  V  +Y+EDGADI  E YL
Sbjct: 52  -GGRGLGGGVKLAKSLDEVRELADEILGMTLVTHQTGPEGKLVQKLYIEDGADIKDEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR   M   +AST+GGM+IE+VA++ P+KI  + +DP IG        L   L + 
Sbjct: 111 SVILDRKLEMPLIMASTEGGMNIEDVAENTPEKIITVPVDPTIGFQGFHGRELAFGLGIT 170

Query: 181 GQARIDGGDLFPN-LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A       F   LYK + DKD  ++EINPL+   +G    LD K+ FD++ALYR  +I
Sbjct: 171 DKAEQKNIITFAQKLYKLYMDKDAEMIEINPLVRTGSGEFLALDGKMGFDNSALYRQPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             +RD+SEED  E+EA ++ LSY+ALDG IGCMVNGAGLAM TMD I   GG PANFLDV
Sbjct: 231 AAMRDLSEEDPDEVEAAKYGLSYVALDGEIGCMVNGAGLAMGTMDTINHMGGTPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A+ + VA  F+II  + +VK I +NIFGGI+RCD +  GI+ A K   +++P+++RL
Sbjct: 291 GGSANAETVAKGFEIILKNPNVKAIFVNIFGGIVRCDRIANGIIEATKITDVHVPVIVRL 350

Query: 360 EGANVDIGNRLIAESGL-NVITAIDLDD 386
           +G N      ++  + + N+I A DL D
Sbjct: 351 DGTNAPEAAEILKNANISNLIVAEDLGD 378


>gi|260796003|ref|XP_002592994.1| hypothetical protein BRAFLDRAFT_117780 [Branchiostoma floridae]
 gi|229278218|gb|EEN49005.1| hypothetical protein BRAFLDRAFT_117780 [Branchiostoma floridae]
          Length = 450

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 176/395 (44%), Positives = 255/395 (64%), Gaps = 7/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LLR   V   +G V  +   A    K L G   V+K+Q+ AGGRGKG F 
Sbjct: 39  LSLHEYHSLQLLRDAGVVTPRGEVARTPEEAFELAKKLGGEDVVIKAQVLAGGRGKGSF- 97

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV++  S +       ++LG  + TKQTG  G   N V + +     RE 
Sbjct: 98  ----DSGLKGGVKIVFSAEECKDIATKMLGHKIFTKQTGEAGRICNEVLLVERLYPRREF 153

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y +++++R  G  A +AS+QGG++IEE+A++YP  I K  ID + G++ +    +   + 
Sbjct: 154 YFAIVMERAYGGPAIVASSQGGVNIEEIAEEYPDAIIKEGIDIVEGLSIDQARGVAAKMN 213

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            Q + + +  ++   +Y+ F   D +++EINP+    NG++  +D+K+ FDDNA YR  D
Sbjct: 214 FQKELQEEAAEMMVKIYEMFSRTDATMVEINPMSEDSNGKVYCMDAKVRFDDNAEYRQKD 273

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED R+I+A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG+PANFLD
Sbjct: 274 IFALRDWSQEDERDIQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGSPANFLD 333

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA   +V  AFK+ITSD +V+ I++NIFGGIMRCDV+ +GI+ A  E+ + +P+V+R
Sbjct: 334 VGGGATAAQVTEAFKLITSDPNVQAIMVNIFGGIMRCDVIAQGIIEAATELDLKVPIVVR 393

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G  VD    LIA SGL ++   +LDDAA+  V 
Sbjct: 394 LQGTQVDDAKALIAASGLRILACDNLDDAAKMAVR 428


>gi|294871826|ref|XP_002766061.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239866626|gb|EEQ98778.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 421

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 171/393 (43%), Positives = 254/393 (64%), Gaps = 2/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+Q+  + +KY V V  G    +   AE   K L G   VVK+Q+ AGGRG+G FK
Sbjct: 27  LNLHEHQSLNVFKKYGVCVPHGYYAKTPEEAEQFAKALGGGDVVVKAQVLAGGRGRGHFK 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     +GGV +  +         +++G+TL+TKQTG  G   N V++ +   I  E Y 
Sbjct: 87  E--NGFQGGVHIVKNPIEAKDLASKMIGNTLVTKQTGEAGKICNGVFLSERFQIASEKYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+ G    + S  GGM IE+VA ++P+ I K+ +D   G++  +   + + ++ +
Sbjct: 145 AILMDRSFGGPVMVGSKYGGMSIEDVAAEHPEAIIKIPVDINSGISDGEAREMAEKIDFE 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +       LY+ F   D +++EINPL   K+GR+ V D+K++FDDNA +R  DI 
Sbjct: 205 GEIVDEAVIAIKALYETFRQSDCTMVEINPLAETKDGRVMVCDAKVNFDDNAQFRQKDIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMD++ L GG+PANFLDVG
Sbjct: 265 SQRDITQEDPREVAASKWDLNYIGLDGNIGCMVNGAGLAMATMDLLSLKGGSPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ D+V AAF+I+  D  VK IL+NIFGGIMRCDV+ +G++ A+ E+ +  P+V+RL 
Sbjct: 325 GAAETDQVRAAFEILEKDPKVKSILVNIFGGIMRCDVIAQGVVQAMSELNMEKPIVIRLV 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+ G ++I ++GL V    DL++AA K V 
Sbjct: 385 GTNVEQGKKIIKDAGLKVYAFDDLNEAAAKAVE 417


>gi|261332823|emb|CBH15818.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 507

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 177/391 (45%), Positives = 258/391 (65%), Gaps = 8/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+KALL++       GV  SS+   E+A+  + G   VVKSQI AGGRG G F 
Sbjct: 110 LNIHEYQSKALLKEGGCKTEFGVACSSIEEVEAALGKIKGDKKVVKSQILAGGRGMGTFV 169

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELY 119
           +     KGGV V       ++  R +L +TL+TKQTGP G +V+ +YV +  + I RELY
Sbjct: 170 D---GFKGGVHVCKDAAEALACARRMLNNTLVTKQTGPKGQKVSRLYVTEAISGIKRELY 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +    FI S +GGM IEE+A+  P KI K+ I+   G+  ++  +    L  
Sbjct: 227 LALLLDRKTASPVFIGSAEGGMGIEELAQKQPDKIKKMRINVQEGINHDNCLTFAHELGF 286

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A  +  +    LY     KD +++EINPL+ ++NG +  +D+K+SFDDNA +R  DI
Sbjct: 287 TGRAAENAAEQIKALYNVGKSKDCTMVEINPLVELENGDVMCIDAKLSFDDNAEFRQHDI 346

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I   GG PANFLDV
Sbjct: 347 FALADATQIDPKEVVAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISHGGGKPANFLDV 406

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN----IPL 355
           GG A ++++ AAF+IIT D +V+ IL+NIFGGIMRCD + +GI++A + +K      +P+
Sbjct: 407 GGSATKEQIVAAFEIITGDEAVRSILVNIFGGIMRCDTIAEGIVAASRMLKSKGVREVPV 466

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           V+RL G+  + G R++ ESGL +  A + ++
Sbjct: 467 VVRLSGSKEEEGKRILKESGLPLHPAQNFEE 497


>gi|294941730|ref|XP_002783211.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239895626|gb|EER15007.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 421

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 171/393 (43%), Positives = 254/393 (64%), Gaps = 2/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+Q+  + +KY V V  G    +   AE   K L G   VVK+Q+ AGGRG+G FK
Sbjct: 27  LNLHEHQSLNVFKKYGVCVPHGYYAKTPEEAEQFAKALGGGDVVVKAQVLAGGRGRGHFK 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     +GGV +  +         +++G+TL+TKQTG  G   N V++ +   I  E Y 
Sbjct: 87  E--NGFQGGVHIVKNPIEAKDLASKMIGNTLVTKQTGEAGKICNGVFLSERFQIASEKYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+ G    + S  GGM IE+VA ++P+ I K+ +D   G++  +   + + ++ +
Sbjct: 145 AILMDRSFGGPVMVGSKYGGMSIEDVAAEHPEAIIKIPVDINSGISDGEAREMAEKIDFE 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +       LY+ F   D +++EINPL   K+GR+ V D+K++FDDNA +R  DI 
Sbjct: 205 GEIVDEAVIAIKALYETFRQSDCTMVEINPLAETKDGRVMVCDAKVNFDDNAQFRQKDIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMD++ L GG+PANFLDVG
Sbjct: 265 SQRDITQEDPREVAASKWDLNYIGLDGNIGCMVNGAGLAMATMDLLSLKGGSPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ D+V AAF+I+  D  VK IL+NIFGGIMRCDV+ +G++ A+ E+ +  P+V+RL 
Sbjct: 325 GAAETDQVRAAFEILEKDPKVKSILVNIFGGIMRCDVIAQGVVQAMSELNMEKPIVIRLV 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+ G ++I ++GL V    DL++AA K V 
Sbjct: 385 GTNVEQGKKIIKDAGLKVYAFDDLNEAAAKAVE 417


>gi|85110202|ref|XP_963313.1| succinyl-CoA ligase beta-chain [Neurospora crassa OR74A]
 gi|21264057|sp|Q9P567|SUCB_NEUCR RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
           beta, mitochondrial; AltName: Full=Succinyl-CoA
           synthetase beta chain; Short=SCS-beta; Flags: Precursor
 gi|7981341|emb|CAB92021.1| probable beta-succinyl CoA synthetase precursor [Neurospora crassa]
 gi|28924988|gb|EAA34077.1| succinyl-CoA ligase beta-chain [Neurospora crassa OR74A]
          Length = 447

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 179/396 (45%), Positives = 246/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V KG V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGIGVPKGDVARTGAEAEAIAKQIGGEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   + VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 154 AVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK FC+KD + +EINPL    + ++  +D+K  FDDNA +R  DI 
Sbjct: 214 EQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADFRQPDIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED  E+ A Q  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 KLRDTTQEDPDEVRAAQAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + IP++ RL+
Sbjct: 334 GGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +LI +SG+ + +  DL  AA+K V   K
Sbjct: 394 GTNMEAARQLINDSGMKIFSIDDLQSAAEKSVQLSK 429


>gi|153952227|ref|YP_001398439.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|189046904|sp|A7H4K9|SUCC_CAMJD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|152939673|gb|ABS44414.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 387

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 188/393 (47%), Positives = 249/393 (63%), Gaps = 17/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +   KG V  SV  A S  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           ++L +R +  +  IAS++GGMDIE+VAK+ P KI K+ IDP IG       +VA +  + 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPGKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + +G+  I    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH 
Sbjct: 171 KDEGKKLIS---MIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFL
Sbjct: 228 EIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+
Sbjct: 288 DVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVV 347

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           RL+G N      ++  S L N+  A +L + A+
Sbjct: 348 RLDGTNAAEAKTILDNSNLKNIKAATNLKNGAE 380


>gi|241997698|ref|XP_002433498.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
 gi|215490921|gb|EEC00562.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
          Length = 422

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L+    V V +  V  ++  A+   KTL    +V+K+QI AGGRGKG F 
Sbjct: 30  LNLHEYQSKQLMANNGVTVQRFKVAGNMLEAQEISKTLNVEEFVIKAQILAGGRGKGTFS 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++      V   + ++LG  L+TKQT   G  VN   + +  DI RE YL
Sbjct: 90  ---SGLRGGVKLTKDPAQVSELVEKMLGYKLVTKQTPKEGVLVNKARISEAMDIARETYL 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      +AS  GG+DIE+VA+  PQ IFK  I    G+T E   ++   L  +
Sbjct: 147 AILMDRSFNGPVIVASPAGGVDIEDVAEKTPQLIFKEPISIQEGITDEQAKTVAKNLNFK 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       +   +LY  F   D + +E+NP     +GR+   D+KI+FDDNA +R  DI 
Sbjct: 207 GPLLDQAAEQIKHLYNLFIKVDATQVEVNPFGETPDGRVVCFDAKINFDDNAAFRQRDIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              DVSE D RE+EA +++L+YI +DGNI C+VNGAGLAMATMDII+L+GG+PANFLDVG
Sbjct: 267 AQEDVSESDPREVEAARNHLNYIGMDGNIACLVNGAGLAMATMDIIQLHGGSPANFLDVG 326

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AFKI+T D  VK +L+NIFGGI+ C  +  GI SA + + + +PLV+RLE
Sbjct: 327 GSVQEDQVTQAFKILTEDPKVKAVLVNIFGGIVNCATIANGITSACRTINLKVPLVVRLE 386

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD    ++  SGL +  A DL+DAA+K V ++K
Sbjct: 387 GTNVDEARLILKNSGLAITPASDLEDAARKAVASLK 422


>gi|285808254|gb|ADC35787.1| succinyl-CoA synthetase (ADP-forming) beta subunit [uncultured
           bacterium 282]
          Length = 392

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 184/379 (48%), Positives = 250/379 (65%), Gaps = 13/379 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LRKY VPV  G ++ ++  A+ A K L      + VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRKYGVPVPGGEMVQTLEEADRAAKDLFDKGNAVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  SL    +  + ILG  L+T QTGP G +V  + +E+G+ I RE
Sbjct: 55  ----GGRGKGGGVKVVKSLADASTASKAILGMQLVTHQTGPQGQKVQRLLIEEGSAIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL +++DR +  + F+AS  GGM+IEEVA   P+KI+K  IDP +G+       L   L
Sbjct: 111 LYLGIVLDRAAARLVFMASQAGGMEIEEVAHATPEKIYKEYIDPAVGLQPYQARKLAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+     D       LYKAF + D +L+EINP I  K+ +L  LD KI+FDDNA++RH 
Sbjct: 171 GLKSTQVNDAVKFMTGLYKAFVETDSTLMEINPFITTKDDKLLALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD+SEED  E+EA +  L+YI LDG+I CMVNGAGLAMATMDII+  GG  ANFL
Sbjct: 231 DLKELRDLSEEDPLEVEASKFALNYIKLDGSIACMVNGAGLAMATMDIIEYAGGKAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q+++  AF I+ SD +VK I INIFGGI+R DVL   +++A K++ + +P+++
Sbjct: 291 DVGGGANQEQIENAFGILLSDPNVKAIFINIFGGILRVDVLATAVVAAAKKLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGL 376
           RLEG NV+ G +++AESGL
Sbjct: 351 RLEGTNVEEGRKILAESGL 369


>gi|32469357|gb|AAP83351.1| succinyl-CoA synthetase, beta subunit [Neocallimastix patriciarum]
          Length = 436

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 178/395 (45%), Positives = 246/395 (62%), Gaps = 7/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL +YNV   KG+V  +   A  A K L     V+K+Q+ AGGRGKG F 
Sbjct: 28  LSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKLNTEDLVIKAQVLAGGRGKGHF- 86

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++  + + V     ++LG  LITKQTG  G   N VYV +     RE 
Sbjct: 87  ----DSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYARREY 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR +     +AS++GG++IEEVAK  P  I  +      G+T E        + 
Sbjct: 143 YFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAIITVPFSIKTGLTKEIALDTAKKMG 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              +      D F  LYK F +KD +++EINP+     G +  +D+K  FDDNA Y+   
Sbjct: 203 FTEKCVPQAADTFLKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKQKG 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + NL+Y+ ++GNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 263 IFALRDTTQEDPREVAAAKWNLNYVGMEGNIGCLVNGAGLAMATMDIIKLNGGVPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A   +V  AFKII+SD +V  IL+NIFGGIMRCD++ +G++ AVKE+ ++IPLV+R
Sbjct: 323 VGGSATAKQVKEAFKIISSDKAVSAILVNIFGGIMRCDIVAEGVIQAVKELGLDIPLVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G  V+    LI  S L++    DLD AA+K+V 
Sbjct: 383 LQGTKVEEARELIRNSNLSLYAIDDLDKAAKKVVQ 417


>gi|307825853|ref|ZP_07656069.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
 gi|307733161|gb|EFO04022.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
          Length = 388

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 191/395 (48%), Positives = 256/395 (64%), Gaps = 16/395 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L   Y++PV  G   ++  +AE   K L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNIHEYQAKQLFLHYSIPVPDGKQATTPESAEQVAKELGGDGWVVKAQVHAGGRGKVGGV 60

Query: 61  EL---PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +L   PA+             V    R +LG  L+TKQTG  G  +N + +E    I RE
Sbjct: 61  KLAKTPAE-------------VAEFSRGMLGKRLVTKQTGAEGLPINSLLIEKTYPIKRE 107

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYLS+LVDR S  + FIAS+ GGMDIE VA + P++I  + + P  G+       +   L
Sbjct: 108 LYLSVLVDRGSERIIFIASSAGGMDIETVAHETPEQIISVPVHPAAGLQGYQCRKVAYAL 167

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+G      G +   LY  F  KD S +EINPLI   NG L  LD+KI+FDDNA+  H 
Sbjct: 168 GLKGSQIKALGKIMQGLYDLFLAKDASQIEINPLIETDNGELIALDAKINFDDNAVEVHP 227

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DI+ ++D  +ED +E +A+Q  L+YI L+GNIGCMVNGAGLAMATMD++KL GG PANFL
Sbjct: 228 DIRAMKDADQEDEKENKAQQFGLNYITLEGNIGCMVNGAGLAMATMDLVKLKGGQPANFL 287

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGG   +KV  AFK+I SD SVK +L+NIFGGI++CD++  GIL+AV++V + +P+V+
Sbjct: 288 DVGGGTSVEKVCEAFKLILSDHSVKAVLVNIFGGIVQCDIIAAGILAAVEQVHVAVPVVV 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RLEG N + G  L++ +GLN+  A DL  AA+++V
Sbjct: 348 RLEGTNAEQGRALLSNTGLNLYAADDLAHAAEQVV 382


>gi|313214028|emb|CBY40807.1| unnamed protein product [Oikopleura dioica]
 gi|313229191|emb|CBY23776.1| unnamed protein product [Oikopleura dioica]
          Length = 420

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 180/391 (46%), Positives = 247/391 (63%), Gaps = 12/391 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL +Y V   +G + +S   A    K LP P  VVK+Q+ AGGRG     
Sbjct: 15  LSIHEYMSFNLLNQYGVKTPEGHMATSPEQAFDIAKNLPTPDCVVKAQVLAGGRG----- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   +++GS LITKQTG  G     V+V +     RE Y 
Sbjct: 70  -----LNGGVKIVYSPEDAKALAEQMIGSDLITKQTGEQGRPCEKVFVVERRYPRREYYF 124

Query: 121 SLLVDR--TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           ++ ++R  T      + S  GGM+IEEVA   P+ I K  +D   G++ E    L   + 
Sbjct: 125 AITMERGATKFGPVLVGSASGGMNIEEVAATNPEAIIKEHVDIEAGLSMEQCKRLASKMG 184

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               ++ +  D F  +YK F +KD SLLEINPL     G +  +D+KI+FD+NA YR  D
Sbjct: 185 FPAYSQDEAADYFMKMYKLFKEKDCSLLEINPLAEDSTGEVLAMDAKINFDENAAYRQKD 244

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I ELRD  +ED RE+ A Q +L+YI LDGNIGC+VNGAGLAM+TMDII L+GG+PANFLD
Sbjct: 245 IFELRDWKQEDEREVIAAQSDLNYIGLDGNIGCLVNGAGLAMSTMDIISLHGGSPANFLD 304

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  D+V  AF++ITSDS V+ IL+NIFGGIMRCDV+ +GI++A KE+ + IP+V+R
Sbjct: 305 VGGGATADQVKEAFRLITSDSKVEAILVNIFGGIMRCDVIAQGIIAAAKELDLKIPIVVR 364

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           L+G  VD    LI +SGL +++   LD+AA+
Sbjct: 365 LQGTRVDDAKALIGQSGLKILSCDSLDEAAK 395


>gi|323136040|ref|ZP_08071123.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
 gi|322399131|gb|EFY01650.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
          Length = 390

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 174/382 (45%), Positives = 243/382 (63%), Gaps = 11/382 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK +L  + V +  G V  S   A  A   L G  +VVK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKEILASHGVAIPPGTVAFSPDQAVYAATELGGSHWVVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    R++LG  L+T QTGP G  V  VYVE      RE+YL
Sbjct: 58  -------GGVKLCRTYHEVQQAARDLLGKRLVTSQTGPEGKPVQRVYVEVADPFEREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS  GGMDIEE+A+  P ++ +++++P +G+       L   L L 
Sbjct: 111 GYVLDRKLERVRVIASKHGGMDIEEIARTAPDELLQVIVEPAVGLQQFQARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D ++LEINPL+I K+ ++  LD+K+SFDDNAL+R  +I 
Sbjct: 171 LKQVSRAVQTIMGAYRAFRDNDATMLEINPLVITKDDKVLALDAKMSFDDNALFRRRNIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +H+L+YI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMNDPSQSDPREAQAAEHSLNYIGLDGEIGCIVNGAGLAMATMDMIKHAGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-IPLVMRL 359
           GGA  ++VA AF+++ SD  VK +L+NIF GI RCD + +G++ AV+  K+  +PLV+RL
Sbjct: 291 GGASPERVATAFRLVLSDRRVKVVLVNIFAGINRCDWVAQGVVDAVRAEKLEGVPLVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITA 381
            G NV+ G ++I+ESG+ +I A
Sbjct: 351 AGTNVEAGKKIISESGIPIIQA 372


>gi|330839371|ref|YP_004413951.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Selenomonas
           sputigena ATCC 35185]
 gi|329747135|gb|AEC00492.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Selenomonas
           sputigena ATCC 35185]
          Length = 396

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/401 (43%), Positives = 250/401 (62%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   SV  A    K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREFGVNVPNGLPAFSVEEAVENAKKLGAAVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V    +E+LG  L+T QTGP G +V  + +E+G++I +E YL
Sbjct: 58  -------GGVKIAKSVEEVEGYAKELLGKVLVTHQTGPEGKKVGRLLIEEGSNIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR +  +  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 111 SFVVDRATARIVMMGSEEGGVEIEKVAAETPEKIIKEYIDPVIGLAPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   LY AF  KD S +EINPL++     +  LD+K++FDD+AL+RH DI 
Sbjct: 171 APAIRKAAALMEKLYNAFIGKDCSQVEINPLVVTAEDDVICLDAKLNFDDSALFRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E EA    L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 231 ELRDETEEDPKEREAAAAGLNYVNLGGDVACMVNGAGLAMATVDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G ++ +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSEPEKIAKAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKIISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 351 VVRLEGTKVEEGREILKNTPISNVFPAPTMEGGAEQIVKLV 391


>gi|260886822|ref|ZP_05898085.1| succinyl-CoA ligase [ADP-forming] subunit beta [Selenomonas
           sputigena ATCC 35185]
 gi|260863421|gb|EEX77921.1| succinyl-CoA ligase [ADP-forming] subunit beta [Selenomonas
           sputigena ATCC 35185]
          Length = 398

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/401 (43%), Positives = 250/401 (62%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   SV  A    K L   + VVK+QIHAGGRGK    
Sbjct: 3   MNIHEYQSKQVLREFGVNVPNGLPAFSVEEAVENAKKLGAAVTVVKAQIHAGGRGKA--- 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V    +E+LG  L+T QTGP G +V  + +E+G++I +E YL
Sbjct: 60  -------GGVKIAKSVEEVEGYAKELLGKVLVTHQTGPEGKKVGRLLIEEGSNIKKEYYL 112

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR +  +  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 113 SFVVDRATARIVMMGSEEGGVEIEKVAAETPEKIIKEYIDPVIGLAPFQATRMAYAINIP 172

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   LY AF  KD S +EINPL++     +  LD+K++FDD+AL+RH DI 
Sbjct: 173 APAIRKAAALMEKLYNAFIGKDCSQVEINPLVVTAEDDVICLDAKLNFDDSALFRHPDIV 232

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E EA    L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 233 ELRDETEEDPKEREAAAAGLNYVNLGGDVACMVNGAGLAMATVDIIKHYGGEPANFLDVG 292

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G ++ +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 293 GDSEPEKIAKAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKIISKDGKSLPVPV 352

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 353 VVRLEGTKVEEGREILKNTPISNVFPAPTMEGGAEQIVKLV 393


>gi|323143443|ref|ZP_08078126.1| succinate-CoA ligase, beta subunit [Succinatimonas hippei YIT
           12066]
 gi|322416728|gb|EFY07379.1| succinate-CoA ligase, beta subunit [Succinatimonas hippei YIT
           12066]
          Length = 392

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/390 (45%), Positives = 249/390 (63%), Gaps = 12/390 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHA-AESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+HEYQ+K LLR Y +PV +  V S      ++A +  PGP +V K Q+H+G RGK   
Sbjct: 1   MNLHEYQSKELLRSYGLPVPEFKVSSKTTGIGKAAYELSPGP-FVCKCQVHSGARGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV V ++     +   + LG+ L+T+Q+GP G  V+ + +E   + +RELY
Sbjct: 58  --------GGVVVVNTPAEAEAFAAKWLGNRLVTRQSGPHGKPVSKILIERATEAVRELY 109

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +   +DRT+  +  +AS  GGM +EE+A  +P++I K+ ID L G       +L   L L
Sbjct: 110 IGATIDRTNAHLTIMASESGGMSVEEIAATHPERILKVPIDELTGPLPYQGRALAYKLGL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   +   +F  + K F DKD+SL+E+NPL + K G L  LD+KI+ D  ALYRH + 
Sbjct: 170 KGKQVNEFTKIFVGIAKLFIDKDLSLVEVNPLAVTKEGSLLCLDAKINVDSYALYRHPEF 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E+ D S+ED R  +A     SY+ L+GNIGC+VNGAGLAM TMDIIK  GG+PANFLDV
Sbjct: 230 LEMDDPSQEDPRIAKAVASGFSYVPLEGNIGCLVNGAGLAMGTMDIIKSSGGSPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +D+V  AFKII  D +VK IL+NIFGGI+RCD++ +GI  A+ EV  ++P+V+RL
Sbjct: 290 GGTATRDRVMEAFKIILEDPAVKCILVNIFGGIVRCDLIAEGIRGAITEVGTDVPVVVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           EG +   G +++ ESGLN+  A DL  AA+
Sbjct: 350 EGNHAQDGAKILKESGLNIHPAYDLRQAAE 379


>gi|330944046|ref|XP_003306299.1| hypothetical protein PTT_19429 [Pyrenophora teres f. teres 0-1]
 gi|311316234|gb|EFQ85615.1| hypothetical protein PTT_19429 [Pyrenophora teres f. teres 0-1]
          Length = 443

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHEY++ ALL  Y + V KG V  S   AE   K + G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LAIHEYRSAALLESYGIGVPKGGVAESGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++G  LITKQTG  G   N V++ D     RE YL
Sbjct: 93  N---GFKGGVRVVYSPREASILAEQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK++P+ I    +D   GVT E   ++   L   
Sbjct: 150 AILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPVDIHTGVTDEMARNIATDLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 210 EQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDLTQEDPEEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGTPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  AF +ITSD  V  I +NIFGGI+RCD + KG++  V+E+ +  P++ RL+
Sbjct: 330 GGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +L+ +SGL + +  DL  AA+K V   K
Sbjct: 390 GTNMEAAQKLLNDSGLKIFSIDDLQAAAEKSVQFSK 425


>gi|170084845|ref|XP_001873646.1| succinyl-coa synthetase beta chain, SSC-beta [Laccaria bicolor
           S238N-H82]
 gi|164651198|gb|EDR15438.1| succinyl-coa synthetase beta chain, SSC-beta [Laccaria bicolor
           S238N-H82]
          Length = 416

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 247/394 (62%), Gaps = 4/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K V  +S   A +A         V+K+Q+ AGGRGKG+F 
Sbjct: 23  LSIHEYQSMKLLNLYGIPTPKSVAATSPQEAYAAASNFGKDKLVIKAQVLAGGRGKGKFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV +  S +       +++GS LITKQTG  G   N + + +      E Y+
Sbjct: 83  N---GFQGGVHMVDSPEQAKEIASKMIGSKLITKQTGEHGRICNAIMLAERRQPAHEYYV 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +  V  +AS QGGM+IEEVA   P  I    ID   G++ ++  S+   L  Q
Sbjct: 140 AVLNDRATQGVVLVASAQGGMNIEEVAAKNPSAIITTPIDFEKGLSKDEAISVAKKLGFQ 199

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             + + +  D+F NLY+ F +KD + +EINP+ +  +G +  +D+K  FDDNA +R  DI
Sbjct: 200 TDKTQSEAADIFINLYRIFKEKDATQIEINPMALTTDGEVLCMDAKFGFDDNAEFRQKDI 259

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD+S+E+  E+EA++ NLS+I LDG+IGC+VNGAGLAMATMD++ L+GG PANFLDV
Sbjct: 260 FALRDISQEEPSEVEAQKANLSFIKLDGSIGCLVNGAGLAMATMDVLSLHGGNPANFLDV 319

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V  AF+I+  D  VK I INIFGGIMRCD + +G++ A KE+ + IPL++RL
Sbjct: 320 GGGATPETVKKAFEILLQDPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLTIPLIVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +G       ++I ESGL ++    LDDAA+K V 
Sbjct: 380 KGTKEAEAKQMIRESGLKIVAFDSLDDAAEKAVQ 413


>gi|189205030|ref|XP_001938850.1| succinyl-CoA ligase beta-chain [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985949|gb|EDU51437.1| succinyl-CoA ligase beta-chain [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 443

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHEY++ ALL  Y + V KG V  S   AE   K + G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LAIHEYRSAALLESYGIGVPKGGVAESGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++G  LITKQTG  G   N V++ D     RE YL
Sbjct: 93  N---GFKGGVRVVYSPREASILAEQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK++P+ I    +D   GVT E   ++   L   
Sbjct: 150 AILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPVDIHTGVTDEMARNIATDLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 210 EQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDLTQEDPEEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGTPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  AF +ITSD  V  I +NIFGGI+RCD + KG++  V+E+ +  P++ RL+
Sbjct: 330 GGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +L+ +SGL + +  DL  AA+K V   K
Sbjct: 390 GTNMEAAQKLLNDSGLKIFSIDDLQAAAEKSVQFSK 425


>gi|320586114|gb|EFW98793.1| succinyl-synthetase beta [Grosmannia clavigera kw1407]
          Length = 445

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 246/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+Q+  L+RKY + +  G V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 35  LSIHEHQSADLMRKYGIQIPDGAVARTGAEAEEVAKNISNGDLVIKAQVLAGGRGKGTFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 95  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAGGRLCNAVYICERKFARREFYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P+ I    ID   GVT E    +   L   
Sbjct: 152 AILMDRATQKPVIVSSSQGGMDIEAVAKENPEAINSTYIDIETGVTDEIARDIAVKLGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   DG D    LY+ F +KD + +EINPL    + ++  +D+K +FDDNA YR  ++ 
Sbjct: 212 EQCVEDGKDTIQKLYQIFKEKDATQIEINPLSETSDHKVMCMDAKFNFDDNAAYRQEEVF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED+ E+ A + NL++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 272 SWRDTSQEDAEEVRAAKSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITS+ +V  + +NIFGGI+RCD +  G+++ V+ + + IP++ RL+
Sbjct: 332 GGATPAAIKEAFELITSEQNVTAVFVNIFGGIVRCDAIAHGLINTVETLNLRIPIITRLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+  +++I ESGL + +  DL  AA+K V   K
Sbjct: 392 GTNVEQAHQIINESGLKIFSIDDLQSAAEKAVQLSK 427


>gi|121714307|ref|XP_001274764.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402918|gb|EAW13338.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           clavatus NRRL 1]
          Length = 453

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 43  LSIHEYLSARLLKSYGVGVPKGEVARSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 102

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 103 N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 159

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P+ I    I+  +GVT +    +   L   
Sbjct: 160 AILMDRATQSPVIVSSSQGGMDIEAVAKENPEAIITTPININVGVTDDIARKIATDLGFS 219

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLY+ F +KD + +EINPL    + ++  +D+K+ FDDNA +R  D+ 
Sbjct: 220 EQCIEDAKTTIQNLYRVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKDVF 279

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 280 SWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 339

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  + +NIFGGI+RCD + +G+++ V E+ + IP+V RL+
Sbjct: 340 GGATPAAIKSAFELITSDPKVTAVFVNIFGGIVRCDAIAQGLINVVHEMDLRIPIVARLQ 399

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +LI ESGL + +  DL  AA+K V   K
Sbjct: 400 GTNMEQAQKLINESGLKIFSIEDLQSAAEKSVQFSK 435


>gi|227823162|ref|YP_002827134.1| malate--CoA ligase subunit beta [Sinorhizobium fredii NGR234]
 gi|227342163|gb|ACP26381.1| malate-CoA ligase, beta subunit [Sinorhizobium fredii NGR234]
          Length = 394

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 169/381 (44%), Positives = 246/381 (64%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL +Y + + +G +  S   A    + + G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLSRYQIHIPRGGLAYSPEQAAYRAREIGGDRWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ S+   ++     +LG T++T QTGP G  V+ +YVE+  DI RE+Y+
Sbjct: 58  -------GGIKLCSTDHEIVEAADSMLGRTIVTHQTGPQGKLVSRLYVEEAMDIAREIYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS+ GGM+IEE+A+  P  I +  +DP +G+       +   L + 
Sbjct: 111 GFVLDRKSERIMIVASSSGGMEIEEIAEAEPDSIIRATVDPGVGMQDFQAREIAFGLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D S+LEINPL++ + G L  LD+K+SFD+NAL+R   I 
Sbjct: 171 NALIGRATQTLLGCYRAFVDYDASMLEINPLVVTRRGDLVALDAKMSFDENALFRRPHIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A    LSY+ LDGNIGC++NGAGLAMATMD+IK+ GG PANFLD+G
Sbjct: 231 EMRDKSQEDQRETYASDRGLSYVGLDGNIGCIINGAGLAMATMDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA +F+ + +D  V+ IL+NIF GI RCD + +G++ A++EV + +PLV+RL 
Sbjct: 291 GGASPDRVAKSFRAVLTDRQVETILVNIFAGINRCDWVAEGVIKALREVGVPVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G N++ G R++AESG N+I A
Sbjct: 351 GTNMEEGRRILAESGENIIVA 371


>gi|212535888|ref|XP_002148100.1| succinyl-CoA synthetase beta subunit, putative [Penicillium
           marneffei ATCC 18224]
 gi|210070499|gb|EEA24589.1| succinyl-CoA synthetase beta subunit, putative [Penicillium
           marneffei ATCC 18224]
          Length = 444

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE+  K++ G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSAELLKSYGVGVPKGHVARTADEAEAVAKSIGGDDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAAGRLCNAVYIVERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P  I    ID  IGVT E   S+   L   
Sbjct: 151 AILMDRQTQSPVIVSSSQGGMDIETVAKETPDAIRTTPIDITIGVTDEIARSIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  +   NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 211 AQCIEDAKNTIQNLYKVFIEKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P++ RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMGLRTPVIARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   +L+ ES L +    DL  AA+K V   K
Sbjct: 391 GTNMEQARKLLDESNLKIFCIEDLQSAAEKSVQFSK 426


>gi|307721036|ref|YP_003892176.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979129|gb|ADN09164.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfurimonas
           autotrophica DSM 16294]
          Length = 391

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 186/389 (47%), Positives = 244/389 (62%), Gaps = 18/389 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  +Y VP  +G+V ++   A  A   L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKQIFAQYGVPTPRGMVANTPDEAVKAAHELGGNIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V     EILG TL+T QTGP G  V  VY+E+GADI  ELYL
Sbjct: 52  -GGRGLGGGVKLAKSIEEVKELAGEILGMTLVTHQTGPEGKLVQKVYIEEGADIKDELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDM 176
           S+++DR   M   +AST+GGMDIE VA+  P+KI K+ IDP IG       E V  L   
Sbjct: 111 SVVLDRAQEMPIIMASTEGGMDIETVAEKTPEKIIKVTIDPSIGFQGFHGRELVFGLGIT 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            + + +  ID       LYK + DKD  ++EINPLI    G    LD K+ FDD+AL RH
Sbjct: 171 DKNEQRKMID---FASKLYKVYMDKDAEMIEINPLIKTGAGDFIALDGKMGFDDSALGRH 227

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +++++RD+SEED  E EA Q+ LSYIALDG IGCMVNGAGLAM TMD I   GG PANF
Sbjct: 228 PELEDMRDISEEDPDEREASQYGLSYIALDGEIGCMVNGAGLAMGTMDTINYMGGTPANF 287

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A+ + VA  F+II  + +VK I +NIFGGI+RCD +  GIL A K V +++P++
Sbjct: 288 LDVGGSANAETVAKGFEIILKNPNVKAIFVNIFGGIVRCDRIANGILEATKLVDVHVPVI 347

Query: 357 MRLEGANVDIGNRLIAESGL-NVITAIDL 384
           +RL+G N      ++  + + NVI A DL
Sbjct: 348 VRLDGTNAPEAAEILKNANIANVIAATDL 376


>gi|15606731|ref|NP_214111.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
 gi|6647847|sp|O67546|SUCC_AQUAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|2983961|gb|AAC07508.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
          Length = 385

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 177/393 (45%), Positives = 248/393 (63%), Gaps = 14/393 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  KY +PV +G V  S+  A+   + L     VVK+QIH GGRGK    
Sbjct: 1   MKLHEHQAKEIFAKYGIPVPEGKVAFSLKEAKEVAEELGEFPLVVKAQIHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   +  +   +  +LG  L T Q  P G  VN V +E   +I +E YL
Sbjct: 58  -------GGVKIVKDMDELEKAVESLLGKVLKTFQC-PDGKPVNRVLIEKATNIDKEYYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+      +AS  GGM+IEE+ K+ P+ I    IDP +G+       L   L L 
Sbjct: 110 AITLDRSKSKPVIMASAAGGMEIEEIVKENPEAIIIETIDPELGLMPYQARELAFKLNLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +   LY+ + D D SL+EINPL++ K G L  LD+K+  DDNAL+RH D++
Sbjct: 170 VK---EFASIALKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDIDDNALFRHKDLE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++    E+EAK++ L+YI L+GNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 227 EMEDETQLPQLEVEAKKYGLNYIKLNGNIGCMVNGAGLAMATMDIIKLAGGEPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A AF+I+ +D  VK + INIFGGI+R D L +G++ A K V++ +P+V RLE
Sbjct: 287 GGANVEQIANAFRILMADPDVKAVFINIFGGILRVDRLAQGLIEASKMVELRVPIVARLE 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+ G R++ ESGLN I A D+ D A+K V 
Sbjct: 347 GTNVEEGKRMLQESGLNFIIAEDMWDGAKKAVE 379


>gi|126642749|ref|YP_001085733.1| succinyl-CoA synthetase beta chain [Acinetobacter baumannii ATCC
           17978]
          Length = 344

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 175/353 (49%), Positives = 249/353 (70%), Gaps = 11/353 (3%)

Query: 45  VKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
           +K+Q+HAGGRGK           GGV+V  S + VI     I+G+ L+T QT   G  VN
Sbjct: 1   MKAQVHAGGRGKA----------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVN 50

Query: 105 CVYV-EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
            + V ED   + RELYL  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+
Sbjct: 51  SIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLV 110

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+       +   L L+ +       +    Y+AF + D +L EINPL + +NG +  +D
Sbjct: 111 GLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVD 170

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +K+  D NALYR   +  LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATM
Sbjct: 171 AKVGIDSNALYRLPKVAALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATM 230

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DIIKLYGG PANFLDVGGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I+
Sbjct: 231 DIIKLYGGQPANFLDVGGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAII 290

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +AV+EV + +P+V+RLEG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 291 AAVQEVNVTVPVVVRLEGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 343


>gi|308482588|ref|XP_003103497.1| hypothetical protein CRE_28686 [Caenorhabditis remanei]
 gi|308259918|gb|EFP03871.1| hypothetical protein CRE_28686 [Caenorhabditis remanei]
          Length = 415

 Score =  332 bits (850), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 176/395 (44%), Positives = 247/395 (62%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V K VV S+   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQKFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +     + +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  N-GTKGIGGVYITKEKTAALEAIDEMIGKRLVTKQTTEEGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P +IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQMGMTDGQALKIAKDLQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  +I 
Sbjct: 199 GNLLGAAATEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G+++AV ++ + +P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    ++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKLIMKKSGLTILTANNLDEAAAKAVSSL 413


>gi|291231475|ref|XP_002735690.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit-like
           [Saccoglossus kowalevskii]
          Length = 430

 Score =  332 bits (850), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 256/396 (64%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE+ +  +LR  +V + KG V +S   A    K L     V+K+Q+ AGGRGKG F 
Sbjct: 19  LSVHEHYSMKILRDNDVTIPKGYVANSAEDALRVSKKLGAEDLVIKAQVLAGGRGKGTFD 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  + + + S   +++G+ LITKQTG  G   N VY+ +     RE Y 
Sbjct: 79  N---GFKGGVKIAFTPEEIQSFASKMIGNKLITKQTGKNGRICNEVYICERLYSRRETYF 135

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DRT      IAS+QGG++IEEVA+D+P+ I    ID   G++ ED   + + +   
Sbjct: 136 AITMDRTHSGPVIIASSQGGVNIEEVARDHPEAIVTHPIDVTQGLSKEDALMIAEKVGFS 195

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +++    D F  LY  F  +D +++EINP+     G++  +D+K +FDDNA +R  ++ 
Sbjct: 196 TKSQEHAADSFMKLYDVFISRDATMIEINPMTEDSQGKVYCMDAKFNFDDNAAFRQKEVF 255

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED RE+EA + NL+YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 256 SFRDWSQEDEREVEASKFNLNYIQLDGDIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 315

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AF +ITSD  V  I++NIFGGIMRCD++ +GI++A +E+ +N+PLV+RL+
Sbjct: 316 GGATAEQVKEAFHLITSDPKVAAIMVNIFGGIMRCDIIAQGIIAAAEELNLNVPLVIRLQ 375

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  VD    LIA S L ++   +LD+AA+  V   K
Sbjct: 376 GTQVDDARALIASSKLRILACSELDEAAKMAVRLSK 411


>gi|308482626|ref|XP_003103516.1| hypothetical protein CRE_28780 [Caenorhabditis remanei]
 gi|308259937|gb|EFP03890.1| hypothetical protein CRE_28780 [Caenorhabditis remanei]
          Length = 415

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 176/395 (44%), Positives = 247/395 (62%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V K VV S+   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQKFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +     + +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  N-GTKGIGGVYITKEKNAALEAIDEMIGKRLVTKQTTEEGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P +IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQMGMTDGQALKIAKDLQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  +I 
Sbjct: 199 GNLLGAAATEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G+++AV ++ + +P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    ++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKLIMKKSGLTILTANNLDEAAAKAVSSL 413


>gi|321453347|gb|EFX64591.1| hypothetical protein DAPPUDRAFT_304522 [Daphnia pulex]
          Length = 450

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 179/389 (46%), Positives = 247/389 (63%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEY +  LL++  + V K  V  S   A+  ++ L     VVK+Q+  GGRGKG FK
Sbjct: 41  LNVHEYVSYTLLQQEGITVPKFGVARSREEAQKIVEELDCLDVVVKAQVLTGGRGKGHFK 100

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV+   S +       +++G  LITKQTG  G   N V + +     RE Y 
Sbjct: 101 ---GGLKGGVKTVFSAEEAGDIASKMIGDLLITKQTGEKGRICNSVMITERKYQRREYYF 157

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAST GGM+IEEVA + P+ I    +D + G+T E    + D L L 
Sbjct: 158 TIMLERAYGGPVLIASTHGGMNIEEVAHENPEAIITEPVDIIKGLTKEQALLVADKLGLT 217

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R +  D+F  LY  F   D +++EINPL   ++G+L  LD+K+ FDDNA +R   + 
Sbjct: 218 SK-REEAADMFIKLYNLFIKYDATMIEINPLAEDQDGKLMCLDAKMRFDDNADFRQSTVF 276

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++E+S+E+EA + NL+YIALDG+I C+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 277 SYRDWTQENSQEVEAAKFNLNYIALDGDIACLVNGAGLAMATMDIIKLHGGEPANFLDVG 336

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI+ A  E+ I  P++ RL+
Sbjct: 337 GGATSAQVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIIAANELNIKTPIICRLQ 396

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA SGL ++   +LD+AA+
Sbjct: 397 GTNVDEAKVLIANSGLKILPCDNLDEAAR 425


>gi|149191114|ref|ZP_01869373.1| succinyl-CoA synthetase subunit beta [Vibrio shilonii AK1]
 gi|148835042|gb|EDL52020.1| succinyl-CoA synthetase subunit beta [Vibrio shilonii AK1]
          Length = 388

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 183/384 (47%), Positives = 246/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGNMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G++ +AESGLN+I A  L
Sbjct: 351 GNNAPLGSKKLAESGLNIIAANSL 374


>gi|78777248|ref|YP_393563.1| succinyl-CoA synthetase, beta subunit [Sulfurimonas denitrificans
           DSM 1251]
 gi|123550305|sp|Q30RQ3|SUCC_SULDN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78497788|gb|ABB44328.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfurimonas
           denitrificans DSM 1251]
          Length = 391

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 182/397 (45%), Positives = 247/397 (62%), Gaps = 34/397 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  KY VP  KG++  SV  A +  +TL G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKQIFAKYGVPTPKGLMAESVKQAVANAETLGGSIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+ V    +EILG TL+T QTGP G  V  +Y+E+GADI  ELYL
Sbjct: 52  -GGRGLGGGVKLARSLEEVEQLSKEILGMTLVTHQTGPEGKLVQKLYIEEGADIKEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AST+GGM IE+VA + P+KI K+ +DP IG                
Sbjct: 111 GVVLDRAREMPVIMASTEGGMAIEDVAHNTPEKIIKIAVDPAIGFQG-----------FH 159

Query: 181 GQARIDG-GDLFPN-----------LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
           G+  + G G   PN           LYK + + D  ++EINPL+   +G    LD K+ F
Sbjct: 160 GRELVFGLGITDPNEQKKLISFASKLYKLYMENDAEMIEINPLVKTGSGEFLALDGKMGF 219

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           DD+AL RH DI+++RD+SEED+ E EA ++ LSY++LDG IGCMVNGAGLAM TMD I  
Sbjct: 220 DDSALGRHPDIEDMRDISEEDADEREAGKYGLSYVSLDGEIGCMVNGAGLAMGTMDTINY 279

Query: 289 YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
            GG PANFLDVGG A+ + VA  F+II  +  VK I +NIFGGI+RCD +  GIL A K 
Sbjct: 280 MGGTPANFLDVGGKANAETVAKGFEIILKNPKVKAIFVNIFGGIVRCDRIANGILEATKL 339

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGL-NVITAIDL 384
           V +++P+++RL+G N +    ++ ++ + NVI A DL
Sbjct: 340 VDVHVPVIVRLDGTNAEEAAAILRDANIANVIAATDL 376


>gi|90411601|ref|ZP_01219611.1| succinyl-CoA synthetase subunit beta [Photobacterium profundum
           3TCK]
 gi|90327491|gb|EAS43844.1| succinyl-CoA synthetase subunit beta [Photobacterium profundum
           3TCK]
          Length = 388

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 179/384 (46%), Positives = 245/384 (63%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGFACDTAQEAFEAAGRISTDKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVEIHDTKDGVKEFAQKWLGKNLVTFQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQPYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G++ +AESGLN+I A  L
Sbjct: 351 GNNAPLGSKKLAESGLNIIAATSL 374


>gi|320581180|gb|EFW95401.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Pichia
           angusta DL-1]
          Length = 425

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 170/393 (43%), Positives = 247/393 (62%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR Y VPV KG   ++   A    K+L     V+K+Q   GGRGKG F 
Sbjct: 33  LSIHEYRSAQLLRSYGVPVPKGDAATTPEGAYEIAKSLGTKELVIKAQALTGGRGKGHFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GVR+  + +       +++G  LITKQTG  G  V  VYV +     RE YL
Sbjct: 93  N---GLKSGVRLIETPEEAKDLASKMIGHKLITKQTGAAGKEVTAVYVVERKYAKREAYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     +AS++GG+DIE VAK+ P  I K  +D   G++ E    +   L+  
Sbjct: 150 SIIMDRKNQSTLVVASSEGGVDIEGVAKENPDAIKKYPVDYNQGISDELAKQIASGLKFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A     +    LY+ F DKD + +EINPL    +  +  +D+K  FDDNA +R  ++ 
Sbjct: 210 PEAVPKAAETIKKLYQIFKDKDATQIEINPLTETVDHEVMCMDAKFGFDDNAAFRQEEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED  E+ A +  L++I LDGNIGC+VNGAGLAMATMD+++LYGG+PANFLDVG
Sbjct: 270 SWRDLTQEDPDEVHASKFGLNFIKLDGNIGCLVNGAGLAMATMDVVQLYGGSPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AFK+I S+  VK I +NIFGGI+RCD + +G+++A K + + IP+V+RL+
Sbjct: 330 GTATPETIEEAFKLIISEKGVKAIFVNIFGGIVRCDYVAEGLIAATKNLSLTIPVVVRLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N+DI  +LI+ESGL +    DLD+AA+K+V 
Sbjct: 390 GTNLDIAKKLISESGLKLYLFEDLDEAAEKVVE 422


>gi|54308243|ref|YP_129263.1| succinyl-CoA synthetase subunit beta [Photobacterium profundum SS9]
 gi|81400057|sp|Q6LTB5|SUCC_PHOPR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|46912671|emb|CAG19461.1| putative succinyl-CoA synthase, beta subunit [Photobacterium
           profundum SS9]
          Length = 388

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 179/384 (46%), Positives = 245/384 (63%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGFACDTAQEAFEAAGRISTDKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVEIHDTKDGVKEFAQKWLGKNLVTFQTDAKGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQPYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G++ +AESGLN+I A  L
Sbjct: 351 GNNAPLGSKKLAESGLNIIAATSL 374


>gi|169609801|ref|XP_001798319.1| hypothetical protein SNOG_07991 [Phaeosphaeria nodorum SN15]
 gi|111063147|gb|EAT84267.1| hypothetical protein SNOG_07991 [Phaeosphaeria nodorum SN15]
          Length = 441

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 251/396 (63%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++ ALL  Y + V KG V ++   AE   K++ G   V+K+Q+ AGGRGKG F 
Sbjct: 31  LSIHEYRSAALLESYGIGVPKGGVATNAAEAEQVAKSIGGDDAVIKAQVLAGGRGKGTFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++G  LITKQTG  G   N V++ +     RE YL
Sbjct: 91  N---GFKGGVRVVYSPREAAILADQMIGHKLITKQTGAAGRLCNAVFIVERKFARREFYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    I+  +GVT E   ++   L   
Sbjct: 148 AILMDRGSQGPVIVASSQGGMDIETVAKENPEAIITTPINIHVGVTDEIARTIATELGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 208 EQCIEDAKDTIQKLYKVFMERDATQIEINPLSETTDHQVLAMDAKLGFDDNADFRQKEVF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 268 EWRDFTQEDPDEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  AF +ITSD  V  I +NIFGGI+RCD + +G++  V+++ +  P++ RL+
Sbjct: 328 GGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAQGLIQVVQQMNLKTPVIARLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++L+ +SGL + +  DL  AA+K V   K
Sbjct: 388 GTNMEAAHKLLNDSGLKIFSIDDLQAAAEKSVQFSK 423


>gi|159045032|ref|YP_001533826.1| malate--CoA ligase subunit beta [Dinoroseobacter shibae DFL 12]
 gi|157912792|gb|ABV94225.1| succinyl-CoA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 392

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 168/381 (44%), Positives = 246/381 (64%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHE+QAK +L ++ VPV KG V  S   A    + L G   VVK+Q+H+GGRG+    
Sbjct: 1   MDIHEHQAKDILARFGVPVPKGGVAFSPEQAAFRCRELGGGRCVVKAQVHSGGRGEA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++      V      +LG++L+TKQT   G R++ ++VE+ + I RELYL
Sbjct: 58  -------GGVKLCEGEAEVRDFAASLLGTSLVTKQTDAAGKRIDRLWVEEASAIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS  GGM+IE++A++ P+ + ++++DP +G+       L   L LQ
Sbjct: 111 GFVLDRKSERIMIVASGHGGMEIEDLAEEDPESLIRMVLDPAVGLAEYQARELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +    Y+A+ D D  ++EINPL++ K+  L  LD+K+SFD NAL+R  +I 
Sbjct: 171 GAQIGQMVTVLKACYRAYRDLDAMMVEINPLVVCKDSSLVALDAKMSFDTNALFRRAEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  +ED RE  A  H L+Y+ LDG+IGC++NGAGLAMA+MD+I+L GG PANFLD+G
Sbjct: 231 ALRDPGQEDPRESFAADHGLAYVGLDGDIGCIINGAGLAMASMDMIQLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AF+ + SD +V  IL+NIF GI RCD +  G++ A  E+ I +P+V+RL 
Sbjct: 291 GGASPERVCQAFRTVLSDQNVSVILVNIFAGINRCDWIANGVIKAYTELGIELPVVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G NV+ G +LIAESGL +I+A
Sbjct: 351 GTNVEAGRKLIAESGLPIISA 371


>gi|145476559|ref|XP_001424302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391366|emb|CAK56904.1| unnamed protein product [Paramecium tetraurelia]
          Length = 449

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/409 (45%), Positives = 257/409 (62%), Gaps = 17/409 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRF 59
            ++HEYQ+K L+R +NV V KG +  +   A    KTL P    ++KSQ+HAGGRGKG  
Sbjct: 43  FDLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGKG-- 100

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LY
Sbjct: 101 -TLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLY 159

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+ ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+L
Sbjct: 160 LAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDINTGLTDQIANKVVDTLQL 219

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           Q   R    +   NLYK F   D + +EINP       +L  +D+KI+ DDNA +R   +
Sbjct: 220 QS-VRQQAVEQLRNLYKMFISLDATQVEINPWATDPKNQLFCIDAKINVDDNAKFRQKQL 278

Query: 240 QELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            +LR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PAN
Sbjct: 279 VDLRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGEPAN 338

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PL
Sbjct: 339 FLDVGGGANVEQVKTAFEILNSHPRVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPL 398

Query: 356 VMRLEGANVDIGNRLI-----AESGLNVITAIDLDDAAQ---KIVHAVK 396
           V+RL G N   G +++     +++ +++ TA DLDDAAQ   KI H  K
Sbjct: 399 VVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIAHTSK 447


>gi|302899060|ref|XP_003047970.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728902|gb|EEU42257.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 447

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 244/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y V V KG V  +   A+   + +     V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGVGVPKGAVAKTAKEAKQVAEQIGTEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S        ++++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPHEAEMFAQQMIGYNLITKQTGAGGRLCNSVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P  I    ID  +GVT E    +   L   
Sbjct: 154 AILMDRQNQCPVIVSSSQGGMDIETVAKENPSAINTNYIDINVGVTDEIAREIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LY+ F +KD + +EINPL    + ++  +D+K  FDDNA +R  D+ 
Sbjct: 214 EQCIEEAKDTIQKLYQIFNEKDSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQKDVF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+ED  E+ A + NL++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 EWRDTSQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD+ V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 334 GGATPAAIKEAFELITSDAKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD  ++LI +SGL + +  DL  AA+K V   K
Sbjct: 394 GTNVDAAHQLINDSGLKIFSIDDLQSAAEKAVQLSK 429


>gi|258577823|ref|XP_002543093.1| succinyl-CoA ligase beta-chain [Uncinocarpus reesii 1704]
 gi|237903359|gb|EEP77760.1| succinyl-CoA ligase beta-chain [Uncinocarpus reesii 1704]
          Length = 443

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + V KG V  +   AE+  K L G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGVPKGEVARTADEAEAVAKKLGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRILYSPTEARMFAGQMIGHKLITKQTGARGRLCNAVYICERKYARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVSSSQGGMDIEAVAKESPDAITTTKIDINVGVTDEIARKIATGLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LY+ F ++D + +EINPL    + R+  +D+K+ FDDNA +R  D+ 
Sbjct: 210 EQCIEEAKDTIQKLYQVFMERDATQIEINPLAETTDYRVLAMDAKLGFDDNAEFRQKDVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDPDEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P+V RL+
Sbjct: 330 GGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL +AA+K V   K
Sbjct: 390 GTNMEKAHQLINDSGLKIFSIEDLQNAAEKSVQFSK 425


>gi|299755136|ref|XP_001828454.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130]
 gi|298411086|gb|EAU93446.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130]
          Length = 416

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 247/394 (62%), Gaps = 4/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K V   +   A    K       V+K+Q+ AGGRGKG F 
Sbjct: 23  LSIHEYQSMKLLNSYGIPTPKSVAAHTPEEAYQVAKNFGTDKLVIKAQVLAGGRGKGHFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV +  S +       +++GS LITKQTG  G   N V + +      E Y+
Sbjct: 83  ---TGLQGGVHMVDSAEQAKDFASKMIGSKLITKQTGAGGRICNAVMLAERRQPEHEYYV 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DRT+  V  +AS QGGM+IEEVA   P  I    ID   G++  +  ++   L  +
Sbjct: 140 AVLNDRTTQGVVLVASAQGGMNIEEVAAKDPSAIITTPIDFEKGLSKPEAIAIAQKLGFK 199

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             Q + +  D+F NLY+ F +KD + +EINP+ + K+G +  +D+K  FDDNA +R  ++
Sbjct: 200 DEQTQSEAADIFINLYRIFKEKDATQIEINPMALTKDGAVLCMDAKFGFDDNAEFRQQEV 259

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD+S+E+  E+EA++ NL++I LDG+IGC+VNGAGLAMATMD++ L+GG PANFLDV
Sbjct: 260 FSLRDISQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFLDV 319

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V  AF+I+ +D  VK I INIFGGIMRCD + +G++ A KE+ +NIPLV+RL
Sbjct: 320 GGGATPETVKKAFEILLADPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLNIPLVVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +G       ++I +SGL +I    LD+AA+K V 
Sbjct: 380 KGTKEAEAKQMIKDSGLTIIPFDSLDEAAEKAVQ 413


>gi|50302613|ref|XP_451242.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640373|emb|CAH02830.1| KLLA0A05478p [Kluyveromyces lactis]
          Length = 422

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/395 (43%), Positives = 251/395 (63%), Gaps = 5/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y V   KG    +V  A    K L G   VVK+Q   GGRGKG F 
Sbjct: 26  LSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGGRGKGHFD 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 + G+ +  S++       ++LG  LITKQ+G  G  V+ VY+ +  +   E YL
Sbjct: 86  N---GMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKHEAYL 142

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     I S++GGM+IE+VAK  P  I K  ++  +G+T E  A +   L   
Sbjct: 143 SILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAASLGFS 202

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPL--IIMKNGRLRVLDSKISFDDNALYRHLD 238
            +A  D  D    LYK F +KD + +EINPL  ++ ++ ++  +D+K  FDDNA +R  D
Sbjct: 203 KEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASFRQKD 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD+++ED  E+ AK+ +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFLD
Sbjct: 263 VYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AFK+I S+ +V  I +NIFGGI+RCD + +G+++A K + + +P+V R
Sbjct: 323 CGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPIVAR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G N++ G R+IAESGL + +  +LD AA+K+V 
Sbjct: 383 LQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVE 417


>gi|171689266|ref|XP_001909573.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944595|emb|CAP70706.1| unnamed protein product [Podospora anserina S mat+]
          Length = 446

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 246/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL++Y + V KG V  S   AE+  K++     V+K+Q+ AGGRGKG F 
Sbjct: 36  LSIHEYISADLLKQYGIDVPKGAVAKSAAEAEAVAKSIGSDDMVIKAQVLAGGRGKGTFD 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 96  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCNSVYICERKFARREFYL 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID  +GVT E    +   L   
Sbjct: 153 AVLMDRGSQGPVIVSSSQGGMDIEGVAKENPDAINTTYIDINVGVTDEMARDIAVKLGFS 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYK F +KD + +EINPL    + ++  +D+K +FDDNA +R  +  
Sbjct: 213 EQCVDDAVKTIQNLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFNFDDNAEFRQKEAF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 273 EWRDTTQEDADEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + IP++ RL+
Sbjct: 333 GGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  +RLI +SG+ + +  DL +AA+K V   K
Sbjct: 393 GTNMEEAHRLINDSGMKIFSIDDLQNAAEKAVQLSK 428


>gi|302694909|ref|XP_003037133.1| hypothetical protein SCHCODRAFT_47353 [Schizophyllum commune H4-8]
 gi|300110830|gb|EFJ02231.1| hypothetical protein SCHCODRAFT_47353 [Schizophyllum commune H4-8]
          Length = 402

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 248/396 (62%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKG 57
           ++IHEYQ+  LL  Y +P  KGV   +   A +A+K          VVK+Q+ AGGRGKG
Sbjct: 7   LSIHEYQSVQLLNSYGIPTPKGVPAKTKEEAVAALKQFQSEGKDSVVVKAQVLAGGRGKG 66

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F       KGGV + SS   V +   ++LG+ LITKQTG  G   N V + +  +   E
Sbjct: 67  MFDN---GFKGGVHMASSANEVENLAGKMLGAKLITKQTGERGRPCNTVMIAEAREPAHE 123

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+++L DR +  +  +AS QGGM+IEEVA   P  I    ID   G++ E+  ++   L
Sbjct: 124 YYVAVLNDRVTQGIVLVASAQGGMNIEEVAAKDPDAIITTPIDFDKGLSIEEGKAIAAKL 183

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             + + + +   +F NL K F +KD + +EINPL   K+G +  +D+K  FD+NA +R  
Sbjct: 184 GFKPELQAEAAGIFSNLVKIFKEKDATQIEINPLAETKDGAVLCMDAKFGFDENAEFRQK 243

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DI  LRD+S+E+  E+EA +  L++I LDG+IGC+VNGAGLAMATMD++ L+GG PANFL
Sbjct: 244 DIFALRDISQEEPSEVEAAKAGLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFL 303

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  D V  AF+++ SD  VK I INIFGGIMRCD + +G++ A KE+++ IPLV+
Sbjct: 304 DVGGGATPDTVKKAFELLLSDPKVKSIFINIFGGIMRCDYIAEGVIKATKELQMTIPLVV 363

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G        +I ESGL +I    LDDAA++ V 
Sbjct: 364 RLKGTKEAEAKAMIKESGLKIIAFDGLDDAAERAVQ 399


>gi|307183642|gb|EFN70345.1| Probable succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Camponotus floridanus]
          Length = 421

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 252/396 (63%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLR   V V    ++  +    SA++ L    +V+K+Q+ AGGRGKG F 
Sbjct: 27  LNLLEYQSKELLRDSGVSVQNFAIVDDLSKTNSALEKLHADEFVIKAQVLAGGRGKGWFD 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +     +V + ++ +LG  LITKQT   G  V  + + +  DI  E Y+
Sbjct: 87  N---GFKGGVHLTKDRNAVSNYVKNMLGHRLITKQTSKDGILVQKIMIAESVDIAYETYI 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA+ YP+KI  + +D   G+  E    +C  L   
Sbjct: 144 CILMDRQYNGPVLIASPAGGMDIETVAEKYPEKIKTVPLDIYYGIDDEIAQDVCTFLGFS 203

Query: 181 GQARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
               ++       NL+K F D D   +EINPL+   + ++  +D+KI+FDDNA +R   +
Sbjct: 204 DPDVLNKAIYELKNLWKLFVDIDALQIEINPLVETTDKQVIAVDAKIAFDDNAQFRQQTL 263

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L DVSE+D RE++A ++NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLDV
Sbjct: 264 FALEDVSEKDPREVDASRYNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDV 323

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   +D+V  AF+I++ D  VK IL+N+FGGI+ C  + +GI++A + + + IPLV+RL
Sbjct: 324 GGSVREDQVFQAFRILSEDPKVKAILVNVFGGIVNCITIARGIIAASQNLGLQIPLVVRL 383

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV    +++AESGL ++TA +LD+AA+K V +V
Sbjct: 384 EGTNVTEAKKVLAESGLPILTANNLDEAARKAVTSV 419


>gi|285017465|ref|YP_003375176.1| succinyl-CoA synthetase beta chain (scs-beta) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283472683|emb|CBA15188.1| hypothetical succinyl-coa synthetase beta chain (scs-beta) protein
           [Xanthomonas albilineans]
          Length = 387

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 178/386 (46%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L   Y +PV  G + S+   A  A   L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFANYGIPVPAGRIASTPEEAVEAANALGDGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T Q+      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMATYQSAGVALPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    + +I S++GG+DIEEVA   P+KI  L++D   GV       +   + L 
Sbjct: 111 SLLVDRDQKSITYIVSSEGGVDIEEVAATTPEKIHTLVVDYAEGVQPYQGREIGFKMGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   LY  F DKD+SL+E+NPL I+ +  L  LD K++ DDNA +R  D+ 
Sbjct: 171 AKQANQLANIMGGLYALFNDKDLSLVELNPLAILDDQNLYALDGKVNSDDNATFRRKDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E++A +H+L+Y+ +DGNIGCMVNGAGLAMATMD+I L GGAPANFLDVG
Sbjct: 231 AMRDTTQEDETEVKASEHDLNYVTMDGNIGCMVNGAGLAMATMDVIALNGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S   VK I +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKLILSSDKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVDVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+ G  L+A+SGL +  A D++D
Sbjct: 351 GTNVEAGKTLLADSGLAITPADDIND 376


>gi|195111100|ref|XP_002000117.1| GI10056 [Drosophila mojavensis]
 gi|193916711|gb|EDW15578.1| GI10056 [Drosophila mojavensis]
          Length = 451

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 183/393 (46%), Positives = 242/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + N+P  +  V  +   A    K L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESNIPTPRFAVAKNGKEAHDIAKKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    KS      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVFDPKSAEEISSKMIDQLLVTKQTGEAGRLCKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA+D P  I    ID   G+T E    + D + L 
Sbjct: 155 AVMLERAFNGPVLIASKEGGVDIEEVARDSPDAIIYEPIDIGKGLTKEQACRVIDKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +  D+  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GENAQEHVDMLLNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SLRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVMCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRNSGLKILARDDLDKAADMAVH 427


>gi|118474689|ref|YP_892081.1| succinyl-CoA synthetase beta chain [Campylobacter fetus subsp.
           fetus 82-40]
 gi|189046901|sp|A0RPE8|SUCC_CAMFF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118413915|gb|ABK82335.1| succinyl-CoA synthetase beta chain [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 385

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 181/390 (46%), Positives = 244/390 (62%), Gaps = 14/390 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK LLR + + VA G+++ SV  A +A K L G ++ VK+QIHA         
Sbjct: 1   MNIHEFQAKELLRDFGINVADGIMVVSVDDALNAAKKLGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG TL+TKQTGP G  V  +Y+E G +I +E YL
Sbjct: 52  -GGRGLGGGVKIAKSLDEVKEYASKILGMTLVTKQTGPEGKLVKKLYIEKGTNIDKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL  DR +  +A IAS  GGM+IEEV  D   KI  + IDP IG+      ++ D L L 
Sbjct: 111 SLTFDRINECIAVIASADGGMNIEEVDHD---KIITIRIDPQIGLRDFHSLAIADFLNLD 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +    L   LY+ +   D +L+EINPL++ K   L  LD+K+ FDD+AL+R   I 
Sbjct: 168 KDLSVKLHVLLSKLYRLYWQTDSNLVEINPLVLTKENDLIPLDAKMGFDDSALFRQEKIA 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EE+  E+EAK + LSY+ LDGNIGCMVNGAGLAM TMD I   GG PANFLDVG
Sbjct: 228 NMRDIDEEEPSELEAKTYGLSYVKLDGNIGCMVNGAGLAMGTMDTINGVGGKPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+   VA AF+II  D +VK I +NIFGGI+RCD +  GIL A K  K+ +P+++RL+
Sbjct: 288 GGANPQTVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIANGILEATKLTKVEVPVIVRLD 347

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
           G N      ++ ++ + N+I+A DL+  A+
Sbjct: 348 GTNAKEAAEILKQANITNIISAPDLESGAK 377


>gi|119179674|ref|XP_001241383.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 443

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 249/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + V KG V  +   AE+  K L G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGVPKGEVARTADEAEAVAKQLGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRILYSPTEARMFAGQMIGHKLVTKQTGARGRICNAVYICERKYARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVSSSQGGMDIEAVAKENPEAITTTKIDINVGVTDEIARKIAAGLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F ++D + +EINPL    + R+  +D+K++FDDNA +R  ++ 
Sbjct: 210 EQCLEEAKDTIQKLYKVFMERDATQIEINPLAETTDYRVLAMDAKLNFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P+V RL+
Sbjct: 330 GGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL +AA+K V   K
Sbjct: 390 GTNMEKAHQLINDSGLKIFSIEDLQNAAEKSVQFSK 425


>gi|303320965|ref|XP_003070477.1| succinyl-CoA ligase (GDP-forming), putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240110173|gb|EER28332.1| succinyl-CoA ligase (GDP-forming), putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|320036098|gb|EFW18038.1| succinyl-CoA ligase beta-chain [Coccidioides posadasii str.
           Silveira]
          Length = 443

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 249/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + V KG V  +   AE+  K L G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGVPKGEVARTADEAEAVAKQLGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRILYSPTEARMFAGQMIGHKLVTKQTGARGRICNAVYICERKYARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVSSSQGGMDIEAVAKENPEAITTTKIDINVGVTDEIARKIAAGLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F ++D + +EINPL    + R+  +D+K++FDDNA +R  ++ 
Sbjct: 210 EQCLEEAKDTIQKLYKVFMERDATQIEINPLAETTDYRVLAMDAKLNFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P+V RL+
Sbjct: 330 GGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL +AA+K V   K
Sbjct: 390 GTNMEKAHQLINDSGLKIFSIEDLQNAAEKSVQFSK 425


>gi|326800730|ref|YP_004318549.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sphingobacterium
           sp. 21]
 gi|326551494|gb|ADZ79879.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sphingobacterium
           sp. 21]
          Length = 396

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 183/398 (45%), Positives = 247/398 (62%), Gaps = 20/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ KA+L+ + V + +G+V  +   A  A K L         VVK+QIHA     
Sbjct: 1   MNIHEYQGKAILKSFGVRIQEGIVADNPEQAVEAAKKLKQDYNSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  ++  V    +EI+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNIDEVREKAKEIIGMQLVTPQTGPAGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR+ G    + ST+GGMDIEEVA+  P  I K  IDP IG+      
Sbjct: 111 ASETKEFYMSVLLDRSRGRNIIMYSTEGGMDIEEVAEKTPHLIQKEEIDPSIGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+   D S  EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLSGAAFKDMTKFVAALYKAYEATDSSQFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHADYAELRDLSEEDPTEVEAGRSNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 EPANFLDVGGTANAETVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           I +P+++RL+G N +   +LI ESGL V +AI L +AA
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLEVFSAIQLKEAA 388


>gi|58259261|ref|XP_567043.1| succinate-CoA ligase (ADP-forming) [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134107401|ref|XP_777585.1| hypothetical protein CNBA7060 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260279|gb|EAL22938.1| hypothetical protein CNBA7060 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223180|gb|AAW41224.1| succinate-CoA ligase (ADP-forming), putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 418

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 246/386 (63%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K +   S   AES  K+      V+K+Q+ AGGRGKG F 
Sbjct: 25  LSIHEYQSVQLLNSYGIPTPKALPAFSAAEAESVAKSFGKDELVIKAQVLAGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S         ++LG  LITKQTG  G   N V + +     +E Y 
Sbjct: 85  ---SGFQGGVQMVDSPAQAKEYAEKMLGYKLITKQTGAAGRICNAVMLAERMPPQKEYYA 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DRT+G    + S+QGGM+IE+VAK+ P  I    +D   G++  +   L   L  +
Sbjct: 142 AILNDRTTGGPVLVTSSQGGMNIEDVAKETPDAIITTPLDFDNGISHAEALELAKKLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+ +  D+F  LY  F +KD + +EINPL  + NG++  +D+K  FDDNA +R  D+ 
Sbjct: 202 ENAQKNAADVFGKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQKDVF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED++E+EA ++ L++I LDG+IGC+VNGAGLAMATMD++ L+GG+PANFLDVG
Sbjct: 262 KLRDTTQEDAQEVEAAEYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF+++ +  +VK I +NIFGGIMRCDV+ +GI+ A KE+ + IPLV+RL+
Sbjct: 322 GGATAEAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELHLEIPLVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G   +   ++I ESGL +     LD+
Sbjct: 382 GTKEEEAKQMIRESGLKIFPFDGLDE 407


>gi|282891425|ref|ZP_06299924.1| hypothetical protein pah_c161o043 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498710|gb|EFB41030.1| hypothetical protein pah_c161o043 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 387

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 172/381 (45%), Positives = 237/381 (62%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY VP++   VIS +      +  L     V+K Q+HAGGRGK    
Sbjct: 1   MNIHEFQAKNILKKYGVPISDYAVISKLEQLPHVLDQLKLDEAVLKIQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +    + +LG  L+  QTGP G   + + +    D+ +E YL
Sbjct: 58  -------GGVKIARSREEIRETAKTLLGMKLVNNQTGPEGVVAHQIIISPLVDVKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR       IAS +GGMDIEEVA+ +P KI  + I     +       +   +  +
Sbjct: 111 GAIIDRKKAQAVLIASPEGGMDIEEVAEKFPDKIMTVPISFNGDLKPFQQLKISQFMGWK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L  N+ KAF + D SLLEINPL++  +  L  LD+K+S D+NALYR  +I 
Sbjct: 171 GDIAKQGMRLAKNIAKAFIETDASLLEINPLVLNAHDELIALDAKLSVDENALYRQPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S+  + E  AK+++L+Y+ALDG IGCMVNGAGLAMATMDII  YGGAPANFLDVG
Sbjct: 231 SYYDPSQIPANEAAAKEYDLAYVALDGEIGCMVNGAGLAMATMDIIHHYGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q+KVA  FKII +D  VK IL+NIFGGIM C  L  GI+SA  E+ + +PL++R+E
Sbjct: 291 GGATQEKVAEGFKIILADPKVKAILVNIFGGIMNCVTLAAGIISAAGELNVTVPLIIRME 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G NV+ G +++ +SG+N++ A
Sbjct: 351 GTNVEKGKKMLQDSGVNIVIA 371


>gi|242794316|ref|XP_002482345.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218718933|gb|EED18353.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 444

 Score =  329 bits (844), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 174/398 (43%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V  G V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSADLLKSYGVGVPHGHVARTAEEAEAVAKQIDGDDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGARGRLCNAVYIVERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P+ I    ID   GVT +   S+   L   
Sbjct: 151 AILMDRQTQSPVIVSSSQGGMDIETVAKETPEAIRTTPIDIKTGVTDDIARSIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  +   NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 AQCIEDAKNTIQNLYKVFLEKDATQIEINPLTETSDHQVLAMDAKLGFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDPDEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P++ RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVTSIFVNIFGGIVRCDAIAQGLINVVRDMGLRTPVIARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI +S L +    DL  AA+K V   K V
Sbjct: 391 GTNMEQARKLIDDSNLKIFCIEDLQSAAEKSVQFSKVV 428


>gi|39978185|ref|XP_370480.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|59802928|gb|AAX07669.1| succinyl-CoA ligase beta-chain-like protein [Magnaporthe grisea]
 gi|145013447|gb|EDJ98088.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 446

 Score =  329 bits (843), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 242/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL KY V V  G V  S   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 36  LSIHEYLSAELLSKYGVQVPAGRVARSGEEAEQVAKEIGHDDMVIKAQVLAGGRGKGTFD 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 96  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRPCNAVYICERKFARREFYL 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT E    +   L   
Sbjct: 153 AILMDRGSQSPVIVSSSQGGMDIEGVAKENPDAIVTTHIDINTGVTDETARDIAQKLGFS 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KDM+ +EINPL    + ++  +D+K  FDDNA +R  +I 
Sbjct: 213 EQCIEDAKDTIQKLYKIFIEKDMTQIEINPLSETSDHKVMCMDAKFGFDDNAEFRQKEIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 273 EKRDTTQEDAEEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  + +NIFGGI+RCD +  G+++ VK + + +P++ RL+
Sbjct: 333 GGATPAAIKEAFELITSDQKVSAVFVNIFGGIVRCDHIANGLINTVKTLNLKVPIIARLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+  +++I +SG+ + +  DL  AA+K V   K
Sbjct: 393 GTNVEQAHQIINDSGMKIFSIDDLQSAAEKAVQLSK 428


>gi|302507602|ref|XP_003015762.1| hypothetical protein ARB_06073 [Arthroderma benhamiae CBS 112371]
 gi|302667905|ref|XP_003025531.1| hypothetical protein TRV_00293 [Trichophyton verrucosum HKI 0517]
 gi|291179330|gb|EFE35117.1| hypothetical protein ARB_06073 [Arthroderma benhamiae CBS 112371]
 gi|291189645|gb|EFE44920.1| hypothetical protein TRV_00293 [Trichophyton verrucosum HKI 0517]
          Length = 444

 Score =  329 bits (843), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGEEAEAIAKNIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    ID   GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDAITTTPIDIHTGVTDEIARNIATGLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 EQCVPEAVETIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  + LI+ESGL + +  DL  AA+K V   K
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSK 426


>gi|320161460|ref|YP_004174684.1| succinyl-CoA synthetase beta chain [Anaerolinea thermophila UNI-1]
 gi|319995313|dbj|BAJ64084.1| succinyl-CoA synthetase beta chain [Anaerolinea thermophila UNI-1]
          Length = 380

 Score =  328 bits (842), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 183/397 (46%), Positives = 250/397 (62%), Gaps = 20/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ+KA+  +Y VP+ KG   +    A+   + L G + V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYQSKAIFHRYGVPIPKGRTTTMASEAKHFAEELGGKV-VIKAQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  + K       E L +T++  +    G  V  + V++     +E+YL
Sbjct: 57  -------GGIRLAKTPKEA-----EELATTILGMEI--KGLPVRKILVDEAVSFEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  DR +     +AS  GG+DIEEVA+  P+KI K+ IDPL+G+       L   ++L 
Sbjct: 103 GITNDRGARRPVMMASAAGGVDIEEVARVSPEKIIKIHIDPLLGLREYQARDLAVSIDLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   L+KA+ + D +L EINPL+I  + +L  LD K+  DDNAL+RH D+ 
Sbjct: 163 RPLWRSFAEVAYGLWKAYTENDATLAEINPLVITSDKKLLALDGKMVVDDNALFRHPDLV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+  ED  EIEA++  LSYI+LDG IGCMVNGAGLAMATMDIIKL GG PANFLD+G
Sbjct: 223 EMRDLDAEDWAEIEARKFGLSYISLDGEIGCMVNGAGLAMATMDIIKLCGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KVAAA +II SD  VK +L NIFGGI RCD + +GIL+A+ EVK NIP+V+RL 
Sbjct: 283 GGAGAEKVAAALRIILSDPKVKAVLFNIFGGITRCDEVARGILTALAEVKPNIPMVVRLV 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G RL+AE+   +ITA  L +AAQK V  VKG
Sbjct: 343 GTNAEEGRRLLAEA--KMITAETLLEAAQKAVAVVKG 377


>gi|145521150|ref|XP_001446430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413908|emb|CAK79033.1| unnamed protein product [Paramecium tetraurelia]
          Length = 426

 Score =  328 bits (842), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 187/410 (45%), Positives = 258/410 (62%), Gaps = 18/410 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRF 59
            ++HEYQ+K L+R +NV V KG +  +   A    KTL P    ++KSQ+HAGGRGKG  
Sbjct: 19  FDLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGKGT- 77

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LY
Sbjct: 78  --LSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLY 135

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+ ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+L
Sbjct: 136 LAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLTDQIANKVVDTLQL 195

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHLD 238
           Q   R    +   NLYK F   D + +EINP        +L  +D+KI+ DDNA +R  +
Sbjct: 196 QS-VRQQAVEQLRNLYKMFISLDATQVEINPWQATDPKNQLFCIDAKINVDDNAKFRQKE 254

Query: 239 IQELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           + ELR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PA
Sbjct: 255 LVELRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGEPA 314

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  P
Sbjct: 315 NFLDVGGGANVEQVKTAFEILNSHPRVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTP 374

Query: 355 LVMRLEGANVDIGNRLI-----AESGLNVITAIDLDDAAQ---KIVHAVK 396
           LV+RL G N   G +++     +++ +++ TA DLDDAAQ   KI H  K
Sbjct: 375 LVVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIAHTSK 424


>gi|195014872|ref|XP_001984094.1| GH16246 [Drosophila grimshawi]
 gi|193897576|gb|EDV96442.1| GH16246 [Drosophila grimshawi]
          Length = 420

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 183/389 (47%), Positives = 253/389 (65%), Gaps = 12/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  + +  +++   P YVVK+QI AGGRGKG F 
Sbjct: 28  LNLLEFQSKDLLQKYGVAIQQFKVLDNTSSDKQVVQSFDCPEYVVKAQILAGGRGKGTFD 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE Y+
Sbjct: 88  N---GFKGGVHITSNKGDVLSLSKQMIGNRLITKQTPKSGILVNKVMVARSVNITRETYI 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID---PLIGVTSEDVASLCDML 177
             L+DR       IAS  GGMDIE VA++ P+KI  + +D   P+   T  +VA     L
Sbjct: 145 CFLLDREHNGPVLIASPAGGMDIEAVAQETPEKIKTVPLDIGKPIPEATLLEVARF---L 201

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           E +G A     D    LY  F   D   +EINPL    +G +  +D+K++FDDNA +R  
Sbjct: 202 EFKGDAVKRCADEIQKLYTLFKAVDALQIEINPLAETDSGEVISVDAKLNFDDNAQFRQK 261

Query: 238 DIQELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           DI  + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PAN
Sbjct: 262 DIFAM-DVTEEEADPREVEANKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLRGGEPAN 320

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGG   +D+VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PL
Sbjct: 321 FLDVGGSVKEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPL 380

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDL 384
           V+RLEG NV     ++  SGL + TA DL
Sbjct: 381 VVRLEGTNVTKAREILKNSGLPIQTACDL 409


>gi|188990492|ref|YP_001902502.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           campestris str. B100]
 gi|226734998|sp|B0RPQ9|SUCC_XANCB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167732252|emb|CAP50444.1| succinate-CoA ligase (ADP-forming) beta subunit [Xanthomonas
           campestris pv. campestris]
          Length = 389

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 181/396 (45%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V S+   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTVTYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F DKD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|260459594|ref|ZP_05807848.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
 gi|259034396|gb|EEW35653.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 394

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 164/381 (43%), Positives = 245/381 (64%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL +Y V V +G +  S   A    + + G  +V+K+Q+H+G RGK    
Sbjct: 1   MDIHEYQAKELLARYGVHVPRGGLAYSPEQATYRAREIGGGKWVLKAQVHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++ + + S    +LG  L+T+QTGP G  ++ +Y+E+  DI +ELY+
Sbjct: 58  -------GGIKLCANDEEISSAAEAMLGRKLVTQQTGPRGKLISRLYLEEAVDIAQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  +AS  GGM+IE++ +  P  I +  +DP +G+       +   L L 
Sbjct: 111 GFVLDRKEERVMIVASAAGGMEIEDIVEKAPDSILRTSVDPGVGMQRFQAREIAFGLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +   + Y+ F D D S+LEINPL++ ++G L  LD+K+SFD+NAL+R  +I 
Sbjct: 171 HDLIGKATETIFSCYQVFRDYDASMLEINPLVVTRDGSLIALDAKMSFDENALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC++NGAGLAMATMD+IK+ GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRETFASDRGLSYVGLDGNIGCIINGAGLAMATMDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA +F+ +  D +V+ IL+NIF GI RCD + +G++ A++EV +N+PLV+RL 
Sbjct: 291 GGASPERVAKSFRAVLGDKNVETILVNIFAGINRCDWVAEGVVKAIREVGVNVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G   + G R++A+SG  VI A
Sbjct: 351 GTKAEEGRRILADSGEAVIVA 371


>gi|295671817|ref|XP_002796455.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb01]
 gi|226283435|gb|EEH39001.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb01]
          Length = 444

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V + KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGIPKGEVARTAEEAEAVAKQIGVDDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAAQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGG+DIE VAKD P  I    ID  +GVT +  A++   L   
Sbjct: 151 AILMDRKSQAPVIVSSSQGGVDIEGVAKDSPDAITTTHIDINVGVTDQMAANIARDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKDTIQKLYKVFMEKDATQIEINPLCETTDHQVLAMDAKFGFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDPDELKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL +AA+K V   K
Sbjct: 391 GTNMEQAHKLINDSGLKIFSIEDLQNAAEKSVQFSK 426


>gi|326435318|gb|EGD80888.1| succinyl-CoA ligase subunit beta [Salpingoeca sp. ATCC 50818]
          Length = 455

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 173/397 (43%), Positives = 255/397 (64%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHE  ++ L++ Y + VA+G    S   A +A K++     V+K+Q+ AGGRGKG F 
Sbjct: 30  LNIHEADSQELMKSYGLNVARGAKAKSPEEAVTAAKSMSTSKVVLKAQVLAGGRGKGVFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  GGV V  + +S + +I  +++G  LITKQTG  G   N + V +  ++ +E Y
Sbjct: 90  N---GFSGGVHVLDNDESKVREIASQMIGHNLITKQTGKEGRPCNMIQVVEAVNVQKEFY 146

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +     I S+QGGMDIE VA + P  I KL ID   G++ E   +    + +
Sbjct: 147 LALLLDRAAMGPVMIGSSQGGMDIEAVAAENPDAIVKLPIDIDGGLSMEAATNFARQMGI 206

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    D    LY+ F ++D SL+EINP   +    +  LD+K++FDDNA +R   +
Sbjct: 207 PDSCVDSAADQMVKLYQLFLERDCSLVEINPFAQVGPSEVMCLDAKLNFDDNAEFRQSGV 266

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E RD ++E+  ++EA + +L+YI LDGNIGC+VNGAGLAMATMDII+L+GG+PANFLDV
Sbjct: 267 FEKRDTTQENKADVEAAKFDLNYIQLDGNIGCLVNGAGLAMATMDIIQLHGGSPANFLDV 326

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +V  AFK+IT D +V  IL+NIFGGIMRCDV+ +GI+ A  ++ +++P+++RL
Sbjct: 327 GGGATARQVTEAFKLITQDPNVSAILVNIFGGIMRCDVIAEGIIHAASDLDLSVPIIVRL 386

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +G N +    +IA SGL++I++ +LDDAA + V   K
Sbjct: 387 QGTNREEAKEMIANSGLDIISSDELDDAAFRAVQLSK 423


>gi|189911526|ref|YP_001963081.1| succinyl-CoA synthetase subunit beta [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|226734962|sp|B0SAP0|SUCC_LEPBA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167776202|gb|ABZ94503.1| Succinyl-CoA synthetase, beta subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
          Length = 389

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/398 (48%), Positives = 265/398 (66%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRGKGR 58
           M +HEYQAK +LR++N  V  G VI +V   E A        P+ VVK+QIHAGGRGKG 
Sbjct: 1   MKVHEYQAKEILRRHNANVPFGKVIDAVGDFEKAYNEVVQKSPVVVVKAQIHAGGRGKGG 60

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++ A +K   +  +          +ILG  LIT QTGP G +V  VY+E G +I +E 
Sbjct: 61  GVKV-AKTKDDAKAAAE---------KILGMQLITPQTGPEGKKVLKVYLEQGLEIAKEY 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR       +AST+GGM+IEEVA+ +P+KI K+ IDP IG+    V  L   L 
Sbjct: 111 YLSILLDRAIRKTIIMASTEGGMEIEEVAETHPEKIIKIQIDPGIGIQGSQVRELAFALG 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           +  +A+     L  ++Y A+  +D +LLEINPLI+ K   +   D K+  D+NALYRH D
Sbjct: 171 IPTEAQKSFTALVNSVYNAYIKEDAALLEINPLILTKQNEIIAGDCKMDLDENALYRHPD 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + LRD++EED  E++AK++NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANFLD
Sbjct: 231 NEALRDITEEDPYEVKAKEYNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA+   V   F++I SD +VKGI +N+FGGI+RCD +  GI+ A K+V +++P+V+R
Sbjct: 291 VGGGANPTTVENGFRLILSDPNVKGIFVNVFGGIVRCDRVAVGIIEATKKVNVSVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N + G +++ ESG+N++    L DAA KIV  +K
Sbjct: 351 LKGTNAEEGKKILNESGMNIVGVEGLRDAADKIVSLIK 388


>gi|302836393|ref|XP_002949757.1| succinate-coa ligase beta chain, succinyl-CoA synthetase
           mitochondrial precursor [Volvox carteri f. nagariensis]
 gi|300265116|gb|EFJ49309.1| succinate-coa ligase beta chain, succinyl-CoA synthetase
           mitochondrial precursor [Volvox carteri f. nagariensis]
          Length = 421

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 168/378 (44%), Positives = 246/378 (65%), Gaps = 7/378 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP--GPLYVVKSQIHAGGRGKGR 58
            N+HEYQ   L+ K+ V V  G+   ++     A++ +       V+KSQI AGGRG GR
Sbjct: 29  FNVHEYQGAQLMSKFGVNVPPGIPAKTLDEVAQAVEQMADENGEVVLKSQILAGGRGLGR 88

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           F       +GGV +    ++ +   +++LG TL+TKQTGP G  VN + +     + RE+
Sbjct: 89  FTN---GLQGGVHIVPKARA-LELAKQMLGGTLVTKQTGPAGKPVNTLLIARKMKLRREM 144

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR +     I  ++GG  IE++A+ YP+KI K+ +D   G+T    A + + L 
Sbjct: 145 YFAILLDRKTAGPMMIGCSEGGTSIEDLAEKYPEKIIKVPVDSRTGITDAQAAKMVEGLR 204

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           + G  +         LY  F   D +++E+NPL    +G+L   D+K+ FDDNA YRH +
Sbjct: 205 VTGD-KAKAAQQIKALYDLFVKCDCTMVEVNPLAESLDGQLIAADAKLGFDDNAAYRHKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I +L+D S+ D RE+ A +++L+YI LDG+IGCMVNGAGLAMATMDIIK++GG+PANFLD
Sbjct: 264 IFDLKDESQIDPREVAAAKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGSPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A++ +V  AFKI+TSD  VK IL+NIFGGIM+CDV+ +GI++A K+V +++PLV+R
Sbjct: 324 VGGSANEQQVVEAFKILTSDKQVKAILVNIFGGIMKCDVIARGIVNAAKQVGVSVPLVVR 383

Query: 359 LEGANVDIGNRLIAESGL 376
           LEG NV  G  +I  SG+
Sbjct: 384 LEGTNVAQGKDIIRSSGM 401


>gi|183221438|ref|YP_001839434.1| succinyl-CoA synthetase subunit beta [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167779860|gb|ABZ98158.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 403

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/398 (48%), Positives = 265/398 (66%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRGKGR 58
           M +HEYQAK +LR++N  V  G VI +V   E A        P+ VVK+QIHAGGRGKG 
Sbjct: 15  MKVHEYQAKEILRRHNANVPFGKVIDAVGDFEKAYNEVVQKSPVVVVKAQIHAGGRGKGG 74

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++ A +K   +  +          +ILG  LIT QTGP G +V  VY+E G +I +E 
Sbjct: 75  GVKV-AKTKDDAKAAAE---------KILGMQLITPQTGPEGKKVLKVYLEQGLEIAKEY 124

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR       +AST+GGM+IEEVA+ +P+KI K+ IDP IG+    V  L   L 
Sbjct: 125 YLSILLDRAIRKTIIMASTEGGMEIEEVAETHPEKIIKIQIDPGIGIQGSQVRELAFALG 184

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           +  +A+     L  ++Y A+  +D +LLEINPLI+ K   +   D K+  D+NALYRH D
Sbjct: 185 IPTEAQKSFTALVNSVYNAYIKEDAALLEINPLILTKQNEIIAGDCKMDLDENALYRHPD 244

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + LRD++EED  E++AK++NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANFLD
Sbjct: 245 NEALRDITEEDPYEVKAKEYNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANFLD 304

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA+   V   F++I SD +VKGI +N+FGGI+RCD +  GI+ A K+V +++P+V+R
Sbjct: 305 VGGGANPTTVENGFRLILSDPNVKGIFVNVFGGIVRCDRVAVGIIEATKKVNVSVPVVVR 364

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N + G +++ ESG+N++    L DAA KIV  +K
Sbjct: 365 LKGTNAEEGKKILNESGMNIVGVEGLRDAADKIVSLIK 402


>gi|325921600|ref|ZP_08183441.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325922867|ref|ZP_08184591.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325923846|ref|ZP_08185455.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325545680|gb|EGD16925.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325546660|gb|EGD17790.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325547911|gb|EGD18924.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
          Length = 389

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 179/396 (45%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A  A  +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEAANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|21232524|ref|NP_638441.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767391|ref|YP_242153.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|24212431|sp|Q8P676|SUCC_XANCP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81306629|sp|Q4UXU0|SUCC_XANC8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21114315|gb|AAM42365.1| succinyl-CoA synthetase beta subunit [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|37784394|gb|AAP43026.1| SucC [Xanthomonas campestris pv. campestris]
 gi|66572723|gb|AAY48133.1| succinyl-CoA synthetase beta subunit [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 389

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 180/396 (45%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V S+   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F DKD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|170038855|ref|XP_001847263.1| succinyl-CoA ligase beta-chain, mitochondrial [Culex
           quinquefasciatus]
 gi|167862454|gb|EDS25837.1| succinyl-CoA ligase beta-chain, mitochondrial [Culex
           quinquefasciatus]
          Length = 419

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 179/395 (45%), Positives = 248/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    V+      E  +K      YVVK+QI AGGRGKG F 
Sbjct: 28  LNLLEYQSKKLLEQSGVAIQAFRVLEG-RKDEDVLKDFNVNEYVVKAQILAGGRGKGHFD 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +      VI  + +++G+ LITKQT   G  V  V V D  +I+RE YL
Sbjct: 87  N---GFKGGVHITKDRSKVIPLVEKMVGAKLITKQTPKDGILVKSVMVADSINIVRETYL 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P+KI  + I  L G++      +   LE +
Sbjct: 144 SIVMDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPISILAGISRAQAEDVARFLEFK 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL    +GR+  +D+K++FDDNA +R  DI 
Sbjct: 204 GPLVQTAATEIEKLYSLFQKVDCTQIEINPLAETDDGRVISVDAKLNFDDNAEFRQKDIF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +EIEA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 264 AMEVHEDTDPKEIEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI++A K + + +PLV+RLE
Sbjct: 324 GNVKEDQVLKAFQILTSDQNVKAILVNVFGGIVNCATIANGIVNATKVIGLRVPLVVRLE 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+   +++ ESGL + +A DLD+AA+K V A+
Sbjct: 384 GTNVNAAKKILQESGLKIESAQDLDEAAKKAVQAI 418


>gi|9789854|sp|P53587|SUCB_NEOFR RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           hydrogenosomal; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|4688953|emb|CAB41451.1| beta-succinyl CoA synthetase precursor [Neocallimastix frontalis]
          Length = 437

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 245/396 (61%), Gaps = 8/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL +YNV   KG+V  +   A  A K L     V+K+Q+ AGGRGKG F 
Sbjct: 28  LSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKLNTEDLVIKAQVLAGGRGKGHF- 86

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++  + + V     ++LG  LITKQTG  G   N VYV +     RE 
Sbjct: 87  ----DSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYAAREY 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR +     +AS++GG++IEEVAK  P  I  +      G+T E        + 
Sbjct: 143 YFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVALDTAKKMG 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              +      D F  LYK F +KD +++EINP+     G +  +D+K  FDDNA Y+   
Sbjct: 203 FTEKCVPQAADTFMKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKPKG 262

Query: 239 IQELRDVSEEDSREIEAK-QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           I  LRD ++ED RE+    + NL+Y+ ++GNIGC+VNGAGLAMATMDIIKL GG PANFL
Sbjct: 263 IFALRDTTQEDPREVAGHAKWNLNYVGMEGNIGCLVNGAGLAMATMDIIKLNGGVPANFL 322

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A   +V  AFKII+SD +V  IL+NIFGGIMRCD++ +G++ AVKE+ ++IPLV+
Sbjct: 323 DVGGSATAKQVKEAFKIISSDKAVSAILVNIFGGIMRCDIVAEGVIQAVKELGLDIPLVV 382

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+    LI  S L++    DLD AA+K+V 
Sbjct: 383 RLQGTKVEEARELIKNSNLSLYAIDDLDKAAKKVVQ 418


>gi|300769985|ref|ZP_07079864.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762461|gb|EFK59278.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 397

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 180/407 (44%), Positives = 251/407 (61%), Gaps = 20/407 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V + +G+V  +   A  A K +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKQILKSFGVTIQEGIVADTPEQAVEAAKKMKEDYNSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNLEEVKQRATDIIGMQLVTPQTGPEGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ASETKEFYMSVLLDRATGRNIVMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLSGPAHKEMVKFVAALYKAYDATDSSMFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RDV+EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDYAAMRDVTEEDPTEVEAGESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 EPANFLDVGGTANAETVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +   +KG
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLKVYSAILLKEAADLVTKVLKG 397


>gi|66548261|ref|XP_624343.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Apis mellifera]
          Length = 448

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/389 (46%), Positives = 246/389 (63%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 37  LNVHEHISYSLLNEAGVPTPKFGVAKTPDEAAKLAADLKSKDIVLKAQVLAGGRGKGHFK 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                +  GV++  + +       ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 97  ---GTNISGVKMCETPEEAKKLASQMLGKLLITKQTGEAGRICNAVMVTQRMFPRKEYYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T +    +   L LQ
Sbjct: 154 AVMMERAFGGPVIIASSQGGVNIEEVAATNPSAIMYEPIDIYKGITKDQAERIAIKLGLQ 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++  NLY+ F  KD  LLE+NPL    NG+   LD K  FDDNA +R  ++ 
Sbjct: 214 -NVKDYISNIIVNLYQMFLKKDALLLEVNPLAEDVNGQYFALDCKCRFDDNAEFRQKELF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED++E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 SLRDWTQEDTKEVEAAKYDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 333 GGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA +GL ++   DLD+AA+
Sbjct: 393 GTNVDEAKALIANAGLKIVPIDDLDEAAR 421


>gi|315041433|ref|XP_003170093.1| succinyl-CoA ligase beta-chain [Arthroderma gypseum CBS 118893]
 gi|311345127|gb|EFR04330.1| succinyl-CoA ligase beta-chain [Arthroderma gypseum CBS 118893]
          Length = 444

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGEEAEAIAKKIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    ID   GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDAITTTPIDIHTGVTDEIAHNIATGLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 EQCVPEAVETIKKLYKVFMERDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  + LI+ESGL + +  DL  AA+K V   K
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSK 426


>gi|227538435|ref|ZP_03968484.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241717|gb|EEI91732.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 397

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 181/407 (44%), Positives = 250/407 (61%), Gaps = 20/407 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V  +   A  A K +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKQILKSFGVTVQEGIVADTPEQAVEAAKKMKEDYNSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V     +I+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKQRATDIIGMQLVTPQTGPEGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ASETKEFYMSVLLDRATGRNIVMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLSGSAHKEMVKFVAALYKAYDATDSSMFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RDV+EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDYAAMRDVTEEDPTEVEAGESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 EPANFLDVGGTANAETVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +   +KG
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLKVYSAILLKEAADLVTKVLKG 397


>gi|312374636|gb|EFR22149.1| hypothetical protein AND_15704 [Anopheles darlingi]
          Length = 404

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 177/395 (44%), Positives = 248/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    ++     A+  +K      YV+K+QI AGGRGKG F 
Sbjct: 14  LNLLEYQSKKLLEESGVAIQNFRILEGKQDAD-VLKDFNVNEYVIKAQILAGGRGKGHFD 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +      VI  + +++G  LITKQT   G  V  V V D  +I+RE YL
Sbjct: 73  N---GFKGGVHITKDRSQVIPLVEKMVGHRLITKQTPKDGILVKKVMVADSINIVRETYL 129

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P KI  L ID   G+T E    +   LE +
Sbjct: 130 SIVMDRQHNGPVLIASPAGGMDIEAVAEETPDKIKTLPIDITAGITREQSLEVARFLEFR 189

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D   +EINPL    +GR+  +D+K++F+DNA +R  DI 
Sbjct: 190 GPLLERAADQIVKLYHLFTKVDAVQIEINPLAETDDGRVISVDAKLNFEDNAQFRQKDIF 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +EIEA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 250 AMEVHEDTDPKEIEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI+SA K + + +PL++RLE
Sbjct: 310 GNVKEDQVLKAFQILTSDENVKAILVNVFGGIVNCATIANGIVSATKSMNLKVPLIVRLE 369

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV    +++ +SGL + +A+DLD+AA+K V ++
Sbjct: 370 GTNVTAAKKILEQSGLKIQSAVDLDEAAKKAVASI 404


>gi|198433734|ref|XP_002131576.1| PREDICTED: similar to succinate-Coenzyme A ligase, ADP-forming,
           beta subunit [Ciona intestinalis]
          Length = 447

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 176/394 (44%), Positives = 247/394 (62%), Gaps = 5/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL++  +P   G V S+   A +  K L     VVK+Q+ AGGRGKG F 
Sbjct: 35  LSIHEYLSLGLLKEAGIPTPNGDVASTPEEAYNIAKNLSTSDSVVKAQVLAGGRGKGHF- 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S   V     ++LG+ LITKQTG  G   N V V +   + RE Y 
Sbjct: 94  --TSGLQGGVKIVYSPDEVKEVASQMLGNKLITKQTGQKGRICNKVLVVERKYVRREFYF 151

Query: 121 SLLVDRTSGMVA--FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           ++ ++R +       I S QGGMDIE VA   P+ I K  +D   G T E   +L   + 
Sbjct: 152 AITMERGTKQFGPVLIGSAQGGMDIEAVASKTPEAILKEYVDINNGCTEEQAVNLAKRMG 211

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                     D    +YK F  KD SL+EINP+    +G +  +D+K++FDDNA +R  +
Sbjct: 212 FTDSNCHQAADCILKMYKLFIAKDASLIEINPMAEDSDGNVMCMDAKLNFDDNAAHRQKE 271

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED R+ +A + +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 272 IFNLRDWSQEDDRDAQAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLD 331

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  D+V  AFK+ITSD +V  IL+NIFGGIMRCDV+ +GI+ A +++ + IP+++R
Sbjct: 332 VGGGATADQVMEAFKLITSDENVNSILVNIFGGIMRCDVIAQGIIQAAQQLDLKIPIIVR 391

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           L+G  V+    LIA+S L ++T   L++AA+ +V
Sbjct: 392 LQGTKVEDAKALIAQSQLKILTCDSLNEAAKMVV 425


>gi|322692276|gb|EFY84205.1| putative succinyl-CoA ligase [Metarhizium acridum CQMa 102]
          Length = 473

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 243/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y V V KG V  +   A++  K +     V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYRSADLLRQYGVGVPKGAVAKTAEEAKAVAKEIGTEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S        ++++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPHEAEMFAQQMIGHKLITKQTGAGGRLCNAVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT +    +   L   
Sbjct: 154 AILMDRASQSPVIVSSSQGGMDIETVAKESPDAIITTYIDINTGVTDDIARGIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F ++D + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 214 EQCIEDAKDTIQKLYKIFVERDSTQIEINPLSETNDHQVLCMDAKFGFDDNANFRQKEVF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED  E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 EWRDTTQEDPDEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 334 GGATPAAIQEAFELITSDPKVTAIFVNIFGGIVRCDHIATGLIKTVENLNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+  +++I ESG+ + +  DL  AA+K V   K
Sbjct: 394 GTNVERAHKIINESGMKIFSIDDLQSAAEKSVQLSK 429


>gi|13471373|ref|NP_102939.1| malate--CoA ligase subunit beta [Mesorhizobium loti MAFF303099]
 gi|21263794|sp|Q98KT9|MTKA_RHILO RecName: Full=Probable malate--CoA ligase subunit beta; AltName:
           Full=MTK-beta; AltName: Full=Malate thiokinase; AltName:
           Full=Malyl-CoA synthetase
 gi|14022115|dbj|BAB48725.1| succinyl-CoA synthetase beta subunit [Mesorhizobium loti
           MAFF303099]
          Length = 394

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 163/381 (42%), Positives = 245/381 (64%), Gaps = 10/381 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL ++ V V +G +  S   A    + + G  +V+K+Q+H+G RGK    
Sbjct: 1   MDIHEYQAKELLARHGVHVPRGGLAYSPEQATYRAREIGGGKWVLKAQVHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++ + + S    +LG  L+T+QTGP G  ++ +Y+E+  DI +ELY+
Sbjct: 58  -------GGIKLCANDEEISSAAEAMLGRKLVTQQTGPRGKLISRLYLEEAVDIAQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  +AS  GGM+IE++ +  P  I +  +DP +G+       +   L L 
Sbjct: 111 GFVLDRKEERVMIVASAAGGMEIEDIVEKEPNSILRTSVDPGVGMQRFQAREIAFGLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +   + Y+ F D D S+LEINPL++ ++G L  LD+K+SFD+NAL+R  +I 
Sbjct: 171 HNLIGKATETIFSCYQVFRDYDASMLEINPLVVTRDGNLIALDAKMSFDENALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC++NGAGLAMATMD+IK+ GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRETFASDRGLSYVGLDGNIGCIINGAGLAMATMDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA +F+ +  D +V+ IL+NIF GI RCD + +G++ A++EV +N+PLV+RL 
Sbjct: 291 GGASPERVAKSFRAVLGDKNVETILVNIFAGINRCDWVAEGVIKAIREVGVNVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITA 381
           G   + G R++A+SG  VI A
Sbjct: 351 GTKAEEGRRILADSGEAVIVA 371


>gi|289741223|gb|ADD19359.1| GTP-specific succinyl-CoA synthetase beta subunit [Glossina
           morsitans morsitans]
          Length = 414

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 176/398 (44%), Positives = 261/398 (65%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KYNV + +  ++ S +  ++ ++    P YVVK+QI AGGRGKG F 
Sbjct: 21  LNLLEFQSKDLLQKYNVAIQQFQILDSSNNDKTVLEKFDCPEYVVKAQILAGGRGKGVFD 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + +S + V++  ++++G+ LITKQT  +G  V  V V    +I+RE YL
Sbjct: 81  N---GFKGGVHITTSKEEVLNLSKKMIGNRLITKQTPKSGITVKKVMVARSVNIVRETYL 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GG+DIE VA++ P+KI  + ++    +  + +  +   L+ +
Sbjct: 138 CILLDREHNGPVLIASPAGGVDIETVAEETPEKIKTVPLNIDQPIPEQTLMEVAKFLDFK 197

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A          LY  F   D   +EINP      G +  +D+K++FDDNA +R  +I 
Sbjct: 198 GAAIKTCAAEIQKLYTLFKAVDAVQIEINPFAETDKGEVISVDAKLNFDDNAEFRQKEIF 257

Query: 241 ELRDVSEEDS--REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + D+SEE+S  RE+EA ++NL+Y+ +DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 258 SM-DISEEESDHREVEATKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLNGGDPANFLD 316

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +++V  AF+I+TSD  VK IL+N+FGGI+ C  +  G+++A K + +N+PLV+R
Sbjct: 317 VGGGVKEEQVLKAFQILTSDPKVKSILVNVFGGIVNCATIANGVVTASKVLNLNVPLVVR 376

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NV    +++ +SGL + TA DLDDAAQK V+A++
Sbjct: 377 LEGTNVTEARKILKDSGLAIQTASDLDDAAQKAVNALQ 414


>gi|190575606|ref|YP_001973451.1| succinyl-CoA synthetase subunit beta [Stenotrophomonas maltophilia
           K279a]
 gi|194366936|ref|YP_002029546.1| succinyl-CoA synthetase subunit beta [Stenotrophomonas maltophilia
           R551-3]
 gi|254524453|ref|ZP_05136508.1| succinyl-CoA synthetase beta subunit [Stenotrophomonas sp. SKA14]
 gi|226734993|sp|B4ST72|SUCC_STRM5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734994|sp|B2FRS3|SUCC_STRMK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|190013528|emb|CAQ47163.1| succinyl-CoA synthetase beta chain [Stenotrophomonas maltophilia
           K279a]
 gi|194349740|gb|ACF52863.1| succinyl-CoA synthetase, beta subunit [Stenotrophomonas maltophilia
           R551-3]
 gi|219722044|gb|EED40569.1| succinyl-CoA synthetase beta subunit [Stenotrophomonas sp. SKA14]
          Length = 389

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 180/396 (45%), Positives = 261/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A +A  +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVAAANSLGQGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMATYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDPTEVIASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+KIV AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKIVEAVK 386


>gi|289621048|emb|CBI51831.1| unnamed protein product [Sordaria macrospora]
          Length = 447

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 245/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V +G V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGIGVPQGDVARNGAEAEAIAKKIGGEDMVIKAQVLAGGRGKGSFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   + VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSSVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    +D  +GVT +    +   L   
Sbjct: 154 AVLMDRASQGPVIVSSSQGGMDIEGVAKENPDAIHTTYVDINVGVTDDMARGIAQKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA YR  DI 
Sbjct: 214 EQCVEEAKDTIQKLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFGFDDNADYRQKDIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED  E+ A Q  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 QLRDTTQEDPDEVRAAQSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + IP++ RL+
Sbjct: 334 GGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SG+ + +  DL  AA+K V   K
Sbjct: 394 GTNMEAAHQLINDSGMKIFSIDDLQSAAEKSVQLSK 429


>gi|218659245|ref|ZP_03515175.1| succinyl-CoA synthetase subunit beta [Rhizobium etli IE4771]
          Length = 288

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 162/266 (60%), Positives = 205/266 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV +  V   E+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 17  MNIHEYQAKALLKGYGAPVAEGVAVLKVEEVEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 76

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 77  ELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++   L L+
Sbjct: 137 SLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKALALE 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+MK+G LRVLD+K+SFD NAL+RH D+ 
Sbjct: 197 GAAAEDAKSLFPALYKAFNEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVT 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD 266
            LRD +EED++     Q +L+Y+ALD
Sbjct: 257 TLRDETEEDAKGNRGLQVDLAYVALD 282


>gi|332023778|gb|EGI64002.1| Putative succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Acromyrmex echinatior]
          Length = 424

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 172/397 (43%), Positives = 251/397 (63%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLR   + V    ++  +    SA++ L    +V+K+Q+ AGGRGKG F 
Sbjct: 30  LNLLEYQSKELLRDSGISVQNFTIVEDLTQMNSALEKLHTDEFVIKAQVLAGGRGKGWFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +     +V + ++ +LG  LITKQT   G  V  + + +  DI RE Y+
Sbjct: 90  N---GFKGGVHLTKDRNAVANYVKNMLGHRLITKQTSKDGILVQKIMIAESVDIARETYV 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA+ YP++I  + +D   G+  E    +C  L   
Sbjct: 147 CILMDRQHNGPVLIASPAGGMDIEAVAEKYPEQIKTVTLDIYHGIDDEIAKDVCVFLGFS 206

Query: 181 GQARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
               +        NL+K F D D   +EINPL+   + ++  +D+KI+FDDNA +R  D+
Sbjct: 207 DTDILKKAIYELKNLWKLFVDIDALQVEINPLVETTDKQVVAVDAKIAFDDNAQFRQQDL 266

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D+SE+D RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLD+
Sbjct: 267 FALEDISEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDI 326

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   +D+V  AF+I++ D  VK IL+N+FGGI+ C  + KGI++A + + + IP V+RL
Sbjct: 327 GGNVKEDQVFQAFRILSEDPKVKVILVNVFGGIVNCVTIAKGIIAAAQNLGLKIPFVVRL 386

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG NV    ++++ESG  ++TA +LD+AA+K V +VK
Sbjct: 387 EGTNVTEAKKVLSESGFPILTASNLDEAAKKAVISVK 423


>gi|168001359|ref|XP_001753382.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695261|gb|EDQ81605.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 426

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 181/388 (46%), Positives = 248/388 (63%), Gaps = 6/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT--LPGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ  AL+ K+ V V KG V+SS       ++   L     VVKSQ+ AGGRG G 
Sbjct: 32  LNIHEYQGAALMSKFGVNVPKGAVVSSTSEIAKVLEEQFLDDTELVVKSQVLAGGRGLGT 91

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      KGGV +      V     ++LG  L+TKQTG  G  VN V++ +  +++ E+
Sbjct: 92  FKN---GLKGGVHIVKR-DQVEEMAGKMLGQVLVTKQTGAEGKPVNQVFLCEKLNLINEM 147

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR S     IA  +GG  IE++A+ YP +I K+ I+   G++ E+   +   L 
Sbjct: 148 YFAIALDRASAGPVMIACAKGGTSIEDLAEKYPDQIIKVPININKGISDEEAEKVVKGLA 207

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +      G D     YK F + D + +EINPL     G +   D+K++FDDNA +R  +
Sbjct: 208 PKKVDMQQGIDQIKKFYKLFTETDCTQVEINPLAETSTGVMMAADAKLNFDDNAAFRQKE 267

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL GG PANFLD
Sbjct: 268 IFAMRDTTQEDPREVAAGKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLSGGTPANFLD 327

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD+ VK IL+NIFGGIM+CDV+  GI++A K+V + +PLV+R
Sbjct: 328 VGGNATEQQVVEAFKILTSDTRVKAILVNIFGGIMKCDVIAAGIVAAAKQVNLKVPLVVR 387

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NVD+G  ++ ESG+ +ITA DLDD
Sbjct: 388 LEGTNVDVGKTILKESGMTIITADDLDD 415


>gi|46446932|ref|YP_008297.1| succinate-CoA ligase (ADP-forming) beta chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|81626858|sp|Q6MBM7|SUCC_PARUW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|46400573|emb|CAF24022.1| probable succinate-CoA ligase (ADP-forming) beta chain [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 389

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 169/386 (43%), Positives = 245/386 (63%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HE+QAK +LRKY +PV    + SS    E  IK       ++K Q+HAGGRGK    
Sbjct: 1   MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQYQLQSAIIKVQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + ++   +E++G  +I +QTGP+G   + V +     I +E YL
Sbjct: 58  -------GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAILIKKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + ++R       IAS  GG++IE++A + P ++  L I       S  +  +   +  +
Sbjct: 111 GITINRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPIPLEETFRSYHLIRIASFMGWK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +G  +  +L KAF + D SLLEINPL+  K G L  LD+K+S DDNAL++H D++
Sbjct: 171 GKQIQEGVAIIQSLVKAFKETDASLLEINPLVETKEGHLLALDAKLSIDDNALFKHEDLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+  + E  A+Q  L+Y+AL+G IGCMVNGAGLAMATMD+I+ +GG PANFLDVG
Sbjct: 231 TLFDPSQMSNNEARAQQFELAYVALEGEIGCMVNGAGLAMATMDLIQYHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q KVA  F+II SDS+VK ILINIFGGIM C+ L  GI+ A K ++I+IPL++R+E
Sbjct: 291 GGASQVKVAEGFRIILSDSNVKAILINIFGGIMNCETLASGIIEAAKGLQIHIPLIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+ G +L+ +SGL ++   +L +
Sbjct: 351 GTNVEKGKQLLQQSGLKILITENLTE 376


>gi|322709852|gb|EFZ01427.1| putative succinyl-CoA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 447

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 174/396 (43%), Positives = 242/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y V V KG V  +   A++  K +     V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGVGVPKGAVAKTAEEAKAVAKEIGTEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S        ++++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPHEAEMFAQQMIGHKLITKQTGAGGRLCNAVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    +D   GVT +    +   L   
Sbjct: 154 AILMDRASQSPVIVSSSQGGMDIETVAKESPDAIITTYVDINTGVTDDIARGIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F ++D + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 214 EQCVEDAKDTIQKLYKIFLERDSTQIEINPLSETNDHQVLCMDAKFGFDDNADFRQKEVF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+ED  E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 EWRDTSQEDPDEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 334 GGATPAAIQEAFELITSDPKVTAIFVNIFGGIVRCDHIATGLIKTVENLNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+  +++I ESG+ + +  DL  AA+K V   K
Sbjct: 394 GTNVEQAHKIINESGMKIFSIDDLQSAAEKSVQLSK 429


>gi|312888782|ref|ZP_07748345.1| succinyl-CoA synthetase, beta subunit [Mucilaginibacter paludis DSM
           18603]
 gi|311298657|gb|EFQ75763.1| succinyl-CoA synthetase, beta subunit [Mucilaginibacter paludis DSM
           18603]
          Length = 397

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 184/401 (45%), Positives = 247/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ KA+L+ + V + +G+V  +V  A  A K L         VVK+QIHA     
Sbjct: 1   MNIHEYQGKAILKSFGVRIQEGIVADNVEQAVEAAKKLKEDFGSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  ++  V      ILG  L+T QTGP G  V+ V V       G
Sbjct: 56  -----GGRGKGGGVKLARNIDEVKEKAGAILGMQLVTPQTGPEGKLVSKVLVAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+ +    
Sbjct: 111 ATETKEFYMSVLLDRAAGRNIIMYSTEGGMDIEEVAEHTPHLIFKEEIDPKVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+   D ++ EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGDAFKDMVKFVAALYKAYDATDSAMFEINPVLKTSDNKILAVDAKVNLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   LRD +EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDFAALRDTAEEDPMEVEASRSNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V AAF II  D +VK ILINIFGGI+RCD + +G++ A  E+  
Sbjct: 291 EPANFLDVGGTANAQTVKAAFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYNEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N +   +LI ESGL V +AI L +AA +I
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLQVKSAILLKEAADRI 391


>gi|21243962|ref|NP_643544.1| succinyl-CoA synthetase subunit beta [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|24212434|sp|Q8PHL5|SUCC_XANAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21109574|gb|AAM38080.1| succinyl-CoA synthetase beta subunit [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 389

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|46138741|ref|XP_391061.1| SUCB_NEUCR Probable succinyl-CoA ligase [GDP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, beta
           chain) (SCS-beta) [Gibberella zeae PH-1]
          Length = 445

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 242/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V +G V  S   A+   + +     V+K+Q+ AGGRGKG F 
Sbjct: 35  LSIHEYLSADLLRQYGIGVPQGSVAKSAKEAKEIAEKIGNDDMVIKAQVLAGGRGKGTFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 95  N---GLKGGVRVIYSPHEAEMFAEQMIGHKLVTKQTGAGGRLCNSVYICERKFARREFYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    ID  +GVT E    +   L   
Sbjct: 152 AILMDRQNQCPVIVSSSQGGMDIEAVAKDTPDAINTNYIDINVGVTDETAREIATKLGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 212 EQCIEDAKDTIQKLYKIFREKDSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQKEVF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED  E+ A + NL++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 272 EWRDTTQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 332 GGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIARLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+  ++LI +SGL + +  DL  AA+K V   K
Sbjct: 392 GTNVEKAHQLINDSGLKIFSIDDLQTAAEKSVQLSK 427


>gi|307178345|gb|EFN67099.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Camponotus floridanus]
          Length = 449

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 184/389 (47%), Positives = 242/389 (62%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYSLLNEAGVPTPKFGVAKTADEAAKLAANLKTKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                +  GV++  + +   S    +LG  LITKQTG  G   N V V       +E YL
Sbjct: 98  ---GTNVSGVKMCETPEEAKSLASHMLGKLLITKQTGEAGRICNAVMVTQRMFPRKEYYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E    +   L L 
Sbjct: 155 AVMMERAFGGPVIIASSQGGVNIEEVAATNPNAIMYEPIDINKGITKEQAERIITKLGLD 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++  NLY+ F  KD  LLE+NPL    NG    LD K  FDDNA +R  ++ 
Sbjct: 215 -NVKDYISNIILNLYQMFLKKDALLLEVNPLAEDINGNYFALDCKCRFDDNAEFRQKELF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED +E+EA + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 274 SLRDWSQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 334 GGASASAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA +GL ++   DLD+AA+
Sbjct: 394 GTNVDEAKALIANAGLKIVPIDDLDEAAR 422


>gi|296412464|ref|XP_002835944.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629741|emb|CAZ80101.1| unnamed protein product [Tuber melanosporum]
          Length = 442

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 240/396 (60%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY A  LL+ Y V V  G    +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 32  LSIHEYLAANLLKSYGVGVPGGAFAKTAEEAEAVAKDIGGEDMVIKAQVLAGGRGKGTFD 91

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTGP G     VY+ +     RE YL
Sbjct: 92  N---GLKGGVRVIFSPAEAKFFASQMIGQKLITKQTGPGGKLCTGVYICERKFARREFYL 148

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P  I    ID   GVT E    +   L   
Sbjct: 149 AILMDRATQGPIIVSSSQGGMDIEGVAKEDPDAIVTTPIDIHKGVTDEVATKVATSLGFS 208

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +      NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 209 EQCIPEAVQTIKNLYKVFVEKDATQIEINPLSETNDHKVLAMDAKMGFDDNADFRQEEIF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLD G
Sbjct: 269 SWRDKTQEDPDEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDCG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++IT+D  V  I +NIFGGI+RCD + KG+++ V+ + + IP+V RL+
Sbjct: 329 GGATAQAIERAFQLITNDPKVTAIFVNIFGGIVRCDAIAKGLIATVENMNLRIPIVARLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+    RLI  SGL + +  DL DAA+K V   K
Sbjct: 389 GTNMQEAQRLIDGSGLKIFSFEDLQDAAEKAVQFSK 424


>gi|58581216|ref|YP_200232.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623133|ref|YP_450505.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|188575735|ref|YP_001912664.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75435994|sp|Q5H2H4|SUCC_XANOR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123522578|sp|Q2P5E6|SUCC_XANOM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734999|sp|B2ST87|SUCC_XANOP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58425810|gb|AAW74847.1| succinyl-CoA synthetase beta subunit [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367073|dbj|BAE68231.1| succinyl-CoA synthetase beta subunit [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|188520187|gb|ACD58132.1| succinyl-CoA synthetase beta chain [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 389

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|289662934|ref|ZP_06484515.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667062|ref|ZP_06488137.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 389

 Score =  326 bits (835), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLI 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|327356071|gb|EGE84928.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis ATCC
           18188]
          Length = 444

 Score =  326 bits (835), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 243/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAGQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P+ I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIESVAKETPEAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+   + LI ESGL + +  DL +AA+K V   K
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSK 426


>gi|225681391|gb|EEH19675.1| succinyl-CoA ligase beta-chain [Paracoccidioides brasiliensis Pb03]
 gi|226288516|gb|EEH44028.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb18]
          Length = 444

 Score =  326 bits (835), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V + KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGIPKGEVARTAEEAEAVAKQIGVDDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAAQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGG+DIE VAK+ P  I    ID  +GVT +  A++   L   
Sbjct: 151 AILMDRKSQAPVIVSSSQGGVDIEGVAKESPDAITTTHIDINVGVTDQIAANIARDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKDTIQKLYKVFMEKDATQIEINPLCETTDHQVLAMDAKFGFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDPDELKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL +AA+K V   K
Sbjct: 391 GTNMEQAHKLINDSGLKIFSIEDLQNAAEKSVQFSK 426


>gi|83775290|dbj|BAE65412.1| unnamed protein product [Aspergillus oryzae]
          Length = 460

 Score =  325 bits (834), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 177/413 (42%), Positives = 249/413 (60%), Gaps = 20/413 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  LL+ Y V + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEHLSAKLLKSYGVGMPKGEVAYSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRQSQSPVIVASSQGGMDIEAVAKETPEAIITTPIDIKVGVTDEIAGKIATELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCITEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGC-----------------MVNGAGLAMATM 283
             RD ++ED+ E++A +H L++I LDG+IGC                 +VNGAGLAMATM
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLGKNGNGLLVSSMLITDLVNGAGLAMATM 329

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DIIKL GG PANFLDVGGGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G++
Sbjct: 330 DIIKLNGGNPANFLDVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLI 389

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + V E+ +  P+V RL+G N++  ++L+ ESGL + +  DL +AA+K V   K
Sbjct: 390 NVVNEMGLRTPIVARLQGTNMEQAHKLLNESGLKIFSIEDLQNAAEKSVQFSK 442


>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]
          Length = 1647

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 177/398 (44%), Positives = 251/398 (63%), Gaps = 4/398 (1%)

Query: 1    MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            +N+ EYQ+K LLR   V V    ++  +    SA++ L    YV+K+QI AGGRGKG F 
Sbjct: 1253 LNLLEYQSKELLRDCGVSVQNFAIVDDLTKTNSALEKLHEGEYVIKAQILAGGRGKGWFD 1312

Query: 61   ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  KGGV +     +V + ++ +LG  LITKQT   G  V  + + +  DI RE Y+
Sbjct: 1313 N---GFKGGVHLTRDRNAVSNYVKNMLGHRLITKQTSKDGIPVQKIMIAESVDIARETYV 1369

Query: 121  SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +L+DR       IAS  GGMDIE VA+  P++I  + +D   G+       +   L   
Sbjct: 1370 CILMDRAHNGPVLIASPAGGMDIETVAEKNPEQIKTVPLDIYYGINDAIAKDVSIFLGFT 1429

Query: 181  GQARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                +D       NL+K F D D   +EINPL+  K+ ++  +D+KI+FDDNA +R  D+
Sbjct: 1430 DPDILDKAIYELKNLWKLFVDIDALQVEINPLVETKDKQVIAVDAKIAFDDNAQFRQQDL 1489

Query: 240  QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              L DV+E+D RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLDV
Sbjct: 1490 FALEDVTEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDV 1549

Query: 300  GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
            GG   +D+V  AF+I++ D  VK I +N+FGGI+ C  + KGI++A + + + IPLV+RL
Sbjct: 1550 GGNVKEDQVFQAFRILSEDPKVKAIFVNVFGGIVNCATIAKGIIAASRNLGLQIPLVVRL 1609

Query: 360  EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            EG NV    +++AESGL ++TA +LD+AA+K V +VK 
Sbjct: 1610 EGTNVTEAKKVLAESGLPILTANNLDEAAKKAVISVKA 1647


>gi|296818131|ref|XP_002849402.1| succinyl-CoA ligase beta-chain [Arthroderma otae CBS 113480]
 gi|238839855|gb|EEQ29517.1| succinyl-CoA ligase beta-chain [Arthroderma otae CBS 113480]
          Length = 446

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGDEAEAIAKKIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    I+   GVT E    +   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDAITTTPINIHTGVTDEIARDIATGLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 EQCIPEAMETIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  + LI+ESGL + +  DL  AA+K V   K
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSK 426


>gi|261878942|ref|ZP_06005369.1| succinyl-CoA ligase subunit beta [Prevotella bergensis DSM 17361]
 gi|270334452|gb|EFA45238.1| succinyl-CoA ligase subunit beta [Prevotella bergensis DSM 17361]
          Length = 379

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 181/396 (45%), Positives = 249/396 (62%), Gaps = 27/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKA   +Y VPV + VV  +   A  A + L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKAFFAQYGVPVDRSVVCKTPDEAVEAYEKLGVDKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S   + S    ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGTSAAEIRSRAEAILGMNI-------KGFTVDRVLVGEAVDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+LVDR S     + S +GGMDIE+VA++ P+KI K++IDPL+G+T     E    L D 
Sbjct: 104 SILVDRKSKCPLMMLSREGGMDIEQVARETPEKIEKIVIDPLVGMTDFLAREAAFRLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      LF NLY+ F +KD SL EINPL+ +K+G L+ +D+K++FDDNAL+RH
Sbjct: 164 MAQVKQAV----PLFKNLYRLFIEKDASLAEINPLVKLKDGSLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + + E+ +E EAK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVAELFEPTAEERKEHEAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  V  +LINIFGGI RCD + KG+L A K V+ +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDKHVNTVLINIFGGITRCDDVAKGLLEAFKVVETDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RL G N + G +L+  +  +V T+  + DA +K V
Sbjct: 340 IRLTGTNEEEGRKLLEGTQFHVGTS--MADAGRKAV 373


>gi|261187891|ref|XP_002620363.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis SLH14081]
 gi|239593480|gb|EEQ76061.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis SLH14081]
          Length = 444

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 243/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAGQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P+ I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIESVAKETPEAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+   + LI ESGL + +  DL +AA+K V   K
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSK 426


>gi|195389212|ref|XP_002053271.1| GJ23792 [Drosophila virilis]
 gi|194151357|gb|EDW66791.1| GJ23792 [Drosophila virilis]
          Length = 451

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 180/393 (45%), Positives = 243/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + ++P  +  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESSIPTPRFAVAKNGKEAHDIAQKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +S      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVFSPESAEEYATKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++++R       IAS +GG+DIEEVAK+ P+ I    ID   G+T E    + D + L 
Sbjct: 155 SVMMERAFNGPVLIASKEGGVDIEEVAKENPEAIIYEPIDIGKGLTKEQACKIVDKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +  +   +  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GSSADEHIQMLLNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVMCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRSSGLKILARDDLDKAADLAVH 427


>gi|77917863|ref|YP_355678.1| succinyl-CoA synthetase subunit beta [Pelobacter carbinolicus DSM
           2380]
 gi|123575071|sp|Q3A7Y4|SUCC_PELCD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77543946|gb|ABA87508.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pelobacter
           carbinolicus DSM 2380]
          Length = 388

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 168/393 (42%), Positives = 245/393 (62%), Gaps = 11/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK L  +Y +P+ +G +  SV     A +   G   VVK+QIHAGGRGK    
Sbjct: 1   MKLHEYQAKQLFHRYGIPIPEGRLARSVEETGQAARAFAGRC-VVKAQIHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV   +S+    +  + +L  TL+T QTG  G  V  + VE+   + RE+YL
Sbjct: 57  -------GGVARVNSVDQARNIAQRLLQHTLVTAQTGDQGLYVGSLLVEEIVPVAREMYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL +DR +G    IAS  GG+DIE+ A+  P+++ +L IDPL+G+ +     +   L L 
Sbjct: 110 SLTLDRANGRYCLIASPDGGVDIEQTARKTPERVRRLTIDPLVGLRAFHARDIARFLGLD 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY+   +KD SL+EINPL + + GRL  +D+K+S DD+AL+R  ++ 
Sbjct: 170 GPLSAAASKVILSLYRCLLEKDASLVEINPLAVTEEGRLMAMDAKVSIDDSALFRQKEML 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+    E+ A   +++YI +DG IGC+VNGAGLAMAT+D++   GG PANFLDVG
Sbjct: 230 EWLDESQLAPLEVRAAHSDIAYIKMDGCIGCLVNGAGLAMATLDMLSECGGQPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQDKV  AF+I+  D +V+G+L+NIFGGIMRCD++ +G+++A ++V   +P+V+R+ 
Sbjct: 290 GGADQDKVVEAFRILLEDPAVEGVLVNIFGGIMRCDLIAQGLIAAAEQVGCQLPIVVRMA 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           GA  D G  L+ ++ LN+     L  AA  IV 
Sbjct: 350 GARRDEGKHLLQQTQLNISWQDGLAAAATAIVR 382


>gi|78048905|ref|YP_365080.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294625819|ref|ZP_06704436.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666979|ref|ZP_06732208.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325927500|ref|ZP_08188739.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           perforans 91-118]
 gi|123584384|sp|Q3BQ83|SUCC_XANC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78037335|emb|CAJ25080.1| succinyl-CoA synthetase beta subunit [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292599894|gb|EFF44014.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603268|gb|EFF46690.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325542127|gb|EGD13630.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           perforans 91-118]
          Length = 389

 Score =  325 bits (834), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|166713134|ref|ZP_02244341.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 389

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVDVATSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLI 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|115377066|ref|ZP_01464282.1| succinyl-CoA synthetase beta chain [Stigmatella aurantiaca DW4/3-1]
 gi|115365905|gb|EAU64924.1| succinyl-CoA synthetase beta chain [Stigmatella aurantiaca DW4/3-1]
          Length = 308

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 158/306 (51%), Positives = 222/306 (72%)

Query: 91  LITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDY 150
           L T QTGP G  V+ VY+E+G  I +ELYL + +DR +  + F+AS +GG++IEEVA  +
Sbjct: 3   LKTIQTGPEGQTVHKVYIEEGLAIGQELYLGVTLDRATSRITFMASREGGVEIEEVAAQH 62

Query: 151 PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           P+KI +  +DP +G        L   L L G            LYK + + D +L+EINP
Sbjct: 63  PEKILREAVDPAVGFLDFQGRKLAFGLGLSGPTVNKFVQFCSALYKMYTETDAALVEINP 122

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+I+K+G +  LD+K++FD+NAL++H ++   RD++EE+ RE +AK+ +L+YIALDGNIG
Sbjct: 123 LVILKDGGVVALDAKVTFDENALFKHKELLNYRDLAEEEPRETQAKEFDLAYIALDGNIG 182

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
           CMVNGAGLAMATMD IKL GG PANFLDVGGGA ++KV AAFK+I +D +VK +L+NIFG
Sbjct: 183 CMVNGAGLAMATMDTIKLVGGNPANFLDVGGGASKEKVTAAFKLILADPAVKAVLVNIFG 242

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           GIM+CDV+ +GI++A KEV++ +PLV+RLEG NV+ G +L++ SGL +  A +L  AA+K
Sbjct: 243 GIMKCDVIAEGIIAAAKEVQLKVPLVVRLEGTNVEKGKQLLSNSGLAITPADNLRQAAEK 302

Query: 391 IVHAVK 396
            V A+K
Sbjct: 303 AVAAIK 308


>gi|67541673|ref|XP_664604.1| hypothetical protein AN7000.2 [Aspergillus nidulans FGSC A4]
 gi|40742456|gb|EAA61646.1| hypothetical protein AN7000.2 [Aspergillus nidulans FGSC A4]
          Length = 456

 Score =  325 bits (833), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 179/412 (43%), Positives = 248/412 (60%), Gaps = 19/412 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE   K+L     V+K+Q+ AGGRGKG F 
Sbjct: 30  LSIHEYLSANLLKSYGVGVPKGEVARSAEEAEKVAKSLGNDDMVIKAQVLAGGRGKGHFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N V++ +     RE YL
Sbjct: 90  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAGGRLCNAVFIVERKFARREFYL 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK+ P  I    ID  +GVT      + + L   
Sbjct: 147 AVLMDRKTQGPVIVASSQGGMDIEAVAKENPDAIITTPIDINVGVTDAIATKIANELGFS 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYKAF + D + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 207 EQCVDDAKKTIQNLYKAFMETDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCM----------------VNGAGLAMATMD 284
             RD ++ED+ E++A +H L++I LDG+IGC+                VNGAGLAMATMD
Sbjct: 267 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLGVYPRPNDIIAVLTRTVNGAGLAMATMD 326

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
           IIKL GG+PANFLDVGGGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++
Sbjct: 327 IIKLNGGSPANFLDVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLIN 386

Query: 345 AVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            V+E+ +  P+V RL+G N++  ++LI ESGL + +  DL  AA+K V   K
Sbjct: 387 VVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAAEKSVQFSK 438


>gi|307200144|gb|EFN80453.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Harpegnathos saltator]
          Length = 449

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 182/389 (46%), Positives = 244/389 (62%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYSLLNEAGVPTPKFGVAKTPDEAAKLAAGLQSKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                S  GV++  + +   +   ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 98  ---GSSVSGVKMCETPEEAKALAGQMLGKLLITKQTGEAGRICNAVMVTQRMFPRKEYYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E    + + L L+
Sbjct: 155 AVMMERAFGGPVIIASSQGGVNIEEVAATNPGAIMYEPIDINKGITKEQAERITNKLGLE 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    D+  NLY+ F  KD  LLE+NPL    NG    LD K  FDDNA +R  ++ 
Sbjct: 215 -NVKDYISDIIMNLYQMFLKKDALLLEVNPLAEDINGNYFALDCKCRFDDNAEFRQKELF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E++A + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 274 SLRDWTQEDKKEVDAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 334 GGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA +GL ++   DLD+AA+
Sbjct: 394 GTNVDEAKALIANAGLKIVPIDDLDEAAR 422


>gi|325916243|ref|ZP_08178524.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537537|gb|EGD09252.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 389

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 177/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLI 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|254457833|ref|ZP_05071260.1| succinyl-coa synthetase beta chain [Campylobacterales bacterium GD
           1]
 gi|207085226|gb|EDZ62511.1| succinyl-coa synthetase beta chain [Campylobacterales bacterium GD
           1]
          Length = 390

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 177/390 (45%), Positives = 244/390 (62%), Gaps = 16/390 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  KYN+P  KG+++ SV AA  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQAKQIFAKYNIPTPKGIMVESVKAAIEAAEVLGGPIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V S   EILG TL+T QT   G  V  +Y+EDGADI  ELYL
Sbjct: 52  -GGRGLGGGVKLAKSIDEVESLATEILGMTLVTHQTTAEGKLVQKLYIEDGADIKDELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR S M   +AST+GGMDIE VA++ P+KI  + +DP IG        L   L + 
Sbjct: 111 SVVLDRKSEMPLIMASTEGGMDIETVAENTPEKIITIPVDPAIGFQGFHGRQLAFGLGIT 170

Query: 181 GQARIDGGDLF---PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              +I+  ++      L++ + + D  ++EINPL+    G    LD K+ FD++AL R  
Sbjct: 171 D--KIEQKNIIKFAEKLFRLYMENDAEMIEINPLVKTGKGVFLALDGKMGFDNSALGRQP 228

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  +RD++EED+ EIEA ++ LSY+ALDG IGCMVNGAGLAM TMD I   GG PANFL
Sbjct: 229 EIAAMRDLTEEDADEIEAAKYGLSYVALDGEIGCMVNGAGLAMGTMDTINYMGGTPANFL 288

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A+ + VA  F+II  +  VK I +NIFGGI+RCD +  GI+ A K   +N+P+++
Sbjct: 289 DVGGSANAETVAKGFEIILKNPRVKAIFVNIFGGIVRCDRIANGIIEATKLTDVNVPVIV 348

Query: 358 RLEGANVDIGNRLIAESGL-NVITAIDLDD 386
           RL+G N      ++  + + N+I   DL D
Sbjct: 349 RLDGTNAPEAAEILKNANIPNLIVGNDLGD 378


>gi|158292075|ref|XP_313633.4| AGAP004352-PA [Anopheles gambiae str. PEST]
 gi|157017261|gb|EAA09142.4| AGAP004352-PA [Anopheles gambiae str. PEST]
          Length = 423

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 4/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    ++     A+  +K      YVVK+QI AGGRGKG F 
Sbjct: 30  LNLLEYQSKKLLEESGVAIQNFRILEGKKDAD-VLKDFDVNEYVVKAQILAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +  +   VI  + +++G  LITKQT   G  V  V V D  +I+RE YL
Sbjct: 89  N---GFKGGVHITKNRAEVIPLVEKMVGHKLITKQTPKDGILVKKVMVADSINIVRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P +I  + ID   G++ E    +   LE +
Sbjct: 146 SIVMDREHNGPVLIASPDGGMDIEAVAEETPNRIKTIPIDITSGISREQAIDVARFLEFK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D   +EINPL    +GR+  +D+K++FDDNA +R  DI 
Sbjct: 206 GFLVDKAADEITKLYGLFTKVDAVQIEINPLAETDDGRVISVDAKLNFDDNAQFRQKDIF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +E+EA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 266 AMEVHEDTDPKEVEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AF+I+TSD++VK IL+N+FGGI+ C  +  GI++A K + + +PL++RLE
Sbjct: 326 GNVKEDQVLKAFQILTSDTNVKAILVNVFGGIVNCATIANGIVNATKTMNLQVPLIVRLE 385

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV    +++ +SGL + +A DLD+AA+K V +++ V
Sbjct: 386 GTNVQAAKKILEQSGLKIESAHDLDEAAKKAVQSIRTV 423


>gi|154273072|ref|XP_001537388.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Ajellomyces capsulatus NAm1]
 gi|150415900|gb|EDN11244.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Ajellomyces capsulatus NAm1]
          Length = 444

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 174/398 (43%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKTYGVGVPKGEVARTAEEAEAVAKQIDAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P  I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIETVAKETPDAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCLEEAKNTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDPDEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + AAF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRAAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + LI ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSKVV 428


>gi|91095067|ref|XP_972655.1| PREDICTED: similar to succinyl-coa synthetase beta chain [Tribolium
           castaneum]
 gi|270014754|gb|EFA11202.1| hypothetical protein TcasGA2_TC005166 [Tribolium castaneum]
          Length = 414

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 243/393 (61%), Gaps = 5/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLRK  V V    ++     +E          YV+K+QI AGGRGKG F 
Sbjct: 25  LNLLEYQSKHLLRKNGVAVQDFCMVDDKGCSE--FDKFNVKEYVIKAQILAGGRGKGHFT 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V      V   ++++LG  LITKQT   G  V  +   +  +I RE Y+
Sbjct: 83  N---GFKGGVHVTEKRNEVDDIVKKMLGHRLITKQTPKDGIEVKKIMFAESVNIQRETYV 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GG+DIE VA+  P  I  + ID   GVT      + + LE +
Sbjct: 140 CILMDRQKNGPVLIASPAGGVDIEAVAEKTPHLIKNIPIDIHKGVTDSMANEVAEFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +         L++ F   D + LEINPL+   N ++  +D+KI+FDDNA +R  DI 
Sbjct: 200 GPLKGLAAAELKKLWQFFLAVDATQLEINPLVETDNNKVIAVDAKINFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L DV+E D RE+EA ++NL+YI + GNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 260 ALEDVTESDPREVEAAKYNLNYIGMTGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +++V AAF I+TSD +VK IL+N+FGGI+ C  +  GI+ A+K +K+ +PL++RLE
Sbjct: 320 GSVREEQVKAAFNILTSDKNVKCILVNVFGGIVNCATIANGIVGAMKAMKLEVPLIVRLE 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N     R+I +SG+N+ TA +LDDAA+K V 
Sbjct: 380 GTNAAEARRIIKDSGMNIQTAENLDDAAKKAVQ 412


>gi|225555061|gb|EEH03354.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus G186AR]
 gi|240281269|gb|EER44772.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus H143]
 gi|325092238|gb|EGC45548.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus H88]
          Length = 444

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 174/398 (43%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKTYGVGVPKGEVARTAEEAEAVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P  I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIETVAKETPDAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCLEEAKNTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDPDEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + AAF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRAAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + LI ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSKVV 428


>gi|91203544|emb|CAJ71197.1| strongly similar to succinyl CoA-synthetase subunit b [Candidatus
           Kuenenia stuttgartiensis]
          Length = 390

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 180/399 (45%), Positives = 255/399 (63%), Gaps = 16/399 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M I+E+QAK +L+ Y++ V +G V+S+   A +A K + G   VVK+QI AGGRGK    
Sbjct: 1   MRIYEFQAKDILKTYSICVPRGRVVSAADDARTAYKEIGGGKCVVKAQILAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR  +S +   S I  +LGS L T QT      +  V +E+   I +E YL
Sbjct: 58  -------GGVRFVNSSEEAESCISGMLGSRLTTYQTNQESFEIKHVLLEEAVSIQKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+   +  I S +GG+ IE+VAK  P+KIFK  +D   G+    +  + + L + 
Sbjct: 111 AITIDRSLQSLLLIVSAEGGVAIEDVAKKTPEKIFKEPVDLFFGLLPFQLRRITEKLMIS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +L   L+  F +KD  LLEINPL++ +N  L VLD+K+  DDNA++RH +++
Sbjct: 171 AKLSEKVNELIKKLFSVFINKDCLLLEINPLVLTENNELVVLDAKMELDDNAIFRHPELE 230

Query: 241 ELRDVSEED--SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            +  ++E+D    E  AK+H LSYI LDG+IGC+VNGAGLAMATMD IKL GG PANFLD
Sbjct: 231 YI--LAEQDIPPDEALAKKHGLSYIHLDGDIGCLVNGAGLAMATMDSIKLCGGEPANFLD 288

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A  ++V  AFKII SD  VK +LINIFGGIM+CDV+ +GI+  VKE   +IP ++R
Sbjct: 289 VGGDASLEQVTRAFKIILSDRKVKAVLINIFGGIMKCDVIAEGIIRVVKEA--DIPFIVR 346

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           LEG NVD+  +++ +SGL +I+  ++ DAA+  V A KG
Sbjct: 347 LEGTNVDLARKILDDSGLKIISVGNMKDAARFAVKASKG 385


>gi|159466792|ref|XP_001691582.1| succinate-coa ligase beta chain, minor isoform [Chlamydomonas
           reinhardtii]
 gi|158278928|gb|EDP04690.1| succinate-coa ligase beta chain, minor isoform [Chlamydomonas
           reinhardtii]
          Length = 382

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 170/386 (44%), Positives = 251/386 (65%), Gaps = 7/386 (1%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGG 69
           + K+ V V  G+  +++   + A+  +       V+KSQI AGGRG G+F       +GG
Sbjct: 1   MSKFGVNVPPGIPATTLDEVKKAVDQMADEKGEVVIKSQILAGGRGLGKFTN---GLQGG 57

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V +    K+ +   +++LG+TL+TKQTGP G  VN + +     + RE+Y ++L+DR + 
Sbjct: 58  VHIVPKAKA-LELAKQMLGATLVTKQTGPAGKPVNTLLISKKMKLKREMYFAILLDRKTA 116

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               I  ++GG  IE++A+ +P+KI K+ ID  +G+T      + + L + G        
Sbjct: 117 GPMMIGCSEGGTSIEDLAEKFPEKIIKIPIDIRVGITDAQAMQMVEGLRVTGDKAAAAKQ 176

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           +   LY  F   D +++E+NPL    +G L   D+K+ FDDNA YR   I +++D S+ D
Sbjct: 177 IK-ALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQID 235

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
            RE+ A +++L+YI LDG+IGCMVNGAGLAMATMDIIK++GGAPANFLDVGG A++ +V 
Sbjct: 236 PREVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVV 295

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFKI+T D  VK IL+NIFGGIM+CDV+  GI++A K+V + +PLV+RLEG NV  G  
Sbjct: 296 EAFKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKE 355

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAV 395
           ++A SG+ +ITA DLDDAA+K V ++
Sbjct: 356 ILATSGMTIITADDLDDAAKKAVASI 381


>gi|238508772|ref|XP_002385570.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
 gi|220688462|gb|EED44815.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
          Length = 491

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 172/383 (44%), Positives = 240/383 (62%), Gaps = 3/383 (0%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +Y V + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F       KGGVRV 
Sbjct: 94  QYGVGMPKGEVAYSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDN---GLKGGVRVI 150

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S         +++G  LITKQTG  G   N VY+ +     RE YL++L+DR S     
Sbjct: 151 YSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRQSQSPVI 210

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPN 193
           +AS+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L    Q   +  D    
Sbjct: 211 VASSQGGMDIEAVAKETPEAIITTPIDIKVGVTDEIAGKIATELGFSEQCIPEAKDTIQK 270

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++   RD ++ED+ E+
Sbjct: 271 LYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQKEVFSWRDTTQEDADEV 330

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           +A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVGGGA    + +AF+
Sbjct: 331 KAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVGGGATPAAIKSAFE 390

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           +ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+G N++  ++L+ E
Sbjct: 391 LITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVNEMGLRTPIVARLQGTNMEQAHKLLNE 450

Query: 374 SGLNVITAIDLDDAAQKIVHAVK 396
           SGL + +  DL +AA+K V   K
Sbjct: 451 SGLKIFSIEDLQNAAEKSVQFSK 473


>gi|292669154|ref|ZP_06602580.1| succinyl-CoA ligase subunit beta [Selenomonas noxia ATCC 43541]
 gi|292649206|gb|EFF67178.1| succinyl-CoA ligase subunit beta [Selenomonas noxia ATCC 43541]
          Length = 396

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 173/401 (43%), Positives = 250/401 (62%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   SV  A +  + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQILREFGVNVPNGLPAFSVQEAVTNAEKLDTPVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +  +E+LG  L+T QTGP G  V  + +E+ + I +E YL
Sbjct: 58  -------GGVKLAKSAEEVRAVAQELLGKVLVTHQTGPEGKVVERLLIEEASKIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 111 SFIIDRHTASVVMMGSEEGGVEIEKVAAETPEKIIKEYIDPVIGLAGFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A          LY AF DKD S LEINPL++ ++ ++ VLD+K++FDD+AL+RH DI 
Sbjct: 171 ETAIRRAVSTMQKLYTAFVDKDCSQLEINPLVLTEDDKIVVLDAKLNFDDSALFRHSDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +E  A    L+Y+ L G++ CMVNGAGLAMAT+D++K YGG PANFLDVG
Sbjct: 231 MLRDESEEDPKERIAAAAGLNYVNLGGDVACMVNGAGLAMATVDMLKFYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF I+      KGI +NI GGI RCD + KGI+ A   +      + +P+
Sbjct: 291 GDSAPEKIAKAFSIMLEGGQAKGIFVNIMGGINRCDNIAKGIIEAAHIISKDGSSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG+ V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 351 VVRLEGSMVEEGREILRNTPITNVFAAPTMEGGAEQIVKLV 391


>gi|194741642|ref|XP_001953298.1| GF17693 [Drosophila ananassae]
 gi|190626357|gb|EDV41881.1| GF17693 [Drosophila ananassae]
          Length = 513

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 181/393 (46%), Positives = 240/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNESKIPTPRFAVAKNGKEAHDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    K+      +++   LITKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPKTAEEISSKMIDQLLITKQTGAAGRLCKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P+ I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAATSPEAILYEPIDIDTGLTSEQAQKIIQKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      ++  NLYK F +KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GEGEEQHVEMLLNLYKLFVNKDALLVEINPYAEDALTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVH 427


>gi|193713938|ref|XP_001946802.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 424

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 172/396 (43%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E  +K LL ++ V V K  ++ +     + +K+     YV+K+Q+ AGGRGKG F 
Sbjct: 31  LNLLECHSKDLLNQHGVAVQKFKIVENADETNNLLKSFDVDEYVLKAQVLAGGRGKGHFN 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V      +   ++ +LG  LITKQT   G  V  V V +  DI RE Y 
Sbjct: 91  N---GFKGGVHVTKERTKIYDLLKNMLGYKLITKQTPKDGILVTKVMVAESVDIKRETYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR+      IAS  GGMDIE++A + P+ I K+ ID   G++      +   L   
Sbjct: 148 CILMDRSQNGPVLIASPAGGMDIEDIAINSPELIKKIPIDIFEGISDTVALDVAKFLNFN 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    L++ F   D   +EINPL+   + ++  +D+KI FDDN+ +RH +I 
Sbjct: 208 EPLASVAANEIKRLWEFFLSVDAVQIEINPLVETLDNKVVCVDAKIQFDDNSQFRHKEIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + SE D RE+ A +HNLSYI +DGNIGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 268 ELDETSESDPREVMANKHNLSYIGMDGNIGCLVNGAGLAMATMDIIKLRGGEPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  ++++V  AFK++T DSSVK IL+N+FGGI+ C  + KG+++A +++ + +PLV+RLE
Sbjct: 328 GNVNENQVYEAFKLLTLDSSVKAILVNVFGGIVNCATIAKGLINASRKLDLQVPLVVRLE 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G +L+ ESGL +  A DLD+AA+K + ++K
Sbjct: 388 GTNVSAGKKLLEESGLPIEFASDLDEAAKKAISSLK 423


>gi|313207057|ref|YP_004046234.1| succinyl-CoA synthetase, beta subunit [Riemerella anatipestifer DSM
           15868]
 gi|312446373|gb|ADQ82728.1| succinyl-CoA synthetase, beta subunit [Riemerella anatipestifer DSM
           15868]
 gi|315022549|gb|EFT35576.1| succinyl-CoA synthetase subunit beta [Riemerella anatipestifer
           RA-YM]
 gi|325335506|gb|ADZ11780.1| Succinyl-CoA synthetase, beta subunit [Riemerella anatipestifer
           RA-GD]
          Length = 396

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 175/401 (43%), Positives = 251/401 (62%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           MN+HEYQ+K +L KY V V +G+V S+V  A+ A + L        +VVK+Q+HA     
Sbjct: 1   MNLHEYQSKEILAKYGVRVQRGIVASTVEEAKKAAEQLSAETGTKAWVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV+   +++ +  + R I+G  L+T QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKFSPNMEKLEENARNIIGMQLVTPQTSAEGKKVHSVLIAEDMYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L+DR  G    + ST+GGMDIE+VA++ P  I    +DP +G+      
Sbjct: 111 DSEPKEYYVSVLLDRAKGKNMIVYSTEGGMDIEQVAEETPHLIHNEEVDPALGLQPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G+A  D       LY A+   D SL EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLEGEAFKDFVKFITALYNAYVGIDASLFEINPVLKTSDNKIAAVDAKVTLDNN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+ ELRD  EED  E+EA +  L+++ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALFRHKDLAELRDKREEDPTEVEAGEAGLNFVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD ++V  AF II  D +VK ILINIFGGI+RCD + +G++ A K   +
Sbjct: 291 NPANFLDVGGTADAERVEKAFGIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKSFGE 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +PL++RL+G N +   RLI ESGL V +AI L++AA K+
Sbjct: 351 LPVPLIVRLQGTNAEEAKRLIDESGLPVHSAITLEEAANKV 391


>gi|195054872|ref|XP_001994347.1| GH23962 [Drosophila grimshawi]
 gi|193896217|gb|EDV95083.1| GH23962 [Drosophila grimshawi]
          Length = 451

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 241/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + N+P  +  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESNIPTPRFAVAKNGKEAHDIAQNLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV     S      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVFDADSAEQYSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID + G+T E    + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKENPDAILYEPIDIVEGLTKEQACRMIEKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  ++  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GAGADEHIEMLMNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 CMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVMCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRSSGLKILARDDLDKAADMAVH 427


>gi|195445339|ref|XP_002070282.1| GK11971 [Drosophila willistoni]
 gi|194166367|gb|EDW81268.1| GK11971 [Drosophila willistoni]
          Length = 524

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 180/393 (45%), Positives = 241/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + ++P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESDIPTPRFAVAKNGKEAHDIATKLKTDNLVLKAQVLAGGRGKGAFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    +S      +++   L+T+QTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPESAEQITSKMVDQLLVTRQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID   G+T+E  A + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKESPDAIIYEPIDITKGLTNEQAAKIVNKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   +  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDNADEHVQMLLNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SLRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRSSGLKILARDDLDKAADLAVH 427


>gi|325186785|emb|CCA21331.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 439

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 255/396 (64%), Gaps = 7/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           +N+HEYQ+  ++++Y + + +G+   +   A++A K + G       V+K+Q   GGRG 
Sbjct: 26  LNLHEYQSMDIMKEYGIRIPQGLPAQTPEEADNAYKQIVGNKSDADVVIKAQALTGGRGL 85

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F       KGGV + +  +   +   +++G TL+TKQTG  G +V  V + +   + R
Sbjct: 86  GHFTN---GFKGGVHMCTKPEDAKTFASKMIGHTLVTKQTGERGIQVAKVLLMERVYMRR 142

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y S+L+DR S     +AS  GG  IE+VA   P+ IFK +ID   G T + V  L + 
Sbjct: 143 EMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFKQVIDIQTGPTEDQVDFLVEK 202

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L    +++    ++  NLY  F   D +L+EINPL     G +   D+KI+FDDNA +RH
Sbjct: 203 LGCNAESKSKMAEMIRNLYNMFIGVDATLVEINPLAETPAGDVLACDAKINFDDNAAFRH 262

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI   RD ++ED RE+EA   +L+YI LDGNIGC+VNGAGLAMATMDII L+GG+PANF
Sbjct: 263 KDIFAKRDKTQEDPREVEASAFDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANF 322

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA + +V  AF+I+ +D  VK IL+NIFGGIMRCDV+  GI++A +++ +  P++
Sbjct: 323 LDVGGGATEAQVKKAFEILNADDQVKSILVNIFGGIMRCDVIAAGIIAAARDLDLEKPII 382

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RL+G NV+   +LIA+SG  +I A +LDDAAQK V
Sbjct: 383 VRLQGTNVEKARQLIADSGFKMIVADNLDDAAQKAV 418


>gi|167518784|ref|XP_001743732.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777694|gb|EDQ91310.1| predicted protein [Monosiga brevicollis MX1]
          Length = 455

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 172/375 (45%), Positives = 237/375 (63%), Gaps = 3/375 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE  +  LLR ++V V KG    S   A    K +     V+K+Q+ AGGRGKG F 
Sbjct: 29  LHLHEVDSMDLLRSFDVSVGKGDRAFSSDEAVQVAKQMSTDKVVIKAQVLAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV V      + S    ++G  LITKQT   G   N V + +  DI +E Y 
Sbjct: 89  N---GFQGGVHVVKGEDEIRSAADNMIGHRLITKQTDEHGRPCNMVQIAECMDIDKEFYF 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR+ G    + S+QGGMDIE VA+  P  I K+ +D   G++++    +   +   
Sbjct: 146 ALLMDRSMGGPCIVGSSQGGMDIEAVAEATPDAIIKVPVDIKEGLSTDKAIQVAKDMGFA 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       NLY  F +KD +L+EINPL+  K G +  LD+K++FDDNA +R  D+ 
Sbjct: 206 DDIAPKAAQEMINLYTLFLEKDCTLVEINPLVQTKGGDVMCLDAKVNFDDNAGFRQKDVF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RDVS+E++ ++EA +++L+YI LDG IGC+VNGAGLAMATMDII+LYGG PANFLDVG
Sbjct: 266 EKRDVSQENAADVEAAKYDLNYIDLDGTIGCLVNGAGLAMATMDIIQLYGGRPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V AAFK+ITSD SV  IL+NIFGGIMRCDV+ +GI+ A  E+ +N+P+V+RL+
Sbjct: 326 GGATAEQVTAAFKLITSDPSVSAILVNIFGGIMRCDVIAEGIIEAASELHLNVPIVVRLQ 385

Query: 361 GANVDIGNRLIAESG 375
           G        LIAESG
Sbjct: 386 GTRKAEAKALIAESG 400


>gi|154174047|ref|YP_001408277.1| succinyl-CoA synthetase subunit beta [Campylobacter curvus 525.92]
 gi|189046900|sp|A7GYI5|SUCC_CAMC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|112802755|gb|EAU00099.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Campylobacter curvus 525.92]
          Length = 390

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 176/400 (44%), Positives = 249/400 (62%), Gaps = 15/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L++Y V VAKG V  ++  A   +  L G ++ +K+QIHAGGRG     
Sbjct: 1   MNIHEFQAKEILKRYGVNVAKGAVAENLEQASEILNDLEGEIFALKAQIHAGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS +  I    ++LG TLIT QT   G  V  +Y+E+G +  +E+YL
Sbjct: 58  -------GGVKIASSREQAIQFASKLLGMTLITPQTPKNGILVRKIYIEEGLNFKQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL  DR S  ++ I S  GG+ IEE AK  P  I  + IDP IG+       L + L++ 
Sbjct: 111 SLAFDRNSEKISLIVSKDGGVSIEETAKQNPHLIKTISIDPQIGLCGFHTKELINFLQID 170

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               +++D   L  NLYK +  KD +L+EINPL++ ++     LD+K+SFDD+AL+RH D
Sbjct: 171 KILWSKLD--TLLQNLYKIYIFKDANLIEINPLVLTQDDEFYALDAKMSFDDSALFRHED 228

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I+ L D ++ D+ E EAK   L+YI L+G++GC+VNGAGLAMATMDIIK  GG  ANFLD
Sbjct: 229 IRALNDETQTDTSENEAKAQRLNYIKLEGSVGCVVNGAGLAMATMDIIKELGGEAANFLD 288

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A  + VA AF++I +D  VK I +NIFGGI+RCD +  GI+ A +   + +P+V+R
Sbjct: 289 VGGAATGEGVAKAFRLILNDRRVKVIFVNIFGGIVRCDRIAAGIIEACQSTPLGVPVVVR 348

Query: 359 LEGANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAVKG 397
           L+G N      ++  S L  + T+ DL + A+  V   KG
Sbjct: 349 LDGTNAKEALDMLKNSALKGLHTSDDLFEGARLAVMLAKG 388


>gi|327402507|ref|YP_004343345.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Fluviicola
           taffensis DSM 16823]
 gi|327318015|gb|AEA42507.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Fluviicola
           taffensis DSM 16823]
          Length = 403

 Score =  322 bits (824), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 177/401 (44%), Positives = 247/401 (61%), Gaps = 13/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K++L+KY V + +GVV+  V  A +A K L        YVVK+QIHAGGRGK
Sbjct: 1   MNLHEYQGKSILQKYGVAIQRGVVVEKVEDAIAAAKKLTEETGTGWYVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G  +E  +    GV +   +  V   ++ ILG  L T QT   G  V+ V + +     G
Sbjct: 61  GVVEETGSH---GVVLAKGIDQVEEKVKGILGGHLETAQTNGVGKLVSKVLLAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              + E Y+S+L+DR  G    + ST+GGMDIE VA D P  IFK  IDP +G+      
Sbjct: 118 EAEVEEFYMSVLLDRERGRNTIMYSTEGGMDIETVAHDTPHLIFKEEIDPRVGIQGFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A         NLY A+   D ++ EINP++   + ++  +D+K++ D N
Sbjct: 178 KIAFNLGLSGEAFKQMTKFVVNLYNAYEGCDAAMFEINPVLKTSDNKIIAVDAKVTLDGN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
            LYRH D   +RD  EED  ++EA    L+++ LDGN+ CMVNGAGLAMATMDIIK  GG
Sbjct: 238 GLYRHPDYAAMRDTMEEDPLDVEADAAGLNFVKLDGNVACMVNGAGLAMATMDIIKYSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
           +PANFLDVGG A+ ++V  AF II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 298 SPANFLDVGGTANAERVEKAFHIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKSIGN 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N     ++I +SGLNV +A+ L +AA K+
Sbjct: 358 IPVPIIVRLQGTNAVEAKKIIDDSGLNVHSAVLLQEAADKV 398


>gi|325104471|ref|YP_004274125.1| succinyl-CoA synthetase, beta subunit [Pedobacter saltans DSM
           12145]
 gi|324973319|gb|ADY52303.1| succinyl-CoA synthetase, beta subunit [Pedobacter saltans DSM
           12145]
          Length = 396

 Score =  322 bits (824), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 178/398 (44%), Positives = 248/398 (62%), Gaps = 20/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V+ +    V AA+   +       VVK+QIHA     
Sbjct: 1   MNIHEYQGKEILKSFGVRVQEGIVVDTPEEAVEAAKKMKEDFGSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V     +I+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKQRATDIIGMQLVTPQTGPEGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R++G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ESETKEFYVSVLLNRSTGRNIIMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L   G A  +       LYKA+   D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGTSGNAFKEMVKFITALYKAYDAIDASMFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH DI  +RD++EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALYRHPDIAAMRDITEEDPTEVEAGESNLNYVKLDGNVGCMVNGAGLAMATMDIIKLAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V AAF II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 DPANFLDVGGTANAQTVKAAFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGD 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           I +P+++RL+G N +   +LI ESGL V +AI L +AA
Sbjct: 351 IKVPIIVRLQGTNAEEAKKLIDESGLKVYSAILLKEAA 388


>gi|157110382|ref|XP_001651078.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|157110384|ref|XP_001651079.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108878749|gb|EAT42974.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108878750|gb|EAT42975.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 421

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/393 (45%), Positives = 248/393 (63%), Gaps = 6/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    V+      ES ++      YVVK+QI AGGRGKG F 
Sbjct: 30  LNLLEYQSKKLLAESGVAIQAFRVLEG-KKDESVLQDFNVNEYVVKAQILAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +      VI  + +++G  LITKQT   G  V  V V D  +I+RE YL
Sbjct: 89  N---GFKGGVHITKDRSQVIPLVEKMVGHRLITKQTPKDGIMVKKVMVADSINIVRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P KI  + +  + G+T      +   LE +
Sbjct: 146 SIVMDREHNGPVLIASPAGGMDIEAVAEETPDKIKTIPVSVVDGITHAQAEEVARFLEFK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL    +GR+  +D+K++FDDNA +R  DI 
Sbjct: 206 GNLVQKAAAEIEKLYHLFVKVDATQIEINPLAETDDGRVISVDAKLNFDDNAQFRQKDIF 265

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            + DV E+ D +EIEA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GG+PANFLDV
Sbjct: 266 AM-DVHEDTDPKEIEAHKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDV 324

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   +++V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI++A K + + +PLV+RL
Sbjct: 325 GGNVKEEQVLKAFQILTSDPNVKAILVNVFGGIVNCATIANGIVNATKTIGLKVPLVVRL 384

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           EG NVD   +++ ESGL + +A DLD+AA+K V
Sbjct: 385 EGTNVDAAKKILKESGLKIESAHDLDEAAKKAV 417


>gi|72171322|ref|XP_786521.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115697859|ref|XP_001203128.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 426

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 250/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+++Y+V V K +V      A    K L     V+K+QI AGGRGKG F 
Sbjct: 34  LNLQEYQSKKLMQQYDVNVQKFMVADDAQQAVQQGKDLDVREIVLKAQILAGGRGKGTFT 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +  +   +   + +++G+ L TKQT   G  V  V V +  DI RE YL
Sbjct: 94  ---SGLKGGVHLTKNPNDLGPLVEQMIGAKLTTKQTPKDGVLVKKVMVAEALDIERETYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       I S  GG+DIEEV++  P+ I+K+ ID  IG+T E   ++   L+ +
Sbjct: 151 AILMDRGMMGPVLIGSPAGGVDIEEVSEKTPELIYKVPIDITIGITDEQALTMAKNLDFK 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D   NLY+ F   D + +E+NP     +GR+   D+KI+FDDNA +R  ++ 
Sbjct: 211 GDLIRVAADQIKNLYELFLGVDATQVEVNPFGETDDGRVVCFDAKINFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D++E D +E+ A +HNL+YI++DGNIGC+VNGAGLAMATMDIIKL+GG PANFLD G
Sbjct: 271 AMDDMTEADPKEVLAAEHNLNYISMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDCG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK+I+SD +VK IL+N+FGGI+ C ++  GI SA + + + +PLV+RL 
Sbjct: 331 GGVGEGQVFEAFKLISSDENVKAILVNVFGGIVDCSIIANGITSACRGMDLKVPLVVRLA 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV+    ++ ESGL +  A DL+DAA+K V
Sbjct: 391 GFNVEKATSILHESGLPIKIAADLEDAAKKAV 422


>gi|32491166|ref|NP_871420.1| hypothetical protein WGLp417 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166373|dbj|BAC24563.1| sucC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 396

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 172/392 (43%), Positives = 237/392 (60%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  KY +P+ KG  I  +   E  I  L    +V+K QIHAGGRGK    
Sbjct: 1   MNLHEYQAKKLFNKYEIPIPKGYCIKELDEIEKTISNLSTGPWVIKCQIHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S K +    ++ LG+ LIT QT   G +VN + +E    I +ELYL
Sbjct: 58  -------GGIKITNSKKEIHEFAKKWLGNKLITYQTDKNGQKVNYLLIEKKTIIKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +++R    +  I+S  GG+DIE + K     I+K +++    +       +   L LQ
Sbjct: 111 SFVINRKKSSIMLISSDSGGVDIENIFKKKSNNIYKEILESCYLIQDFQSRKIAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   L   F + D++ LEINP++I     L  LD KI  DDNA+YR+  + 
Sbjct: 171 GNQINQFVKICNKLSLLFLENDLTTLEINPIVIDDKNNLICLDGKIIIDDNAIYRNYSLY 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ D RE+ A   NL+YI LDGNIGCMVNGAGLAM TMD+IK +GG PANFLDVG
Sbjct: 231 EEHDNSQLDKREVYAANDNLNYIPLDGNIGCMVNGAGLAMGTMDLIKFHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    +KV  AFKII  DS+VK IL+NIFGGI+RCD++  GI+++V  +KI IP+++RLE
Sbjct: 291 GNTTVEKVEKAFKIILLDSNVKVILVNIFGGIVRCDLISNGIINSVINLKIKIPIIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G N   G + + +S LN+I A  L+DA +K +
Sbjct: 351 GNNSINGIKALKKSNLNIIAANSLNDAVKKAI 382


>gi|72015065|ref|XP_786753.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115975381|ref|XP_001177158.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 452

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 253/394 (64%), Gaps = 4/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY    LL +  VP+ +  V ++   A    K+L     VVK+Q+ AGGRGKG F 
Sbjct: 41  LSIHEYMGYDLLEEAGVPIPRAEVATTAQRAYEIAKSLGSGDVVVKAQVLAGGRGKGAFT 100

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S + V     +++G+ L+TKQTG  G   N V V +   + RE Y 
Sbjct: 101 ---SGLKGGVKLAFSPEEVKDLASQMIGNKLVTKQTGEGGRICNSVLVCERMYVRREYYF 157

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       + S+QGG++IE+VA + P+ I K  ID   G+       +  ++   
Sbjct: 158 AITMERAFNGPVLVGSSQGGVNIEDVAAENPEAIIKEPIDIEAGIQRSQAEKMAKLMGFP 217

Query: 181 GQARIDGGDLFPNLYKA-FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A     + F NLY   F   D ++LEINPL+    G++  +DSKI+FDDNAL+R   I
Sbjct: 218 DRAVEQAAETFMNLYNNIFIKYDATMLEINPLVEDSEGQVLCMDSKINFDDNALFRQKKI 277

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD S+ED RE+ A ++NL+YI LDG+IGC+VNGAGLAM+TMDIIKL+GG PANFLDV
Sbjct: 278 HDLRDWSQEDEREVSAAEYNLNYIGLDGDIGCLVNGAGLAMSTMDIIKLHGGTPANFLDV 337

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  D+V  AFK+ITSDS V+ I++NIFGGIM+CD++ +GI++A  E+ + +P+V+RL
Sbjct: 338 GGGATADQVKQAFKLITSDSKVQAIMVNIFGGIMQCDIIAQGIIAAANELNLKVPIVVRL 397

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +G  VD    +IA S L ++   DLD+AA+ +V 
Sbjct: 398 QGTMVDEAKAIIAHSDLRILACDDLDEAAKMVVR 431


>gi|126131926|ref|XP_001382488.1| succinate--CoA ligase (GDP-forming) beta chain (LSC2)
           [Scheffersomyces stipitis CBS 6054]
 gi|126094313|gb|ABN64459.1| succinate--CoA ligase (GDP-forming) beta chain (LSC2)
           [Scheffersomyces stipitis CBS 6054]
          Length = 414

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 173/395 (43%), Positives = 242/395 (61%), Gaps = 7/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y V V KG   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLEQYGVGVPKGYAATTAEGAFDAAKKLGTTELVIKAQALTGGRGKGHF- 78

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++ SS +       ++LG  LITKQTG  G  V  VY+ +  D L E 
Sbjct: 79  ----DSGLQGGVKLISSPEEAKDLAAQMLGHKLITKQTGAAGKEVTAVYIVERRDALTEA 134

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++L DR +     +AS+QGGMDIE VA + P+ I    +D   GVT +    +  +L 
Sbjct: 135 YVAILNDRAAQTPIIVASSQGGMDIEGVAAETPEAIHTFKVDLKEGVTDKLATEVASVLG 194

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               A  +      NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  +
Sbjct: 195 YTDAAIPEAAKAVQNLYKVFEEKDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEE 254

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD ++ED  E+EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD
Sbjct: 255 VFNWRDPTQEDPEEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGKPANFLD 314

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GG A    +  AF++I SD  V GI +NIFGGI+RCD + +G+++A K   ++IP+V+R
Sbjct: 315 CGGTATPATIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVVR 374

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G N+     LI  SGL +    DLD AA+KIV 
Sbjct: 375 LQGTNMQQAKELIDNSGLKLFAFEDLDPAAEKIVE 409


>gi|301107704|ref|XP_002902934.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Phytophthora infestans T30-4]
 gi|262098052|gb|EEY56104.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Phytophthora infestans T30-4]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 254/396 (64%), Gaps = 7/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           +N+HE+Q+  +++ + V   +G+   +   A++A   + G       V+K+Q   GGRG 
Sbjct: 95  LNLHEFQSLEIMKGFGVATPQGIPADTPAEAKAAFSKIRGDREGVDVVIKAQALTGGRGL 154

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FK      KGGV + +  +      +++LG TL+TKQTG  G  V  V++ +   + R
Sbjct: 155 GTFKN---GFKGGVHMCTKPEQAEDFAKKMLGETLVTKQTGAKGIEVAKVFLMERVWMRR 211

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y S+L+DR S     +AS  GG  IE+VA+  P+ IFK  +D   G T E VA L   
Sbjct: 212 EMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKENVDISTGPTDEQVARLAKA 271

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L  +G+          NLY  F   D +L+EINPL   + G +   D+K+++DDNA +RH
Sbjct: 272 LGGEGEVLKKLETQIKNLYDMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRH 331

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD ++ED RE+EA  ++L+YI LDGNIGC+VNGAGLAMATMDII LYGG+PANF
Sbjct: 332 KEIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANF 391

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +++V  AF+I+  D  VK IL+NIFGGIMRCDV+  GI++A K++ +  P++
Sbjct: 392 LDVGGGATEEQVKKAFEILDGDDQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPVI 451

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RL+G NV+   ++IAESG+ +I A DL+DAA+K V
Sbjct: 452 IRLQGTNVEPARKIIAESGIKMIVADDLEDAAEKAV 487


>gi|156546290|ref|XP_001605984.1| PREDICTED: similar to ENSANGP00000017707 [Nasonia vitripennis]
          Length = 450

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 179/389 (46%), Positives = 240/389 (61%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + ++L +  +P  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 39  LNVHEHISYSILNEAGIPTPKFGVAKTPDEAAKLATDLNTKDIVLKAQVLAGGRGKGHFK 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                +  GV++  + +       ++LG  L+TKQTG  G   N V V       +E YL
Sbjct: 99  ---GGNVSGVKMCETPEEAKQLASQMLGKLLVTKQTGEAGRICNAVMVTQRMFPRKEYYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   PQ I    ID   G+T +    +   L L+
Sbjct: 156 AVMMERAFGGPVIIASSQGGVNIEEVAATNPQAIMYEPIDINKGITKDQADRIAVKLGLE 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +  N+Y  F  KD  LLE+NPL    NG    LD K  FDDNA +R  D+ 
Sbjct: 216 NVKEYIS-KMIMNMYSLFVKKDALLLEVNPLAEDINGEYFALDCKCRFDDNAEFRQKDLF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA +  L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKFELNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 335 GGATASAVKEAFKIITSDSKVHALLVNIFGGIMRCDVIAEGIIAATKELDLKIPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA +GL ++   DLD+AA+
Sbjct: 395 GTNVDEAKALIANAGLKIVPVDDLDEAAR 423


>gi|126731207|ref|ZP_01747015.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
 gi|126708509|gb|EBA07567.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
          Length = 393

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 170/383 (44%), Positives = 241/383 (62%), Gaps = 13/383 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           M+IHE+QAK +L+ + VPV KG V  S   A    + L   GP +VVK+Q+H+GGRG+  
Sbjct: 1   MDIHEHQAKDILKGFGVPVPKGFVAYSPEQAAYCARALGGAGP-WVVKAQVHSGGRGEA- 58

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  +   V+     +LG+ L+TKQT   G  V  +YVE+ +DI +EL
Sbjct: 59  ---------GGVKLCKTDAEVMDYAASLLGTRLVTKQTDAQGKGVYRLYVEEASDIAQEL 109

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL  ++DR S  +  +AS  GGM+IE++A + P  + + +IDP +G+       L   L 
Sbjct: 110 YLGFVLDRKSERIMIVASGHGGMEIEDLAHEDPDSLVRSVIDPAVGLREYQARDLGFRLG 169

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L G             Y+A+ D D  ++EINPL+I   G L  LD+K+SFD NALYR   
Sbjct: 170 LTGPQVTQFVTFLQACYRAYRDLDAMMVEINPLVITGKGDLVALDAKMSFDTNALYRRPQ 229

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  LRD  +ED RE  A  + L+Y+ LDG+IGC++NGAGLAMA+MD+I+L GG PANFLD
Sbjct: 230 VAALRDPGQEDPREAMAADNGLAYVGLDGDIGCIINGAGLAMASMDMIQLAGGQPANFLD 289

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA  ++V  AF+ + SD +V  IL+NIF GI RCD + KG++ A  +V I IP+V+R
Sbjct: 290 IGGGASPERVCQAFRTVLSDRNVSVILVNIFAGINRCDWIAKGVIRAYTDVGIEIPVVVR 349

Query: 359 LEGANVDIGNRLIAESGLNVITA 381
           L G NV+ G ++I ESGL +I+A
Sbjct: 350 LSGTNVEEGRKIIRESGLPIISA 372


>gi|260945463|ref|XP_002617029.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238848883|gb|EEQ38347.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 425

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 172/393 (43%), Positives = 242/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL  Y V V KG   ++   A  A K+L     V+K+Q   GGRGKG F 
Sbjct: 31  LSLHEYRSAALLESYGVGVPKGFAATTPEGAYEAAKSLGTNELVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E YL
Sbjct: 91  N---GFQGGVKLISSPEEAKDLAGKMLHHKLITKQTGAAGKEVTAVYIVERRDARTEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR++ +   +AS QGGMDIE VA   P  I    +D   GVT E    +  +L   
Sbjct: 148 AILMDRSTQLPMIVASAQGGMDIEGVAAKDPDAIKTFSVDLNEGVTDELATKVASVLGYT 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A  +      NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 208 EEAIPEAAKAVQNLYKVFTEKDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED +E EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 268 SWRDPTQEDPQESEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SD  V GI +NIFGGI+RCD + +G+++A K  K++IP+V+RL+
Sbjct: 328 GTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFKLDIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N++    LI  SGL +    DLD AA+KIV 
Sbjct: 388 GTNMEKAKELIENSGLKLYAFEDLDPAAEKIVQ 420


>gi|310794504|gb|EFQ29965.1| succinate-CoA ligase [Glomerella graminicola M1.001]
          Length = 447

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 179/396 (45%), Positives = 242/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y V V KG V  S   A++  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGVGVPKGSVAKSAAEAKAIAKEIGGEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPTEAEMFAEQMIGHKLITKQTGAGGKLCNSVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT E    +   L   
Sbjct: 154 AILMDRASQAPVIVSSSQGGMDIETVAKENPDAIITTNIDINKGVTDEIARDIAVKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA YR  DI 
Sbjct: 214 EQCIEDAKDTIQKLYKIFLEKDATQIEINPLSETSDHKVLCMDAKFGFDDNADYRQKDIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL  G PANFLDVG
Sbjct: 274 ALRDTTQEDADEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNKGTPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD++ +G+++  KE+ + IP++ RL+
Sbjct: 334 GGATPAAIKEAFELITSDPKVSAIFVNIFGGIVRCDLIAQGLINTSKELNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+  + +I  S + + +  DL  AA+K V   K
Sbjct: 394 GTNVEAAHEIINNSSMKIFSIDDLQTAAEKAVQLSK 429


>gi|46849708|ref|NP_035636.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           precursor [Mus musculus]
 gi|52788305|sp|Q9Z2I9|SUCB1_MOUSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|26349481|dbj|BAC38380.1| unnamed protein product [Mus musculus]
 gi|26353900|dbj|BAC40580.1| unnamed protein product [Mus musculus]
 gi|33989905|gb|AAH56353.1| Succinate-Coenzyme A ligase, ADP-forming, beta subunit [Mus
           musculus]
 gi|35505380|gb|AAH57605.1| Succinate-Coenzyme A ligase, ADP-forming, beta subunit [Mus
           musculus]
 gi|74141275|dbj|BAE35942.1| unnamed protein product [Mus musculus]
 gi|74210138|dbj|BAE21343.1| unnamed protein product [Mus musculus]
 gi|74226090|dbj|BAE35647.1| unnamed protein product [Mus musculus]
          Length = 463

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 53  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 111

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 112 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 170 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 230 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 441


>gi|148237470|ref|NP_001089908.1| succinate-CoA ligase, GDP-forming, beta subunit [Xenopus laevis]
 gi|83318262|gb|AAI08803.1| MGC132166 protein [Xenopus laevis]
          Length = 431

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 176/397 (44%), Positives = 239/397 (60%), Gaps = 7/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  Y V V + +V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 37  LNLQEYQSKKLMADYGVTVQRFIVADNASEALEAAKKLKAREIVLKAQILAGGRGKGTF- 95

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV +      V    ++++G  L TKQT   G +V  V V +  DI RE 
Sbjct: 96  ----DSGLKGGVHLTKDPSKVEELTKQMIGFNLTTKQTAAGGVKVQKVMVAEALDITRET 151

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR       + S QGGMDIEEVA+  P+ IFK  ID   GV       + D L 
Sbjct: 152 YLAILMDRACNGPVLVGSPQGGMDIEEVAEKTPELIFKEEIDIFEGVKDCQALRMADNLG 211

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G  +    +    LY  F   D + +EINP      G++   D+KI+FDDNA +R  +
Sbjct: 212 FKGPLQQQAAEQIKRLYDLFLKVDATQVEINPFGETPEGQVVCFDAKINFDDNAEFRQKE 271

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  + +  E D  E EA  ++L YI LDGNI C VNGAGLAMAT DII L+GG PANFLD
Sbjct: 272 IFAMDNTLEMDPIENEANSYDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFLD 331

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+R
Sbjct: 332 LGGGVKESQVYQAFKLLTADPRVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVR 391

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV    R++AESGL + +A DLDDAA+K V ++
Sbjct: 392 LEGTNVHEAKRILAESGLPITSANDLDDAAKKAVASI 428


>gi|54038306|gb|AAH84473.1| LOC496495 protein [Xenopus (Silurana) tropicalis]
          Length = 420

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/397 (43%), Positives = 241/397 (60%), Gaps = 7/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 26  LNLQEYQSKKLMADHGVTVQRFFVADNANDALDAAKRLKAREIVLKAQILAGGRGKGTF- 84

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV +      V    ++++G  L TKQT   G +V+ V V +  DI RE 
Sbjct: 85  ----DSGLKGGVHLTKDPNKVEELTKQMIGYNLTTKQTVAGGVKVHKVMVAEALDISRET 140

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR       + S QGGMDIEEVA+  P+ IFK  ID   G+       + D L 
Sbjct: 141 YLAILMDRACNGPVLVGSPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQALRMADNLG 200

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G  +    +    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +
Sbjct: 201 FKGPLQQQAAEQIKRLYHLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKE 260

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  + D SE D  E EA  ++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD
Sbjct: 261 IFAMDDTSETDPIENEANSYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLD 320

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+R
Sbjct: 321 LGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVR 380

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV    R++AESGL + +A DLDDAA+K V ++
Sbjct: 381 LEGTNVHEAKRILAESGLPITSANDLDDAARKAVASI 417


>gi|74139919|dbj|BAE31798.1| unnamed protein product [Mus musculus]
          Length = 470

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 60  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 118

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 119 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 176

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 177 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 236

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 237 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 296

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 297 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 356

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 357 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 417 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 448


>gi|148703906|gb|EDL35853.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit, isoform
           CRA_b [Mus musculus]
          Length = 442

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 32  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 91  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 148

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 149 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 208

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 209 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 329 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 389 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 420


>gi|3766201|gb|AAC64398.1| ATP-specific succinyl-CoA synthetase beta subunit [Mus musculus]
 gi|148703905|gb|EDL35852.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit, isoform
           CRA_a [Mus musculus]
          Length = 426

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 16  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 74

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 75  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 132

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 133 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 192

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 193 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 252

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 253 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 312

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 313 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 372

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 373 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 404


>gi|156050539|ref|XP_001591231.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154692257|gb|EDN91995.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 463

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 244/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLRKY++ V  G V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 53  LSIHEYLSADLLRKYDIGVPNGAVAKSAAEAEAIAKKIGGDDMVIKAQVLAGGRGKGTFD 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 113 N---GLKGGVRVIYSPTEAKMFAEQMIGHKLVTKQTGAQGRICNSVYICERKFARREFYL 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT +    +   +   
Sbjct: 170 AILMDRASQGPVIVSSSQGGMDIETVAKESPNAITTTYIDIHKGVTDDIARKIVTDIGFS 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  D+ 
Sbjct: 230 EQCIEDAKDTVQKLYKIFMEKDATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKDVF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I L G+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 290 EWRDTTQEDAEEVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF +ITSD  V  I +NIFGGI+RCD + +G++S V+ + + IP++ RL+
Sbjct: 350 GGATPQAIREAFTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISTVESMNLRIPIIARLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL  AA+K V   K
Sbjct: 410 GTNMEAAHQLINDSGLKIFSIDDLQSAAEKAVQFSK 445


>gi|74151797|dbj|BAE29687.1| unnamed protein product [Mus musculus]
          Length = 470

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 60  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 118

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 119 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 176

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 177 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 236

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 237 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 296

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 297 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 356

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 357 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 417 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 448


>gi|307566427|ref|ZP_07628862.1| succinate-CoA ligase, beta subunit [Prevotella amnii CRIS 21A-A]
 gi|307344852|gb|EFN90254.1| succinate-CoA ligase, beta subunit [Prevotella amnii CRIS 21A-A]
          Length = 377

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 182/400 (45%), Positives = 243/400 (60%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +   Y +PV + ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEFQAKKIFADYGLPVERSILCKTPDEAVAAYKQLCVKKVVVKAQVHIGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ K V      ILG  +        G  V  + V +  DI  E Y 
Sbjct: 58  -------GGVKLCSNEKEVREHATAILGMNI-------KGYTVEKILVGEAVDISAEYYT 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
           S+LVDRT+     + S  GGMDIE+VAKD P+KI K++IDPLIG    V  E    L D 
Sbjct: 104 SILVDRTTKCPILMLSRSGGMDIEQVAKDTPEKIAKIVIDPLIGLSDYVAREAAFKLFDN 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +E   QA      LF NLY+ F DKD SL EINPL+ + +G L+ +D+K++FDDNAL+RH
Sbjct: 164 MEQVKQAV----PLFKNLYRLFVDKDASLAEINPLVKLSDGTLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + +EE+ +E  AK+   SY+ L GNIGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 SDVAELFEPTEEEKKERAAKEKGFSYVNLGGNIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  VK +LINIFGGI RCD + KG+L A K ++ +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVAKGLLEAFKIIQTDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  L+   G +      + DA  K V   K
Sbjct: 340 IRLTGTNEKEGRALL--EGTHFTVGKSMADAGHKAVELSK 377


>gi|154148943|ref|YP_001406693.1| succinyl-CoA synthetase beta chain (SCS-alpha)(vegetative protein
           63) (VEG63) [Campylobacter hominis ATCC BAA-381]
 gi|189046902|sp|A7I2F2|SUCC_CAMHC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|153804952|gb|ABS51959.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Campylobacter hominis ATCC BAA-381]
          Length = 387

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 178/398 (44%), Positives = 237/398 (59%), Gaps = 14/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L R++ + V+ G +  S   A    K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKELCREFGINVSNGALALSADEAVEVAKKLGGNVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG TL+TKQTGP G  V  +Y+E G +I +E Y+
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKKYANQILGMTLVTKQTGPKGKLVRKIYIEQGCNIKKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL  +R    +  IAS  GGM IEEV K+    I  L IDP IG+ +     + D L   
Sbjct: 111 SLTFNRAKEQIGLIASASGGMGIEEVDKNL---IKTLNIDPQIGLKAFHAYEVGDFLGFD 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LYK +   D +L+EINP+++        LD+K+ FDD AL+RH +I 
Sbjct: 168 KDLNNKFYKFLNGLYKLYIATDANLVEINPMVLTAEDEFFALDAKMGFDDAALFRHENIA 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EE+S E+EAKQ+ LSY+ LDG+IGCMVNGAGLAM TMD I   GG  ANFLDVG
Sbjct: 228 AMRDLDEEESSEVEAKQYGLSYVKLDGDIGCMVNGAGLAMGTMDTITYCGGKSANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I +NIFGGI+RCD + KGIL A K  K+ IP+V+RL+
Sbjct: 288 GGASAETVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIAKGILEATKLTKVEIPVVVRLD 347

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      L+ E+ + N+ +A DL++ A+  V  V G
Sbjct: 348 GTNAKEAIELLKEANIENIYSAHDLEEGAKLAVKLVNG 385


>gi|239608459|gb|EEQ85446.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis ER-3]
          Length = 451

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 173/403 (42%), Positives = 243/403 (60%), Gaps = 10/403 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAGQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P+ I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIESVAKETPEAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRL-------IAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+   + L       I ESGL + +  DL +AA+K V   K
Sbjct: 391 GTNMAKAHELKTNSNVNINESGLKIFSMEDLQNAAEKSVQFSK 433


>gi|45190396|ref|NP_984650.1| AEL211Wp [Ashbya gossypii ATCC 10895]
 gi|44983292|gb|AAS52474.1| AEL211Wp [Ashbya gossypii ATCC 10895]
          Length = 417

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 173/394 (43%), Positives = 246/394 (62%), Gaps = 6/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LLR+Y +   +G   S+   A  A   L G   VVK+Q   GGRGKG F 
Sbjct: 22  LSIHEYQSSELLRQYGIGTPRGQAASTAQQAYDAAAGL-GHELVVKAQALTGGRGKGHFN 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 + GV + SS +       ++LG+ LITKQ+G  G  V+ VYV +      E YL
Sbjct: 81  ---TGLQSGVHMISSAEEARELAEQMLGNRLITKQSGAKGKPVSAVYVVERVKARHEAYL 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     I S+QGGM+IEEVA   P  I K  +D   G+ +E  A++   L   
Sbjct: 138 SILMDRQTKKPLIICSSQGGMNIEEVAHSNPDAIKKFYVDVKKGLDAETAAAVARSLGFS 197

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL--DSKISFDDNALYRHLD 238
            +A  D  D    LYK F +KD + +EINPL  ++    +V+  D+K  FDDNA +R  +
Sbjct: 198 QEAEADAADAVQKLYKIFREKDATQIEINPLSEVEGQHTKVMCMDAKFGFDDNASFRQQE 257

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD+++ED  E+ AK  +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFLD
Sbjct: 258 VYSWRDLTQEDPDEVVAKNSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 317

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AFK+I S++ VK I +NIFGGI+RCD + +G+++A K + + +P+V R
Sbjct: 318 CGGGATPETIETAFKLILSNTKVKAIFVNIFGGIVRCDYVAQGLVAATKNLDVKVPIVAR 377

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           L+G N++ G R+I ESGL +    +LD AA+K+V
Sbjct: 378 LQGTNLEEGRRIIKESGLKIYGFDELDPAAEKVV 411


>gi|158749584|ref|NP_001101857.2| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Rattus norvegicus]
          Length = 465

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 55  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 113

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 114 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGAKGRICNQVLVCERKYPRREYYF 171

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  +D + GV  E   +L   +   
Sbjct: 172 AITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVKEPVDIIEGVKKEQAVTLAKKMGFP 231

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 232 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVLCMDAKINFDSNSAYRQKKIF 291

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED R+ +A   +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 292 ALQDWSQEDERDKDAADADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 351

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCD++ +GI+ AVK+++I IP+V+RL+
Sbjct: 352 GGATVHQVTEAFKLITSDKRVQAILVNIFGGIMRCDIIAQGIVMAVKDLEIRIPVVVRLQ 411

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 412 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 443


>gi|195152918|ref|XP_002017383.1| GL21555 [Drosophila persimilis]
 gi|194112440|gb|EDW34483.1| GL21555 [Drosophila persimilis]
          Length = 474

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 238/393 (60%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESGIPTPRFAVAKNGKEASDIANKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    K+      +++   LITKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDAKTAEDISSKMIDQLLITKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID   G+T E    + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKENPDAIIYEPIDIARGLTEEQACKIVEKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   +  NLY+ F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGADEHIKMLLNLYQLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATADAVKAAFKIITSDRKVLCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRASGLKILARDDLDKAADLAVH 427


>gi|297620665|ref|YP_003708802.1| Succinyl-CoA synthetase, beta subunit [Waddlia chondrophila WSU
           86-1044]
 gi|297375966|gb|ADI37796.1| Succinyl-CoA synthetase, beta subunit [Waddlia chondrophila WSU
           86-1044]
          Length = 388

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 167/378 (44%), Positives = 231/378 (61%), Gaps = 10/378 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HE+QAK +L KY +P+    VIS +   ES I  L     V+K Q+HAGGRGK    
Sbjct: 1   MNTHEFQAKKILEKYGMPIPPFRVISDLSELESVISDLALDQAVIKVQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +    +E+LG  ++  QTG  G   + + +    D  +E Y+
Sbjct: 58  -------GGVKLAKTPEQIREAAKELLGMKIVNNQTGEEGVVAHKILITALTDYRKEYYM 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +     + S  GG+DIEEVA+  P +I KL +       +  +  L   +   
Sbjct: 111 GAVIDRQNARAVLMVSPDGGVDIEEVAEKTPDRILKLPMSLNGTFRNYQLIELVKFMGWS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +    G  L   L KAF D D SL EINPL+  + G L VLD+K+S DDNALYR  +I 
Sbjct: 171 KETAKQGIALAKGLAKAFMDSDASLFEINPLVETEEGDLLVLDAKLSVDDNALYRQKEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D ++    E  A +HNL+Y++L+G +GCMVNGAGLAMATMD++  +GG PANFLDVG
Sbjct: 231 SFYDETQIPKNEAMAHEHNLAYVSLEGEVGCMVNGAGLAMATMDMVYHFGGTPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA  FKII +D +VK IL+NIFGGIM C  L  GI++AV E+K+ +PLV+R+E
Sbjct: 291 GGASKEKVAEGFKIILTDPNVKAILVNIFGGIMNCATLASGIVAAVNELKLQVPLVVRME 350

Query: 361 GANVDIGNRLIAESGLNV 378
           G NVD G R++A SGLN+
Sbjct: 351 GTNVDEGRRILAGSGLNI 368


>gi|126327699|ref|XP_001378919.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 438

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 174/393 (44%), Positives = 250/393 (63%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 28  LSLHEYLSMELLQEAGISVPKGQVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGIFE 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 88  ---SGLKGGVKIVFSPEEAKAVSAQMIGKKLFTKQTGEKGRICNNVLVCERRYPRREYYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++RT      I S QGG++IE+VA + P+ IFK  ID + G+  E    L   +   
Sbjct: 145 AITMERTFQGPVLIGSAQGGVNIEDVAAENPEAIFKEPIDIVDGIKKEQAVRLAQKMGFP 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D    LY+ F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 205 SSLVDSAADNMVKLYELFLKYDATMVEINPMVEDADGGVLCMDAKINFDSNSSYRQKKIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 265 DLQDWTQEDERDKDAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK++ I IP+V+RL+
Sbjct: 325 GGATVNQVTQAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLDIKIPIVVRLQ 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  VD    LIA+SGL ++   DLD+AA+ +V 
Sbjct: 385 GTRVDDAKALIADSGLKILACDDLDEAAKMVVK 417


>gi|269925410|ref|YP_003322033.1| succinyl-CoA synthetase, beta subunit [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789070|gb|ACZ41211.1| succinyl-CoA synthetase, beta subunit [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 382

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 167/389 (42%), Positives = 254/389 (65%), Gaps = 20/389 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ++ +L K+ +P+  G++  SV  A  A  +L  P+ V+K+Q+H+GGRGK    
Sbjct: 1   MNLHEYQSREILAKHGIPIPPGILARSVEEAVEAASSLGYPV-VIKAQVHSGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S + +     E +  T+++   G  G  V+ + V   ADI +E YL
Sbjct: 57  -------GGIKLVNSQREL-----EYVAPTILSMNIG--GRPVSALLVVPAADIQKEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS +GG+DIEEVA+++P  I ++   P +G+       L   +  +
Sbjct: 103 SVVLDRELKTFTLIASAEGGVDIEEVAREHPDSILRVPAHPWLGLQPYQARELAYKVGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++  +LY+   D + SL+EINPL  + +G L  LDSKI  DDN+L+RH DI 
Sbjct: 163 GSLVRTFVEIAMSLYRCALDVEASLVEINPLAKVSSGDLIALDSKIVVDDNSLFRHPDIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+E++ E+EA +  +SYI LDGNIGCMVNGAGLAMATMD++KLYGG+PANFLD+G
Sbjct: 223 EMRDLSQEETAEVEASRVGISYIKLDGNIGCMVNGAGLAMATMDLVKLYGGSPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V AA  II SD  V  +LINIFGGI RCD + +GI+  ++ +K  +P+V+RL 
Sbjct: 283 GGAHADQVEAAMNIILSDEKVSAVLINIFGGITRCDDVARGIVEGLRNIKRGVPIVVRLV 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G N + G+R++ ++GL  +++  L++AA+
Sbjct: 343 GTNEEEGHRILEDAGLRSLSS--LEEAAK 369


>gi|198454181|ref|XP_002137808.1| GA26331 [Drosophila pseudoobscura pseudoobscura]
 gi|198132687|gb|EDY68366.1| GA26331 [Drosophila pseudoobscura pseudoobscura]
          Length = 451

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 238/393 (60%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESGIPTPRFAVAKNGKEASDIANKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    K+      +++   LITKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPKTAEDISSKMIDQLLITKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID   G+T E    + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKENPDAIIYEPIDIARGLTEEQACKIVEKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   +  NLY+ F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGADEHIKMLLNLYQLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATADAVKAAFKIITSDRKVLCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRASGLKILARDDLDKAADLAVH 427


>gi|187469277|gb|AAI66998.1| Sucla2 protein [Rattus norvegicus]
          Length = 438

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 249/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 28  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 87  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGAKGRICNQVLVCERKYPRREYYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  +D + GV  E   +L   +   
Sbjct: 145 AITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVKEPVDIIEGVKKEQAVTLAKKMGFP 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 205 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVLCMDAKINFDSNSAYRQKKIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED R+ +A   +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 265 ALQDWSQEDERDKDAADADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCD++ +GI+ AVK+++I IP+V+RL+
Sbjct: 325 GGATVHQVTEAFKLITSDKRVQAILVNIFGGIMRCDIIAQGIVMAVKDLEIRIPVVVRLQ 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 385 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 416


>gi|260591649|ref|ZP_05857107.1| succinyl-CoA ligase [ADP-forming] subunit beta [Prevotella
           veroralis F0319]
 gi|260536449|gb|EEX19066.1| succinyl-CoA ligase [ADP-forming] subunit beta [Prevotella
           veroralis F0319]
          Length = 379

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 177/400 (44%), Positives = 246/400 (61%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK++   Y +PV + +V  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKSIFASYGLPVDRNIVCRTPDEAVAAYKQLGLAKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ + +      ILG  +        G  V+ V V +  +I  E Y+
Sbjct: 58  -------GGVKLGSNEEEIRQHAEAILGMDI-------KGFTVDRVLVSEAVNIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP IG++     E    L D 
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPTIGMSDFLAREAAFKLFDN 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      +F NLYK F +KD SL EINPL++ + G L+ +D+K++FDDNAL+RH
Sbjct: 164 MAQVKQAV----PIFKNLYKLFVEKDASLAEINPLVMTQEGTLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI EL + + E+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDIAELFEPTAEEKKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ +D  VK +LINIFGGI RCD + KG+L A K ++ +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLADKHVKVVLINIFGGITRCDDVAKGLLEAFKVIQTDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  ++  +  NV T+  + DA  K V   K
Sbjct: 340 IRLTGTNEAEGRAILEGTHFNVATS--MADAGHKAVELSK 377


>gi|149200487|ref|ZP_01877500.1| succinyl-CoA synthetase beta chain [Lentisphaera araneosa HTCC2155]
 gi|149136410|gb|EDM24850.1| succinyl-CoA synthetase beta chain [Lentisphaera araneosa HTCC2155]
          Length = 386

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/388 (46%), Positives = 247/388 (63%), Gaps = 15/388 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ L R+Y +PV +G V  S+   E     L     VVK+Q+HA         
Sbjct: 1   MLIHEYQARDLFREYGIPVTEGKVFESLEGVEEYATELGQ--CVVKAQVHA--------- 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +++  I     ILG  LIT QT   G +VN + +  G DI +E YL
Sbjct: 50  -GGRGKGGGVKFAPTVEKAIEHATNILGMQLITHQTTAEGCKVNKILLCPGLDIAKEYYL 108

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L +DR +     IAST+GGMDIEEVA+  P+KI K+ +DP  G  +     + D L  +
Sbjct: 109 ALTIDRATQCPFIIASTEGGMDIEEVAESTPEKITKIKVDPSAGCWAYHGRKVADALGFE 168

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G QARI    +  NLYK F +KD S++EINPL++ ++  +  +D K++FD NALYR  DI
Sbjct: 169 GKQARIVAA-VAQNLYKMFMEKDCSIVEINPLVVTEDNEIYAIDGKVNFDSNALYRQKDI 227

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD  EE+  E+EA +H+L+YI LDGN+ CMVNGAGLAMATMD+I++ GG+PANFLDV
Sbjct: 228 VELRDPLEEEPLEVEASEHDLAYIKLDGNVACMVNGAGLAMATMDMIQISGGSPANFLDV 287

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMR 358
           GG A   +V  AF+I+  D +V+GILIN+FGGI+RCD++ +G++ AVK +  I  P+V+R
Sbjct: 288 GGTATPARVEQAFRILLKDPNVEGILINVFGGIVRCDLVAEGVIEAVKNIGNIEQPIVIR 347

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           L G N   G +L+AES L   TA  L++
Sbjct: 348 LSGTNSTEGKKLLAESDLTFETADSLNE 375


>gi|118580136|ref|YP_901386.1| succinyl-CoA synthetase subunit beta [Pelobacter propionicus DSM
           2379]
 gi|189081765|sp|A1APQ8|SUCC_PELPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118502846|gb|ABK99328.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pelobacter
           propionicus DSM 2379]
          Length = 394

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 175/392 (44%), Positives = 243/392 (61%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L  + + + +G V  +    E A + L G   V+K+Q++A         
Sbjct: 1   MKIHEYQAKDILAGFGIAIPRGRVAMNASQVERAARELGGHC-VIKAQVYA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+RV           +E+LG+ L+T QTGP G  V  + VE+  DI RELYL
Sbjct: 51  -GGRGKGGGIRVAQDPGQAGEIAKELLGTKLVTPQTGPEGLEVRRLLVEEVVDIERELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR S     IAS +GGMDIEE+A+  P +I  L IDP IG+ S         L L 
Sbjct: 110 SITLDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSYQARRTALGLGLV 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  +L  NLY+   ++D SL+EINPL++   G L  +D+K++FDDNAL RH +  
Sbjct: 170 GPLCEECVELILNLYRCLLERDCSLVEINPLVVTNAGWLVAMDTKMTFDDNALQRHCEYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D S+ +  EI A + +LSYI L G IGCMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 230 DLVDYSQLNPLEIAAARFDLSYIKLSGAIGCMVNGAGLAMATLDVLKEAGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AF+II  D  V+G+ +NIFGGIMRCD++ +GI+ A       +P+V+R++
Sbjct: 290 GGASREKVAEAFRIILQDRDVRGVFVNIFGGIMRCDIIAQGIIDAASGGGCRLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  V+ G +L+ ESGLN+    ++ D AQ+IV
Sbjct: 350 GNRVEEGKQLLRESGLNIRIGENMGDGAQQIV 381


>gi|325119408|emb|CBZ54961.1| cDNA FLJ54097, highly similar to Succinyl-CoA ligase (ADP-forming)
           beta-chain, mitochondrial, related [Neospora caninum
           Liverpool]
          Length = 495

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 171/405 (42%), Positives = 249/405 (61%), Gaps = 18/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG--------PL-YVVKSQIHA 51
           +N+HEYQ+  +++++++   K  V S+   AE    T           P+ +VVK+Q+ A
Sbjct: 69  LNLHEYQSMKIMKEFHITTPKFAVASTAKEAEQEAATFLSETQSGDGEPVDFVVKAQVLA 128

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           GGRG G F+E     +GGV+V  S + V     ++LG TL+TKQTG  G   N V V + 
Sbjct: 129 GGRGLGFFRE--NGYQGGVQVCESPREVGIVADKMLGKTLVTKQTGKEGKTCNKVLVTER 186

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
             I +E Y+++L+DR++G    I S +GG  IE++A +YP+ I K+ ID   G++   + 
Sbjct: 187 FFIRKEKYVAILMDRSAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLR 246

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              ++L   G            LY+ F  KD + +E+NPL+   +GR+ V D+K++FDDN
Sbjct: 247 EFAELLGFSGDRLEAACQCIRGLYELFTSKDCTQIEVNPLVETHDGRVLVCDAKLNFDDN 306

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +R  D+   RD S+ED RE+ A   +L+YI LDG+IGCMVNGAGLAMATMDII L+GG
Sbjct: 307 AAFRQKDVFAQRDYSQEDPREVAADAADLNYIGLDGSIGCMVNGAGLAMATMDIIHLHGG 366

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           +PANFLDVGGGADQ ++  A KII  D     +L+NIFGGIMRCDV+ KG+++A +EV  
Sbjct: 367 SPANFLDVGGGADQLQIIEALKIIQQDKRANCVLVNIFGGIMRCDVIAKGLVAAAREVGF 426

Query: 352 NIPLVMRLEGANVDIGNRLIAE-------SGLNVITAIDLDDAAQ 389
           + P+V+RLEG N +    ++ E       + L ++   D D AAQ
Sbjct: 427 DKPVVLRLEGTNKEAAKEVLREVRTDPAYASLQLLQEDDFDKAAQ 471


>gi|237829849|ref|XP_002364222.1| succinyl-CoA ligase, putative [Toxoplasma gondii ME49]
 gi|92399541|gb|ABE76512.1| mitochondrial putative ATP-specific succinyl-CoA synthetase beta
           subunit [Toxoplasma gondii]
 gi|211961886|gb|EEA97081.1| succinyl-CoA ligase, putative [Toxoplasma gondii ME49]
 gi|221487295|gb|EEE25527.1| succinyl-CoA ligase, putative [Toxoplasma gondii GT1]
 gi|221507087|gb|EEE32691.1| succinyl-CoA ligase, putative [Toxoplasma gondii VEG]
          Length = 498

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 174/405 (42%), Positives = 249/405 (61%), Gaps = 18/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PG----PL-YVVKSQIHA 51
           +N+HEYQ+  +++++++   K  V S+   AE    T     P     P+ +VVK+Q+ A
Sbjct: 72  LNLHEYQSMRIMKEFHITTPKFAVASTAKEAEQEAATFLSESPSGDGEPVDFVVKAQVLA 131

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           GGRG G F+E     +GGV+V  S + V     ++LG TL+TKQTG  G   N V V + 
Sbjct: 132 GGRGLGFFRE--NGYQGGVQVCESPREVGIVAEKMLGKTLVTKQTGKEGKLCNKVLVTER 189

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
             I +E Y+++L+DR +G    I S +GG  IE++A +YP+ I K+ ID   G++   + 
Sbjct: 190 FFIRKEKYVAILMDRGAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLR 249

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              ++L   G            LY+ F  KD + +E+NPL+   +GR+ V D+K++FDDN
Sbjct: 250 EFAELLGFSGDRLEAACQCIRGLYELFRSKDCTQIEVNPLVETHDGRVLVCDAKLNFDDN 309

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +R  DI   RD S+ED RE+ A   +L+YI L+G+IGCMVNGAGLAMATMDII L+GG
Sbjct: 310 AGFRQKDIFSQRDYSQEDPREVAADAADLNYIGLEGSIGCMVNGAGLAMATMDIIHLHGG 369

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           +PANFLDVGGGADQ ++  A KII  D     +L+NIFGGIMRCDV+ KG+++A KEV  
Sbjct: 370 SPANFLDVGGGADQHQIIEALKIIQQDKRANCVLVNIFGGIMRCDVIAKGLVAAAKEVGF 429

Query: 352 NIPLVMRLEGANVDIGNRLI-------AESGLNVITAIDLDDAAQ 389
           + P+V+RLEG N +    ++       A S L ++   D D AAQ
Sbjct: 430 DKPVVLRLEGTNKEAAKEVLKDVLTDPAYSALQLLQEDDFDKAAQ 474


>gi|322790101|gb|EFZ15137.1| hypothetical protein SINV_15804 [Solenopsis invicta]
          Length = 940

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/400 (46%), Positives = 248/400 (62%), Gaps = 16/400 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           +N+HE+ + +LL +  VP  K GV  +S  AA+ A   L     V+K+Q+ AGGRGKG F
Sbjct: 519 LNVHEHISYSLLNEAGVPTPKFGVAKTSDEAAKLA-ADLKTKDIVLKAQVLAGGRGKGHF 577

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           K     +  GV++  + +   S   ++LG  LITKQTG  G   N V V       +E Y
Sbjct: 578 K---GTNVSGVKMCETPEEAKSLAGQMLGKLLITKQTGEGGRICNGVMVTQRMFPRKEYY 634

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E    +   L L
Sbjct: 635 LAVMMERAFGGPVIIASSQGGVNIEEVAATNPTAIMYEPIDINKGITKEQAERIVSKLGL 694

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR----------VLDSKISFD 229
               +    ++  NLY+ F  KD  LLE+NPL    NG  +           LD K  FD
Sbjct: 695 D-NVKDYISNMIINLYQMFLKKDALLLEVNPLAEDINGNCKFIFLFRLVNFALDCKCRFD 753

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DNA +R  ++  LRD S+ED +E+EA + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+
Sbjct: 754 DNAEFRQKELFSLRDWSQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLH 813

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG PANFLDVGGGA    V  AFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A KE+
Sbjct: 814 GGEPANFLDVGGGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKEL 873

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
            + IP+V+RL+G NVD    LIA +GL ++   DLD+AA+
Sbjct: 874 SLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAAR 913



 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 165/392 (42%), Positives = 242/392 (61%), Gaps = 6/392 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + +HE+ A +LL++  +P     V  +   A +  K L     V+K+Q+ AGGR KG+FK
Sbjct: 89  LEVHEHIAYSLLKEAGIPTPPFWVAKTPDEAANLAKNLKTKDLVLKAQVLAGGRAKGQFK 148

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +    +  GV +   +K +      ++G  LITKQTG  G   N V V       +E Y+
Sbjct: 149 D---SNVSGVVIAEQVKELA---ESMIGKVLITKQTGSAGKICNSVMVVARMFPRKEYYM 202

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++RT      I S QGG++IE+VA   P+ +  L ID   G+T     S+ D L L 
Sbjct: 203 AVMLERTFDGPVMIVSKQGGVNIEDVAATNPEAVAYLPIDVSKGLTPAQANSIADKLGLT 262

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G ++     +  NLY+ F +KD  LLEINP      G    LD K  FDD+A +R  ++ 
Sbjct: 263 GNSKEIASLVASNLYELFVEKDALLLEINPFAEDICGEYYALDCKCKFDDSADFRQKELF 322

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D +E+EA++++L+YIAL GNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 323 ALKDMTQMDPKEVEAEKYDLNYIALTGNIGCMVNGAGLAMATMDIIKLYGGTPANFLDVG 382

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V   FKI++SD +V+ IL+NIFGGIMRCD++ +GI+ A +++ + IP+++RL+
Sbjct: 383 GTATVETVTEGFKILSSDPNVEAILVNIFGGIMRCDIIAQGIIDATEQLNLKIPIIVRLQ 442

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV    +LI ++ L VI+  D   AA+  V
Sbjct: 443 GTNVTKAKQLILDAKLKVISVDDFAQAAETSV 474


>gi|76573373|gb|ABA46791.1| succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 311

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 156/310 (50%), Positives = 217/310 (70%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  L+TKQTG  G  V+ VY+ +   ++ E+Y S+++DR +     IA  +GG  IE+
Sbjct: 1   MLGQMLVTKQTGAQGKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +A+ +P  I K+ ID   G++ ED A + D L  +   R D  +    LY  FC+ D ++
Sbjct: 61  LAEKFPDMIIKVPIDVFKGISDEDAAKVVDGLAPKVADRNDSIEQVKKLYNLFCETDCTM 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LEINPL    + +L   D+K++FDDNA YR  +I  LRD S+ED RE+ A + +L+YI L
Sbjct: 121 LEINPLAETSDNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGG A + +V  AFKI+T+D  VK IL
Sbjct: 181 DGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNATEGQVVEAFKILTADEKVKAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGIM+CDV+  GI++A K+V++ +P+++RLEG NV+ G R++ ESG+ +ITA DLD
Sbjct: 241 VNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGMKLITAEDLD 300

Query: 386 DAAQKIVHAV 395
           DAA+K V A+
Sbjct: 301 DAAEKAVKAL 310


>gi|300980468|ref|ZP_07175015.1| putative succinyl-CoA ligase [ADP-forming] subunit beta
           [Escherichia coli MS 200-1]
 gi|300307770|gb|EFJ62290.1| putative succinyl-CoA ligase [ADP-forming] subunit beta
           [Escherichia coli MS 200-1]
          Length = 312

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 158/308 (51%), Positives = 218/308 (70%), Gaps = 1/308 (0%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYV-EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
           +LGS L+T QTGP G  V+ + + E+   + +ELY  ++VDR S  V FI S +GG++IE
Sbjct: 1   MLGSQLVTYQTGPEGQYVSSILLCENIYPVRQELYFGMVVDRESQRVTFIVSPEGGVEIE 60

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +VA + P+KI  + IDPL GV    +  +  +L+L+         L    +KAF + D +
Sbjct: 61  KVAHETPEKISSVSIDPLTGVQPCHIREMFAVLQLEHGLFAAFSRLVNQAWKAFNELDFA 120

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           LLEINPL++ + G     D+K+S DDNALYRH ++Q LRD ++ED RE +A + +L+Y++
Sbjct: 121 LLEINPLVLRETGEFMCADAKVSLDDNALYRHPELQVLRDETQEDPRESQAAKLDLNYVS 180

Query: 265 LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
           LDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVGGGA Q++V+ AF++I SDS VK I
Sbjct: 181 LDGNIGCMVNGAGLAMATMDIIKLYGEQPANFLDVGGGATQERVSEAFRLIVSDSKVKAI 240

Query: 325 LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
           L+NIFGGI+RCD++ + I+ A+ E +I +P+V+RL G N   G RL+AESGL V     L
Sbjct: 241 LVNIFGGIVRCDMIARAIIYALNEARITLPVVVRLSGNNAAEGQRLLAESGLTVEAVDSL 300

Query: 385 DDAAQKIV 392
           DDAA++I+
Sbjct: 301 DDAAKRII 308


>gi|323343455|ref|ZP_08083682.1| succinyl-CoA ligase subunit beta [Prevotella oralis ATCC 33269]
 gi|323095274|gb|EFZ37848.1| succinyl-CoA ligase subunit beta [Prevotella oralis ATCC 33269]
          Length = 380

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 174/403 (43%), Positives = 250/403 (62%), Gaps = 29/403 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKA    Y +PV + ++  +V  A +A +TL     V+K+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKAFFADYGLPVDRSILCRTVEEAVTAYRTLGVDRAVIKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +  + V     +ILG T+        G  V+ + V +   I  E Y+
Sbjct: 58  -------GGVKVANGEEEVREYASKILGMTI-------KGFTVDRILVGEAVAIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCD- 175
           S+L+DR S     + S +GGMDIE+VA++ P+KI K+ IDPL+G+T     E    L D 
Sbjct: 104 SILIDRKSKSPLLMLSREGGMDIEQVARETPEKIHKITIDPLVGMTDYLAREAAFKLFDD 163

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           M E++    I     F NLY+ F +KD SL EINPL++ ++GRL+ +D+K++FD+NALYR
Sbjct: 164 MTEVKQAVPI-----FKNLYRLFTEKDASLAEINPLVLTEDGRLKAIDAKMTFDNNALYR 218

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D+ +L + +EE+ +E  AK    SYI L G+IGCMVNGAGLAMATMD+IKLYGG PAN
Sbjct: 219 HEDVFKLFEPTEEERKEQAAKDKGFSYINLGGSIGCMVNGAGLAMATMDMIKLYGGEPAN 278

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD+GG ++ +K+  A K++ SD  V+ +LINIFGGI RCD + KG++ A +++   IP+
Sbjct: 279 FLDIGGSSNPEKIVEAMKLLLSDKHVRVVLINIFGGITRCDDVAKGLIEAFEQLNTKIPI 338

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           V+RL G N   G  L+  +   V T+  + DA  K V   + +
Sbjct: 339 VIRLTGTNEVEGRELLHGTRFTVGTS--MADAGHKAVELARSL 379


>gi|73989280|ref|XP_542566.2| PREDICTED: similar to Succinyl-CoA ligase [ADP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, betaA
           chain) (SCS-betaA) (ATP-specific succinyl-CoA synthetase
           beta subunit) [Canis familiaris]
          Length = 437

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 27  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 87  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 144 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 204 SNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED RE  A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 264 DLQDWTQEDEREKGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 324 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI +SGL ++   DLD+AA+ +V
Sbjct: 384 GTRVDDAKALITDSGLKILACDDLDEAAKMVV 415


>gi|45361311|ref|NP_989233.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus (Silurana)
           tropicalis]
 gi|38969875|gb|AAH63370.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus (Silurana)
           tropicalis]
          Length = 460

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 170/392 (43%), Positives = 245/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL+   V + KG V  +   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 50  LSLHEYLSMDLLKSAGVAIPKGCVAKTPDEAFTVAKEIGSKDLVVKAQVLAGGRGKGTFE 109

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 110 ---GGLKGGVKIVYSPEEAKDIASQMIGKKLFTKQTGEKGRICNHVFICERRYPRREYYF 166

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S+ GG++IE+VA + P  I K  ID + G+  E    L + +   
Sbjct: 167 AIAMERAFQGPVLIGSSHGGVNIEDVAAENPDAIVKEPIDIVEGIKKEQAVRLAEKMGFP 226

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +   NLY  F   D +++EINP++   +G +  +D+KI+FD NA YR  ++ 
Sbjct: 227 SNIVDEAANCMINLYNLFMKYDATMVEINPMVEDASGVVMCMDAKINFDSNAAYRQKEVF 286

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 287 ELRDWSQEDERDRQAAKSDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 346

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AF++ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++++ IP+V+RL+
Sbjct: 347 GGATVHQVTEAFRLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQ 406

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI  SGL ++   DLD+AA+ +V
Sbjct: 407 GTRVDDAKALITASGLKILACDDLDEAAKMVV 438


>gi|163786029|ref|ZP_02180477.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteriales bacterium ALC-1]
 gi|159877889|gb|EDP71945.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteriales bacterium ALC-1]
          Length = 396

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 176/401 (43%), Positives = 245/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K LL  + V + +G+V  S  AA  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKELLSSFGVRIQRGIVAQSAKAAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V      I+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEEIAGNIIGMNLVTPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +   E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   +DP +G+      
Sbjct: 111 DNEPEEYYMSVLLNRGTGKNMIMYSTEGGMDIETVAEETPHLIFTEEVDPALGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D SL EINP++   + ++  +DSK++ DDN
Sbjct: 171 RVAFNLGLSGTAFKEMTKFVSALYTAYVKSDASLFEINPVLKTSDDKIMAVDSKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ ELRD+ EE+  E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHRDLAELRDLREENPIEVEAGALGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V AAFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVEAAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI   LI  SGL+V++A +  +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKELIDNSGLDVMSATEFQEAADKV 391


>gi|91082037|ref|XP_970725.1| PREDICTED: similar to AGAP004744-PA [Tribolium castaneum]
          Length = 447

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 174/389 (44%), Positives = 241/389 (61%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ +  LL+   + V K  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYTLLKDAGIQVPKFGVAKTKQEARKIAEDLKTKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S +       ++LG  L+TKQTG  G   N V V +     +E Y 
Sbjct: 98  N---GLKGGVRMVYSPEEAEDIAGQMLGQYLVTKQTGEKGRICNAVMVAERKFPRKEFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA + P  I    ID + G++ E    +   + L 
Sbjct: 155 AIMMERAFGGPVIIASSQGGINIEEVAAENPAAILYEPIDIVKGLSKEQAQKVAVNVGL- 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +   GD+   +Y  FC KD  L+EINP           LD+K  FDDNA +R  D+ 
Sbjct: 214 GSQKEKTGDMLLKMYDLFCKKDALLIEINPYAEDAGETYFSLDAKFRFDDNAAFRQKDLF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+ A + +L+YIALDG+IGC+VNGAGLAMATMDII L+GG+PANFLDVG
Sbjct: 274 ALRDWTQEDEKEVAAAKFDLNYIALDGSIGCLVNGAGLAMATMDIISLHGGSPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P++ RL+
Sbjct: 334 GGATAQAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELNLKMPIICRLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA SGL ++   +LD+AA+
Sbjct: 394 GTNVDDAKVLIASSGLKILPVDNLDEAAR 422


>gi|255719276|ref|XP_002555918.1| KLTH0H00880p [Lachancea thermotolerans]
 gi|238941884|emb|CAR30056.1| KLTH0H00880p [Lachancea thermotolerans]
          Length = 418

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 172/398 (43%), Positives = 244/398 (61%), Gaps = 5/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y V    G        A    K L     VVK+Q   GGRGKG F 
Sbjct: 24  LSIHEYRSAELLRQYGVGTPAGEAAFEPQQAYDIAKKLGHDALVVKAQALTGGRGKGHF- 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +++L   LITKQ+G  G  V+ VYV +  +   E YL
Sbjct: 83  --DTGLKSGVHMIESAEQARDLAKQMLKHRLITKQSGAKGKPVSAVYVVERVNAKHEAYL 140

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR S     I S++GGM+IEEVA   P  I K  +    G+T+E    +   L   
Sbjct: 141 SILMDRQSKKAMIICSSEGGMNIEEVAAKNPDAIKKFTVTESEGLTAETAKQISKSLGFS 200

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPL--IIMKNGRLRVLDSKISFDDNALYRHLD 238
            +A  D  D    LYK F +KD S +EINPL  +  ++ ++  +D+K  FDDNA +R  +
Sbjct: 201 AEAEADAADAVTKLYKIFKEKDASQIEINPLSEVEGQDTKVMCMDAKFGFDDNASFRQEE 260

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD+S+ED+ E+ AK+ +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFLD
Sbjct: 261 VYSWRDLSQEDADEVVAKKSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 320

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AFK+I S+  V GI +NIFGGI+RCD + +G++SA K + +++P+V R
Sbjct: 321 CGGGATPETIETAFKLILSNEKVDGIFVNIFGGIVRCDFVAQGLVSATKNLAVSVPIVAR 380

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N++ G R+I ESGL + +  +LD AAQK+V   +
Sbjct: 381 LQGTNLEEGRRIIEESGLKIYSFDELDPAAQKVVELTR 418


>gi|270007302|gb|EFA03750.1| hypothetical protein TcasGA2_TC013859 [Tribolium castaneum]
          Length = 444

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 174/389 (44%), Positives = 241/389 (61%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ +  LL+   + V K  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 35  LNVHEHISYTLLKDAGIQVPKFGVAKTKQEARKIAEDLKTKDIVLKAQVLAGGRGKGHFK 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S +       ++LG  L+TKQTG  G   N V V +     +E Y 
Sbjct: 95  N---GLKGGVRMVYSPEEAEDIAGQMLGQYLVTKQTGEKGRICNAVMVAERKFPRKEFYF 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA + P  I    ID + G++ E    +   + L 
Sbjct: 152 AIMMERAFGGPVIIASSQGGINIEEVAAENPAAILYEPIDIVKGLSKEQAQKVAVNVGL- 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +   GD+   +Y  FC KD  L+EINP           LD+K  FDDNA +R  D+ 
Sbjct: 211 GSQKEKTGDMLLKMYDLFCKKDALLIEINPYAEDAGETYFSLDAKFRFDDNAAFRQKDLF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+ A + +L+YIALDG+IGC+VNGAGLAMATMDII L+GG+PANFLDVG
Sbjct: 271 ALRDWTQEDEKEVAAAKFDLNYIALDGSIGCLVNGAGLAMATMDIISLHGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P++ RL+
Sbjct: 331 GGATAQAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELNLKMPIICRLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA SGL ++   +LD+AA+
Sbjct: 391 GTNVDDAKVLIASSGLKILPVDNLDEAAR 419


>gi|196004012|ref|XP_002111873.1| hypothetical protein TRIADDRAFT_55336 [Trichoplax adhaerens]
 gi|190585772|gb|EDV25840.1| hypothetical protein TRIADDRAFT_55336 [Trichoplax adhaerens]
          Length = 426

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 167/396 (42%), Positives = 246/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+R + V V    + S+   A +  K +    +V+K+QI AGGRGKG F 
Sbjct: 34  LNLQEYQSKGLMRDHMVNVQPFEIASTPDEAIALAKKMNVDEFVIKAQILAGGRGKGHFT 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  K GV +   ++ + +   ++LG  LITKQT   G  V  + + +  DI +E Y 
Sbjct: 94  ---SGLKKGVHLTKDVEEIGNLASQMLGYRLITKQTPGEGVPVKKLMIAEALDISKETYF 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       +AS  GG+DIEEVA + P+ I+K+ ID + G+  +    L   L+  
Sbjct: 151 AIVMDRHYNGPVIVASPAGGVDIEEVAANSPELIYKVPIDIVDGINDQQALELAKNLKFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D S +EINP     +GR+   D+KI+FDD+A YR  D+ 
Sbjct: 211 DSKVNEAAEQIKRLYNLFLSVDASQVEINPFGETTDGRVVCFDAKINFDDSAKYRQKDVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+SE D+REI A + NL+YI LDGNI C+VNGAGLAMATMDI+KL+GG PANFLDVG
Sbjct: 271 AMEDLSESDAREIAAAKSNLNYIGLDGNIACLVNGAGLAMATMDIVKLHGGEPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AF +++SD +VK IL+NIFGGI+ C  +  GI  A + + +N+P++ RLE
Sbjct: 331 GGVTEQQVYDAFNLVSSDKAVKSILVNIFGGIVNCATIANGITKAARGMNLNLPVIARLE 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD   +++ ESGLN+  A D +DAA+K V +++
Sbjct: 391 GTNVDEARKILLESGLNITPADDFEDAAKKAVASIQ 426


>gi|311266259|ref|XP_003131022.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Sus scrofa]
          Length = 463

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 248/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 441


>gi|213408347|ref|XP_002174944.1| succinyl-CoA ligase beta-chain [Schizosaccharomyces japonicus
           yFS275]
 gi|212002991|gb|EEB08651.1| succinyl-CoA ligase beta-chain [Schizosaccharomyces japonicus
           yFS275]
          Length = 428

 Score =  316 bits (809), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 169/390 (43%), Positives = 237/390 (60%), Gaps = 3/390 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHE  +  +LRKY V V +G V  +   AE     L     V+K+Q+ AGGRGKG F 
Sbjct: 18  LAIHECYSHDILRKYGVDVPRGAVARTGDEAEKVAHNLKTDDLVIKAQVLAGGRGKGHFD 77

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+            +++G  LITKQTG  G   N VYV +   I +E Y 
Sbjct: 78  ---TGLKGGVRIIYDPIEAKMFADQMIGHRLITKQTGAAGKPCNMVYVCERKYIRKEYYF 134

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGG++IE VA + P  I + L+     + +     L D L + 
Sbjct: 135 AILMDRQNKCPVIVASSQGGVNIEAVAAENPSAILQRLVPNKPTLDTRIAKELVDELGVS 194

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q +    D    LYK F D D + +EINP+    + R+  +D+K+ FDDNAL+RH D+ 
Sbjct: 195 PQCKAQAVDTITKLYKVFNDTDATQVEINPMAETTDQRVLCMDAKLKFDDNALFRHKDLL 254

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED  EI A +  L++I LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 255 ALRDESQEDPDEIRASRCGLNFIKLDGSIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 314

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ + +  AF +I  D  +  I +NIFGGI+RCDV+ +G++S V  +K+NIP++ RL+
Sbjct: 315 GSANAEAIREAFGLIVKDPKITAIFVNIFGGIVRCDVIAQGLISVVSSMKLNIPIIARLQ 374

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G N +    +IA SGL + +  +LD+AA K
Sbjct: 375 GTNQEAAKEVIANSGLRIFSFDELDEAASK 404


>gi|154289904|ref|XP_001545556.1| ATP-specific succinyl-CoA synthetase beta subunit [Botryotinia
           fuckeliana B05.10]
 gi|150848565|gb|EDN23758.1| ATP-specific succinyl-CoA synthetase beta subunit [Botryotinia
           fuckeliana B05.10]
          Length = 445

 Score =  316 bits (809), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 243/396 (61%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLRKY + V  G V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 35  LSIHEYLSADLLRKYGIGVPDGSVAKTAAEAEAIAKKIGGDDMVIKAQVLAGGRGKGTFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 95  N---GLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICNSVYICERKFARREFYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT +    +   +   
Sbjct: 152 AILMDRASQGPVIVSSSQGGMDIETVAKESPNAITTTYIDIHKGVTDDIARKIVTDIGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 212 EQCIEEAKDTVQKLYKIFMEKDATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKEVF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I L G+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 272 EWRDTTQEDAEEVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF +ITSD  V  I +NIFGGI+RCD + +G++S V+ + + IP++ RL+
Sbjct: 332 GGATPQAIKEAFTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISTVESMNLRIPIIARLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  ++LI +SGL + +  DL  AA+K V   K
Sbjct: 392 GTNMEAAHKLINDSGLKIFSIDDLQSAAEKAVQFSK 427


>gi|282858271|ref|ZP_06267457.1| succinate-CoA ligase, beta subunit [Prevotella bivia JCVIHMP010]
 gi|282588980|gb|EFB94099.1| succinate-CoA ligase, beta subunit [Prevotella bivia JCVIHMP010]
          Length = 377

 Score =  316 bits (809), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 179/400 (44%), Positives = 238/400 (59%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK     Y +PV + ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEFQAKKFFADYGLPVDRSILCKTPEEAVAAYKQLGVEKAVVKAQVHIGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   +      ILG  +        G  V  + V +  DI  E Y 
Sbjct: 58  -------GGVKLGSNENEIREHATAILGMNI-------KGYTVEKILVGEAVDIAAEYYT 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
           S+LVDR +     + S  GGMDIE+VAKD P+KI K++IDPLIG    V  E    L D 
Sbjct: 104 SILVDRKTKCPILMLSRAGGMDIEQVAKDTPEKIAKIVIDPLIGMSDYVAREAAFQLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L  QA      LF NLYK F +KD SL EINPL+ + +G L+ +D+K++FDDNAL+RH
Sbjct: 164 MALVKQAV----PLFKNLYKLFVEKDASLAEINPLVKLGDGTLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + + E+ +E EAK    SY+ L GNIGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVAELFEPTAEERKEREAKDKGFSYVNLGGNIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  VK +LINIFGGI RCD + KG+L A K +  +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVAKGLLEAFKIIHTDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  L+   G +      + DA  K V   K
Sbjct: 340 IRLTGTNEKEGRALL--EGTHFTVGTSMADAGHKAVELSK 377


>gi|149278396|ref|ZP_01884533.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Pedobacter sp. BAL39]
 gi|149230766|gb|EDM36148.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Pedobacter sp. BAL39]
          Length = 396

 Score =  315 bits (808), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 179/398 (44%), Positives = 240/398 (60%), Gaps = 20/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V  +V  A  A K +         V+K+QIHA     
Sbjct: 1   MNIHEYQGKEILKSFGVAVQEGIVAETVDQAVEAAKKMKTDFNSDWVVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V      ILG  L+T QTGP G +VN V V       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKERATAILGMQLVTPQTGPEGKKVNKVLVAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ASETKEFYVSVLLNRANGRNIIMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S+ EINP++   + ++  +D+K+  D+N
Sbjct: 171 KVAFNLGLSGAAFKEMVKFVTALYKAYDSTDSSMFEINPVLKTSDDKIIAVDAKVDLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RD  EED  ++EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDYAAMRDKLEEDPTDVEASESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V A F II  D +VK ILINIFGGI+RCD + +G++ A KE+  
Sbjct: 291 EPANFLDVGGTANAQTVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYKEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           I +P++ RL+G N     +LI +SGL V +AI L DAA
Sbjct: 351 IPVPIICRLQGTNAAEAKQLIDDSGLKVYSAIALKDAA 388


>gi|34557448|ref|NP_907263.1| succinyl-COA synthetase BETA chain [Wolinella succinogenes DSM
           1740]
 gi|81832991|sp|Q7M9A6|SUCC_WOLSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|34483164|emb|CAE10163.1| SUCCINYL-COA SYNTHETASE BETA CHAIN [Wolinella succinogenes]
          Length = 392

 Score =  315 bits (808), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 184/394 (46%), Positives = 251/394 (63%), Gaps = 11/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL +Y V + +G V  +   A    + L G ++ +K+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKALLAQYGVGIPRGGVAETPAEATVIAQRLGGEIWAIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + +LGS LIT QT   G  V+ VYVE+G  I RE YL
Sbjct: 58  -------GGVKLAKTPEEAGEIAKAMLGSRLITHQTSLEGKEVHKVYVEEGLGIEREYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR+  M   +AS QGG+DIEEVAK+ P +I K+ +DP+IG        L   L L 
Sbjct: 111 GIVLDRSLEMPVIMASRQGGVDIEEVAKNSPNEIIKVAVDPMIGFRPFHGRKLAFALGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D   +L++ +  KD  ++EINPL+     R   LD+KISFD+NALYRH +I 
Sbjct: 171 KEQVGLFVDFCTSLFRLYVQKDAEIVEINPLVFTSCKRFVALDAKISFDNNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+SEE+S EIEA ++NL+Y+ L GN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 AMRDLSEEESSEIEAGEYNLNYVKLQGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K V +++P+V+RL+
Sbjct: 291 GGAKPETVAKGFEIILKDPNVKAIFVNIFGGIVRCDRVANGILEAAKIVHVSVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVH 393
           G N      ++ ++ + N+  A  L+  A+K V 
Sbjct: 351 GTNAKEAKEILEQANIPNIFAAPSLEGGAKKAVE 384


>gi|147903260|ref|NP_001087509.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus laevis]
 gi|51261652|gb|AAH80033.1| MGC82958 protein [Xenopus laevis]
          Length = 458

 Score =  315 bits (808), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 169/392 (43%), Positives = 245/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL+   V + KG V  +   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 48  LSLHEYLSMDLLKNAGVAIPKGCVAKTPDEAYTVAKEIGSKDLVVKAQVLAGGRGKGTFE 107

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 108 ---GGLKGGVKIVYSPEEAKDIASQMIGKKLFTKQTGEKGRICNHVFICERRYPRREYYF 164

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S+QGG++IE+VA + P  I K  ID + G+  E    L + +   
Sbjct: 165 AIAMERAFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIIEGIKKEQAVRLAEKMGFP 224

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +   NLY  F   D +++EINP++   +G +  +D+KI+FD N+ YR  ++ 
Sbjct: 225 SNIVDEAANCMINLYNLFMKYDATMVEINPMVEDASGVVMCMDAKINFDSNSAYRQKEVF 284

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED R+ +A   +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 285 DLRDWSQEDERDRQAATADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 344

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AF++ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++++ IP+V+RL+
Sbjct: 345 GGATVHQVTEAFRLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQ 404

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI  SGL ++   DLD+AA+ +V
Sbjct: 405 GTRVDDAKALITASGLKILACDDLDEAAKMVV 436


>gi|21263966|sp|O97580|SUCB1_PIG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|3808237|gb|AAC69751.1| ATP-specific succinyl-CoA synthetase beta subunit [Sus scrofa]
          Length = 425

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 248/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 15  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 74

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 75  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 131

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 132 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 191

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 192 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 251

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 252 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 311

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 312 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 371

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 372 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 403


>gi|301767492|ref|XP_002919160.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 467

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 57  LSLHEYMSMDLLQEAGVSIPKGHVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 116

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 117 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 173

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 174 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 233

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 234 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 293

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED RE  A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 294 DLQDWTQEDERERGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 354 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 413

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI +SGL ++   DLD+AA+ +V
Sbjct: 414 GTRVDDAKALITDSGLKILACDDLDEAAKMVV 445


>gi|332667707|ref|YP_004450495.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332336521|gb|AEE53622.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 398

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 177/399 (44%), Positives = 245/399 (61%), Gaps = 22/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +L++Y V +  G+V  SV  AE+A   L   + V+K+QIHA         
Sbjct: 1   MNLHEYQGKEILQRYGVAIQTGIVAQSVAEAEAAWSQLGSGVVVIKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-----GPTGSRVNCVYVEDGA--- 112
                  GGV++  +L  V +    I+G  L T QT     GP G  V  V + + +   
Sbjct: 52  -GGRGKGGGVKLAKNLDDVKTHAGNIIGMMLRTPQTPGGMEGP-GKLVRKVLIAEDSYAP 109

Query: 113 --DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
             +  +E Y+S+L+DR       I ST+GGMDIE VA+  P+K+ K  +DP+ G      
Sbjct: 110 DFNACKEYYVSILMDREKKCNVIIYSTEGGMDIEAVAEHTPEKVQKEWVDPISGFQGFQA 169

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             +   L L G+A  +       LY AF   D SL EINP +   + R+  +D+K++ DD
Sbjct: 170 RKIAFNLGLSGKAFKEFTTFITKLYTAFVASDASLFEINPCLRTGDDRILAVDAKVTIDD 229

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NALYRH D++ +RD  EED  ++EA++  L+Y+ LDGN+GCMVNGAGLAMATMDIIKL G
Sbjct: 230 NALYRHPDLEAMRDKDEEDPTDVEAQEFELNYVKLDGNVGCMVNGAGLAMATMDIIKLSG 289

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
           G PANFLDVGG AD  +V  AFKII  D +VK ILINIFGGI+RCD + +G++ A K + 
Sbjct: 290 GEPANFLDVGGTADAARVENAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMG 349

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
            I++P+++RL+G N D+  ++I ESGL V +AI L +AA
Sbjct: 350 NISVPIIVRLQGTNADLAKKMIDESGLKVYSAIQLAEAA 388


>gi|223993443|ref|XP_002286405.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977720|gb|EED96046.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 419

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 243/394 (61%), Gaps = 6/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEY +  ++ ++ +   K  V +S   AE    T+     V+K+Q+ +GGRG G FK
Sbjct: 7   LNVHEYISMEIMNQHGIATPKNFVANSPEEAEHIFTTMMNKHVVIKAQVLSGGRGLGTFK 66

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + +           +LG  L+TKQ  P G     V + +   +  E+YL
Sbjct: 67  N---GFKGGVHMVTRKGQAAEMASSMLGQELVTKQA-PNGILCQKVLLMERMYMRNEMYL 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR SG    + S +GG  IE+VA   P+ IF   ID  +G+T E    +   + L+
Sbjct: 123 SILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLE 182

Query: 181 --GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              ++      L  NLY  F   D + +E+NPL     G + V D+K++FDDNA +R   
Sbjct: 183 EGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKS 242

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I E RD S+ED RE+EA +++L+YI LDGNIGCMVNGAGLAM+TMDII+L GG+PANFLD
Sbjct: 243 IFERRDFSQEDPREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLD 302

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA++ +V  AF+++ SD  V+ IL+NIFGGIMRCDV+  GI++A +E+ I  PLV+R
Sbjct: 303 VGGGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIR 362

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           L+G NVD   +LI   G  +I A DL+DAA+K V
Sbjct: 363 LQGTNVDAARKLIEGCGFRMILAEDLEDAAEKAV 396


>gi|114649575|ref|XP_001151014.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 4 [Pan troglodytes]
 gi|119629182|gb|EAX08777.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_c
           [Homo sapiens]
 gi|189054910|dbj|BAG37894.1| unnamed protein product [Homo sapiens]
 gi|261861562|dbj|BAI47303.1| succinate-CoA ligase, ADP-forming, beta subunit [synthetic
           construct]
 gi|311349138|gb|ADP91734.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349140|gb|ADP91735.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349142|gb|ADP91736.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349144|gb|ADP91737.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349146|gb|ADP91738.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349156|gb|ADP91743.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349162|gb|ADP91746.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349166|gb|ADP91748.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349168|gb|ADP91749.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349174|gb|ADP91752.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349176|gb|ADP91753.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349180|gb|ADP91755.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349182|gb|ADP91756.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349184|gb|ADP91757.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349186|gb|ADP91758.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349190|gb|ADP91760.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349192|gb|ADP91761.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349196|gb|ADP91763.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349198|gb|ADP91764.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349202|gb|ADP91766.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349204|gb|ADP91767.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349206|gb|ADP91768.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349208|gb|ADP91769.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349210|gb|ADP91770.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349212|gb|ADP91771.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349214|gb|ADP91772.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349216|gb|ADP91773.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
          Length = 463

 Score =  315 bits (807), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVV 441


>gi|114649579|ref|XP_509774.2| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit isoform
           5 [Pan troglodytes]
          Length = 446

 Score =  315 bits (807), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 96  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 153 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 213 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 393 GTRVDDAKALIADSGLKILACDDLDEAARMVV 424


>gi|11321583|ref|NP_003841.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           precursor [Homo sapiens]
 gi|94730427|sp|Q9P2R7|SUCB1_HUMAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Renal carcinoma
           antigen NY-REN-39; AltName: Full=Succinyl-CoA synthetase
           beta-A chain; Short=SCS-betaA; Flags: Precursor
 gi|7328935|dbj|BAA92873.1| ATP specific succinyl CoA synthetase beta subunit precursor [Homo
           sapiens]
 gi|20380655|gb|AAH27587.1| Succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
 gi|55957255|emb|CAI15149.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
 gi|311349148|gb|ADP91739.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349150|gb|ADP91740.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349152|gb|ADP91741.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349154|gb|ADP91742.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349158|gb|ADP91744.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349160|gb|ADP91745.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349164|gb|ADP91747.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349170|gb|ADP91750.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349172|gb|ADP91751.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349178|gb|ADP91754.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349188|gb|ADP91759.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349194|gb|ADP91762.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349200|gb|ADP91765.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
          Length = 463

 Score =  315 bits (807), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVV 441


>gi|194221896|ref|XP_001490027.2| PREDICTED: similar to succinate-CoA ligase, ADP-forming, beta
           subunit isoform 1 [Equus caballus]
          Length = 463

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 248/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI +SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALITDSGLKILACDDLDEAAKMVV 441


>gi|114649582|ref|XP_001150870.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 2 [Pan troglodytes]
          Length = 441

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 31  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 91  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 148 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMVV 419


>gi|91215971|ref|ZP_01252940.1| succinyl-CoA synthetase, beta subunit [Psychroflexus torquis ATCC
           700755]
 gi|91185948|gb|EAS72322.1| succinyl-CoA synthetase, beta subunit [Psychroflexus torquis ATCC
           700755]
          Length = 397

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 172/402 (42%), Positives = 245/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + KG++  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVGIQKGILSKTPKEAVEAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGVR+  +LK V     EILG  L+T QT   G  V+ V + +     G
Sbjct: 56  -----GGRGKGGGVRLAKNLKEVEQIAEEILGMHLVTPQTSKEGKEVHQVLITEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +   E Y+S+L++R +G    + S +GG+DIE VA++ P+KIF   IDP  G+      
Sbjct: 111 DNEPEEYYMSVLLNRATGRNMIMYSPEGGVDIESVAENTPEKIFTEEIDPATGILPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +     L+G+A  +      +LYKA+   D SL EINP++   + R+  +D+K++ DD+
Sbjct: 171 KIAFNFGLEGKAFKEMTKFVTSLYKAYEGCDSSLFEINPVLKTSDDRIIAVDAKVTLDDS 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D Q +RD  EED  E+EA++  LSY+ LDGN+GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALFRHKDYQNMRDTREEDPTEVEAREAGLSYVNLDGNVGCMVNGAGLAMATMDLIKFAGA 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AFK+I  D  V+ ILINIFGGI+RCD + KGI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEQAFKLILKDKKVEAILINIFGGIVRCDRVAKGIIEAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +IN+P+++RL+G N +   +LI E+G+NV TA+   +AA K+
Sbjct: 351 QINVPIIVRLQGTNAEEAVKLINEAGINVETAVQFKEAADKV 392


>gi|24645208|ref|NP_649846.2| skpA associated protein, isoform A [Drosophila melanogaster]
 gi|161078106|ref|NP_001097713.1| skpA associated protein, isoform B [Drosophila melanogaster]
 gi|23170752|gb|AAF54308.2| skpA associated protein, isoform A [Drosophila melanogaster]
 gi|158030193|gb|ABW08624.1| skpA associated protein, isoform B [Drosophila melanogaster]
          Length = 502

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 235/393 (59%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVH 427


>gi|3766197|gb|AAC64396.1| ATP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
          Length = 426

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 16  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 76  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 132

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 133 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 192

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 193 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 252

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 253 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 312

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 313 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 372

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 373 GTRVDDAKALIADSGLKILACDDLDEAARMVV 404


>gi|55957259|emb|CAI15153.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
          Length = 441

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 31  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 91  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 148 AITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMVV 419


>gi|7023369|dbj|BAA91939.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 172/392 (43%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ + K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAVIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVV 441


>gi|195499264|ref|XP_002096876.1| GE25915 [Drosophila yakuba]
 gi|194182977|gb|EDW96588.1| GE25915 [Drosophila yakuba]
          Length = 503

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 235/393 (59%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVH 427


>gi|325854971|ref|ZP_08171687.1| succinate-CoA ligase, beta subunit [Prevotella denticola CRIS
           18C-A]
 gi|327313355|ref|YP_004328792.1| succinate-CoA ligase subunit beta [Prevotella denticola F0289]
 gi|325483949|gb|EGC86889.1| succinate-CoA ligase, beta subunit [Prevotella denticola CRIS
           18C-A]
 gi|326944255|gb|AEA20140.1| succinate-CoA ligase, beta subunit [Prevotella denticola F0289]
          Length = 379

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/400 (43%), Positives = 242/400 (60%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + +V  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIVCKTPEEAVAAYKQLGVEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGNNEAEIRQHAEAILGMNI-------KGFVVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP++G++     E    L D 
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVVGMSDYLAREAAFKLFDN 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      +F N+Y+ F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH
Sbjct: 164 MAQVKQAV----PIFKNIYRLFTEKDASLAEINPLVMLKDGTLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + + E+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVAELFEPTAEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K +K +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDGHVKVVLINIFGGITRCDDVANGLLEAFKVIKTDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  ++   G +      + DA  K V   K
Sbjct: 340 IRLTGTNEAEGRAIL--EGTHFTVGTSMADAGHKAVELSK 377


>gi|320542548|ref|NP_001189197.1| skpA associated protein, isoform E [Drosophila melanogaster]
 gi|320542550|ref|NP_001189198.1| skpA associated protein, isoform F [Drosophila melanogaster]
 gi|318068741|gb|ADV37288.1| skpA associated protein, isoform E [Drosophila melanogaster]
 gi|318068742|gb|ADV37289.1| skpA associated protein, isoform F [Drosophila melanogaster]
          Length = 452

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 179/394 (45%), Positives = 237/394 (60%), Gaps = 4/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII-MKNGRLRVLDSKISFDDNALYRHLDI 239
           G        +  NLY  F  KD  L+EINP      +G    LD+K+ FDDNA +R  ++
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKEL 274

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 275 FALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDV 334

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL
Sbjct: 335 GGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRL 394

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 QGTKVKEARELIRTSGLKILARDDLDKAADLAVH 428


>gi|34364605|emb|CAE45708.1| hypothetical protein [Homo sapiens]
          Length = 472

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 62  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 121

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 122 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 178

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 179 AITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 238

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 239 PYIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 298

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 299 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 358

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 359 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 418

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 419 GTRVDDAKALIADSGLKILACDDLDEAARMVV 450


>gi|332841274|ref|XP_001150944.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 3 [Pan troglodytes]
          Length = 482

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 72  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 131

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 132 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 188

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 189 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 248

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 249 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 308

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 309 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 368

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 369 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 428

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 429 GTRVDDAKALIADSGLKILACDDLDEAARMVV 460


>gi|326474990|gb|EGD98999.1| succinyl-CoA ligase beta-chain [Trichophyton tonsurans CBS 112818]
 gi|326483203|gb|EGE07213.1| succinyl-CoA ligase beta-chain [Trichophyton equinum CBS 127.97]
          Length = 415

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/382 (44%), Positives = 238/382 (62%), Gaps = 3/382 (0%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F       KGGVRV  
Sbjct: 19  YGVGVPKGEVARSGEEAEAIAKNIGGEDMVIKAQVLAGGRGKGTFDN---GLKGGVRVIY 75

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S         +++G  LITKQTG  G   N VY+ +     RE YL++L+DR +     +
Sbjct: 76  SPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIV 135

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
           +S+QGGMDIE VAKD P  I    ID   GVT +   ++   L    Q   +  +    L
Sbjct: 136 SSSQGGMDIEAVAKDTPDAITTTPIDIHTGVTDQIARNIATGLGFSEQCVPEAVETIKKL 195

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           YK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++   RD ++ED+ E++
Sbjct: 196 YKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVFSWRDTTQEDADEVK 255

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVGGGA    + +AF++
Sbjct: 256 AAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVGGGATPAAIRSAFEL 315

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+G N++  + LI+ES
Sbjct: 316 ITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQGTNMEKAHALISES 375

Query: 375 GLNVITAIDLDDAAQKIVHAVK 396
           GL + +  DL  AA+K V   K
Sbjct: 376 GLKIFSIEDLQVAAEKSVQFSK 397


>gi|281361395|ref|NP_001163558.1| skpA associated protein, isoform C [Drosophila melanogaster]
 gi|281361397|ref|NP_001163559.1| skpA associated protein, isoform D [Drosophila melanogaster]
 gi|16197833|gb|AAL13560.1| GH10480p [Drosophila melanogaster]
 gi|272476881|gb|ACZ94855.1| skpA associated protein, isoform C [Drosophila melanogaster]
 gi|272476882|gb|ACZ94856.1| skpA associated protein, isoform D [Drosophila melanogaster]
          Length = 503

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 179/394 (45%), Positives = 237/394 (60%), Gaps = 4/394 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII-MKNGRLRVLDSKISFDDNALYRHLDI 239
           G        +  NLY  F  KD  L+EINP      +G    LD+K+ FDDNA +R  ++
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKEL 274

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 275 FALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDV 334

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL
Sbjct: 335 GGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRL 394

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 QGTKVKEARELIRTSGLKILARDDLDKAADLAVH 428


>gi|126336285|ref|XP_001372226.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 476

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/395 (43%), Positives = 240/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V  + + A +A K L     V+K+QI AGGRGKG F 
Sbjct: 82  LNLQEYQSKKLMSEHGVKVQRFFVADTANDALNAAKRLNAKEIVLKAQILAGGRGKGTFN 141

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V + +  DI RE YL
Sbjct: 142 ---SGLKGGVHLTKDPKVVGQLAQQMIGYNLTTKQTPKDGVKVNKVMIAEALDISRETYL 198

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L  +
Sbjct: 199 AILMDRSCNGPVLVGSPQGGVDIEEVAATTPELIFKEEIDIFEGIKDSQAERMAENLGFR 258

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 259 GALKTQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 318

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 319 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 378

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 379 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPLVVRLE 438

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A DL+DAA+K V +V
Sbjct: 439 GTNVQEAQNILNNSGLPITSASDLEDAAKKAVASV 473


>gi|197098544|ref|NP_001124678.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Pongo abelii]
 gi|55725384|emb|CAH89556.1| hypothetical protein [Pongo abelii]
 gi|55731598|emb|CAH92506.1| hypothetical protein [Pongo abelii]
          Length = 463

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 172/392 (43%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALHLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PTIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVV 441


>gi|194903565|ref|XP_001980893.1| GG13653 [Drosophila erecta]
 gi|190652596|gb|EDV49851.1| GG13653 [Drosophila erecta]
          Length = 505

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 177/393 (45%), Positives = 235/393 (59%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+T+E    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTTEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLMNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVH 427


>gi|226480678|emb|CAX73436.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit [Schistosoma
           japonicum]
          Length = 434

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/394 (43%), Positives = 248/394 (62%), Gaps = 11/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK----TLPGPLYVVKSQIHAGGRGK 56
           + +HEY A  LL+KY +PV K VV+ S+   ++A K    T      V+K+Q+ AGGRGK
Sbjct: 22  LKVHEYLALGLLKKYEIPVPKFVVVRSIDEVKAACKEFGETTESTDVVLKAQVLAGGRGK 81

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G +    +  KGGV++  S+   IS    +LG  + T QTG +G   N +   +     R
Sbjct: 82  GIWD---SGLKGGVKIVYSVDEAISVANRMLGHRIFTAQTGDSGQLCNTLLACERKYSRR 138

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL++++DR+SG    +   QGG++IE++A+D P  + K+ ID   G+  +D   +   
Sbjct: 139 EHYLAIVLDRSSGGPVMVGCKQGGVNIEDIARDNPDALIKIPIDIDKGLDKKDAVMMAHK 198

Query: 177 LELQGQARIDGGDLF-PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           L   G +  D   ++   LYK F   D +LLEINP+    NG +  +D K++FDDNA +R
Sbjct: 199 L---GFSHSDEAAVYIERLYKLFDSTDCTLLEINPISQDINGHVICMDCKMNFDDNAAFR 255

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             +I   RD S+ED R+++A    L+YI LDGNIGC+VNGAGLAMATMD+I+L+GG PAN
Sbjct: 256 QKEIFAQRDWSQEDERDVKATNAGLNYIGLDGNIGCLVNGAGLAMATMDLIQLHGGNPAN 315

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA   +V  AF++ITSD  V  IL+NIFGGIMRCD++ +GI++A  E+ I +P+
Sbjct: 316 FLDVGGGATATQVTEAFRLITSDPKVNAILVNIFGGIMRCDIIAQGIVAAATELNIKVPI 375

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           ++RL+G  V+    +IA S + ++   DLD+AA 
Sbjct: 376 IVRLQGTRVEDAKAIIATSHMKILGCSDLDEAAH 409


>gi|331222831|ref|XP_003324089.1| succinyl-CoA ligase beta-chain [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309303079|gb|EFP79670.1| succinyl-CoA ligase beta-chain [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 419

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 241/386 (62%), Gaps = 4/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL +Y +P        +   A    ++   P+ V+K+Q+ AGGRGKG F 
Sbjct: 28  LSIHEYMSMGLLNEYGIPTPISKAAKTPQEAHKIAESFGKPM-VIKAQVLAGGRGKGHF- 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV++  + +  +   ++++G  LITKQTG  G   N V + +  +   E Y+
Sbjct: 86  EGKDGLKGGVQMVDTPEQALQYAKQMIGHKLITKQTGAAGRICNAVMLAEKREPSHEYYV 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR+    A +AS QGGM+IEEVA   P  I    ID   G++ ++   +   L ++
Sbjct: 146 AILNDRSLNGPALVASAQGGMNIEEVAAKDPSAIHTFPIDFQKGLSKQEGVEIAKTLGIK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F NLY+ F DKD + +EINPL   K+G +  +D+K+ FD+NA +R   + 
Sbjct: 206 DHSA--AADIFINLYRLFKDKDATQIEINPLAETKDGAVLCMDAKLGFDENAEFRQEKVF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED  E+EA ++ L+ I LDGNIGC+VNGAGLAMATMD++KL GG PANFLDVG
Sbjct: 264 QLRDRSQEDPTEVEAAEYGLNLIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF++ITSD  VK I +NIFGGIMRCDV+ +GI+ A  E+ ++IPL++RL+
Sbjct: 324 GGATAEAVKKAFELITSDKGVKSIFVNIFGGIMRCDVIAEGIIKATNELSLDIPLIVRLQ 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G       +LI ES + +     LD+
Sbjct: 384 GTKEKEAKKLIKESKMKIFAFDGLDE 409


>gi|170039565|ref|XP_001847601.1| succinyl-coa synthetase beta chain [Culex quinquefasciatus]
 gi|167863119|gb|EDS26502.1| succinyl-coa synthetase beta chain [Culex quinquefasciatus]
          Length = 446

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 175/393 (44%), Positives = 241/393 (61%), Gaps = 4/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + + L +  +P  K  V +S   AE   K L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYSFLNEAGIPTPKFGVATSAQEAEKIAKDLNTKNLVLKAQVLAGGRGKGTFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S K   +   +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPKEAQAIGGKMINQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+      ++   + L+
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDIKAGLQKNQALAIAKKVGLE 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   +  N+Y  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 210 DHAE-ETAKMLLNMYDLFVKKDALLIEINPYAEDAGETYFALDAKMRFDDNAEFRQKELF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+ED +E+EA + +L+YIALDG+IGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 AKRDLSQEDKKEVEASKFDLNYIALDGSIGCMVNGAGLAMATMDIIKLHGGDPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AFKIITSD  V  IL+NIFGGIMRCDV+ +GI+ A +E+ I +P+++RL+
Sbjct: 329 GGATVNAVREAFKIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATRELNIKMPIIVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+    LI +S L ++   DLD+AA   VH
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAMLSVH 421


>gi|291237501|ref|XP_002738684.1| PREDICTED: GTP-specific succinyl-CoA synthetase, beta subunit,
           putative-like [Saccoglossus kowalevskii]
          Length = 389

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 168/363 (46%), Positives = 229/363 (63%), Gaps = 4/363 (1%)

Query: 31  AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGST 90
           A+  + T+   L VVK+QI AGGRGKG+F    +  +GGV + +    V S I+++LG T
Sbjct: 24  AQELLNTIASEL-VVKAQILAGGRGKGKFS---SGLQGGVHLTTKADEVSSLIKKMLGHT 79

Query: 91  LITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDY 150
           L TKQTG  G  V  V + +  DI RE Y ++L+DRT      + S  GG+DIEEVAK+ 
Sbjct: 80  LTTKQTGKDGVIVKKVMIAEALDIERETYFAILMDRTFDGPVMVGSPAGGVDIEEVAKNS 139

Query: 151 PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           P  IFK  ID  +G+T +    +   L+   + R +      NLYK F   D + +EINP
Sbjct: 140 PDLIFKKPIDITVGITEDMALDMAANLDFDAEKRTEAARQIQNLYKLFIGVDATQVEINP 199

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
                +GR+   D+K++FDDN+ +R   +  + D SE D RE  A    L+Y+ +DGNIG
Sbjct: 200 FGETPDGRVVCFDAKMNFDDNSEFRQKQVFSMDDESETDPRETRAAACGLNYVGMDGNIG 259

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
           C+VNGAGLAMATMDII LYGG PANFLDVGGG  + +V  A  IITSD  VK ILINIFG
Sbjct: 260 CLVNGAGLAMATMDIIDLYGGHPANFLDVGGGVQEHQVVEAIDIITSDPQVKAILINIFG 319

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           GI+ C  +  G+++A++ +K+ +PLV+RL G NVD   +++  S L +++A DLDDAAQK
Sbjct: 320 GIVNCATVANGLITALQGIKLEVPLVVRLAGTNVDAARQILDNSNLPIVSASDLDDAAQK 379

Query: 391 IVH 393
            V 
Sbjct: 380 AVE 382


>gi|114649573|ref|XP_001150493.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit isoform
           1 [Pan troglodytes]
          Length = 451

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 172/391 (43%), Positives = 245/391 (62%), Gaps = 3/391 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G  VD    LIA+SGL ++   DLD+AA+ +
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440


>gi|86132927|ref|ZP_01051518.1| Succinyl-CoA synthetase, beta subunit [Dokdonia donghaensis MED134]
 gi|85816633|gb|EAQ37820.1| Succinyl-CoA synthetase, beta subunit [Dokdonia donghaensis MED134]
          Length = 396

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 175/401 (43%), Positives = 245/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILNSFGVRIQRGYVAQTPDEAVAAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL  V +   +I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLDEVKTIADQIIGMDLVTPQTSAEGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRGTGRNMIMYSTEGGMDIETVAEETPHLIFHEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+ D D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGAAFKDMTKFVAALYKAYTDSDSSLFEINPVLKTSDDKIMAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR  D   +RD  EE+  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRRKDYAAMRDKREENQVEVEAGEKGLNYVDLDGNVGCMVNGAGLAMATMDLIKQSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD ++V AAF++I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVEAAFQLILKDPAVKAILVNIFGGIVRCDRVAQGIIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI  +LI +SGL+V +AI+  +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKKLIDDSGLDVQSAIEFKEAADKV 391


>gi|319951907|ref|YP_004163174.1| succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga
           algicola DSM 14237]
 gi|319420567|gb|ADV47676.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga
           algicola DSM 14237]
          Length = 396

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 173/401 (43%), Positives = 247/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHTAKEAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V     +I+G TLIT QT   G +V+ + V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVEEIAGQIIGMTLITPQTSAEGKKVHQILVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L++R +G    + ST+GGMDIEEVA++ P  IF   IDP  G+      
Sbjct: 111 ASETKEFYMSVLLNRGTGRNMIMYSTEGGMDIEEVAENTPHLIFTEEIDPGTGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D S+ EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGTAFKEMTKFVASLYKAYDESDSSMFEINPVLKTSDDKIMAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+R     E+RD+ EE++ E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRRKQYAEMRDLREENAIEVEAGALGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V AAFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVEAAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N D+   LI  SGL+V +A+   +AA K+
Sbjct: 351 INVPIIVRLQGTNADLAKELIDNSGLDVQSAVQFQEAADKV 391


>gi|224535692|ref|ZP_03676231.1| hypothetical protein BACCELL_00556 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522692|gb|EEF91797.1| hypothetical protein BACCELL_00556 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 382

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 169/397 (42%), Positives = 238/397 (59%), Gaps = 18/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +Y +PV + V+ ++   A  A + L     VVK+Q+  GGRGK    
Sbjct: 1   MKVHEYQAKEIFSQYGIPVERHVLCNTPDEAVKAFRQLEVDKVVVKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    REIL  T+        G  V  + + +  DI  E Y+
Sbjct: 58  -------GGVKLADNEELVRQHAREILKMTI-------KGFPVTRILISEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  I S  GGMDIEEVA++ P+KI +  IDPLIG+      S   ML  Q
Sbjct: 104 SFTIDRNTRSVVLIMSAAGGMDIEEVARNTPEKIIRYNIDPLIGLPQYLAQSFAFMLFDQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LYKAF + D SL EINPL++   G L  +D+K+ FDDNALYRH DI 
Sbjct: 164 AEQARRMTSILQDLYKAFMENDASLAEINPLVLTAKGTLTAIDAKMVFDDNALYRHPDIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + + E+  E  AK+   SY+ +DG+IGCMVNGAGLAM TMD+IKLYGG+PANFLD+G
Sbjct: 224 ALFEPTPEEQLEATAKERGFSYVRMDGDIGCMVNGAGLAMTTMDMIKLYGGSPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A KI+ +DS VK + INIFGGI RCD +  G++ A  +++  IP+++RL 
Sbjct: 284 GSSNPVKVIEAMKILLNDSKVKAVFINIFGGITRCDDVAIGLIQAFDQLQTEIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +L+ +S      A  +++A   +V +VKG
Sbjct: 344 GTNENIGRKLLKDSN-RFQVAETMNEATLMVVKSVKG 379


>gi|291408934|ref|XP_002720765.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit
           [Oryctolagus cuniculus]
          Length = 463

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 247/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGFVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V + +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLICERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 170 AIAMERSFQGPVLIGSSQGGVNIEDVAAETPDAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    L+  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVDSAAENMVKLFNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVV 441


>gi|281349742|gb|EFB25326.1| hypothetical protein PANDA_007758 [Ailuropoda melanoleuca]
          Length = 413

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 172/391 (43%), Positives = 245/391 (62%), Gaps = 3/391 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 23  LSLHEYMSMDLLQEAGVSIPKGHVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 83  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 140 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 200 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED RE  A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 260 DLQDWTQEDERERGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 320 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G  VD    LI +SGL ++   DLD+AA+ +
Sbjct: 380 GTRVDDAKALITDSGLKILACDDLDEAAKMV 410


>gi|148666929|gb|EDK99345.1| mCG127318 [Mus musculus]
          Length = 466

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 237/392 (60%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 99  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV     ++  SGL + +A+DL+DAA+K V
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLEDAAKKAV 427


>gi|195330554|ref|XP_002031968.1| GM23771 [Drosophila sechellia]
 gi|194120911|gb|EDW42954.1| GM23771 [Drosophila sechellia]
          Length = 502

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 178/393 (45%), Positives = 235/393 (59%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSGKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V     LI  SGL ++   DLD AA   VH
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVH 427


>gi|7022728|dbj|BAA91703.1| unnamed protein product [Homo sapiens]
          Length = 441

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 172/392 (43%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 31  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 91  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 148 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+V+GAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVSGAGLAMATMDIIKLHGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMVV 419


>gi|332521818|ref|ZP_08398269.1| succinyl-CoA synthetase, beta subunit [Lacinutrix algicola
           5H-3-7-4]
 gi|332042648|gb|EGI78849.1| succinyl-CoA synthetase, beta subunit [Lacinutrix algicola
           5H-3-7-4]
          Length = 397

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 175/402 (43%), Positives = 244/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K LL  + V + +G+V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKELLSSFGVRIQRGIVAQNADEAVTAAKKLTEDTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V S   +I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKSIANDIIGMDLVTPQTSAEGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRGTGRNMIMYSTEGGMDIETVAEETPHLIFTEEIDPATGILPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D      +LY A+   D SL EINP++   + ++  +D+K++ D N
Sbjct: 171 KVAFNLGLSGAAFKDMTKFVTSLYTAYVKSDSSLFEINPVLKTSDDKIMAVDAKVTLDAN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ ELRD+ EE   E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHKDLAELRDIREESPIEVEAGELGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEAAFRIILKDPAVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            IN+P+++RL+G N DI   LI  SGL+V++A +  +AA K+
Sbjct: 351 AINVPIIVRLQGTNADIAKELIDSSGLDVMSATEFQEAADKV 392


>gi|332292722|ref|YP_004431331.1| succinyl-CoA synthetase, beta subunit [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170808|gb|AEE20063.1| succinyl-CoA synthetase, beta subunit [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 396

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 175/401 (43%), Positives = 245/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G V  +    V AAE   +      +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILNSFGVRIQRGYVAQTPDEAVAAAERLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL  V S   +I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLDEVRSIADQIIGMDLVTPQTSAEGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRGTGRNMIMYSTEGGMDIETVAEETPHLIFHEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+ D D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGAAFKDMTKFVAALYKAYTDSDSSLFEINPVLKTSDDKIMAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR  +   +RD  EE+  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRRKEYAAMRDKREENQVEVEAGEKGLNYVDLDGNVGCMVNGAGLAMATMDLIKQSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD ++V AAF++I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVEAAFQLILKDPAVKAILVNIFGGIVRCDRVAQGIIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI  +LI +SGL+V +AI+  +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKKLIDDSGLDVQSAIEFQEAADKV 391


>gi|241958942|ref|XP_002422190.1| succinyl-CoA ligase, beta subunit, mitochondrial precursor,
           putative; succinyl-CoA synthetase beta chain, putative
           [Candida dubliniensis CD36]
 gi|223645535|emb|CAX40194.1| succinyl-CoA ligase, beta subunit, mitochondrial precursor,
           putative [Candida dubliniensis CD36]
          Length = 415

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 169/395 (42%), Positives = 237/395 (60%), Gaps = 7/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y VP+ KG   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLSEYGVPIPKGYPATTPEGAYDAAKKLGTNELVIKAQALTGGRGKGHF- 78

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E 
Sbjct: 79  ----DSGLQGGVKLISSAEEAKDLASQMLNHKLITKQTGAAGKEVTAVYIVERRDAASEA 134

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++L+DR       +AS QGGMDIE VA   P  I    +    GV+      +   L 
Sbjct: 135 YVAILMDRARQTPVIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEGVSDSLATEIAGALG 194

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               A  +      +LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  +
Sbjct: 195 FTQDAIPEAAKTIQSLYKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEE 254

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD ++ED +E EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD
Sbjct: 255 VFSWRDPTQEDPQEAEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLD 314

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GG A  + +  AF++I SD  V GI +NIFGGI+RCD + KG+++A K  K++IP+V+R
Sbjct: 315 CGGTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVAKGLIAATKNFKLDIPVVVR 374

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G N+     LI  SGL +    DLD AA+KIV 
Sbjct: 375 LQGTNLAEAKELIENSGLKLYAFEDLDPAAEKIVQ 409


>gi|109120691|ref|XP_001100026.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 5 [Macaca mulatta]
          Length = 463

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 245/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I    ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A Q NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI++A+K+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
              VD    LIA SGL ++   DLD+AA+ +V
Sbjct: 410 XTRVDDAKALIAGSGLKILACDDLDEAARMVV 441


>gi|109120695|ref|XP_001099529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 1 [Macaca mulatta]
          Length = 446

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 245/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 96  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I    ID   G+  E    L   +   
Sbjct: 153 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 213 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A Q NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI++A+K+++I IP+V+RL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
              VD    LIA SGL ++   DLD+AA+ +V
Sbjct: 393 XTRVDDAKALIAGSGLKILACDDLDEAARMVV 424


>gi|75075886|sp|Q4R517|SUCB1_MACFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|67970932|dbj|BAE01808.1| unnamed protein product [Macaca fascicularis]
          Length = 463

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 245/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I    ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A Q NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIM CDV+ +GI++A+K+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMSCDVIAQGIVTALKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMVV 441


>gi|194221148|ref|XP_001495054.2| PREDICTED: succinate-CoA ligase, GDP-forming, beta subunit [Equus
           caballus]
          Length = 447

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 172/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 53  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKKLNAKEIVLKAQILAGGRGKGVFS 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 113 ---SGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 170 AILMDRASNGPVLVGSPQGGVDIEEVAATNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 230 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 290 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 350 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 410 GTNVHEAQNILNNSGLPITSAVDLEDAAKKAVASV 444


>gi|221060124|ref|XP_002260707.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
           knowlesi strain H]
 gi|193810781|emb|CAQ42679.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
           knowlesi strain H]
          Length = 461

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 165/396 (41%), Positives = 248/396 (62%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPL-YVVKSQIHAGGRGK 56
           ++IHEY +  LLRK  +P A+G    +          +++L G +  V+K+QI +GGRG 
Sbjct: 49  LSIHEYLSIDLLRKNMIPCAQGYAAKTPEEAEEKALELQSLCGDVDLVIKAQILSGGRGV 108

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   + +GGV +  +   V     ++L +TL+TKQTG  G + N V++ +   I +
Sbjct: 109 GYFKE--NNFEGGVHICRNSTEVKEIASKMLNNTLVTKQTGEEGKKCNTVFICERFYIRK 166

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR+S  +  + S+ GG  IEE++K  P+ I K+ ID   G ++      C+ 
Sbjct: 167 ERYVAFLLDRSSDGIVLLGSSMGGSSIEEISKKNPEAIHKMNIDVQNGFSTGQAREFCEN 226

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +        D+  NLYK F   D +LLEINP     +GR+   D+K++FDDNA YR 
Sbjct: 227 IGFKNTELDIATDIIANLYKIFKRYDCTLLEINPFSETNDGRVLCCDAKLNFDDNAEYRQ 286

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD+S+E++ EI+AK+ NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 287 KEIFLQRDLSQENAEEIQAKKFNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNF 346

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +D++  A +II +++  K   INI GGIMRCD++ +GI+ A K+     PL+
Sbjct: 347 LDVGGGATEDEITEALRIINNNAKAKVCFINILGGIMRCDIIARGIIKAFKDTAFTKPLI 406

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RLEG N D    L+ +SG+  I   D++ AAQK V
Sbjct: 407 VRLEGTNQDEAEELLRQSGIKCIFCQDMNLAAQKSV 442


>gi|296189298|ref|XP_002742721.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Callithrix jacchus]
          Length = 446

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 246/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYMSMELLQEAGVSIPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 96  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 153 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIVEGIKKEQALRLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 213 PNIVDSAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    L A+SGL ++   DLD+AA+ +V
Sbjct: 393 GTRVDDAKALRADSGLKILACDDLDEAARMVV 424


>gi|115496292|ref|NP_001068961.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Bos
           taurus]
 gi|122144544|sp|Q148D5|SUCB1_BOVIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|109939816|gb|AAI18444.1| Succinate-CoA ligase, ADP-forming, beta subunit [Bos taurus]
          Length = 463

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 247/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 ASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 441


>gi|289740029|gb|ADD18762.1| succinyl-CoA synthetase beta subunit [Glossina morsitans morsitans]
          Length = 452

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 176/396 (44%), Positives = 239/396 (60%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL    +P  K  V +S   A+     L     V+K+Q+ AGGRG G FK
Sbjct: 39  LNVQEHVSYKLLNDAGIPTPKFGVATSGSEAKDIATGLKTNNLVLKAQVLAGGRGVGHFK 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  + +   +   +++   L+TKQTGP G     V V +     RE Y+
Sbjct: 99  N---GLKGGVRIVHTPEEAETLAGKMVNQLLVTKQTGPAGRICKKVMVAERKFPRREFYV 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P+ I    ID   G+T E    +   + + 
Sbjct: 156 AVMMERAFNGPVIIASSQGGVNIEEVAAENPEAIIYEPIDIKQGLTKEQAKKVAQAIGVG 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L  N+YK F  KD  L+EINP           LD+K  FDD+A YR  ++ 
Sbjct: 216 AAHEEKTIQLLENMYKLFVQKDALLIEINPYAEDAMDGFFALDAKFRFDDSAEYRQKELF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA + +L++IALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 276 ALRDWTQEDPKEVEAAKFDLNFIALDGTIGCMVNGAGLAMATMDIIKLYGGDPANFLDVG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSD  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P+V+RL+
Sbjct: 336 GGATAQAVKEAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIIAAAKELNMQMPIVVRLQ 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+    LI +SGL +I   DLD+AA   VH  K
Sbjct: 396 GTNVNEARELIRKSGLRIIPRHDLDEAANLAVHLAK 431


>gi|328854652|gb|EGG03783.1| hypothetical protein MELLADRAFT_89885 [Melampsora larici-populina
           98AG31]
          Length = 418

 Score =  312 bits (799), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 169/386 (43%), Positives = 240/386 (62%), Gaps = 4/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL +Y +P            A + +K    P+ V+K+Q+ AGGRGKG F 
Sbjct: 27  LSIHEYLSMGLLNEYGIPTPASKAAKDPQEAYNIVKQAGKPM-VIKAQVLAGGRGKGHF- 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   KGGV++  S         ++LG  LITKQTG  G   N V + +  +   E Y+
Sbjct: 85  EGPNGLKGGVQMVDSPDQARDFAAQMLGQKLITKQTGAGGRICNAVMLAEKREPSHEYYV 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR+    A +AS+QGGM+IEEVA   P  I    ID   G+T      +   L ++
Sbjct: 145 AILNDRSLNGPALVASSQGGMNIEEVAAKDPSAILTYPIDFHNGLTQTQGIEVAKKLGIK 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A     D+F  LYK F DKD + +EINPL   K+G +  +D+K+ FD+NA +R  ++ 
Sbjct: 205 DEAA--AADIFIKLYKLFKDKDATQIEINPLAETKDGAVLCMDAKLGFDENAEFRQAEVF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED  E+EA ++ L+ I LDGNIGC+VNGAGLAMATMD++KL GG PANFLDVG
Sbjct: 263 KLRDRSQEDPTEVEAAEYGLNLIKLDGNIGCLVNGAGLAMATMDVLKLAGGNPANFLDVG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF++ITSD  VK I +NIFGGIMRCDV+ +GI+ A  E+ ++IPL++RL+
Sbjct: 323 GGATAEAVKKAFELITSDKGVKSIFVNIFGGIMRCDVIAEGIIRATNELSLDIPLIVRLQ 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G       +LI ++ + +    +LD+
Sbjct: 383 GTKEKEAKQLIKDAKMKIFAFDELDE 408


>gi|90109555|pdb|2FP4|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase In Complex With Gtp
 gi|90109573|pdb|2FPG|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase In Complex With Gdp
 gi|90109575|pdb|2FPI|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase From Polyethylene Glycol
 gi|90109583|pdb|2FPP|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase From Polyethylene Glycol With Chloride Ions
          Length = 395

 Score =  312 bits (799), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 171/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 1   MNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 61  ---SGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 118 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 178 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 238 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 298 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 358 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 392


>gi|47219005|emb|CAG02043.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 431

 Score =  312 bits (799), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 174/399 (43%), Positives = 240/399 (60%), Gaps = 9/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+++  V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMQESGVAVQRFYVADTASDALEAAKKLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADS--KGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
               DS  KGGV +     +V+ D+  ++LG  L TKQT   G +V  V V +  DI RE
Sbjct: 97  ----DSGLKGGVHLTKD-PAVVGDLASKMLGFNLTTKQTPQEGVKVKTVMVAEALDISRE 151

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y ++L+DR+      + S QGG+DIEEVA   P+ IFK +ID   GV  +    +   L
Sbjct: 152 TYFAILMDRSYNGPVMVGSPQGGVDIEEVAASNPELIFKEVIDIFEGVRDDQALRMAVNL 211

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  
Sbjct: 212 GFKGVLQRQAADQIKRLYDLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+  + D+SE D  E EA +  L YI +DGNI C VNGAGLAMAT DII L+GG PANFL
Sbjct: 272 DVFAMDDMSESDPTETEAAKWGLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 331

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  + +V  AFK++ +D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+
Sbjct: 332 DLGGGVQERQVYEAFKLLNADPKVEAILVNIFGGIVNCAIIANGITKACRELQLKVPLVV 391

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RLEG NV    R++ ESGL +  A DLDDAA K V A++
Sbjct: 392 RLEGTNVHEAKRILRESGLPITAAEDLDDAAMKAVAAIR 430


>gi|296481810|gb|DAA23925.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Bos
           taurus]
          Length = 463

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 247/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 ASIVDSAAENMIKLYDLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVV 441


>gi|300776162|ref|ZP_07086021.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC
           35910]
 gi|300505295|gb|EFK36434.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC
           35910]
          Length = 396

 Score =  311 bits (798), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 172/401 (42%), Positives = 246/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           MN+HEYQ+K +L KY V + +G V ++V  A +A + L        +VVK+QIHA     
Sbjct: 1   MNLHEYQSKEILSKYGVAIQRGFVANNVDEAVAAAEKLTAETGAQGWVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV+   ++  +  + + I+G  L+T QT   G +VN V + +     G
Sbjct: 56  -----GGRGKGGGVKFSPNMDKLKENAQNIIGMQLVTPQTSAEGKKVNSVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L+DR  G    + ST+GGMDIE VA+  P  I K +IDP +G+      
Sbjct: 111 ETETKEFYVSILLDRAEGKNTIVYSTEGGMDIEHVAEVTPHLIHKEIIDPALGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G A  +      +LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLEGNAFKEFVKFIGSLYNAYTGIDASLFEINPVLKTSDNKIIAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           +L+RH D+ ELRD  EED  ++EA +  L+++ LDGN+ CMVNGAGLAMATMDIIKL GG
Sbjct: 231 SLFRHKDLAELRDTREEDPMDVEAGEAGLNFVKLDGNVACMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V  AF II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 NPANFLDVGGTADAQRVQTAFGIILRDPNVKAILINIFGGIVRCDRVAQGVVDAYKAMGS 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +PL++RL+G N     +LI ESGL V +AI L++AA K+
Sbjct: 351 LPVPLIVRLQGTNAVEAKKLIDESGLPVHSAITLEEAANKV 391


>gi|156392365|ref|XP_001636019.1| predicted protein [Nematostella vectensis]
 gi|156223118|gb|EDO43956.1| predicted protein [Nematostella vectensis]
          Length = 435

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 170/381 (44%), Positives = 237/381 (62%), Gaps = 7/381 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L++   + V + +V  +   +    K L    YV+K+QI AGGRGKG F 
Sbjct: 42  LNLQEYQSKKLMQDNGLNVQRFIVAENPEESVRLSKKLNAAEYVIKAQILAGGRGKGTF- 100

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS   GGV +      V     ++ G  L TKQT P G  VN V V +  DI RE 
Sbjct: 101 ----DSGLNGGVHLTKLADEVGYFTAKMFGYRLKTKQTPPEGVMVNKVMVAEAYDIERET 156

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR       +AS +GGMDIEEVAK  P+ I+K+ +D   G+  +D + L + LE
Sbjct: 157 YLAILMDREFMGPVIVASPKGGMDIEEVAKTTPEYIYKVPVDITKGLQDKDASWLAEKLE 216

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G+      +    LY  F   D + +EINP     +G++   D+K +FDDNA YR   
Sbjct: 217 FKGELHKQATEQIKRLYDVFLKVDATQVEINPFGETPDGKVVCFDAKFNFDDNAKYRQKA 276

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I +L D SE D RE+EA + +LSYIA+DGNI C+VNGAGLAMATMDIIKL+GG P+NFLD
Sbjct: 277 IFDLDDKSESDPREVEAAEFDLSYIAMDGNIACLVNGAGLAMATMDIIKLHGGEPSNFLD 336

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  ++ V  A KI++ D  VK IL+NIFGGI+ C V+  GI  A +++K+++P+V+R
Sbjct: 337 LGGGIKEEGVLHALKIVSKDPRVKVILVNIFGGIVDCSVVASGITKAYEKLKLDVPIVVR 396

Query: 359 LEGANVDIGNRLIAESGLNVI 379
           LEG NVD    ++ ESG+ +I
Sbjct: 397 LEGNNVDKAQHILEESGMPLI 417


>gi|255532906|ref|YP_003093278.1| succinyl-CoA synthetase subunit beta [Pedobacter heparinus DSM
           2366]
 gi|255345890|gb|ACU05216.1| succinyl-CoA synthetase, beta subunit [Pedobacter heparinus DSM
           2366]
          Length = 396

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 173/398 (43%), Positives = 241/398 (60%), Gaps = 20/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V  +V  A  A K +         V+K+QIHA     
Sbjct: 1   MNIHEYQGKEILKSFGVAVQEGIVADTVEQAVEAAKKMKTDYNSDWVVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V      ILG  L+T QTGP G +VN + V       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKERATAILGMQLVTPQTGPEGKKVNKILVAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+ +    
Sbjct: 111 ASETKEFYISVLLNRGNGRNIIMYSTEGGMDIEEVAEHTPHLIFKEEIDPKVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D ++ EINP++   + ++  +D+K+  D+N
Sbjct: 171 KIAFNLGLSGAAFKEMVKFVTALYKAYDSTDSAMFEINPVLKTSDDKIIAVDAKVDLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD  EED  ++EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALFRHPDYAAMRDKLEEDPTDVEASESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V A F II  D +VK ILINIFGGI+RCD + +G++ A  E+  
Sbjct: 291 EPANFLDVGGTANAQTVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYNEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           + +P++ RL+G N +   +LI ESGL V +AI L +A+
Sbjct: 351 VPVPIICRLQGTNAEEAKKLIDESGLKVYSAIALKEAS 388


>gi|295133500|ref|YP_003584176.1| succinyl-CoA synthetase beta chain [Zunongwangia profunda SM-A87]
 gi|294981515|gb|ADF51980.1| succinyl-CoA synthetase beta chain [Zunongwangia profunda SM-A87]
          Length = 397

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 172/402 (42%), Positives = 241/402 (59%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  + V   +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNIHEYQGKEILGSFGVRTQRGIVAQTAEEAVKAAKELTEQTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V     EI+G  L+T QT   G +V+ VYV +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVEQIAGEIIGMNLVTPQTSAEGKKVHQVYVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPHLIFTEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LY AF   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGTAFKEMTKFVTSLYTAFDKSDSSLFEINPVLKTSDDKILAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D  E+RD  EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAEMRDKREENPTEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF++I  D  V+ IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRLILKDEKVEAILVNIFGGIVRCDRVAQGIVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N D+  +LI ESGL V +A+   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNADVAKKLIDESGLAVSSAVQFKEAADKV 392


>gi|238880090|gb|EEQ43728.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 415

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 169/395 (42%), Positives = 237/395 (60%), Gaps = 7/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y VP+ KG   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLSEYGVPIPKGYPATTPEGAYDAAKKLGTNELVIKAQALTGGRGKGHF- 78

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E 
Sbjct: 79  ----DSGLQGGVKLISSAEEAKDLASQMLNHKLITKQTGAAGKEVTAVYIVERRDAASEA 134

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++L+DRT      +AS QGGMDIE VA   P  I    +    GV+      +   L 
Sbjct: 135 YVAILMDRTRQTPVIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEGVSDSLATEIAGALG 194

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               A  +      +LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  +
Sbjct: 195 FTQDAIPEAAKTIQSLYKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEE 254

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD ++ED +E EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD
Sbjct: 255 VFSWRDPTQEDPQEAEAGKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLD 314

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GG A  + +  AF++I SD  V GI +NIFGGI+RCD + KG+++A K   ++IP+V+R
Sbjct: 315 CGGTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVVR 374

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G N+     LI  SGL +    DLD AA+KIV 
Sbjct: 375 LQGTNMAEAKELIDNSGLKLYAFEDLDPAAEKIVQ 409


>gi|33989739|gb|AAH56551.1| Suclg2 protein [Danio rerio]
          Length = 419

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L++   V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 25  LNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGGRGKGVFN 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V     ++LG  L TKQT   G  V  V V +  DI RE Y 
Sbjct: 85  ---SGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISRETYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGGMDIEEVA   P+ IFK +ID   GV  +    +   L  +
Sbjct: 142 AILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQALRMAANLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D + +E+NPL     G++   D+KI+FDDNA +R   + 
Sbjct: 202 GPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +E D  E EA +++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 262 SMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++V AAFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 322 GGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R+++ESGL + +A DLDD
Sbjct: 382 GTNVHEAKRILSESGLPITSATDLDD 407


>gi|51260799|gb|AAH79367.1| Suclg2 protein [Rattus norvegicus]
          Length = 432

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 170/388 (43%), Positives = 234/388 (60%), Gaps = 7/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE 
Sbjct: 97  ----DSGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRET 152

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L 
Sbjct: 153 YLAILMDRSHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLG 212

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  D
Sbjct: 213 FLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 272

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD
Sbjct: 273 IFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLD 332

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+R
Sbjct: 333 LGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVR 392

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NV     ++  SGL + +A+DL+D
Sbjct: 393 LEGTNVQEAQNILKSSGLPITSAVDLED 420


>gi|189525094|ref|XP_001923821.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Danio rerio]
          Length = 432

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L++   V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V     ++LG  L TKQT   G  V  V V +  DI RE Y 
Sbjct: 98  ---SGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISRETYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGGMDIEEVA   P+ IFK +ID   GV  +    +   L  +
Sbjct: 155 AILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQALRMAANLGFK 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D + +E+NPL     G++   D+KI+FDDNA +R   + 
Sbjct: 215 GPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +E D  E EA +++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 275 SMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++V AAFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R+++ESGL + +A DLDD
Sbjct: 395 GTNVHEAKRILSESGLPITSATDLDD 420


>gi|157130276|ref|XP_001661866.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108871926|gb|EAT36151.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 446

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 175/393 (44%), Positives = 239/393 (60%), Gaps = 4/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +   L +  +P  K  V +S   AE   K L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYTFLNEAGIPTPKFGVANSAQDAEKIAKGLNTKNLVLKAQVLAGGRGKGTFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPQEARDISGKMIKQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+      ++   + L+
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDIKAGLQKAQALAIAKKVGLE 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   +  N+Y  F  KD  L+EINP           LD+K+ FDDNA +R  D+ 
Sbjct: 210 DHAE-ETAKMLLNMYDLFVKKDALLIEINPYAEDAGETYFALDAKMRFDDNAEFRQKDLF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+EDS+E+EA + +L+YIALDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 AKRDLSQEDSKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AF+IITSD  V  IL+NIFGGIMRCDV+ +GI+ A KE+ I +P+++RL+
Sbjct: 329 GGASVKAVKEAFRIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+    LI +S L ++   DLD+AA   VH
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAMLSVH 421


>gi|282879135|ref|ZP_06287894.1| succinate-CoA ligase, beta subunit [Prevotella buccalis ATCC 35310]
 gi|281298777|gb|EFA91187.1| succinate-CoA ligase, beta subunit [Prevotella buccalis ATCC 35310]
          Length = 382

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 174/397 (43%), Positives = 245/397 (61%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKAL  +Y++PV K V+  +V  A SA ++L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKALFAQYHLPVDKSVLCRTVDEAVSAYQSLGSERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + +     +ILG  +        G  V+ + V +  DI  E Y+
Sbjct: 58  -------GGVKVAKGEEQLREYASQILGMDI-------KGFTVDRILVGEAIDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
           S+++DR       + S +GGMDIE VAK+ P+KI K+ IDPLIG    +  E    L D 
Sbjct: 104 SIVIDRKVKSAILMLSREGGMDIESVAKNTPEKIHKIPIDPLIGMPDYLAREAAFCLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             L  QA      +F NLY+ F +KD SL EINPL++ K+G ++ +D+K++FD+NALYRH
Sbjct: 164 KALVNQAV----PVFQNLYRLFKEKDASLAEINPLVVTKSGEVKAIDAKMTFDNNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + + E+ +E +AK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVFELFEPTAEERKEQDAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ SDS V+ +LINIFGGI RCD + KG++ A K +  ++P+V
Sbjct: 280 LDIGGSSNPTKIVEAMKLLLSDSHVRVVLINIFGGITRCDDVAKGLIEAFKMLDTDMPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +RL G N   G  L+  +  +V  A  + +A +K V 
Sbjct: 340 IRLTGTNEAEGRELLKGTKFHV--AKTMSEAGKKAVE 374


>gi|54261767|ref|NP_998191.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Danio rerio]
 gi|37748067|gb|AAH59701.1| Succinate-CoA ligase, ADP-forming, beta subunit [Danio rerio]
          Length = 466

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 247/392 (63%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V S+   A +A K +     V+K+Q+ AGGRGKG F+
Sbjct: 56  LSLHEYMSIGLLKEAGISVPAGMVASTPDEAYTAAKQIGSKDLVIKAQVLAGGRGKGTFE 115

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S +       +++G  L TKQTG  G   N V+V +     RE Y 
Sbjct: 116 ---GGLKGGVRIVYSPEEARDISSKMIGKKLFTKQTGEAGRICNQVFVCERRYPRREYYF 172

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  +    + + +   
Sbjct: 173 AITMERSYQGPVLIGSSQGGVNIEDVAAENPDAIVKEPIDIVEGIKMDQAIKVAEKMGFP 232

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D S++EINP++   +G +  +D+KI+FD NA YR   + 
Sbjct: 233 PALINEAAENMLKLYDVFIKYDASMVEINPMVEDSSGIVMCMDAKINFDSNAAYRQKKVF 292

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD S+ED+R+ +A + +L+YI LDG IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 293 DMRDWSQEDARDRQAAKADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 352

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AV ++ + IP+V+RL+
Sbjct: 353 GGATAQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVTDLDLKIPIVVRLQ 412

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LIA S L ++   DLD+AA+ +V
Sbjct: 413 GTRVDDAKALIAASPLKILACDDLDEAAKMVV 444


>gi|164669|gb|AAA31120.1| succinyl-CoA synthetase beta-subunit [Sus scrofa]
          Length = 417

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 23  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 83  ---SGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 140 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 200 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 260 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 320 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 380 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 414


>gi|71681082|gb|AAH99746.1| Suclg2 protein [Rattus norvegicus]
          Length = 429

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/388 (43%), Positives = 234/388 (60%), Gaps = 7/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F 
Sbjct: 35  LNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVF- 93

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE 
Sbjct: 94  ----DSGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRET 149

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L 
Sbjct: 150 YLAILMDRSHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLG 209

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  D
Sbjct: 210 FLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 269

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD
Sbjct: 270 IFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLD 329

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+R
Sbjct: 330 LGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVR 389

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NV     ++  SGL + +A+DL+D
Sbjct: 390 LEGTNVQEAQNILKSSGLPITSAVDLED 417


>gi|19075966|ref|NP_588466.1| succinate-CoA ligase (beta subunit) [Schizosaccharomyces pombe
           972h-]
 gi|21264033|sp|O94415|SUCB_SCHPO RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
           beta, mitochondrial; AltName: Full=Succinyl-CoA
           synthetase beta chain; Short=SCS-beta; Flags: Precursor
 gi|4008575|emb|CAA22492.1| succinate-CoA ligase (beta subunit) [Schizosaccharomyces pombe]
          Length = 433

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/392 (43%), Positives = 236/392 (60%), Gaps = 7/392 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + +HEY +  +LRK+ V V +G    S   AE   + L     VVK+Q+ AGGRGKG+F 
Sbjct: 23  LALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDLKVTDLVVKAQVLAGGRGKGQF- 81

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGVR             +++G  LIT+QTGP G   N VYV +   I +E 
Sbjct: 82  ----DSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEY 137

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR +     +AS QGG+DIE VA + P  I K  +     +       L D L 
Sbjct: 138 YFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLG 197

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               ++    D    LYK F D D + +EINPL    + ++  +D+K++FDDNA +RH +
Sbjct: 198 FSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSN 257

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD+S+ED  E  A +  L++I LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 258 IFVLRDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 317

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A+ + +  AF +IT+D     I +NIFGGI+RCDV+ KG++S V  + +NIP++ R
Sbjct: 318 VGGNANAEAIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIICR 377

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           L+G N      +I  SGL + +  DLD+AA+K
Sbjct: 378 LQGTNQGAAKEVINNSGLRIFSFDDLDEAAKK 409


>gi|302342618|ref|YP_003807147.1| succinyl-CoA synthetase, subunit beta [Desulfarculus baarsii DSM
           2075]
 gi|301639231|gb|ADK84553.1| succinyl-CoA synthetase, beta subunit [Desulfarculus baarsii DSM
           2075]
          Length = 389

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 177/397 (44%), Positives = 242/397 (60%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L  + VPV KG +  S   A+     L    YVVK+QIHA         
Sbjct: 1   MNVHEYQAKQMLAAFGVPVPKGGLAESAAQAQDVANGLAAEGYVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +         ++LG  L+T QTGP G +V  V++E    I +ELYL
Sbjct: 52  -GGRGKGGGVKVVKTAAEAAEAAAKMLGMHLVTHQTGPEGKKVRKVWIEQATAIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR S  +A +AS  GGMDIEEVA   P++IF   IDP   + +     L     L 
Sbjct: 111 AVVLDRASECLAVMASPDGGMDIEEVAAKTPERIFATRIDPGQSLWAFQARKLLFGCGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  L  NL +   +K+ +L+EINPL++   G L  +D+KI+FDD+AL R  D+ 
Sbjct: 171 AAQVRQGETLLKNLARLAWEKEATLVEINPLVVTAAGDLLAVDAKINFDDSALKRQPDVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D  E D  E+ A +  L+YI L+GN+G MVNGAGLAMATMD+IK+ G  PANFLDVG
Sbjct: 231 ALKDPLETDPLELAATEQGLNYIRLNGNVGTMVNGAGLAMATMDVIKMAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  AF+II  D +V+ ILINIFGGI+RCDVL  G+++A ++V + +PLV+RLE
Sbjct: 291 GGASEEMITKAFEIILEDQNVQAILINIFGGILRCDVLAAGVVAAARKVDLKLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G R++AES L    A  L +AA+KI     G
Sbjct: 351 GTNVEEGRRILAESDLAFEVAASLSEAAEKIAKVAGG 387


>gi|156743146|ref|YP_001433275.1| succinyl-CoA synthetase subunit beta [Roseiflexus castenholzii DSM
           13941]
 gi|189081789|sp|A7NNW3|SUCC_ROSCS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|156234474|gb|ABU59257.1| succinyl-CoA synthetase, beta subunit [Roseiflexus castenholzii DSM
           13941]
          Length = 379

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 174/399 (43%), Positives = 248/399 (62%), Gaps = 25/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ +L +Y VPV  G V ++  A   AI    G   VVK+Q+  GGRGK    
Sbjct: 1   MKLHEYQARDILARYGVPVTGGGV-ATTPAEARAIAEQIGGRVVVKAQVFVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G  V  V V +     RE+YL
Sbjct: 57  -------GGVKLADTPEQAEQVAGQILGMNI-------KGLTVEKVLVAEAITYEREIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
             ++DR S  +  +AS +GG++IEEVA+  P+ I K+   P++G+    + D+A    + 
Sbjct: 103 GAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMLGLLDFQARDLAYGIGLT 162

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           + + QAR     +   LY+A+ D D SL EINPL++  +G L+ LDSKI  DD+ L+RH 
Sbjct: 163 DAK-QAR-QFAQIATALYRAYMDVDASLAEINPLVVRADGSLQALDSKIVLDDSGLFRHP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ +RD S+E   E  A++  ++YI LDG+IGCMVNGAGLAMATMD+IKLYGG PANFL
Sbjct: 221 DLEAMRDASDEPEAEQRAREAGITYIKLDGDIGCMVNGAGLAMATMDVIKLYGGEPANFL 280

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGA ++KV  A +II SD +VK ++ NIFGGI R D + KGI++A+ EV+ N+P++ 
Sbjct: 281 DIGGGASKEKVKTALQIILSDPNVKAVMFNIFGGITRVDEVAKGIVAALSEVQTNVPMIA 340

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G N + G R++AES L  I A  L +AA+K VHA +
Sbjct: 341 RLVGTNEEEGRRILAESAL--IPAATLAEAAEKAVHAAR 377


>gi|21264506|sp|P53590|SUCB2_PIG RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
          Length = 433

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 99  ---SGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 156 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 396 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 430


>gi|282879726|ref|ZP_06288456.1| succinate-CoA ligase, beta subunit [Prevotella timonensis CRIS
           5C-B1]
 gi|281306395|gb|EFA98425.1| succinate-CoA ligase, beta subunit [Prevotella timonensis CRIS
           5C-B1]
          Length = 382

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 174/397 (43%), Positives = 245/397 (61%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKAL  +Y++PV K V+  +V  A SA ++L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKALFAQYHLPVDKSVLCRTVDEAVSAYQSLGSERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + +     +ILG  +        G  V+ + V +  DI  E Y+
Sbjct: 58  -------GGVKVAKGEEQLKEYASQILGMDI-------KGFTVDRILVGEAIDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
           S+++DR       + S +GGMDIE VAK+ P+KI K+ IDPLIG    +  E    L D 
Sbjct: 104 SIVIDRKVKSAILMLSREGGMDIESVAKNTPEKIHKIPIDPLIGMPDYLAREAAFCLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             L  QA      +F NLY+ F +KD SL EINPL++ K+G ++ +D+K++FD+NALYRH
Sbjct: 164 KALVKQAV----PVFQNLYRLFKEKDASLAEINPLVVTKSGEVKAIDAKMTFDNNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + + E+ +E +AK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVFELFEPTAEERKEQDAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ SDS V+ +LINIFGGI RCD + KG++ A K +  ++P+V
Sbjct: 280 LDIGGSSNPTKIVEAMKLLLSDSHVRVVLINIFGGITRCDDVAKGLIEAFKMLDTDMPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +RL G N   G  L+  +  +V  A  + +A +K V 
Sbjct: 340 IRLTGTNEAEGRELLKGTKFHV--AKTMSEAGKKAVE 374


>gi|255721911|ref|XP_002545890.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240136379|gb|EER35932.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 416

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/395 (42%), Positives = 238/395 (60%), Gaps = 7/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y VP+ +G   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLSQYGVPIPRGYAATTPEGAYEAAKKLGTNELVIKAQALTGGRGKGHF- 78

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E 
Sbjct: 79  ----DSGLQGGVKLISSAEEAKDLAGQMLNHKLITKQTGAAGKEVTAVYIVERRDAATEA 134

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++L+DR       +AS QGGMDIE VA   P  I    +    GV+      +  +L 
Sbjct: 135 YVAILMDRAKQTPIIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEGVSDSLATEIAGVLG 194

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               A  +      +LY  F ++D + +EINPL    + ++  +D+K+ FDDNA +R  +
Sbjct: 195 FTQDAIPEAAKTIQSLYNCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEE 254

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD ++ED +E+EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD
Sbjct: 255 VFSWRDPTQEDPQEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLD 314

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GG A  + +  AF++I SDS V GI +NIFGGI+RCD + KG+++A K   ++IP+V+R
Sbjct: 315 CGGTATPETIEKAFELILSDSKVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVVR 374

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G N+     LI  SGL +    DLD AA+KIV 
Sbjct: 375 LQGTNMAEAKELIDNSGLKLYAFEDLDPAAEKIVE 409


>gi|189491689|ref|NP_001094220.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           [Rattus norvegicus]
 gi|149036796|gb|EDL91414.1| rCG56440 [Rattus norvegicus]
 gi|169642263|gb|AAI60886.1| Suclg2 protein [Rattus norvegicus]
          Length = 434

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/388 (43%), Positives = 234/388 (60%), Gaps = 7/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F 
Sbjct: 40  LNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVF- 98

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE 
Sbjct: 99  ----DSGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRET 154

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L 
Sbjct: 155 YLAILMDRSHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLG 214

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  D
Sbjct: 215 FLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 274

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD
Sbjct: 275 IFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLD 334

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+R
Sbjct: 335 LGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVR 394

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NV     ++  SGL + +A+DL+D
Sbjct: 395 LEGTNVQEAQNILKSSGLPITSAVDLED 422


>gi|332372528|gb|AEE61406.1| unknown [Dendroctonus ponderosae]
          Length = 450

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/389 (44%), Positives = 237/389 (60%), Gaps = 4/389 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ +  LL+   + V    V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 41  LNVHEHVSYTLLKDAGITVPNFGVAKTKQEARQIAEKLNTKDLVLKAQVLAGGRGKGSFK 100

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         ++LG  L+TKQTG  G   N V V +     +E Y 
Sbjct: 101 N---GLKGGVRMVYSPDEAEDISGQMLGQYLVTKQTGEKGRICNAVMVAERKFPRKEFYF 157

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    +D   G+T E    +   + L+
Sbjct: 158 AVMMERAFAGPVIIASSQGGVNIEEVAAENPDAILYEPVDVTKGLTKEQAEKVAVKVGLE 217

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q +    ++   +Y  F  KD  L+EINP       +   LD+K  FDDNA +R  D+ 
Sbjct: 218 SQ-KEKTAEMLLRMYDLFVKKDALLIEINPYAEDAGEKYFSLDAKFRFDDNAAFRQKDLF 276

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+ A + +L+YIALDGNIGCMVNGAGLAMATMDII L+GG+PANFLDVG
Sbjct: 277 ALRDWTQEDEKEVAASKFDLNYIALDGNIGCMVNGAGLAMATMDIISLHGGSPANFLDVG 336

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P+V RL+
Sbjct: 337 GGATASAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELSLKMPIVCRLQ 396

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA SGL ++   +LD+AA+
Sbjct: 397 GTNVDDAKVLIASSGLKILPVDNLDEAAR 425


>gi|159901081|ref|YP_001547328.1| succinyl-CoA synthetase subunit beta [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|226734958|sp|A9B0I2|SUCC_HERA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|159894120|gb|ABX07200.1| succinyl-CoA synthetase, beta subunit [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 378

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 169/398 (42%), Positives = 245/398 (61%), Gaps = 23/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ ++ +Y +PV  G V ++    +   + + GP+  VK+Q+H GGRGK    
Sbjct: 1   MKLHEYQARDIVARYGIPVTGGGVAATAEEVQKVAEQIGGPV-AVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++        + ILG  +        G  V  V V +     +E+YL
Sbjct: 57  -------GGIKLANTPAEAFDAGKAILGMDI-------KGLTVEKVLVAEAITFEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  IAS++GG++IEEVAK  P  I KL  DPL+G+       L   + + 
Sbjct: 103 GVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQELAYSIGIT 162

Query: 181 --GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              QAR     +   LY+AF + D  L EINPL+++ NG+L+ LDSKI  DD+ L+RH +
Sbjct: 163 DAKQAR-QFSSIATGLYRAFVENDAELAEINPLVVLPNGQLQALDSKIVLDDSGLFRHSE 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  +RD++ E   EI+A+++ L++I LDGNIGCMVNGAGLAMATMD++ L+GG PANFLD
Sbjct: 222 VAGMRDIAGEPESEIKARENGLTFIKLDGNIGCMVNGAGLAMATMDVVNLFGGEPANFLD 281

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA+  KVAAA  II  D +VK +++NIFGGI RCD + KGI+ A K +K  +P+V+R
Sbjct: 282 IGGGANAQKVAAALDIILDDPNVKVVMVNIFGGITRCDEVAKGIVEAQKIIKRQVPMVVR 341

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L G N   G R++A++ L    A  L DAAQK V   K
Sbjct: 342 LVGTNEAEGQRILADASLT--PASTLADAAQKAVDIAK 377


>gi|83286160|ref|XP_730040.1| succinyl-coa ligase subunit beta, hydrogenosomal precursor
           [Plasmodium yoelii yoelii str. 17XNL]
 gi|23489549|gb|EAA21605.1| succinyl-coa ligase beta-chain, hydrogenosomal precursor
           [Plasmodium yoelii yoelii]
          Length = 458

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 163/396 (41%), Positives = 249/396 (62%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPL-YVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +          ++ + G +  V+K+QI +GGRG 
Sbjct: 46  LSIHEYLSIDLLRNNNIPCPQGFHAQTPEEAEEKALELQNICGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPDGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE+++K  P+ I+K+ I+   G+T       C+ 
Sbjct: 164 ERYVAFLLDRNSDSICLLGSSVGGSSIEDISKKTPEAIYKININIKDGLTDGQSREFCEQ 223

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +G       D+  NLYK F   D +LLEINPL    +GR+   D+K++FDDNA YR 
Sbjct: 224 IGFKGNELDMATDMVVNLYKIFKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEYRQ 283

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E RD+++E+  E+EAK++NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 284 KEIFEKRDLTQENPEELEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNF 343

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A + ++A A KII ++   K   INI GGIMRCD++ +GI++A K++K   PL+
Sbjct: 344 LDVGGSATETEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIKFKKPLI 403

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RLEG N     ++I ES +  I   D++ AA+K V
Sbjct: 404 IRLEGTNEKEAIKIIEESKIKCIICQDMNLAAEKAV 439


>gi|221633777|ref|YP_002523003.1| succinyl-CoA synthetase subunit beta [Thermomicrobium roseum DSM
           5159]
 gi|221156306|gb|ACM05433.1| succinyl-CoA synthase, beta subunit [Thermomicrobium roseum DSM
           5159]
          Length = 390

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 166/397 (41%), Positives = 240/397 (60%), Gaps = 20/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQA  L  +Y +PV +G+V  +   A +A + L G + VVK+Q+HAGGRGK    
Sbjct: 13  MDLHEYQAAELFARYGIPVNRGIVARTPEEASAAAEQLGGRV-VVKAQVHAGGRGKA--- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+        +  R+ILG  +        G  V  V V       RE YL
Sbjct: 69  -------GGIRLADDPVQAEAVARQILGMEI-------RGRIVRKVLVAPAVAFEREYYL 114

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS+ GG+DIEEVA++ P  I +   DP +G        L   L ++
Sbjct: 115 GAVLDRDSRRIVVMASSAGGVDIEEVARERPTAIVREQADPFLGFLDFQARRLAFRLGIE 174

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LY+AF D D SL EINPL++ ++     LD+K+  DDN L+RH D+ 
Sbjct: 175 PDLVRGFATIARQLYRAFVDNDASLAEINPLVLTQDRSWLALDTKVVLDDNGLFRHPDLA 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED  E EA+   +S++ L+G +GC+VNGAGL+MATMD IKLYGG PANFLD+G
Sbjct: 235 ELRDPEEEDPLEREARLAGISFVRLNGTVGCIVNGAGLSMATMDAIKLYGGEPANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VAAA +I+ +D +V+ IL+NIFGGI R DV+ +GIL A+++V++ +P+V+RL 
Sbjct: 295 GGASAQRVAAALRIVVADPNVRAILVNIFGGITRGDVVAQGILEALRQVEVRVPMVIRLV 354

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   + G RL+ E+G  V+    +++AAQ+ V   +G
Sbjct: 355 GTRQEEGRRLLEEAGFTVVDT--MEEAAQRAVALAQG 389


>gi|50427905|ref|XP_462565.1| DEHA2G23584p [Debaryomyces hansenii CBS767]
 gi|49658235|emb|CAG91076.1| DEHA2G23584p [Debaryomyces hansenii]
          Length = 414

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 239/392 (60%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE+++ ALL+ Y V V  G   ++   A    K L     VVK+Q   GGRGKG F 
Sbjct: 20  LSLHEFRSAALLKTYGVGVPDGSAATTPEKAYEVAKALGTNDLVVKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++ SS +       ++LG  LITKQTG  G  V  VY+ +  D   E YL
Sbjct: 80  N---GFQGGVKLISSPEEAKELAEKMLGHKLITKQTGEAGKEVTAVYIVERRDARTEAYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR++     +AS+QGGMDIE VA   P  I    +    GV+ +    +  +L   
Sbjct: 137 AILMDRSTQTPLIVASSQGGMDIEGVAAKDPDAIKSFPVPLEEGVSDKLAIDIASVLGYT 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A  +      NLYK F ++D + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 197 QEAIPEAAKTVQNLYKVFMERDCTQVEINPLSETPDHKVLAMDAKLNFDDNAAFRQKEVF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED  E+ A ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGGAPANFLD G
Sbjct: 257 SWRDPSQEDPEEVTAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGAPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SD  V GI +NIFGGI+RCD + +G+++A K   ++IP+V+RL+
Sbjct: 317 GTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVVRLQ 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G N+     LI  SGL +    DLD AA+KIV
Sbjct: 377 GTNMAKAKELIENSGLKLYAFEDLDPAAEKIV 408


>gi|269837811|ref|YP_003320039.1| succinyl-CoA synthetase, beta subunit [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787074|gb|ACZ39217.1| succinyl-CoA synthetase, beta subunit [Sphaerobacter thermophilus
           DSM 20745]
          Length = 379

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 166/384 (43%), Positives = 241/384 (62%), Gaps = 28/384 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQA  +L+ Y +P+ +G+V ++     +A   L G + VVK+Q+H GGRGK    
Sbjct: 1   MNIHEYQAAEILKGYGIPINQGIVATTPDEVAAAAGQLGGTV-VVKAQVHTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +        ILG  +        G  V+ V V  G DI RE YL
Sbjct: 57  -------GGVKLAHSPEEAREVGSRILGMDI-------RGHTVHKVLVAPGVDIAREYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  +  +AS+ GG+DIEEVA++ P+KI +   +P +G        L   L ++
Sbjct: 103 GVVIDRAARGITIMASSAGGVDIEEVARETPEKIHREAANPFLGFHDYQARRLAFKLGIE 162

Query: 181 -----GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
                G ARI        L++AF   D SL EINPL++  +     LDSKI+ DD+AL R
Sbjct: 163 PDLVGGFARI-----ARQLFEAFVQSDASLAEINPLVLTADRTWLALDSKITIDDSALVR 217

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D+++LRD+ EE++ E+EA+   +S++ LDGNIGC+VNGAGL+MATMD IK YGG PAN
Sbjct: 218 HPDLEQLRDLQEENATELEARAAGISFVKLDGNIGCVVNGAGLSMATMDAIKHYGGEPAN 277

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA  ++V  A +++ +DS+V+ +LINIFGGI RCD + +G+L+A+  VK  +P 
Sbjct: 278 FLDVGGGASAEQVEKALRLVLADSNVRAVLINIFGGITRCDEVARGLLAAMDAVKPTVPF 337

Query: 356 VMRLEGANVDIGNRLIAESGLNVI 379
           V+RL G N D G R++A++G+ V+
Sbjct: 338 VIRLVGTNQDEGRRILADAGITVV 361


>gi|325285020|ref|YP_004260810.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga lytica
           DSM 7489]
 gi|324320474|gb|ADY27939.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga lytica
           DSM 7489]
          Length = 396

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 173/401 (43%), Positives = 241/401 (60%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHNAQEAVTAAKQLTQETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V      I+G  LIT QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLNEVEEIAGNIIGMNLITPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP  G+      
Sbjct: 111 ESETSEFYMSVLLNRATGRNMIMYSTEGGMDIEEVAEKTPHLIFTEEIDPATGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D S+ EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGLAFKEMTKFVASLYKAYVESDSSMFEINPVLKTSDNKIMAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     E+RD+ EE+  E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRRKQYAEMRDLREENPIEVEAGALGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V AAFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVEAAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI   LI  SGL+V +A+   +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKELIDNSGLDVQSAVQFQEAADKV 391


>gi|225012702|ref|ZP_03703137.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-2A]
 gi|225003235|gb|EEG41210.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-2A]
          Length = 397

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 173/406 (42%), Positives = 246/406 (60%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHA----AESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +        +   +T     ++VK+QIHA     
Sbjct: 1   MNLHEYQGKEVLAGFGVTIQRGIVAKTAAEAVAAGKQLTETTGTQWHIVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ + S    I+G  LIT QT P G +VN + V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQELESVATSIIGMQLITPQTPPEGKKVNQILVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A    E Y+S+L++R +G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ASEPSEFYMSILLNRATGKNMIMYSTEGGMDIEAVAEVTPHLIFTEEIDPALGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LY+A+   D SL EINP++   + R+  +D+K++ DDN
Sbjct: 171 KVAFNLGLSGAAFKDMTKFVSALYRAYVGSDASLFEINPVLKTSDDRIIAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           +L+RH D + LRD+SEE+  E+EA+   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 SLFRHPDFEALRDLSEENPVEVEARSVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF++I  D +VK ILINIFGGI+RCD + +GI+ A K +  
Sbjct: 291 DPANFLDVGGTADAARVEIAFRLILKDPAVKAILINIFGGIVRCDRVAQGIVDAYKNLGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N DI  +LI  SGLNV++A    +AA K+  A+
Sbjct: 351 AIQVPIIVRLQGTNADIAKKLIDSSGLNVLSATAFQEAADKVQEAI 396


>gi|196005415|ref|XP_002112574.1| hypothetical protein TRIADDRAFT_25488 [Trichoplax adhaerens]
 gi|190584615|gb|EDV24684.1| hypothetical protein TRIADDRAFT_25488 [Trichoplax adhaerens]
          Length = 416

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 166/389 (42%), Positives = 242/389 (62%), Gaps = 3/389 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            +IHE+Q+  LL ++ +   +  V ++         TL     VVK+Q+ AGGRGKG F+
Sbjct: 6   FSIHEHQSMQLLDQHGIRTPQSRVATTPIQVHEVASTLGSKDVVVKAQVLAGGRGKGLFE 65

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S     +    +LG  LITKQTG  G   N V V +     RE Y 
Sbjct: 66  ---SGLKGGVKIAYSPDEAKTIAANMLGHKLITKQTGGAGVLCNKVMVSERLYPRREYYF 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D TS     IAS QGG+DIE VA + P+ I K  ID + G+  +   S+   +   
Sbjct: 123 AITMDPTSMGPIIIASNQGGVDIETVAAETPEAIIKQPIDIIEGLNRDTALSIARKVGFG 182

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   LY  F + D  ++EINP+    NG +  +D+K+  D +AL+RH ++ 
Sbjct: 183 PEYIDQATDIIQKLYSVFIENDALMVEINPMTEDSNGNVYCMDAKVKLDTSALFRHKNLA 242

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED R++ A + +L+YI LDG+IGC+VNGAGLAM+TMDIIKL+GG PANFLDVG
Sbjct: 243 ELRDWSQEDPRDVAASKADLNYIGLDGSIGCLVNGAGLAMSTMDIIKLHGGLPANFLDVG 302

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  AF+II+SD  V  +L+NIFGGIMRCDV+ KGI++A  ++K+ IP+++RL+
Sbjct: 303 GGATADQVTQAFQIISSDQHVNAVLVNIFGGIMRCDVIAKGIVAAADQLKLKIPIIVRLQ 362

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G  V+    +I  S  ++++  DLD+AA+
Sbjct: 363 GTRVEDAKAVIGASKFHILSCDDLDEAAK 391


>gi|196020149|ref|XP_002119095.1| hypothetical protein TRIADDRAFT_35139 [Trichoplax adhaerens]
 gi|190576979|gb|EDV18418.1| hypothetical protein TRIADDRAFT_35139 [Trichoplax adhaerens]
          Length = 277

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/281 (54%), Positives = 212/281 (75%), Gaps = 10/281 (3%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-----C 174
           +S+++DR +  +   AST+GGM+IEEVAK+ P+KI    +D  IG+ +  +A L      
Sbjct: 1   ISVVLDRDNNCITIAASTEGGMEIEEVAKESPEKIITAQVDFTIGLQNFHIAKLGFGMGL 60

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           D ++L+  A++        LYK+F + D S +EINPLI  ++ +   LD+K +FDDNALY
Sbjct: 61  DKVQLKSFAKV-----VRALYKSFVETDASQIEINPLIETEDSKFIPLDAKFNFDDNALY 115

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           +H DI+ +RD+ EED +E+EAK+++LSY+ +DG+IGCMVNGAGLAMATMDIIKLYG  PA
Sbjct: 116 KHPDIEAMRDIHEEDPQEVEAKKYDLSYVKMDGSIGCMVNGAGLAMATMDIIKLYGKEPA 175

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA  +KV  AFKII SDS+VKGIL+NIFGGIM+CD++  GI++A KEV+IN+P
Sbjct: 176 NFLDVGGGATTEKVTEAFKIILSDSNVKGILVNIFGGIMKCDIIANGIVTAAKEVQINVP 235

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +V+RLEG N ++G +++ ESGL +  A DL+DAA+KIV+ V
Sbjct: 236 VVVRLEGTNAEMGKKILQESGLKLEAANDLEDAAKKIVNVV 276


>gi|329728951|gb|EGG65365.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 308

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 155/318 (48%), Positives = 205/318 (64%), Gaps = 10/318 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSD 318
           G A ++KV  AFKII  D
Sbjct: 291 GSATREKVTEAFKIILGD 308


>gi|332022240|gb|EGI62555.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Acromyrmex echinatior]
          Length = 441

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 241/392 (61%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + +HE+ A  LL+K  +P     V  +   A +  K L     V+K+Q+ AGGR KG FK
Sbjct: 25  LEVHEHMAYTLLKKAGIPTPPFWVAKTSDEAATLAKNLNTKDLVLKAQVLAGGRAKGHFK 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              + +  GV +  ++K V      ++ + L+T+QTGPTG   N V V       +E Y+
Sbjct: 85  ---SSNVSGVVMCDTIKQVKELADSMIDNVLVTRQTGPTGKICNSVMVTTRMFPRKEYYM 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++RT      I S QGG++IE+VA   P+ I  + ID   G+T E   ++ D L L 
Sbjct: 142 AVMLERTFNGPVIIVSKQGGVNIEDVAATNPEAIVYVPIDVKKGLTPEQANNIADKLGLV 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G ++     +  NLY  F +KD  LLEINP      G    LD K  FDD+A +R  ++ 
Sbjct: 202 GASKEIASLVASNLYDLFVEKDALLLEINPFAEDICGEYYALDCKCKFDDSADFRQKELF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D ++ D +E+EA+++NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 262 ALKDTTQMDPKEVEAEKYNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGMPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V   FKI+++D +V+ IL+NIFGGI +CD++ +GI+ A K++ IN+P++ RL+
Sbjct: 322 GTATVETVTEGFKILSTDPNVEAILVNIFGGITKCDIIAQGIIDATKQLNINVPIITRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NVD   +LI ++ L VI       AA+  V
Sbjct: 382 GNNVDKAKQLILDAKLKVIPVNSFIQAAKTSV 413


>gi|163846696|ref|YP_001634740.1| succinyl-CoA synthetase subunit beta [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524503|ref|YP_002568974.1| succinyl-CoA synthetase subunit beta [Chloroflexus sp. Y-400-fl]
 gi|189046907|sp|A9WJ74|SUCC_CHLAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778436|sp|B9LB77|SUCC_CHLSY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|163667985|gb|ABY34351.1| succinyl-CoA synthetase, beta subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448382|gb|ACM52648.1| succinyl-CoA synthetase, beta subunit [Chloroflexus sp. Y-400-fl]
          Length = 380

 Score =  309 bits (791), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 178/398 (44%), Positives = 240/398 (60%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ LL ++ +PV  G V  +   A +    + GP+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +        R+ILG  +        G  V  V V +     RELYL
Sbjct: 57  -------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V  IAS +GG++IEEVAK  P  I K+   P +G+       L   + L 
Sbjct: 103 SAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLN 162

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+AF + D SL+EINPL++  +G L  LDSKI  D++AL+RH D+
Sbjct: 163 DGKQARQFAQIASALYRAFVECDASLVEINPLVVKADGSLLALDSKILLDESALFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D S E   E  A++  ++YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLD+
Sbjct: 223 AALHDPSAEPEAERRAREAGITYIKLDGNIGCMVNGAGLAMATMDVIKLSGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV AA +II SD +VK +L NIFGGI R D + +GI++A++EV  ++P+V RL
Sbjct: 283 GGGAGKEKVKAALQIILSDPNVKAVLFNIFGGITRVDEVARGIIAALEEVPTDVPMVARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N + G  L+AES L  I A  L + AQK V A +G
Sbjct: 343 VGTNEEAGRALLAESKL--IPAATLAEGAQKAVAAARG 378


>gi|156101930|ref|XP_001616658.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium vivax
           SaI-1]
 gi|148805532|gb|EDL46931.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium vivax]
          Length = 462

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 166/397 (41%), Positives = 246/397 (61%), Gaps = 7/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPL-YVVKSQIHAGGRGK 56
           +++HEY +  LLR   +P A+G    +          ++ L G +  V+K+QI +GGRG 
Sbjct: 49  LSLHEYISIDLLRNNMIPCAQGYAAKTPEEAEEKALELQNLCGDVDLVIKAQILSGGRGV 108

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   + +GGV +  +   V     ++L +TL+TKQTG  G + N V++ +   I +
Sbjct: 109 GYFKE--NNFEGGVHICRNSTEVKEIASKMLRNTLVTKQTGEEGKKCNTVFICERFYIRK 166

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++LL+DR+S  +  + S+ GG  IEE++K  P+ I K+ ID   G +S      C+ 
Sbjct: 167 ERYVALLLDRSSDGIVLLGSSTGGSSIEEISKKNPEAIHKMRIDVQNGFSSGQSREFCEK 226

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +        D+  NLYK F   D +LLEINP     +GR+   D+K++FDDNA YR 
Sbjct: 227 IGFKNTQLDIATDVIANLYKIFTQYDCTLLEINPFSETNDGRVLCCDAKLNFDDNAEYRQ 286

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I + RD+S+E++ EI+AK+ NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 287 KEIFQKRDLSQENAEEIQAKKFNLNYVSLDGNIACMVNGAGLAMATLDLIVLHSGSPSNF 346

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK-EVKINIPL 355
           LDVGGGA +D++  A KII  +   K   INI GGIMRCD++ +GI+ A K E     PL
Sbjct: 347 LDVGGGATEDEITEALKIINKNPKAKVCFINILGGIMRCDIIARGIIRAFKEEAAFGKPL 406

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           ++RLEG N D    L+ +SG+  +   D++ AAQK V
Sbjct: 407 IVRLEGTNQDEAEELLRQSGVKCVFCQDMNLAAQKSV 443


>gi|228473148|ref|ZP_04057905.1| succinyl-CoA synthetase beta chain [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275730|gb|EEK14507.1| succinyl-CoA synthetase beta chain [Capnocytophaga gingivalis ATCC
           33624]
          Length = 397

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 173/407 (42%), Positives = 247/407 (60%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V ++    V AAE   +      YVVK+QIHA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVATTADEAVKAAEKLTEQTGTQWYVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLEQVKEISSQIIGMHLVTPQTPKEGKKVHQVLIAEDVFYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEYYMSILLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPELGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L L+G+A  +      +LYKA+   D +L EINP++   + ++  +D+K++ DDN
Sbjct: 171 NVAFNLGLEGEAFKEMVKFVTSLYKAYITSDANLFEINPVLKTSDNKILAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D  ELRD  EE   E+EAK   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAELRDTREERPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAARVETAFRIILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGT 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            I +P+++RL+G N +I   +I +SGL V +AI   +AA K+   +K
Sbjct: 351 DIKVPIIVRLQGTNAEIAKEIIDKSGLAVHSAIQFQEAADKVKEVLK 397


>gi|221122230|ref|XP_002167210.1| PREDICTED: similar to MGC132166 protein [Hydra magnipapillata]
          Length = 425

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 175/395 (44%), Positives = 239/395 (60%), Gaps = 6/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL---YVVKSQIHAGGRGKG 57
           +N+ EY +K LL  Y + + K  V ++   A    ++L        V+K+QI AGGRGKG
Sbjct: 31  LNLQEYASKKLLAHYGINIQKFDVATTPKEAAKIGRSLMADTADELVIKAQILAGGRGKG 90

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F+      KGGV++   + +V     ++LG  L TKQT P G  V  + V +   I RE
Sbjct: 91  VFEN---GFKGGVKLTKDVNTVEDIASKMLGFRLTTKQTPPNGVLVKKLMVCESLTITRE 147

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+++L+DR +     +AS +GG+DIEEVA+  P KI K  ID   GVT E    +   L
Sbjct: 148 TYIAILMDREANGSVIVASPEGGVDIEEVAEKNPSKILKENIDIEKGVTLEQADRISTFL 207

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             QG+           LY  F   D   +EINP        +   D+KI+FDDNA +R  
Sbjct: 208 NFQGKKHTQASLQIRRLYNLFNGVDAVQVEINPFGETDKDEVVCFDAKINFDDNAKFRQK 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I E+ D SE D RE+EA ++NL+YI LDGNI CMVNGAGLAMATMDIIKL GG PANFL
Sbjct: 268 AIFEMDDHSEADPRELEADKYNLNYIPLDGNIACMVNGAGLAMATMDIIKLNGGWPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  ++ V   FK++TSD  V+ IL+NIFGGI+ C V+ +GI  A + + +++P+V+
Sbjct: 328 DLGGGVTENGVYHGFKLLTSDPQVRCILVNIFGGIVDCAVIARGITKAYQSMNLSVPVVV 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RLEG NVD   R++ ES + + TA +LDDAA+K V
Sbjct: 388 RLEGTNVDEAKRILTESQMPIKTAENLDDAAKKAV 422


>gi|157130278|ref|XP_001661867.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108871927|gb|EAT36152.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 449

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 241/396 (60%), Gaps = 7/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +   L +  +P  K  V +S   AE   K L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYTFLNEAGIPTPKFGVANSAQDAEKIAKGLNTKNLVLKAQVLAGGRGKGTFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPQEARDISGKMIKQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+      ++   + L+
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDIKAGLQKAQALAIAKKVGLE 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A  +   +  N+Y  F  KD  L+EINP        + +   LD+K+ FDDNA +R  
Sbjct: 210 DHAE-ETAKMLLNMYDLFVKKDALLIEINPYAEDAGETSSQYFALDAKMRFDDNAEFRQK 268

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+   RD+S+EDS+E+EA + +L+YIALDG+IGC+VNGAGLAMATMDIIKL+GG PANFL
Sbjct: 269 DLFAKRDLSQEDSKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFL 328

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA    V  AF+IITSD  V  IL+NIFGGIMRCDV+ +GI+ A KE+ I +P+++
Sbjct: 329 DVGGGASVKAVKEAFRIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIV 388

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G NV+    LI +S L ++   DLD+AA   VH
Sbjct: 389 RLQGTNVNEAKELIKKSKLRILPKDDLDEAAMLSVH 424


>gi|330752479|emb|CBL87428.1| Succinyl-CoA synthetase beta chain [uncultured Flavobacteria
           bacterium]
          Length = 403

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 241/396 (60%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K++L+ + V + +G V  +      AA +  +      +VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKSILQSFGVAIQRGKVADTPEAAHEAAVALAEETGTEWFVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G   E  +    GV +   L  V      ILG  L+T QT   G +VN + + +     G
Sbjct: 61  GVVTETGSH---GVVLAKGLDHVKEKAAGILGGHLVTAQTSKDGKQVNKILIAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L+DR +G    + S +GGMDIE VA+  P  IFK  +DP +G+      
Sbjct: 118 ESEPSEYYMSVLLDRATGHNIIMYSPEGGMDIEAVAEATPHLIFKEEVDPAVGLQGFQSR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L GQA          LY A+   D S+ EINP++   + ++  +DSK+S D N
Sbjct: 178 RIAFNLGLSGQAFKQMVKFTQALYAAYIGCDASMFEINPVLKTSDDKIIAVDSKVSLDGN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL RH D   +RD +EED+ E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 238 ALSRHPDYAAMRDKTEEDATEVEADEAGLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK IL+NIFGGI+RCD + +G++ A K +  
Sbjct: 298 EPANFLDVGGTADAARVEKAFRIILKDPAVKAILVNIFGGIVRCDRVAQGVVDACKNMSD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           IN+P+++RL+G N +   ++I ESGL V +AI L +
Sbjct: 358 INVPIIVRLQGTNAEEAKKIIDESGLEVRSAILLKE 393


>gi|198432563|ref|XP_002131966.1| PREDICTED: similar to succinate-Coenzyme A ligase, GDP-forming,
           beta subunit [Ciona intestinalis]
          Length = 432

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 168/399 (42%), Positives = 247/399 (61%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           +N+ EYQ+K L+  ++V V +  V+ S   A++A + +        VVK+ I AGGRGKG
Sbjct: 36  LNLQEYQSKKLMENFDVNVQRFKVVESAADAKNAAQHILDTNAKELVVKAMILAGGRGKG 95

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +F    +  +GGV + +    V    +++LG  L+TKQT   G  V  + V +  DI RE
Sbjct: 96  KFS---SGLQGGVHLTTDPTKVSDLCKDMLGYNLVTKQTSAEGVTVKKIMVAEALDITRE 152

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y ++L+DR+      + S  GGMDIEEVA+  P  IFK  ID   G+       + + L
Sbjct: 153 TYFAILMDRSYMGPVMVGSPAGGMDIEEVAEKTPHLIFKDPIDIDKGIQESQAIKMAENL 212

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              G+      +    LYK F   D + +EINPL    +G +   D+K++FDDNA +R  
Sbjct: 213 GFTGEKLQKAAEQITKLYKLFISVDATQVEINPLGETPDGDVVCFDAKVNFDDNAEFRQK 272

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  + D SE D +E+ A+++ LSYI++DGNI C+VNGAGLAMATMDII+  GG PANFL
Sbjct: 273 EIFLMDDKSESDPKEVVAEENGLSYISMDGNIACLVNGAGLAMATMDIIQHCGGRPANFL 332

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  + +V  AFKI+ SD+ V+ IL+NIFGGI+ C ++  GI+ A KE+ I++PLV+
Sbjct: 333 DLGGGVQEHQVYQAFKIVLSDTKVEAILVNIFGGIVDCKIIANGIVKAGKELNISMPLVV 392

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RLEG NV+    ++ ES L +++A D  DAA+K+V ++K
Sbjct: 393 RLEGMNVNEAKEILKESNLPIVSANDFGDAAEKVVASLK 431


>gi|219848976|ref|YP_002463409.1| succinyl-CoA synthetase subunit beta [Chloroflexus aggregans DSM
           9485]
 gi|254778435|sp|B8GCC9|SUCC_CHLAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219543235|gb|ACL24973.1| succinyl-CoA synthetase, beta subunit [Chloroflexus aggregans DSM
           9485]
          Length = 382

 Score =  308 bits (789), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 175/398 (43%), Positives = 241/398 (60%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ LL +Y +PV  G V  +   A +  + + GP+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQARDLLARYGIPVTGGGVAVTPAEAHAIAEQIGGPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +         +ILG  +        G  V  V V +     RELYL
Sbjct: 57  -------GGVKLAQTPAEAEQVAGQILGMNI-------KGLTVEKVLVAEAISYERELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  +  IAS +GG++IEEVAK  P  I K+   P +G+       L   + L+
Sbjct: 103 SAILDRGSKRITMIASAEGGVEIEEVAKTNPSAIVKIAAHPTMGLLDFQARELAFRIGLR 162

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+AF + D SL EINPL+I  +G L  LDSK+  D++ L+RH D+
Sbjct: 163 DGKQARQFAQIAGALYRAFVESDASLAEINPLVIKNDGNLLALDSKVLLDESGLFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S E   E  A++ ++++I LDGNIGCMVNGAGLAMATMD+IKL GG PANFLD+
Sbjct: 223 AALRDPSAEPEAERRAREADITFIKLDGNIGCMVNGAGLAMATMDVIKLSGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV AA +II SD +VK +L NIFGGI R D + +GIL+A++EV  ++P+V RL
Sbjct: 283 GGGAGKEKVKAALQIILSDPNVKAVLFNIFGGITRVDEVARGILAALEEVPTDVPMVARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N ++G  L+A  G  +I A  L + AQK V A +G
Sbjct: 343 VGTNEEVGRALLA--GSKLIPAATLAEGAQKAVAAARG 378


>gi|221120051|ref|XP_002157521.1| PREDICTED: similar to succinate-CoA ligase, GDP-forming, beta
           subunit, partial [Hydra magnipapillata]
          Length = 406

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 175/395 (44%), Positives = 239/395 (60%), Gaps = 6/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           +N+ EY +K LL  Y + + K  V ++   A    ++L        V+K+QI AGGRGKG
Sbjct: 12  LNLQEYASKKLLAHYGINIQKFDVATTPKEAAKIGRSLMADTADELVIKAQILAGGRGKG 71

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F+      KGGV++   + +V     ++LG  L TKQT P G  V  + V +   I RE
Sbjct: 72  VFEN---GFKGGVKLTKDVNTVEDIASKMLGFRLTTKQTPPNGVLVKKLMVCESLTITRE 128

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+++L+DR +     +AS +GG+DIEEVA+  P KI K  ID   GVT E    +   L
Sbjct: 129 TYIAILMDREANGPVIVASPEGGVDIEEVAEKNPSKILKENIDIEKGVTLEQADRISTFL 188

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             QG+           LY  F   D   +EINP        +   D+KI+FDDNA +R  
Sbjct: 189 NFQGKKHTQASLQIRRLYNLFNGVDAVQVEINPFGETDKDEVVCFDAKINFDDNAKFRQK 248

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I E+ D SE D RE+EA ++NL+YI LDGNI CMVNGAGLAMATMDIIKL GG PANFL
Sbjct: 249 AIFEMDDHSEADPRELEADKYNLNYIPLDGNIACMVNGAGLAMATMDIIKLNGGWPANFL 308

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  ++ V   FK++TSD  V+ IL+NIFGGI+ C V+ +GI  A + + +++P+V+
Sbjct: 309 DLGGGVTENGVYHGFKLLTSDPKVRCILVNIFGGIVDCAVIARGITKAYQSMNLSVPVVV 368

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RLEG NVD   R++ ES + + TA +LDDAA+K V
Sbjct: 369 RLEGTNVDEAKRILTESQMPIKTAENLDDAAKKAV 403


>gi|260910325|ref|ZP_05916999.1| succinyl-CoA ligase subunit beta [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635577|gb|EEX53593.1| succinyl-CoA ligase subunit beta [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 378

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 165/375 (44%), Positives = 231/375 (61%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y VPV   ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGIFASYGVPVDNSILCKTPQEAVEAFKKLGTERCVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   V+     ILG  +        G  V+ + V +  +I  E Y+
Sbjct: 58  -------GGVKLASNEAEVLQHATNILGMDI-------KGFTVDRILVGEAVNIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP +G+T     E    L D 
Sbjct: 104 SIVIDRKSKGAILMLSREGGMDIEAVAKETPEKIFKIAIDPSVGLTDFKAREAAFKLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      LF  LYK F +KD SL EINPL++ K+G+L+ +D+K++FD+NALYRH
Sbjct: 164 MAQVKQAV----PLFQKLYKLFVEKDASLAEINPLVLTKDGQLKAIDAKMTFDNNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI  + + + ++ +E EAK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDIFAMFEPTADEKKEQEAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ +D  V+ +LINIFGGI RCD + +G++ A KE+K ++P+V
Sbjct: 280 LDIGGSSNPQKIVEAMKLLLADKHVRVVLINIFGGITRCDDVAQGLIEAFKELKTDMPIV 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N   G  L+
Sbjct: 340 IRLTGTNEKEGRELL 354


>gi|120435110|ref|YP_860796.1| succinyl-CoA synthetase beta chain [Gramella forsetii KT0803]
 gi|189030244|sp|A0LZD4|SUCC_GRAFK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117577260|emb|CAL65729.1| succinyl-CoA synthetase beta chain [Gramella forsetii KT0803]
          Length = 398

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/402 (42%), Positives = 243/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  + V + +G V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNIHEYQGKEILNSFGVRIQRGTVARNAKEAVEAAKELTEKTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V     EI+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVEEIAGEIIGMNLVTPQTSAEGKKVHQVLVTEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +   E Y+S+L++R +G    + ST+GGMDIE VA++ P+ IF   IDP  G+      
Sbjct: 111 DNEPEEYYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPELIFTEEIDPATGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+   +      +LY+AF   D SL EINP++   +  +  +D+K++ DDN
Sbjct: 171 RIAFNLGLSGKGFKEMTKFVMSLYEAFEKSDSSLFEINPVLKTSDDLIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D  E+RDV EE++ E+EA++  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAEMRDVREENATEVEAREVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF++I  D  V+ IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRLILKDDKVEAILVNIFGGIVRCDRVAQGIVDASKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            +N+P+++RL+G N DI   LI  SGL V +AI   +AA K+
Sbjct: 351 AMNVPIIVRLQGTNADIAKELIDNSGLKVSSAIQFQEAADKV 392


>gi|313203888|ref|YP_004042545.1| succinyL-CoA synthetase, beta subunit [Paludibacter propionicigenes
           WB4]
 gi|312443204|gb|ADQ79560.1| succinyl-CoA synthetase, beta subunit [Paludibacter propionicigenes
           WB4]
          Length = 384

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 168/394 (42%), Positives = 246/394 (62%), Gaps = 30/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ L RKY +PV + V+  +V   E A K L   + VVK+Q+  GGRGK    
Sbjct: 1   MKIHEYQARQLFRKYGIPVPEDVLCYTVSEVEKAAKDL-NRMVVVKAQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +++  +S  ++ILG  +        G +V  V V D  DI +E Y+
Sbjct: 57  -------GGVKLARNVEDAVSAAKQILGMDI-------KGYKVEKVLVADAVDISKEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
            L+ DR S  V  +AS++GG++IEEVAK+ P+KI K  I+PL G+    + D+A     L
Sbjct: 103 GLINDRNSKTVTLMASSEGGVEIEEVAKENPEKIIKFHINPLTGLLDYQARDIA-----L 157

Query: 178 ELQGQARI--DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           +L G+ +       +F  LYK + + D ++ EINPL++  +  +  +D K++FDDNAL+R
Sbjct: 158 QLFGEIKTAQKAASIFKKLYKLYVETDATIAEINPLVLTPDNEVLAIDGKMNFDDNALFR 217

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             +I  +R+  E++  EI+A    LSYI LDGNIGCMVNGAGLAMATMD+IKLYGG PAN
Sbjct: 218 QPEILAMREPDEDELVEIDAHSKGLSYIRLDGNIGCMVNGAGLAMATMDMIKLYGGEPAN 277

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD+GG +   KV  A  I+ +D  VK ++INIFGGI RCD + KG++ A++ +  +IP+
Sbjct: 278 FLDIGGSSSPQKVIDAMNILLNDKHVKAVMINIFGGITRCDDVAKGLIKAMEVISTDIPI 337

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           V+RL G N   G  L+ ++ L  +++  + +AAQ
Sbjct: 338 VVRLSGTNAAEGLELLKQTNLPTVSS--MSEAAQ 369


>gi|326335853|ref|ZP_08202032.1| succinyl-CoA synthase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691997|gb|EGD33957.1| succinyl-CoA synthase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 397

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 172/402 (42%), Positives = 243/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V +S    V AAE   +      YVVK+QIHA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVATSADEAVKAAEKLTEQTGTQWYVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QT   G  V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQQVKEISSQIIGMHLVTPQTPKEGKEVHQVLIAEDVFYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA + P  IF   +DP +G+      
Sbjct: 111 ESEPKEYYMSILLNRAKGKNMIMYSTEGGMDIESVAANTPHLIFTEEVDPELGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L L+G+A  +      +LYKA+   D +L EINPL+   + ++  +D+K++ DDN
Sbjct: 171 NIAFNLGLEGEAFKEMVKFVTSLYKAYISSDANLFEINPLLKTSDSKILAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   LRD  EE   E+EAK   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAALRDTREERPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAARVETAFRIILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGS 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N +I   +I +SGL V +AI   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAEIAKEIIDKSGLAVHSAIQFQEAADKV 392


>gi|255536400|ref|YP_003096771.1| succinyl-CoA synthetase subunit beta [Flavobacteriaceae bacterium
           3519-10]
 gi|255342596|gb|ACU08709.1| Succinyl-CoA ligase [ADP-forming] beta chain [Flavobacteriaceae
           bacterium 3519-10]
          Length = 398

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/402 (43%), Positives = 244/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA---IKTLPGPL--YVVKSQIHAGGRG 55
           MN+HEYQ+K +L KY V + +G V ++V  A  A   +K + G    +VVK+Q+HA    
Sbjct: 1   MNLHEYQSKEILAKYGVTIQRGFVANNVEEAVDAANKLKEMTGGAEGWVVKAQVHA---- 56

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED----- 110
                       GGV+   +L+ +  + + I+G  L+T QT   G  VN V V +     
Sbjct: 57  ------GGRGKGGGVKFSPNLEKLKENAQNIIGMQLVTPQTSAEGKLVNSVLVAEDVYYP 110

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
           GA   +E Y+S+L+DR  G    + ST+GGMDIE VA+  P  I    IDP  G+     
Sbjct: 111 GASETKEFYVSILLDRAQGKNMIVYSTEGGMDIEHVAEVTPHLIHNETIDPATGLQGFQA 170

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             +   L L G A  D      +LY A+   D SL EINP++   + R+  +D+K+S DD
Sbjct: 171 RKIAFNLGLSGAAFKDFTKFITSLYNAYVGIDASLFEINPVLKTSDDRIIAVDAKVSLDD 230

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NAL+RH D+ ELRD  EED  ++EA +  L+++ LDG++ CMVNGAGLAMATMDIIKL G
Sbjct: 231 NALFRHKDLAELRDTREEDPTDVEAGEAGLNFVKLDGDVACMVNGAGLAMATMDIIKLSG 290

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
           G PANFLDVGG AD ++V  AF II  D +VK ILINIFGGI+RCD + +GI+ A K + 
Sbjct: 291 GNPANFLDVGGTADAERVQKAFGIILKDPNVKAILINIFGGIVRCDRVAQGIVDAYKAMG 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            + +PL++RL+G N     +LI +SGL V + I L++AA K+
Sbjct: 351 SLPVPLIVRLQGTNAVEAKQLIDDSGLPVHSVITLEEAANKV 392


>gi|298208275|ref|YP_003716454.1| Succinyl-CoA synthetase, beta subunit [Croceibacter atlanticus
           HTCC2559]
 gi|83848196|gb|EAP86066.1| Succinyl-CoA synthetase, beta subunit [Croceibacter atlanticus
           HTCC2559]
          Length = 397

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 168/402 (41%), Positives = 244/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVEIQRGIVAQTPQEAVEAAKKLTEQTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S   +I+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVESISNDIIGMNLVTPQTSKEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+ +L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMGVLLNRATGKNMVMYSTEGGMDIETVAEETPHLIFTEEIDPATGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+GQA          LYKA+ + D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLKGQAFKQMTKFVTALYKAYMESDSSMFEINPVLKTSDDKIIAVDAKVTLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD+ EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAAMRDIREENPTEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           +PANFLDVGG AD  +V AAF++I  D  VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 SPANFLDVGGTADAARVEAAFRLILKDPEVKAILINIFGGIVRCDRVAQGVVDAYKAMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            + +P+++RL+G N DI   LI  SGL V +AI+  +AA K+
Sbjct: 351 AVKVPIIVRLQGTNADIAKELIDNSGLPVQSAIEFKEAADKV 392


>gi|291393975|ref|XP_002713343.1| PREDICTED: succinate-CoA ligase, GDP-forming beta subunit
           [Oryctolagus cuniculus]
          Length = 432

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 168/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVANTASEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++  SGL + +A+DL+D
Sbjct: 395 GTNVQEAQRILNNSGLPITSAVDLED 420


>gi|303236646|ref|ZP_07323227.1| succinate-CoA ligase, beta subunit [Prevotella disiens FB035-09AN]
 gi|302483150|gb|EFL46164.1| succinate-CoA ligase, beta subunit [Prevotella disiens FB035-09AN]
          Length = 377

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 168/386 (43%), Positives = 234/386 (60%), Gaps = 25/386 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV +G+V  +   A  A + L   L V+K+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKEFFASYGIPVQRGIVCRTPEEAVKAYEELGVELAVIKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V +    ILG  +        G  V+ V V    DI  E Y+
Sbjct: 58  -------GGVKLGKTAEEVRTHATNILGMDI-------KGFIVDRVLVCAALDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+L DR S    F+ S +GGMDIE VAK+ P+KI K+ +DP +G+T     E    L D 
Sbjct: 104 SILPDRKSKTAIFMVSREGGMDIEAVAKETPEKIAKISVDPTVGLTDAKAREIAFELFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           ++   QA      LF  LY+ F +KD SL EINPL+I + G +  +D+K++FD+NAL+RH
Sbjct: 164 MQYVKQAV----PLFKKLYQLFLEKDASLTEINPLVITEQGEVVAVDAKMTFDNNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + +E++ +E  AK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVFELFEPTEDEKKEQFAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ SD  VK +LINIFGGI RCD + KG++ A K +  N+P+V
Sbjct: 280 LDIGGSSNPTKIVEAMKLLLSDEHVKVVLINIFGGITRCDDVAKGLIEAFKLIDTNMPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAI 382
           +RL G N   G  L+  +  +V T +
Sbjct: 340 IRLTGTNEAEGRELLKGTKFHVATTM 365


>gi|3821927|gb|AAC69705.1| ATP-specific succinyl-CoA synthetase beta subunit [Columba livia]
          Length = 413

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 243/392 (61%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  GVV  +   A    K +     V+K+Q+ AGGRGKG F+
Sbjct: 3   LSLHEYLSMGLLQEAGISVPHGVVARTPDEAYKIAKEIGSKDLVIKAQVLAGGRGKGTFE 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +   +    ++G  L TKQTG  G   N V+V +     RE Y 
Sbjct: 63  ---GGLKGGVKIVFSPEEAKAVSSRMIGKKLFTKQTGEKGRICNQVFVCERRYPRREYYF 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 120 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQAVRLAQKMGFP 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 180 SNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 240 DMQDWTQEDERDRQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ + IP+V+RL+
Sbjct: 300 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVVAVKDLDLKIPVVVRLQ 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI  SGL ++   DLD+AA+ +V
Sbjct: 360 GTRVDDAKALITASGLKILACDDLDEAAKMVV 391


>gi|288929101|ref|ZP_06422947.1| succinyl-CoA synthase, beta subunit [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330085|gb|EFC68670.1| succinyl-CoA synthase, beta subunit [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 378

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/375 (44%), Positives = 231/375 (61%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y VPV   ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGIFASYGVPVDNSILCKTPQEAVEAFKKLGTERCVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   V+     ILG  +        G  V+ + V +  +I  E Y+
Sbjct: 58  -------GGVKLASNEAEVLQHATSILGMDI-------KGFIVDRILVGEAVNIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDM 176
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP +G+T     E    L D 
Sbjct: 104 SIVIDRKSKGAILMLSREGGMDIEAVAKETPEKIFKIAIDPSVGLTDFKAREAAFKLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      LF  LYK F +KD SL EINPL++ K+G+L+ +D+K++FD+NALYRH
Sbjct: 164 MAQVKQAV----PLFQKLYKLFVEKDASLAEINPLVLTKDGQLKAIDAKMTFDNNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI  + + + ++ +E EAK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDIFAMFEPTADEKKEQEAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ +D  V+ +LINIFGGI RCD + +G++ A KE+K ++P+V
Sbjct: 280 LDIGGSSNPQKIVEAMKLLLADKHVRVVLINIFGGITRCDDVAQGLIEAFKELKTDMPIV 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N   G  L+
Sbjct: 340 IRLTGTNEKEGRELL 354


>gi|156380885|ref|XP_001631997.1| predicted protein [Nematostella vectensis]
 gi|156219047|gb|EDO39934.1| predicted protein [Nematostella vectensis]
          Length = 436

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 175/398 (43%), Positives = 245/398 (61%), Gaps = 9/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-----YVVKSQIHAGGRG 55
           +++HE+ +  +L+   +   KG V  +   A   I T+ G        VVK+Q+ AGGRG
Sbjct: 22  LSVHEHHSMKILQDAGILTPKGGVARTAEQAYE-IATVLGESEVEGDMVVKAQVLAGGRG 80

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           KG+F+      KGGVR+  S          ++G  L TKQTG  G   N V+V +     
Sbjct: 81  KGKFE---GGLKGGVRIVFSADEAKEVASRMIGKKLFTKQTGELGRVCNEVFVCERLYAR 137

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           RE Y +L ++R       + S QGG+DIE VAK+ P  I K  +D + G+  ++  +   
Sbjct: 138 REYYFALALERKYQGPVLVGSQQGGVDIESVAKETPDAIIKQPVDIISGLKIDEARTFAR 197

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            +           D    +Y  F  +D  LLEINP+     GR+  +D K+ FDDNA YR
Sbjct: 198 RMGFSPSCVDQAADWMMRMYDIFMSRDAVLLEINPMSEDLLGRVVCMDCKLLFDDNASYR 257

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             ++ +LRD S++D RE+EA +HNL+YI LDG+IGC+VNGAGLAMATMDII+L+GG PAN
Sbjct: 258 QQEVFDLRDWSQDDPREVEAAKHNLNYIGLDGSIGCLVNGAGLAMATMDIIQLHGGEPAN 317

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD+GGGA  ++V AAFKIIT DS V  IL+NIFGGIMRCD++ +GI++A KE+ ++IP+
Sbjct: 318 FLDIGGGASIEQVEAAFKIITEDSKVHAILVNIFGGIMRCDIIAEGIIAAAKELNLSIPI 377

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           V+RL+G  V+    LIA SGL +I   DL+DAA+ +V 
Sbjct: 378 VVRLQGTRVEDAKALIAASGLRIIACDDLEDAAEMVVR 415


>gi|68071999|ref|XP_677913.1| ATP-specific succinyl-CoA synthetase beta subunit, [Plasmodium
           berghei strain ANKA]
 gi|56498203|emb|CAH97433.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium berghei]
          Length = 458

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 161/396 (40%), Positives = 249/396 (62%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPL-YVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +          ++ + G +  V+K+QI +GGRG 
Sbjct: 46  LSIHEYMSIDLLRNNNIPCPQGYHAQTPEEAEEKALELQNICGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPDGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE+++K  P+ I+K+ I+   G+T       C+ 
Sbjct: 164 ERYVAFLLDRNSDSICLLGSSVGGSSIEDISKKTPEAIYKININIKDGLTDGQSREFCEQ 223

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +G       ++  NLYK F   D +LLEINPL    + R+   D+K++FDDNA YR 
Sbjct: 224 IGFKGNELDIATNMVVNLYKIFKKYDCTLLEINPLSETNDRRVLCCDAKLNFDDNAEYRQ 283

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E RD+++E+  E+EAK++NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 284 KEIFEKRDLTQENPEELEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNF 343

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A ++++A A KII ++   K   INI GGIMRCD++ +GI++A K++K   PL+
Sbjct: 344 LDVGGSATENEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIKFKKPLI 403

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RLEG N     ++I ES +  I   D++ AA+K V
Sbjct: 404 IRLEGTNEKEAIKIIEESKIKCIICQDMNLAAEKAV 439


>gi|74192578|dbj|BAE43068.1| unnamed protein product [Mus musculus]
 gi|74196736|dbj|BAE43106.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 232/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTTKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 99  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLED 421


>gi|165972309|ref|NP_035637.2| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           precursor [Mus musculus]
 gi|85681897|sp|Q9Z2I8|SUCB2_MOUSE RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|74189034|dbj|BAE39282.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 232/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 99  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLED 421


>gi|332878190|ref|ZP_08445919.1| succinate-CoA ligase, beta subunit [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683928|gb|EGJ56796.1| succinate-CoA ligase, beta subunit [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 398

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 173/402 (43%), Positives = 243/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V  +    V AA+   +T     YVVK+QIHAGG   
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAQTPAEAVAAAKELTETTGTKWYVVKAQIHAGG--- 57

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++   L+ V     +I+G  LIT QT PTG  V+ V + +     G
Sbjct: 58  -------RGKGGGVKLAKGLQDVEPLASQIIGMHLITPQTPPTGKEVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R  G    + ST+GGMDIE VA   P  IF   IDP +G+      
Sbjct: 111 ESEPAEFYMSVLLNRAKGKNMIMYSTEGGMDIETVAAQTPHLIFTEEIDPAVGLQPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A+ D       LY A+   D +L EINP++   + ++  +D+K+  DDN
Sbjct: 171 QIAFNLGLSGEAQKDMVKFVTALYNAYVSSDANLFEINPVLKTSDNKILAVDAKVVLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD+ EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDIREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKV 392


>gi|194388002|dbj|BAG61414.1| unnamed protein product [Homo sapiens]
          Length = 405

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 170/383 (44%), Positives = 240/383 (62%), Gaps = 3/383 (0%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+   +  KGGV
Sbjct: 5   LLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE---SGLKGGV 61

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
           ++  S +   +   +++G  L TKQTG  G   N V V +     RE Y ++ ++R+   
Sbjct: 62  KIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQG 121

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
              I S++GG++IE+VA + P+ I K  ID   G+  E    L   +           + 
Sbjct: 122 PVLIGSSRGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAEN 181

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
              LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED 
Sbjct: 182 MVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDE 241

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  
Sbjct: 242 RDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTE 301

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    L
Sbjct: 302 AFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKAL 361

Query: 371 IAESGLNVITAIDLDDAAQKIVH 393
           IA+SGL ++   DLD+AA+ +V 
Sbjct: 362 IADSGLKILACDDLDEAARMVVK 384


>gi|332841276|ref|XP_003314186.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Pan troglodytes]
 gi|119629183|gb|EAX08778.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_d
           [Homo sapiens]
 gi|221045930|dbj|BAH14642.1| unnamed protein product [Homo sapiens]
          Length = 405

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 170/382 (44%), Positives = 239/382 (62%), Gaps = 3/382 (0%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+   +  KGGV
Sbjct: 5   LLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE---SGLKGGV 61

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
           ++  S +   +   +++G  L TKQTG  G   N V V +     RE Y ++ ++R+   
Sbjct: 62  KIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQG 121

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
              I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +           + 
Sbjct: 122 PVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAEN 181

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
              LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED 
Sbjct: 182 MVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDE 241

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  
Sbjct: 242 RDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTE 301

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    L
Sbjct: 302 AFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKAL 361

Query: 371 IAESGLNVITAIDLDDAAQKIV 392
           IA+SGL ++   DLD+AA+ +V
Sbjct: 362 IADSGLKILACDDLDEAARMVV 383


>gi|146181817|ref|XP_001023435.2| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila]
 gi|146144022|gb|EAS03190.2| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 429

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 169/399 (42%), Positives = 250/399 (62%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRF 59
            ++HEYQ+K ++RK+N+ V KG +  +   A    + L P    ++K+Q+HAGGRGKG  
Sbjct: 22  FDLHEYQSKDIMRKFNIRVQKGDIALTPEQARKVAEPLDPTGGLILKAQVHAGGRGKGH- 80

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +  KGGV+V  + + V +  ++++G  LIT QT   G RV+ V V +G DI+R++Y
Sbjct: 81  --LTSGLKGGVKVLKTPQEVETYTKQMIGYNLITHQTPKAGLRVDAVLVHEGVDIVRQIY 138

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+ ++DR S   A +AS  GG+DIEEVAK +P+ I    I P  G+T  D+ ++   L+L
Sbjct: 139 LAFILDRNSQKPAIVASVNGGVDIEEVAKTHPESIIVQPICPSAGLTDADLNTVISKLQL 198

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              A  D      NLY+ F   D + +EINP       +L  +D+KI+ DDNA +R  ++
Sbjct: 199 THIAE-DAKTQIKNLYQMFNKLDATQVEINPWATDPKDKLYCVDAKINIDDNAKFRQQEL 257

Query: 240 QELR--DVSEED--SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            +LR   V+ ED    E +A Q  L+Y+ALDGNIGC+VNGAGLAM TMDIIKL GG+PAN
Sbjct: 258 VQLRKNSVASEDVDPHEEKAIQAGLAYVALDGNIGCLVNGAGLAMGTMDIIKLCGGSPAN 317

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA+ ++V  AF+I+ +   V+ + INIFGGI+ C ++ +GI+ A + V + +PL
Sbjct: 318 FLDVGGGANVEQVKTAFEILNAHPKVETVFINIFGGILSCKLIAEGIIKAAQLVSLRVPL 377

Query: 356 VMRLEGANVDIGNRLIAE-----SGLNVITAIDLDDAAQ 389
           V+RL G   D+G +L+ E       + +    DL D+A+
Sbjct: 378 VVRLSGNQADVGRKLLLEFTDKNPSIKIRVGQDLGDSAE 416


>gi|60099069|emb|CAH65365.1| hypothetical protein RCJMB04_22i13 [Gallus gallus]
          Length = 463

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 243/392 (61%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V  S   A    K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMGLLQEAGISVPHGLVAKSPEEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAKDISSKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DMQDWTQEDERDRDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ + IP+V+RL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDLKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI  SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALITASGLKILACDDLDEAAKMVV 441


>gi|298712066|emb|CBJ26646.1| beta chain succinyl-coa synthetase synthetase [Ectocarpus
           siliculosus]
          Length = 463

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 162/392 (41%), Positives = 243/392 (61%), Gaps = 9/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIHAGGRGK 56
           +N+HEY +  ++ ++++ +    +  +   AE A   + G       V+K+Q+ +GGRG+
Sbjct: 46  LNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGR 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F       + GV +            E+LG  LITKQTG  G   + V + +   + R
Sbjct: 106 GHFDN---GFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRR 162

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+YLS+++DR S     +A   GG  IE++A+  P+ I K  +D + G+T      + + 
Sbjct: 163 EMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEH 222

Query: 177 LELQ--GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           L+L   G +   G  L  N+Y  F ++D +L+EINPL     GR+   D+K++FDDNA +
Sbjct: 223 LKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEW 282

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R  D  + RD ++ED+RE+EA +++L+YI L GNIGCMVNGAGLAM+TMDIIKL GG PA
Sbjct: 283 RQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPA 342

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA +++V  AF+++ +D  V  IL+NIFGGIMRCDV+  G+++A K + +  P
Sbjct: 343 NFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKP 402

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +V+RL+G NV+  N LIA SG  +I + DLDD
Sbjct: 403 IVIRLQGTNVEQANELIANSGFKMIISNDLDD 434


>gi|149635784|ref|XP_001513628.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 464

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 169/392 (43%), Positives = 241/392 (61%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G V  +   A S  + L     V+K+Q+ AGGRGKG F+
Sbjct: 54  LSLHEYLSMELLQEAGISVPSGQVAKTPEEAYSIAQKLGSKDVVLKAQVLAGGRGKGTFE 113

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 114 ---GGLKGGVKIVFSPEEAKKISSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 170

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 171 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIVKEPIDIMEGIKKEQAVRLAQKMGFP 230

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 231 ANLVDPAAENMMKLYNLFMKYDATMVEINPMVEDADGVVLCMDAKINFDSNSAYRQKKIF 290

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 291 DLQDWTQEDQRDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 350

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ I IP+V+RL+
Sbjct: 351 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDITIPIVVRLQ 410

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI  SGL ++   DLD+AA+ +V
Sbjct: 411 GTRVDDAKALITASGLKILACDDLDEAAKMVV 442


>gi|164656989|ref|XP_001729621.1| hypothetical protein MGL_3165 [Malassezia globosa CBS 7966]
 gi|159103514|gb|EDP42407.1| hypothetical protein MGL_3165 [Malassezia globosa CBS 7966]
          Length = 426

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 165/387 (42%), Positives = 233/387 (60%), Gaps = 4/387 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL KY +   K         A  + K   G   VVK+Q+ AGGRGKG F 
Sbjct: 32  LSIHEYLSMGLLNKYGINTPKFFPAKDSDEAYLSTKKFDGKPVVVKAQVLAGGRGKGHFD 91

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV +  S +       +++GS LITKQTG  G   N V + +      E Y+
Sbjct: 92  N---GLQGGVHLVKSAEEARDLTGKMVGSKLITKQTGAAGRVCNSVMIAEARTPKHEYYV 148

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR   +   IAS QGGM IEEVAK+ P  I    ID   G+  E    +   L   
Sbjct: 149 AILNDRVRQLPVLIASNQGGMSIEEVAKENPDAIITTPIDYTKGLDMETAKQVAHKLGFS 208

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G Q   +  D F  LYK F ++D + +EINPL   ++G +  +D+K+ FD++A +R  ++
Sbjct: 209 GEQQENEAADTFVKLYKLFRERDATQVEINPLAESEDGAVLCMDAKLGFDEHADFRQKEV 268

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E+RD+++ED  E+ A ++ L++I LDGNIGC+VNGAGLAMAT+D++ L GG PANFLDV
Sbjct: 269 FEMRDLTQEDPSEVRASRYGLNFIKLDGNIGCLVNGAGLAMATLDLLSLNGGKPANFLDV 328

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+ + V  AF+I+     V+ IL+NIFGGIMRCDV+ +GI+ A KE+++ IPLV+RL
Sbjct: 329 GGGANAEAVKKAFEIVLEGEGVRAILVNIFGGIMRCDVIAEGIIKATKEMELKIPLVVRL 388

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
           +G        LI +SGL +    DLD+
Sbjct: 389 QGTKEQEAKELIRQSGLKIQAYNDLDE 415


>gi|57100954|ref|XP_533767.1| PREDICTED: similar to Succinyl-CoA ligase [GDP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, betaG
           chain) (SCS-betaG) (GTP-specific succinyl-CoA synthetase
           beta subunit) [Canis familiaris]
          Length = 432

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 167/395 (42%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L    +V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKKLNAKEFVLKAQILAGGRGKGVFS 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPQVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+D++      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 155 AILMDQSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIMEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIILLKGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIF GI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFAGIVNCAIIANGITKACQELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     +++ S L + +A+DL+DAA+K V +V
Sbjct: 395 GTNVHEARNILSNSRLPITSAVDLEDAAKKSVASV 429


>gi|124809017|ref|XP_001348469.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium falciparum 3D7]
 gi|23497363|gb|AAN36908.1|AE014820_58 ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium falciparum 3D7]
          Length = 462

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 167/400 (41%), Positives = 248/400 (62%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           ++IHEY +  LLR +NVP  +G    +   AE     L         V+K+Q+ +GGRG 
Sbjct: 50  LSIHEYLSVDLLRSHNVPCPEGYAAKTAEEAEEKALLLQNVCGDNDLVIKAQVLSGGRGV 109

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   + +GGV V  +   V     ++L +TLITKQ+GP G + N V++ +   I +
Sbjct: 110 GYFKE--NNFEGGVHVCRNSMEVKEIATKMLNNTLITKQSGPEGKKCNTVFICERFYIRK 167

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE++ K  P  I+KL ID   G+T+       + 
Sbjct: 168 ERYIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDINNGLTTGQAREFSEN 227

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +        D+  NLYK F   D +LLEINPL  + +GR+   D+K++FDDNA YR 
Sbjct: 228 IGFKNDQLNIVTDMIVNLYKVFKKYDCTLLEINPLSELNDGRVLCCDAKLNFDDNAEYRQ 287

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E RD+++E+  E+ AK++NL+Y++L+GNI CMVNGAGLAMAT+D+I L+ G P+NF
Sbjct: 288 KNIFEKRDLTQENKEELLAKKYNLNYVSLNGNIACMVNGAGLAMATLDLIILHKGNPSNF 347

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA ++++  A KII ++ + K   INI GGIMRCD++  GI++A K+VK N P++
Sbjct: 348 LDVGGGATEEEITEALKIINNNENAKICFINILGGIMRCDIIANGIINAFKQVKFNKPII 407

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG N +  + +I  S +  I   D++ AAQK V   K
Sbjct: 408 IRLEGTNQEQAHEIIKNSNIKCIVCQDMNIAAQKSVAMAK 447


>gi|50287783|ref|XP_446321.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525628|emb|CAG59245.1| unnamed protein product [Candida glabrata]
          Length = 419

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 167/395 (42%), Positives = 239/395 (60%), Gaps = 6/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLRKY V   +G+   +   A  A + L     V+K+Q   GGRGKG F 
Sbjct: 23  LSIHEYRSAELLRKYGVGTPRGLPAMTPEEAAKAAEQLGTDKLVIKAQALTGGRGKGHFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV + SS +      +E+L   LITKQTG  G  V+ VY+ +  +   E YL
Sbjct: 83  ---TGFKSGVHMISSPQEASKLAKEMLQHKLITKQTGEKGKLVSAVYIAERVETKHEAYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +G    I S++GGM+IEEVA+  P  I K  I    G+  E    + + L   
Sbjct: 140 SILMDRATGKPMIICSSEGGMNIEEVAEKNPDAIKKFSITVSEGLKPETAREIAESLGFS 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR---LRVLDSKISFDDNALYRHL 237
             A  D  D    LYK F + D + +EINPL  + N +   +   D+K  FDDNA ++  
Sbjct: 200 ADAIDDAQDAVSKLYKIFSETDATQVEINPLSEIANNKDHKVMCTDAKFGFDDNAFFKQE 259

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I   RD+++ED  E+ AK++ L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 260 EIFSWRDLTQEDPDEVSAKKYELNFVKLFGNIGCLVNGAGLAMATMDVIKLNGGEPANFL 319

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+  V  I +NIFGGI+RCD +  G++ A KE+ + IP+V 
Sbjct: 320 DCGGGATPETIKEGFRLIMSNDKVDAIFVNIFGGIVRCDFVALGLVEAAKELGLRIPIVA 379

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL+G N+D G ++I +SGL + +  +LD AA+K+V
Sbjct: 380 RLQGTNLDEGRQIIKDSGLKIYSFDELDPAAKKVV 414


>gi|254584448|ref|XP_002497792.1| ZYRO0F13596p [Zygosaccharomyces rouxii]
 gi|238940685|emb|CAR28859.1| ZYRO0F13596p [Zygosaccharomyces rouxii]
          Length = 427

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 165/397 (41%), Positives = 243/397 (61%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR Y V   +G    +   A    + L     VVK+Q   GGRGKG F 
Sbjct: 25  LSIHEYRSSQLLRDYGVGTPRGEAADNASDALKIAQNLKSDKLVVKAQALTGGRGKGHF- 83

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  + G+ + S  +       ++L   LITKQ+G  G  V+ VYV +  +   E 
Sbjct: 84  ----DSGLQSGIHIISKPEQAQDLASQMLKHRLITKQSGEKGKPVSAVYVVECVNAAHES 139

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR++  +  I S++GGM+IEEVAK  P  I K  I P  G+T E    +   L 
Sbjct: 140 YLSILMDRSTKKILIICSSEGGMNIEEVAKSNPDAIKKFYITPSEGITEETARQVGASLG 199

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL---IIMKNGRLRVLDSKISFDDNALYR 235
              +A  +  D    LYK + ++D + +EINPL   I   N ++  +D+K  FDDNA +R
Sbjct: 200 FSKEAEAEAADAVTKLYKIYTERDATQIEINPLSEVIGDANHKVMCMDAKFGFDDNASFR 259

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             ++   RDVS+ED  E+ AKQ +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PAN
Sbjct: 260 QQEVYSWRDVSQEDPDEVLAKQSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPAN 319

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GGGA  + +  AF++I S+  V  I +NIFGGI+RCD + +G+++A KE+ +++P+
Sbjct: 320 FLDCGGGATPETIKKAFELILSNKKVDAIFVNIFGGIVRCDYVAEGLVNAAKELGVDVPI 379

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + RL+G N++ G  +I +SG  + +  +LD AA++ V
Sbjct: 380 IARLQGTNLEEGQAIIEKSGFKIFSFEELDPAAERAV 416


>gi|9955022|pdb|1EUD|B Chain B, Crystal Structure Of Phosphorylated Pig Heart,
           Gtp-Specific Succinyl-Coa Synthetase
          Length = 396

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 169/395 (42%), Positives = 237/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 2   VNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 62  ---SGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 119 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 179 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 239 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+   ++  GI  A +E+++ +PLV+RLE
Sbjct: 299 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNXAIIANGITKAXRELELKVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 359 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 393


>gi|9955020|pdb|1EUC|B Chain B, Crystal Structure Of Dephosphorylated Pig Heart, Gtp-
           Specific Succinyl-Coa Synthetase
          Length = 396

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 169/395 (42%), Positives = 237/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 2   VNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 62  ---SGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 119 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 179 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 239 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+   ++  GI  A +E+++ +PLV+RLE
Sbjct: 299 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNXAIIANGITKACRELELKVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 359 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 393


>gi|33150622|gb|AAP97189.1|AF087890_1 beta-succinyl CoA synthetase [Homo sapiens]
          Length = 403

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 170/382 (44%), Positives = 239/382 (62%), Gaps = 3/382 (0%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+   +  KGGV
Sbjct: 3   LLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE---SGLKGGV 59

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
           ++  S +   +   +++G  L TKQTG  G   N V V +     RE Y ++ ++R+   
Sbjct: 60  KIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQG 119

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
              I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +           + 
Sbjct: 120 PVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAEN 179

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
              LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED 
Sbjct: 180 MVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDE 239

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  
Sbjct: 240 RDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTE 299

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    L
Sbjct: 300 AFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKAL 359

Query: 371 IAESGLNVITAIDLDDAAQKIV 392
           IA+SGL ++   DLD+AA+ +V
Sbjct: 360 IADSGLKILACDDLDEAARMVV 381


>gi|158297958|ref|XP_318074.3| AGAP004744-PA [Anopheles gambiae str. PEST]
 gi|157014577|gb|EAA13239.4| AGAP004744-PA [Anopheles gambiae str. PEST]
          Length = 446

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 173/393 (44%), Positives = 237/393 (60%), Gaps = 4/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + + L +  +P  K  V +S   A+     L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYSFLNEAGIPTPKFGVATSGAEAKKIATDLNTKNLVLKAQVLAGGRGKGSFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPQEAEDISGKMINQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+  E    +   + L 
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDINKGLQKEQAVQVAKKVGLN 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +  N+Y  F  KD  L+EINP           LD+K+ FDDNA +R  D+ 
Sbjct: 210 DKVE-ETAKMLLNMYDLFVKKDALLIEINPYAEDAAETYFALDAKMRFDDNAEFRQKDLF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+ED +E+EA + +L+YIALDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 AKRDLSQEDKKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSD  V  IL+NIFGGIMRCDV+ +GI+ A KE+ I +P+++RL+
Sbjct: 329 GGASVKAVKEAFKIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+    LI +S L ++   DLD+AA   VH
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAMLSVH 421


>gi|148708892|gb|EDL40839.1| mCG49734 [Mus musculus]
          Length = 433

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 99  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAVSSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNITCFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     +   SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNIFKSSGLPITSAVDLED 421


>gi|323507901|emb|CBQ67772.1| probable beta-succinyl CoA synthetase precursor [Sporisorium
           reilianum]
          Length = 426

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 167/399 (41%), Positives = 240/399 (60%), Gaps = 8/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  +L KY + V K V   +   A  A ++  G   V+K+Q+ AGGRGKG F 
Sbjct: 29  LSIHEHLSMDVLTKYGINVPKYVAAKTPDEAYKAAQSFGGKEIVIKAQVLAGGRGKGHF- 87

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  +GGV +  + +       +++G+ LITKQTG  G   N V + +      E 
Sbjct: 88  ----DSGLQGGVHLIKTPEEARDLAAKMIGNKLITKQTGAAGRLCNAVMIAEARPPHHEY 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++L DR + +   IAS QGGM IEEVA + P  I    ID   G++ ED   +   L 
Sbjct: 144 YVAVLNDRATQLPVLIASNQGGMSIEEVAAENPDAIITTPIDFEKGLSKEDALGIAKKLG 203

Query: 179 LQG-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             G +      + F  LYK F +KD + +EINPL   K+G +  +D+K+ FD+NA +R  
Sbjct: 204 FTGVKQEEQAAETFQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQA 263

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+ ELRD ++ED  E+EA ++ L++I LDGNIGC+VNGAGLAMATMD++KL GG PANFL
Sbjct: 264 DVFELRDTTQEDPDEVEAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFL 323

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A    V  AF+++ + + VKGI +NIFGGI+ C  + +GI+ A +E+ + IPLV+
Sbjct: 324 DVGGTASASSVKKAFELLLNSNEVKGIFVNIFGGIVSCKKIAEGIIQATQELDLTIPLVV 383

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G +      LI  S L +     LD+AA K V + K
Sbjct: 384 RLQGTHEKEAKELIKSSNLKIFAFDGLDEAAAKAVESAK 422


>gi|327261083|ref|XP_003215361.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 463

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 163/392 (41%), Positives = 244/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V ++   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMELLKEAGISVPHGLVANTPEDAYNVAKQIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +        ++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAREISSRMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P  I K  +D + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSAQGGVNIEDVAAENPDAIAKEPVDIVEGIQKEQAIRLAKKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    +Y  F   D +++EINP++    G +  +D+KI+FD N+ YR   I 
Sbjct: 230 ANLVNEAAENMIKIYNLFIKFDATMVEINPMVEDSTGIVMCMDAKINFDSNSAYRQQKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D ++ED R+ +A + +L+YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 SLQDWTQEDDRDRDAAKSDLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AF++ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK++++ IP+V+RL+
Sbjct: 350 GGATAQRVTEAFRLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVKDLELKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI +SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALITDSGLKILACDDLDEAAKMVV 441


>gi|148658028|ref|YP_001278233.1| succinyl-CoA synthetase subunit beta [Roseiflexus sp. RS-1]
 gi|189081790|sp|A5V080|SUCC_ROSS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148570138|gb|ABQ92283.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Roseiflexus sp.
           RS-1]
          Length = 379

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 167/397 (42%), Positives = 244/397 (61%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ +L +Y +PV  G V ++   A +  + + G + VVK+Q+  GGRGK    
Sbjct: 1   MKLHEYQARDILARYGIPVTGGGVATTPAEARTIAEQIGGRV-VVKAQVFVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G  V  V V +     RE+YL
Sbjct: 57  -------GGVKLADTPEQAEQVASQILGMNI-------KGLTVEKVLVAEAITYEREIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS +GG++IEEVA+  P+ I K+   P++G+       L   + L 
Sbjct: 103 GAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMMGLLDFQARDLAYGIGLT 162

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+A+ D D SL EINPL++  +G L+ LDSKI  DD+ L+RH D+
Sbjct: 163 DGRQARQFAQIATALYRAYMDVDASLAEINPLVVRADGSLQALDSKIVLDDSGLFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           + +RD S+E   E  A++  ++YI LDGNIGCMVNGAGLAMATMD++KLYGG PANFLD+
Sbjct: 223 EAMRDSSDEPEAEQRAREAGITYIKLDGNIGCMVNGAGLAMATMDVVKLYGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV  A +II SD +VK ++ NIFGGI R D + KGI++A++EV  ++P++ RL
Sbjct: 283 GGGAGKEKVKTALQIILSDPNVKAVMFNIFGGITRVDEVAKGIIAALEEVNTDVPMIARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G R++AES L  I A  L +AA+K V A +
Sbjct: 343 VGTNEEEGRRILAESAL--IPAATLAEAAEKAVQAAQ 377


>gi|51593317|gb|AAH80781.1| Succinate-Coenzyme A ligase, GDP-forming, beta subunit [Mus
           musculus]
          Length = 433

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 99  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + +     
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENPGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLED 421


>gi|256820557|ref|YP_003141836.1| succinyl-CoA synthetase subunit beta [Capnocytophaga ochracea DSM
           7271]
 gi|256582140|gb|ACU93275.1| succinyl-CoA synthetase, beta subunit [Capnocytophaga ochracea DSM
           7271]
          Length = 397

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/402 (41%), Positives = 244/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V      +V AA+   +      YVVK+Q+HAGG   
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAHTPTEAVEAAKQLTEATNTQWYVVKAQVHAGG--- 57

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GG+++   L  V     +I+G  L+T QT P+G +V+ V + +     G
Sbjct: 58  -------RGKGGGIKLAKGLDQVEPIASQIIGMQLVTPQTPPSGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEFYMSVLLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPAVGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L + G+A+ +       LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 QIAFNLGVTGEAQKEMVKFVTALYNAYVSSDASLFEINPVLKTSDNKIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD  EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDTREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKV 392


>gi|188038847|gb|ACD47037.1| ASL1/Suclg2 fusion protein [Mus musculus]
          Length = 414

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 20  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 80  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + +     
Sbjct: 137 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENPGFL 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 197 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 257 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 317 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 377 GTNVQEAQNILKSSGLPITSAVDLED 402


>gi|219117017|ref|XP_002179303.1| beta chain succinyl-coa synthetase synthetase [Phaeodactylum
           tricornutum CCAP 1055/1]
 gi|217409194|gb|EEC49126.1| beta chain succinyl-coa synthetase synthetase [Phaeodactylum
           tricornutum CCAP 1055/1]
          Length = 443

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 175/402 (43%), Positives = 245/402 (60%), Gaps = 16/402 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI------KTLPGPLYVVKSQIHAGGR 54
           +N+HEY +  +++ + +   +  V S+   AE+           P    V+K+Q+ +GGR
Sbjct: 25  LNVHEYISMEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGAPKKDIVIKAQVLSGGR 84

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           G G FK      KGGV + +           +LG+ L+TKQ  P G   N V + +   +
Sbjct: 85  GLGTFKN---GFKGGVHMVTKPGQAREFAAAMLGNELVTKQA-PNGIVCNKVLLMERMYM 140

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            RE+YLS+L+DR S     +AS +GG  IE+VA   P+ IF   ID   G+T E    + 
Sbjct: 141 RREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMA 200

Query: 175 DMLELQGQARIDGGD----LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             L L+  +   G D    L  NLY  F   D + +E+NPL     G + V D+K++FDD
Sbjct: 201 SNLGLEEGS--TGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDD 258

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA +R   I   RD S+ED RE++A +++L+YI L+G IGCMVNGAGLAM+TMDII+L G
Sbjct: 259 NAEFRQSSIFARRDTSQEDVREVDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKG 318

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G+PANFLDVGGGA++ +V  AF+I+ SDS VK IL+NIFGGIMRCDV+  GI++A KE+ 
Sbjct: 319 GSPANFLDVGGGANETQVQKAFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIG 378

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           IN P+V+RL+G NV+    LI   G  +I A DL+DAA+K V
Sbjct: 379 INKPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAAEKAV 420


>gi|29840541|ref|NP_829647.1| succinyl-CoA synthetase subunit beta [Chlamydophila caviae GPIC]
 gi|33301612|sp|Q822A1|SUCC_CHLCV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29834890|gb|AAP05525.1| succinyl-CoA synthetase, beta subunit [Chlamydophila caviae GPIC]
          Length = 388

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/389 (41%), Positives = 239/389 (61%), Gaps = 10/389 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y++ +    V SSV   + A+K L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLVSYDIAIPPYRVASSVEEGQQALKELAIDAGVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   +++ + ++L    ++ QT      V  V +    +I  E YL
Sbjct: 57  ------NGGVVVAKSPSDILAAVDKLLRMRFVSNQTSGEALPVEKVLITPLVNIAAEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +   A + S  GG+DIEEVA+ YP ++  + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQIRQIIKFMNWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  R  G  L   L + F D D SLLEINPL++ + G L VLD+KI+ DDNALYRH  ++
Sbjct: 171 GDIRKQGAQLIKKLVQCFYDNDASLLEINPLVLTQEGDLLVLDAKITIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIALDGNIGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + +V  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQVQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD+G  ++  SG+       L++AAQ
Sbjct: 351 GTNVDLGKDIVQRSGIPCQFTDSLNEAAQ 379


>gi|109036827|ref|XP_001089976.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Macaca mulatta]
          Length = 432

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    ++++ SGL + +A+DL+D
Sbjct: 395 GTNVQEAQKILSNSGLPITSAVDLED 420


>gi|195572423|ref|XP_002104195.1| GD18581 [Drosophila simulans]
 gi|194200122|gb|EDX13698.1| GD18581 [Drosophila simulans]
          Length = 507

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 218/350 (62%), Gaps = 3/350 (0%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K+Q+ AGGRGKG FK      KGGVRV    ++      +++   L+TKQTG  G   
Sbjct: 86  VLKAQVLAGGRGKGTFKN---GLKGGVRVVYDPQTAEELSGKMIDQLLVTKQTGAAGRIC 142

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             V V +     RE Y +++++R       IAS +GG+DIEEVA   P  I    ID   
Sbjct: 143 KKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGT 202

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+TSE    +   + L G        +  NLY  F  KD  L+EINP           LD
Sbjct: 203 GLTSEQAEKIVKKVGLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALD 262

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +K+ FDDNA +R  ++  LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATM
Sbjct: 263 AKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATM 322

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DIIKLYGG PANFLDVGGGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+
Sbjct: 323 DIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGII 382

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           SA K++ +N+P+V+RL+G  V     LI  SGL ++   DLD AA   VH
Sbjct: 383 SATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVH 432


>gi|6321683|ref|NP_011760.1| Lsc2p [Saccharomyces cerevisiae S288c]
 gi|1711580|sp|P53312|SUCB_YEAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|1323442|emb|CAA97273.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|151943518|gb|EDN61829.1| ligase of succinyl-coa [Saccharomyces cerevisiae YJM789]
 gi|256272655|gb|EEU07632.1| Lsc2p [Saccharomyces cerevisiae JAY291]
 gi|285812435|tpg|DAA08335.1| TPA: Lsc2p [Saccharomyces cerevisiae S288c]
 gi|323354891|gb|EGA86724.1| Lsc2p [Saccharomyces cerevisiae VL3]
          Length = 427

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 241/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V 
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVE 423


>gi|326914161|ref|XP_003203396.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Meleagris gallopavo]
          Length = 463

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 166/392 (42%), Positives = 243/392 (61%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V  +   A    K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMGLLQEAGISVPHGLVARTPDEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAKDISSKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQALRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNLVDEAAENMIKLYYLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DMQDWTQEDERDRDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ + IP+V+RL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDLKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  VD    LI  SGL ++   DLD+AA+ +V
Sbjct: 410 GTRVDDAKALITASGLKILACDDLDEAAKMVV 441


>gi|259146745|emb|CAY80002.1| Lsc2p [Saccharomyces cerevisiae EC1118]
          Length = 427

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 162/395 (41%), Positives = 241/395 (61%), Gaps = 6/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAHLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422


>gi|332261159|ref|XP_003279643.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial isoform 1 [Nomascus leucogenys]
          Length = 432

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|296225621|ref|XP_002758579.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Callithrix jacchus]
          Length = 432

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKKLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +A+DL+D
Sbjct: 395 GTNVHEAQKILNNSGLPITSAVDLED 420


>gi|157779135|ref|NP_003839.2| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           isoform 2 precursor [Homo sapiens]
 gi|52788292|sp|Q96I99|SUCB2_HUMAN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|119585860|gb|EAW65456.1| succinate-CoA ligase, GDP-forming, beta subunit, isoform CRA_a
           [Homo sapiens]
 gi|119585861|gb|EAW65457.1| succinate-CoA ligase, GDP-forming, beta subunit, isoform CRA_a
           [Homo sapiens]
          Length = 432

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|114587760|ref|XP_516570.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial isoform 2 [Pan troglodytes]
          Length = 432

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFI 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|46329889|gb|AAH68602.1| SUCLG2 protein [Homo sapiens]
          Length = 432

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSKAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|3766203|gb|AAC64399.1| GTP-specific succinyl-CoA synthetase beta subunit [Mus musculus]
          Length = 404

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 10  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 70  ---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QG  DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 127 AILMDRSHNGPVLVGSPQGRSDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 187 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 247 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 307 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 366

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 367 GTNVQEAQNILKSSGLPITSAVDLED 392


>gi|170571332|ref|XP_001891688.1| succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial,
           putative [Brugia malayi]
 gi|158603672|gb|EDP39510.1| succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial,
           putative [Brugia malayi]
          Length = 434

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 166/393 (42%), Positives = 249/393 (63%), Gaps = 4/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+Q  +LL++ ++PVA   V  +V    +  + + G   V+K+Q+  GGRGKG F+
Sbjct: 23  LSLKEHQGISLLKQADIPVAPFGVSRNVDELYNEARKIGGKDLVIKAQVLTGGRGKGYFE 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S +        +LGS + TKQTG +G   + V V       RE Y 
Sbjct: 83  ---SGLEGGVQLVFSPEEAREKASMMLGSKIFTKQTGASGKLCDEVMVCKRLFTRREFYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +G    I S++GG++IEEVA   P  I K  I+   G+   + +S+ D +  +
Sbjct: 140 SITMDRHTGGPVAIGSSKGGVNIEEVAAKDPSAIVKCPINIFEGMKDAEASSVADRMGFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              RI   ++F  LY  F   D +L+EINP+    +G+L  LD K++ D NA +R  ++ 
Sbjct: 200 DDLRIQAANIFKKLYNLFIKYDATLIEINPMAEDISGKLYCLDCKLNIDSNASHRQTELF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D  ++D  E+ A + +L+YI LDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 260 AMEDQQQQDPLELRAAKADLNYIRLDGNIGCMVNGAGLAMATMDIIKLHGGDPANFLDVG 319

Query: 301 GGADQDKVAAAFKIITSDS-SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGA  ++VA AF+IIT+D   V  IL+NIFGGIMRCDV+ +G+++AV E+++ +P+V+RL
Sbjct: 320 GGATVEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIAQGMINAVNELQLKVPVVVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +G  V+    LIA + L +I+  DLD AA+ +V
Sbjct: 380 QGTRVEDAKALIAAANLRMISCDDLDQAAKMVV 412


>gi|229047523|ref|ZP_04193113.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
 gi|228723770|gb|EEL75125.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
          Length = 310

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 163/318 (51%), Positives = 207/318 (65%), Gaps = 18/318 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFKI 314
           LDVGGGA  +K+    K+
Sbjct: 287 LDVGGGATAEKLQKHSKL 304


>gi|282908538|ref|ZP_06316368.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282327600|gb|EFB57883.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WW2703/97]
          Length = 287

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 146/281 (51%), Positives = 199/281 (70%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           +  Y+  ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +  
Sbjct: 5   KRYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAF 64

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            + +  ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+R
Sbjct: 65  NINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFR 124

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D+ ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PAN
Sbjct: 125 HKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPAN 184

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GG A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PL
Sbjct: 185 FLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPL 244

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+RLEG NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 245 VVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 285


>gi|323337464|gb|EGA78713.1| Lsc2p [Saccharomyces cerevisiae Vin13]
          Length = 427

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 240/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAXLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G+  A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLXEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V 
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVE 423


>gi|213963666|ref|ZP_03391917.1| succinyl-CoA synthetase beta chain [Capnocytophaga sputigena Capno]
 gi|213953661|gb|EEB64992.1| succinyl-CoA synthetase beta chain [Capnocytophaga sputigena Capno]
          Length = 397

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 167/402 (41%), Positives = 243/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V      +V AA+   +      YVVK+Q+HAGG   
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAQTPTEAVEAAKQLTEATNTQWYVVKAQVHAGG--- 57

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GG+++   L  V     +I+G  L+T QT P+G +V+ V + +     G
Sbjct: 58  -------RGKGGGIKLAKGLDQVEPIASQIIGMQLVTPQTPPSGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEFYMSVLLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPAVGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L + G A+ +       LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 QIAFNLGVTGDAQKEMVKFVTALYNAYVSSDASLFEINPVLKTSDNKIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD  EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDTREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKV 392


>gi|323348487|gb|EGA82732.1| Lsc2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 427

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 240/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G+  A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLXEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V 
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVE 423


>gi|325269208|ref|ZP_08135827.1| succinyl-CoA ligase subunit beta [Prevotella multiformis DSM 16608]
 gi|324988437|gb|EGC20401.1| succinyl-CoA ligase subunit beta [Prevotella multiformis DSM 16608]
          Length = 379

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 175/400 (43%), Positives = 242/400 (60%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIICRTPDEAVAAYKQLGVEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGSSEAEIRQHAEAILGMNI-------KGFIVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDM 176
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP++G+      E    L D 
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVVGMNDYLAREAAFKLFDN 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      +F N+YK F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH
Sbjct: 164 MAQVKQAV----PVFKNIYKLFTEKDASLAEINPLVLLKDGTLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + +EE+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVAELFEPTEEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K ++ +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVANGLLEAFKVIETDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  ++   G +      + DA  K V   K
Sbjct: 340 IRLTGTNEAEGRAIL--EGTHFTVGTSMADAGHKAVELSK 377


>gi|315223654|ref|ZP_07865508.1| succinyl-CoA synthase [Capnocytophaga ochracea F0287]
 gi|314946435|gb|EFS98430.1| succinyl-CoA synthase [Capnocytophaga ochracea F0287]
          Length = 397

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 167/402 (41%), Positives = 243/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V      +V AA+   +      YVVK+Q+HAGG   
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAHTPTEAVEAAKQLTEATNTQWYVVKAQVHAGG--- 57

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GG+++   L  V     +I+G  L+T QT P+G +V+ V + +     G
Sbjct: 58  -------RGKGGGIKLAKGLDQVEPIASQIIGMQLVTPQTPPSGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEFYMSVLLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPAVGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L + G A+ +       LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 QIAFNLGVTGDAQKEMVKFVTALYNAYVSSDASLFEINPVLKTSDNKIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD  EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDTREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKV 392


>gi|17567829|ref|NP_509821.1| hypothetical protein F47B10.1 [Caenorhabditis elegans]
 gi|1710875|sp|P53588|SUCB1_CAEEL RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit
           beta, mitochondrial; AltName: Full=ATP-specific
           succinyl-CoA synthetase subunit beta; AltName:
           Full=Succinyl-CoA synthetase beta-A chain;
           Short=SCS-betaA; Flags: Precursor
 gi|3877283|emb|CAA91981.1| C. elegans protein F47B10.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 435

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 170/391 (43%), Positives = 234/391 (59%), Gaps = 4/391 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    +L+ Y + V    V      A S  K + G  YVVK+Q+ AGGRGKGRF   
Sbjct: 26  LHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRIGGKDYVVKAQVLAGGRGKGRFS-- 83

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +  +GGV++  +   V      ++G+ LITKQT   G +   V V       RE Y S+
Sbjct: 84  -SGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEEVMVCKRLFTRREYYFSI 142

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +DR +     IAS+QGG++IEEVA   P  I K+ ID  +G+T E    +   +     
Sbjct: 143 TLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKD 202

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
                 ++   LY+ F   D +L+EINP+    NG +  +D K+  D NA +R   + +L
Sbjct: 203 CEQQASEIIEKLYQMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFRQAKLFDL 262

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D  +ED  EI A   NL+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGGG
Sbjct: 263 KDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGG 322

Query: 303 ADQDKVAAAFKIITSDS-SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           A  ++V  AFKIIT+D   V  IL+NIFGGIMRCDV+ +GI+ A +E+ + IP+V+RL+G
Sbjct: 323 ATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIPIVVRLQG 382

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
             V+    LIA S L ++   +LD+AA+ +V
Sbjct: 383 TKVEDAKALIATSQLRILPCDNLDEAAKMVV 413


>gi|77736229|ref|NP_001029811.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           precursor [Bos taurus]
 gi|91208175|sp|Q3MHX5|SUCB2_BOVIN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|75773452|gb|AAI04560.1| Succinate-CoA ligase, GDP-forming, beta subunit [Bos taurus]
 gi|296474979|gb|DAA17094.1| succinate-CoA ligase, GDP-forming beta subunit precursor [Bos
           taurus]
          Length = 432

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +V  V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     +++ SGL + +A+DL+D
Sbjct: 395 GTNVHEAQNILSNSGLPITSAVDLED 420


>gi|86142672|ref|ZP_01061111.1| Succinyl-CoA synthetase, beta subunit [Leeuwenhoekiella blandensis
           MED217]
 gi|85830704|gb|EAQ49162.1| Succinyl-CoA synthetase, beta subunit [Leeuwenhoekiella blandensis
           MED217]
          Length = 396

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 174/401 (43%), Positives = 242/401 (60%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G V ++   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRIQRGKVATTAAEAVEAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     EI+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEQIAGEIIGMNLVTPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGKNMIMYSTEGGMDIEEVAEKTPHLIFTEEIDPATGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+ + D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 RIAFNLGLSGTAFKEMTKFVAALYKAYSESDSSLFEINPVLKTSDDKIMAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RD  EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHKDYAAMRDKREENPVEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD ++V  AF +I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVETAFNLILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI   LI  SGL+V +AI   +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKELIDNSGLDVQSAIQFKEAADKV 391


>gi|126661846|ref|ZP_01732845.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteria bacterium BAL38]
 gi|126625225|gb|EAZ95914.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteria bacterium BAL38]
          Length = 397

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 169/406 (41%), Positives = 242/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  Y V V +G+V    + +V AA+          YVVK+Q+HA     
Sbjct: 1   MNIHEYQGKEILASYGVRVQRGIVANNPVEAVAAAKQLTTETGTSWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V     +I+G  LIT QT P G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLDQVTEISEQIIGMQLITPQTPPEGKKVHKVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP  G+ +    
Sbjct: 111 ETETSEFYVSVLLNRATGRNMIMYSTEGGMDIEEVAEHTPHLIFTEEIDPAYGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A  +       LYKA+   D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGEAFKEMVKFIDALYKAYIGSDSSMFEINPVLKTSDNKILAVDAKVNIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+R     E+RDV EE+  E+EAK+  L+Y+ LDG +GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALFRQAKYAEMRDVREENPIEVEAKEVGLNYVDLDGTVGCMVNGAGLAMATMDLIKYAGF 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVETAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N  I   LI  SG+ +++A+   +AA ++  A+
Sbjct: 351 AIKVPIIVRLQGTNAVIAKELIDNSGMPILSAVQFQEAADQVKAAL 396


>gi|225010652|ref|ZP_03701122.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-3C]
 gi|225005205|gb|EEG43157.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-3C]
          Length = 398

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 168/402 (41%), Positives = 242/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGMVAQNPEEAVAAAKQLTEETGTSWFVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S    I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLEEVASISDAIIGMDLVTPQTSAAGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L+DR SG    + ST+GGMDIEEVA+  P  IF   I P +G+      
Sbjct: 111 ESETSEFYMSVLLDRASGRNMIMYSTEGGMDIEEVAEHTPHLIFTETISPAVGIMPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGNAFKEMTKFVMSLYKAYEESDASLFEINPVLKTSDDKILAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     ++RD+ EE++ E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALYRRKVYADMRDLREENAIEVEANAVGLNYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   ++  SGL V +A+   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVKSAVQFQEAADKV 392


>gi|323304746|gb|EGA58506.1| Lsc2p [Saccharomyces cerevisiae FostersB]
          Length = 427

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 240/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+ G  +I +SG+ +    +LD AA+K+V 
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYLFDELDPAAKKVVE 423


>gi|323333394|gb|EGA74790.1| Lsc2p [Saccharomyces cerevisiae AWRI796]
          Length = 427

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 161/396 (40%), Positives = 241/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +++++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARQLEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V 
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVE 423


>gi|121727360|ref|ZP_01680499.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V52]
 gi|121630252|gb|EAX62650.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V52]
          Length = 292

 Score =  301 bits (772), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 151/290 (52%), Positives = 214/290 (73%)

Query: 108 VEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           VE+ ++I  ELYL  +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +
Sbjct: 2   VEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQA 61

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
                L   L LQG        +F  L + F   D++LLEINPL+I   G L  LD KI+
Sbjct: 62  YQGRELAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKIN 121

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
            D NA+YR   ++++ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ 
Sbjct: 122 IDSNAMYRQPKLRQMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVN 181

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
           L+GG PANFLDVGGGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVK
Sbjct: 182 LHGGKPANFLDVGGGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVK 241

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EV +++P+V+RLEG N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 242 EVGVSVPVVVRLEGTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 291


>gi|57524960|ref|NP_001006141.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           [Gallus gallus]
 gi|53130454|emb|CAG31556.1| hypothetical protein RCJMB04_7p8 [Gallus gallus]
          Length = 432

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 229/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  S   A  A + L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMADHGVTVQRFFVADSADDALEAAQRLKAKEIVLKAQILAGGRGKGTFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K+V    ++++G  L TKQT   G +V  V V +  +I RE Y 
Sbjct: 98  ---SGLKGGVHLTKDPKTVAQLAKQMIGYNLSTKQTPKDGVKVKKVMVAEALNISRETYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGG+DIEEVA   P+ IFK  ID   GV       +   L  +
Sbjct: 155 AILMDRACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGVQDHQALQMAKNLGFK 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 215 GPLQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++ ESGL + +A DL+D
Sbjct: 395 GTNVHEAQRILNESGLPITSASDLED 420


>gi|301057860|ref|ZP_07198928.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
 gi|300448056|gb|EFK11753.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
          Length = 392

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 174/402 (43%), Positives = 244/402 (60%), Gaps = 19/402 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK  L  Y V V +G +  +   A    K L G + V+K+QIHAG RGK    
Sbjct: 1   MRIHEYQAKKFLADYGVSVPRGAMAKTAAEAAGIAKELGGRV-VIKAQIHAGARGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   S      +   +LGS L T QTG  G  VN V VE+  + ++ELYL
Sbjct: 57  -------GGIKTVDSPDEAERETSSLLGSRLKTHQTGEEGLIVNSVLVEEALNSIKELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP----LIGVTSEDVASLCDM 176
            + +D  +G    +AS  GGM+IE++A+  P+KI K  +DP    L G  + ++      
Sbjct: 110 GIAIDSATGAPLLMASEAGGMEIEQIAEKTPEKIVKCHVDPGTLQLRGFQAREIGF---G 166

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L+L  + R    D+ P L   F +KD SL EINPL +  +GR+  +D+K++FDD+ALYRH
Sbjct: 167 LKLGDKERAAVIDIVPRLCSLFVEKDCSLAEINPLSVTADGRVLAVDAKLNFDDSALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNL-SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            DI+EL D  +E+  E+ AK+  + SY+ L+G+IG MVNGAGLAMA MD IK  GG PAN
Sbjct: 227 ADIKELYDPHQENELEMMAKKKGIASYVKLEGDIGSMVNGAGLAMAVMDAIKHIGGKPAN 286

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD+G   + ++V  AFKII SD  VK IL+NIFGG+ R DV+ +G++ A  ++ I +P+
Sbjct: 287 FLDLGTVNNPERVLNAFKIIASDPGVKCILVNIFGGMARVDVITRGLVEAYSQIDIKVPV 346

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           V RL+G N   G R+++ESG+N+I A    +A +K V A  G
Sbjct: 347 VARLKGTNAAEGERILSESGINLIKADAFHEAIEKAVTAASG 388


>gi|326928102|ref|XP_003210222.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like, partial [Meleagris gallopavo]
          Length = 460

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 164/386 (42%), Positives = 229/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  S   A  A + L     V+K+QI AGGRGKG F 
Sbjct: 66  LNLQEYQSKKLMADHGVTVQRFFVADSADDALEAAQRLKAKEIVLKAQILAGGRGKGTFN 125

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K+V    ++++G  L TKQT   G +V  V V +  +I RE Y 
Sbjct: 126 ---SGLKGGVHLTKDPKTVEQLAKQMIGYNLSTKQTPKDGVKVKKVMVAEALNISRETYF 182

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGG+DIEEVA   P+ IFK  ID   G+       +   L  +
Sbjct: 183 AILMDRACNGPVMVGSPQGGVDIEEVAATSPELIFKEEIDIFEGIQDHQALQMAKNLGFK 242

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 243 GPLQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 302

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 303 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 362

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 363 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 422

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++ ESGL + +A DL+D
Sbjct: 423 GTNVHEAQRILNESGLPITSASDLED 448


>gi|146231894|gb|ABQ13022.1| similar to Succinyl-CoA ligase [GDP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, betaG
           chain) (SCS-betaG) (GTP-specific succinyl-CoA synthetase
           beta subunit) [Bos taurus]
          Length = 432

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTASEALEAAKRLNAKEIVLKAQILAGGRGKGVFS 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +V  V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     +++ SGL + +A+DL+D
Sbjct: 395 GTNVHEAQNILSNSGLPITSAVDLED 420


>gi|305664827|ref|YP_003861114.1| succinyl-CoA synthetase subunit beta [Maribacter sp. HTCC2170]
 gi|88707949|gb|EAR00188.1| Succinyl-CoA synthetase, beta subunit [Maribacter sp. HTCC2170]
          Length = 397

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 167/402 (41%), Positives = 240/402 (59%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  S   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHSPKEAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V      I+G  LIT QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEEVAGNIIGMNLITPQTSAEGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L+DR  G    + ST+GGMDIEEVA+  P  IF   +DP  G+      
Sbjct: 111 DSETSEFYMSVLLDRGKGRNMIMYSTEGGMDIEEVAEKTPHLIFTEEVDPSTGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D ++ EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGMAFKEMTKFVASLYKAYVESDSNMFEINPVLKTSDDKIMAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     E+RD+ EE+  E+EA+   LSY+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALYRRKQYAEMRDLREENPIEVEARAVGLSYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D++VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDANVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   +I  SGL V +A+   +AA K+
Sbjct: 351 AITVPIIVRLQGTNAELAKEIIDNSGLAVHSAVQFQEAADKV 392


>gi|327289467|ref|XP_003229446.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 450

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 161/392 (41%), Positives = 240/392 (61%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V  GVV  +   A  A + +     VVK+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYLSMRLLKEAGVSVPNGVVARTPGEAFKAAQNIGSNELVVKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V + +     +E Y 
Sbjct: 96  ---GGLKGGVKIVYSPEEAKEMASQMIGKKLFTKQTGERGRICNEVLICERRYPKKEYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S QGG++IE+VA + P+ I K  +D + G+ +E    L   +   
Sbjct: 153 AIALERAFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPVDIVEGIQTEQALRLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D       LY+ F   D  ++EINP++    G++  +D+KI+ D N+ +R   + 
Sbjct: 213 ADVAEDAAHNMVKLYQFFIKYDALMVEINPMVEDSTGKVICIDAKINLDSNSAFRQKSVF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA    L+Y+ LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWSQEDERDREAANAQLNYVPLDGDIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+ITSD+ V+ +L+NIFGGIMRCD++ +GI+ A  E+ + +P+V+RL+
Sbjct: 333 GGASPEQVKEAFKLITSDTRVQSVLVNIFGGIMRCDIIAQGIIMAASELDLKVPIVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  ++    LIA+SGL ++   DLD AAQ  V
Sbjct: 393 GTQMESAKALIAKSGLKILPCDDLDQAAQMAV 424


>gi|224066459|ref|XP_002188599.1| PREDICTED: succinate-CoA ligase, GDP-forming, beta subunit
           [Taeniopygia guttata]
          Length = 518

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K ++  + V V +  V  S + A  A + L     V+K+QI AGGRGKG F 
Sbjct: 124 LNLQEYQSKKIMADHGVTVQRFFVADSANDALEAAQRLKAKEIVLKAQILAGGRGKGIFN 183

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K+V    ++++G  L TKQT   G  V  V V +  DI RE Y 
Sbjct: 184 ---SGLKGGVHLTKDPKTVEQLAKQMIGYNLSTKQTSKDGVTVKKVMVAEALDISRETYF 240

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGG+DIEEVA   P+ IFK  ID   G+       +   L  Q
Sbjct: 241 AILMDRACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGIKDHQALQMAKNLGFQ 300

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 301 GPLQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 360

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 361 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 420

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 421 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLE 480

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R+++ESGL + +A DL+D
Sbjct: 481 GTNVHEAQRILSESGLPITSANDLED 506


>gi|237718598|ref|ZP_04549079.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_2_4]
 gi|229452058|gb|EEO57849.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_2_4]
          Length = 376

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 159/371 (42%), Positives = 220/371 (59%), Gaps = 17/371 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V  + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDVYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFALFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH +I 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVETDAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLI 371
           G N  IG  L+
Sbjct: 344 GTNEHIGRELL 354


>gi|15618881|ref|NP_225167.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           CWL029]
 gi|15836505|ref|NP_301029.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           J138]
 gi|16752058|ref|NP_445424.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           AR39]
 gi|33242340|ref|NP_877281.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           TW-183]
 gi|21264064|sp|Q9Z6T6|SUCC_CHLPN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|4377299|gb|AAD19110.1| Succinyl-CoA Synthetase, Beta [Chlamydophila pneumoniae CWL029]
 gi|7189799|gb|AAF38674.1| succinyl-CoA synthetase, beta subunit [Chlamydophila pneumoniae
           AR39]
 gi|8979346|dbj|BAA99180.1| succinyl-CoA synthetase, beta [Chlamydophila pneumoniae J138]
 gi|33236851|gb|AAP98938.1| succinate-CoA ligase beta chain [Chlamydophila pneumoniae TW-183]
          Length = 386

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 166/392 (42%), Positives = 234/392 (59%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y+VP+    V+SS    E  I        VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLASYDVPIPPYWVVSSEEEGELLITKSGLDSAVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   ++  + ++LG    + QT      V  V +     I RE Y+
Sbjct: 57  ------HGGVIVAKSSAGILQAVAKLLGMHFTSNQTADGFLPVEKVLISPLVAIQREYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMDIEEVA   P++I  L +     + S  +      +E +
Sbjct: 111 AVIMDRKHRCPVLMLSKAGGMDIEEVAHSSPEQILTLPLTSYGHIYSYQLRQATKFMEWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+    G  L   L K F + D+SLLEINPL++   G L VLDSKI+ DDNALYRH +++
Sbjct: 171 GEVMHQGVQLIKKLAKCFYENDVSLLEINPLVLTLEGELLVLDSKITIDDNALYRHPNLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIAL GNIGC+VNGAGLAM+T+DI+KL+GG  ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALSGNIGCIVNGAGLAMSTLDILKLHGGNAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q ++  A  ++ SD SVK + INIFGGIM C V+  G+++ ++     +P V+RLE
Sbjct: 291 GGASQKQIQEAVSLVLSDESVKVLFINIFGGIMDCSVVASGLVAVMETRDQVVPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV++G  ++ +SG+       +++ A++ V
Sbjct: 351 GTNVELGKEIVQQSGIPCQFVSSMEEGARRAV 382


>gi|328724202|ref|XP_001942971.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 488

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/390 (43%), Positives = 248/390 (63%), Gaps = 5/390 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL+   +PV K  V  +   A   +++L      VK+Q+ AGGRG G FK
Sbjct: 78  LNVHEHVSYSLLKGAGIPVPKFGVAKTGKEAAEIVRSLGLTDIAVKAQVLAGGRGLGHFK 137

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV++  + +   +   ++LG  LITKQTG  G   N V V +     +E Y 
Sbjct: 138 K---GFKGGVKMVDTAEEAENVSDQMLGDYLITKQTGEKGRICNAVMVAERVYARKEFYF 194

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IE+VA+D P+ I  + ID   G++ E    +   + L 
Sbjct: 195 AVMMERAFGGPVLIASSQGGVNIEKVAEDNPEAILYMPIDITKGISRELALDVITKVGLT 254

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLI-IMKNGRLRVLDSKISFDDNALYRHLDI 239
            + + +  D+   LY  F  KD  L+E+NP    +  G    LD+K  FDDNA YR  ++
Sbjct: 255 -KKKDETADVILKLYDLFLTKDALLIEVNPYAESISTGGYYCLDAKFRFDDNAEYRQKEL 313

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD ++ED +E+EA + NL+YIALDG IGC+VNGAGLAMATMDII L+GG PANFLDV
Sbjct: 314 FDLRDWTQEDEKEVEASKFNLNYIALDGTIGCLVNGAGLAMATMDIINLHGGFPANFLDV 373

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +V  AFKIITSD  V  I++NIFGGIMRCD++  GI++A +E+ +N+P++ RL
Sbjct: 374 GGGATASQVKEAFKIITSDPKVCAIMVNIFGGIMRCDIIADGIIAAAQELNLNVPIICRL 433

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           +G NVD     IA SG+ ++   +LD+AA+
Sbjct: 434 QGTNVDEAKLRIANSGMKILPVDNLDEAAR 463


>gi|163757177|ref|ZP_02164278.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Kordia algicida OT-1]
 gi|161322853|gb|EDP94201.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Kordia algicida OT-1]
          Length = 397

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/402 (41%), Positives = 242/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G V S+   A    K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRVQRGKVASTPAEAVEVAKQLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QT   G RV+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEDIAGQIIGMDLVTPQTSAEGKRVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   +DP  G+      
Sbjct: 111 DSEPNEFYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPHLIFTEEVDPAQGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+   D SL EINP++   + ++  +D+K++ D+N
Sbjct: 171 KVAFNLGLSGTAFKEMTRFVSSLYKAYVASDSSLFEINPVLKTSDDKIMAVDAKVTLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD+ EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALFRHKDYAAMRDLREENPIEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDENVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N DI   LI  SGL V +A++  +AA K+
Sbjct: 351 AIKVPIIVRLQGTNADIAKELIDNSGLAVESAVEFQEAADKV 392


>gi|269302763|gb|ACZ32863.1| succinyl-CoA synthetase, beta subunit [Chlamydophila pneumoniae
           LPCoLN]
          Length = 386

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/392 (42%), Positives = 235/392 (59%), Gaps = 10/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y+VP+    V+SS    E  I        VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLASYDVPIPPYWVVSSEEEGELLITKSGLDSAVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   ++  + ++LG    + QT      V  V +     I RE Y+
Sbjct: 57  ------HGGVIVAKSSAGILQAVAKLLGMHFTSNQTADGFLPVEKVLISPLVAIQREYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMD+EEVA+  P++I  L +     + S  +      +E +
Sbjct: 111 AVIMDRKHRCPVLMLSKAGGMDVEEVAQSSPEQILTLPLTSYGHIYSYQLRQATKFMEWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+    G  L   L K F + D+SLLEINPL++   G L VLDSKI+ DDNALYRH +++
Sbjct: 171 GEVMHQGVQLIKKLAKCFYENDVSLLEINPLVLTLEGELLVLDSKITIDDNALYRHPNLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIAL GNIGC+VNGAGLAM+T+DI+KL+GG  ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALSGNIGCIVNGAGLAMSTLDILKLHGGNAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q ++  A  ++ SD SVK + INIFGGIM C V+  G+++ ++     +P V+RLE
Sbjct: 291 GGASQKQIQEAVSLVLSDESVKVLFINIFGGIMDCSVVASGLVAVMETRDQVVPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV++G  ++ +SG+       +++ A++ V
Sbjct: 351 GTNVELGKEIVQQSGIPCQFVSSMEEGARRAV 382


>gi|145508425|ref|XP_001440162.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407368|emb|CAK72765.1| unnamed protein product [Paramecium tetraurelia]
          Length = 429

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 161/400 (40%), Positives = 245/400 (61%), Gaps = 10/400 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--------PGPLYVVKSQIHAG 52
           +++HEYQ     + + +P+  G +  +   A  A   +             VVK+Q+H G
Sbjct: 12  LSLHEYQTAEFFKSFQLPIPPGRICKTADEAYKAAARIIQEGSDKNSFTDVVVKAQVHTG 71

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE   +S  G+ + S+ + V     ++LG+TLITKQTG  G +   VYV +  
Sbjct: 72  GRGKGYFKENGFNS--GIHIASTPEDVREYASKMLGNTLITKQTGSLGKKCEMVYVVERN 129

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            + +ELYLS+L+DR +G +  +AS +GG+ IEE   +Y +K    + + +  + S    S
Sbjct: 130 FLRKELYLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPNAVEEIDSSIYES 189

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  + +L    +    ++  +++  F   D +LLEINPL I   G L + D K++ DDN+
Sbjct: 190 VSKVYKLNPIQQKQMTEILKHMFDIFLQTDATLLEINPLGIDLQGNLIICDQKLNIDDNS 249

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R   I  + DV ++D +E+EA++H L+YIALDGNIGCMVNGAGLAMATMD+IK Y G+
Sbjct: 250 QFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVNGAGLAMATMDLIKQYEGS 309

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGG A   ++ +A KI+  D +V+ IL+NIF GI RCD +V G+L  +  + + 
Sbjct: 310 PANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIARCDQIVLGLLKGLTVLGMK 369

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            P+V+R++G  V+   +LI ESG N++   DLD+AA+K V
Sbjct: 370 KPMVLRMKGTKVEEAKKLIEESGFNMMFTEDLDEAAKKAV 409


>gi|190406750|gb|EDV10017.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Saccharomyces cerevisiae RM11-1a]
          Length = 427

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 161/395 (40%), Positives = 240/395 (60%), Gaps = 6/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+    LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMPHHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422


>gi|323308919|gb|EGA62151.1| Lsc2p [Saccharomyces cerevisiae FostersO]
          Length = 427

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 161/396 (40%), Positives = 240/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IE+VA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEKVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN---GRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL+G  V+ G  +I +SG+ +    +LD AA+K+V 
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYLFDELDPAAKKVVE 423


>gi|71003698|ref|XP_756515.1| hypothetical protein UM00368.1 [Ustilago maydis 521]
 gi|46095953|gb|EAK81186.1| hypothetical protein UM00368.1 [Ustilago maydis 521]
          Length = 460

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 164/399 (41%), Positives = 240/399 (60%), Gaps = 8/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  +L KY +   K +   +   A  A ++  G   V+K+Q+ AGGRGKG F 
Sbjct: 63  LSIHEHLSMDILNKYGIATPKYIAAKTPEEAYKAAQSFGGKEIVIKAQVLAGGRGKGHF- 121

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV +  + +       +++G+ LITKQTG  G   N V + +      E 
Sbjct: 122 ----DSGLKGGVHLIKTPEEARDLAAKMIGNHLITKQTGAGGRLCNAVMIAEARPPHHEY 177

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++L DR + +   IAS QGGM IEEVA + P  I    ID   G++++D   +   L 
Sbjct: 178 YVAVLNDRATQLPVLIASNQGGMSIEEVAAENPDAIITTPIDFEKGLSNQDALGIAKKLG 237

Query: 179 LQG-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             G +      + F  LYK F +KD + +EINPL   K+G +  +D+K+ FD+NA +R  
Sbjct: 238 FTGAKQEQQAAETFQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQA 297

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DI ELRD ++ED  E++A ++ L++I LDGNIGC+VNGAGLAMATMD++KL GG PANFL
Sbjct: 298 DIFELRDTTQEDPDEVDAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFL 357

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG A    V  AF+++ +   VKGI +NIFGGI+ C  + +GI+ A +E+ ++IPLV+
Sbjct: 358 DVGGTASAASVKKAFELLLNSKEVKGIFVNIFGGIVSCKKIAEGIIQATQELDMSIPLVV 417

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G +      LI  S L +     LD+AA K V + +
Sbjct: 418 RLQGTHEKEAKELIKNSNLKIFAFDGLDEAAAKAVESAQ 456


>gi|88802763|ref|ZP_01118290.1| Succinyl-CoA synthetase, beta subunit [Polaribacter irgensii 23-P]
 gi|88781621|gb|EAR12799.1| Succinyl-CoA synthetase, beta subunit [Polaribacter irgensii 23-P]
          Length = 398

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 168/402 (41%), Positives = 240/402 (59%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V S+   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRIQRGIVASNHKEAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-ED----G 111
                      GGV++  +L+ V S   +I+G  L+T QT   G  VN V V ED    G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVESIANDIIGMMLVTPQTSAEGKLVNQVLVCEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R SG    + ST+GGMDIE VA++ P  IF   +DPL+G+      
Sbjct: 111 DSEPEEYYMSVLLNRASGKNMIMYSTEGGMDIETVAEETPHLIFTEEVDPLLGLMPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D ++ EINP++   + ++  +D+K+S D+N
Sbjct: 171 KIAFNLGLSGTAFKEMTKFVTALYTAYIKSDSAMFEINPVLKTSDDKIMAVDAKVSLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RD+ EE+  E+EAK   L+Y+ LDGN+GCMVNGAGLAM TMD+IK  GG
Sbjct: 231 ALYRHRDYAAMRDLREENPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMGTMDLIKESGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF II  D +VK IL+NIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAQRVEIAFGIILKDKNVKAILVNIFGGIVRCDRVAQGVVDAYKSMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +IN+P++ RL+G N      LI  SG+ +I+A +  +A+ K+
Sbjct: 351 RINVPIICRLQGTNAKEAKELIDNSGMKIISATEFQEASDKV 392


>gi|118369102|ref|XP_001017756.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila]
 gi|89299523|gb|EAR97511.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 444

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 247/400 (61%), Gaps = 15/400 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVIS----SVHAAESAIKTLPG------PLYVVKSQIHAG 52
           +HEYQ   L ++Y +P+ +    +    ++  AE   +  P         +VVK+Q+HAG
Sbjct: 30  LHEYQVHNLFKEYKLPLLQAYRATHPEDAIKLAEQLERQKPRNNASQFTDFVVKAQVHAG 89

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE  +  +GGV+   S + V     +++G TLITKQTG  G  V+ V + +  
Sbjct: 90  GRGKGYFKE--SSLQGGVQFAHSPEEVGKIAEKMIGKTLITKQTGSRGRNVSSVMITERI 147

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            + +E+Y S+ +DRT G +  I + +GG++IEE     P+ I    ++P I + +E +  
Sbjct: 148 FLRKEMYFSITLDRTRGGLCIICNEKGGVNIEE---GDPKHIKTFFLEPGIEIPNETLNE 204

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +     L         ++  +LYK F D D +LLEINPL +  + ++++ D K++ DDN+
Sbjct: 205 IIAAYNLGSAFDQQLKNIVTSLYKCFIDNDATLLEINPLGLTIDNQIKLCDQKMNIDDNS 264

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            YR   + ++ D++++D +EIEA+++ L+YIALDGNIGCMVNGAGLAMATMDIIK   G 
Sbjct: 265 SYRQPRLSQMEDITQKDWKEIEAQRYGLNYIALDGNIGCMVNGAGLAMATMDIIKQKNGM 324

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLD GG AD  +V  A KI+ +D +V+ IL+NIF GI +CD++  G++  +  + + 
Sbjct: 325 PANFLDCGGKADDTQVVEALKIMDNDPNVEAILVNIFAGITKCDIICLGLIKGMSLLGMK 384

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            P+++RL+G NV+    +I  SG N+I   DLD+AA+K V
Sbjct: 385 KPIILRLKGNNVEAAKEIIQNSGFNLIFTEDLDEAAEKAV 424


>gi|327266166|ref|XP_003217877.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 424

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 228/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 30  LNLQEYQSKKLMADHGVTVQRFFVADTANDALEAAKRLKATEIVLKAQILAGGRGKGVFS 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V     +++G  LITKQT   G +V  V V +  +I RE Y 
Sbjct: 90  ---SGLKGGVHLMKDPKEVGKLAEQMIGYNLITKQTPKDGVKVKKVMVAEALNISRETYF 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S  GG+DIEEVA   P+ IFK  ID   GV       L + L  +
Sbjct: 147 AILMDRACNGPVLVGSPAGGVDIEEVAATSPELIFKEEIDIFEGVKDTQALRLAENLGFK 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 207 GPLKQQAADQIKKLYSLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA  ++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 267 AMDDKSENEPIENEAALYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 326

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 327 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 386

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++ ESGL + +A DL+D
Sbjct: 387 GTNVHEAQRILNESGLPITSASDLED 412


>gi|302345488|ref|YP_003813841.1| succinate-CoA ligase, beta subunit [Prevotella melaninogenica ATCC
           25845]
 gi|302149461|gb|ADK95723.1| succinate-CoA ligase, beta subunit [Prevotella melaninogenica ATCC
           25845]
          Length = 379

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 241/400 (60%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIICRTPDEAVEAYKQLGIEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGCNETEIRQHAEAILGMNI-------KGFIVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDM 176
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP+IG++     E    L D 
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVIGMSDYLAREAAFKLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      +F N+YK F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH
Sbjct: 164 MAQVKQAV----PIFKNIYKLFTEKDASLAEINPLVMLKDGSLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + +EE+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVAELFEPTEEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K ++ +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVANGLLEAFKVIETDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  ++   G +      + DA  K V   K
Sbjct: 340 IRLTGTNEAEGRAIL--EGTHFTVGTSMADAGHKAVELSK 377


>gi|320166382|gb|EFW43281.1| succinate-CoA ligase [Capsaspora owczarzaki ATCC 30864]
          Length = 474

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 164/393 (41%), Positives = 240/393 (61%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  +L++  +   KG V  +   AE     L     V+K+Q+ AGGRGKG F+
Sbjct: 64  LSLHEYLSMDILQQNGIATPKGRVAKTPEEAEQVAAELGTEDIVIKAQVLAGGRGKGTFQ 123

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR   S          ++G  L+TKQTG  G   N VY+ +     RE Y 
Sbjct: 124 N---GLKGGVRTIYSPAEARMYAERMIGQRLVTKQTGAEGRVCNEVYICERLYARREYYF 180

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     + S+QGG+DIE VA + P  I K  ID   G++  +      ++   
Sbjct: 181 AILMDRATAGPLLVGSSQGGVDIETVAHENPDAIVKQAIDINKGLSEAEAIKFATLMGFS 240

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D  +    LY  F   D +++EINP+  + +G++  +D+K++FDDNA +R  ++ 
Sbjct: 241 PSCVRDAAENIIRLYNVFIKYDSTMVEINPMAEVSSGKVICMDAKLNFDDNAAFRQKEVF 300

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED RE+ A Q +L+YI LDG+IGC+VNGAGLAMAT+DIIKL+GG PANFLDVG
Sbjct: 301 ARRDYSQEDEREVRAAQADLNYIGLDGSIGCLVNGAGLAMATLDIIKLHGGNPANFLDVG 360

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFKII+SD  V  IL+NIFGGIMRCD++ +GI++A   + + IPL++RL+
Sbjct: 361 GGATAQQVTEAFKIISSDPKVTAILVNIFGGIMRCDIIAQGIIAAASTLDLRIPLIVRLQ 420

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V+    LI +SGL ++   +LD+AA++ V 
Sbjct: 421 GTRVNEAKELIDKSGLRIMLLNNLDEAAKRAVQ 453


>gi|302413247|ref|XP_003004456.1| succinyl-CoA ligase beta-chain [Verticillium albo-atrum VaMs.102]
 gi|261357032|gb|EEY19460.1| succinyl-CoA ligase beta-chain [Verticillium albo-atrum VaMs.102]
          Length = 431

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 168/396 (42%), Positives = 235/396 (59%), Gaps = 20/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V KG V  +   A++  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 38  LSIHEYLSADLLRQYGIDVPKGSVAKTAAEAKAIAKEIGGEDMVIKAQVLAGGRGKGTFD 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 98  N---GLKGGVRVIYSPHEAEMFADQMIGHKLVTKQTGAGGRLCNAVYICERKFARREFYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAKD P+ I    ID   GVT E    +   L   
Sbjct: 155 AILMDRASQTPVIVSSSQGGMDIEAVAKDSPEAINTTYIDINKGVTDEIARDIAVKLGFS 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA YR  ++ 
Sbjct: 215 EQCVEDAKDTIQKLYKIFTEKDSTQIEINPLSETSDHKVMCMDAKFGFDDNADYRQKEVF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 275 EWRDTTQEDADEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
                            D+ V  I +NIFGGI+RCD +  G+++ V+ + + IP++ RL+
Sbjct: 335 -----------------DAKVSAIFVNIFGGIVRCDHIATGLINTVQALDLKIPIIARLQ 377

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++   ++IA+SG+ +    +L  AA+K V   K
Sbjct: 378 GTNMEAAQKIIADSGMKIFAIDELQTAAEKAVQLSK 413


>gi|3766199|gb|AAC64397.1| GTP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
          Length = 404

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 228/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 10  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 70  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QG  DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 127 AILMDRSCNGPVLVGSPQGRSDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 187 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 247 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 307 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 366

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 367 GTNVQEAQKILNNSGLPITSAIDLED 392


>gi|324516298|gb|ADY46487.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Ascaris suum]
          Length = 436

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 174/393 (44%), Positives = 237/393 (60%), Gaps = 8/393 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    LL K  + V    V ++      A K + G  YVVK+QI AGGRGKG F   
Sbjct: 27  LHEHHGMDLLSKEQIRVPPYGVATTGDEVFEAAKKIGGKDYVVKAQILAGGRGKGYF--- 83

Query: 63  PADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             DS  +GGV+V  +          +LG+ LITKQT   G+    V V       RE Y 
Sbjct: 84  --DSGLQGGVQVVYTPDEAREKASLMLGAHLITKQTTHRGNLCERVMVCKRLFTRREYYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       +AS+ GG++IEEVA   P  I  + I+   G+T E+   + D L  Q
Sbjct: 142 SITLDRKHAGPVVVASSHGGVNIEEVAATDPNAIITVPINISQGMTEENAIEIADKLGFQ 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D+F  LY  F   D +LLEINP+    +G +  +D KI  D NA YR  D+ 
Sbjct: 202 GDCKTQAVDIFQKLYGLFAKSDATLLEINPMAEDVSGDVYCMDCKILVDTNAQYRQEDLF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED  E+ A   +L+YI L+G+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 262 KLQDRSQEDELEMRAAAAHLNYIRLEGDIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDS-SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGA   +V  AF+IIT D   V  IL+NIFGGIMRCDV+ +GI++A +E+ + IP+V+RL
Sbjct: 322 GGATVQQVTEAFRIITDDKHQVHAILVNIFGGIMRCDVIAQGIINAARELNLKIPIVVRL 381

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +G  VD    LIA+S + ++   +LD+AA+ +V
Sbjct: 382 QGTKVDDAKALIAQSEMRILACDNLDEAARLVV 414


>gi|298484467|ref|ZP_07002621.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. D22]
 gi|298269376|gb|EFI10983.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. D22]
          Length = 376

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 159/375 (42%), Positives = 222/375 (59%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+          +L   
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRSAFTLFPQ 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +E  G+       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH
Sbjct: 164 MEQAGKM----AAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I  L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PEIHALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P++
Sbjct: 280 LDIGGSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVI 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N  IG  L+
Sbjct: 340 VRLTGTNEHIGRELL 354


>gi|75764883|ref|ZP_00744242.1| Succinyl-CoA synthetase beta chain [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487628|gb|EAO51485.1| Succinyl-CoA synthetase beta chain [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 307

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 162/317 (51%), Positives = 206/317 (64%), Gaps = 18/317 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI ELRD+ EEDS+EIEA +++L+YI LDGNIG MVNGAGLAMATMDIIK Y G PANF
Sbjct: 227 KDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGRMVNGAGLAMATMDIIKHYHGDPANF 286

Query: 297 LDVGGGADQDKVAAAFK 313
           LDVGGGA  +KV  + +
Sbjct: 287 LDVGGGATAEKVTESIQ 303


>gi|260062191|ref|YP_003195271.1| succinyl-CoA synthetase subunit beta [Robiginitalea biformata
           HTCC2501]
 gi|88783753|gb|EAR14924.1| Succinyl-CoA synthetase, beta subunit [Robiginitalea biformata
           HTCC2501]
          Length = 397

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 166/402 (41%), Positives = 240/402 (59%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVI----SSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V      +V AA+   +      +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHNKKEAVDAAKQLTQETGTSWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V S   EI+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVESIAEEIIGMNLVTPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R    V  + S +GGMDIEEVA   P  IF   IDP  G+      
Sbjct: 111 DSDTEEYYMSVLLNRAESRVMIMYSPEGGMDIEEVADKTPHLIFTEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+   D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGTAFKEMTRFVSSLYKAYEQSDASLFEINPVLKTSDDKILAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+R     E+RD+ EE+  E+EA+   L+Y+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALFRRKQYAEMRDLREENPIEVEARAVGLNYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D++VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDANVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            I +P+++RL+G N ++   ++  SGL V +A+   +AA K+
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAVQFQEAADKV 392


>gi|288803535|ref|ZP_06408966.1| succinyl-CoA synthase, beta subunit [Prevotella melaninogenica D18]
 gi|288333958|gb|EFC72402.1| succinyl-CoA synthase, beta subunit [Prevotella melaninogenica D18]
          Length = 379

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 241/400 (60%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIICRTPDEAVEAYKQLGIEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGCNEAEIRQHAEAILGMDI-------KGFIVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDM 176
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP+IG++     E    L D 
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVIGMSDYLAREAAFKLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      +F N+YK F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH
Sbjct: 164 MAQVKQAV----PIFKNIYKLFTEKDASLAEINPLVMLKDGSLKAIDAKMTFDDNALFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL + +EE+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDVAELFEPTEEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K ++ +IP+V
Sbjct: 280 LDIGGSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVANGLLEAFKVIETDIPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  ++   G +      + DA  K V   K
Sbjct: 340 IRLTGTNEAEGRAIL--EGTHFTVGTSMADAGHKAVELSK 377


>gi|59808474|gb|AAH89863.1| Suclg2 protein [Rattus norvegicus]
          Length = 387

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 166/380 (43%), Positives = 227/380 (59%), Gaps = 7/380 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS-- 66
           K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F     DS  
Sbjct: 1   KKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVF-----DSGL 55

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR
Sbjct: 56  KGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDR 115

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           +      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +  
Sbjct: 116 SHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQ 175

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS 246
             D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  + D S
Sbjct: 176 AADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKS 235

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           E +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + 
Sbjct: 236 ENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKES 295

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
           +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV  
Sbjct: 296 QVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLEGTNVQE 355

Query: 367 GNRLIAESGLNVITAIDLDD 386
              ++  SGL + +A+DL+D
Sbjct: 356 AQNILKSSGLPITSAVDLED 375


>gi|86133730|ref|ZP_01052312.1| Succinyl-CoA synthetase, beta subunit [Polaribacter sp. MED152]
 gi|85820593|gb|EAQ41740.1| Succinyl-CoA synthetase, beta subunit [Polaribacter sp. MED152]
          Length = 398

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 168/408 (41%), Positives = 241/408 (59%), Gaps = 21/408 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V S+   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILNSFGVRIQRGIVASTPIEAVAAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S   +ILG  LIT QT   G  VN V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLEQVESIADDILGMMLITPQTSAEGKLVNQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDPL+G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGKNMIMYSTEGGMDIETVAEETPHLIFTEEIDPLLGLMPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D S+ EINP++   + ++  +D+K+S D+N
Sbjct: 171 KVAFNLGLSGTAFKEMTKFVSALYTAYIKSDSSMFEINPVLKTSDDKIMAVDAKVSLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD+ EE+  E+EAK   L+Y+ LDGN+GCMVNGAGLAM TMD+IK  GG
Sbjct: 231 ALFRHKDYAAMRDLREENPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMGTMDLIKESGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF II  D +VK IL+NIFGGI+RCD + +G++ A + +  
Sbjct: 291 EPANFLDVGGTADAQRVETAFGIILKDENVKAILVNIFGGIVRCDRVAQGVVDAYQSMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           KI +P++ RL+G N      LI  SG+ +I+A +  +AA K+   ++ 
Sbjct: 351 KITVPIICRLQGTNAKEAKELIDNSGMEIISATEFQEAADKVAEVLEA 398


>gi|309791923|ref|ZP_07686405.1| succinyl-CoA synthetase, beta subunit [Oscillochloris trichoides
           DG6]
 gi|308226041|gb|EFO79787.1| succinyl-CoA synthetase, beta subunit [Oscillochloris trichoides
           DG6]
          Length = 378

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 162/377 (42%), Positives = 230/377 (61%), Gaps = 19/377 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ LL +Y +PV  G V +S  A   AI    G   V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYQARDLLARYGIPVTGGGV-ASTPAEARAIAEQIGAKVVIKAQVFVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G  V  V V +     +E+YL
Sbjct: 57  -------GGVKLAETPEQAEQVAAQILGMDI-------KGLTVEKVLVAEAISYQKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  IAS +GG++IEEVAK  P  I K+   P +G+       L   + L+
Sbjct: 103 SAILDRATKRVMMIASAEGGVEIEEVAKTNPDAIIKIAAHPQLGLLEYQARELAFAIGLK 162

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+ F + D SL EINPL+I  +G L+ LDSK+  DD+ L+RH D+
Sbjct: 163 DGKQARQFAQIASALYRVFVETDASLAEINPLVIRDDGSLQALDSKVLLDDSGLFRHADL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           + +RD S+E   E +A++  +++I LDG IGCMVNGAGLAMATMD++KLYGG PANFLD+
Sbjct: 223 EAMRDPSDEPEAERQAREAGITFIKLDGTIGCMVNGAGLAMATMDVVKLYGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +DKV AA +II +D +VK ++ NIFGGI R D + +GI++A++EV   +P++ RL
Sbjct: 283 GGGAGKDKVKAALQIILADPNVKAVMFNIFGGITRVDEVARGIIAALEEVDTQVPMIARL 342

Query: 360 EGANVDIGNRLIAESGL 376
            G N + G RL+AES L
Sbjct: 343 TGTNEEEGRRLLAESRL 359


>gi|149372566|ref|ZP_01891678.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [unidentified eubacterium SCB49]
 gi|149354609|gb|EDM43173.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [unidentified eubacterium SCB49]
          Length = 396

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 171/401 (42%), Positives = 241/401 (60%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQAK +L  + V + +G+V ++   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQAKQILNSFGVEIQRGIVATTPEEAVAAAKKLTEDTGTGWHVLKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL  V     EI+G  L+T QT   G RV+ + V +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLDDVERIAGEIIGMDLVTPQTSAEGKRVHQILVTEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGRNMVMYSTEGGMDIETVAEETPHLIFHEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A          L  A+   D +L EINP++   + ++  +D+K++ D N
Sbjct: 171 KIAFNLGLSGMAFKQMTKFVTALVSAYEKSDSALFEINPVLKTSDDKIIAVDAKVTLDAN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D  E+RD  EE+  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHKDYIEMRDKREENPVEVEAGEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD ++V AAFK+I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVEAAFKLILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N DI   LI  SGL+V +AI+  +AA K+
Sbjct: 351 IEVPIIVRLQGTNADIAKELIDGSGLDVQSAIEFQEAADKV 391


>gi|308494725|ref|XP_003109551.1| hypothetical protein CRE_07436 [Caenorhabditis remanei]
 gi|308245741|gb|EFO89693.1| hypothetical protein CRE_07436 [Caenorhabditis remanei]
          Length = 439

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/395 (42%), Positives = 236/395 (59%), Gaps = 8/395 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    +L+ Y + V    V      A    K + G  YVVK+Q+ AGGRGKGRF   
Sbjct: 26  LHEHHGMKILQDYEIKVPPFGVAQDSDTAYKVAKKIGGKDYVVKAQVLAGGRGKGRFS-- 83

Query: 63  PADSKGGVRVESSLKSVISDIRE----ILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            +  +GGV++  +      ++++    ++G+ LITKQT   G +   V V       RE 
Sbjct: 84  -SGLQGGVQIVFTWYFSPDEVQQKAGMMIGAHLITKQTDHRGKKCEEVMVCKRLFTRREY 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+ +DR +     IAS+QGG++IEEVA   P  I K+ ID  +G+T E    +   + 
Sbjct: 143 YFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMG 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                     ++   LYK F   D +L+EINP+    NG +  +D K+  D NA +R   
Sbjct: 203 FSKDCEQQASEIIEKLYKMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFRQTK 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           + +L+D  +ED  EI A   NL+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 LFDLKDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGGEPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDS-SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           VGGGA  ++V  AFKIIT+D   V  IL+NIFGGIMRCDV+ +GI+ A +E+ + IP+V+
Sbjct: 323 VGGGATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIKAARELDLKIPIVV 382

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL+G  V+    LIA S L ++   +LD+AA+ +V
Sbjct: 383 RLQGTKVEDAKALIATSQLRILPCDNLDEAAKMVV 417


>gi|146299918|ref|YP_001194509.1| succinyl-CoA synthetase, beta subunit [Flavobacterium johnsoniae
           UW101]
 gi|189029909|sp|A5FHX8|SUCC_FLAJO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146154336|gb|ABQ05190.1| succinyl-CoA synthetase, beta subunit [Flavobacterium johnsoniae
           UW101]
          Length = 397

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 170/406 (41%), Positives = 243/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  Y V V +G+V ++   A +A K L        +V+K+QIHA     
Sbjct: 1   MNIHEYQGKEILASYGVRVQRGIVANNAVEAVAAAKQLTAETGTGWHVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  LIT QT P G +VN V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQQVEELAEQIIGMQLITPQTPPEGKKVNKVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP +G+      
Sbjct: 111 ESETSEFYVSVLLNRGTGRNMIMYSTEGGMDIEEVAEHTPHLIFTEEIDPTVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 171 RIAFNLGLSGNAFKEMVKFIDALYNAYIGSDASMFEINPVLKTSDNKILAVDAKVNIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     E+RD+ EE+  E+EAK+  L+Y+ LDG +GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALYRQPKYAEMRDIREENPIEVEAKEVGLNYVDLDGTVGCMVNGAGLAMATMDLIKYAGF 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVETAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N +I   LI  SG+ +++A+   +AA ++  A+
Sbjct: 351 AIKVPIIVRLQGTNAEIAKELIDNSGMPILSAVQFQEAADQVKAAL 396


>gi|293370303|ref|ZP_06616860.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CMC 3f]
 gi|292634598|gb|EFF53130.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CMC 3f]
          Length = 376

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/375 (42%), Positives = 222/375 (59%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+          SL   
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFSLFPQ 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +E  G+       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH
Sbjct: 164 MEQAGKM----AAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++  L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PEVHALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P++
Sbjct: 280 LDIGGSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVI 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N  IG  L+
Sbjct: 340 VRLTGTNEHIGRELL 354


>gi|160884542|ref|ZP_02065545.1| hypothetical protein BACOVA_02527 [Bacteroides ovatus ATCC 8483]
 gi|260174865|ref|ZP_05761277.1| succinyl-CoA synthetase beta chain [Bacteroides sp. D2]
 gi|315923110|ref|ZP_07919350.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D2]
 gi|156110281|gb|EDO12026.1| hypothetical protein BACOVA_02527 [Bacteroides ovatus ATCC 8483]
 gi|313696985|gb|EFS33820.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D2]
          Length = 376

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 160/375 (42%), Positives = 222/375 (59%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVIAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+          SL   
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFSLFPQ 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +E  G+       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH
Sbjct: 164 MEQAGKM----AAILQELYKIFMENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++  L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PEVHALFDPTEEERIEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  NIP++
Sbjct: 280 LDIGGSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNIPVI 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N  IG  L+
Sbjct: 340 VRLTGTNEHIGRELL 354


>gi|145529946|ref|XP_001450756.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418378|emb|CAK83359.1| unnamed protein product [Paramecium tetraurelia]
          Length = 429

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 166/403 (41%), Positives = 248/403 (61%), Gaps = 16/403 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV-HAAESAIKTLPG-------PLYVVKSQIHAG 52
           +++HEYQ     + + +P+  G +  +   A ++AIK +            VVK+Q H G
Sbjct: 12  LSLHEYQTAEFFKSFQLPIPPGKICKTPDEAYKAAIKIIQEGSERNSFTDLVVKAQCHTG 71

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE   +S  G+ + S+ + V     ++LG+TLITKQTG  G +   VYV +  
Sbjct: 72  GRGKGYFKENGFNS--GIHIVSNPEDVKEYASKMLGNTLITKQTGSLGKKCEMVYVVERN 129

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL---IDPLIGVTSED 169
            + +ELYLS+L+DR +G +  +AS +GG+ IEE   +Y +K    +   +D +     E+
Sbjct: 130 FLRKELYLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPNNVDEIDFSIYEN 189

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           V+ +  +  +Q        D+   ++  F   D +LLEINPL I   G L + D K++ D
Sbjct: 190 VSKVYKLNPIQHNQM---KDILKKMFDIFLQTDATLLEINPLGIDLQGNLIICDQKLNID 246

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DN+ +R   I  + DV ++D +E+EA++H L+YIALDGNIGCMVNGAGLAMATMD+IK Y
Sbjct: 247 DNSQFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVNGAGLAMATMDLIKQY 306

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
            G+PANFLDVGG A   ++ +A KI+  D +V+ IL+NIF GI RCD +V G+L  +  +
Sbjct: 307 EGSPANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIARCDQIVLGLLKGLTVL 366

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            +  P+V+R++G  V+   +LI ESG N+I   DLD+AA+K V
Sbjct: 367 GMKKPMVLRMKGTKVEEAKKLIDESGFNMIFTEDLDEAAKKAV 409


>gi|156546288|ref|XP_001605967.1| PREDICTED: similar to ENSANGP00000017707 [Nasonia vitripennis]
          Length = 449

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 168/385 (43%), Positives = 246/385 (63%), Gaps = 7/385 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           +N+HE QA  LL+   +P  K GV  +   AAE A + L     V+K+Q+ AGGRGKG+F
Sbjct: 35  LNVHENQAYTLLKSMGIPTPKFGVAKTPEEAAEIA-RELDSKDLVLKAQVLAGGRGKGKF 93

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                 +  GV +  + +       ++LG  L+TKQTG  G   N V +       +ELY
Sbjct: 94  S---GSNVSGVVMCETPEEAKELASKMLGKYLVTKQTGEVGRICNEVMITTRMFTRKELY 150

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS++++R+      IAS++GG++IE++A   P+ I    +D   G+T E   ++     +
Sbjct: 151 LSVMMERSFDGPVIIASSEGGVNIEDIAATNPEAISYTPVDIRKGLTCEQADAIACRFGV 210

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G  R+   ++  NLY+ F +KD  LLEINPL+    G+   LD K +FDD+A +R  D+
Sbjct: 211 -GDPRV-LSEIVCNLYELFIEKDALLLEINPLVQDICGQYFALDCKCNFDDSASFRQKDL 268

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D S+++  E++A +  L+YIALDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 269 FALQDWSQKNPMEVKADKIGLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDV 328

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA    V  AFKII+SD  V+ I +NIFGGI+RCDV+ +GI++A +++K+N+P+++RL
Sbjct: 329 GGGASVKTVTEAFKIISSDPKVESIFVNIFGGIIRCDVIAEGIIAAFQDLKLNVPVIVRL 388

Query: 360 EGANVDIGNRLIAESGLNVITAIDL 384
           +G N + G +LI ++ L +I   D+
Sbjct: 389 QGTNAEKGKKLIMDAKLKIIPIDDM 413


>gi|288924929|ref|ZP_06418865.1| succinyl-CoA synthase, beta subunit [Prevotella buccae D17]
 gi|288338119|gb|EFC76469.1| succinyl-CoA synthase, beta subunit [Prevotella buccae D17]
          Length = 377

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 175/400 (43%), Positives = 239/400 (59%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV   ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGFFASYGLPVDNSILCFTPDEAVAAYKKLGVERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLAGSEAEVKECAEAILGMNI-------KGFTVDRVLVGEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP IG+      E    L D 
Sbjct: 104 SIVIDRKSKTAILMLSREGGMDIEAVAKETPEKIFKIAIDPTIGLADFKAREAALKLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      LF  LY+ F +KD SL EINPL+ +K+G L+ +D+K++FDDNALYRH
Sbjct: 164 MAQVKQAI----PLFQKLYQLFVEKDASLAEINPLVKLKDGSLKAIDAKMTFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI  + + + E+ +E EAK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDISAMFEPTVEEKKEHEAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ +D  VK +LINIFGGI RCD + KG++ A KE+K ++P+V
Sbjct: 280 LDIGGSSNPQKIVEAMKLLLADKHVKVVLINIFGGITRCDDVAKGLIEAFKEIKTDMPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  L+  +  +V  A  + +A +K V   K
Sbjct: 340 IRLTGTNEAEGRELLKGTAFHV--AATMSEAGRKAVELAK 377


>gi|332883389|gb|EGK03672.1| succinyl-CoA ligase subunit beta [Dysgonomonas mossii DSM 22836]
          Length = 378

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 166/397 (41%), Positives = 236/397 (59%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L   Y +PV + ++      A  A + L     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKELFSSYGIPVKEQILCYEPGEAAVAYEELDTECVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG T+        G  V  V V +  DI  E Y+
Sbjct: 58  -------GGVKLAKSKEEAKDHAKNILGLTI-------KGYPVTKVIVTEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  +   +GG+DIEEVA+  P+KI+K  IDPLIG+  + +A     +  Q
Sbjct: 104 SFIIDRNTKSVILMMCAEGGVDIEEVAEKTPEKIYKFAIDPLIGL-PDYLARKFAFVLFQ 162

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              +++    +   LYK F DKD SL EINPL+  K+G+L  +D+K++FDDNALYR  +I
Sbjct: 163 DLNQVNQLASILQKLYKLFIDKDASLAEINPLVTTKDGKLLAVDAKMTFDDNALYRQPEI 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L + +E++  E  AK+   S++ LDG IGCMVNGAGLAMATMD+IKLYGGAPANFLD+
Sbjct: 223 LSLFEPTEDEKVETAAKEKGFSFVRLDGEIGCMVNGAGLAMATMDMIKLYGGAPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG ++ +KV  A  ++  D  VK +LINIFGGI RCD +  G+LSA +++K +IP+++RL
Sbjct: 283 GGSSNPNKVIDAMTLLLKDPKVKVVLINIFGGITRCDDVASGLLSAFEQLKTDIPVIVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  ++  +   V  A  + +A +  V A K
Sbjct: 343 TGTNEKEGREMLLGTRFKV--AETMSEATRMAVAASK 377


>gi|242007846|ref|XP_002424730.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
 gi|212508223|gb|EEB11992.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
          Length = 372

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 160/359 (44%), Positives = 227/359 (63%), Gaps = 3/359 (0%)

Query: 23  VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISD 82
           +++S+   A+   K L    YVVK+QI AGGRG G F       KGGV +  +   V + 
Sbjct: 1   MLVSNHDEADKVAKDLRVEEYVVKAQILAGGRGVGVFSN---GFKGGVHLTKNPSEVGNL 57

Query: 83  IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMD 142
           ++++LG+ LITKQT   G  VN V V +  DI +E Y S+L+DRT      + S +GG+D
Sbjct: 58  VKQMLGNKLITKQTPKDGILVNKVMVAESVDIQKETYFSILMDRTHNGPVVVVSAEGGVD 117

Query: 143 IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKD 202
           IE VA+  P+ I  + ID   G+T +      + L+  G ++         L+K F D D
Sbjct: 118 IENVAEKNPEAIKIIPIDIFKGLTDDIAVQAAEFLKFTGVSKEKAVSEMKKLWKFFLDVD 177

Query: 203 MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSY 262
            + +EINPL       +  +D+KI+FDDNA YR  DI E+ + +E D RE+ A Q NL+Y
Sbjct: 178 ATQVEINPLAESSKNDVVAVDAKINFDDNAQYRQKDIFEMENKTEIDPRELLASQFNLNY 237

Query: 263 IALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVK 322
           I L+GNIGC+VNGAGLAMATMDIIKL GG PANFLDVGG  ++++V  AFK++T D+ VK
Sbjct: 238 IPLEGNIGCLVNGAGLAMATMDIIKLEGGEPANFLDVGGNVNENQVTEAFKLLTYDNKVK 297

Query: 323 GILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
            IL+N+FGGI+ C  + KGI++A K++ +  P+V+RLEG NV+   +++  SGL +I A
Sbjct: 298 AILVNVFGGIVNCATIAKGIVAACKKINVKTPIVVRLEGTNVNEAKKILENSGLPIINA 356


>gi|89890669|ref|ZP_01202178.1| succinyl-CoA synthetase beta chain [Flavobacteria bacterium BBFL7]
 gi|89516814|gb|EAS19472.1| succinyl-CoA synthetase beta chain [Flavobacteria bacterium BBFL7]
          Length = 397

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 174/408 (42%), Positives = 244/408 (59%), Gaps = 22/408 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  Y V + +G V ++   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASYGVTIQRGKVATTAAEAVAAAKELTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-----EDG 111
                      GGV++  +L+ V     +I+G  L+T QT   G RV+ V V     E G
Sbjct: 56  -----GGRGKGGGVKLAKNLEQVEEIAGQIIGMDLVTPQTSAEGKRVHQVLVAEDVYEPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              + E Y+S+L+DR  G    + ST+GGMDIE VA++ P  IF   ID   G+      
Sbjct: 111 EVEVEEFYMSVLLDRAQGKNMIMYSTEGGMDIETVAEETPHLIFTETIDASHGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A  +       LY A+   D +L EINP++   + R+  +D KI+ D+N
Sbjct: 171 RIAFNLGLSGKAFKEMTKFVAALYNAYVGSDSALFEINPVLKASDNRIIAVDCKITLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+  +RD  EE++ E+EAK   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDLAAMRDTREENATEVEAKAVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D  V+ IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDDKVEAILVNIFGGIVRCDRVAQGIVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            IN+P+++RL+G N +I   LI  SGL+V +A++  +AA K V AV G
Sbjct: 351 AINVPIIVRLQGTNAEIAKELIDNSGLDVQSAVEFQEAADK-VQAVIG 397


>gi|118365146|ref|XP_001015794.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila]
 gi|89297561|gb|EAR95549.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 534

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 174/438 (39%), Positives = 249/438 (56%), Gaps = 53/438 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL------------YVVKSQIH 50
           +HEYQ   LL+KY++PV  G V +S   A +  + L                +VVK+QIH
Sbjct: 82  LHEYQVMDLLQKYDLPVISGSVATSAEQALNVAQQLKNSKPTNQSQGITFTDFVVKAQIH 141

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV---- 106
           AGGRGKG FKE    S  GV+  +S + V     ++LG TLITKQTG  G  VN V    
Sbjct: 142 AGGRGKGFFKENGMQS--GVQFATSPQEVKDIAEKMLGKTLITKQTGLRGRSVNSVLVVE 199

Query: 107 -----------------------YVEDGADILR---------ELYLSLLVDRTSGMVAFI 134
                                  ++      +R         ELYL++ +DR  G V  I
Sbjct: 200 RTFLRKVICFRNRIVYLFIPQYKFMRKWQQCVRLMFLNKQKQELYLAITLDRKQGGVVII 259

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
            + +GG++IE+  +   +  F   ++   G+T + +  +   L L  Q       +   L
Sbjct: 260 CNERGGVNIEQQDESSVKTHF---VNVHEGLTQQTLDDISKSLNLGSQYNDQLHKIVKGL 316

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           YK F + D +LLEINPL +  +G+L + D K++ DDNA YR  +I ++ D++++DS+EIE
Sbjct: 317 YKCFSETDSTLLEINPLGLTIDGKLLICDQKMNVDDNAAYRQPEIAQMEDITQKDSKEIE 376

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A Q+ L+YIALDGNIGCMVNGAGLAMATMD+I+   G PANFLD GG AD  +V AA KI
Sbjct: 377 ADQNALNYIALDGNIGCMVNGAGLAMATMDLIQSKNGMPANFLDCGGKADDRQVFAALKI 436

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           +  D +V+ I +NIF GI RCD++  G++ A+ E+ +  P+V+RL+G NVD   ++I +S
Sbjct: 437 MEQDPNVEAIFVNIFAGITRCDIICLGLIRALSELGMKKPIVLRLKGTNVDEAKQIIQDS 496

Query: 375 GLNVITAIDLDDAAQKIV 392
           G N++   DL  AA+K V
Sbjct: 497 GFNMLVTEDLSQAAEKAV 514


>gi|150024993|ref|YP_001295819.1| succinyl-CoA synthetase, beta subunit [Flavobacterium psychrophilum
           JIP02/86]
 gi|189030241|sp|A6GY30|SUCC_FLAPJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|149771534|emb|CAL43003.1| Succinyl-CoA synthetase, beta subunit [Flavobacterium psychrophilum
           JIP02/86]
          Length = 398

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 164/406 (40%), Positives = 242/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  Y V + +G+V    + +V AA+          YVVK+Q+HA     
Sbjct: 1   MNIHEYQGKEILASYGVRIQRGIVANNPVEAVAAAKQLTTETGTSWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  LIT QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQQVEEISEQIIGMQLITPQTSAEGKKVHKVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R++G    + ST+GGMDIEEVA   P  I    IDP +G+ +    
Sbjct: 111 ESETSEFYISVLLNRSTGRNMIVYSTEGGMDIEEVAAHTPHLIHNEEIDPSVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LY A+   D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 171 RIAFNLGLSGNAFKEMVKFIDSLYNAYIGSDASMFEINPVLKTSDDKIMAVDAKVNIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     ++RD+ EE+  E+EAK+  L+Y+ LDG +GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALYRQPKYADMRDIREENPIEVEAKEVGLNYVDLDGTVGCMVNGAGLAMATMDLIKYAGF 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVETAFRIILKDENVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N +I   LI  SG+ +++A+   +AA ++  A+
Sbjct: 351 AIKVPIIVRLQGTNAEIAKELIDNSGMPILSAVQFQEAADQVKAAL 396


>gi|66548265|ref|XP_624365.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Apis mellifera]
          Length = 449

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 166/388 (42%), Positives = 234/388 (60%), Gaps = 3/388 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHE  A  LL+   +P     V  +   AE     L     V+K+Q+ AGGRG G FK
Sbjct: 35  LQIHENLAYTLLKDAGIPTPPFGVAKTPEEAEKIAANLNTKDIVLKAQVLAGGRGIGHFK 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +   + +G V  ES  K   +    ++G  LITKQTGP G   N V V       +E Y+
Sbjct: 95  D--TNVRGVVMCESP-KEAKTVASSMIGKLLITKQTGPAGKICNSVMVTTRMFPRKEYYI 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++++ T      I S QGG++IE++A   P+ I    ID + G+T E +  + D L L+
Sbjct: 152 SVMLETTFDGPVIIVSKQGGVNIEDIAATSPEAISYTPIDIMKGLTLEQINKIVDNLGLE 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+++     +  NLY+ F +KD  LLEINP  +        LD K SFDD+A +R  ++ 
Sbjct: 212 GESKKLTSIIICNLYELFIEKDALLLEINPFALDICEEYFALDCKCSFDDSAEFRQKELF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+S+ D  E+ A + NL+YI LDGNIGC+VNGAGLAMATMD+IK+ GG PANFLDVG
Sbjct: 272 NLQDISQIDPSELHATKFNLNYIHLDGNIGCLVNGAGLAMATMDVIKMNGGFPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++ V   FKII SD +V+ I +NIFGGIMRCD++ +GI++A KE++I +P+V+RL+
Sbjct: 332 GSATKEAVTEGFKIILSDPNVEAIFVNIFGGIMRCDIIAQGIIAASKELQIKVPIVVRLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAA 388
           G  V   N+LI ++ L V    D   AA
Sbjct: 392 GTRVKEANQLIKDAQLKVFVEEDFSTAA 419


>gi|161075765|gb|ABX56630.1| succinyl-CoA synthetase subunit beta [Methylacidiphilum infernorum
           V4]
          Length = 394

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 162/397 (40%), Positives = 245/397 (61%), Gaps = 5/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ EY AK +L K  V + + GV  +   A + AIK    PL VVK+QI AGGR KG+F
Sbjct: 1   MNLLEYVAKEILAKEGVAIPRYGVAETPQEAFDIAIKLNTTPL-VVKAQISAGGRAKGKF 59

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  +GGV++ +S + V     +++G  L+T QTG TG  V  V V +  D+ +ELY
Sbjct: 60  VN---GFEGGVKICNSPEEVKQVAEKMIGGLLVTAQTGTTGQPVRKVIVSESIDVAKELY 116

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL        +  + S  GG++IE +A + PQ + K    P   +    +      L  
Sbjct: 117 LSLTYSYAEAAILAMGSLAGGVNIERIALENPQALVKKYFYPEEPLWDFQLREFAAQLGF 176

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+  +D   +  +L+ AF + D +L EINPL + K  R   LD+KI+ DDN+L+R  ++
Sbjct: 177 KGKPLVDFSKILKSLFYAFINHDATLCEINPLALDKENRFWALDAKITIDDNSLFRRNEL 236

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              R  +  D +E+EA ++ ++Y+ L+G IGCMVNGAGLAMATMDI++ +GG PANFLDV
Sbjct: 237 LGYRFETVYDPQELEALRYGVNYVGLEGQIGCMVNGAGLAMATMDILERFGGKPANFLDV 296

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGADQ ++  AF+++ S+ ++K ILINIFGGIMRCD++ + I+ A K     +P+++RL
Sbjct: 297 GGGADQSQLQNAFRVLLSNPNLKVILINIFGGIMRCDLIAEAIVEAAKNHPPKVPIIIRL 356

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG  V+ G +++  S L  + A DL++AA++ V+ +K
Sbjct: 357 EGTRVEEGKKILKGSALQYVFAGDLEEAAKQAVYFLK 393


>gi|319760465|ref|YP_004124403.1| succinyl-CoA ligase subunit beta [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039179|gb|ADV33729.1| succinyl-CoA ligase subunit beta [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 395

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 160/405 (39%), Positives = 237/405 (58%), Gaps = 22/405 (5%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSV----HAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           N++EYQAK L RK+ +P+ K  + S +    H   S I  + GP ++VK QIH+GGRGK 
Sbjct: 3   NLYEYQAKKLFRKFKIPILKNWIFSDISEIKHCTSSVI--MDGPPWIVKCQIHSGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V +SL+ + S     LG+ LIT QT   G  VN + VE     + E
Sbjct: 61  ----------GGVKVANSLEDIYSFATHWLGNRLITDQTSKKGDVVNYILVEPAIKFINE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y SL +DR S  +  I S +GG+DIE      P  IFK+ IDP++G        L D L
Sbjct: 111 FYFSLFIDRDSSQILCIVSVKGGIDIENTINKSPDLIFKISIDPMVGAYPYQGRILADKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+G        ++ ++ + F + D++L+EINP II  N  L  LD+K+S D N+ +R  
Sbjct: 171 NLKGIEINKFVQIYIDIVRMFLENDLTLVEINPFIIDNNHNLLCLDAKVSVDSNSFFRQP 230

Query: 238 DIQEL----RDVSEEDSREIEAKQH-NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           ++  L       +  +++ +   Q  +++Y++L GNIGCMVNGAGLAMATMD+IK  GG 
Sbjct: 231 NLLSLCLNKHSTNNLNNKLVPLSQDLSINYVSLHGNIGCMVNGAGLAMATMDLIKSLGGE 290

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKI 351
           PANFLD+GG  D D + +AF +I   +SVK + +NIFGGI+ CD++  GI++ + K +  
Sbjct: 291 PANFLDIGGDTDMDSLMSAFTMILKKTSVKAVFVNIFGGIVCCDLVADGIIAVLTKNINN 350

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           ++P+V+RLEG N  +G++ +  S LN+    +L DA    +  VK
Sbjct: 351 HVPVVIRLEGNNAILGHKKLINSKLNIFVVNNLLDAVHHTIELVK 395


>gi|189219057|ref|YP_001939698.1| Succinyl-CoA synthetase, beta subunit [Methylacidiphilum infernorum
           V4]
 gi|189185915|gb|ACD83100.1| Succinyl-CoA synthetase, beta subunit [Methylacidiphilum infernorum
           V4]
          Length = 395

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 162/397 (40%), Positives = 245/397 (61%), Gaps = 5/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ EY AK +L K  V + + GV  +   A + AIK    PL VVK+QI AGGR KG+F
Sbjct: 2   MNLLEYVAKEILAKEGVAIPRYGVAETPQEAFDIAIKLNTTPL-VVKAQISAGGRAKGKF 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  +GGV++ +S + V     +++G  L+T QTG TG  V  V V +  D+ +ELY
Sbjct: 61  VN---GFEGGVKICNSPEEVKQVAEKMIGGLLVTAQTGTTGQPVRKVIVSESIDVAKELY 117

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL        +  + S  GG++IE +A + PQ + K    P   +    +      L  
Sbjct: 118 LSLTYSYAEAAILAMGSLAGGVNIERIALENPQALVKKYFYPEEPLWDFQLREFAAQLGF 177

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+  +D   +  +L+ AF + D +L EINPL + K  R   LD+KI+ DDN+L+R  ++
Sbjct: 178 KGKPLVDFSKILKSLFYAFINHDATLCEINPLALDKENRFWALDAKITIDDNSLFRRNEL 237

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              R  +  D +E+EA ++ ++Y+ L+G IGCMVNGAGLAMATMDI++ +GG PANFLDV
Sbjct: 238 LGYRFETVYDPQELEALRYGVNYVGLEGQIGCMVNGAGLAMATMDILERFGGKPANFLDV 297

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGADQ ++  AF+++ S+ ++K ILINIFGGIMRCD++ + I+ A K     +P+++RL
Sbjct: 298 GGGADQSQLQNAFRVLLSNPNLKVILINIFGGIMRCDLIAEAIVEAAKNHPPKVPIIIRL 357

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG  V+ G +++  S L  + A DL++AA++ V+ +K
Sbjct: 358 EGTRVEEGKKILKGSALQYVFAGDLEEAAKQAVYFLK 394


>gi|313214519|emb|CBY40868.1| unnamed protein product [Oikopleura dioica]
 gi|313226411|emb|CBY21555.1| unnamed protein product [Oikopleura dioica]
          Length = 374

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 218/355 (61%), Gaps = 3/355 (0%)

Query: 41  PLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           P  V+K+QI AGGRGKG F       KGGV   +        +++++G+ L TKQT P G
Sbjct: 21  PELVIKAQILAGGRGKGTFD---TGFKGGVHFATDPAKCGEYVKQMIGNRLTTKQTLPEG 77

Query: 101 SRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
             V  V V    DI RE YL++L+DR       + S  GGMDIEEVA+  P++IF + ID
Sbjct: 78  VPVQKVMVAHALDISRETYLAVLMDREFNGPVIVGSPDGGMDIEEVAEKTPERIFTMPID 137

Query: 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
              G++ E    +   L+  G+      +    LY  F   D + +EINP      G + 
Sbjct: 138 INDGISMEQALEMAKNLQFTGEKANTAAEQIMKLYNMFIAVDATQVEINPFGETPQGEVV 197

Query: 221 VLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAM 280
             D+KI+FDDNA YR  DI  + D +E D RE+EA++  L+Y+ +DG+IGC+VNGAGLAM
Sbjct: 198 CFDAKINFDDNAAYRQQDIFAMGDDTETDPREVEAEKFGLNYVGMDGDIGCLVNGAGLAM 257

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK 340
           ATMDIIKL GG PANFLD+GGG  +  V  A +IITSD++VK +L+NIFGGI+ C+++ +
Sbjct: 258 ATMDIIKLEGGEPANFLDLGGGVQESGVFEALRIITSDAAVKVVLVNIFGGIVNCEIIAR 317

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G+  A +E+ I  PLV RLEG NVD    ++A+ G  VIT+    +AA K V A+
Sbjct: 318 GVNRAYEELGITTPLVCRLEGTNVDSAKEILAKGGHPVITSDSFGEAAVKAVAAL 372


>gi|237713287|ref|ZP_04543768.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D1]
 gi|262406574|ref|ZP_06083123.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_22]
 gi|294647281|ref|ZP_06724876.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CC 2a]
 gi|294808526|ref|ZP_06767274.1| succinate-CoA ligase, beta subunit [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446754|gb|EEO52545.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D1]
 gi|262355277|gb|EEZ04368.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_22]
 gi|292637357|gb|EFF55780.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CC 2a]
 gi|294444259|gb|EFG12978.1| succinate-CoA ligase, beta subunit [Bacteroides xylanisolvens SD CC
           1b]
 gi|295084310|emb|CBK65833.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bacteroides
           xylanisolvens XB1A]
          Length = 376

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 157/371 (42%), Positives = 217/371 (58%), Gaps = 17/371 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    +   ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAMNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFTLFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH +I 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+ KLYGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMTKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLI 371
           G N  IG  L+
Sbjct: 344 GTNEHIGRELL 354


>gi|145520645|ref|XP_001446178.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413655|emb|CAK78781.1| unnamed protein product [Paramecium tetraurelia]
          Length = 429

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 165/403 (40%), Positives = 245/403 (60%), Gaps = 16/403 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV-HAAESAIKTLPG-------PLYVVKSQIHAG 52
           +++HEYQ     + + +P+  G +  +   A +SA K +            VVK+Q H G
Sbjct: 12  LSLHEYQTAEFFKSFQLPIPPGRICKTPDEAYKSAQKIIQEGSERNSFTDVVVKAQCHTG 71

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE   +S  G+ + S+   V     ++LG+TLITKQTG  G +   VYV +  
Sbjct: 72  GRGKGYFKENGFNS--GIHIASTPDDVKEYASKMLGNTLITKQTGSLGKKCEMVYVVERN 129

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL---IDPLIGVTSED 169
            + +ELYLS+L+DR +G +  +AS +GG+ IEE   +Y +K    +   +D +     E 
Sbjct: 130 FLRKELYLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPSNVDDIDFSIYEK 189

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           V+ +  +  +Q        D+   ++  F   D +LLEINPL I   G L + D K++ D
Sbjct: 190 VSKVYKLNPIQHNQM---KDILKKMFDIFLQTDATLLEINPLGIDLQGNLIICDQKLNID 246

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DN+ +R   I  + DV ++D +E+EA++H L+YIALDGNIGCMVNGAGLAMATMD+IK Y
Sbjct: 247 DNSQFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVNGAGLAMATMDLIKQY 306

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
            G+PANFLDVGG A   ++ +A KI+  D +V+ IL+NIF GI RCD +V G+L  +  +
Sbjct: 307 DGSPANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIARCDQIVLGLLKGLTVL 366

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            +  P+V+R++G  +D   +LI ESG N++   DLD+AA+K V
Sbjct: 367 GMKKPMVLRMKGTKIDEAKKLIEESGFNMMFTEDLDEAAKKAV 409


>gi|241693179|ref|XP_002411799.1| succinyl-CoA synthetase, beta subunit, putative [Ixodes scapularis]
 gi|215504669|gb|EEC14163.1| succinyl-CoA synthetase, beta subunit, putative [Ixodes scapularis]
          Length = 425

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 173/395 (43%), Positives = 240/395 (60%), Gaps = 14/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIHAGGRGK 56
           +N+HE  +  LL+   V V K  V S+   AE   + L G    P+++  S +HA  + +
Sbjct: 6   LNLHENVSMQLLQDNGVNVPKFGVASTPDEAEEIAQRLGGSQETPVHIWFSHMHALVQRE 65

Query: 57  --GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
             G  + L    +      S  K + S   ++LG  L TKQTG  G RV+ V V +    
Sbjct: 66  HVGTLRSLVCTHR-----PSEAKQISS---QMLGYMLRTKQTGEKGIRVDKVMVTERLYN 117

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            RE Y +L+++R       +AS+QGG++IEEVAK+ P  I KL I    G+  ++ + L 
Sbjct: 118 RREYYFALMMEREFNGPLIVASSQGGVNIEEVAKENPDAILKLPISIDSGIDRDETSKLV 177

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
             L     A      L  NLY  F   D +LLEINPL+   +G++  LD+K  FDDNA +
Sbjct: 178 KQLGFHPSAVEGAVTLIENLYNVFLKYDATLLEINPLVEDNHGKVYCLDAKCRFDDNADF 237

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R  D+  LRD ++ D RE EA   NL+YIALDG+IGC+VNGAGLAMATMDIIKL+GG+PA
Sbjct: 238 RQKDLFALRDWTQLDEREREAHDCNLNYIALDGDIGCLVNGAGLAMATMDIIKLHGGSPA 297

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA   +V  AF++ITSD  V+ IL+NIFGGIMRCDV+ +G++ A + + + IP
Sbjct: 298 NFLDVGGGATAHQVTEAFRLITSDQKVQAILVNIFGGIMRCDVIAEGVIRAAETLDLKIP 357

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           +V+RL+G  VD    LIA S L ++   +LD+AA+
Sbjct: 358 IVVRLQGTQVDEAKALIATSKLKILACDNLDEAAK 392


>gi|221090943|ref|XP_002165337.1| PREDICTED: similar to succinate-CoA ligase, ADP-forming, beta
           subunit [Hydra magnipapillata]
          Length = 409

 Score =  295 bits (755), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 169/394 (42%), Positives = 235/394 (59%), Gaps = 62/394 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY A  +LRK ++ V +G V  +   A +  K++    +V+K+Q+ AGGRGKG F 
Sbjct: 54  LSVHEYIAIDMLRKADIKVPRGDVARTQEEALNVAKSIGTHDFVIKAQVLAGGRGKGHF- 112

Query: 61  ELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               DS  KGGV++  S K V     ++LG  L T QTG  G   N V + +     RE 
Sbjct: 113 ----DSGLKGGVKIAYSAKEVAEIADKMLGQKLYTLQTGSDGRPCNEVLIVERLYPRREY 168

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+++ +DR +     IAS+QGGM IE+VA++ P  I K  ID                  
Sbjct: 169 YVAITLDRKAKGPLLIASSQGGMSIEDVARENPDAIIKHPID------------------ 210

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                          +++  C                      +D K++FDDNAL+RH +
Sbjct: 211 ---------------IFEVLC----------------------MDCKLTFDDNALFRHKE 233

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  L+D +++D RE+EA ++NL+YI L+G+IGC+VNGAGLAMATMDIIKL GGAPANFLD
Sbjct: 234 LIALKDWTQDDHREVEASRYNLNYIGLEGSIGCLVNGAGLAMATMDIIKLNGGAPANFLD 293

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + V AAF+II+SD  VK IL+NIFGGIM+CDV+ +GI+ A K + + IPLV+R
Sbjct: 294 VGGGATAEAVTAAFRIISSDRRVKAILVNIFGGIMKCDVIAEGIIEAAKALHLKIPLVVR 353

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           L+G NVD    LIA SGL ++   DLDDAA+ +V
Sbjct: 354 LQGTNVDDAKALIANSGLRILPCDDLDDAARMVV 387


>gi|71398764|ref|XP_802641.1| succinyl-CoA ligase [GDP-forming] subunit beta [Trypanosoma cruzi
           strain CL Brener]
 gi|70864362|gb|EAN81195.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           cruzi]
          Length = 319

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 147/305 (48%), Positives = 216/305 (70%), Gaps = 2/305 (0%)

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLLVDRTSGMVAFIASTQGGMD 142
           +++L  TL+TKQTGP G RVN +YV +    I RELYL+LL+DR +    FI S +GGM 
Sbjct: 2   KKMLNKTLVTKQTGPKGQRVNLLYVTEAVTGIKRELYLALLLDRKTASPMFIGSAEGGMG 61

Query: 143 IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKD 202
           IEE+A+  P+KI ++ I+   G++ ++  +    L   G+A  +  +    LY     KD
Sbjct: 62  IEELAQKCPEKIKRMRINVQEGISHDNCVAFAKELGFSGRASENAAEQVKALYNVGKSKD 121

Query: 203 MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSY 262
            + +EINPL+ ++NG +  +D+K+SFDDNA +R  DI  L D ++ D +E+ AK+++L+Y
Sbjct: 122 CTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIFSLADDTQIDPKEVLAKKYDLNY 181

Query: 263 IALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVK 322
           IALDGN+GC+VNGAGLAMATMD+I + GG PANFLDVGG A ++++ AAF+IIT D  VK
Sbjct: 182 IALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVGGSATREQIVAAFQIITGDEKVK 241

Query: 323 GILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRLEGANVDIGNRLIAESGLNVITA 381
           GIL+NIFGGIMRCD++ +GI++A +E+K  NIP+V+RL G+  + G R++ ESGL +  A
Sbjct: 242 GILVNIFGGIMRCDIIAEGIVAASRELKDRNIPVVVRLSGSKEEEGKRILQESGLPLHPA 301

Query: 382 IDLDD 386
            + ++
Sbjct: 302 RNFEE 306


>gi|299145915|ref|ZP_07038983.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. 3_1_23]
 gi|298516406|gb|EFI40287.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. 3_1_23]
          Length = 376

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/375 (42%), Positives = 221/375 (58%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+          SL   
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFSLFPQ 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +E  G+       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH
Sbjct: 164 MEQAGKM----AAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++  L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG  ANF
Sbjct: 220 PEVHALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQSANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P++
Sbjct: 280 LDIGGSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVI 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N  IG  L+
Sbjct: 340 VRLTGTNEHIGRELL 354


>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]
          Length = 1641

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 170/401 (42%), Positives = 244/401 (60%), Gaps = 12/401 (2%)

Query: 1    MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            +N+ EYQ+K LLR   V V    ++  ++ A SA++ L    YV+K+Q+ AGGRGKG F 
Sbjct: 1247 LNLLEYQSKELLRDCGVSVQNFAIVDDLNKANSALQNLHANEYVIKAQVLAGGRGKGWFD 1306

Query: 61   ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  KGGV +    K+VI  ++ +LG  L TKQT   G  V  + + +  +I RE Y+
Sbjct: 1307 N---GFKGGVHLTKDRKAVIDVVKNMLGHRLFTKQTSEDGILVQKIMIAESVNIARETYI 1363

Query: 121  SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE---DVASLCDML 177
             +L+DR       IAS  GGMDIE VA+  P+ I  + +D   G+  E   DV+     +
Sbjct: 1364 CILMDRQYNGPVLIASPAGGMDIETVAEKNPELIKTIPLDIYYGIDDEIAKDVSIFLGFM 1423

Query: 178  E--LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            +  +Q +A  +      NL+K F D D   +EINPL+   + ++  +D+KISFDDNA +R
Sbjct: 1424 DPTVQQKAIYE----LKNLWKLFVDIDALQVEINPLVETTDNQVIAVDAKISFDDNAQFR 1479

Query: 236  HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
              D+  L +   +D RE +A + +L+YI           GAGLAMATMDIIKL GG+PAN
Sbjct: 1480 QQDLFALENNDTKDPREADALRFDLNYIXXXXXXXXXXXGAGLAMATMDIIKLNGGSPAN 1539

Query: 296  FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
            FLDVGG   +++V  AF+I++ D  VK IL+N+FGGI+ C  + KGI++A   +++ IPL
Sbjct: 1540 FLDVGGSVKENQVYQAFRILSEDPKVKVILVNVFGGIVNCATIAKGIIAASHNLQLKIPL 1599

Query: 356  VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            V+RLEG NV    +L+AES L++ITA DLD+AA+K V  VK
Sbjct: 1600 VIRLEGTNVTEAKKLLAESNLSIITANDLDEAAKKAVTFVK 1640


>gi|29346198|ref|NP_809701.1| succinyl-CoA synthetase beta chain [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568370|ref|ZP_04845781.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 1_1_6]
 gi|81445237|sp|Q8A9M7|SUCC_BACTN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29338093|gb|AAO75895.1| succinyl-CoA synthetase beta chain [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251842443|gb|EES70523.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 1_1_6]
          Length = 376

 Score =  292 bits (748), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 159/375 (42%), Positives = 221/375 (58%), Gaps = 25/375 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +   A +A K +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGAVAAYKRMGSDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +    + + ILG ++        G  VN + V +  DI  E Y+
Sbjct: 58  -------GGVKLVDNTEDTYQEAKNILGMSI-------KGLPVNQILVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  IDP IG+          SL   
Sbjct: 104 SFTIDRNTRSVILMMSASGGMDIEEVARQSPEKIIRYAIDPFIGLPDYLARRFAFSLFPH 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +E  G+       +   LYK F + D SL+E+NPL +   G L  +D+KI FDDNALYRH
Sbjct: 164 IEQAGRM----AAILQALYKIFMENDASLVEVNPLALTAKGILMAIDAKIVFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+  L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKL+GG PANF
Sbjct: 220 PDVLSLFDPTEEEKVEADAKNKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLHGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  KV  A K++  D  VK +LINIFGGI RCD +  G++ A  ++K +IP++
Sbjct: 280 LDIGGSSNPVKVVEAMKLLLQDEKVKVVLINIFGGITRCDDVAIGLIQAFDQIKSDIPVI 339

Query: 357 MRLEGANVDIGNRLI 371
           +RL G N  +G  L+
Sbjct: 340 VRLTGTNEHLGRDLL 354


>gi|327289465|ref|XP_003229445.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 460

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 160/392 (40%), Positives = 234/392 (59%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  +PV  G++  +   A +  + +     VVK+Q+  GGR  G F+
Sbjct: 51  LSLHEYLSMKLLKEEGIPVPYGLLARTPEEAYTVARKIGTDDLVVKAQVLTGGRQNGVFE 110

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV+V  S +        ++G  L T+QTG  G   N V + +   + RE Y 
Sbjct: 111 ---GGLRGGVQVVCSPEEAREVASRMIGKRLFTQQTGKMGRICNQVLICERKYLRREYYF 167

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S+QGG+ IE+VA + P  I K  +D + G+T E    L   +   
Sbjct: 168 AITMERAFQGPVLIGSSQGGVRIEDVAAENPGAIIKQPVDIMEGITEEQAVQLAQKMGFP 227

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  D    +Y  F   D+ LLEINPL+    G +  +D+KI FD N+ +R   I 
Sbjct: 228 HHLLYEVADNMIKIYNFFIKYDVILLEINPLVEDSTGHVMCMDAKIIFDSNSAFRQQKIF 287

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL+D ++ D R+ EA    L+YIALDGNIGC+VNGAGLAMATMDIIKL+GG PAN+L+VG
Sbjct: 288 ELQDWTQLDERDREAANAELNYIALDGNIGCLVNGAGLAMATMDIIKLHGGTPANYLNVG 347

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+ITS+  V+ IL+NIFGG+MRCDV+  GI+ + K++ + IP+V+RL+
Sbjct: 348 GSATVEQVTEAFKLITSNEKVQAILVNIFGGLMRCDVIAHGIIMSAKDLDLKIPIVVRLQ 407

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G  V     LIAESGL ++   DLD AA+  V
Sbjct: 408 GTRVKDAKNLIAESGLKILPCDDLDQAAKMAV 439


>gi|315607959|ref|ZP_07882952.1| succinyl-CoA ligase subunit beta [Prevotella buccae ATCC 33574]
 gi|315250428|gb|EFU30424.1| succinyl-CoA ligase subunit beta [Prevotella buccae ATCC 33574]
          Length = 377

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 175/400 (43%), Positives = 239/400 (59%), Gaps = 27/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV   ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGFFASYGLPVDNSILCFTPDEAVAAYKKLGVERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V      IL   +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLAGSETEVRVCAEAILRMNI-------KGFTVDRVLVGEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDM 176
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP IG+      E    L D 
Sbjct: 104 SIVIDRKSKTAILMLSREGGMDIEAVAKETPEKIFKIAIDPTIGLADFKAREAALKLFDD 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    QA      LF  LY+ F +KD SL EINPL+ +K+G L+ +D+K++FDDNALYRH
Sbjct: 164 MAQVKQAI----PLFQKLYQLFVEKDASLAEINPLVKLKDGSLKAIDAKMTFDDNALYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI  + + +EE+ +E EAK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PDISAMFEPTEEEKKEHEAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++  K+  A K++ +D  VK +LINIFGGI RCD + KG++ A KE+K ++P+V
Sbjct: 280 LDIGGSSNPQKIVEAMKLLLADKHVKVVLINIFGGITRCDDVAKGLIEAFKEIKTDMPIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G  L+  +  +V  A  + +A +K V   K
Sbjct: 340 IRLTGTNEAEGRELLKGTAFHV--AATMSEAGRKAVELAK 377


>gi|311269133|ref|XP_003132357.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Sus scrofa]
          Length = 395

 Score =  292 bits (747), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 157/352 (44%), Positives = 218/352 (61%), Gaps = 3/352 (0%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K+QI AGGRGKG F    +  KGGV +    + V    ++++G  L TKQT   G +V
Sbjct: 44  VLKAQILAGGRGKGVFS---SGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKV 100

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
           N V V +  DI RE YL++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + 
Sbjct: 101 NKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIE 160

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+       + + L   G  +    D    LY  F   D + +E+NP      G++   D
Sbjct: 161 GIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFD 220

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +KI+FDDNA +R  DI  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT 
Sbjct: 221 AKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATC 280

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI 
Sbjct: 281 DIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGIT 340

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            A +E+++ +PLV+RLEG NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 341 KACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 392


>gi|3821929|gb|AAC69706.1| GTP-specific succinyl-CoA synthetase beta subunit [Columba livia]
          Length = 391

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 162/382 (42%), Positives = 226/382 (59%), Gaps = 3/382 (0%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ+K ++  + V V +  V  S + A  A + L     V+K+QI AGGRGKG F    +
Sbjct: 1   EYQSKKIMADHGVTVQRFFVADSANDALEAAQRLKAKEIVLKAQILAGGRGKGVFN---S 57

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             KGGV +    K V    ++++G  L TKQT   G  V  V V +  +I RE Y ++L+
Sbjct: 58  GLKGGVHLTKDPKIVEQLAKQMIGYNLSTKQTPKDGVTVKKVMVAEALNISRETYFAILM 117

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR       + S QGG+DIEEVA   P+ IFK  ID   G+       +   L  +G  +
Sbjct: 118 DRACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGIKDHQALQMAKNLGFKGPLQ 177

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I  + D
Sbjct: 178 QQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDD 237

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
            SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  
Sbjct: 238 KSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLGGGVK 297

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
           + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV
Sbjct: 298 EAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPLVVRLEGTNV 357

Query: 365 DIGNRLIAESGLNVITAIDLDD 386
               R++ ESGL +++A DL+D
Sbjct: 358 HEAQRILNESGLPIMSANDLED 379


>gi|237803253|ref|YP_002888447.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           B/Jali20/OT]
 gi|231274487|emb|CAX11283.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 386

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 159/393 (40%), Positives = 234/393 (59%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      +N V +    +I  E YL
Sbjct: 57  ------NGGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMDIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGMDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NVD G  +I  +G+       + + A+  V 
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELAVQ 383


>gi|317419039|emb|CBN81077.1| 'Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial'
           [Dicentrarchus labrax]
          Length = 383

 Score =  291 bits (746), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 163/377 (43%), Positives = 222/377 (58%), Gaps = 7/377 (1%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS--KGG 69
           +++  V V +  V  +   A  A K L     V+K+QI AGGRGKG F     DS  KGG
Sbjct: 1   MQESGVAVQRFYVADTASEALDAAKRLNAKEIVLKAQILAGGRGKGVF-----DSGLKGG 55

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V +      V     ++LG  L TKQT   G +V  V V +  DI RE Y ++L+DR+  
Sbjct: 56  VHLTKDPAVVGELANKMLGYNLTTKQTPKDGVKVKTVMVAEALDISRETYFAILMDRSCN 115

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               + S QGGMDIEEVA   P+ IFK +ID   GV  +    +   L  +G  +    D
Sbjct: 116 GPVMVGSPQGGMDIEEVAASTPELIFKEVIDIFQGVQDDQALRMAANLGFKGPLQRQAAD 175

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
               LY  F   D + +E+NPL     G++   D+KI+FDDNA +R   +  + D++E D
Sbjct: 176 QIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVFAMDDMTESD 235

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
             E EA + +L YI LDGNI C VNGAGLAMAT DII L+GG PANFLD+GGG  + +V 
Sbjct: 236 PTETEAAKWDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKERQVY 295

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    R
Sbjct: 296 EAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAKR 355

Query: 370 LIAESGLNVITAIDLDD 386
           ++ ESGL +  A +LDD
Sbjct: 356 ILTESGLPITAAENLDD 372


>gi|74191221|dbj|BAE39440.1| unnamed protein product [Mus musculus]
          Length = 384

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 161/375 (42%), Positives = 223/375 (59%), Gaps = 3/375 (0%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F    +  KGGV 
Sbjct: 1   MSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN---SGLKGGVH 57

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+    
Sbjct: 58  LTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGP 117

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +    D  
Sbjct: 118 VIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQI 177

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  
Sbjct: 178 TKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPI 237

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  A
Sbjct: 238 ENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYEA 297

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV     ++
Sbjct: 298 FKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQNIL 357

Query: 372 AESGLNVITAIDLDD 386
             SGL + +A+DL+D
Sbjct: 358 KSSGLPITSAVDLED 372


>gi|237805174|ref|YP_002889328.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231273474|emb|CAX10390.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis
           B/TZ1A828/OT]
          Length = 386

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/393 (40%), Positives = 234/393 (59%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  SL+ +++   ++L     + QT      V+ V +    +I  E YL
Sbjct: 57  ------NGGVVIAHSLEDLLAAADKLLHMQFSSNQTAGLSLPVDKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMGTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NVD G  +I  +G+       + + A+  V 
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELTVQ 383


>gi|329943126|ref|ZP_08291900.1| succinyl-CoA ligase [ADP-forming] subunit beta [Chlamydophila
           psittaci Cal10]
 gi|332287709|ref|YP_004422610.1| succinyl-CoA synthetase subunit beta [Chlamydophila psittaci 6BC]
 gi|313848283|emb|CBY17284.1| succinyl-CoA synthetase beta chain [Chlamydophila psittaci RD1]
 gi|325507263|gb|ADZ18901.1| succinyl-CoA synthetase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814673|gb|EGF84663.1| succinyl-CoA ligase [ADP-forming] subunit beta [Chlamydophila
           psittaci Cal10]
 gi|328914962|gb|AEB55795.1| succinyl-CoA synthase, beta subunit [Chlamydophila psittaci 6BC]
          Length = 386

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/389 (40%), Positives = 233/389 (59%), Gaps = 10/389 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  YN+ +    V SSV      +  L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLASYNIAIPPYRVASSVEEGRHTLNELGISAGVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   +++ + ++L     + QT      V  V +    +I  E YL
Sbjct: 57  ------NGGVIVAKSPDEILAAVDKLLRMRFTSNQTSGEALPVEKVLITPLVNIATEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +   A + S  GG+DIEEVA+ YP ++  + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPAIMLSRAGGVDIEEVAQKYPDQLLTIPLTPFARIYNYQLRQMIKFMGWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L  +L + F D D SLLEINPL++ + G L VLD+K++ DDNALYRH  ++
Sbjct: 171 GDTGKQGVQLIKSLVQCFYDNDASLLEINPLVLTQEGDLLVLDAKVTIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIALDGNIGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQIQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NV++G  ++  SG+       L+  AQ
Sbjct: 351 GTNVELGKEIVQRSGIPCKFTDSLNTGAQ 379


>gi|166154165|ref|YP_001654283.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 434/Bu]
 gi|166155040|ref|YP_001653295.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335409|ref|ZP_07223653.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis L2tet1]
 gi|226734936|sp|B0B950|SUCC_CHLT2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734938|sp|B0BAS9|SUCC_CHLTB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|165930153|emb|CAP03637.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis 434/Bu]
 gi|165931028|emb|CAP06591.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 386

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/393 (40%), Positives = 235/393 (59%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVEAAIQAEQWKAGVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      VN V +    +I  E YL
Sbjct: 57  ------NGGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPVNKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH ++ 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NVD G  +I  +G+       + + A+  V 
Sbjct: 351 GTNVDKGKGMIINAGIPCEFVTSMSEGAELAVQ 383


>gi|168699854|ref|ZP_02732131.1| succinyl-CoA synthetase (beta subunit) [Gemmata obscuriglobus UQM
           2246]
          Length = 403

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/401 (41%), Positives = 227/401 (56%), Gaps = 9/401 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAGGRGKGRF 59
           M +HEYQAK LL      V K +V  +     +A   L  G   +VK+QIHAGGRG G+ 
Sbjct: 1   MKVHEYQAKELLAAAGANVPKHIVCKTPDEVAAAFDKLANGGGVMVKAQIHAGGRGAGQL 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
               AD  GGV+  +S +   +    +L   L T QTGP G  +  + V+  A+  +E Y
Sbjct: 61  VGY-ADKLGGVKFCASKEKARAVAETMLKHPLKTLQTGPDGQPIRTLIVQADAEPAQEFY 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           ++++ DR  G    +AS  GGMDIE+VA D P+ IFK+   P  G+           L L
Sbjct: 120 VAVVFDRAIGQPILMASAAGGMDIEKVAHDTPELIFKVPFAPETGLEPAQAKETAAKLGL 179

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   L K +  KD +L E+NPL + K G + VLD+K  FDDNAL+RH D+
Sbjct: 180 AGEQAAKAEQIMLALSKVYLAKDATLAEVNPLAVTKAGDVVVLDAKFDFDDNALFRHPDV 239

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PAN 295
             LRD SEE+  EI A + NL++I LDG + C+VNGAGLAMATMDII  +G A    PAN
Sbjct: 240 AALRDESEENPAEIRAGKANLNFIQLDGTVACLVNGAGLAMATMDIINYHGKAHGVGPAN 299

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGG        AF+II SD  VKGIL+N+FGGI  C  +   ++ A KEV   +P+
Sbjct: 300 FLDVGGGVTAAGAVEAFRIILSDPKVKGILVNVFGGIASCATIADALVKAGKEVGFKVPV 359

Query: 356 VMRLEGANVDIGNRLIAESGLNVIT---AIDLDDAAQKIVH 393
           V+RLEG  V+    ++  +   + T   A DL  AA+ +V 
Sbjct: 360 VVRLEGNEVEKARGILTAAAAELPTLKAAPDLTSAAKLVVE 400


>gi|332826622|gb|EGJ99451.1| succinyl-CoA ligase subunit beta [Dysgonomonas gadei ATCC BAA-286]
          Length = 384

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 163/382 (42%), Positives = 227/382 (59%), Gaps = 25/382 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L   Y +PV K V+ +  + A +A   L     VVK+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKNLFSSYGIPVEKYVLCNVANEAVTAYDGLNMERVVVKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V     +ILG ++   +  P    V  + V +  +I  E Y+
Sbjct: 58  -------GGVKLAKNREDVKQYATDILGMSI---KEFP----VTKIIVSEAVNIGSEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S ++DR +  V  + S +GGMDIEEVA+  P+KI K  IDP IGV          ++ + 
Sbjct: 104 SFVIDRNTKSVILMMSAEGGMDIEEVAEHSPEKIHKFAIDPFIGVPDYLARRFAFTIFEE 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +    Q  +    +   LYK F DKD SL EINPL++ K G L  +D+K++FDDNALYR 
Sbjct: 164 INQVNQLAV----ILQKLYKLFVDKDASLAEINPLVLTKEGNLIAIDAKMTFDDNALYRQ 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             I  L + +EE+  E  AK+   SY+ LDG IGCMVNGAGLAMATMD+IKLYGG PANF
Sbjct: 220 PQIHALFEPTEEEKTEAYAKEKGFSYVHLDGEIGCMVNGAGLAMATMDMIKLYGGTPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GG ++ +KV  A  ++  D  VK +LINIFGGI RCD +  G+L+A +++K +IP++
Sbjct: 280 LDIGGSSNPNKVIDAMTLLLKDPKVKVVLINIFGGITRCDDVASGLLTAFEQLKTDIPVI 339

Query: 357 MRLEGANVDIGNRLIAESGLNV 378
           +RL G N   G  ++A +   V
Sbjct: 340 VRLTGTNEKQGRDMLAGTRFKV 361


>gi|15605556|ref|NP_220342.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76789566|ref|YP_328652.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           A/HAR-13]
 gi|255349225|ref|ZP_05381232.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 70]
 gi|255503762|ref|ZP_05382152.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 70s]
 gi|255507443|ref|ZP_05383082.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           D(s)2923]
 gi|21264031|sp|O84828|SUCC_CHLTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123606558|sp|Q3KKL8|SUCC_CHLTA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|3329290|gb|AAC68418.1| Succinyl-CoA Synthetase, Beta [Chlamydia trachomatis D/UW-3/CX]
 gi|76168096|gb|AAX51104.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis A/HAR-13]
 gi|289525867|emb|CBJ15349.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis Sweden2]
 gi|296435452|gb|ADH17630.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis E/150]
 gi|296436376|gb|ADH18550.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis G/9768]
 gi|296437307|gb|ADH19477.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           G/11222]
 gi|296438235|gb|ADH20396.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           G/11074]
 gi|296439169|gb|ADH21322.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           E/11023]
 gi|297140736|gb|ADH97494.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis G/9301]
 gi|297748950|gb|ADI51496.1| Succinyl-CoA synthetase beta chain [Chlamydia trachomatis D-EC]
 gi|297749830|gb|ADI52508.1| Succinyl-CoA synthetase beta chain [Chlamydia trachomatis D-LC]
          Length = 386

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 158/393 (40%), Positives = 234/393 (59%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      +N V +    +I  E YL
Sbjct: 57  ------NGGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NVD G  +I  +G+       + + A+  V 
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELAVQ 383


>gi|255311661|ref|ZP_05354231.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 6276]
 gi|255317962|ref|ZP_05359208.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 6276s]
          Length = 386

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/393 (40%), Positives = 234/393 (59%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      +N V +    +I  E YL
Sbjct: 57  ------NGGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLPLPINKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NVD G  +I  +G+       + + A+  V 
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELAVQ 383


>gi|28422556|gb|AAH47024.1| Succinate-CoA ligase, GDP-forming, beta subunit [Homo sapiens]
 gi|133777003|gb|AAH07716.3| Succinate-CoA ligase, GDP-forming, beta subunit [Homo sapiens]
          Length = 384

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 160/370 (43%), Positives = 220/370 (59%), Gaps = 3/370 (0%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           V V +  V  + + A  A K L     V+K+QI AGGRGKG F    +  KGGV +    
Sbjct: 6   VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN---SGLKGGVHLTKDP 62

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
             V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S
Sbjct: 63  NVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGS 122

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYK 196
            QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +    D    LY 
Sbjct: 123 PQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYN 182

Query: 197 AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAK 256
            F   D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA 
Sbjct: 183 LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAA 242

Query: 257 QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIIT 316
           +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T
Sbjct: 243 KYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLT 302

Query: 317 SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           +D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL
Sbjct: 303 ADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGL 362

Query: 377 NVITAIDLDD 386
            + +AIDL+D
Sbjct: 363 PITSAIDLED 372


>gi|153806391|ref|ZP_01959059.1| hypothetical protein BACCAC_00654 [Bacteroides caccae ATCC 43185]
 gi|149131068|gb|EDM22274.1| hypothetical protein BACCAC_00654 [Bacteroides caccae ATCC 43185]
          Length = 376

 Score =  288 bits (738), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 152/371 (40%), Positives = 220/371 (59%), Gaps = 17/371 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A +++     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVVAAYRSVGADRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN + V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQILVSEAVDITAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIE+VA+  P+KI +  I+P IG+           L  +
Sbjct: 104 SFTIDRNTRSVILMMSASGGMDIEQVARQTPEKIIRYSINPFIGIPDYLARHFAFSLFPK 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+EINPL +   G L  +D+KI FDDNAL RH +I 
Sbjct: 164 TEQASKMAVILQALYKIFMENDASLVEINPLALTTKGMLIAIDAKIVFDDNALCRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK+   SY+ +DGNIGCMVNGAGLAMATMD+IK+YGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKERGFSYVRMDGNIGCMVNGAGLAMATMDMIKIYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G++ + +++K  IP+++RL 
Sbjct: 284 GSSNPIKVVEAMKLLLQDEKVKVVLINIFGGITRCDDVAIGLIQSFEQIKSEIPIIVRLT 343

Query: 361 GANVDIGNRLI 371
           G N +IG  L+
Sbjct: 344 GTNENIGRDLL 354


>gi|32484342|gb|AAH54425.1| Suclg2 protein [Mus musculus]
          Length = 374

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 159/363 (43%), Positives = 217/363 (59%), Gaps = 3/363 (0%)

Query: 24  VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI 83
           V ++   A  A K L     V+K+QI AGGRGKG F    +  KGGV +    K V    
Sbjct: 3   VANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFN---SGLKGGVHLTKDPKVVGELA 59

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DI
Sbjct: 60  QQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDI 119

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           EEVA   P+ IFK  ID   G+       + + L   G  +    D    LY  F   D 
Sbjct: 120 EEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDA 179

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI
Sbjct: 180 TQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAARYDLKYI 239

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++TSD  V+ 
Sbjct: 240 GLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEA 299

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV     ++  SGL + +A+D
Sbjct: 300 ILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVD 359

Query: 384 LDD 386
           L+D
Sbjct: 360 LED 362


>gi|156848382|ref|XP_001647073.1| hypothetical protein Kpol_1050p74 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117756|gb|EDO19215.1| hypothetical protein Kpol_1050p74 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 434

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 166/413 (40%), Positives = 242/413 (58%), Gaps = 24/413 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-----YVVKSQIHAGGRG 55
           ++I+E+++  LL +Y V    G V  +   A     +L   L      VVK+Q   GGRG
Sbjct: 20  LSINEFRSAQLLNEYGVNTPAGAVAWTPQQASQVSASLFDKLGRDAQLVVKAQALTGGRG 79

Query: 56  KGRFKE-LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           KG F    P     G+++  S +       ++LG  LITKQ+G  G  VN VY+ +   +
Sbjct: 80  KGHFDNGFPT----GIQMVDSQQQATETASQMLGHRLITKQSGEKGKLVNAVYIVERKKV 135

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           LRE YLS+L+DR       I   +GGM+IEEVA+  P+KI K  IDP  GVT E    + 
Sbjct: 136 LREAYLSILMDRAERKPLIIVCEEGGMNIEEVAERSPEKIKKFHIDPSKGVTDEIATGVA 195

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR----VLDSKISFDD 230
             L    +   D  D    LYK + + D + +EINPL  ++    +     +D+K  FDD
Sbjct: 196 KGLGFSQEVLEDAKDQVKRLYKIYDNTDATQIEINPLSEVETAESKHGVMCMDAKFGFDD 255

Query: 231 NALYRHLDIQELRDVSEEDSRE---IEAKQ-HNLSYIALDGNIGCMVNGAGLAMATMDII 286
           NA YR   I   R+  EE   E    EAK+ ++L+++ L+GNIGC+VNGAGLAMATMD+I
Sbjct: 256 NASYRQERIYSWRNDVEESPEEKFSTEAKRDYDLNFVKLNGNIGCLVNGAGLAMATMDVI 315

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGIMRCDVLVKG 341
           +LYGG PANFLD GGGA    +  AF++I     TS + +  I +NIFGGI+RCD + +G
Sbjct: 316 QLYGGKPANFLDCGGGATPQTIKKAFELIVDSSKTSATPLDAIFVNIFGGIVRCDFVAQG 375

Query: 342 ILSAVKEVKI-NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           I+ A+K++ + ++P+V+RL+G N+D G  ++  SG+N++   +LD AA+K+V 
Sbjct: 376 IVDAIKDLNLKDLPIVVRLQGTNLDEGREIVKSSGVNILAFDELDPAAEKVVE 428


>gi|218884352|ref|YP_002428734.1| succinyl-CoA synthetase, beta subunit [Desulfurococcus
           kamchatkensis 1221n]
 gi|254778437|sp|B8D5I6|SUCC_DESK1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218765968|gb|ACL11367.1| succinyl-CoA synthetase, beta subunit [Desulfurococcus
           kamchatkensis 1221n]
          Length = 379

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 160/400 (40%), Positives = 236/400 (59%), Gaps = 24/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K + RKY +   +G++ +SV   + A + L     V+KSQ+  GGRG     
Sbjct: 1   MKLYEYEGKEIARKYGIETPRGILATSVEDVDKAYRELNTGTVVLKSQVLVGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  S+L+  ++  RE+   ++        G RV  + VE+   I RELY+
Sbjct: 58  -------GGVKKASNLEEALTKARELFSMSI-------KGERVEKILVEEAVCISRELYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL VDR +  + ++AS  GG++IEE+A+ +P KI ++ +DP IG +          L LQ
Sbjct: 104 SLTVDRATRKLVYLASGMGGVEIEELARKHPDKILRIPVDPFIGYSGYMARHALGFLGLQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   +YK   D D  L+E NPL    +GRL  LD+KI  DDN+LYRH D+Q
Sbjct: 164 WDKLGQLDNIMRAMYKIMIDYDAELVEFNPLAYTCDGRLTALDAKIIIDDNSLYRHPDLQ 223

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            L  RD +     E  AKQ + +Y+ LDG+IG + NGAGL MATMD I  YGG PANFLD
Sbjct: 224 PLYGRDAT---PYEKVAKQLDFNYVELDGDIGVISNGAGLTMATMDSILHYGGRPANFLD 280

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA +++V  A KI+ +   VK +L+NIFGGI RCD +  GI+ A+ E K+  P+V+R
Sbjct: 281 IGGGATRERVREAVKIVVTHPRVKAVLVNIFGGITRCDEVASGIVEALSETKVAKPIVVR 340

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           + G N + G R++ E G+ V T  ++D+A  +I+  V+GV
Sbjct: 341 MLGTNEEEGRRILIEHGITVYT--EMDEAVLRIIQLVRGV 378


>gi|312096708|ref|XP_003148752.1| succinate-CoA ligase [Loa loa]
 gi|307756083|gb|EFO15317.1| succinate-CoA ligase [Loa loa]
          Length = 382

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/362 (42%), Positives = 230/362 (63%), Gaps = 4/362 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+Q  +LL++ ++PVA   V  S     +  + + G   VVK+Q+  GGRGKG F+
Sbjct: 24  LSLKEHQGISLLKQADIPVAPFGVSRSADELYNEARKIGGKDLVVKAQVLTGGRGKGYFE 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S +        +LGS + TKQTG +G   + V +       RE Y 
Sbjct: 84  ---SGLEGGVQLVFSPEEAREKASMMLGSKIFTKQTGASGKLCDEVMICKRLFTRREFYF 140

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +G    I S++GG++IEEVA   P+ I K  ID   G+   + +S+ D +  +
Sbjct: 141 SITMDRHTGGPVAIGSSKGGVNIEEVAAKDPKAIVKCPIDIFDGMKDAEASSIADRMGFK 200

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +I   ++F  LY  F   D +L+EINP+    NG+L  LD K++ D NA YR  ++ 
Sbjct: 201 DDLKIQAANIFKKLYNLFIKYDATLIEINPMAEDINGKLYCLDCKLNIDSNASYRQAELF 260

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D  ++D  E  A + +L+YI LDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 261 AMEDKQQQDPLESRAAKADLNYIRLDGNIGCMVNGAGLAMATMDIIKLHGGDPANFLDVG 320

Query: 301 GGADQDKVAAAFKIITSDS-SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGA  ++VA AF+IIT+D   V  IL+NIFGGIMRCDV+ +G+++A+ E+++ +P+V+RL
Sbjct: 321 GGATAEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIAQGMITAISELQLKVPVVVRL 380

Query: 360 EG 361
           +G
Sbjct: 381 QG 382


>gi|253565538|ref|ZP_04842993.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 3_2_5]
 gi|251945817|gb|EES86224.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 3_2_5]
          Length = 382

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 231/396 (58%), Gaps = 18/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y +PV +  +  +   A +A   +      +K+Q+  GGRGK    
Sbjct: 1   MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V    + IL  T+        G  V  + + +  +I  E Y+
Sbjct: 58  -------GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILLSEAVNIAAEYYI 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  I S  GGMDIEEVA+  P+KI +  IDPLIGV           L  Q
Sbjct: 104 SFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LYKAF +KD SL EINPL++   G L  +D+K+ FDDNALYRH D+Q
Sbjct: 164 AEQANQMATIIQDLYKAFIEKDASLAEINPLVLTPVGTLLAIDAKMVFDDNALYRHPDLQ 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L + +E++  E  AK+   SY+ +DG IGCMVNGAGLAM TMD+IKLYGG PANFLD+G
Sbjct: 224 KLSEPTEDEKLEAIAKERGFSYVRMDGEIGCMVNGAGLAMTTMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A +++  D  VK + INIFGGI RCD +  G+L A ++++ +IP+++RL 
Sbjct: 284 GSSNPVKVIEAMRLLLDDKKVKVVFINIFGGITRCDDVAIGLLQAFEQIQTDIPIIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  L+ ++      A  +++A +  + ++K
Sbjct: 344 GTNGNMGRELLRKNN-RFQVAQTMEEATKMAIESLK 378


>gi|62185364|ref|YP_220149.1| succinyl-CoA synthetase subunit beta [Chlamydophila abortus S26/3]
 gi|81312485|sp|Q5L593|SUCC_CHLAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|62148431|emb|CAH64199.1| succinyl-CoA synthetase beta chain [Chlamydophila abortus S26/3]
          Length = 386

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/389 (40%), Positives = 232/389 (59%), Gaps = 10/389 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V SSV      +  L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTSYAIPMPPYRVASSVEEGRHTLNELGINAGVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S + +++ + ++L    ++ QT      V  V +    +I  E YL
Sbjct: 57  ------NGGVIVAKSPEEILAAVDQLLHMRFVSNQTSGEALPVEKVLITPLVNIAAEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +     + S  GG+DIEEVA+ YP +   + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPTIMLSKAGGVDIEEVAQKYPDQQLTISLTPFARLYNYQLRQMIKFMGWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  +  NL + F D D SLLEINPL+  + G L VLD+K++ DDNALYRH  ++
Sbjct: 171 GDTGKQGVQMIKNLVQCFYDNDASLLEINPLVRTQEGDLLVLDAKVTIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIALDGNIGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQIQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NV++G  ++  SG+       L+  AQ
Sbjct: 351 GTNVELGKEIVQCSGIPCKFTDSLNTGAQ 379


>gi|268578207|ref|XP_002644086.1| Hypothetical protein CBG17559 [Caenorhabditis briggsae]
 gi|187025712|emb|CAP35184.1| hypothetical protein CBG_17559 [Caenorhabditis briggsae AF16]
          Length = 435

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/391 (41%), Positives = 230/391 (58%), Gaps = 4/391 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    +L+ Y + V    V      A +  K + G  YVVK+Q+ AGGRGKGRF   
Sbjct: 26  LHEHHGMKILQDYEIKVPPFGVAQDATTALNEAKRIGGKDYVVKAQVLAGGRGKGRFS-- 83

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +  +GGV++  + + V      ++G+ LITKQT   G +   V V       RE Y S+
Sbjct: 84  -SGLQGGVQIVFTPEEVKQKAEMMIGAHLITKQTDHRGKKCEEVMVCKRLFTRREYYFSI 142

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +DR +     IAS+QGG++IEEVA   P  I K+ ID  +G+T E    +   +     
Sbjct: 143 TLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKD 202

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
                 ++   LYK F   D +L+EINP+    NG +  +D K+  D NA +R   + +L
Sbjct: 203 CEQQASEIIEKLYKMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFRQAKLFDL 262

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D  +ED  E+        Y  +D N+GCMVNGAGLAMATMDIIKL+GG PANFLDVGGG
Sbjct: 263 KDKKQEDELEVIYDLLTGKYTTIDFNVGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGG 322

Query: 303 ADQDKVAAAFKIITSDS-SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           A  ++V  AFKIIT+D   V  IL+NIFGGIMRCDV+ +GI+ A +E+ + IP+V+RL+G
Sbjct: 323 ATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIPIVVRLQG 382

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
             V+    LIA S L ++   +LD+AA+ +V
Sbjct: 383 TKVEDAKALIATSQLRILPCDNLDEAAKMVV 413


>gi|53713546|ref|YP_099538.1| succinyl-CoA synthetase subunit beta [Bacteroides fragilis YCH46]
 gi|60681831|ref|YP_211975.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis NCTC 9343]
 gi|255009309|ref|ZP_05281435.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis 3_1_12]
 gi|265763871|ref|ZP_06092439.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_16]
 gi|313147062|ref|ZP_07809255.1| succinyl-CoA synthetase subunit beta [Bacteroides fragilis 3_1_12]
 gi|81315104|sp|Q5LCW4|SUCC_BACFN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81382505|sp|Q64U25|SUCC_BACFR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52216411|dbj|BAD49004.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis YCH46]
 gi|60493265|emb|CAH08049.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis NCTC 9343]
 gi|263256479|gb|EEZ27825.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_16]
 gi|301163323|emb|CBW22873.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis 638R]
 gi|313135829|gb|EFR53189.1| succinyl-CoA synthetase subunit beta [Bacteroides fragilis 3_1_12]
          Length = 382

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 231/396 (58%), Gaps = 18/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y +PV +  +  +   A +A   +      +K+Q+  GGRGK    
Sbjct: 1   MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V    + IL  T+        G  V  + + +  +I  E Y+
Sbjct: 58  -------GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILLSEAVNIAAEYYI 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  I S  GGMDIEEVA+  P+KI +  IDPLIGV           L  Q
Sbjct: 104 SFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LYKAF +KD SL EINPL++   G L  +D+K+ FDDNALYRH D+Q
Sbjct: 164 AEQANRMATIIQDLYKAFIEKDASLAEINPLVLTPVGTLLAIDAKMVFDDNALYRHPDLQ 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L + +E++  E  AK+   SY+ +DG IGCMVNGAGLAM TMD+IKLYGG PANFLD+G
Sbjct: 224 KLSEPTEDEKLEAIAKERGFSYVRMDGEIGCMVNGAGLAMTTMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A +++  D  VK + INIFGGI RCD +  G+L A ++++ +IP+++RL 
Sbjct: 284 GSSNPVKVIEAMRLLLDDKKVKVVFINIFGGITRCDDVAIGLLQAFEQIQTDIPIIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  L+ ++      A  +++A +  + ++K
Sbjct: 344 GTNGNMGRELLRKNN-RFQVAQTMEEATKMAIESLK 378


>gi|281350903|gb|EFB26487.1| hypothetical protein PANDA_020149 [Ailuropoda melanoleuca]
          Length = 367

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 156/361 (43%), Positives = 217/361 (60%), Gaps = 3/361 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  +   A  A K L    +V+K+QI AGGRGKG F 
Sbjct: 10  LNLQEYQSKKLMSDHGVRVQRFFVADTAKEALEAAKKLNAKEFVLKAQILAGGRGKGVFS 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 70  ---SGLKGGVHLTKDPQVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 127 AILMDRSYNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIMEGIKDSQAQRMAENLGFL 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 187 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 247 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 307 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 366

Query: 361 G 361
           G
Sbjct: 367 G 367


>gi|332022241|gb|EGI62556.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Acromyrmex echinatior]
          Length = 403

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 168/389 (43%), Positives = 220/389 (56%), Gaps = 50/389 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYSLLNEAGVPTPKFGVAKTPDEAAKLAADLKTKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                S  GV++  + +   S   ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 98  ---GTSVSGVKMCETPEEAKSLAGQMLGKLLITKQTGEGGRICNAVMVTQRMFPRKEYYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E            
Sbjct: 155 AVMMERAFGGPVIIASSQGGVNIEEVAATNPSAIMYEPIDINKGITKEQAEHF------- 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                                                    LD K  FDDNA +R   + 
Sbjct: 208 ----------------------------------------ALDCKCRFDDNAEFRQKALF 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 228 NLRDWTQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 288 GGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD    LIA +GL ++   DLD+AA+
Sbjct: 348 GTNVDEAKALIANAGLKIVPIDDLDEAAR 376


>gi|89898036|ref|YP_515146.1| succinyl-CoA synthetase subunit beta [Chlamydophila felis Fe/C-56]
 gi|123483722|sp|Q255N7|SUCC_CHLFF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89331408|dbj|BAE81001.1| succinyl-CoA synthetase beta chain [Chlamydophila felis Fe/C-56]
          Length = 388

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 156/398 (39%), Positives = 238/398 (59%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y++ +    ++SSV   E  ++ L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLSSYDIAIPPYRIVSSVEEGELVLRELGINAGVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S   +++ I ++L     + QT      V  V +    +I  E YL
Sbjct: 57  ------NGGVIIAKSSSEILAAIGKLLKMRFESNQTSGESLPVEKVLITPLVNIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +   A + S  GGMDIEEVA+ YP ++  + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPAIMLSKAGGMDIEEVAQKYPDQLLTVPLTPSARIYNYQLRQIIKFMNWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L   L + F D D SLLEINPL++ +   L VLD+K++ DDNALYRH  ++
Sbjct: 171 GDTGKQGVQLIKKLVQCFYDNDASLLEINPLVLTQEEELLVLDAKVTIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AK+  LSYIALDG+IGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKKIGLSYIALDGDIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQIQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV++G  ++  SG+       L++ A+  V   K V
Sbjct: 351 GTNVELGKEIVQRSGIPCQFTDSLNEGARLAVALSKQV 388


>gi|108804115|ref|YP_644052.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rubrobacter
           xylanophilus DSM 9941]
 gi|123177407|sp|Q1AWI8|SUCC_RUBXD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|108765358|gb|ABG04240.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rubrobacter
           xylanophilus DSM 9941]
          Length = 383

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 161/397 (40%), Positives = 239/397 (60%), Gaps = 19/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+Q K LL ++ +    GVV ++   A  A + L G +  VK+Q+  GGRGK    
Sbjct: 1   MDLYEHQGKELLGRFGLRTLPGVVATTPEEARRAAERLGGTV-AVKAQVLTGGRGK---- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  S +      R ILG  +        G  V  + +E GADI RELYL
Sbjct: 56  ------AGGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLIESGADIERELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S     + ST+GG+DIEEVA+  P  I +L +DPL+G+    V  L     L 
Sbjct: 103 SAMVDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGLLPYQVRELTFASGLS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   D G    NLY+AF   D SL+EINPL++   G +  LD+K++ D+++LYRH +I 
Sbjct: 163 GETAKDFGRAVQNLYEAFRGIDASLVEINPLVVTGEGEVVALDAKVTVDNSSLYRHQEIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RDV   D +E  A++  L Y+ LDG++G + NGAGL M+T+D++   GG PANF DVG
Sbjct: 223 GWRDVEAADPQEHRAQEVGLQYVKLDGDVGILGNGAGLVMSTLDVVAQAGGRPANFCDVG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +K+A A +I+ S+ +V+ +  NIFGGI R D + +G+L+A+++  I++P+V+RL+
Sbjct: 283 GGADAEKIATALEIVASNENVRSVFFNIFGGITRGDEVARGLLAAIRKTGIDLPVVVRLD 342

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           G N + G RL+AE    NV T   + DAA++ V   +
Sbjct: 343 GTNAEEGLRLLAEGAPENVHTEETMLDAARRAVELAR 379


>gi|15834828|ref|NP_296587.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum Nigg]
 gi|270284994|ref|ZP_06194388.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum Nigg]
 gi|270289017|ref|ZP_06195319.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum Weiss]
 gi|301336391|ref|ZP_07224593.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum
           MopnTet14]
 gi|21264060|sp|Q9PL99|SUCC_CHLMU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|7190245|gb|AAF39080.1| succinyl-CoA synthetase, beta subunit [Chlamydia muridarum Nigg]
          Length = 386

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 156/376 (41%), Positives = 228/376 (60%), Gaps = 10/376 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +S+  AE AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTSYQLPIPPYHVATSLSEAEVAIQAEQWRSGVVKAQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S + +++    +L     + QT      VN V +    +I  E Y+
Sbjct: 57  ------NGGVIVARSPEDLLAATDRLLHMQFSSNQTAGLSLPVNKVLISPLVEIALEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEE+A+  P  + K+ +     + +  +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKSGGIDIEEIAEKQPDLLLKIALPSSGKIYAYQLRHIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F D D SLLEINPL++ K+G L +LD+KI+ DDNALYRH  + 
Sbjct: 171 KLVADRGNHIIRKLLQCFYDNDASLLEINPLVLTKDGDLIILDAKITIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DWYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + I+IFGGIM C V+  G++SA++  + +IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKNVRVLFIHIFGGIMDCAVVASGLVSAMQGQQGSIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGL 376
           G NVD G  +I  SG+
Sbjct: 351 GTNVDKGKEIILRSGI 366


>gi|73909235|gb|AAH35149.1| SUCLG2 protein [Homo sapiens]
          Length = 362

 Score =  285 bits (730), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 156/353 (44%), Positives = 213/353 (60%), Gaps = 3/353 (0%)

Query: 34  AIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLIT 93
           A K L     V+K+QI AGGRGKG F    +  KGGV +      V    ++++G  L T
Sbjct: 1   AAKRLNAKEIVLKAQILAGGRGKGVFN---SGLKGGVHLTKDPNVVGQLAKQMIGYNLAT 57

Query: 94  KQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
           KQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DIEEVA   P+ 
Sbjct: 58  KQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPEL 117

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
           IFK  ID   G+       + + L   G  +    D    LY  F   D + +E+NP   
Sbjct: 118 IFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGE 177

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV 273
              G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI LDGNI C V
Sbjct: 178 TPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFV 237

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ IL+NIFGGI+
Sbjct: 238 NGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIV 297

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +AIDL+D
Sbjct: 298 NCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 350


>gi|28175163|gb|AAH43312.1| Suclg2 protein [Mus musculus]
          Length = 355

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/343 (44%), Positives = 210/343 (61%), Gaps = 3/343 (0%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K+QI AGGRGKG F    +  KGGV +    K V    ++++G  L TKQT   G +V
Sbjct: 4   VLKAQILAGGRGKGVFN---SGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKV 60

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
           N V V +  DI RE YL++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   
Sbjct: 61  NKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFE 120

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+       + + L   G  +    D    LY  F   D + +E+NP      G++   D
Sbjct: 121 GIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFD 180

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +KI+FDDNA +R  DI  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT 
Sbjct: 181 AKINFDDNAEFRQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATC 240

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DII L GG PANFLD+GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI 
Sbjct: 241 DIIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGIT 300

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            A +E+++ +PLV+RLEG NV     ++  SGL + +A+DL+D
Sbjct: 301 KACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 343


>gi|332261161|ref|XP_003279644.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial isoform 2 [Nomascus leucogenys]
          Length = 444

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/370 (42%), Positives = 219/370 (59%), Gaps = 3/370 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRL 370
           G  ++ G+ +
Sbjct: 395 GTFMEKGSYM 404


>gi|316976921|gb|EFV60115.1| succinyl-CoA synthetase beta chain [Trichinella spiralis]
          Length = 470

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/395 (37%), Positives = 240/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EY +K LL  + + V K +V+ +   A   ++      YVVK+QI AGGRGKG+F 
Sbjct: 66  LHLQEYHSKQLLDNFGLTVQKFIVVEAAEEAAVRLQKFVANEYVVKAQILAGGRGKGKFD 125

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++  S K  I  +++++   L T QT   G  V  V + +   I RE YL
Sbjct: 126 N---GLEGGVKLARSPKQAIEYVKKMVNHRLFTNQTSSDGILVKKVMIAESVPIWREGYL 182

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++VDRT      IAS  GG+DIEEV+   P+ + KL ID  +G++      +   L+  
Sbjct: 183 AIMVDRTLESPLIIASPSGGVDIEEVSVKSPELMLKLPIDLEVGLSPAVALKIAKFLQFS 242

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     D   +LY+ F   D +++E+NP+    N  + ++D+K+ FDDNA +R  +I 
Sbjct: 243 ENATEKAKDEILHLYEMFVRTDATMIEVNPICETTNSDVYLVDAKLHFDDNASFRQREIF 302

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L ++S+ D RE EA+ + L+++++DGNIGC+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 303 ALTNLSDRDPRENEAESYGLNFVSMDGNIGCLVNGAGLAMATMDLIKLHGGEPANFLDVG 362

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  +V+   +II+ D  VK I +NIFGGI+ C  + +G+++A++++   +P+++RLE
Sbjct: 363 GSADASQVSHGIEIISHDPKVKAIFVNIFGGIVNCQTIARGVIAAMEKIGSRLPIILRLE 422

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G +     RL+ ES   ++ A +++      + A+
Sbjct: 423 GTDDLTAKRLLRESHQTMLMANNMEHGVSLSIEAI 457


>gi|301788870|ref|XP_002929852.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like, partial [Ailuropoda melanoleuca]
          Length = 429

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 155/360 (43%), Positives = 216/360 (60%), Gaps = 3/360 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  +   A  A K L    +V+K+QI AGGRGKG F 
Sbjct: 73  LNLQEYQSKKLMSDHGVRVQRFFVADTAKEALEAAKKLNAKEFVLKAQILAGGRGKGVFS 132

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 133 ---SGLKGGVHLTKDPQVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 189

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 190 AILMDRSYNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIMEGIKDSQAQRMAENLGFL 249

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 250 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 309

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 310 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 369

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 370 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 429


>gi|329112627|gb|AEB72017.1| RH70213p [Drosophila melanogaster]
          Length = 312

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/312 (48%), Positives = 209/312 (66%), Gaps = 3/312 (0%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G+ LITKQT  +G  VN V V    +I RE YL +L+DR       IAS  GGMDIE 
Sbjct: 1   MIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEA 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA++ P+KI  + +D    +    +  +   LE +G +     +    LY  F   D   
Sbjct: 61  VAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQKLYTLFKAVDAVQ 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS--REIEAKQHNLSYI 263
           +EINPL     G +  +D+K++FDDNA +R  DI  + DV+EE+S  RE+EA ++NL+Y+
Sbjct: 121 IEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSM-DVTEEESDPREVEAAKYNLNYV 179

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
           A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLDVGGG  +D+VA AF+I+T+D  VKG
Sbjct: 180 AMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKG 239

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+N+FGGI+ C  +  GI++A K++++N+PLV+RLEG NV+    ++  SGL + TA D
Sbjct: 240 ILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASD 299

Query: 384 LDDAAQKIVHAV 395
           LDDAA K V A+
Sbjct: 300 LDDAAHKAVAAL 311


>gi|294862256|ref|NP_001171070.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           isoform 1 precursor [Homo sapiens]
          Length = 440

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 156/361 (43%), Positives = 214/361 (59%), Gaps = 3/361 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 G 361
           G
Sbjct: 395 G 395


>gi|330443809|ref|YP_004376795.1| succinyl-CoA synthetase beta chain [Chlamydophila pecorum E58]
 gi|328806919|gb|AEB41092.1| Succinyl-CoA synthetase beta chain [Chlamydophila pecorum E58]
          Length = 387

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/389 (39%), Positives = 228/389 (58%), Gaps = 10/389 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y VP+    V+ S+      ++ L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTSYEVPIPPYRVVFSISEVPQVLQDLGMDSGVVKVQVHAGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S + ++  + +++G   I+ QT      V  V +     I +E Y+
Sbjct: 57  ------HGGVVVAKSTEEILQAVTKLIGMRFISNQTSGEALPVEKVLISPLVGIAKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMDIEE+A+ +P+ +  L +     + +  +   C  +E  
Sbjct: 111 AVIMDRKHRCPTLMLSKSGGMDIEEIAQKFPELLLFLPLTVFGKIYTYQLRQACSFMEWS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L   L + F D D SLLE+NPL++     L  LD+K++ DDNALYRH  ++
Sbjct: 171 GDIANQGVKLIKKLIQCFYDNDASLLEVNPLVLTDADELVALDAKVTLDDNALYRHPHLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S+E+ R++ AKQ  LSYIALDG+IGC+VNGAGLAM+T+DI+K YGGA ANFLDVG
Sbjct: 231 ACYDPSQENIRDVLAKQVGLSYIALDGDIGCIVNGAGLAMSTLDILKFYGGAAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A   ++  A  ++ SD  VK + INIFGGIM C ++  G++S +   K  +P+V+RLE
Sbjct: 291 GSASAQQIKEAVSLVLSDERVKVLFINIFGGIMDCSLVSSGLVSVMGTRKDTLPIVLRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G NVD+G  ++ +SG++      + + AQ
Sbjct: 351 GTNVDLGKTIVQQSGISCHFVSSMQEGAQ 379


>gi|332817256|ref|XP_003309926.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Pan troglodytes]
          Length = 440

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 156/361 (43%), Positives = 214/361 (59%), Gaps = 3/361 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFI 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 G 361
           G
Sbjct: 395 G 395


>gi|226466884|emb|CAX69577.1| succinate-Coenzyme A ligase, GDP-forming, beta subunit [Schistosoma
           japonicum]
          Length = 441

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 164/402 (40%), Positives = 235/402 (58%), Gaps = 17/402 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q K L+  Y + V K +V+ +      A        YV+K+QI AGGRG G F+
Sbjct: 22  INLQEFQCKELMSNYGINVQKFIVVRNPSEVNLAKNNFIVEEYVIKAQIPAGGRGMGVFR 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV +      +   + ++LG+ L+TKQT  +G  V+ V V +  DI RE Y 
Sbjct: 82  D---GFKGGVHLTKDPNEMAHIVMKMLGNHLVTKQTTSSGILVSQVMVAEALDIRRETYF 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     IA +QGGMDIEE+AK  P  I K  I+  IGVT E      + L   
Sbjct: 139 AILMDRISNSPIMIACSQGGMDIEELAKHCPSTIIKESINVTIGVTDEQACRFANALGFT 198

Query: 181 GQARI--DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            Q ++  +      NLYK F   D   +EINP    K+G++   D+K++FD NA+YR  +
Sbjct: 199 PQTKLYEETCKQIRNLYKMFTALDCVQIEINPFGETKDGQIVCFDAKLAFDQNAIYRQPE 258

Query: 239 IQ----ELRDVSEEDS-------REIEAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDII 286
           I     E+ D+    S        E +A  + L+YI L DGNIGC+VNGAGLAMATMD+I
Sbjct: 259 IHKMALEVEDIEVAASGPNSVTALEADAAHNGLNYIGLNDGNIGCIVNGAGLAMATMDLI 318

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
             + G PANFLD+GG   + +V  AF +++  SS+  IL+NIFGGI+ C ++ +G+LSA+
Sbjct: 319 HYHHGKPANFLDLGGSVTRSQVEKAFCLLSRHSSINCILVNIFGGIVNCKIIAEGLLSAL 378

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           K   INIP+V+RLEG +      LI+  GL++I A  L++AA
Sbjct: 379 KNNIINIPVVVRLEGNSAVEAQSLISNCGLDLIAATSLEEAA 420


>gi|294881825|ref|XP_002769505.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239872986|gb|EER02223.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 368

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 227/366 (62%), Gaps = 5/366 (1%)

Query: 32  ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTL 91
           E   + L G   VVK+Q+  GGRG+G FKE     +GGV + SS         ++L  +L
Sbjct: 6   EDYARRLGGGDVVVKAQVLGGGRGRGHFKE--NGFQGGVHIASSPSEARIVAEQMLNKSL 63

Query: 92  ITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYP 151
           +T+QTG +G     V + +   I+ E Y ++++DR  G    + S  GGM IEEVA ++P
Sbjct: 64  VTRQTGLSGRTCKGVLLCEKLPIVAEKYFAIMLDRGLGGPVMVMSKHGGMSIEEVAIEHP 123

Query: 152 QKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL 211
             + K+ ID   G+T+       + L   G            LY+ F   D ++LE+NPL
Sbjct: 124 DAVTKIPIDVTTGLTTRQAEEAVEHLGFNGDPSAMA--TLKGLYRTFVGADCTMLEVNPL 181

Query: 212 IIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
             +++GR+ V D+K++FDDNA +R   I   RDV+E D +E+ A +  L+YI+LDG+IGC
Sbjct: 182 AELEDGRIMVCDAKLAFDDNAAFRQRTIHSQRDVTEVDPKEVAASRCGLNYISLDGSIGC 241

Query: 272 MVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGG 331
           MVNGAGLAMATMD++ + GG+PANFLD+GG    ++V  A  II SDS+VK +LINIFGG
Sbjct: 242 MVNGAGLAMATMDLLSVKGGSPANFLDIGGSVGVEEVKTALGIINSDSNVKSVLINIFGG 301

Query: 332 IMRCDVLVKGILSAVKEVKI-NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           I++CDV+ +GI+ A +E+ I + P+V+RL G NV+ G  ++A++GL+     DL++AA K
Sbjct: 302 IVKCDVVAEGIVRAAQELSIDHKPIVVRLVGTNVERGKSILAQAGLDYYAIDDLNEAAIK 361

Query: 391 IVHAVK 396
            V   K
Sbjct: 362 AVELSK 367


>gi|70952059|ref|XP_745223.1| ATP-specific succinyl-CoA synthetase beta subunit, [Plasmodium
           chabaudi chabaudi]
 gi|56525479|emb|CAH78828.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium chabaudi chabaudi]
          Length = 338

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 134/308 (43%), Positives = 208/308 (67%)

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
           ++L +TL+TKQTGP G + N V++ +   I +E Y++ L+DR S  +  + S+ GG  IE
Sbjct: 12  KMLNNTLVTKQTGPEGKKCNTVFICERFYIRKERYVAFLLDRNSDNICLLGSSVGGSSIE 71

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +++K  P+ I+K+ I+   G+T+      C+ +  +G       D+  NLYK F   D +
Sbjct: 72  DISKKTPEAIYKININIKDGLTNGQSREFCEQIGFKGNELDIATDMLVNLYKIFKKYDCT 131

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           LLEINPL    +GR+   D+K++FDDNA YR  +I + RD+++E+  E+EAK++NL+Y++
Sbjct: 132 LLEINPLSETNDGRVLCCDAKLNFDDNAEYRQKEIFDKRDLTQENPEELEAKKYNLNYVS 191

Query: 265 LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
           LDGNI CMVNGAGLAMAT+D+I L+ G+P+NFLDVGG A ++++A A KII ++   K  
Sbjct: 192 LDGNIACMVNGAGLAMATLDLIVLHKGSPSNFLDVGGSATEEEIAEALKIIDNNDKAKVC 251

Query: 325 LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
            INI GGIMRCD++ +GI++A K+++   PL++RLEG N     +++ ES +  I   D+
Sbjct: 252 FINILGGIMRCDIIARGIINAAKQIQFKKPLIVRLEGTNEKEAIKILEESNIKCIICQDM 311

Query: 385 DDAAQKIV 392
           + AA+K V
Sbjct: 312 NLAAEKAV 319


>gi|256371136|ref|YP_003108960.1| succinyl-CoA synthetase, beta subunit [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256007720|gb|ACU53287.1| succinyl-CoA synthetase, beta subunit [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 382

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 151/377 (40%), Positives = 233/377 (61%), Gaps = 29/377 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K L R++ VP ++G V  +V  A +A +TL  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLKEYQGKDLFRRFGVPTSEGRVCVTVEEAVAAAETLGYPV-VVKAQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV ++ +++      ILG  L        G RV  V++E  +DI RE Y 
Sbjct: 57  -------GGVRVAATEEALREAAGAILGMDL-------KGHRVKEVWIEPASDIRREYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DRT+     + S  GG+DIEEVA+ +P+ I ++ IDP+ G+T     +L +  +  
Sbjct: 103 SFTLDRTARQYLLMLSAMGGVDIEEVARTHPEAIARVHIDPIDGLTP----ALAE--QAV 156

Query: 181 GQARIDGGD-----LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
             A ID G      +   LY+AF + D  L+E+NPLI+  +G+L  LD+K++ DD+A +R
Sbjct: 157 ATAGIDEGREELPAMLGALYRAFVEGDADLVEVNPLIVRSDGKLWALDAKVTLDDSAAFR 216

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H + +  R   E DSRE  A+   L+YI L+G++G + NGAGLAM+T+D+++  GG  AN
Sbjct: 217 HPEWEAYRADEELDSREAIARARGLNYIGLEGSVGIIANGAGLAMSTLDVVQQVGGRAAN 276

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD+GGGA  D + AA ++I +D  V+ +L+NIFGGI RCD + +GI++A++ V++  P+
Sbjct: 277 FLDLGGGAGADTMTAALEVIATDPQVRALLVNIFGGITRCDEVARGIVAALERVRLPFPM 336

Query: 356 VMRLEGANVDIGNRLIA 372
           V+RL+G N   G  +++
Sbjct: 337 VVRLDGTNAAEGRAILS 353


>gi|226227052|ref|YP_002761158.1| succinyl-CoA synthetase beta chain [Gemmatimonas aurantiaca T-27]
 gi|259511783|sp|C1A8X8|SUCC_GEMAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226090243|dbj|BAH38688.1| succinyl-CoA synthetase beta chain [Gemmatimonas aurantiaca T-27]
          Length = 381

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/398 (40%), Positives = 226/398 (56%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LLR   VP+  G + ++   AE+  K L G   +VK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLRVAGVPIPPGEIATTPEQAEAIAKKL-GTAVMVKAQVHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   + ++       ILG T+           V  V V   ADI  E Y+
Sbjct: 57  -------GGVKFCPTPEAAKEKATAILGMTI-------KDLTVEKVLVTVAADIASEAYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +    F+ S  GG+DIEEVA   P+KI    +D   G+   +   +   L   
Sbjct: 103 GIIVDRATKKPVFMVSAAGGIDIEEVAATTPEKILYHPVDTRYGLLPFEAMRMGFFLYQD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY AF     S+ EINPL++     L  +D K+  DDN L R   I 
Sbjct: 163 VKLARQAAKIMQQLYTAFMSAGCSIAEINPLVVTPQNELIAVDGKMVIDDNELDRLPQIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S E   E++A+  NL++I LDGN+GC+VNGAGLAMATMD++K YGG PANFLD+G
Sbjct: 223 ALRDESSEAPSEVDARNANLTFIKLDGNVGCVVNGAGLAMATMDLVKYYGGDPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +KV  A +IIT+D +VK IL NIFGGI R D +  GI++A K   + +P+V+RL 
Sbjct: 283 GSSNPEKVVNALRIITADPNVKCILFNIFGGITRTDDVANGIVTATKANPLKVPIVIRLT 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH-AVKG 397
           G N ++  +++ E+G +  +  D+D A Q+ V  A KG
Sbjct: 343 GTNEELALQILKENGFSASS--DMDSAVQRAVELATKG 378


>gi|71892111|ref|YP_277843.1| succinyl-CoA synthetase, beta chain [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796217|gb|AAZ40968.1| succinyl-CoA synthetase, beta chain [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 391

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 161/400 (40%), Positives = 242/400 (60%), Gaps = 20/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           MN++EYQAK L+ KYN+PV KG V ++++  E  I +     GP +VVK Q+ AGGRGK 
Sbjct: 1   MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGP-WVVKCQVRAGGRGK- 58

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S K+++S   + LG+ LIT QT  TG  V  + +E    I++E
Sbjct: 59  ---------SGGVCLVHSTKNILSFANKWLGNRLITYQTTDTGELVTSILIEPAVKIIQE 109

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            YLS+ +DR    +  +ASTQGGM+IE   +  P  I K++I+P +G+       L   L
Sbjct: 110 FYLSISIDRDESQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPYQGRILACKL 169

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L G        +  ++ +   + D++L+EINPL I  +     LD+K+  D NA++R  
Sbjct: 170 GLSGAKINQFSRIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQ- 228

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
              EL ++   + + I+     ++YI L+GNIGCMVNGAGLAMATMD+IK  GG PANFL
Sbjct: 229 --SELLNICAIN-KPIDMLNF-INYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFL 284

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKINIPLV 356
           D+GGGA+++ + +AF +I  ++ V+ IL+NIFGGI+ CD++ + I++A+ +    +IP+V
Sbjct: 285 DIGGGANKECIISAFNMILKNAKVQAILVNIFGGIVCCDLVAECIITALARYTTKHIPIV 344

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            RLEG N  +G+  +  S LN+I   +L  A Q+ V AV 
Sbjct: 345 ARLEGNNSTLGSNRLINSKLNIIVTDNLIYAIQQSVTAVN 384


>gi|327298261|ref|XP_003233824.1| ATP-specific succinyl-CoA synthetase beta subunit [Trichophyton
           rubrum CBS 118892]
 gi|326464002|gb|EGD89455.1| ATP-specific succinyl-CoA synthetase beta subunit [Trichophyton
           rubrum CBS 118892]
          Length = 393

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 159/396 (40%), Positives = 225/396 (56%), Gaps = 54/396 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGEEAEAIAKNIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR          TQ        A   P+ +                          
Sbjct: 151 AILMDR---------QTQ--------APCVPEAV-------------------------- 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 168 --------ETIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 220 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 280 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 339

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N++  + LI+ESGL + +  DL  AA+K V   K
Sbjct: 340 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSK 375


>gi|288931610|ref|YP_003435670.1| succinyl-CoA synthetase subunit beta [Ferroglobus placidus DSM
           10642]
 gi|288893858|gb|ADC65395.1| succinyl-CoA synthetase, beta subunit [Ferroglobus placidus DSM
           10642]
          Length = 381

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/397 (38%), Positives = 232/397 (58%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  KY + + KG + ++V       + L G + V+KSQI  GGRGK    
Sbjct: 1   MRLHEYQAKQIFAKYGIKIPKGKLATTVEEVRKIAEELGGKV-VLKSQILVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S++  +   +++ G  +        G RV  +YVE+  +I RE+Y+
Sbjct: 57  -------GGIKLANSVEEAVEIAKDLFGKVI-------KGHRVEKIYVEEQLNIQREMYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR    +A I S+ GGMDIEE+A  +P+KI ++ I+PL G+    +  +     + 
Sbjct: 103 GLTLDRAEKGIALIVSSVGGMDIEEIAAKHPEKIARITINPLYGLWDFQIREVLYKSGMP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +   LYK   D +  L EINPL++   G L   D++++ DDNALYRH +++
Sbjct: 163 KELHKEITGIIKALYKILIDHEAELTEINPLVLTDKG-LFAADARLNVDDNALYRHPELK 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +E D  E  A++  L+Y+ LDGNIG + NGAG++M+TMD+I L GG PANFLD+G
Sbjct: 222 ELRDYTEVDQIERIAEEKGLNYVKLDGNIGVIANGAGMSMSTMDLIYLEGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A K I  D +VK I +NIFGGI RCD + KG++ A +E+ I +P+V+RL 
Sbjct: 282 GGASSEVVKEAIKTILMDKNVKVIFMNIFGGITRCDEVAKGLVKAFQEIVIPVPIVLRLA 341

Query: 361 GAN----VDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N      I    +     N+I    +++ A+K V 
Sbjct: 342 GTNEEEGRRIIEEFLEREKKNIIVVETMEEGAKKAVE 378


>gi|190347664|gb|EDK39982.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 327

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/312 (45%), Positives = 198/312 (63%), Gaps = 4/312 (1%)

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
            ++LG  LITKQTG  G  V  VY+ +  D   E YL++L+DR + +   +AS+QGGMDI
Sbjct: 13  EKMLGHKLITKQTGEAGKEVTAVYIVERKDAKTEAYLAILMDRATQLPMIVASSQGGMDI 72

Query: 144 EEVAKDYPQ--KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           E VA   P   K F + +D   GVT      +  +L    +A  +       LYK F ++
Sbjct: 73  EGVAAKDPDAIKTFPIQLDE--GVTDSKATEIASVLGFSQEAVPEAASTIQKLYKVFMER 130

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D + +EINPL  + +G +  +D+K+ FDDNA +R  ++   RD ++ED  E+EA ++ L+
Sbjct: 131 DCTQVEINPLSEITDGSVMAMDAKLGFDDNASFRQKEVFSWRDPTQEDPEEVEAAEYGLN 190

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           +I LDGNI  +VNGAGLAMATMDIIKL GG PANFLD GG A  + +  AF++I SD  V
Sbjct: 191 FIKLDGNIANIVNGAGLAMATMDIIKLNGGEPANFLDCGGTATPETIEKAFELILSDKKV 250

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
            GI +NIFGGI+RCD + KG+++A K  +++IP+V+RL+G N+     LI  SGL +   
Sbjct: 251 NGIFVNIFGGIVRCDYVAKGLIAATKNFQLDIPVVVRLQGTNMKEAKELINNSGLKLYPF 310

Query: 382 IDLDDAAQKIVH 393
            DLD AA+KIV 
Sbjct: 311 EDLDPAAEKIVS 322


>gi|307200145|gb|EFN80454.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Harpegnathos saltator]
          Length = 449

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 232/392 (59%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + +HE+ A  LL+   +P     V  +     +  K       V+K+Q+ AGGRG     
Sbjct: 25  LEVHEHVAYTLLKTAGIPTPSFEVAKTPDETAALAKDFKTKDIVLKAQVLAGGRGM---G 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV +  + +        ++G  L+TKQTG  G   N V +       +E YL
Sbjct: 82  RFRGTDISGVMMCETPEQAKKLANNMIGKVLVTKQTGAAGKICNSVMITTRMFPRKEYYL 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++RT      I S QGG++IEE+A   P+ I  + ID   G+T+E   S+ + L L 
Sbjct: 142 AMMLERTFDGPVLIVSKQGGVNIEEIAATNPEAISYIPIDMRKGLTAEQADSVGNKLGLT 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ++     +  NLY+ F +KD  LLEINP +    G+   LD K +FDD+A +R  ++ 
Sbjct: 202 GQSKEIASIIACNLYELFIEKDALLLEINPFVEDICGQYYALDCKCNFDDSADFRQKELF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             +D ++ D  E+EA++HNL+YI LDGNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 262 AFKDTTQMDPNEVEAEKHNLNYITLDGNIGCLVNGAGLAMATMDIIKFYGGMPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V   FKI+++  +V+ IL+NIFGGIMRCD++ +GI++A K++ +  P+V+RL+
Sbjct: 322 GTATIETVTEGFKILSAGENVEAILVNIFGGIMRCDIIAQGIINAFKQLDLKTPVVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NV     LIA++ L V +  D  +AA+  V
Sbjct: 382 GTNVKEAKALIADAKLKVFSIDDFAEAAETSV 413


>gi|307178344|gb|EFN67098.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Camponotus floridanus]
          Length = 384

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 160/362 (44%), Positives = 225/362 (62%), Gaps = 15/362 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHE+ A  LL++  +PV    V  +   A +  K L     V+K+QI AGGR  G FK
Sbjct: 35  LEIHEHMAYTLLKEAGIPVPPFGVAKTPDEAANLAKNLNTKDLVLKAQILAGGRAMGHFK 94

Query: 61  ELPADSKGGVRVES--SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           +   D  G V  E+   +K + S++   +G  LITKQTG  G   N V V       +E 
Sbjct: 95  D--KDLSGVVMCETPEQVKELTSNM---IGKVLITKQTGAAGKICNSVMVTARMFPRKEH 149

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y++++++      AF  S   G++IEE+A   P+ +  + ID   G+TS    S+ + L 
Sbjct: 150 YMAVMLES-----AFDVS---GVNIEEIAAVNPEAVTYIPIDISKGLTSAQADSVGEKLG 201

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L G  +     +  NLY+ F +KD  L+EINP      G+   LD K  FDD+A +R  +
Sbjct: 202 LAGNNKEIASIIACNLYELFVEKDALLVEINPFAEDICGQYYALDCKCKFDDSADFRQKE 261

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  L+D ++ D +E+EA++HNL+YIALDGNIGCMVNGAGLAMATMDIIKLYGG PANFLD
Sbjct: 262 LFTLKDTTQMDPKEVEAEKHNLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGTPANFLD 321

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A  + V   FKI++SD  V+ ILINIFGGIMRCD++ +GI+ A K++K++IP+V+R
Sbjct: 322 VGGTATIETVTEGFKILSSDPKVEAILINIFGGIMRCDIIAQGIIDAFKQLKLHIPIVVR 381

Query: 359 LE 360
           L+
Sbjct: 382 LQ 383


>gi|316972114|gb|EFV55805.1| succinyl-CoA synthetase, beta subunit [Trichinella spiralis]
          Length = 435

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 226/389 (58%), Gaps = 3/389 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+Q   LL++ ++P  +  VI++V  A  A+  L G  +V+K+ +  GGRG G F 
Sbjct: 25  LSVMEHQGLKLLKELDIPCPEHEVITNVDQATEAMARLGGSDFVLKALVPTGGRGLGVFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV+   S +  +    +++G  L TKQTG  G     + +     + RE Y 
Sbjct: 85  N---GLKGGVQTICSEEEAVDIASKMIGHHLKTKQTGDKGLLCEKLLLAKRHFLRREYYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       I   QGGM IE++A + P  I  L +D + G+       +   +   
Sbjct: 142 SITLDRMHNGPVLIGCGQGGMSIEKIAAEDPDAIVYLPVDVVDGIDENKAREMISKMGFT 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++F  LY  F   D +L+EINP+    +G L+ +D K+  DD A YR  ++ 
Sbjct: 202 SHCQDQALEIFKKLYSMFMKYDCNLVEINPMAEDSSGNLQCMDCKVVVDDAAAYRQKELF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +      +  E EA + NL+YI L+G+I C+VNGAGLAMATMDIIKL+GG PANFLD+G
Sbjct: 262 AMVGQRATNELEQEAAEFNLNYIPLEGDIACLVNGAGLAMATMDIIKLHGGEPANFLDIG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V+AAF+II+ DS V+ IL+NIFGGI+RCDV+  G+  A K++ + +P+V RL+
Sbjct: 322 GGASIDQVSAAFRIISKDSKVRAILVNIFGGILRCDVIATGVCRAAKDLNLTVPIVCRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G  VD    +I  + L V+   +LDDAA+
Sbjct: 382 GTKVDDAKAVITANQLKVLAVDNLDDAAK 410


>gi|262341346|ref|YP_003284201.1| succinyl-CoA ligase (ADP-forming) subunit beta [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272683|gb|ACY40591.1| succinyl-CoA ligase (ADP-forming) subunit beta [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 399

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/404 (40%), Positives = 233/404 (57%), Gaps = 25/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ + +L  +++ V  G++ SS    V AA+   K       V+K+QIHAGGRGK
Sbjct: 1   MNLHEYQGREILNSFSIQVPYGILASSPEESVEAAKIIFKRTGKKSLVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GG+++  +L  V    + ILG  LIT QT   G  V  + + +  DI  
Sbjct: 61  A----------GGIQIAKTLDEVYEKSKNILGKFLITPQTSKKGKLVRKILLSE--DIYS 108

Query: 117 -------ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                  E YLS+L++R       + S +GG++IE ++K  P KI+   IDP++G+    
Sbjct: 109 NELNSPIEYYLSILLNRDIEKDIILYSKEGGVEIENLSKKNPNKIYTEEIDPILGLQLFQ 168

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
              +   L +      +      +LYKA+   D  LLEINPLI   + ++  +D KI  D
Sbjct: 169 TRKIAFNLGMDSDTLKNFSSFLISLYKAYKAYDALLLEINPLIKTFDNKIIPVDIKIVLD 228

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DNAL+RH       D  + D  E EA + +L+++ L+GN+GCMVNGAGLAMATMD+IK  
Sbjct: 229 DNALFRHKKYAINNDSKDIDFLEKEANEAHLNFLKLEGNVGCMVNGAGLAMATMDMIKFC 288

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG PANFLD+GG AD+ +V  AF +I  D SVK ILINIFGGI+RCD + +GI+++  ++
Sbjct: 289 GGEPANFLDIGGSADKKRVEKAFSLILRDKSVKTILINIFGGIVRCDTVSEGIINSYSKI 348

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
              I IP+V+RL+G N  I  +++  S L + +   L DAA KI
Sbjct: 349 DHDIQIPVVVRLQGTNERIAKKMLQNSLLPIYSTDTLKDAADKI 392


>gi|289679950|ref|ZP_06500840.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae FF5]
          Length = 290

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 189/300 (63%), Gaps = 10/300 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290


>gi|209879644|ref|XP_002141262.1| succinyl-CoA synthetase, beta subunit [Cryptosporidium muris RN66]
 gi|209556868|gb|EEA06913.1| succinyl-CoA synthetase, beta subunit, putative [Cryptosporidium
           muris RN66]
          Length = 472

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/448 (35%), Positives = 252/448 (56%), Gaps = 55/448 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY------VVKSQIHAGGR 54
           +++HEYQ+  LL+KY + + K  V +++   +   K L    +      V+K+Q+  GGR
Sbjct: 27  LHLHEYQSMELLKKYKLAIPKHGVATNLEEVKEIGKELAKQSHNKEFNLVIKAQVLTGGR 86

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           G G FKE   + +GGV+   +L  +I    ++LG TLITKQTG  G     V + +   I
Sbjct: 87  GLGYFKE--NNFQGGVQECKNLDQLIDISEKMLGKTLITKQTGLEGKICKKVLIVEKIPI 144

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           L+E+YL++ +DR S     I   +GG  IE+ AK+ P  I K+ IDP  G+T +    + 
Sbjct: 145 LKEMYLAIALDRESASTCIIFCPEGGTSIEDKAKENPNNIHKICIDPKEGLTRDITNKIS 204

Query: 175 DML--ELQGQARIDGGDLFPNL---------------------------------YKAFC 199
           ++L  E  G  +    D F NL                                 Y+ F 
Sbjct: 205 NILLGEYFGNIKDMKSDNFLNLNINKKNLKYFDKIFKMNEVEMLKNEMYEIVNKLYQLFR 264

Query: 200 DKDMSLLEINPLIIMKN----------GRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           + D +L+E+NPL++ KN            L + D KI+ DDNA YR  ++ ++ DV ++D
Sbjct: 265 ETDSTLIEVNPLVLKKNIPKLRDNDSIKNLLICDIKINIDDNASYRQKELFDIEDVEQKD 324

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
             E+EA ++ L+YI L+GN+GC+VNGAGLAMATMDIIK Y   PANFLD+GG A +++V 
Sbjct: 325 QIEVEAAKYGLNYIRLNGNVGCIVNGAGLAMATMDIIKFYNAEPANFLDLGGTAQKEQVC 384

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            A +I+ +D++VK I++N+F GI+R DV+ +GI+ AV+ + I  P+V+RL+G N++    
Sbjct: 385 KALEILHNDNNVKVIMVNVFAGIVRADVVAEGIIEAVETLNIKKPIVVRLQGTNIEQAKV 444

Query: 370 LI--AESGLNVITAIDLDDAAQKIVHAV 395
           L+   +  +N+    DLD  A+K +  +
Sbjct: 445 LMDKKKDSINITFCTDLDSTAKKAISYI 472


>gi|146414762|ref|XP_001483351.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 327

 Score =  273 bits (697), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 140/310 (45%), Positives = 195/310 (62%)

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
            ++LG  LITKQTG  G  V  VY+ +  D   E YL++L+DR + +   +AS+QGGMDI
Sbjct: 13  EKMLGHKLITKQTGEAGKEVTAVYIVERKDAKTEAYLAILMDRATQLPMIVASSQGGMDI 72

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           E VA   P  I    I    GVT      +  +L    +A  +       LYK F ++D 
Sbjct: 73  EGVAAKDPDAIKTFPIQLDEGVTDSKATEIASVLGFSQEAVPEAALTIQKLYKVFMERDC 132

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           + +EINPL  + +G +  +D+K+ FDDNA +R  ++   RD ++ED  E+EA ++ L++I
Sbjct: 133 TQVEINPLSEITDGSVMAMDAKLGFDDNASFRQKEVFSWRDPTQEDPEEVEAAEYGLNFI 192

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            LDGNI  +VNGAGLAMATMDIIKL GG PANFLD GG A  + +  AF++I SD  V G
Sbjct: 193 KLDGNIANIVNGAGLAMATMDIIKLNGGEPANFLDCGGTATPETIEKAFELILSDKKVNG 252

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           I +NIFGGI+RCD + KG+++A K  +++IP+V+RL+G N+     LI  SGL +    D
Sbjct: 253 IFVNIFGGIVRCDYVAKGLIAATKNFQLDIPVVVRLQGTNMKEAKELINNSGLKLYPFED 312

Query: 384 LDDAAQKIVH 393
           LD AA+KIV 
Sbjct: 313 LDPAAEKIVS 322


>gi|261749142|ref|YP_003256827.1| succinyl-CoA synthetase subunit beta [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497234|gb|ACX83684.1| succinyl-CoA synthetase, beta subunit [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 409

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/412 (39%), Positives = 238/412 (57%), Gaps = 31/412 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HE+Q K +LR ++V +  GV++++    V AA+   K       V+K+QIHAGG   
Sbjct: 1   MNLHEFQGKEILRSFSVKIPDGVLVTTPEEAVQAAKMIFKKTNKNSLVIKAQIHAGG--- 57

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA---- 112
                      GG+++  SL+ V    + +LG  LIT QT   G  V  V + D      
Sbjct: 58  -------RGKGGGIQIAKSLEEVYEKSKNLLGKYLITPQTSKKGKLVRKVLISDDVYSTP 110

Query: 113 ----DILR-------ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
               +I++       E YLS+LV+R       + S +GG+DIE+++K  P KIF   IDP
Sbjct: 111 NRMGEIMKNSFFSPKEYYLSILVNRDIEKNVILYSKEGGIDIEDISKKRPDKIFLEEIDP 170

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
            +G+    V  +   L L  +   D  +   +LY A+   D  LLEINPLI   + ++  
Sbjct: 171 FLGLQLFQVRKIGYNLGLNEEVLKDFRNFLISLYNAYLSCDALLLEINPLIRTFDHQIVA 230

Query: 222 LDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
           +D+K+  DDNAL+R       RD  EED  EIEA +  L+++ L+GN+GCMVNGAGLAMA
Sbjct: 231 VDTKMVLDDNALFRQKKYASFRDQKEEDPVEIEAFEAKLNFLKLEGNVGCMVNGAGLAMA 290

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           TMD+IK  GG P+NFLD+GG AD+++V  AF+II  D SVK I INIFGGI+RCD + +G
Sbjct: 291 TMDMIKSCGGNPSNFLDIGGSADKERVEKAFQIILKDPSVKAIFINIFGGIVRCDTVAEG 350

Query: 342 ILSAVKEV--KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I+++   +  KI IP+++RL+G N  +  + +  S L +     L +AA +I
Sbjct: 351 IINSYHNIDHKIKIPVIVRLQGTNEMVAKKRLENSQLPIYYTSTLKEAADRI 402


>gi|194379366|dbj|BAG63649.1| unnamed protein product [Homo sapiens]
          Length = 329

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 199/307 (64%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G  L TKQTG  G   N V V +     RE Y ++ ++R+      I S+ GG++IE+
Sbjct: 1   MIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA + P+ I K  ID   G+  E    L   +           +    LY  F   D ++
Sbjct: 61  VAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATM 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI L
Sbjct: 121 IEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD  V  IL
Sbjct: 181 DGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+SGL ++   DLD
Sbjct: 241 VNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLD 300

Query: 386 DAAQKIV 392
           +AA+ +V
Sbjct: 301 EAARMVV 307


>gi|85860260|ref|YP_462462.1| succinyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB]
 gi|85723351|gb|ABC78294.1| succinyl-CoA synthetase beta chain [Syntrophus aciditrophicus SB]
          Length = 398

 Score =  272 bits (695), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 156/391 (39%), Positives = 235/391 (60%), Gaps = 10/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M I+EYQ K   R + +P  +G    +     +A ++L     V+KSQI AG        
Sbjct: 10  MKIYEYQVKEFFRSFGIPTPRGAAGKTSDEIVTAARSLGVMPVVLKSQIKAG-----GRG 64

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +           E+ L+++     ++LGS L+T QTGP G +VN + +E+  D  RELY+
Sbjct: 65  KAGGIRTANTLEEAGLQAI-----DLLGSRLVTAQTGPAGEQVNSLLLEERIDHERELYV 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +LVDR +G  A + S +GG+DIE++ ++ P +I    IDP  G+ S   + +   L L 
Sbjct: 120 GILVDRETGRPALLVSGEGGVDIEKLGREAPGQILCESIDPAYGLRSFQASRVFLSLGLP 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     +L  +LY+ F + D S +EINPL +  +G    LD K++ DDNALYRH  + 
Sbjct: 180 SASAARCAELSLSLYRLFMEMDCSDVEINPLALTTSGEPVALDGKVNVDDNALYRHPPLA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L +  EE++ E  A    L+YI L+G++GCMVNGAGLAMATMD+IK+ G  PANFLDVG
Sbjct: 240 SLHEKEEENALEAAASALGLNYIKLNGSVGCMVNGAGLAMATMDLIKMTGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   ++    +I+ +D +VK + +NIFGGI+RCD + +GI   V+++ I++P+V+RLE
Sbjct: 300 GGASVSRIREGLRIVLADRNVKILFVNIFGGILRCDTVAEGIAQGVRDLSISVPVVIRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G N D G ++++ SGLN I   DL +A  +I
Sbjct: 360 GTNRDEGLKILSSSGLNFIQVTDLREAVLRI 390


>gi|83768774|dbj|BAE58911.1| unnamed protein product [Aspergillus oryzae]
          Length = 389

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 160/398 (40%), Positives = 235/398 (59%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NI ++ +  LL+++ +PV +G V+ S  AA   +  +  P  V+K+QI AGGRGKG++ 
Sbjct: 3   LNIAQHHSHNLLKQFQIPVPEGFVVKSPEAARDVVYNIGAP-SVMKAQILAGGRGKGKYN 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D KGGVR+  S      +   ++G +L+TKQT P G  VN +Y+    DI +E Y+
Sbjct: 62  ---SDGKGGVRIVDSPDEAFENASNMIGYSLVTKQTPPDGLPVNKLYIYKSVDIAQEFYV 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++  DR       + S  GG++IE       +  F L      G+T E  A     +E Q
Sbjct: 119 AITFDRARYKPVLLMSDDGGVNIESNVNQLQRFWFNLST----GITPEIAA----YIEAQ 170

Query: 181 -GQARIDGG---DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            G +  D G    +   L K F +KD +LLE+NP +    G L  +D+K +FDD+A +R 
Sbjct: 171 FGFSDDDMGMVTHILRQLVKLFREKDATLLELNPFVRTTEGSLICIDAKFNFDDSAKFRQ 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++  L + S E+  E EA Q  LSYI LDGNIG +VNGAGLAMAT D++ LYGG  ANF
Sbjct: 231 PELVSLVEHSAEEKDEYEASQLGLSYIRLDGNIGVIVNGAGLAMATNDLVTLYGGNCANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPL 355
           LD+GGGA ++ ++ AF I+  DS  K + INI+GGI+RCD++ + IL+A   +   +IP+
Sbjct: 291 LDIGGGATKETLSKAFSILQGDSRTKALFINIYGGIVRCDMIAESILAASAAMGGFSIPV 350

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           V+RL+G N + G +L    G N+I   D D AA+KIV 
Sbjct: 351 VVRLQGTNYEKGFKL----GNNIILEADFDAAAKKIVE 384


>gi|116199357|ref|XP_001225490.1| hypothetical protein CHGG_07834 [Chaetomium globosum CBS 148.51]
 gi|88179113|gb|EAQ86581.1| hypothetical protein CHGG_07834 [Chaetomium globosum CBS 148.51]
          Length = 447

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 30/410 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y + + KG V ++   AE+  K +     V+K+Q+ AGGRGKG   
Sbjct: 36  LSIHEYRSADLLRQYGIDLPKGSVATTAAEAEAVAKNIGTDDMVIKAQVLAGGRGKGSVS 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG---ADILRE 117
              A    G R    L     D+R                 R+   +  DG     + R 
Sbjct: 96  TKRAQ---GRRARHLLADRGQDVRR-------------PDDRLQAHHQADGRRRPSVQRR 139

Query: 118 LYLS-------LLVDRTSGMV----AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           L+L        +L   + G        ++S+QGGMDIE VAK+ P  I    ID  +GVT
Sbjct: 140 LHLRAQVRPARVLPGHSHGPCFARPVIVSSSQGGMDIEGVAKENPDAITTTHIDINVGVT 199

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
            E    +   L    Q   D  D   NLY  F +KD + +EINPL    + ++  +D+K 
Sbjct: 200 DEIARGIATKLGFSEQCIEDAKDTIKNLYTIFLEKDATQIEINPLSETSDHKVMCMDAKF 259

Query: 227 SFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII 286
            FDDNA +R  ++ E RD ++ED  E+ A +  L++I LDG+IGC+VNGAGLAMATMDII
Sbjct: 260 GFDDNADFRQKEVFEWRDTTQEDPEEVRAAEAGLNFIKLDGDIGCLVNGAGLAMATMDII 319

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
           KL GG PANFLDVGGGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ V
Sbjct: 320 KLNGGQPANFLDVGGGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTV 379

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           K + + IP++ RL+G N++  ++LI ESG+ + +  DL  AA++ V   K
Sbjct: 380 KTLDLKIPIIARLQGTNMEQAHQLINESGMKIFSIDDLQSAAERAVQLSK 429


>gi|320101247|ref|YP_004176839.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Desulfurococcus
           mucosus DSM 2162]
 gi|319753599|gb|ADV65357.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfurococcus
           mucosus DSM 2162]
          Length = 379

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/400 (38%), Positives = 231/400 (57%), Gaps = 24/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K + R+Y V V +G++ SSV     A + L   + V+K+Q+  GGRG     
Sbjct: 1   MKLYEYEGKEIARRYGVDVPRGLLASSVEEVAEAYRRLGSQVVVLKAQVLVGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   SL+  ++   E+  +++        G RV  + VE+   I RELY+
Sbjct: 58  -------GGVKKAGSLEEAVAKAGELFSTSI-------RGERVGKLLVEEAVCISRELYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL VDR S  + ++ S  GG++IEE+A+ +P K+ ++ +DP  G +S         L L 
Sbjct: 104 SLTVDRASRRLVYLVSGMGGVEIEELARRHPDKVLRIPVDPFNGFSSYMARQALGFLGLP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   +Y+   D D  L+E NPL    +G L  LD+K+  DDN+LYRH D+Q
Sbjct: 164 WDKLGVLENVMRAMYRIMVDYDAELVEFNPLAYTCSGGLTALDAKVIVDDNSLYRHPDLQ 223

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            L  RD S   S E  AKQ   +Y+ LDG+IG + NGAGL MATMD I  YGG PANFLD
Sbjct: 224 PLYGRDAS---SYERLAKQLEFNYVELDGDIGVISNGAGLTMATMDAILHYGGRPANFLD 280

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA +++V  A KI+ +   VK +L+NIFGGI RCD +  G++ A+KE  +  P+V+R
Sbjct: 281 IGGGATRERVREAAKIVLTHPRVKAVLVNIFGGITRCDEVAAGVVEALKEAGVAKPVVVR 340

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           + G N + G R++ E G+N  T  ++D+A  K+V   + V
Sbjct: 341 MLGTNEEEGRRILREHGINAYT--EMDEAVLKVVQLAREV 378


>gi|307128580|ref|YP_003880610.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           CARI]
 gi|306483042|gb|ADM89912.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           CARI]
          Length = 392

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 154/399 (38%), Positives = 233/399 (58%), Gaps = 27/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVIS----SVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQA+ +L+ + + V   ++ S    +V+AA+   K     + V+K+QIHAG    
Sbjct: 1   MNIHEYQAQKILKTFGIKVPYSILASNLEETVYAAKKVFKKTKNYICVIKAQIHAG---- 56

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED---GAD 113
                      GG+++  S+  V      ILG  L+T QT   G  VN V + +    +D
Sbjct: 57  ------GRGKGGGIKIAKSIDDVYKKSSNILGRRLVTNQTNKKGKLVNKVIISEYVLNSD 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             +E Y+S+  DR       + S +GG++IE+++K    KI+   IDP IG+    +  +
Sbjct: 111 --KEYYVSIFYDRNIYKNIILYSKEGGLEIEDISK----KIYFQKIDPYIGLQEFQIRKI 164

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L+++  A     +    LY A+   D SL EINP +I  +  +  +D+K+  DDNA 
Sbjct: 165 AFHLKMKYSA---FNNFIKKLYNAYIYSDASLFEINPFLITNDNEILAIDAKVRLDDNAF 221

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +R+L  +E+ D  E    E+EAK+  L+++ LDGN+ CMVNGAGLAMATMD+IK+YG  P
Sbjct: 222 FRNLSYKEMSDEREYSIIELEAKKAGLNFLKLDGNVACMVNGAGLAMATMDMIKIYGANP 281

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKIN 352
           ANFLD+GG AD  ++     +I  D  VK ILINIFGGI+RCD++ +GI+    K+ KIN
Sbjct: 282 ANFLDLGGKADSKRIKKGLDLILKDKKVKLILINIFGGIVRCDIVAEGIIKFFEKKNKIN 341

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +P+++RLEG NV+I  +++  S L+      L++AA KI
Sbjct: 342 LPIIIRLEGTNVNIAKKILNNSKLHYYYVTSLEEAANKI 380


>gi|257485471|ref|ZP_05639512.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 288

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 137/298 (45%), Positives = 187/298 (62%), Gaps = 10/298 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLD
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLD 288


>gi|284046983|ref|YP_003397323.1| succinyl-CoA synthetase subunit beta [Conexibacter woesei DSM
           14684]
 gi|283951204|gb|ADB53948.1| succinyl-CoA synthetase, beta subunit [Conexibacter woesei DSM
           14684]
          Length = 384

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 154/397 (38%), Positives = 228/397 (57%), Gaps = 19/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K L  ++ +PV  G   ++V  A +A   +  P  VVK+Q+  GGRGK    
Sbjct: 1   MDLLEYQGKQLFARHGIPVPSGKPAATVQEAVAAADEIGYPC-VVKAQVLIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++            +ILG  +        G  V+ V++E  ++I  E Y 
Sbjct: 57  -------GGVKLAKDRAEATQYATDILGMDI-------KGFTVHEVWIEGASEIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +     + STQGGMDIEEVA+  P  + +L +DPL+G        L     + 
Sbjct: 103 SIVFDRAAKAPLVMLSTQGGMDIEEVAEKTPDALARLHVDPLLGFQDFHGRKLAFAAGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LY+ F  ++  L+E+NPLII     +  LD+K++ D N+LYRH D  
Sbjct: 163 GDLIRPVGAMLAKLYETFVAEEAMLIEVNPLIITPGRDVVALDAKVTLDGNSLYRHPDNA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S ED +E  A +  L+Y+ LDG+IG + NGAGL M+T+D++   GGAPANFLD G
Sbjct: 223 ALRDPSAEDPQEQMAHERGLTYVKLDGDIGILGNGAGLVMSTLDVVAQAGGAPANFLDAG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+  D + +A ++I SD+ V+ +L NIFGGI RCD + KG++ A   VK  +P V+RL+
Sbjct: 283 GGSKADAIVSAVEVILSDAKVRAVLFNIFGGITRCDEVAKGLIEAFDVVKPTVPFVVRLD 342

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           G N   G +L+A++ L NV TA  +++AA+K+V   K
Sbjct: 343 GTNDVEGRKLLADANLPNVATAKTMNEAAEKVVELSK 379


>gi|333029754|ref|ZP_08457815.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Bacteroides
           coprosuis DSM 18011]
 gi|332740351|gb|EGJ70833.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Bacteroides
           coprosuis DSM 18011]
          Length = 377

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 149/394 (37%), Positives = 226/394 (57%), Gaps = 19/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EYQAK++ + Y +P  K  +  S        K+      V+K+Q+  GGRGK    
Sbjct: 1   MKLYEYQAKSVFQAYGIPTEKHYLCFSPQDVVEVFKSNHLDKAVLKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++      +EI G  +           V+ + V +  +I +E Y+
Sbjct: 58  -------GGVKLVKSIEEAELRAKEIFGMQI-------KNLSVHQLLVSEAIEIKKEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DRT+  +  I S  GGMDIE+VAK+ P+K+ K  IDP  G+           L   
Sbjct: 104 SITLDRTTKSMVLILSASGGMDIEQVAKETPEKVLKFPIDPFHGIFDFQAKEYAYYLSSD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY  F +KD SL EINPL++  +G++  +D K+  D+NA YR  +I 
Sbjct: 164 IKEVNQIASILKKLYHLFVEKDASLAEINPLVLCGDGKVLAIDGKMDIDNNAKYRQPEIV 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +   S  +  E +AK+   SY+ LDG+IGCMVNGAGLAM TMD+I+LYGG PANFLD+G
Sbjct: 224 SMYKPSGSEIIEEKAKEKGFSYVQLDGDIGCMVNGAGLAMTTMDMIQLYGGKPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A +I+ SD +VK +LINIFGGI RCD + +G+  A K +K++IP+++RL 
Sbjct: 284 GSSNPQKVIDAMEILVSDPNVKSVLINIFGGITRCDDVARGLQEAFKTIKVDIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N ++G  ++ ++ L V  A  +D+A +  V A
Sbjct: 344 GTNEELGRAMLKDTPLTV--AQTMDEATELAVKA 375


>gi|256052164|ref|XP_002569646.1| succinyl-CoA synthetase beta chain [Schistosoma mansoni]
 gi|227284350|emb|CAY16894.1| succinyl-CoA synthetase beta chain, putative [Schistosoma mansoni]
          Length = 441

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/402 (38%), Positives = 233/402 (57%), Gaps = 17/402 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ K L+  + + V + V++ +    ++         YV+K+QI AGGRG G F+
Sbjct: 22  INLQEYQCKKLMLDHGINVQRFVLVRNPGEVDTTKHNFRVKEYVIKAQIPAGGRGMGVFR 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV +      +   + ++LG+ LITKQT  +G  V+ V V +  DI RE Y 
Sbjct: 82  D---GFKGGVHLTKDPDEMALIVSKMLGNHLITKQTTSSGILVSQVMVAEALDIHRETYF 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRTS     +A ++GGMDIEE+AK  P +I K  ID  +GVT +  +     L   
Sbjct: 139 AILMDRTSNSPIMVACSKGGMDIEELAKRCPSEIIKEPIDVTVGVTEDQASRFATALGFN 198

Query: 181 GQARI--DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              ++          LYK F   D   +E+NP    K+G++   D+K++FD NA+YR  +
Sbjct: 199 PHTQLYEQTCKQIQKLYKMFTALDCVQVEVNPFGETKDGQIVCFDAKLAFDQNAIYRQPE 258

Query: 239 IQELR------DVSEEDSR-----EIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDII 286
           + ++       +V+    +     E +A  + L+YI LD GNIGC+VNGAGLAMATMD+I
Sbjct: 259 VHKMALEVEAVEVAASGPKSAAALEADATHNGLNYIGLDDGNIGCIVNGAGLAMATMDLI 318

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
             + G PANFLD+GG     +V  AF I+  DS +  IL+NIFGGI+ C  + +G++SA+
Sbjct: 319 HYHHGKPANFLDLGGSVTTSQVEKAFHILARDSRIDCILVNIFGGIVNCKTIAEGLISAL 378

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           K   +NIP+V+RL+G N      LI++SGL +I    L++AA
Sbjct: 379 KNGIVNIPVVVRLQGNNAIEAQSLISDSGLELIAVNSLEEAA 420


>gi|119617914|gb|EAW97508.1| hCG1791842, isoform CRA_a [Homo sapiens]
          Length = 427

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/386 (39%), Positives = 221/386 (57%), Gaps = 4/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E Q+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 34  LSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  K GV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 94  ---SGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+D++      + S Q G+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 151 AILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA ++  DI 
Sbjct: 211 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L G  PA+FLD+G
Sbjct: 271 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AF + T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+ LE
Sbjct: 331 GGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLE 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  S L + +A+DL+D
Sbjct: 391 GTNVQEAQEIL-NSRLPITSAVDLED 415


>gi|33519793|ref|NP_878625.1| succinyl-CoA synthetase beta chain [Candidatus Blochmannia
           floridanus]
 gi|33504138|emb|CAD83400.1| succinyl-CoA synthetase beta chain [Candidatus Blochmannia
           floridanus]
          Length = 399

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/409 (40%), Positives = 245/409 (59%), Gaps = 23/409 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           MN++EYQAK L +++N+P+ K  +I+     +  I  +   GP ++VK QI +GG     
Sbjct: 1   MNLYEYQAKQLFKQFNIPILKNHIITETSEIKDCISEIIKEGPPWIVKCQIRSGG----- 55

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++ +S++ +++      G  L+T QT   G RVN + +E   +I  E 
Sbjct: 56  -----RGKSGGVQIVNSMEDMLAFANRWFGKNLVTYQTTVDGERVNSILIEPAVNIAHEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK---IFKLLIDPLIGVTSEDVASLCD 175
           YLS+L+DR    +  I ST+GG+DIE V  +       I+K+ IDPLIG  +     L  
Sbjct: 111 YLSILIDRDLSNIICIVSTKGGVDIENVIHESVSTSDVIYKISIDPLIGACAYQGRLLAS 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            L L G       D++ NL + F +KD++L+EINPLII KN  L  LD+K+S D NAL+R
Sbjct: 171 KLSLSGTQINQFTDMYINLVRMFIEKDLTLIEINPLIINKNNDLLCLDAKVSIDRNALFR 230

Query: 236 HLDIQEL--RDVSEEDSREIE---AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
            LD+  L  ++ +  D+  +    +K   ++Y+ALDGNIG +VNGAGLAMATMD+IKL+G
Sbjct: 231 QLDLVNLFLKNNNPNDNSHLPKLYSKYGGVNYVALDGNIGLLVNGAGLAMATMDLIKLFG 290

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV--KE 348
           G PANFLD+GG  +Q+ +  A K +    S+K I INIFGGI+ C ++   I+  +  + 
Sbjct: 291 GNPANFLDIGGDTNQESITEALKKLFKQESIKVIFINIFGGIVCCKLIADSIIHTLFDEH 350

Query: 349 VKINIPLVMRLEGANVDIG-NRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            ++NIP+V+RLEG N  +G ++LI  +  NVI   +L +A  KI+  VK
Sbjct: 351 TELNIPIVVRLEGNNAKMGIDKLINANFKNVIIINNLINAVHKIMELVK 399


>gi|307595219|ref|YP_003901536.1| succinyl-CoA synthetase subunit beta [Vulcanisaeta distributa DSM
           14429]
 gi|307550420|gb|ADN50485.1| succinyl-CoA synthetase, beta subunit [Vulcanisaeta distributa DSM
           14429]
          Length = 374

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 151/378 (39%), Positives = 228/378 (60%), Gaps = 21/378 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+ K LL KY V + +G ++ S++  +  + TL  PL+  K+Q+   GR K    
Sbjct: 1   MRLLEYKGKELLNKYGVKIPRGAIVKSLNDID-ILNTLKFPLFA-KAQVPFAGRAK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VR  +++K   +  R+ LG  +   Q  P    +  V  E+G ++ +ELY+
Sbjct: 55  ------MGLVRRVNTIKDAENAARDYLGKVI---QDYP----IRKVLFEEGVNVAKELYI 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     +AST+GG+DIEEVA+  P+KI +L ID   G+    +  +   L L+
Sbjct: 102 SITLDRENRGYLMLASTEGGIDIEEVARRSPEKIIRLYIDDYEGLRDYMIRGVAQKLGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   +   +Y+ F + D  L+EINPL +  +G+L  LD K+  DDN+LYRH DI 
Sbjct: 162 GSAAQDFVTVAKAMYRVFTEYDAELVEINPLALTTDGQLVALDVKVMIDDNSLYRHPDIS 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+  + E+EA+++ L Y+ L G +G M NGAGL MATMD++K +G  PA+FLDVG
Sbjct: 222 -IED-SDYTTEELEARKYGLHYVELTGYVGIMANGAGLTMATMDLVKEFGHEPADFLDVG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V    K++ +D  +K +LINIFGGI RCD + KG++ A+ EVK N P+ +RL+
Sbjct: 280 GGASKDAVREGLKMLLTDDRIKAVLINIFGGITRCDEVAKGVVEALNEVKTNKPIFIRLK 339

Query: 361 GANVDIGNRLIAESGLNV 378
           G N + G R++AE GL  
Sbjct: 340 GTNEEEGRRILAEIGLKT 357


>gi|205373359|ref|ZP_03226163.1| succinyl-CoA synthetase subunit beta [Bacillus coahuilensis m4-4]
          Length = 206

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/202 (61%), Positives = 162/202 (80%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           LY  F +KD S+ EINPL++  +G +  LD+K++FD NALYRH DI E RD+ EED++EI
Sbjct: 4   LYTVFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHKDILEYRDLDEEDAKEI 63

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           EA +++LSYI+L GNIGCMVNGAGLAMATMDIIK YGG PANFLDVGGGA  +KV  AFK
Sbjct: 64  EASKYDLSYISLFGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVGGGATAEKVTEAFK 123

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           II SD +VKGI +NIFGGIM+CD++  G++ A K+V++ +PLV+RLEG NVD+G ++++E
Sbjct: 124 IILSDENVKGIFVNIFGGIMKCDIIASGVVEAAKQVELTVPLVVRLEGTNVDLGKKILSE 183

Query: 374 SGLNVITAIDLDDAAQKIVHAV 395
           SGLN+I A  + D A+KIV  V
Sbjct: 184 SGLNIIAAESMADGAEKIVAQV 205


>gi|271962788|ref|YP_003336984.1| succinate--CoA ligase (ADP-forming) [Streptosporangium roseum DSM
           43021]
 gi|270505963|gb|ACZ84241.1| Succinate--CoA ligase (ADP-forming) [Streptosporangium roseum DSM
           43021]
          Length = 393

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 236/401 (58%), Gaps = 36/401 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QAK L  +Y +PV +GVV  +V  A +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQAKELFAEYGIPVPRGVVAHTVEEARAAAEQLTGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V            +ILG  +        G  V+ V +E+ + I  E Y 
Sbjct: 57  -------GGVKVADDAADAEQKATQILGMDI-------KGHTVHKVLIEEASAIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     I S  GGMDIEEVA   P+K+ K+ + PL GV   D A   ++ E  
Sbjct: 103 SFLLDRANRTFLAICSAAGGMDIEEVAHSAPEKVAKIPVSPLDGV---DRARAREIAEAG 159

Query: 181 GQ--ARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G   A +DG  +L   L+ AF D+D SL+E+NP+I+  +G+++ LD K++ DDNA++R  
Sbjct: 160 GLPVAALDGAAELIEKLWAAFVDEDASLVEVNPMILSADGQVKALDGKVTLDDNAVFRQS 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----- 292
           D     D   ED  E  AK  +L+Y+ LDG++G + NGAGL M+T+D++   G A     
Sbjct: 220 DHVAFEDKDAEDPLEAAAKAKDLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEAFPGQP 279

Query: 293 -PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLD+GGGA  + +AA  +II SD SVK I +N+FGGI  CD +  GI+SA + ++ 
Sbjct: 280 KPANFLDIGGGASAEVMAAGLEIIISDPSVKSIFVNVFGGITACDAVANGIVSAFQLLES 339

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDD 386
               ++ PLV+RL+G N ++G +++A++ L+ +  +D +DD
Sbjct: 340 RGEAVSRPLVVRLDGNNAELGRQILADAKLSGVELVDTMDD 380


>gi|11499768|ref|NP_071011.1| succinyl-CoA synthetase, beta subunit (sucC-2) [Archaeoglobus
           fulgidus DSM 4304]
 gi|6647836|sp|O28097|SUCC2_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-2;
           AltName: Full=Succinyl-CoA synthetase subunit beta-2;
           Short=SCS-beta-2
 gi|2648339|gb|AAB89066.1| succinyl-CoA synthetase, beta subunit (sucC-2) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 380

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 144/373 (38%), Positives = 225/373 (60%), Gaps = 21/373 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  K+ + VA+G + +SV       + L G + V+KSQ+  GGRGK    
Sbjct: 1   MRLHEYQAKQIFSKHGIRVARGELATSVEDVRGIAEELGGKV-VLKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   S++  +   +E+ GS L        G  V  +YVE+  ++ RE+Y 
Sbjct: 57  -------GGIKKAYSVEEAVEKAKEMFGSVL-------KGHIVEKIYVEEMIEVQREMYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR +  +A I S+ GGMDIEE+A  +P+KI ++ ++P  G+    +  L    ++ 
Sbjct: 103 GLTIDRANKGIAAILSSVGGMDIEEIAVKHPEKIARIAVNPKWGLWDYQIRELLLNSQMP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +   LY+     +  L+EINPL++  +G L   D++++ DD+AL+RH D++
Sbjct: 163 REYWKEVASILKTLYRIMVHYEAELVEINPLVVTPDG-LVAADARLNIDDSALFRHRDLE 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +E D  E  A +  L+Y+ LDGN+G + NGAG+AMATMD+I +YGG PANFLD+G
Sbjct: 222 KLRDYTEADQMERIAMEKGLNYVKLDGNVGVLANGAGMAMATMDLIYIYGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A  +I SD +VK + INIFGGI RCD + KG+  A+ +V  + P+V+RL 
Sbjct: 282 GGASAEVVREAINLILSDKNVKVVFINIFGGITRCDEVAKGLKEALADV--STPVVVRLA 339

Query: 361 GANVDIGNRLIAE 373
           G N + G +++ E
Sbjct: 340 GTNEEEGRKIMDE 352


>gi|121704545|ref|XP_001270536.1| succinyl-CoA synthetase beta chain [Aspergillus clavatus NRRL 1]
 gi|119398681|gb|EAW09110.1| succinyl-CoA synthetase beta chain [Aspergillus clavatus NRRL 1]
          Length = 385

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/387 (39%), Positives = 221/387 (57%), Gaps = 9/387 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L  Y++PV KG V+++   A S +  +  P  V+KSQI AGGRGKGRF    +D K G+R
Sbjct: 4   LISYSIPVPKGFVVTTPEDARSVVSLINAP-SVLKSQILAGGRGKGRFG---SDGKSGIR 59

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + ++      +  ++LG  L TKQT P G  V  +Y+    DI  E YL+L  DR     
Sbjct: 60  IVNTPNKAYENAAKMLGYYLTTKQTPPGGLLVKKLYIYKAVDIEHEFYLALTFDRERYCP 119

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             + S QGG+D+E  ++D   ++ K       GVT++ +  +   +            + 
Sbjct: 120 VILISDQGGVDVES-SQD---QLHKFWFSLSKGVTTDILTKIQREIHFTEAEMKTIQHIV 175

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             + K F +KD  LLE+NPL+    G    LD+K  FDD A +R  DI    +   +   
Sbjct: 176 QQMVKLFQEKDAILLELNPLVRTPKGTFVSLDAKFDFDDAARFRQPDIFSKEEYMPDQRD 235

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E EAK+H L YI LDGNIG +VNGAGLAMAT D+I L+GG  ANFLD+GG A  D +  A
Sbjct: 236 EYEAKEHGLVYIRLDGNIGNIVNGAGLAMATNDLINLHGGKSANFLDIGGKATTDTLLEA 295

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRL 370
           F+I+T D  V+ I INIFGGI+RCD++ + IL A   +    +P+V+RL+G N +   R+
Sbjct: 296 FEILTRDPRVQAIFINIFGGIVRCDMIAESILEAASVLGGFKVPVVVRLQGTNSEQALRM 355

Query: 371 IAESGLNVITAIDLDDAAQKIVHAVKG 397
           +AESG+++ T  D + AA+ I+    G
Sbjct: 356 LAESGVDIHTDTDFEGAARDIIRLASG 382


>gi|18044735|gb|AAH19868.1|AAH19868 Unknown (protein for IMAGE:4996134) [Homo sapiens]
          Length = 321

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 136/303 (44%), Positives = 189/303 (62%)

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DI
Sbjct: 7   KQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDI 66

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           EEVA   P+ IFK  ID   G+       + + L   G  +    D    LY  F   D 
Sbjct: 67  EEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDA 126

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI
Sbjct: 127 TQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYI 186

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ 
Sbjct: 187 GLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEA 246

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +AID
Sbjct: 247 ILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAID 306

Query: 384 LDD 386
           L+D
Sbjct: 307 LED 309


>gi|325969473|ref|YP_004245665.1| succinyl-CoA synthetase subunit beta [Vulcanisaeta moutnovskia
           768-28]
 gi|323708676|gb|ADY02163.1| succinyl-CoA synthetase, beta subunit [Vulcanisaeta moutnovskia
           768-28]
          Length = 374

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/382 (39%), Positives = 223/382 (58%), Gaps = 29/382 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+ K LL KY V + +G ++ S+   +  +K L  PL+  KSQ+   GR K    
Sbjct: 1   MRLLEYKGKELLNKYGVKIPRGAIVKSLDDVQ-VLKALKFPLFA-KSQVPFAGRAK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VR   ++K   +  R+ LG  +   Q  P    +  V  E+G ++ +ELY+
Sbjct: 55  ------MGLVRRVDTIKDAENAARDYLGKVI---QDYP----IRKVLFEEGVNVAKELYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     +AST+GG+DIEEVA+  P+KI +L ID   G+    +  +   L L+
Sbjct: 102 SITLDRENRGYLMLASTEGGIDIEEVARRSPEKIIRLYIDDYEGLRDYMIRGVAQKLGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   +   +Y+ F + D  L+EINPL +  +G+L  LD K+  DDN+L+RH DI 
Sbjct: 162 GSAAQDFATVAKAMYRVFTEYDAELVEINPLALTTDGQLVALDVKVMIDDNSLFRHPDI- 220

Query: 241 ELRDVSEEDS----REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
                S EDS     E+EA+++ L Y+ L G +G M NGAGL MATMD++K +G  PA+F
Sbjct: 221 -----SVEDSDYTMEELEARRYGLHYVELTGYVGIMANGAGLTMATMDLVKEFGHEPADF 275

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +D V    K++  D  +K +L+NIFGGI RCD + +G++ A+ EVK N P+ 
Sbjct: 276 LDVGGGASKDSVREGLKMLLMDDRIKAVLVNIFGGITRCDEVARGVVEALNEVKTNKPIF 335

Query: 357 MRLEGANVDIGNRLIAESGLNV 378
           +RL+G N + G R++ E GL  
Sbjct: 336 IRLKGTNEEEGRRILTEVGLKT 357


>gi|149238846|ref|XP_001525299.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450792|gb|EDK45048.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 313

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 196/309 (63%), Gaps = 2/309 (0%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +L   LITKQTG  G  V  VY+ +  D  +E Y+++L+DR       +AS+QGGMDIE 
Sbjct: 1   MLNHKLITKQTGAAGKEVTAVYIVERRDADKEAYVAILMDRAKQTPMIVASSQGGMDIEG 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           VA+  P  I K    PL    S+D A+ +  +L     A  +       L+K F ++D +
Sbjct: 61  VAEKDPSAI-KTFPVPLDANLSQDKATEIASVLGFSKDAIPEAAKTIQGLFKCFIERDCT 119

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
            +EINPL    + ++  +D+K+ FDDNA +R  ++   RD ++ED +E EA ++ L++I 
Sbjct: 120 QVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVYSWRDPTQEDPKEAEAAKYGLNFIK 179

Query: 265 LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
           LDGNI  +VNGAGLAMATMDIIKL GG PANFLD GG A  + +  AF++I SD  V GI
Sbjct: 180 LDGNIANIVNGAGLAMATMDIIKLNGGEPANFLDCGGTATPETIEKAFELILSDKKVNGI 239

Query: 325 LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
            +NIFGGI+RCD + KG+++A K  ++ IP+V+RL+G N+    +LI ESGL +    +L
Sbjct: 240 FVNIFGGIVRCDYVAKGLIAATKNFQLEIPVVVRLQGTNMAEAKKLIEESGLKLFAFENL 299

Query: 385 DDAAQKIVH 393
           D AA+KIV 
Sbjct: 300 DSAAEKIVE 308


>gi|313679917|ref|YP_004057656.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oceanithermus
           profundus DSM 14977]
 gi|313152632|gb|ADR36483.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oceanithermus
           profundus DSM 14977]
          Length = 377

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/372 (40%), Positives = 211/372 (56%), Gaps = 22/372 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK LL +Y VPV  G V      AE   K   G   V+K+Q+H GGRGK    
Sbjct: 1   MKLHEFQAKELLAQYGVPVPPGKVAYGPEEAERIAKDF-GKQVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++         + RE+ G  L     G T   V  V V +  DI RE Y 
Sbjct: 57  -------GGVKLAQP-----EEAREVAGKILGMDIKGLT---VKKVLVAEAVDIAREYYA 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+S     + S +GG+DIEEVA+  P+ I K  IDP  G+   +   +     L+
Sbjct: 102 GLIIDRSSQRAVLMVSKEGGVDIEEVARTNPEAIVKYPIDPHKGLRHFEAREVVKQAGLE 161

Query: 181 GQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G   R+   ++   LY AF   D SL EINPL++ + G +   D+KI  DDNAL+RH D+
Sbjct: 162 GNLNRL--ANVIVQLYNAFKGVDASLAEINPLVVTEQGEIIAADAKIDLDDNALFRHPDL 219

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LR+V  E   EIEA  +  +Y+ LDG++G + NGAGL M T+D++   GG PANFLD+
Sbjct: 220 AKLREVEAEHPLEIEASNYGFAYVKLDGDVGVIGNGAGLVMYTLDLVNRAGGKPANFLDI 279

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V  A K++  D  VKGI INIFGGI R D + KG++ A++E  + +P+VMR+
Sbjct: 280 GGGAKAEVVYNAVKLVAKDPDVKGIFINIFGGITRADEVAKGVIQALEEGLVKVPVVMRV 339

Query: 360 EGANVDIGNRLI 371
            G   +   +L+
Sbjct: 340 AGTAEEEAKKLL 351


>gi|135027|sp|P25126|SUCC_THETH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94732|pir||S15950 succinate-CoA ligase (ADP-forming) (EC 6.2.1.5) beta chain
           [validated] - Thermus aquaticus
 gi|48177|emb|CAA38006.1| succinate--CoA ligase (ADP-forming) [Thermus thermophilus]
 gi|227822|prf||1712304C succinyl CoA synthetase beta
          Length = 378

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/397 (38%), Positives = 218/397 (54%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L +Y VPV  G V  +   A+   +   G   V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEF-GKRVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G    +   +     L+
Sbjct: 103 GLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKRAGLE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH D+ 
Sbjct: 163 GNLN-KLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 222 ELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 282 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  V       +AA+ IV  V G
Sbjct: 342 GTAEEEAKKLL--EGKPVYMYPTSIEAAKAIVAMVGG 376


>gi|46198478|ref|YP_004145.1| succinyl-CoA synthetase beta chain [Thermus thermophilus HB27]
 gi|46196100|gb|AAS80518.1| succinyl-CoA synthetase beta chain [Thermus thermophilus HB27]
          Length = 391

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 146/371 (39%), Positives = 208/371 (56%), Gaps = 19/371 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQAK +L +Y VPV  G V  +   A+   +   G   V+K+Q+H GGRGK    
Sbjct: 14  LNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEF-GKRVVIKAQVHVGGRGKA--- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  L        G  V  V V +  DI +E Y 
Sbjct: 70  -------GGVKLADTPQEAYEKAQAILGMNL-------KGLTVKKVLVAEAVDIAKEYYA 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G    +   +     L+
Sbjct: 116 GLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKRAGLE 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH D+ 
Sbjct: 176 GNLN-KLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLA 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 235 ELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 295 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 354

Query: 361 GANVDIGNRLI 371
           G   +   +L+
Sbjct: 355 GTAEEEAKKLL 365


>gi|55980507|ref|YP_143804.1| succinyl-CoA synthetase subunit beta [Thermus thermophilus HB8]
 gi|55771920|dbj|BAD70361.1| succinyl-CoA synthetase beta chain [Thermus thermophilus HB8]
          Length = 391

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 145/371 (39%), Positives = 208/371 (56%), Gaps = 19/371 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQAK +L +Y VPV  G V  +   A+   +   G   V+K+Q+H GGRGK    
Sbjct: 14  LNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEF-GKRVVIKAQVHVGGRGKA--- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 70  -------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G    +   +     L+
Sbjct: 116 GLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKRAGLE 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH D+ 
Sbjct: 176 GNLN-KLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLA 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 235 ELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 295 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 354

Query: 361 GANVDIGNRLI 371
           G   +   +L+
Sbjct: 355 GTAEEEAKKLL 365


>gi|320449885|ref|YP_004201981.1| succinyl-CoA synthetase subunit beta [Thermus scotoductus SA-01]
 gi|320150054|gb|ADW21432.1| succinyl-CoA synthetase, beta chain [Thermus scotoductus SA-01]
          Length = 378

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 151/397 (38%), Positives = 220/397 (55%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L +Y VPV  G V  +   A+   + L G   V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILARYGVPVPPGKVAYTPDEAKRIAEEL-GKRVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G  + +   +     L+
Sbjct: 103 GLILDRAQKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRAFEAREMVKQAGLE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G++   D+KI  DDNAL+RH ++ 
Sbjct: 163 GNLN-KLAQVLVALYQAYEGVDASIAEINPLVVTTDGQIVAADAKIVLDDNALFRHPELM 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR++  E   E+EA  +  +Y+ L GNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 222 ELREIEAEHPLEVEASNYGFAYVKLQGNIGIIGNGAGLVMYTLDLVNRVGGRPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 282 GGAKAEVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   RL+   G  +       +AA+ IV  V G
Sbjct: 342 GTAEEEAKRLL--EGRPIYMYPTSIEAAKAIVAMVGG 376


>gi|114587762|ref|XP_001134813.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 313

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 136/301 (45%), Positives = 187/301 (62%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DIEE
Sbjct: 1   MIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEE 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA   P+ IFK  ID   G+       + + L   G  +    D    LY  F   D + 
Sbjct: 61  VAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFIGPLKSQAADQITKLYNLFLKIDATQ 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI L
Sbjct: 121 VEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ IL
Sbjct: 181 DGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +AIDL+
Sbjct: 241 VNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLE 300

Query: 386 D 386
           D
Sbjct: 301 D 301


>gi|94502252|ref|ZP_01308737.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           str. Hc (Homalodisca coagulata)]
 gi|161833698|ref|YP_001597894.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           GWSS]
 gi|94451190|gb|EAT14130.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           str. Hc (Homalodisca coagulata)]
 gi|152206188|gb|ABS30498.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           GWSS]
          Length = 391

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/403 (39%), Positives = 230/403 (57%), Gaps = 24/403 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGV----VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQAK +L  + V V   +    +  +V+AA+   K     + V+K+QIHAG    
Sbjct: 1   MNLHEYQAKKILATFGVKVPYSINALNIEETVYAAKKVFKKTKEYICVIKAQIHAG---- 56

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED---GAD 113
                      GG+++   +  V     +ILG  L+T QT   G  VN V + +     +
Sbjct: 57  ------GRGKGGGIKISKYIDDVYKKSSKILGRRLVTNQTNNKGKIVNKVLISEYVFNTE 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E Y+S+  DR       + S +GG++IE  +K   +KIF   IDP IG+    +  +
Sbjct: 111 KENEYYISIFYDRNIYQNRILYSKEGGLEIE--SKYRYKKIFLQKIDPYIGIQDFLIRKI 168

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L+++  A I       N+Y A+   D SLLEINP+ I KN  +  +D+K+  DDNAL
Sbjct: 169 AFNLKIKYSAFIRFKTFIRNIYNAYIYSDASLLEINPVFITKNNEILAIDAKVILDDNAL 228

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH+D +E+ D  E D  E+EAK+  L+Y+ LDG + CMVNGAGLAM+TMD+IKLYG  P
Sbjct: 229 FRHMDYKEMYDEKEYDLIELEAKKAGLNYLKLDGEVACMVNGAGLAMSTMDMIKLYGANP 288

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GG AD   +   F II  D  VK ILINIFGGI+RCD++ +GI++   +  IN 
Sbjct: 289 ANFLDLGGKADSKCIKKGFDIILKDKKVKIILINIFGGIVRCDIVAEGIINYFNK-SINK 347

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT----AIDLDDAAQKIV 392
            +++RLEG NV++  +LI  S   +         L++AA KI+
Sbjct: 348 KIILRLEGTNVNLAKKLINNSNSIINNSIIYVTSLEEAANKII 390


>gi|218296426|ref|ZP_03497169.1| succinyl-CoA synthetase, beta subunit [Thermus aquaticus Y51MC23]
 gi|218243220|gb|EED09751.1| succinyl-CoA synthetase, beta subunit [Thermus aquaticus Y51MC23]
          Length = 378

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/397 (38%), Positives = 218/397 (54%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L +Y VPV  G V  +   A+   +   G   V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILARYGVPVPPGRVAYTPEEAKRIAEEF-GKRVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +        + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLADTPAEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+   V  + S +GG+DIEEVA   P+ I K  IDP  G+   +   +     L+
Sbjct: 103 GLILDRSKKRVVLMLSKEGGVDIEEVAAQRPEAIHKFWIDPHKGLRPFEAREMVRRAGLE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH ++ 
Sbjct: 163 GNLN-KLAQVLVALYRAYEGVDASIAEINPLVVTTDGAIVAADAKIVLDDNALFRHPELA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 222 ELREVEAEHPLEVEASNYGFAYVKLDGNIGVIGNGAGLVMYTLDLVNRVGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 282 GGAKADVVYNALKLVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  +       +AA+ IV  V G
Sbjct: 342 GTAEEEAKKLL--EGKPIYMYPTSIEAAKAIVAMVGG 376


>gi|293977808|ref|YP_003543238.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           DMIN]
 gi|292667739|gb|ADE35374.1| succinyl-CoA synthetase, beta subunit [Candidatus Sulcia muelleri
           DMIN]
          Length = 392

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/377 (40%), Positives = 218/377 (57%), Gaps = 20/377 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGV----VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQAK +L  + V V   +    +  +V+AA+   K     + V+K+QIHAG    
Sbjct: 1   MNLHEYQAKKILATFGVKVPYSINALNIEETVYAAKKVFKKTKEYICVIKAQIHAG---- 56

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED---GAD 113
                      GG+++   +  V      ILG  L+T QT   G  VN V + +     +
Sbjct: 57  ------GRGKGGGIKISKYIDDVYKKSSNILGRRLVTNQTNNKGKIVNKVLISEYVFNTE 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E Y+S+  DR       + S +GG++IE  +K   +KIF   IDP IG+    +  +
Sbjct: 111 KENEYYISIFYDRNIYKNRILYSKEGGLEIE--SKYRYKKIFFQKIDPYIGIQDFLIRKI 168

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L+++  A I       N+Y A+   D SLLEINP+ I KN  +  +D+K+  DDNAL
Sbjct: 169 AFNLKIKYSAFIRFKTFIRNIYNAYIYSDASLLEINPVFITKNNEILAIDAKVILDDNAL 228

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH+D +E+ D  E D  E+EAK+  L+Y+ LDG + CMVNGAGLAM+TMD+IKLYG  P
Sbjct: 229 FRHMDYKEMYDEKEYDLIELEAKKAGLNYLKLDGEVACMVNGAGLAMSTMDMIKLYGANP 288

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GG AD   +   F II  D  VK ILINIFGGI+RCD++ +GI++   +  IN 
Sbjct: 289 ANFLDLGGKADSKCIKKGFDIILKDKKVKIILINIFGGIVRCDIVAEGIINYFNK-SINK 347

Query: 354 PLVMRLEGANVDIGNRL 370
            +++RLEG NV++  +L
Sbjct: 348 KIILRLEGTNVNLAKKL 364


>gi|298244136|ref|ZP_06967942.1| succinyl-CoA synthetase, beta subunit [Ktedonobacter racemifer DSM
           44963]
 gi|297551617|gb|EFH85482.1| succinyl-CoA synthetase, beta subunit [Ktedonobacter racemifer DSM
           44963]
          Length = 380

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 149/395 (37%), Positives = 221/395 (55%), Gaps = 20/395 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L +Y +PV  G V  +   AE+  + L GP+ V+K+Q++ GGRGK    
Sbjct: 1   MKIHEYQAKEVLARYGIPVQPGKVAHTPEEAETIARELDGPV-VIKAQVYVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + +   +    +LG  +        G  V+ V V    DI  E YL
Sbjct: 57  -------GGIQFGDTPEEARASAARVLGMNI-------KGLTVDKVLVTSKIDIKEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR S     + S +GG+DIEEVA  +P+KI K  ID   G+   +  ++     L 
Sbjct: 103 GIVHDRKSQTPVVMVSKEGGIDIEEVAATHPEKIIKYPIDMHWGLRPFEALNIVTEAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A      +  NL KA+   D  L EINPL +  +G++   D+KI  DDNALYR  +I 
Sbjct: 163 TKALRPAAAILANLAKAYIGSDAQLAEINPLALTADGKVMAADAKILIDDNALYRQKEIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              +  + +  E EAKQ  L+Y+ LDG++G + NGAGL M T+D++   GG PANFLD+G
Sbjct: 223 SWSEPEDANPIEFEAKQAGLTYVKLDGDVGIIGNGAGLVMTTLDMVARSGGKPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  A   +  D  VKGIL+NIFGGI R + + +G++ A  E+   +P+V+RL 
Sbjct: 283 GGAKAEVMYKALTFVARDPQVKGILVNIFGGITRGEEVARGVIMAQGELPKGMPIVVRLS 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G   + G  L+ ++GL+     D+ D+AQKIV A+
Sbjct: 343 GTGAEEGRALLKDAGLD--WGQDMRDSAQKIVAAI 375


>gi|296268640|ref|YP_003651272.1| succinyl-CoA synthetase subunit beta [Thermobispora bispora DSM
           43833]
 gi|296091427|gb|ADG87379.1| succinyl-CoA synthetase, beta subunit [Thermobispora bispora DSM
           43833]
          Length = 393

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/398 (37%), Positives = 230/398 (57%), Gaps = 31/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QAK L  +Y +PV +G+V  +   A +A +TL G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQAKELFAEYGIPVPRGIVAHTAEEARAAAETLTGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++           ++ILG  +        G  V  V VE+ + I  E Y 
Sbjct: 57  -------GGVKLADGPDDAYEKAQQILGMDI-------KGHTVRKVLVEEASQIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     I S  GGMDIEEVA+  P+K+ K+ IDPL GV       +     L 
Sbjct: 103 SFLLDRANRTFLSICSAAGGMDIEEVARQTPEKVAKVPIDPLTGVDRAKAREIAIAGGLP 162

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A +DG  D+   L+  F D+D +L+E+NP+I+  +G +R +D K++ DDNAL+R  D 
Sbjct: 163 ERA-LDGAVDIIEKLWAVFVDEDATLVEVNPMILTVDGAVRAIDGKVTLDDNALFRQPDH 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA------P 293
           Q+  D + ED  E  AK+ +L+Y+ LDG++G + NGAGL M+T+D++   G +      P
Sbjct: 222 QKYVDKAAEDPLEARAKELDLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGESFPGQPKP 281

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--- 350
           ANFLD+GGGA  + +A   +II SD SVK + +N+FGGI  CD +  GI+SA K ++   
Sbjct: 282 ANFLDIGGGASAEVMANGLQIILSDPSVKSVFVNVFGGITACDAVANGIVSAFKLLESRG 341

Query: 351 --INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
             +  PLV+RL+G N  +G +++ ++ L  +  +D  D
Sbjct: 342 EAVTRPLVVRLDGNNAALGRKILTDAALPGVELVDTMD 379


>gi|86739364|ref|YP_479764.1| succinyl-CoA synthetase subunit beta [Frankia sp. CcI3]
 gi|123765273|sp|Q2JFA7|SUCC_FRASC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|86566226|gb|ABD10035.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Frankia sp.
           CcI3]
          Length = 388

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 225/393 (57%), Gaps = 26/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G   ++   A  AI T  G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKKLFAEHGVPVPTGKTATTPEEAR-AIATELGGRVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V        +    ILG  +        G  V+ V VE+ ++I  E Y 
Sbjct: 57  -------GGVKVADGPDDAFAKATAILGMDI-------KGHTVHSVLVEEASNIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + ++ IDPL GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATKPEALARIAIDPLKGVDAAKAREIAVAAKLP 162

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A +DG  +L   L+  F   D +L+E+NPLI+  +GR+  LD K+S DDNA +RH + 
Sbjct: 163 -EAALDGASELLAKLWTVFVKSDATLVEVNPLILTGDGRVVALDGKVSLDDNADFRHPEH 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
           +   DV+  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++      +GG  PA
Sbjct: 222 EAFVDVAAVDPLEQKAKEKGLNYVKLEGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINI 353
           NFLD+GGGA  + +A    II  D +VK + +NIFGGI  CD +  GI+ A+K V  ++ 
Sbjct: 282 NFLDIGGGASAEVMANGLSIILGDPAVKSVFVNIFGGITSCDAVANGIVQALKIVGDVST 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G N + G R++AE+ L V+  +D  D
Sbjct: 342 PLVVRLDGNNAEEGRRILAEANLPVVKPVDTMD 374


>gi|328950885|ref|YP_004368220.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451209|gb|AEB12110.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinithermus
           hydrothermalis DSM 14884]
          Length = 377

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/371 (40%), Positives = 206/371 (55%), Gaps = 20/371 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +L +Y VPV  G V  +   A+   K   G   V+K+Q+H GGRGK    
Sbjct: 1   MKLHEYQAKEILARYGVPVPPGKVAYTPEEADRIAKEF-GKTVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++         + +E+ G  L     G T   V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLAEP-----HEAKEVAGRILGMNIKGLT---VKKVLVAEAVDIAKEYYA 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  V  + S +GG+DIEEVA   P+ I K  IDP  G+   +   +     L+
Sbjct: 102 GLILDRASQRVVLMVSKEGGVDIEEVAARNPEAIIKYPIDPHKGLRPFEAREIVKRAGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY A+   D  L EINPL++  +G++   D+KI  +DNALYRH D+ 
Sbjct: 162 GNLNKLAAVLV-QLYNAYVGVDAFLAEINPLVVTTDGQIVAADAKIDLEDNALYRHPDLA 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   EIEA  +  +Y+ LDG++G + NGAGL M T+D++   GG PANFLD+G
Sbjct: 221 ELREVEAEHPLEIEASNYGFAYVKLDGDVGIIGNGAGLVMYTLDLVNRAGGKPANFLDIG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKGI INIFGGI R D + KG++ A++E  +  P+ MR+ 
Sbjct: 281 GGAKADVVYNAVKLVARDPDVKGIFINIFGGITRADEVAKGVIRALEEGLLTKPVAMRVA 340

Query: 361 GANVDIGNRLI 371
           G   +   RL+
Sbjct: 341 GTAEEEAKRLL 351


>gi|72162976|ref|YP_290633.1| succinyl-CoA synthetase subunit beta [Thermobifida fusca YX]
 gi|71916708|gb|AAZ56610.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermobifida
           fusca YX]
          Length = 410

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/399 (37%), Positives = 227/399 (56%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           +++ EYQAKAL  +Y VPV +G V S+   V A          P  VVK+Q+  GGRGK 
Sbjct: 18  VDLFEYQAKALFAEYGVPVPQGKVASTPEEVRAIAEEFAAAGKPRVVVKAQVKTGGRGKA 77

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V       ++  ++ILG  +        G  V+ V VE+ +DI  E
Sbjct: 78  ----------GGVKVADGPDDAVAKAKQILGMDI-------KGHTVHRVLVEEASDIAEE 120

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S L+DR +     I S +GGM+IEEVA   P  + K+ I PL G  ++  A +    
Sbjct: 121 YYFSFLLDRANRSFLSICSAEGGMEIEEVAATNPDAVAKVPISPLKGAPADVAADIVAQG 180

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L   A     D+   L+K F +KD +L+E+NPLI+ K+GR+  LD K++ DDNA +R  
Sbjct: 181 KLPEAAAQGAVDVITKLWKVFVEKDATLVEVNPLILTKDGRVVALDGKVTLDDNAEFRQ- 239

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA- 292
           D++ L   +E D  E++AK+  L+Y+ LDG +G + NGAGL M+T+D++    + +GG  
Sbjct: 240 DLESLASAAEGDPLEVKAKEKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEQHGGVK 299

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-- 350
           PANFLD+GGGA  + +A   +II SD +VK + +N+FGGI  CD +  GI+ A++ ++  
Sbjct: 300 PANFLDIGGGASAEVMANGLEIILSDPAVKSVFVNVFGGITACDAVANGIVQALELLESR 359

Query: 351 ---INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              +  PLV+RL+G N ++G  ++ E     +  +D  D
Sbjct: 360 GEDVTKPLVVRLDGNNAELGRSILNERNHPAVRQVDTMD 398


>gi|329945409|ref|ZP_08293172.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328529031|gb|EGF55962.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 401

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/405 (35%), Positives = 236/405 (58%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARDLFRQHGVPVLNGAVATTPEEARSAAQSLLDAGSDLVVVKAQVKTGGRGK- 59

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +++   +  R+ILG  +        G  V  V + DG D+  E
Sbjct: 60  ---------AGGVKLARTVEEAEARARDILGMDI-------KGHTVRAVLISDGVDLDAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DRT      + S +GGMDIE +A + P+ + ++ IDPL GVT      + +  
Sbjct: 104 YYFSILLDRTERQYLAMCSREGGMDIETLAAERPEALARVGIDPLEGVTPAVAHRIVEAA 163

Query: 178 ELQGQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             +  A  D    +   L++ F  +D +L+E+NPL+   +GR+  LD K++ DDN+ +RH
Sbjct: 164 GFEAGALADEVAAVIERLWEVFTAEDATLVEVNPLVKATDGRIIALDGKVTLDDNSRFRH 223

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGG- 291
               EL D +  D  E  A++  L+Y+ L+G +G + NGAGL M+T+D++    + +GG 
Sbjct: 224 PAHAELVDNAATDPLEARAREAGLNYVRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGM 283

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  CD + +GI++AV+ +  
Sbjct: 284 KPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITSCDTVAQGIVTAVESLGG 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +  P+V+RL+G N + G  ++A++ +  +T +D  D A  +V A+
Sbjct: 344 LPKPVVVRLDGNNAETGRAILADAAIEGVTVVDTMDGAADVVTAI 388


>gi|331667094|ref|ZP_08367959.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
 gi|331065450|gb|EGI37343.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
          Length = 253

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/252 (53%), Positives = 181/252 (71%)

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +A++ P  I K+ +DPL G        L   L L+G+       +F  L   F ++D++L
Sbjct: 1   MAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLAL 60

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINPL+I K G L  LD K+  D NAL+R  D++E+RD S+ED RE +A Q  L+Y+AL
Sbjct: 61  IEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVAL 120

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVGGGA +++V  AFKII SD  VK +L
Sbjct: 121 DGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVL 180

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLEG N ++G + +A+SGLN+I A  L 
Sbjct: 181 VNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLT 240

Query: 386 DAAQKIVHAVKG 397
           DAAQ++V AV+G
Sbjct: 241 DAAQQVVAAVEG 252


>gi|291295751|ref|YP_003507149.1| succinyl-CoA synthetase subunit beta [Meiothermus ruber DSM 1279]
 gi|290470710|gb|ADD28129.1| succinyl-CoA synthetase, beta subunit [Meiothermus ruber DSM 1279]
          Length = 378

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 204/364 (56%), Gaps = 25/364 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L KY +PV  G +  +   A+  I +  G L V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILAKYGIPVPPGKIAFTADEAKQ-IASEYGDLVVIKAQVHTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILG---STLITKQTGPTGSRVNCVYVEDGADILRE 117
                  GGV++  + +       +ILG   +  ITK+          V V  G  I +E
Sbjct: 57  -------GGVKLARTPEEAREKATQILGLNINGFITKK----------VLVAKGLHIAKE 99

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y  +++DR S  V  + S +GG+DIEEVA   PQ + K  IDP  G+   +   L    
Sbjct: 100 YYAGMILDRVSQRVVLMLSKEGGVDIEEVAATRPQALIKYPIDPHKGLRPFEARELVKRA 159

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            ++G       D+   LY+A+   D S  EINPL+I  +G +   D+KI  DDNALYRH 
Sbjct: 160 GMEGNLN-KLADVLVKLYQAYVGIDASTAEINPLVITDSGEVVAADAKIVLDDNALYRHP 218

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+  LR+   E   E+EA  +  SY+ LDGNIG + NGAGL M T+D+++  GG  ANFL
Sbjct: 219 DLTPLREFEAEHPLEVEASNYGFSYVKLDGNIGVIGNGAGLVMYTLDLVQRCGGKAANFL 278

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A+ E  +  P+ M
Sbjct: 279 DIGGGAKADIVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALDEGLLTKPVAM 338

Query: 358 RLEG 361
           R+ G
Sbjct: 339 RVAG 342


>gi|227498128|ref|ZP_03928301.1| succinyl-CoA synthetase subunit beta [Actinomyces urogenitalis DSM
           15434]
 gi|226832464|gb|EEH64847.1| succinyl-CoA synthetase subunit beta [Actinomyces urogenitalis DSM
           15434]
          Length = 406

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 143/405 (35%), Positives = 230/405 (56%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L  K+ VPV  G + ++   AE     L      L VVK+Q+  GGRGK 
Sbjct: 4   MDLYEYQARELFAKHGVPVLGGQIATTPEQAEQVATELLNCGTDLLVVKAQVKTGGRGKA 63

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S          ILG  +        G  V  V + +GADI  E
Sbjct: 64  ----------GGVKLARSAAEARQHAEAILGMEI-------KGHTVRTVLISEGADIDSE 106

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR       + S +GGM+IE +AK+ P+ + ++ +DP+ G+T E  A +    
Sbjct: 107 FYFSILLDRAERRYLAMCSREGGMEIETLAKERPEALARVAVDPIEGITPEVAARITAEA 166

Query: 178 ELQGQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             +  A  D    +   L++ F  +D +L+E+NPL++  +G +  LD K+S DDNA +RH
Sbjct: 167 GFEPGAVADAVAQVIGRLWEVFTAEDATLVEVNPLVLTPSGTVLALDGKVSLDDNASFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA 292
            +   L+D S  D  E  AK+  L+Y+ L G +G + NGAGL M+T+D++    + +GG 
Sbjct: 227 PEHAALKDTSAADPLETRAKEAGLNYVRLTGEVGVLGNGAGLVMSTLDVVAGAGERHGGM 286

Query: 293 -PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  CD +  GI++AV  ++ 
Sbjct: 287 RPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITSCDTVANGIVTAVSTLED 346

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            + P+V+RL+G N  +G +++AE+ ++ +T +D  D A  +V A+
Sbjct: 347 FDKPIVVRLDGNNAALGRQILAEAAIDGVTVVDTMDGAADVVTAL 391


>gi|269218840|ref|ZP_06162694.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269211951|gb|EEZ78291.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 403

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 227/395 (57%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++++EYQA+ L   + VPV+ G+V S+   AESA + L G L VVK+Q+  GGRGK    
Sbjct: 13  VDLYEYQARELFEAHGVPVSAGIVASTPQEAESAARELGGGLVVVKAQVKTGGRGKA--- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       EILG  +        G +V  V V  GADI RE Y 
Sbjct: 70  -------GGVKLARSPQEAADRAEEILGMDI-------KGHKVRRVLVASGADIAREFYF 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
           S+L+DR+      + S  GGMDIE +AK+ P+ + K+ +DP +G+    + ++AS     
Sbjct: 116 SVLLDRSERRYLAMCSVDGGMDIETLAKERPEALAKVAVDPNVGIDEAKAREIASAAGFD 175

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              G+  +    +   L+  +  +D +L+E+NPL++ + G +  LD K++ DDNA +RH 
Sbjct: 176 AETGEKAVP---VLLKLWDVYSGEDATLVEVNPLVLTEQGEIVALDGKVTLDDNARFRHS 232

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAP 293
             + L D + ED  E +AK   L+Y+ LDG +G + NGAGL M+T+D++      YG  P
Sbjct: 233 GHEALVDKAAEDPLEAKAKALGLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEEYGVGP 292

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KI 351
           ANFLD+GGGAD + ++    +I  D  V+ + +N+FGGI  CD + KGI++A+  +    
Sbjct: 293 ANFLDIGGGADANVMSNGLAVILGDPDVRSVFVNVFGGITACDEVAKGIVAALDALGEAA 352

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           + P+V+RL+G  V  G  ++A++   ++T +D  D
Sbjct: 353 SKPIVVRLDGNAVAEGRAILAQANHPLVTLVDTMD 387


>gi|288921662|ref|ZP_06415931.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EUN1f]
 gi|288346931|gb|EFC81239.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EUN1f]
          Length = 388

 Score =  255 bits (651), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 150/392 (38%), Positives = 219/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G V ++   A   I T  G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKKLFAEHGVPVPTGKVATTPQQARE-IATELGGKVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    +        ILG  +        G  V+ V VE+ +DI  E Y 
Sbjct: 57  -------GGVKVADGPEDAYEKASAILGMDI-------KGHTVHSVLVEEASDIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P  + ++ IDPL GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATNPAALARIHIDPLTGVDAAKAREIAVAAKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   L+K F   D +L+E+NPLI+  +GR+  LD K++ D+NA +RH +  
Sbjct: 163 DAALDGASTLLAKLWKVFVKSDATLVEVNPLILTGDGRVVALDGKVTLDENADFRHPENA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           +L DV+  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 DLVDVAAVDPLEQKAKEKGLNYVKLEGQVGIIGNGAGLVMSTLDVVTYAGEEFGGQKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIP 354
           FLD+GGGA  + +A    II  D SVK + +NIFGGI  CD +  GI+ A+  V  +  P
Sbjct: 283 FLDIGGGASAEVMANGLSIILGDPSVKSVFVNIFGGITACDAVANGIIQALDIVGNVTTP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G N + G R++ E+ L+V+  +D  D
Sbjct: 343 LVVRLDGNNAEEGRRILKEANLSVVKPVDTMD 374


>gi|261884695|ref|ZP_06008734.1| succinyl-CoA synthetase subunit beta [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 301

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/285 (47%), Positives = 184/285 (64%), Gaps = 4/285 (1%)

Query: 106 VYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           +Y+E G +I +E YLSL  DR +  +A IAS  GGM+IEEV  D   KI  + IDP IG+
Sbjct: 12  LYIEKGTNIDKEYYLSLTFDRINECIAVIASADGGMNIEEVDHD---KIITIRIDPQIGL 68

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
                 ++ D L L     +    L   LY+ +   D +L+EINPL++ K   L  LD+K
Sbjct: 69  RDFHSLAIADFLNLDKDLSVKLHVLLSKLYRLYWQTDSNLVEINPLVLTKENDLIPLDAK 128

Query: 226 ISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDI 285
           + FDD+AL+R   I  +RD+ EE+  E++AK + LSY+ LDGNIGCMVNGAGLAM TMD 
Sbjct: 129 MGFDDSALFRQEQIAIMRDIDEEEPSELDAKTYGLSYVKLDGNIGCMVNGAGLAMGTMDT 188

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
           I   GG PANFLDVGGGA+   VA AF+II  D +VK I +NIFGGI+RCD +  GIL A
Sbjct: 189 INGVGGKPANFLDVGGGANPQTVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIANGILEA 248

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQ 389
            K  K+ +P+++RL+G N      ++ ++ + N+I+A DL+  A+
Sbjct: 249 TKLTKVEVPVIVRLDGTNAKEAAEILKQANITNIISAPDLESGAK 293


>gi|312797176|ref|YP_004030098.1| succinyl-CoA synthetase beta chain [Burkholderia rhizoxinica HKI
           454]
 gi|312168951|emb|CBW75954.1| Succinyl-CoA synthetase beta chain (EC 6.2.1.5) [Burkholderia
           rhizoxinica HKI 454]
          Length = 234

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/218 (55%), Positives = 167/218 (76%), Gaps = 6/218 (2%)

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           Q +A + G      LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I
Sbjct: 22  QARANLHG------LYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHSEI 75

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDV
Sbjct: 76  VAYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDV 135

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  +KV  AFK++  + ++K IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R+
Sbjct: 136 GGGATTEKVTEAFKLMLKNPNLKAILVNIFGGIMRCDVIAEGVIAASKAVHLQVPLVVRM 195

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +G N D+G +++A+SGL +I+A  +++AAQK+V A +G
Sbjct: 196 KGTNEDLGKKMLADSGLPIISADSMEEAAQKVVAAAEG 233


>gi|209885686|ref|YP_002289543.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
 gi|209873882|gb|ACI93678.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
          Length = 390

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/399 (35%), Positives = 224/399 (56%), Gaps = 23/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  Y +P   G V  +   A +    L G    VK+Q+HAGGR +    
Sbjct: 1   MNLHEFQAKQILAGYGLPSPGGKVAITAEQAVAIYNELGGGDMAVKAQVHAGGRAQA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S K   +    +LG  L+T QTGP G  V  +Y+E   + +REL++
Sbjct: 58  -------GGVKIVHSEKEAKAVATSLLGKKLVTAQTGPAGRVVRRIYLEKAVEPVRELHV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+D +SG +    S +GG DIEE A     ++ +L +       +++VA+    +   
Sbjct: 111 ALLIDGSSGTLTLFGSARGGDDIEERAARGELRLERLSLGDGSKRQADNVAAFATRI--- 167

Query: 181 GQARIDGGD------LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
              RID G       +   L +AF D D SL+EINPL I+++G  + LD K+  +DNAL+
Sbjct: 168 ---RIDAGSVAAFEKIVDGLRRAFVDLDASLIEINPLAILRDGSFQALDVKMVLEDNALF 224

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           RH D+  LRD  E D RE+EA++H L+++++DGNIG + NGAGL +A++D++   GG PA
Sbjct: 225 RHPDLTALRDEDEIDHREVEAQRHQLNFVSMDGNIGVVANGAGLGLASVDLVCAAGGKPA 284

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR-CDVLVKGILSAVKEVKINI 353
           NF+D+   A    VA  F ++  + + + I +N+ GG M+ CD + +G+  A++    ++
Sbjct: 285 NFMDIRTTATSLDVAYGFGLLLDNPATRAIFLNVHGGGMQPCDTIAEGLGIAMRRTGRSL 344

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           P+V RL G N +         G  V+   D+  AA K+V
Sbjct: 345 PIVARLAGNNAEFARSRFVNFGCPVVDCPDMWTAATKVV 383


>gi|289641099|ref|ZP_06473267.1| succinyl-CoA synthetase, beta subunit [Frankia symbiont of Datisca
           glomerata]
 gi|289509040|gb|EFD29971.1| succinyl-CoA synthetase, beta subunit [Frankia symbiont of Datisca
           glomerata]
          Length = 388

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 222/393 (56%), Gaps = 26/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L   + VPV  G V ++   A   I T  G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKKLFADHGVPVPSGKVATTPDEARG-IATDLGGRVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V        +    ILG  +        G  V+ V VE  +DI  E Y 
Sbjct: 57  -------GGVKVADGPDDATARASAILGMDI-------KGHTVHSVLVEQASDIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+ + ++ IDPL+GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMCSREGGMEIEEVAATKPEALARIPIDPLVGVDATIARQIAVAAKLP 162

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A +DG  +L   L++ F   D +L+E+NPLI+  +GR+  LD K+S D+NA +RH D 
Sbjct: 163 -EAALDGATELLVKLWEVFVRADATLVEVNPLILTGDGRVVALDGKVSLDENASFRHSDH 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
               DV+  D  E  AK+ +L+Y+ L G +G + NGAGL M+T+D++      +GG  PA
Sbjct: 222 AAFVDVAAVDPLEQRAKEKDLNYVKLSGQVGIIGNGAGLVMSTLDVVTYAGEEFGGQRPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINI 353
           NFLD+GGGA  + +A    II SD +VK + +NIFGGI  CD +  GI+ A+K V  I  
Sbjct: 282 NFLDIGGGASAEVMADGLSIILSDPAVKSVFVNIFGGITACDAVANGIVQALKIVGDITT 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G N + G R++ E+ L+V+  +D  D
Sbjct: 342 PLVVRLDGNNAEEGRRILREANLDVVKPVDTMD 374


>gi|156936881|ref|YP_001434677.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ignicoccus
           hospitalis KIN4/I]
 gi|189030247|sp|A8A8L8|SUCC_IGNH4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|156565865|gb|ABU81270.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ignicoccus
           hospitalis KIN4/I]
          Length = 376

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/396 (37%), Positives = 225/396 (56%), Gaps = 22/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EY+AKA+ +KY +P  +GV+I        A++ L  P+ V+K+Q+   GRGK    
Sbjct: 1   MNLLEYEAKAIAKKYGIPTPEGVLIERPEQVNEAVEKLGLPV-VLKAQVPVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++       +      L   L +K+    G  V  + VE   +I +ELYL
Sbjct: 57  -------GGVKLARDPDEALE-----LAEELFSKEI--KGFPVLSLLVEKAENIQKELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DRT+  V  +AS +GGM+IEE+AK+ P  I KL I+P +G+ + +   +   + L 
Sbjct: 103 SFTIDRTNRKVVMLASAEGGMEIEELAKEKPDAIVKLPIEPEVGLKAHEAREVGKRIGLS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       +   +YK F D D  L+E NPL I   G L  LD ++  DDNA++RH +++
Sbjct: 163 GQLLRQFEGIAKTMYKIFEDYDAELVESNPLAITDRG-LVALDFRMIVDDNAIFRHPELE 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             R+  E    E EA +    Y+ LDG+IG + NGAGL MATMD++  YGG PANFLD+G
Sbjct: 222 ASRE-RELSELEKEAARWGFFYVELDGDIGIIGNGAGLTMATMDVVNYYGGRPANFLDIG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+V AA  ++  +  VK I +NIFGGI     + +GI+ A+ E  +  P+V R+ 
Sbjct: 281 GGARRDRVKAAVNVLLKNPKVKVIFVNIFGGITLASEVAQGIVDALSESNVKKPIVARIV 340

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G   + G +++ E+G+ +  +  +D+AAQ+ V   K
Sbjct: 341 GTAEEEGKKILKEAGIPLFES--MDEAAQEAVKLAK 374


>gi|296242753|ref|YP_003650240.1| succinyl-CoA synthetase subunit beta [Thermosphaera aggregans DSM
           11486]
 gi|296095337|gb|ADG91288.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermosphaera
           aggregans DSM 11486]
          Length = 376

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 145/399 (36%), Positives = 228/399 (57%), Gaps = 26/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY++K + RKY V   +GV+ SS   A  A +       V+KSQ+  GGRG     
Sbjct: 1   MKLYEYESKDIARKYGVQTPRGVLASSPEEALRAAEEFGA--VVLKSQVLVGGRGLA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    S        +E+LG  +        G RV  + VE+   + RE Y+
Sbjct: 56  -------GGILKAESPAEAYMKAKELLGKMI-------KGERVEKLLVEEKICVAREYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR +  + ++ S+ GG++IEE+A+ +P+KI ++ +DP IG            +EL 
Sbjct: 102 SITVDRATKQITYLVSSMGGVEIEELARKHPEKIKRMSVDPSIGYLGYMGREAAVFMELP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +Y+   D D  L+E NPL +  + +L  LD+KI  DDN+L++H ++Q
Sbjct: 162 WSLSNQVDHVLSAMYRIMIDYDAELVEFNPLALTCDNKLIALDAKIIVDDNSLFKHPELQ 221

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            L  R ++     E +AK+   +Y+ LDG+IG + NGAGL MATMD I  YGG PANFLD
Sbjct: 222 ALYGRGLT---PYERKAKELGFNYVELDGDIGVISNGAGLTMATMDAILYYGGRPANFLD 278

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA +++V  A K++ +   VK +L+NIFGGI RCD +  G+L A+ E  ++ P+V+R
Sbjct: 279 IGGGAGRERVKEAVKLLLTHPKVKALLVNIFGGITRCDEVAHGVLEALAEAGVSKPVVVR 338

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           + G N + G R+++E G+ V +  ++D+A +KIV   +G
Sbjct: 339 MLGTNEEEGRRILSEKGITVYS--EMDEAVRKIVEYSRG 375


>gi|240172866|ref|ZP_04751525.1| succinyl-CoA synthetase subunit beta [Mycobacterium kansasii ATCC
           12478]
          Length = 387

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/398 (37%), Positives = 227/398 (57%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  S   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDSAEGAK-AIATEIGRPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++        + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYQHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGMDIEEVA   P ++ K+ +D + GV S    S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMDIEEVAATKPDRLAKVPVDAVTGVDSAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   +G++  LD+KI+ D NA +RH D  
Sbjct: 163 AEVLDAAAVTISKLWELFVAEDATLVEVNPLVRTPDGQILALDAKITLDANADFRHPDHG 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDEDVKSVFVNVFGGITSCDAVATGIVKALEILGGEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NVD G R++AE+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVDEGRRILAEANHPLVTLVPTMDEAADK 380


>gi|326771947|ref|ZP_08231232.1| succinyl-CoA synthetase, beta subunit [Actinomyces viscosus C505]
 gi|326638080|gb|EGE38981.1| succinyl-CoA synthetase, beta subunit [Actinomyces viscosus C505]
          Length = 401

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 233/405 (57%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARNLFRQHGVPVLDGAVATTPEEARSAAQSLLDAGSELVVVKAQVKTGGRGK- 59

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  + +   +  R+ILG  +        G  V  V + DG D+  E
Sbjct: 60  ---------AGGVKLARTAEEAEARARDILGMDI-------KGHTVRAVLISDGVDLDAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR       + S +GGMDIE +A + P+ + ++ IDPL G+T      + +  
Sbjct: 104 YYFSILLDRAERQYLAMCSREGGMDIETLAVERPEALARIGIDPLEGITPAVSHRIVEAA 163

Query: 178 ELQGQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             +     D    +   L++ F  +D +L+E+NPL+   +GR+  LD K++ DDN+ +RH
Sbjct: 164 GFEAGPLADEVAAVIERLWEVFTAEDATLVEVNPLVKAADGRIIALDGKVTLDDNSRFRH 223

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGG- 291
               EL D +  D  E  A++  L+Y+ L+G +G + NGAGL M+T+D++    + +GG 
Sbjct: 224 PAHAELVDNAATDPLEARAREAGLNYVRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGM 283

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  CD + +GI++AV+ +  
Sbjct: 284 KPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITSCDTVAQGIVTAVESLGG 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +  P+V+RL+G N D G  ++A++ +  +T +D  D A  +V A+
Sbjct: 344 LPKPVVVRLDGNNADTGRAILADAAIEGVTVVDTMDGAADVVTAI 388


>gi|269955535|ref|YP_003325324.1| succinyl-CoA synthetase subunit beta [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304216|gb|ACZ29766.1| succinyl-CoA synthetase, beta subunit [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 400

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/406 (35%), Positives = 233/406 (57%), Gaps = 29/406 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  GVV ++   A +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEKHGVPVLGGVVATTPEEARAAAEKLGGGTVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG  +        G  V+ V V  GA I  E Y 
Sbjct: 58  -------GGVKLAHSPAEAAEKAGEILGMDI-------KGHAVHRVMVAQGARIAEEFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + ++ +DP++G+ +   A + +  +  
Sbjct: 104 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALARVAVDPIVGIDAAKAAEIVETAKFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRHLDI 239
              + D   +   L+  F  +D +L+E+NPL+  ++G +  LD K++ DDNA   RH D 
Sbjct: 164 AALQADVAAVIQQLWTVFTAEDATLVEVNPLVRTEDGAIVALDGKVTLDDNASEVRHPDH 223

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
           + L D +  D  E +AK H L+Y+ LDG +G + NGAGL M+T+D++      +GG  PA
Sbjct: 224 EALEDKASSDPLEAKAKAHGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEEHGGVKPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA+   +AA   +I +D  VK + +N+FGGI  CD + KGI+ A++ +  + +
Sbjct: 284 NFLDIGGGANAQVMAAGLDVILNDPQVKSVFVNVFGGITACDEVAKGIVGALEILGDEAS 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLD---DAAQKIVHA 394
            PLV+RL+G NV++G  ++ E+   ++T A  +D   D A ++ HA
Sbjct: 344 KPLVVRLDGNNVELGRTILREANHPLVTLAETMDGGADKAAELAHA 389


>gi|269796097|ref|YP_003315552.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Sanguibacter
           keddieii DSM 10542]
 gi|269098282|gb|ACZ22718.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sanguibacter
           keddieii DSM 10542]
          Length = 390

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 229/405 (56%), Gaps = 28/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  GVV ++   A S  + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGVVATTPEEARSGAEELGGGTVVVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +     +   EILG  +        G  V+ V +  GA I  E Y 
Sbjct: 58  -------GGVKLAHTPDEAAARAEEILGMDI-------KGHTVHRVMIAAGAKIAEEFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     +AS +GGM+IE++A + P+ + K+ +DP++G+       + +     
Sbjct: 104 SVLLDRANRSYLAMASVEGGMEIEQLAVERPEALAKVAVDPIVGIDEAKAVEIAEAAGFA 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    D F  L+  + ++D +L+E+NPL+  ++G +  LD K++ D+NA +RH +  
Sbjct: 164 DDIKAQVVDAFQKLWTVYKEEDATLVEVNPLVRTEDGSIVALDGKVTLDENAGFRHAEHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
           +L D +  D  E +AK+++L+Y+ LDG +G + NGAGL M+T+D++   G A     PAN
Sbjct: 224 DLEDKAAADPLEAKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+K +      
Sbjct: 284 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALKVLGDAATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAID-LD---DAAQKIVHA 394
           PLV+RL+G NV+ G  ++ E+   ++T  D +D   D A ++ HA
Sbjct: 344 PLVVRLDGNNVEEGRAILIEAAHPLVTLADTMDGGADKAAELAHA 388


>gi|156087126|ref|XP_001610970.1| succinly CoA-ligase beta subunit [Babesia bovis T2Bo]
 gi|154798223|gb|EDO07402.1| succinly CoA-ligase beta subunit, putative [Babesia bovis]
          Length = 436

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 225/396 (56%), Gaps = 8/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA----IKTLPGPLYVVKSQIHAGGRGK 56
           +N+ E+    +L+++ +P     +  S   AE+     +++      V+K+ +  GGRGK
Sbjct: 39  LNVPEFGGMRILKEHGIPTPMNRLARSPSEAEAMTHEILESTKCGEVVLKALVLTGGRGK 98

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G+F         GV +  S +   +    ++G+ L+TKQTG +G +   V V +  ++ +
Sbjct: 99  GKF---VGTDISGVELAKSPERAKTLAEGMIGNVLVTKQTGASGLKCKEVLVAEKLNLAK 155

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+S ++DR+S  +  IA+  GG ++EEV++  P  +  + I+PL G+T ++V  +   
Sbjct: 156 ERYISFMLDRSSCSIMAIATKHGGGNVEEVSEKDPSAVLTVKINPLKGITDDEVTKIATH 215

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L+       D      N+Y AF  KD  LLEINPL   +N +L   DSK+  DDNA +R 
Sbjct: 216 LDFSKGLLEDTKSFVKNMYHAFVAKDALLLEINPLSETENSKLVACDSKVIIDDNADFRQ 275

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E    +E +  E  A +  L+YI+L GNI C+VNGAGLAMAT+D++  +GG+P+NF
Sbjct: 276 KEIFESVPPAENE-LEARANEVGLNYISLGGNIACIVNGAGLAMATLDLLTHHGGSPSNF 334

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    +  A  I+ SD+  K +L+NI GGI++CD      + A K  K+ IP+V
Sbjct: 335 LDVGGNATGHMLNQALDIVASDAKAKALLVNIVGGIVQCDQFALSFVEAAKNSKMQIPVV 394

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RL+G N D   R++ E+ +  I   D D AA+ +V
Sbjct: 395 LRLQGTNADAAKRILNEAQIPHIFCQDFDSAAKSVV 430


>gi|332669627|ref|YP_004452635.1| succinyl-CoA synthetase subunit beta [Cellulomonas fimi ATCC 484]
 gi|332338665|gb|AEE45248.1| succinyl-CoA synthetase, beta subunit [Cellulomonas fimi ATCC 484]
          Length = 393

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 232/400 (58%), Gaps = 35/400 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV-HAAESAIKTLP--GPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G+V ++   A E+A + LP  G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGIVATTPDEAREAATRLLPAEGGVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S         EILG  +        G  V+ V +  GA I +E
Sbjct: 61  ----------GGVKLARSADEAAEKAGEILGMDI-------KGHTVHRVMIAAGAKIAQE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASL 173
            Y SLL+DR       +AS +GGM+IE++A + P+ + ++ +DP  G+      E VA+ 
Sbjct: 104 FYFSLLLDRAERRYLAMASVEGGMEIEQLAVERPEALARVAVDPRTGIDQAKADEIVAAA 163

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               E+ G+      D+   L+  + D+D +L+E+NPL++ ++G +  LD K++ D NA 
Sbjct: 164 GFAPEIAGEV----ADVLQKLWLVYRDEDATLVEVNPLVLTEDGEVVALDGKVTLDANAD 219

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA- 292
           +RH D + L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G A 
Sbjct: 220 FRHADHEALEDKAAADPLEARAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAH 279

Query: 293 ----PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +AA   II +D  VK + +N+FGGI  CD +  GI++A++ 
Sbjct: 280 GGVKPANFLDIGGGASAEVMAAGLDIILTDPQVKSVFVNVFGGITACDAVANGIVAALEI 339

Query: 349 V--KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  + + PLV+RL+G NV  G R++A++G  ++T  D  D
Sbjct: 340 LGDEASKPLVVRLDGNNVLEGRRILADAGHPLVTLADTMD 379


>gi|221045470|dbj|BAH14412.1| unnamed protein product [Homo sapiens]
          Length = 291

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 128/260 (49%), Positives = 176/260 (67%)

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +           +   
Sbjct: 10  LIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMV 69

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSRE 252
            LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED R+
Sbjct: 70  KLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERD 129

Query: 253 IEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAF 312
            +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  AF
Sbjct: 130 KDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAF 189

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIA 372
           K+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA
Sbjct: 190 KLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIA 249

Query: 373 ESGLNVITAIDLDDAAQKIV 392
           +SGL ++   DLD+AA+ +V
Sbjct: 250 DSGLKILACDDLDEAARMVV 269


>gi|300932903|ref|ZP_07148159.1| succinyl-CoA synthetase subunit beta [Corynebacterium resistens DSM
           45100]
          Length = 401

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/407 (36%), Positives = 230/407 (56%), Gaps = 40/407 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ +   + VPV +  V ++   A+ A   L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDIFEAHGVPVLRAKVATTPEQAKEAATELGTPVVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       +ILG  +        G  V  V + +GADI  E Y 
Sbjct: 58  -------GGVKLAKSPEEAAQHAEQILGMDI-------KGHTVRKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT      + S +GG++IE++A + P+ + +     L G+T E    + +   + 
Sbjct: 104 SILLDRTRRRYLAMFSKEGGVEIEKLAVEKPEALVRRNFTALEGLTEEIAREIAEQGGMT 163

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G+   D   + P    LYK + ++D SL+E+NPL+   +GR+  LD K+S DDNA +RH 
Sbjct: 164 GE---DIDKIVPVMQTLYKVYSEEDASLVEVNPLVKTGDGRIIALDGKVSLDDNAEFRHP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           +  +L D S  D  E++AK+ +L+Y+ LDGN+G + NGAGL M+T+D++   G       
Sbjct: 221 EHAKLADPSSSDPLELKAKELDLNYVKLDGNVGVIGNGAGLVMSTLDVVAYAGEEFDSKP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK---- 347
           APANFLD+GGGA  + +A    +I  D  VK + +N+FGGI  CD +  GI++A K    
Sbjct: 281 APANFLDIGGGASAEVMANGLGVILGDEQVKSVFVNVFGGITACDEVANGIVNAFKILAD 340

Query: 348 ---EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
              E K   PLV+RL+G N D+G R++ E+ L  +  +  +DDAA++
Sbjct: 341 QGVEPK---PLVVRLDGNNADLGRRILEEANLPRVEMVGSMDDAARR 384


>gi|322788071|gb|EFZ13896.1| hypothetical protein SINV_14509 [Solenopsis invicta]
          Length = 288

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 130/286 (45%), Positives = 186/286 (65%), Gaps = 1/286 (0%)

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
           +S  +V + ++ +LG  LITKQT   G  V  + + +  DI RE Y+ +L+DR       
Sbjct: 3   NSRNAVANYVKNMLGHRLITKQTSKDGILVQKIMIAESVDIARETYVCILMDRQHNGPVL 62

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL-FP 192
           IAS  GGMDIE VA+ +P++I  + +D   G+  E    +C  L       ++       
Sbjct: 63  IASPAGGMDIETVAEKHPEQIKTVSLDIYHGIDDEIAKDVCIFLGFSKPDILNKAIYELK 122

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSRE 252
           NL+K F D D   +EINPL+   + ++  +D+KI+FDDNA +R  D+  L DVSE+D RE
Sbjct: 123 NLWKLFVDIDALQVEINPLVETTDKQVVAVDAKITFDDNAQFRQQDLFALEDVSEKDPRE 182

Query: 253 IEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAF 312
           ++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLDVGG   +D+V  AF
Sbjct: 183 VDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVGGNVKEDQVFQAF 242

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +I++ D  VK IL+N+FGGI+ C  + KGI++A + + + IPLV+R
Sbjct: 243 RILSEDPKVKVILVNVFGGIVNCVTIAKGIIAASQNLGLKIPLVVR 288


>gi|119964224|ref|YP_946832.1| succinyl-CoA synthetase subunit beta [Arthrobacter aurescens TC1]
 gi|189046878|sp|A1R3M0|SUCC_ARTAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119951083|gb|ABM09994.1| succinyl-CoA synthetase, beta subunit [Arthrobacter aurescens TC1]
          Length = 389

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/402 (36%), Positives = 227/402 (56%), Gaps = 34/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + +  +     ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTAEEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S+L+DR +     + S +GGM+IE++A + P+ + K+ IDP +G+      E VA+    
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFA 162

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL+G+      D+   L+  F  +D +L+E+NPL+    G +  LD K+S D+NA +RH
Sbjct: 163 EELRGKV----ADVILKLWDVFKKEDATLVEVNPLVRTGAGEIVALDGKVSLDENADFRH 218

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG----- 291
           +    L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G      
Sbjct: 219 VHHAHLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNV 278

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLD+GGGA  + +A    +I  DS VK + +N+FGGI  CD + KGI+ A+ E+  
Sbjct: 279 KPANFLDIGGGASAEVMANGLDVILGDSQVKSVFVNVFGGITACDAVAKGIVGALAELGS 338

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
             N PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K
Sbjct: 339 SANKPLVVRLDGNNVEEGRRILTEANHPLVTLAATMDEGADK 380


>gi|297559044|ref|YP_003678018.1| succinyl-CoA synthetase subunit beta [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843492|gb|ADH65512.1| succinyl-CoA synthetase, beta subunit [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 393

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 145/399 (36%), Positives = 217/399 (54%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG---PLYVVKSQIHAGGRGKG 57
           M++ EYQAK L  +Y VPV +G V S+   A +          P  VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQAKQLFAEYGVPVPQGKVASTAAEARAIADEFAAAGKPRVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V    +   +   +ILG  +        G  V+ V VE+ +DI  E
Sbjct: 61  ----------GGVKVAEGPEDAQAKAEQILGMDI-------KGHTVHRVLVEEASDIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S L+DR +     I S +GGMDIEEVA+  P  + K  +D L G  +   A +    
Sbjct: 104 YYFSFLLDRANRTFLSICSAEGGMDIEEVAETNPDAVAKFPVDALTGAPASIAAEIVKAG 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L   A     ++   L+ AF  KD +L+E+NPLI+ K+GR+  LD K++ D+NA +R  
Sbjct: 164 KLPEAATEGATEVITKLWDAFVGKDATLVEVNPLILTKDGRVVALDGKVTLDENAEFRQ- 222

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----- 292
           D++ L    E D  E+ AK   L+Y+ LDG +G + NGAGL M+T+D++   G A     
Sbjct: 223 DLESLTFAEEGDPLEVAAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVK 282

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-- 350
           PANFLD+GGGA  + +A    II  D SVK + +N+FGGI  CD +  GI+ A++ ++  
Sbjct: 283 PANFLDIGGGASAEVMANGLDIILGDPSVKSVFVNVFGGITACDAVANGIVQALELLESR 342

Query: 351 ---INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              ++ PLV+RL+G N ++G  ++ +     +  +D  D
Sbjct: 343 GDDVSKPLVVRLDGNNAELGREILTKRAHPAVRQVDTMD 381


>gi|297566584|ref|YP_003685556.1| succinyl-CoA synthetase subunit beta [Meiothermus silvanus DSM
           9946]
 gi|296851033|gb|ADH64048.1| succinyl-CoA synthetase, beta subunit [Meiothermus silvanus DSM
           9946]
          Length = 387

 Score =  249 bits (635), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/361 (40%), Positives = 196/361 (54%), Gaps = 19/361 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +Y +PV  G V  +   A+  I T  G   V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKELLARYGIPVPPGKVAYTADEAKQ-IATEYGNTVVIKAQVHTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G     V V    DI +E Y 
Sbjct: 57  -------GGVKLAKTPEEAREKASQILGLNI-------KGFVTRKVLVAKAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  + S +GG+DIEEVA   P  I K  IDP  G+   +   L     ++
Sbjct: 103 GLILDRVTQRVVLMLSKEGGVDIEEVAATKPYAIIKHPIDPHKGLRPFEARELIKKAGME 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY A+   D S+ EINPL+I   G +   D+KI  DDNALYRH D+ 
Sbjct: 163 GNLN-KLASVLVQLYNAYVGIDASIAEINPLVITPAGDVVAADAKIVLDDNALYRHPDLS 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LR+V  E   E+EA  +  SY+ LDG IG + NGAGL M T+D++   GG  ANFLD+G
Sbjct: 222 TLREVDAEHPLEVEASNYGFSYVKLDGWIGVIGNGAGLVMYTLDLVNRVGGKAANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A+ E  +  P+ MR+ 
Sbjct: 282 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRAMDEGILTKPVAMRVA 341

Query: 361 G 361
           G
Sbjct: 342 G 342


>gi|299133558|ref|ZP_07026752.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
 gi|298591394|gb|EFI51595.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
          Length = 390

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 224/399 (56%), Gaps = 23/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  Y +P   G V  +   A +    L G    VK+Q+HAGGR +    
Sbjct: 1   MNLHEFQAKQILAGYGLPSPGGKVAITPDQAVAIYNELGGGAVAVKAQVHAGGRAQA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S K   S    +LG  L+T QTGP G  V  +Y+E   + +REL++
Sbjct: 58  -------GGVKIVHSEKEAKSVAASLLGKKLVTAQTGPAGRVVRRIYIEKAVEPVRELHV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+D +SG +    S  GG DIEE A     ++ +L +       +++VA+    + + 
Sbjct: 111 ALLIDGSSGHLTLFGSAHGGGDIEERAARGELRLERLGLGDGSKRLADEVAAFASKIRID 170

Query: 181 G------QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           G      +A +DG      L +AF + D SL+EINPL ++++G  + LD K+  +DNAL+
Sbjct: 171 GASVPAFEAIVDG------LRRAFVELDASLIEINPLAMLRDGSFQALDVKMVLEDNALF 224

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           RH D+  LRD  + D RE+EA++H L+++++DGNIG + NGAGL +A++D++    G PA
Sbjct: 225 RHPDLTALRDEDDIDQREVEAQRHQLNFVSMDGNIGIVANGAGLGLASVDLVYAAKGKPA 284

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR-CDVLVKGILSAVKEVKINI 353
           NF+D+   A    VA  F ++  + + + I +N+ GG M+ CD + +G+  A++    ++
Sbjct: 285 NFMDIRTTATSLDVAYGFGLLLDNPATRAIFLNVHGGGMQPCDTIAEGLGIAMRRTGRSL 344

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           P+V RL G N +         G  VI   D+  AA K+V
Sbjct: 345 PVVARLAGNNAEFARSRFVNFGCPVIDCPDMWTAATKVV 383


>gi|13235368|emb|CAC33661.1| Succinyl-CoA synthetase beta subunit [Rickettsia rickettsii]
          Length = 248

 Score =  248 bits (634), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 128/246 (52%), Positives = 172/246 (69%)

Query: 151 PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           P+KI K  +DP  G+    +  +   L  +        ++  ++Y AF + D + +EINP
Sbjct: 3   PEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINP 62

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           LI+  +G L  LD+KI+FDDN L RH +I  +RD  EED  E  A    LSY+ +DGNIG
Sbjct: 63  LIVNSDGNLLALDAKITFDDNGLLRHPNITAMRDHDEEDPLETRAANAGLSYVKMDGNIG 122

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
           CMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V  A KII SD +V+GIL+NIFG
Sbjct: 123 CMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERVKEALKIILSDKAVQGILVNIFG 182

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           GIMRCD++ +GI++A K++ I +PLV+RL G NV+ G  +++ SGL +I A DL DAA K
Sbjct: 183 GIMRCDIIAEGIIAAAKDIGIKVPLVVRLAGTNVEKGKEILSNSGLEIIPAHDLADAANK 242

Query: 391 IVHAVK 396
           IV A++
Sbjct: 243 IVEAIR 248


>gi|220911707|ref|YP_002487016.1| succinyl-CoA synthetase subunit beta [Arthrobacter chlorophenolicus
           A6]
 gi|254778427|sp|B8HDC2|SUCC_ARTCA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219858585|gb|ACL38927.1| succinyl-CoA synthetase, beta subunit [Arthrobacter
           chlorophenolicus A6]
          Length = 389

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/402 (36%), Positives = 226/402 (56%), Gaps = 34/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAYTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S    +     ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKSADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S+L+DR +     + S +GGM+IE++A + P+ + K+ IDP +G+      E VA+    
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFA 162

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL+G+      D+   L+  F  +D +L+E+NPL+    G +  LD K+S D+NA +RH
Sbjct: 163 EELRGKV----ADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVSLDENAEFRH 218

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG----- 291
               +L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G      
Sbjct: 219 AKHAQLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNV 278

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD + KGI+ A+ E+  
Sbjct: 279 KPANFLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVAKGIVGALAELGH 338

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
             N PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K
Sbjct: 339 TANKPLVVRLDGNNVEEGRRILNEANHPLVTLAATMDEGADK 380


>gi|227875825|ref|ZP_03993951.1| succinyl-CoA synthetase beta chain [Mobiluncus mulieris ATCC 35243]
 gi|227843573|gb|EEJ53756.1| succinyl-CoA synthetase beta chain [Mobiluncus mulieris ATCC 35243]
          Length = 386

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 229/398 (57%), Gaps = 36/398 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGEAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ I P  G+  E +A+     E+ 
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIERLAKEKPEALAKVPI-PRTGM-DETLAT-----EIT 156

Query: 181 GQARID---GGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            QA  D   G  + P    L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA Y
Sbjct: 157 QQAGFDPETGSKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARY 216

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYG 290
           RH +  EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++    + YG
Sbjct: 217 RHPEHSELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYG 276

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
             PANFLD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ + 
Sbjct: 277 TRPANFLDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILG 336

Query: 350 -KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              N PLV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 337 DSANKPLVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|13235376|emb|CAC33598.1| Succinyl-CoA synthetase beta subunit [Rickettsia montanensis]
          Length = 249

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/246 (51%), Positives = 172/246 (69%)

Query: 151 PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           P+KI K  +DP  G+    +  +   L  +        ++  ++Y AF + D + +EINP
Sbjct: 3   PEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEINP 62

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           LI+  +G L  LD+KI+FDDN L++H +I  +RD  EED  E  A    LSY+ +DGNIG
Sbjct: 63  LIVNSDGNLLALDAKITFDDNGLFQHPNITAMRDHDEEDPLETRAANAGLSYVKMDGNIG 122

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
           CMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V  A KII SD  V+GIL+NIFG
Sbjct: 123 CMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERVKEALKIILSDKEVQGILVNIFG 182

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           GIMRCD++ +GI++A K++ I +PLV+RL G NV+ G  +++ SGL +I A DL DAA K
Sbjct: 183 GIMRCDIIAEGIIAAAKDIGIKVPLVVRLAGTNVEKGEEILSNSGLEIIPAHDLADAANK 242

Query: 391 IVHAVK 396
           IV A++
Sbjct: 243 IVAAIR 248


>gi|317145591|ref|XP_001820913.2| succinyl-CoA synthetase beta subunit [Aspergillus oryzae RIB40]
          Length = 372

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 213/363 (58%), Gaps = 18/363 (4%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           + +PV +G V+ S  AA   +  +   G   V+K+QI AGGRGKG++    +D KGGVR+
Sbjct: 9   FQIPVPEGFVVKSPEAARDVVYNIATSGAPSVMKAQILAGGRGKGKYN---SDGKGGVRI 65

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
             S      +   ++G +L+TKQT P G  VN +Y+    DI +E Y+++  DR      
Sbjct: 66  VDSPDEAFENASNMIGYSLVTKQTPPDGLPVNKLYIYKSVDIAQEFYVAITFDRARYKPV 125

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ-GQARIDGG--- 188
            + S  GG++IE       +  F L      G+T E  A     +E Q G +  D G   
Sbjct: 126 LLMSDDGGVNIESNVNQLQRFWFNLST----GITPEIAA----YIEAQFGFSDDDMGMVT 177

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
            +   L K F +KD +LLE+NP +    G L  +D+K +FDD+A +R  ++  L + S E
Sbjct: 178 HILRQLVKLFREKDATLLELNPFVRTTEGSLICIDAKFNFDDSAKFRQPELVSLVEHSAE 237

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           +  E EA Q  LSYI LDGNIG +VNGAGLAMAT D++ LYGG  ANFLD+GGGA ++ +
Sbjct: 238 EKDEYEASQLGLSYIRLDGNIGVIVNGAGLAMATNDLVTLYGGNCANFLDIGGGATKETL 297

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIG 367
           + AF I+  DS  K + INI+GGI+RCD++ + IL+A   +   +IP+V+RL+G N + G
Sbjct: 298 SKAFSILQGDSRTKALFINIYGGIVRCDMIAESILAASAAMGGFSIPVVVRLQGTNYEKG 357

Query: 368 NRL 370
            +L
Sbjct: 358 FKL 360


>gi|257068098|ref|YP_003154353.1| succinyl-CoA synthetase subunit beta [Brachybacterium faecium DSM
           4810]
 gi|256558916|gb|ACU84763.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Brachybacterium
           faecium DSM 4810]
          Length = 389

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/392 (35%), Positives = 220/392 (56%), Gaps = 23/392 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  GVV     AA++  + L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLGGVVAEDPAAAKAGAEKLGTPVVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       EILG  +        G  V+ V +  GADI  E Y 
Sbjct: 58  -------GGVKIAKSPEEAEQKASEILGMDI-------KGHTVHRVMIAAGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +     + S +GGM+IE++A + P+ + ++ +DP +G+       +    +  
Sbjct: 104 SLLLDRANRNYLAMCSVEGGMEIEQLAVERPEALARVAVDPNVGIDQAKAEEIVAAAKFD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L+ A+ ++D +L+E+NPL+   +G +  LD KI+ DDNA +R     
Sbjct: 164 AETGAKVAPVLVKLWDAYREEDATLVEVNPLVKTGDGEIVALDGKITLDDNAQFRQEGHS 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGAPANF 296
           EL DV+ ED  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++    + +G  PANF
Sbjct: 224 ELVDVASEDPLETKAKSLDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGVKPANF 283

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I  D  V  + +N+FGGI  CD +  GI+ A+K++      P
Sbjct: 284 LDIGGGASAEVMANGLDVILGDEQVSAVFVNVFGGITACDAVANGIVGALKKLGDAATKP 343

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G NV+ G  ++A+    ++T  D  D
Sbjct: 344 LVVRLDGNNVEEGRSILADFAHPLVTQADTMD 375


>gi|159041785|ref|YP_001541037.1| succinyl-CoA synthetase, beta subunit [Caldivirga maquilingensis
           IC-167]
 gi|157920620|gb|ABW02047.1| succinyl-CoA synthetase, beta subunit [Caldivirga maquilingensis
           IC-167]
          Length = 377

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/381 (38%), Positives = 215/381 (56%), Gaps = 27/381 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK-GRF 59
           M + EY+ K +L KY V V KGVVISSV   + +   L  P++V KSQ+   GR K G  
Sbjct: 1   MRLLEYKGKEILAKYGVSVPKGVVISSVSDIDKS--NLKYPVFV-KSQVPFAGRAKMGLV 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           K      +        L  VI D                    V  V +E+G D+++E Y
Sbjct: 58  KRANNKDEAKQIASEYLGKVIQDFE------------------VKKVLLEEGVDVVKEYY 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S+ +DR+S     +AS +GG+DIEE+A+  P+KI++  I P  G+    V ++   +  
Sbjct: 100 VSVTIDRSSRTFIILASPEGGVDIEEIARTSPEKIYRGRIHPFEGLRDYTVNAINKFMGF 159

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       L   +Y  F   D  L+EINPL + ++G    LD KI  DDNALYRH DI
Sbjct: 160 TGELASKFASLLRIMYNVFETYDAELVEINPLALTRDGNFVALDVKIMIDDNALYRHGDI 219

Query: 240 --QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
             +E  D++ E   E+EA+++   Y+ L G +G + NGAGL MATMD++K + G PA+FL
Sbjct: 220 SVEEEGDLTRE---ELEARKYGFHYVELPGYVGVVGNGAGLTMATMDLVKEFKGEPADFL 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA +D V AA  ++  D  +KGI++NIFGGI R D +  G++ A KE+  + PL +
Sbjct: 277 DVGGGASRDIVKAALSLLLKDERIKGIVLNIFGGITRGDEVAYGVVEAFKEIGASKPLAI 336

Query: 358 RLEGANVDIGNRLIAESGLNV 378
           RL+G N + G R++A  G+ +
Sbjct: 337 RLKGTNEEEGRRILAPLGVKI 357


>gi|306819106|ref|ZP_07452820.1| succinyl-CoA ligase subunit beta [Mobiluncus mulieris ATCC 35239]
 gi|304648082|gb|EFM45393.1| succinyl-CoA ligase subunit beta [Mobiluncus mulieris ATCC 35239]
          Length = 386

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 229/398 (57%), Gaps = 36/398 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGEAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ I P  G+  E +A+     E+ 
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIERLAKEKPEALAKVPI-PRTGM-DETLAT-----EIT 156

Query: 181 GQARID---GGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            QA  D   G  + P    L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA Y
Sbjct: 157 QQAGFDPETGSKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARY 216

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYG 290
           RH +  EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++    + YG
Sbjct: 217 RHPEHSELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYG 276

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
             PANFLD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ + 
Sbjct: 277 TRPANFLDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILG 336

Query: 351 INI--PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            N   PLV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 337 DNASKPLVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|149412748|ref|XP_001510520.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 371

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/354 (39%), Positives = 206/354 (58%), Gaps = 7/354 (1%)

Query: 44  VVKSQIHAGGRGKGRFKELPADS--KGGVRVESSLKSVISDIREILGSTLITKQTGPTGS 101
           V+K+QI AGGRGKG F     DS  +GGV +    K V    ++++G  L TKQT   G 
Sbjct: 20  VLKAQILAGGRGKGTF-----DSGLQGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKDGV 74

Query: 102 RVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
           +VN V + +  DI RE Y ++L+DR       + S +GG+DIE+VA   P+ IFK  +D 
Sbjct: 75  KVNKVMIAEALDISRETYFAILMDRACNGPVLVGSPKGGVDIEDVAATTPELIFKEEVDI 134

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
             G+       + + L  +   +    D    LY  F + D + +E+NP      G++  
Sbjct: 135 YEGLKDSQALRMAENLGFKDALKNQAADQIKKLYTLFLEIDATQVEVNPFGETPEGQVVC 194

Query: 222 LDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
            D+KI+FDDNA +R  +I  + D SE +  E EA +++L YI LDGNI C VNGAGLAMA
Sbjct: 195 FDAKINFDDNAEFRQKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMA 254

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           T DII L GG PANFLD+GGG  + +V  AFK++T+D  V  +++ + G I  C VL + 
Sbjct: 255 TCDIISLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVTHLIVQLIGVIYNCIVLSQA 314

Query: 342 ILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +      +   + + + + G NV   +R++ +SGL + +A DL+DAA+K+V +V
Sbjct: 315 VTKGCLTLSKKLVIFISISGTNVHEAHRILNDSGLPITSANDLEDAAKKVVASV 368


>gi|134085328|ref|NP_001076816.1| succinate-CoA ligase, GDP-forming, beta subunit [Xenopus (Silurana)
           tropicalis]
 gi|134023817|gb|AAI35373.1| LOC496495 protein [Xenopus (Silurana) tropicalis]
          Length = 269

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/266 (46%), Positives = 170/266 (63%)

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           M  F  S QGGMDIEEVA+  P+ IFK  ID   G+       + D L  +G  +    +
Sbjct: 1   MGLFFGSPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQALRMADNLGFKGPLQQQAAE 60

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
               LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I  + D SE D
Sbjct: 61  QIKRLYHLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDDTSETD 120

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
             E EA  ++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+GGG  + +V 
Sbjct: 121 PIENEANSYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKESQVY 180

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    R
Sbjct: 181 QAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAKR 240

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAV 395
           ++AESGL + +A DLDDAA+K V ++
Sbjct: 241 ILAESGLPITSANDLDDAARKAVASI 266


>gi|297526343|ref|YP_003668367.1| succinyl-CoA synthetase, beta subunit [Staphylothermus hellenicus
           DSM 12710]
 gi|297255259|gb|ADI31468.1| succinyl-CoA synthetase, beta subunit [Staphylothermus hellenicus
           DSM 12710]
          Length = 379

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/398 (35%), Positives = 221/398 (55%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++AK + R   VPV +G +  +   A +  + + G + V+K+Q+  G RG     
Sbjct: 1   MKLYEFEAKEIARNNGVPVPRGNIAKTPEEARTVAEKIGGEV-VLKAQVLVGRRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV   S+        RE+    +        G +   + VE+   I +E YL
Sbjct: 57  -------GGVLFASNPLEAEKVARELFNKRI-------RGEKAQLILVEEKICIDKEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL +DR++  + ++ S  GG++IEE+ K YP K+ ++ +DP+IG  S         L L 
Sbjct: 103 SLTIDRSNREIVYLVSPLGGVEIEELVKKYPNKLLRIRVDPMIGYKSYMSRLAAKFLGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  ++Y    + D  L+E NPL+   +  +  +D+KI+ DDN+LYRH +  
Sbjct: 163 KELWPSIHKIMNSMYNIMKNYDADLVEFNPLVKTCSNEIVAVDAKITIDDNSLYRHPEFA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E +   E    E  AK+   SY+ LDG++G M NGAGL MATMD++  YGG PANFLD+G
Sbjct: 223 E-KYGRELSKLEAIAKKLGFSYVELDGDVGIMCNGAGLTMATMDMVAYYGGRPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  A K++     VK +LINIFGGI RCD + +GI+ AV+E  +  P+V+RL 
Sbjct: 282 GGASRERVKEAAKLLLKHDKVKVLLINIFGGITRCDEVARGIIEAVEETGVKKPIVIRLL 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N +IG RL+ E G +V +  + DDA +K V   K +
Sbjct: 342 GTNEEIGRRLLEEKGYSVFS--EADDAVKKAVEIAKNL 377


>gi|256086475|ref|XP_002579424.1| succinyl-CoA synthetase beta chain [Schistosoma mansoni]
 gi|238664858|emb|CAZ35663.1| succinyl-CoA synthetase beta chain, putative [Schistosoma mansoni]
          Length = 347

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/409 (36%), Positives = 215/409 (52%), Gaps = 95/409 (23%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIK---------------TLPGPLYVVKSQIHAGGRG 55
           LL+KY +PV K +V  +V    +A K               T      V+K+Q+ AGGRG
Sbjct: 3   LLKKYEIPVPKFIVARNVDEVRAACKEFGILPEKELENSGETRESTDIVLKAQVLAGGRG 62

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           KG +    +  KGGV++  S++  ++   ++LG  + T QTG TG   N +   +     
Sbjct: 63  KGTWD---SGLKGGVKIVYSMEEAVNVASQMLGHRIYTAQTGDTGQLCNTLLACERKYSR 119

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           RE YL++++DR+ G    I   QG                        GV  ED+A +C 
Sbjct: 120 REHYLAIVLDRSCGGPVMIGCQQG------------------------GVNIEDIALVC- 154

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
                                                         +D K++FDDNA +R
Sbjct: 155 ----------------------------------------------MDCKLNFDDNASFR 168

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             +I   RD S+ED R+++A +  L+YI LDGNIGC+VNGAGLAMATMD+I+L+GG+PAN
Sbjct: 169 QKEIFAQRDWSQEDERDVKASKAGLNYIGLDGNIGCLVNGAGLAMATMDLIQLHGGSPAN 228

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA  D+V  AF++ITSD  V  IL+NIFGGIMRCDV+ +GI++A  E+ I +P+
Sbjct: 229 FLDVGGGATADQVTEAFRLITSDPKVNAILVNIFGGIMRCDVIAQGIVAAATELNIKVPI 288

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ------KIVHAVKGV 398
           V+RL+G  V+    ++A S + ++   DLD+AAQ       IVH  + V
Sbjct: 289 VVRLQGTRVEDAKAILATSHMKILGCSDLDEAAQMSVKLANIVHLAREV 337


>gi|323357166|ref|YP_004223562.1| succinyl-CoA synthetase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323273537|dbj|BAJ73682.1| succinyl-CoA synthetase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 387

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/398 (36%), Positives = 228/398 (57%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  KY VPV  G++  +   A++A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKYEVPVLAGIIADTPEEAKAAAEKLGG-VVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +        + ILG  +        G  V  V V  GA I +E Y 
Sbjct: 57  -------GGVKVAKNPDEAFEAAQAILGLDI-------KGHVVKRVMVAAGARIAKEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     ++S +GGM+IEE+A + P  + ++ +DP+ G+T E    +    +  
Sbjct: 103 SVLLDRSNRSYLSLSSVEGGMEIEELAVERPDALARIEVDPIEGITPEKALEIARAAKFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+F  LY  +  +D +L+E+NPLI  ++G +  LD K+S D+NA +RH D +
Sbjct: 163 EELAPKVADVFVKLYNVYKGEDATLVEVNPLIQSEDGDIIALDGKVSLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
            L D    D  E +AKQH+L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 ALEDKDAADPLEAKAKQHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I  D  VK + +N+FGGI  C  + +GI+ A++ +      
Sbjct: 283 FLDIGGGASATVMAAGLDVILGDEQVKSVFVNVFGGITSCVAVAEGIVKALEILGDTATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           PLV+RL+G  V+ G  ++A +   ++T A  +D+ A K
Sbjct: 343 PLVVRLDGNQVEEGREILAGANHPLVTLAAGMDEGADK 380


>gi|269977460|ref|ZP_06184432.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mobiluncus mulieris
           28-1]
 gi|269934376|gb|EEZ90938.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mobiluncus mulieris
           28-1]
          Length = 386

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 229/398 (57%), Gaps = 36/398 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGEAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ I P  G+  E +A+     E+ 
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIERLAKEKPEALAKVPI-PRTGM-DETLAT-----EIT 156

Query: 181 GQARID---GGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            QA  D   G  + P    L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA Y
Sbjct: 157 QQAGFDPETGLKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARY 216

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYG 290
           RH +  EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++    + YG
Sbjct: 217 RHPEHSELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYG 276

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
             PANFLD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ + 
Sbjct: 277 TRPANFLDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILG 336

Query: 351 INI--PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            N   PLV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 337 DNASKPLVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|62319649|dbj|BAD95156.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|222423482|dbj|BAH19711.1| AT2G20420 [Arabidopsis thaliana]
          Length = 210

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 117/202 (57%), Positives = 154/202 (76%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  ++  +RD ++ED RE+
Sbjct: 7   LYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPREV 66

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
            A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGG A + +V  AFK
Sbjct: 67  AAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFK 126

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           I+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+RLEG NV+ G R++ E
Sbjct: 127 ILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKE 186

Query: 374 SGLNVITAIDLDDAAQKIVHAV 395
           SG+ +ITA DLDDAA+K V A+
Sbjct: 187 SGMKLITADDLDDAAEKAVKAL 208


>gi|116669380|ref|YP_830313.1| succinyl-CoA synthetase subunit beta [Arthrobacter sp. FB24]
 gi|189046879|sp|A0JT43|SUCC_ARTS2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116609489|gb|ABK02213.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Arthrobacter
           sp. FB24]
          Length = 389

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/402 (36%), Positives = 225/402 (55%), Gaps = 34/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +    +     ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S+L+DR +     + S +GGM+IE++A + P  + K+ IDP +G+      E VA+    
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPDALAKVAIDPAVGIDQAKADEIVAAAGFA 162

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL+G+      D+   L+  F  +D +L+E+NPL+    G +  LD K++ D+NA +RH
Sbjct: 163 EELRGKV----ADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVTLDENADFRH 218

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG----- 291
                L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G      
Sbjct: 219 AKHALLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNV 278

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD + KGI+ A+ E+  
Sbjct: 279 KPANFLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVAKGIVGALAELGH 338

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
             N PLV+RL+G NV+ G R++AE+   ++T A  +D+ A K
Sbjct: 339 SANKPLVVRLDGNNVEEGRRILAEANHPLVTLAATMDEGADK 380


>gi|269128416|ref|YP_003301786.1| succinyl-CoA synthetase subunit beta [Thermomonospora curvata DSM
           43183]
 gi|268313374|gb|ACY99748.1| succinyl-CoA synthetase, beta subunit [Thermomonospora curvata DSM
           43183]
          Length = 396

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/399 (36%), Positives = 218/399 (54%), Gaps = 30/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ E+QAK L  +Y VPV  G V  +   A +  + L        V+K+Q+  GGRGK 
Sbjct: 1   MDLFEHQAKELFAEYGVPVPTGKVAHTPQEARAIAEELFAAGSQKVVIKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++        +   +ILG  +        G  V+ V VE G+ I +E
Sbjct: 61  ----------GGVKLADDADEAQALAEQILGMDI-------KGHTVHKVLVEAGSAIAQE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S L+DR +     I S +GGMDIEEVA   P+ + K+ I  L GV       +    
Sbjct: 104 FYFSFLLDRANRSFLSICSAEGGMDIEEVAATKPEAVAKVPISALTGVDRAKAREIAQAG 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L  QA     +L   L+  F D+D +L+E+NP+I+  +GR+  LD K++ DDNA +R  
Sbjct: 164 KLPEQALDGAAELIERLWAVFTDEDATLVEVNPMILTTDGRVMALDGKVTLDDNADFRQP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA- 292
           D   L D    D  E  AK+  L+Y+ LDG +G + NGAGL M+T+D++      +GG  
Sbjct: 224 DHAALADEKTTDPLEARAKEKGLNYVKLDGTVGVIGNGAGLVMSTLDVVAYAGEEFGGQK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--- 349
           PANFLD+GGGA  + +A   +I+ SD SVK + +N+FGGI  CD +  GI++A K +   
Sbjct: 284 PANFLDIGGGASAEVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVTAYKLLAER 343

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              ++ PLV+RL+G N ++G +++ ++GL  +  +D  D
Sbjct: 344 GESVDRPLVVRLDGNNAELGRKILDDAGLPGVERVDTMD 382


>gi|329938123|ref|ZP_08287574.1| succinyl-CoA synthetase subunit beta [Streptomyces
           griseoaurantiacus M045]
 gi|329302612|gb|EGG46502.1| succinyl-CoA synthetase subunit beta [Streptomyces
           griseoaurantiacus M045]
          Length = 393

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/411 (36%), Positives = 231/411 (56%), Gaps = 33/411 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAAREITERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ +S    ++   +ILG  +        G  VN V + E   +I+ E Y
Sbjct: 57  -------GGVKLAASADEAVARATDILGMDI-------KGHTVNKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GG++IEEVA   P+ + K  ID + GVT E    + +  + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGVEIEEVAATRPEAVAKTPIDAIDGVTPEKAREIVEAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH D 
Sbjct: 163 PAEVADQVANVLVKLWDTFIKEDALLVEVNPLAKVASGEVIALDGKVSLDDNAEFRHPDF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELHDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+K ++    
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK---IVHAVK 396
            ++ PLV+RL+G N ++G +++ ++G  ++  +D +D AA K   + HA K
Sbjct: 343 NVSKPLVVRLDGNNAELGRKILTDAGHPLVQRVDTMDGAADKAAELAHAAK 393


>gi|307700250|ref|ZP_07637290.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris FB024-16]
 gi|307614461|gb|EFN93690.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris FB024-16]
          Length = 386

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/398 (37%), Positives = 229/398 (57%), Gaps = 36/398 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGKAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG++IE +AK+ P+ + K+ I P  G+  E +A+     E+ 
Sbjct: 104 SILLDRANRQNLAMCSVEGGVEIERLAKEKPEALAKVPI-PRTGM-DETLAT-----EIT 156

Query: 181 GQARID---GGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            QA  D   G  + P    L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA Y
Sbjct: 157 QQAGFDPETGSKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARY 216

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYG 290
           RH +  EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++    + YG
Sbjct: 217 RHPEHSELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYG 276

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
             PANFLD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ + 
Sbjct: 277 TRPANFLDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILG 336

Query: 351 INI--PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            N   PLV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 337 DNASKPLVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|300742290|ref|ZP_07072311.1| succinyl-CoA synthetase, beta subunit [Rothia dentocariosa M567]
 gi|311112207|ref|YP_003983429.1| succinyl-CoA ligase subunit beta [Rothia dentocariosa ATCC 17931]
 gi|300381475|gb|EFJ78037.1| succinyl-CoA synthetase, beta subunit [Rothia dentocariosa M567]
 gi|310943701|gb|ADP39995.1| succinyl-CoA ligase subunit beta [Rothia dentocariosa ATCC 17931]
          Length = 388

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/398 (36%), Positives = 228/398 (57%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV KG+V ++   A++A + + G L V+K+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLKGIVATTPEEAKAAAEEIGG-LTVIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +        ++ILG  +        G  V+ V V  GADI  E Y 
Sbjct: 57  -------GGVKLAKNPDEAYEYAQQILGMDI-------KGHTVHRVLVAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + K+ +DPL+G+ S     + +     
Sbjct: 103 SILLDRANRSYLAMCSVEGGMEIEQLAAERPEALAKVEVDPLVGIDSAKAQEIVEAAGFS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +    ++   L   F  +D +L+E+NPL+    G +  LD K+S DDNA +R  D  
Sbjct: 163 AELQPKVVEVLVKLGDVFNKEDATLVEVNPLVQTPEGDILALDGKVSLDDNAEFRQPDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D S E+  E +AKQH+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDKSAENPLEAKAKQHDLNYVKLDGEVGVVGNGAGLVMSTLDVVAYAGEKHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA  +II  D  VK + +N+FGGI  CD + +GI+ A++ +      
Sbjct: 283 FLDIGGGASAEVMAAGLEIILGDEQVKSVFVNVFGGITSCDAVAEGIVKALEILGDSATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NV+ G R+++E+    V+ A  +D  A K
Sbjct: 343 PLVVRLDGNNVEEGRRILSEANHPLVVQATTMDSGADK 380


>gi|227833887|ref|YP_002835594.1| succinyl-CoA synthetase beta subunit [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262184893|ref|ZP_06044314.1| succinyl-CoA synthetase subunit beta [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227454903|gb|ACP33656.1| succinyl-CoA synthetase beta subunit [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 394

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/407 (36%), Positives = 227/407 (55%), Gaps = 49/407 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++++EYQA+ L   + VP  KG+V +S   AE A   L  P+ VVK+QI  GGRGK    
Sbjct: 5   VDLYEYQARDLFEAHGVPTLKGIVATSAVQAEEAAAKLGTPVVVVKAQIKTGGRGKA--- 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG  +        G  V  V V +GADI  E Y 
Sbjct: 62  -------GGVKLAHSPAEAAEKANEILGLKI-------KGHTVRKVMVAEGADIAAEYYF 107

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--E 178
           S+L+DRT      + S +GG++IE++A++ P  + K    PL G+T        D L  +
Sbjct: 108 SILLDRTKRRYLAMLSKEGGVEIEKLAEERPDALIKRSFSPLDGMT--------DTLARD 159

Query: 179 LQGQARIDGGDL------FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  +A  D GD+      F  LY  + ++D +L+E+NPL+   +G +  LD KI+ DDNA
Sbjct: 160 MAYEAGFDEGDVAKLVPVFKKLYTVYTEEDATLVEVNPLVKTSSGEIIALDGKITLDDNA 219

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG-- 290
            +RH + ++L+D    D  E++A++  L+Y+ LDG++G + NGAGL M+T+D++   G  
Sbjct: 220 QFRHPEHRDLQDHGATDPLELKAQKMGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGED 279

Query: 291 ----GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
                 PANFLD+GGGA+ + +A   ++I SD  VK + +N+FGGI  CD + KGI+ A 
Sbjct: 280 LSSQPKPANFLDIGGGANAEVMANGLEVILSDPQVKAVFVNVFGGITACDEVAKGIVQAY 339

Query: 347 K-------EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           K       E K   PLV+RL+G N ++G  ++ ++ L  +  ++  D
Sbjct: 340 KILDSEGIEPK---PLVVRLDGNNAELGRTILNDAHLPKLEQVETMD 383


>gi|327310444|ref|YP_004337341.1| succinyl-CoA synthetase subunit beta [Thermoproteus uzoniensis
           768-20]
 gi|326946923|gb|AEA12029.1| Succinyl-CoA synthetase, subunit beta [Thermoproteus uzoniensis
           768-20]
          Length = 382

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 233/401 (58%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+AK +L KY V + +G +  +        + +  P+ V+K+Q+   GRGK    
Sbjct: 1   MKLYEYEAKEILAKYGVKIPRGRLALTPEEVRKIAEEIGKPV-VLKAQVTVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  + +   +  R++ G T+        G  V  +YV +  ++ RE+YL
Sbjct: 57  -------GGIKVAKTPEEAEALARQMFGMTI-------KGLVVKKIYVTEYQEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +    F+AS  GG+DIEE+AK  P+KI ++ +DP  G+    V ++   L ++
Sbjct: 103 SLIIDRATRRYLFLASPVGGIDIEEIAKKEPEKIKRVYVDPFEGLRDFHVRAIVSWLAIK 162

Query: 181 -GQARID-GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            G  + D    +   +Y+A  + +  L+E NPL + K G +  LD++I  DDN+L++H D
Sbjct: 163 PGTPQWDQAASIVRAMYRAMTELEAELVESNPLAVTKTGEVVPLDARIIVDDNSLFKHPD 222

Query: 239 IQELRDVSEEDSREIE--AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++  +    D  E E  A++   +Y+ LDG++G + NGAGL M+TMD++  +GG PANF
Sbjct: 223 LEKAYEEDPRDVTEFERYAQKIGFNYVELDGDVGIIGNGAGLTMSTMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPL 355
           LD+GGGA +D V  A K++     VK I INIFGGI R D +  GI +A+ E    N  +
Sbjct: 283 LDIGGGASRDVVKEALKVLLRHPRVKSIFINIFGGITRADEVAAGIEAALAETGGTNKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           ++R++G N ++G +++A+ G+ +    + ++AAQK V A +
Sbjct: 343 IVRMKGTNEELGRQMLAKLGIPLYE--NAEEAAQKAVEAAR 381


>gi|13235360|emb|CAC33726.1| Succinyl-CoA synthetase beta subunit [Rickettsia typhi]
          Length = 248

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/246 (51%), Positives = 169/246 (68%)

Query: 151 PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           P+KI K  +DP  G+    +  +   L  +        ++  ++Y AF + D + +EINP
Sbjct: 3   PEKIIKFAVDPATGLQDFHMRGIAYGLGFKDSQAKQMKEIVKSVYNAFIETDATQIEINP 62

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           LII     L  LD+KI+FDDN L++H +I  +RD  EED  E  A    LSY+ +DGNIG
Sbjct: 63  LIINSYKNLLALDAKITFDDNGLFKHPNITAMRDHDEEDPLETRAANAGLSYVKMDGNIG 122

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
           CMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V  A KII SD  VKGIL+NIFG
Sbjct: 123 CMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERVKEALKIILSDKEVKGILVNIFG 182

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           GIMRCD++ +GI++A +++ I +PLV+RL G NV+ G  +++ S L +I A DL DAA K
Sbjct: 183 GIMRCDIIAEGIIAAARDIGITVPLVVRLAGTNVEKGKEILSNSNLKIIPAHDLADAANK 242

Query: 391 IVHAVK 396
           IV A++
Sbjct: 243 IVEAIR 248


>gi|291298133|ref|YP_003509411.1| succinyl-CoA synthetase subunit beta [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567353|gb|ADD40318.1| succinyl-CoA synthetase, beta subunit [Stackebrandtia nassauensis
           DSM 44728]
          Length = 392

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 220/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ +AL  ++ VPV  G V  +V  A      L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRALFARHGVPVLDGGVAETVEEAVELAGKLDGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++         ILG  +        G  V+ V +   ADI  E Y 
Sbjct: 57  -------GGVKLADNVDEAREHATNILGMDI-------KGHTVHKVMLTVTADIDTEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAST+GG++IE+VA + P K+ KL I+ L GV +     + D     
Sbjct: 103 SFLLDRANRTFLCIASTEGGVEIEQVAAETPDKVLKLPINALTGVDATVAGEIADKAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    D+F  L++ F  +D +L+E+NPL+    GR   LD+K++ D+NA +RHLD  
Sbjct: 163 ADLRPQLVDMFVKLWETFVSEDATLVEVNPLVRTPEGRALALDAKVTLDENAAFRHLDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELEDKAAVDPLEQRAKEADLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHDNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----K 350
           FLD+GGGA    +A+  +++ SD +VK + +N+FGGI  CD +  GI+ A+  +      
Sbjct: 283 FLDIGGGASAAVMASGLEVVLSDPAVKSVFVNVFGGITACDEVANGIVGALTMLAERGET 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++ PLV+RL+G N ++G  ++  +   ++T +D  D
Sbjct: 343 VDKPLVVRLDGNNAELGRSILDGANHPLVTRVDTMD 378


>gi|21264526|sp|O28732|SUCC1_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-1;
           AltName: Full=Succinyl-CoA synthetase subunit beta-1;
           Short=SCS-beta-1
          Length = 382

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/397 (37%), Positives = 221/397 (55%), Gaps = 24/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  K+ + V +G V +S   AE   + L G + VVK+QI  GGRGK    
Sbjct: 1   MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGRV-VVKAQILVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +S +      ++ILG T+        G RV  V VE+  ++ +E Y+
Sbjct: 57  -------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VD++S +   I S  GGMD+EE+A  +P  I ++  DPL G+   +V         +
Sbjct: 103 GYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      D+   L       +  L EINPL +   G L   D++++ DDNALYRH ++ 
Sbjct: 163 GEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVTDEGFL-AADARLNTDDNALYRHPELA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+ +EED  E EA+   ++Y+ L GN+G + NGAGLAMATMDII L GG PANFLD G
Sbjct: 222 ELREATEEDPLEREARLKGINYVHLGGNVGVIANGAGLAMATMDIINLMGGKPANFLDTG 281

Query: 301 GG-ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  K+      +  D +V+ + INI+  I RC+ + +GI+ A+ E    +PLV++L
Sbjct: 282 GGLADPVKMKNCLLHVLKDPNVRVVFINIYAEITRCEKVAEGIILALDEAPRKVPLVVKL 341

Query: 360 EGANVDIGNRLI----AESGLNVITAIDLDDAAQKIV 392
            G N +IG  ++    +E G  +     +++ A+K V
Sbjct: 342 AGTNEEIGREMLERYSSEKGAEIHFVESIEEGARKAV 378


>gi|126465378|ref|YP_001040487.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Staphylothermus
           marinus F1]
 gi|189030221|sp|A3DLR9|SUCC_STAMF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126014201|gb|ABN69579.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Staphylothermus
           marinus F1]
          Length = 379

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 229/401 (57%), Gaps = 27/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++AK + +   +PV +G +  +   A    + + G + V+K+Q+  G RG     
Sbjct: 1   MKLYEFEAKEIAKNNGIPVPRGGIAKTPEEARIVAEKIGGEV-VLKAQVLVGRRGLA--- 56

Query: 61  ELPADSKGGVRVES-SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  GGV   S SL++      E +   L +K+    G +V  + VE+   I +E Y
Sbjct: 57  -------GGVLFASNSLEA------EKVARELFSKRV--RGEKVELILVEEKICIDKEYY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL +DR++  + ++ S  GG++IEE+ K YP K+ ++ +DP+IG            L L
Sbjct: 102 LSLTIDRSNREIVYLVSPLGGVEIEELVKKYPDKLLRIRVDPVIGYKPYMSRLAAKFLGL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +       +  ++Y    + D  L+E NPL+   +  +  +D+KI+ DDN+LYRH++ 
Sbjct: 162 PKELWPSMHKIMNSMYNIMKNYDADLVEFNPLVKTCSNEIVAVDAKITIDDNSLYRHIEF 221

Query: 240 QEL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            E   R++SE    E  AK+   SY+ LDG+IG M NGAGL MATMD++  YGG PANFL
Sbjct: 222 AEKYGRELSE---MEAIAKKLGFSYVELDGDIGIMCNGAGLTMATMDMVAYYGGRPANFL 278

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGA +++V  A K++     VK +L+NIFGGI RC+ + +GI+ AV+E  +  P+V+
Sbjct: 279 DIGGGASRERVREAAKLLLKHDKVKVLLVNIFGGITRCNEVARGIIEAVEETGVKKPIVI 338

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           RL G N +IG RL+ E G +V +  + DDA +K V   K +
Sbjct: 339 RLLGTNEEIGRRLLEEKGYSVFS--EADDAVKKAVEIAKNL 377


>gi|11499135|ref|NP_070369.1| succinyl-CoA synthetase, beta subunit (sucC-1) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649021|gb|AAB89706.1| succinyl-CoA synthetase, beta subunit (sucC-1) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 383

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/397 (37%), Positives = 221/397 (55%), Gaps = 24/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  K+ + V +G V +S   AE   + L G + VVK+QI  GGRGK    
Sbjct: 2   MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGRV-VVKAQILVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +S +      ++ILG T+        G RV  V VE+  ++ +E Y+
Sbjct: 58  -------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VD++S +   I S  GGMD+EE+A  +P  I ++  DPL G+   +V         +
Sbjct: 104 GYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFE 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      D+   L       +  L EINPL +   G L   D++++ DDNALYRH ++ 
Sbjct: 164 GEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVTDEGFL-AADARLNTDDNALYRHPELA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+ +EED  E EA+   ++Y+ L GN+G + NGAGLAMATMDII L GG PANFLD G
Sbjct: 223 ELREATEEDPLEREARLKGINYVHLGGNVGVIANGAGLAMATMDIINLMGGKPANFLDTG 282

Query: 301 GG-ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  K+      +  D +V+ + INI+  I RC+ + +GI+ A+ E    +PLV++L
Sbjct: 283 GGLADPVKMKNCLLHVLKDPNVRVVFINIYAEITRCEKVAEGIILALDEAPRKVPLVVKL 342

Query: 360 EGANVDIGNRLI----AESGLNVITAIDLDDAAQKIV 392
            G N +IG  ++    +E G  +     +++ A+K V
Sbjct: 343 AGTNEEIGREMLERYSSEKGAEIHFVESIEEGARKAV 379


>gi|229821498|ref|YP_002883024.1| succinyl-CoA synthetase, beta subunit [Beutenbergia cavernae DSM
           12333]
 gi|259511777|sp|C5BZT2|SUCC_BEUC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229567411|gb|ACQ81262.1| succinyl-CoA synthetase, beta subunit [Beutenbergia cavernae DSM
           12333]
          Length = 395

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/390 (35%), Positives = 227/390 (58%), Gaps = 27/390 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G+V ++V  A +A +TL    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDVFEKHGVPVLGGIVATTVDEARAAAETLTSGAGSVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S +       +ILG  +        G  V+ V + +GA I  E
Sbjct: 61  ----------GGVKLARSPEEAAEAAEQILGMDI-------KGHTVHRVMIAEGASIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR +     +AS +GG++IE++A + P+ + ++ +DPL+G+ +   A +    
Sbjct: 104 YYFSVLLDRANRSYLAMASVEGGVEIEQLAVERPEALARVAVDPLVGIDAAKAAEIVAAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                      D+   L+  +  +D +L+E+NPL+   +GR+  LD K++ DDNA +RH 
Sbjct: 164 GFADDVAGAVADVIQKLWTVYDAEDATLVEVNPLVRTTDGRVIALDGKVTLDDNAEFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA- 292
           +  EL D +  D  E +AK H+L+Y+ LDG +G + NGAGL M+T+D++    + +GG  
Sbjct: 224 EHAELEDAASADPLEAKAKAHDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA    +AA   +I  D  VK + +N+FGGI  CD + +GI+ A++ +  K
Sbjct: 284 PANFLDIGGGASAAVMAAGLDVILGDPQVKSVFVNVFGGITACDEVARGIVQALEILGDK 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVIT 380
            N PLV+RL+G  V+ G  ++AE+   ++T
Sbjct: 344 ENKPLVVRLDGNAVEEGRAILAEANHPLVT 373


>gi|134103099|ref|YP_001108760.1| succinyl-CoA synthetase subunit beta [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291003958|ref|ZP_06561931.1| succinyl-CoA synthetase subunit beta [Saccharopolyspora erythraea
           NRRL 2338]
 gi|189081792|sp|A4FP60|SUCC_SACEN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|133915722|emb|CAM05835.1| putative succinyl-CoA synthetase beta subunit [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 389

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 142/393 (36%), Positives = 218/393 (55%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VP   G V +    A++A + L GP+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKELFASHGVPTLPGSVATDSDGAKAAAEQLGGPV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +     +    ILG  +        G     V +   +DI+ E Y 
Sbjct: 57  -------GGVKLAENPDEAKTKAEAILGLDI-------KGHITRRVLITTASDIVDEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + K+ IDP+ GV       + D  +  
Sbjct: 103 SFLLDRANRNFLAMASVEGGMEIEEVAATKPEALAKIAIDPIQGVDEAKAREIVDAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L++ F  +D +L+EINPL+    G++  LD K++ D+NA +R     
Sbjct: 163 AEIADQVVEVVVKLWETFVAEDATLVEINPLVKDPQGKIIALDGKVTLDENASFRQPKQA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII-----KLYGGAPAN 295
           EL D   ED  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++     K  G  PAN
Sbjct: 223 ELVDKDAEDPLEAKAKAKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D +VK + +N+FGGI  CD +  GI+ A+K +  +   
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDPAVKSVFVNVFGGITACDAVANGIVQALKILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G R++AE+    +T +D  D
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPAVTMVDTMD 375


>gi|298345240|ref|YP_003717927.1| succinyl-CoA synthetase subunit beta [Mobiluncus curtisii ATCC
           43063]
 gi|298235301|gb|ADI66433.1| succinyl-CoA synthetase beta chain [Mobiluncus curtisii ATCC 43063]
          Length = 386

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 140/392 (35%), Positives = 221/392 (56%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  G V S+V  A++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGVPVLPGKVASTVEEAKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++   ++ + ILG  +        G  V  V V  GADI RE Y 
Sbjct: 58  -------GGVKLARSVEEAAANAQAILGMNI-------KGHTVYRVMVVAGADIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+       + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALAKVPI-PASGMDVTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 PETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHSEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   ++T ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLVTMMETMD 374


>gi|84998768|ref|XP_954105.1| succinyl-coA ligase, subunit [Theileria annulata]
 gi|65305103|emb|CAI73428.1| succinyl-coA ligase, subunit, putative [Theileria annulata]
          Length = 433

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 214/397 (53%), Gaps = 8/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAK---GVVISSVHAAESAIKTLPG-PLYVVKSQIHAGGRGK 56
           +N+ EY    +L++  V V +            A  +I+ + G P  V+K+ +  GGRGK
Sbjct: 36  LNVSEYIGMTVLKRNGVRVPEFRSATTPEEAFEASKSIQQVTGKPELVIKALVLTGGRGK 95

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F         GV V +S +S     + +LG+ L TKQT   G   + V +     +  
Sbjct: 96  GVFSNTGFK---GVEVVNSPESASECAKGMLGNYLTTKQTVGKGLLCSQVLLAQKLSLKN 152

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS  +DR SG +  IA+  GG ++EE+A +YP  +  L + PL G+T E+   L   
Sbjct: 153 ERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHEYPDSVLTLSVSPLTGLTDENTEQLVKQ 212

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L      R         +Y  F   D +LLE+NPL+   +G +   DSK+  DDNA YR 
Sbjct: 213 LSFTENVRDQVVAAVKQIYNTFVQFDGTLLEVNPLVETDSGEILACDSKLIVDDNAKYRQ 272

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++ ++  V+     E EA +  L+YI+LDGN+ C+VNGAGLAMATMD+I+ +GG  ANF
Sbjct: 273 KELFDMTPVTRTREEE-EADRAGLNYISLDGNVACIVNGAGLAMATMDLIQHHGGRAANF 331

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG +  + ++ A +I+ SD+  K +L+NI GGI+RCD   +  + A K +   +P+V
Sbjct: 332 LDVGGNSTSETLSKALEIVNSDTRAKVLLVNIVGGIVRCDKFAESFVEASKTLSRQLPVV 391

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +RL+G   +   +L+ ES +  +   D D   +  V 
Sbjct: 392 IRLQGTRAEAAKKLLNESNIPHLFCTDFDSVCKSAVE 428


>gi|294631006|ref|ZP_06709566.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. e14]
 gi|292834339|gb|EFF92688.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. e14]
          Length = 393

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/411 (36%), Positives = 229/411 (55%), Gaps = 33/411 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAAREITERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + E   +I+ E Y
Sbjct: 57  -------GGVKLAATPDEAVARSTDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGM+IEEVA   P+ + K+ ID + GVT E    +    + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMEIEEVAATRPEAVAKMPIDAIDGVTLEKAREIVAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+  F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH D 
Sbjct: 163 PAEVADKVADVLVKLWDTFIKEDALLVEVNPLAKVASGEVIALDGKVSLDDNAEFRHPDF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELHDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV----- 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK---IVHAVK 396
           K+  PLV+RL+G N ++G +++ ++   ++  +D +D AA K   + HA K
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILTDANHPLVQRVDTMDGAADKAAELAHAAK 393


>gi|241068532|ref|XP_002408461.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
 gi|215492449|gb|EEC02090.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
          Length = 210

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/208 (58%), Positives = 158/208 (75%)

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
           ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I  +RD  EE
Sbjct: 3   EIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFKHPNITAMRDHDEE 62

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           D  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V
Sbjct: 63  DPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERV 122

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
             A KII SD  V+GIL+NIFGGIMRCD++ +GI++A KE+ I +PLV+RL G NV+ G 
Sbjct: 123 KEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKEIGIKVPLVVRLAGTNVEKGK 182

Query: 369 RLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +++ SGL +I A DL DAA KIV A+K
Sbjct: 183 EILSNSGLEIIPAHDLADAASKIVEAIK 210


>gi|284029243|ref|YP_003379174.1| succinyl-CoA synthetase subunit beta [Kribbella flavida DSM 17836]
 gi|283808536|gb|ADB30375.1| succinyl-CoA synthetase, beta subunit [Kribbella flavida DSM 17836]
          Length = 390

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/399 (37%), Positives = 222/399 (55%), Gaps = 34/399 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK +  K+ V    G V+++   A +A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLMEYQAKTVFAKHGVRTTVGEVVTTPEQARAAAEKIGGTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS        REILG  +        G  V  + +   A I  E Y 
Sbjct: 57  -------GGVKLASSPDEAEQKAREILGLDI-------KGHVVKTLNIVPAAAIGEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGM+IEEVA   P  + K+ IDP  GV   D A   ++ E  
Sbjct: 103 SFLIDRANRNYLCIASAAGGMEIEEVAHTNPDAVAKISIDPATGV---DEALAREIAEQA 159

Query: 181 GQAR--IDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G     +D   +    LY+ F  +D SL+E+NPL+ +++G +  LD K++ D+NA +RH 
Sbjct: 160 GYPADVLDAAAVEIAKLYQVFIAEDASLVEVNPLVKLEDGNVEALDGKVTLDENADFRHP 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA- 292
           D  E  D S ED  E  AK   L+Y+ LDG++G + NGAGL M+T+D++    + +GG  
Sbjct: 220 DHAEFEDSSAEDPLEAAAKAKGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEQFGGVK 279

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--- 349
           PANFLD+GGGA  + +A   +II SD  V+ + +N+FGGI  CD +  GI+ A + +   
Sbjct: 280 PANFLDIGGGASAEVMANGLEIIISDPQVESVFVNVFGGITACDAVANGIVQAFELLAGR 339

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              +N PLV+RL+G N + G R++ E+GL  +  +D  D
Sbjct: 340 GEAVNKPLVVRLDGNNAEEGRRILDEAGLAGLERVDTMD 378


>gi|332242026|ref|XP_003270186.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Nomascus leucogenys]
          Length = 452

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/355 (39%), Positives = 205/355 (57%), Gaps = 3/355 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 101 LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 160

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 161 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 217

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 218 AIAMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 277

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 278 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 337

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 338 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 397

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           GGA   +V  AFK+ITSD  V+  L      +++   +V     A  +VK  +P+
Sbjct: 398 GGATVHQVTEAFKLITSDKKVRAGLDTFLYHVVKLSEIVTLAKQAHVDVKFQLPI 452


>gi|315655662|ref|ZP_07908560.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii ATCC 51333]
 gi|315489726|gb|EFU79353.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii ATCC 51333]
          Length = 386

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/392 (35%), Positives = 220/392 (56%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  G V S+V   ++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGVPVLPGKVASTVEEVKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++   ++ + ILG  +        G  V  V V  GADI RE Y 
Sbjct: 58  -------GGVKLARSVEEAAANAQAILGMNI-------KGHTVYRVMVVAGADIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+       + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALVKVPI-PASGMDVTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 PETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   ++T ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLVTMMETMD 374


>gi|152967942|ref|YP_001363726.1| succinyl-CoA synthetase subunit beta [Kineococcus radiotolerans
           SRS30216]
 gi|151362459|gb|ABS05462.1| succinyl-CoA synthetase, beta subunit [Kineococcus radiotolerans
           SRS30216]
          Length = 411

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/395 (35%), Positives = 226/395 (57%), Gaps = 24/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L   + VPV  G V ++   A +A + + G   VVK+Q+  GGRGK    
Sbjct: 21  VDLFEYQARDLFAAHGVPVLDGRVATTPEEARAAAEAMGGGTVVVKAQVKTGGRGKA--- 77

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      REILG  +        G  V+ V + +GA I  E Y 
Sbjct: 78  -------GGVKLAHSPEEAGERAREILGMDI-------KGHTVHQVMIAEGARIAEEFYF 123

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     + S +GGM+IE++A + P+ + ++ +D L G+ +   A + +     
Sbjct: 124 SVLLDRSNRTYLAMCSVEGGMEIEQLAVERPEALARVPVDALTGIDAAKAAEIVEAAGFA 183

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R    D+   L+  F  +D +L+E+NPL+  ++G +  LD K++ D+NA +RH    
Sbjct: 184 PELREKVADVVVKLWGVFTAEDATLVEVNPLVRTEDGSIVALDGKVTLDENADFRHPAHA 243

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
           EL D +  D  E +AK+  L+Y+ LDG +G + NGAGL M+T+D++   G A     PAN
Sbjct: 244 ELVDAAAADPLEAKAKELGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 303

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +A    +I +D+ VK + +N+FGGI  CD + KGI++A+  +  +   
Sbjct: 304 FLDIGGGASAQVMANGLDVILNDAQVKSVFVNVFGGITACDEVAKGIVAALGILGDEATK 363

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           PLV+RL+G NV+ G R++AE+   ++T +D  D A
Sbjct: 364 PLVVRLDGNNVEEGRRILAEAAHPLVTVVDTMDGA 398


>gi|23308950|ref|NP_601764.2| succinyl-CoA synthetase subunit beta [Corynebacterium glutamicum
           ATCC 13032]
 gi|24212428|sp|Q8NMK7|SUCC_CORGL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21325338|dbj|BAB99959.1| Succinyl-CoA synthetase beta subunit [Corynebacterium glutamicum
           ATCC 13032]
          Length = 398

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/391 (36%), Positives = 228/391 (58%), Gaps = 26/391 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   + VPV KG+V S+  AA  A + + G L VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGG-LTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  +          ILG  +        G  VN V V  GADI  E Y 
Sbjct: 57  -------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ +DPL G+  +    +      +
Sbjct: 103 SILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +++ + +++ +L+E+NPL++  +G +  LD KI+ DDNA +RH +  
Sbjct: 163 TEVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFRHDNRG 222

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PA 294
            L + +   D  E++AK+++L+Y+ LDG++G + NGAGL M+T+DI+    + +GG  PA
Sbjct: 223 ALAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNGAGLVMSTLDIVAAAGERHGGQRPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   +I  DS V+ + +N+FGGI  CDV+ KGI+ A+  +  +  
Sbjct: 283 NFLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFGGITACDVVAKGIVGALDVLGDQAT 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAID 383
            PLV+RL+G NV  G R++AE    ++T ++
Sbjct: 343 KPLVVRLDGNNVVEGRRILAEYNHPLVTVVE 373


>gi|117927589|ref|YP_872140.1| succinyl-CoA synthetase subunit beta [Acidothermus cellulolyticus
           11B]
 gi|189046869|sp|A0LRU4|SUCC_ACIC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117648052|gb|ABK52154.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidothermus
           cellulolyticus 11B]
          Length = 392

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 225/402 (55%), Gaps = 29/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L   + VP+  G V  +   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAAHGVPITPGEVAENPDQAADIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     +  +    ILG  +        G RV+ V V    DI  E Y+
Sbjct: 57  -------GGVKLADDADAAAAAAEAILGMEI-------RGHRVHRVLVTTAVDIAHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + LVDR+      + S +GG++IE+VA + PQ I ++ ID   GV +   A + D +   
Sbjct: 103 AFLVDRSRRSFLAMGSAEGGVEIEQVAAENPQAIVRVPIDATEGVDATLAARIADDIGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R +   +   L++AF  +D SL+E+NPL+   + RL  LD K++ DDNA +RH D  
Sbjct: 163 AAVRDEAVRILRGLWEAFQAEDASLVEVNPLVRTLDDRLIALDGKVTLDDNADFRHPDRA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGG-APAN 295
              D S  D  E +AK   L Y+ LDG +G + NGAGL M+T+D++    + YGG  PAN
Sbjct: 223 RFADPSAADPLEAKAKAAGLHYVKLDGEVGVIGNGAGLVMSTLDVVAYAGETYGGIRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----K 350
           FLD+GGGA  + +AA   ++ +D +V+ +L+N+FGGI  CD + +GI++A + +     +
Sbjct: 283 FLDIGGGASAEVMAAGLTVVLADPAVRAVLVNVFGGITACDAVARGIVAAFENLIAAGER 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQKI 391
           I++PLV+RL+G     G  ++A + L  +  ++ +DDAA+++
Sbjct: 343 IDVPLVVRLDGNRAAEGRAILAAAQLPRVEQVETMDDAARRV 384


>gi|325283198|ref|YP_004255739.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           proteolyticus MRP]
 gi|324315007|gb|ADY26122.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           proteolyticus MRP]
          Length = 386

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/385 (37%), Positives = 210/385 (54%), Gaps = 28/385 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAES--AIKTLPGPLYVVKSQIHAGGRGKGR 58
           M +HEYQ K +LR + V V +G V    H  E   AI    G   VVK+Q+H GGRGK  
Sbjct: 1   MKLHEYQGKEILRDFGVNVQEGKV---AHTPEEVKAIAEEYGQPVVVKAQVHVGGRGKA- 56

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LR 116
                    GGV+   + +  + + + ILG  +        G  V  V V    DI    
Sbjct: 57  ---------GGVKFSPTAEKALENGQNILGMDI-------KGLTVEKVLVTKAVDIDAGT 100

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ ++VDR       +AS +GGM+IEEVA   P+KI K  +DP+ G+   +   +   
Sbjct: 101 EYYVGMIVDRNVQSYTLMASAEGGMEIEEVAAATPEKIIKHRVDPVTGLRPYEAREVAIK 160

Query: 177 LELQGQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
              +G   +I   D+   + KA  ++D  L+EINPL + ++G    LD+K   DDNA+YR
Sbjct: 161 AGFKGNLNKI--ADMMVKMSKAALERDAVLVEINPLFVDESGTPLALDTKFEIDDNAMYR 218

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           H D+   R++S E   E+EA ++  +Y+ LD GN+G + NGAG+ M T+D++   G  PA
Sbjct: 219 HQDVAHYRELSAEHPLEVEASEYGFAYVKLDDGNVGVLGNGAGIVMTTLDVVNRAGAKPA 278

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLD+GGGA  D V  A K+++ D  VK I INIFGGI R D + KG++ A+ E  +  P
Sbjct: 279 NFLDIGGGAKADVVYNAVKLVSKDPDVKAIFINIFGGITRADEVAKGVIQALDEGILTKP 338

Query: 355 LVMRLEGANVDIGNRLIAESGLNVI 379
           + MR+ G   D    L+AE   ++I
Sbjct: 339 VRMRIAGTAEDEAKALLAEKNSDLI 363


>gi|325962277|ref|YP_004240183.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323468364|gb|ADX72049.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 389

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 222/402 (55%), Gaps = 34/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAYTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S          ILG  +        G  V  V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKSADEAFEHATNILGMDI-------KGHTVKKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S+L+DR +     + S +GGM+IE++A + P+ + K+ IDP +G+      E VA+    
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFP 162

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL+G+       +   L+  F  +D +L+E+NPL+    G +  LD K+S D+NA +RH
Sbjct: 163 EELRGKVAA----VILKLWDVFKKEDATLVEVNPLVKTGAGEIVALDGKVSLDENAEFRH 218

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG----- 291
                L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G      
Sbjct: 219 AKHALLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNV 278

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD + KGI+ A+ E+  
Sbjct: 279 KPANFLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVAKGIVGALAELGH 338

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
             N PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K
Sbjct: 339 TANKPLVVRLDGNNVEEGRRILNEANHPLVTLAATMDEGADK 380


>gi|297192594|ref|ZP_06909992.1| succinyl-CoA synthetase subunit beta [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297151419|gb|EFH31148.1| succinyl-CoA synthetase subunit beta [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 393

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/397 (36%), Positives = 223/397 (56%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  VN V + E   +I  E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVNKVMIAETAPEIAEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS +GGMDIEEVA   P+ + K+ +D   GVT E  A +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVEGGMDIEEVAATKPEALAKVPVDANEGVTKEKAAEIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+K F  +D  L+E+NPL  + +GR+  LD K+S D+NA +R  D 
Sbjct: 163 PAEVADQVADILVTLWKTFIAEDALLVEVNPLAKVADGRVIALDGKVSLDENADFRQPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHDNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|256831911|ref|YP_003160638.1| succinyl-CoA synthetase, beta subunit [Jonesia denitrificans DSM
           20603]
 gi|256685442|gb|ACV08335.1| succinyl-CoA synthetase, beta subunit [Jonesia denitrificans DSM
           20603]
          Length = 388

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/393 (34%), Positives = 222/393 (56%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  GVV ++   A +  + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGVVATTPQEARNGAEQLGGGTVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      +EILG  +        G  V+ V +  GA I +E Y+
Sbjct: 58  -------GGVKLAHSPQEAHDRAQEILGMDI-------KGHTVHRVMIAQGASIDQEFYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     +AS +GGM+IE++A + P+ + ++ +DP +G+       +       
Sbjct: 104 SILLDRANRSYLAMASVEGGMEIEQLAVERPEALARVAVDPTVGIDDAKAIEIAHAANFA 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L+  + D+D +L+E+NPL++  +G +  LD K+S DDNA +RH D  
Sbjct: 164 PELTAKVVEVLKKLWVVYRDEDATLVEVNPLVLTSDGDIVALDGKVSLDDNASFRHPDHG 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           +L D    D  E +A++++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 224 DLADSEATDPLEAKAQENDLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGERHGGVRPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +      
Sbjct: 284 FLDIGGGASASVMAAGLDVILGDPQVKSVFVNVFGGITACDEVANGIVTALDILGDTATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NVD G  ++  +   ++T  D  D
Sbjct: 344 PLVVRLDGNNVDEGRAILRAAAHPLVTLADTMD 376


>gi|146323555|ref|XP_746427.2| succinyl-CoA synthetase beta subunit [Aspergillus fumigatus Af293]
 gi|129555252|gb|EAL84389.2| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus Af293]
          Length = 407

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 223/387 (57%), Gaps = 13/387 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +A   + +  V +G V+++   AE+ + ++  P  V+KSQI AGGRGKG+   + +D KG
Sbjct: 26  RASFPQTSRAVPRGYVVTNPGDAEAVVSSIGAP-SVLKSQILAGGRGKGK---MSSDGKG 81

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+R+ ++ +    +   +LG  L T+QT P G  V  +Y+    D+ +E YL+L  DR  
Sbjct: 82  GIRIVATPEQAFQNASRMLGHYLATQQTPPHGLLVKKLYIYKAVDVEQEFYLALTFDRER 141

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                + S QGG++IE        K+ +   +   G+T E +A +        +      
Sbjct: 142 YSPVILISDQGGVNIE----SNQDKLHRFWFNLSRGITGETMAGIQKQSCFTDKEMPTIE 197

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI--QELRDVS 246
            +   + K F ++D  LLE+NPL+    G    LD+K  FD+ A +R  ++  +E R   
Sbjct: 198 SIIRQMIKLFEERDAILLELNPLVRTPEGSFVCLDAKFEFDNAAQFRQPEVFSKEERMPG 257

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
            ED  E EA+ H L YI L+G+IG +VNGAGLAMAT D+I L+GG  ANFLD+GG A  +
Sbjct: 258 FED--EYEAQMHGLVYIRLNGHIGNIVNGAGLAMATNDLINLHGGKCANFLDIGGKATTE 315

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVD 365
            +  AF+I++ D  V+GI +NIFGGI+RCD++ + I+ A   +    +P+V+RL+G N D
Sbjct: 316 TLLKAFEILSRDQQVRGIFVNIFGGIVRCDMIAESIIQAAHTLGGFRVPVVVRLQGTNCD 375

Query: 366 IGNRLIAESGLNVITAIDLDDAAQKIV 392
              + ++ S L++ T  DL+ AA++I+
Sbjct: 376 AAMKRLSTSELDISTETDLEKAAKRII 402


>gi|126460262|ref|YP_001056540.1| succinyl-CoA synthetase subunit beta [Pyrobaculum calidifontis JCM
           11548]
 gi|189081777|sp|A3MWQ7|SUCC_PYRCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126249983|gb|ABO09074.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pyrobaculum
           calidifontis JCM 11548]
          Length = 382

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/404 (36%), Positives = 222/404 (54%), Gaps = 31/404 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  KY V +  G +  +      A + + GP  V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFAKYGVKIPPGRLALTPEEVRKAAEEM-GPPVVLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V   ++      +++ G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKVAKRVEEAYELSKQMFGMNI-------KGLTVRKLYVTKYLEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +    F+AS  GGMDIEE+AK  P+KI ++ +DP +G+    V S+   L   
Sbjct: 103 SLIIDRATRRFLFLASPVGGMDIEEIAKTTPEKIKRVYVDPFVGLRDYHVRSIVSWLGFS 162

Query: 181 -GQARID-GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            G A+      +   +YK   D D  L+E NPL + K G +  LD+++  DDNAL+RH  
Sbjct: 163 PGTAQWQQAASIVQAMYKIAVDYDAELVESNPLALTKEGDVVPLDARVIVDDNALFRH-- 220

Query: 239 IQELRDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
             EL    EED R+I      AK+    Y+ LDG+IG + NGAGL MATMD++  +GG P
Sbjct: 221 -PELEKALEEDPRDITEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFGGRP 279

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KIN 352
           ANFLD+GGGA ++ V  A K++ +    K I INIFGGI R D +  G+  A++      
Sbjct: 280 ANFLDIGGGASREVVREAVKVLLNHPRAKVIFINIFGGITRADEVAYGVKEALQAAGGTT 339

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +V+R++G N ++G  ++AE G+ +  +   ++AA+K V   K
Sbjct: 340 KKIVVRMKGTNEELGRAILAEIGVPLFESA--EEAAKKAVELAK 381


>gi|213621814|ref|ZP_03374597.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 216

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 122/208 (58%), Positives = 164/208 (78%)

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++E+RD S+ED
Sbjct: 8   IFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQED 67

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
            RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVGGGA +++V 
Sbjct: 68  PREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVT 127

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLEG N ++G +
Sbjct: 128 EAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAK 187

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAVKG 397
            +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 188 KLADSGLNIIAAKSLTDAAQQVVAAVEG 215


>gi|184201464|ref|YP_001855671.1| succinyl-CoA synthetase subunit beta [Kocuria rhizophila DC2201]
 gi|226734961|sp|B2GM49|SUCC_KOCRD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|183581694|dbj|BAG30165.1| succinyl-CoA synthetase beta chain [Kocuria rhizophila DC2201]
          Length = 389

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/407 (34%), Positives = 227/407 (55%), Gaps = 29/407 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G+V ++   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEKHGVPVLAGIVATTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + +      ++ILG  +        G  V+ V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTPEEAYEYAQQILGMDI-------KGHTVHRVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P  + ++ + P  G+T      + +  +  
Sbjct: 103 SVLLDRANRSYLAMCSVEGGMEIEQLAVERPDALARVDVSPADGITEAKAREIVEQAKFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L + +  +D +L+E+NPL+   +G +  LD K+S DDNA +RH +  
Sbjct: 163 AETAEKVIPVLVKLGEVYAKEDATLVEVNPLVKTGDGEILALDGKVSLDDNAAFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  D  E +AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELADKTTADPLEEKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDPQVKSVFVNVFGGITACDAVANGIVKALEILGDSATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA----AQKIVHAVK 396
           P+V+RL+G NVD G  ++ E+   +IT  D  DA    A ++ HA K
Sbjct: 343 PIVVRLDGNNVDEGRAILREANHPLITTADTMDAGADKAAELAHAAK 389


>gi|295396404|ref|ZP_06806566.1| succinyl-CoA ligase subunit beta [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294970706|gb|EFG46619.1| succinyl-CoA ligase subunit beta [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 388

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 143/400 (35%), Positives = 226/400 (56%), Gaps = 29/400 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV K  V S+   A+ A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEKHGVPVLKAKVASTPEEAQKAAEELGGGTVVVKAQVKIGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +         EILG  +        G   + V + +GADI  E Y 
Sbjct: 58  -------GGVKLAHNPAEAKERAEEILGLDI-------KGHITHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGMDIE +A + P+ + K+ +D + G+       +   +E  
Sbjct: 104 SVLLDRANRTFLAMCSKEGGMDIETLAAERPEALAKVPVDAIDGIDEAKAKQIA--VEAG 161

Query: 181 GQARIDG--GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             A   G    +   L+  F ++D +L+E+NPL+   +  +  LD K+S DDNA +RH +
Sbjct: 162 FDAETAGLVTPVLQQLWTVFKEEDATLVEVNPLVKTGDNTILALDGKVSLDDNASFRHEE 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-P 293
            +ELRD+  ED  E++AK+ +L+Y+ LDG +G + NGAGL M+T+D++    + +GG  P
Sbjct: 222 HEELRDIQAEDPLELKAKKLDLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGEKHGGVKP 281

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GGGA  + +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ +  N 
Sbjct: 282 ANFLDIGGGASAEVMANGLDVILGDDQVKSVFVNVFGGITACDQVANGIVKALEILGDNA 341

Query: 354 --PLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
             PLV+RL+G  V+ G  ++A++   ++T +D +D  A K
Sbjct: 342 TKPLVVRLDGNAVEEGREILAKANHPLVTTVDSMDGGADK 381


>gi|256380494|ref|YP_003104154.1| succinyl-CoA synthetase subunit beta [Actinosynnema mirum DSM
           43827]
 gi|255924797|gb|ACU40308.1| succinyl-CoA synthetase, beta subunit [Actinosynnema mirum DSM
           43827]
          Length = 389

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/393 (36%), Positives = 218/393 (55%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G V S+   A++  + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKDLFAAHGVPVLPGEVASTPAEAKAIAEQL-GTTVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++          ILG  +        G  V+ V V   +DI  E Y 
Sbjct: 57  -------GGVKLATTPAETEEKATGILGLDI-------KGHTVHRVLVTPASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + K+ ID + GV       +    +  
Sbjct: 103 SFLLDRANRTFLAMASVEGGMEIEEVAVKNPEALAKIAIDAVEGVDRAKADEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    L++ F  +D +L+E+NPL+    G++  LD K++ DDNA +RH    
Sbjct: 163 AEVADQVADTIVKLWETFVAEDATLVEVNPLVRDPEGKIVALDGKVTLDDNASFRHPAHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII-----KLYGGAPAN 295
           EL D   ED  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++     K  G  PAN
Sbjct: 223 ELVDKQAEDPLEAKAKEKDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHKGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A   +II  D+ V+ + +N+FGGI  CD +  GI+ A++ +  +   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDADVRSVFVNVFGGITSCDAVANGIVKALEILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G R++AE+   ++T +D  D
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVDTMD 375


>gi|296169711|ref|ZP_06851328.1| succinyl-CoA ligase subunit beta [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895608|gb|EFG75305.1| succinyl-CoA ligase subunit beta [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 387

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/398 (35%), Positives = 221/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A   I T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARE-IATEIGRPVMVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKFAATPEDAYEHAKNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+     L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLATARSIAQQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+     ++  LD K++ D NA +RH D  
Sbjct: 163 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRDPKDQILALDGKVTLDANADFRHPDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 EFEDRASTDPLELKAKEHDLNYVKLDGAVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NVD G R++A++    VI A  +D  A K
Sbjct: 343 PLVVRLDGNNVDEGRRILAQANHPLVIQAETMDAGADK 380


>gi|226356091|ref|YP_002785831.1| succinyl-CoA synthetase subunit beta [Deinococcus deserti VCD115]
 gi|259511778|sp|C1CV60|SUCC_DEIDV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226318081|gb|ACO46077.1| putative succinate--CoA ligase (succinyl-CoA synthetase) beta
           subunit [Deinococcus deserti VCD115]
          Length = 385

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 203/375 (54%), Gaps = 21/375 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K +LR++ V V  G V  +        +    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKEILRQFGVNVQDGKVARTPDEVRQIAREYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
                  GGV+   +      +  +ILG  +        G  VN V V    DI    E 
Sbjct: 57  -------GGVKFSPTEDKAFENGEKILGMDI-------KGLTVNKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI K  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSFTLMASAEGGMEIEEVAAATPEKIIKHRVDPVTGLRPYEAREVAIRAG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G       D+   + +A   +D  L+EINPL +  +G    LD+K   DDNA+YRH D
Sbjct: 163 FKGNLN-KIADMMVKMSEAALKRDAVLVEINPLFVGPDGVPLALDTKFEIDDNAMYRHQD 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           + + R++  E   EIEA ++  +Y+ LDGN+G + NGAG+ M ++D++   G  PANFLD
Sbjct: 222 LADWRELEAEHPLEIEASKYGFAYVKLDGNVGVLGNGAGIVMTSLDVVNRAGAKPANFLD 281

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA  + V  A K+++ DS VK I INIFGGI R D + KG++ A+K+  +  P+ MR
Sbjct: 282 IGGGAKAEVVYNAVKLVSKDSDVKAIFINIFGGITRADEVAKGVIQALKDGILTKPVRMR 341

Query: 359 LEGANVDIGNRLIAE 373
           + G   D    L+AE
Sbjct: 342 IAGTAEDEAKALLAE 356


>gi|31792140|ref|NP_854633.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis
           AF2122/97]
 gi|121636876|ref|YP_977099.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989347|ref|YP_002644034.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|260185851|ref|ZP_05763325.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           CPHL_A]
 gi|260204157|ref|ZP_05771648.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           K85]
 gi|289446523|ref|ZP_06436267.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis CPHL_A]
 gi|289573581|ref|ZP_06453808.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis K85]
 gi|59798840|sp|Q7U0Z1|SUCC_MYCBO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081749|sp|A1KH85|SUCC_MYCBP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778444|sp|C1ALT7|SUCC_MYCBT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|31617728|emb|CAD93837.1| PROBABLE SUCCINYL-COA SYNTHETASE (BETA CHAIN) SUCC (SCS-BETA)
           [Mycobacterium bovis AF2122/97]
 gi|121492523|emb|CAL70991.1| Probable succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|224772460|dbj|BAH25266.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|289419481|gb|EFD16682.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis CPHL_A]
 gi|289538012|gb|EFD42590.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis K85]
          Length = 387

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 225/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAK-AIATEIGRPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 163 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGLAM+T+D++      +GG  PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++ E+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADK 380


>gi|29829995|ref|NP_824629.1| succinyl-CoA synthetase subunit beta [Streptomyces avermitilis
           MA-4680]
 gi|29607105|dbj|BAC71164.1| putative succinyl-CoA synthetase beta subunit [Streptomyces
           avermitilis MA-4680]
          Length = 392

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 223/397 (56%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + E   +IL E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ +D + GV+ E    +  + + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVDAVEGVSIEKAREIVALAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL  + +G +  LD K+S D+NA +R  D 
Sbjct: 163 PAEVAEKVAEVLVTLWDTFVAEDALLVEVNPLAKVASGDILALDGKVSLDENAEFRQADH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
             L D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++      +GG  PA
Sbjct: 223 AALEDKASANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++  PLV+RL+G N ++G R+++++   ++  +D  D
Sbjct: 343 EVTKPLVVRLDGNNAELGRRILSDANHPLVQRVDTMD 379


>gi|62391404|ref|YP_226806.1| succinyl-CoA synthetase subunit beta [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326745|emb|CAF21227.1| SUCCINYL-COA SYNTHETASE BETA SUBUNIT [Corynebacterium glutamicum
           ATCC 13032]
          Length = 402

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/391 (36%), Positives = 228/391 (58%), Gaps = 26/391 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L   + VPV KG+V S+  AA  A + + G L VVK+Q+  GGRGK    
Sbjct: 5   VDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGG-LTVVKAQVKVGGRGKA--- 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  +          ILG  +        G  VN V V  GADI  E Y 
Sbjct: 61  -------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYF 106

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ +DPL G+  +    +      +
Sbjct: 107 SILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFE 166

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +++ + +++ +L+E+NPL++  +G +  LD KI+ DDNA +RH +  
Sbjct: 167 TEVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFRHDNRG 226

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PA 294
            L + +   D  E++AK+++L+Y+ LDG++G + NGAGL M+T+DI+    + +GG  PA
Sbjct: 227 ALAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNGAGLVMSTLDIVAAAGERHGGQRPA 286

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   +I  DS V+ + +N+FGGI  CDV+ KGI+ A+  +  +  
Sbjct: 287 NFLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFGGITACDVVAKGIVGALDVLGDQAT 346

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAID 383
            PLV+RL+G NV  G R++AE    ++T ++
Sbjct: 347 KPLVVRLDGNNVVEGRRILAEYNHPLVTVVE 377


>gi|239916964|ref|YP_002956522.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Micrococcus
           luteus NCTC 2665]
 gi|281414578|ref|ZP_06246320.1| succinyl-CoA synthetase subunit beta [Micrococcus luteus NCTC 2665]
 gi|259511786|sp|C5C916|SUCC_MICLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|239838171|gb|ACS29968.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Micrococcus
           luteus NCTC 2665]
          Length = 389

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 138/398 (34%), Positives = 226/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEAHGVPVLAGIVAQTPDEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +        + ILG  +        G  V+ V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEAYEHAKAILGMDI-------KGHTVHQVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A++ P+ + K+ +  L G+ +E    +       
Sbjct: 103 SVLLDRANRTYLAMCSVEGGMEIEQLAEERPEALAKVPVSALTGIDAETAQKIVAEAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R D  ++   L++ F  +D +L+E+NPL+   +G++  LD K+S DDNA +R     
Sbjct: 163 EELRADVAEVIQKLWEVFEKEDATLVEVNPLVKTGDGKILALDGKVSLDDNAEFRQEGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
            L D   ED  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 ALVDERTEDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA+ + +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 283 FLDIGGGANAEVMANGLDVILGDEQVKSVFVNVFGGITACDAVANGIVKALEILGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           PLV+RL+G  V+ G R++ E+   ++T A  +D+ A K
Sbjct: 343 PLVVRLDGNAVEEGRRILQEANHPLVTLAATMDEGADK 380


>gi|257054562|ref|YP_003132394.1| succinyl-CoA synthetase subunit beta [Saccharomonospora viridis DSM
           43017]
 gi|256584434|gb|ACU95567.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Saccharomonospora viridis DSM 43017]
          Length = 389

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/394 (35%), Positives = 218/394 (55%), Gaps = 25/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G V+S    A  A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKELFAAHGVPVLPGTVVSEAEEARRAAEEIGGQV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +         R ILG  +        G     V V + ++I  E Y 
Sbjct: 57  -------GGVKLAADPDEAAEKARAILGLDI-------KGHVTRRVLVTEASEIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IE++A + P+ + K+ IDPL GV  +    +       
Sbjct: 103 SFLLDRANRTFLAMASAEGGMEIEQLAAERPEALAKVPIDPLTGVDLDKAREIVTKANFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    ++   L++ F  +D +L+E+NPL+      +  LD K++ DDNA +R     
Sbjct: 163 EVVREKAAEVIVKLWETFVSEDATLVEVNPLVRDPKDEIIALDGKVTLDDNAAFRQPKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           +L DV  ED  E +AK   L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 DLVDVEAEDPLEAKAKAKGLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI-- 353
           FLD+GGGA  + +AA  ++I  D  VK + +N+FGGI  CD +  GI+ A+K +  N   
Sbjct: 283 FLDIGGGASAEVMAAGLEVILGDPDVKSVFVNVFGGITACDAVANGIVEALKILGDNATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           PLV+RL+G NV+ G R++ E+   ++T +D  D+
Sbjct: 343 PLVVRLDGNNVEEGRRILTEAAHPLVTLVDTMDS 376


>gi|15806266|ref|NP_294971.1| succinyl-CoA synthetase subunit beta [Deinococcus radiodurans R1]
 gi|21264061|sp|Q9RUY3|SUCC_DEIRA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|6458989|gb|AAF10816.1|AE001972_6 succinyl-CoA synthetase, beta subunit [Deinococcus radiodurans R1]
          Length = 386

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/383 (36%), Positives = 209/383 (54%), Gaps = 24/383 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K +LR + V V  G V ++    ++  K    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKEVLRDFGVNVQDGKVATTPEEVQAIYKEYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
                  GGV+  ++    + + + ILG  +        G  VN V V    DI    E 
Sbjct: 57  -------GGVKYSANEDKALENAKNILGMDI-------KGLTVNKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI +  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSYTLMASAEGGMEIEEVAATNPEKIIRHRVDPVTGLRPYEAREVAIKAG 162

Query: 179 LQGQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            +G   +I   D+   + KA  ++D  L+EINPL +  +G    LD+K   DDNA+YRH 
Sbjct: 163 FRGNLNKI--ADMMVKMSKAALERDAVLVEINPLFVDADGTPIALDTKFEIDDNAMYRHK 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           D+   R++S E   E+EA  +  +Y+ LD GN+G + NGAG+ M T+D++   G  PANF
Sbjct: 221 DLAHYRELSAEHPLEVEASDYGFAYVKLDDGNVGVLGNGAGIVMTTLDVVNRAGAKPANF 280

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GGGA  D V  A K+++ D  VK I INIFGGI R D + KG++ A+ E  +  P+ 
Sbjct: 281 LDIGGGAKADVVYNAVKLVSKDPDVKAIFINIFGGITRADEVAKGVIRALDEGILTKPVR 340

Query: 357 MRLEGANVDIGNRLIAESGLNVI 379
           MR+ G   D    L+ E   ++I
Sbjct: 341 MRIAGTAEDEAKALLNEKNSDLI 363


>gi|145296561|ref|YP_001139382.1| succinyl-CoA synthetase subunit beta [Corynebacterium glutamicum R]
 gi|140846481|dbj|BAF55480.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 402

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 142/391 (36%), Positives = 227/391 (58%), Gaps = 26/391 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L   + VPV KG+V S+  AA  A + + G L VVK+Q+  GGRGK    
Sbjct: 5   VDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGG-LTVVKAQVKVGGRGKA--- 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  +          ILG  +        G  VN V V  GADI  E Y 
Sbjct: 61  -------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYF 106

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ +DPL G+  +    +      +
Sbjct: 107 SILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFE 166

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +++ + +++ +L+E+NPL++   G +  LD KI+ DDNA +RH +  
Sbjct: 167 TEVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTDGGDVIALDGKITLDDNADFRHDNRG 226

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PA 294
            L + +   D  E++AK+++L+Y+ LDG++G + NGAGL M+T+DI+    + +GG  PA
Sbjct: 227 ALAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNGAGLVMSTLDIVAAAGERHGGQRPA 286

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   +I  DS V+ + +N+FGGI  CDV+ KGI+ A+  +  +  
Sbjct: 287 NFLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFGGITACDVVAKGIVGALDVLGDQAT 346

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAID 383
            PLV+RL+G NV  G R++AE    ++T ++
Sbjct: 347 KPLVVRLDGNNVVEGRRILAEYNHPLVTVVE 377


>gi|255326666|ref|ZP_05367742.1| succinyl-CoA synthetase beta chain [Rothia mucilaginosa ATCC 25296]
 gi|255295883|gb|EET75224.1| succinyl-CoA synthetase beta chain [Rothia mucilaginosa ATCC 25296]
          Length = 388

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 144/398 (36%), Positives = 225/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV KG+V ++   A++A + + G L V+K+Q+  GGRGK    
Sbjct: 1   MDLFEYQARELFAKHGVPVLKGIVATTPEEAKAAAEEIGG-LTVIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S        + ILG  +        G  V+ V V DGADI  E Y 
Sbjct: 57  -------GGVKLAKSPDEAYEHAKAILGMDI-------KGHTVHRVLVADGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +     + S +GGM+IE++A + P+ + K+ +DPL+G+       +       
Sbjct: 103 SLLLDRANRSYLAMCSVEGGMEIEQLAAERPEALAKIEVDPLVGLDQAKAEEIAKAAGFS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +     +   L + +  +D +L+E+NPL++   G +  LD K+S DDNA +R  + +
Sbjct: 163 AELQEKVVPVLVKLGEVYTKEDATLVEVNPLVLTPEGTILALDGKVSLDDNAEFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D S E+  E +AKQ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDKSAENPLEAKAKQFDLNYVKLDGEVGIVGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA  +II  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 283 FLDIGGGASAEVMAAGLEIILGDEQVKSVFVNVFGGITACDAVADGIVKALEILGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NV  G R+++E+    V+ A  +D  A K
Sbjct: 343 PLVVRLDGNNVAEGRRILSEANHPLVVLAETMDSGADK 380


>gi|296130374|ref|YP_003637624.1| succinyl-CoA synthetase, beta subunit [Cellulomonas flavigena DSM
           20109]
 gi|296022189|gb|ADG75425.1| succinyl-CoA synthetase, beta subunit [Cellulomonas flavigena DSM
           20109]
          Length = 393

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/400 (35%), Positives = 225/400 (56%), Gaps = 35/400 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G+V ++   A +A + L    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGIVATTPEEARAAAEQLLPAEGGVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S         EILG  +        G  V+ V +  GA I +E
Sbjct: 61  ----------GGVKIARSADEAAERAGEILGMDI-------KGHTVHRVMIAAGARIAQE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASL 173
            Y SLL+DR       + S +GGM+IE++A + P+ + K+ +DP  G+      E VA+ 
Sbjct: 104 FYFSLLLDRAERRYLAMCSVEGGMEIEQLAVERPEALAKVAVDPRTGIDQAKADEIVAAA 163

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               E+ G+       +   L+  + D+D +L+E+NPL++ + G +  LD K++ D NA 
Sbjct: 164 GFAPEIAGEVAA----VLQKLWLVYRDEDATLVEVNPLVLTEEGDVVALDGKVTLDANAD 219

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA- 292
           +RH D   L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G A 
Sbjct: 220 FRHEDHAALEDKAAADPLEARAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAH 279

Query: 293 ----PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +AA   II ++  VK + +N+FGGI  CD +  GI++A++ 
Sbjct: 280 GGVKPANFLDIGGGASAEVMAAGLDIILTNPQVKSVFVNVFGGITACDAVANGIVAALEI 339

Query: 349 V--KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  + + PLV+RL+G NV  G R++A +G  ++T  D  D
Sbjct: 340 LGDEASKPLVVRLDGNNVVEGRRILAAAGHPLVTLADTMD 379


>gi|21223186|ref|NP_628965.1| succinyl-CoA synthetase subunit beta [Streptomyces coelicolor
           A3(2)]
 gi|256785715|ref|ZP_05524146.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
 gi|289769607|ref|ZP_06528985.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
 gi|21264055|sp|Q9KY56|SUCC1_STRCO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-1;
           AltName: Full=Succinyl-CoA synthetase subunit beta-1;
           Short=SCS-beta-1
 gi|8218209|emb|CAB92671.1| succinyl-CoA synthetase beta chain [Streptomyces coelicolor A3(2)]
 gi|289699806|gb|EFD67235.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
          Length = 394

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/402 (36%), Positives = 225/402 (55%), Gaps = 30/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAAREITERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ +S    ++   +ILG  +        G  V+ V + E   +I+ E Y
Sbjct: 57  -------GGVKLAASADEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GG++IEEVA   P+ + K  ID + GVT E    + +  + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGVEIEEVAATRPEAVAKTPIDAIDGVTPEKAREIVEAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+  F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH D 
Sbjct: 163 PAEVADKVADILVKLWDTFIKEDALLVEVNPLAKVVSGDVIALDGKVSLDDNAEFRHPDF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           + L D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 EALHDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV----- 349
           NFLD+GGGA    +A   +II  D  V+ + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVRSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K+  PLV+RL+G N ++G +++ ++   ++  +D +D AA K
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILTDANHPLVQRVDTMDGAADK 384


>gi|315426475|dbj|BAJ48108.1| succinyl-CoA synthetase beta subunit [Candidatus Caldiarchaeum
           subterraneum]
          Length = 374

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/376 (36%), Positives = 214/376 (56%), Gaps = 21/376 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++ + L R+Y +PV   VV+ S   A  A + L G   VVK+Q+   GRGK    
Sbjct: 2   MKLYEFEGRELFRRYGIPVNNYVVVRSAEEARRAAEALGGRT-VVKAQVLVAGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++  +    ++L S +        G RV  + V +  ++++ELYL
Sbjct: 58  -------GGVKVAENVEEAVMLAGKMLRSEI-------KGERVESLVVTEYTEVVKELYL 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       IAS +GG++IEE+A+  P  + K  ++PL+G+    V  +   ++L 
Sbjct: 104 GIIVDRFKRAPVVIASAEGGVEIEELARTSPGHVLKTEVNPLLGLADYQVRKIISFMKLD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY+ F + D  L EINPL+I  + RL  LDSKI  DDNAL+R     
Sbjct: 164 QKLAQQAAAILRGLYRLFVENDCELAEINPLVITPDNRLVALDSKIIVDDNALFRR---G 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E          E EA++   + + LDG+IG + NGAGL MATMD++KL GG+PANFLDVG
Sbjct: 221 EFSRPESGTGLEAEARRLGFAAVELDGDIGIIGNGAGLTMATMDMVKLKGGSPANFLDVG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V  A +++ +   VK + +NI GGI RCD + +G++SA K V     +V+R+ 
Sbjct: 281 GGASEDVVEKAARLLLTHPRVKVVFVNILGGITRCDEVARGLVSAYKSVGAGKKIVVRMM 340

Query: 361 GANVDIGNRLIAESGL 376
           G N + G R++ E+G+
Sbjct: 341 GTNEEEGKRILIENGI 356


>gi|315656423|ref|ZP_07909312.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492982|gb|EFU82584.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 386

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/392 (35%), Positives = 220/392 (56%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  G V S+V  A++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGVPVLPGKVASTVEEAKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   ++ + ILG  +        G  V  V V  G DI RE Y 
Sbjct: 58  -------GGVKLARSEEEAAANAQAILGMNI-------KGHTVYRVMVAAGTDIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+ +     + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALAKVPI-PASGMDTTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 SETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   +IT ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLITMMETMD 374


>gi|320334598|ref|YP_004171309.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           maricopensis DSM 21211]
 gi|319755887|gb|ADV67644.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           maricopensis DSM 21211]
          Length = 381

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 206/377 (54%), Gaps = 25/377 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAES--AIKTLPGPLYVVKSQIHAGGRGKGR 58
           M +HEYQ K LLR++ V V +G V    H  E   AI    G   VVK+Q+H GGRGK  
Sbjct: 1   MKLHEYQGKELLRRFGVNVQEGKV---AHTPEEVRAIAEEYGQPVVVKAQVHVGGRGKA- 56

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-- 116
                    GGV+   +    + + ++ILG  +        G  VN V V    DI    
Sbjct: 57  ---------GGVKFSPTADKAVENAQKILGMDI-------KGLTVNKVLVTKAVDIDAGV 100

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ ++VDR       +A  +GGM+IEE+A + P+ I +  +DP+ G+   +   +   
Sbjct: 101 EYYVGMIVDRNVQSFTLMACAEGGMEIEELAAERPEAIIRHRVDPVAGLRPFEAREIALK 160

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
              +G       D+   + KA  + D +L+EINPL +  +G    LD+K   DDNA+YRH
Sbjct: 161 AGFKGNLN-KIADMMVKMSKAALELDATLVEINPLFVDADGTPLALDTKFDMDDNAVYRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI   R++  E   E+EA ++  +Y+ LDGN+G + NGAG+ M ++D++   G  PANF
Sbjct: 220 KDIAAWRELEAEHPLEVEASEYGFAYVKLDGNVGVLGNGAGIVMTSLDVVNRAGAKPANF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GGGA  D V  A K+++ DS VK I +NIFGGI R D + KGI+ A++E  +  P+ 
Sbjct: 280 LDIGGGARADIVYNAVKLVSKDSDVKSIFVNIFGGITRADEVAKGIIQALQEGILTKPVR 339

Query: 357 MRLEGANVDIGNRLIAE 373
           MR+ G   +    L+A+
Sbjct: 340 MRVAGTAEEEAKALLAD 356


>gi|215426222|ref|ZP_03424141.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T92]
 gi|289749475|ref|ZP_06508853.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T92]
 gi|289690062|gb|EFD57491.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T92]
          Length = 387

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 225/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAK-AIATEIGRPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 163 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E +D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFKDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++ E+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADK 380


>gi|41406994|ref|NP_959830.1| succinyl-CoA synthetase subunit beta [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395345|gb|AAS03213.1| SucC [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 406

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ +VK+Q+  GGRGK    
Sbjct: 20  MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGRPV-MVKAQVKTGGRGKA--- 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 76  -------GGVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYI 121

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 122 SFLLDRANRTYLAMCSVEGGMEIEEVAATEPERLAKVPVDAVTGVDLATARSIAEKGHLP 181

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 182 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPDNQILALDGKVTLDANADFRQPGHA 241

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
              D    D  E++AK+H+L+Y+ LDG +G + NGAGLAM+T+D++    + +GG  PAN
Sbjct: 242 AFEDRDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAYAGEKHGGVKPAN 301

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 302 FLDIGGGASAEVMAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 361

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NVD G R++AE+    VI A  +D  A K
Sbjct: 362 PLVVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADK 399


>gi|118619789|ref|YP_908121.1| succinyl-CoA synthetase subunit beta [Mycobacterium ulcerans Agy99]
 gi|189081755|sp|A0PWD1|SUCC_MYCUA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118571899|gb|ABL06650.1| succinyl-CoA synthetase (beta chain) SucC [Mycobacterium ulcerans
           Agy99]
          Length = 387

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 219/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A  AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKGLFAKHNVPTTPGRVTDTAEGAR-AIATEIGHPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++          ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYEHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P ++ K+ +D   GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L+  F  +D +L+E+NPL+   + ++  LD K++ D NA +RH D  
Sbjct: 163 AEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK--EVKINI 353
           FLD+GGGA  + +AA   ++  DS VK + +N+FGGI  CD +  GI+ A++    + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++ ++   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADK 380


>gi|290971634|ref|XP_002668592.1| predicted protein [Naegleria gruberi]
 gi|284082062|gb|EFC35848.1| predicted protein [Naegleria gruberi]
          Length = 366

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 183/291 (62%), Gaps = 4/291 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-YVVKSQIHAGGRGKGRF 59
           +N+HEYQA+ L R Y++ V +G V++S    + A   L   + Y+VK+Q+ AGGRG+G+F
Sbjct: 30  LNLHEYQAQDLFRSYDISVPRGKVLTSATETKKACTELGNHVDYIVKAQVLAGGRGRGKF 89

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           K   +  KGGV+   S+      + ++LG  L+TKQTG  G   N VYV++     RELY
Sbjct: 90  K---SGLKGGVQKALSIGEAEDYVSKMLGQVLVTKQTGAEGKPCNKVYVQERLYARRELY 146

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++L+DR SG    I STQGGM IE+VA++ P++I  + I    G+       L   L  
Sbjct: 147 LAILLDRQSGGPVLIGSTQGGMAIEDVARESPEEIHTIPISVKEGLHKSQAEGLARKLGF 206

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +      D    LY  F   D  LLEINPLI   +G++   D+K++ DDNA +R  ++
Sbjct: 207 RDELLDQAVDQITKLYNLFMKTDSVLLEINPLIETADGKVICADAKVNIDDNAFFRQKEL 266

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
             L+D+++ED R++ A +++L+YI LDGNIGC+VNGAGLAMATMDIIKLYG
Sbjct: 267 FALKDITQEDPRDVRAAKYDLNYIGLDGNIGCIVNGAGLAMATMDIIKLYG 317


>gi|15608091|ref|NP_215466.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Rv]
 gi|15840375|ref|NP_335412.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           CDC1551]
 gi|148660730|ref|YP_001282253.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Ra]
 gi|148822160|ref|YP_001286914.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           F11]
 gi|167967813|ref|ZP_02550090.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Ra]
 gi|215402752|ref|ZP_03414933.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           02_1987]
 gi|215410539|ref|ZP_03419347.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429810|ref|ZP_03427729.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|215445097|ref|ZP_03431849.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T85]
 gi|218752616|ref|ZP_03531412.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis GM
           1503]
 gi|253800022|ref|YP_003033023.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 1435]
 gi|254231258|ref|ZP_04924585.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis C]
 gi|254363877|ref|ZP_04979923.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549931|ref|ZP_05140378.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260199972|ref|ZP_05767463.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T46]
 gi|289442367|ref|ZP_06432111.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T46]
 gi|289555268|ref|ZP_06444478.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 605]
 gi|289744682|ref|ZP_06504060.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           02_1987]
 gi|289753007|ref|ZP_06512385.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|289757036|ref|ZP_06516414.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T85]
 gi|289761086|ref|ZP_06520464.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis GM 1503]
 gi|294996436|ref|ZP_06802127.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           210]
 gi|297633473|ref|ZP_06951253.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730458|ref|ZP_06959576.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           KZN R506]
 gi|298524442|ref|ZP_07011851.1| succinyl-CoA synthetase, beta subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775081|ref|ZP_07413418.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu001]
 gi|306782005|ref|ZP_07420342.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu002]
 gi|306783630|ref|ZP_07421952.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu003]
 gi|306787994|ref|ZP_07426316.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu004]
 gi|306792331|ref|ZP_07430633.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu005]
 gi|306796730|ref|ZP_07435032.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu006]
 gi|306806797|ref|ZP_07443465.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu007]
 gi|306966995|ref|ZP_07479656.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu009]
 gi|306971188|ref|ZP_07483849.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu010]
 gi|307078915|ref|ZP_07488085.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu011]
 gi|307083473|ref|ZP_07492586.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu012]
 gi|313657786|ref|ZP_07814666.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           KZN V2475]
 gi|2829506|sp|P71559|SUCC_MYCTU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081754|sp|A5U0Z1|SUCC_MYCTA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1524211|emb|CAB01999.1| PROBABLE SUCCINYL-CoA SYNTHETASE (BETA CHAIN) SUCC (SCS-BETA)
           [Mycobacterium tuberculosis H37Rv]
 gi|13880542|gb|AAK45226.1| succinyl-CoA synthetase, beta subunit [Mycobacterium tuberculosis
           CDC1551]
 gi|124600317|gb|EAY59327.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis C]
 gi|134149391|gb|EBA41436.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504882|gb|ABQ72691.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Ra]
 gi|148720687|gb|ABR05312.1| succinyl-CoA synthetase beta subunit sucC [Mycobacterium
           tuberculosis F11]
 gi|253321525|gb|ACT26128.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 1435]
 gi|289415286|gb|EFD12526.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T46]
 gi|289439900|gb|EFD22393.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 605]
 gi|289685210|gb|EFD52698.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           02_1987]
 gi|289693594|gb|EFD61023.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|289708592|gb|EFD72608.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis GM 1503]
 gi|289712600|gb|EFD76612.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T85]
 gi|298494236|gb|EFI29530.1| succinyl-CoA synthetase, beta subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216428|gb|EFO75827.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu001]
 gi|308325242|gb|EFP14093.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu002]
 gi|308331628|gb|EFP20479.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu003]
 gi|308335439|gb|EFP24290.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu004]
 gi|308339245|gb|EFP28096.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu005]
 gi|308342889|gb|EFP31740.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu006]
 gi|308346807|gb|EFP35658.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu007]
 gi|308355385|gb|EFP44236.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu009]
 gi|308359324|gb|EFP48175.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu010]
 gi|308363231|gb|EFP52082.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu011]
 gi|308366888|gb|EFP55739.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu012]
 gi|323720662|gb|EGB29740.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis CDC1551A]
 gi|326904827|gb|EGE51760.1| succinyl-CoA synthetase subunit sucC [Mycobacterium tuberculosis
           W-148]
 gi|326904829|gb|EGE51762.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis W-148]
 gi|328459764|gb|AEB05187.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 4207]
          Length = 387

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 224/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAK-AIATEIGRPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 163 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++ E+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADK 380


>gi|183984520|ref|YP_001852811.1| succinyl-CoA synthetase (beta chain) SucC [Mycobacterium marinum M]
 gi|226734964|sp|B2HED1|SUCC_MYCMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|183177846|gb|ACC42956.1| succinyl-CoA synthetase (beta chain) SucC [Mycobacterium marinum M]
          Length = 387

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 219/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A  AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGAR-AIATEIGHPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++          ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYEHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P ++ K+ +D   GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L+  F  +D +L+E+NPL+   + ++  LD K++ D NA +RH D  
Sbjct: 163 AEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK--EVKINI 353
           FLD+GGGA  + +AA   ++  DS VK + +N+FGGI  CD +  GI+ A++    + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++ ++   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADK 380


>gi|317124200|ref|YP_004098312.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Intrasporangium
           calvum DSM 43043]
 gi|315588288|gb|ADU47585.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Intrasporangium
           calvum DSM 43043]
          Length = 396

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 216/386 (55%), Gaps = 30/386 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +   + VPV  G + ++   A +A + +    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGAIATTPEEARAAAERIGQSSGGVTVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V +S     +   +ILG  +        G  V+ V +  GA I  E
Sbjct: 61  ----------GGVKVATSADEAQAHAEQILGMDI-------KGHTVHRVMIAQGAKIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR +     + S +GGMDIE++A + P  + K+ +DP +G+       + D  
Sbjct: 104 YYFSILLDRANRSYLAMCSKEGGMDIEQLAVERPDALAKVAVDPNVGIDEAKAREIVDAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L++ + D+D +L+E+NPL+  ++G +  LD K+S D NA +RH 
Sbjct: 164 GFDPETAAKIVPVLGRLWEVYRDEDATLVEVNPLVKTEDGEIIALDGKVSLDANAGFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII--------KLY 289
           D + L D +  D  E EAK+ +L+Y+ L+G++G + NGAGL M+T+D++         + 
Sbjct: 224 DHEALEDKTAADPFEAEAKEKDLNYVRLEGSVGIIGNGAGLVMSTLDVVAYAGSEIDSVR 283

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           G  PANFLD+GGGA  + +A    II SD  VK + +N+FGGI  CD +  GI+ A+  +
Sbjct: 284 GPKPANFLDIGGGASAEVMANGLHIILSDPQVKSVFVNVFGGITSCDAVANGIVGALDAL 343

Query: 350 --KINIPLVMRLEGANVDIGNRLIAE 373
             + + PLV+RL+G NV+ G R++AE
Sbjct: 344 GTEEDRPLVVRLDGNNVEEGRRILAE 369


>gi|18313254|ref|NP_559921.1| succinyl-CoA synthetase subunit beta [Pyrobaculum aerophilum str.
           IM2]
 gi|21264039|sp|Q8ZVF3|SUCC_PYRAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|18160774|gb|AAL64103.1| succinyl-CoA synthetase beta subunit (sucC) [Pyrobaculum aerophilum
           str. IM2]
          Length = 382

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 221/401 (55%), Gaps = 31/401 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  KY V +  G V  +        + +  P+ V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFSKYGVKIPPGKVALTPEEVLKIAREIGAPV-VLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V +S +      + + G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKVANSPEEAYELSKRMFGMNI-------KGLIVKKLYVTKFVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
           SL++DR S    F+AS  GGMDIEE+AK  P+KI ++ +DP  G+    V S+   L   
Sbjct: 103 SLIIDRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYVDPATGLRDYHVRSIVSWLGFK 162

Query: 180 QGQARID-GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           QG ++      +   +Y+   D D  L+E NPL + K G +  LD+++  DDNAL++H  
Sbjct: 163 QGTSQWQQAASIVQAMYRIMVDYDAELVESNPLAVTKEGEVIPLDARVIVDDNALFKH-- 220

Query: 239 IQELRDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
             EL    EED R++      AK+    Y+ LDG++G + NGAGL MATMD++  +GG P
Sbjct: 221 -PELEKALEEDPRDVTEFEAYAKKIGFHYVELDGDVGIIGNGAGLTMATMDLVYHFGGRP 279

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KIN 352
           ANFLD+GGGA ++ V  A K++     VK I +NIFGGI R D +  GI  A+ E    N
Sbjct: 280 ANFLDIGGGASREVVKEAVKVLLHHPRVKVIFVNIFGGITRADEVALGIKEALAESGGTN 339

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
             +V+R++G N ++G  ++AE G+ +  +   ++AA+K V 
Sbjct: 340 KKIVVRMKGTNEELGRAILAEIGVPLFDS--AEEAAKKAVE 378


>gi|283457345|ref|YP_003361921.1| succinyl-CoA synthetase subunit beta [Rothia mucilaginosa DY-18]
 gi|283133336|dbj|BAI64101.1| succinyl-CoA synthetase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 428

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/398 (35%), Positives = 226/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L  K+ VPV KG+V ++   A++A + + G L V+K+Q+  GGRGK    
Sbjct: 41  VDLFEYQARELFAKHGVPVLKGIVATTPEEAKAAAEEIGG-LTVIKAQVKTGGRGKA--- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V V DGADI  E Y 
Sbjct: 97  -------GGVKLAKSPEEAYEHAKAILGMDI-------KGHTVHRVLVADGADIAEEYYF 142

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +     + S +GGM+IE++A + P+ + K+ +DPL+G+       +       
Sbjct: 143 SLLLDRANRSYLAMCSVEGGMEIEQLAAERPEALAKIEVDPLVGLDQAKAEEIAKAAGFS 202

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +     +   L + +  +D +L+E+NPL++   G +  LD K+S DDNA +R  + +
Sbjct: 203 AELQEKVVPVLVKLGEVYTKEDATLVEVNPLVLTPEGTILALDGKVSLDDNAEFRQPEHE 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D S E+  E +AKQ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 263 ALVDKSAENPLEAKAKQFDLNYVKLDGEVGIVGNGAGLVMSTLDVVAYAGENHGNVKPAN 322

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA  +II  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 323 FLDIGGGASAEVMAAGLEIILGDEQVKSVFVNVFGGITACDAVADGIVKALEILGDAATK 382

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NV  G R+++E+    V+ A  +D  A K
Sbjct: 383 PLVVRLDGNNVAEGRRILSEANHPLVVLAETMDSGADK 420


>gi|315427977|dbj|BAJ49567.1| succinyl-CoA synthetase beta subunit [Candidatus Caldiarchaeum
           subterraneum]
          Length = 374

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/376 (36%), Positives = 214/376 (56%), Gaps = 21/376 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++ + L R+Y +P+   VV+ S   A  A + L G   VVK+Q+   GRGK    
Sbjct: 2   MKLYEFEGRELFRRYGIPLNNYVVVRSAEEARRAAEALGGRT-VVKAQVLVAGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++  +    ++L S +        G RV  + V +  ++++ELYL
Sbjct: 58  -------GGVKVAENVEEAVMLAVKMLRSEI-------KGERVESLVVTEYTEVVKELYL 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       IAS +GG++IEE+A+  P  + K  ++PL+G+    V  +   ++L 
Sbjct: 104 GIIVDRFKRAPVVIASAEGGVEIEELARTSPGHVLKTEVNPLLGLADYQVRKIISFMKLD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY+ F + D  L EINPL+I  + RL  LDSKI  DDNAL+R     
Sbjct: 164 QKLAQQAAAILRGLYRLFVENDCELAEINPLVITPDNRLVALDSKIIVDDNALFRR---G 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E          E EA++   + + LDG+IG + NGAGL MATMD++KL GG+PANFLDVG
Sbjct: 221 EFSRPESGTGLEAEARRLGFAAVELDGDIGIIGNGAGLTMATMDMVKLKGGSPANFLDVG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V  A +++ +   VK + +NI GGI RCD + +G++SA K V     +V+R+ 
Sbjct: 281 GGASEDVVEKAARLLLTHPRVKVVFVNILGGITRCDEVARGLVSAYKSVGAGKKIVVRMM 340

Query: 361 GANVDIGNRLIAESGL 376
           G N + G R++ E+G+
Sbjct: 341 GTNEEEGKRILIENGI 356


>gi|308376558|ref|ZP_07439285.2| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu008]
 gi|308350724|gb|EFP39575.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu008]
          Length = 432

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 224/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 46  MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAK-AIATEIGRPVMVKAQVKIGGRGKA--- 101

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 102 -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 148 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 208 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 268 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 327

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 328 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 387

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++ E+   ++T +  +D+AA K
Sbjct: 388 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADK 425


>gi|221040116|dbj|BAH11821.1| unnamed protein product [Homo sapiens]
          Length = 379

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 185/324 (57%), Gaps = 3/324 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A+K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAVKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGI 324
           GG  + +V  AFK++T+D   + +
Sbjct: 335 GGVKEAQVYQAFKLLTADPKQQNL 358


>gi|94985192|ref|YP_604556.1| succinyl-CoA synthetase, beta subunit [Deinococcus geothermalis DSM
           11300]
 gi|189029905|sp|Q1IZE7|SUCC_DEIGD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94555473|gb|ABF45387.1| succinyl-CoA synthetase, beta subunit [Deinococcus geothermalis DSM
           11300]
          Length = 385

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/380 (37%), Positives = 203/380 (53%), Gaps = 31/380 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K LLR++ V V +G V  +        +    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKELLRRFGVNVQEGKVAYTPDEVRDIAREYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
                  GGV+   +      + + ILG  +        G  V  V V    DI    E 
Sbjct: 57  -------GGVKFSPTPDKAYENGQNILGMDI-------KGLTVKKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI K  +DP+ G+         +  E
Sbjct: 103 YVGMIVDRNVQSYTLMASAEGGMEIEEVAAATPEKIIKYRVDPITGLRP------FEARE 156

Query: 179 LQGQARIDG-----GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
           +  QA   G      D+   + +A    D  L+EINPL + ++G    LD+K   DDNA+
Sbjct: 157 VALQAGFKGNLNKIADMMVKMSEAALKMDAVLVEINPLFVDESGTPLALDTKFEIDDNAM 216

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           YRH D+ E R++  E   EIEA ++  +Y+ LDGN+G + NGAG+ M ++D++   G  P
Sbjct: 217 YRHKDLAEWRELEAEHPLEIEASKYGFAYVKLDGNVGVLGNGAGIVMTSLDVVNRAGAKP 276

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GGGA  D V  A K+++ D  VK I +NIFGGI R D + KGI+ A+ E  +  
Sbjct: 277 ANFLDIGGGARADIVYNAVKLVSKDPDVKSIFVNIFGGITRADEVAKGIIQALNEGILTK 336

Query: 354 PLVMRLEGANVDIGNRLIAE 373
           P+ MR+ G   +    L+AE
Sbjct: 337 PVRMRVAGTAEEEAKALLAE 356


>gi|84497953|ref|ZP_00996750.1| succinyl-CoA synthetase subunit beta [Janibacter sp. HTCC2649]
 gi|84381453|gb|EAP97336.1| succinyl-CoA synthetase subunit beta [Janibacter sp. HTCC2649]
          Length = 392

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/392 (36%), Positives = 221/392 (56%), Gaps = 32/392 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G V ++   A +A +T+    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDVFEKHGVPVLAGAVATTPEEARAAAETIGAKSGGVTVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  ++         ILG  +        G  V+ V +  GA I  E
Sbjct: 61  ----------GGVKVAKTVDEAQQHAEAILGMDI-------KGHTVHQVMIAQGAQIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DRT+     + S +GGMDIE++A + P+ + K+ +DP +G+   D A   +++
Sbjct: 104 YYFSVLLDRTNRTYLAMCSVEGGMDIEQLAVERPEALAKVAVDPNVGI---DTAKAQEIV 160

Query: 178 ELQGQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           +  G     G  + P    L+  + D+D +L+E+NPL+   +G +  LD K++ D+NA +
Sbjct: 161 DTAGFDAETGAKIVPVLEKLWLVYRDEDATLVEVNPLVKTTDGDIVALDGKVTLDENADF 220

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYG 290
           R  D   L D +  D  E  AK+ NL+Y+ LDGN+G + NGAGL M+T+D++    +  G
Sbjct: 221 RQPDHLALEDKAAADPLEAAAKEKNLNYVKLDGNVGIIGNGAGLVMSTLDVVAYAGESVG 280

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
             PANFLD+GGGA  + +A    II  D  VK + +N+FGGI  CD + +GI+ A+  + 
Sbjct: 281 SKPANFLDIGGGASAEVMANGLGIILGDEQVKAVFVNVFGGITACDEVARGIVGALDTLG 340

Query: 350 -KINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
                PLV+RL+G NVD G R++AE    ++T
Sbjct: 341 DAATKPLVVRLDGNNVDEGRRILAERNHPLVT 372


>gi|145591733|ref|YP_001153735.1| succinyl-CoA synthetase, beta subunit [Pyrobaculum arsenaticum DSM
           13514]
 gi|189081776|sp|A4WL16|SUCC_PYRAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145283501|gb|ABP51083.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 382

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 33/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  KY V +  G V ++        + + GP+ V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFSKYGVKIPPGRVATTPEEVRKIAEEIGGPV-VLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  + +       ++ G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKVAKTPEEAYELATKMFGMNI-------KGLVVKKIYVTKYVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +    F+AS  GG+DIEE+AK  P+KI ++ +DP +G+    V S+   L  +
Sbjct: 103 SLIIDRATRRYLFLASPIGGVDIEEIAKTQPEKIKRVYVDPSVGLRDYHVRSIVLWLGFK 162

Query: 181 G---QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               Q R     +   +Y    D D  L+E NPL + + G +  LD+++  DDNALY+H 
Sbjct: 163 PETPQWR-QASSIVQAMYNIMVDYDAELVESNPLAVTREGDVIPLDARVIVDDNALYKH- 220

Query: 238 DIQELRDVSEEDSR-----EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
              EL    EED R     E+ AK+    Y+ LDG++G + NGAGL MATMD++  +GG 
Sbjct: 221 --PELEKALEEDPRDVSEFEMYAKKIGFHYVELDGDVGIIGNGAGLTMATMDLVYHFGGR 278

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKI 351
           PANFLD+GGGA +D V  A K++     VK I +NIFGGI R D +  G+ +A+ +E   
Sbjct: 279 PANFLDIGGGASRDVVKEALKVLLRHPRVKVIFMNIFGGITRADEVAAGVEAALAEEGGT 338

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
              +V+R++G N ++G +++A+ G+ +    + ++AAQK V 
Sbjct: 339 KKKIVVRMKGTNEELGRQMLAKLGIPLYE--NAEEAAQKAVE 378


>gi|304390800|ref|ZP_07372752.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304325683|gb|EFL92929.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 386

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 219/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+  PV  G V S+V  A++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGAPVLPGKVASTVEEAKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   ++ + ILG  +        G  V  V V  G DI RE Y 
Sbjct: 58  -------GGVKLARSEEEAAANAQAILGMNI-------KGHTVYRVMVAAGTDIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+ +     + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALAKVPI-PASGMDTTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 SETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   ++T ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLVTMMETMD 374


>gi|239929389|ref|ZP_04686342.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291437715|ref|ZP_06577105.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291340610|gb|EFE67566.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
          Length = 393

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 223/397 (56%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREITERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + E   +I+ E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGMDIEEVA   P+ + K+ ID + GV       +    + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMDIEEVAATRPEAVAKIAIDAIDGVDKAKAQEIAAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L++ F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH + 
Sbjct: 163 PAEVADQVADVLVKLWEVFVKEDALLVEVNPLAKVASGDVLALDGKVSLDDNAEFRHPEF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           +EL+D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 EELQDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHKGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            ++ PLV+RL+G N ++G +++ ++   ++  +D  D
Sbjct: 343 EVDKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMD 379


>gi|332295922|ref|YP_004437845.1| succinyl-CoA synthetase, beta subunit [Thermodesulfobium narugense
           DSM 14796]
 gi|332179025|gb|AEE14714.1| succinyl-CoA synthetase, beta subunit [Thermodesulfobium narugense
           DSM 14796]
          Length = 365

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 151/397 (38%), Positives = 227/397 (57%), Gaps = 36/397 (9%)

Query: 1   MNIHEYQAKALLRKY-NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M + EYQAK++L +Y NVP  KGV+I      +  +  L  P  V+K+Q+  GGRGK   
Sbjct: 1   MRLFEYQAKSILSEYLNVP--KGVIIDK-ENVDQVVTKLNFPC-VLKAQVKVGGRGKA-- 54

Query: 60  KELPADSKGGV-RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                   GGV +V+ S  + + +  E L S  I       G +VN +  E+  DI REL
Sbjct: 55  --------GGVLKVKDS--NELKNALEKLFSMEIK------GEKVNRILAEELIDIDREL 98

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S++  R S     +   +GG+DIE++A+  P  I K+ +DP+IG+    + +L    E
Sbjct: 99  YFSVIFYRPSRRYMMVFCKEGGVDIEQLAEAKPDAINKVKVDPIIGIKDFMIRNLIKDFE 158

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L             + YK F +KD+ +LEINPL+I KN  +   D+K+ FDDNALY+H +
Sbjct: 159 LYNIL----NQFVKSAYKIFVEKDLVMLEINPLVITKNKEVICADAKVEFDDNALYKHPE 214

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            +   + SE     IEA++   S++ L+G+IG + NGAGL +AT+D +   GG  ANFLD
Sbjct: 215 FEAFLEQSE-----IEARKLGFSFVPLEGDIGILGNGAGLVLATIDSVTRAGGKCANFLD 269

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA  ++V +A K +     +KGILIN+FGGI R D + KG+L   +E K+N+P+V+R
Sbjct: 270 IGGGAKAERVKSALKFLVEQKKLKGILINVFGGITRADEVAKGLLEFEEEQKLNLPVVVR 329

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           L G   + G  ++ E    ++++  L D A+KIV  V
Sbjct: 330 LSGTKAEEGLEMLKER-FEIVSS--LRDGAKKIVELV 363


>gi|124027100|ref|YP_001012420.1| succinyl-CoA synthetase beta chain [Hyperthermus butylicus DSM
           5456]
 gi|123977794|gb|ABM80075.1| Succinyl-CoA synthetase beta chain [Hyperthermus butylicus DSM
           5456]
          Length = 377

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 138/395 (34%), Positives = 221/395 (55%), Gaps = 23/395 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M + E++AK +LRKY   V  GVVI+    A E  ++    P  +VKSQ+   GRGK   
Sbjct: 1   MKLFEFEAKEILRKYGADVPPGVVIARGEDAREKILEAGLEPPLMVKSQVLVAGRGKA-- 58

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+R  +S+   +  + E+        +T   G +   + VE   +   ELY
Sbjct: 59  --------GGIRRANSIDEAVRLVGELF-------ETPIKGLKPRYILVEKAVEHEAELY 103

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++ +DR+      + S  GGMDIEE+A++ P+ I ++ +DP++G+       L   + L
Sbjct: 104 TAITLDRSKRRPVVLVSRYGGMDIEEIAREKPESIIRMHVDPVLGLRGYHARKLGKAIGL 163

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A          +Y+ F D D  L+E NPL ++ + ++  LD++I  DDNALYRH ++
Sbjct: 164 SGRALTSFAAFLQAMYQVFVDYDAELVESNPLGLVGD-KVIPLDARIIVDDNALYRHQEL 222

Query: 240 -QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            +++ +  E    EI+A++  L+++ LDG+IG + NGAGL MATMD++  +GG PANFLD
Sbjct: 223 AKDIEETGEYSEWEIKARRQGLAFVELDGDIGIIGNGAGLTMATMDLVYEHGGRPANFLD 282

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVM 357
           +GGGA  + V  A   +      + I INIFGGI RCD + +G++ A+KE   +  P+V+
Sbjct: 283 IGGGASAEAVKRAVLFLFEYPKARKIFINIFGGITRCDEVARGVVEAIKEAGGLRKPIVI 342

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           RL G N + G R++ E G+      D  +A ++I+
Sbjct: 343 RLTGTNEEEGRRILREHGIEAFD--DPFEAVKRII 375


>gi|118466486|ref|YP_880328.1| succinyl-CoA synthetase subunit beta [Mycobacterium avium 104]
 gi|189081748|sp|A0QBP0|SUCC_MYCA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118167773|gb|ABK68670.1| succinyl-CoA synthetase beta chain [Mycobacterium avium 104]
          Length = 387

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 219/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGRPV-MVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVTGVDLATARSIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPDNQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
              D    D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 AFEDRDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NVD G R++AE+    VI A  +D  A K
Sbjct: 343 PLVVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADK 380


>gi|256370651|ref|YP_003108476.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           SMDSEM]
 gi|256009443|gb|ACU52803.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 392

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/399 (37%), Positives = 219/399 (54%), Gaps = 25/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVIS----SVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           M +HEYQAK +L+ + + V   ++ S    +V+AA+   K     + V+K+QI+AG    
Sbjct: 1   MKLHEYQAKKILKTFGIKVPYRIMASKMEETVYAAKKIFKKTKKYICVIKAQINAG---- 56

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL- 115
                      GG+++ +S+K V      I+G  L+T QT   G  V  V + +      
Sbjct: 57  ------GRGKGGGIKIANSIKDVYKKASNIIGKKLVTNQTNKKGKMVKKVIISEEVYTTG 110

Query: 116 --RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             +E YLS+  DR       I S +GG++IE   K          IDP IG+    +  +
Sbjct: 111 KNKEYYLSIFSDRNRYKNILIYSKEGGIEIESKKKSVFF----KKIDPYIGIQEFQIRKI 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               +++  A ++      N Y A+   D  LLEINPL+I K   +  +D+K   D+NA+
Sbjct: 167 AFHFKMKDSALMNLKLFIKNFYNAYISSDAYLLEINPLLITKKNEILAIDAKGILDENAI 226

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH+D + + D  + D RE+EAK+  L+++ LDG + CMVNGAGLAMATMD+IKL G  P
Sbjct: 227 FRHIDYKSM-DCEDLDYRELEAKKAGLNFLKLDGEVACMVNGAGLAMATMDMIKLTGANP 285

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-IN 352
           ANFLD+GG AD  ++     +I  D  VK ILINIFGGI+RCD++ +GIL   ++ K IN
Sbjct: 286 ANFLDLGGQADLKRIKKGLDLILKDKKVKLILINIFGGIVRCDIVAEGILKFFEKKKFIN 345

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            P+++RLEG NV           +N      L++AA KI
Sbjct: 346 FPIIIRLEGTNV--KLAKKKLKKINCFYVSSLEEAAMKI 382


>gi|315605037|ref|ZP_07880091.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313316|gb|EFU61379.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 395

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 222/384 (57%), Gaps = 27/384 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSV-HAAESAIKTLPG--PLYVVKSQIHAGGRGKG 57
           M+++EYQA+ + +++ VPV    + S+   A E A + L G   L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARQMFKEHGVPVLDYRLASTPDEAREGARELLEGGATLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  + +      +EILG  +        G  V  V +  GADI  E
Sbjct: 61  ----------GGVKLAHTAEEAGEKAQEILGLDI-------KGHVVTRVMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DPL+G+ ++    + D  
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPLVGIDADVARRIVDEA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                       +   L++ + D+D +L+E+NPL++  +G +  +D K++ DDNA +RH 
Sbjct: 164 GFDPATGEAIAPVLQTLWEVYRDEDATLVEVNPLVLSPDGSVWAVDGKVTLDDNARFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGG-A 292
           D   L DV+ +D RE  AK+  L+Y+ L+G +G + NGAGL M+T+D++ +    +GG  
Sbjct: 224 DHAGLVDVAAQDPREAAAKEAGLNYVRLEGEVGVIGNGAGLVMSTLDVVAMAGEEFGGLK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA  + +A   +II  D  V+ + +N+FGGI  CD + +GI+ A+  +   
Sbjct: 284 PANFLDIGGGASAEVMARGLEIILGDDQVRSVFVNVFGGITACDQVARGIIGALDALGET 343

Query: 351 INIPLVMRLEGANVDIGNRLIAES 374
              PLV+RL+G  V+ G  ++AE+
Sbjct: 344 ATKPLVVRLDGNRVEEGRAILAEA 367


>gi|290958040|ref|YP_003489222.1| succinyl-CoA synthetase subunit beta [Streptomyces scabiei 87.22]
 gi|260647566|emb|CBG70671.1| succinyl-CoA synthetase beta chain [Streptomyces scabiei 87.22]
          Length = 392

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 144/397 (36%), Positives = 225/397 (56%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + E   +I+ E Y
Sbjct: 57  -------GGVKLAATADEAVEHATNILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     IAS +GGM+IEEVA   P+ + K  ID   GVT E    + +    
Sbjct: 103 VSYLLDRTNRTFLSIASVEGGMEIEEVAATRPEAVAKTPIDANEGVTPEKAREIVEAANF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F ++D  L+E+NPL  + +G +  LD K+S D+NA +RH D 
Sbjct: 163 PAEVADKVVNVLVTLWKTFIEEDALLVEVNPLAKVASGDVIALDGKVSLDENADFRHPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
           +EL D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++      +GG  PA
Sbjct: 223 EELVDHAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLKDKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|170291005|ref|YP_001737821.1| succinyl-CoA synthetase, beta subunit [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175085|gb|ACB08138.1| succinyl-CoA synthetase, beta subunit [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 378

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 220/397 (55%), Gaps = 25/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY++K  L    +P+ KG++      A SA++ L G   V+K QI  G RGK    
Sbjct: 1   MRLLEYESKEALASKGIPIPKGILARDPEEAASAVEKLGG-RGVLKIQIPHGQRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S        +E+   T         G  V+ + VE+  D   E+Y+
Sbjct: 57  -------GGIKLVNSPNEAREVAKELFSRTFY-------GYEVSSLLVEEPVDTATEIYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + FI++  GGMD+EE+A  +P+ I K  + PL+G+ S    +L       
Sbjct: 103 GGIIDRNSRGMTFISTPYGGMDVEEIAASHPESIEKRTVHPLMGMRSHIARALAKNAAKN 162

Query: 181 GQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              +++    +  +L+    + D  +LEINPL + K+GRL  LD++I  DDNAL+RH++ 
Sbjct: 163 VPDKVNEIQRIISSLWDVAVEYDAVMLEINPLALTKDGRLVALDARIEVDDNALFRHMEF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E R  S E+ RE EA++ +++Y+ LDGNIG M NGAGLAMATMD++  +GG PANF DV
Sbjct: 223 -EKRYYSSENPRENEARKRDIAYVELDGNIGTMANGAGLAMATMDLVHTFGGKPANFCDV 281

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  D+VA A +II S+     +LIN   GI     +  G+ S  ++  + IP+V+R+
Sbjct: 282 GGGASADRVANALEIILSNPRASVVLINTLCGITSALDVALGVKSIKEKGLLKIPVVVRM 341

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D G R++ E G+        + A + + +AV+
Sbjct: 342 SGNQADEGKRILEEIGIKAT-----ESAEEAVRYAVE 373


>gi|297201853|ref|ZP_06919250.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
 gi|297147985|gb|EFH28820.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
          Length = 392

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 220/397 (55%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + E   +I+ E Y
Sbjct: 57  -------GGVKLAATADEAVEHATNILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGM+IEEVA+  P+ + K  ID  +GVT E    + +    
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMEIEEVAETRPEAVAKTPIDANVGVTPEVARQIVEAANF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F ++D  L+E+NPL  + +G +  LD K+S D+NA +R    
Sbjct: 163 PAEVADKVENVLVTLWKTFIEEDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           + L+D    +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 EALQDKDAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|333026621|ref|ZP_08454685.1| putative succinyl-CoA synthetase subunit beta [Streptomyces sp.
           Tu6071]
 gi|332746473|gb|EGJ76914.1| putative succinyl-CoA synthetase subunit beta [Streptomyces sp.
           Tu6071]
          Length = 391

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 222/396 (56%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-AVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI+ E Y+
Sbjct: 57  -------GGVKLASDPADAVEKAGQILGMDI-------KGHTVHKVMLAQTADIVEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGM+IEEVA   P+ + K+ +D   GVT E    + D  +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGMEIEEVAATKPEALAKIAVDANEGVTPEKAREIVDAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    +    L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  + +
Sbjct: 163 EDVKDGIAEALQKLWTVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENADFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEN 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++ PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 VSKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 378


>gi|111220617|ref|YP_711411.1| succinyl-CoA synthetase subunit beta [Frankia alni ACN14a]
 gi|111148149|emb|CAJ59818.1| succinyl-CoA synthetase, beta subunit [Frankia alni ACN14a]
          Length = 405

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/392 (37%), Positives = 217/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQAK L  ++ VPV  G   ++   A  AI T  G   VVK+Q+ AGG       
Sbjct: 18  VDLFEYQAKKLFAEHGVPVPTGKTATTPEEAR-AIATELGGKVVVKAQVKAGG------- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V        +    ILG  +        G  V+ V VE+ ++I  E Y 
Sbjct: 70  ---RGKAGGVKVADGPDDAFAKATAILGMDI-------KGHTVHSVLVEEASNIAEEYYA 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P  + ++ IDPL GV +     +    +L 
Sbjct: 120 SFLLDRANRTFLAMASREGGMEIEEVAATNPDALARIAIDPLTGVDAAKAREIAVAAKLP 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     +L   L+  F   D +L+E+NPLI+  +GR+  LD K+S D+NA +RH + +
Sbjct: 180 ETALDGAAELLAKLWTVFVKSDATLVEVNPLILTADGRVVALDGKVSLDENADFRHPENE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
              DVS  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 240 AFVDVSAVDPLEQKAKEKGLNYVKLEGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPAN 299

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIP 354
           FLD+GGGA  + +A    II  D SVK + +NIFGGI  CD +  GI+ A+K V  +  P
Sbjct: 300 FLDIGGGASAEVMANGLSIILGDPSVKSVFVNIFGGITACDAVANGIVQALKIVGDVTTP 359

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G N + G R++ E+ L+V+  +D  D
Sbjct: 360 LVVRLDGNNAEEGRRILKEANLSVVKPVDTMD 391


>gi|41033569|emb|CAF18451.1| succinyl-CoA synthetase beta subunit [Thermoproteus tenax]
          Length = 387

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 224/398 (56%), Gaps = 25/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+AK +  KY V +  G +  S        + +  P+ V+K+Q+   GRGK    
Sbjct: 6   MKLYEYEAKEIFAKYGVKIPPGKLALSPQEVRKIAEEIGKPV-VLKAQVTVAGRGKA--- 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  S +      +++ G  +        G  V  +YV +  ++ RE+YL
Sbjct: 62  -------GGIKVAKSPQEAEELAKQMFGMNI-------KGLTVRKIYVTEYVEVEREMYL 107

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR S    F+AS  GG+DIEE+AK  P+KI ++ +DP  G+    +  +   L ++
Sbjct: 108 SLIIDRASRRYLFLASPIGGVDIEEIAKREPEKIKRVYVDPFEGLKDFHIRGIVSWLGVK 167

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              Q       +   +YKA  + +  L+E NPL + K+G +  LD++I  DDNALY+H D
Sbjct: 168 AGTQQWEQAAGIVKAMYKAMTELEAELVESNPLAVTKSGDVIPLDARIIIDDNALYKHPD 227

Query: 239 IQELRDVSEEDSREIE--AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++  +    D  E E  A++   +Y+ LDG+IG + NGAGL M+TMD++  YGG PANF
Sbjct: 228 LEKAYEEDPRDVTEFERYAQRIGFNYVELDGDIGIIGNGAGLTMSTMDLVYHYGGRPANF 287

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPL 355
           LD+GGGA ++ V  A K++     VK I INIFGGI R D +  G+  A+ E+      +
Sbjct: 288 LDIGGGASREVVKEALKVLLRHPRVKVIFINIFGGITRADEVAAGVEGALNELGNAGKKI 347

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           ++R++G N ++G +++A+ G+ +  +   ++AAQK V 
Sbjct: 348 IVRMKGTNEELGRQMLAKIGVPLYES--AEEAAQKAVE 383


>gi|254773954|ref|ZP_05215470.1| succinyl-CoA synthetase subunit beta [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 387

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/398 (34%), Positives = 219/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGLPV-MVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVTGVDLATARSIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
              D    D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 AFEDRDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NVD G R++AE+    VI A  +D  A K
Sbjct: 343 PLVVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADK 380


>gi|289596661|ref|YP_003483357.1| succinyl-CoA synthetase, beta subunit [Aciduliprofundum boonei
           T469]
 gi|289534448|gb|ADD08795.1| succinyl-CoA synthetase, beta subunit [Aciduliprofundum boonei
           T469]
          Length = 368

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 220/397 (55%), Gaps = 31/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EYQ KAL RK+ VP  +G V          IK   G   V+K+Q+  GGRGK    
Sbjct: 1   MNLYEYQGKALFRKFGVPTPEGYVAFK----PEDIKEFEGE-RVIKAQVLTGGRGKS--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  SSL+      R+IL   +        G +V+ V VE+   I +E Y+
Sbjct: 53  -------GGVKFASSLEEARELARQILAMEI-------KGHKVHAVLVEEKLKIEKEFYV 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     +AS +GG++IE V     +KI+K +++P IGV       L   +   
Sbjct: 99  SILIDRSTRSPLIMASPEGGVEIESVPD---EKIYKFVVNPEIGVQPFVGRLLSKKMGFT 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F + D  L+EINPL+ +  G+L   DSK+  D ++LYRH D++
Sbjct: 156 GDLAKQFTKILMNLYHMFREYDAELVEINPLV-LSEGKLIAADSKVVIDTDSLYRHKDLE 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  +  E+   E+EA +   +++ LDGN+G + NGAGL MAT+D + LYG  P NFLD+G
Sbjct: 215 E--NAEEKTPLELEANKAGYAFVELDGNVGVIANGAGLTMATLDTLLLYGLKPRNFLDLG 272

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    D    AF  +   ++   IL+NIFGG+ +CD + +GI++A     IN+P+V+RL 
Sbjct: 273 GTDSVDITKNAFTYVLK-ANPDAILVNIFGGVTKCDTVAQGIIAAKDAFNINLPIVVRLS 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G + + G +++ E G++     D+  A +K+   ++G
Sbjct: 332 GVHEEEGRKMLEEKGIHAFA--DMRHAIEKLKSIMEG 366


>gi|260907284|ref|ZP_05915606.1| succinyl-CoA synthetase subunit beta [Brevibacterium linens BL2]
          Length = 389

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 222/393 (56%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV K  V ++  AA+ A + L G + VVKSQ+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEKHGVPVLKAQVATTPEAAKKAAEDLGGGVVVVKSQVKMGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + +   +  ++ILG  +        G     V + +GADI  E Y 
Sbjct: 58  -------GGVKVAKNPEEAEARAKDILGLDI-------KGHITEKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     + S +GG++IE++A++ P+ + K+ +  + G+ +     +       
Sbjct: 104 SVLLDRSNRTYLAMCSKEGGVEIEQLAEERPEALAKIPVSAIDGIDAAKAEEIAKEAGFD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +  +L+  F  +D SL+E+NPL+    G +  LD K+S D+NA +R  + +
Sbjct: 164 ADTAAKVAPVLMSLWTVFEKEDASLVEVNPLVKTGAGDIIALDGKVSLDENADFRQPEHE 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           ELRD S E+  E++AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 224 ELRDDSAENPLELKAKKLDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHSNVKPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A   ++I  D  VK + +N+FGGI  CD +  GI+ A++ +  +   
Sbjct: 284 FLDIGGGASAEVMANGLEVILGDEQVKSVFVNVFGGITACDAVADGIVKALEILGDQATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G  ++ E+   ++T  D  D
Sbjct: 344 PLVVRLDGNNVEEGRAILKEAANPLVTLTDTMD 376


>gi|163839116|ref|YP_001623521.1| succinyl-CoA synthetase subunit beta [Renibacterium salmoninarum
           ATCC 33209]
 gi|189081779|sp|A9WKU9|SUCC_RENSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|162952592|gb|ABY22107.1| succinyl-CoA synthetase beta chain [Renibacterium salmoninarum ATCC
           33209]
          Length = 389

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/408 (34%), Positives = 229/408 (56%), Gaps = 31/408 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V ++   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVANTAEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +          ILG  +        G  V+ V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEAFEYAGNILGMDI-------KGHTVHKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG++IE +A + P+ + ++ +DP +G+       + D     
Sbjct: 103 SVLLDRANRNYLAMCSVEGGVEIEVLAVERPEALARIAVDPAVGIDQAKAEEIVDAAGFA 162

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
               +DG  +    L+  F  +D +L+E+NPL+   +GR+  LD K++ D NA +RH D 
Sbjct: 163 ADV-LDGVIETIKKLWDVFQKEDATLVEVNPLVKTGDGRILALDGKVTLDANADFRHPDH 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           + L D    D  E +AK+++L+Y+ LDG +G + NGAGL M+T+D++   G +     PA
Sbjct: 222 EALEDKDSADPLEAKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGESHGNVKPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK--EVKIN 352
           NFLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A++      N
Sbjct: 282 NFLDIGGGASAEVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVKALEILGTSAN 341

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK---IVHAVK 396
            PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K   + HA K
Sbjct: 342 KPLVVRLDGNNVEEGRRILTEANHPLVTQAATMDEGADKAAELAHAAK 389


>gi|295838515|ref|ZP_06825448.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. SPB74]
 gi|295827036|gb|EFG65201.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. SPB74]
          Length = 391

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 218/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-AVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPADAVEKAGQILGMDI-------KGHTVHKVMLAQTADIAEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGM+IEEVA   P+ + K+ +D   GVT E    + D     
Sbjct: 103 SFLLDRTNRTFLAMASVEGGMEIEEVAATKPEALAKIAVDANEGVTPEKAREIVDAANFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    +    L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  + +
Sbjct: 163 ADVKDGIAEALQKLWTVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENADFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEN 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++ PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 VSKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 378


>gi|256783949|ref|ZP_05522380.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
 gi|289767831|ref|ZP_06527209.1| succinyl-coa synthetase subunit beta [Streptomyces lividans TK24]
 gi|289698030|gb|EFD65459.1| succinyl-coa synthetase subunit beta [Streptomyces lividans TK24]
          Length = 383

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 199/371 (53%), Gaps = 23/371 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L +++ + V +  V  S   A    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFKEHGIVVPRAEVTDSPERAREVARALGG-RAVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +         R ILG  +        G  V  V + +  DI RE Y+
Sbjct: 57  -------GGVRLAADPAEAEEAARRILGMDI-------RGHTVGTVMLAEPCDIEREFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR SG    IAS +GG +IEEVA   P+ + ++ +DP  GV +     + D   L 
Sbjct: 103 SYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q      D    L+K    +D  L+E+NPL+    GR+  LD K++ DDNA +R     
Sbjct: 163 PQTV----DTLVRLWKVLVREDALLVEVNPLVRTAEGRIVALDGKVTLDDNARFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E R   + DS E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 ETRQ-EDADSLEARAGAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    ++ SD  V+ +L+N+FGGI  CD +  GI+ A+ EV++  PLV+RL+
Sbjct: 278 GGASARVMADGLSVVLSDPDVRSVLVNVFGGITACDAVADGIVRALDEVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLI 371
           G N   G  L+
Sbjct: 338 GNNAARGRALL 348


>gi|88855831|ref|ZP_01130494.1| succinyl-CoA synthetase subunit beta [marine actinobacterium
           PHSC20C1]
 gi|88815155|gb|EAR25014.1| succinyl-CoA synthetase subunit beta [marine actinobacterium
           PHSC20C1]
          Length = 389

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 222/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   Y VPV  G++  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDVFESYGVPVLAGLIADTPEEAKAAAEKIGGTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +     +   +ILG  +        G  V  V +  GA I +E Y 
Sbjct: 57  -------GGVKVVHNADDAFAAAEQILGLDI-------NGHTVKRVMIAAGARIAQEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG++IE +A + P+ + K+ I+PL G+       +    +  
Sbjct: 103 SVLLDRANRSYLSLCSVEGGVEIEVLAVERPEALAKIEINPLTGIDLAKATEIAIAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  LY  +  +D +L+E+NPL+I ++G +  LD K+S D+NA +RH    
Sbjct: 163 AELVDKVAPVFVKLYDVYKGEDATLVEVNPLVITEDGDIVALDGKVSLDENAEFRHPKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E +AK + L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 SLEDAAAANPLEAKAKANGLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD + KGI+ A+ E+    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDPQVKSVFVNVFGGITACDAVAKGIVGALAELGSAANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           PLV+RL+G  V+ G  ++AE+   ++T A  +D+ A K
Sbjct: 343 PLVVRLDGNKVEEGRAILAEANHPLVTLAASMDEGADK 380


>gi|302519548|ref|ZP_07271890.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SPB78]
 gi|318058780|ref|ZP_07977503.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SA3_actG]
 gi|318078965|ref|ZP_07986297.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SA3_actF]
 gi|302428443|gb|EFL00259.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SPB78]
          Length = 391

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 221/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-AVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPADAVKKAGQILGMDI-------KGHTVHKVMLAQTADIAEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGM+IEEVA   P+ + K+ +D   GVT E    + D  +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGMEIEEVAATKPEALAKIAVDANEGVTPEKAREIVDAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    +    L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  + +
Sbjct: 163 EDVKDGIAEALQKLWTVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENADFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEN 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++ PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 VSKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 378


>gi|118469786|ref|YP_889762.1| succinyl-CoA synthetase subunit beta [Mycobacterium smegmatis str.
           MC2 155]
 gi|189081751|sp|A0R3M4|SUCC_MYCS2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118171073|gb|ABK71969.1| succinyl-CoA synthetase, beta subunit [Mycobacterium smegmatis str.
           MC2 155]
          Length = 387

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 222/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP + G V  S   A++  + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTSPGRVTDSAEDAKTIAEEIGRPV-MVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAFTHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D+NA +R     
Sbjct: 163 AEVLDAAAVTIQKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDENAGFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFEDRDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I  DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVQALQILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NV+ G R++AE+    VI A  +D  A K
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVIQAETMDAGADK 380


>gi|284030088|ref|YP_003380019.1| succinyl-CoA synthetase subunit beta [Kribbella flavida DSM 17836]
 gi|283809381|gb|ADB31220.1| succinyl-CoA synthetase, beta subunit [Kribbella flavida DSM 17836]
          Length = 384

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/393 (38%), Positives = 219/393 (55%), Gaps = 29/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G VI +   A +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLLEYQAKELFARHGVPVTLGRVIENAADAAAAAEALGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +         R+ILG  +        G  V  V +   A I  E YL
Sbjct: 57  -------GGVKLAADPAEATERARDILGMDI-------KGHTVRRVLLAPAAAIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +     IAST+GG++IEEVA   P  I K+ IDP +GV     A +     L 
Sbjct: 103 SFLVDRANRDYLCIASTEGGVEIEEVAHSNPDAIAKVSIDPAVGVDDAKAAEIVAAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     D+   L+  F  +D SL+E+NPL+ + +G L  LD K++ D+NA YRH D  
Sbjct: 163 AGAV----DVVRRLWAVFVAEDASLVEVNPLVKLADGSLEALDGKVTLDENAAYRHPDHA 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
              D +  D  E  A+   L+Y+ LDG++G + NGAGL M+T+D++   G A     PAN
Sbjct: 219 AFEDKAAADPLEAAAQAKGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 278

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    II  D+ VK + +N+FGGI  CD +  GI+ A++++  + N 
Sbjct: 279 FLDIGGGASAEVMANGLGIILGDTQVKSVFVNVFGGITACDAVSNGIVQALEQLGKQANK 338

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NVD G ++++ +   ++T +D  D
Sbjct: 339 PLVVRLDGNNVDEGRKILSRANHPLVTVVDTMD 371


>gi|119872536|ref|YP_930543.1| succinyl-CoA synthetase subunit beta [Pyrobaculum islandicum DSM
           4184]
 gi|189081778|sp|A1RTB8|SUCC_PYRIL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119673944|gb|ABL88200.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pyrobaculum
           islandicum DSM 4184]
          Length = 382

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/401 (34%), Positives = 223/401 (55%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  +Y V +  G +  +        + +  P+ V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFLRYGVKIPPGKLALTPDEVRKIAEEIGTPV-VLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  + +      +++ G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKIAQTPEEAYELSKKMFGMNI-------KGLVVRKLYVTKYVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR S    F+AS  GG+DIEE+AK  P+KI K+ +DP IG+    + S+   L  +
Sbjct: 103 SLIIDRASRRYLFLASPIGGVDIEEIAKTSPEKIKKVYVDPSIGLRDYHIRSIISWLGFK 162

Query: 181 --GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              Q       +   +Y+   D D  L+E NPL + K G +  LD+++  DDNAL++H D
Sbjct: 163 PGSQQWQQTASVIQAMYRIMVDYDAELVETNPLALSKEGEVIPLDARVIVDDNALFKHPD 222

Query: 239 IQELRDVSEEDSREIEA--KQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++  +    D  E EA  K+    Y+ LDG+IG + NGAGL MATMD++  +GG PANF
Sbjct: 223 LEKALEEDPRDITEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI-PL 355
           LD+GGGA ++ V  A K++ +   VK I +NIFGGI R D +  GI  A+ EVK +   +
Sbjct: 283 LDIGGGASREVVKEAVKVLLNHPRVKVIFVNIFGGITRADEVALGIKDALAEVKEHTKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+R++G N + G  +++E G+ +    + ++AA+K V   K
Sbjct: 343 VVRIKGTNEEQGKAILSEIGIPLFE--NAEEAAKKAVELAK 381


>gi|254823468|ref|ZP_05228469.1| succinyl-CoA synthetase subunit beta [Mycobacterium intracellulare
           ATCC 13950]
          Length = 387

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 219/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A   I T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARE-IATEIGRPVMVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++        + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYEHAKNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLATARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+     ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTINKLWEVFVAEDATLVEVNPLVRDPKDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           E  D    D  E++AK+H+L+Y+ LDG++G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 EFEDRDATDPLELKAKEHDLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NVD G R++A++    VI A  +D  A K
Sbjct: 343 PLVVRLDGNNVDEGRRILAQANHPLVIQAETMDAGADK 380


>gi|227494730|ref|ZP_03925046.1| succinyl-CoA synthetase beta chain [Actinomyces coleocanis DSM
           15436]
 gi|226831730|gb|EEH64113.1| succinyl-CoA synthetase beta chain [Actinomyces coleocanis DSM
           15436]
          Length = 387

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/395 (37%), Positives = 229/395 (57%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   Y VPV KGVV ++   AE+A+  L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEAYAVPVLKGVVATTPAEAEAAVVELGTPVVVVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG  +        G  VN V V  GA I  E Y 
Sbjct: 58  -------GGVKLAKSPAEAAEKASEILGMDI-------KGHTVNKVMVAQGASIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGMDIE +AK+ P+ + K+ +D  +G+ +E+VA+   +L   
Sbjct: 104 SILLDRANRSHLAMCSKEGGMDIETLAKERPEALAKVHLDATVGI-NEEVAT--QILTAA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   L P    L++ +  +D +L+E+NPL+ + +G +  LD K+S DDNA +RH 
Sbjct: 161 GFTADEQPALVPVLVKLWEVYAKEDATLVEVNPLVKVASGEIIALDGKVSLDDNAAFRHP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAP 293
              EL+D+S ED  E +AK   L+Y+ L+G +G + NGAGL M+T+D++      YG  P
Sbjct: 221 QHAELKDISAEDPLESKAKAAGLNYVRLEGEVGIIGNGAGLVMSTLDVVAYAGEKYGVHP 280

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GGGA  + +A   +II  D  V+  L+N+FGGI  CD +  G++ A++ +  N 
Sbjct: 281 ANFLDIGGGASAEVMAKGLEIILGDEQVRSCLVNVFGGITACDQVAAGVIGALELLGDNA 340

Query: 354 --PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
             P+V+RL+G  V+ G +++ E+   ++T ++  D
Sbjct: 341 TKPIVVRLDGNKVEEGRQILMEANHPLVTMVETMD 375


>gi|25029006|ref|NP_739060.1| succinyl-CoA synthetase subunit beta [Corynebacterium efficiens
           YS-314]
 gi|23494293|dbj|BAC19260.1| putative succinyl-CoA synthetase beta subunit [Corynebacterium
           efficiens YS-314]
          Length = 425

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 224/393 (56%), Gaps = 32/393 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   + VPV +G+V  +   A  A + L GP  VVK+Q+  GGRGK    
Sbjct: 27  MDLFEYQARDLFEAHGVPVVRGIVADTPEDARRAAEELGGPT-VVKAQVKVGGRGKA--- 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+    +      +E  G+ L     G T   V  V V +  DI  E Y 
Sbjct: 83  -------GGVRLAGDPQKA----QEAAGAILSMDIKGHT---VEQVMVVEAVDIAEEYYF 128

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
           S+L+DR +     + S +GGM+IE +A++ P+ + ++ ++PL G+    + ++A      
Sbjct: 129 SILLDRANRSYLAMCSMEGGMEIEVLARERPEALARVEVNPLTGIDDTKAREIARAAGFD 188

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +   Q  +    +   LY+ + D+D +L+E+NPL++   G +  LD KI+ DDNA +RH 
Sbjct: 189 DTIAQKIVP---VLQQLYRVYHDEDATLVEVNPLVLTAEGEVLALDGKITLDDNADFRHD 245

Query: 238 DIQEL-RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGG- 291
           + +EL       D  E+ AK++ L+Y+ LDG +G + NGAGL M+T+DI+    + +GG 
Sbjct: 246 NREELVGSAGTTDPLELRAKKNGLNYVRLDGTVGIIGNGAGLVMSTLDIVAEAGQRHGGQ 305

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           APANFLD+GGGA  D + A  ++I  D  V+ +L+N+FGGI  CD + +GI+ A++E+  
Sbjct: 306 APANFLDIGGGASSDSMVAGLEVIMCDPQVRSVLVNVFGGITACDEVARGIVGALEELGD 365

Query: 352 NI--PLVMRLEGANVDIGNRLIAESGLNVITAI 382
               P+V+RL+G NVD G  ++ E    ++T +
Sbjct: 366 GAAKPIVVRLDGHNVDKGREILEEFNHPLVTLV 398


>gi|259506005|ref|ZP_05748907.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259166486|gb|EEW51040.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           efficiens YS-314]
          Length = 399

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 224/393 (56%), Gaps = 32/393 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   + VPV +G+V  +   A  A + L GP  VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEAHGVPVVRGIVADTPEDARRAAEELGGPT-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+    +      +E  G+ L     G T   V  V V +  DI  E Y 
Sbjct: 57  -------GGVRLAGDPQKA----QEAAGAILSMDIKGHT---VEQVMVVEAVDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
           S+L+DR +     + S +GGM+IE +A++ P+ + ++ ++PL G+    + ++A      
Sbjct: 103 SILLDRANRSYLAMCSMEGGMEIEVLARERPEALARVEVNPLTGIDDTKAREIARAAGFD 162

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +   Q  +    +   LY+ + D+D +L+E+NPL++   G +  LD KI+ DDNA +RH 
Sbjct: 163 DTIAQKIVP---VLQQLYRVYHDEDATLVEVNPLVLTAEGEVLALDGKITLDDNADFRHD 219

Query: 238 DIQEL-RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGG- 291
           + +EL       D  E+ AK++ L+Y+ LDG +G + NGAGL M+T+DI+    + +GG 
Sbjct: 220 NREELVGSAGTTDPLELRAKKNGLNYVRLDGTVGIIGNGAGLVMSTLDIVAEAGQRHGGQ 279

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           APANFLD+GGGA  D + A  ++I  D  V+ +L+N+FGGI  CD + +GI+ A++E+  
Sbjct: 280 APANFLDIGGGASSDSMVAGLEVIMCDPQVRSVLVNVFGGITACDEVARGIVGALEELGD 339

Query: 352 NI--PLVMRLEGANVDIGNRLIAESGLNVITAI 382
               P+V+RL+G NVD G  ++ E    ++T +
Sbjct: 340 GAAKPIVVRLDGHNVDKGREILEEFNHPLVTLV 372


>gi|159121964|gb|EDP47087.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus A1163]
          Length = 394

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/352 (37%), Positives = 205/352 (58%), Gaps = 12/352 (3%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+KSQI AGGRGKG+   + +D KGG+R+ ++ +    +   +LG  L T+QT P G  V
Sbjct: 47  VLKSQILAGGRGKGK---MSSDGKGGIRIVATPEQAFQNASRMLGHYLATQQTPPHGLLV 103

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             +Y+    D+ +E YL+L  DR       + S QGG++IE        K+ +   +   
Sbjct: 104 KKLYIYKAVDVEQEFYLALTFDRERYSPVILISDQGGVNIE----SNQDKLHRFWFNLSR 159

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+T E +A +        +       +   + K F ++D  LLE+NPL+    G    LD
Sbjct: 160 GITGETMAGIQKQSCFTDKEMPTIESIIRQMIKLFEERDAILLELNPLVRTPEGSFVCLD 219

Query: 224 SKISFDDNALYRHLDI--QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
           +K  FD+ A +R  ++  +E R    ED  E EA+ H L YI L+G+IG +VNGAGLAMA
Sbjct: 220 AKFEFDNAAQFRQPEVFSKEERMPGFED--EYEAQMHGLVYIRLNGHIGNIVNGAGLAMA 277

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           T D+I L+GG  ANFLD+GG A  + +  AF+I++ D  V+GI +NIFGGI+RCD++ + 
Sbjct: 278 TNDLINLHGGKCANFLDIGGKATTETLLKAFEILSRDQQVRGIFVNIFGGIVRCDMIAES 337

Query: 342 ILSAVKEV-KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           I+ A   +    +P+V+RL+G N D   + ++ S L++ T  DL+ AA++I+
Sbjct: 338 IIQAAHTLGGFRVPVVVRLQGTNCDAAMKRLSTSELDISTETDLEKAAKRII 389


>gi|226307916|ref|YP_002767876.1| succinyl-CoA synthetase beta subunit [Rhodococcus erythropolis PR4]
 gi|259511789|sp|C1A3F2|SUCC_RHOE4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226187033|dbj|BAH35137.1| succinyl-CoA synthetase beta subunit [Rhodococcus erythropolis PR4]
          Length = 389

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 230/407 (56%), Gaps = 29/407 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTSAGRVTDTVAGAREIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+    + + +++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSPDVDAAVANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F ++D  L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFINEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 AFEDRDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK---IVHAVK 396
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K   + HA K
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVATMDEAADKAAELAHAAK 389


>gi|120405820|ref|YP_955649.1| succinyl-CoA synthetase subunit beta [Mycobacterium vanbaalenii
           PYR-1]
 gi|189081756|sp|A1TEP3|SUCC_MYCVP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119958638|gb|ABM15643.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           vanbaalenii PYR-1]
          Length = 387

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/398 (34%), Positives = 225/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  S   A++  + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTESAEDAKAIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +  ++  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPEDALTHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV       + +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTIAKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 EFEDKDATDPLELKAKENDLNYVKLDGAVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDSQVKSVFVNVFGGITACDAVANGIVKALEILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NV+ G R+++E+    VI A  +D  A K
Sbjct: 343 PLVVRLDGNNVEEGRRILSEANHPLVIQADTMDSGADK 380


>gi|312138582|ref|YP_004005918.1| succinyl-CoA synthetase beta subunit/malate thiokinase [Rhodococcus
           equi 103S]
 gi|325676351|ref|ZP_08156030.1| succinyl-CoA ligase subunit beta [Rhodococcus equi ATCC 33707]
 gi|311887921|emb|CBH47233.1| succinyl-CoA synthetase beta subunit/malate thiokinase [Rhodococcus
           equi 103S]
 gi|325552912|gb|EGD22595.1| succinyl-CoA ligase subunit beta [Rhodococcus equi ATCC 33707]
          Length = 389

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 222/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K++VP + G V  +V  A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHDVPTSAGRVTDTVAGAREIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATADDAQTHAENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D  L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTIQKLWEVFVKEDALLVEVNPLVRTPDDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALETLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVATMDEAADK 380


>gi|302553654|ref|ZP_07305996.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471272|gb|EFL34365.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
          Length = 393

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/397 (35%), Positives = 215/397 (54%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + E   +IL E Y
Sbjct: 57  -------GGVKLAATTDEAVEHATNILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGM+IEEVA   P+ + K+ ID + GV       +    + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMEIEEVAATRPEAVAKIAIDAIDGVDKAKAQEIVAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+  F   D  L+E+NPL  + +G +  LD K+S D+NA +RH + 
Sbjct: 163 PAEVADKVADVLIKLWDTFVKSDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRHPEY 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           +EL D    +  E  AK   L+Y+ L+G +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 EELHDKEAANPLEAAAKAKGLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGEAHKNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLESKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++  PLV+RL+G N ++G +++ +    ++  +D  D
Sbjct: 343 EVTKPLVVRLDGNNAELGRQILDDRNHPLVQRVDTMD 379


>gi|207344930|gb|EDZ71911.1| YGR244Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 277

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 116/273 (42%), Positives = 178/273 (65%), Gaps = 3/273 (1%)

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           +DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L     A
Sbjct: 1   MDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFSPDA 60

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNALYRHLDIQ 240
           + +      NLYK F ++D + +EINPL  +++    ++   D+K  FDDNA +R   I 
Sbjct: 61  QDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIY 120

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFLD G
Sbjct: 121 SWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCG 180

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V RL+
Sbjct: 181 GGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQ 240

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G  V+ G  +I +SG+ + +  +LD AA+K+V 
Sbjct: 241 GTKVEEGRDIINKSGVKIYSFDELDPAAKKVVE 273


>gi|21224885|ref|NP_630664.1| succinyl-CoA synthetase subunit beta [Streptomyces coelicolor
           A3(2)]
 gi|21264032|sp|O87840|SUCC2_STRCO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-2;
           AltName: Full=Succinyl-CoA synthetase subunit beta-2;
           Short=SCS-beta-2
 gi|3288606|emb|CAA19778.1| succinyl-coa synthetase beta chain [Streptomyces coelicolor A3(2)]
          Length = 383

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/371 (36%), Positives = 200/371 (53%), Gaps = 23/371 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L +++ + V +  V  S   A    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFKEHGIVVPRAEVTDSPERAREIARALGG-RAVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +         R ILG  +        G  V+ V + +  +I RE Y+
Sbjct: 57  -------GGVRLAADPAEAEEAARHILGMDI-------RGHTVDTVMLAEPCEIEREFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR SG    IAS +GG +IEEVA   P+ + ++ +DP  GV +     + D   L 
Sbjct: 103 SYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q      D    L+K    +D  L+E+NPL+    GR+  LD K++ DDNA +R     
Sbjct: 163 PQTV----DTLVRLWKVLVREDALLVEVNPLVRTAEGRIVALDGKVTLDDNARFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E R   + DS E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 ETRQ-EDADSLEARAGAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    ++ SD  V+ +L+N+FGGI  CD +  GI+ A+ EV++  PLV+RL+
Sbjct: 278 GGASARVMADGLSVVLSDPDVRSVLVNVFGGITACDAVADGIVRALDEVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLI 371
           G N   G  L+
Sbjct: 338 GNNAARGRALL 348


>gi|302558887|ref|ZP_07311229.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
 gi|302476505|gb|EFL39598.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
          Length = 392

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 220/397 (55%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + E   +IL E Y
Sbjct: 57  -------GGVKLAATPDEAVEHATNILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GG++IEEVA   P+ + K  ID   GVT      + +    
Sbjct: 103 VSFLLDRANRTFLSIASVEGGVEIEEVAASRPEAVAKTPIDANEGVTPAKAREIVEAANF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F  +D  L+E+NPL  + +G +  LD K+S D+NA +R  + 
Sbjct: 163 PAEVADKVANVLVTLWKTFVAEDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRQPEH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           + L+D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 EALQDKASANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV----- 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +     
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADRGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|255945469|ref|XP_002563502.1| Pc20g10080 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588237|emb|CAP86337.1| Pc20g10080 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 417

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 143/394 (36%), Positives = 227/394 (57%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+ +  LL+++ +PV  G ++++   A+  +  L GP  ++K+Q+ AGGRGKG+F 
Sbjct: 25  LSLLEHHSHNLLKEFKIPVPPGFLVTTPEKAKEVVSVLNGP-SMIKAQVLAGGRGKGKFN 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D + GVR+  S      +   +LG  L T QT   G RV+ +Y+     I +E Y 
Sbjct: 84  ---SDGQSGVRLVESPNEAFRNATNMLGYYLTTAQTPQDGLRVDELYIYKAVSIAQEFYF 140

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++  DR       + S+ GG +IE    +    + KL      G+T E  A +   L   
Sbjct: 141 AMTFDRQRAAPVLLISSAGGTNIESNMDN----LHKLYFGLSTGITDEIDAYIQAELGFS 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   + K F +KD +LLE+NPL+    G    LD+K  FDD A YR  ++ 
Sbjct: 197 DAEMKDIHRILVQMLKLFKEKDATLLELNPLVRSGEGEFICLDAKFGFDDAARYRQKELF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + S E   E +  +  L+Y+ L+GNIG +VNGAGLAMAT D+I L+GG  ANFLDVG
Sbjct: 257 GLEERSPEQEEEHQLAELGLNYVRLEGNIGNIVNGAGLAMATNDLISLHGGKCANFLDVG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           G   ++ ++ AF+I+ +D  ++GILINI+GGI+RCD++ + I++A  E+     P+V+RL
Sbjct: 317 GSTTKEALSRAFRILKNDQRIRGILINIYGGIVRCDMIAEAIVAAAAEMGGFKCPVVVRL 376

Query: 360 EGANVDIGNRLIAESGL-NVITAIDLDDAAQKIV 392
           +G N + G +LI +S L N++   + + AAQ+IV
Sbjct: 377 QGTNAEKGLKLIEQSELDNLVVEPEFEKAAQRIV 410


>gi|330470054|ref|YP_004407797.1| succinyl-CoA synthetase subunit beta [Verrucosispora maris
           AB-18-032]
 gi|328813025|gb|AEB47197.1| succinyl-CoA synthetase subunit beta [Verrucosispora maris
           AB-18-032]
          Length = 392

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 139/396 (35%), Positives = 218/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +  ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA D P+K+ K  ID + GV       + +     
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAADTPEKVVKAPIDAVKGVDEAKAREIVEAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +    L++AF  +D +L+E+NPL   K+G+L +LD+K+S D+NA +RH D +
Sbjct: 163 AEVADQVVETAVGLWQAFVAEDATLVEVNPLAKTKDGKLLLLDAKVSLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQATVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA    +A   +I+ SD SVK + +N+FGGI  CD +  GI+ A+  +K     
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVQALDLLKQRGEE 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  PLV+RL+G N + G  ++  +   +I  +D  D
Sbjct: 343 VTKPLVVRLDGNNAEAGRAILDGANNPLIERVDTMD 378


>gi|229495126|ref|ZP_04388872.1| succinyl-CoA synthetase beta chain [Rhodococcus erythropolis SK121]
 gi|229318057|gb|EEN83932.1| succinyl-CoA synthetase beta chain [Rhodococcus erythropolis SK121]
          Length = 389

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 229/407 (56%), Gaps = 29/407 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTSAGRVTDTVAGAREIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+    + + +++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSPDVDAAVANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D  L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFIGEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 AFEDRDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK---IVHAVK 396
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K   + HA K
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVATMDEAADKAAELAHAAK 389


>gi|312199954|ref|YP_004020015.1| succinyl-CoA synthetase, subunit beta [Frankia sp. EuI1c]
 gi|311231290|gb|ADP84145.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EuI1c]
          Length = 388

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/393 (37%), Positives = 217/393 (55%), Gaps = 26/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL  ++ VPV  G   ++   A +    L G + VVK+Q+ A         
Sbjct: 1   MDLFEYQAKALFAEHGVPVPTGKTAATPEEARAIAAELGGKV-VVKAQVKA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V             ILG  +        G  V+ V VE  ++I  E Y 
Sbjct: 51  -GGRGKAGGVKVADGPDDAFEKASAILGMDI-------KGHTVHSVLVEQASNIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + ++ IDPL GV       +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATKPEALARIHIDPLAGVDLAKAREIAVAAKLP 162

Query: 181 GQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A +DG  +L   L++ F   D +L+E+NPLI+   G +  LD K+S D+NA +RH + 
Sbjct: 163 -EAALDGAAELLTKLWEVFVQADATLVEVNPLILTGEGTVVALDGKVSLDENADFRHPEN 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
           + L D S  D  E +AK+  L+Y+ L G +G + NGAGL M+T+D++      +GG  PA
Sbjct: 222 EALVDNSAVDPLEQKAKEKGLNYVKLTGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINI 353
           NFLD+GGGA  + +A    II SD SVK + +NIFGGI  CD +  GI+ A++ V  I  
Sbjct: 282 NFLDIGGGASAEVMANGLSIILSDPSVKSVFVNIFGGITACDAVANGIIKALELVGDITT 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G N + G R++AE+ L V+  +D  D
Sbjct: 342 PLVVRLDGNNAEEGRRILAEANLPVVKPVDTMD 374


>gi|48478075|ref|YP_023781.1| succinyl-CoA synthetase subunit beta [Picrophilus torridus DSM
           9790]
 gi|48430723|gb|AAT43588.1| succinyl-CoA synthetase beta chain [Picrophilus torridus DSM 9790]
          Length = 368

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 147/398 (36%), Positives = 220/398 (55%), Gaps = 32/398 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + R Y +PV  G  I         I+ +  P+  +KSQI  G RGK    
Sbjct: 1   MNLYEYMGKEIFRNYGIPVPDGYTIEKT----DEIRDVSYPV-AIKSQILIGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +    +    E+LGS +        G  V  + +E   DI +ELYL
Sbjct: 53  -------GGIKFADNKNDAVKYASELLGSKI-------NGMTVTKLLIEKKLDIKKELYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DRT+     IAST+GGMDIEEV  D   KI K +IDPLIG +      +   ++L 
Sbjct: 99  SITMDRTNRAPVIIASTEGGMDIEEVPDD---KIVKRVIDPLIGYSQYIGREIVSSMKLD 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   LY+ F  +D  L+EINPL+I  N  +   DSKI  DDNAL+RH +I 
Sbjct: 156 ADLSKSFLEILERLYRVFMGEDALLVEINPLVIDGNKNIIAADSKIVLDDNALFRHKEIN 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  E+   EIE++  + ++I +DG+IG + NGAGL MAT+D + L+   P NFLD+G
Sbjct: 216 -IRD-PEKTELEIESQSKSFTFIEMDGDIGVIANGAGLTMATLDALTLHNLKPRNFLDLG 273

Query: 301 GGADQDKVAAAFK-IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G    D V  AF  ++ +D  +  I +NIFGG+ + D +  GI+++ KE  I  P+V+RL
Sbjct: 274 GTDSIDIVKDAFSFVMKADPDI--IFVNIFGGVTKADTVANGIVASKKEFNITKPIVVRL 331

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G + D G R++ ++G+N  +  +++DA   IV   +G
Sbjct: 332 SGIHEDEGRRILKDNGINAFS--NMNDAILDIVKIKEG 367


>gi|15826978|ref|NP_301241.1| succinyl-CoA synthetase subunit beta [Mycobacterium leprae TN]
 gi|221229456|ref|YP_002502872.1| succinyl-CoA synthetase subunit beta [Mycobacterium leprae Br4923]
 gi|21264063|sp|Q9Z5H8|SUCC_MYCLE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778445|sp|B8ZU00|SUCC_MYCLB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|4455691|emb|CAB36665.1| probable succinyl-CoA synthetase beta subunit [Mycobacterium
           leprae]
 gi|13092525|emb|CAC29663.1| succinyl-CoA synthase [beta] chain [Mycobacterium leprae]
 gi|219932563|emb|CAR70248.1| succinyl-CoA synthase [beta] chain [Mycobacterium leprae Br4923]
          Length = 393

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 222/404 (54%), Gaps = 32/404 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP  +G V  S   A++    +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPGIQGRVTDSAEGAKTIAMEIGRPV-MVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPEEAYQQAKNILGLDI-------KGHIVKKLLVVEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+     L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLACARSIAQQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
            +           L++ F  +D +L+E+NPL+         +G++  LD K++ D NA +
Sbjct: 163 AEVLDAAAATIAKLWELFVAEDATLVEVNPLVRTPSRGYGSSGKILALDGKVTLDANARF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYG 290
           R     E  D +  D  E +AKQHNL+YI LDG +G + NGAGL M+T D++    + +G
Sbjct: 223 RQPGHAEFEDRAATDPLEWKAKQHNLNYIKLDGEVGIIGNGAGLTMSTFDVVAYAGEQHG 282

Query: 291 GA-PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           G  PANFLD+GGGA  + +AA+  ++  D  VK + +NIFGGI  CD +  GI+ A++ +
Sbjct: 283 GVKPANFLDIGGGASAEVMAASLDVVLGDVQVKSVFVNIFGGITTCDTVATGIVKALEIL 342

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
             + N PLV+RL+G NV  G R++AE+   ++  +  +D+AA K
Sbjct: 343 GDEANKPLVVRLDGNNVGEGRRILAEANHPLVMLVPTMDEAANK 386


>gi|239979921|ref|ZP_04702445.1| succinyl-CoA synthetase subunit beta [Streptomyces albus J1074]
 gi|291451776|ref|ZP_06591166.1| succinyl-CoA synthetase subunit beta [Streptomyces albus J1074]
 gi|291354725|gb|EFE81627.1| succinyl-CoA synthetase subunit beta [Streptomyces albus J1074]
          Length = 392

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 221/397 (55%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + E   +I+ E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ +D   GVT E    +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVDSNTGVTIEKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL  + +G +  LD K+S D+NA +R  D 
Sbjct: 163 PAEVAEKVAEVMVTLWDTFVAEDALLVEVNPLAKVASGEVLALDGKVSLDENADFRQPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKTKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|145222455|ref|YP_001133133.1| succinyl-CoA synthetase subunit beta [Mycobacterium gilvum PYR-GCK]
 gi|315442901|ref|YP_004075780.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Mycobacterium
           sp. Spyr1]
 gi|189081750|sp|A4T6V7|SUCC_MYCGI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145214941|gb|ABP44345.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           gilvum PYR-GCK]
 gi|315261204|gb|ADT97945.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. Spyr1]
          Length = 387

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 222/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  S   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDSAEDAK-AIATEIGKPVMVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     + S +GGM+IEEVA   P ++ K+ ++ + GV       + +   L 
Sbjct: 103 SFLLDRSNRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVNAVKGVDLAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFTKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQEGHK 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 EFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDSQVKSVFVNVFGGITSCDAVANGIVKALEILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G NVD G R++AE+    V+ A  +D  A K
Sbjct: 343 PLVVRLDGNNVDEGRRILAEANHPLVVQAETMDSGADK 380


>gi|158317722|ref|YP_001510230.1| succinyl-CoA synthetase subunit beta [Frankia sp. EAN1pec]
 gi|226734954|sp|A8LAW3|SUCC_FRASN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|158113127|gb|ABW15324.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EAN1pec]
          Length = 388

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/393 (37%), Positives = 219/393 (55%), Gaps = 26/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G + ++   A   I T  G   VVK+Q+ A         
Sbjct: 1   MDLFEYQAKKLFAEHGVPVPTGKIATTPQQARE-IATELGGKVVVKAQVKA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V             ILG  +        G  V+ V VE  ++I  E Y 
Sbjct: 51  -GGRGKAGGVKVADGPDDAFEKASAILGMDI-------KGHTVHSVLVEQASNIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + ++ IDPL GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATNPEALARIHIDPLTGVDAAKAREIAVAAKLP 162

Query: 181 GQARIDGGD-LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A I+G   L   L++ F   D +L+E+NPLI+  +G++  LD K++ D+NA +RH + 
Sbjct: 163 -EAAIEGASVLLVKLWEVFVKADATLVEVNPLILTGDGKVIALDGKVTLDENADFRHPEN 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
            EL DV+  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++      +GG  PA
Sbjct: 222 AELVDVAAVDPLEQKAKEKGLNYVKLEGQVGIIGNGAGLVMSTLDVVTYAGEEFGGQRPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINI 353
           NFLD+GGGA  + +A    II SD SVK + +NIFGGI  CD +  GI+ A+  V  ++ 
Sbjct: 282 NFLDIGGGASAEVMANGLSIILSDPSVKSVFVNIFGGITACDAVANGIVQALAIVGDVST 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G N + G R++ E+ L V+  +D  D
Sbjct: 342 PLVVRLDGNNAEEGRRILKEANLPVVKPVDTMD 374


>gi|238581854|ref|XP_002389745.1| hypothetical protein MPER_11085 [Moniliophthora perniciosa FA553]
 gi|215452342|gb|EEB90675.1| hypothetical protein MPER_11085 [Moniliophthora perniciosa FA553]
          Length = 227

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/208 (51%), Positives = 152/208 (73%)

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDV 245
           +  D+F NLY+ F +KD + +EINP+   K+G++  +D+K  FDDNA +R  DI  LRD+
Sbjct: 17  EAADIFINLYRIFKEKDATQIEINPMAETKDGKVLCMDAKFGFDDNAEFRQEDIFALRDI 76

Query: 246 SEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ 305
           S+E+  E+EA++ NL++I LDG+IGC+VNGAGLAMATMD++ L+GG PANFLDVGGGA  
Sbjct: 77  SQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLSLHGGNPANFLDVGGGATP 136

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
           + V  AF+I+ +D+ VK I INIFGGIMRCD + +G++ A KE+ + IPLV+RL+G    
Sbjct: 137 ETVKKAFEILLADTKVKSIFINIFGGIMRCDYIAEGVIKATKELNMTIPLVVRLKGTKEQ 196

Query: 366 IGNRLIAESGLNVITAIDLDDAAQKIVH 393
               +I ESGL  + +  LD+AA++ V 
Sbjct: 197 EAKDMIKESGLKTMHSDGLDEAAERAVQ 224


>gi|294814560|ref|ZP_06773203.1| succinyl-CoA synthetase subunit beta [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442950|ref|ZP_08217684.1| succinyl-CoA synthetase subunit beta [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327159|gb|EFG08802.1| succinyl-CoA synthetase subunit beta [Streptomyces clavuligerus
           ATCC 27064]
          Length = 391

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 221/396 (55%), Gaps = 27/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREVTERLGG-RSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS +  +    +ILG  +     G T  +V  +  E   +I  E Y+
Sbjct: 57  -------GGVKLASSPEDAVEKAGQILGMDI----KGHTVHKV--MLAETAPEIAEEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGMDIEEVA   P+ + K+ +D   GVT E  A +    +  
Sbjct: 104 SYLLDRTNRTFLAMASVEGGMDIEEVAATKPEALAKIPVDANEGVTPEKAAEIVAAAKFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L+K F  +D  L+E+NPL  + +GR+  LD K+S D NA +R    +
Sbjct: 164 AEVADQVAEILVTLWKTFVAEDALLVEVNPLAKVADGRVIALDGKVSLDANADFRQPGHE 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 224 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 284 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEE 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 344 VTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|262201313|ref|YP_003272521.1| succinyl-CoA synthetase subunit beta [Gordonia bronchialis DSM
           43247]
 gi|262084660|gb|ACY20628.1| succinyl-CoA synthetase, beta subunit [Gordonia bronchialis DSM
           43247]
          Length = 387

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/398 (33%), Positives = 219/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V      A +  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTTPGRVTDDAADARAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     S    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAQSHAENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEATARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D+NA +RH D  
Sbjct: 163 AEVLDAAAVTIAKLWEVFVAEDATLVEVNPLVRTPDDQILALDGKVTLDENADFRHPDHD 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G A     PAN
Sbjct: 223 EFADKDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+ ++  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALNKLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           PLV+RL+G  V+ G +++A++   ++T A  +D  A K
Sbjct: 343 PLVVRLDGNKVEEGRKILADANHPLVTLAETMDSGADK 380


>gi|226365051|ref|YP_002782834.1| succinyl-CoA synthetase subunit beta [Rhodococcus opacus B4]
 gi|254778448|sp|C1AWW6|SUCC_RHOOB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226243541|dbj|BAH53889.1| succinyl-CoA synthetase beta chain [Rhodococcus opacus B4]
          Length = 389

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/398 (33%), Positives = 225/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHEVPTSAGRVTDTVAGAREIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  + + +  ++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSADVDAAQANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D  L+E+NPL+   N  +  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFIKEDALLVEVNPLVRTPNDEILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 AFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILAEAAHPLVTVVGTMDEAADK 380


>gi|297203635|ref|ZP_06921032.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
 gi|197717231|gb|EDY61265.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
          Length = 376

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/391 (34%), Positives = 208/391 (53%), Gaps = 24/391 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E++A+AL  +  +PV +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHEARALFEERGIPVPRAEVTDSPQEARVMARRLGGSV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +         R ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVRLATDPAEAERTARRILGKDI-------KGHPVRKVMLAQPVDIESEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR +G    IAS +GG DIEEVA   P+ + ++ +DP  GVTS     + +   L 
Sbjct: 103 AYVLDRAAGRFLAIASAEGGTDIEEVAAVRPEAVARIPVDPAEGVTSAKAGEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q      D+   L++    +D  L+E+NPL+  + G +  LD K++ DDNA +R     
Sbjct: 163 PQTV----DVLVRLWEVLVGQDAVLVEVNPLVRTRQGHILALDGKVTLDDNARFRQ-SRW 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
               ++ +D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 218 GAETIAHDDPLEAAAAAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK + +N+FGGI  CD +  GI+ A+ EV++  PLV+RL+
Sbjct: 278 GGASAQVMADGLTVILSDPAVKSVFVNVFGGITACDAVADGIVRALDEVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQK 390
           G N   G  ++ E    ++  A  +D A ++
Sbjct: 338 GNNASRGRAVLDERAHPLVQQATTMDGAVRR 368


>gi|116283894|gb|AAH52774.1| Sucla2 protein [Mus musculus]
          Length = 224

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 110/199 (55%), Positives = 151/199 (75%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
            Y  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I +L+D S+ED R+ 
Sbjct: 4   FYNLFLKHDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIFDLQDWSQEDERDK 63

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  AFK
Sbjct: 64  EAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVQQVTEAFK 123

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           +ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+
Sbjct: 124 LITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIAD 183

Query: 374 SGLNVITAIDLDDAAQKIV 392
           SGL ++   DLD+AA+ +V
Sbjct: 184 SGLKILACDDLDEAAKMVV 202


>gi|297563044|ref|YP_003682018.1| succinyl-CoA synthetase subunit beta [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847492|gb|ADH69512.1| succinyl-CoA synthetase, beta subunit [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 395

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 215/401 (53%), Gaps = 34/401 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EY+AK L  +Y VP+ +G +  +   A  A   + G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYEAKQLFGEYGVPLVEGEIADTPEQARLAAGRI-GHRVVVKAQVKTGGRGK---- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    +   +   +ILG  +        G  V  V +E+ +DI  E Y 
Sbjct: 56  ------AGGVKVAEGPEDAGARAEQILGMDI-------KGHTVRRVLIEEASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     I S +GGMDIEEVA+  P+ + +  + P  GV      ++C    L 
Sbjct: 103 SFLLDRANRTFLSICSAEGGMDIEEVARTRPEAVVRTPVGPG-GVDHGAALAICRAAGLP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   L++    +D +L+E+NPL+   +GR+  LD K++ D NA +RH +  
Sbjct: 162 EEVRDCAAQVVTRLWQVAVGEDATLVEVNPLVRTADGRIIALDGKVTLDGNAAFRHPERT 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
              D ++ D RE  A+   L+Y+ LDG +G + NGAGL M+T+D++   GGA     PAN
Sbjct: 222 PFADGADTDERERMARARGLNYVRLDGEVGVIGNGAGLVMSTLDVVAHAGGAHGGVRPAN 281

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV------ 349
           FLD+GGGA  + +A   +I+  D SV+ +L+N+FGGI  CD + +GI+ A+  +      
Sbjct: 282 FLDIGGGASAEVMANGLEIVLGDPSVRSVLVNVFGGITACDAVAEGIVRALDMLEGRSGD 341

Query: 350 ----KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
               ++  PLV+RL+G N ++G  ++ +     +  +D  D
Sbjct: 342 EGFDQLGKPLVVRLDGNNAELGREILTKRAHPAVQQVDTMD 382


>gi|54026965|ref|YP_121207.1| succinyl-CoA synthetase subunit beta [Nocardia farcinica IFM 10152]
 gi|81373212|sp|Q5YPP8|SUCC_NOCFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54018473|dbj|BAD59843.1| putative succinyl-CoA synthetase beta subunit [Nocardia farcinica
           IFM 10152]
          Length = 388

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 217/387 (56%), Gaps = 25/387 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP ++G V  +   A +    +  P+ ++KSQ+  GGRGK    
Sbjct: 1   MDLFEYQAKELFVKHGVPSSEGRVTDTAEDARAIAAEIGKPV-MIKSQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G     + V +  DI  E Y+
Sbjct: 57  -------GGVKYAATPEDAFTHAQNILGLDI-------KGHITKKILVAEAKDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+      +  LD K++ D+NA +RH +  
Sbjct: 163 AEVLDAAAVTIQKLWEVFVAEDATLVEVNPLVRTPQDEILALDGKVTLDENAGFRHPEHD 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  DV   D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFADVDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVKALEILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT 380
           PLV+RL+G  VD G +++ E+   ++T
Sbjct: 343 PLVVRLDGNKVDEGRKILVEAAHPLVT 369


>gi|320095657|ref|ZP_08027313.1| succinate--CoA ligase (ADP-forming) subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319977378|gb|EFW09065.1| succinate--CoA ligase (ADP-forming) subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 392

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/387 (35%), Positives = 220/387 (56%), Gaps = 32/387 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKG 57
           M+++EYQA+ L RK+ VPV    + ++   A  A + L G    L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARELFRKHGVPVLDFELATTPGQARDAAERLLGAGASLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +          ILG  +        G  V  + +  GADI  E
Sbjct: 61  ----------GGVKLARTPDEAREKAEAILGLDI-------KGHVVERLMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DP +G+ + DVA    ++
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPAVGIDA-DVAR--RIV 160

Query: 178 ELQGQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           +  G  R  G  + P    L++ + D+D +L+E+NPL+   +G +  +D K++ DDNA +
Sbjct: 161 DEAGFDRAAGEAIAPVLRTLWEVYRDEDATLVEVNPLVASPDGSIWAVDGKVTLDDNARF 220

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH    +L D + +D RE  AK+  L+Y+ L+G +G + NGAGL M+T+D++ + G    
Sbjct: 221 RHPAHADLVDAAAQDPREAAAKEAGLNYVRLEGQVGVIGNGAGLVMSTLDVVAMAGEDLR 280

Query: 292 -APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
             PANFLD+GGGA    +A    II  D  V+ + +N+FGGI  CD + +GIL A++E+ 
Sbjct: 281 MRPANFLDIGGGASAAVMAKGLGIILGDEQVRSVFVNVFGGITACDEVARGILGALEELG 340

Query: 350 -KINIPLVMRLEGANVDIGNRLIAESG 375
              + PLV+RL+G  V  G  ++A +G
Sbjct: 341 GAASKPLVVRLDGNKVAEGRAILAAAG 367


>gi|227506176|ref|ZP_03936225.1| succinate--CoA ligase (ADP-forming) [Corynebacterium striatum ATCC
           6940]
 gi|227197200|gb|EEI77248.1| succinate--CoA ligase (ADP-forming) [Corynebacterium striatum ATCC
           6940]
          Length = 390

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/389 (35%), Positives = 215/389 (55%), Gaps = 33/389 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VP  +G+V +S   AE A   L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPTLRGIVATSAVQAEEAAAKLGTPIVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG   I   T      V  V V +GADI  E Y 
Sbjct: 58  -------GGVKLAKSPAEAAEKAEEILGLK-IKDHT------VRKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDML 177
           S+L+DRT      + S +GG++IE++A + P+ + +    PL G+T   + D+A     +
Sbjct: 104 SILLDRTKRRYLAMLSKEGGVEIEKLAAERPEALIRRSFSPLDGMTDTLARDMAYEAGFV 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           E      +    +F  LYK +  +D +L+E+NPL+    G +  LD K++ D NA +RH 
Sbjct: 164 EEDVAKLVP---VFKQLYKVYTAEDATLVEVNPLVKTAQGDIIALDGKVTLDGNAEFRHS 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           +   L D    D  E++A+Q  L+Y+ LDG++G + NGAGL M+T+D++   G       
Sbjct: 221 EHAALHDHGATDPLELKAQQMGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEDLPNQP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
            PANFLD+GGGA+ + +    ++I  D  VK + +N+FGGI  CD + KGI+ A K +  
Sbjct: 281 KPANFLDIGGGANAEVMTNGLEVILGDPQVKSVFVNVFGGITACDEVAKGIVQAYKILAS 340

Query: 352 N----IPLVMRLEGANVDIGNRLIAESGL 376
           +     PLV+RL+G N ++G  ++ ++ L
Sbjct: 341 DGIEPKPLVVRLDGNNAELGRSILDDAHL 369


>gi|182436516|ref|YP_001824235.1| succinyl-CoA synthetase subunit beta [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326777138|ref|ZP_08236403.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Streptomyces cf.
           griseus XylebKG-1]
 gi|226734992|sp|B1W3P6|SUCC_STRGG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|178465032|dbj|BAG19552.1| putative succinyl-CoA synthetase beta chain [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326657471|gb|EGE42317.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Streptomyces cf.
           griseus XylebKG-1]
          Length = 393

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/403 (35%), Positives = 220/403 (54%), Gaps = 41/403 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATEKLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + E   +I  E Y
Sbjct: 57  -------GGVKLAADPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++ + GV       +    E+
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGV------DIAKAREI 156

Query: 180 QGQARIDG------GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
             QA+          +    L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA 
Sbjct: 157 VAQAKFPADVAEGVAEALVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENAD 216

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-- 291
           +R  D + L D    +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G   
Sbjct: 217 FRQPDHEALEDKDAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENH 276

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-- 346
               PANFLD+GGGA  + +A   +II  D  V+ + +N+FGGI  CD +  GI+ A+  
Sbjct: 277 GNVKPANFLDIGGGASAEVMANGLEIILGDPDVRSVFVNVFGGITACDEVANGIVQALAL 336

Query: 347 ---KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              K  K+  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 337 LESKGEKVEKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|171185915|ref|YP_001794834.1| succinyl-CoA synthetase subunit beta [Thermoproteus neutrophilus
           V24Sta]
 gi|170935127|gb|ACB40388.1| succinyl-CoA synthetase, beta subunit [Thermoproteus neutrophilus
           V24Sta]
          Length = 379

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 138/395 (34%), Positives = 218/395 (55%), Gaps = 24/395 (6%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HEY+AK LL KY V +  G +  +   A  A K +  P+ V+K+Q+   GRGK      
Sbjct: 1   MHEYEAKELLAKYGVEIPPGRLALTPDEALKAAKEIGTPV-VLKAQVVVAGRGKA----- 54

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GG++V  + +      + + G  +        G  V  +YV    +  RE+YLSL
Sbjct: 55  -----GGIKVAKTPEEAYELSKAMFGMNI-------KGLVVRKIYVTKYVEAEREMYLSL 102

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           ++DR S    F+AS  GG+DIEE+AK  P+KI ++ +DP +G+    +  +   L  +  
Sbjct: 103 IIDRASRRYLFLASPVGGVDIEEIAKASPEKIKRVYVDPAVGLREFHIRQIGLWLGFRPG 162

Query: 183 ARIDG--GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            R       +   +Y+   + D  L+E NPL + K+G +  LD+++  DDNALYRH D++
Sbjct: 163 TRQWQQISSIVQAMYRVMVEYDAELVESNPLALTKDGDVIPLDARVIVDDNALYRHSDLE 222

Query: 241 ELRDVSEEDSREIEA--KQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  +    D  E EA  K+    Y+ LDG+IG + NGAGL M+TMD++  +GG PANFLD
Sbjct: 223 KALEEDPRDVTEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMSTMDLVYHFGGRPANFLD 282

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA ++ V  A K++     V+ + INIFGGI R D +  G+  A+ E      +V+R
Sbjct: 283 IGGGASREVVREAVKVLLKHPRVRVVFINIFGGITRADEVALGVKDALAETGATKKIVVR 342

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           L+G N + G  +++E G+ +    + ++AAQ+ V 
Sbjct: 343 LKGTNEEQGRAILSEVGVPLFE--NAEEAAQRAVE 375


>gi|322370343|ref|ZP_08044902.1| succinyl-CoA synthetase subunit beta [Haladaptatus paucihalophilus
           DX253]
 gi|320550051|gb|EFW91706.1| succinyl-CoA synthetase subunit beta [Haladaptatus paucihalophilus
           DX253]
          Length = 380

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/400 (34%), Positives = 209/400 (52%), Gaps = 33/400 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P     +  SV     A + +  P+  VK+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKEVFSDAGIPTPDSALAESVEEVVEAAEDIGYPV-AVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++            +ILG  L        G  V  V VE   D + ELY+
Sbjct: 57  -------GGIKLAEDRDEAEEAAEDILGMDL-------KGYTVEQVLVEGAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG+DIE VA++ P  I +  IDP  G+             + 
Sbjct: 103 GVTMDRGEGKPVAMVSTKGGVDIEAVAEETPDAIAREHIDPAFGMHPYQARKAVFDAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +D   +   LY  + DKD +  EINPL++  +  +   D+ ++ DD+AL+RH D+ 
Sbjct: 163 KDIAMDVAGVLTTLYDLWSDKDANDAEINPLMVTSDDEVIAADAVLNIDDDALFRHPDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + S ED  E +A ++   Y+ LDGN+G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMEEDSYEDDLERKAGEYGFDYVRLDGNVGIIGNGAGLVMTTLDLVDYYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++V  A  ++ SD +V  ++ NIFGGI R D + KGI  A++ + +I  P+V+RL
Sbjct: 283 GGAKAERVTNALDMVFSDENVDSVVFNIFGGITRGDEVAKGINEALESLDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITA------IDLDDAAQKIVH 393
            G N        AE G++++          L+DA Q+ V 
Sbjct: 343 AGTN--------AEEGMDILNTDLVQVEATLEDAVQRAVE 374


>gi|302869843|ref|YP_003838480.1| succinyl-CoA synthetase subunit beta [Micromonospora aurantiaca
           ATCC 27029]
 gi|315501305|ref|YP_004080192.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. L5]
 gi|302572702|gb|ADL48904.1| succinyl-CoA synthetase, beta subunit [Micromonospora aurantiaca
           ATCC 27029]
 gi|315407924|gb|ADU06041.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. L5]
          Length = 392

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/396 (34%), Positives = 219/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +  ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P+++ K  ID   GV       +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPERVVKAPIDANTGVDEAKAREIVTAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L++AF  +D +L+E+NPL   K+G+L +LD+K++ D+NA +RH D +
Sbjct: 163 AEIADQVVEVAVKLWQAFVAEDATLVEVNPLATTKDGKLLLLDAKVTLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
            L D +  D  E  AK  +L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 ALVDQASVDPLEQAAKAKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +I+ SD SVK + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAEVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              PLV+RL+G N + G  ++  +   +I  +D  D
Sbjct: 343 ATKPLVVRLDGNNAEAGRAILDGAANPLIQRVDTMD 378


>gi|148273732|ref|YP_001223293.1| succinyl-CoA synthetase subunit beta [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|189029902|sp|A5CU44|SUCC_CLAM3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|147831662|emb|CAN02631.1| succinyl-CoA synthetase beta chain [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 387

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/389 (34%), Positives = 214/389 (55%), Gaps = 25/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   Y VPV  G+V  +     +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFESYGVPVLPGIVADTAEEVRAAAEKLGGTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S  +       ILG  +        G  V+ V V  GA I +E Y 
Sbjct: 57  -------GGVKVAQSADAAFEAAEGILGLDI-------KGHTVHRVMVAAGARIAQEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       +AS +GGM+IEE+A   P+ + ++ IDP+ G+ +     +       
Sbjct: 103 SILLDRAERSYLCLASYEGGMEIEELAVTRPEALARIEIDPVAGIDAAKAEEIARAASFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  + D+D +L+E+NPL++ ++G +  LD K++ D+NA  RH    
Sbjct: 163 EELIAKVAPVFERLWWVYRDEDATLVEVNPLVLTESGEIIALDGKVTLDENAGLRHEGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  D  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 ALEDAAAADPLEAKAKESDLNYVKLDGQVGIIGNGAGLVMSTLDVVSYAGEQHGGVRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  V  + +N+FGGI  CD +  GI+ A+ ++      
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVTSVFVNVFGGITSCDAVANGIVGALDKLGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI 382
           PLV+RL+G NV+ G R++ E    ++T +
Sbjct: 343 PLVVRLDGNNVEEGRRILEERAHPLVTVV 371


>gi|319947696|ref|ZP_08021910.1| succinyl-CoA synthetase subunit beta [Dietzia cinnamea P4]
 gi|319438646|gb|EFV93552.1| succinyl-CoA synthetase subunit beta [Dietzia cinnamea P4]
          Length = 388

 Score =  228 bits (582), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 219/399 (54%), Gaps = 27/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL  K++VP   G V  +   AE     +  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKALFAKHDVPTTPGRVADTAEEAEKVAAEIGKPV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    K   +   +ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKLAEDAKEARARAEDILGLDI-------KGHIVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +     + S +GG++IE+VA++ P ++ K+ IDP  GV       +     L 
Sbjct: 103 SFLVDRANRNYLAMCSVEGGVEIEQVAEESPDRLAKINIDPTEGVDVAKAREIAKAGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD-I 239
            +           LY+ F  +D SL+E+NPL+   N  +  LD K++ D+NA +RH D  
Sbjct: 163 EEVLDAAAVTIAKLYEVFVKEDASLVEVNPLVRTPNDEILALDGKVTLDENAEFRHKDTF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
            +  D    D  E +A +++L+Y+ LDG +G + NGAGL M+T+D++      +GG  PA
Sbjct: 223 ADFADAGTTDPLEQKAAENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ +  + N
Sbjct: 283 NFLDIGGGASAEVMANGLDVILGDEQVKSVFVNVFGGITACDAVANGIVKALEILGDEAN 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
            PLV+RL+G NV+ G +++AE+   ++T  D +D  A K
Sbjct: 343 KPLVVRLDGNNVEEGRKILAEANHPLVTLADNMDSGADK 381


>gi|284992795|ref|YP_003411349.1| succinyl-CoA synthetase subunit beta [Geodermatophilus obscurus DSM
           43160]
 gi|284066040|gb|ADB76978.1| succinyl-CoA synthetase, beta subunit [Geodermatophilus obscurus
           DSM 43160]
          Length = 387

 Score =  228 bits (582), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 222/393 (56%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ LL  + VPV  G V  +   AE+  + + G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLLASHGVPVLPGGVAETPEQAEAIAREI-GTTVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +   +  ++ILG  +        G   + V V   +DI  E Y 
Sbjct: 57  -------GGVKLADDAEDARARAQDILGLDI-------KGHITHRVMVAQASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     +AS +GGM+IE++A + P+ + ++ +D   GV +     + D     
Sbjct: 103 SYLLDRSNRTFLAMASVEGGMEIEQLAVERPEALARIPVDATTGVDTAKATEIVDAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   L++ F  +D +L+E+NPL    +G +  LD+K++ D+NA +RH + +
Sbjct: 163 AEVRDQVIAIAVQLWEVFAQEDATLVEVNPLAKAPDGTVLALDAKVTLDENARFRHQEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  D  E  AK+ +L+Y+ L+G +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 TLEDTAAADPLEAAAKEKDLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGEEFGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    II SD +VK + +N+FGGI  CD +  GI+ A++ +  +   
Sbjct: 283 FLDIGGGASAEVMANGLHIILSDPAVKSVFVNVFGGITACDAVANGIVHALQILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G R++AE+   ++T +D  D
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTLVDTMD 375


>gi|309811916|ref|ZP_07705688.1| succinate-CoA ligase, beta subunit [Dermacoccus sp. Ellin185]
 gi|308434128|gb|EFP57988.1| succinate-CoA ligase, beta subunit [Dermacoccus sp. Ellin185]
          Length = 394

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 218/398 (54%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +   + VPV  G   ++   A++A + +    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGQTATTPEEAKAAAEQIGAKSGGVTVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  S        ++ILG  +        G  V  V +  GA I  E
Sbjct: 61  ----------GGVKVAKSADEAEQYAKDILGMDI-------KGHTVGTVMIAQGAKIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR +     + S +GG++IE++A + P+ + ++ +DP +G+       +    
Sbjct: 104 YYFSILLDRANRSYLAMCSKEGGVEIEQLAVERPEALARIEVDPNVGIDGAKADEIVKAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L++ + D+D +L+E+NPL+  ++G +  LD K++ D+NA +RH 
Sbjct: 164 GFDDETAAKVAPVLVKLWETYRDEDATLVEVNPLVKTEDGDIIALDGKVTLDENAGFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------- 290
           D + L D +  D  E +AK  +L+Y+ LDGN+G + NGAGL M+T+D++   G       
Sbjct: 224 DHEALEDKAAADPLEAKAKALDLNYVKLDGNVGIIGNGAGLVMSTLDVVAYAGEDFTGGK 283

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
             PANFLD+GGGA  + +A    +I +D  VK + +N+FGGI  CD +  GI+ A+K++ 
Sbjct: 284 AKPANFLDIGGGASAEVMANGLDVILNDEQVKSVFVNVFGGITACDAVANGIVGALKKLG 343

Query: 350 -KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
                PLV+RL+G NV+ G  ++++    ++T +D  D
Sbjct: 344 DAATKPLVVRLDGNNVEEGRAILSDFNHPLVTVVDTMD 381


>gi|317508744|ref|ZP_07966396.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974]
 gi|316252959|gb|EFV12377.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974]
          Length = 388

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/392 (34%), Positives = 215/392 (54%), Gaps = 31/392 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELYLKHGVPTTPGAVTDTPEGAREIAERIGKPV-MVKAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + + + ADI  E Y 
Sbjct: 57  -------GGVKYAATPEDAYEHAKNILGLDI-------KGHVVKRLLIAEAADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR+ G    I S+ GGM+IEEVA   P+K+ K+ +D   GV   DVA   ++    
Sbjct: 103 SFLLDRSVGGFIAIVSSAGGMEIEEVAHTTPEKVAKIPVDYNAGV---DVAKARELAVAG 159

Query: 181 G--QARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G  +A +D   +    L++ F  +D +L+E+NPL    + ++  LD K++ D NA +RH 
Sbjct: 160 GLPEAVLDKAAVTISKLWEVFVKEDATLVEVNPLARTTDDQILALDGKVTLDGNAEFRHP 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----- 292
           D +E     E+D  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 220 DHEEFAVAVEQDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEGHKDVK 279

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA    +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+  +   
Sbjct: 280 PANFLDIGGGASASVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALDTLGDT 339

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAI 382
              P+V+RL+G NV++G +++AE    ++T +
Sbjct: 340 ATKPIVVRLDGNNVELGRQILAERAHPLVTEV 371


>gi|218458686|ref|ZP_03498777.1| succinyl-CoA synthetase subunit beta [Rhizobium etli Kim 5]
          Length = 194

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/174 (62%), Positives = 136/174 (78%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NIHEYQAKALL+ Y  PVA+GV +  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FKE
Sbjct: 1   NIHEYQAKALLKGYGAPVAEGVAVLKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFKE 60

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L  ++KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY S
Sbjct: 61  LSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYCS 120

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           LLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++  
Sbjct: 121 LLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISQ 174


>gi|302536354|ref|ZP_07288696.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. C]
 gi|302445249|gb|EFL17065.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. C]
          Length = 392

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/397 (35%), Positives = 225/397 (56%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATEKLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + E   +IL E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS  GGMDIE+VA++ P+K+ K+ ++   GVT E    + ++ + 
Sbjct: 103 VSYLLDRTNRTFLAMASVAGGMDIEQVAEETPEKLAKVPVNANEGVTIEKAREIVELAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F  +D  L+E+NPL  + +G +  LD K+S D+NA +R    
Sbjct: 163 PAEVAEKVAEVLVTLWKTFIAEDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRQPSH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
           +E  D +  +  E  AK+  L+Y+ LDG +G + NGAGL M+T+D++      +GG  PA
Sbjct: 223 EEFVDHAAANPLEAAAKEKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+K ++    
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 AVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|159039722|ref|YP_001538975.1| succinyl-CoA synthetase subunit beta [Salinispora arenicola
           CNS-205]
 gi|189081793|sp|A8M469|SUCC_SALAI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157918557|gb|ABV99984.1| succinyl-CoA synthetase, beta subunit [Salinispora arenicola
           CNS-205]
          Length = 392

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/396 (35%), Positives = 218/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++       ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGADETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P+K+ K  ID   GV +     +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKAPIDANTGVDAAMARQIITRAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  +L+KAF  +D +L+E+NPL     G L +LD+K+S D+NA +RH D +
Sbjct: 163 AEVVDQAVEVAVDLWKAFVAEDATLVEVNPLARTGQGGLLLLDAKVSLDENAAFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 ALVDQAAVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A   +I+ SD SVK + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  PLV+RL+G N + G  ++  +   +I  +D  D
Sbjct: 343 VTRPLVVRLDGNNAEAGRAILDGANNPLIQRVDTMD 378


>gi|145596325|ref|YP_001160622.1| succinyl-CoA synthetase subunit beta [Salinispora tropica CNB-440]
 gi|189081796|sp|A4XBE5|SUCC_SALTO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145305662|gb|ABP56244.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Salinispora
           tropica CNB-440]
          Length = 392

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/396 (34%), Positives = 218/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +  ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLTEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P+K+ K  ID   GV       +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKEPIDANTGVDVATARRIVTQAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  +L+KAF  +D +L+E+NPL     G L +LD+K+S D+NA +RH D +
Sbjct: 163 AEVADQTVEIAVDLWKAFVAEDATLVEVNPLAKTAEGGLLLLDAKVSLDENAAFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 ALVDQAAVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A   +I+ SD +VK + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPAVKSVFVNVFGGITACDAVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  PLV+RL+G N + G  ++  +   +I  +D  D
Sbjct: 343 VTRPLVVRLDGNNAEAGRAILDGANNPLIQRVDTMD 378


>gi|313835932|gb|EFS73646.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL037PA2]
 gi|314927225|gb|EFS91056.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL044PA1]
          Length = 391

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +GVV  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGVVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V + +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPQEAAEHAKAILGMDI-------KGHTVHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ G+   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGI---DDAKAREILTQA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPESEQDAIAPAVIKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAALVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V  + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVHSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G  ++ E    ++T +  +D+AA K
Sbjct: 341 KATKPLVVRLDGNAVAEGRTILEEFNHPLVTMVPTMDEAASK 382


>gi|293189082|ref|ZP_06607808.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces
           odontolyticus F0309]
 gi|292821927|gb|EFF80860.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces
           odontolyticus F0309]
          Length = 395

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/387 (34%), Positives = 216/387 (55%), Gaps = 33/387 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ + +++ VPV    + S+   A    + L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARQMFKEHGVPVLDYRLASTPEEAREGARELLADGASLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +          ILG  +        G  V  V +  GADI  E
Sbjct: 61  ----------GGVKLAHTADEAYEKAEAILGLDI-------KGHIVKKVMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE---DVASLC 174
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DP +G+ +E    +A   
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPAVGINAEVARRIAKEA 163

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
              E   +A      +   L+  + D+D +L+E+NPL+   +G +  +D K++ DDNA +
Sbjct: 164 GFDEATAEAI---APVLETLWTVYRDEDATLVEVNPLVSSPDGSVWAVDGKVTLDDNARF 220

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YG 290
           RH    EL DV+ +D RE  AK   L+Y+ L+G +G + NGAGL M+T+D++ +    +G
Sbjct: 221 RHPGHAELVDVAAQDPREAAAKAAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAMAGEEFG 280

Query: 291 G-APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           G  PANFLD+GGGA  + +A    II  D  V+ + +N+FGGI  CD + +GI+ A++ +
Sbjct: 281 GMKPANFLDIGGGASAEVMAKGLDIILGDEQVRSVFVNVFGGITACDQVARGIIGALETL 340

Query: 350 --KINIPLVMRLEGANVDIGNRLIAES 374
               + PLV+RL+G  V+ G  ++AE+
Sbjct: 341 GDAASKPLVVRLDGNKVEEGRAILAEA 367


>gi|328884532|emb|CCA57771.1| Succinyl-CoA ligase [Streptomyces venezuelae ATCC 10712]
          Length = 424

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 223/397 (56%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L  K+ VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 33  VDLFEYQARDLFAKHGVPVLAGEVIDTPEAARAATERLGGK-SVVKAQVKVGGRGKA--- 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + E   +I  E Y
Sbjct: 89  -------GGVKLAADADEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 134

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++   GVT E    +    + 
Sbjct: 135 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNANDGVTLEKAREIVAQAKF 194

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    ++   L+K F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R  + 
Sbjct: 195 PADVAEGVAEVLVTLWKTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPEH 254

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++      +GG  PA
Sbjct: 255 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 314

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 315 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLASKGE 374

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 375 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 411


>gi|302544604|ref|ZP_07296946.1| succinyl-CoA synthetase, beta subunit [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302462222|gb|EFL25315.1| succinyl-CoA synthetase, beta subunit [Streptomyces himastatinicus
           ATCC 53653]
          Length = 390

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/396 (34%), Positives = 217/396 (54%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI++  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVINTPEAAREVAERLGG-RAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPADAVEKANQILGMDI-------KGHTVHKVMLAQTADIKEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA+  P  + K+ +D + GVT E  A +    +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGVEIEVVAEQNPDALAKIPVDAIEGVTPEKAAEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L+  F  +D  L+E+NPL+   +G++  LD K++ D NA +R  +  
Sbjct: 163 AEIADQVADVLQQLWTVFIKEDALLVEVNPLVKTGDGKIIALDGKVTLDANAEFRQPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  +  E  AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELEDKAAANPLEAAAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGED 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++ PLV+RL+G N ++G +++ ++   ++  +D  D
Sbjct: 343 VSKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMD 378


>gi|328906125|gb|EGG25900.1| succinate-CoA ligase, beta subunit [Propionibacterium sp. P08]
          Length = 391

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +GVV  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGVVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V + +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPQEAAEHAKAILGMDI-------KGHTVHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ G+   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGI---DDAKAREILTQA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPESEQDAIAPAVIKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAALVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V  + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDGQVHSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G  ++ E    ++T +  +D+AA K
Sbjct: 341 KATKPLVVRLDGNAVAEGRTILEEFNHPLVTMVPTMDEAASK 382


>gi|327332324|gb|EGE74060.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL097PA1]
          Length = 391

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/402 (36%), Positives = 224/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL         ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSLAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|154509659|ref|ZP_02045301.1| hypothetical protein ACTODO_02192 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799293|gb|EDN81713.1| hypothetical protein ACTODO_02192 [Actinomyces odontolyticus ATCC
           17982]
          Length = 395

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 213/384 (55%), Gaps = 27/384 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKG 57
           M+++EYQA+ + +++ VPV    + S+   A    + L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARQMFKEHGVPVLDYRLASTPEEAREGARELLADGALLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +          ILG  +        G  V  V +  GADI  E
Sbjct: 61  ----------GGVKLAHTADEAYEKAEAILGLDI-------KGHIVKKVMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DP +G+ +E    +    
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPTVGIDAEVARHIAKEA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L+  + D+D +L+E+NPL+   +G +  +D K++ DDNA +RH 
Sbjct: 164 GFDEETAEAIAPVLETLWTVYRDEDATLVEVNPLVSSPDGSVWAVDGKVTLDDNARFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGG-A 292
              EL DV+ +D RE  AK   L+Y+ L+G +G + NGAGL M+T+D++ +    +GG  
Sbjct: 224 GHAELVDVAAQDPREAAAKAAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAMAGEEFGGMK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA  + +A    II  D  V+ + +N+FGGI  CD + +GI+ A++ +   
Sbjct: 284 PANFLDIGGGASAEVMAKGLDIILGDEQVRSVFVNVFGGITACDQVARGIIGALETLGDA 343

Query: 351 INIPLVMRLEGANVDIGNRLIAES 374
            + PLV+RL+G  V+ G  ++AE+
Sbjct: 344 ASKPLVVRLDGNKVEEGRAILAEA 367


>gi|303244550|ref|ZP_07330884.1| succinyl-CoA synthetase, beta subunit [Methanothermococcus
           okinawensis IH1]
 gi|302485098|gb|EFL48028.1| succinyl-CoA synthetase, beta subunit [Methanothermococcus
           okinawensis IH1]
          Length = 361

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/396 (34%), Positives = 219/396 (55%), Gaps = 38/396 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV +G + S+       I+ L  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKKYKIPVPEGFITSN------EIEKLNKPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    ++      I+E+L   +        G +V  V VE+   I +E YL
Sbjct: 51  -------GGVLFADTVNEANEKIKELLNKDI-------KGEKVEKVLVEEKLPIKKEYYL 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR       + ST+GG++IEE+AK  P+KI K  ++PL         ++    ++ 
Sbjct: 97  GITIDRAERKPVIMFSTEGGVEIEEIAKTNPEKIIKYHVNPLNEFLPYIARNILKDADIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LY  F D D  L+EINPL+I ++GR    D+ ++ DD+A YRH D  
Sbjct: 157 SSEISKVADIVYKLYNVFKDMDGMLVEINPLVITEDGRALAADAVLNVDDDAYYRH-DYT 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  + +++D  E        +Y+ LDG+IG + NGAGL +A+MD+IK YGG PA FLD+G
Sbjct: 216 QFEEFNKKDKLE-------FAYVELDGDIGVIGNGAGLTLASMDMIKEYGGNPACFLDIG 268

Query: 301 GGADQDKVAAAF-KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGA+++ V  A  K++  D  VKGI IN+  GI RCD + +GI+  +K+   N+   +R+
Sbjct: 269 GGANEETVKKALEKVLKKD--VKGIFINVLAGITRCDEVARGIVEVLKK-HPNVKFAVRM 325

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N + G R++ E+G+       ++ AA+K++  V
Sbjct: 326 MGTNEEEGRRILTENGIPF--EYSMEKAAKKLMEMV 359


>gi|313125863|ref|YP_004036133.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Halogeometricum
           borinquense DSM 11551]
 gi|312292228|gb|ADQ66688.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Halogeometricum
           borinquense DSM 11551]
          Length = 381

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/394 (34%), Positives = 211/394 (53%), Gaps = 21/394 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +  +PV +  + +SV     A++ +  P   +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKDIFAEAGIPVPESRLATSVDEVMEAVEEIGYPA-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +          +ILG  L        G  V  V VE G D   ELY+
Sbjct: 57  -------GGIKIATDEDEAREAAEDILGMDL-------KGYTVEKVLVEAGVDFENELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P+ I +  IDP  G+       +     + 
Sbjct: 103 GITMDRGEGKPVAMVSTEGGVNIEEVAEETPEAIAREHIDPAFGLHPYQARKVVYEAGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY  +  KD S +EINP++I  +  +   D+ ++ D +AL+RH D+ 
Sbjct: 163 HDVAGDVATILSTLYDLYESKDASDIEINPVMITSDREVVAADAVMNIDSDALFRHPDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D + ED  E +A  +   Y+ L GN+G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMEDEAAEDDLERKANDYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++VA A  ++ SD +V  ++ NIFGGI R D + KGI  A++   +I   +V+RL
Sbjct: 283 GGAKAERVANALDMVFSDENVDAVVFNIFGGITRGDEVAKGINEALESFDEIPKKVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
            G N + G  ++    + V     L+DA Q+ V 
Sbjct: 343 AGTNAEEGMEILNTDLVEVEKT--LEDAVQQAVE 374


>gi|50955504|ref|YP_062792.1| succinyl-CoA synthetase subunit beta [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|81390603|sp|Q6AD57|SUCC_LEIXX RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|50951986|gb|AAT89687.1| succinyl-CoA synthetase, beta chain [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 387

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 223/399 (55%), Gaps = 28/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  KY VPV  G+V  +     +A + L G + VVK+Q+  G        
Sbjct: 1   MDLYEYQARDLFEKYGVPVLPGIVADTPEEVRAAAEKLGG-VNVVKAQVKTG---GRGKV 56

Query: 61  ELPADSKGGVRVESSLKSVIS-DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                +K     E + K+++  DI+               G  V  V V  GA I RE Y
Sbjct: 57  GGVKVAKNPDEAEEAAKAILGLDIK---------------GHVVRRVMVSGGARIAREFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            S+L+DR +     + S +GGM+IE++A + P+ + ++ +DP+ GV +     +      
Sbjct: 102 FSVLLDRANRSYLSLTSVEGGMEIEQLAVEKPEALARIGVDPIAGVDTTKATEIARAAGF 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+F  LY  +  +D +L+E+NPL++ + G +  LD K++ D+NA +RH + 
Sbjct: 162 PEELVSKVADVFVKLYDVYKGEDATLVEVNPLVLTEEGEVIALDGKVTLDENAGFRHPEH 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D +  D  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 222 EELEDKAAADPLEAKAKEADLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGERHKGVKPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD +  GI+ A++ +    N
Sbjct: 282 NFLDIGGGASAEVMAAGLDVILNDPQVKSVFVNVFGGITACDAVANGIVKALEILGGDAN 341

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
            PLV+RL+G NV+ G R++ ++   ++T A+ +D+ A K
Sbjct: 342 KPLVVRLDGNNVEEGRRILTDANHPLVTLALTMDEGADK 380


>gi|256824634|ref|YP_003148594.1| succinyl-CoA synthetase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256688027|gb|ACV05829.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Kytococcus
           sedentarius DSM 20547]
          Length = 394

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 221/400 (55%), Gaps = 34/400 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G V ++   A +A + +    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDMFEKHGVPVLAGEVATTPEEARAAAERIGQKSGGVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  S +        ILG  +        G  V+ V +  GA I  E
Sbjct: 61  ----------GGVKVVKSPEEAQEAAEAILGMDI-------KGHTVHTVMIAQGAKIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DRT+     + S +GG++IE++A + P+ + ++ IDP +G+   D A   +++
Sbjct: 104 YYFSILLDRTNRSYLAMCSKEGGVEIEQLAVERPEALARIEIDPSVGL---DDAKAAEIV 160

Query: 178 ELQG--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           E  G   ++ +    F  LY  + ++D SL+E+NPL+  ++G +  LD K++ D+N+ +R
Sbjct: 161 EAAGFTDSKDELAKTFKTLYTVYTEEDASLVEVNPLVKTEDGEIIALDGKVTLDENSDFR 220

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG----- 290
                +L D    D  E +AK   L+Y+ LDGN+G + NGAGL M+T+D++   G     
Sbjct: 221 QPHHADLEDKEAADPLEAKAKAKGLNYVKLDGNVGIIGNGAGLVMSTLDVVAYAGEDKTG 280

Query: 291 --GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ 
Sbjct: 281 GKAKPANFLDIGGGASAQVMADGLDVILGDEQVKSVFVNVFGGITACDAVANGIVQALEM 340

Query: 349 V--KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +      PLV+RL+G NV+ G +++A++   +++  D  D
Sbjct: 341 LGDDATKPLVVRLDGNNVEEGRKILADANHPLVSIADTMD 380


>gi|290956175|ref|YP_003487357.1| succinyl-coa synthetase subunit beta [Streptomyces scabiei 87.22]
 gi|260645701|emb|CBG68792.1| succinyl-coa synthetase beta chain [Streptomyces scabiei 87.22]
          Length = 376

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/398 (34%), Positives = 217/398 (54%), Gaps = 27/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QA+AL  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQARALFEEHGIAVPRAEVTDSPKEAREIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG+ +        G  V  V + +   I  E Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGTDI-------KGHTVRTVMIAEPVAIESEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS +GGMDIEEVA   P+ + ++ +DP  GVTS   + + +   L 
Sbjct: 103 SYVLDRAAGGFLAIASAEGGMDIEEVAATRPEAVARIPVDPAEGVTSAKASEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q+     D+   L++    +D  L+E+NPL+    GR+  LD K++ DDNA +R     
Sbjct: 163 PQSV----DVLMRLWQVLTREDALLVEVNPLVRTAQGRILALDGKVTLDDNAGFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +    + +D  E  A    L+Y+ L+G +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 D-EGFAHDDPLEAAAAAKGLNYVKLEGEVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK +L+N+FGGI  CD + +GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASARIMADGLSVILSDPAVKSVLVNVFGGITACDAVAEGIVRALDSVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQK---IVHA 394
           G N   G  ++      ++  A  +D AA++   + HA
Sbjct: 338 GNNAVRGRAILDTRAHPLVHQATTMDGAARRAADLAHA 375


>gi|222480617|ref|YP_002566854.1| succinyl-CoA synthetase, beta subunit [Halorubrum lacusprofundi
           ATCC 49239]
 gi|254778441|sp|B9LRR0|SUCC_HALLT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|222453519|gb|ACM57784.1| succinyl-CoA synthetase, beta subunit [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 381

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 213/393 (54%), Gaps = 21/393 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +     +PV    + ++V  A  A+  +  P   +K+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKTIFADAGIPVPDSRLATTVDEALDAVDEIGYPA-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +          EILG  L        G  V+ + VE G D + ELY+
Sbjct: 57  -------GGIKIATDRDEAEQYAEEILGMDL-------KGYTVDQILVEQGVDFVDELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  +DP  G+       +     + 
Sbjct: 103 GVTMDRGEGQPVLMVSTEGGVNIEEVAEENPDAIAREHVDPAFGLHPYQARKVVYEAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +D   +   LY  + + D S +E+NP++I  +  +   D+ ++ D++AL+RH D+ 
Sbjct: 163 ADVALDVASILTTLYDLYEENDASEIEVNPVMITSDRDVIAADAVMNIDEDALFRHPDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + S ED  E +A ++   Y+ L GN+G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMAEESYEDDLERKAGEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYYGGKPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++V  A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I   +V+RL
Sbjct: 283 GGAKAERVTKALDMVFSDENVDAVVFNIFGGITRGDEVAKGINEALEQFDEIPKKVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            G N + G  ++    + V     L+DA Q+ V
Sbjct: 343 AGTNAEEGMEILNTDLVEVEET--LEDAVQRAV 373


>gi|314970658|gb|EFT14756.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL037PA3]
          Length = 391

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 222/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +GVV  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGVVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V + +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPQEAAEHAKAILGMDI-------KGHTVHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ G+   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGI---DDAKAREILTQA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D  L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPESEQDAIAPAVIKLWETYRDEDAPLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAALVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V  + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVHSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G  ++ E    ++T +  +D+AA K
Sbjct: 341 KATKPLVVRLDGNAVAEGRTILEEFNHPLVTMVPTMDEAASK 382


>gi|302555347|ref|ZP_07307689.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472965|gb|EFL36058.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
          Length = 376

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 202/373 (54%), Gaps = 23/373 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFEEHGILVPRAEVTDSPKEARGIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVRIAADPAAAELTARQILGMDI-------KGHTVGKVMLAQPVDIEAEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS +GGM+IEEVA   P+ + ++ +DP  GVTS     + +   L 
Sbjct: 103 SYVLDRAAGRFLAIASAEGGMEIEEVAASRPEAVARVPVDPAQGVTSAKAGEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q+     D+   L++    +D  L+E+NPL+    G+L  LD K++ DDNA +R +   
Sbjct: 163 PQSV----DVLVRLWEILVREDALLVEVNPLVRTGQGQLLALDGKVTLDDNARFRQVRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D   +D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 A-EDTGHDDPLEAAAAAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK + +N+FGGI  CD +  GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASARIMADGLSVILSDPAVKSVFVNVFGGITACDAVADGIVQALDTVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAE 373
           G N   G  ++ E
Sbjct: 338 GNNAPRGRAILDE 350


>gi|76802812|ref|YP_330907.1| succinyl-CoA synthetase subunit beta [Natronomonas pharaonis DSM
           2160]
 gi|121717446|sp|Q3INN3|SUCC_NATPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|76558677|emb|CAI50269.1| succinate--CoA ligase (ADP-forming), beta subunit [Natronomonas
           pharaonis DSM 2160]
          Length = 380

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 213/393 (54%), Gaps = 21/393 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +PV +  + S+V  A  A   +  P+  +K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKGVFADAGIPVPESTLASTVDEAVEAADDIGYPV-AIKAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +         EILG  L        G  V+ V VE   D   ELY+
Sbjct: 57  -------GGIKLVENADEAREAADEILGMDL-------KGLHVDRVLVEAAVDFTDELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +G    + ST+GG++IEEVA++ P  I +  IDP  G+             + 
Sbjct: 103 GVTMDRAAGKPVAMVSTRGGVNIEEVAEEDPDAIVREHIDPAFGMHPFQARKAAFEAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY+ + DKD + +E+NPL++  +  +   D+ ++ D++AL+RH D++
Sbjct: 163 RAVANDVASILTQLYELWADKDATEIEVNPLMVTDDDEVIAADAVMNIDEDALFRHPDLE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + +  D  E +A ++   Y+ L GN G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMEEEAAGDELEAKANEYGFDYVRLSGNTGIIGNGAGLVMTTLDLVDHYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++VA A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I  P+V+RL
Sbjct: 283 GGAKAERVANALDMVFSDDNVDSVVFNIFGGITRGDEVAKGINEALEQFDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            G N + G  ++    + V     L+DA Q+ V
Sbjct: 343 AGTNAEEGMEILNTDLVTVEKT--LEDAVQRAV 373


>gi|312142573|ref|YP_003994019.1| succinyl-CoA synthetase, beta subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311903224|gb|ADQ13665.1| succinyl-CoA synthetase, beta subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 393

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/414 (34%), Positives = 227/414 (54%), Gaps = 38/414 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA---------------IKTLPGPLYVV 45
           M + EY++  L   YN+P  KGVVI S+   ++                I+  P    VV
Sbjct: 1   MKLLEYKSMELFYDYNIPSNKGVVIDSLADLDNTQQDDEPTRGSNVGAEIENYP---VVV 57

Query: 46  KSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC 105
           K+Q+  GGRGK           GG++   + + V    +++LGS +        G  +  
Sbjct: 58  KAQVQTGGRGKA----------GGIKFADNAEEVKQISKDLLGSEI-------KGLEIKK 100

Query: 106 VYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           ++V D  D+ +E YLS+ +DR +     I ST+GG+DIEE A + P+KI K+ I+P++G+
Sbjct: 101 LFVVDMIDVKKEWYLSITLDRKTKTPLLIFSTEGGVDIEETAHETPEKIAKIPINPMMGI 160

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            +  +  L +  ++  +   +  +L  NLYK F + D  L EINPL+I +N  L  LD K
Sbjct: 161 KAYMLRYLINYFDVDPKYLKELTELVENLYKLFREYDCLLAEINPLVITENEELLALDGK 220

Query: 226 ISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATM 283
           I  DDN+L+RH DI + RD   ED++ IEA++++  YI +   GNIG + NG+G+ M++M
Sbjct: 221 IDIDDNSLFRHDDILKFRDELTEDAKVIEAREYDFLYIPIRDTGNIGVISNGSGMIMSSM 280

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           D+I   G      LD+GGGA  ++V  A KI+ S+  V+ +LINIFGGI RCD +  G+ 
Sbjct: 281 DLISQRGMEVTCALDLGGGATAERVKEAIKIVLSNDDVEVLLINIFGGITRCDEIANGLK 340

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            A   V  +  +++R+EG N + G  +I      V++A  + +  +K+     G
Sbjct: 341 MAADAVG-DKKVIIRVEGTNKEAGLDIIHGMKDTVVSADSILEGVEKLYEHFSG 393


>gi|297619455|ref|YP_003707560.1| succinyl-CoA synthetase subunit beta [Methanococcus voltae A3]
 gi|297378432|gb|ADI36587.1| succinyl-CoA synthetase, beta subunit [Methanococcus voltae A3]
          Length = 363

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/410 (33%), Positives = 223/410 (54%), Gaps = 63/410 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AKA+ + Y +PV +  +       +  ++ +  P+ VVK+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKAIFKSYGIPVPESEI------TDKKVENIDKPV-VVKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   ++ +     I E+L   +        G +V  V +ED  +I +E Y+
Sbjct: 51  -------GGILFANNTQEANEKIEELLNKEI-------KGEKVEKVLLEDMINIEKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID------PLI--------GVT 166
            +++DR +     + ST+GG+DIE+VA+  P+KI K  +D      P +        G+ 
Sbjct: 97  GIVIDRNNKQAVVMFSTEGGVDIEQVAEKTPEKIIKYYVDFDKEFQPYMARNMLIKAGIP 156

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
           S +++ +  ++                LYKAF D D SL+EINPL+I K   +   D+  
Sbjct: 157 SPEISKIATII--------------SKLYKAFEDMDGSLIEINPLVITKEANVIAADAVF 202

Query: 227 SFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII 286
           + DD+A Y+H D ++  + S++D  E        +Y+ LDG+I  + NGAGL +A+MDI+
Sbjct: 203 NLDDDAYYKH-DYKQFEEFSKQDKSE-------FAYVDLDGDIAVIGNGAGLTLASMDIV 254

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
           K  GG P+ FLDVGGG++ + V  A +   S   VKG+ INI GGI RCD + KGI+   
Sbjct: 255 KNSGGEPSCFLDVGGGSNSETVQKALRKALSKDGVKGVFINILGGITRCDEVSKGIVEVY 314

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           K+   N+   +RL G N D G R++ E+G++  T   +D+AA+K++  ++
Sbjct: 315 KDYP-NVKFAVRLMGTNEDEGRRILNENGISFETT--MDNAAKKLMEIIQ 361


>gi|282855097|ref|ZP_06264429.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J139]
 gi|282581685|gb|EFB87070.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J139]
 gi|315090400|gb|EFT62376.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA4]
          Length = 391

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPNSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DRAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|314982169|gb|EFT26262.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA3]
          Length = 391

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPNSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DRAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKDALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|302557241|ref|ZP_07309583.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
 gi|302474859|gb|EFL37952.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
          Length = 376

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/371 (35%), Positives = 204/371 (54%), Gaps = 23/371 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFAEHGIVVPRAEVTGSSREARDIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVRLAADPAAAELTARQILGMDI-------KGHTVGTVMLAQPVDIAEEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DRT+G    IAS +GGMDIEEVA   P+ + ++ +DP  GVT    A + +   L 
Sbjct: 103 SYVLDRTAGRFLAIASAEGGMDIEEVAATRPEAVARVPVDPAEGVTPATAARIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L++    +D  L+E+NPL+  ++GR+  LD K++ DDNA +R     
Sbjct: 163 ARTV----DVLVRLWQVLVREDALLVEVNPLVRTRDGRIMALDGKVTLDDNARFRQERWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + +D +  D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 D-QDDTHTDPLEAAAAAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD SV+ + +N+FGGI  CD +  GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASAQVMADGLSVILSDPSVRSVFVNVFGGITACDAVADGIVRALDTVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLI 371
           G N   G  ++
Sbjct: 338 GNNAARGRAVL 348


>gi|50843215|ref|YP_056442.1| succinyl-CoA synthetase subunit beta [Propionibacterium acnes
           KPA171202]
 gi|81611260|sp|Q6A6Y0|SUCC_PROAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|50840817|gb|AAT83484.1| succinyl-CoA synthetase beta subunit [Propionibacterium acnes
           KPA171202]
          Length = 391

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSAAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNYPLVTMVSTMDEAASK 382


>gi|111022539|ref|YP_705511.1| succinyl-CoA synthetase subunit beta [Rhodococcus jostii RHA1]
 gi|123144369|sp|Q0S533|SUCC_RHOSR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110822069|gb|ABG97353.1| succinate--CoA ligase beta subunit [Rhodococcus jostii RHA1]
          Length = 389

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 226/398 (56%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHEVPTSAGRVTDTVAGAREIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +   +  ++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSADADAAQANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F ++D  L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFINEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 AFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K
Sbjct: 343 PLVVRLDGNNVEEGRRILAEAAHPLVTVVGTMDEAADK 380


>gi|256397087|ref|YP_003118651.1| succinyl-CoA synthetase subunit beta [Catenulispora acidiphila DSM
           44928]
 gi|256363313|gb|ACU76810.1| succinyl-CoA synthetase, beta subunit [Catenulispora acidiphila DSM
           44928]
          Length = 392

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 217/402 (53%), Gaps = 35/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG--- 57
           M++ EYQA+ +  K+ VPV  G V  +   AE+A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDIFAKHGVPVLGGEVAETPEQAEAAAEKLGGRV-VVKAQVKVGGRGKAGGV 59

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +  E PAD+K     E +   +  DI+               G  V+ V +   A+I  E
Sbjct: 60  KLAEGPADAK-----EKAAAILGMDIK---------------GHTVHKVMLAQTAEIEAE 99

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI---GVTSEDVASLC 174
            Y+S L+DR++     +AS +GGM+IEE+A   P+ + K+ +D      G++ E    + 
Sbjct: 100 YYVSFLLDRSNRTFLAMASVEGGMEIEEIAVSKPEALAKVPVDAAAYHEGLSQEKADEIV 159

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
                              L+  F  +D +L+E+NPL+  K G++  LD K+S D+NA +
Sbjct: 160 KAANFPHHVADQVAATLVTLWDVFVKEDATLVEVNPLVKTKAGKIVALDGKVSLDENASF 219

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH D + L D +  D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G    
Sbjct: 220 RHEDHEALEDKASADPLEAKAKAKHLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHG 279

Query: 292 --APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
              PANFLD+GGGA  + +A    II +D +VK + +N+FGGI  CD +  GI+ A K +
Sbjct: 280 NVKPANFLDIGGGASAEVMANGLDIILNDPAVKSVFVNVFGGITACDAVANGIVEAFKLL 339

Query: 350 KINI---PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
                  PLV+RL+G N ++G +++ ++ L  +  +D  D A
Sbjct: 340 GAEAGSKPLVVRLDGNNAELGRQILVDAKLPGVEQVDTMDGA 381


>gi|315106180|gb|EFT78156.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL030PA1]
          Length = 391

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNYPLVTMVSTMDEAASK 382


>gi|311896479|dbj|BAJ28887.1| putative succinyl-CoA synthetase beta chain [Kitasatospora setae
           KM-6054]
          Length = 390

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 28/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +   A +  +   G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLDGDVIETAADAAAIAERFGGR-AVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S  + V++    ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPQDVVAKAEAILGMDI-------KGHTVHKVMLAQTADIQEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA++ P  + K+ +D   GVT+E  A +    +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGVEIEVVAEENPDALAKIPVDANEGVTAEKAAEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  D +
Sbjct: 163 AEIADQVADVLQKLWVVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENAEFRQPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  +  E  AK   L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKGLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +II  D+ VK + +N+FGGI  CD +  GI+ A+     K   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDTDVKSVFVNVFGGITACDAVANGIVQALALLEGKGEA 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           +  PLV+RL+G N ++G +++ ++   ++  +D  D A
Sbjct: 343 VTKPLVVRLDGNNAELGRQILTDANHPLVEQVDTMDGA 380


>gi|314917768|gb|EFS81599.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL050PA1]
          Length = 391

 Score =  225 bits (574), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGPPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|108801291|ref|YP_641488.1| succinyl-CoA synthetase subunit beta [Mycobacterium sp. MCS]
 gi|119870442|ref|YP_940394.1| succinyl-CoA synthetase subunit beta [Mycobacterium sp. KMS]
 gi|126437272|ref|YP_001072963.1| succinyl-CoA synthetase subunit beta [Mycobacterium sp. JLS]
 gi|122976542|sp|Q1B3V2|SUCC_MYCSS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081752|sp|A3Q5P5|SUCC_MYCSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081753|sp|A1UL96|SUCC_MYCSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|108771710|gb|ABG10432.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. MCS]
 gi|119696531|gb|ABL93604.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. KMS]
 gi|126237072|gb|ABO00473.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. JLS]
          Length = 387

 Score =  225 bits (574), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 220/398 (55%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++  + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEDAKAIAEEIGKPV-MVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATADDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GG++IEEVA   P ++ ++ +D   GV       + +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGVEIEEVAATKPDRLARIPVDATKGVDEAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +RH +  
Sbjct: 163 AEVLDAAAVTIAKLWEVFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII-----KLYGGAPAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++     K  G  PAN
Sbjct: 223 EFEDRDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDSQVKSVFVNVFGGITACDAVANGIVKALEILGEEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
           PLV+RL+G  V+ G +++A++    V+ A  +D+ A K
Sbjct: 343 PLVVRLDGNRVEEGRKILADANHPLVVLAQTMDEGADK 380


>gi|289427664|ref|ZP_06429376.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J165]
 gi|295131280|ref|YP_003581943.1| succinate-CoA ligase [ADP-forming], beta subunit [Propionibacterium
           acnes SK137]
 gi|289159155|gb|EFD07347.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J165]
 gi|291376177|gb|ADE00032.1| succinate-CoA ligase [ADP-forming], beta subunit [Propionibacterium
           acnes SK137]
 gi|313763126|gb|EFS34490.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL013PA1]
 gi|313773163|gb|EFS39129.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL074PA1]
 gi|313810355|gb|EFS48069.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL083PA1]
 gi|313812189|gb|EFS49903.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL025PA1]
 gi|313816466|gb|EFS54180.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL059PA1]
 gi|313817908|gb|EFS55622.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL046PA2]
 gi|313819820|gb|EFS57534.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL036PA1]
 gi|313823310|gb|EFS61024.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL036PA2]
 gi|313824785|gb|EFS62499.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL063PA1]
 gi|313828274|gb|EFS65988.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL063PA2]
 gi|313830206|gb|EFS67920.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL007PA1]
 gi|313832959|gb|EFS70673.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL056PA1]
 gi|314914444|gb|EFS78275.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA4]
 gi|314919506|gb|EFS83337.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL050PA3]
 gi|314925814|gb|EFS89645.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL036PA3]
 gi|314930098|gb|EFS93929.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL067PA1]
 gi|314957101|gb|EFT01206.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL027PA1]
 gi|314957691|gb|EFT01794.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL002PA1]
 gi|314960757|gb|EFT04858.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL002PA2]
 gi|314972986|gb|EFT17082.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL053PA1]
 gi|314979800|gb|EFT23894.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL072PA2]
 gi|314984813|gb|EFT28905.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA1]
 gi|314986166|gb|EFT30258.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA2]
 gi|314988778|gb|EFT32869.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA3]
 gi|315079960|gb|EFT51936.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL078PA1]
 gi|315083288|gb|EFT55264.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL027PA2]
 gi|315086939|gb|EFT58915.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL002PA3]
 gi|315090030|gb|EFT62006.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL072PA1]
 gi|315096647|gb|EFT68623.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL038PA1]
 gi|315097876|gb|EFT69852.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL059PA2]
 gi|315100640|gb|EFT72616.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL046PA1]
 gi|315109267|gb|EFT81243.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL030PA2]
 gi|327325063|gb|EGE66869.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL096PA3]
 gi|327325310|gb|EGE67115.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL096PA2]
 gi|327443825|gb|EGE90479.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL043PA1]
 gi|327449137|gb|EGE95791.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL043PA2]
 gi|327449261|gb|EGE95915.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL013PA2]
 gi|327451319|gb|EGE97973.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL087PA3]
 gi|327451775|gb|EGE98429.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL083PA2]
 gi|328752260|gb|EGF65876.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL087PA1]
 gi|328755355|gb|EGF68971.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL025PA2]
 gi|328756394|gb|EGF70010.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL020PA1]
 gi|328761100|gb|EGF74649.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL099PA1]
          Length = 391

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|30268174|emb|CAB45708.2| hypothetical protein [Homo sapiens]
          Length = 211

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/189 (57%), Positives = 147/189 (77%)

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI
Sbjct: 1   TMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYI 60

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD  V  
Sbjct: 61  GLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLA 120

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+SGL ++   D
Sbjct: 121 ILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDD 180

Query: 384 LDDAAQKIV 392
           LD+AA+ +V
Sbjct: 181 LDEAARMVV 189


>gi|239943707|ref|ZP_04695644.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           15998]
 gi|239990157|ref|ZP_04710821.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           11379]
 gi|291447169|ref|ZP_06586559.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           15998]
 gi|291350116|gb|EFE77020.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           15998]
          Length = 393

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 217/397 (54%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATEKLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + E   +I  E Y
Sbjct: 57  -------GGVKLAADADEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ +D   GV       +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVDSNSGVDIVKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R    
Sbjct: 163 PAEVAEKVAEVLVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGDVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALALLESKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           K+  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|313793368|gb|EFS41426.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA1]
 gi|313800988|gb|EFS42256.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA2]
 gi|313838058|gb|EFS75772.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL086PA1]
 gi|314963432|gb|EFT07532.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL082PA1]
 gi|315077281|gb|EFT49343.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL053PA2]
 gi|327451704|gb|EGE98358.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL092PA1]
          Length = 391

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA    +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAKIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|289425025|ref|ZP_06426804.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes SK187]
 gi|289154724|gb|EFD03410.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes SK187]
          Length = 391

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAGEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|313808728|gb|EFS47182.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL087PA2]
          Length = 391

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ + V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKMMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|320009001|gb|ADW03851.1| succinyl-CoA synthetase, beta subunit [Streptomyces flavogriseus
           ATCC 33331]
          Length = 393

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 220/397 (55%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + E   +I  E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++ + GV  E    +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGVDIEKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      +    L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R    
Sbjct: 163 PAEVAEGVAEAMVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ L+G +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKTKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|302348871|ref|YP_003816509.1| Succinyl-CoA synthetase beta chain [Acidilobus saccharovorans
           345-15]
 gi|302329283|gb|ADL19478.1| Succinyl-CoA synthetase beta chain [Acidilobus saccharovorans
           345-15]
          Length = 382

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 215/382 (56%), Gaps = 24/382 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT--LPGPLYVVKSQIHAGGRGKGR 58
           + + EY+AK ++RKY +   KGVV+        AI++  L  PL  VK+Q+   GRGK  
Sbjct: 5   VKLFEYEAKEIIRKYGIETPKGVVVREGDDIRKAIESSGLTPPL-AVKAQVLVAGRGKA- 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GG+++ +++   +S  +++  + +        G + + + +E       EL
Sbjct: 63  ---------GGIKLVNNVDEAVSVSQQLFKTPI-------KGIKPSILLIEQAIKHDAEL 106

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y  +++DR       + S  GGMD+EEVA+++P+ I K  +DP  G+ + +   L   L 
Sbjct: 107 YAGIVLDRAERKPLVLVSKYGGMDLEEVAREHPEAIIKYYVDPYKGLRNYEARILGKQLG 166

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L G+A     +    LY+AF D D  L E NPL ++ + ++  LD +I  DDN+L+RH +
Sbjct: 167 LTGKALSSFENFLQALYRAFMDYDAELAESNPLALLPD-KVLPLDLRIIIDDNSLFRHTE 225

Query: 239 I--QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E   + E   REI A++ +L+Y+ LDG++G + NGAGL M TMD++  +G  PA+F
Sbjct: 226 YAATEKERLGELSEREIAAREKDLAYVELDGDVGVIGNGAGLTMTTMDLVYEFGMKPADF 285

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI-PL 355
           LDVGGGA+ + +  A + + SD  VK + INIFGGI R D + +GI+ A+K++     PL
Sbjct: 286 LDVGGGAEAEHIRDAVEFVMSDPKVKKVFINIFGGITRADEVARGIVMALKDLGNKAKPL 345

Query: 356 VMRLEGANVDIGNRLIAESGLN 377
           V+RL G N + G  ++ E G+ 
Sbjct: 346 VVRLTGTNEEQGREILKEVGIT 367


>gi|148530002|gb|ABQ82207.1| succinyl-CoA synthetase beta subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 203

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 109/203 (53%), Positives = 146/203 (71%)

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
           AS  GGM IE+VA    ++I K  IDP  G++     +L   L+L G++      +    
Sbjct: 1   ASQDGGMAIEDVAAATAERILKEPIDPATGLSDYQARTLAARLDLHGRSIRAFTTVLRAA 60

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           Y AF   D +++EINPL++ ++G L  LD+K+SFDDNAL+RH +++ELRD +EED RE E
Sbjct: 61  YDAFVALDAAIVEINPLVVTRSGDLLALDAKMSFDDNALFRHPELEELRDENEEDPRERE 120

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A +H L+Y+ LDG IGCMVNGAGLAMATMDIIK+ G  PANFLDVGGGA +++VAAAF+I
Sbjct: 121 AARHGLAYVGLDGTIGCMVNGAGLAMATMDIIKMEGEEPANFLDVGGGATRERVAAAFRI 180

Query: 315 ITSDSSVKGILINIFGGIMRCDV 337
           + +D  V+ IL+NIF GIMRCD+
Sbjct: 181 LLADRKVRRILVNIFRGIMRCDI 203


>gi|307330698|ref|ZP_07609836.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
 gi|306883677|gb|EFN14725.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
          Length = 397

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 218/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 8   VDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREVAERLGG-RAVVKAQVKVGGRGKA--- 63

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 64  -------GGVKLASDPADAVEKAGQILGMDI-------KGHTVHKVMLAQTADIKEEYYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA+  P+ + K+ +D + GVT E  A +    +  
Sbjct: 110 SFLLDRTNRTFLAMASVEGGVEIEVVAEQNPEALAKIPVDAIEGVTQEKAAEIVAAAKFP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L+  F  +D  L+E+NPL+   +G++  LD K+S D+NA +R  + +
Sbjct: 170 AEIADQVVEVLQKLWVVFIKEDALLVEVNPLVKADDGKIIALDGKVSLDENAAFRQPEHE 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 230 ALEDKAAANPLEAAAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 289

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 290 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGED 349

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           ++ PLV+RL+G N ++G +++ ++   ++  +D  D
Sbjct: 350 VSKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMD 385


>gi|169236260|ref|YP_001689460.1| succinyl-CoA synthetase subunit beta [Halobacterium salinarum R1]
 gi|21264048|sp|Q9HPP1|SUCC_HALSA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734957|sp|B0R5U5|SUCC_HALS3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167727326|emb|CAP14112.1| succinate--CoA ligase (ADP-forming) beta subunit [Halobacterium
           salinarum R1]
          Length = 382

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 199/372 (53%), Gaps = 19/372 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P  +  + +SV  A      L  P+  VK+Q+H GGRGK    
Sbjct: 1   MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYPV-AVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +          ILG  L        G  V+ V VE+  D   ELY+
Sbjct: 57  -------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+ G    + S +GG+DIE VA++ P+ I +  +DP  G+ +    +      ++
Sbjct: 103 GVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   +Y  + D D + +EINP+++     +   D+ +  D++AL+R     
Sbjct: 163 QDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQPAFA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ + + ED  E +A ++   Y+ LDGN G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 DMEEDAAEDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTTLDLVDYYGGQPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  D+VA A  ++ SD +V  ++ NIFGGI R D + KGI SA+++  +I  P+V+RL
Sbjct: 283 GGAKADRVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGINSALEQFDEIPTPVVVRL 342

Query: 360 EGANVDIGNRLI 371
            G N   G  ++
Sbjct: 343 AGTNAAEGREIL 354


>gi|238060995|ref|ZP_04605704.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. ATCC
           39149]
 gi|237882806|gb|EEP71634.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. ATCC
           39149]
          Length = 392

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 209/381 (54%), Gaps = 28/381 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVANTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++       ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGTDETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P K+ K  ID + GV       +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPDKVVKAPIDAVTGVDEAKAREIVTAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L++AF  +D +L+E+NPL    +G+L +LD+K++ D+NA +RH D +
Sbjct: 163 AEVADQVVEVAVGLWQAFVAEDATLVEVNPLAKTGDGKLLLLDAKVTLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQAAVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A   +I+ SD SV+ + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPSVRSVFVNVFGGITACDEVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLI 371
           +  PLV+RL+G N + G  ++
Sbjct: 343 VAKPLVVRLDGNNAEAGRAIL 363


>gi|314975497|gb|EFT19592.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL045PA1]
          Length = 399

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 223/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 9   VDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 65

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 66  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 111

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 112 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 168

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 169 GFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQP 228

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 229 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSP 288

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 289 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 348

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 349 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 390


>gi|315103905|gb|EFT75881.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL050PA2]
          Length = 391

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L + + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLSETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQS 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|296118631|ref|ZP_06837209.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968530|gb|EFG81777.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 397

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 228/405 (56%), Gaps = 35/405 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K++VPV +G+V +S   AE A + L   + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHDVPVLRGIVATSPTQAEEAAEKLGTDVVVVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         +ILG   I   T      V  V + +GADI  E Y 
Sbjct: 58  -------GGVKLAKSPAEAAQAADDILGLK-IKDHT------VRRVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS---EDVASLCDML 177
           S+L+DRT      + S +GG++IE +A + P+ + +    PL G+T+    ++A+     
Sbjct: 104 SILLDRTKRRYLVMLSKEGGVEIETLAVERPEALVRRSFSPLDGMTTTLAREIATEAGFS 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           E      +    +F  LY  + ++D +L+E+NPL+   +G +  LD K+S D+NA +RH 
Sbjct: 164 EEDTDKLVP---VFKKLYDTYEEEDATLVEVNPLVKTSSGDIVALDGKVSLDENAGFRHP 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           +  EL D   +D  E++A++  L+Y+ LDG++G + NGAGL M+T+D++   G       
Sbjct: 221 EHAELEDHYAQDPLELKAQKMGLNYVKLDGSVGVIGNGAGLVMSTLDVVAYAGEDLASQP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK---- 347
            PANFLD+GGGA+ + +A   ++I  D  VK + +N+FGGI  CD + KGI+ A +    
Sbjct: 281 KPANFLDIGGGANAEVMANGLEVILGDPQVKSVFVNVFGGITACDEVAKGIVQAFRILES 340

Query: 348 -EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            E++   PLV+RL+G N D+G  ++ ++ L  +  +   D A ++
Sbjct: 341 EEIEPK-PLVVRLDGNNADLGCSILKDADLPKLRQVGTMDEAARV 384


>gi|170782916|ref|YP_001711250.1| succinyl-CoA synthetase subunit beta [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157486|emb|CAQ02676.1| succinyl-CoA synthetase beta chain [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 390

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/389 (34%), Positives = 214/389 (55%), Gaps = 25/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EYQA+ L   Y VPV  G+V  +     +A + L G + VVK+Q+  GGRGK    
Sbjct: 4   VDLFEYQARDLFESYGVPVLPGIVADTAEEVRAAAEKLGGTV-VVKAQVKTGGRGKA--- 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S  +       ILG  +        G  V+ V V  GA I +E Y 
Sbjct: 60  -------GGVKVAQSAAAAYEAAEGILGLDI-------KGHTVHRVMVAAGARIAQEFYF 105

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       +AS +GGM+IEE+A   P+ + ++ IDP+ G+ +     +       
Sbjct: 106 SILLDRAERSYLCLASYEGGMEIEELAVTRPEALARIEIDPVAGIDAAKAEEIARAASFP 165

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  + D+D +L+E+NPL++ ++G    LD K++ D+NA +RH    
Sbjct: 166 EELIAKVAPVFERLWWVYRDEDATLVEVNPLVLTESGDSIALDGKVTLDENAGFRHEGHA 225

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  D  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 226 ALEDAAAADPLEAKAKESDLNYVKLDGQVGIIGNGAGLVMSTLDVVSYAGEQHGGVRPAN 285

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  V  + +N+FGGI  CD +  GI+ A+ ++      
Sbjct: 286 FLDIGGGASAEVMAAGLDVILGDEQVTSVFVNVFGGITSCDAVANGIVGALDKLGDAATK 345

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI 382
           PLV+RL+G NV+ G R++ E    ++T +
Sbjct: 346 PLVVRLDGNNVEEGRRILEERAHPLVTVV 374


>gi|297571846|ref|YP_003697620.1| succinyl-CoA synthetase subunit beta [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296932193|gb|ADH93001.1| succinyl-CoA synthetase, beta subunit [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 390

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/392 (34%), Positives = 222/392 (56%), Gaps = 32/392 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           M+++EYQA+ L  K+ VPV  G+V ++   AE A + L     L VVK+Q+  GGRGK  
Sbjct: 1   MDLYEYQARELFAKHGVPVVNGIVATTPEEAEQAARQLLEATNLVVVKAQVKTGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  + +       +ILG  +        G  V+ V +  GADI  E 
Sbjct: 60  ---------GGVKLARTPEEAKERAGDILGMDI-------KGHTVHRVLIASGADITEEY 103

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+L+DR+      + S +GGM+IE++A + P+ + K+ ++P +G+T E VA   ++L 
Sbjct: 104 YFSILLDRSERRYLAMCSKEGGMEIEQLAVERPEALAKVPVNPNVGIT-EAVAR--EILT 160

Query: 179 LQGQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
             G A  +   + P    L+  +  +D +L+E+NPL+   +G +  +D K++ DDNA  R
Sbjct: 161 EAGFAPEEHDAIVPVLCRLWDVYTQEDATLVEVNPLVKTADGSIIAVDGKVTLDDNARIR 220

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKL----YG 290
           H +  +  D   E+  E  AK   L+Y+ LDG  +G + NGAGL M+T+D++      YG
Sbjct: 221 HPEHAQFVDKQTENPLEARAKSLGLNYVKLDGGQVGIIGNGAGLVMSTLDVVAYAGEEYG 280

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV- 349
             PANFLD+GGGA+ D ++    +I +D  V+ + +N+FGGI  CD + KGI++A+  + 
Sbjct: 281 VGPANFLDIGGGANADVMSHGLDVILNDPDVRSVFVNVFGGITACDEVAKGIVAALDILG 340

Query: 350 -KINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
              + P+V+RL+G  V  G  ++AE+   ++T
Sbjct: 341 DAASKPIVVRLDGNKVAEGRAILAEAHHPLVT 372


>gi|15790522|ref|NP_280346.1| succinyl-CoA synthetase subunit beta [Halobacterium sp. NRC-1]
 gi|10581028|gb|AAG19826.1| succinyl-CoA synthetase beta chain [Halobacterium sp. NRC-1]
          Length = 423

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 199/372 (53%), Gaps = 19/372 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P  +  + +SV  A      L  P+  VK+Q+H GGRGK    
Sbjct: 42  MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYPV-AVKAQVHVGGRGKA--- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +          ILG  L        G  V+ V VE+  D   ELY+
Sbjct: 98  -------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYV 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+ G    + S +GG+DIE VA++ P+ I +  +DP  G+ +    +      ++
Sbjct: 144 GVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIE 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   +Y  + D D + +EINP+++     +   D+ +  D++AL+R     
Sbjct: 204 QDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQPAFA 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ + + ED  E +A ++   Y+ LDGN G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 264 DMEEDAAEDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTTLDLVDYYGGQPANFLDIG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  D+VA A  ++ SD +V  ++ NIFGGI R D + KGI SA+++  +I  P+V+RL
Sbjct: 324 GGAKADRVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGINSALEQFDEIPTPVVVRL 383

Query: 360 EGANVDIGNRLI 371
            G N   G  ++
Sbjct: 384 AGTNAAEGREIL 395


>gi|314969859|gb|EFT13957.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL037PA1]
          Length = 391

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 223/411 (54%), Gaps = 50/411 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFPN------------LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
           G         FP+            L++ + D+D +L+E+NP+I   +GR+  +D K++ 
Sbjct: 161 G---------FPDSEQDAIVSAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTV 211

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D+NA +R  D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +  
Sbjct: 212 DNNASFRQPDHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAY 271

Query: 289 YG------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
            G       APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI
Sbjct: 272 AGENFPGSPAPANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGI 331

Query: 343 LSAVKEV--KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
             A++++  K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 332 KGALEKLGDKAVKPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|314924240|gb|EFS88071.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL001PA1]
          Length = 391

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L + + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLSETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQS 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDLLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|325960124|ref|YP_004291590.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Methanobacterium
           sp. AL-21]
 gi|325331556|gb|ADZ10618.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Methanobacterium
           sp. AL-21]
          Length = 368

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/393 (34%), Positives = 213/393 (54%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEY AK + +   +PV    ++ +   A  A   +  P+  +KSQI  GGRGK    
Sbjct: 1   MKIHEYIAKEIFKAEGIPVPASQMVKNSEDAHKAALEINKPV-AIKSQILVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  +          +ILGST+        G  V  V VE+   I  E Y+
Sbjct: 57  -------GGIQFATDPDEARDVSSKILGSTV-------KGELVEMVLVEEKLSIESEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR++     +AS+ GGM+IEEVA + P+KI K  I+ L          +   + + 
Sbjct: 103 SVVLDRSAKKPLIMASSSGGMEIEEVATETPEKIVKYYINSLDEFLPYQGREIAIKMGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   L + F   D ++ EINPL++ K G +   D+K+  DD+ALYR   + 
Sbjct: 163 NELISKVGGIIWKLVQIFDKYDATIAEINPLVLTKEGIIAA-DAKLDIDDDALYRQKKLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL ++          K    +Y+ LDGNI  + NGAGL ++ MD++KLYGG PA FLD+G
Sbjct: 222 ELENI----------KSGEFAYVKLDGNIAVIGNGAGLTLSGMDMLKLYGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+ ++ +A A  I+ SD  VK + +N+ GGI R D + +G+L  +KE +  IPLV+RL 
Sbjct: 272 GGSSRENIAKALNIVISDPDVKTVFLNVLGGITRADDVARGVLDVMKESERKIPLVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N + G +++ ++G++  T+  ++ AAQK V 
Sbjct: 332 GTNEEEGQKILKDAGVSFETS--MEAAAQKAVE 362


>gi|296393907|ref|YP_003658791.1| succinyl-CoA synthetase subunit beta [Segniliparus rotundus DSM
           44985]
 gi|296181054|gb|ADG97960.1| succinyl-CoA synthetase, beta subunit [Segniliparus rotundus DSM
           44985]
          Length = 388

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 213/392 (54%), Gaps = 31/392 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A    + +  P+ +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELYLKHGVPTTPGSVTDTPEGAREIAERIGKPV-MVKAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + I+G  +        G  V  + + + ADI  E Y 
Sbjct: 57  -------GGVKYAATPQEAYEHAKNIIGLDI-------KGHVVKRLLIAEAADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR+ G    I S+ GGM+IEEVA   P+K+ K+ ID   GV   DVA   ++    
Sbjct: 103 SFLLDRSVGGFIAIVSSAGGMEIEEVAHTTPEKVAKVPIDYNAGV---DVAKGRELAAAG 159

Query: 181 G--QARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G  +A +D   +    L++ F  +D +L+E+NPL    + ++  LD K++ D NA +RH 
Sbjct: 160 GLPEAILDKAAVTIAKLWEVFVKEDATLVEVNPLARTPDDQILALDGKVTLDGNAEFRHP 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----- 292
              E   + E+D  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 220 GHAEFAALVEQDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEGHNGVK 279

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA    +AA   +I  D  V  + +N+FGGI  CD +  GI+ A+  +   
Sbjct: 280 PANFLDIGGGASASVMAAGLDVILGDQQVTSVFVNVFGGITACDAVANGIVGALDTLGDA 339

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAI 382
              P+V+RL+G NV++G +++AE    ++T +
Sbjct: 340 ATKPIVVRLDGNNVELGRQILAERAHPLVTEV 371


>gi|323473766|gb|ADX84372.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus REY15A]
 gi|323476416|gb|ADX81654.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus HVE10/4]
          Length = 337

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/396 (36%), Positives = 222/396 (56%), Gaps = 60/396 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S     +           VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEPIRWQGKA--------VVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++     + ++  P                 +E Y 
Sbjct: 49  ------RGLVRVTEDVYNTILELKKLGVEKFLVEEFVPHE---------------KEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +G    + S +GG+D+E+ AKD    + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETGEPMLVLSREGGIDVEQ-AKD----VKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 GL-----GQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ E+G+NV      DD  + I  AV+
Sbjct: 306 GTNEELGKKILRENGVNV-----YDDVLKMIGDAVR 336


>gi|314964914|gb|EFT09013.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL082PA2]
 gi|315093786|gb|EFT65762.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL060PA1]
 gi|327325605|gb|EGE67404.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL103PA1]
          Length = 391

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 32/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   
Sbjct: 104 SILLDRGERRYLAMCSRKGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEA 160

Query: 181 GQARIDGGDLFP---NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           G    +   + P    L + + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  
Sbjct: 161 GFPDSEQDAIVPAVLKLSETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQS 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------G 291
           D   L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       
Sbjct: 221 DHAGLVDRATTDLLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSP 280

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
           APANFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  
Sbjct: 281 APANFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGD 340

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           K   PLV+RL+G  V  G +++ E    ++T +  +D+AA K
Sbjct: 341 KAVKPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASK 382


>gi|188587004|ref|YP_001918549.1| succinyl-CoA synthetase, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351691|gb|ACB85961.1| succinyl-CoA synthetase, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 375

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 213/393 (54%), Gaps = 27/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY AK L+ +  + V +G    S    E     L  P  V+KSQ+  GGRGK    
Sbjct: 1   MKLYEYMAKKLMNQCGISVPRGEAAFSAQEVEQKFTGLDSPA-VIKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + +      +E+    +        G +V  V VE+  DI  ELYL
Sbjct: 57  -------GGIKFADTPQEARKVSKELFNMQI-------KGEQVTGVLVEEQLDISSELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  +     +ASTQGG+DIEEV+ D    I K  I+P  GV       + D L L 
Sbjct: 103 SITVDTGTKKPLIMASTQGGVDIEEVSDDL---IVKRHIEPDWGVLPYLCREITDQLNLP 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A      +   LY  F   D  L+EINPL+I ++ R+   D K++ DD+A+YR     
Sbjct: 160 GEASKQVSAIISKLYDTFKTYDAELVEINPLVITEDNRVIAADGKMTIDDDAMYRQ---D 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL  VSE+ S E + ++  LS++ L+G+I  M NGAG+AMAT+D+I+ YGG  ANFLD G
Sbjct: 217 ELPRVSEKTSLEQQVEKIGLSFVELEGDIAIMANGAGMAMATVDVIEQYGGKAANFLDAG 276

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +    A +++  ++  + ++INIFGGI RCD +   ++   +++ I +PLV+RL 
Sbjct: 277 GGASVEPTKKALELLL-NTDPRAVIINIFGGITRCDDVANALVQVKQDMGIKVPLVIRLI 335

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G   +   +++ + G++     D+ +AA+K V 
Sbjct: 336 GTKDEEAVKILGQHGISAYQ--DMGEAAKKAVE 366


>gi|55377354|ref|YP_135204.1| succinyl-CoA synthetase subunit beta [Haloarcula marismortui ATCC
           43049]
 gi|74520095|sp|Q5V4Q4|SUCC_HALMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|55230079|gb|AAV45498.1| succinyl-CoA synthetase beta chain [Haloarcula marismortui ATCC
           43049]
          Length = 382

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 215/400 (53%), Gaps = 22/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P     +  +V  A  A + +  P+  +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKQVFADAGIPTPASQLAETVDEAVDAAEEIGYPV-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  S +       +I+G  L        G  V+ V VE+  D + ELY+
Sbjct: 57  -------GGIKLVESKEEAREAAEDIIGMDL-------KGYHVSKVLVEEAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  IDP  G+       +     + 
Sbjct: 103 GVTMDRGEGRPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKVVYEAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY+ + D+D +  EINPL+I  +  +   D+ ++ D +AL+R  +I 
Sbjct: 163 REVANDVASVLTTLYQLWDDRDGADTEINPLMITSDDEVIAADAVMNVDGDALFRQPEIA 222

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           E+  + +E D  E +A ++   Y+ LDGN+G + NGAGL M T+D++  Y G PANFLDV
Sbjct: 223 EMGEEAAEGDELEQKADEYGFDYVRLDGNVGIIGNGAGLVMTTLDLVDYYDGEPANFLDV 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMR 358
           GGGA  D++A A  ++ SD +V  ++ NIFGGI R D +  GI  A+++  +I  P+ +R
Sbjct: 283 GGGAKADRIANALDMVFSDENVDSVVFNIFGGITRGDEVANGINQALEQFDEIPKPVTVR 342

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           L G N + G  ++ E  + V     L+DA Q+ V   K V
Sbjct: 343 LAGTNAEEGMEILNEDLVTVEHT--LEDAVQRAVEYAKEV 380


>gi|308176362|ref|YP_003915768.1| succinyl-CoA synthetase beta subunit [Arthrobacter arilaitensis
           Re117]
 gi|307743825|emb|CBT74797.1| succinyl-CoA synthetase beta subunit [Arthrobacter arilaitensis
           Re117]
          Length = 390

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 213/399 (53%), Gaps = 27/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L   + VPV  G+V  +   A++A + + G + V       G RGK    
Sbjct: 1   MDLYEYQARDLFEAHGVPVLAGIVAYTPEEAKAAAEKIGGVVVVKAQVKVGG-RGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +          ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEAFEHASNILGMDI-------KGHTVNKVMIAQGADIAEEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +A + P  + K+ +DP++G+ +   A + +     
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEVLAVERPDALAKVAVDPIVGIDAAKAAEIVEAANFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRHLDI 239
            + R    +    L+  F ++D +L+E+NPL+    G +  LD K+S DDNA   RH   
Sbjct: 163 EELRAKVAETIQKLWVVFKEEDATLVEVNPLVKTGAGDIVALDGKVSLDDNASEVRHPAH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D    D  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELEDKGAADPLEAKAKAAGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGSVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +A    +I +D  VK + +N+FGGI  CD +  GI+ A+  +    N
Sbjct: 283 NFLDIGGGASAEVMANGLDVILNDPQVKSVFVNVFGGITACDAVANGIVGALNTLGDAAN 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
            PLV+RL+G NV+ G  ++A++   ++T A  +D+ A K
Sbjct: 343 KPLVVRLDGNNVEEGRAILAQANHPLVTLAATMDEGADK 381


>gi|313901647|ref|ZP_07835082.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468089|gb|EFR63568.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 373

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/397 (36%), Positives = 212/397 (53%), Gaps = 30/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK + R+  +P  +G V ++   A      + GP+  VKSQ+ AGGRGK    
Sbjct: 1   MKFFEYMAKEVFRERGIPTPRGRVAATPEEAARVAAEVGGPV-AVKSQVLAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +         ++LG  +        G RV  V VE+   I RELYL
Sbjct: 57  -------GGIRFADTPDQARQVAADLLGQEV-------RGYRVERVLVEEKLRIDRELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLEL 179
            + VD    +   IAS  GG++IEEV    P+K I K  +D  +G+       +   L L
Sbjct: 103 GIAVDTGRKLPLVIASVHGGVNIEEV----PEKDIVKRPVDITLGLYPYFARGIARRLGL 158

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G       DL   LY+ F D D  L+EINPL+I  + RL   D +++ DD++ +RH D+
Sbjct: 159 EGAVARQFADLLTRLYRIFRDYDAELVEINPLVISGD-RLIAADGRLNIDDDSRFRHEDL 217

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E+ + +E + R    ++  LSY+ LDG+I  M NGAG+ MAT+D++  YGG   NFLD 
Sbjct: 218 PEVSEATELEQR---VREIGLSYVELDGDIAVMANGAGITMATIDVLAEYGGRAMNFLDA 274

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + +A A  ++ S ++ K I +NIFGGI RCD +   I++  ++  I +PLV+RL
Sbjct: 275 GGGAAVEPMAKAMAVLVS-TNPKAIFVNIFGGITRCDDVANAIVTVKQQQGIPVPLVVRL 333

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N D G  ++ E G+      D+ +AA+K V   +
Sbjct: 334 VGTNEDKGVAILREHGIEAFR--DMGEAARKAVELAR 368


>gi|282860913|ref|ZP_06269979.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. ACTE]
 gi|282564649|gb|EFB70185.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. ACTE]
          Length = 393

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/403 (34%), Positives = 221/403 (54%), Gaps = 41/403 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGK-SVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + E   +I  E Y
Sbjct: 57  -------GGVKLAADPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++ + GV       +    E+
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGV------DIAKAREI 156

Query: 180 QGQARIDG------GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
             QA+          +    L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA 
Sbjct: 157 VAQAKFPADVAEGVAEALVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENAD 216

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-- 291
           +R    + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G   
Sbjct: 217 FRQPGHEALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKH 276

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +A   +II  D  V+ + +N+FGGI  CD +  GI+ A++ 
Sbjct: 277 GDVKPANFLDIGGGASAEVMANGLEIILGDPDVRSVFVNVFGGITACDEVANGIVQALEL 336

Query: 349 VK-----INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +K     +  PLV+RL+G N ++G ++++++   ++  +D  D
Sbjct: 337 LKTKGEDVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMD 379


>gi|292656587|ref|YP_003536484.1| succinyl-CoA synthase subunit beta [Haloferax volcanii DS2]
 gi|291371580|gb|ADE03807.1| succinyl-CoA synthase, beta subunit [Haloferax volcanii DS2]
          Length = 381

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 214/399 (53%), Gaps = 21/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +  +PV +  + SSV     A++ +  P   +K+Q+H GGRGK    
Sbjct: 1   MKLHEYQAKDIFAEAGIPVPESRLASSVEEVMEAVEEIGYPA-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +          +ILG  L        G  V+ V VE G D   ELY+
Sbjct: 57  -------GGIKIATDEDEARQAAEDILGMDL-------KGYTVDRVLVEAGVDFENELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+ G    + ST+GG++IEEVA++ P  I +  IDP  G+       +     + 
Sbjct: 103 GVTMDRSEGKPVAMVSTEGGVNIEEVAEENPDAIAREHIDPAFGLHPYQARKVVFEAGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D       LY  +   D S +EINP++I  +  +   D+ ++ DD+AL+RH D+ 
Sbjct: 163 RDVAFDVASFLTTLYDLYESNDASDIEINPVMITSDRDIVAADAVMNIDDDALFRHDDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + + E+  E +A ++   Y+ L GN+G + NGAGL M T+D++  +GG PANFLD+G
Sbjct: 223 AMEEDAYENDLEAKAGEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYFGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++VA A  ++ SD +V  ++ NIFGGI R D + KGI  A++   +I  P+V+RL
Sbjct: 283 GGAKAERVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGINEALESFDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            G N + G  ++    + V     L+DA Q+ V   + V
Sbjct: 343 AGTNAEEGMEILNTDLVQVEGT--LEDAVQRAVENAQEV 379


>gi|169628151|ref|YP_001701800.1| succinyl-CoA synthetase subunit beta [Mycobacterium abscessus ATCC
           19977]
 gi|226734963|sp|B1MJJ0|SUCC_MYCA9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169240118|emb|CAM61146.1| Succinyl-CoA synthetase, beta chain [Mycobacterium abscessus]
          Length = 389

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 209/380 (55%), Gaps = 25/380 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V ++   A++  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTTTAEDAKAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++    ++  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDALTHAQNILGLDI-------KGHIVKKILVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GG++IE  A++ P  + K+ +D + GV       + +  +L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGVEIEVTAEENPDALAKVPVDAVKGVDLALAREIAEKGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDSAAVTIQKLWEVFVGEDATLVEVNPLVRTPDNQILALDGKVTLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDKDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  DS VK + +N+FGGI  CD +  GI+ A+K +    + 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVGALKTLGNTASK 342

Query: 354 PLVMRLEGANVDIGNRLIAE 373
           PLV+RL+G  V+ G  ++AE
Sbjct: 343 PLVVRLDGNKVEEGRAILAE 362


>gi|15899224|ref|NP_343829.1| succinyl-CoA synthetase, beta subunit (sucC) [Sulfolobus
           solfataricus P2]
 gi|227829323|ref|YP_002831102.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           L.S.2.15]
 gi|229578096|ref|YP_002836494.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.G.57.14]
 gi|229583308|ref|YP_002841707.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.N.15.51]
 gi|284996682|ref|YP_003418449.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus L.D.8.5]
 gi|13815784|gb|AAK42619.1| Succinyl-CoA synthetase, beta subunit (sucC) [Sulfolobus
           solfataricus P2]
 gi|227455770|gb|ACP34457.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           L.S.2.15]
 gi|228008810|gb|ACP44572.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.G.57.14]
 gi|228014024|gb|ACP49785.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.N.15.51]
 gi|284444577|gb|ADB86079.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus L.D.8.5]
          Length = 337

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 222/396 (56%), Gaps = 60/396 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S     +           VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEPIRWQGKA--------VVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++     + ++  P                 +E+Y 
Sbjct: 49  ------RGLVRVTEDIYNTILELKKLGVEKFLVEEFVPHE---------------KEIYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG+D+E+ AKD    + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETAEPMLVLSREGGIDVEQ-AKD----VKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 GL-----GQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ E+G+NV      DD  + I  AV+
Sbjct: 306 GTNEELGKKILRENGVNV-----YDDVLKMIGDAVR 336


>gi|326383703|ref|ZP_08205388.1| succinyl-CoA synthetase subunit beta [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197467|gb|EGD54656.1| succinyl-CoA synthetase subunit beta [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 387

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 218/398 (54%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A +  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTTPGRVTDTAADARAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAQTHAENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P ++ ++ +D + GV       + +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLARIAVDAVKGVDLAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFVAEDATLVEVNPLVRTPDDQILALDGKVTLDENAEFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 EFADKDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  DS VK + +N+FGGI  CD +  GI+ A+ ++    + 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVGALAKLGDAASK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           PLV+RL+G  V+ G +++A++   ++T  D +D  A K
Sbjct: 343 PLVVRLDGNKVEEGRKILADANHPLVTLADTMDSGADK 380


>gi|325001241|ref|ZP_08122353.1| succinyl-CoA synthetase subunit beta [Pseudonocardia sp. P1]
          Length = 391

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 211/390 (54%), Gaps = 26/390 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G  + +   A +A   L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKDLFAAHGVPVLPGKTVDNAADAAAAASEL-GTAVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V + +DI  E Y 
Sbjct: 57  -------GGVKLAQSADEAKEKAEAILGLDI-------KGHTVHQVLVTEASDISEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     + S +GGM+IEE+A + P+ + ++ IDP+ GV       +    ++ 
Sbjct: 103 SFLLDRSNRTFLAMCSAEGGMEIEELAVERPEALARIAIDPIAGVDKAKADEIVAAGKIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  ++   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +RH    
Sbjct: 163 AAVADEAANVIVKLWETFVAEDATLVEVNPLVRDPQDKVIALDGKVTLDENAAFRHEAHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGA-----PA 294
           EL D   E+  E +AK   L+Y+ LD G +G + NGAGL M+T+D++   G A     PA
Sbjct: 223 ELVDERTENPLEAKAKAKGLNYVKLDGGQVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMADGLDVILGDDEVKSVFVNVFGGITACDAVANGIVEALKILGDDAT 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAI 382
            PLV+RL+G NV+ G +++A++   ++T +
Sbjct: 343 KPLVVRLDGNNVEEGRKILADANHPLVTVV 372


>gi|227826683|ref|YP_002828462.1| succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.14.25]
 gi|238618770|ref|YP_002913595.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.4]
 gi|227458478|gb|ACP37164.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.14.25]
 gi|238379839|gb|ACR40927.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.4]
          Length = 337

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 221/396 (55%), Gaps = 60/396 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S     +           VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEPIRWQGKA--------VVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++     + ++  P                 +E Y 
Sbjct: 49  ------RGLVRVTEDVYNTILELKKLGVEKFLVEEFVPHE---------------KEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG+D+E+ AKD    + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETAEPMLVLSREGGIDVEQ-AKD----VKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 GL-----GQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ E+G+NV      DD  + I  AV+
Sbjct: 306 GTNEELGKKILRENGVNV-----YDDVLKMIGDAVR 336


>gi|302524119|ref|ZP_07276461.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. AA4]
 gi|302433014|gb|EFL04830.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. AA4]
          Length = 398

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 221/393 (56%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++++EYQA+ L   + VPV  G V S+   A++A + + G   VVK+Q+  GGRGK    
Sbjct: 10  VDLYEYQARDLFAAHGVPVLPGAVASTPEEAKAAAEQI-GTQVVVKAQVKVGGRGKA--- 65

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G   + V V + +DI  E Y 
Sbjct: 66  -------GGVKLAQTPDEAKEKAEAILGLDI-------KGHITHRVLVAEASDIASEYYF 111

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS++GGM+IE++A + P  + K+ +D + GV       +       
Sbjct: 112 SFLLDRANRTFLAMASSEGGMEIEQLAVERPDALAKIPVDAIKGVDKATALEILKAGHFP 171

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +  D+   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +RH   +
Sbjct: 172 AEIIDEAADVVVKLWETFVSEDATLVEVNPLVRDPQDKIIALDGKVTLDENAAFRHPAHE 231

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
           EL D   E+  E +AK  NL+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 232 ELVDKQAENPLEAKAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 291

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  +   
Sbjct: 292 FLDIGGGASAEVMAAGLDVILNDTDVKSVFVNVFGGITACDAVANGIVEALKILGDEATK 351

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV  G +++A++   ++T +D  D
Sbjct: 352 PLVVRLDGNNVVEGRQILADANHPLVTVVDTMD 384


>gi|118431318|ref|NP_147696.2| succinyl-CoA synthetase beta chain [Aeropyrum pernix K1]
 gi|116062641|dbj|BAA80050.2| succinyl-CoA synthetase beta chain [Aeropyrum pernix K1]
          Length = 378

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 216/397 (54%), Gaps = 26/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT--LPGPLYVVKSQIHAGGRGKGR 58
           M ++E++AK +LR Y V     V++       + I+   L  PL VVKSQ+   GRGK  
Sbjct: 1   MKLYEFEAKEILRMYGVETPPSVLVMPGDDVAAKIREAGLEPPL-VVKSQVLVAGRGKAG 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             +L    +  VRV   L      I+ IL   L+ ++  P  +               EL
Sbjct: 60  GIKLVESVEDAVRVAGELWR--KPIKGILPGALLVEKAVPHDA---------------EL 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+++DR+      +AS  GGMDIEE+A++ P+ I +  +DP +G+   +   +   + 
Sbjct: 103 YTSIIIDRSERRPVILASRFGGMDIEEIAREKPESIVRHYVDPFLGLRGYEARMVGKAIG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L G+           LY+ F   +  L+E NPL I+ + ++  LD++I  DDN+L+RH +
Sbjct: 163 LSGRLLNSYASFLQVLYRVFTALEAELVESNPLAIVGD-KVVPLDARIIVDDNSLFRHRE 221

Query: 239 IQELRDVS---EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           + E R V    E    E++A+Q  L ++ L+G+IG + NGAGL MATMD++  +GG PAN
Sbjct: 222 LVERRRVEQRGEYTEWEVKARQQGLPFVELEGDIGIIGNGAGLTMATMDLVYHFGGRPAN 281

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD+GGGA  + V  A   +      + I IN+FGGI R D + +GI++AV+E   + PL
Sbjct: 282 FLDIGGGARAELVKKAVSFLLEFPKAEKIFINVFGGITRGDEVARGIVAAVRESGSSKPL 341

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           V+RL G   + G R++ E+G+   T  D  +A +K+V
Sbjct: 342 VVRLSGTREEEGRRILEEAGIYAYT--DPVEAVKKVV 376


>gi|84490169|ref|YP_448401.1| hypothetical protein Msp_1386 [Methanosphaera stadtmanae DSM 3091]
 gi|84373488|gb|ABC57758.1| SucC [Methanosphaera stadtmanae DSM 3091]
          Length = 371

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 214/398 (53%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEY AK + R  N+ + +  + SS   A    K +  P+  VKSQ+ +GGRGK    
Sbjct: 1   MNIHEYVAKKIFRVSNIKIPESYLASSPEEAAEKTKLIGKPV-AVKSQVLSGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
                  GG+    + +      +E+   T+          +V  V +E+  +  + E Y
Sbjct: 57  -------GGILFADTPEEAAQRTKELFTKTI-------KDEKVTQVLIEEKVENKISEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+++DR +     +AS  GGMDIE+VAK+ P+KI K  ++PL         ++   + +
Sbjct: 103 LSIILDRDAKKPLIMASMAGGMDIEQVAKESPEKIVKQYVEPLEEFMPYQARNIAFKMGV 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                   G+    LY+AF D D ++ EINPLI   +G +   D+K++ DD+A +RH  +
Sbjct: 163 DTNEVSAVGNFIWKLYQAFNDYDATVAEINPLIKTPDGFI-AADAKMAIDDDAFFRHKKL 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           ++  D+  ED  +      +L+YI LDGNI  + NGAGL +  MD+I+ YG  PA FLDV
Sbjct: 222 KQF-DLEHEDDSD------DLAYIKLDGNIAVIGNGAGLTLTGMDLIQYYGEKPATFLDV 274

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++ +  A +++  +  VK I +N+ GGI R D +   +++  KE + +IP+V+RL
Sbjct: 275 GGGASEEVITRALRLVLKNPKVKVIFLNVLGGITRADDVANAVVNVTKEHESDIPVVIRL 334

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N + G +++ E   N+     ++ AAQ  V  + G
Sbjct: 335 TGTNEEEGQKILTEH--NIPFETSMERAAQIAVAKLHG 370


>gi|229583847|ref|YP_002842348.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.27]
 gi|228018896|gb|ACP54303.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.27]
          Length = 337

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 221/396 (55%), Gaps = 60/396 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S     +           VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEPIRWQGKA--------VVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++     + ++  P                 +E Y 
Sbjct: 49  ------RGLVRVTEDVYNTILELKKLGVEKFLVEEFIPHE---------------KEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG+D+E+ AKD    + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETAEPMLVLSREGGIDVEQ-AKD----VKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 GL-----GQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ E+G+NV      DD  + I  AV+
Sbjct: 306 GTNEELGKKILRENGVNV-----YDDVLKMIGDAVR 336


>gi|124485312|ref|YP_001029928.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Methanocorpusculum labreanum Z]
 gi|124362853|gb|ABN06661.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Methanocorpusculum labreanum Z]
          Length = 361

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/378 (37%), Positives = 212/378 (56%), Gaps = 39/378 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY+AK + R+  +PV   V+I+S   A +A K +   + V+K+Q+  GGRGK    
Sbjct: 1   MKFREYEAKQIFREAGIPVPNSVLITSADEANAAQKKVAEKV-VLKAQVDVGGRGKAG-G 58

Query: 61  ELPADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            LPA+++            ISD+ R++   T+        G  V  + VE+  +I  E Y
Sbjct: 59  ILPANAEN-----------ISDVARDLFAKTI-------KGLPVEKILVEEALEISHEYY 100

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-- 177
           LS+ +DR   M   + S++GG++IE +AK+ P+ + ++ +DP          +L D +  
Sbjct: 101 LSITIDRAKKMPLILFSSEGGVEIETLAKERPEALRRVYVDP-------SFVTLPDFIVR 153

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            + G    + G +  +L+  F  +D  L EINPL++   G L   D KI  DDN+L R  
Sbjct: 154 NVIGTNPKEIGTIVRDLFAVFRSRDAVLAEINPLVMTPKGIL-AADGKIILDDNSLIRQ- 211

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I E RD++    RE EA++H  SY+ L+GNIG + NGAGL MAT+DII  Y G  ANFL
Sbjct: 212 GISENRDLT---PREAEAEKHGFSYVELEGNIGVIGNGAGLTMATLDIISHYHGKAANFL 268

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  D+V  A +++ S   VK I++N+ GGI RCD + KGI+    E  +  P+++
Sbjct: 269 DVGGGAASDRVMYAVQLVASMPGVKVIVVNLLGGITRCDEVAKGII----EAGVPQPVIV 324

Query: 358 RLEGANVDIGNRLIAESG 375
           R+ G N + G RL+ E G
Sbjct: 325 RIAGTNEEEGRRLLQECG 342


>gi|258651502|ref|YP_003200658.1| succinyl-CoA synthetase subunit beta [Nakamurella multipartita DSM
           44233]
 gi|258554727|gb|ACV77669.1| succinyl-CoA synthetase, beta subunit [Nakamurella multipartita DSM
           44233]
          Length = 400

 Score =  219 bits (557), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/401 (34%), Positives = 223/401 (55%), Gaps = 32/401 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VP   G V  +V  A +A + L  P+ +VKSQ+  GGRGK    
Sbjct: 1   MDLYEYQAKELFVAHGVPAPAGRVARTVEEAVAAAQELGVPV-MVKSQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTL---ITKQTGPTGSRVNCVYVEDGADILRE 117
                  GGV+  ++L  V +    ILG  +   +T+Q          V +   ++I +E
Sbjct: 57  -------GGVKFAATLDDVRTHAGNILGLDIKGHVTRQ----------VLITPASEIAQE 99

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+S L+DR++     +A+  GGM+IE++A++ P  + ++ ++ L GV +E    +    
Sbjct: 100 YYVSYLLDRSNRTFLAMATKDGGMEIEQLAEERPDALARIPVNALTGVDAEKAKEIAAAG 159

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +           +   L+  F  +D +L+E+NPL+    G++  LD K+S D NA +RH 
Sbjct: 160 KFPADVVDQVEAVLVGLWDTFVGEDATLVEVNPLVKDGEGKVVALDGKVSLDANADFRHP 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----- 292
           +   L D + E+  E+ AK+  L+Y+ LDG++G + NGAGL M+T+D++   G A     
Sbjct: 220 EHAALADTAAENPLEVAAKEKGLNYVKLDGDVGIIGNGAGLVMSTLDVVAYAGEAHGGVK 279

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA  + +A   +II SD  VK + +N+FGGI  CD +  GI+ A+K +  +
Sbjct: 280 PANFLDIGGGASAEVMANGLEIILSDPDVKAVFVNVFGGITACDAVANGIVGALKMLGDE 339

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQK 390
              PLV+RL+G NV  G  ++ E+    VI A  +D+ A K
Sbjct: 340 ATKPLVVRLDGNNVLEGRAILNEANHPLVIQAETMDEGADK 380


>gi|312136261|ref|YP_004003598.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanothermus
           fervidus DSM 2088]
 gi|311223980|gb|ADP76836.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanothermus
           fervidus DSM 2088]
          Length = 367

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 210/393 (53%), Gaps = 32/393 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY AK L +   +P+ +G V  +      A K +  P+  +K+Q+  GGRGK    
Sbjct: 1   MKLYEYNAKKLFKMEGIPIPEGYVAKNPDEVYEASKKINAPV-ALKAQVLVGGRGKS--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  SS K+   D+ + L +T I       G +V  + +E+  DI  ELY+
Sbjct: 57  -------GGIKFASSPKNAY-DLSKSLFNTKIK------GEKVKKILIEEKIDIKEELYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     + S  GG+D+EE  ++    I K  ++PL      +   +   + L+
Sbjct: 103 SVIIDRAAKKPLIMGSVHGGVDVEEKVRE--NSIVKYHVNPLDKFMPYEGREIARKMGLE 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                  G++    YK F   D  L+EINPL I  + ++  LD+KI  D + +YRH +IQ
Sbjct: 161 SNLIPKVGNIIWKTYKLFKKYDAKLVEINPLAITPDNKVIALDAKIDLDYDGVYRHPEIQ 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L           E K+   ++  LDG+I  + NGAGL +A MDII LYGG PA FLD+G
Sbjct: 221 NLE----------EYKEREFAFTKLDGDIAVIGNGAGLTLAAMDIISLYGGKPATFLDIG 270

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  A   ++S S+VK I +NI GGI R D + KGI+ A  E+  +IP+V+RL 
Sbjct: 271 GGASSEVIEKALNFVSSLSNVKVIFVNILGGITRADEVAKGIVKASNELDRDIPIVIRLT 330

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N   G+ ++  +G+   T+  L+ AA+K V 
Sbjct: 331 GTNQRKGHEILKNAGIPFETS--LEKAAKKAVE 361


>gi|110668756|ref|YP_658567.1| succinyl-CoA synthetase subunit beta [Haloquadratum walsbyi DSM
           16790]
 gi|109626503|emb|CAJ52965.1| succinate--CoA ligase beta subunit (ADP-forming) [Haloquadratum
           walsbyi DSM 16790]
          Length = 381

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 209/394 (53%), Gaps = 23/394 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK L     +PV      +S     +A++ +  P   +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKELFADAGIPVPDSQRATSSDEVLTAVEDIGYPA-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++    +   +   EILG  +        G  VN V VE   D   ELY+
Sbjct: 57  -------GGIKIAGDKQEAKAYAEEILGMEI-------KGYTVNSVLVEASVDFENELYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+SG    + ST+GG+DIE VA + P  I +  IDP+ G+             + 
Sbjct: 103 GITMDRSSGKPVAMVSTEGGVDIESVAAETPDAIAREHIDPVFGLHPYQARRAVYDAGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY  +   D S +EINP++I  +  +   D+ ++ D++AL+R  ++ 
Sbjct: 163 SDVASDVAHILSTLYTQYESADASEIEINPVMITTDRDVVAADAVMNIDEDALFRQPELA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +  D  EI+A ++   Y+ LDG++G + NGAGL M T+D++  YGG+PANFLD+G
Sbjct: 223 SMEDTAAGDDLEIKADEYGFDYVRLDGDVGIIGNGAGLVMTTLDLVDYYGGSPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP--LVMR 358
           GGA  ++VA A  ++ +D +V  I+ NIFGGI R D +  GI  A+++    IP  +V+R
Sbjct: 283 GGAKAERVANALDMVFTDDNVDAIVFNIFGGITRGDEVATGINEALEKFD-TIPKDVVVR 341

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           L G N + G  ++    + V     L+DA ++ V
Sbjct: 342 LAGTNAEEGMEILNTDRVEVEAT--LEDAVEQAV 373


>gi|71033113|ref|XP_766198.1| ATP-specific succinyl-CoA synthetase beta subunit [Theileria parva
           strain Muguga]
 gi|68353155|gb|EAN33915.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Theileria parva]
          Length = 453

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 209/424 (49%), Gaps = 36/424 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           +N+ EY    +L++  V V +    ++   A  A K++      P  VVK+ +  GGRGK
Sbjct: 30  LNVSEYIGMTILKRNGVRVPEFRNATTPEEAFEAGKSIQQLTNTPELVVKALVLTGGRGK 89

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F         GV +  S   V +  R +LG+ L TKQT   G     V V     I  
Sbjct: 90  GTFN----TGFKGVEIVKSPSEVSACARGMLGNYLTTKQTVGKGLLCTEVLVAQKLSIKS 145

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS  +DR SG +  IA+  GG ++EE+A  +P  +  L I PL G+T E    L   
Sbjct: 146 ERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHQHPDAVLTLQISPLTGLTPELTELLVKQ 205

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN-------------------- 216
           L    +           LY  F   D +LLE+NPL+   +                    
Sbjct: 206 LSFSNEVTEQVKKTVQQLYDTFVKSDGTLLEVNPLVETHSDVKSSPTQSVESSANSSVES 265

Query: 217 -------GRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI 269
                    +   D+K+  DDNA YR  ++ ++  V      E EA +  L+YI+LDGN+
Sbjct: 266 SVKSSVKSNVMACDAKLIVDDNAKYRQSELFDMTPVIRTKEEE-EADRAGLNYISLDGNV 324

Query: 270 GCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
            C+VNGAGLAMATMD+I+ +GG  ANFLDVGG +  + ++ A +I+ SD   K +L+NI 
Sbjct: 325 ACIVNGAGLAMATMDLIQHHGGKAANFLDVGGNSTPETLSKALEIVNSDLRAKVLLVNIV 384

Query: 330 GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           GGI+RCD   +  + A K++   +P+V+RL+G   +   +L+ ES +  +   D D   +
Sbjct: 385 GGIVRCDKFAESFVEASKKLSRQLPVVIRLQGTRAESAKKLLNESNIPHLFCTDFDSVCK 444

Query: 390 KIVH 393
             V 
Sbjct: 445 SAVE 448


>gi|78043370|ref|YP_359761.1| succinyl-CoA synthetase subunit beta [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995485|gb|ABB14384.1| succinyl-CoA synthetase, beta subunit [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 373

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 220/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQ K ++R++ + V +G V   +  A++ ++ +     V+K+Q+  GGRGK    
Sbjct: 1   MKLFEYQVKKIMREFGILVPRGEVFFDLEQAKNHLEKVGEG--VIKAQVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+          IL  T+        G +V  + +E+   I +ELYL
Sbjct: 56  -------GGVKIFSNPAEGFELAEAILKMTI-------KGEKVQAILIEEKIPIEQELYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD        IAS  GG+DIEEV +   ++I KL +DPLIGV +     +   L L 
Sbjct: 102 SIFVDGRIKKPVVIASKAGGVDIEEVPE---EEILKLPVDPLIGVRNYHGNLVAQKLGLT 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+ F      L+EINPL+I +  +L   D K++ DD+A +R     
Sbjct: 159 GDLGKQLATLLINLYRIFETYQAELVEINPLVISRE-KLIAADGKMTVDDDARFRWP--A 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L    E+   E  A++  +S++ LDG+I  M NGAG+ MAT+D+I  +GG P NF+D G
Sbjct: 216 DLPFNEEKTPLEKRAEEIGVSFVELDGDIAVMANGAGITMATLDLIAYFGGRPKNFMDAG 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A A  ++ S ++ K ILINIFGGI RCD + K  L+  +E +I +P+V+RL 
Sbjct: 276 GGANAEQMAKALDLLIS-TNPKAILINIFGGITRCDEVAKAYLTVKQEREITVPVVIRLV 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N DIG +++ E+G+   ++  L +A  K V   K
Sbjct: 335 GTNEDIGVKMLQEAGVESFSS--LREAVIKAVELAK 368


>gi|300710740|ref|YP_003736554.1| succinyl-CoA synthetase subunit beta [Halalkalicoccus jeotgali B3]
 gi|299124423|gb|ADJ14762.1| succinyl-CoA synthetase subunit beta [Halalkalicoccus jeotgali B3]
          Length = 381

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 214/397 (53%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK++     +P     +  S     SA +++  P+  VK+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKSVFADAGIPTPDSQLAESTEEVLSAAESVGYPV-AVKAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +  + +        ILG  L        G  V  V VE+  D + ELY+
Sbjct: 57  -------GGIELVENDEEAREAADSILGMDL-------KGYTVERVLVEEAVDFVDELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + S +GG++IEEVA++ P  I +  +DP  G+       +     + 
Sbjct: 103 GVTMDRGEGKPVAMVSRKGGVNIEEVAEEDPDAIAREHVDPAFGLQPYQARRVVYDAGID 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   L+  + D+D S  EINPL++  +G +   D+ ++ D++AL+R  ++ 
Sbjct: 163 REVAGDVSSVLTTLFSLWDDRDASDTEINPLMVTSDGEVIAADAVMNIDEDALFRQAELA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + S  D  E +A ++   Y+ L+G++G + NGAGL M T+D++  YGG PANFLDVG
Sbjct: 223 EMEEESYTDDLERKAGEYGFDYVRLEGDVGIIGNGAGLVMTTLDLVDYYGGEPANFLDVG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  D++A A  ++ SD +V+ ++ NIFGGI R D + KGI +A+++  +I  P+V+RL
Sbjct: 283 GGAKADRIANALDMVFSDENVESVVFNIFGGITRGDEVAKGINNALEQFDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N        AE G+ ++ A DL    Q +  AV+
Sbjct: 343 AGTN--------AEEGMEILNA-DLVQVEQTLEEAVQ 370


>gi|150400481|ref|YP_001324247.1| succinyl-CoA synthetase, beta subunit [Methanococcus aeolicus
           Nankai-3]
 gi|150013184|gb|ABR55635.1| succinyl-CoA synthetase, beta subunit [Methanococcus aeolicus
           Nankai-3]
          Length = 360

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 208/397 (52%), Gaps = 38/397 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV  G V      A   IK L  P  V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKKYKIPVPNGFV------ASKPIKELKTPS-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    + K       E              G +VN V +E+   I  E YL
Sbjct: 51  -------GGILFADTTK-------EANQHIKKLIGKKIKGEKVNKVLIEEKLPIKYEYYL 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR       I ST+GG+DIEE+AK+ P+KI K  IDP          +L     L 
Sbjct: 97  GITIDRAEKKPVIIFSTEGGVDIEEIAKNTPEKIIKYYIDPQNEFLPYMARNLLKEAGLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LY  F D D +L+EINPL+I K+ ++   D  ++ DD+A YRH D  
Sbjct: 157 SNRISKVADIIYKLYNVFKDMDGTLVEINPLVITKDKKVLAADGVLNVDDDAEYRH-DYA 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +    SE+D  E        +Y+ LDG+I  + NGAGL +A+MDI+K YGGAPA FLD+G
Sbjct: 216 QFESYSEKDKSE-------FAYVELDGDIAVIGNGAGLTLASMDIVKEYGGAPACFLDIG 268

Query: 301 GGADQDKVAAAF-KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG+D++ V  A  K +  D  +KG+ INI GGI RCD +  GI+ A  E    I   +R+
Sbjct: 269 GGSDKETVEKALEKALEKD--IKGVFINILGGITRCDEVAMGIVKAYYE-HPEIKFSVRM 325

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G +++ ++G+   ++++   A +K++  +K
Sbjct: 326 MGTNEEEGRKILTKNGIPFESSMEY--AVEKLIDMLK 360


>gi|55957256|emb|CAI15150.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
          Length = 298

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/275 (43%), Positives = 169/275 (61%), Gaps = 3/275 (1%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K+Q+ AGGRGKG F+   +  KGGV++  S +   +   +++G  L TKQTG  G   
Sbjct: 26  VIKAQVLAGGRGKGTFE---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRIC 82

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
           N V V +     RE Y ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   
Sbjct: 83  NQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEE 142

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+  E    L   +           +    LY  F   D +++EINP++   +G +  +D
Sbjct: 143 GIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMD 202

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATM
Sbjct: 203 AKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATM 262

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSD 318
           DIIKL+GG PANFLDVGGGA   +V  AFK+ITSD
Sbjct: 263 DIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSD 297


>gi|317122103|ref|YP_004102106.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Thermaerobacter
           marianensis DSM 12885]
 gi|315592083|gb|ADU51379.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 373

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/394 (36%), Positives = 208/394 (52%), Gaps = 30/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK + R+  +P  +G V +S   A      +  P+  +KSQ+ AGGRGK    
Sbjct: 1   MKFFEYMAKEVFRERGIPTPRGRVAASPGEAAQVAAEIGAPV-AIKSQVLAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +          +LG  +        G RV  V VE+   I RELYL
Sbjct: 57  -------GGIRFADTPDQAREVAAGLLGQEV-------RGYRVERVLVEEKLQIDRELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLEL 179
            + VD        IAS  GG++IEEV    P+K I K  +D  +G+       +   L L
Sbjct: 103 GIAVDTARKSPLVIASVHGGVNIEEV----PEKDIVKRPVDITLGLYPYFARGIARRLGL 158

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G       D+   LY+ F D D  L+EINPL+I  + RL   D +++ DD+A +RH D+
Sbjct: 159 EGAIARQFADILTRLYRIFRDYDAELVEINPLVISGD-RLIAADGRLNIDDDARFRHQDL 217

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E+ + +E + R    ++  LSY+ LDG+I  M NGAG+ MAT+D++  YGG   NFLD 
Sbjct: 218 PEVSEATELERR---VREIGLSYVELDGDIAVMANGAGITMATIDVLAEYGGRAMNFLDA 274

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + +A A  ++ S ++ K I +NIFGGI RCD +   I++  ++  I +PLV+RL
Sbjct: 275 GGGAAVEPMAKAMAVLVS-TNPKAIFVNIFGGITRCDDVANAIVTVKQQQGIPVPLVVRL 333

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
            G N D G  ++ E G+      D+ +AA+K V 
Sbjct: 334 VGTNEDKGVAILREHGIEAFR--DMGEAARKAVE 365


>gi|147677693|ref|YP_001211908.1| succinyl-CoA synthetase, beta subunit [Pelotomaculum
           thermopropionicum SI]
 gi|146273790|dbj|BAF59539.1| succinyl-CoA synthetase, beta subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 371

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 213/402 (52%), Gaps = 38/402 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY  K L  KY +PV KG +  +   A      + GP  VVKSQ+  G RGK    
Sbjct: 1   MKMFEYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIGGPC-VVKSQVLIGKRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  +S +       E+   T+        G  V  V VE+   I +ELY+
Sbjct: 57  -------GGIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYM 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS---EDVASLC--D 175
           S+ VD  + M   IAS  GGMDIEE  ++Y   I K  IDP +G+ +    DV       
Sbjct: 103 SITVDGAAKMPVLIASAYGGMDIEEQPEEY---IIKKHIDPEMGMQAFIARDVVRQMGIS 159

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           +    G+  +    +   LYK F ++D  L+EINPL+   + ++   D+K++ DD+AL+R
Sbjct: 160 LNSAHGKQLVS---IIQTLYKIFKEQDAELVEINPLV-FSDDKVIAADAKVTIDDDALFR 215

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D+  + D +   + E  AK   LSY+ LDG+I  M NGAG+ M T+D ++ YGG PAN
Sbjct: 216 HKDLPYVEDRT---ATEKAAKDLGLSYVELDGDIAVMANGAGITMTTLDTLQYYGGRPAN 272

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GGG  ++  A A +++ + +  K I +NIFGGI RCD +   I    K+  I +P+
Sbjct: 273 FLDCGGGTGREVTAKALELLLTKNP-KVIFVNIFGGITRCDDVANAIADVKKDKGIPMPI 331

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQKIVHAVK 396
           V+RL G N DIG  ++   G   I A D +++AAQK +   K
Sbjct: 332 VVRLVGTNQDIGREILKGVG---IEAFDFMNEAAQKAIELTK 370


>gi|304315171|ref|YP_003850318.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588630|gb|ADL59005.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           marburgensis str. Marburg]
          Length = 366

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 214/398 (53%), Gaps = 32/398 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M  +EY AK L R   +PV +G V  +   A    + +   +  +K+Q+  GGRGK    
Sbjct: 1   MKFYEYSAKELFRSEGIPVPEGSVARTPQEASEVAENIDSEV-AIKAQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +     +D+     S L+  +    G  V  V VE    I RE Y+
Sbjct: 57  -------GGIRF--AKPETAADV----ASDLLASRV--KGEEVKSVLVERKISIDREFYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR + M   +AS++GG+DIEE+A + P KI +  ++PL      +   +   + L+
Sbjct: 102 SVVIDRAARMPLIMASSEGGVDIEELAAESPDKIVRYHVNPLDEFLPYEAREIARKMGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   LY  F   D  L EINPL++  +  +   D+K+  DD+++YRH +  
Sbjct: 162 SELIPKVGAVIWKLYHLFRKYDARLAEINPLVLSGDDVI-AADAKLEVDDDSIYRHREFM 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL +   E+           +++ LDG+I  + NGAGL +  MD+IKL GG PA FLD+G
Sbjct: 221 ELDEYEPEE----------FAFVKLDGDIAVIGNGAGLTLTAMDLIKLKGGEPATFLDIG 270

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D +  A  ++ S   VK + +N+ GGI R D + +G+++A+K+ + ++PLV+RL 
Sbjct: 271 GGASEDIIRRAINLVISHPDVKVVFLNVLGGITRADDVARGVVNALKDAERDVPLVIRLT 330

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N + G R++ ++G+   T+  L+ AA+K V   K +
Sbjct: 331 GTNEEEGQRILKDAGIPFETS--LERAAEKAVEISKAL 366


>gi|16082611|ref|NP_394788.1| succinyl-CoA synthetase subunit beta [Thermoplasma acidophilum DSM
           1728]
          Length = 365

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 214/384 (55%), Gaps = 32/384 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + R+Y +PV  G V+SSV      ++ L  P+  VKSQI  GGRGK    
Sbjct: 1   MNLYEYMGKDIFRQYGIPVPNGYVVSSV----DEVRKLTNPV-AVKSQILLGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + + +   ++ +LG+ +           V  V +ED  +I  E Y+
Sbjct: 53  -------GGIKFAKTDQELKDAVKALLGAKV-------RNLTVTKVLIEDMLNIKHEYYV 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R++     IAS  GG++IE V     +KIFK +IDP +G +          + L 
Sbjct: 99  SITLNRSARAPTVIASAMGGVEIETVPD---EKIFKRIIDPSLGYSDFIGREASTFMGLS 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH--LD 238
                   DL   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A++RH   +
Sbjct: 156 PDLSKQFLDLLKKLYNVYKGEDAELVEINPLVETNDGKLIAADAKVVIDSDAMFRHREFN 215

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQ+     E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFLD
Sbjct: 216 IQD----PEKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFLD 271

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GG  + D V  AF ++  ++  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+R
Sbjct: 272 LGGTDNVDIVVNAFDLVL-EAKPKAILVNIFGGVTKCDTVAQGIVDAKKKFDIKIPIVVR 330

Query: 359 LEGANVDIGNRLIAESGLNVITAI 382
           L G + + G +++ E+G+   + +
Sbjct: 331 LSGIHEEEGRQILKENGIEAFSEM 354


>gi|297158168|gb|ADI07880.1| succinyl-CoA synthetase subunit beta [Streptomyces bingchenggensis
           BCW-1]
          Length = 391

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 215/396 (54%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREVTERLGG-RAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     ++   +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDADDAVAKATQILGMDI-------KGHTVHKVMLAQTADIKEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA+  P+ + K+ +D + GVT E  A +    +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGVEIEVVAEQSPEALAKIPVDAIEGVTKEKAAEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   L+  F ++D  L+E+NPL+    G++  LD K+S D+NA +R  + +
Sbjct: 163 ADIADQVAEVLQTLWTVFIEEDALLVEVNPLVKTGEGKIIALDGKVSLDENAAFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGA-PAN 295
            L D +  +  E  AK   L+Y+ L+G +G + NGAGL M+T+D++      +GG  PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKGLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGG          +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 283 FLDIGGGGPPRGGGNGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGEE 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  PLV+RL+G N ++G +++ ++   ++  +D  D
Sbjct: 343 VTKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMD 378


>gi|312383989|gb|EFR28838.1| hypothetical protein AND_02715 [Anopheles darlingi]
          Length = 225

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 104/172 (60%), Positives = 133/172 (77%)

Query: 222 LDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
           LD+K+ FDDNA +R  D+  LRD+S+ED +E+EA + +L+YIALDG+IGC+VNGAGLAMA
Sbjct: 29  LDAKMRFDDNAEFRQKDLFSLRDLSQEDKKEVEASKFDLNYIALDGSIGCLVNGAGLAMA 88

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           TMDIIKL+GG PANFLDVGGGA    V  AFKIITSD  V  IL+NIFGGIMRCDV+ +G
Sbjct: 89  TMDIIKLHGGDPANFLDVGGGASVKAVKEAFKIITSDPKVHAILVNIFGGIMRCDVIAEG 148

Query: 342 ILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           I+ A KE+ I +P+++RL+G NV+    LI +S L ++   DLD+AA   VH
Sbjct: 149 IIQATKELNIKMPIIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAAMLSVH 200


>gi|242008394|ref|XP_002424991.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
 gi|212508620|gb|EEB12253.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
          Length = 297

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/275 (43%), Positives = 166/275 (60%), Gaps = 16/275 (5%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G  L+TKQTG  G   N V V +     +E Y +++++R+      IAS++GG++IE+
Sbjct: 1   MIGQYLVTKQTGEKGRICNSVMVTERKFPRKEYYFAVMMERSFAGPVIIASSEGGVNIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA + P  I    +D   G+T E    +   + L  +      D+   LY    +KD  L
Sbjct: 61  VAAENPNAIIYEPVDIKKGLTEEQAKKITSAVGLDEEMSTTV-DMLMKLYNLAMEKDALL 119

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +E+NP     NG    LD+K  FDDNA +R  ++ +LRD S+E  R              
Sbjct: 120 VEVNPYAEDVNGGFFCLDAKFRFDDNADFRQKELFDLRDWSQEIRRR------------- 166

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
             +IGC+VNGAGLAMATMDIIKLYGG PANFLDVGGGA    V  AFKIITSD  V  IL
Sbjct: 167 --DIGCLVNGAGLAMATMDIIKLYGGEPANFLDVGGGATASAVKEAFKIITSDPKVHAIL 224

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           +NIFGGIMRCDV+ +GI++A KE+ + +P+++RL+
Sbjct: 225 VNIFGGIMRCDVIAEGIIAAAKELNLVLPIIVRLQ 259


>gi|213579892|ref|ZP_03361718.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 185

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/183 (60%), Positives = 146/183 (79%)

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
           K G L  LD K+  D NAL+R  D++E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVN
Sbjct: 2   KQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVN 61

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAM TMDI+KL+GG PANFLDVGGGA +++V  AFKII SD +VK +L+NIFGGI+R
Sbjct: 62  GAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDNVKAVLVNIFGGIVR 121

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           CD++  GI+ AV+EV +N+P+V+RLEG N ++G + +A+SGLN+I A  L DAAQ++V A
Sbjct: 122 CDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAA 181

Query: 395 VKG 397
           V+G
Sbjct: 182 VEG 184


>gi|209885856|ref|YP_002289713.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
 gi|209874052|gb|ACI93848.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
          Length = 375

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 213/397 (53%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ E+ AK  +L    VP  +G V  +   A +A+  + GP  V+K+Q+  G RGK   
Sbjct: 1   MNLEEHAAKHHVLVPTGVPTPEGRVCKTPEEAAAAVTAI-GP-SVIKAQVPTGKRGK--- 55

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+++  +     S  R+IL  ++        G RV+ V VE    I RELY
Sbjct: 56  -------SGGIKIAKTADEAASAARDILSMSI-------GGHRVSQVLVEQLCPIERELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D  S     + ST+GGMDIEEVA+ +P  I K ++D   G ++ D A++   L L
Sbjct: 102 AAVLIDVASRAPLVLFSTEGGMDIEEVAEKHPDAIRKHVVDIHKGFSAADAAAMLKGLPL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A    G++   LY  F DKD  L+EINPL ++K+GR+  LD K   DD++  R  D+
Sbjct: 162 -GSATEAVGEVLAKLYAIFQDKDAELVEINPLAVLKDGRVVALDCKFVLDDSSALRQPDL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++   ++    E     + L +I LDGN+G + NGAGL M TMD+I  +GG PANFL++
Sbjct: 221 AKVATPAKMTELEQRGADNGLKFIQLDGNVGVLANGAGLTMTTMDVIDHFGGRPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A  ++ S+  VK ++IN  G   R DV+ +G++ A + +K  +P+   +
Sbjct: 281 GGEA-YTKSEIALDLVLSNPGVKSLVINFCGAFARTDVMAEGVVKAWETLKPKVPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D   +L+ E  L +     ++DA +  V A +
Sbjct: 340 HGTGEDEAVKLVRER-LGIEPYDFMEDAVKAAVEAAQ 375


>gi|284173632|ref|ZP_06387601.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus solfataricus 98/2]
 gi|261600984|gb|ACX90587.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus solfataricus 98/2]
          Length = 337

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/396 (36%), Positives = 221/396 (55%), Gaps = 60/396 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  G+V +        IK   G   VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGIVTTE------PIKW--GGKAVVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++                V    VE+     +E Y 
Sbjct: 49  ------RGLVRVTDDVYNTILELKKL---------------GVEKFLVEEFVPHEKEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR S     + S +GG+D+E+ AKD    + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRESAEPMLVLSREGGIDVEQ-AKD----VKKMIIPLERGVRSYDIIEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +I  G     LYK F + D  L+EINPL +  +GRL  LDSK+  +DNAL+RH D+ 
Sbjct: 143 GLGQIIQG-----LYKLFVEYDAELVEINPLALTSDGRLLALDSKVILEDNALFRHEDLL 197

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     +E+  ++ + SY+ LDG+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 198 ----------KELGRQEIHDSYVELDGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  +   + S+  VK ++INI+GGI RCD +  GI+ A+KE+K   P+ +RL 
Sbjct: 248 GGASREHVKESVLKVGSNPKVKKVVINIYGGITRCDEVALGIVDALKEIK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ E+G+NV      DD  + I  AV+
Sbjct: 306 GTNEELGKKILRENGVNV-----YDDVLKMIGDAVR 336


>gi|83699278|dbj|BAE54376.1| succinyl-CoA synthetase beta subunit [Pelotomaculum
           thermopropionicum]
          Length = 369

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/400 (36%), Positives = 212/400 (53%), Gaps = 38/400 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY  K L  KY +PV KG +  +   A      + GP  VVKSQ+  G RGK      
Sbjct: 1   MFEYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIGGPC-VVKSQVLIGKRGKA----- 54

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GG++  +S +       E+   T+        G  V  V VE+   I +ELY+S+
Sbjct: 55  -----GGIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYMSI 102

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS---EDVASLC--DML 177
            VD  + M   IAS  GGMDIEE  ++Y   I K  IDP +G+ +    DV       + 
Sbjct: 103 TVDGAAKMPVLIASAYGGMDIEEQPEEY---IIKKHIDPEMGMQAFIARDVVRQMGISLN 159

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              G+  +    +   LYK F ++D  L+EINPL+   + ++   D+K++ DD+AL+RH 
Sbjct: 160 SAHGKQLVS---IIQTLYKIFKEQDAELVEINPLV-FSDDKVIAADAKVTIDDDALFRHK 215

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+  + D +   + E  AK   LSY+ LDG+I  M NGAG+ M T+D ++ YGG PANFL
Sbjct: 216 DLPYVEDRT---ATEKAAKDLGLSYVELDGDIAVMANGAGITMTTLDTLQYYGGRPANFL 272

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGG  ++  A A +++ + +  K I +NIFGGI RCD +   I    K+  I +P+V+
Sbjct: 273 DCGGGTGREVTAKALELLLTKNP-KVIFVNIFGGITRCDDVANAIADVKKDKGIPMPIVV 331

Query: 358 RLEGANVDIGNRLIAESGLNVITAID-LDDAAQKIVHAVK 396
           RL G N DIG  ++   G   I A D +++AAQK +   K
Sbjct: 332 RLVGTNQDIGREILKGVG---IEAFDFMNEAAQKAIELTK 368


>gi|15668382|ref|NP_247178.1| succinyl-CoA synthetase subunit beta [Methanocaldococcus jannaschii
           DSM 2661]
 gi|2500927|sp|Q57663|SUCC_METJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1590950|gb|AAB98195.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 364

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 219/401 (54%), Gaps = 43/401 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVV-KSQIHAGGRGKGRF 59
           M +HEY+AK + +KY +PV +  ++S     E  + ++     VV K+Q+  GGRGK   
Sbjct: 1   MKLHEYEAKNIFKKYGIPVPESFLVSK----EDDLNSINVDKEVVLKAQVLVGGRGKA-- 54

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+   S+ +  I    E+    +        G +V  + VE+   I +E Y
Sbjct: 55  --------GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYY 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID---PLIGVTSEDVASLCDM 176
           +S+++DR +     I ST+GG+DIEEVA+  P+KI K  ID   P +   +  +     +
Sbjct: 100 VSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKEAKL 159

Query: 177 LELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
              + G+      D+   LYK F + D +++EINPL+I K+G +   D+ +  DD+A +R
Sbjct: 160 PSNEIGKV----ADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFR 215

Query: 236 HLDIQELRDVSEEDSREIEAKQH-NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           H         + E+  E + K+    +Y+ LDG++  + NGAGL +A+MDII   G  PA
Sbjct: 216 H---------NYEEFEEYKNKEKLPFAYVELDGDVAVIGNGAGLTLASMDIINNLGRKPA 266

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
            FLD+GGGAD + V  A + +  + +VKGI INI GGI RCD + KGI+  +KE   N+ 
Sbjct: 267 CFLDIGGGADAETVKLALRKVLENKNVKGIFINILGGITRCDEVAKGIVEVLKE-HPNVK 325

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             +R+ G N +IG +++ E G+   T+  +++A +K++  +
Sbjct: 326 FAVRMMGTNEEIGRKILEEHGIPYETS--MEEAGRKLIEQL 364


>gi|300782733|ref|YP_003763024.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
 gi|299792247|gb|ADJ42622.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
          Length = 389

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/393 (33%), Positives = 219/393 (55%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L   + VPV  G V S+   A++A + + G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFAAHGVPVLPGSVASTPEEAKAAAEHI-GNQVVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G     V V + +DI  E Y 
Sbjct: 57  -------GGVKLAQTPDEAKEKAEAILGLDI-------KGHITRRVLVAEASDIASEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     +AS++GGM+IE++A + P+ + K+ +D + GV       +       
Sbjct: 103 SFLLDRSNRTFLAMASSEGGMEIEQLAVERPEALAKIPVDSITGVDKAKALEILKAGNFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  D+   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +R    +
Sbjct: 163 ADIIDEAADVVVKLWETFVSEDATLVEVNPLVRDPQDKIIALDGKVTLDENADFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
            L D   E+  E +AK  NL+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 ALVDKDAENPLEAKAKAKNLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  +   
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDTDVKSVFVNVFGGITACDAVANGIVEALKILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV  G +++A++   ++T +D  D
Sbjct: 343 PLVVRLDGNNVVEGRQILADANHPLVTVVDTMD 375


>gi|300786451|ref|YP_003766742.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
 gi|299795965|gb|ADJ46340.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
          Length = 380

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 220/397 (55%), Gaps = 33/397 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E++A+ L  K+ VPV +G V +   AA +A   L  P+ V+K+Q+  GGRGK    
Sbjct: 1   MDLFEHEARELFEKHGVPVPRGRVAADPAAARAAAVALGAPV-VIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  +         +ILG  +        G RV+ V V + ++I  E YL
Sbjct: 57  -------GGVRVVHTADDAEQAADDILGMDI-------KGHRVHRVLVTEASEIADEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR       +AS +GGMDIEEVA   P  + ++ +DPL G+   D  ++       
Sbjct: 103 SFLLDRAGRTFLAMASAEGGMDIEEVAATRPDALVRVPVDPLAGI---DATAVAAAFPAD 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A + G  +   L++ F  +D +L+E+NPL +   G +  LD KI+ DDNA +R     
Sbjct: 160 VRAEVAG--VVEKLWEVFAAEDCTLVEVNPLALTATG-IVALDGKITLDDNAAFRRS--S 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGAPANF 296
              D S+ D  E EA+   L+Y+ LDG+IG + NGAGL M+T+D++    +     PANF
Sbjct: 215 AFDDTSDGDPLEREARAKGLNYVKLDGDIGVIGNGAGLVMSTLDVVAAAAEAGARGPANF 274

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA    +     +I  D  V+ + +N+FGGI  CD +  GI+ +V+ +  +   P
Sbjct: 275 LDIGGGASAQVMVDGLTVILGDPQVRSVFVNVFGGITACDAVATGIVRSVEVLGSRATKP 334

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
           LV+RL+G NV  G R++AE+   ++T +  +DDAA++
Sbjct: 335 LVVRLDGNNVTEGRRILAEAAHPLVTVVATMDDAARE 371


>gi|229817638|ref|ZP_04447920.1| hypothetical protein BIFANG_02908 [Bifidobacterium angulatum DSM
           20098]
 gi|229785427|gb|EEP21541.1| hypothetical protein BIFANG_02908 [Bifidobacterium angulatum DSM
           20098]
          Length = 397

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/401 (32%), Positives = 212/401 (52%), Gaps = 31/401 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  KG+   + H    A + L  P  VVK+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQGIPTPKGIYAQNSHEVAEAAEKLGYP-NVVKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    EIL  T+          +VN V V +G +IL E Y+
Sbjct: 57  -------GGVKLAKTRDEAILASEEILPMTI-------HNHKVNGVLVAEGKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L I+ L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIEALADFDMEAARKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                   D+   +++ F + D +L+EINPL  +       +  L  LD+KIS DDNA +
Sbjct: 163 HADVDQAADILLKMWRCFKENDATLVEINPLAKIGDPDDESSKMLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E  AK+H L Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFDDPMANDELERRAKEHGLHYVHLHGQVGVIGNGAGLVMSSLDAVSGAGEDLG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +AA+  I+ SD  VK + IN++GGI  C+ + +GIL A++ 
Sbjct: 283 SNVKPANFLDIGGGASAEVMAASLGIVLSDPQVKSVFINVYGGITSCEQVAQGILEALES 342

Query: 349 VKINIPLVMRLEGANVDIGNRLI-AESGLNVITAIDLDDAA 388
           +    P+++R +G     G  ++ A +  N+  A  +++AA
Sbjct: 343 LPSVKPIIVRFDGNAAAEGLSILGASNNPNIHVASTMEEAA 383


>gi|10640675|emb|CAC12453.1| probable succinyl-CoA synthetase, beta subunit [Thermoplasma
           acidophilum]
          Length = 376

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 214/384 (55%), Gaps = 32/384 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N++EY  K + R+Y +PV  G V+SSV      ++ L  P+  VKSQI  GGRGK    
Sbjct: 12  LNLYEYMGKDIFRQYGIPVPNGYVVSSV----DEVRKLTNPV-AVKSQILLGGRGKA--- 63

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + + +   ++ +LG+ +           V  V +ED  +I  E Y+
Sbjct: 64  -------GGIKFAKTDQELKDAVKALLGAKV-------RNLTVTKVLIEDMLNIKHEYYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R++     IAS  GG++IE V     +KIFK +IDP +G +          + L 
Sbjct: 110 SITLNRSARAPTVIASAMGGVEIETVPD---EKIFKRIIDPSLGYSDFIGREASTFMGLS 166

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH--LD 238
                   DL   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A++RH   +
Sbjct: 167 PDLSKQFLDLLKKLYNVYKGEDAELVEINPLVETNDGKLIAADAKVVIDSDAMFRHREFN 226

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQ+     E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFLD
Sbjct: 227 IQD----PEKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFLD 282

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GG  + D V  AF ++  ++  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+R
Sbjct: 283 LGGTDNVDIVVNAFDLVL-EAKPKAILVNIFGGVTKCDTVAQGIVDAKKKFDIKIPIVVR 341

Query: 359 LEGANVDIGNRLIAESGLNVITAI 382
           L G + + G +++ E+G+   + +
Sbjct: 342 LSGIHEEEGRQILKENGIEAFSEM 365


>gi|119629180|gb|EAX08775.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_a
           [Homo sapiens]
          Length = 193

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 103/171 (60%), Positives = 135/171 (78%)

Query: 222 LDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
           +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMA
Sbjct: 1   MDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMA 60

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           TMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +G
Sbjct: 61  TMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQG 120

Query: 342 ILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           I+ AVK+++I IP+V+RL+G  VD    LIA+SGL ++   DLD+AA+ +V
Sbjct: 121 IVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 171


>gi|289191514|ref|YP_003457455.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus sp.
           FS406-22]
 gi|288937964|gb|ADC68719.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus sp.
           FS406-22]
          Length = 364

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 219/403 (54%), Gaps = 47/403 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           M +HEY+AK + +KY +PV    ++S    +++ E   +       V+K+Q+  GGRGK 
Sbjct: 1   MKLHEYEAKNIFKKYGIPVPNSFLVSKGDDLNSIEIDREV------VLKAQVLVGGRGKA 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GG+   S+ +  I    E+    +        G +V  + VE+   I +E
Sbjct: 55  ----------GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKE 97

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID---PLIGVTSEDVASLC 174
            Y+S+++DR +     I ST+GG+DIEEVA+  P+KI K  +D   P +   +  +    
Sbjct: 98  YYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHVDVKKPFLPYVARWIVKEA 157

Query: 175 DMLELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
            +   + G+      D+   LYK F + D +++EINPL+I ++G +   D+ +  DD+A 
Sbjct: 158 KLPSNEIGKV----ADVIYKLYKIFKELDATMVEINPLVITEDGNVYAADAVLHLDDDAA 213

Query: 234 YRHLDIQELRDVSEEDSREIEAKQH-NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           +RH         + E+  E + K+    +Y+ LDG++  + NGAGL +A+MD+I   G  
Sbjct: 214 FRH---------NYEEFEEYKNKEKLPFAYVELDGDVAVIGNGAGLTLASMDVINNLGRK 264

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PA FLD+GGGAD + V  A + +  + +VKGI INI GGI RCD + KGI+  +KE   N
Sbjct: 265 PACFLDIGGGADAETVKLALRKVLENKNVKGIFINILGGITRCDEVAKGIVEVLKE-HPN 323

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I   +R+ G N DIG +++ E G+   T+  +++A +K++  +
Sbjct: 324 IKFAVRMMGTNEDIGRKILEEHGIPYETS--MEEAGRKLIEQL 364


>gi|239927749|ref|ZP_04684702.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291436089|ref|ZP_06575479.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291338984|gb|EFE65940.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
          Length = 376

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 200/371 (53%), Gaps = 23/371 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARQLFAEHGIVVPRAEVTDSPKRAREIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGMDI-------KGHTVGTVMLAQPVDIAEEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS QGG +IEEVA   P+ + ++ +DP  GVTS   A + +   L 
Sbjct: 103 SYVLDRAAGRFLAIASAQGGTEIEEVAATRPEAVARVPVDPAEGVTSATAARIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q      D+   L++    +D  L+E+NPL+   +GR+  LD K++ DDNA +RH    
Sbjct: 163 PQTV----DVLVRLWEVLTREDALLVEVNPLVRTGDGRIMALDGKVTLDDNARFRHAPWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D ++ D  E  A    L Y+ LDG +G + NGAGL M+T+D +   G  PANFLD+G
Sbjct: 219 G-EDSADADPLEAAAAAKGLHYVKLDGEVGVIGNGAGLVMSTLDAVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    ++ SD +V+ +L+N+FGGI  CD +  GI+ A+  V+   PLV+RL+
Sbjct: 278 GGASAQVMADGLSVVLSDPAVRSVLVNVFGGITACDAVADGIVRALDAVRPTKPLVVRLD 337

Query: 361 GANVDIGNRLI 371
           G N   G  ++
Sbjct: 338 GNNAARGQAVL 348


>gi|154150270|ref|YP_001403888.1| succinyl-CoA synthetase, beta subunit [Candidatus Methanoregula
           boonei 6A8]
 gi|153998822|gb|ABS55245.1| succinyl-CoA synthetase, beta subunit [Methanoregula boonei 6A8]
          Length = 361

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 212/385 (55%), Gaps = 35/385 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK L  +  + V KG+++         +  +P  +  VK+Q+  GGRGK    
Sbjct: 1   MKLLEYEAKQLFSEEGIRVPKGILVGKHEEILLHMDAIPAKV-AVKAQVDVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV + +   +VI   R++  +T+        G  V  + +E+  +I  E Y+
Sbjct: 57  -------GGV-LMADRDTVIETARKLFNTTI-------KGLPVQRILIEERLEIRHEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DRT      + +  GG+DIEE AK   + I  +   PL+     DV     + EL 
Sbjct: 102 SITIDRTKKQPVILFAETGGIDIEETAKTDKKAIRSISFCPLLA----DVPGFL-LRELC 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A ++       LY  FC KD  L EINPL+    G +   D+K+  DDN+L R   I 
Sbjct: 157 GDAPVEIQATVNRLYHVFCHKDALLAEINPLVTTPAG-VYAADAKLIIDDNSLARQ-GIV 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD++E   RE EA++H  SY+ L GNIG + NGAGL MAT+D+I+ YGG  A+FLDVG
Sbjct: 215 LNRDLTE---REREAEKHGFSYVELQGNIGVIGNGAGLTMATLDLIEYYGGRAADFLDVG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL-SAVKEVKINIPLVMRL 359
           GGAD ++V  A ++++   +VK I++N+ GGI RCD + +GI+ S V E     P+++R+
Sbjct: 272 GGADSERVMHAVRLVSGVPTVKVIVVNLLGGITRCDEVARGIIASGVPE-----PVIVRI 326

Query: 360 EGANVDIGNRLIAESGLNVITAIDL 384
            G N + G +L+AE G  ++  +DL
Sbjct: 327 AGTNAEEGRKLLAEKGYEMLDTMDL 351


>gi|29828360|ref|NP_822994.1| succinyl-CoA synthetase subunit beta [Streptomyces avermitilis
           MA-4680]
 gi|29605463|dbj|BAC69529.1| putative succinyl-CoA synthetase beta subunit [Streptomyces
           avermitilis MA-4680]
          Length = 376

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/372 (34%), Positives = 203/372 (54%), Gaps = 25/372 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L   + + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFADHGILVPRAEVTDSSQEARVIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V  V + +  DI  E Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGMDI-------KGHTVGKVMLAEPVDIEAEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS +GGM+IEEVA   P+ + ++ +DP  GVTS   A + +   L 
Sbjct: 103 SYVLDRAAGRFLAIASAEGGMEIEEVAATRPEAVARVPVDPAEGVTSAKAAEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A +D   +   L++    +D  L+E+NPL+    G++  LD K++ DDNA +R    +
Sbjct: 163 -PATVD---VLVRLWEVLLREDAVLVEVNPLVRTAQGQILALDGKVTLDDNARFRQ--TR 216

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              + +E  D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+
Sbjct: 217 WGAEAAEHGDQLEAAAAAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDI 276

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA    +A    +I SD +VK + +N+FGGI  CD +  GI+ A+  V++  PLV+RL
Sbjct: 277 GGGASAQIMADGLSVILSDPAVKSVFVNVFGGITACDAVADGIVQALDTVRLTKPLVVRL 336

Query: 360 EGANVDIGNRLI 371
           +G N   G  ++
Sbjct: 337 DGNNAARGRAIL 348


>gi|297670915|ref|XP_002813597.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like, partial [Pongo abelii]
          Length = 354

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/326 (40%), Positives = 178/326 (54%), Gaps = 28/326 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   +YK             PL     G +   D+KI+FDDNA +R  DI 
Sbjct: 215 G-------PLKSQVYK-------------PL-----GDVVCFDAKINFDDNAEFRQKDIF 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 250 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI 326
           GG  + +V  AFK++T+D  V  + +
Sbjct: 310 GGVKEAQVYQAFKLLTADPKVTFLFV 335


>gi|13541105|ref|NP_110793.1| succinyl-CoA synthetase subunit beta [Thermoplasma volcanium GSS1]
          Length = 365

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/385 (35%), Positives = 212/385 (55%), Gaps = 34/385 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + R+Y +PV  G V+SS       +K    P+  VKSQI  GGRGK    
Sbjct: 1   MNLYEYMGKDIFREYGIPVPNGYVVSS----PQDVKKFTNPV-AVKSQILLGGRGKA--- 52

Query: 61  ELPADSKGGVR---VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                  GG++    +  LK+ +S     L ST +   T      V  V +ED  +I  E
Sbjct: 53  -------GGIKFAKTDEELKNAVS----TLLSTKVRNMT------VTKVLIEDMLNIKHE 95

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+S+ ++R +     IAS  GGM+IE V  D   KIFK +IDP +G +          +
Sbjct: 96  YYVSIALNRAAKSPMLIASAMGGMEIENVPDD---KIFKRIIDPSLGYSDFIGREASQFM 152

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L  +      D+   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A+YRH 
Sbjct: 153 GLPPELSKQFLDILKKLYNVYRGEDCELVEINPLVETGDGKLIAADAKVVIDSDAIYRHR 212

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +   ++D  E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFL
Sbjct: 213 EFS-IQD-PEKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFL 270

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GG  + D V  AF ++  ++  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+
Sbjct: 271 DLGGTDNVDIVINAFDLVL-EAKPKAILVNIFGGVTKCDTVAQGIVEAKKKFDIKIPVVV 329

Query: 358 RLEGANVDIGNRLIAESGLNVITAI 382
           RL G +   G +++ ++G+   + +
Sbjct: 330 RLSGVHEVEGRKILQDNGIEAFSEM 354


>gi|257051525|ref|YP_003129358.1| succinyl-CoA synthetase subunit beta [Halorhabdus utahensis DSM
           12940]
 gi|256690288|gb|ACV10625.1| succinyl-CoA synthetase, beta subunit [Halorhabdus utahensis DSM
           12940]
          Length = 381

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 194/364 (53%), Gaps = 19/364 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +  +PV    + ++V  A  A   +  P+  +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKRVFAEAGIPVPDATLATTVEEAVDAAGEIGFPV-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++            +ILG  L        G  V+ V VE   D + ELY+
Sbjct: 57  -------GGIKLAEDADEAREAATDILGMDL-------KGYTVDRVLVEQAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +G    + ST+GG++IEEVA + P  I +  +DP  G+             + 
Sbjct: 103 GVTMDRGAGKPVAMVSTKGGVNIEEVAAENPDAIAREHVDPAYGLHPYQARKAVYDAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY  + +KD S  EINP++I  +  +   D+  + DD+AL+R  +I 
Sbjct: 163 REVAGDVASILSTLYDLWDEKDGSDAEINPVMITDDDEVIAADAVFNVDDDALFRQSEIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L   + +D  E  A ++   Y+ L GN+G + NGAGL M T+D++  YGG+PANFLD+G
Sbjct: 223 QLEGETTDDDLEAMANEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDHYGGSPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA   +V  A +++ +D +V  ++ NIFGGI R D + +GI  A++E   I  P+ +RL
Sbjct: 283 GGAKAGRVRNALEVVFADDNVDSVVFNIFGGITRGDEVARGINEALEEFDTIPNPVTVRL 342

Query: 360 EGAN 363
            G N
Sbjct: 343 AGTN 346


>gi|308803324|ref|XP_003078975.1| succinyl CoA ligase beta subunit (ISS) [Ostreococcus tauri]
 gi|116057428|emb|CAL51855.1| succinyl CoA ligase beta subunit (ISS) [Ostreococcus tauri]
          Length = 261

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 103/167 (61%), Positives = 135/167 (80%)

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DNA YR  +   LRD S+ED+RE++A + +L+YI LDGNIGCMVNGAGLAMATMDII+LY
Sbjct: 95  DNAEYRQRETFALRDHSQEDAREVQAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIIQLY 154

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG+PANFLDVGG A +++V  AFKI+T+D  VK IL+NIFGGIM+CDV+  GI++A K+V
Sbjct: 155 GGSPANFLDVGGNASEEQVVEAFKILTADPKVKAILVNIFGGIMKCDVIAAGIVAAAKQV 214

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            + +PL++RLEG NV+ GN +++ S L +ITA DLDDAAQK   ++K
Sbjct: 215 DLRVPLIVRLEGTNVEAGNAILSSSDLTIITASDLDDAAQKACASLK 261


>gi|299134897|ref|ZP_07028089.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
 gi|298590707|gb|EFI50910.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
          Length = 375

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/397 (34%), Positives = 212/397 (53%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ EY AK  +L    VP  +G V  +   A +A+  + GP  V+K+Q+  G RGK   
Sbjct: 1   MNLEEYAAKHHVLVPAGVPTPEGRVCKTPEEAAAAVTAI-GP-SVIKAQVPTGKRGK--- 55

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+++  +     S  R+IL  ++        G RV+ V VE    I RELY
Sbjct: 56  -------SGGIKIAKTADEAASAARDILSMSI-------GGHRVSQVLVEQLCPIERELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D  S     + ST+GGMDIEEVA+ +P  I K ++D   G ++ D A++   L L
Sbjct: 102 AAVLIDVASRAPLVLFSTEGGMDIEEVAETHPDAIRKHIVDIHKGFSAADAAAMLKGLPL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A     ++   LY  F  KD  L+EINPL ++K+GR+  LD K   DD++  R  D+
Sbjct: 162 -GSAAGAVSEVLAKLYAIFDAKDAELVEINPLALLKDGRVVALDCKFVLDDSSGLRQPDL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++    +  + E    ++ L +I LDGN+G + NGAGL M TMD+I  +GG PANFL++
Sbjct: 221 AKVASPPKMTALEERGAENGLKFIQLDGNVGVLANGAGLTMTTMDVIDHFGGKPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A  ++ S+  VK ++IN  G   R DV+ +G++ A + +K  +P+   +
Sbjct: 281 GGEA-YTKSEIALDLVLSNPGVKSLVINFCGAFARTDVMAEGVVKAWETLKPKVPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D   +L+ E  L +     ++DA +  V A +
Sbjct: 340 HGTGEDEAVKLVRER-LGIEPYDFMEDAVKAAVEAAQ 375


>gi|261403710|ref|YP_003247934.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus vulcanius
           M7]
 gi|261370703|gb|ACX73452.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus vulcanius
           M7]
          Length = 364

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 216/399 (54%), Gaps = 43/399 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAGGRGKGRF 59
           M +HEY+AK + +KY +PV +  +IS     E  + ++      V+K+Q+  GGRGK   
Sbjct: 1   MKLHEYEAKNIFKKYGIPVPESFLISK----EDDLNSINIDKEVVLKAQVLVGGRGKA-- 54

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+   S+    I    E+    +        G +V  + VE+   I +E Y
Sbjct: 55  --------GGILFASNKGEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYY 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID---PLIGVTSEDVASLCDM 176
           +S+++DR +     I ST+GG+DIEEVA+  P+KI K  ID   P +   +  +     +
Sbjct: 100 VSIIIDRDAKKPVIIFSTEGGVDIEEVAEKNPEKIIKYYIDIKKPFLPYITRWIVKDAKL 159

Query: 177 LELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
              + G+      D+   LYK F + D +++EINPL+I KNG +   D+ +  DD+A ++
Sbjct: 160 PSNEIGKV----ADVIYKLYKIFKELDATMVEINPLVITKNGDVYAADAVLHLDDDASFK 215

Query: 236 HLDIQELRDVSEEDSREIEAKQH-NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           H         + E   E + K+    +Y+ L+G++  + NGAGL +A+MDII   G  PA
Sbjct: 216 H---------NYEGFEEYKNKEKLPFAYVELEGDVAVIGNGAGLTLASMDIINNLGRKPA 266

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
            FLD+GGGA+ + V  A K +  + +VKGI INI GGI RCD + KGI+  +KE   NI 
Sbjct: 267 CFLDIGGGAEAETVKLALKKVLENKNVKGIFINILGGITRCDEVAKGIVDVLKE-HPNIK 325

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
             +R+ G N +IG +++ E G+   T+  +++A +K++ 
Sbjct: 326 FAVRMMGTNEEIGRKILEEHGIPYETS--MEEAGRKLIE 362


>gi|218904964|ref|YP_002452798.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           AH820]
 gi|218538744|gb|ACK91142.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           AH820]
          Length = 169

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 100/155 (64%), Positives = 127/155 (81%)

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 14  ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 73

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 74  GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 133

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 134 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 168


>gi|284165339|ref|YP_003403618.1| succinyl-CoA synthetase subunit beta [Haloterrigena turkmenica DSM
           5511]
 gi|284014994|gb|ADB60945.1| succinyl-CoA synthetase, beta subunit [Haloterrigena turkmenica DSM
           5511]
          Length = 384

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/396 (34%), Positives = 217/396 (54%), Gaps = 24/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P     + S V  A +A + +  P+  +K+Q+  GGRGK    
Sbjct: 3   MKLHEYQAKQVFADAGIPTPASELASDVDGAVAAAEEIGYPV-AIKAQVQVGGRGKA--- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++            EILG  L        G  V+ V VE+  D   ELY+
Sbjct: 59  -------GGIKLVEDEDEAREAADEILGMDL-------KGYHVDRVLVEEAVDFTNELYV 104

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCDMLEL 179
            + +DR  G    + ST+GG++IEEVA++ P  I +  IDP  G+       ++ D    
Sbjct: 105 GITMDRGEGKPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPYQARKAVYDAGVD 164

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           Q  AR D   +   LY+ + D+D S  EINPL++  +  +   D+ ++ D++AL+R  ++
Sbjct: 165 QSIAR-DVSSVLTTLYQLWDDRDGSDAEINPLMVTSDDEVIAADAVMNIDEDALFRQPEL 223

Query: 240 QELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            E+ + +   D  E +A +++  Y+ LDGN+G + NGAGL M T+D++  YGG PANFLD
Sbjct: 224 AEMEEEAAGGDELEQKADEYDFDYVRLDGNVGIIGNGAGLVMTTLDLVDHYGGEPANFLD 283

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVM 357
           VGGGA  +++A A  ++ SD +V  ++ NIFGGI R D + +GI  A+++  +I  P+V+
Sbjct: 284 VGGGAKAERIANALDMVFSDDNVDSVVFNIFGGITRGDEVARGINEALEQFDEIPKPVVV 343

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RL G N + G  ++ E  + V     L+DA Q+ V 
Sbjct: 344 RLAGTNWEEGMEILNEDLVTVEQT--LEDAVQRAVE 377


>gi|45358668|ref|NP_988225.1| succinate-CoA ligase (ADP-forming), beta chain [Methanococcus
           maripaludis S2]
 gi|45047534|emb|CAF30661.1| succinate-CoA ligase (ADP-forming), beta chain [Methanococcus
           maripaludis S2]
          Length = 362

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 221/387 (57%), Gaps = 41/387 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++ N+P+ K  ++S        ++++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENNIPIPKNKLVSG------KVESIDYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    ++      I  ++G+T+        G  V  V +E+   I++E Y+
Sbjct: 51  -------GGILFADNVDDANEKIESLIGNTV-------KGELVEKVLLEEQIKIVKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLEL 179
            ++V+R       I ST+GG+DIEEVA   P+KI KL ++P      E +  L   ML+ 
Sbjct: 97  GVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLSLNP----EKEFLPYLARGMLKK 152

Query: 180 QG--QARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            G   A I    D+   +YKAF + D  L EINPL+  ++G++   D+ ++ DD+A +RH
Sbjct: 153 AGIPSAEIPKVADVLCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNVDDDAYFRH 212

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            + ++  + ++++  E        +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA F
Sbjct: 213 -NYEKFEEFNKQEKSE-------FAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACF 264

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGG++++ V  A    TS  +VKG  INI GGI RCD +  GI+  +KE   N+   
Sbjct: 265 LDVGGGSNRETVKKALLKATSRKNVKGAFINILGGITRCDEVSMGIVDVLKE-NPNLKFA 323

Query: 357 MRLEGANVDIGNRLIAESGLNVITAID 383
           +R+ G N + G R+++E+G++  ++++
Sbjct: 324 VRMMGTNEEEGRRILSENGISFESSME 350


>gi|326334136|ref|ZP_08200363.1| succinyl-CoA synthetase, beta subunit [Nocardioidaceae bacterium
           Broad-1]
 gi|325948112|gb|EGD40225.1| succinyl-CoA synthetase, beta subunit [Nocardioidaceae bacterium
           Broad-1]
          Length = 387

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 220/402 (54%), Gaps = 34/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ V V +GVV+ +   A  A + +     VVK+Q+ A         
Sbjct: 1   MDLMEYQAKKLFAKHGVAVTEGVVVETAEEARKAAEEIG--FCVVKAQVKA--------- 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G +VN V +      + E Y 
Sbjct: 50  -GGRGKAGGVKLAKTADEAFEHASNILGMEI-------KGLKVNRVLITPATPPVEEYYF 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV---TSEDVASLCDML 177
           S L+DR++     IAS +GG++IEEVAK  P  + ++ IDP  GV    + ++A+ C   
Sbjct: 102 SFLLDRSNRQYLCIASVEGGVEIEEVAKTNPDAVKQIGIDPGKGVDEAKAREIATECGFP 161

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRH 236
           E   +  +    +  +LY  F ++D +L+E+NPL  ++  +L  LD K+S DDNA   RH
Sbjct: 162 EPVFEQAVS---MIQSLYTVFTEEDATLVEVNPLARLEGDKLEALDGKVSLDDNASEVRH 218

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA---- 292
            D ++     EED  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G A    
Sbjct: 219 EDHEQFVIRDEEDPLEAKAKDKGLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEAHGGV 278

Query: 293 -PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLD+GGGA+   +A    +I +D  VK + +N+FGGI  CD + KGI+ A+  +  
Sbjct: 279 KPANFLDIGGGANAQVMADGLDVILNDEQVKSVFVNVFGGITACDEVAKGIVGALDILGN 338

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           +   PLV+RL+G NVD+G ++++E+   ++T +D +D  A K
Sbjct: 339 EATKPLVVRLDGNNVDLGRQILSEANHPLVTIVDTMDGGADK 380


>gi|295698453|ref|YP_003603108.1| succinyl-CoA synthetase beta chain [Candidatus Riesia pediculicola
           USDA]
 gi|291157079|gb|ADD79524.1| succinyl-CoA synthetase beta chain [Candidatus Riesia pediculicola
           USDA]
          Length = 396

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 213/405 (52%), Gaps = 20/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EYQ K +L      V KG    ++    +AI  L   ++V+K QI +GGR K    
Sbjct: 1   MYLYEYQVKRMLFLSGFLVPKGFFCQTIEEVRNAIFQLNQKIFVLKCQIQSGGRKKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G + + S++K       + +   LIT QT   G  V  + VE+   I +E Y 
Sbjct: 58  -------GAIEIVSNIKEAELFFFKWMNKKLITNQTNSGGQLVIGILVEEHVSIKKETYA 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D+    +  I S+ GG ++E+  ++  +   K+ IDP+  +T   +    D L  Q
Sbjct: 111 SISLDKNDKQIMLIFSSSGGTEVEKYHRNCKKLFRKIEIDPIKKLTLNILEKHVDNLGYQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L   F   D+  +EINP+ I K GR   LD K + D NA +R  +++
Sbjct: 171 KKEGKFFSKFLIKLLNMFFYLDLLFVEINPIAIDKKGRFFCLDGKSNMDCNAFFRKKELK 230

Query: 241 ELRDVSEEDSREIEAKQHNL----SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             +++ + DS+ I+ ++  L    +Y+ L GNIGC+ NGAGLAMATMD+IK+YGG PANF
Sbjct: 231 --KNILKFDSK-IDNEKFKLYEPSNYVLLKGNIGCIANGAGLAMATMDLIKIYGGNPANF 287

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI--P 354
           LD+GG  D   + +    +    +V  ILINIFGGI+RC+++ + ++ ++K+++      
Sbjct: 288 LDIGGNTDLSGMKSYIHKVLVQKNVNVILINIFGGIVRCEIVAEALIQSLKDIQNECFPK 347

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQKIVHAVKGV 398
           +++RL G     G   I +SG N I  +D L+   ++ VH  K V
Sbjct: 348 ILIRLSGNGYQSGINYIEKSGFNNIFVMDNLEKMVKRSVHLAKNV 392


>gi|14324489|dbj|BAB59417.1| succinyl-CoA synthetase beta subunit [Thermoplasma volcanium GSS1]
          Length = 384

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/385 (34%), Positives = 212/385 (55%), Gaps = 34/385 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N++EY  K + R+Y +PV  G V+SS       +K    P+  VKSQI  GGRGK    
Sbjct: 20  LNLYEYMGKDIFREYGIPVPNGYVVSS----PQDVKKFTNPV-AVKSQILLGGRGKA--- 71

Query: 61  ELPADSKGGVR---VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                  GG++    +  LK+ +S     L ST +   T      V  V +ED  +I  E
Sbjct: 72  -------GGIKFAKTDEELKNAVS----TLLSTKVRNMT------VTKVLIEDMLNIKHE 114

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+S+ ++R +     IAS  GGM+IE V  D   KIFK +IDP +G +          +
Sbjct: 115 YYVSIALNRAAKSPMLIASAMGGMEIENVPDD---KIFKRIIDPSLGYSDFIGREASQFM 171

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L  +      D+   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A+YRH 
Sbjct: 172 GLPPELSKQFLDILKKLYNVYRGEDCELVEINPLVETGDGKLIAADAKVVIDSDAIYRHR 231

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +   ++D  E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFL
Sbjct: 232 EFS-IQD-PEKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFL 289

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GG  + D V  AF ++  ++  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+
Sbjct: 290 DLGGTDNVDIVINAFDLVL-EAKPKAILVNIFGGVTKCDTVAQGIVEAKKKFDIKIPVVV 348

Query: 358 RLEGANVDIGNRLIAESGLNVITAI 382
           RL G +   G +++ ++G+   + +
Sbjct: 349 RLSGVHEVEGRKILQDNGIEAFSEM 373


>gi|146304345|ref|YP_001191661.1| succinyl-CoA synthetase subunit beta [Metallosphaera sedula DSM
           5348]
 gi|145702595|gb|ABP95737.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Metallosphaera
           sedula DSM 5348]
          Length = 337

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 206/378 (54%), Gaps = 55/378 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K L    N+PV +G V+ S    +  +        VVKSQ+  GGRGK    
Sbjct: 1   MKLYEYEGKRLFSLVNIPVPRGQVVKSPVHVQGKV--------VVKSQLLEGGRGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV       I ++ +                 +N   +E+     RE+YL
Sbjct: 49  ------RGLVRVTEDSYGTIQELMK---------------EGINTFLIEEFVPHTREIYL 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    +AS  GG++IEE +KD   K F + ID  +     DV ++   +  +
Sbjct: 88  SAMMDRETGNPMIVASPFGGINIEE-SKDV--KTFVIPIDRKL--MRYDVDAIEKYVGYR 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   L +   + D  L EINPL I +NG L  LDSK+  DDNALYRH ++ 
Sbjct: 143 GL-----GGVIEGLLRLILEYDAELAEINPLAITENGPL-ALDSKVILDDNALYRHEEL- 195

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  E       K    SY+ L+G++G + NGAGL MATMD++KL GG PA+FLDVG
Sbjct: 196 -LKELQRE-------KVPADSYVELEGDVGIVGNGAGLTMATMDLVKLMGGNPADFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +KVA+A   + S+  VK I+INIFGGI RCD + KGI+ A +  KIN P+ +RL 
Sbjct: 248 GGADTEKVASAVIRVGSNPKVKKIVINIFGGITRCDEVAKGIVEAYR--KINKPIYVRLT 305

Query: 361 GANVDIGNRLIAESGLNV 378
           G N D G +++   G+ V
Sbjct: 306 GTNEDEGKKILQSQGIRV 323


>gi|289705453|ref|ZP_06501847.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
 gi|289705919|ref|ZP_06502297.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
 gi|289557365|gb|EFD50678.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
 gi|289557838|gb|EFD51135.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
          Length = 342

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 194/347 (55%), Gaps = 25/347 (7%)

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           GGRGK           GGV+V  +        + ILG  +        G  V+ V +  G
Sbjct: 4   GGRGKA----------GGVKVAKTADEAYEHAKAILGMDI-------KGHTVHQVMIAQG 46

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           ADI  E Y S+L+DR +     + S +GGM+IE++A++ P+ + K+ +  L G+ +E   
Sbjct: 47  ADIAEEYYFSVLLDRANRTYLAMCSVEGGMEIEQLAEERPEALAKVPVSALTGIDAETAQ 106

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +        + R D  ++   L++ F  +D +L+E+NPL+   +G +  LD K+S DDN
Sbjct: 107 KIVTEAGFPEELRADVAEVIQKLWEVFEKEDATLVEVNPLVKTGDGTILALDGKVSLDDN 166

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----K 287
           A +RH     L D   ED  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++    +
Sbjct: 167 AQFRHEGHAALVDERTEDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGE 226

Query: 288 LYGGA-PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
            +GG  PANFLD+GGGA+ + +A    +I  D  VK + +N+FGGI  CD +  GI+ A+
Sbjct: 227 QHGGVKPANFLDIGGGANAEVMANGLDVILGDEQVKSVFVNVFGGITACDQVANGIVKAL 286

Query: 347 KEV--KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           + +      PLV+RL+G  V+ G R++ E+   ++T A  +D+ A K
Sbjct: 287 EILGDTATKPLVVRLDGNAVEEGRRILQEANHPLVTLAATMDEGADK 333


>gi|238490800|ref|XP_002376637.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
 gi|220697050|gb|EED53391.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
          Length = 339

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 171/310 (55%), Gaps = 27/310 (8%)

Query: 36  KTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQ 95
           K   G   V+K+QI AGGRGKG++    +D KGGVR+  S      +   +LG +L+TKQ
Sbjct: 28  KGTSGAPSVMKAQILAGGRGKGKYN---SDGKGGVRIVDSPDEAFENASNMLGYSLVTKQ 84

Query: 96  TGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF 155
           T P G  VN +Y+    DI +E Y+++  DR       + S  GG++IE       +  F
Sbjct: 85  TPPDGLPVNKLYIYKSVDIAQEFYVAITFDRARYKPVLLMSDDGGVNIESNVNQLQRFWF 144

Query: 156 KL----------LIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
            L           I+   G + +D+  +  +L                L K F +KD +L
Sbjct: 145 NLSTGITPEIAAYIEAQFGFSDDDMGMVTHILR--------------QLVKLFREKDATL 190

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LE+NP +    G L  +D+K +FDD+A +R  ++  L + S E+  E EA Q  LSYI L
Sbjct: 191 LELNPFVRTTEGSLICIDAKFNFDDSAKFRQPELVSLVEHSAEEKDEYEASQLGLSYIRL 250

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIG +VNGAGLAMAT D++ LYGG  ANFLD+GGGA ++ ++ AF I+  DS  K + 
Sbjct: 251 DGNIGVIVNGAGLAMATNDLVTLYGGNCANFLDIGGGATKETLSNAFSILQGDSRTKALF 310

Query: 326 INIFGGIMRC 335
           INI+GG  R 
Sbjct: 311 INIYGGRKRT 320


>gi|296140992|ref|YP_003648235.1| succinyl-CoA synthetase subunit beta [Tsukamurella paurometabola
           DSM 20162]
 gi|296029126|gb|ADG79896.1| succinyl-CoA synthetase, beta subunit [Tsukamurella paurometabola
           DSM 20162]
          Length = 387

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 214/398 (53%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A +  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTTPGRVTDTAADARAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAPTADDAQTHSENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GG++IE  A++ P  + K+ ID   GV       + +  +L 
Sbjct: 103 SFLLDRANRTHLAMCSVEGGVEIEVTAEENPDALAKVAIDATKGVDLALAREIAEKGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ +  +D +L+E+NPL+   + ++  LD K++ D+NA +RH +  
Sbjct: 163 AEVLDAAAVTIQKLWEVYVGEDATLVEVNPLVRTPDDQILALDGKVTLDENADFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 223 AFADAGSTDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+  +    + 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALNTLGDTASK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           PLV+RL+G  V+ G  ++A +   ++T A  +D+ A K
Sbjct: 343 PLVVRLDGNKVEEGRAILAAANHPLVTLAQTMDEGADK 380


>gi|15679054|ref|NP_276171.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|6647835|sp|O27115|SUCC_METTH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|2622139|gb|AAB85532.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 365

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/396 (34%), Positives = 212/396 (53%), Gaps = 33/396 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M  +EY AK + R   +   +G V  +   AE     L G    VKSQ+  GGRGK    
Sbjct: 1   MKFYEYSAKEIFRAEGISTPRGGVAETPEEAERIAAEL-GCDVAVKSQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  S      S + E+ G  L ++  G T   V  V +E+   I RELY+
Sbjct: 57  -------GGIRFASP-----SGVAEVTGDLLSSEVRGET---VEKVLIEEKIPIDRELYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DRT+ M   +AS +GG+DIEE+A   P+KI +  I+PL      +   +   + L+
Sbjct: 102 SAVIDRTAKMPLIMASAEGGVDIEELAARSPEKIVRYHINPLDEFLPYEAREIARKMGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   LY+ F   D  L EINPL+I  +  +   D+K+  DD+++YRH    
Sbjct: 162 SELIPSVGGVIWKLYQLFRKYDARLAEINPLVISGDSVI-AADAKLEVDDDSIYRH---- 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                  E     E +    +++ LDG+I  + NGAGL +  MD+IKL  G PA FLD+G
Sbjct: 217 ------REFMEMEEYEPEEFAFVKLDGDIAVIGNGAGLTLTAMDLIKL-NGEPATFLDIG 269

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D +  A  ++ S  SV+ + +N+ GGI R D + +G+++A+++ + ++PLV+RL 
Sbjct: 270 GGASEDVIRRALDLVISHPSVRVVFLNVLGGITRADDVARGVVNALRDARRDVPLVIRLT 329

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G R++ E+G+   T+  L+ AA+K V   K
Sbjct: 330 GTNEEEGQRILREAGIPFETS--LERAAEKAVEIAK 363


>gi|297190797|ref|ZP_06908195.1| succinyl-CoA synthetase subunit beta 2 [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722578|gb|EDY66486.1| succinyl-CoA synthetase subunit beta 2 [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 375

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 206/391 (52%), Gaps = 23/391 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  +Y +PV +     +   A  A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFGEYGIPVPEAETAQTAAQAREAAERLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVKLAADAAAAEVTARQILGMDI-------KGHTVRTVMLAQPVDIEEEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +     IAS +GGMDIEEVA   P+ + ++ + P  GVT++  A +     L 
Sbjct: 103 SYVLDRAADAFLAIASAEGGMDIEEVAATRPEAVARIPVPPAEGVTADKAAEIAAAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L++    +D  L+E+NPL+    G +  LD K++ DDNA +R     
Sbjct: 163 QET----APVLQALWQVLVREDALLVEVNPLVRTTAGDILALDGKVTLDDNARFRQARWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                  ED  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 NDDATLHEDPLEAVAAAKGLNYVKLDGTVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD  V  +L+N+FGGI  CD + +GI+ A+  V++  PLV+RL+
Sbjct: 279 GGASAAVMADGLSVILSDRDVNSVLVNVFGGITACDAVAEGIVQALDSVRLTKPLVVRLD 338

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQK 390
           G N   G  ++ E    ++  +  +D AA++
Sbjct: 339 GNNAARGRAILEERAHPLVQQSTTMDGAARR 369


>gi|126178791|ref|YP_001046756.1| succinyl-CoA synthetase, beta subunit [Methanoculleus marisnigri
           JR1]
 gi|125861585|gb|ABN56774.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanoculleus
           marisnigri JR1]
          Length = 361

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/383 (35%), Positives = 212/383 (55%), Gaps = 33/383 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK +  +Y +PV KGVVI +     + +  L G + V+K+Q+  GGRGK    
Sbjct: 1   MKLLEYEAKRVFAEYGIPVPKGVVIRAPEEVAAHLPDLGGGV-VLKAQVDVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV + +   +     RE+    +        G  V  +  E+   I  E Y+
Sbjct: 57  -------GGV-LMADRATAAETARELFSREI-------KGVPVGEILAEERLAIEHEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     + +  GG++IE++A++    + ++++ PL+     D+     M EL 
Sbjct: 102 SIAVDRSSRQPVVLFADAGGVEIEKMAQEDESAVRRVVVSPLL----RDIPPFL-MRELL 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +   +   LY  F  KD  L EINPL+    G +   D+K+  DDNAL R   I 
Sbjct: 157 GGAPKELAPVINCLYHVFQGKDAMLAEINPLVTTPRG-VYAADAKLIVDDNALARQ-GIA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+SE   RE EA++H  SY+ LDG+IG + NGAGL M+T+D+I+ Y G  ANFLDVG
Sbjct: 215 VNRDLSE---REREAEKHGFSYVELDGSIGVIGNGAGLTMSTLDLIEFYNGRAANFLDVG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQ++V  A +++ S   V  I++N+ GGI RCD + KGI++A     +   +++R+ 
Sbjct: 272 GGADQERVMHAVRLVASMPGVNVIVVNLLGGITRCDEVAKGIIAA----GVTPTVIVRMA 327

Query: 361 GANVDIGNRLIAESGLNVITAID 383
           G N + G RL+A  G  ++ ++D
Sbjct: 328 GTNEEEGRRLLAGCGYRMLESMD 350


>gi|150399183|ref|YP_001322950.1| succinyl-CoA synthetase subunit beta [Methanococcus vannielii SB]
 gi|150011886|gb|ABR54338.1| succinyl-CoA synthetase, beta subunit [Methanococcus vannielii SB]
          Length = 362

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 211/395 (53%), Gaps = 35/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK +  +  +P+ KG+V       ++ ++ + GP+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKRIFNENGIPIPKGIV------TKTKLEDIEGPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L    S I  ++G  +        G  V  + +E+   IL+E Y+
Sbjct: 51  -------GGILFADTLNEANSKIESLIGKEV-------KGEHVESLLIEEKIKILKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       I ST+GG+DIEE+A+  P+KI K  ++        +  ++     L 
Sbjct: 97  GVVVDRNEKNNVVIFSTEGGVDIEEIARTSPEKIIKYPVEAGSEFLPYNARNMLKKAGLS 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   +Y AF   D  L E+NPL+I   G++   D+ ++ DD+A ++H    
Sbjct: 157 SEEIPKVADIICKVYSAFKKMDGVLAEVNPLVITSEGKILAADAVLNVDDDAYFKH-SYM 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  +  +++  E        +Y+ LDG+I  + NGAGL +A+MD++K +GG PA FLD+G
Sbjct: 216 EFEEFKKQEKSE-------FAYVELDGDIAVIGNGAGLTLASMDVVKEFGGNPACFLDIG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V +A    T+ +SVKG  INI GGI RCD + KGI+  +KE K  +   +R+ 
Sbjct: 269 GGATREIVKSALLKATARNSVKGAFINILGGITRCDEVSKGIVDVLKE-KPELKFAVRMM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N   G  ++ ++  NV     ++DAA+ +   +
Sbjct: 328 GTNEKEGREILTKN--NVSYENSMEDAAKALTKII 360


>gi|256810426|ref|YP_003127795.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus fervens
           AG86]
 gi|256793626|gb|ACV24295.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus fervens
           AG86]
          Length = 365

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 214/408 (52%), Gaps = 61/408 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAGGRGKGRF 59
           M +HEY+AK + ++Y +PV +  +IS     E  +  +      V+K+Q+  GGRGK   
Sbjct: 1   MKLHEYEAKNIFKEYGIPVPESFLISK----EDDLSNIDIDKEVVLKAQVLVGGRGKA-- 54

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+   S+ +  I    E+    +        G +V  + VE+   I +E Y
Sbjct: 55  --------GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYY 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID------PLIG--------V 165
           +S++VDR +     I ST+GG+DIEE+A+  P+KI K  +D      P +         V
Sbjct: 100 VSIIVDRDAKKPLIIFSTKGGVDIEEIAEKEPEKIVKYHVDVKKPFLPYVARWIVKEAKV 159

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            SE++  + D++                LYK F D D +++EINPL+I K+  +   D+ 
Sbjct: 160 PSEEIGKVADIIY--------------KLYKIFKDWDATMVEINPLVITKDKNVYAADAV 205

Query: 226 ISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDI 285
           I  DD+A +RH          EE       ++   +Y+ LDG+I  + NGAGL +A+MD+
Sbjct: 206 IHLDDDAAFRHR--------YEEFEEFKNKEKLPFAYVELDGDIAVIGNGAGLTLASMDV 257

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
           I   G  PA FLD+GGGAD + V  A + +  + +VKGI INI GGI RCD + KGI+  
Sbjct: 258 INNLGRKPACFLDIGGGADAETVKLALRKVLENKNVKGIFINILGGITRCDEVAKGIVEV 317

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +KE   NI   +R+ G N DIG +++ E G+   T+  +++A +K++ 
Sbjct: 318 LKE-HPNIKFAVRMMGTNEDIGRKVLEEHGIPYETS--MEEAGKKLIE 362


>gi|307332148|ref|ZP_07611234.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
 gi|306882213|gb|EFN13313.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
          Length = 374

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 200/373 (53%), Gaps = 23/373 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ LL++  V V +  V+ +  AA +A + L G + V+K+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELLQENGVLVPRAEVVDTAEAARAAAERLGGRV-VIKAQVKTGGRGK---- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     +     R ILG  +        G  V+ V V +  ++ RE+YL
Sbjct: 56  ------AGGVKLADDPAAAERTARRILGMDI-------KGHTVHRVMVAEPVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
              +DR +G    IAS +GGM+IEEVA   P+ + ++ IDP  GVT    A +     L 
Sbjct: 103 GFTLDRAAGRFLAIASAEGGMEIEEVAAHRPEAVARIPIDPAEGVTEAKAAEIAAAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L+      D  L+EINPL++ ++G +  LD K++ DDNA +R     
Sbjct: 163 PET----AGTIRRLWTVLTAYDALLVEINPLVVTRDGAIVALDGKVTLDDNASFRQPSWD 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D +  D  E  A    L Y+ LDG +G + NGAGL M+T+D++   G  PA+FLD+G
Sbjct: 219 DSGDRAR-DPLEARAAAAGLGYVKLDGQVGVIGNGAGLVMSTLDVVAGCGARPADFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    ++  D  V+ +L+N+FGGI  CD +  GI+ A+  V +  PLV+RL+
Sbjct: 278 GGASAQVMADGLSLVLDDPEVRSVLVNVFGGITACDAVADGIVRALDTVPLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAE 373
           G N   G  ++ +
Sbjct: 338 GNNAARGRAILGQ 350


>gi|320532402|ref|ZP_08033240.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135379|gb|EFW27489.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 330

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 187/319 (58%), Gaps = 14/319 (4%)

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           R+ILG  +        G  V  V + DG D+  E Y S+L+DR       + S +GGMDI
Sbjct: 6   RDILGMDI-------KGHTVRAVLISDGVDLDAEYYFSILLDRAERQYLAMCSREGGMDI 58

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG-GDLFPNLYKAFCDKD 202
           E +A + P+ + ++ IDPL G+T      + +    +     D    +   L++ F  +D
Sbjct: 59  ETLAAERPEALARVGIDPLEGITPAVAHRIVEAAGFEAGPLADEVAAVIERLWEVFTAED 118

Query: 203 MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSY 262
            +L+E+NPL+   +GR+  LD K++ DDN+ +RH    EL D +  D  E  A++  L+Y
Sbjct: 119 ATLVEVNPLVKAADGRIIALDGKVTLDDNSRFRHPAHAELVDNAATDPLEARAREAGLNY 178

Query: 263 IALDGNIGCMVNGAGLAMATMDII----KLYGG-APANFLDVGGGADQDKVAAAFKIITS 317
           + L+G +G + NGAGL M+T+D++    + +GG  PANFLD+GGG+  + +A   +++ S
Sbjct: 179 VRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGMKPANFLDLGGGSSAEVMATGLEVVAS 238

Query: 318 DSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLIAESGL 376
           D  V+ IL+N+FGGI  CD + +GI++AV+ +  +  P+V+RL+G N + G  ++A++ +
Sbjct: 239 DPQVRAILVNVFGGITSCDTVAQGIVAAVESLGGLPKPVVVRLDGNNAETGRAILADAAI 298

Query: 377 NVITAIDLDDAAQKIVHAV 395
             +T +D  D A  +V A+
Sbjct: 299 EGVTVVDTMDGAADVVTAI 317


>gi|183601650|ref|ZP_02963020.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683816|ref|YP_002470199.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190852|ref|YP_002968246.1| Succinyl-CoA synthetase subunit beta [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196258|ref|YP_002969813.1| Succinyl-CoA synthetase subunit beta [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183219256|gb|EDT89897.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621466|gb|ACL29623.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249244|gb|ACS46184.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240250812|gb|ACS47751.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|289178591|gb|ADC85837.1| Succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis BB-12]
 gi|295793841|gb|ADG33376.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium animalis
           subsp. lactis V9]
          Length = 397

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 200/386 (51%), Gaps = 30/386 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++ V K V   + H    A   +  P+ V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIDVPKAVFAQNSHEVAEAADIIGYPV-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+       I    +IL  T+        G +V+ + V +  +IL E Y+
Sbjct: 57  -------GGVRIAHDRDEAILISEDILPMTI-------HGHKVSGILVTEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EEVA+ +P+ + +L I  L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEVARKHPESVKRLHISALEDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                    +  N+++ F   D +L+EINPL  +       +  L  LD+KIS DDNA +
Sbjct: 163 HADSAQAAQILLNMWRCFKQNDATLVEINPLAKVGDPDDESSKSLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-- 292
           RH   +   D    D  E  A++HNL Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFADPIVPDPFEQRAREHNLHYVHLTGEVGVIGNGAGLVMSSLDAVAFAGEEQG 282

Query: 293 ----PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
                ANFLD+GGGA    +  + +II SD  V+ + IN++GGI  C+ +  GIL A  +
Sbjct: 283 TGVKAANFLDIGGGASSQVMCESLEIILSDPQVESVFINVYGGITSCEQVALGILEAADQ 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAES 374
           +  + P+V+R EG   D G R++AE+
Sbjct: 343 LGASKPMVVRFEGNKADEGLRILAEA 368


>gi|331699080|ref|YP_004335319.1| succinyl-CoA ligase (ADP-forming) subunit beta [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953769|gb|AEA27466.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Pseudonocardia
           dioxanivorans CB1190]
          Length = 390

 Score =  206 bits (525), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 210/394 (53%), Gaps = 26/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G  + +   A +A   L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKELFAAHGVPVLPGRTVETADDAAAAAAEL-GTAVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G  V+ V V   +DI  E Y 
Sbjct: 57  -------GGVKLAENADEAKEKAGAILGMDI-------KGHTVHRVLVTTASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     + S +GGM+IE++A + P  + ++ +D + GV       +    ++ 
Sbjct: 103 SFLLDRSNRTFLAMCSAEGGMEIEQLAVERPDALARIPVDAIAGVDKAKADEIVAAGKIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +RH D  
Sbjct: 163 AAVAEEAAQVIVKLWETFVSEDATLVEVNPLVRDPQDKVIALDGKVTLDENADFRHPDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDII----KLYGGA-PA 294
            L D   E++ E +AK   L+Y+ L DG +G + NGAGL M+T+D++    + +GG  PA
Sbjct: 223 GLVDERTENALEAKAKAKGLNYVKLDDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMADGLDVILGDPDVKSVFVNVFGGITACDAVATGIVEALKILGDAAT 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            PLV+RL+G NV  G R++ E+   ++T +D  D
Sbjct: 343 KPLVVRLDGNNVIEGRRILDEANHPLVTQVDTMD 376


>gi|322699844|gb|EFY91603.1| succinyl-CoA synthetase beta chain [Metarhizium acridum CQMa 102]
          Length = 313

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 176/308 (57%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +L   L+TK  G  G  V  +YV + A      YL++ +DR +   A I S +GG++++ 
Sbjct: 1   MLNQRLLTKDNGTDGHLVEKLYVAEAATCDSHWYLAMTIDRENYQPAIIVSKEGGVELDV 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +  + P  +F        G+ +  V  +   L    Q       +   +Y  F D++ + 
Sbjct: 61  LISEQPDSLFTFGFGMSEGINNALVQDIQQRLGTTDQEMAKLTHILTQMYSIFRDREATH 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LEINPL    +G    L++  +FD  A  R  ++  LRD ++E   E+EA++H L Y+ +
Sbjct: 121 LEINPLGRSLDGSFTSLNAIFTFDKAAEQRQEEVSALRDKTQEVPDEVEAEKHGLVYVRM 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DG+IG +VNGAGLAMAT D I  +GGA ANFLD GG A ++ +  AF+IIT D  VK IL
Sbjct: 181 DGDIGNVVNGAGLAMATNDAIGFHGGASANFLDAGGKATKETMIQAFRIITRDERVKAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NI+GGI +CD++ + I+ A  E+ I +P+V+RL+G N + G +++ ++ L ++   D  
Sbjct: 241 VNIYGGITQCDMIAESIIGATSELDIRVPMVVRLQGTNSEKGLKMLEDANLGLVVESDFG 300

Query: 386 DAAQKIVH 393
            AA++ V 
Sbjct: 301 QAAKRAVE 308


>gi|89892991|ref|YP_516478.1| hypothetical protein DSY0245 [Desulfitobacterium hafniense Y51]
 gi|89332439|dbj|BAE82034.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 372

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 208/397 (52%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L  +  +P+ +  +I  +    SA++ L  P  V+K+Q+  GGRGK    
Sbjct: 1   MKLFEYQAKELFAESGIPIPQNALIGDISELNSALEKLGLPC-VLKAQVLQGGRGKAGLV 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +        VR +   +     I E  G  L+               VE+     RE+Y+
Sbjct: 60  KF-------VRTKEEAQKEAERILEATGKKLL---------------VEEAVPYEREMYV 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  SG+   +A  +GG+DIE++A+  P+KI K  +D  +G+ +    ++   L L+
Sbjct: 98  SITVDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGLMAYQADNIMYGLGLE 157

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +G  +   LY+ F   +  L+EINPL+I+++G +   D K + DDNALY+     
Sbjct: 158 QSAAKEGSKILLKLYQLFVKYNAELVEINPLMILRDGTMAAADGKFNLDDNALYKQNRFS 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA    + YIA +G+IG MV GAGLA   +D+I  YGG  AN+L+  
Sbjct: 218 LTRDHYKSDF-EYEAALDGIPYIAFEGDIGMMVAGAGLANVVLDLIHYYGGTVANYLEF- 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG +  K     K++   +  K ILI  FG I R DV+ +GI+ AVKE+K  IP+V  + 
Sbjct: 276 GGPNYHKAQQCMKMMLK-AKPKCILIATFGTIARADVMAQGIVEAVKELKPEIPIVAVIR 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+  +GL  ++  D ++A +K V  V G
Sbjct: 335 GTGEEDAQKLLRSAGLPSLS--DTEEAVRKAVEIVGG 369


>gi|119717812|ref|YP_924777.1| succinyl-CoA synthetase subunit beta [Nocardioides sp. JS614]
 gi|189081760|sp|A1SMQ5|SUCC_NOCSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119538473|gb|ABL83090.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nocardioides
           sp. JS614]
          Length = 386

 Score =  206 bits (523), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 135/398 (33%), Positives = 207/398 (52%), Gaps = 27/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K++VPV  G+V  +   A++A + L   +   + +            
Sbjct: 1   MDLMEYQAKELFAKHDVPVTLGIVAHTPDEAQAAAEQLGVVVVKAQVKAGG--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +    ILG  +        G RVN V +   A I  E Y 
Sbjct: 52  ---RGKAGGVKLAKTPEEARTHAEAILGMEI-------KGLRVNRVLIAPAASIEEEYYF 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS +GG++IEEVAK  P  + ++ IDP  GV       +    +  
Sbjct: 102 SFLLDRANRRYLCIASVEGGVEIEEVAKTNPDAVRQIPIDPGAGVDEAKAREIVADAKFP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        L+K F ++D +L+E+NPL  +   +L  LD K+S D+NA +RH +  
Sbjct: 162 EALTEQAVQTVLALWKVFVEEDATLVEVNPLARLAGDKLEALDGKVSLDENAEFRHEEHA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA-PAN 295
                 EED  E  AK   L+Y+ LDG++G + NGAGL M+T+D++    + +GG  PAN
Sbjct: 222 SFVIREEEDPLESAAKDKGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 281

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA+   +A    +I  D  VK + +N+FGGI  CD +  GI+ A+  +      
Sbjct: 282 FLDIGGGANAQVMADGLHVILGDEQVKAVFVNVFGGITACDEVANGIVGALDILGEDATK 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQK 390
           PLV+RL+G N D G R++ E+   ++T +D +D AA K
Sbjct: 342 PLVIRLDGNNADEGRRILTEAAHPLVTMVDTMDGAADK 379


>gi|332676154|gb|AEE72970.1| succinyl-CoA ligase [ADP-forming] subunit beta [Propionibacterium
           acnes 266]
          Length = 375

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/386 (35%), Positives = 211/386 (54%), Gaps = 32/386 (8%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +PV +G+V  +   A  A   L  P+  VK+Q+  GGRGK           GGV++  S 
Sbjct: 1   MPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA----------GGVKIAKSP 50

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
                    ILG  +        G  V+ V V +GADI  E Y S+L+DR       + S
Sbjct: 51  AEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCS 103

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP---N 193
            +GGMDIE +AK+ P+ + K+ +DP+ GV   D A   ++L   G    +   + P    
Sbjct: 104 REGGMDIETLAKERPEALAKVPVDPIDGV---DDAKAREILSEAGFPDSEQDAIVPAVLK 160

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D   L D +  D  E+
Sbjct: 161 LWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHAGLVDRATTDPLEL 220

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------GAPANFLDVGGGADQDK 307
            A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APANFLD+GGGA  + 
Sbjct: 221 RAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPANFLDIGGGASAEI 280

Query: 308 VAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIPLVMRLEGANVD 365
           +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++  K   PLV+RL+G  V 
Sbjct: 281 MANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAVKPLVVRLDGNAVA 340

Query: 366 IGNRLIAESGLNVITAID-LDDAAQK 390
            G +++ E    ++T +  +D+AA K
Sbjct: 341 EGRKILEEFNHPLVTMVSTMDEAASK 366


>gi|311064391|ref|YP_003971116.1| succinyl-CoA synthetase subunit beta [Bifidobacterium bifidum
           PRL2010]
 gi|310866710|gb|ADP36079.1| SucC Succinyl-CoA synthetase beta chain [Bifidobacterium bifidum
           PRL2010]
          Length = 401

 Score =  205 bits (522), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 199/384 (51%), Gaps = 30/384 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P  + V   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQHIPTPRAVFAQNSHEVAEAADAIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I     IL  T+        G +VN V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILLSESILPMTI-------HGHKVNGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L I+ L     E    +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPESVKRLHINALGDFDMEAAKRMAGQIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                   ++   +++ F D D +L+EINPL  +       +  L  LD+KIS D NA +
Sbjct: 163 HADLDQAANILLRMWQCFKDNDATLVEINPLAKIGDPDDEASKSLCALDAKISLDGNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D  + D  E  A +H L Y+ LDG +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWTRFDDPMQADPFEAAAAEHGLHYVHLDGQVGVIGNGAGLVMSSLDAVWDAGKKQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    ++ +  I+ SD  V+ + IN++GGI  C+ + KGIL A +E
Sbjct: 283 TNVTPANFLDIGGGASAAVMSDSLSIVLSDPQVESVFINVYGGITSCEQVAKGILQAFEE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIA 372
           +  + PLV+R +G     G +++A
Sbjct: 343 LHTSKPLVVRFDGNAAAEGLQILA 366


>gi|224283108|ref|ZP_03646430.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287476|ref|YP_003938734.1| Succinyl-CoA synthetase beta chain [Bifidobacterium bifidum S17]
 gi|313140257|ref|ZP_07802450.1| succinyl-CoA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|309251412|gb|ADO53160.1| Succinyl-CoA synthetase beta chain [Bifidobacterium bifidum S17]
 gi|313132767|gb|EFR50384.1| succinyl-CoA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 401

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 199/384 (51%), Gaps = 30/384 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P  + V   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQHIPTPRAVFAQNSHEVAEAADAIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I     IL  T+        G +VN V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILLSESILPMTI-------HGHKVNGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L I+ L     E    +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPESVKRLHINALGDFDMEAAKRMAGQIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                   ++   +++ F D D +L+EINPL  +       +  L  LD+KIS D NA +
Sbjct: 163 HADLDQAANILLRMWQCFKDNDATLVEINPLAKIGDPDDEASKSLCALDAKISLDGNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D  + D  E  A +H L Y+ LDG +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWARFDDPMQADPFEAAAAEHGLHYVHLDGQVGVIGNGAGLVMSSLDAVWDAGKEQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    ++ +  I+ SD  V+ + IN++GGI  C+ + KGIL A +E
Sbjct: 283 TNVTPANFLDIGGGASAAVMSDSLSIVLSDPQVESVFINVYGGITSCEQVAKGILQAFEE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIA 372
           +  + PLV+R +G     G +++A
Sbjct: 343 LHTSKPLVVRFDGNAAAEGLQILA 366


>gi|258404678|ref|YP_003197420.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense
           DSM 5692]
 gi|257796905|gb|ACV67842.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense
           DSM 5692]
          Length = 696

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 203/388 (52%), Gaps = 23/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M  +E+Q+K+L +   +PV +G +++   AA    +    P +++K+Q+  GGRGK    
Sbjct: 1   MKCNEHQSKSLFKSCGIPVPQGDLVTPEMAA--VYRPDFAPPFMLKAQVLRGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++L+ +   ++EI    +  +        V  V VE  A I RE YL
Sbjct: 56  -------GGIRKVTALQDLPGTLKEIFDMRIGDEA-------VPLVRVEPAAGIAREFYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ + R           +GG+DIE    D    +    +DP +G+ +  V S    L + 
Sbjct: 102 SISIQRALAAPVLTVGREGGVDIEASGAD---NLLIQPLDPCLGLRAHHVRSAFFHLGVD 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   L   LY+A   + ++L EINPLI+  +     LD K+  DDNA+    ++ 
Sbjct: 159 NDHWKDFEALVHRLYEAVSHRGVTLAEINPLILTDHDHWLALDGKVELDDNAVELQPELA 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L        +E  A+   LSY  L+G +G MVNGAGLAMATMD++   G   ANFLDVG
Sbjct: 219 SLYQPEHATDQENTARNAGLSYHTLNGRVGLMVNGAGLAMATMDMLNFAGLPAANFLDVG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V AA  ++  D  V+ +LINIFGGI+ C  +   +++A++  ++  PLV+R +
Sbjct: 279 GGADEERVGAALDLLFGDQRVQTVLINIFGGILSCSKVASALIAALEHREVVKPLVVRFD 338

Query: 361 GANVDIGNRLIAESGLNVITAID-LDDA 387
           G   + G + +  +G   +T ++ L DA
Sbjct: 339 GHGAEEGRQRLRHAGHATVTVVETLQDA 366


>gi|219666260|ref|YP_002456695.1| succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
 gi|219536520|gb|ACL18259.1| Succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
          Length = 372

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/397 (33%), Positives = 208/397 (52%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L  +  +P+ +  +I  +    SA++ +  P  V+K+Q+  GGRGK    
Sbjct: 1   MKLFEYQAKELFAESGIPIPQNALIGDISELNSALEKIGLPC-VLKAQVLQGGRGKAGLV 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +        VR +   +     I E  G  L+               VE+     RE+Y+
Sbjct: 60  KF-------VRTKEEAQKEAERILEATGKKLL---------------VEEAVPYEREMYV 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  SG+   +A  +GG+DIE++A+  P+KI K  +D  +G+ +    ++   L L+
Sbjct: 98  SITVDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGLMAYQADNIMYGLGLE 157

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +G  +   LY+ F   +  L+EINPL+I+++G +   D K + DDNALY+     
Sbjct: 158 QSAAKEGSKILLKLYQLFVKYNAELVEINPLMILRDGTMAAADGKFNLDDNALYKQNRFS 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA    + YIA +G+IG MV GAGLA   +D+I  YGG  AN+L+  
Sbjct: 218 LTRDHYKSDF-EYEAALDGIPYIAFEGDIGMMVAGAGLANVVLDLIHYYGGTVANYLEF- 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG +  K     K++   +  K ILI  FG I R DV+ +GI+ AVKE+K  IP+V  + 
Sbjct: 276 GGPNYHKAQQCMKMMLK-AKPKCILIATFGTIARADVMAQGIVEAVKELKPEIPIVAVIR 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+  +GL  ++  D ++A +K V  V G
Sbjct: 335 GTGEEDAQKLLRSAGLPSLS--DTEEAVRKAVEIVGG 369


>gi|88601414|ref|YP_501592.1| succinyl-CoA synthetase subunit beta [Methanospirillum hungatei
           JF-1]
 gi|88186876|gb|ABD39873.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Methanospirillum hungatei JF-1]
          Length = 359

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 204/377 (54%), Gaps = 39/377 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M + EY+AK +L+K  +P+ +GV++   S +     IK        +K+Q+   GRGK  
Sbjct: 1   MKLKEYEAKDILQKAGIPIPRGVLVKKGSDYLVSPDIKE-----AAIKAQVEVAGRGKA- 54

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GG+        +++D   I  +T    QT   G  V  + +E+   I  E 
Sbjct: 55  ---------GGI--------LMADHAGIRDTTEKLFQTTIKGLPVEEILIEEKLQIQHEY 97

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+ +DR+      + +T+GG+DIEEVA+  P  I K  + PL+      V        
Sbjct: 98  YLSITIDRSQKAPVILFTTEGGVDIEEVAQKNPAAIRKATVYPLL----SKVPGYTLRYL 153

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L G  + + G +   LY  F  +D  L EINPL++  +G L   D+K+  DDNAL RH  
Sbjct: 154 LNGAPK-EIGAIIQKLYTVFMSQDALLAEINPLVMTPDG-LFAADAKLILDDNALARH-G 210

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQE RD+SE   RE +A  H  S++ L+GNIG + NGAGL MAT+D+I   GG PANFLD
Sbjct: 211 IQENRDLSE---RERKAAAHGFSFVELNGNIGVIGNGAGLTMATVDLINRMGGRPANFLD 267

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGAD+ +VA A +++ S   V  I++N+ GGI RCD +  GI+    E  ++  +++R
Sbjct: 268 VGGGADRVRVAHAVRLLGSMPDVTVIIVNLLGGITRCDEVAAGII----EAGVSQQIIVR 323

Query: 359 LEGANVDIGNRLIAESG 375
           L G N   G  L++  G
Sbjct: 324 LAGTNEAEGKALLSSKG 340


>gi|225175980|ref|ZP_03729972.1| succinyl-CoA synthetase, beta subunit [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168568|gb|EEG77370.1| succinyl-CoA synthetase, beta subunit [Dethiobacter alkaliphilus
           AHT 1]
          Length = 369

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 213/402 (52%), Gaps = 39/402 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR-- 58
           M ++EY  K    KY +PV +G V S+   A +  + +     VVKSQ+ +G RGK    
Sbjct: 1   MKLYEYMGKEQFAKYGIPVPEGGVASTPEEAAALTEKIGS--VVVKSQVLSGKRGKAGGI 58

Query: 59  -FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F + PA+++     E S K        +LGS L        G  V+ V VE    I +E
Sbjct: 59  GFTDDPAEAR-----EFSAK--------LLGSEL-------CGFTVDKVLVEQKLQIDKE 98

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            YL++ VD  +     +AS QGGMDIEEV +++   + +  +D  IG+       +   L
Sbjct: 99  FYLAITVDGAARKPIILASAQGGMDIEEVPEEH---MVRQTLDVTIGMQPYMTRDITRRL 155

Query: 178 ELQG--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            + G    +I G  +   LYK + + D  L EINPL+I     +   D+K++ DD++L+R
Sbjct: 156 GVTGGIAKQIQG--ILLKLYKLYVELDAELAEINPLVISGENVIAA-DAKVTIDDDSLFR 212

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D   L  V E    E +A    LSY+ L+GNI  M NGAG+ MAT+D+I+ YGG+ AN
Sbjct: 213 HKD---LPVVEERTDAEKKAHALGLSYVELEGNIAVMANGAGITMATLDLIQYYGGSAAN 269

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GGGA  ++ + A +++ S +  K ILINIFGGI RCD +        K + I +P+
Sbjct: 270 FLDAGGGAGIEQTSKALELLLSKNP-KAILINIFGGITRCDDVANAFAYVKKNIGIPVPV 328

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           V+RL G N D G  ++ E G+       + +AA K V   KG
Sbjct: 329 VIRLVGTNEDEGRAILKEVGIEAYQF--MHEAASKAVEIAKG 368


>gi|297156122|gb|ADI05834.1| succinyl-CoA synthetase subunit beta [Streptomyces bingchenggensis
           BCW-1]
          Length = 375

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 207/390 (53%), Gaps = 33/390 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QA+ L  +Y V V +  V  S  AA +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQARELFERYGVLVPRAEVAGSAPAARAAAERLGGRV-VVKAQVKTGGRGK---- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V+ V V +  ++ RE Y+
Sbjct: 56  ------AGGVKLAADPAAAELTARQILGMDI-------KGHTVHQVMVAEPVEVEREFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
              +DR  G    IAS +GGM+IEEVA   P+ + ++ +DP  GVT    A +     L 
Sbjct: 103 GYTLDRARGRFLAIASAEGGMEIEEVAARRPEAVARIAVDPEEGVTEAKAAEIAAAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A          L+    ++D  L+E+NPL++ + G +  LD K++ DDNA +R     
Sbjct: 163 AEA----AATLHRLWTVLTEQDALLVEVNPLVVTRGGAIVALDGKVTLDDNADFR----- 213

Query: 241 ELRDVSEEDSREIEAKQ----HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             R  + ED+     +       L+Y+ LDG +G + NGAGL M+T+D++   G  PA+F
Sbjct: 214 --RTYAYEDTGGAGLEAEAAAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPADF 271

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GGGA  + +A    ++  D  V+ +L+N+FGGI  CD + +GI+ A+  V +  PLV
Sbjct: 272 LDIGGGASAEVMADGLSVVLGDPHVRSVLVNVFGGITACDAVAEGIVRALDTVTLTKPLV 331

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +RL+G +   G  ++ E    ++  +D  D
Sbjct: 332 VRLDGNSAARGRAILTERAHPLVHQVDTMD 361


>gi|86211695|gb|ABC87499.1| succinyl-CoA synthetase beta chain [Streptomyces sp. NRRL 30748]
          Length = 372

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 205/375 (54%), Gaps = 28/375 (7%)

Query: 22  GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           G VI +  AA    + L G   VVK+Q+  GGRGK           GGV++ S     + 
Sbjct: 4   GEVIDTPGAAREVAERLGG-RAVVKAQVKTGGRGKA----------GGVKLASDPDDAVE 52

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGM 141
              +ILG  +        G  V+ V + + ADI  E Y+S L+DRT+     +AS +GG+
Sbjct: 53  KAGQILGMDI-------KGHTVHKVMLAETADIKEEYYVSFLLDRTNRTFLAMASVEGGV 105

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           +IE VA+  P+ + K+ +D + GVT E  A +    +   +       +   L+  F  +
Sbjct: 106 EIEVVAEQNPEALAKIPVDAIEGVTEEKAAEIVAAAKFPAEIADQVVAVLQKLWTVFIKE 165

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D  L+E+NPL+  ++G++  LD K+S D+NA +R  + + L D +  +  E  AK   L+
Sbjct: 166 DALLVEVNPLVKTEDGKVIALDGKVSLDENAAFRQPEHEALEDKAAANPLEAAAKAKGLN 225

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANFLDVGGGADQDKVAAAFKIIT 316
           Y+ LDG +G + NGAGL M+T+D++   G       PANFLD+GGGA  + +A   +II 
Sbjct: 226 YVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPANFLDIGGGASAEVMANGLEIIL 285

Query: 317 SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLI 371
            D  VK + +N+FGGI  CD +  GI+ A++ +K     ++ PLV+RL+G N ++G +++
Sbjct: 286 GDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGEDVSKPLVVRLDGNNAELGRKIL 345

Query: 372 AESGLNVITAIDLDD 386
            ++   ++  +D  D
Sbjct: 346 TDANHPLVQQVDTMD 360


>gi|296109065|ref|YP_003616014.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus infernus
           ME]
 gi|295433879|gb|ADG13050.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus infernus
           ME]
          Length = 362

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 214/399 (53%), Gaps = 43/399 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY + V K  +I      E  +K       V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKKIFKKYGIDVPKSFLIKKGDDVE--LKEFDEA--VLKAQVLVGGRGKA--- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   ++ ++    + E+    +        G +V+ + VE+   I +E YL
Sbjct: 54  -------GGILF-TNKENFKEKVEELFNKEI-------KGEKVDKILVEEKLRIKKEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID---PLIGVTSEDVASLCDML 177
           S+ +DR       I S++GG+DIEE+A+ +P+KI K  +D   P +     ++A      
Sbjct: 99  SITIDRNEKKPVIIFSSEGGVDIEEIAEKHPEKIIKYYVDIKKPFLPYIGREIAK----- 153

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +    I  GD+   +YK F + D +L+EINPL+I ++ ++   D+ I  DD++ +R  
Sbjct: 154 --KAGVEIKVGDIIYKVYKIFKELDATLVEINPLVITEDNKIYAADAVIHLDDDSYFR-- 209

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
             Q+  +  E  ++E        +Y+ LDG++  + NGAGL +A+MD I  +G  PA FL
Sbjct: 210 --QDFSEFEEYKNKE----NLPFAYVELDGDVAVIGNGAGLTLASMDTIYDFGLKPACFL 263

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGAD++    A K +  +  VKGI IN+ GGI RCD + K I+  +K+   NI   +
Sbjct: 264 DIGGGADEETTKLALKKVLENKKVKGIFINVLGGITRCDEVAKAIVEILKD-NPNIKFSV 322

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G N ++G +++ E+  N+  +  + +A +++  +++
Sbjct: 323 RLTGTNEELGRKILEEA--NIPYSTSMYEAGKRLAESLR 359


>gi|254513128|ref|ZP_05125194.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
 gi|221533127|gb|EEE36122.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
          Length = 384

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 215/398 (54%), Gaps = 16/398 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E  +K LL +Y + + +G    +   AE+A K      YVVK+ I AGGRG     
Sbjct: 1   MFLSEQVSKELLSQYGLLIPEGRTAKTPELAEAACKEFNAKRYVVKALIPAGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++  SV      +LGSTL+T+QT   G RV+ VYVE   DI ++ ++
Sbjct: 58  -------GGVKFAATPSSVREIAENLLGSTLVTEQTNEGGERVDAVYVEAAIDIAKDYFI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D  +G    +AS+ GG++ E+ ++     +   L+ P    +   +      + ++
Sbjct: 111 AIALDPGTGSPLLLASSDGGVEFEQRSRMDEGTVRTHLLAPESDESRAALEGFLKEIGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G   ID   +F    +AFC+ DM+LLEINP      G   V+D+K+  D N ++RH + +
Sbjct: 171 GTTAID--SIFA-ARRAFCENDMTLLEINPFARTATGDWMVIDAKVLLDGNTIFRHPEFE 227

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +  D+S  +S E+EA+++N++ + L GN+G + NGAGL +AT D++   GG PANF+D+
Sbjct: 228 TMAADLSRPES-ELEAQKNNINLVKLTGNVGVVANGAGLGLATHDMLVDAGGDPANFMDI 286

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR-CDVLVKGILSAVKEVKINIPLVMR 358
              A    VA   +++  D +VK IL+N+ GG M   D + +GI  A    +  +P++  
Sbjct: 287 RTTAKSFDVAKGVELLLGDPNVKVILLNVHGGGMTAADTVAEGINFAYSRSERQLPVIAH 346

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + G N + G R++ +  + V T   + DA  ++V   +
Sbjct: 347 ISGQNAEWGIRILRDRKVPVETFDTISDAVSRVVEIAR 384


>gi|261350219|ref|ZP_05975636.1| succinyl-CoA synthetase, beta subunit [Methanobrevibacter smithii
           DSM 2374]
 gi|288861005|gb|EFC93303.1| succinyl-CoA synthetase, beta subunit [Methanobrevibacter smithii
           DSM 2374]
          Length = 371

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 207/393 (52%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK +  +  +P+ +G V +S   A S    +  P+  +KSQ+  GGRGK    
Sbjct: 1   MKFFEYMAKRIFNEEGIPILEGHVANSAEEATSIASDMGVPV-AIKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +          ++G+T+        G RV+ + +E  A+I++E +L
Sbjct: 57  -------GGIKFADNPGEAYKVADSLIGTTI-------NGERVHQLLIEKKANIIKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     + S +GG++IE +AK  P+KI K   +PLI     +   +   + + 
Sbjct: 103 SISIDRANKRPVIMVSNEGGIEIENLAKTNPEKIIKYHPNPLIEFLPYESREIARKMGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     GD+   LYK F   D    EINPL++   G L   D+K   ++++LYRH D+ 
Sbjct: 163 SELISPMGDVIYKLYKLFEKYDAETAEINPLVLTDEG-LIAADAKFVVENDSLYRHPDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L             K+  + ++ LDG+I  + NGAGL +  MD+IK +GG PA FLD+G
Sbjct: 222 KLA----------RYKKKAVDFVKLDGDIAVIGNGAGLTLTGMDMIKFHGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  +  I+ +   VK + +N+ GGI + D +  G++ A+KE K  + +V+RL 
Sbjct: 272 GGASEESIKKSLNIVLNYEPVKVVFLNVLGGITKADDVAHGVVDAIKESKSLVSIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N + G R++ E+G+     I ++ AA+K V 
Sbjct: 332 GTNEEEGQRILEEAGIPY--EISMEKAAKKAVE 362


>gi|307354405|ref|YP_003895456.1| succinyl-CoA synthetase subunit beta [Methanoplanus petrolearius
           DSM 11571]
 gi|307157638|gb|ADN37018.1| succinyl-CoA synthetase, beta subunit [Methanoplanus petrolearius
           DSM 11571]
          Length = 369

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/391 (35%), Positives = 212/391 (54%), Gaps = 41/391 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHA------AESAIKTLP-GPLYVVKSQIHAGG 53
           M + EY+AK + +KY +PVAKG V+             S IK    G   V+K+Q+  GG
Sbjct: 1   MKLLEYEAKDIFKKYGIPVAKGFVVKKTDCDGTGGKINSGIKECELGDEVVIKAQVEVGG 60

Query: 54  RGK-GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           RGK G     PA    G   E +      DI+ +L               V+ + VE+  
Sbjct: 61  RGKAGGVVICPA----GDAPEKAAAMFAKDIKGVL---------------VDTILVEEKL 101

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            I  E Y+S+ +DR+      + S +GG++IEE AK+ P  + ++ + P++    +D+  
Sbjct: 102 PITGEYYVSITLDRSKKAPVILFSAEGGVEIEETAKNNPGALHRVRVSPML----DDIPD 157

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
              M EL   A  +   +  +LY+ FC  D  L EINPL+    G +   D+KI  DDNA
Sbjct: 158 FM-MRELVRDAPKELAPVIKSLYRVFCKSDAILAEINPLVTTGKG-VYAADAKIIVDDNA 215

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           L R   I   RD++E   RE  A+    SY+ L+GNIG + NGAGL M+T+D+I+ +GG 
Sbjct: 216 LGRQ-GITVNRDLTE---RERLAEDLGFSYVELEGNIGVIGNGAGLTMSTLDMIEYFGGK 271

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLDVGGGAD+ +V +A K+++    VK I++N+ GGI RCD +  GI+    E  ++
Sbjct: 272 AANFLDVGGGADRGRVCSAVKLVSGMDGVKVIVVNLLGGITRCDEVAAGIV----EAGVS 327

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAID 383
             +V+RL G N   G ++++E G  ++ +++
Sbjct: 328 QQVVVRLAGTNEAEGKKILSEKGYRMLGSME 358


>gi|222445221|ref|ZP_03607736.1| hypothetical protein METSMIALI_00849 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434786|gb|EEE41951.1| hypothetical protein METSMIALI_00849 [Methanobrevibacter smithii
           DSM 2375]
          Length = 371

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 207/393 (52%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK +  +  +P+ +G V +S   A S    +  P+  +KSQ+  GGRGK    
Sbjct: 1   MKFFEYMAKRIFNEEGIPILEGHVANSAEEATSIASDMGVPV-AIKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +          ++G+T+        G RV+ + +E  A+I++E +L
Sbjct: 57  -------GGIKFADNPGEAYKVADSLIGTTI-------NGERVHQLLIEKKANIIKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     + S +GG++IE +AK  P+KI K   +PLI     +   +   + + 
Sbjct: 103 SISIDRANKRPVIMVSNEGGVEIENLAKTNPEKIIKYHPNPLIEFLPYESREIARKMGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     GD+   LYK F   D    EINPL++   G L   D+K   ++++LYRH D+ 
Sbjct: 163 SELISPMGDVIYKLYKLFEKYDAETAEINPLVLTDEG-LIAADAKFVVENDSLYRHPDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L             K+  + ++ LDG+I  + NGAGL +  MD+IK +GG PA FLD+G
Sbjct: 222 KLA----------RYKKKAVDFVKLDGDIAVIGNGAGLTLTGMDMIKFHGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  +  I+ +   VK + +N+ GGI + D +  G++ A+KE K  + +V+RL 
Sbjct: 272 GGASEESIKKSLNIVLNYEPVKVVFLNVLGGITKADDVAHGVVDAIKESKSLVSIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N + G R++ E+G+     I ++ AA+K V 
Sbjct: 332 GTNEEEGQRILEEAGIPY--EISMEKAAKKAVE 362


>gi|159905944|ref|YP_001549606.1| succinyl-CoA synthetase subunit beta [Methanococcus maripaludis C6]
 gi|159887437|gb|ABX02374.1| succinyl-CoA synthetase, beta subunit [Methanococcus maripaludis
           C6]
          Length = 362

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/387 (34%), Positives = 213/387 (55%), Gaps = 41/387 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++  +P+ K  +          + ++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENGIPIPKNKLTCG------KVDSIDYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L      I  ++G T+        G  V  V +E+   I +E Y+
Sbjct: 51  -------GGILFADNLDDANEKIESLIGKTV-------KGELVEKVLLEEQIKIAKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC-DMLEL 179
            ++V R       I ST+GG+DIEEVA   P+KI KL ++P      E +  L  +ML+ 
Sbjct: 97  GVVVSRNEKNNVVIFSTEGGVDIEEVASKTPKKIIKLQLEP----GKEFLPYLAREMLKK 152

Query: 180 QG--QARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            G   A I    D+   +YKAF D D  L EINPL+  ++G++   D+ ++ DD+A +RH
Sbjct: 153 AGIPSAEIPKVADVLCKVYKAFKDMDGILAEINPLVFTEDGKIIAADAVLNIDDDAYFRH 212

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
                  D  EE +++   ++   +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA F
Sbjct: 213 K-----YDKFEEFNKQ---EKSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACF 264

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGG++++ V  A    TS  +VKG  INI GGI RCD +  GI+  +KE   N+   
Sbjct: 265 LDVGGGSNRETVKKALLKATSRKNVKGAFINILGGITRCDEVSLGIVDVLKE-NPNLKFA 323

Query: 357 MRLEGANVDIGNRLIAESGLNVITAID 383
           +R+ G N + G ++++E+G+N   +++
Sbjct: 324 VRMMGTNEEEGRKILSENGVNFENSME 350


>gi|154487341|ref|ZP_02028748.1| hypothetical protein BIFADO_01191 [Bifidobacterium adolescentis
           L2-32]
 gi|154083859|gb|EDN82904.1| hypothetical protein BIFADO_01191 [Bifidobacterium adolescentis
           L2-32]
          Length = 395

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 206/387 (53%), Gaps = 30/387 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAIFAQNSHEVAEAADQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKTRDESILASEDILPMTIHKH-------KVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALDDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  +       +  L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKSLCALDAKISLDDNASF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L G++G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFTDPIHVDPYEQKAREHGLHYVHLKGSVGVIGNGAGLVMSSLDAVSGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + ++ + +I+ SD  V+ +LIN++GGI  C+ + KGIL A+ E
Sbjct: 283 TNVKPANFLDIGGGASAEVMSNSLEIVLSDPQVESVLINVYGGITSCEQVAKGILEALDE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG 375
           +  + P+V+R +G     G  ++A++G
Sbjct: 343 LGSSKPIVVRFDGNAAAEGLNILAQAG 369


>gi|257077170|ref|ZP_05571531.1| succinyl-CoA synthetase subunit beta [Ferroplasma acidarmanus fer1]
          Length = 366

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 212/391 (54%), Gaps = 32/391 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + +KY +PV  G VI +V      ++    P+  +KSQI +G RGK    
Sbjct: 1   MNLYEYMGKEIFKKYGIPVPDGYVIENV----GELRKFEYPV-AIKSQILSGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +   +     ++L ST+           V  + +E   +I +E+YL
Sbjct: 53  -------GGIKFARNSNELSEFSDKLLNSTI-------NNLTVKKLLIERMLNIKKEIYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     I S  GGM+IE V +   + I K+ IDP++G +          + ++
Sbjct: 99  SITLDRATKEPVIILSADGGMEIESVPE---ENIHKIHIDPMVGYSDYIAREALSYIPVE 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +    +L  +LYKAF  +D  L EINPL+I     +   DSK+  DDNALYRH D  
Sbjct: 156 NKKQF--SNLLSSLYKAFVGEDALLTEINPLVIDAENNIIAGDSKVIIDDNALYRHKDYM 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D  ++ + E EA   + ++I +DG+IG + NGAGL MATMD + L+   P NFLD+G
Sbjct: 214 -ITD-PDKTALENEAASKSFTFIEMDGDIGVIANGAGLTMATMDSLTLHKLKPRNFLDLG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  + + V  AF  +   +  K I +NIFGG+ + D +  GI+S+ K+  I  P+V+RL 
Sbjct: 272 GTDNIEIVEDAFSFVMR-ARPKLIFVNIFGGVTKADTVANGIVSSKKKFDIKQPIVVRLS 330

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G + + G +++ ESG+   T  ++ DA +++
Sbjct: 331 GVHEEEGQKILLESGIKAFT--NMTDAVKEL 359


>gi|225352123|ref|ZP_03743146.1| hypothetical protein BIFPSEUDO_03738 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157370|gb|EEG70709.1| hypothetical protein BIFPSEUDO_03738 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 397

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 208/389 (53%), Gaps = 36/389 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K V   + H    A + +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAVFAQNSHEVAEAAEQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKNRDEAILASEDILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L      D+ +   M E  
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDAL---EDFDIEAATKMAESI 159

Query: 181 GQARID---GGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDN 231
           G    D      +   +++ F + D +L+EINPL  +       +  L  LD+KIS DDN
Sbjct: 160 GFYHADVNQAAQILLKMWQCFKENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDN 219

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH   +   D    D  E +A++H L Y+ L G++G + NGAGL M+++D +   G 
Sbjct: 220 AAFRHDGWKRFADPVHVDPFEQKAREHGLHYVHLQGSVGVIGNGAGLVMSSLDAVSGAGE 279

Query: 292 ------APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
                  PANFLD+GGGA  + +  + +I+ SD  V+ +LIN++GGI  C+ + KGIL A
Sbjct: 280 DQGTNVKPANFLDIGGGASAEVMCGSLEIVLSDPQVESVLINVYGGITSCEQVAKGILEA 339

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAES 374
           + ++  + PLV+R +G     G  ++A++
Sbjct: 340 LDKLGSSKPLVVRFDGNAAAEGLHILAQA 368


>gi|213692043|ref|YP_002322629.1| Succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213523504|gb|ACJ52251.1| Succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320458155|dbj|BAJ68776.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 400

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 205/389 (52%), Gaps = 36/389 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPSAIFAQNSHEVAEAADAIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAIVESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L      D+A+  +M    
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDAL---GDFDLAAATEMARSI 159

Query: 181 G--QARID-GGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDN 231
           G   A +D    +   +++ F D D +L+EINPL  +         +L  LD+KIS DDN
Sbjct: 160 GFYHADVDQAAQILLKMWRVFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDN 219

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH   +   D    D  E  A++H L Y+ L G +G + NGAGL M+++D +   G 
Sbjct: 220 AAFRHGGWERFVDSVVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGE 279

Query: 292 A------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
                  PANFLD+GGGA    +A + +I+ SD  V+ + INI+GGI  C  +  GIL A
Sbjct: 280 EQGSDVKPANFLDIGGGASAAVMAESLQIVLSDPQVESVFINIYGGITSCVEVANGILDA 339

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAES 374
           V ++  + P+V+R +G     G  ++A +
Sbjct: 340 VAKLGGSKPIVVRFDGNAAAEGLHILASA 368


>gi|148642984|ref|YP_001273497.1| succinyl-CoA synthetase, beta subunit, SucC [Methanobrevibacter
           smithii ATCC 35061]
 gi|148552001|gb|ABQ87129.1| succinyl-CoA synthetase, beta subunit, SucC [Methanobrevibacter
           smithii ATCC 35061]
          Length = 371

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 207/393 (52%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK +  +  +P+ +G V +S   A S    +  P+  +KSQ+  GGRGK    
Sbjct: 1   MKFFEYMAKRIFNEEGIPILEGHVANSAEEATSIASDMGVPV-AIKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +          ++G+T+        G RV+ + +E  A+I++E +L
Sbjct: 57  -------GGIKFADNSGEAYKVADSLIGNTI-------NGERVHQLLIEKKANIIKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     + S +GG++IE +AK  P+KI K   +PLI     +   +   + + 
Sbjct: 103 SISIDRANKKPVIMVSNEGGVEIENLAKTNPEKIIKYHPNPLIEFLPYESREIARKMGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     GD+   LYK F   D    EINPL++   G L   D+K   ++++LYRH D+ 
Sbjct: 163 SELISPMGDVIYKLYKLFEKYDAETAEINPLVLTDEG-LIAADAKFVVENDSLYRHPDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L             K+  + ++ LDG+I  + NGAGL +  MD+IK +GG PA FLD+G
Sbjct: 222 KLA----------RYKKKAVDFVKLDGDIAVIGNGAGLTLTGMDMIKFHGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  +  I+ +   VK + +N+ GGI + D +  G++ A+KE K  + +V+RL 
Sbjct: 272 GGASEESIKKSLNIVLNYEPVKVVFLNVLGGITKADDVAHGVVDAIKESKSLVSIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N + G R++ E+G+     I ++ AA+K V 
Sbjct: 332 GTNEEEGQRILEEAGIPY--EISMEKAAKKAVE 362


>gi|212715822|ref|ZP_03323950.1| hypothetical protein BIFCAT_00723 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661189|gb|EEB21764.1| hypothetical protein BIFCAT_00723 [Bifidobacterium catenulatum DSM
           16992]
          Length = 397

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 203/386 (52%), Gaps = 30/386 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K V   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAVFAQNSHEVAEAADQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I     IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKNRDEAILVSEGILPMTIHKH-------KVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALEDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  +       +  L  LD+KIS DDNA +
Sbjct: 163 HADVNQAAQILLKMWQCFKDNDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D    D  E +A++H L Y+ L G++G + NGAGL M+++D I   G    
Sbjct: 223 RHDGWNRFADPVHVDPFEQKAREHGLHYVHLQGSVGVIGNGAGLVMSSLDAISGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +  + +I+ SD  V+ +L+N++GGI  C+ + KGIL A+ +
Sbjct: 283 TNVKPANFLDIGGGASAEVMCGSLEIVLSDPQVESVLVNVYGGITSCEQVAKGILEALDK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAES 374
           +  + PLV+R +G     G R++A++
Sbjct: 343 LGSSKPLVVRFDGNAAAEGLRILAQA 368


>gi|329765514|ref|ZP_08257090.1| succinate--CoA ligase (ADP-forming) [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137952|gb|EGG42212.1| succinate--CoA ligase (ADP-forming) [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 368

 Score =  202 bits (514), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 213/397 (53%), Gaps = 31/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+QAK L R+Y + +      +++       K L  P +V+K Q+  GGRGK    
Sbjct: 1   MRLLEFQAKELFRQYGINLLPSKASTNIEEGRKHAKELGYP-FVIKIQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         ++LG T+        G +   + +E  ADI +ELYL
Sbjct: 57  -------GGIQKCQNDDEFDLKYPQVLGLTI-------KGEKARAILLEKMADIKKELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLEL 179
           S+ ++R+      IAS +GG++IE V         +++ +  +G  SE VA  +   ++L
Sbjct: 103 SMFLNRSKRCYTIIASPEGGVEIESVKN-------QIIREVGLGNVSEQVAREVAKEMKL 155

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+A  D  D+   L K   +K+  L EINPL IM++G L  LD K   DDN+ +RH ++
Sbjct: 156 EGKAADDFVDILQKLSKLTIEKEAELAEINPLAIMQDGSLMALDGKFVTDDNSNFRHDEL 215

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           Q+ ++ +E + R   A++   S + LDGNI  + NGAGL M+T+D++   GG PA FLDV
Sbjct: 216 QKYQEKTEIEER---AEKSGFSLVELDGNIAVVGNGAGLVMSTLDMLSDNGGKPACFLDV 272

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V  A  +I+  S VKGIL+N++GGI++  V+ +  L A  +  I++P+  RL
Sbjct: 273 GGGATTESVYEALTLISKMSRVKGILVNLYGGIVKTTVVAEAFLKAYDDKLIDLPVFARL 332

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +G   +    ++  S   +  ++  +DA    V  VK
Sbjct: 333 KGTESEKAKEMLKGSRTKIFDSV--EDAINAAVMGVK 367


>gi|118575316|ref|YP_875059.1| succinyl-CoA synthetase, beta subunit [Cenarchaeum symbiosum A]
 gi|118193837|gb|ABK76755.1| succinyl-CoA synthetase, beta subunit [Cenarchaeum symbiosum A]
          Length = 365

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 198/379 (52%), Gaps = 27/379 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQAK L  +Y + V +G     +  A    K +  P +V+K Q+  GGRGK        
Sbjct: 2   EYQAKELFAEYGIKVPQGRASKGIEQARKDAKDIGYP-FVIKIQVPVGGRGKA------- 53

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG++  ++   ++    ++   T+        G R   + +E  ADI +ELYLSL +
Sbjct: 54  ---GGIQKCTNEDELVLRYPQVYDLTI-------KGERARAILLEKMADISKELYLSLFL 103

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +R+      IAS +GG++IE V     +++       L  V+ E  A +   + L+G A 
Sbjct: 104 NRSKRCYTVIASAEGGVEIESVKSQIIKEV------GLGKVSPEVAAQVASEMGLEGAAA 157

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
            D  D+   L     +K+  L EINPL I+ +G L  LD K+  DDNA +RH ++++ R+
Sbjct: 158 KDLSDILQKLSLLTTEKEAELAEINPLAILSDGTLLALDGKVMTDDNAAFRHQELEKYRE 217

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
            SE + R   A++   S + LDGNI  + NGAGL M+T+D++   GG PA FLDVGGGA 
Sbjct: 218 SSELEER---AQKSGFSLVELDGNIAVVGNGAGLVMSTLDMLSDSGGRPACFLDVGGGAT 274

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
            + V  A  +I     VKGIL+N++GGI++   +    L A  +  +++P+  RL GA  
Sbjct: 275 TESVYEALTLINKMDRVKGILVNLYGGIVKTTTIASAFLKAYDDGIVDLPVYARLRGAES 334

Query: 365 DIGNRLIAESGLNVITAID 383
           D    ++  S  N+   ++
Sbjct: 335 DKAREMLKSSSTNLYDTVE 353


>gi|115402819|ref|XP_001217486.1| hypothetical protein ATEG_08900 [Aspergillus terreus NIH2624]
 gi|114189332|gb|EAU31032.1| hypothetical protein ATEG_08900 [Aspergillus terreus NIH2624]
          Length = 294

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 166/287 (57%), Gaps = 7/287 (2%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  L+T QT P+G  V  +Y+    DI +E YL++  DR       + S +GG+++E 
Sbjct: 1   MLGHRLVTNQTPPSGLPVEQLYIYRAVDIAKEYYLAVTFDREKATPVLLMSDEGGVNVES 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG-GDLFPNLYKAFCDKDMS 204
                 +  F        G+T E +A +         A I     +   L + F +KD  
Sbjct: 61  NVNQLQRFRFHFST----GITHEIIAYIEAQFGFS-DAEIGAISHILHQLVRLFREKDAI 115

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           LLE+NPL     G    LD+K++FDD+A +R  D+  L +   E+  E EA Q  LSY+ 
Sbjct: 116 LLELNPLARTTEGSFICLDAKMNFDDSARFRQHDLFCLEEHPPEEKDEYEASQLGLSYVR 175

Query: 265 LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
           LDGNIG +VNGAGLAMAT D++ LYGG  ANFLD+GGGA ++ ++ AF I+  D+ +K +
Sbjct: 176 LDGNIGVIVNGAGLAMATNDLVTLYGGKCANFLDIGGGATRETLSKAFSILQGDARIKAL 235

Query: 325 LINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRL 370
           L+NI+GGI+RCD++ + IL+A         P+V+RL+G N + G+ L
Sbjct: 236 LVNIYGGIVRCDMVAESILAAYAATGGFRFPVVVRLQGTNCEEGSHL 282


>gi|257388754|ref|YP_003178527.1| succinyl-CoA synthetase subunit beta [Halomicrobium mukohataei DSM
           12286]
 gi|257171061|gb|ACV48820.1| succinyl-CoA synthetase, beta subunit [Halomicrobium mukohataei DSM
           12286]
          Length = 382

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/394 (34%), Positives = 214/394 (54%), Gaps = 22/394 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     VP     + ++V  A  A + +  P+  +K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKQVFADAGVPTPASTLATTVDEAVDAAEEIGYPV-AIKAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +         +ILG  L        G  V+ V VE+  D + ELY+
Sbjct: 57  -------GGIKLAENADEAREYADDILGMDL-------KGLHVDRVLVEEAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P+ I +  IDP  G+       +     + 
Sbjct: 103 GVTMDRGEGKPVAMVSTRGGVNIEEVAEEEPEAIAREHIDPAFGMHHYQARKVVYDAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY  + DKD S  EINPL++  +  +   D+ ++ DD+AL+RH D++
Sbjct: 163 REVANDVAGVLKTLYDLWEDKDGSDAEINPLMVTADDEVIAADAVMNVDDDALFRHPDLE 222

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            + D ++  D  E +A ++   Y+ L GN+G + NGAGL M T+D++  +GG PANFLDV
Sbjct: 223 AMEDEADGGDELEQKADEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDHFGGEPANFLDV 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMR 358
           GGGA   ++A A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I  P+V+R
Sbjct: 283 GGGAKAQRIANALDMVFSDDNVDSVVFNIFGGITRGDEVAKGINQALEQFDEIPKPVVVR 342

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           L G N   G  ++ E  + V     L+DA ++ V
Sbjct: 343 LAGTNATEGMEILNEDLVTVEQT--LEDAVERAV 374


>gi|20094168|ref|NP_614015.1| succinyl-CoA synthetase beta subunit [Methanopyrus kandleri AV19]
 gi|19887184|gb|AAM01945.1| Succinyl-CoA synthetase beta subunit [Methanopyrus kandleri AV19]
          Length = 359

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 212/394 (53%), Gaps = 41/394 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + + EYQAK LL++  VP+ +G V  +   A      L GP+  VK+Q+  G RGK    
Sbjct: 2   IRLLEYQAKHLLKEAGVPIPEGDVARTSADAARIAAELGGPV-AVKAQVPVGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+      +      R++LGS +        G  V  V VE+  DI  E Y+
Sbjct: 58  -------GGILFADDPEGARKAARKLLGSRI-------RGETVRKVLVEEKLDIAEEWYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       + S +GG+DIEEV     +KI +  +DP++G+   +         + 
Sbjct: 104 SITLDRAKRRPVLLVSREGGVDIEEVPD---EKIARRYLDPILGLRPFEAREAILEAGIP 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRHLDI 239
            +   D  ++  ++Y+ F   D  L+EINPL++ +NG +   D+ ++ D++A   RH + 
Sbjct: 161 KEHLRDVEEVITSMYEVFESYDAHLVEINPLVLTENGEVVAADAVVNLDEDAANIRHPEF 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E              +  +  ++ LDG+IG + NGAGL MAT+D++K  GG PANFLDV
Sbjct: 221 AE--------------ETRDFPFVELDGDIGIIANGAGLTMATIDLVKDLGGKPANFLDV 266

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA    +  A  +  ++  VK IL+NIFGGI RCD + +GI+ A+ +V  ++PLV+RL
Sbjct: 267 GGGAYPTLIRRAI-LTVAELDVKVILLNIFGGITRCDEVAEGIVQALDDV--DVPLVVRL 323

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
            G N + G+R++ E G++V T  +L +A ++ V 
Sbjct: 324 VGTNEEEGHRILREHGVDVYT--ELKEAVERAVE 355


>gi|296454191|ref|YP_003661334.1| succinate--CoA ligase [Bifidobacterium longum subsp. longum JDM301]
 gi|296183622|gb|ADH00504.1| Succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 400

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 206/389 (52%), Gaps = 36/389 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPDAIFAQNSHEVAEAADKIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L      D+A+  +M +  
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDAL---GDFDLAAATEMAQSI 159

Query: 181 G--QARID-GGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDN 231
           G   A +D    +   +++ F D D +L+EINPL  +         +L  LD+KIS DDN
Sbjct: 160 GFYHADVDQAAQILLKMWRCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDN 219

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH       D+   D  E  A++H L Y+ L G +G + NGAGL M+++D +   G 
Sbjct: 220 ASFRHDGWARFVDLIVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGE 279

Query: 292 A------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
                  PANFLD+GGGA    +A + +I+ SD  V+ + IN++GGI  C  +  GIL A
Sbjct: 280 EQGTNIKPANFLDIGGGASAAVMAESLEIVLSDPQVESVFINVYGGITSCVEVANGILEA 339

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAES 374
           V ++  + P+V+R +G     G  ++A +
Sbjct: 340 VAKLGGSKPIVVRFDGNAAAEGLHILASA 368


>gi|261337762|ref|ZP_05965646.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bifidobacterium
           gallicum DSM 20093]
 gi|270277215|gb|EFA23069.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bifidobacterium
           gallicum DSM 20093]
          Length = 399

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 216/408 (52%), Gaps = 39/408 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP--GPLYVVKSQIHAGGRGKGR 58
           M+++EYQA+ LL++  +P  + +   +V   E  ++ LP  G   V+K Q   G RG+  
Sbjct: 1   MDLYEYQARELLQEAGIPTPEAIYARNV---EEVVEALPSMGLPAVIKGQAKIGHRGQA- 56

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G VR+  +++   +    IL  ++        G  +N V V    DI  E 
Sbjct: 57  ---------GAVRLVRTVEEAKAAAEHILPMSI-------QGHEINGVLVAQAKDIRNEY 100

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+ VDR++     +A++QGG ++E++A++ P  + +L I  L      D A+  DM  
Sbjct: 101 YVSISVDRSTRSFCVLATSQGGTEVEQIAQEQPDAVKRLHISKL---EDFDQAAALDMAA 157

Query: 179 LQGQARID---GGDLFPNLYKAFCDKDMSLLEINPL--IIMKNGRLRV--LDSKISFDDN 231
             G    D    GD+   +++ F   D +L+EINPL  +  ++G L +  LD+K+S D N
Sbjct: 158 QIGFEDADVAQAGDILYRMWQCFTTNDATLVEINPLANVADEDGNLTLCALDAKVSLDGN 217

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH   Q   D    D+ E  A+   + Y+ LDG +G + NGAGL M+++D +   G 
Sbjct: 218 AAFRHDGWQRFTDTRVADTLEARAQAAGMHYVHLDGQVGVIGNGAGLVMSSIDAVTFAGR 277

Query: 292 A------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
           A       ANFLD+GGGA  + +  + + + +D  V+ + IN++GGI  C+ +  GIL A
Sbjct: 278 AQGNGISAANFLDIGGGASAEAMCRSLETVLADPKVESVFINVYGGITSCEQVALGILQA 337

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVI-TAIDLDDAAQKIV 392
           ++E+ ++ PLV+R +G     G R++ ES L+ +  A  ++ AA + V
Sbjct: 338 IEELGVSKPLVVRFDGNAASEGLRILRESKLDTVHVAETMEQAATQAV 385


>gi|119025826|ref|YP_909671.1| succinyl-CoA synthetase beta chain [Bifidobacterium adolescentis
           ATCC 15703]
 gi|118765410|dbj|BAF39589.1| succinyl-CoA synthetase beta chain [Bifidobacterium adolescentis
           ATCC 15703]
          Length = 395

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 205/387 (52%), Gaps = 30/387 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAIFAQNSHEVAEAADQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKTRDESILASEDILPMTIHKH-------KVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALDDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  +       +  L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKSLCALDAKISLDDNASF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L G++G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFTDPIYVDPYEQKAREHGLHYVHLKGSVGVIGNGAGLVMSSLDAVSGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + ++ +  I+ SD  V+ +LIN++GGI  C+ + KGIL A+ E
Sbjct: 283 TNVKPANFLDIGGGASAEVMSNSLGIVLSDPQVESVLINVYGGITSCEQVAKGILEALDE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG 375
           +  + P+V+R +G     G  ++A++G
Sbjct: 343 LGSSKPIVVRFDGNAAAEGLNILAQAG 369


>gi|289580418|ref|YP_003478884.1| succinyl-CoA synthetase subunit beta [Natrialba magadii ATCC 43099]
 gi|289529971|gb|ADD04322.1| succinyl-CoA synthetase, beta subunit [Natrialba magadii ATCC
           43099]
          Length = 385

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 208/401 (51%), Gaps = 23/401 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     VP     + S V    +A + +  P+  VK+Q+  GGRGK    
Sbjct: 3   MKLHEYQAKQVFADAGVPTPSSQLASDVDGVLTAAEEIGYPV-AVKAQVQVGGRGKA--- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +  + +        I+G  L        G  V  V VE   D   ELY+
Sbjct: 59  -------GGIELVENDEEAREAAESIIGMDL-------KGYHVGQVLVEGAVDFTDELYV 104

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  IDP  G+             + 
Sbjct: 105 GITMDRGEGKPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKAVYDAGVD 164

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY  +  +D S  EINPL++  +  +   D+ ++ D++AL+R  ++ 
Sbjct: 165 KSVANDVASVLTTLYDLWESRDGSDAEINPLMVTADDEVIAADAVMNIDEDALFRQPELA 224

Query: 241 ELRDVSEEDSREIEAK--QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           E+ + +     E+E K  ++   Y+ L+GN+G + NGAGL M T+D++  YGG PANFLD
Sbjct: 225 EMEEEAASGGDELEQKADEYGFDYVRLEGNVGIIGNGAGLVMTTLDLVDYYGGEPANFLD 284

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVM 357
           VGGGA  +++A A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I  P+V+
Sbjct: 285 VGGGAKAERIANALDMVFSDDNVDSVVFNIFGGITRGDEVAKGINEALEQFDEIPKPVVV 344

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           RL G N + G  ++ E  + V     L+DA Q+ V   + V
Sbjct: 345 RLAGTNWEEGMEILNEDLVTVEQT--LEDAVQRTVEYAEEV 383


>gi|23335120|ref|ZP_00120358.1| COG0045: Succinyl-CoA synthetase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|23465310|ref|NP_695913.1| succinyl-CoA synthetase beta chain [Bifidobacterium longum NCC2705]
 gi|189439319|ref|YP_001954400.1| succinyl-CoA synthetase subunit beta [Bifidobacterium longum
           DJO10A]
 gi|227547254|ref|ZP_03977303.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239621478|ref|ZP_04664509.1| succinyl-CoA synthetase beta chain protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|312132693|ref|YP_004000032.1| succ [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483242|ref|ZP_07942237.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689204|ref|YP_004208938.1| succinyl-CoA synthase subunit beta [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691270|ref|YP_004220840.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|23325949|gb|AAN24549.1| succinyl-CoA synthetase beta chain [Bifidobacterium longum NCC2705]
 gi|189427754|gb|ACD97902.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium longum
           DJO10A]
 gi|227212213|gb|EEI80109.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239515939|gb|EEQ55806.1| succinyl-CoA synthetase beta chain protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|291516878|emb|CBK70494.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bifidobacterium
           longum subsp. longum F8]
 gi|311773651|gb|ADQ03139.1| SucC [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915311|gb|EFV36738.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456126|dbj|BAJ66748.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320460540|dbj|BAJ71160.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 400

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 205/389 (52%), Gaps = 36/389 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPDAIFAQNSHEVAEAADKIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L      D+A+  +M +  
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDAL---GDFDLAAATEMAQSI 159

Query: 181 G--QARID-GGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDN 231
           G   A +D    +   +++ F D D +L+EINPL  +         +L  LD+KIS DDN
Sbjct: 160 GFYHADVDQAAQILLKMWRCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDN 219

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH       D    D  E  A++H L Y+ L G +G + NGAGL M+++D +   G 
Sbjct: 220 ASFRHDGWARFVDPIVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGE 279

Query: 292 A------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
                  PANFLD+GGGA    +A + +I+ SD  V+ + IN++GGI  C  +  GIL A
Sbjct: 280 EQGTNIKPANFLDIGGGASAAVMAESLEIVLSDPQVESVFINVYGGITSCVEVANGILEA 339

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAES 374
           V ++  + P+V+R +G     G  ++A +
Sbjct: 340 VAKLGGSKPIVVRFDGNAAAEGLHILASA 368


>gi|291456793|ref|ZP_06596183.1| succinyl-CoA synthetase, beta subunit [Bifidobacterium breve DSM
           20213]
 gi|291382070|gb|EFE89588.1| succinyl-CoA synthetase, beta subunit [Bifidobacterium breve DSM
           20213]
          Length = 400

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 199/386 (51%), Gaps = 30/386 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPGAIFAQNSHEVAEAADKIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L     E    +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDALDDFDLEAATKMAASIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  +         +L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWQCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII------KL 288
           RH       D    D  E  A++H L Y+ L G +G + NGAGL M+++D +      + 
Sbjct: 223 RHDGWARFVDPIVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGEEQR 282

Query: 289 YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
            G  PANFLD+GGGA    +A + +I+ SD  V+ + IN++GGI  C  +  GIL AV +
Sbjct: 283 SGIKPANFLDIGGGASATVMAESLEIVLSDPQVESVFINVYGGITSCVEVANGILEAVAK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAES 374
           +  + P+V+R +G     G  ++AE+
Sbjct: 343 LGGSKPIVVRFDGNAAAEGLHILAEA 368


>gi|294101518|ref|YP_003553376.1| Succinate--CoA ligase (ADP-forming) [Aminobacterium colombiense DSM
           12261]
 gi|293616498|gb|ADE56652.1| Succinate--CoA ligase (ADP-forming) [Aminobacterium colombiense DSM
           12261]
          Length = 377

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 224/403 (55%), Gaps = 33/403 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q K L  +  + V K  ++ S    E    TL  PL V+KSQ+ +GGRGK    
Sbjct: 1   MKLYEFQGKELFARCGISVPKRRLVRSFEDLE----TLDAPL-VLKSQVLSGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V     S++ + + ++GS+L        G RV  +  E+  DIL+E YL
Sbjct: 53  -------GGVVVCDDNASLVQEGKRLIGSSL-------KGERVLALLAEEKVDILQEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++D        IAS  GGM+IE+VA++ P+KI KL  DPL G +      + D L L+
Sbjct: 99  SFVIDGELKKPLIIASAAGGMEIEKVAEEEPEKILKLSFDPLAGPSDYHFRRIADFLSLR 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI- 239
            + + D   +   +Y  F   D SL+EINPL+    G L  LDSKI+ DD+A +R  +I 
Sbjct: 159 NELK-DLRKVLRAMYALFNQYDASLIEINPLVKTSAG-LIALDSKINLDDDAEFRQKEIF 216

Query: 240 ---QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
              QE ++V ++++ + +  +  ++Y+ LDGNIG + +GAG  M ++D+I+ +GG  A+F
Sbjct: 217 QEFQEQQNVIQQNNAKAK-DEGTITYVPLDGNIGMISDGAGTGMLSLDLIRDFGGEAADF 275

Query: 297 LDVGGGADQDKVAAAFKIITSDSS--VKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
            ++GG    D +  A + + + ++  +K +L+ + GG  R D + +GI+    +  +++P
Sbjct: 276 CEMGGLTSPDVMYQAMETVFNRATKELKSLLVILIGGFNRMDEMAEGIIRYKNDHGLSVP 335

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           L +RL G     G +++ +SGL V    DL++A +K V A +G
Sbjct: 336 LFVRLCGTMETEGKKMMIDSGLPVFD--DLEEAVEKAVMAAEG 376


>gi|218904965|ref|YP_002452799.1| succinyl-CoA synthetase beta chain [Bacillus cereus AH820]
 gi|218538546|gb|ACK90944.1| succinyl-CoA synthetase beta chain [Bacillus cereus AH820]
          Length = 233

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 146/243 (60%), Gaps = 18/243 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   +   
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            EL GQA          LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH
Sbjct: 171 KELVGQAV----KFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRH 226

Query: 237 LDI 239
            DI
Sbjct: 227 KDI 229


>gi|51893671|ref|YP_076362.1| succinyl-CoA synthetase beta subunit [Symbiobacterium thermophilum
           IAM 14863]
 gi|51857360|dbj|BAD41518.1| succinyl-CoA synthetase beta subunit [Symbiobacterium thermophilum
           IAM 14863]
          Length = 373

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 198/381 (51%), Gaps = 27/381 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY AK +  ++ VP   G++ ++   AE A + + GP   +K+Q+  GGRGK    
Sbjct: 1   MKLYEYLAKQMFAEHGVPTGNGILCTTPEEAEEAARKI-GPC-AIKAQVLVGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++ +      REILG  L        G  V+ V V+    I +E Y+
Sbjct: 56  -------GGIKLANTPEEARERAREILGMNL-------KGYIVDKVLVDPQIKIEKEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D  +     +AS  GG++IE V  D   KI    ID   G+       +   + L 
Sbjct: 102 SITLDGMAKKPLVMASEYGGVEIESVPHD---KIVFEHIDIETGLLPFQAREIARKINLT 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI 239
           G        +   LY+AF   D  L+EINPL +   G RL   D + + +D+AL+RH   
Sbjct: 159 GDLADQFVRILTGLYQAFRKYDAELVEINPLALTDGGTRLIAADGRFNVEDDALFRH--- 215

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E   V E    E + +   L+++ LDG+I  M NGAG+AM T+D +  YGG PANFLD 
Sbjct: 216 PEFPRVEEGTELEKKVRAIGLAFVQLDGDIAVMANGAGMAMGTLDTLAYYGGRPANFLDA 275

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGG+  +  A AF  +   +  K I +NIFGGI RCD++ + I+   K   I++PLV+R+
Sbjct: 276 GGGSGVEPTAQAFDALLG-TKPKAIFVNIFGGITRCDLVAEAIVQVKKAKGIDVPLVVRM 334

Query: 360 EGANVDIGNRLIAESGLNVIT 380
            G N   G  ++AE+G+   T
Sbjct: 335 VGTNDVRGREILAEAGIQAYT 355


>gi|70607032|ref|YP_255902.1| succinyl-CoA synthetase beta chain [Sulfolobus acidocaldarius DSM
           639]
 gi|68567680|gb|AAY80609.1| succinyl-CoA synthetase beta chain [Sulfolobus acidocaldarius DSM
           639]
          Length = 337

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 209/380 (55%), Gaps = 59/380 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K L +   +P+ KGVV  S    +           VVK+Q+  G RGK    
Sbjct: 1   MKLYEYEGKELFKAVGIPIPKGVVTDSPIKWDGKA--------VVKAQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G V+V  +++  I++++++     + ++  P                 RELY+
Sbjct: 49  ------RGLVKVTDNVEQTIAEMKKLGIQKFLVEEFIPH---------------TRELYI 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +      AST+GG+DIE  +     KIF + ++   G+ S DV ++   L ++
Sbjct: 88  SALIDRDTAEPIIAASTEGGIDIESNSN---VKIFHIPMER--GIRSYDVYNIEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD-I 239
           G   I  G     LY+   + D  L EINPL +  +G++  LDSK+  +DNAL+RH D I
Sbjct: 143 GIEPILKG-----LYRLITEFDAELAEINPLAVTNDGKIIALDSKVILEDNALFRHEDLI 197

Query: 240 QEL-RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           Q+L R  +E +            Y+ LDG++G + NGAGL MATMD++K+ GG PA+F D
Sbjct: 198 QKLGRKPAESN------------YVELDGDVGIIGNGAGLTMATMDMVKIMGGNPADFFD 245

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA +++V  A   I S+  VK I++NI+ GI RCD +  GI+ A+K VK  IP+ +R
Sbjct: 246 IGGGAGRERVKEAIINIASNKKVKKIVMNIYSGITRCDEVAMGIVEALKIVK--IPIYVR 303

Query: 359 LEGANVDIGNRLIAESGLNV 378
           L G N + G R++ E+G+ V
Sbjct: 304 LVGTNEEEGRRILRENGIPV 323


>gi|330834511|ref|YP_004409239.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Metallosphaera
           cuprina Ar-4]
 gi|329566650|gb|AEB94755.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Metallosphaera
           cuprina Ar-4]
          Length = 336

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 207/380 (54%), Gaps = 59/380 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M ++EY+ K +     +P+ KG VV S V+        +PG + VVK+Q+  GGRGK   
Sbjct: 1   MKLYEYEGKKIFSIVGIPIPKGQVVYSPVN--------VPGKV-VVKAQLLEGGRGK--- 48

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  +G VRV     S ISD+ +   ST +               +E+     RE+Y
Sbjct: 49  -------RGLVRVTEDSFSTISDMMKEGISTFL---------------IEEFVSHDREIY 86

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S ++DR SG    I S  GG++IEE +KD   + F + +D  +     DV ++   +  
Sbjct: 87  ISAMMDRESGNPMIIISPNGGINIEE-SKDV--RTFVIPLDRTL--MRYDVDAMEKYVGY 141

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G   I  G     L K   + D  L EINPL I + G L  LDSK+  DDNAL+RH ++
Sbjct: 142 RGLTPIVQG-----LLKLLLEYDAELAEINPLAITERGAL-ALDSKVILDDNALFRHEEL 195

Query: 240 -QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
             ELR       RE   K  + SY+ LDG+IG + NGAGL MATMD++KL GG PA+F D
Sbjct: 196 LNELR-------RE---KPASDSYVELDGDIGIIGNGAGLTMATMDLVKLMGGNPADFFD 245

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGAD  KVA A + + ++  VK I+INIFGGI RCD + KGIL      K+N P+ +R
Sbjct: 246 VGGGADMQKVAFAIERVGTNPRVKKIVINIFGGITRCDEVAKGILDG--HSKVNKPIYVR 303

Query: 359 LEGANVDIGNRLIAESGLNV 378
           L G   D G  ++ ++G+ V
Sbjct: 304 LTGTKEDEGKEILTKAGIKV 323


>gi|332797165|ref|YP_004458665.1| succinyl-CoA synthetase subunit beta [Acidianus hospitalis W1]
 gi|332694900|gb|AEE94367.1| succinyl-CoA synthetase beta subunit [Acidianus hospitalis W1]
          Length = 335

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 204/378 (53%), Gaps = 58/378 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVIS-SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M ++EY+ K L  K  + +  G+V   ++     A         VVK+QI  GGRGK   
Sbjct: 1   MKLYEYEGKLLFSKVGIKIPHGIVTEGNIDWKGKA---------VVKAQILEGGRGK--- 48

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  +G V+V   + S I ++R++                +N   VE+     RE+Y
Sbjct: 49  -------RGLVKVTDDVNSTIQEMRKL---------------GINKFLVEEYIPHDREVY 86

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+++DR +     IAS  GG+DIE   +     + K +I    G    D+  +   L +
Sbjct: 87  LSMILDRDTAEPMLIASPHGGIDIESSGE-----VKKFIIPIERGPRGYDIIEIEKYLGV 141

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G  ++  G     LYK F + D  L+EINPL +  NG +  LDSK+  +DNALY+H D 
Sbjct: 142 KGLFQVIQG-----LYKIFTEYDAELVEINPLAVTDNGVI-ALDSKVILEDNALYKHQDF 195

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L++++ E S +        SY+ LDG+IG + NGAGL MATMD++KL GG PA+F+DV
Sbjct: 196 --LKEINREYSPD--------SYVELDGDIGIIGNGAGLTMATMDMVKLMGGNPADFMDV 245

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGAD+++V      + S+  VK IL+NI+GGI RCD +  GI+ A   +K   P+ +RL
Sbjct: 246 GGGADRERVRYCVIKVGSNPKVKKILVNIYGGITRCDEVALGIVDAYNVIK--KPIFVRL 303

Query: 360 EGANVDIGNRLIAESGLN 377
            G N + G +++ E G+N
Sbjct: 304 VGTNEEEGWKILKEHGIN 321


>gi|150402283|ref|YP_001329577.1| succinyl-CoA synthetase subunit beta [Methanococcus maripaludis C7]
 gi|150033313|gb|ABR65426.1| succinyl-CoA synthetase, beta subunit [Methanococcus maripaludis
           C7]
          Length = 362

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 211/387 (54%), Gaps = 41/387 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++  +P+ K  +          + ++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENGIPIPKNKLTCG------KVDSIDYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L      I  ++G+T+        G  V  V +E+   I +E Y+
Sbjct: 51  -------GGILFSDNLDDANEKIESLIGNTV-------KGEVVEKVLLEEQIKISKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC-DMLEL 179
            ++V+R       I ST+GG+DIEEVA   P+KI KL ++       E +  L  +ML+ 
Sbjct: 97  GVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLPLES----GKEFLPYLAREMLKK 152

Query: 180 QG--QARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            G   A I    D+   +YKAF D D  L EINPL+  ++G++   D+ ++ DD+A +RH
Sbjct: 153 AGIPSAEIPKVADVLCKVYKAFKDMDGILAEINPLVFTEDGKIIAADAVLNIDDDAYFRH 212

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  +  +  +++  E        +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA F
Sbjct: 213 -NYDKFEEFEKQEKSE-------FAYVELDGDIAVIGNGAGLTLASMDIVKEFGGEPACF 264

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGG+ ++ V  A    TS  +VKG  INI GGI RCD +  GI+  + E   N+   
Sbjct: 265 LDVGGGSTRETVKKALLKATSRKNVKGAFINILGGITRCDEVSLGIVDVLNE-NPNLKFA 323

Query: 357 MRLEGANVDIGNRLIAESGLNVITAID 383
           +R+ G N + G ++++E+G++   ++D
Sbjct: 324 VRMMGTNEEEGRKILSENGVSFENSMD 350


>gi|171742918|ref|ZP_02918725.1| hypothetical protein BIFDEN_02035 [Bifidobacterium dentium ATCC
           27678]
 gi|306822729|ref|ZP_07456107.1| succinyl-CoA synthetase [Bifidobacterium dentium ATCC 27679]
 gi|309800964|ref|ZP_07695096.1| succinate-CoA ligase, beta subunit [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278532|gb|EDT46193.1| hypothetical protein BIFDEN_02035 [Bifidobacterium dentium ATCC
           27678]
 gi|304554274|gb|EFM42183.1| succinyl-CoA synthetase [Bifidobacterium dentium ATCC 27679]
 gi|308222500|gb|EFO78780.1| succinate-CoA ligase, beta subunit [Bifidobacterium dentium
           JCVIHMP022]
          Length = 397

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 203/376 (53%), Gaps = 36/376 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +   K V   + H    A + +  P  VVK+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIATPKAVFAQNSHEVAQAAEGIGYPC-VVKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVRLAKTRDEAILASEDILPMTIHKH-------KVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+A+++P+ + +L ID L      D+ +   M E  
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAREHPESVKRLHIDAL---EDFDIEAATKMAESI 159

Query: 181 G--QARID-GGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDN 231
           G   A +D    +   +++ F + D +L+EINPL  +       +  L  LD+KIS DDN
Sbjct: 160 GFYHADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDN 219

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH   +   D    D  E +A++H L Y+ L+G++G + NGAGL M+++D +   G 
Sbjct: 220 AAFRHDGWKRFADPVHVDPFEQKAREHGLHYVHLNGSVGVIGNGAGLVMSSLDAVSGAGE 279

Query: 292 ------APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
                  PANFLD+GGGA    +  + +I+ SD  V+ +L+N++GGI  C+ + +GIL A
Sbjct: 280 DQGTNVKPANFLDIGGGASAQVMCDSLEIVLSDPQVESVLVNVYGGITSCEQVAEGILEA 339

Query: 346 VKEVKINIPLVMRLEG 361
           + ++  + PLV+R +G
Sbjct: 340 LDKLGSSKPLVVRFDG 355


>gi|134045522|ref|YP_001097008.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Methanococcus
           maripaludis C5]
 gi|132663147|gb|ABO34793.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanococcus
           maripaludis C5]
          Length = 362

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 213/387 (55%), Gaps = 41/387 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++  +PV K  +          + ++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENGIPVPKNKLTCG------KVDSIEYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L      I  ++G+T+        G  V  V +++   I +E Y+
Sbjct: 51  -------GGILFADNLDDANKKIESLIGNTV-------KGELVEKVLLDEQIKIAKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC-DMLEL 179
            ++V+R       I ST+GG+DIEEVA   P+KI KL ++       E +  L  +ML+ 
Sbjct: 97  GVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLPLES----GKEFLPYLAREMLKK 152

Query: 180 QG--QARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            G   A I    D+   +YKAF + D  L EINPL+  ++G++   D+ ++ DD+A +RH
Sbjct: 153 AGIPSAEIPKVADVLCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNIDDDAYFRH 212

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
                  D  EE  ++   ++   +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA F
Sbjct: 213 K-----YDKFEEFKKQ---EKSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGEPACF 264

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGG++++ V  A    TS  +VKG  INI GGI RCD +  GI+  +KE   N+   
Sbjct: 265 LDVGGGSNRETVKKALLKATSRKNVKGAFINILGGITRCDEVSLGIVDVLKE-NPNLKFA 323

Query: 357 MRLEGANVDIGNRLIAESGLNVITAID 383
           +R+ G N + G ++++E+G++   +++
Sbjct: 324 VRMMGTNEEKGRKILSENGVSFENSME 350


>gi|324533349|gb|ADY49301.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 183

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 92/167 (55%), Positives = 130/167 (77%), Gaps = 2/167 (1%)

Query: 222 LDSKISFDDNALYRHLDIQELRDVS--EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLA 279
           +D+K++FDDNA +R  +I  + + S  E ++REI A +HNL+YIAL+G+IGCMVNGAGLA
Sbjct: 6   IDAKLNFDDNAYFRQKEIFAMEEASGSEANAREILASEHNLNYIALEGDIGCMVNGAGLA 65

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           MATMDIIKL+GG+PANFLDVGG   ++ V AAFKIITSD  VK IL+NIFGGI+ C V+ 
Sbjct: 66  MATMDIIKLHGGSPANFLDVGGTVSEEAVCAAFKIITSDPQVKAILVNIFGGIVSCLVIA 125

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            G+++A K++++ +PL++RLEG        ++  SGL +ITA+++D+
Sbjct: 126 NGLVAACKKIELKVPLIIRLEGTKAVEAREVLKASGLPLITAVNMDE 172


>gi|311744694|ref|ZP_07718491.1| succinyl-CoA ligase subunit beta [Aeromicrobium marinum DSM 15272]
 gi|311312003|gb|EFQ81923.1| succinyl-CoA ligase subunit beta [Aeromicrobium marinum DSM 15272]
          Length = 389

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 140/409 (34%), Positives = 207/409 (50%), Gaps = 35/409 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VPV  G+V ++   A++A + L   +   + +            
Sbjct: 1   MDLMEYQAKELFAKHGVPVTTGIVATTPDEAKAAAEQLGVVVVKAQVKAGG--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G  VN V +   A I  E Y 
Sbjct: 52  ---RGKAGGVKLAKTPDEAHQHASNILGMQI-------KGLTVNRVLIAPAATIEEEYYF 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
           S L+DR +     IAS +GG++IEEVAK  P  + ++ ID   GV      E VA     
Sbjct: 102 SFLLDRANRSYLCIASVEGGVEIEEVAKTNPDAVKQIPIDAGAGVDDAKAREIVAEAGFP 161

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             L  QA          L+K F ++D +L+E+NPL  ++   L  LD K+S D+NA +RH
Sbjct: 162 EALTEQAVT----TVLTLWKTFVEEDATLVEVNPLARLEGDVLEALDGKVSLDENAEFRH 217

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGA 292
            D     D +  D  E +AK   L+Y+ LDG +G + NGAGL M+T+D++    + +GG 
Sbjct: 218 DDHAGFEDKAAADPLEAKAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGV 277

Query: 293 -PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
            PANFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI  A++ +  
Sbjct: 278 KPANFLDIGGGASAQVMADGLDVILGDDQVKSVFVNVFGGITSCDAVANGIKGALELLGD 337

Query: 352 NI--PLVMRLEGANVDIGNRLIAESGLNVITAID-LDDAAQKIVHAVKG 397
           N   PLV+RL+G NVD G  ++ E    ++T ++ +D AA K      G
Sbjct: 338 NATKPLVVRLDGNNVDEGRAILDELNHPLVTQVETMDGAADKAAELANG 386


>gi|283456060|ref|YP_003360624.1| succinyl-CoA synthetase subunit beta [Bifidobacterium dentium Bd1]
 gi|283102694|gb|ADB09800.1| Succinyl-CoA synthetase beta chain [Bifidobacterium dentium Bd1]
          Length = 397

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 204/379 (53%), Gaps = 42/379 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +   K V   + H    A + +  P  VVK+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIATPKAVFAQNSHEVAQAAEGIGYPC-VVKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVRLAKTRDEAILASEDILPMTIHKH-------KVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+A+++P+ + +L ID L      D+ +   M E  
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAREHPESVKRLHIDAL---EDFDIEAATKMAESI 159

Query: 181 G--QARID-GGDLFPNLYKAFCDKDMSLLEINPLIIM------KNGRLRVLDSKISFDDN 231
           G   A +D    +   +++ F + D +L+EINPL  +       +  L  LD+KIS DDN
Sbjct: 160 GFYHADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDN 219

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RH   +   D    D  E +A++H L Y+ L+G++G + NGAGL M+++D +    G
Sbjct: 220 AAFRHDGWKRFADPVHVDPFEQKAREHGLHYVHLNGSVGVIGNGAGLVMSSLDAVS---G 276

Query: 292 A---------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           A         PANFLD+GGGA    +  + +I+ SD  V+ +L+N++GGI  C+ + +GI
Sbjct: 277 ASEDQGTNVKPANFLDIGGGASAQVMCDSLEIVLSDPQVESVLVNVYGGITSCEQVAEGI 336

Query: 343 LSAVKEVKINIPLVMRLEG 361
           L A+ ++  + PLV+R +G
Sbjct: 337 LEALDKLGSSKPLVVRFDG 355


>gi|322702427|gb|EFY94077.1| succinyl-CoA synthetase beta chain [Metarhizium anisopliae ARSEF
           23]
          Length = 353

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 18/305 (5%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +L   L+TK  G  G  V  ++V + A    + YL++ +DR +   A I S +GG++++ 
Sbjct: 1   MLNQRLLTKDNGTDGHVVEKLFVAEAATYDSQWYLAMTIDRENYQPAIIVSKEGGVELDV 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +  + P  +F        G+T+  V  +   L    Q   +   +   LY  F D++ + 
Sbjct: 61  LISERPDSLFTFGFGISEGITNALVQDIQQRLGTTDQETANLTHILTQLYSIFRDREATH 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LEINPL    +G    L++   FD  A  R  ++  LRD ++E   E+EA++H L Y+ +
Sbjct: 121 LEINPLGRSLDGSFTSLNANFKFDKAAEQRQEEVSALRDKAQEVPDEVEAEKHGLVYVRM 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIG +VNGAGLAMAT D I  +GGA ANFLD GG A +D +  AF+IIT D  VK IL
Sbjct: 181 DGNIGNVVNGAGLAMATNDAIGFHGGASANFLDAGGKATKDTMIQAFRIITRDERVKAIL 240

Query: 326 INIFG------------------GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           +NI+G                  GI +CD++ + I+ A  E+ I +P+V+RL+G N + G
Sbjct: 241 VNIYGGTYVIGRWSMGKLTGGRVGITQCDMIAESIIGATSELDIQVPMVVRLQGTNSEKG 300

Query: 368 NRLIA 372
            ++++
Sbjct: 301 LKMVS 305


>gi|310796925|gb|EFQ32386.1| CoA-ligase [Glomerella graminicola M1.001]
          Length = 278

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/261 (40%), Positives = 155/261 (59%), Gaps = 11/261 (4%)

Query: 148 KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLE 207
           + YP++     +    G+T E V S+   L+   + R     +   LYK F  KD +LLE
Sbjct: 3   QQYPEQFRTFTLGYTRGITREIVESISKFLDASAKERDSLQRILGRLYKVFTAKDATLLE 62

Query: 208 INPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG 267
           I  L    +G L  LD ++ FDD A  R +D+  LRDV  E S E+EA+++ L Y+ +DG
Sbjct: 63  IGSLARSHDGTLTCLDVRVVFDDAASKRQVDVFSLRDVMHEISEEVEAEKYGLVYVKMDG 122

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILIN 327
           NIG +VNGAGLAMAT D I LYGG+ ANFLD GG A +  +  AF+II  D  VK IL+N
Sbjct: 123 NIGNVVNGAGLAMATNDAIALYGGSSANFLDAGGQATKHTMVKAFEIILRDERVKTILVN 182

Query: 328 IFGG----------IMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLIAESGL 376
           I+GG          I+RCD++ + I+ A K++  + +P+V+RL+G N ++G +++ E+ L
Sbjct: 183 IYGGKSDRAWCNRWIIRCDMIAESIVGAAKQLGPLKVPMVVRLQGTNSELGLKILEEADL 242

Query: 377 NVITAIDLDDAAQKIVHAVKG 397
            + T  D   AA+K V   +G
Sbjct: 243 GLHTEADFGKAAEKAVELARG 263


>gi|288561080|ref|YP_003424566.1| succinyl-CoA synthetase beta subunit SucC [Methanobrevibacter
           ruminantium M1]
 gi|288543790|gb|ADC47674.1| succinyl-CoA synthetase beta subunit SucC [Methanobrevibacter
           ruminantium M1]
          Length = 374

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 207/393 (52%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   E+ AK +     + + +G V+ S   A         P+ V+KSQ+  GGRGK    
Sbjct: 1   MKFFEHSAKKVFESEGIKILEGHVVYSPEEAMEVATEFGRPI-VLKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +    +    E+L   +        G +V  + +E+ A+I +E +L
Sbjct: 57  -------GGIKFADNPGEALEIANELLKLEI-------KGEKVKHLLIEEKANIKKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+  DR +     +AS +GG++IEE+AK  P+KI +  ++PL      +   +   + + 
Sbjct: 103 SVSNDRANRRPIIMASAEGGVEIEELAKTSPEKIIRYNVNPLKEFLPYEAREIARKMGVG 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   LY  +   D  + EINPLI+  +G L   D+K+  +++AL+RH D+ 
Sbjct: 163 SELISPLGSIIWKLYNVYDKYDAEVAEINPLILTDDG-LIAADAKLEIENDALFRHQDL- 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     ++   KQ + +++ LDG+I  + NGAGL +  MD++ L+GG PA FLD+G
Sbjct: 221 ---------VKQNRFKQKDFAFVKLDGDIAVIGNGAGLTLTGMDMVTLFGGKPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  A  ++ +   VK + +N+ GGI R D + +G+++A++  K ++ +V+RL 
Sbjct: 272 GGASEETINKALSLVLNYPPVKVVFLNVLGGITRADDVARGVIAALEANKWDVNIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N + G RL  E+G  +   I L++AA+K V 
Sbjct: 332 GTNEEEGQRLFDEAG--IPYEISLEEAAKKAVE 362


>gi|219852541|ref|YP_002466973.1| succinyl-CoA synthetase, beta subunit [Methanosphaerula palustris
           E1-9c]
 gi|219546800|gb|ACL17250.1| succinyl-CoA synthetase, beta subunit [Methanosphaerula palustris
           E1-9c]
          Length = 360

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 206/383 (53%), Gaps = 34/383 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK +     + V +GVVI+S     S    +P    V+K+Q+  GGRGK    
Sbjct: 1   MKLREYEAKRIFGAAGIQVPRGVVITSPEEITSV--AMPADKVVLKAQVDVGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +        +   ++ G T+        G  V+ V VE+   I  E +L
Sbjct: 56  -------GGILL-CPAAEATATATDLFGRTI-------KGLPVDQVLVEEQLPITHEYFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     + +  GG+DIE  A      I ++ +  L+     D+ +   + +L 
Sbjct: 101 SIAIDRSTKQPILLFADAGGVDIEATAAASSDAIRRVNVPRLM----TDLPAFV-IRDLL 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  + G +   L+  F +KD  L EINPL+    G +   D+K+  DDNAL+R   I 
Sbjct: 156 GDAPKELGTVINTLWHVFNNKDALLAEINPLVTTTRG-VYAADAKLIIDDNALWRQ-GIT 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD++    RE EA+QH  SY+ LDG+IG + NGAGL MAT+D+I+ Y G  ANFLDVG
Sbjct: 214 QNRDLT---PREREAEQHGFSYVELDGSIGVVGNGAGLTMATLDLIEYYEGKAANFLDVG 270

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQ++V  A +++     V+ I++N+ GGI RCD + +GI+SA     ++  +++R+ 
Sbjct: 271 GGADQERVRFAVQLLAGAPQVQVIIVNLLGGITRCDEVARGIISA----GVSQRVIVRMA 326

Query: 361 GANVDIGNRLIAESGLNVITAID 383
           G N   G  L+A  G  +  ++D
Sbjct: 327 GTNEAEGKALLAAHGYQMYESMD 349


>gi|270684422|ref|ZP_06222810.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
 gi|270316240|gb|EFA28194.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
          Length = 165

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 97/156 (62%), Positives = 129/156 (82%), Gaps = 3/156 (1%)

Query: 215 KNGRLR---VLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
           K G+ R    LD+KIS DDNAL+RH D+  L+D+++ D+RE EA++  L+Y+AL+G+IGC
Sbjct: 9   KQGKARNLVCLDAKISVDDNALFRHKDLLALQDLTQNDAREAEAEKFQLNYVALEGDIGC 68

Query: 272 MVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGG 331
           MVNGAGLAM TMDI+KLYGG PANFLDVGGGA Q++VA AFKII +D SVK IL+NIFGG
Sbjct: 69  MVNGAGLAMGTMDIVKLYGGKPANFLDVGGGATQERVAEAFKIILTDPSVKVILVNIFGG 128

Query: 332 IMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           I+RCD++ +G+++AV EV + +P+V+RLEG N +IG
Sbjct: 129 IVRCDLIAEGVIAAVNEVGVRVPVVVRLEGTNAEIG 164


>gi|4406564|gb|AAD20032.1| GTP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
          Length = 199

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 93/185 (50%), Positives = 129/185 (69%)

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L 
Sbjct: 3   DATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLK 62

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V
Sbjct: 63  YIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKV 122

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
           + IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +A
Sbjct: 123 EAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSA 182

Query: 382 IDLDD 386
           IDL+D
Sbjct: 183 IDLED 187


>gi|213420241|ref|ZP_03353307.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 189

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/189 (50%), Positives = 129/189 (68%)

Query: 106 VYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           + VE   DI +ELYL  +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G 
Sbjct: 1   MLVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGP 60

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
                  L   L L+G+       +F  L   F ++D++L+EINPL+I K G L  LD K
Sbjct: 61  MPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGK 120

Query: 226 ISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDI 285
           +  D NAL+R  D++E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI
Sbjct: 121 LGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDI 180

Query: 286 IKLYGGAPA 294
           +KL+GG PA
Sbjct: 181 VKLHGGEPA 189


>gi|218532112|ref|YP_002422928.1| succinate--CoA ligase (ADP-forming) [Methylobacterium
           chloromethanicum CM4]
 gi|218524415|gb|ACK85000.1| Succinate--CoA ligase (ADP-forming) [Methylobacterium
           chloromethanicum CM4]
          Length = 384

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 194/376 (51%), Gaps = 26/376 (6%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN  E+ AKA +L    +PV + V+  +   A +A   L GP  +VK+Q+  G RGK   
Sbjct: 1   MNFLEHVAKARVLAPAGIPVPRAVLCRTPEEAAAAFGEL-GPC-MVKAQVPTGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG++  ++ +        ILG T+     G        V +E  A I  E Y
Sbjct: 57  --------GGIKPANAAEEARGVAERILGMTIDCHAVG-------AVLLEQQATIASEFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D  S     + ST+GGMDIEEVA   P  + +  +DP  G  +    +L      
Sbjct: 102 AAVLIDTASRCPLVLFSTEGGMDIEEVAATRPDALRRHAVDPEAGFDAAAARAL-LAGLD 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A     D+  +L +     D  L+EINPL ++ +GR+  LD K++ DD+A +R  D+
Sbjct: 161 LGGAEGAVADILASLTETSGRVDAELIEINPLAVLDDGRVVALDCKLTLDDSAAFRQGDL 220

Query: 240 QELRDVSEEDSREIEAK--QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
               + +EE   E+E +     L +I LDG++G + NGAGL M TMD+I   GG PANFL
Sbjct: 221 AA--EAAEEPMTELEREGAAQGLKFIQLDGDVGVLANGAGLTMTTMDVISHCGGRPANFL 278

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           ++GG A   K  AA K++ S+  VK +++N  G   R DV+ +G+++A K +  +IP+  
Sbjct: 279 EIGGEA-YTKSEAALKLVLSNPGVKSLVVNFCGAFARTDVMAEGVVTAWKRLDPDIPVFF 337

Query: 358 RLEGANVDIGNRLIAE 373
            + G   D   RL+ E
Sbjct: 338 SIHGTGEDEAVRLVRE 353


>gi|298528735|ref|ZP_07016139.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512387|gb|EFI36289.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 692

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 198/392 (50%), Gaps = 26/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPLYVVKSQIHAGGRGKGRF 59
           M ++E+ +K LL+   + V +G +I      + A +   P   +VVK+ +  GGRGK   
Sbjct: 1   MKLNEHMSKELLKGAGILVPRGEMIGPGDIRDFAPEFEFP---WVVKAMVLTGGRGKA-- 55

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGVRV  + +   +  R+ILG  +        G  V  V VE  + I RE+Y
Sbjct: 56  --------GGVRVVQNREEFETAARQILGMQI-------KGESVPFVRVEPASHIQREMY 100

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+ +DR    +   A   GG+DIE   +D    I  L +DP +G+    +  +   L+L
Sbjct: 101 LSMTLDRQQKSLVLTAGRTGGVDIESSGRD---NILSLTLDPGLGLHDFQIRRVFFHLDL 157

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                     L  NLY AF    + L EINPL++     L  LD K+  DDN +  +  +
Sbjct: 158 DKSMFRSFSGLLKNLYTAFTRNRLLLAEINPLVLTGGQELTALDGKVELDDNYVQINRGL 217

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                      +E  A +  LSY  LDG +G +VNGAGLAMATMD++   G   ANFLD+
Sbjct: 218 LGYHVPEHLGEQERLAGEAGLSYHRLDGRVGMVVNGAGLAMATMDLLNFSGVPAANFLDL 277

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGADQ++++ A  I+ +D  V+ + INIFGGI+ C+ +   + +A++E  +  P+V+R 
Sbjct: 278 GGGADQERISRALDILFNDPGVELVFINIFGGILSCEKVALALAAALEEASVARPMVVRF 337

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            G       R+I   GLN      + D A+ +
Sbjct: 338 SGFKAREAGRII--QGLNADNIYYVQDLARAL 367


>gi|254559361|ref|YP_003066456.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
           DM4]
 gi|254266639|emb|CAX22412.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           DM4]
          Length = 388

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 197/375 (52%), Gaps = 28/375 (7%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN  E+ AKA  L    +PV + ++  +   A++A + + GP  +VK+Q+  G RGK   
Sbjct: 1   MNFLEHVAKARALAPAGIPVPRAILCRTPEEAQAAFEEI-GPC-MVKAQVPTGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG++  +S +   S    ILG  +     G        V +E+ A I RE Y
Sbjct: 57  --------GGIKPANSAEEARSVAERILGMRIDDHAVG-------SVLLEEQARIAREFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLE 178
            ++L+D        + ST+GGMDIEEVA   P  + +  +DP  G   +   A L  +  
Sbjct: 102 AAVLLDTAGRCPLVLFSTEGGMDIEEVAATRPDALHRHRVDPEAGFDKAAAHALLAGLDL 161

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              + +I G  +   LY      D  L+EINPL I+ +GR   LD K++ DD+A +R  D
Sbjct: 162 AGAEDQIAG--ILAALYATSARVDAELIEINPLAILADGRAVALDCKLTLDDSAAFRQAD 219

Query: 239 IQELRDVSEEDSREIEAK--QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +    + +EE   ++E +   + L +I LDG++G + NGAGL+M TMD+I   GG PANF
Sbjct: 220 LTG--EAAEEPMTDLEREGAANGLKFIQLDGDVGVLANGAGLSMTTMDVISHCGGRPANF 277

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           L++GG A   K  AA K++ S+  VK +++N  G   R DV+ KG+++A K +  +IP+ 
Sbjct: 278 LEIGGEA-YTKSEAALKLVLSNPGVKSLVVNFCGAFARTDVMAKGVVTAWKRLAPDIPVF 336

Query: 357 MRLEGANVDIGNRLI 371
             + G   D   RL+
Sbjct: 337 FSIHGTGEDEAVRLV 351


>gi|323701754|ref|ZP_08113425.1| succinyl-CoA synthetase, beta subunit [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533290|gb|EGB23158.1| succinyl-CoA synthetase, beta subunit [Desulfotomaculum nigrificans
           DSM 574]
          Length = 379

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 200/398 (50%), Gaps = 30/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M ++EY  K + RK  +PV +G    +    AE A      P  VVKSQ+ +GGR K   
Sbjct: 1   MKLYEYMGKDIFRKEGIPVPRGQAFFNPTGVAEYAAGL---PAVVVKSQVLSGGRSKA-- 55

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG++  ++     +    +LG+ +           V  V VE+   I +E Y
Sbjct: 56  --------GGIKFPATATDAAAAAEALLGTVI-------KDLSVQAVLVEEKLTIDKEYY 100

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +++ VD        IAS  GG+DIEEV +    ++ K+ +D   G+       +   + L
Sbjct: 101 VAITVDGARRKPLVIASAYGGVDIEEVPE---HQLVKMHVDVHSGIQPYMGREVARRMGL 157

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    D+   +Y  F   D  L+EINPL++  + +L   D+K + DD A +R  D 
Sbjct: 158 PAGEAKQFADILVKMYTIFRKYDAELVEINPLVVSGD-KLVAADAKFNIDDEASFRWPDW 216

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L  V E    E+ A +  +S++ LDG+I  M NGAG+ MAT+D++  +GG+P NF+D 
Sbjct: 217 --LPRVEERSQLELRATELGISFVELDGDIAVMANGAGITMATLDMLNHFGGSPRNFMDA 274

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  +  A A +I+ S ++ + ILINIFGGI RCD + +      +   I +P+V+RL
Sbjct: 275 GGGASTEATAKALEILLS-TNPRAILINIFGGITRCDDVARAFAHVRETTGIPVPIVIRL 333

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N   G  ++ + G++     ++D+A  K+V    G
Sbjct: 334 VGTNEQAGIEVLQQQGMSAYR--NIDEAVVKVVELAAG 369


>gi|167042621|gb|ABZ07343.1| putative CoA-ligase [uncultured marine crenarchaeote
           HF4000_ANIW133K13]
          Length = 370

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 200/392 (51%), Gaps = 45/392 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L ++Y++ V   +  +++       K +  P +V+K+Q+  GGRGK    
Sbjct: 1   MRLLEYQAKELFKEYDIKVPDSISSNNIEKGRKDAKKIGFP-FVIKAQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         +ILG T+        G +   + +E  ++  +E+YL
Sbjct: 57  -------GGIQKCHNEDEFELKYPQILGMTI-------KGEKTRAILLEKMSEYEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAK---------DYPQKIFKLLIDPLIGVTSEDVA 171
           SL +DR+      I+S +GG++IE V           D  +KI +  I   IG+  + V 
Sbjct: 103 SLFLDRSKRCYTVISSAEGGVEIESVKNQVIREVGLGDVSKKIAEE-IAVKIGLDEKSVT 161

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              D+L+               L K   +K+  L EINPL+I+ +G +  LD KI  DDN
Sbjct: 162 YFVDILQ--------------KLSKLTVEKEAELTEINPLVILNDGSMVALDGKIMTDDN 207

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           + +RH ++ + R   E+   E +A++   S + LDGNI  + NGAGL M+T D++   GG
Sbjct: 208 SNFRHGELAKYR---EQTKLEEKAEKSGFSLVELDGNIAVVGNGAGLVMSTFDMLADNGG 264

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
            PA FLDVGGGA +  V  A  +I+    VK IL+N+FGGI++  ++    + A     I
Sbjct: 265 KPACFLDVGGGATEKSVYEALTLISKMKKVKAILVNLFGGIVKTTIVASAFIKAYDNKLI 324

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           ++P+  RL GA  D    ++ ++   + T+++
Sbjct: 325 DLPVYARLMGAESDKSKEMLKDTKTKMFTSVE 356


>gi|269986365|gb|EEZ92662.1| Succinate--CoA ligase (ADP-forming) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 366

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 201/391 (51%), Gaps = 31/391 (7%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++ K + + Y + V  G +I S   A+      P    VVK+Q+  G RG          
Sbjct: 7   HEGKKIFKSYGINVPSGYIIHSFKEAKK-----PEKESVVKAQVPTGHRG---------- 51

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GGV      + +   I EI             G +     VE+     +E+Y+ L +D
Sbjct: 52  INGGVVKVKDKEEISKAIGEISSIDF-------NGFKAESFLVEEMVPHSKEIYVGLTLD 104

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           R+  M   I S  GG+DIE V  +   +I K  +D L+G+         + + L    R 
Sbjct: 105 RSKKMPILIISPSGGVDIEHVPAN---QIKKFYLDILLGMQGYVKREAFNFIGLSENYRE 161

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDV 245
              +L  +L+K F  +D  L+E+NPL +  +G L  LDSK++ +D+AL+RH + Q  ++ 
Sbjct: 162 VFYNLMESLWKVFTGEDCELVEVNPLAVTSSG-LVALDSKVTIEDDALFRHKNYQ--KEY 218

Query: 246 SEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ 305
           +  D  E EAK+  ++++ L G+IG + NGAGL +AT+D IKL GG   +FLD+GG  D 
Sbjct: 219 TSSDPLEAEAKRKGIAFVRLGGDIGLIANGAGLTLATIDQIKLAGGNAGDFLDLGGTDDP 278

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
           +KVA A  ++   +  K + INIFGG+ + D + +GI+ A+K    NI +V+RL G N  
Sbjct: 279 EKVAEAINLVKK-AKPKALFINIFGGVTKADTVAEGIVKAIKGSDTNIRIVVRLMGVNSQ 337

Query: 366 IGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G +L+  +G+   T  D+ +A +K V   K
Sbjct: 338 RGIQLLKSNGIEAFT--DISEAVKKAVEVSK 366


>gi|167957426|ref|ZP_02544500.1| succinyl-CoA synthetase subunit beta [candidate division TM7
           single-cell isolate TM7c]
          Length = 351

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 203/390 (52%), Gaps = 53/390 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK LL    +P+ +G V      A + ++ +  P+ V+KSQ+  GGRGK    
Sbjct: 1   MRLLEYEAKNLLSACGMPIPRGKVF-----AVNELQAIAAPI-VLKSQVPIGGRGK---- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++        SD+  +       K  G   S++     E+  DI RE Y 
Sbjct: 51  ------LGGVQIVRHQ----SDLESVARKMFNLKIKGFLPSKL---LAEEILDISREFYF 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEE------VAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           SL ++R +  +  +A T GG++IE         +D   + F+ L D L      D+A   
Sbjct: 98  SLNINRQTAGIELLAHTSGGVEIESQDTADFFRRDIVNEKFEALADELADYL--DIADKT 155

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            +L+          D+  N Y+ F D D  LLEINPLI+ K+ +L   D+KI+ DD A +
Sbjct: 156 FLLQ----------DIIENAYRCFIDNDCLLLEINPLILTKDSKLIAGDAKITVDDAAAF 205

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           RHLD +      E++S E     HN   +  DG +  + NGAGLAM T+D +   G  PA
Sbjct: 206 RHLDWR-----FEDNSTE-----HNFIILNRDGAVATIANGAGLAMTTVDAVTASGLKPA 255

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLD+GG A  DKV   F+ IT+  ++K I+INIFGGI+RCD + + I+ A +++  N+P
Sbjct: 256 NFLDIGGTATSDKVLDCFRQITTLDNIKVIIINIFGGIVRCDDIARAIIDAQRQIP-NLP 314

Query: 355 -LVMRLEGANVDIGNRLIAESGLNVITAID 383
            L +RL G       +L+A+  L +  +++
Sbjct: 315 KLAIRLSGNRESEARQLLAQYNLPLFDSLE 344


>gi|126335146|ref|XP_001367268.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 263

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/206 (46%), Positives = 142/206 (68%), Gaps = 3/206 (1%)

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS 246
             D    LY+ F   D +++EINP++   +G +  +D+KI+FD N+LY    I +L+  +
Sbjct: 39  AADNMVKLYELFLKYDATMVEINPMLEDVDGGVLCMDAKINFDSNSLYCQKKIFDLQGWT 98

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           +ED R+ +A +  ++YI L+G IGC+VNGA   +ATMDIIKL+GG PANFLDVG GA  +
Sbjct: 99  QEDERDNDAAKEGINYIGLNGKIGCLVNGA---VATMDIIKLHGGMPANFLDVGDGASVN 155

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
           ++  +FK+ITSD  V+ IL+NIFG IMR  V+ +GI+ AVK++ I IP+V+ L+G  VD 
Sbjct: 156 QMTHSFKLITSDKKVQAILVNIFGEIMRYGVIAQGIVMAVKDLDIKIPIVVWLQGTRVDD 215

Query: 367 GNRLIAESGLNVITAIDLDDAAQKIV 392
              LIA+ GL ++   DLD+AA+ +V
Sbjct: 216 AKALIADRGLKILAYNDLDEAAKMVV 241


>gi|256829615|ref|YP_003158343.1| succinyl-CoA synthetase subunit alpha [Desulfomicrobium baculatum
           DSM 4028]
 gi|256578791|gb|ACU89927.1| succinyl-CoA synthetase, alpha subunit [Desulfomicrobium baculatum
           DSM 4028]
          Length = 689

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 194/383 (50%), Gaps = 36/383 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +K L  +  +PV  G ++        +   LP   +V+KSQ+ +GGRGK    
Sbjct: 1   MKLNEHNSKQLFHEAGIPVPLGALLGPGDEPAPSF-ALP---WVLKSQVLSGGRGKA--- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  +L+ V +++ +I   T+        G +V  V +E  A   RE+YL
Sbjct: 54  -------GGIRMADTLEQVRTELAQIFSLTI-------KGEKVRLVRIEPKAAYTREIYL 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR S      A   GGMDIE      PQ +      P  G+    + ++   L L 
Sbjct: 100 SITLDRQSRSFCITAGRFGGMDIESCD---PQTLLIEHAAPDTGLAPFQIRNIFFHLRLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD------DNALY 234
            +       L  NL+       + L EINPL++ ++G+L  LD K+  D      D +L 
Sbjct: 157 KELMKAFSSLLSNLFDCCLRHRLLLAEINPLVLTEDGQLLALDGKVEIDGHRVGIDPSLN 216

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R  +   L   S+E++R  EA    LSY  LDG +G MVNGAGLAMA+MDI+   G   A
Sbjct: 217 RFFEAAHL---SDEENRSREAA---LSYHRLDGYVGLMVNGAGLAMASMDILNYSGLEAA 270

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLD+GGGAD   +  A  I+  DS V+ + INIFGGI+ C  + + +L A+   +   P
Sbjct: 271 NFLDLGGGADSTAMRTALDILFDDSRVEMVFINIFGGILSCHKVAESMLEALDGQEPRKP 330

Query: 355 LVMRLEGANVDIGNRLIAESGLN 377
           +V+R  G     G  L+ ++ LN
Sbjct: 331 IVVRFAGNGSADGLSLLRKAALN 353


>gi|167628505|ref|YP_001679004.1| succinyl-coa synthase, beta subunit [Heliobacterium modesticaldum
           Ice1]
 gi|167591245|gb|ABZ82993.1| succinyl-coa synthase, beta subunit [Heliobacterium modesticaldum
           Ice1]
          Length = 375

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 211/400 (52%), Gaps = 34/400 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M   E+  K +  ++ +PV +G +V++   AA++A +   G   V+KSQ+ +G RGK   
Sbjct: 1   MKCFEFMGKEIFARFGIPVPRGRMVLTPEDAAQAAAEI--GKPVVIKSQVLSGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG++   + +       E+L  T+        G  V  V VE+   I  ELY
Sbjct: 57  --------GGIKFADTPEEAAQAAAEVLSMTV-------QGLPVRRVLVEEKLKIDAELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +++ +D  +     IAS +GGMDIEE  +     I K  +D  +G+ +     +   + L
Sbjct: 102 VAITIDGAAKAPVVIASAKGGMDIEEQDE---ADIVKTHLDVFLGLPAFLARDVARKIGL 158

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G    +  D+   +Y     KD  L+EINPL++  +  L   D+K++ DD+ALYR  DI
Sbjct: 159 RGNLAKEFSDILSKMYCILNHKDAELVEINPLVVSGD-HLIAADAKLTIDDSALYRQKDI 217

Query: 240 QELRDVSEEDSREIE--AKQHNL-SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             +    +ED  E+E  AK   + S++ L G+I  M NGAG+ M T+D+I+L+GG PANF
Sbjct: 218 PFV----DEDMTEVEKMAKAAGVGSFVELGGDIAIMANGAGITMGTLDMIQLFGGRPANF 273

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           +D GGG   +  A A  I+ + +  K I INIFGGI RCD +   +    +++ I +P+V
Sbjct: 274 MDAGGGTGVEGTAKAISILLAQNP-KVIFINIFGGITRCDDVANALAQVKRDMGIPVPVV 332

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +R+ G N + G R++ E G++     D+  AAQ  V   K
Sbjct: 333 VRMVGTNEEAGVRILKEVGIDAYR--DMKTAAQMAVALAK 370


>gi|37288605|gb|AAQ90527.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 546]
          Length = 167

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/171 (57%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNIHIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+    G++  LD+K++FD NALYRH DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288513|gb|AAQ90481.1| succinyl-CoA synthetase beta subunit [Bacillus cereus ATCC 14579]
 gi|37288519|gb|AAQ90484.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|37288565|gb|AAQ90507.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 889]
 gi|37288575|gb|AAQ90512.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1129]
 gi|37288577|gb|AAQ90513.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1132]
 gi|37288637|gb|AAQ90543.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 716]
 gi|37288639|gb|AAQ90544.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 718]
 gi|37288641|gb|AAQ90545.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 721]
 gi|37288643|gb|AAQ90546.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 726]
 gi|37288649|gb|AAQ90549.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 811]
 gi|37288657|gb|AAQ90553.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1293]
 gi|37288659|gb|AAQ90554.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1294]
 gi|57233305|gb|AAW48239.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
          Length = 167

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/171 (57%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+    G++  LD+K++FD NALYRH DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288581|gb|AAQ90515.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1247]
          Length = 167

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EEDS+E+EA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEVEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|167945187|ref|ZP_02532261.1| succinyl-CoA synthetase beta chain [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589068|gb|ABG77043.1| succinyl-CoA ligase beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 136

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 110/136 (80%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           LY+ +  KD+SL+EINPLI+  +G+L  LD+KI+ D NALYRH D+  LRD S+ED +E 
Sbjct: 1   LYRLYMAKDVSLIEINPLIVTGDGQLMALDAKINIDSNALYRHQDLVALRDPSQEDEKEA 60

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
            A QH+L+YI LDG+IGCMVNGAGLAMATMD++KL+GG PANFLDVGGGA  ++V  AFK
Sbjct: 61  AAAQHDLNYITLDGSIGCMVNGAGLAMATMDMVKLHGGDPANFLDVGGGATAERVTEAFK 120

Query: 314 IITSDSSVKGILINIF 329
           +I SD+ VK +L+NIF
Sbjct: 121 LILSDAKVKTVLVNIF 136


>gi|161528631|ref|YP_001582457.1| succinate--CoA ligase [Nitrosopumilus maritimus SCM1]
 gi|160339932|gb|ABX13019.1| Succinate--CoA ligase (ADP-forming) [Nitrosopumilus maritimus SCM1]
          Length = 368

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 203/385 (52%), Gaps = 31/385 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK-GRF 59
           M + E+QAK L R+Y + +   +  +++       K L  P +V+K Q+  GGRGK G  
Sbjct: 1   MQLLEFQAKELFREYGINLLDSISSTNIEEGRKHAKELGYP-FVIKIQVPVGGRGKAGGI 59

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           ++   D +  ++    +   I                   G +   + +E  ADI +ELY
Sbjct: 60  QKCQNDDEFEIKYPQVMDLTIK------------------GEKARAILLEKMADIKKELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLE 178
           LS+ ++R+      IAS +GG++IE V     ++I        +G  S+D+A  +   + 
Sbjct: 102 LSIFLNRSKRCYTIIASDEGGVEIESVKNQIIKEIG-------LGEVSDDLAQEVAKEMG 154

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+G+      D    L K   +K+  L+EINPL IM++  +  LD K   DDN+ +RH +
Sbjct: 155 LEGKHAEGVVDTLKKLSKLTIEKEAELVEINPLAIMQDDSITALDGKFVTDDNSNFRHPE 214

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +++ ++ SE    E +A++   S + LDG+I  + NGAGL M+T+D++   GG PA FLD
Sbjct: 215 LEKYQEKSE---IEEQAEKSGFSLVELDGDIAVVGNGAGLVMSTLDMLSDNGGKPACFLD 271

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + V  A  +I+    VKGIL+N++GGI++  V+ +  L A ++  I++P+  R
Sbjct: 272 VGGGATTESVYEALTLISKLDRVKGILVNLYGGIVKTTVVAEAFLKAYEDNVIDLPVFSR 331

Query: 359 LEGANVDIGNRLIAESGLNVITAID 383
           L+G   +    ++  S   + + ++
Sbjct: 332 LKGTESEKATEMLQGSRTKIFSTVE 356


>gi|37288587|gb|AAQ90518.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1272]
 gi|37288589|gb|AAQ90519.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1273]
          Length = 167

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/171 (57%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYSAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|156073288|gb|ABU46002.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073292|gb|ABU46004.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
          Length = 167

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDENV 167


>gi|37288507|gb|AAQ90478.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1127]
 gi|37288511|gb|AAQ90480.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1135]
 gi|37288515|gb|AAQ90482.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|37288527|gb|AAQ90488.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 728]
 gi|37288529|gb|AAQ90489.1| succinyl-CoA synthetase beta subunit [Bacillus cereus ATCC 10987]
 gi|37288531|gb|AAQ90490.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 810]
 gi|37288533|gb|AAQ90491.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 812]
 gi|37288535|gb|AAQ90492.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 813]
 gi|37288537|gb|AAQ90493.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 816]
 gi|37288539|gb|AAQ90494.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 817]
 gi|37288541|gb|AAQ90495.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 818]
 gi|37288543|gb|AAQ90496.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 819]
 gi|37288545|gb|AAQ90497.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 820]
 gi|37288547|gb|AAQ90498.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 823]
 gi|37288549|gb|AAQ90499.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 824]
 gi|37288551|gb|AAQ90500.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 825]
 gi|37288553|gb|AAQ90501.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 826]
 gi|37288555|gb|AAQ90502.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 827]
 gi|37288557|gb|AAQ90503.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 828]
 gi|37288559|gb|AAQ90504.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 829]
 gi|37288561|gb|AAQ90505.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 831]
 gi|37288563|gb|AAQ90506.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|37288567|gb|AAQ90508.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288569|gb|AAQ90509.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288591|gb|AAQ90520.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|37288593|gb|AAQ90521.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 267]
 gi|37288647|gb|AAQ90548.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288651|gb|AAQ90550.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 830]
 gi|37288653|gb|AAQ90551.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288655|gb|AAQ90552.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|57233289|gb|AAW48231.1| succinyl-CoA synthetase beta subunit [Bacillus cereus NC7401]
 gi|57233291|gb|AAW48232.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233293|gb|AAW48233.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233295|gb|AAW48234.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233297|gb|AAW48235.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233299|gb|AAW48236.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233301|gb|AAW48237.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233303|gb|AAW48238.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073252|gb|ABU45984.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|156073254|gb|ABU45985.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|156073256|gb|ABU45986.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|156073258|gb|ABU45987.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073260|gb|ABU45988.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073262|gb|ABU45989.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073264|gb|ABU45990.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073266|gb|ABU45991.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073268|gb|ABU45992.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073270|gb|ABU45993.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073272|gb|ABU45994.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073274|gb|ABU45995.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073276|gb|ABU45996.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073278|gb|ABU45997.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073280|gb|ABU45998.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073282|gb|ABU45999.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073284|gb|ABU46000.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073286|gb|ABU46001.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073290|gb|ABU46003.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073294|gb|ABU46005.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073296|gb|ABU46006.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073298|gb|ABU46007.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
          Length = 167

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|303327248|ref|ZP_07357690.1| succinyl-CoA synthase, beta subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863236|gb|EFL86168.1| succinyl-CoA synthase, beta subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 373

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 195/397 (49%), Gaps = 26/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EYQAK   R+  +   +GV++ SV   ++A      P  V+KSQ+  GGRGK    
Sbjct: 1   MNLFEYQAKEAFRECGITTPRGVLVRSVEELDAAFAETGFPC-VLKSQVLRGGRGKAGLI 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +  D++ G R    L +   ++R +L                    VE   DI RE+YL
Sbjct: 60  RMVGDAETGKREAGELFASAHNVRMLL--------------------VEQAVDIAREIYL 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  +G    +   +GG+DIE +A   P+KI ++ +D   G+    V +L   + L 
Sbjct: 100 SITVDPVTGTALLMGCAEGGVDIESLAATQPEKIVRVHVDMAEGLGGYHVNNLIYGMGLS 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G     LYK F   D  L EINPL I ++G+    D K+  DDN+L R     
Sbjct: 160 GEEAKQVGAAARGLYKVFRACDAQLAEINPLFITRDGQAVAGDGKLIIDDNSLPRQPRYP 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA +  + Y+  DG+I  M  G+GL     D+I   GG+ A ++D  
Sbjct: 220 LSRDYFDSDV-EFEAAREGIPYLRFDGDIALMCAGSGLTTTVFDLIHDEGGSVATYVDF- 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  +   A ++     S K IL+  FG I R DV+ +G++ A+K++   +P+V+R+ 
Sbjct: 278 GGANYTRAVRAMELCLETPS-KVILVVTFGTIARADVMAEGVVEAIKKLHPKVPVVLRIR 336

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N       + ++GL  +   D ++A  K V    G
Sbjct: 337 GTNEAEAFETLKQAGLANL--YDTEEAVCKAVDLAAG 371


>gi|37288571|gb|AAQ90510.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
          Length = 167

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+    G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|290559062|gb|EFD92436.1| Succinate--CoA ligase (ADP-forming) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 366

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 203/389 (52%), Gaps = 31/389 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++ K + + Y + +  G +I S    +      P    VVK+Q+ +G RG         
Sbjct: 6   EHEGKKIFKSYGISIPSGYIIHSFKEVKK-----PEKECVVKAQVPSGHRG--------- 51

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV         + +  EIL +          G +     VE+     +E+Y+ L +
Sbjct: 52  -INGGV-------VKVKEKEEILKAINKISSINFNGFKATSFLVEEMVPHTKEVYVGLTL 103

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR+  M   I S  GG+DIE V  +   +I K  +D L+G+ +       + + L    R
Sbjct: 104 DRSRKMPVLILSPSGGVDIEHVPAN---QIKKFYLDILLGMQNYIKREAFNFIGLSENYR 160

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
                L   L+  F  +D  L+EINPL +  +G L  LDSK++ +D+AL+RH + Q  ++
Sbjct: 161 EIFYTLMERLWNVFTGEDCELVEINPLAVTSSG-LVALDSKVTIEDDALFRHKNYQ--KE 217

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
            +  D  E EAK+ +++++ L G+IG + NGAGL +AT+D IKL GG+  +FLD+GG  D
Sbjct: 218 YTSLDPLEAEAKRKDIAFVRLGGDIGLIANGAGLTLATIDQIKLAGGSAGDFLDLGGTDD 277

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
            +KVA A  ++   +  K + INIFGG+ + D + +GI+ A+K+   N  +++RL G N 
Sbjct: 278 PEKVAEAINLVKK-AKPKVVFINIFGGVTKADTVAEGIIKAIKDSDTNPKIIVRLMGVNN 336

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIVH 393
             G +L+  +G++  T  D+ +A +K V 
Sbjct: 337 QRGIQLLKANGIDAFT--DISEAVKKAVE 363


>gi|37288573|gb|AAQ90511.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1123]
          Length = 167

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA ++ L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYGLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288517|gb|AAQ90483.1| succinyl-CoA synthetase beta subunit [Bacillus cereus ATCC 4342]
          Length = 167

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDRNV 167


>gi|301057634|ref|ZP_07198712.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
 gi|300448248|gb|EFK11935.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
          Length = 378

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 205/396 (51%), Gaps = 25/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+   +     +PV +  V  S+  A      +  P+ ++K+Q+  GGRG     
Sbjct: 1   MRLHEYEGADIFESMKIPVPRRGVAESIEDAAKIAGEIGYPV-ILKAQVLVGGRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +++     E+ G  +        G +V  + V + ADI +ELY+
Sbjct: 57  -------GGVKTANTPEALEEMAGELFGKEI-------KGLKVRKIMVSEKADIEQELYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D  SG    +AST+GG++IE VA   P KI    +DP  G+      +L   L L 
Sbjct: 103 GITIDGYSGRPVVVASTEGGVNIEAVADQSPDKIASFHVDPKFGLYPYHARNLFGKLGLT 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A I   D+   LYK F   +   +EINPL ++ NG +  +DS +  D++AL R   IQ
Sbjct: 163 QRALISCADVTVKLYKIFTSLEALQVEINPLAVLANGGVIAVDSVLEIDNSALSR---IQ 219

Query: 241 E-LRDVSE--EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
             L D  E  E+S E + K+  ++Y+ LDG+I  + +GAGL MA+MDII      PANFL
Sbjct: 220 HPLPDYWERIENSLERKGKEIGVTYVDLDGDIALISSGAGLGMASMDIIG-KTLKPANFL 278

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           + GGG   D +     ++T+   +K + INI+GGI       KG++  +KE  + IP+V 
Sbjct: 279 ETGGGITADLLYKCMDLVTTKKRIKAVFINIYGGINPIHEGAKGVVRFIKENNLQIPIVA 338

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +  G + +    ++   G++V+T    + A +K+V 
Sbjct: 339 KALGNHQEETWEILRSGGVHVVTDAATEAAVEKLVE 374


>gi|37288509|gb|AAQ90479.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1131]
          Length = 167

 Score =  182 bits (462), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYRH DI ELRD+ EED +EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDVKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|15921204|ref|NP_376873.1| succinyl-CoA synthetase subunit beta [Sulfolobus tokodaii str. 7]
 gi|15621989|dbj|BAB65982.1| 272aa long hypothetical succinyl-CoA synthetase beta subunit
           [Sulfolobus tokodaii str. 7]
          Length = 272

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/278 (41%), Positives = 163/278 (58%), Gaps = 22/278 (7%)

Query: 103 VNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
           VN   VE+     +E+YLS L+DR       +AS +GG+DIE        KIF + I+  
Sbjct: 5   VNKFLVEEFIPHEKEIYLSALIDRDVAEPIIVASPEGGIDIESSKN---VKIFHIPIER- 60

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
            GV S DV  +   L ++G   I  G     LYK   + D  L EINPL +  +GRL  L
Sbjct: 61  -GVRSYDVIKIEKYLNVKGLEPIIKG-----LYKLVTEYDAELAEINPLAVTVDGRLYAL 114

Query: 223 DSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMAT 282
           DSK+  +DNAL+RH D+  L  +    S++        +Y+ LDG+IG + NGAGL MAT
Sbjct: 115 DSKVILEDNALFRHQDL--LEKIGRSPSKD--------AYVELDGDIGIIGNGAGLTMAT 164

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           MD++KL GG+PA+F DVGGGAD++KV  A   I S+  VK I+INI+GGI +CD +  GI
Sbjct: 165 MDMVKLMGGSPADFYDVGGGADREKVKEAVLKIGSNPKVKKIIINIYGGITKCDEVALGI 224

Query: 343 LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           + A   +K   P+ +RL G N + G +++ ++G+   T
Sbjct: 225 VDAYSLIK--KPIYVRLVGTNEEQGRKILQDNGIKYYT 260


>gi|37288585|gb|AAQ90517.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1271]
 gi|37288599|gb|AAQ90524.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 519]
 gi|37288601|gb|AAQ90525.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 536]
 gi|37288603|gb|AAQ90526.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 542]
 gi|37288609|gb|AAQ90529.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 553]
 gi|37288611|gb|AAQ90530.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 572]
 gi|37288613|gb|AAQ90531.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 607]
 gi|37288645|gb|AAQ90547.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 727]
          Length = 167

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 120/171 (70%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRNKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288521|gb|AAQ90485.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 407]
 gi|37288523|gb|AAQ90486.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 632]
 gi|37288525|gb|AAQ90487.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 663]
 gi|37288579|gb|AAQ90514.1| succinyl-CoA synthetase beta subunit [Bacillus weihenstephanensis]
 gi|37288595|gb|AAQ90522.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 403]
 gi|37288597|gb|AAQ90523.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 408]
 gi|37288615|gb|AAQ90532.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 614]
 gi|37288617|gb|AAQ90533.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 627]
 gi|37288619|gb|AAQ90534.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 641]
 gi|37288621|gb|AAQ90535.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 645]
 gi|37288623|gb|AAQ90536.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 650]
 gi|37288625|gb|AAQ90537.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 664]
 gi|37288627|gb|AAQ90538.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 675]
 gi|37288629|gb|AAQ90539.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 676]
 gi|37288631|gb|AAQ90540.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 678]
 gi|37288633|gb|AAQ90541.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 681]
          Length = 167

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYSAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRNKDILELRDLEEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288607|gb|AAQ90528.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 547]
          Length = 167

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLRGFQARRIAFNINIPKELVGQAV----KFMMGLYSAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRNKDILELRDLEEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288583|gb|AAQ90516.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1270]
          Length = 167

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQ           LY+AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQTV----KFMMGLYRAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRNKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|167043822|gb|ABZ08512.1| putative CoA-ligase [uncultured marine crenarchaeote
           HF4000_APKG3D24]
          Length = 368

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L ++Y + V   +V   V +     + +  P +V+K+Q+  GGRGK    
Sbjct: 1   MRLLEYQAKELFKEYGIRVPTSIVSKDVESGRKDAEKIGYP-FVIKAQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         ++L  T+        G +   V +E  ++  +E+YL
Sbjct: 57  -------GGIQKCHNEDEFELKYPQVLNMTI-------KGEKTRAVLLEKMSEYEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL ++R+      I+ST+GG++IE V     ++I       L  VT +    +   + L 
Sbjct: 103 SLFLNRSKRCYTIISSTEGGVEIESVKNQVIREI------GLGDVTKKVAEEVAKEIGLD 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   L K   +K+  L EINPL+I+K+G +  LD KI  DDN+ +RH   +
Sbjct: 157 ENSVTHFVDILQKLSKLTIEKEAELTEINPLVILKDGSMMALDGKIMTDDNSNFRH---K 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL    E+   E +A++   S + LDGNI  + NGAGL M+T+D++   GG  A FLDVG
Sbjct: 214 ELTKYQEKTELEKKAEESGFSLVELDGNIAVIGNGAGLVMSTLDMLTDNGGKAACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V  A  +I+   +VK +L+N++GGI++  ++    L A  +  I +P+  RL 
Sbjct: 274 GTATTESVYEALTLISRMKNVKAVLVNLYGGIVKTTIVASAFLQAYDDKIIILPVFARLM 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           GA  +    ++ +S   +  +I  ++A  K+V  V
Sbjct: 334 GAESEKSKEMLKDSETQLSPSI--EEAINKVVMEV 366


>gi|840845|emb|CAA58870.1| succinyl-coA synthetase beta-subunit from sucC [Pseudomonas
           aeruginosa PAO1]
          Length = 150

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/147 (61%), Positives = 122/147 (82%)

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVGGGA +++V  
Sbjct: 3   REAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE 62

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLEG N ++G ++
Sbjct: 63  AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKV 122

Query: 371 IAESGLNVITAIDLDDAAQKIVHAVKG 397
           +AESGLN+I A  L DAAQ++V A +G
Sbjct: 123 LAESGLNIIAATSLTDAAQQVVKAAEG 149


>gi|37288635|gb|AAQ90542.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 685]
          Length = 167

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/171 (56%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 155 FKLLIDPLIGVTSEDVASLCDML----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           FK  IDP +G+       +   +    EL GQA          LY AF +KD S+ EINP
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAV----KFMMGLYSAFIEKDCSIAEINP 56

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
           L+   +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIG
Sbjct: 57  LVTTGDGKVMALDAKLNFDSNALYRNKDILELRDLEEEDSKEIEASKYDLNYIPLDGNIG 116

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           CMVNGAGLAMATMDIIK Y G PANFLDVGGGA  +KV  A+KII SD +V
Sbjct: 117 CMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAYKIILSDKNV 167


>gi|312116113|ref|YP_004013709.1| succinate--CoA ligase (ADP-forming) [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221242|gb|ADP72610.1| Succinate--CoA ligase (ADP-forming) [Rhodomicrobium vannielii ATCC
           17100]
          Length = 371

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 182/363 (50%), Gaps = 28/363 (7%)

Query: 1   MNIHEYQAKAL-LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ EY AK + L +  +PV  G++  +   A  A   L     V+K+Q+  G RGK   
Sbjct: 1   MNLLEYSAKHMVLSRAGIPVPNGILCLTPEDAAGAYDKLGA--CVIKAQVSTGKRGK--- 55

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGVR+  S          IL  T+        G  V  V  E+ ADI RE Y
Sbjct: 56  -------SGGVRLAFSADEAKEAAAAILALTI-------NGFPVAAVLAEEKADIEREYY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L D  +     + S +GGMDIEE+A+  P+ I +  +D   G +  D A L +    
Sbjct: 102 AAILPDPVTRSPMVLFSEEGGMDIEELAERKPEAIRRFYVDVSAGFSEADAAELAEGPYA 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A I        LY+AF   D  LLEINPL ++K+  +  LD K   D  A +R  ++
Sbjct: 162 AGIAPI-----LVRLYEAFVANDGELLEINPLAVLKDKSIVALDCKFILDPAAAFRQPEL 216

Query: 240 QELRDVSEEDSR-EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
                V E  +R E EA+   L +I L+GN+  + NGAGL M TMD +  +GG PANF +
Sbjct: 217 AATA-VPERRTRLEKEAEDAGLKFIELEGNVAILANGAGLTMTTMDAVSHFGGRPANFQE 275

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GG A   K   A +I+ S+  VK +++N  G   R DV+ +G+++A +++   IP+   
Sbjct: 276 IGGEA-YTKAETALRIVLSNPGVKSLVVNFCGAFARTDVMAEGVVAAWEKLTPEIPVFFS 334

Query: 359 LEG 361
           + G
Sbjct: 335 IHG 337


>gi|225569266|ref|ZP_03778291.1| hypothetical protein CLOHYLEM_05348 [Clostridium hylemonae DSM
           15053]
 gi|225162065|gb|EEG74684.1| hypothetical protein CLOHYLEM_05348 [Clostridium hylemonae DSM
           15053]
          Length = 383

 Score =  179 bits (453), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 201/395 (50%), Gaps = 27/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+  E + KA L ++ +PV + ++++     +     +  P  V+K QI AG RGK    
Sbjct: 1   MDYLEIEGKAQLERFGIPVNESILLTDDQVPDG----IEYPC-VLKGQILAGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VRV  S K  ++++++I+    I   T      + C ++     I  E YL
Sbjct: 53  -------GAVRVVKS-KEELTEVKKIIEGISINGHT--MEGVIACNFLP----ISEEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D  +  V  + +  GGMDIEE+A   P+K+ +   D   G  +E       + +L 
Sbjct: 99  GMTLDVKNRAVIMLFTPFGGMDIEELAAAAPEKLLRF--DCTEGFDAEAFRMAAAVFDLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L +A    D + +EINPL ++++GRL  +D+K+  DDN+LYR  D  
Sbjct: 157 AARMEQVADIARKLARACFALDATTIEINPLAVLEDGRLIAIDAKLVIDDNSLYRQGDYI 216

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            L R   E+  +E EA+ H+L+Y+ LD  G+IG M  GAG+ MATMD I+ YGG   NFL
Sbjct: 217 ILPRTEQEKTPQEAEAEAHDLTYVELDAKGDIGTMAGGAGIGMATMDTIRHYGGRVNNFL 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG   +K   A  I+  + S   + +N+FGGI  C  + +GI  A  E+ I  P+V+
Sbjct: 277 DLGGGVTAEKTYQAMCILLKNKSTDYVFVNVFGGINNCADMAEGIARAYTELGIRKPVVV 336

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +  G N + G  +  + G         D+A Q ++
Sbjct: 337 KSRGFNQEQGWSIYEKLGFPQTKYGTTDEAVQTLL 371


>gi|119719430|ref|YP_919925.1| Fis family transcriptional regulator [Thermofilum pendens Hrk 5]
 gi|119524550|gb|ABL77922.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermofilum
           pendens Hrk 5]
          Length = 372

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 200/384 (52%), Gaps = 27/384 (7%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAES--AIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +E++ K +  K+ VPV K  +++     +S   IK L  PL +VK+Q+   GRGK    +
Sbjct: 4   YEFEVKDIFEKFQVPVEKSCLLTHEALKDSLGCIKGLRTPL-IVKAQVRGWGRGKAGLVK 62

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
              + +  ++V          +RE              G ++  V V +   ILRE+YLS
Sbjct: 63  SAENPEEALKVAQEFF-----LREF------------NGEKIRYVLVSERKRILREMYLS 105

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            +V         +AS  GG+D+EE++K  P  + K+ IDP  G+    V ++   L +  
Sbjct: 106 FMVSSNPPGFLLLASKHGGVDVEELSKT-PGGLLKIFIDPFEGLRDYMVRTVAGYLGVP- 163

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH-LDIQ 240
           Q  I+   +  +L++ F + + +LLE+NPL + ++G L  LD K   DD+A  +  L   
Sbjct: 164 QEHIE--KILRSLWQIFREYNFTLLEVNPLALTEDGVL-ALDRKGVIDDDASRKSSLTGI 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             R  SE D   + A Q   S + LDG+   + NGAGL MAT+D +   G  P  FLD+G
Sbjct: 221 FARYFSELDELSLSAFQKGFSVVKLDGDTAVVGNGAGLTMATLDAVLEAGARPGLFLDLG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRL 359
           GGAD ++V  A  ++    ++  IL+NI GGI RCD + +G++ A+   K  ++ + +RL
Sbjct: 281 GGADAERVREALLLVLKQQNISKILLNILGGITRCDEVARGVVQALSSAKPSSVKVAVRL 340

Query: 360 EGANVDIGNRLIAESGLNVITAID 383
            G   D G R++ E+GL+   +++
Sbjct: 341 SGFMEDEGRRILREAGLSAFDSLE 364


>gi|269986562|gb|EEZ92845.1| Succinate--CoA ligase (ADP-forming) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 371

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 210/396 (53%), Gaps = 31/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E++ K L + Y + +  G +I S        +       V+K+Q+  G RG     
Sbjct: 2   VDLLEFEGKKLFKSYGIEIPSGKLIHSTSDLNDFKEE-----QVIKAQVPTGHRG----- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    + +  I    +I  S L      PT        VE      +ELY+
Sbjct: 52  -----VNGGVVKFKNKEEFILAFNKI--SLLKFNGFKPT-----AFLVEKAIKHNKELYV 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L +DR +     + S+ GG+DIE++ K    +I  + +D  +G+           + L 
Sbjct: 100 ALTLDRNNKSPVLLVSSNGGVDIEKIPK---SRIKSIDLDIFMGMQEYIKRQALKFIGLD 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +     L  +++K F +KD  L+EINPL +  + +L  LDSKIS +D++L+RH + +
Sbjct: 157 YKYKEQFYALLDSMWKIFTEKDAELVEINPLAVT-DTQLIALDSKISIEDDSLFRHEEYK 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD    D  E++AK+  +S++ L+GNIG + NGAGL +AT+D IKL GG   +FLD+G
Sbjct: 216 --RDEYSSDELEMKAKKKGISFVRLNGNIGLIANGAGLTLATIDQIKLAGGMAGDFLDLG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  D  +VA A +++  DS+ K + INIFGG+ + D + +GI+ A+ ++ I   +V+RL+
Sbjct: 274 GTDDPARVAEAIELV-KDSNPKVLFINIFGGVTKADTVAEGIVQAINKLNITFKIVVRLK 332

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+ ++ ++  T  D+ +A Q++V   K
Sbjct: 333 GFNEAKGKELLKKNEIDSFT--DMGEAIQEVVKLAK 366


>gi|323697830|ref|ZP_08109742.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio sp. ND132]
 gi|323457762|gb|EGB13627.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio desulfuricans
           ND132]
          Length = 692

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 186/380 (48%), Gaps = 28/380 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+ +K L  K  +PV +G  +      + A    P P + +K+Q+ +GGRGK    
Sbjct: 1   MLLDEHHSKLLFDKARIPVPQGAAVFPGEEDDFA-PDYPLP-WFLKAQVLSGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+          +  R++ G  +        G  V  + VE G  I RE YL
Sbjct: 56  -------GGILRIDDPADFPARARKLFGRDI-------RGEAVPYIRVEPGEAIARECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI---GVTSEDVASLCDML 177
           SL V R    +   A  +GG++IE++ +D       LL+ P+    G+    V +    L
Sbjct: 102 SLTVSRERRCILLTAGRKGGVEIEKLGQD------NLLVQPITLPGGMAPHQVRAAFFHL 155

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L  +   D  +L   L++   D  + L EINPLI+  + RL  LD K+  DDN +  H 
Sbjct: 156 GLPRELFKDFSELLDTLFRCMLDNGLLLAEINPLIVTPDDRLVALDGKVEMDDNFVDLHP 215

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +             E  A+   LS++ L G +G MVNGAGLAMATMD++   G   +NFL
Sbjct: 216 EAGAYYRPEHATPEENMARDAGLSFVRLPGWVGLMVNGAGLAMATMDLLNFSGLPASNFL 275

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGADQ ++  A +++  D  V+ I IN+FGGI+ C+ + + +  A+       P+V+
Sbjct: 276 DLGGGADQKRMETALELLFGDHRVQAIFINLFGGILSCEKVAQAMKGALGGQSPKKPIVV 335

Query: 358 RLEGANVDIGNRLIAESGLN 377
           R+ G +   G  ++ E  +N
Sbjct: 336 RMSGKDALQGLEILRELNVN 355


>gi|167044265|gb|ABZ08945.1| putative CoA-ligase [uncultured marine crenarchaeote
           HF4000_APKG5N21]
          Length = 368

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 201/395 (50%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L ++Y + V   +V   V +     + +  P +V+K+Q+  GGRGK    
Sbjct: 1   MRLLEYQAKELFKEYGIRVPTSIVSKDVESGRKDAEKIGYP-FVIKAQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         ++L  T+        G +   V +E  ++  +E+YL
Sbjct: 57  -------GGIQKCHNEDEFELKYPQVLNMTI-------KGEKTRAVLLEKMSEYEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL ++R+      I+S +GG++IE V     ++I       L  VT +    +   + L 
Sbjct: 103 SLFLNRSKRCYTIISSAEGGVEIESVKNQVIREI------GLGDVTKKVAEEVAKEIGLD 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   L K   +K+  L EINPL+I+K+G +  LD KI  DDN+ +RH   +
Sbjct: 157 ANSITYFVDILQKLSKLTIEKEAELTEINPLVILKDGSMMALDGKIMTDDNSNFRH---K 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL    E+   E +A++   S + LDGNI  + NGAGL M+T+D++   GG  A FLDVG
Sbjct: 214 ELTKYQEKTELEKKAEESGFSLVELDGNIAVIGNGAGLVMSTLDMLTDNGGKAACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V  A  +I+   +VK +L+N++GGI++  ++    L A  +  I +P+  RL 
Sbjct: 274 GTATTESVYEALTLISRMKNVKAVLVNLYGGIVKTTIVASAFLQAYDDKIIILPVFARLM 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           GA  +    ++ +S   +  +I  ++A  K+V  V
Sbjct: 334 GAESEKSKDMLKDSETQLSPSI--EEAINKVVMEV 366


>gi|119495818|ref|XP_001264686.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181]
 gi|119412848|gb|EAW22789.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181]
          Length = 629

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/282 (37%), Positives = 172/282 (60%), Gaps = 14/282 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKD-YPQKIFKLLIDPLIGVTSEDVASLCD 175
           ++ L++ VDRT+     +AST+   D+ + + D +P   F          TS  + ++  
Sbjct: 350 DVLLTMTVDRTALSPCIVASTR--PDLAQASSDRFP---FAYTTQEF-SSTSPVLEAVAS 403

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            L+L   AR    +L   L++ F +K+  LLE+   +   +G ++V  ++  FDD A   
Sbjct: 404 HLQLPETARGKLAELTQALWEIFKEKEAYLLEVR--VNFSHGEMQVRGARFGFDDAAFRS 461

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYG 290
             R  D+  LRD+ EE   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + ++G
Sbjct: 462 SGRQEDVHRLRDIEEEVPEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVDALSIHG 521

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+ RCD++ +GI+ A ++++
Sbjct: 522 GHCANFLDTGGKATSETVKSSFRIIRSDPRVKAIFVNIFGGLTRCDMIAEGIIMAFRDLE 581

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +N+P+V+RL G N +IG ++IAESGL +      +DAA+K++
Sbjct: 582 MNVPVVVRLRGTNEEIGQKMIAESGLPLHAFDSFEDAAKKVI 623


>gi|324519937|gb|ADY47520.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 359

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 154/274 (56%), Gaps = 3/274 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL  Y   + + +V SS   AE  ++      Y+VKSQ+ AGGRGKGRF 
Sbjct: 27  LNLQEYQSKKLLEDYGCCIQRFIVASSRDEAEQQMQDFNRRRYMVKSQVLAGGRGKGRFI 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  GGV V    +  +S + E++G  L+TKQTG  G  V  V + +   I RE YL
Sbjct: 87  GGRSDL-GGVAVAEGKQKALSLVEEMVGKILVTKQTGKKGLPVKKVLICEAVSIKRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     + S  GGM IE VA   P+ +FK  ++   G+T E    +   L   
Sbjct: 146 AILMDRETNGPMVVYSPAGGMYIETVAATNPELVFKEPVNIDKGLTKEQADKIAKNLGFN 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          LYK F   D + +EINPL   +  +   +D+K++FDDNA +R  +I 
Sbjct: 206 GVSAERAAHEISCLYKLFIAVDATQVEINPLAETEGMQAYCIDAKLNFDDNAYFRQKEIF 265

Query: 241 ELRDV--SEEDSREIEAKQHNLSYIALDGNIGCM 272
            + +   SE ++REI A +HNL+YIAL+G+IGCM
Sbjct: 266 AMEEASGSEANAREILASEHNLNYIALEGDIGCM 299


>gi|317030887|ref|XP_001392414.2| CoA-ligase [Aspergillus niger CBS 513.88]
          Length = 680

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 172/297 (57%), Gaps = 15/297 (5%)

Query: 102 RVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
           R   + V++ A    + +LSL VDRT+     +AST  G +  +  +      F    + 
Sbjct: 387 RQESIPVKEAALSESDFFLSLTVDRTALSPCILASTSAGFEPAQTGR------FPFAYEG 440

Query: 162 L-IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
              G T+  V ++   L+L   A  +   L   L++ F +K+  LLE+            
Sbjct: 441 TDFGSTTLLVETVASYLQLPATAHDNLAQLLQGLWRVFKEKEAYLLEVR---ANATSAFE 497

Query: 221 VLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNG 275
           V D++ +FDD A     R  D+Q+LR+ +EE   E+EA++  + Y+ L+G  +IG +VNG
Sbjct: 498 VRDARFAFDDAAFRSSGRQEDVQQLRNPAEEVPEEVEAEKDGIVYVKLEGKGSIGTLVNG 557

Query: 276 AGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
           AGLAM T+D + ++GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RC
Sbjct: 558 AGLAMNTVDALTIHGGHCANFLDTGGKATAETVKSSFRIITSDRRVKAIFVNIFGGLTRC 617

Query: 336 DVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           D++ +GI+ A +E+++ +P+V+RL G N + G ++IAESGL +      + AA++++
Sbjct: 618 DMIAEGIILAFQEMEMTVPVVVRLRGTNEERGQQMIAESGLPLEAFDSFEAAAKRVI 674


>gi|325264240|ref|ZP_08130972.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
 gi|324030724|gb|EGB92007.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
          Length = 376

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 203/396 (51%), Gaps = 27/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+  E + K  L ++ +P+   ++++        +  +P P  V+K QI +G RGK    
Sbjct: 1   MDYLEIEGKKQLNRFGIPINDSILLTE----NVDLTKVPYPC-VLKGQILSGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VRV  S +  + +++EI+    I  ++      + C ++     I+ E Y+
Sbjct: 53  -------GAVRVVKS-EEELKEVKEIIEKITINGKS--MEGIIACGFLP----IVEEYYM 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D  +  V  + +  GGMDIEE+A   P+K+ +L  D   G           + EL 
Sbjct: 99  GMTLDVKNRAVIMLFTPFGGMDIEELATTSPEKLMRL--DCTEGFDEAAFRESAKIFELP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L  A    D + +E+NPL ++++G +  +D+K+  DDN+LYR  D  
Sbjct: 157 DERLNKIVDIAKKLSTACFALDSTTIEVNPLAVLEDGSVVAIDAKLVIDDNSLYRQEDYT 216

Query: 241 ELRDVSEEDS-REIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            L   S++ S +E++A +H+L+Y+ LD  GNIG M  GAG+ MATMD I+ YGG   NFL
Sbjct: 217 ILPRTSQQKSLQELDAAEHDLTYVELDPNGNIGTMAGGAGIGMATMDTIRHYGGKVNNFL 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG   +K   A +I+  + +   IL+N+FGGI  C  +  GI  A KE   N  +V+
Sbjct: 277 DLGGGVTSEKTYQAMRILLQNENTDMILVNVFGGINNCADMADGIARAYKEFGNNKKVVV 336

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +  G N + G  +  + G +       D+A Q +++
Sbjct: 337 KSRGFNQEQGWEIYEKLGFSQTKYGTTDEAVQLLLN 372


>gi|218885135|ref|YP_002434456.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756089|gb|ACL06988.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 709

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 189/388 (48%), Gaps = 22/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L     + V  G  +      ++     PGP YV K+Q+  GGRGK    
Sbjct: 1   MFLNEHQSKKLFAAAGIAVPAGDCLGP-EDVDAYAPPFPGPWYV-KAQVLTGGRGK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    +  ++ +  R ILG T+        G  V  V VE   DI +E YL
Sbjct: 55  ------AGGVLRADTPDALRATARTILGMTI-------KGHAVPFVRVEPATDIRKECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++ R    +    S +GGM++E  A      + ++ +D   G+    + +    L   
Sbjct: 102 SFMLSRQRREMLLTTSHRGGMEVEATADSRKPLVQRVPLD--AGLREHHLRAAFFELGAD 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   DL   L++A  D  + L EINPL+    G+   LD K+  DDN +    D+Q
Sbjct: 160 PAGWAGFRDLAERLFRAVRDDGLLLAEINPLVFTGAGQWVALDGKVELDDNVVDLRPDLQ 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                    + E  A+   LSY+ L G +G +VNGAGLAMATMD++   G   ANF+D+G
Sbjct: 220 GYYTPEHHGAEENAARDAGLSYVGLSGWVGLLVNGAGLAMATMDLLNFSGLPAANFMDLG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  A  ++ ++  V+ + IN+FGGI+ C  + + ++ A+   +   P+V+R+ 
Sbjct: 280 GAADGARMRRALDLLFANPQVRAVFINLFGGIVSCAGVARALMEALGTERAAQPVVVRMA 339

Query: 361 GANVDIGNRLI-AESGLNVITAIDLDDA 387
           G     G  L+ A +  +VI A ++ DA
Sbjct: 340 GHESAEGRELLRAFAHPDVIIADEVTDA 367


>gi|134076926|emb|CAK45335.1| unnamed protein product [Aspergillus niger]
          Length = 325

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 172/298 (57%), Gaps = 15/298 (5%)

Query: 102 RVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
           R   + V++ A    + +LSL VDRT+     +AST  G +  +  +      F    + 
Sbjct: 32  RQESIPVKEAALSESDFFLSLTVDRTALSPCILASTSAGFEPAQTGR------FPFAYEG 85

Query: 162 L-IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
              G T+  V ++   L+L   A  +   L   L++ F +K+  LLE+            
Sbjct: 86  TDFGSTTLLVETVASYLQLPATAHDNLAQLLQGLWRVFKEKEAYLLEVRA---NATSAFE 142

Query: 221 VLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNG 275
           V D++ +FDD A     R  D+Q+LR+ +EE   E+EA++  + Y+ L+G  +IG +VNG
Sbjct: 143 VRDARFAFDDAAFRSSGRQEDVQQLRNPAEEVPEEVEAEKDGIVYVKLEGKGSIGTLVNG 202

Query: 276 AGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
           AGLAM T+D + ++GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RC
Sbjct: 203 AGLAMNTVDALTIHGGHCANFLDTGGKATAETVKSSFRIITSDRRVKAIFVNIFGGLTRC 262

Query: 336 DVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           D++ +GI+ A +E+++ +P+V+RL G N + G ++IAESGL +      + AA++++ 
Sbjct: 263 DMIAEGIILAFQEMEMTVPVVVRLRGTNEERGQQMIAESGLPLEAFDSFEAAAKRVIE 320


>gi|325264212|ref|ZP_08130944.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
 gi|324030696|gb|EGB91979.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
          Length = 377

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 28/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+  E + KA L+++ +PV   ++++  +  E    T P    V+K QI +G RGK    
Sbjct: 1   MDYLEIEGKAQLKRFGIPVNDSILLNGDNIPEEV--TYP---CVLKGQILSGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VRV  S +    ++++++    I       G  +  V       I  E YL
Sbjct: 53  -------GAVRVVKS-EEEFREVKKVIEEITIN------GKHMEGVAACGFLPIADEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D    ++  + +  GGM+IEE+A + P+K+ +   +   G   E       + +L 
Sbjct: 99  GMTLDVKERVMVMLFTPYGGMEIEELAVNAPEKLLRF--NCTAGFDREVFLGEASVFDLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L +A  + D + +EINPL ++++G +  LDSK+  DDN+L R  D  
Sbjct: 157 KERLNKVADIAEKLCRACFELDATTMEINPLAVLEDGSMLALDSKLVIDDNSLVRQGDYT 216

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            L R   ++  +E +AK H+L+Y+ L  +G+IG M  GAG+ MATMD I+ YGG   NFL
Sbjct: 217 ILPRTAQKKSPQEEDAKAHDLTYVELNPEGDIGTMAGGAGIGMATMDTIRHYGGCVNNFL 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG   +K   A KI+  + S   IL+N+FGGI  C  + +GI  A KE+ I   +V+
Sbjct: 277 DLGGGVTAEKTYHAMKILLQNKSTNYILVNVFGGINNCADMAEGIARAYKELGIQKTVVV 336

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +  G N + G  +    G  + T     D A + +  +KGV
Sbjct: 337 KSRGFNQEQGWTIYENLGF-LQTKYGTTDEAVQTLMKIKGV 376


>gi|317486380|ref|ZP_07945208.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
 gi|316922369|gb|EFV43627.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
          Length = 373

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 193/397 (48%), Gaps = 26/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK   R+  +P  KGV++  +   + A   +  P  V+KSQ+ +GGRGK    
Sbjct: 1   MKLFEYQAKEAFREKGLPTPKGVLVRGMDELDGAFAEVGFPC-VLKSQVLSGGRGKAGLI 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  D++       +L     ++R +L                    VE+  DI RE+YL
Sbjct: 60  KVVKDAESAKATAKTLFESEHNVRMLL--------------------VEEAVDIDREIYL 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD     +  I   +GG++IE++A   P KI  + +D   G+    V +L   + L 
Sbjct: 100 SITVDPVESKIMLIGCAEGGVEIEKLAATDPDKIVTVRVDIAEGLGGYHVNNLTYGMGLS 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F   D  L EINPL I K+G+    D K+  DDN+++R     
Sbjct: 160 GDLGKQVGAVVRGLYKTFRAYDAQLAEINPLFITKDGKAIAGDGKLIIDDNSVWRQPSYP 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + +  E EA Q  + Y+  +G+I  M  GAGL     D+I   GG PA +++  
Sbjct: 220 LTRDYFDSEV-EFEAAQEGIPYLQFNGDIALMCAGAGLTTTVFDLINDAGGHPATYVEF- 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  K     ++     S K IL+  FG I R DV+ +G++ A+K  +   P+V  + 
Sbjct: 278 GGANYTKAVRTMELCLKTPS-KVILVVTFGTIARADVMAQGLVEAIKAHQPKQPIVTCIR 336

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +    ++ ++GL  +T  + ++A Q+ V    G
Sbjct: 337 GTNEEEAFAILRDAGLEPLT--NTEEAVQRAVDIAAG 371


>gi|85706365|ref|ZP_01037459.1| succinyl-CoA synthetase beta subunit [Roseovarius sp. 217]
 gi|85669138|gb|EAQ24005.1| succinyl-CoA synthetase beta subunit [Roseovarius sp. 217]
          Length = 391

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 198/399 (49%), Gaps = 22/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQ+K LL +Y V V +G    +   A+   K +    YVVK+QI AGGRG     
Sbjct: 1   MFLAEYQSKELLAQYGVHVPEGRPARTPDEAQRLCKEIDARKYVVKAQIGAGGRGLAGGI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              A          +  +V  + R +LGSTL+T QTGP G  V  V +E   DI +  ++
Sbjct: 61  RFAA----------TPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAK---DYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           ++ +D  +G    +AS  GG++ E+ A+   D  Q        PL   + E   +L   L
Sbjct: 111 AIALDPETGQPMLLASGAGGVEFEQRARMDEDTAQSC------PLPPDSPESRTALATFL 164

Query: 178 ELQGQARIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
              G        +        AF + DM+L+EINP     +GR   +D+K++ D NA +R
Sbjct: 165 SGVGMTEAQEAAITAIFAARLAFTENDMTLIEINPFARTGDGRWMAVDAKVAIDPNAGFR 224

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             +   +       + E+ A++HN++ + L+GNIG + NGAGL +AT D+I   GG  AN
Sbjct: 225 RPEFASMVADRPAPADELAAQKHNINLVRLEGNIGVVANGAGLGLATNDLIMDAGGKAAN 284

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM-RCDVLVKGILSAVKEVKINIP 354
           F+D+   A    VA   +I+ +D  V  IL+ I GG M   D + +G+  A  +    +P
Sbjct: 285 FMDIRTTASSMDVARGVEILLADDRVTAILLTIHGGGMTSADTVAEGVNFAYAKATRKLP 344

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           ++  + G + D G+R++ E  + V +   L  A  ++V 
Sbjct: 345 VIAYISGKHADWGHRILRERKVPVESCDTLSAAVGRVVE 383


>gi|115525207|ref|YP_782118.1| succinate--CoA ligase (ADP-forming) [Rhodopseudomonas palustris
           BisA53]
 gi|115519154|gb|ABJ07138.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 375

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 183/374 (48%), Gaps = 22/374 (5%)

Query: 1   MNIHEYQAKAL-LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ E+ AK L L    +      V      A +A+  L   +  +K+Q+  G RGK   
Sbjct: 1   MNLLEHAAKTLVLALAGIATLPSQVCHKPEDAAAAVAVLSPAM--IKAQVPTGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+R   + +   +  R+IL  T+        G  V+ V VE  ADI  E Y
Sbjct: 57  --------GGIRPADTPEEARAVTRDILAMTI-------DGQDVSSVLVEQRADIADEFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L D    +   + S +GG++IE  A   P  + +  +D L G    +       L+L
Sbjct: 102 AAVLCDTARRLPVVLFSPEGGVEIETTASRSPASLRRYEVDVLRGFGRSEAELFVTGLDL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G A     D+   LY+AF D D  L+EINPL ++ + R+  LD+K++ D+ A +R   +
Sbjct: 162 RG-ADTAVVDVLVRLYRAFVDSDAELVEINPLAVLTDRRVVALDAKVTLDEAAAFRQPTL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E    +  L ++  DGN+G + NGAGL M TMD+I+ +GG PANFL++
Sbjct: 221 AAAAAPEPATELERRGAEAGLKFLQFDGNVGVLANGAGLTMTTMDVIRHFGGRPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A  ++ +   VK +++N  G   R DV+ +G++ A + +K ++P+   +
Sbjct: 281 GGEA-YTKAEIALGLVLAHPGVKSLVVNFCGAFARTDVMAEGVVRAWQTLKPSLPVFFSI 339

Query: 360 EGANVDIGNRLIAE 373
            G   +   RL+ E
Sbjct: 340 HGTGEEEAIRLVRE 353


>gi|149202194|ref|ZP_01879167.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149144292|gb|EDM32323.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 391

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 198/399 (49%), Gaps = 22/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQ+K LL +Y V    G    S   A+   K +    YVVK+QI AGGRG     
Sbjct: 1   MFLAEYQSKELLAQYGVLAPDGRPARSPDEAQRLCKEIDARKYVVKAQIGAGGRGLAGGI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              A          +  +V  + R +LGSTL+T QTGP G  V  V +E   DI +  ++
Sbjct: 61  RFAA----------TPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAK---DYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           ++  D  +G    +AS  GG++ E+ A+   D  Q        PL   + E  A +   L
Sbjct: 111 AIAFDPETGQPMLLASGAGGVEFEQRARMDEDTAQSC------PLPSDSPEARAKIAPFL 164

Query: 178 ELQG--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
              G  +A+    D       AF + DM+L+EINP     +GR   +D+K++ D NA +R
Sbjct: 165 TGVGISEAQDAAIDAIFAARLAFTENDMTLIEINPFARTTDGRWMAVDAKVAIDPNAGFR 224

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             +   +       + E+ A++HN++ + L+GNIG + NGAGL +AT D+I   GG  AN
Sbjct: 225 RPEFASMVADRPAPADELAAQKHNINLVRLEGNIGVVANGAGLGLATNDMITDAGGKAAN 284

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM-RCDVLVKGILSAVKEVKINIP 354
           F+D+   A    VA   +I+ +D  V  IL+ I GG M   D + +G+  A  +    +P
Sbjct: 285 FMDIRTTASSMDVARGVEILLADDRVSAILLTIHGGGMTSADTVAEGVNFAYAKATRKLP 344

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           ++  + G + D G+R++ E  + V +   L  A  ++V 
Sbjct: 345 VIAYISGKHADWGHRILRERKVPVESCDTLSAAVGRVVE 383


>gi|2624396|emb|CAA05718.1| succinyl-CoA synthetase beta sub-unit [Rhizobium leguminosarum]
          Length = 125

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S+  V++  +E+LG+TL+T QTG    +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAXKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVD 125
           SLLVD
Sbjct: 121 SLLVD 125


>gi|242279515|ref|YP_002991644.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242122409|gb|ACS80105.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 698

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 195/392 (49%), Gaps = 43/392 (10%)

Query: 1   MNIHEYQAKALLRKY-NVPVAKGVVISSVHAAESAIKTLPG-----PL-YVVKSQIHAGG 53
           M ++E+ +K LL++   +PV  GV I+         K LPG     PL +++K+Q+  GG
Sbjct: 1   MLLNEHLSKVLLKEAAGLPVPTGVKITE--------KDLPGLEPYFPLPWILKAQVPVGG 52

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           GG++   S        R+ILG  +        G++V  +  E   D
Sbjct: 53  RGKA----------GGIQKVDSRDEYEKTARQILGMEI-------KGNKVPFLRAEPAVD 95

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           I +E YLSL + R    V      +GG++IE +    P+ +    I    G+    + + 
Sbjct: 96  IRKEFYLSLTLSRQRRKVIMTVGREGGVEIENMG---PENLLIQEISLPGGLQPNQIRAA 152

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              + +  +  +D  ++  NLY    D  + L EINPL +   G+L  LD KI  DDN +
Sbjct: 153 FFHIGIAKELFVDFSNIVKNLYNTMIDYGLLLAEINPLALTGYGKLLALDGKIEMDDNIV 212

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
             +   ++          E  A+   +S+++L G +G + NGAGLAMA+MD +       
Sbjct: 213 DLNPAFEKFYQPEHSTPVENIARDAGMSFVSLKGWVGLIANGAGLAMASMDALNFSDLPA 272

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GG ADQ ++  A +++  D  VK ILIN+FGGI+ C+++ K +++A+   +   
Sbjct: 273 ANFLDLGGAADQKRIETALRLLFDDDQVKAILINLFGGILSCELVAKALVAALGGKEPEK 332

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           P+V+R+ G +        AE GL V+  +  D
Sbjct: 333 PIVVRMSGNS--------AEEGLEVLKQVKGD 356


>gi|225574243|ref|ZP_03782853.1| hypothetical protein RUMHYD_02307 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038533|gb|EEG48779.1| hypothetical protein RUMHYD_02307 [Blautia hydrogenotrophica DSM
           10507]
          Length = 373

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 199/386 (51%), Gaps = 32/386 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EY+ K L+R++ +PV +  +I+   A       +P P +V+K+Q+  GGRGK    
Sbjct: 1   MDLFEYEGKQLMRQFEIPVPESCLITDSEATPP----MPYP-FVLKAQVMTGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +  +      + IL   +          RV+ +  E      RELYL
Sbjct: 53  -------GGVKVCADEREFEIHKKNILNMEI-------KNHRVHGLLAEQMVKAKRELYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +   S     IAS  GGMDIE+++++ P +I K+ IDP  G+       L   LE++
Sbjct: 99  SITLQGVSK-PTLIASRMGGMDIEQISRETPDEIVKMEIDPFTGLKGYQKKYLAKRLEIE 157

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D       + +AF D    L+EINPL ++ +GRL  +DSK S DD+       ++
Sbjct: 158 DKQ--DFYQFIGKVERAFFDTGAKLVEINPLGVV-DGRLMAMDSKFSLDDHVKKMQGTVE 214

Query: 241 ELRDVSEEDSR--EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +L    E+  R    E +   ++Y+ LDG+IG + +GAG  M T+D++   G   A+F +
Sbjct: 215 QLEKDREKLYRYQAPEKEMTTITYVPLDGDIGLISDGAGTGMLTLDLLNDEGLHVASFCE 274

Query: 299 VGGGADQDKVAAAFKI-ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           +GG   ++ +  A  + +T    +KG+LI + GG  R D +  GI   VKE ++ IP+  
Sbjct: 275 LGGMTTEEVMYRAMDLTLTGHPQIKGVLIVLIGGFNRMDNMALGITKYVKEHQVKIPIYT 334

Query: 358 RLEGANVDIGNRLIAESGL---NVIT 380
           R+ G   ++G + +  +G+   NV+T
Sbjct: 335 RMCGTMEEVGLKTMEAAGMSTYNVLT 360


>gi|76664064|emb|CAI62554.1| succinyl-CoA ligase [Nyctotherus ovalis]
          Length = 163

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 5/155 (3%)

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           + D  E +A    ++Y+AL GNIGCMVNGAGLAMATMDIIKL GG PANFLDVGGGA   
Sbjct: 8   DTDPNEEKASAIGINYVALSGNIGCMVNGAGLAMATMDIIKLKGGEPANFLDVGGGASAS 67

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
           +V +AF+I+ S   VKGIL+NIFGGIMRCD++  GI+ A K + + +PLV+RL G N   
Sbjct: 68  QVKSAFEILESHPQVKGILVNIFGGIMRCDIIADGIIQACKSINLKVPLVVRLTGTNSKQ 127

Query: 367 G----NRLIAES-GLNVITAIDLDDAAQKIVHAVK 396
           G    N+   ES    +ITA +LDDAA K+V A+K
Sbjct: 128 GMEMLNKFTRESKNFKIITADNLDDAATKVVAALK 162


>gi|289810701|ref|ZP_06541330.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 149

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 117/141 (82%)

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVGGGA +++V  AFK
Sbjct: 1   QAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFK 60

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           II SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLEG N ++G + +A+
Sbjct: 61  IILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKKLAD 120

Query: 374 SGLNVITAIDLDDAAQKIVHA 394
           SGLN+I A  L DAAQ++V A
Sbjct: 121 SGLNIIAAKSLTDAAQQVVAA 141


>gi|146322592|ref|XP_752448.2| succinyl-CoA synthetase subunit alpha [Aspergillus fumigatus Af293]
 gi|129557744|gb|EAL90410.2| succinyl-CoA synthetase subunit alpha, putative [Aspergillus
           fumigatus Af293]
 gi|159131203|gb|EDP56316.1| succinyl-CoA synthetase, alpha subunit, putative [Aspergillus
           fumigatus A1163]
          Length = 678

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/282 (36%), Positives = 170/282 (60%), Gaps = 14/282 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKD-YPQKIFKLLIDPLIGVTSEDVASLCD 175
           ++ L++ VDRT+     +AST+   D+ + + D +P   F          TS  + S+  
Sbjct: 399 DVLLTMTVDRTALSPCIVASTR--PDLAQASSDRFP---FAYTTQEF-SSTSPVLKSVAS 452

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            L+L   A     +L   L+  F +K+  LLE+   + + +G ++V  ++  FDD A   
Sbjct: 453 HLQLPETACGKLAELMQALWGIFKEKEAYLLEVR--VNLSHGEMQVRGARFGFDDAAFRS 510

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYG 290
             R  D+  LRD  +E   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + ++G
Sbjct: 511 SGRQEDLHRLRDKEKEVPEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVDALSIHG 570

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+ RCD++ +GI+ A ++++
Sbjct: 571 GHCANFLDTGGKATSETVKSSFRIIRSDPRVKAIFVNIFGGLTRCDMIAEGIIMAFRDLE 630

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +N+P+V+RL G N +IG ++IAESGL +      +DAA+K++
Sbjct: 631 MNVPVVVRLRGTNEEIGQKMIAESGLPLHAFDSFEDAAKKVI 672


>gi|120602142|ref|YP_966542.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris DP4]
 gi|120562371|gb|ABM28115.1| succinyl-CoA synthetase (ADP-forming) beta subunit / succinyl-CoA
           synthetase (ADP-forming) alpha subunit [Desulfovibrio
           vulgaris DP4]
          Length = 691

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 192/397 (48%), Gaps = 31/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L  +  +   +G++  S    E  +     P +V K+Q+ AGGRGK    
Sbjct: 1   MFLNEHQSKRLFEEAGIETPQGIMTDSA-GIEGCLPPFDAPWFV-KAQVLAGGRGK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR    L  +    ++ILG  +        G  V  V +E    I RE Y+
Sbjct: 55  ------AGGVRRADDLAGLRDVAKDILGMRI-------GGHAVPFVRIEPATAIARECYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDML 177
           S +V R    + F AS  GG+++E       + +      PL G   E V   A  C  +
Sbjct: 102 SFMVSRKRRELLFTASGSGGVEVESGQGALVRAV------PLTGEMPEHVIRSAFFCTGV 155

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             +  A     +    L+ A  D  + L E+NPL++  +GR   LD K+  DDN +    
Sbjct: 156 GREHWAGFR--EFVLRLHGAVRDYGLLLAEVNPLVLTGDGRWLALDGKVEVDDNVVDIRP 213

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+            E  A++  LSY+ L G +G +VNGAGLAMATMD++   G A ANF+
Sbjct: 214 DLLRFHTPEHLAPEENAAREAGLSYVELKGWVGLLVNGAGLAMATMDLLNFSGLAAANFM 273

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GG AD  ++  A +++  +  V+ + +N+FGGI+ C  +   ++ A+ + +   P+V+
Sbjct: 274 DLGGAADVPRMRRALELLFGNPQVRVVCVNLFGGIVSCAAVAGALVEALGDGRAAKPVVV 333

Query: 358 RLEGANVDIGNRLIAESG-LNVITAIDLDDAAQKIVH 393
           R++G     G +L+      +V  A D+D A   + H
Sbjct: 334 RMDGFEAAEGRQLLERRAHPDVHVARDIDHALDLLRH 370


>gi|325066867|ref|ZP_08125540.1| succinyl-CoA synthetase subunit beta [Actinomyces oris K20]
          Length = 255

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 136/208 (65%), Gaps = 6/208 (2%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           L++ F  +D +L+E+NPL+   +GR+  LD K++ DDN+ +RH    EL D +  D  E 
Sbjct: 35  LWEVFTAEDATLVEVNPLVKATDGRIIALDGKVTLDDNSRFRHPAHAELVDNAATDPLEA 94

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGG-APANFLDVGGGADQDKV 308
            A++  L+Y+ L+G +G + NGAGL M+T+D++    + +GG  PANFLD+GGG+  + +
Sbjct: 95  RAREAGLNYVRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGMKPANFLDLGGGSSAEVM 154

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIG 367
           A   +++ SD  V+ IL+N+FGGI  CD + +GI++AV+ +  +  P+V+RL+G N D G
Sbjct: 155 ATGLEVVASDPQVRAILVNVFGGITSCDTVAQGIVTAVESLGGLPKPVVVRLDGNNADTG 214

Query: 368 NRLIAESGLNVITAIDLDDAAQKIVHAV 395
             ++A++ +  +T +D  D A  +V A+
Sbjct: 215 RAILADAAIEGVTVVDTMDGAADVVTAI 242


>gi|307103466|gb|EFN51726.1| hypothetical protein CHLNCDRAFT_139908 [Chlorella variabilis]
          Length = 310

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 143/258 (55%), Gaps = 39/258 (15%)

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
           G+  F    QGG+ I + A + P    K+L   L G   + +     +   +  A     
Sbjct: 82  GLGKFTNGLQGGVHICK-ASEAPSLAAKMLGGTLSGAKGKPMVEGLKVTTDKAAA----A 136

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
           +    LY+ F +KD +++E+NPL       L   D+K+ FDDNA +R  ++  +RD S+E
Sbjct: 137 EQIKGLYRLFVEKDCTMVEVNPLAETDTA-LVAADAKLGFDDNAAFRQPELFAMRDESQE 195

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           D RE+ A +++L+YI LDG+IGCMVNGA              GAPANFLDV         
Sbjct: 196 DPREVAAAKYDLNYIGLDGSIGCMVNGAAAR-----------GAPANFLDV--------- 235

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
                        K IL+NIFGGIMRCDV+  GI++A K+V + +PL++RLEG NV+ G 
Sbjct: 236 -------------KAILVNIFGGIMRCDVIASGIVNAAKQVGVQVPLIVRLEGTNVERGK 282

Query: 369 RLIAESGLNVITAIDLDD 386
            ++A SG+N+I+  DLDD
Sbjct: 283 EILAGSGMNLISGSDLDD 300



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP--GPLYVVKSQIHAGGRGKGR 58
           +N+HEYQ   ++ +Y + V  G+ +  V     A + +       VVKSQI AGGRG G+
Sbjct: 26  LNVHEYQGAQIMSQYGINVPPGIPVHKVEEVGPAAQKMADENGEVVVKSQILAGGRGLGK 85

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP 98
           F       +GGV +        S   ++LG TL   +  P
Sbjct: 86  FTN---GLQGGVHI-CKASEAPSLAAKMLGGTLSGAKGKP 121


>gi|315049905|ref|XP_003174327.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893]
 gi|311342294|gb|EFR01497.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893]
          Length = 687

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 141/232 (60%), Gaps = 8/232 (3%)

Query: 169 DVASLCDMLELQGQARI---DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           D+AS+ D+L       +       L   L   F  K+  +LEI   I      + VLD++
Sbjct: 452 DIASIADILGFSKNHPVAIESLEKLLHGLMNIFVSKEAFILEIKASITPDTQGIHVLDTR 511

Query: 226 ISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAM 280
             FDD A     R  DI  LR+ +EE   E++A++  + YI L  +G IG +VNGAGLAM
Sbjct: 512 FGFDDAAHRSSGRQSDIHGLRNKAEEVPAEVDAEKDGIVYITLPGEGRIGTLVNGAGLAM 571

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK 340
            T+D + L+GG+ ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +CD++ +
Sbjct: 572 NTVDALTLHGGSCANFLDTGGKATAETVKSSFRVILSDPRVKSIFVNIFGGLTKCDMIAE 631

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           GI+ A +++ +N+P+V+RL G N ++G ++IAESGL +      + AA+K++
Sbjct: 632 GIIMAFRDLGMNVPVVVRLRGTNEELGQKMIAESGLPLHAFDSFEQAAKKVI 683


>gi|46580542|ref|YP_011350.1| succinyl-CoA synthase, beta/subunit alphas [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46449961|gb|AAS96610.1| succinyl-CoA synthase, beta/alpha subunits [Desulfovibrio vulgaris
           str. Hildenborough]
          Length = 709

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 47/405 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L  +  +   +G++  S    E  +     P +V K+Q+ AGGRGK    
Sbjct: 19  MFLNEHQSKRLFEEAGIETPQGIMTDSA-GIEGCLPPFDAPWFV-KAQVLAGGRGK---- 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR    L  +    ++ILG  +        G  V  V +E    I RE Y+
Sbjct: 73  ------AGGVRRADDLAGLRDVAKDILGMRI-------GGHAVPFVRIEPATAIARECYV 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEE----------VAKDYPQKIFKLLIDPLIGVTSEDV 170
           S +V R    + F AS  GG+++E           +  + P+ + +      IGV  E  
Sbjct: 120 SFMVSRKRRELLFTASGSGGVEVESGQGALVCAVPLTGEMPEHVIRSAFF-CIGVGREHW 178

Query: 171 ASLCDM-LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           A   +  L L G  R               D  + L E+NPL++  +GR   LD K+  D
Sbjct: 179 AGFREFVLRLHGAVR---------------DYGLLLAEVNPLVLTGDGRWLALDGKVEVD 223

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DN +    D+            E  A++  LSY+ L G +G +VNGAGLAMATMD++   
Sbjct: 224 DNVVDIRPDLLRFHTPEHLAPEENAAREAGLSYVELKGWVGLLVNGAGLAMATMDLLNFS 283

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           G A ANF+D+GG AD  ++  A +++  +  V+ + +N+FGGI+ C  +   ++ A+ + 
Sbjct: 284 GLAAANFMDLGGAADVPRMRRALELLFGNPQVRVVCVNLFGGIVSCAAVAGALVEALGDG 343

Query: 350 KINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDDAAQKIVH 393
           +   P+V+R++G     G +L+      +V  A D+D A   + H
Sbjct: 344 RAAKPVVVRMDGFEAAEGRQLLERRAHPDVHVARDIDHALDLLRH 388


>gi|242768237|ref|XP_002341527.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218724723|gb|EED24140.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 678

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/284 (36%), Positives = 154/284 (54%), Gaps = 16/284 (5%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           + +LS+ VDRTS +   +A + G   ++    +  +Y    F    D  I   SE V+ L
Sbjct: 395 DFHLSITVDRTS-LSPCVAVSSGNQSLKSSLRIPFNYTNPAFSRAADNTI--QSEIVSFL 451

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               E Q       G     LYK F D +  +LE        +  + V D++  FDD A 
Sbjct: 452 GYSDECQETV----GKYLQQLYKIFRDNEAFVLETR-ASFSPDKEVVVHDARFGFDDAAH 506

Query: 234 Y---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKL 288
               RH  + +LRD++ E   E+ A+   + YI L+G  +IG +VNGAGLAM T+D++ L
Sbjct: 507 KSSGRHEKLHQLRDIAAEVPEEVRAENSGIVYIKLEGEGSIGTLVNGAGLAMNTVDVLIL 566

Query: 289 YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
            GG PANFLD GG A    V   F I+  D+ V  I +NIFGG+ RCD++ +GI+ A +E
Sbjct: 567 KGGKPANFLDTGGKATAATVKECFSILCEDARVNTIFVNIFGGLTRCDMIAEGIMDAFRE 626

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + + +P+V+RL G N + G +LIAESGL +      D+AA K +
Sbjct: 627 LDMKVPVVVRLRGTNEEKGQKLIAESGLPLHAFDSFDEAADKAI 670


>gi|311234280|gb|ADP87134.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris
           RCH1]
          Length = 691

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 47/405 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L  +  +   +G++  S    E  +     P +V K+Q+ AGGRGK    
Sbjct: 1   MFLNEHQSKRLFEEAGIETPQGIMTDSA-GIEGCLPPFDAPWFV-KAQVLAGGRGK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR    L  +    ++ILG  +        G  V  V +E    I RE Y+
Sbjct: 55  ------AGGVRRADDLAGLRDVAKDILGMRI-------GGHAVPFVRIEPATAIARECYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEE----------VAKDYPQKIFKLLIDPLIGVTSEDV 170
           S +V R    + F AS  GG+++E           +  + P+ + +      IGV  E  
Sbjct: 102 SFMVSRKRRELLFTASGSGGVEVESGQGALVCAVPLTGEMPEHVIRSAFF-CIGVGREHW 160

Query: 171 ASLCDM-LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           A   +  L L G  R               D  + L E+NPL++  +GR   LD K+  D
Sbjct: 161 AGFREFVLRLHGAVR---------------DYGLLLAEVNPLVLTGDGRWLALDGKVEVD 205

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DN +    D+            E  A++  LSY+ L G +G +VNGAGLAMATMD++   
Sbjct: 206 DNVVDIRPDLLRFHTPEHLAPEENAAREAGLSYVELKGWVGLLVNGAGLAMATMDLLNFS 265

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           G A ANF+D+GG AD  ++  A +++  +  V+ + +N+FGGI+ C  +   ++ A+ + 
Sbjct: 266 GLAAANFMDLGGAADVPRMRRALELLFGNPQVRVVCVNLFGGIVSCAAVAGALVEALGDG 325

Query: 350 KINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDDAAQKIVH 393
           +   P+V+R++G     G +L+      +V  A D+D A   + H
Sbjct: 326 RAAKPVVVRMDGFEAAEGRQLLERRAHPDVHVARDIDHALDLLRH 370


>gi|56783615|dbj|BAD81060.1| putative succinyl-CoA synthetase beta subunit [Acidithiobacillus
           thiooxidans]
          Length = 222

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 133/237 (56%), Gaps = 20/237 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +  +PV + +   SV  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKRLLAEEGIPVPRAIPAFSVREAVNQARELGGPAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  S+  V    +E+LG  L+T QTG     V  + +E+ + I RELYL
Sbjct: 58  -------GGVRVVHSIAGVEKAAQELLGKPLVTAQTGVQAQHVAALLIEEPSSIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-----CD 175
           +L+VDR    + F+A+ +GGMDIEE+A   P  + KL+++P  G        L      D
Sbjct: 111 ALMVDRAQARITFLATREGGMDIEELAVTRPDALKKLVVNPSTGFLPFQARQLGFEFGLD 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             ++Q   RI  G     +Y+     D  ++EINPL +  +GRL  LD+K+  DDNA
Sbjct: 171 TSQVQQLTRIMQG-----MYRLAQKLDALMVEINPLAVTSDGRLLALDAKLVMDDNA 222


>gi|302658494|ref|XP_003020950.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton
           verrucosum HKI 0517]
 gi|291184822|gb|EFE40332.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton
           verrucosum HKI 0517]
          Length = 698

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 142/232 (61%), Gaps = 8/232 (3%)

Query: 169 DVASLCDML---ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           D+AS+ D L   +    A      L   L   F  K+  LLE+   I      ++++D++
Sbjct: 463 DIASVKDTLGFTKYPSMATESLEKLLHGLMNIFVTKEAFLLEVKAGIAPDTNNIQIIDAR 522

Query: 226 ISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAM 280
             FDD A     R  DI  LR+ ++E   E+EA++  + YI L  +G IG +VNGAGLAM
Sbjct: 523 FGFDDAAYRSSGRQGDIHVLRNKADEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAM 582

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK 340
            T+D + L+GG+ ANFLD GG A  + V ++F++I SD  VKGI +NIFGG+ +CD++ +
Sbjct: 583 NTVDALTLHGGSCANFLDTGGKATAETVKSSFRVILSDPRVKGIFVNIFGGLTKCDMIAE 642

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           GI+ A +++ + +P+V+RL G N ++G ++IAESGL +      + AA+K++
Sbjct: 643 GIMMAFRDLGMKVPVVVRLRGTNEELGQKMIAESGLPLHAFDSFEQAAKKVI 694


>gi|119501711|ref|XP_001267612.1| succinyl-CoA synthetase beta chain [Neosartorya fischeri NRRL 181]
 gi|119415778|gb|EAW25715.1| succinyl-CoA synthetase beta chain [Neosartorya fischeri NRRL 181]
          Length = 247

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 140/249 (56%), Gaps = 8/249 (3%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  L T+QT P+G  V  +Y+    D+ +E YLSL  DR       + S QGG++IE 
Sbjct: 1   MLGHYLTTQQTPPSGLLVRKLYIYKAVDVEQEFYLSLTFDRERYSPVILISDQGGVNIES 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
                  K+ K   +   G+T+E +A +   L    +       +   + K F ++D  L
Sbjct: 61  NQ----DKLHKFWFNLSRGITAETMAGIQKQLCFTNKEMPTIESIIRQMIKLFEERDAIL 116

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI--QELRDVSEEDSREIEAKQHNLSYI 263
           LE+NPL+    G    LD+K  FD+ A +R  +I  +E R    ED  E EA++H L YI
Sbjct: 117 LELNPLVRTPEGCFVCLDAKFDFDNAAQFRQPEIFSKEERMPGFED--EYEAQKHGLVYI 174

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            L G+IG +VNGAGLAMAT D+I L+GG  ANFLD+GG A  + +  AF+I++ D  V+G
Sbjct: 175 RLHGHIGNIVNGAGLAMATNDLINLHGGKCANFLDIGGKATTETLLKAFEILSRDQQVRG 234

Query: 324 ILINIFGGI 332
           I +NIFG  
Sbjct: 235 IFVNIFGAF 243


>gi|212542507|ref|XP_002151408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
 gi|210066315|gb|EEA20408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
          Length = 676

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRD 244
           G     LYK F   +  +LE       +   + V +++  FDD A     RH  + +LRD
Sbjct: 463 GKYLQGLYKIFKTNEAFVLETRASFSSEK-NIVVHEARFGFDDAAYKSSGRHEKLHQLRD 521

Query: 245 VSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           V+ E   E+ A++  + Y+ L  DG+IG +VNGAGLAM T+D + L GG PANFLD GG 
Sbjct: 522 VAAEVPEEVRAEKSGIVYVKLNGDGSIGTLVNGAGLAMNTVDALILKGGKPANFLDTGGK 581

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A    V   F I+  D+ VK I +NIFGG++RCD++ +GI+ A KE+ + IP+V+RL G 
Sbjct: 582 ATTATVKECFSILCEDARVKTIFVNIFGGLIRCDMIAEGIMEAFKELDMKIPVVVRLRGT 641

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           N + G +LIAESGL +      ++AA+K++   K
Sbjct: 642 NEEKGQKLIAESGLPLHAFDSFEEAAEKVISLTK 675


>gi|327293844|ref|XP_003231618.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS
           118892]
 gi|326466246|gb|EGD91699.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS
           118892]
          Length = 689

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 132/208 (63%), Gaps = 5/208 (2%)

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVS 246
           L   L   F  K+  LLE+   I      +++L+++  FDD A     R  DI  LR+ +
Sbjct: 478 LLHGLMNVFVTKEAFLLEVKAGITPDTKDIQILEARFGFDDAAYRSSGRQGDIHALRNKA 537

Query: 247 EEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
           +E   E+EA+++ + YI L  +G IG +VNGAGLAM T+D + L+GG+ ANFLD GG A 
Sbjct: 538 DEVPAEVEAEKNGIVYITLPGEGRIGTLVNGAGLAMNTVDALTLHGGSCANFLDTGGKAT 597

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
            + V ++F++I SD  VK I +NIFGG+ +CD++ +G++ A +++ + +P+V+RL G N 
Sbjct: 598 AETVKSSFQVILSDPRVKSIFVNIFGGLTKCDMIAEGVMMAFRDLGMKVPVVVRLRGTNE 657

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIV 392
            +G ++IAESGL +      + AA+K++
Sbjct: 658 QLGQKMIAESGLPLHAFDSFEQAAKKVI 685


>gi|332704472|ref|ZP_08424560.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554621|gb|EGJ51665.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 721

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 188/393 (47%), Gaps = 30/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPLYVVKSQIHAGGRGKGRF 59
           M + E  +K L R+  V V  G  +     +E   + + P P Y+ K+Q+  GGRGK   
Sbjct: 1   MLLDEQASKRLFREAGVSVPDGECVEP--GSEDGFRPSFPPPWYL-KAQVLTGGRGK--- 54

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV      +++    RE+    +        G R   + +E   D +RE Y
Sbjct: 55  -------AGGVLRVDDARALPGRARELFAKDI-------RGHRPPYLLLEPAVDFVRECY 100

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLE 178
           +S  V R    +    S +GG+D+E  A    Q I      PL  G    ++ +    L+
Sbjct: 101 VSFAVSRDRASLVLSVSPRGGVDVERSADVLTQVI------PLPAGPAERNMRAAFFHLK 154

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           +  +      +L   L+ A     + L EINPL++ ++GR   LD K   DDNA     +
Sbjct: 155 VGKEYWPGFRELVLRLFDAVRQNSLLLAEINPLVLTRDGRWLALDGKAEIDDNAAALRPE 214

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           ++   D       ++ A+   +S++ L G +GCMVNGAGLAMATMD++ L G   ANFLD
Sbjct: 215 LERWYDPRHHAHDDVRARDEGMSFVKLGGWVGCMVNGAGLAMATMDLLNLAGLPAANFLD 274

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GG AD  ++  A +++     V+ + IN+FGGI+ C+ + + +   +   +   PLV+R
Sbjct: 275 LGGAADSRRLDRALRLLFEGRDVRVVFINLFGGILSCEKVAQALADVLAGNEPAKPLVVR 334

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + G     G RL+   GLN+     ++D  Q +
Sbjct: 335 MAGNGASEGRRLL--EGLNLHGLTLVEDMTQAL 365


>gi|259488488|tpe|CBF87961.1| TPA: succinyl-CoA synthetase subunit alpha, putative
           (AFU_orthologue; AFUA_1G10830) [Aspergillus nidulans
           FGSC A4]
          Length = 703

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 163/286 (56%), Gaps = 13/286 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAK-DYPQKIFKLLIDPLIGVTSEDVASLCD 175
           ++++SL +DRT+   A I ST  G +    A+  +P       I      +   + +   
Sbjct: 424 DVHISLTIDRTALSPALITSTSPGFEPSNSARLPFP------YIKEKFEASDSIITTAAT 477

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            L L   A      +   L++ F  ++  +LE+      + G   V  ++  FDD A   
Sbjct: 478 QLSLPTSAHGKLAGIVQALWQIFKQREAFVLEVRANYSAEGG-FEVRGARFGFDDAAFRS 536

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYG 290
             R  +I  LRDV EE   E+EA++  + Y+ L+G  +IG +VNGAGLAM T+D +  +G
Sbjct: 537 SGRQEEIHALRDVKEEVPEEVEAEKDGIVYVKLNGKGSIGTLVNGAGLAMNTVDALTHHG 596

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G+ ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++ +GI+ A ++++
Sbjct: 597 GSCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMIAEGIILAFRDMQ 656

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +++P+V+RL G N + G ++IAESGL +      +DAA+K++   K
Sbjct: 657 MSVPVVVRLRGTNEESGQQMIAESGLPLHAFDSFEDAAKKVIALAK 702


>gi|169781606|ref|XP_001825266.1| CoA-ligase [Aspergillus oryzae RIB40]
 gi|83774008|dbj|BAE64133.1| unnamed protein product [Aspergillus oryzae]
          Length = 688

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 162/288 (56%), Gaps = 15/288 (5%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           +++L+L VDRT+     IAST         +K +P   F           S  + S+   
Sbjct: 405 DIFLNLTVDRTALSPCVIASTSADFAPSHTSK-FP---FPYFNTDFSSSDSPIIKSIASH 460

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISFDDNALY 234
           L L         +L   L++ F +K+  LLE+  NP        L V  ++  FDD A  
Sbjct: 461 LHLPETTHETLAELVQALWQIFKEKEAYLLEVRVNP----STEGLEVRGARFGFDDAAFR 516

Query: 235 ---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLY 289
              R  ++  LR+ +EE   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + ++
Sbjct: 517 SSGRQKEVHSLRNPAEEVHEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVDALTIH 576

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++ +GI+ A +++
Sbjct: 577 GGHCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMIAEGIIMAFRDL 636

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            +++P+V+RL G N + G ++IAESGL +      + AA+K++    G
Sbjct: 637 DMSVPVVVRLRGTNEEEGQKMIAESGLPLHAFDSFEGAAKKVISLAGG 684


>gi|326479223|gb|EGE03233.1| succinyl-CoA synthetase subunit alpha [Trichophyton equinum CBS
           127.97]
          Length = 683

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 87/230 (37%), Positives = 138/230 (60%), Gaps = 6/230 (2%)

Query: 169 DVASLCDMLELQGQARIDGGD-LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
           D+AS+ D L        +  + L   +   F  K+  LLE+   I      + ++D++  
Sbjct: 450 DIASVKDTLGFTKHHPSETLEKLLHGMMNVFVTKEAFLLEVKVGIAPDTNDIHIIDARFG 509

Query: 228 FDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMAT 282
           FDD A     R  DI  LR+ ++E   E+EA++  + YI L  +G IG +VNGAGLAM T
Sbjct: 510 FDDAAHRSSGRQGDIHALRNKADEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAMNT 569

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           +D + L+GG+ ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +CD++ +GI
Sbjct: 570 VDALTLHGGSCANFLDTGGKATAETVKSSFRVILSDPRVKSIFVNIFGGLTKCDMIAEGI 629

Query: 343 LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + A +++ + +P+V+RL G N  +G ++IAESGL +      + AA+K +
Sbjct: 630 MMAFRDLGMKVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEQAAKKAI 679


>gi|67518053|ref|XP_658797.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4]
 gi|40746630|gb|EAA65786.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4]
          Length = 581

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 163/286 (56%), Gaps = 13/286 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAK-DYPQKIFKLLIDPLIGVTSEDVASLCD 175
           ++++SL +DRT+   A I ST  G +    A+  +P       I      +   + +   
Sbjct: 302 DVHISLTIDRTALSPALITSTSPGFEPSNSARLPFP------YIKEKFEASDSIITTAAT 355

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            L L   A      +   L++ F  ++  +LE+      + G   V  ++  FDD A   
Sbjct: 356 QLSLPTSAHGKLAGIVQALWQIFKQREAFVLEVRANYSAEGG-FEVRGARFGFDDAAFRS 414

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYG 290
             R  +I  LRDV EE   E+EA++  + Y+ L+G  +IG +VNGAGLAM T+D +  +G
Sbjct: 415 SGRQEEIHALRDVKEEVPEEVEAEKDGIVYVKLNGKGSIGTLVNGAGLAMNTVDALTHHG 474

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G+ ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++ +GI+ A ++++
Sbjct: 475 GSCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMIAEGIILAFRDMQ 534

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +++P+V+RL G N + G ++IAESGL +      +DAA+K++   K
Sbjct: 535 MSVPVVVRLRGTNEESGQQMIAESGLPLHAFDSFEDAAKKVIALAK 580


>gi|317153396|ref|YP_004121444.1| ATP-grasp domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943647|gb|ADU62698.1| ATP-grasp domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 692

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 28/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +KAL  K  +PV +G+ +    + E+ +     P +++K+Q   GGRGK    
Sbjct: 1   MLLNEHMSKALFNKAGIPVPQGLSVFP-GSEETVVPDFALP-WILKAQALTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV             R I G  +        G  V  + VE    I RE YL
Sbjct: 56  -------GGVLRVDDAHDFAPTARRIFGLNI-------QGHSVPFIRVEPAVIIDRECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL---IGVTSEDVASLCDML 177
           SL V R+ G +      +GG++IE   +        LL+  +    G+ +  + +    L
Sbjct: 102 SLSVSRSRGCILLTVGREGGVEIESGGRA------NLLVQEIHLPAGLAANQIRAAFFHL 155

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L      D   L    +KA  D  + L EINPL++  + R   LD K+  DDN    + 
Sbjct: 156 GLDKALFGDFSALLATFFKAMLDNGLLLAEINPLVLTGDNRFLALDGKVEVDDNFAELNP 215

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            ++           E  A+   LSY+ LDG +G MVNGAGLAMATMD++        NFL
Sbjct: 216 AMETYYQPEHASHEENVARAAGLSYVKLDGWVGLMVNGAGLAMATMDLLNFSRLPARNFL 275

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GG AD  ++  A +++  D+ V+ + IN++GGI+ C  +   +  A+ + + + P+V 
Sbjct: 276 DLGGAADHTRMRTALELLFGDARVRAVFINMYGGILSCRNVALALREALGDREPDKPIVA 335

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           R+ G +   G  ++   G + +       AA +I+  +K
Sbjct: 336 RMSGNDAAGGIEVLRAMGCDTVHIASDMQAAIRILETLK 374


>gi|213584707|ref|ZP_03366533.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 215

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 126/225 (56%), Gaps = 10/225 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGK 215


>gi|326474235|gb|EGD98244.1| succinyl-CoA synthetase subunit alpha [Trichophyton tonsurans CBS
           112818]
          Length = 620

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 87/230 (37%), Positives = 138/230 (60%), Gaps = 6/230 (2%)

Query: 169 DVASLCDMLELQGQARIDGGD-LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
           D+AS+ D L        +  + L   +   F  K+  LLE+   I      + ++D++  
Sbjct: 387 DIASVKDTLGFTKHHPSETLEKLLHGMMNVFVTKEAFLLEVKVGIAPDTNDIHIIDARFR 446

Query: 228 FDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMAT 282
           FDD A     R  DI  LR+ ++E   E+EA++  + YI L  +G IG +VNGAGLAM T
Sbjct: 447 FDDAAHRSSGRQGDIHALRNKADEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAMNT 506

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           +D + L+GG+ ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +CD++ +GI
Sbjct: 507 VDALTLHGGSCANFLDTGGKATAETVKSSFRVILSDPRVKSIFVNIFGGLTKCDMIAEGI 566

Query: 343 LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + A +++ + +P+V+RL G N  +G ++IAESGL +      + AA+K +
Sbjct: 567 MIAFRDLGMKVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEQAAKKAI 616


>gi|240276118|gb|EER39630.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H143]
          Length = 645

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 130/200 (65%), Gaps = 6/200 (3%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIE 254
           F +K+  LLE   +    +G  RV +++  FDD A     R  DI +LR++++E   E+E
Sbjct: 443 FINKEALLLETK-VSGRSDGSFRVTEARFGFDDAAYKGSKRQEDIHKLRNMAQEVPEEVE 501

Query: 255 AKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAF 312
           A++  + Y+ L  +G+IG +VNGAGLAM T+D + L+GG  ANFLD GG A  + V ++F
Sbjct: 502 AEKEGIVYVKLPGEGSIGTLVNGAGLAMNTVDALTLHGGHCANFLDTGGKATSETVKSSF 561

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIA 372
           +I+ SD  VK I +NIFGG+  CD++  GI+ A +++ + +P+V+RL G N ++G ++IA
Sbjct: 562 RIVLSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLDMKVPVVVRLRGTNEELGQKMIA 621

Query: 373 ESGLNVITAIDLDDAAQKIV 392
           +SGL +      ++AA K++
Sbjct: 622 DSGLPLHAFDSFEEAASKVI 641


>gi|157104413|ref|XP_001648398.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108880382|gb|EAT44607.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 214

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 133/208 (63%), Gaps = 8/208 (3%)

Query: 195 YKAFCDKDMSLLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQELRDVSEE- 248
           Y  F   + + +EINPL    +     G++  +D+K++FDDNA +   DI  + DV E+ 
Sbjct: 7   YYLFVKVEAAQIEINPLANRPDRNQSPGQVISVDAKLNFDDNAQFGQKDIFAM-DVHEDT 65

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMAT-MDIIKLYGGAPANFLDVGGGADQDK 307
           D +EIE  ++NL+YIA++GNIGC+VNGA       MDIIKL    P NFLD GG A + +
Sbjct: 66  DPKEIEIHKYNLNYIAMEGNIGCLVNGAVWPWPPYMDIIKLNDEIPVNFLDEGGNAKEKQ 125

Query: 308 VAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           V    +I+TSD +VK IL+NIFG I+    +  GI++A K + + +PLV+RL+G NVD  
Sbjct: 126 VLKTLQILTSDPNVKAILVNIFGEIVNFTTIADGIVNATKTIGLKVPLVVRLKGTNVDAA 185

Query: 368 NRLIAESGLNVITAIDLDDAAQKIVHAV 395
            +++ ESGL + +  +L++AA+K V  +
Sbjct: 186 KKILEESGLMIESVHELEEAAKKTVRVL 213


>gi|255937433|ref|XP_002559743.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584363|emb|CAP92398.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 676

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDS 250
           L++ + +K+   LE   L I  NG L V  ++  FDD A     R  DI +LRD +EE +
Sbjct: 468 LWEIYKEKEAFTLETQ-LAISANGTLEVHGARFGFDDAAFRSSGRQEDIHKLRDTAEEVA 526

Query: 251 REIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
            E+EA++  + Y+ L+G  +IG +VNGAGLAM T+D + ++GG  ANFLD GG A  + V
Sbjct: 527 EEVEAEKDGIVYVKLEGEGSIGTLVNGAGLAMNTVDALTIHGGHCANFLDTGGKATSETV 586

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
            A+F++I SD+ VK + +NIFGG+ RCD++ +GI+ A +++ + +P+V+RL G N ++G 
Sbjct: 587 KASFRVICSDTRVKAVFVNIFGGLTRCDMIAEGIILAFRDLNMKVPVVVRLRGTNEELGQ 646

Query: 369 RLIAESGLNVITAIDLDDAAQKIV 392
           ++IAESGL +      ++AA+K +
Sbjct: 647 KMIAESGLPLHAFDGFEEAAKKAI 670


>gi|121701827|ref|XP_001269178.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1]
 gi|119397321|gb|EAW07752.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1]
          Length = 679

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 157/279 (56%), Gaps = 14/279 (5%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLE 178
           LS+ VDRT+     IAS     D    A       F      P +  T   + ++   L 
Sbjct: 403 LSVTVDRTALSPCIIASGNPTSDPASSA------TFPFAYSTPELSSTHSAIEAVASHLN 456

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---R 235
           L   AR     L   L++ + +K+  +LE+   I   +  + V  +  +FDD A     R
Sbjct: 457 LPETARGGLAKLAQALWQIYKEKEAYVLEVR--INFASEDIEVRGAHFAFDDAAFRSSGR 514

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAP 293
             D+  LR+  EE   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + ++GG  
Sbjct: 515 QEDVHRLRNKEEEVPEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVDALSIHGGHC 574

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD GG A  + V ++F+II SD  VK I +NIFGG+ RCD++  GI+ A +++++ +
Sbjct: 575 ANFLDTGGKATSETVKSSFRIIRSDPRVKAIFVNIFGGLTRCDMIADGIIMAFRDLEMTV 634

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           P+V+RL G N +IG ++IA+SGL +      +DAA+K++
Sbjct: 635 PVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEDAAKKVI 673


>gi|225560012|gb|EEH08294.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus G186AR]
          Length = 648

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 131/208 (62%), Gaps = 9/208 (4%)

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEED 249
            L   F +K+  LLE   +    +G  RV +++  FDD A     R  DI +LR++++E 
Sbjct: 438 TLLDIFINKEALLLETK-VSRRSDGSFRVTEARFGFDDAAYKSSKRQEDIHKLRNMAQEV 496

Query: 250 SREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
             E+EA++  + Y+ +     +G+IG +VNGAGLAM T+D + L+GG  ANFLD GG A 
Sbjct: 497 PEEVEAEKEGIVYVKIFRLPGEGSIGTLVNGAGLAMNTVDALTLHGGHCANFLDTGGKAT 556

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
            + V ++F+I+ SD  VK I +NIFGG+  CD++  GI+ A +++ + +P+V+RL G N 
Sbjct: 557 SETVKSSFQIVLSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLDMKVPVVVRLRGTNE 616

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIV 392
           ++G ++IA+SGL +      ++AA K++
Sbjct: 617 ELGQKMIADSGLPLHAFDSFEEAASKVI 644


>gi|325090016|gb|EGC43326.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H88]
          Length = 648

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 130/203 (64%), Gaps = 9/203 (4%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIE 254
           F +K+  LLE   +    +G  RV +++  FDD A     R  DI +LR++++E   E+E
Sbjct: 443 FINKEALLLETK-VSGRSDGSFRVTEARFGFDDAAYKGSKRQEDIHKLRNMAQEVPEEVE 501

Query: 255 AKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
           A++  + Y+ +     +G+IG +VNGAGLAM T+D + L+GG  ANFLD GG A  + V 
Sbjct: 502 AEKEGIVYVKIFRLPGEGSIGTLVNGAGLAMNTVDALTLHGGHCANFLDTGGKATSETVK 561

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
           ++F+I+ SD  VK I +NIFGG+  CD++  GI+ A +++ + +P+V+RL G N ++G +
Sbjct: 562 SSFRIVLSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLDMKVPVVVRLRGTNEELGQK 621

Query: 370 LIAESGLNVITAIDLDDAAQKIV 392
           +IA+SGL +      ++AA K++
Sbjct: 622 MIADSGLPLHAFDSFEEAASKVI 644


>gi|78357377|ref|YP_388826.1| succinyl-CoA synthetase (ADP-forming) subunit alpha / succinyl-CoA
           synthetase (ADP-forming) subunit beta [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78219782|gb|ABB39131.1| succinyl-CoA synthetase (ADP-forming) alpha subunit / succinyl-CoA
           synthetase (ADP-forming) beta subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 700

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 182/383 (47%), Gaps = 45/383 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +K L  +  +    G +++    AE     +  P ++ K+Q+  GGRGK    
Sbjct: 1   MFLNEHMSKVLFAEAGIDTPAGDLLTPGQLAEY-TPAVSAPWFL-KAQVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++LK    ++RE     + T +    G RV  + +E   DI RE YL
Sbjct: 56  -------GGIRRAATLK----ELRET-AQDMFTMEI--KGHRVPFLRIESATDIRRECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP------------LIGVTSE 168
           S ++ R    +    S  GG+ +E         + ++ +D              +GV  E
Sbjct: 102 SFVLSRERRDLLLTTSRAGGIHVESSTGQQKPLVQRVPLDSGLREHHLRAAFFEMGVEKE 161

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
             A    M E               LY+A  +  + L EINPL++  +GR   LD K+  
Sbjct: 162 HWAGFKAMAE--------------KLYRAVREYGLLLAEINPLVLTCDGRWVALDGKVEL 207

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           DD+ +    D++           E  A++  LSY+ L G +G +VNGAGLAMATMD++  
Sbjct: 208 DDSVVDLQPDLERFYTPEHHSREENLAREAGLSYVELKGWVGILVNGAGLAMATMDLLNF 267

Query: 289 YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
            G + ANF+D+GG AD  ++  A  ++  + +V+ + IN+FGGI+ C  + + ++ A++ 
Sbjct: 268 SGLSAANFMDLGGAADASRMRRALDLLFENRNVRAVFINLFGGIVSCADVARALVDALEG 327

Query: 349 VKINIPLVMRLEGANVDIGNRLI 371
                P+V+R+ G     G  L+
Sbjct: 328 GDAPKPIVVRMAGHESAEGRALL 350


>gi|85857865|ref|YP_460067.1| succinyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB]
 gi|85720956|gb|ABC75899.1| succinyl-CoA synthetase beta chain [Syntrophus aciditrophicus SB]
          Length = 380

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 196/397 (49%), Gaps = 22/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+A  +  +  +PV +  V S++H A      +  P+ ++K+Q+  GGRG     
Sbjct: 1   MRLHEYEALDIFERNGIPVPRRGVASTMHEALRVAGEIGYPV-ILKAQVLVGGRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELY 119
                  GG++  SS      +++E+  + L +   G P    + C  VE    + +ELY
Sbjct: 57  -------GGIKTASSP----DELKEVAEALLSSDVKGLPVLKLLVCEKVE----VAKELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE- 178
           + + +D  SG    +AST+GGM IEE A+  P+KI  + +D  +        ++   L  
Sbjct: 102 VGITIDGYSGKPVIVASTEGGMLIEETARTSPEKIAAIHVDSSLEFYPYQARTMLGRLSG 161

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           +  Q      D+   LY      +  + EINPL+++ NG L  +D+ +  DD+A+ R   
Sbjct: 162 INQQLLTSWTDVIGQLYNVVMRYEPLICEINPLVVLPNGGLIAVDAVLEVDDSAISRVRF 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
               R    E+  E   ++  ++Y+ LDG+IG + +GAGL MA+ DII      PANFL+
Sbjct: 222 PLPDRVERIENPLERRGREIGVTYVDLDGDIGLISSGAGLGMASTDIIGERM-KPANFLE 280

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGG   D +    ++I     ++ + IN++GGI       KG++  ++E  + IP+V +
Sbjct: 281 TGGGITADLLYKCMELIMMKPGLRAVFINVYGGINPIHEGAKGVVRYIQEHNVKIPIVAK 340

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             G   +    +   +G++V+T    + A  ++   V
Sbjct: 341 ALGNRQEETWEIFRSAGVHVVTEAATEKAIDRLYELV 377


>gi|89893728|ref|YP_517215.1| hypothetical protein DSY0982 [Desulfitobacterium hafniense Y51]
 gi|219668103|ref|YP_002458538.1| succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
 gi|89333176|dbj|BAE82771.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538363|gb|ACL20102.1| Succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
          Length = 390

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 207/399 (51%), Gaps = 26/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+AK +  KY +P+ +  + ++   A      +  P+ VVK+Q+ AGGRGK    
Sbjct: 1   MYLYEYEAKEVFSKYGIPLGQNGIATNPAEAGMICAGIGKPV-VVKAQVMAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G +   +  ++      +ILG           G +V  + +E+  +I RE+Y 
Sbjct: 57  -------GLILPAADPEAAAKAAAQILGKE-------HHGEQVKKLLIEEQIEIAREVYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D T G    + S QGGM+IE +A   P+ + K  IDP   V    +  L      +
Sbjct: 103 SITMDFTEGKPVMMVSAQGGMEIESLAAANPELLIKEHIDPWREVFGHRLRDLWRRAGFR 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G   ++  ++   L + F + D    EINPL++ + G++   D+K+  DD A +R    +
Sbjct: 163 GGQVVELENILGRLVRVFLETDALTAEINPLVMTQEGKIIAADAKLILDDEASFRS---E 219

Query: 241 ELRDVSEEDSREIEAKQH--NLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +R+ S  +   +E +    N++Y++++  G+IG +  GAGL+MATMD +   G  PA F
Sbjct: 220 IIRNASRPEINPLEKRAGDLNVTYVSIEEGGDIGIIAGGAGLSMATMDAVYGIGAKPAAF 279

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           +D+GGG  ++++  +  ++T   +++GI+IN+FGGI  C  +  G+   + E   ++ +V
Sbjct: 280 IDLGGGISRERMKESLLLMTETPNLRGIIINVFGGINNCLTMAAGLADFLDEKPTDVKIV 339

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +++ G   + G R++   G+  +   +  D A +++  V
Sbjct: 340 VKMRGHEQEEGWRILERYGIPTVK-FETTDVAIRLLMQV 377


>gi|325919054|ref|ZP_08181115.1| succinyl-CoA synthetase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550490|gb|EGD21283.1| succinyl-CoA synthetase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 222

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 10/232 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A  A  +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEAANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNA 222


>gi|119184194|ref|XP_001243025.1| hypothetical protein CIMG_06921 [Coccidioides immitis RS]
          Length = 467

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 153/281 (54%), Gaps = 11/281 (3%)

Query: 118 LYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +L + +DRT+   +FIAS T       E AK +P +  K          S ++ ++   
Sbjct: 187 FFLGVSIDRTAHSPSFIASPTIDAKRYIESAKKFPFEYGKREFS----ANSAEIQAIAAH 242

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           + L    +     L   L   F  K+   LE   + +   G L V  ++  FDD A    
Sbjct: 243 VGLAEPVQKSLSTLLEALTDIFMTKEAFSLETK-VAVSSAGALEVQGARFGFDDAAYRSA 301

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYGG 291
            R  DI +LR+   E   E+EA++  + Y+ L+G   IG +VNGAGLAM T+D + + GG
Sbjct: 302 KRQEDIHKLRNKELEVPEEVEAEKDGIVYVRLEGEGTIGTLVNGAGLAMNTVDALTIRGG 361

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
             ANFLD GG A  + V +AFKII SD  VK I +NIFGG+ R +++ +GI+ A +++ +
Sbjct: 362 HCANFLDTGGKATSETVKSAFKIILSDPRVKAIFVNIFGGLTRSEMIAEGIIMAFRDLGM 421

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            +P+V+RL G N ++G ++IAES L +      ++AA K++
Sbjct: 422 KVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFEEAAAKVI 462


>gi|296816593|ref|XP_002848633.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480]
 gi|238839086|gb|EEQ28748.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480]
          Length = 664

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 33/282 (11%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E  L+L +DR S       S+    +  +   +Y  + F             D+AS+ D 
Sbjct: 403 EFTLALAIDRKSCGPCINISSGANGNTHKFPFNYHTRNF-------------DIASIADT 449

Query: 177 LEL---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
           L+       A     DL   L   F  K+  LLE+   +      + VLD++  FDD A 
Sbjct: 450 LDFAKYHPSATKSLEDLLHKLMNIFVSKEAFLLEVKVRLTQDTNDVHVLDARFGFDDAAY 509

Query: 234 Y---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
               R  DI  LR+ ++E   E+EA++               VNGAGLAM T+D + L+G
Sbjct: 510 RSSGRQGDIHALRNKADEVPAEVEAEKD--------------VNGAGLAMNTVDALTLHG 555

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G+ ANFLD GG A  + V ++F++I SD+ VK I +NIFGG+ RCD++ +GI+ A +++ 
Sbjct: 556 GSCANFLDTGGKATAETVKSSFRVILSDTRVKSIFVNIFGGLTRCDMIAEGIIMAFRDLG 615

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + +P+V+RL G N  +G ++IAESGL +      + AA+K +
Sbjct: 616 MKVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEHAAKKAI 657


>gi|258568988|ref|XP_002585238.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704]
 gi|237906684|gb|EEP81085.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704]
          Length = 486

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 159/293 (54%), Gaps = 22/293 (7%)

Query: 110 DGADILRELYLSLLVDRTSGMVAFIAS-----TQGGMDIEEVAKDYPQKIFKLLIDPLIG 164
           +GAD     +L + +DRT+   + IAS     TQ     ++    Y +K F         
Sbjct: 201 NGADAF---FLGISIDRTAHSASVIASPSAEPTQHLSSTKKFPFGYGKKKFP-------- 249

Query: 165 VTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
             S ++ ++   + L G A+     L   L   F  K+   LE   + I   G L V  +
Sbjct: 250 ANSPEIQAIAAHVGLAGSAQKSLAGLTEALVDIFMTKEAFSLEAK-VAITGAGTLEVQGA 308

Query: 225 KISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLA 279
           +  FDD A     R  DI +LR+   E   E+EA++  + Y+ L+G  +IG +VNGAGLA
Sbjct: 309 RFGFDDAAYRSARRQEDIHKLRNKQLEVPEEVEAEKDGIVYVKLEGEGSIGTLVNGAGLA 368

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           M T+D + + GG  ANFLD GG A  + V +AF+I+ SD  VK I +NIFGG+ R +++ 
Sbjct: 369 MNTVDALTIRGGHCANFLDTGGKATSETVKSAFRILLSDPRVKAIFVNIFGGLTRSEMIA 428

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +GI+ A +++ + +P+V+RL G N ++G ++IAES L +      ++A+ KI+
Sbjct: 429 EGIIMAFRDLGMKVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFEEASAKII 481


>gi|320031967|gb|EFW13924.1| succinyl-CoA synthetase, alpha subunit [Coccidioides posadasii str.
           Silveira]
          Length = 712

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 152/281 (54%), Gaps = 11/281 (3%)

Query: 118 LYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +L   +DRT+   +FIAS T       E AK +P +  K          S ++ ++   
Sbjct: 432 FFLGASIDRTAHSPSFIASPTIDAKRYIESAKIFPFEYGKREFS----ANSAEIQAIAAH 487

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           + L    +     L   L   F  K+   LE   + +   G L V  ++  FDD A    
Sbjct: 488 VGLAEPVQKSLSTLLEALTDIFMTKEAFSLETK-VAVSSGGVLEVQGARFGFDDAAYRSA 546

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYGG 291
            R  DI +LR+   E   E+EA++  + Y+ L+G   IG +VNGAGLAM T+D + + GG
Sbjct: 547 KRQEDIHKLRNKELEVPEEVEAEKDGIVYVRLEGEGTIGTLVNGAGLAMNTVDALTIRGG 606

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
             ANFLD GG A  + V +AFKII SD  VK I +NIFGG+ R +++ +GI+ A +++ +
Sbjct: 607 HCANFLDTGGKATSETVKSAFKIILSDPRVKAIFVNIFGGLTRSEMIAEGIIMAFRDLGM 666

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            +P+V+RL G N ++G ++IAES L +      ++AA K++
Sbjct: 667 KVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFEEAAAKVI 707


>gi|303320235|ref|XP_003070117.1| succinyl-CoA synthetase beta chain, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109803|gb|EER27972.1| succinyl-CoA synthetase beta chain, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 712

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 151/281 (53%), Gaps = 11/281 (3%)

Query: 118 LYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +L   +DRT+   +FIAS T       E AK +P +  K          S ++ ++   
Sbjct: 432 FFLGASIDRTAHSPSFIASPTIDAKRYIESAKIFPFEYGKREFS----ANSAEIQAIAAH 487

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           + L    +     L   L   F  K+   LE   + +   G L V  ++  FDD A    
Sbjct: 488 VGLAEPVQKSLSTLLEALTDIFMTKEAFSLETK-VAVSSAGVLEVQGARFGFDDAAYRSA 546

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYGG 291
            R  DI +LR+   E   E+EA++  + Y+ L+G   IG +VNGAGLAM T+D + + GG
Sbjct: 547 KRQEDIHKLRNKELEVPEEVEAEKDGIVYVRLEGEGTIGTLVNGAGLAMNTVDALTIRGG 606

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
             ANFLD GG A  + V +AFKII SD  VK I +NIFGG+ R +++ +GI+ A +++ +
Sbjct: 607 HCANFLDTGGKATSETVKSAFKIILSDPRVKAIFVNIFGGLTRSEMIAEGIIMAFRDLGM 666

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            +P+V+RL G N ++G ++IAES L +       +AA K++
Sbjct: 667 KVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFKEAAAKVI 707


>gi|302497886|ref|XP_003010942.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291174488|gb|EFE30302.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 510

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 143/236 (60%), Gaps = 8/236 (3%)

Query: 169 DVASLCDMLEL---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           D+AS+ D L L      A      L   L   F  K+  LLE+   I      ++++D++
Sbjct: 275 DIASVKDTLGLTKYHPMATESLEKLLHGLMNIFVTKEAFLLEVKAGIAPDAKDIQIIDAR 334

Query: 226 ISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAM 280
             FDD A     R  DI  LR+ +EE   E+EA++  + YI L  +G IG +VNGAGLAM
Sbjct: 335 FGFDDAAYRSSGRQGDIHVLRNKAEEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAM 394

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK 340
            T+D + L+GG+ ANFLD GG A  + V ++F++I SD  VKGI +NIFGG+ +CD++ +
Sbjct: 395 NTVDALTLHGGSCANFLDTGGKATAETVKSSFRVILSDPRVKGIFVNIFGGLTKCDMIAE 454

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           GI+ A +++ + +P+V+RL G N ++G ++IAESGL +      + AA+K++   K
Sbjct: 455 GIMMAFRDLGMKVPVVVRLRGTNEELGQKMIAESGLPLHAFDSFEQAAKKVISLSK 510


>gi|303246553|ref|ZP_07332832.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ]
 gi|302492263|gb|EFL52138.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ]
          Length = 703

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 187/393 (47%), Gaps = 32/393 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+  K LL +  + V  G+       A   +K      Y +K+Q  +GGRGK    
Sbjct: 1   MHLTEHAGKTLLAEAGIAVPPGLAFEPGDVA--GLKPPFAAPYYLKAQTLSGGRGK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGST--LITKQTG---PTGSRVNCVYVEDGADIL 115
                + G VR+ES+         E+ G+   L ++  G   P   R+      D     
Sbjct: 55  -----AGGVVRLESA--------GELPGAAEALFSRPCGGVVPPFLRLEPAVAHD----- 96

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           R LY+SL V R    +    + QGG+D+E +A     ++  L + P    T   V     
Sbjct: 97  RALYISLGVSRDLRSLCLTLARQGGVDVEGLAGT--PELLVLPVAPPFVPTPRLVRRAFF 154

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
              L  +       L   L+ A  D  + L EINPL +  +GR   LD+K+  DD+A   
Sbjct: 155 HFGLARECYAAFAGLIERLFAAVNDYGLLLAEINPLAVTPDGRFVALDAKVVIDDSASRI 214

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
              +    D       E  A+ H LS+++L G+IG + NGAGLAMATMD +   G A AN
Sbjct: 215 IPKLARFGDDRLATPTERLARDHGLSFVSLSGHIGLVANGAGLAMATMDALDAAGLAAAN 274

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GG AD  ++ AAF +I ++  V    +N+FGGI+ C  + K +L A+ +   + P+
Sbjct: 275 FLDFGGTADAARLRAAFDLIFAEPRVAACCVNMFGGILSCADVAKALLEALGDASPSRPI 334

Query: 356 VMRLEGANVDIGNRLIAESGLN-VITAIDLDDA 387
           V+R  G   ++G  L+   GL  ++ A D+D A
Sbjct: 335 VVRFAGNGAEMGAALLRRQGLPALLVADDMDQA 367


>gi|225679646|gb|EEH17930.1| succinyl-CoA synthetase beta chain [Paracoccidioides brasiliensis
           Pb03]
          Length = 694

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 157/283 (55%), Gaps = 13/283 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIAS--TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           + +  L +DR S     IAS  T     + + A+ +P    K       G  +  VAS  
Sbjct: 414 DFFFGLSIDRKSHSPCIIASPTTDPATQLSQ-ARVFPFTYGKTQFS-ADGANTRAVASHI 471

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            + E    A      L  NL   F  K+  +LE   + +  +G  +V  ++  FDD A  
Sbjct: 472 GLGEF---ALTPLAKLAQNLLDIFMSKEAFVLETK-ITVASDGSFQVSGARFGFDDAAYK 527

Query: 235 ---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLY 289
              R  DI  LR+ +EE   E+EA+++ + YI LDG  +IG +VNGAGLAM T+D +  +
Sbjct: 528 SSKRQEDIHRLRNEAEEVPEEVEAEKYGIVYIKLDGEGSIGTLVNGAGLAMNTVDALSHH 587

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+  CD++  GI+ A +++
Sbjct: 588 GGHCANFLDTGGKATSETVKSSFRIILSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDL 647

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            + +P+V+RL G N +IG ++IA+SGL +      ++AA+K++
Sbjct: 648 DMKVPVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEEAAKKVI 690


>gi|167933006|ref|ZP_02520093.1| succinyl-CoA synthetase, beta subunit [candidate division TM7
           single-cell isolate TM7b]
          Length = 285

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 169/333 (50%), Gaps = 57/333 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK LL    +P+ +G V      A + ++ +  P+ V+KSQ+  GGRGK    
Sbjct: 1   MRLLEYEAKNLLSACGMPIPRGKVF-----AVNELQAIAAPI-VLKSQVPIGGRGK---- 50

Query: 61  ELPADSKGGVRV---ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                  GGV++   +S L+SV   +  +       K  G   S++     E+  DI RE
Sbjct: 51  ------LGGVQIVRHQSDLESVARKMFNL-------KIKGFLPSKL---LAEEILDISRE 94

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEE------VAKDYPQKIFKLLIDPLIGVTSEDVA 171
            Y SL ++R +  +  +A T GG++IE         +D   + F+ L D L      D+A
Sbjct: 95  FYFSLNINRQTAGIELLAHTSGGVEIESQDTADFFRRDIVNEKFEALADELADYL--DIA 152

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
               +L+          D+  N Y+ F D D  LLEINPLI+ K+ +L   D+KI+ DD 
Sbjct: 153 DKTFLLQ----------DIIENAYRCFIDNDCLLLEINPLILTKDSKLIAGDAKITVDDA 202

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +RHLD +      E++S E     HN   +  DG +  + NGAGLAM T+D +   G 
Sbjct: 203 AAFRHLDWR-----FEDNSTE-----HNFIILNRDGAVATIANGAGLAMTTVDAVTASGL 252

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
            PANFLD+GG A  DKV   F+ IT+  ++K I
Sbjct: 253 KPANFLDIGGTATSDKVLDCFRQITTLDNIKVI 285


>gi|226291384|gb|EEH46812.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb18]
          Length = 664

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 157/283 (55%), Gaps = 13/283 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIAS--TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           + +  L +DR S     IAS  T     + + A+ +P    K       G  +  VAS  
Sbjct: 384 DFFFGLSIDRKSHSPCIIASPTTDPATQLSQ-ARVFPFTYGKTQFS-ADGANTRAVASHI 441

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            + E    A      L  NL   F  K+  +LE   + +  +G  +V  ++  FDD A  
Sbjct: 442 GLGEF---ALTPLAKLAQNLLDIFMSKEAFVLETK-ITVASDGSFQVSGARFGFDDAAYK 497

Query: 235 ---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLY 289
              R  DI  LR+ +EE   E+EA+++ + YI LDG  +IG +VNGAGLAM T+D +  +
Sbjct: 498 SSKRQEDIHRLRNEAEEVPEEVEAEKYGIVYIKLDGEGSIGTLVNGAGLAMNTVDALSHH 557

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+  CD++  GI+ A +++
Sbjct: 558 GGHCANFLDTGGKATSETVKSSFRIILSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDL 617

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            + +P+V+RL G N +IG ++IA+SGL +      ++AA+K++
Sbjct: 618 DMKVPVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEEAAKKVI 660


>gi|238498400|ref|XP_002380435.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
 gi|220693709|gb|EED50054.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
          Length = 655

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 150/264 (56%), Gaps = 15/264 (5%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           +++L+L VDRT+     IAST         +K +P   F           S  + S+   
Sbjct: 396 DIFLNLTVDRTALSPCVIASTSADFAPSHTSK-FP---FPYFNTDFSSSDSPIIKSIASH 451

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISFDDNALY 234
           L L         +L   L++ F +K+  LLE+  NP        L V  ++  FDD A  
Sbjct: 452 LHLPETTHETLAELVQALWQIFKEKEAYLLEVRVNP----STEGLEVRGARFGFDDAAFR 507

Query: 235 ---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLY 289
              R  ++  LR+ +EE   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + ++
Sbjct: 508 SSGRQKEVHSLRNPAEEVHEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVDALTIH 567

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++ +GI+ A +++
Sbjct: 568 GGHCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMIAEGIIMAFRDL 627

Query: 350 KINIPLVMRLEGANVDIGNRLIAE 373
            +++P+V+RL G N + G ++++E
Sbjct: 628 DMSVPVVVRLRGTNEEEGQKMVSE 651


>gi|295667892|ref|XP_002794495.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis
           Pb01]
 gi|226285911|gb|EEH41477.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis
           Pb01]
          Length = 670

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 130/205 (63%), Gaps = 6/205 (2%)

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEED 249
           NL   F  K+  +LE   + +  +G  +V  ++  FDD A     R  DI  LR+ +EE 
Sbjct: 463 NLLDIFMSKEAFVLETK-ITVASDGSFQVSGARFGFDDAAYKSSKRQKDIHRLRNEAEEV 521

Query: 250 SREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDK 307
             E+EA+++ + YI LDG  +IG +VNGAGLAM T+D +  +GG  ANFLD GG A  + 
Sbjct: 522 PEEVEAEKYGIVYIKLDGEGSIGTLVNGAGLAMNTVDALSHHGGHCANFLDTGGKATSET 581

Query: 308 VAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           V ++F+II SD  VK I +NIFGG+  CD++  GI+ A +++ + +P+V+RL G N +IG
Sbjct: 582 VKSSFRIILSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLDMKVPVVVRLRGTNEEIG 641

Query: 368 NRLIAESGLNVITAIDLDDAAQKIV 392
            ++IA+SGL +      ++AA+K++
Sbjct: 642 QKMIADSGLPLHAFDSFEEAAKKVI 666


>gi|70935244|ref|XP_738734.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56515189|emb|CAH87192.1| hypothetical protein PC302362.00.0 [Plasmodium chabaudi chabaudi]
          Length = 287

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 135/243 (55%), Gaps = 6/243 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +   AE     L         V+K+QI +GGRG 
Sbjct: 46  LSIHEYLSIDLLRNNNIPCPQGYHAQTPEEAEEKALELQNACGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPEGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE+++K  P+ I+K+ I+   G+T+      C+ 
Sbjct: 164 ERYVAFLLDRNSDNICLLGSSVGGSSIEDISKKTPEAIYKININIKDGLTNGQSREFCEQ 223

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +G       D+  NLYK F   D +LLEINPL    +GR+   D+K++FDDNA YR 
Sbjct: 224 IGFKGNELDIATDMLVNLYKIFKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEYRQ 283

Query: 237 LDI 239
            +I
Sbjct: 284 KEI 286


>gi|150021735|ref|YP_001307089.1| succinate--CoA ligase (ADP-forming) [Thermosipho melanesiensis
           BI429]
 gi|149794256|gb|ABR31704.1| Succinate--CoA ligase (ADP-forming) [Thermosipho melanesiensis
           BI429]
          Length = 338

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 187/380 (49%), Gaps = 57/380 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M I+E+  K L +++ V + +G +++S    E  IK LP    V+KSQ+  GGR K    
Sbjct: 1   MKIYEFVGKQLFKEHGVKIPEGYLVTS--KDELTIKFLPA---VLKSQVLVGGRMKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   ++ +          G+ L+ K     G +   + +E   +I RE YL
Sbjct: 53  -------GGILFANNQREFYD-----YGNILLKKNI--KGEKPYGILIEKMINIKREYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D+       + S  GG++IEE A            D +I +  +    L       
Sbjct: 99  SMYIDKLEKDFMILFSEYGGINIEENA------------DKVIKINFDKYKVLPKKFH-- 144

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK   +KD++L+EINPL    NG L  LD+ +  DDN+++R     
Sbjct: 145 --------KIILTLYKLMKEKDLTLIEINPLAETLNGDLIALDAVLHLDDNSIFR----- 191

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 ++ +++  ++     ++ L+G+IG +  GAG+ MATMD +  YGG PANFLD+G
Sbjct: 192 ------QKWAKQFSSETQPFHFVKLNGDIGIIGCGAGIVMATMDAVTFYGGKPANFLDLG 245

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD      A + +  + S+  I++NIFGGI +CD + + I+   K+    I L +RL 
Sbjct: 246 GGADTKTTTLALEYL-KNLSINKIIMNIFGGITKCDEIAQAIVR-FKQKNPQISLYVRLT 303

Query: 361 GANVDIGNRLIAESGLNVIT 380
           G N +I  +++ +  + + +
Sbjct: 304 GTNEEIAKQILKKYNIELFS 323


>gi|116180274|ref|XP_001219986.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51]
 gi|88185062|gb|EAQ92530.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51]
          Length = 636

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/293 (37%), Positives = 155/293 (52%), Gaps = 32/293 (10%)

Query: 94  KQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQ 152
           +QTG    ++NC     GA  L    L + +DRT+     IAS T     + E  + YP 
Sbjct: 344 RQTG----KINCDTAASGAQKL----LGISIDRTARSPCIIASPTAEETSLNESVERYP- 394

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA----FCDKDMSLLEI 208
             F    D L  +  E VA       LQ      G     +L KA    F DK+   L  
Sbjct: 395 --FDYGSD-LDALVIEQVAR-----HLQLSPGESGVKSLRHLLKALTAIFYDKEAFFLST 446

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +  I+  +G L V+ ++  FDD A     R  ++Q+LR+++ ED  EIEA+++ + YI L
Sbjct: 447 S--IVENSGELMVVGARFGFDDAAYRSCGRQAELQQLRNIAAEDPCEIEAEKNCIVYIKL 504

Query: 266 --DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
              G IG +VNGAGLAM T+D +    G  ANFLD GG A    V  +F+II  D  V+ 
Sbjct: 505 KGPGTIGTLVNGAGLAMNTVDAL---AGHAANFLDTGGKATSQTVKQSFEIILRDPRVRV 561

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           I +NIFGG+   D++ +GI+ A KE+  ++P+V+R+ G N   G RLI+ESGL
Sbjct: 562 IFVNIFGGLTLGDMIARGIIMAFKELSPSVPVVVRIRGTNERKGQRLISESGL 614


>gi|154250057|ref|YP_001410882.1| succinate--CoA ligase (ADP-forming) [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153993|gb|ABS61225.1| Succinate--CoA ligase (ADP-forming) [Fervidobacterium nodosum
           Rt17-B1]
          Length = 355

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 190/387 (49%), Gaps = 58/387 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISS--VHAAESAIKTLP-GPLYVVKSQIHAGGRGKG 57
           M I EY  K LL ++   V + + +    + + E   K L  G   V+KSQ+  GGR K 
Sbjct: 1   MKIQEYVGKRLLSEHGFYVPRSLFVKEEDIDSKELTQKILELGFPQVLKSQVLVGGRMKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  +L+  +  +RE++   +  K   P G     V +E+     +E
Sbjct: 61  ----------GGVIIAKNLEESMRALRELVNKEI--KGEMPEG-----VLIEEFVKHDKE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM- 176
           LY  + +DRT+  +  I S  GG+DIEE ++ +P K+ K               S  D+ 
Sbjct: 104 LYFGITIDRTNRNILMIYSEFGGVDIEEASRMFPNKVLK-------------TYSFNDLP 150

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            E +  A++        L   F   D++LLEINP+ + K+G + +LD+ +  DDNAL+R 
Sbjct: 151 EEFKETAKV--------LLDIFKKLDLTLLEINPIGVTKSGYV-MLDAVMHVDDNALFRQ 201

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E  +  E D             + L G+ G +  GAG+ MAT+D++K +G  PANF
Sbjct: 202 SWAMEQMNEREND------------MVLLGGSYGVIGCGAGIVMATIDMLKEFGFEPANF 249

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
            DVGGGA ++ V  A K ++  S  K I++NIFGGI  C  + + I+   KE   ++ L 
Sbjct: 250 YDVGGGATRENVLEALKKVSRIS--KKIVLNIFGGITDCFQVAEAIV-LFKERHPDVELF 306

Query: 357 MRLEGANVDIGNRLIAESGLNVITAID 383
           +R+ G   +    L++  GL  ++ ++
Sbjct: 307 LRISGNKEEEARALLSNIGLTAVSDMN 333


>gi|46127045|ref|XP_388076.1| hypothetical protein FG07900.1 [Gibberella zeae PH-1]
          Length = 577

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 159/303 (52%), Gaps = 14/303 (4%)

Query: 105 CVYVEDGADILRELYLSLLVDRTSGMVAFI-------ASTQGGMDIEEVAKDYPQKIFKL 157
            VY ++  D+ +  +L++ +DR                +T+G  + E   K+Y   +F L
Sbjct: 25  TVYFQEELDLHKHWHLTMTIDRKDCRPVIKIRDAKPDNNTRGAPEGELFQKNY---LFDL 81

Query: 158 LIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
             D      ++ +  +   L L   AR         L K F +     LE++ ++  +N 
Sbjct: 82  S-DTDSEFMTKTIQKIASELGLVSAARQGFQQGLIALRKIFMEAQAIFLEVD-VLRQRNS 139

Query: 218 RLRVLDSKISFDDNALYRHLDIQ-ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGA 276
           ++   +S+  FDD+A  +  ++   L +   ED  E+ A+   L Y+ ++G+IG +VNGA
Sbjct: 140 KIVFANSRFCFDDDAKKKARNVYLPLWEPLMEDEAELYAETFGLVYVKMNGDIGTVVNGA 199

Query: 277 GLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD 336
           GLAMAT D I ++GG  ANFLD GG A  D +  AFKI+  D  VK I +NI+GGI RCD
Sbjct: 200 GLAMATNDAICVHGGKSANFLDAGGQATNDTMKRAFKIVMDDRRVKIIFVNIYGGITRCD 259

Query: 337 VLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           ++ + I+ AV  +   ++P+V+RL+G N + G +L+ ++ L +    D D A +K V   
Sbjct: 260 MIAESIIDAVNSLGHQSVPMVVRLQGTNSEEGLKLLEDANLGIHVEADFDKATKKAVELA 319

Query: 396 KGV 398
           + +
Sbjct: 320 ESI 322


>gi|76156544|gb|AAX27731.2| SJCHGC05155 protein [Schistosoma japonicum]
          Length = 243

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 124/231 (53%), Gaps = 5/231 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q K L+  Y V V K +V+ +      A        YV+K+QI AGGRG G F+
Sbjct: 16  INLQEFQCKELMSNYGVNVQKFIVVRNPSEVNLAKNNFIVEEYVIKAQIPAGGRGMGVFR 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV +      +   + ++LG+ LITKQT  +G  V+ V V +  DI RE Y 
Sbjct: 76  D---GFKGGVHLTKDPNEMAHIVMKMLGNHLITKQTTSSGILVSQVMVAEALDIRRETYF 132

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     IA +QGGMDIEE+AK  P  I K  I+  IGVT E      + L   
Sbjct: 133 AILMDRISNSPIMIACSQGGMDIEELAKHCPSTIIKESINVTIGVTDEQACRFANALGFT 192

Query: 181 GQARI--DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            Q ++  +      NLYK F   D   +EINP    K+G++   D+K++FD
Sbjct: 193 PQTKLYEETCKQIRNLYKMFTALDCVQIEINPFGETKDGQIVCFDAKLAFD 243


>gi|205373358|ref|ZP_03226162.1| succinyl-CoA synthetase subunit beta [Bacillus coahuilensis m4-4]
          Length = 145

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 97/155 (62%), Gaps = 10/155 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRK+ V V  G V  +V  A  A K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKHGVAVPNGTVAYTVEEAVEAAKGLDSNVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYSEEILGKTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF 155
            L++DR +  V  +AS +GG +IEEVA++ P+KI 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEETPEKIL 145


>gi|289803981|ref|ZP_06534610.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 192

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 115/192 (59%)

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           ++V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL  +VDR+S 
Sbjct: 1   MKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSR 60

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+G+       
Sbjct: 61  RVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTK 120

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++E+RD S+ED
Sbjct: 121 IFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQED 180

Query: 250 SREIEAKQHNLS 261
            RE +A Q  L+
Sbjct: 181 PREAQAAQWELN 192


>gi|56753963|gb|AAW25174.1| SJCHGC06370 protein [Schistosoma japonicum]
          Length = 180

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 98/139 (70%), Gaps = 1/139 (0%)

Query: 252 EIEAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           E +A  + L+YI L DGNIGC+VNGAGLAMATMD+I  + G PANFLD+GG   + +V  
Sbjct: 22  EADAAHNGLNYIGLNDGNIGCIVNGAGLAMATMDLIHYHHGKPANFLDLGGSVTRSQVEK 81

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AF ++   SS+  IL+NIFGGI+ C ++ +G+LSA+K   INIP+V+RLEG +      L
Sbjct: 82  AFCLLARHSSINCILVNIFGGIVNCKIIAEGLLSALKNNIINIPVVVRLEGNSAVEAQSL 141

Query: 371 IAESGLNVITAIDLDDAAQ 389
           I+  GL++I A  L++AA 
Sbjct: 142 ISNCGLDLIAATSLEEAAS 160


>gi|171687991|ref|XP_001908936.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943957|emb|CAP69609.1| unnamed protein product [Podospora anserina S mat+]
          Length = 634

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 10/208 (4%)

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVS 246
           L   L   F +K+  L+E    I+ + G ++V+ ++  FDD A     R  ++Q+LR+ +
Sbjct: 427 LVHRLSDIFYEKEAYLMETE--IVERLGEIKVVGARFGFDDAAYRSCGRQTELQKLRNTA 484

Query: 247 EEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
            ED+ E+EA++  + YI L+GN  IG +VNGAGLAM T+D +   GG   NFLD GG A 
Sbjct: 485 VEDASELEAEKSGIIYIKLEGNGTIGTLVNGAGLAMNTVDAL---GGHATNFLDTGGKAT 541

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
            + V   F++I  D  V+ I +NIFGG+   D++  GI+ A KE+   +P+V+R+ G N 
Sbjct: 542 SETVKHGFEVILKDPRVRVIFVNIFGGLTLGDMIANGIIMAFKELSPRVPVVVRIRGTNE 601

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIV 392
             G +LI ESGL +    D + A  K +
Sbjct: 602 KEGQKLIEESGLPLYAFDDFEAAKAKAI 629


>gi|283853552|ref|ZP_06370791.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B]
 gi|283571051|gb|EFC19072.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B]
          Length = 704

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 184/388 (47%), Gaps = 22/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+  KAL  +  +    G+ +    AA   +     P Y+ K+Q  +GGRGK    
Sbjct: 1   MLLTEHAGKALFAEAGIETPPGLALGPGEAA-GFVPPFAAPWYL-KAQTLSGGRGK---- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                + G VR++    + +    E L    +  QT P   R+  V   D     R +YL
Sbjct: 55  -----AGGVVRLDD--PAGLEAAAEGLFGLSLGGQT-PPFLRLEPVVPFD-----RAVYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL V R    +    + QGG+D+E +A    +++  L + P   +T     +    L L+
Sbjct: 102 SLGVSRERKALCLTVARQGGVDVEGLAGS--EELLVLDVPPPFALTPRLGRAAFFHLGLE 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L   L+ A     + L EINPL +  +GR   LD+K+  DD+A+     + 
Sbjct: 160 PERFEAFFTLLSRLFAAVDAYGLLLAEINPLAVTPDGRFVALDAKVVVDDHAVCVTPALA 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D       E  A  H LS+++L G +G + NGAGLAMATMD +   G + ANFLD G
Sbjct: 220 RFGDDRFATPSERRAVAHKLSFVSLAGRVGLVANGAGLAMATMDALDTAGLSAANFLDFG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++ AAF +I +D +V    +N++GGI+ C  + + +   + +     P+V+R  
Sbjct: 280 GAADAPRLTAAFDLIFADPNVTACCVNMYGGILSCLDVAEALAVTLADAPPPRPVVVRFA 339

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDA 387
           G     G   +   GL +++ A D+D+A
Sbjct: 340 GNGATAGAARLRRLGLPSLLVAGDMDEA 367


>gi|319653328|ref|ZP_08007429.1| hypothetical protein HMPREF1013_04046 [Bacillus sp. 2_A_57_CT2]
 gi|317394977|gb|EFV75714.1| hypothetical protein HMPREF1013_04046 [Bacillus sp. 2_A_57_CT2]
          Length = 399

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 201/412 (48%), Gaps = 43/412 (10%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAI-KTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +K +L++  +PV    VISS   +E  I + L  P  V+K+ +  G RGK          
Sbjct: 9   SKTILKENGIPVPGHSVISS---SEQIIDQHLVKPC-VIKALVPVGKRGKA--------- 55

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G ++   +++       EI   T+           V  V +E+  DI  E Y+S+ +D 
Sbjct: 56  -GAIKFADTVEEAKVKADEIFQMTV-------RNFPVEKVLIEEKIDIDEEWYVSITIDP 107

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
              + A I +T+GG+++E++ KD P+K+    ++P   +       +   L + G+    
Sbjct: 108 QKQVPAIIVTTEGGVEVEDLVKDAPEKVVIYHVEPFNELHPFQAKEIWSELGITGKPLTK 167

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDV- 245
              +   LY+ F   D  +LEINPL++ K+ ++    S +  DD+ALYRH +++ + +  
Sbjct: 168 AAAILCKLYQVFLKYDCYILEINPLVLTKDEKVMAAASVMGVDDSALYRHPELEGMVESG 227

Query: 246 SEEDSREIEAKQHNL------------SYIALD-GNIGCMVNGAGLAMATMDIIKLYGGA 292
           SE   R +   +  +             Y  +D G IG M  G G ++ + D +   G  
Sbjct: 228 SERSWRPLTQLEKEMVKVNDADYRGTARYTEMDGGEIGFMCGGGGGSLLSFDALANLGVV 287

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILI--NIFGGIMRCDVLVKGILSAVKEVK 350
           PAN+ + GG   ++KV    K I S   VKG+ +  NI     + DV+ KGI++A++E+ 
Sbjct: 288 PANYTETGGNPPEEKVKGLTKGILSKQGVKGLFVAHNITNN-TQIDVMAKGIVTAIQELG 346

Query: 351 IN---IPLVMRLEGANVDIGNRLIAESGLNVITA-IDLDDAAQKIVHAVKGV 398
           I+    P+V+R  G N + G ++  E+G+      + +++AA ++V  ++GV
Sbjct: 347 IDPKVFPIVVREAGVNDEEGKKIFQEAGITYFGEDLTIEEAAAEMVKKMRGV 398


>gi|156053373|ref|XP_001592613.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980]
 gi|154704632|gb|EDO04371.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 580

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 152/287 (52%), Gaps = 23/287 (8%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           +L++ +DR++    FI   QG +   E+    P K  K      +G+T+         L+
Sbjct: 296 HLTISIDRSNRCPQFI--LQGPVKKNEI----PSKPKKSPFQYDLGITTGLRQKCATHLQ 349

Query: 179 LQGQARIDGGDLFP---NLYKAFCDKDMSLLEIN-----PLIIMKNGRLRVLDSKISFDD 230
           L  Q ++    L P    L++ F +K+  LL+       P       R+ +  +   FDD
Sbjct: 350 LVHQHKL----LHPIISGLFELFKEKEAFLLQTTIKGAPPWKERFQHRVSIEHANFGFDD 405

Query: 231 NALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDI 285
            A     RH +I  L     +D  E EA++H + YI L  DGNIG +VNGAGLAM T+D 
Sbjct: 406 AAFKSANRHSEIHSLPRADIQDPAETEAQKHGIVYIKLAGDGNIGTLVNGAGLAMNTVDA 465

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
           +   GG  ANFLD GG A  + V  +F++I  D  VK + +NIFGG+   D++ +GIL A
Sbjct: 466 LADAGGKAANFLDTGGKATAETVKKSFEVILRDERVKVVFVNIFGGLTLGDMIAEGILLA 525

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
             E+ + +P+V+R+ G N   G ++IAESGL +    D D+AA K++
Sbjct: 526 FGELGVRVPVVVRIRGTNEKEGQKIIAESGLPLYAYDDFDEAAAKVI 572


>gi|239906516|ref|YP_002953257.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha
           chain [Desulfovibrio magneticus RS-1]
 gi|239796382|dbj|BAH75371.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha
           chain [Desulfovibrio magneticus RS-1]
          Length = 705

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 179/396 (45%), Gaps = 23/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+  K LL +  + V  GV +    A  +A+   PGP Y +K+Q+  GGRGK    
Sbjct: 1   MLLTEHAGKELLAEAAIAVPPGVALEPDDAG-AAMPPFPGP-YFLKAQVLGGGRGK-AGG 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            LP     G+  E++        R +  ST         G R   + +E      R  YL
Sbjct: 58  VLPVAEASGL-AEAA--------RTLFSSTF-------GGVRPPFLRLEAAVPHERAFYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL V R           QGG+D+E +A      +  + + P +        +    L L 
Sbjct: 102 SLGVSRQRKGFCLTIGRQGGVDVEALAGT--DALLVIDVPPSLVCPPYAARAAFFHLGLP 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A      L   L+    D  + L EINPL      R   LD+K++ DDN       + 
Sbjct: 160 AEAYAPFETLLSRLFGVVADNGLLLAEINPLAYCAGERFVALDAKVTIDDNVATLRPALA 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD       E  A +  LS+++L G +G + NGAGLAMATMD ++  G   ANFLD G
Sbjct: 220 RYRDDRFATPAEGRAAEQRLSFVSLPGRVGLVANGAGLAMATMDALEAAGLPAANFLDFG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  AF ++ +D +V+   +N++GGI+ C  + + +  A+ +     P+V+R  
Sbjct: 280 GTADAARLRVAFDLLFADPAVEACCVNMYGGILSCADVAEAMACAL-DGDDGRPVVVRFA 338

Query: 361 GANVDIG-NRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G     G  RL A  G  V  A D+D A   +  AV
Sbjct: 339 GNAAKAGMERLRAMPGNRVRVAEDMDQAVVMLAEAV 374


>gi|70921230|ref|XP_733977.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506277|emb|CAH89244.1| hypothetical protein PC000082.04.0 [Plasmodium chabaudi chabaudi]
          Length = 207

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 107/173 (61%)

Query: 93  TKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ 152
           TKQTGP G + N V++ +   I +E Y++ L+DR S  +  + S+ GG  IE+++K  P+
Sbjct: 1   TKQTGPEGKKCNTVFICERFYIRKERYVAFLLDRNSDNICLLGSSVGGSSIEDISKKTPE 60

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI 212
            I+K+ I+   G+T+      C+ +  +G       D+  NLYK F   D +LLEINPL 
Sbjct: 61  AIYKININIKDGLTNGQSREFCEQIGFKGNELDIATDMLVNLYKIFKKYDCTLLEINPLS 120

Query: 213 IMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
              +GR+   D+K++FDDNA YR  +I + RD+++E+  E+EAK++NL+Y+  
Sbjct: 121 ETNDGRVLCCDAKLNFDDNAEYRQKEIFDKRDLTQENPEELEAKKYNLNYVVF 173


>gi|261203545|ref|XP_002628986.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081]
 gi|239586771|gb|EEQ69414.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081]
 gi|239608195|gb|EEQ85182.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ER-3]
 gi|327349379|gb|EGE78236.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ATCC
           18188]
          Length = 687

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 129/205 (62%), Gaps = 6/205 (2%)

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEED 249
           NL   F +K+  +LE   + +  +G  ++  ++  FDD A     R  DI +LR+ +EE 
Sbjct: 480 NLLDIFMNKEAFVLETM-VSVGSDGSFQINGARFGFDDAAFKSSKRQEDIHKLRNKAEEV 538

Query: 250 SREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDK 307
             E+EA+   + Y+ L  +G+IG +VNGAGLAM T+D +  +GG  ANFLD GG A  + 
Sbjct: 539 PEEVEAENEGIVYVKLAGEGSIGTLVNGAGLAMNTVDALTHHGGHCANFLDTGGKATSET 598

Query: 308 VAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           + ++F+II SD  VK I +NIFGG+   D++  GI+ A +++ + +P+V+RL G N ++G
Sbjct: 599 IKSSFRIILSDPRVKTIFVNIFGGLTLGDMIANGIIMAFRDLDMKVPVVVRLRGTNEELG 658

Query: 368 NRLIAESGLNVITAIDLDDAAQKIV 392
            ++IA+SGL +      ++AA+K++
Sbjct: 659 QKMIADSGLPLHAFDSFEEAAKKVI 683


>gi|288819034|ref|YP_003433382.1| citryl-CoA synthetase large subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|46849514|dbj|BAD17844.1| citryl-CoA synthetase large subunit [Hydrogenobacter thermophilus]
 gi|288788434|dbj|BAI70181.1| citryl-CoA synthetase large subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308752617|gb|ADO46100.1| Succinate--CoA ligase (ADP-forming) [Hydrogenobacter thermophilus
           TK-6]
          Length = 429

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 191/403 (47%), Gaps = 54/403 (13%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN++EY+A   + +KY +P  + +  SSV           G   VVKSQ+  G RGK   
Sbjct: 1   MNLYEYEAYDKIFKKYGIPTPEYMFESSVSDRLVEFVNQLGEC-VVKSQVLVGKRGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V+V S  +S I   + +L   +  +   P G     V V    +IL+ELY
Sbjct: 58  --------GAVKVCSDPQSAIETAQALLNYPVYGEM--PVG-----VLVARKVNILKELY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            S+             S +GGMDIEEV    P+K+    I+PL G+    V +   +LEL
Sbjct: 103 ASITYSTEVRAPVLTLSLEGGMDIEEVP---PEKVRSWTINPLKGLYPHMVRNY--LLEL 157

Query: 180 QGQARIDG-----GDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRV--LDSKISFDDN 231
                  G      ++  N+Y+AF + +  LLEINPL I   NG+L+V  LD+ ++ DD+
Sbjct: 158 GFPQEYMGILRELSEVVSNMYRAFWEAEARLLEINPLAICDVNGKLKVYALDAVVTIDDD 217

Query: 232 ALYRHLDIQELRDVSEED--SREIEA--------KQHNLSYIALDGNIGCMVNGAGLAMA 281
           A      I  +R   +     REIEA        +    SY+ +DG+I  M  G G +  
Sbjct: 218 ASVPPSKIYGVRTAMKRPPTEREIEASLIDRDDHRGKAGSYVEVDGDIAMMTFGGGGSTV 277

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI---MRCDV- 337
           T++     G  PANF D+GG    +K+    KII S   ++G+L  + GG     R DV 
Sbjct: 278 TIETTYAIGLKPANFTDIGGNPPAEKMYKITKIILSKPGIRGVL--VCGGTANNTRIDVT 335

Query: 338 LVKGILSAV----KEVKIN--IPLVMRLEGANVDIGNRLIAES 374
           L +G+ +A+    KE K+N     V+R  G   + G R++ E+
Sbjct: 336 LGEGVANAIRDLYKEGKLNPDWIWVVRRNGPEAEKGLRMLYEA 378


>gi|289568924|ref|ZP_06449151.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T17]
 gi|289542678|gb|EFD46326.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T17]
          Length = 277

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 19/291 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A+ AI T  G   +VK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAK-AIATEIGRPVMVKAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D    +R     
Sbjct: 163 AEVLDTAPVTIAELWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDCFFDFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDIIKLYG 290
           E  D +  D  E++AK+H+L+Y+ L     G    GAGL M+T+D++   G
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLGRSGGGSSAMGAGLVMSTLDVVAYAG 273


>gi|213619250|ref|ZP_03373076.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 183

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 102/182 (56%), Gaps = 10/182 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQ 182
           G+
Sbjct: 171 GK 172


>gi|154287808|ref|XP_001544699.1| hypothetical protein HCAG_01746 [Ajellomyces capsulatus NAm1]
 gi|150408340|gb|EDN03881.1| hypothetical protein HCAG_01746 [Ajellomyces capsulatus NAm1]
          Length = 154

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 103/150 (68%), Gaps = 2/150 (1%)

Query: 245 VSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +++E   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + L+GG  ANFLD GG 
Sbjct: 1   MAQEVPEEVEAEKEGIVYVKLPGEGSIGTLVNGAGLAMNTVDALTLHGGHCANFLDTGGK 60

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + V ++F+I+ SD  VK I +NIFGG+  CD++  GI+ A +++ + +P+V+RL G 
Sbjct: 61  ATSETVKSSFRIVLSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLDMKVPVVVRLRGT 120

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           N ++G ++IA+S L +      ++AA K++
Sbjct: 121 NEELGQKMIADSRLPLHAFDSFEEAASKVI 150


>gi|289616472|emb|CBI56787.1| unnamed protein product [Sordaria macrospora]
          Length = 625

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 124/210 (59%), Gaps = 10/210 (4%)

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL----DIQELRDV 245
           L   L   F +K+  LL  +  ++ + G ++V+ ++ +FD  A +R+      I+ +   
Sbjct: 414 LIKTLTNLFYEKEGLLLTTH--LVERLGEIKVVHARFAFD-QASFRNGTPPDKIKAMHVR 470

Query: 246 SEEDSREIEAKQHNLSYIALDG---NIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           + +D  EIEA++  + Y+ L G    IG +VNGAGLAM T+D +   GG  ANFLD GG 
Sbjct: 471 ATDDPAEIEAERSGIVYVKLPGEDVTIGTLVNGAGLAMNTVDALADAGGKAANFLDTGGK 530

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + V  +F+ I  D  VK + +NIFGG+   D++ +GI+ A KE+ + +P+V+R+ G 
Sbjct: 531 ATSETVKESFRTILQDPRVKVVFVNIFGGLTLGDMIARGIIMAFKELSLTVPVVVRIRGT 590

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           N + G ++IA+SGL +    D ++AA K +
Sbjct: 591 NEEEGQKIIADSGLPLYAFDDFEEAAAKAI 620


>gi|195953640|ref|YP_002121930.1| Succinate--CoA ligase (ADP-forming) [Hydrogenobaculum sp. Y04AAS1]
 gi|195933252|gb|ACG57952.1| Succinate--CoA ligase (ADP-forming) [Hydrogenobaculum sp. Y04AAS1]
          Length = 423

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 194/404 (48%), Gaps = 56/404 (13%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKG 57
           MN++E++A   + +KY VPV   +    ++     +K     L   VVKSQ+  G RGK 
Sbjct: 1   MNLYEFEAYDKIFKKYGVPVLNYMYADHIN---DDLKDFANKLGESVVKSQVLVGKRGKA 57

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     G V++  + +  I   + +L   +  +   P G     + + + A IL+E
Sbjct: 58  ----------GAVKLCKTPEEAIETAKALLQYPVYGEM--PVG-----IIIAEKAKILKE 100

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDM 176
           LY S+     +     + S +GGMDIEEV    P+K+    IDPL+G+    V   L DM
Sbjct: 101 LYASITYSTETRTPVLVLSLEGGMDIEEVP---PEKVRTFKIDPLVGLYPYMVREYLMDM 157

Query: 177 ---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRV--LDSKISFDD 230
               E  G  R +  ++  NLYKAF + +  L+EINPL I   NG+ +V  LD+ ++ DD
Sbjct: 158 GFPKEYIGVLR-ELSEVIANLYKAFWETEAKLIEINPLAICDVNGKQKVYALDAVVTIDD 216

Query: 231 NALYRHLDIQELRDVSEED--SREIEA--------KQHNLSYIALDGNIGCMVNGAGLAM 280
           +A      I  +R   +     REIEA        +    SY+ +DG+I  M  G G + 
Sbjct: 217 DASIPPTKIYGVRSAMKRPPTQREIEASLIDRDDHRGKAGSYVEMDGDIALMTFGGGGST 276

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI---MRCDV 337
            T++     G  PANF D+GG    +K+     II S   +KG+L  + GG     R DV
Sbjct: 277 VTIETCYNIGLKPANFTDIGGNPPAEKMYKITHIILSKPGIKGVL--VCGGTSNNTRIDV 334

Query: 338 -LVKGILSAVKEVK------INIPLVMRLEGANVDIGNRLIAES 374
            L +G+ +A++++K       N   V+R  G   + G R++ E+
Sbjct: 335 TLGEGVANAIRDLKKEGKLDPNWVWVVRRNGPEAEKGLRMLYEA 378


>gi|68488751|ref|XP_711801.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
 gi|68488788|ref|XP_711783.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
 gi|46433107|gb|EAK92561.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
 gi|46433126|gb|EAK92579.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
          Length = 120

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 80/114 (70%)

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           MATMDIIKLYGG PANFLD GG A  + +  AF++I SD  V GI +NIFGGI+RCD + 
Sbjct: 1   MATMDIIKLYGGEPANFLDCGGTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVA 60

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           KG+++A K   ++IP+V+RL+G N+     LI  SGL +    DLD AA+KIV 
Sbjct: 61  KGLIAATKNFNLDIPVVVRLQGTNMAEAKELIDNSGLKLYAFEDLDPAAEKIVQ 114


>gi|163782675|ref|ZP_02177672.1| hypothetical protein HG1285_17365 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882248|gb|EDP75755.1| hypothetical protein HG1285_17365 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 433

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 196/402 (48%), Gaps = 52/402 (12%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSV-HAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M+++EY+A   + +KY +P  K + +  +    E+ +  L G   VVKSQ+  G RGK  
Sbjct: 1   MDLYEYEAYDKIFKKYGIPTLKYMFVDHITEEVENFVNQL-GEC-VVKSQVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V++ SS +  +  I+ +L   +  +   P G     V V + A+I++E+
Sbjct: 58  ---------GAVKLCSSPEEALETIKTLLEYPVYGEM--PVG-----VLVAEKANIVKEI 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+     +       S +GG+DIEEV +D   KI    IDPL G+    V +    L 
Sbjct: 102 YASITYSTETRTPVLTLSFEGGVDIEEVPED---KIGIFPIDPLKGLYPHMVRNYLLELG 158

Query: 179 LQGQ---ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRV--LDSKISFDDNA 232
           +  +   A  +  ++  N+Y AF + +  LLEINPL I+  NG+LRV  LD+ +  DD+A
Sbjct: 159 MPQEYLSAMRELSEVVANMYNAFWNAEARLLEINPLAIVDVNGKLRVRALDAVVKIDDDA 218

Query: 233 LYRHLDIQELRDVSEED--SREIEAKQHNL--------SYIALDGNIGCMVNGAGLAMAT 282
                 I  +R         REI A + +         SY+ +DG+I  M  G G +  T
Sbjct: 219 SIPPAKIYGVRTAMRRPPTEREIAAAEIDKDDHRGKAGSYVEVDGDIAMMTFGGGGSTVT 278

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI---MRCDV-L 338
           ++     G  PANF D+GG    +K+    +II S   ++G+L  + GG     R DV L
Sbjct: 279 IETTYAIGMKPANFTDIGGNPPAEKMYKITRIILSKPGIRGVL--VCGGTANNTRIDVTL 336

Query: 339 VKGILSAVKEVK------INIPLVMRLEGANVDIGNRLIAES 374
            +G+ +A++++K       N   V+R  G   + G +++ E+
Sbjct: 337 GEGVANAIRDLKKEGKLDPNWIWVVRRNGPEAEKGLKMLYEA 378


>gi|312214014|emb|CBX94016.1| similar to succinyl-CoA ligase subunit alpha [Leptosphaeria
           maculans]
          Length = 700

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 124/226 (54%), Gaps = 17/226 (7%)

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLD 238
           +AR     L  NL+K + +K+     +   + +    + V +  + FDD A     RH D
Sbjct: 466 KARAQTATLITNLWKLYKEKEAVDAHVCLALSVDTDEILVYNPHLFFDDAAFKSNNRHPD 525

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGN---------IGCMVNGAGLAMATMDIIKLY 289
           +  LR  S     +++A+ H + YI L+           IG +VNGAGLAM T+DI+   
Sbjct: 526 LHSLRPKSSLSPTDLDAEHHGIVYIRLESPPASPSPRNLIGTLVNGAGLAMNTIDILHTR 585

Query: 290 GGAP----ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
             AP    ANFLD GG A    +  +F+++  D  V  + +NIFGG+ RCD++ +GI+ A
Sbjct: 586 L-APTTTCANFLDTGGKATAHTIKTSFELLLRDPRVAVLFVNIFGGLTRCDMIAEGIVLA 644

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            +EV +  P+V+RL+G N ++G +++  +G+ ++   + ++A +++
Sbjct: 645 YREVGVRKPVVVRLKGTNEEVGGKVLEGAGVPILAVEEFEEAVRRV 690


>gi|157364314|ref|YP_001471081.1| succinate--CoA ligase (ADP-forming) [Thermotoga lettingae TMO]
 gi|157314918|gb|ABV34017.1| Succinate--CoA ligase (ADP-forming) [Thermotoga lettingae TMO]
          Length = 358

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 181/395 (45%), Gaps = 68/395 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEY  K +L++    V K V+I+        ++ L  P +V+K+Q+  GGR K    
Sbjct: 22  MKIHEYVGKNVLKENGFNVPKSVLINGPFERRD-LEQLDLP-HVLKAQVLVGGRMKA--- 76

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    S +     I  +LG  +        G +   V VE+  +  RE YL
Sbjct: 77  -------GGVVFSRSYEETYQKISYLLGRKI-------KGEKCTKVLVEEVFEHDREEYL 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR    +  + S  GG+DIE+V K   QKI K        +  ED++ L D +   
Sbjct: 123 SILIDRDIRDITVLYSEFGGIDIEDVEK---QKIVK--------IKMEDISKLPDHVR-- 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L   F +KD++LLEINP+         +LD  +  D+NALYR     
Sbjct: 170 --------DITYKLVNLFIEKDLTLLEINPIAFNNKDEYMMLDCVMHIDENALYRQNWCP 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++     E                L G++G +  GAG+ MAT D +   G  P  F D+G
Sbjct: 222 QIPSFDPE----------------LQGDVGIIGCGAGIVMATFDAVIECGLKPGAFCDLG 265

Query: 301 GGADQDKVAAAFKIITSDSSV-KGILINIFGGIMRCDVLVKGILSAVKEVKINIP---LV 356
           GGA ++    A K++   S   K I+ NIFGGI   D +   I SA+ E K   P   + 
Sbjct: 266 GGAKKEN---ALKVLNDLSKRNKKIVANIFGGIT--DTM--EIASAIIECKGKNPEIQIF 318

Query: 357 MRLEGANVDIGNRLIAESGLNVI-TAIDLDDAAQK 390
            R+ G N     +L+ E+G+ V  +  DL +A ++
Sbjct: 319 ARITGNNEMFSRKLLTENGIKVFDSTTDLINALRR 353


>gi|317485054|ref|ZP_07943936.1| ATP-grasp domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316923589|gb|EFV44793.1| ATP-grasp domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 425

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 175/393 (44%), Gaps = 63/393 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ K  L K  +PV KG V SS   AE A + + GP+  VK Q+ AGGRGK        
Sbjct: 6   EYQGKEWLAKGGMPVPKGRVASSPEEAEEAARWIGGPV-AVKGQVQAGGRGKA------- 57

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G V++  + +   +   EIL  T+        G  V  V +E+  DI +E Y S ++
Sbjct: 58  ---GIVKLADTPEEARALAEEILAKTV-------KGLPVEKVLIEEKLDIKKEYYCSFVI 107

Query: 125 D--RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +  R +     + ST+GGMDIE V +     +F+L IDP  G+ S D   +C       Q
Sbjct: 108 NNAREARCPMLMFSTEGGMDIESVDESL---LFRLNIDPQYGLQSYDAIDVCT------Q 158

Query: 183 ARIDGGDL------FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           A I   DL         L K +   D   LEINP ++  +G L   D K+  D++A++RH
Sbjct: 159 AGIAPADLSKFASFLTKLSKLYKKYDCQTLEINPFVMTGDGSLYCADCKMEIDNSAVFRH 218

Query: 237 LD--IQELRDVSEEDS---------REIEAKQH----NLSYIALD-GNIGCMVNGAGLAM 280
            D  I+  RD+  + +          E +A+      N+ Y  +  G +G    G G AM
Sbjct: 219 PDFGIKIARDLPGQPTDLDVIGWGIEETDARGTGFLMNMGYDEVSPGYVGYHPIGGGSAM 278

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD---- 336
             +D +   G   AN+ D  G     K+    K   S  +++G L+   GG M  +    
Sbjct: 279 MGLDALNAVGLKAANYADTSGNPVAAKIYRVAKATLSQPNIEGYLL---GGFMMANQEQW 335

Query: 337 ----VLVKGILSAVKEVKINIPLVMRLEGANVD 365
                LVK +L  +   K   P V+ L G   D
Sbjct: 336 HHAHALVK-VLREMLPKKPGFPCVLLLCGNRED 367


>gi|284045663|ref|YP_003396003.1| succinate--CoA ligase (ADP-forming) [Conexibacter woesei DSM 14684]
 gi|283949884|gb|ADB52628.1| Succinate--CoA ligase (ADP-forming) [Conexibacter woesei DSM 14684]
          Length = 403

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 193/420 (45%), Gaps = 41/420 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY+++ ++ K  +PV++     +   A    + +  P+ V+KSQ+  GGR K    
Sbjct: 1   MRFFEYESRQIVAKAGIPVSRHGFARTADEARRIAEEIGEPV-VIKSQVLTGGRMKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +     +   +IL       Q    G     V V+   D+ +E Y 
Sbjct: 57  -------GGVKFADTPDEAAAHAADIL-------QLEINGHMPRGVLVDSRVDVKQEFYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ D        + S  GG+DIEEVA+ +P ++ +     L  V+  +   +   + + 
Sbjct: 103 GVVWDGIRKQPVMLFSDMGGIDIEEVAETHPDRVGRAHFSNLGEVSDYEAKQVIASIGVT 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      +   L + F ++DM+L EINPL  +++GR   +D+ +  ++ A  R   + 
Sbjct: 163 GSALTRATPILVRLARLFVERDMTLAEINPLAQLQDGRFVAVDAHMDMENEARPRQKKLL 222

Query: 241 ELRDVSEEDSREI-EAKQHNLSYIA---------------LDGNIGCMVNGAGLAMATMD 284
               V +E++R+  EA +  L+  A                DGN+G ++   G ++   D
Sbjct: 223 AELGVGDEETRQAREATEFELAGEAVDAASHRGVAGNVTEFDGNLGLVIGAGGGSLTLFD 282

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVK--GILINIFGGIMRCDVLVKGI 342
            ++ +GG PAN+ ++GG    +K     K++     V    ++++I     R D++ +G+
Sbjct: 283 AVRAHGGKPANYCEIGGNPSVEKACGLAKLVLQKPGVDKIAVMMSIVSN-TRVDIVARGV 341

Query: 343 LSAVKEVKINIP---LVMRLEGANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAVKGV 398
           + A  E+  +      + R+ GA  D G +++ + G+     ++ + +AA++ V  ++GV
Sbjct: 342 IKACVELGYDPAEKIAIFRIPGAWEDEGFKILEKYGVEYCDRSVSMHEAARRAVEKIEGV 401


>gi|324547113|gb|ADY49720.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 118

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/107 (54%), Positives = 81/107 (75%)

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           MATMDIIKL+GG PANFLDVGG   ++ V AAFKIITSD  VK IL+NIFGGI+ C V+ 
Sbjct: 1   MATMDIIKLHGGRPANFLDVGGTVSEEAVCAAFKIITSDPQVKAILVNIFGGIVSCLVIA 60

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            G+++A K++++ +PL++RLEG        ++  SGL +ITA+++D+
Sbjct: 61  NGLVAACKKIELKVPLIIRLEGTKAVEAREVLKASGLPLITAVNMDE 107


>gi|289547975|ref|YP_003472963.1| succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484]
 gi|289181592|gb|ADC88836.1| Succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484]
          Length = 432

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 190/403 (47%), Gaps = 54/403 (13%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN++EY+A   + +K+ +PV + +    V+          G   VVKSQ+  G RGK   
Sbjct: 1   MNLYEYEAYDKIFKKFGIPVPRYMFADHVNDQLVEFINQLGEC-VVKSQVLVGKRGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V+V  + +  +  +  +L   +  +   P G     V V + A+IL+ELY
Sbjct: 58  --------GAVKVCKNPEEAVETVEALLQYPVYGEM--PVG-----VLVVEKANILKELY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            S+             S +GGMDIEEV    P+K+   +IDPL G+    V +   +LEL
Sbjct: 103 ASITYSTEVRAPVVTLSLEGGMDIEEVP---PEKVRSWVIDPLKGLYPHMVRNY--LLEL 157

Query: 180 QGQARIDG-----GDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDN 231
                  G      ++  N+++AF + +  LLEINPL I + G   ++  LD+ ++ DD+
Sbjct: 158 GFPQEYMGVLRELSEVIANMWRAFWESEARLLEINPLAICQVGDKQKVLALDAVVTIDDD 217

Query: 232 ALYRHLDIQELRDV--SEEDSREIEA--------KQHNLSYIALDGNIGCMVNGAGLAMA 281
           A      I  +R         REI+A        +    SY+ +DG+I  M  G G +  
Sbjct: 218 ASVPPTKIYGVRTALKRPPTEREIQASLIDRDDHRGKAGSYVEMDGDIAMMTFGGGGSTV 277

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI---MRCDV- 337
           T++     G  PANF D+GG    +K+    +II S   ++G+L  + GG     R DV 
Sbjct: 278 TIETAYAVGLKPANFTDIGGNPPAEKMYKITRIILSKPGIRGVL--VCGGTANNTRIDVT 335

Query: 338 LVKGILSAV----KEVKI--NIPLVMRLEGANVDIGNRLIAES 374
           L +G+ +A+    KE K+  N   V+R  G   + G R++ E+
Sbjct: 336 LGEGVANAIRDLYKEGKLDPNWIWVVRRNGPEAEKGLRMLYEA 378


>gi|83589265|ref|YP_429274.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Moorella
           thermoacetica ATCC 39073]
 gi|83572179|gb|ABC18731.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Moorella
           thermoacetica ATCC 39073]
          Length = 417

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 157/348 (45%), Gaps = 44/348 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ K  LRK  +PV  G   S+   A      L  P+  VK+Q+ AGGRGK        
Sbjct: 6   EYQGKEWLRKAGIPVPAGRAASTPEEARQIAAELGKPV-AVKAQVQAGGRGK-------- 56

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G V++ ++ +   +    ILG+ +        G  V  V VE+  DI  E Y++++V
Sbjct: 57  --SGAVKLVNTPEEARAAAASILGTQI-------KGYPVRQVLVEEKLDIAHEYYVTIIV 107

Query: 125 D--RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +  R +     + ST+GGMDIE V +   +KIFKL I PL G+   D   L     +   
Sbjct: 108 NSARDARCPMLMFSTEGGMDIESVPE---EKIFKLHISPLFGLEVYDAVDLLVKAGIPND 164

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH--LDIQ 240
             ++  +     + A+   D   LE NPL++  +G L   D K+  D++++YRH  + I+
Sbjct: 165 QLMNFANFLVKFWGAYKKYDCFTLETNPLVMTASGDLVAADCKMDVDNSSVYRHPEMGIE 224

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGN---------------IGCMVNGAGLAMATMDI 285
             RD+  E + E++     +    L G+               IG    G G AM  MD 
Sbjct: 225 IARDLGHEPT-ELDVIGWGIEKTDLRGSGFVMSMGFDEKSPGYIGYHPIGGGSAMMGMDA 283

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           +      PAN+ D  G     K+    K+I S  ++ G L+   GG M
Sbjct: 284 LNNVNLKPANYADTSGNPVASKIYRVAKVILSQPNIDGYLL---GGFM 328


>gi|116335002|ref|YP_802497.1| succinyl-CoA synthetase beta subunit [Candidatus Carsonella ruddii
           PV]
 gi|116235283|dbj|BAF35131.1| succinyl-CoA synthetase beta subunit [Candidatus Carsonella ruddii
           PV]
          Length = 345

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 171/362 (47%), Gaps = 51/362 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ E+++K +L KYN+P+    + S+    ++         Y+ K Q++   R K    
Sbjct: 1   MNLCEFESKKILFKYNLPILNSYLTSNYTYVKN---------YIYKIQVNLNYRKK---- 47

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGG+ +  S   +    ++        K+T     ++    +E  + I  E +L
Sbjct: 48  ------KGGILIPHSKNELKVFYKK-------WKKTKFNNKKIKYFLLEKISKIEIEFFL 94

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLEL 179
           S  V   +  +  I S +GG+++E   K+Y     KL I   I   S  D    C + + 
Sbjct: 95  SFFVHDNN--LTIIISNKGGINVELENKNY---FLKLNIKTFIVFYSIYDYLLNCKIFK- 148

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +  +   +L   LYK     ++ L+EINPLI+ K  ++ +LD KI            I
Sbjct: 149 --KNILSILNLVFKLYKIIICNNLLLVEINPLIVYK-KKIYILDCKI------------I 193

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E   + +E+  +  +    ++YI L GNI C+VNGAGLA+ T+DI+       ANF+D+
Sbjct: 194 TE--KIKKENFSDNISNILKINYIKLKGNICCIVNGAGLALKTLDILSFNNLKCANFIDL 251

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
            G   +  +    K+I  D  +  +LINIFGGI+ C+ ++ G L+ +     N  ++++L
Sbjct: 252 SGSITEVNINNLLKVILIDKKLNFLLINIFGGIVSCEKILIGFLN-IFYYDFNFKIIIKL 310

Query: 360 EG 361
            G
Sbjct: 311 NG 312


>gi|325290303|ref|YP_004266484.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324965704|gb|ADY56483.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 424

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 174/389 (44%), Gaps = 55/389 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ K+ L K  +PV KG   S+   A+   + + GP+  VK QI AGGRGK        
Sbjct: 6   EYQGKSWLAKAGMPVPKGRPASTPQEAKEVAEWIGGPV-AVKGQIQAGGRGKA------- 57

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G V++ ++ +   +   EIL  T+        G  +  V +E+  DI +E Y S ++
Sbjct: 58  ---GIVKLVNTPEEAEAAAAEILAKTI-------KGLPIRQVLIEEKLDIKKEFYCSFVI 107

Query: 125 DRT----SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + +    S MV F  ST+GGMDIE V ++    + K+ +DP+ G+ + D   L     +Q
Sbjct: 108 NNSREARSPMVMF--STEGGMDIESVPEEL---LIKVNVDPIKGLQTYDAIDLAVKAGIQ 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD-- 238
            +        F  L + F   D   LEINP I+   G L   D K+  D++A+ RH +  
Sbjct: 163 AKDLTKFASFFTRLSQTFKKYDCQTLEINPFIMTGKGDLICADCKMEIDNSAVGRHPEFG 222

Query: 239 IQELRDVSEEDS---------REIEAKQH----NLSYIALD-GNIGCMVNGAGLAMATMD 284
           I+  RD+  E +          E +A+      N+ Y  +  G IG    G G AM  +D
Sbjct: 223 IKIARDLPGEPTELDIIGWSIEETDARGTGFLMNMGYDEVSPGYIGYHPIGGGSAMMGLD 282

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM--------RCD 336
            +   G  PANF D  G     K+    K + S  ++ G    + GG M          +
Sbjct: 283 ALNQVGLKPANFADTSGNPVGSKIYRVAKCVLSQPNIDGY---VLGGFMMANQEQWHHAN 339

Query: 337 VLVKGILSAVKEVKINIPLVMRLEGANVD 365
            +VK +L      K  +P V+ L G   D
Sbjct: 340 AMVK-VLREELPKKPGLPCVLLLCGNRED 367


>gi|257485470|ref|ZP_05639511.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 99

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 79/98 (80%)

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RL
Sbjct: 1   GGGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRL 60

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 61  EGNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 98


>gi|85111717|ref|XP_964070.1| hypothetical protein NCU09810 [Neurospora crassa OR74A]
 gi|28925833|gb|EAA34834.1| hypothetical protein NCU09810 [Neurospora crassa OR74A]
          Length = 646

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 118/210 (56%), Gaps = 10/210 (4%)

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL----DIQELRDV 245
           L   L   F +K+  LL  +  I+ +   ++V+ ++ +FD  A +R+      I+ +   
Sbjct: 435 LIETLATLFYEKEGLLLTTH--IVERLRGIKVVHARFAFD-QATFRNGTPPDKIKAMYVC 491

Query: 246 SEEDSREIEAKQHNLSYIAL---DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           + ++  E +A++  + YI L   D  IG +VNGAGLAM T+D +   GG  ANFLD GG 
Sbjct: 492 ATDEPAEAKAERSGIVYIKLPGEDATIGTLVNGAGLAMNTVDALADAGGKAANFLDTGGK 551

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A    V  +F II  D  V+ I +NIFGG+ R DV+  GI+ A KE+ + +P+V+R+ G 
Sbjct: 552 ATSQTVKESFMIILQDPRVRVIFVNIFGGLTRGDVIAHGIIVAFKELSLTVPVVVRIRGT 611

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           N   G ++IA+S L +    D + AA K +
Sbjct: 612 NETEGQKIIADSQLPLYAFDDFEVAAAKAI 641


>gi|113476345|ref|YP_722406.1| succinyl-CoA synthetase subunit beta [Trichodesmium erythraeum
           IMS101]
 gi|110167393|gb|ABG51933.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Trichodesmium
           erythraeum IMS101]
          Length = 405

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 193/435 (44%), Gaps = 69/435 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL  +  +PV     I   +  +     +P P+ V+KSQ+H G R      
Sbjct: 1   MDLLEYQAKALFSEMGIPVLPSQRID--YPKDLKKLKIPYPV-VLKSQVHTGERS----- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                S GG++   +    ++  + I    L  K   P        Y  D     +ELYL
Sbjct: 53  -----SLGGIKFVENTIDAVAAAQTIFN--LPIKDEYPAVLLAEAKYNAD-----QELYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + S QGG+D E   K   + +      P           L   + L+
Sbjct: 101 AVVLDPIVRRPVLLGSKQGGIDTETAIKSMQKVVVNQEFSPFYA------RRLMVKIGLE 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   +Y+ F +KD+ ++EINPL I   G +  LD K+S +D AL RH ++ 
Sbjct: 155 GKLIELVSHIVEKMYQLFVEKDLDMIEINPLGISPKGEVMALDGKVSVNDYALGRHPELL 214

Query: 241 ELRDVSEEDSREIEAKQ--------------------------HNLSYIALDGNIGCMVN 274
            +   +  D+ EI+ K+                          + L +  L GNIG + N
Sbjct: 215 SIVGQNISDNYEIKQKEVKEIEDSSLLVFNNINAVSNRKIIPDYRLKFKELQGNIGILCN 274

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGG-------ADQDKVAAAFKIITSDSSVKGILIN 327
           G GL MAT+D++    G PANFL++  G       + + ++  A  +++   ++K +LIN
Sbjct: 275 GKGLTMATVDMVIQAQGKPANFLNIKLGDYLEVKNSLRSQMFTALDLVSQRDNIKVVLIN 334

Query: 328 IFGGIMRCDVLVKGI------LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
           + G +   D L+  +      L+++ + KI    V+RL G  +      +++  + VI  
Sbjct: 335 VIGIVETSDELITIVYEYLNKLTSIDQKKIR--FVLRLLGGRISKARERLSDLPVEVIE- 391

Query: 382 IDLDDAAQKIVHAVK 396
            +L+DA  + V+  K
Sbjct: 392 -NLEDAVSQAVYLSK 405


>gi|10802763|gb|AAG23603.1|AF244654_1 hypothetical succinyl-CoA synthetase [Carboxydothermus
           hydrogenoformans]
          Length = 146

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDS 319
           +S++ LDG+I  M NGAG+ MAT+D+I  +GG P NF+D GGGA+ +++A A  ++ S +
Sbjct: 21  VSFVELDGDIAVMANGAGITMATLDLIAYFGGRPKNFMDAGGGANAEQMAKALDLLIS-T 79

Query: 320 SVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
           + K ILINIFGGI RCD + K  L+  +E +I +P+V+RL G N DIG +++ E+G+   
Sbjct: 80  NPKAILINIFGGITRCDEVAKAYLTVKQEREITVPVVIRLVGTNEDIGVKMLQEAGVESF 139

Query: 380 TA 381
           ++
Sbjct: 140 SS 141


>gi|330935373|ref|XP_003304935.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1]
 gi|311318125|gb|EFQ86872.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1]
          Length = 724

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 38/278 (13%)

Query: 152 QKIFKLLIDPLIGVTSEDVASLCDMLELQG---QARIDGGDLFPNLYKAFCDKDMSLLEI 208
           Q++ +   D   G T+E +A+    L+L     +A+     L  NL+  + +K+   + +
Sbjct: 438 QRVRRFPFDYCSGPTAEGIANAIAHLQLDAAPPKAKAQVVQLIQNLWTLYTEKEAIDVHV 497

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           N  + + +  L V    + FDD A     R   +  LRD +   + + EA+   + Y+ L
Sbjct: 498 NLALSVDDDELLVYSPYLFFDDAAFKSGKRQAHLHALRDEASVSATDREAEDAGIVYVPL 557

Query: 266 DGN--------------------------IGCMVNGAGLAMATMDIIKLYGGAP------ 293
                                        +G +VNGAGLA+ T+D +     AP      
Sbjct: 558 ASPMFPPGTTQKGTQTPPSSPAEDETRNLVGTLVNGAGLALNTIDTLSARLSAPPYATSA 617

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD GG A  D +  +FK+I SD  V  + +NIFGG+  CD++ +GI+ A KE+ +  
Sbjct: 618 ANFLDTGGKATSDTIKTSFKLILSDPRVSVVFVNIFGGLTLCDMIAEGIILAFKELDVKK 677

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           P+V+RL G N   G +++ ++ L +    D ++A +K+
Sbjct: 678 PVVVRLRGTNEAKGQKVLEDAKLPIHAFDDFEEAVKKV 715


>gi|89894672|ref|YP_518159.1| hypothetical protein DSY1926 [Desulfitobacterium hafniense Y51]
 gi|219669113|ref|YP_002459548.1| succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
 gi|89334120|dbj|BAE83715.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539373|gb|ACL21112.1| Succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
          Length = 425

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 170/391 (43%), Gaps = 58/391 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ K  L K  +PV KG   S+   A  A + + GP+  VK Q+ AGGRGK        
Sbjct: 6   EYQGKEWLAKAGMPVPKGRPASTPEEAREAAEWIGGPV-AVKGQVQAGGRGKA------- 57

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G V++ ++     +   EIL  T+        G  V  V VE+  DI +E Y S +V
Sbjct: 58  ---GIVKLVNTPDEAAAAAAEILSKTV-------KGLPVRKVLVEEKLDIKKEFYCSFVV 107

Query: 125 ----DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
               +  S M+ F  S +GGMDIE V +D   K+ K+ +DP+ G+ + D   L     + 
Sbjct: 108 NGAKEARSPMLMF--SVEGGMDIESVPED---KLLKINVDPINGLQTYDAVDLAAKAGIA 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH---- 236
            +           L + +   D   LEINP ++  NG L   D K+  D++++ RH    
Sbjct: 163 PEELTKFAKFLTKLSQTYKKYDCMTLEINPFVMTGNGNLICADCKMEIDNSSVGRHPEFG 222

Query: 237 LDIQELRDVSEEDS---------REIEAKQH----NLSYIALD-GNIGCMVNGAGLAMAT 282
            DI   RD+  E +          E +A+      N+ Y  +  G +G    G G AM  
Sbjct: 223 FDIA--RDLPGEPTELDYIGWSIEETDARGTGFLMNMGYDEVSPGYVGYHPIGGGSAMMG 280

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD------ 336
           +D +   G  PAN+ D  G     K+    K + S  ++ G L+   GG M  +      
Sbjct: 281 LDALNQVGLKPANYADTSGNPVASKIYRVAKSVLSQPNIDGYLL---GGFMMANQEQWHH 337

Query: 337 --VLVKGILSAVKEVKINIPLVMRLEGANVD 365
              +VK +   +   K  +P V+ L G   D
Sbjct: 338 AHAIVKVLREILPTQKPGLPCVLLLCGNRED 368


>gi|320593459|gb|EFX05868.1| succinyl-synthetase subunit [Grosmannia clavigera kw1407]
          Length = 707

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 141/282 (50%), Gaps = 17/282 (6%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVA-KDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           YL++ VDR++     +A+     D   VA K +P       ID   G+  E VA+    L
Sbjct: 415 YLAITVDRSARSPCVLAAPDFDCDRSTVALKRFPFAYGPSGID---GLLVERVAAHLG-L 470

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L   +     DL   LY  F  ++  L+E    ++ +  +L+V+ +++  DD  +    
Sbjct: 471 SLHAGSVEALRDLLRALYDVFVGQEAFLVETA--VVQRLAQLKVVGARLGLDDAGVGAR- 527

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIAL-------DGNIGCMVNGAGLAMATMDIIKLYG 290
           +      ++E D  E  AK++ + YI L         +I  +VNGAGLAM T+D +   G
Sbjct: 528 EATATTTIAEPD--EAAAKENGIVYIKLGQSDAAEPAHIATLVNGAGLAMNTVDALAGLG 585

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G   NFLD GG A  + V   F ++  D  V+ IL+N+FGG+   D++ +G+L A +E  
Sbjct: 586 GRATNFLDTGGKATSETVRVCFDVLLRDPRVRVILVNVFGGLTLGDMIARGVLLAFRETC 645

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + +P+V+R+ G N   G  +I ESGL +       +AA K V
Sbjct: 646 VTVPVVVRIRGTNEAEGQCIIRESGLPLFAFDSFQEAAAKAV 687


>gi|186685262|ref|YP_001868458.1| ATP-grasp domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186467714|gb|ACC83515.1| ATP-grasp domain protein [Nostoc punctiforme PCC 73102]
          Length = 408

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 164/401 (40%), Gaps = 55/401 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I   H  +     +  P+ V+KSQ+H   R K    
Sbjct: 1   MDLLEYQVKEWFGKIGIPVLPSQRID--HPTDLKRLKIRFPI-VLKSQVHGAERAKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR   +    I+  + I    +        G     V  E   D  +E YL
Sbjct: 55  -------GGVRFAETTIDAIAAAQNIFSLPI-------WGELPEVVLAESQYDANQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        +   +  +D E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTAVCRPVLLGCKEADIDWESAGEKMHHVVVEQEFSPFYA------RRLALKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y  F  KD+ L+EINPL +  NG++  L+ K+  ++ A+ RH D+ 
Sbjct: 155 GTLMQSVSSVLEKMYHLFVQKDLDLVEINPLAVSANGQVMALNGKVRINERAIKRHPDLA 214

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP----- 293
           E+  + +S   S EI     +   + + G IG + NG G  MAT+D++   GG P     
Sbjct: 215 EMAAKIISRHTSTEINGILGDWDGVKMHGKIGILGNGTGSVMATLDLVANAGGNPGVCLN 274

Query: 294 ---ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV---- 346
              A   D      +D++    KI+ +D  ++ ILIN  G I + + +VK I   V    
Sbjct: 275 LRHAFLTDTTPTTFRDRLETGLKILEADKGIQVILINFLGSIPQTEEVVKVIARVVQQDN 334

Query: 347 ---------------KEVKINIPLVMRLEGANVDIGNRLIA 372
                          ++V+   PLV+RL G+  +   + +A
Sbjct: 335 SELESQVVRSNGSKSRQVQNFTPLVIRLAGSEFNAARKYLA 375


>gi|308803326|ref|XP_003078976.1| succinyl-CoA-ligase beta subunit (ISS) [Ostreococcus tauri]
 gi|116057429|emb|CAL51856.1| succinyl-CoA-ligase beta subunit (ISS) [Ostreococcus tauri]
          Length = 203

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 102/177 (57%), Gaps = 4/177 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ   ++ K  V V  GV  +++   ++A   L G   VVKSQI AGGRG G F 
Sbjct: 24  LNVHEYQGAEIMMKNGVRVPIGVACATLDDVDAACDALRGREVVVKSQILAGGRGLGTF- 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +   GGV V +  ++  +   ++LG TL+TKQ+GP G  VN +YV +   + RE+Y 
Sbjct: 83  --ASGFAGGVHVVAKTEAR-ATAEKMLGGTLVTKQSGPAGKPVNVLYVAEKLKLTREMYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +L++DR S     IAS +GG  IE++A   P+KI K+ +D + G+T      L + L
Sbjct: 140 ALMLDRASAGPLVIASAEGGTSIEDLAATQPEKIIKMRLDIVKGMTRPQADELVEKL 196


>gi|300868661|ref|ZP_07113273.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oscillatoria
           sp. PCC 6506]
 gi|300333355|emb|CBN58465.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oscillatoria
           sp. PCC 6506]
          Length = 419

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 198/450 (44%), Gaps = 85/450 (18%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG--- 57
           M++ EYQAKAL R+  +PV     I   +  +     +P P+ V+KSQ+ AGGRG+    
Sbjct: 1   MDLLEYQAKALFREMAIPVLPSQRID--YPTDLKGLKIPYPV-VLKSQVRAGGRGRAGGI 57

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +F E   D+    +   +L  ++ +  E+L                     E   D  +E
Sbjct: 58  KFVENTIDAVAAAQTIFNL-PIMDEYPEVL-------------------LAEAKYDADQE 97

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL++L+D  +     + S QGG+++E       Q I      P           L   +
Sbjct: 98  LYLAVLLDPVARRPVLLGSKQGGINVEAAIAQMQQVIVDQDFSPFYA------RRLTLKM 151

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            LQG        +   +Y+ F +KD+ L+EINPL I ++G +  LD K++ +D AL RHL
Sbjct: 152 GLQGGLIQSVSAIVEKMYQLFVEKDLDLVEINPLGISRSGEVMALDGKVTANDEALGRHL 211

Query: 238 DIQEL----------------------------------------RDVSEEDSREIEAKQ 257
           D+  L                                        R   + +S   +   
Sbjct: 212 DLAGLVGKKQFGSRGNIERGSGARASGEVSHSSVSGLRRYDSNVGRSPLDANSNPQQPIS 271

Query: 258 HN-LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD-------QDKVA 309
           H+ L+ + L+GNIG + NG GL MAT+D +    G PANFL++G           ++++ 
Sbjct: 272 HSQLNLVELEGNIGILCNGIGLTMATLDAVTHAKGKPANFLNLGSFERYELTDTLRERLE 331

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK---EVKINIPLVMRLEGANVDI 366
              ++++ D SVK +L+NI G +   + +   I + ++       N  +V+RL G  +D 
Sbjct: 332 RGLELVSQDKSVKVVLVNILGSVAAGEEMTLAIATYLERKARANRNPQIVLRLVGDQLDT 391

Query: 367 GNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
               +A  GL++  A  LD+A  + V   K
Sbjct: 392 TKERLA--GLSLQLAEKLDEAVAQAVSLAK 419


>gi|312797177|ref|YP_004030099.1| succinyl-CoA synthetase beta chain [Burkholderia rhizoxinica HKI
           454]
 gi|312168952|emb|CBW75955.1| Succinyl-CoA synthetase beta chain (EC 6.2.1.5) [Burkholderia
           rhizoxinica HKI 454]
          Length = 200

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 10/157 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVTVPRGKPAFSVDEAVKVAEELGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYSNQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
            L+VDR S  V  +AS++GGMDIEEVA   P+ I +L
Sbjct: 111 GLVVDRISQKVVLMASSEGGMDIEEVAAKTPELIIRL 147


>gi|169610772|ref|XP_001798804.1| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15]
 gi|160702150|gb|EAT83662.2| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15]
          Length = 661

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 18/285 (6%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL +  DR++   + IA+               +++ ++  D   G T E ++     L+
Sbjct: 374 YLGISPDRSARSPSIIAAPTAN------PSQLHKRVIRIPFDYRTGPTPEVISRAIAHLQ 427

Query: 179 LQG---QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           L     +A+    +L  +L+  +   +   L +   +      + V +    FDD A   
Sbjct: 428 LDAAPPRAKTQTVELINSLWSMYTATEAIDLHVRLAVSSAADEIAVYEPYFFFDDAAFKS 487

Query: 236 HLDIQELRDVSEEDSR-EIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIK-- 287
           +     L     + S  ++EA+   + Y+ L      G +G +VNGAGLAM T D++   
Sbjct: 488 NKRQSALHAKRTQPSDIDLEAENAGIVYVPLGPEGEKGLVGTLVNGAGLAMNTNDVLNSR 547

Query: 288 -LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
            +     ANFLD GG A    ++ +FK+I SD  VK + +NIFGG+  CD++ +GI+ A 
Sbjct: 548 LMPHTQSANFLDTGGKATSSTISTSFKLILSDPRVKVVFVNIFGGLTLCDMIAEGIILAF 607

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           KEV +  P+V+RL G N + G R++ E+ L +      ++A +K+
Sbjct: 608 KEVGVRKPVVVRLRGTNEEKGGRVLEEAKLPIHAFDGFEEAVEKV 652


>gi|15606514|ref|NP_213894.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
 gi|2983723|gb|AAC07285.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
          Length = 436

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 182/403 (45%), Gaps = 54/403 (13%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M+++EY+A   + +KY +P  K + +  +           G   VVKSQ+  G RGK   
Sbjct: 1   MDLYEYEAYDKIFKKYGIPTPKYMFVEHITDDVVEFVNQLGEC-VVKSQVLVGKRGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G VRV S+    + +I  +L  T+  +   P G     V V + A+IL+ELY
Sbjct: 58  --------GAVRVCSNPDEALEEIETLLRMTVYGEM--PVG-----VLVVEKANILKELY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            S++            S +GGMDIEEV    P K+    I+PL G+    V +   +LEL
Sbjct: 103 ASIVYSTDHRAPVLTLSLEGGMDIEEVP---PDKVKSWPINPLKGLYPHMVRNY--LLEL 157

Query: 180 QGQARI-----DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDN 231
                         ++   ++ AF   +  LLEINPL I+  G    +  LD+ +  DD+
Sbjct: 158 GFPHEYMPVLRKLSEVIARMWDAFWGAEARLLEINPLAIVDRGGKPDVLALDAVVKIDDD 217

Query: 232 ALYRHLDIQELRDV--SEEDSREIEAKQHNL--------SYIALDGNIGCMVNGAGLAMA 281
           A      I  +R         REI A + +         SY+ LDG+I  M  G G +  
Sbjct: 218 ASIPPAKIYGVRTALRRPPTEREIAAAEIDKDDHRGKAGSYVELDGDIAMMTFGGGGSTV 277

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI---MRCDV- 337
           T++     G  PAN  D+GG    +K+    +II S   ++ +LI   GG     R DV 
Sbjct: 278 TIETCYELGLKPANLTDIGGNPPAEKMYKITRIILSKPGIRAVLIA--GGTANNTRIDVT 335

Query: 338 LVKGILSAVKEVK------INIPLVMRLEGANVDIGNRLIAES 374
           L +G+ +A++++K       N   V+R  G   + G R++ E+
Sbjct: 336 LGEGVANALRDLKKEGKLDPNWIFVVRRNGPEAEKGLRMLYEA 378


>gi|167945875|ref|ZP_02532949.1| succinyl-CoA synthase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589124|gb|ABG77071.1| succinyl CoA ligase beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 172

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 10/126 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV +G  +SS   A +A + L G +++VK+Q H GGRGK    
Sbjct: 1   MNLHEYQAKKLFADYGIPVPEGKTVSSPSDARAAAQELGGEVWLVKTQAHTGGRGK---- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  SL  V +    ILG TL+TKQTGP G  VN V VE G+DI RELYL
Sbjct: 57  ------AGGVTLAKSLDEVEAAAEAILGMTLVTKQTGPEGLPVNLVLVEQGSDIARELYL 110

Query: 121 SLLVDR 126
             L+DR
Sbjct: 111 GALLDR 116


>gi|331667093|ref|ZP_08367958.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
 gi|331065449|gb|EGI37342.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
          Length = 145

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 10/145 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEE 145
             +VDR+S  V F+AST+GG++IE+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEK 135


>gi|21410180|gb|AAH30947.1| Suclg2 protein [Mus musculus]
          Length = 115

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 74/103 (71%)

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DII L GG PANFLD+GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI 
Sbjct: 1   DIIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGIT 60

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            A +E+++ +PLV+RLEG NV     ++  SGL + +A+DL+D
Sbjct: 61  KACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 103


>gi|149049948|gb|EDM02272.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit (predicted)
           [Rattus norvegicus]
          Length = 234

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 3/219 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 11  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFT 70

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 71  ---SGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGAKGRICNQVLVCERKYPRREYYF 127

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  +D + GV  E   +L   +   
Sbjct: 128 AITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVKEPVDIIEGVKKEQAVTLAKKMGFP 187

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
                   +    LY  F   D +++EINP++   +G++
Sbjct: 188 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKV 226


>gi|209524798|ref|ZP_03273344.1| Succinate--CoA ligase (ADP-forming) [Arthrospira maxima CS-328]
 gi|209494677|gb|EDZ94986.1| Succinate--CoA ligase (ADP-forming) [Arthrospira maxima CS-328]
          Length = 381

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 45/407 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L R+  +PV     I   H  +    T+P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYQAKTLFRQMAIPVLPSQRIDFAHDLKGL--TIPYPV-VLKSQVRAGGRGKAGGI 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +          VE+++ +V +   + + +  I  +          +  E   D  +E+YL
Sbjct: 58  KF---------VENTIDAVAA--AQCIFNLAIQDEYP------QVLLAEAKYDADQEVYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D  +     + S QGG+++E       + +      P           L   + LQ
Sbjct: 101 AVILDPVTRRPLLLGSVQGGVNVEATMFHIQKVVVDQEFSPFYA------RRLTVKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI- 239
               +   ++   +Y+ F +KD+ L+EINPL I   G L  LD K+  ++ AL RH D+ 
Sbjct: 155 EHHVLSVSNILEKMYRLFVEKDLDLVEINPLGISSTGELMALDGKVVANNQALERHPDLV 214

Query: 240 ----QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
               ++  D S  +  ++   Q N  ++ LDGNIG + NGA L M T+D I    G PAN
Sbjct: 215 LLVNEQCSDTSAIEPTDLPTNQPN--FVELDGNIGIICNGAALTMTTLDQIIATKGKPAN 272

Query: 296 FLDVGGGADQDKVAAAFK-------IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
           F ++GG    D      +       ++ +   +K ++IN  G     D L + I + ++ 
Sbjct: 273 FFNLGGEDHFDLTETLLQNFYEGLTLVMASDRIKVVMINWLGHQTTTDQLAEAIANFLQR 332

Query: 349 VKIN--IP-LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
              +  +P  V+RL+    +  + L   + L V    + DDA ++ V
Sbjct: 333 QNQSNTLPHFVLRLQVTEPE--SNLAKFADLPVEIVANFDDAVKRTV 377


>gi|71006788|ref|XP_758051.1| hypothetical protein UM01904.1 [Ustilago maydis 521]
 gi|46097552|gb|EAK82785.1| hypothetical protein UM01904.1 [Ustilago maydis 521]
          Length = 400

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 18/216 (8%)

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           + G A  +  ++   ++K F   +        +    +  ++V+   + FDD A+ R   
Sbjct: 161 VHGLASKEAQNVIAAMWKVFDQYEGLWFSFTLVPAQGDTEVKVVAPYMEFDDFAVRRQPL 220

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL------------------DGNIGCMVNGAGLAM 280
           ++   +     +    A+   L ++ L                  +GNIGC   GAG AM
Sbjct: 221 LKPYFESRPRHTNTARAEDSGLFFVKLSDVDAPTLTQASDGKELPEGNIGCFGYGAGNAM 280

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK 340
           ATMD + + GG PANFLD GGGA++     A + +  D +VK I IN FGGI R D++ +
Sbjct: 281 ATMDGLNVAGGRPANFLDGGGGANRTNAKLAVETLNRDPAVKAIFINTFGGITRTDIVSQ 340

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           GI+ AVK+ KI  P+V+R++G   +   +++  SGL
Sbjct: 341 GIIDAVKDDKITKPIVVRMKGTGSEDAAKVLQASGL 376


>gi|289679951|ref|ZP_06500841.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae FF5]
          Length = 93

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 74/92 (80%)

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
           ++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLEG N +
Sbjct: 1   ERVTEAFKIILSDANVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAE 60

Query: 366 IGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 61  LGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 92


>gi|284052711|ref|ZP_06382921.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Arthrospira
           platensis str. Paraca]
 gi|291567703|dbj|BAI89975.1| succinyl-CoA synthetase beta chain [Arthrospira platensis NIES-39]
          Length = 381

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 191/409 (46%), Gaps = 49/409 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L R+  +PV     I   H  +    T+P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYQAKTLFRQMAIPVLPSQRIDFAHDLKGL--TIPYPV-VLKSQVRAGGRGKAGGI 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +          VE+++ +V +   + + +  I  +          +  E   D  +E+YL
Sbjct: 58  KF---------VENTIDAVAA--AQCIFNLAIQDEYP------QVLLAEAKYDADQEVYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D  +     + S QGG+++E       + +      P           L   + LQ
Sbjct: 101 AVILDPVTRRPLLLGSVQGGVNVEATMFHIQKVVVDQEFSPFYA------RRLMVKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI- 239
               +   ++   +Y+ F +KD+ L+EINPL I   G L  LD K+  ++ AL RH D+ 
Sbjct: 155 EHLILSVSNILEKMYRLFVEKDLDLVEINPLGISSTGELMALDGKVVANNQALERHPDLV 214

Query: 240 ----QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
               ++  D +  +  ++   Q N  ++ LDGNIG + NGA L M T+D I    G PAN
Sbjct: 215 MLVHEQCSDPAAIEPTDLPTNQPN--FVKLDGNIGIICNGAALTMTTLDQIIATKGKPAN 272

Query: 296 FLDVGGGADQDKVAAAF---------KIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
           FL++ GG D  +V              ++ SD  +K ++IN  G     D + + I + +
Sbjct: 273 FLNL-GGEDHFEVTETLLQNLSDGLTSVMASD-RIKVVMINWLGHQTTADQIAEAIANFL 330

Query: 347 KEVKI--NIP-LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +  K    +P  V+RL    ++  + L   +GL V     LD+A ++ V
Sbjct: 331 QHQKTIETLPHFVLRLTVTELE--STLAKFAGLPVEIVATLDEAVKRTV 377


>gi|294930372|ref|XP_002779544.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239888857|gb|EER11339.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 237

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 6/223 (2%)

Query: 1   MNIHEYQAKALLR-KYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           ++ HEYQ+  LL  +++V  V K     + +  E   + L G   VVK+Q+  GGRG+G 
Sbjct: 19  LHFHEYQSMNLLHHQFHVDAVPKCFYARNSNEVEDYARRLGGGDVVVKAQVLGGGRGRGH 78

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FKE     +GGV + SS         ++L  +L+T+QTG +G     V + +   I+ E 
Sbjct: 79  FKE--NGFQGGVHIASSPSEARIVAEQMLNKSLVTRQTGLSGRTCKGVLLCEKLPIVAEK 136

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++++DR  G    + S  GGM IEEVA ++P  + K+ ID   G+T+       + L 
Sbjct: 137 YFAIMLDRGLGGPVMVMSKHGGMSIEEVAIEHPDAVTKIPIDVTTGLTTRQAEEAVEHLG 196

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
             G            LY+ F   D ++LE+NPL  +++GR+ V
Sbjct: 197 FNGDP--SAMATLKGLYRTFVGADCTMLEVNPLAELEDGRIMV 237


>gi|189205729|ref|XP_001939199.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975292|gb|EDU41918.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 720

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 47/318 (14%)

Query: 119 YLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDM 176
           YL +   R++   + IA+ T     + +  + +P   F     P  G  ++ +A L  D 
Sbjct: 407 YLGISPHRSNRSPSIIAAPTANPSQLNQRVRRFP---FDYRSGPSAGAIADAIAHLQLDA 463

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +A++    L  NL+  + +K+     +N  + + +  L +    + FDD A    
Sbjct: 464 APPKAKAQVV--QLIHNLWTLYTEKEAIDAHVNLALSVDDDELLIYSPYLFFDDAAFKSG 521

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIAL-----------------------DGN-- 268
            R   +  LRD +   + + +A+   + Y+ L                       DG   
Sbjct: 522 KRQAHLHALRDEASISATDQQAEDAGIVYVPLASPVFPTGTRQKGTQTSPSSAAKDGPRN 581

Query: 269 -IGCMVNGAGLAMATMDIIKLYGGAP------ANFLDVGGGADQDKVAAAFKIITSDSSV 321
            +G +VNGAGLA+ T+D +     AP      ANFLD GG A  D +  +FK++ SD  V
Sbjct: 582 LVGTLVNGAGLALNTIDTLSARLSAPPHATSAANFLDTGGKATSDTIKTSFKLVLSDPRV 641

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
             + +NIFGG+  CD++ +GI+ A KE+ +  P+V+RL G N   G +++ ++ L +   
Sbjct: 642 GVVFVNIFGGLTLCDMIAEGIILAFKELDVKKPVVVRLRGTNEAKGQKVLEDAKLPIHAF 701

Query: 382 IDLDDAAQKI-----VHA 394
            D ++A +K+     VHA
Sbjct: 702 DDFEEAVKKVGELANVHA 719


>gi|270668481|ref|ZP_06222536.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
 gi|270316678|gb|EFA28470.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
          Length = 112

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 82/103 (79%)

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P
Sbjct: 8   NFLDVGGGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVP 67

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +V+RLEG N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 68  VVVRLEGTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 110


>gi|324537082|gb|ADY49489.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 159

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 1/156 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL  Y   + + +V SS   AE  ++      Y+VKSQ+ AGGRGKGRF 
Sbjct: 2   LNLQEYQSKKLLEDYGCCIQRFIVASSRDEAEQQMQDFNRRRYMVKSQVLAGGRGKGRFI 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  GGV V    +  +S + E++G  L+TKQTG  G  V  V + +   I RE YL
Sbjct: 62  GGRSDL-GGVAVAEGKQKALSLVEEMVGKILVTKQTGKKGLPVKKVLICEAVSIKRETYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK 156
           ++L+DR +     + S  GGMDIE VA   P+ +FK
Sbjct: 121 AILMDRETNGPMVVYSPAGGMDIETVAATNPELVFK 156


>gi|119493952|ref|ZP_01624513.1| succinyl-CoA synthetase beta chain [Lyngbya sp. PCC 8106]
 gi|119452309|gb|EAW33504.1| succinyl-CoA synthetase beta chain [Lyngbya sp. PCC 8106]
          Length = 392

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 169/369 (45%), Gaps = 47/369 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L R+ ++PV     I    A +     +P P+ V+KSQ+ +GGRGK    
Sbjct: 1   MDLLEYQAKTLFREKDIPVLPSQRID--RAPDVKGLRIPYPV-VLKSQVRSGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    ++  + I    L  +   P        Y  D     +E YL
Sbjct: 55  -------GGIRFVENTIDAVAAAQAIFN--LPIRDEYPKVLLAEAKYNAD-----QEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D +S     + ST+GG+ +EE   +  Q    +++D     +S     L   + L 
Sbjct: 101 AVTLDSSSRRPVMLGSTKGGVAVEEAISEVQQ----VVVDQ--EFSSFYARRLSVKMGLH 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD-- 238
               +    +   +Y  F +KD+ L+EINPL I  +G +  LD K+  +DNAL RH D  
Sbjct: 155 QDLILAVSAIIEKMYCLFVEKDLDLIEINPLGINPSGEVMALDGKVIVNDNALGRHRDLA 214

Query: 239 --IQELRDVSEEDSREI----------EAKQHNLSYIALDGNIGCMVNGAGLAMATMDII 286
             IQ  ++ ++    ++            +   L  + L+GNIG + NGA + + T+D+I
Sbjct: 215 ALIQNHQNPAKASLTDVYSFPFPAQFDRVQLRELKMVELEGNIGILSNGADMTLTTVDLI 274

Query: 287 KLYGGAPANFLDVG-------GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
               G PAN+LD+          A  D +    ++++    VK +++N+   ++     +
Sbjct: 275 IQAKGKPANYLDLEVEDYSELTEAWCDHLYQGLELVSQSKQVKVVIVNLLSHVVSSQKTI 334

Query: 340 KGILSAVKE 348
             I S +++
Sbjct: 335 LEIASYLQK 343


>gi|56757245|gb|AAW26794.1| SJCHGC05557 protein [Schistosoma japonicum]
          Length = 177

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 100/179 (55%), Gaps = 4/179 (2%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  + T QTG +G   N +   +     RE YL++++DR+SG    +   QGG++IE+
Sbjct: 1   MLGHRIFTAQTGDSGQLCNTLLACERKYSRREHYLAIVLDRSSGGPVMVGCKQGGVNIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF-PNLYKAFCDKDMS 204
           +A+D P  + K+ ID   G+  +D   +   L   G +  D   ++   LYK F   D +
Sbjct: 61  IARDNPDALIKIPIDIDKGLDKKDAVMMAHKL---GFSHSDEAAVYIERLYKLFDSTDCT 117

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           LLEINP+    NG +  +D K++FDDNA +R  +    RD S+ED R+++A    L+YI
Sbjct: 118 LLEINPISQDINGHVICMDCKMNFDDNAAFRQKENFAQRDWSQEDERDVKATNAGLNYI 176


>gi|294945953|ref|XP_002784891.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
 gi|239898169|gb|EER16687.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
          Length = 116

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 82/115 (71%), Gaps = 1/115 (0%)

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           MD++ + GG+PANFLD+GG    ++V  A  II SDS+VK +LINIFGGI++CDV+ +GI
Sbjct: 1   MDLLSVKGGSPANFLDIGGSVGVEEVKTALGIINSDSNVKSVLINIFGGIVKCDVVAEGI 60

Query: 343 LSAVKEVKIN-IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + A +E+ I+  P+V+RL G NV+ G  ++A++GL+     DL++AA K V   K
Sbjct: 61  VRAAQELSIDHKPIVVRLVGTNVERGKSILAQAGLDYYAIDDLNEAAIKAVELSK 115


>gi|170671381|gb|ACB29534.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671383|gb|ACB29535.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671385|gb|ACB29536.1| succinyl-CoA synthetase [Alteromonas macleodii ATCC 27126]
 gi|170671387|gb|ACB29537.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671389|gb|ACB29538.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671391|gb|ACB29539.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671393|gb|ACB29540.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671395|gb|ACB29541.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671397|gb|ACB29542.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671399|gb|ACB29543.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671401|gb|ACB29544.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671403|gb|ACB29545.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671405|gb|ACB29546.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671407|gb|ACB29547.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671409|gb|ACB29548.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671411|gb|ACB29549.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671413|gb|ACB29550.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671415|gb|ACB29551.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671417|gb|ACB29552.1| succinyl-CoA synthetase [Alteromonas macleodii]
          Length = 132

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 77/128 (60%)

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   DI  ELYL  +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G    
Sbjct: 1   ESCTDIANELYLGAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPY 60

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L L G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  
Sbjct: 61  QAREMAFALGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGI 120

Query: 229 DDNALYRH 236
           D NALYR 
Sbjct: 121 DGNALYRQ 128


>gi|170671419|gb|ACB29553.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671421|gb|ACB29554.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671423|gb|ACB29555.1| succinyl-CoA synthetase [Alteromonas macleodii]
          Length = 132

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 77/128 (60%)

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   DI  ELYL  +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G    
Sbjct: 1   ESCTDIANELYLGAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPY 60

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L L G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  
Sbjct: 61  QAREMAFKLGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGI 120

Query: 229 DDNALYRH 236
           D NALYR 
Sbjct: 121 DGNALYRQ 128


>gi|270643364|ref|ZP_06222156.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
 gi|270317286|gb|EFA28848.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
          Length = 103

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 80/101 (79%)

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V
Sbjct: 1   LDVGGGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVV 60

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +RLEG N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 61  VRLEGTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 101


>gi|296531478|gb|ADH29874.1| MIP20559p [Drosophila melanogaster]
          Length = 263

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 3/210 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 34  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 94  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 151 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           G        +  NLY  F  KD  L+EINP
Sbjct: 211 GDGEDTHVQMLLNLYDLFVKKDALLVEINP 240


>gi|255633622|gb|ACU17170.1| unknown [Glycine max]
          Length = 172

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 8/150 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGP-LYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ K+ V V +GV +SSV  A   IK L P     VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPNENELVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           FK   +  KGGV +  + +  + DI  ++LG  L+TKQTGP G  V+ VY+ +   ++ E
Sbjct: 88  FK---SGLKGGVHIVKTDQ--VEDIAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVA 147
           +Y ++ +DRTS     IA ++GG  IE++A
Sbjct: 143 MYFAITLDRTSAGPIIIACSKGGTSIEDLA 172


>gi|170671425|gb|ACB29556.1| succinyl-CoA synthetase [Alteromonas macleodii]
          Length = 132

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 76/128 (59%)

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   DI  ELYL  +VDRT+  V  +AST+GG++IE VA++ P+KI K  IDP++G    
Sbjct: 1   ESCTDIANELYLGAVVDRTTRCVVSMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPY 60

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L L G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  
Sbjct: 61  QAREMAFALGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGI 120

Query: 229 DDNALYRH 236
           D NALYR 
Sbjct: 121 DGNALYRQ 128


>gi|254410665|ref|ZP_05024444.1| ATP-grasp domain family [Microcoleus chthonoplastes PCC 7420]
 gi|196182871|gb|EDX77856.1| ATP-grasp domain family [Microcoleus chthonoplastes PCC 7420]
          Length = 417

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 36/340 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL R+  +PV     I   H  +     +P P+ V+KSQ+          K
Sbjct: 1   MDLLEYQAKALFREIGIPVLPSQCID--HPRDLKQLDIPYPV-VLKSQVP---------K 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                + G   VE+++ + I+  R I   +++       G   N +  E   D  +E YL
Sbjct: 49  GGRGRAGGIRTVENTIDA-IATARAIFNLSIL-------GKYPNVLLAESHYDAEQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D T      + S QGG+ +E V     + + +    P           L   + LQ
Sbjct: 101 AVILDYTLRRPVLLGSCQGGIHVENVMAQMQRVVVEEDFSPFYA------RRLAFKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y+    KD+ L+EINPL +  N  +  LD KI+ +D+AL R  ++ 
Sbjct: 155 GDLIESVSDIVQKMYQLLIQKDLDLVEINPLGVSANHEVMALDGKIAVNDHALGRQSELA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L   S   + +   +  +L +    GNIG + N   LA AT+D++    G PA+ L V 
Sbjct: 215 NLAS-SLTHTPQPADQPTDLQWTDSQGNIGILCNSPCLAAATLDLVYKAKGKPASCLIVD 273

Query: 301 GGADQDKVAAAFKI---------ITSDSSVKGILINIFGG 331
           G A  D  +AA  +         +T   +++ +L+NI   
Sbjct: 274 GYASWDVPSAASPVQQLQNALQQLTDTQNIQVVLVNILSN 313


>gi|119510291|ref|ZP_01629427.1| succinyl-CoA synthetase beta chain [Nodularia spumigena CCY9414]
 gi|119465035|gb|EAW45936.1| succinyl-CoA synthetase beta chain [Nodularia spumigena CCY9414]
          Length = 408

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 180/429 (41%), Gaps = 57/429 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I   H  +     +  P+ V+KSQ++ G R K    
Sbjct: 1   MDLLEYQVKEWFGKIGIPVLPSQRID--HPTDLKRLKIRYPI-VLKSQVYTGERAKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR   +    I+  + I    +        G     +  E      +E YL
Sbjct: 55  -------GGVRFVETTIDAIAAAQTIFNLPI-------WGELPEVLLAESKYIGEQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + ST+  +D E   +     + +    P           L   + L+
Sbjct: 101 AVVLDTAVCRPVLLGSTEPDIDWESAGEKMHHVVVEQEFSPFYA------RRLALKMGLK 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F  KD+ L+EINPL +  +G++  L+ K+S ++ A+ RH D+ 
Sbjct: 155 GTLMQSVSSVVEKMYQLFVQKDLDLVEINPLAVSASGQVMALNGKVSINERAIGRHRDLA 214

Query: 241 ELR-DVSEEDSR-EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL- 297
           E+   ++   SR  +     +   + L G IG + NG G  MAT+D++   GG   + L 
Sbjct: 215 EIAVKIANRQSRSSVNGHLGDWDGLELHGKIGILGNGTGSIMATLDLVTSAGGKAGSCLN 274

Query: 298 -------DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
                  DV       ++A    I+ +D S++ IL+N+ G + + + + + I + V+  K
Sbjct: 275 LRHALVTDVSPTTFCSRLAKGLNILAADKSIQVILLNLLGSVPQTEEVAQIISNFVQHDK 334

Query: 351 INI------------------PLVMRLEGANVDIGNRLIA--ESGLNVITAID-LDDAAQ 389
             I                  PLV+R+ G+  D+    +A   +  + +T ++ LD+A  
Sbjct: 335 SEIKSPTVRPSSKTRRESHFPPLVVRITGSEFDVAKDFLATLNTQADALTVVENLDEAVA 394

Query: 390 KIVHAVKGV 398
             V   K +
Sbjct: 395 AAVRLAKPI 403


>gi|167465542|ref|ZP_02330631.1| succinyl-CoA synthetase, beta subunit [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 80

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 64/80 (80%)

Query: 317 SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           SD  VKG+ INIFGGIMRCDV+ KG+++AVKE+ ++ PLV+RLEG NV++G +++ ESGL
Sbjct: 1   SDEKVKGVFINIFGGIMRCDVIAKGVVAAVKELGLDRPLVVRLEGTNVELGQQILNESGL 60

Query: 377 NVITAIDLDDAAQKIVHAVK 396
           N++ A  + D AQKIV  V+
Sbjct: 61  NIVAADSMADGAQKIVSLVQ 80


>gi|329727816|gb|EGG64267.1| CoA-ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 87

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 65/85 (76%)

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLEG NV++G +++
Sbjct: 1   FKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKIL 60

Query: 372 AESGLNVITAIDLDDAAQKIVHAVK 396
            +SGL +  A  + + AQKIV  VK
Sbjct: 61  KDSGLAIEPAATMAEGAQKIVKLVK 85


>gi|319414081|gb|ADV52238.1| succinate dehydrogenase [Chortoicetes terminifera]
          Length = 80

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 60/80 (75%)

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINPL     G +  +D+KI FDDNA +R  +I EL + +E D RE++A ++NL+YI +
Sbjct: 1   VEINPLAETAEGNVVAVDAKIQFDDNAKFRQREIFELDNTTETDPREVQAAKYNLNYIGM 60

Query: 266 DGNIGCMVNGAGLAMATMDI 285
            GNIGC+VNGAGLAMATMDI
Sbjct: 61  SGNIGCLVNGAGLAMATMDI 80


>gi|251772178|gb|EES52748.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 416

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 155/354 (43%), Gaps = 62/354 (17%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M ++E++A  A+ +KY +PV + +  + ++ A    ++  PG   VVKS +  G RGK  
Sbjct: 1   MKLYEHEALGAIFKKYKIPVPRYIFATDMNDAVNQFVEKEPG--VVVKSMVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V+V S    V   +R+     L T++    G +     VE+  DI +E 
Sbjct: 58  ---------GAVKVVSDKAKVPDVVRD-----LATREV--YGEKSIGALVEEKLDIEKEF 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKD-------------YPQKIFKLLIDPLIGV 165
           YLS+         A I S  GGMD+EE+                YP +I + L    IG 
Sbjct: 102 YLSVTYSTKDRAPAIIFSEHGGMDVEEIDPKLIHTHVISDVRSVYPYQIRQFLTG--IGF 159

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL--- 222
           + +D+                  ++  N+Y AF   +  LLEINPL++ ++G  R +   
Sbjct: 160 SDKDLLRPLS-------------EVIVNVYHAFVGAECRLLEINPLVVARSGDKRKIVAA 206

Query: 223 DSKISFDDNALYRHLDIQELRDVS-------EEDSREIEAKQHNL---SYIALDGNIGCM 272
           D+ +  DD+A      +   R          E+D+  I+   H     SY+ L+G+I  M
Sbjct: 207 DAVVILDDDASVNPAVVYGARSAQGRPMTQREQDAILIDQGDHRGKAGSYVELEGDIAMM 266

Query: 273 VNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
             G G +  T +     G   AN  D+GG    +K+    +II S   +KG+L+
Sbjct: 267 TFGGGGSTVTAETAIEAGLRIANLTDIGGNPPAEKMYRISRIILSKPGIKGVLV 320


>gi|119617915|gb|EAW97509.1| hCG1791842, isoform CRA_b [Homo sapiens]
          Length = 293

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 3/177 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E Q+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 34  LSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFN 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  K GV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 94  ---SGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           ++L+D++      + S Q G+DIEEVA   P+ IFK  ID   G+       + + L
Sbjct: 151 AILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENL 207



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           S V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+ LEG NV     ++  S L +
Sbjct: 215 SQVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPI 273

Query: 379 ITAIDLDD 386
            +A+DL+D
Sbjct: 274 TSAVDLED 281


>gi|76162633|gb|AAX30586.2| SJCHGC05313 protein [Schistosoma japonicum]
          Length = 115

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 63/90 (70%)

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +V  AF++ITSD  V  IL+NIFGGIMRCD++ +GI++A  E+ I +P+++RL
Sbjct: 1   GGGATATQVTEAFRLITSDPKVNAILVNIFGGIMRCDIIAQGIVAAATELNIKVPIIVRL 60

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           +G  V+    +IA S + ++   DLD+AA 
Sbjct: 61  QGTRVEDAKAIIATSHMKILGCSDLDEAAH 90


>gi|307153608|ref|YP_003888992.1| Succinate--CoA ligase (ADP-forming) [Cyanothece sp. PCC 7822]
 gi|306983836|gb|ADN15717.1| Succinate--CoA ligase (ADP-forming) [Cyanothece sp. PCC 7822]
          Length = 420

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 57/351 (16%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EY AK L  +  +PV     I      E     +P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYHAKELFDEVGIPVLPSQPIHD--TGELKRLQIPYPV-VLKSQVRAGGRGKS--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    I+  R I    ++       G     +  E   D   E +L
Sbjct: 55  -------GGIRFVENTIDAIAAARAIFSLPIL-------GEYPEVILAEARYDAQEEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL--------IGVTSEDVAS 172
           ++++D        + S +GGMD+E + +   + + +    P         +G+    + S
Sbjct: 101 AVVLDYQLQRPVLLGSVKGGMDVEALLEYMQRVVIEEEFSPFYARRLVKKMGIAEGLIES 160

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  ++E               +Y  F +KD+ L+EINPL +   G +  LD KIS +D A
Sbjct: 161 VSTIIE--------------KMYYLFWEKDLDLIEINPLGVNAQGEVMALDGKISVNDCA 206

Query: 233 LYRHLDI--------QELRDVSEEDS-REIEA--KQHNLSYIALDGNIGCMVNGAGLAMA 281
           L RH ++          L+  +EE++ R+ E     H L  +   GN+G + N  GLA+ 
Sbjct: 207 LDRHPELACLICSKKDYLQGAAEENALRDCETVVDLHWLEGVDELGNVGIICNSHGLALT 266

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI----ITSDSSVKGILINI 328
           T D+I    G P   L +  G+D   ++   ++    +   S++K +L+NI
Sbjct: 267 TWDLIVQAQGKPNYCLILEEGSDCPSLSQQLELGLEQMMELSALKAVLVNI 317


>gi|153820617|ref|ZP_01973284.1| succinyl-CoA synthetase beta chain [Vibrio cholerae NCTC 8457]
 gi|126508840|gb|EAZ71434.1| succinyl-CoA synthetase beta chain [Vibrio cholerae NCTC 8457]
          Length = 148

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 10/149 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKD 149
             +VDR++  + F+AST+    + +  ++
Sbjct: 111 GAVVDRSTRRIVFMASTEVAWKLRKWQRN 139


>gi|257058438|ref|YP_003136326.1| ATP-grasp domain protein [Cyanothece sp. PCC 8802]
 gi|256588604|gb|ACU99490.1| ATP-grasp domain protein [Cyanothece sp. PCC 8802]
          Length = 418

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 46/359 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVV-KSQIHAGGRGKGRF 59
           M++ EYQAK L  +  +P+     I+++    S IK L  P  VV KSQ+ +GGRGK   
Sbjct: 1   MDLLEYQAKELFHRVGIPILPSQPIANL----SEIKRLQIPYPVVLKSQVRSGGRGKA-- 54

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+R   +    I+  + I    ++       G     +  E   +   E +
Sbjct: 55  --------GGIRFVENTIDAIAAAQAIFSLPIL-------GEYPEVILAEARYNTQAEFF 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLE 178
           L +L D        + S+QGG+++E +       I K+++D   G  S   A  L   + 
Sbjct: 100 LCVLFDYQLQCPVLLGSSQGGIEVENLLSH----IEKVVLD---GEFSPFYARRLAIKMG 152

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+G+       +   +Y+ F +KD+  +EINPL +   G +  LD KI+ +D+AL RH D
Sbjct: 153 LEGKLIHAVSSIIEKMYQLFREKDLDWIEINPLAVSPTGEVMALDGKIAVNDSALPRHQD 212

Query: 239 IQELRDVSEEDSREIEAK-----------QHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           + +L    +  +  +              QH L   +  G +G + N  GLA+ T D++ 
Sbjct: 213 LLDLLTSQQSKASSMTLTSGKAEPWPPILQH-LRSTSSKGEVGIISNSWGLALTTWDLLV 271

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSD----SSVKGILINIFGGIMRCDVLVKGI 342
              G P     +     +  +   F +  +     + ++ ILINI G     + + + I
Sbjct: 272 KQKGKPDCAFVMLEKKPEKSIIEQFSLALAQAMQLTHLQVILINILGSPETAEAIAQAI 330


>gi|218245402|ref|YP_002370773.1| ATP-grasp domain-containing protein [Cyanothece sp. PCC 8801]
 gi|218165880|gb|ACK64617.1| ATP-grasp domain protein [Cyanothece sp. PCC 8801]
          Length = 418

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 155/358 (43%), Gaps = 44/358 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVV-KSQIHAGGRGKGRF 59
           M++ EYQAK L  +  +P+     I+++    S IK L  P  VV KSQ+ +GGRGK   
Sbjct: 1   MDLLEYQAKELFHRVGIPILPSQPIANL----SEIKRLQIPYPVVLKSQVRSGGRGKA-- 54

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+R   +    I+  + I    ++       G     +  E   +   E +
Sbjct: 55  --------GGIRFVENTIDAIAAAQAIFSLPIL-------GEYPEVILAEARYNTQAEFF 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLE 178
           L +L D        + S+QGG+++E +       I K+++D   G  S   A  L   + 
Sbjct: 100 LCVLFDYQLQCPVLLGSSQGGIEVENLLSH----IEKVVLD---GEFSPFYARRLAIKMG 152

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+G+       +   +Y+ F +KD+  +EINPL +   G +  LD KI+ +D+AL RH D
Sbjct: 153 LEGKLIHAVSSIIEKMYQLFREKDLDWIEINPLAVSPTGEVMALDGKIAVNDSALPRHQD 212

Query: 239 IQELRDVSEEDSREIEAKQ----------HNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           + +L    +  +  +               +L   +  G +G + N  GLA+ T D++  
Sbjct: 213 LLDLLTSQQSKASSMTLTSGKAEPWPPILQHLRSTSSKGEVGIISNSWGLALTTWDLLVK 272

Query: 289 YGGAPANFLDVGGGADQDKVAAAFKIITSD----SSVKGILINIFGGIMRCDVLVKGI 342
             G P     +     +  +   F +  +     + ++ ILINI G     + + + I
Sbjct: 273 QKGKPDCAFVMLEKKPEKSIIEQFSLALAQAMQLTHLQVILINILGSPETAEAIAQAI 330


>gi|213418395|ref|ZP_03351461.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 96

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 76/95 (80%)

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLEG 
Sbjct: 1   ATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGN 60

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 61  NAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 95


>gi|294948876|ref|XP_002785939.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900047|gb|EER17735.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
          Length = 116

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 57/76 (75%)

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           ++EINP   +K+GR+ V D+K++FDDN  +R  DI   RD S+ D RE+ A + +L+YI 
Sbjct: 1   MVEINPRAEIKDGRVTVCDAKVNFDDNVQFRQKDIFSRRDASQGDPREVAAFEWDLNYIG 60

Query: 265 LDGNIGCMVNGAGLAM 280
           LDG+IGCMVNGAGLAM
Sbjct: 61  LDGSIGCMVNGAGLAM 76


>gi|254169451|ref|ZP_04876275.1| Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           [Aciduliprofundum boonei T469]
 gi|197621602|gb|EDY34193.1| Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           [Aciduliprofundum boonei T469]
          Length = 165

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 25/165 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EYQ KAL RK+ VP  +G V          IK   G   V+K+Q+  GGRGK    
Sbjct: 3   MNLYEYQGKALFRKFGVPTPEGYVAFK----PEDIKEFEGE-RVIKAQVLTGGRGKS--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  S+L+      R+IL   +        G +V+ V VE+   I +E Y+
Sbjct: 55  -------GGVKFASNLEEARELARQILAMEI-------KGHKVHAVLVEEKLKIEKEFYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           S+L+DR++     +AS +GG++IE V  +   KI+K +++P IGV
Sbjct: 101 SILIDRSTRSPLIMASPEGGVEIESVPDE---KIYKFVVNPEIGV 142


>gi|298490424|ref|YP_003720601.1| ATP-grasp domain-containing protein ['Nostoc azollae' 0708]
 gi|298232342|gb|ADI63478.1| ATP-grasp domain protein ['Nostoc azollae' 0708]
          Length = 405

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 146/344 (42%), Gaps = 40/344 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I   H  +     +  P+ V+KSQ+HA  R K    
Sbjct: 1   MDLLEYQVKEWFGKMGIPVLPSQRID--HPTDLKRLKIRYPI-VLKSQVHADERAKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I+  + I    +        G     +  E   D   E YL
Sbjct: 55  -------GGVRIVETTIDAIAAAQNIFNLPI-------WGELPEVLLAESKYDAKDEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        +   +  +D E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTALCRPVLLGCKESDIDWESPGEKMQYVVVEQEFSPFYA------RRLGLKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y+ F  KD+ L+EINPL +   G++  L+ KI  +  A+ RH +I 
Sbjct: 155 GALMQSVSDIVEKMYQLFVQKDLDLVEINPLAVSAAGQVMALNGKIRVNPRAINRHPEIA 214

Query: 241 ELRDVSEEDSREIEAKQHNL----SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA-- 294
           ++   ++  +R   ++ +N+    + + + G IG + NG G  + T+D +   GG P   
Sbjct: 215 QM--AAKIANRNKISRTNNILGDGNGLGVYGKIGILANGTGSLLTTLDAVFNAGGKPGLS 272

Query: 295 -----NFL-DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI 332
                +FL D       D++A + + + SD S++ ILIN  G I
Sbjct: 273 FNLRHSFLTDTTPNTFCDRLATSLRNLASDKSIQVILINFLGTI 316


>gi|12834797|dbj|BAB23048.1| unnamed protein product [Mus musculus]
          Length = 98

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 59/76 (77%)

Query: 317 SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           SD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+SGL
Sbjct: 1   SDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGL 60

Query: 377 NVITAIDLDDAAQKIV 392
            ++   DLD+AA+ +V
Sbjct: 61  KILACDDLDEAAKMVV 76


>gi|218437307|ref|YP_002375636.1| ATP-grasp domain protein [Cyanothece sp. PCC 7424]
 gi|218170035|gb|ACK68768.1| ATP-grasp domain protein [Cyanothece sp. PCC 7424]
          Length = 416

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 157/363 (43%), Gaps = 57/363 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EY AK L  +  +P+     I      E     +P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYHAKELFHQVGIPILPSQPIHD--PGELKRLHIPYPV-VLKSQVRAGGRGKS--- 54

Query: 61  ELPADSKGGVR-VESSLKSVISDIREILGSTLITKQTGPT-GSRVNCVYVEDGADILREL 118
                  GG+R VE+++ ++ +              T P  G     +  E   +   E 
Sbjct: 55  -------GGIRFVENTIDAIAAARAIF---------TLPIFGEYPEVLLAEARYNAQEEF 98

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL--------IGVTSEDV 170
           +L++++D        + S +GGM+IE + +   + + +    P         +G+    +
Sbjct: 99  FLAIVLDYQLQRPVLLGSPKGGMNIEALLEYMQRVVIEDEFSPFYARRLAKKMGIAENLI 158

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S+  ++E               +Y  F +KD+ L+EINPL + + G +  LD KIS +D
Sbjct: 159 QSVSAIIE--------------KMYYLFIEKDLDLIEINPLGVSQQGEVMALDGKISVND 204

Query: 231 NALYRHLDIQEL----RDVSEEDSREIEAKQHNLSYIALD---GNIGCMVNGAGLAMATM 283
            AL RH ++  L    ++VS E+         NL ++      GN+  + N   LA+   
Sbjct: 205 YALSRHPELVGLTSAKKEVSSENGNGESEPIINLHWLEDSDELGNVAIICNSLDLALMNW 264

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKI----ITSDSSVKGILINIFGGIMRCDVLV 339
            +I    G P+  L +   +    +    ++    IT  S++K IL+NI G     + + 
Sbjct: 265 QLITQEKGKPSYCLILQENSYSPSIPQQLEMGLEKITELSALKVILVNIVGSPEVSETVA 324

Query: 340 KGI 342
           K I
Sbjct: 325 KAI 327


>gi|17231406|ref|NP_487954.1| succinyl-CoA synthetase beta chain [Nostoc sp. PCC 7120]
 gi|17133048|dbj|BAB75613.1| succinyl-CoA synthetase beta chain [Nostoc sp. PCC 7120]
          Length = 408

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 180/442 (40%), Gaps = 79/442 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    +  +PV     I   H  +     +  P+ V+KSQ+HAG R K    
Sbjct: 1   MDLLEYQVKEWFGEIGIPVLPSQRID--HPTDLKRLKIRYPI-VLKSQVHAGEREK---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I+  + I   ++        G     +  E   +  +E YL
Sbjct: 54  ------VGGVRMVETTIDAIAAAQTIFNLSI-------WGELPEVLLAESKYNSHQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + ST+  +D+E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTAVCRPVLLGSTEADIDLELADQKMQYVVVEQEFSPFYA------RRLALKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F  KD+ L+EINPL +   G +  L+ K+  ++ A+ RH +I 
Sbjct: 155 GTLMQSVSTVLEKMYQLFVQKDLDLVEINPLGVNLAGEVMALNGKVGVNERAIGRHPEIA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYI-ALDGN-------IGCMVNGAGLAMATMDIIKLYGGA 292
            +       + +I  + ++ S+    D N       I  + NG G  +AT D++   GG 
Sbjct: 215 AM-------AAKIVPRHYDKSFSNGRDWNNLEKQRRISILGNGTGSILATYDLVASGGGK 267

Query: 293 P--------ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
           P        A   D+      D++      +++D + + ILIN+ G I + +   + I  
Sbjct: 268 PGICLNLRHAAITDLSPTKFGDRLTKGLNTLSADKNTQVILINLLGSIPQPEEAAQAIAQ 327

Query: 345 AVKEVKINIP------------------LVMRLEGANVDIGNRLIA-----ESGLNVITA 381
            +++ K   P                  LV+RL G+ +++   ++A     E GL  I  
Sbjct: 328 FIQQNKGEYPPSIAKSNGKNLSQHQSPQLVIRLAGSELNVAKEVLAALQTREEGL--ILV 385

Query: 382 IDLDDAAQKIV-----HAVKGV 398
            DLD+A    V     HA K V
Sbjct: 386 EDLDEAVATAVRLTKSHAYKKV 407


>gi|296439767|sp|P86226|SUCB1_MESAU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA
          Length = 221

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 101/246 (41%), Gaps = 92/246 (37%)

Query: 89  STLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAK 148
           + LITKQTG  G   N V V +     RE Y ++ ++R+      I S QGG++IE+VA 
Sbjct: 21  AKLITKQTGAKGRICNQVLVCE----RREYYFAITMERSFQGPVLIGSAQGGVNIEDVAA 76

Query: 149 DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI 208
           + P+ I K +     G  S  V S  + +                LY  F          
Sbjct: 77  ENPEAIVKKM-----GFPSNIVDSAAENM--------------IKLYNLFL--------- 108

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
                           KI+FD N+ YR   I +L+D S+ED R                 
Sbjct: 109 ----------------KINFDSNSAYRQ-KIFDLQDWSQEDER----------------- 134

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
                              L+GG PANFLDVGGGA   +V  AFK       V+ IL+NI
Sbjct: 135 -------------------LHGGTPANFLDVGGGATVQQVTEAFK-------VQAILVNI 168

Query: 329 FGGIMR 334
           FGGIMR
Sbjct: 169 FGGIMR 174


>gi|172037272|ref|YP_001803773.1| putative succinyl-CoA synthetase subunit beta [Cyanothece sp. ATCC
           51142]
 gi|171698726|gb|ACB51707.1| putative succinyl-CoA synthetase beta chain [Cyanothece sp. ATCC
           51142]
          Length = 417

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 36/303 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +PV     I+ +   +      P    V+KSQ+H+GGRG+    
Sbjct: 7   MDLLEYQAKELFHQVGIPVLPSQPIAQLSELKHLHIRYP---VVLKSQVHSGGRGRAGGI 63

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
               ++   V    ++ S+      ILG                 +  E   D   E +L
Sbjct: 64  RFVQNTIDAVAAAQAIFSL-----PILGE------------YPEVILAEARYDTQDEFFL 106

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+D        + S +GG+D+E + K     + K+++D   G +      L   + L+
Sbjct: 107 SILLDYQLQRPVLMGSAKGGIDVETLLK----HMHKVILDQ--GFSPFYARRLATKMGLR 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F +KD+ L+EINPL +  +G +  LD KI+ +D AL RHLD+ 
Sbjct: 161 GPLIHGVSTILEKMYQLFIEKDLDLIEINPLAVSASGEVMALDGKITVNDMALSRHLDLL 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD----------GNIGCMVNGAGLAMATMDIIKLYG 290
                  + +  +   Q+ ++               GN+G + NG GL ++T D++    
Sbjct: 221 SFLSPKADQTSSVSPNQNIVTTPPQKPRWLGSKEKGGNVGIIANGLGLTLSTWDLMVNQK 280

Query: 291 GAP 293
           G P
Sbjct: 281 GQP 283


>gi|75908004|ref|YP_322300.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Anabaena
           variabilis ATCC 29413]
 gi|75701729|gb|ABA21405.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Anabaena
           variabilis ATCC 29413]
          Length = 408

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 179/442 (40%), Gaps = 79/442 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    +  +PV     I   H  +     +  P+ V+KSQ+HAG R K    
Sbjct: 1   MDLLEYQVKEWFGEIGIPVLPSQRID--HPTDLKRLKIRYPI-VLKSQVHAGEREK---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I+  + I   ++        G     +  E   +  +E YL
Sbjct: 54  ------VGGVRMVETTIDAIAAAQTIFNLSI-------WGELPEVLLAESKYNSHQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + ST+  +D+E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTAVCRPVLLGSTEADIDLELADQKMQYVVVEQEFSPFYA------RRLALKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F  KD+ L+EINPL +   G +  L+ K+  ++ A+ RH +I 
Sbjct: 155 GTLMQSVSTVLEKMYQLFVQKDLDLVEINPLGVNLAGEVMALNGKVGVNERAIGRHPEIA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYI-ALDGN-------IGCMVNGAGLAMATMDIIKLYGGA 292
            +       + +I  + ++ S+    D N       IG + NG G  +AT D++   GG 
Sbjct: 215 AM-------AAKIIPRHYDKSFSNGRDWNNLEKQRRIGILGNGTGSILATYDLVASGGGK 267

Query: 293 P--------ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
           P        A   D+      D++      + +D + + ILIN+ G I + +   + I  
Sbjct: 268 PGICLNLRHAAITDLSPTKFGDRLTKGLNTLAADKNTQVILINLLGSIPQPEEAAQAIAQ 327

Query: 345 AVKEVKINIP------------------LVMRLEGANVDIGNRLIA-----ESGLNVITA 381
            +++ K   P                  LV+RL G+ ++    ++A     E GL  I  
Sbjct: 328 FIQQNKGEYPPSIAKSNGKNLSQHQSPQLVIRLAGSELNAAKEVLAALQTHEEGL--ILV 385

Query: 382 IDLDDAAQKIV-----HAVKGV 398
            DLD+A    V     HA K V
Sbjct: 386 EDLDEAVATAVRLTKSHAYKKV 407


>gi|31580727|gb|AAP55203.1| succinyl-CoA synthetase beta subunit [Xanthomonas axonopodis pv.
           citri]
          Length = 118

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 10/126 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDR 126
           S+LVDR
Sbjct: 111 SILVDR 116


>gi|206602154|gb|EDZ38636.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 416

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 176/417 (42%), Gaps = 86/417 (20%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M ++E++A +++ +KY +P  + V  +  +      I+  P    V+KS +  G RGK  
Sbjct: 1   MKLYEHEALESIYKKYKIPAPRFVFATEPNEKVREFIEKEPA--VVIKSMVLVGKRGKAG 58

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++ +D    + V   L S     RE+ G   I               VE+  DI +E 
Sbjct: 59  AVKVVSDKAQAIDVFKDLAS-----REVYGEKSI------------GALVEEKLDIKKEF 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE---------VAKD----YPQKIFKLLIDPLIGV 165
           YLS+         A I S  GGMD+EE         V KD    YP +I   L+   IG 
Sbjct: 102 YLSVTYSTKDRAPAIIFSEHGGMDVEEINPALIHTHVIKDVRSVYPYQIRNFLVG--IGF 159

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVL 222
           +  D+                  +L  N++ AF   +  LLEINPL++ + G   +L   
Sbjct: 160 SDPDLLRPLS-------------ELIVNVFHAFWLTEARLLEINPLVVAQVGDKKKLVAA 206

Query: 223 DSKISFDDNA-------------LYRHLDIQELRDVSEEDSREIEAKQHNL---SYIALD 266
           D+ +  DD+A             + R L  +E      +D+  I+   H     SY+ LD
Sbjct: 207 DAVVLLDDDASVSPAVRYGARGGMGRPLTQRE------QDAILIDQGDHRGKAGSYVELD 260

Query: 267 GNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G++  M  G G +  T +     G   AN  D+GG    +K+    +II S   +K +L 
Sbjct: 261 GDVALMTFGGGGSTVTAETAIEAGLRIANLTDIGGNPPAEKMYKIARIILSKPGLKAVL- 319

Query: 327 NIFGGI---MRCDV-LVKGILSAVKEVKI------NIPLVMRLEGANVDIGNRLIAE 373
            + GG     R DV L +G+  A+ ++K       N+  V+R  G     G +++ E
Sbjct: 320 -VCGGTASNTRIDVTLGEGLAKALDDMKAEGKLDPNLIWVVRRSGPEYVKGLKMLHE 375


>gi|124515910|gb|EAY57419.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum rubarum]
          Length = 416

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 176/417 (42%), Gaps = 86/417 (20%)

Query: 1   MNIHEYQA-KALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M ++E++A +++ +KY +P  + V  +  +      I+  P    V+KS +  G RGK  
Sbjct: 1   MKLYEHEALESIYKKYKIPAPRFVFATEPNEKVREFIEKEPA--VVIKSMVLVGKRGKAG 58

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++ +D    + V   L S     RE+ G   I               VE+  DI +E 
Sbjct: 59  AVKVVSDKAQAIDVFKDLAS-----REVYGEKSI------------GALVEEKLDIKKEF 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE---------VAKD----YPQKIFKLLIDPLIGV 165
           YLS+         A I S  GGMD+EE         V KD    YP +I   L+   IG 
Sbjct: 102 YLSVTYSTKDRAPAIIFSEHGGMDVEEINPALIHTHVIKDVRSVYPYQIRNFLVG--IGF 159

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVL 222
           +  D+                  +L  N++ AF   +  LLEINPL++ + G   +L   
Sbjct: 160 SDPDLLRPLS-------------ELIVNVFNAFWLTEARLLEINPLVVAQVGDKKKLVAA 206

Query: 223 DSKISFDDNA-------------LYRHLDIQELRDVSEEDSREIEAKQHNL---SYIALD 266
           D+ +  DD+A             + R L  +E      +D+  I+   H     SY+ LD
Sbjct: 207 DAVVLLDDDASVSPAVRYGARGGMGRPLTQRE------QDAILIDQGDHRGKAGSYVELD 260

Query: 267 GNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G++  M  G G +  T +     G   AN  D+GG    +K+    +II S   +K +L 
Sbjct: 261 GDVALMTFGGGGSTVTAETAIEAGLRIANLTDIGGNPPAEKMYKIARIILSKPGLKAVL- 319

Query: 327 NIFGGI---MRCDV-LVKGILSAVKEVKI------NIPLVMRLEGANVDIGNRLIAE 373
            + GG     R DV L +G+  A+ ++K       N+  V+R  G     G +++ E
Sbjct: 320 -VCGGTASNTRIDVTLGEGLAKALDDMKAEGKLDPNLIWVVRRSGPEYVKGLKMLHE 375


>gi|282895774|ref|ZP_06303861.1| succinyl-CoA synthetase beta chain [Raphidiopsis brookii D9]
 gi|281199274|gb|EFA74140.1| succinyl-CoA synthetase beta chain [Raphidiopsis brookii D9]
          Length = 404

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 179/431 (41%), Gaps = 66/431 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I   H  +     +P P+ V+KSQ++A  R +    
Sbjct: 1   MDLLEYQVKEWFNKIGIPVLPSQRID--HPTDLKRLKIPYPI-VLKSQVYANDRSQ---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  +    I+  + I         + P G  +  V + E   D   E Y
Sbjct: 54  ------VGGVKIVETTIDAIAAAQSIF--------SLPIGGELPKVLLAESKYDAQEEFY 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++++D        +      +D +   ++    + +    P           L   + L
Sbjct: 100 LAVVLDTVISRPVLLGCRY--IDWQSPGENMQYVVVEQEFSPFYA------RRLAYFMGL 151

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+      D+   +Y  F  KD+ L+EINPL I  + ++  L+ KI  ++ A+ RH DI
Sbjct: 152 RGELMQSVSDIVTKMYHLFLHKDLDLVEINPLGISSSCQVMTLNGKIRVNERAINRHPDI 211

Query: 240 QELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
               D++ + +R+  +K+ N   + +      G IG + NG G A+ T D +   GG PA
Sbjct: 212 A---DIATKIARDPGSKRINGMLVDMLGWNNQGEIGILANGNGSALTTWDAVVAAGGKPA 268

Query: 295 NFLDVGGGADQDKVAAAF--------KIITSDSSVKGILINIFGGIMRCD----VLVKGI 342
             L++            F        +++  D +V+ ILIN+ G I        V+   +
Sbjct: 269 VSLNLRHSWSNHTEPTKFSQRMETGLRVLAGDRNVQVILINLLGTIPELSEIPRVMTDFM 328

Query: 343 LSAVKEVK--INIP----------LVMRLEGANVDIGNR----LIAESGLNVITAIDLDD 386
              ++E++  +N P          +VMRL G +  +  +    ++     N I   +LD 
Sbjct: 329 ALQLEELRCFLNTPHKTLPQRLPKIVMRLAGNDFQVARKSLLSILQLQSENFILVENLDV 388

Query: 387 AAQKIVHAVKG 397
           A ++ +   K 
Sbjct: 389 AVKEALSLTKS 399


>gi|294953978|ref|XP_002787983.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239903108|gb|EER19779.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 194

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 4/173 (2%)

Query: 32  ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTL 91
           E   + L G   VVK+Q+  GGRG+G FKE     +GGV + SS         ++L  +L
Sbjct: 26  EDYARRLGGGDVVVKAQVLGGGRGRGHFKE--NGFQGGVHIASSPSEARIVAEQMLNKSL 83

Query: 92  ITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYP 151
           +T+QTG +G     V + +   I+ E Y ++++DR  G    + S  GGM IEEVA ++P
Sbjct: 84  VTRQTGLSGRMCKGVLLCEKLPIVAEKYFAIMLDRGLGGPVMVMSKHGGMSIEEVAIEHP 143

Query: 152 QKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
             + K+ ID   G+T+       + L   G            LY+ F   D +
Sbjct: 144 DAVTKIPIDVTTGLTTRQAEEAVEHLGFNGDPSAMA--TLKGLYRTFVGADCT 194


>gi|145615655|ref|XP_360366.2| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15]
 gi|145022445|gb|EDK06465.1| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15]
          Length = 1341

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 33/168 (19%)

Query: 249  DSREIEAKQHNLSYIALDGN------IGCMVNGAGLAMATMDIIKLYGG----------- 291
            D  E EA  H +++ +L         IG + NGAGLAM  +D +    G           
Sbjct: 934  DPVEAEAATHGITHFSLPTEPHQRRCIGVLSNGAGLAMNMIDALHAELGRRRVAAGGRGA 993

Query: 292  ----APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
                A ANFLD GG A  + ++     I  D  V+ + +NIFGGI+R DV+ +G++ A+K
Sbjct: 994  EEDVAVANFLDTGGKATSETISRCLGWILRDERVRVVFVNIFGGIIRGDVIAEGLIMALK 1053

Query: 348  EV------------KINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
            E+            +  +PLV+R+ G     G  L+AESGL+ +   D
Sbjct: 1054 EMRQGGAVCGQGTGRAAVPLVVRIRGTREKEGQALLAESGLDGVYVFD 1101


>gi|70938599|ref|XP_739953.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56517325|emb|CAH80172.1| hypothetical protein PC000760.03.0 [Plasmodium chabaudi chabaudi]
          Length = 192

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +   AE     L         V+K+QI +GGRG 
Sbjct: 46  LSIHEYLSIDLLRNNNIPCPQGYHAQTPEEAEEKALELQNACGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   +  GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKENKFE--GGVHICRNSMEIKDVASKMLNNTLVTKQTGPEGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           E Y++ L+DR S  +  + S+ GG  IE+
Sbjct: 164 ERYVAFLLDRNSDNICLLGSSVGGSSIED 192


>gi|282898786|ref|ZP_06306773.1| succinyl-CoA synthetase beta chain [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196313|gb|EFA71223.1| succinyl-CoA synthetase beta chain [Cylindrospermopsis raciborskii
           CS-505]
          Length = 404

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 181/431 (41%), Gaps = 66/431 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I   H  +     +P P+ V+KSQ++A  R +    
Sbjct: 1   MDLLEYQVKEWFNKIGIPVLPSQRID--HPTDLKRLKIPYPI-VLKSQVYANDRSQ---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  +    I+  + I         + P G  +  V + E   +   E Y
Sbjct: 54  ------VGGVKIVETTIDAIAAAQSIF--------SLPIGGELPKVLLAESKYNAQEEFY 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++++D        +      +D +   ++    + +    P           L  ++ L
Sbjct: 100 LAVVLDTVISRPVLLGCRY--IDWQSPGENMQYVVVEQEFSPFYA------RRLAYLMGL 151

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G       D+   +Y  F  KD+ L+EINPL +  + ++  L+ KI  ++ A+ RH DI
Sbjct: 152 RGGLMQSVSDIVTKMYHLFLHKDLDLVEINPLGVSSSCQVMTLNGKIRVNERAINRHPDI 211

Query: 240 QELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
               D++ + +R+  +K+ N   + +      G IG + NG G A+ T D +   GG PA
Sbjct: 212 A---DIASKIARDPGSKRINGMLVDMLGRNNQGEIGILANGTGSALTTWDAVVAAGGKPA 268

Query: 295 NFLDVGGGA--------DQDKVAAAFKIITSDSSVKGILINIFGGI-------------- 332
             L++               ++    +++ +D +++ ILIN+ G I              
Sbjct: 269 VSLNLRHSWLNHTEPTKFSQRMETGLRVLAADRNIQVILINLLGTIPELSEVPRVMTDFM 328

Query: 333 -MRCDVLVKGILSAVKEVKINIP-LVMRLEGANVDIGNR----LIAESGLNVITAIDLDD 386
            ++ + L   + ++ K +   +P +VMRL G +  +  +    ++     N I   +LD 
Sbjct: 329 ALQLEELKWFLNTSQKTLPQRLPKIVMRLAGNDFQVARKSLLSILQVQSENFILVENLDV 388

Query: 387 AAQKIVHAVKG 397
           A ++ V   K 
Sbjct: 389 AVKEAVSLTKS 399


>gi|70922358|ref|XP_734358.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56507024|emb|CAH83414.1| hypothetical protein PC300490.00.0 [Plasmodium chabaudi chabaudi]
          Length = 113

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 62/94 (65%)

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A ++++A A KII ++   K   INI GGIMRCD++ +GI++A K+++   PL++R
Sbjct: 1   VGGSATEEEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIQFKKPLIVR 60

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           LEG N     +++ ES +  I   D++ AA+K V
Sbjct: 61  LEGTNEKEAIKILEESNIKCIICQDMNLAAEKAV 94


>gi|157104411|ref|XP_001648397.1| hypothetical protein AaeL_AAEL004051 [Aedes aegypti]
 gi|108880381|gb|EAT44606.1| hypothetical protein AaeL_AAEL004051 [Aedes aegypti]
          Length = 253

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 37/178 (20%)

Query: 217 GRLRVLDSKISFDDNALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNG 275
           G++  +D+K++FDDNA +   DI  + DV E+ D +EIE   HN     L G        
Sbjct: 56  GQVISVDAKLNFDDNAQFGQKDIFAM-DVHEDTDPKEIEI--HN----QLPGR------- 101

Query: 276 AGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
                          G   N         + +V    +I+TSD +VK IL+NIFG I+  
Sbjct: 102 ---------------GRQCN-------VKEKQVLKTLQILTSDPNVKAILVNIFGEIVNF 139

Query: 336 DVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
             +  GI++A K + + +PLV+RL+G NVD   +++ ESGL + +  +L++AA+K ++
Sbjct: 140 TTIADGIVNATKTIGLKVPLVVRLKGTNVDAAKKILEESGLMIESVHELEEAAKKTIN 197


>gi|57525528|ref|NP_001006271.1| succinate-CoA ligase, ADP-forming, beta subunit [Gallus gallus]
 gi|53131646|emb|CAG31835.1| hypothetical protein RCJMB04_11p24 [Gallus gallus]
          Length = 200

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 3/149 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V  S   A    K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMGLLQEAGISVPHGLVAKSPEEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAKDISSKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKD 149
           ++ ++R+      I S+QGG++IE+VA +
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAE 198


>gi|255633624|gb|ACU17171.1| unknown [Glycine max]
          Length = 65

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 49/62 (79%)

Query: 333 MRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           M+CDV+  GI++A KEV + +P+V+RLEG NVD G R++ ESG+ +ITA DLDDAAQK V
Sbjct: 1   MKCDVIASGIVNAAKEVALKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAAQKAV 60

Query: 393 HA 394
            A
Sbjct: 61  KA 62


>gi|294948874|ref|XP_002785938.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900046|gb|EER17734.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 237

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 9/182 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+Q+  +  KY V V  G    +   AE   K L G   VVK+Q+ AGGRG+G FK
Sbjct: 48  LNLHEHQSLDVFEKYGVCVPHGYDAKTPEEAEQFAKALGGGDVVVKAQVLAGGRGRGYFK 107

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     +GGV +  +          ++G TL  K       R+     E    I  E Y 
Sbjct: 108 E--NGFQGGVHIVKNPIEAKDLASRMIGKTLSRK------GRLRLSKFER-FKIASEKYF 158

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L++R+ G    +    GGM IE+VA ++P  I K+ +D   G++  +   + + +  +
Sbjct: 159 AILMNRSFGGPVMVGCKYGGMSIEDVAAEHPDAIIKIPVDIDNGISDGEAREMAEKIGFE 218

Query: 181 GQ 182
           G+
Sbjct: 219 GE 220


>gi|215410541|ref|ZP_03419349.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
          Length = 106

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 3/99 (3%)

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N
Sbjct: 1   NFLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEAN 60

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQK 390
            PLV+RL+G NV+ G R++ E+   ++T +  +D+AA K
Sbjct: 61  KPLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADK 99


>gi|16329536|ref|NP_440264.1| succinate--CoA ligase [Synechocystis sp. PCC 6803]
 gi|1652018|dbj|BAA16944.1| succinate--CoA ligase [Synechocystis sp. PCC 6803]
          Length = 401

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 45/335 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKG- 57
           M++ EYQAK L ++  +P+     I +     +A+K L  P P+ V+KSQ+ AGGRGK  
Sbjct: 1   MDLLEYQAKELFQQVGIPILPSQTIQNT----TALKRLQIPYPM-VLKSQVRAGGRGKAG 55

Query: 58  --RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
             RF E   D+         L   I+D                       +  E   D  
Sbjct: 56  GVRFVENTIDAIAAASAIFHLP--IAD------------------EYPEVILAEARYDAQ 95

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            EL+L++++D        + S++GG+D+E + +       +    P +         L  
Sbjct: 96  SELFLAIVLDYQRQCPVLMGSSEGGIDVETLLEQMQSVSLRTNFSPYLA------RRLAV 149

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            + L G        +   +Y+ F   D+ ++EINPL I  +G +  LD KI+ +D A+ R
Sbjct: 150 KMGLTGPLVTAVSGIIGKMYELFVTYDLDVIEINPLGISADGEVMALDGKITVNDTAINR 209

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D+   R         +     NL+     G IG + N  GLA++T D++  +G   A 
Sbjct: 210 HPDLINWRSEQWTGHSWLPG---NLA----QGQIGLICNSEGLALSTWDLLNSFGITGAY 262

Query: 296 FLDVGGG--ADQDKVAAAFKIITSDSSVKGILINI 328
            LD G       +++  AF  ++   ++KGI +N+
Sbjct: 263 LLDEGRSDITLGEQLELAFNHLSQAPNLKGIFVNL 297


>gi|23491645|dbj|BAC16793.1| putative succinyl-CoA synthetase beta subunit N-terminal domain
          [Acidithiobacillus thiooxidans]
          Length = 86

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 10/96 (10%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          MN+HEYQAK LL +  +PV + +   SV  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1  MNLHEYQAKRLLAEEGIPVPRAIPAFSVREAVNQARELGGPAWVVKAQVHAGGRGKA--- 57

Query: 61 ELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
                 GGVRV  S+  V    +E+LG  L+T QT
Sbjct: 58 -------GGVRVVHSIAGVEKAAQELLGKPLVTAQT 86


>gi|170077513|ref|YP_001734151.1| succinate-CoA ligase beta chain [Synechococcus sp. PCC 7002]
 gi|169885182|gb|ACA98895.1| succinate-CoA ligase beta chain [Synechococcus sp. PCC 7002]
          Length = 388

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 34/352 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L  +  +P     +I+     E     +P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MELLEYQAKQLFEQVGIPTLPSQIIAD--PRELKQLQIPYPI-VLKSQVRAGGRGK---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                + G  RV++++ + I+  R I    +        G   + +  E   +  +E++L
Sbjct: 54  -----AGGIKRVQNTIDA-IAAARNIFNLAI-------AGQYPDVLLAEAHYERKQEIFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + S  GGM+I+++  +  Q + K    P           L + + ++
Sbjct: 101 AVVLDYELQRPVLLGSAHGGMEIDQLLANLHQVVIKDFFSPF------QARHLLNKMGIR 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y     KD+ L+EINPL I + G L  LD K++  D AL +H +I 
Sbjct: 155 GALVPALSDIIKKMYDLLLAKDLELVEINPLGINQAGELMALDGKVTVHDTALRKHPEIA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              +   + S   EA   +  +    G +G +  G G A    D++    G PA    +G
Sbjct: 215 LFYEHQNQLSFTPEAAPLSWQHDVQGGAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLG 274

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
             A Q +V + + +   D  ++ I++     + +  V+   +L+ V E +IN
Sbjct: 275 PRA-QGRVFSPYDL---DEQIE-IILEQLAALPQIKVV---LLNLVAEAEIN 318


>gi|126659214|ref|ZP_01730352.1| succinate--CoA ligase [Cyanothece sp. CCY0110]
 gi|126619519|gb|EAZ90250.1| succinate--CoA ligase [Cyanothece sp. CCY0110]
          Length = 412

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 26/239 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +PV     I+ +   +      P    V+KSQ+H+GGRG+    
Sbjct: 1   MDLLEYQAKELFHQVGIPVLPSQPIAQLSELKHLHIRYP---VVLKSQVHSGGRGRAGGI 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
               ++   V    ++ S+      ILG                 +  E   D   E +L
Sbjct: 58  RFVQNTIDAVAAAQAIFSL-----PILGE------------YPEVILAEARYDTQEEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+D        + S +GG+D+E + K + QK+   ++D   G +      L   + L+
Sbjct: 101 SILLDYQLQRPVLMGSAKGGIDVETLLK-HTQKV---VLDQ--GFSPFYARRLATKMGLK 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G+       +   +Y+ F +KD+ L+EINPL +  +G +  LD KI+ +D AL RHLD+
Sbjct: 155 GRLIHGVSTILEKMYQLFIEKDLDLIEINPLAVSASGEVMALDGKITVNDTALSRHLDL 213


>gi|52545516|emb|CAB43323.2| hypothetical protein [Homo sapiens]
          Length = 192

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 49/68 (72%)

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           S V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL +
Sbjct: 113 SQVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 172

Query: 379 ITAIDLDD 386
            +AIDL+D
Sbjct: 173 TSAIDLED 180



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%)

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DI
Sbjct: 12  KQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDI 71

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           EEVA   P+ IFK  ID   G+       + + L   G
Sbjct: 72  EEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVG 109


>gi|226490944|ref|NP_001141736.1| hypothetical protein LOC100273868 [Zea mays]
 gi|194705748|gb|ACF86958.1| unknown [Zea mays]
          Length = 423

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 160/378 (42%), Gaps = 53/378 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAE--SAIKTLPGPLYVVKSQIHAG 52
            I EY +K LLR++       ++ +    +  S   AE  S    L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAGIDLTILSAQITQSTDFAELVSQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +      V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGK----------SGLVALNLDFNQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE   D  + IF     P+   TS+  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLPTEKPM---TSDSCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ + +I  GD    ++  F D D S LE+NP   M NG    LD +   DD A
Sbjct: 166 LIATLPLEARGKI--GDFIKGVFAVFLDLDFSFLEMNPF-TMVNGEPYPLDMRGELDDTA 222

Query: 233 LYRH----------LDIQELRDVSEEDSREIEAKQH-NLSYIALD--GNIGCMVNGAGLA 279
            +++          L    +   +E    E++ K   +L +  L+  G I  MV G G +
Sbjct: 223 AFKNFKKWGGIEFPLPFGRVLSPTESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLNYSRVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 R-CDV--LVKGILSAVKE 348
              DV     GI+ A++E
Sbjct: 343 NFTDVATTFNGIIRALRE 360


>gi|55957257|emb|CAI15151.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
          Length = 154

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%)

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +           +   
Sbjct: 34  LIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMV 93

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSRE 252
            LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED R+
Sbjct: 94  KLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERD 153


>gi|213861747|ref|ZP_03386217.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 88

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/72 (50%), Positives = 49/72 (68%)

Query: 93  TKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ 152
           T QT   G  VN + VE   DI +ELYL  +VDR+S  V F+AST+GG++IE+VA++ P 
Sbjct: 1   TYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPH 60

Query: 153 KIFKLLIDPLIG 164
            I K+ +DPL G
Sbjct: 61  LIHKVALDPLTG 72


>gi|67925570|ref|ZP_00518900.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp
           [Crocosphaera watsonii WH 8501]
 gi|67852589|gb|EAM48018.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp
           [Crocosphaera watsonii WH 8501]
          Length = 418

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 30/241 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           M++ EYQAK L  +  +PV     I+ +    S +K L  P P+ V+KSQ+H+GGRG+  
Sbjct: 1   MDLLEYQAKELFHQVGIPVLPSQPIAKL----SELKHLHIPYPV-VLKSQVHSGGRGRAG 55

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                        V++++ +V +   + + S  I K+          +  E   D   E 
Sbjct: 56  GIRF---------VQNTIDAVAA--AQAIFSLPILKEYP------EVILAEARYDAQEEF 98

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           +LS+++D        + S +GG+D+E + K   + +      P           L   + 
Sbjct: 99  FLSIVLDYQLQRPVLMGSAKGGIDVETLLKHTQKVVLHQGFSPFYA------RRLATKMG 152

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           LQG+       +   +Y+ F +KD+ L+EINPL +  +G    LD KI+ +D AL RHLD
Sbjct: 153 LQGRLIHGVSIILEKMYQLFIEKDLDLVEINPLAVSSSGEFMALDGKITVNDMALSRHLD 212

Query: 239 I 239
           +
Sbjct: 213 L 213


>gi|229047522|ref|ZP_04193112.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
 gi|228723769|gb|EEL75124.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
          Length = 64

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 48/63 (76%)

Query: 333 MRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           M+CDV+ +G++ A K+V + +PLV+RLEG NV++G +++ ESGLN++ A  + D AQKIV
Sbjct: 1   MKCDVIAEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 60

Query: 393 HAV 395
             V
Sbjct: 61  SLV 63


>gi|325066866|ref|ZP_08125539.1| succinyl-CoA synthetase subunit beta [Actinomyces oris K20]
          Length = 123

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 20/129 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARNLFRQHGVPVLDGAVATTPEEARSAAQSLLDAGSELVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  + +   +  R+ILG  +        G  V  V + DG D+  E
Sbjct: 61  ----------GGVKLARTAEEAEARARDILGMDI-------KGHTVRAVLISDGVDLDAE 103

Query: 118 LYLSLLVDR 126
            Y S+L+DR
Sbjct: 104 YYFSILLDR 112


>gi|21673915|ref|NP_661980.1| citrate lyase, subunit 1 [Chlorobium tepidum TLS]
 gi|21647055|gb|AAM72322.1| citrate lyase, subunit1 [Chlorobium tepidum TLS]
          Length = 398

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 151/364 (41%), Gaps = 40/364 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPKRLAQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L   I   RE+LG+ + T +       V  V V +  D   E Y
Sbjct: 61  -------LGLVKIGLNLDEAIQASREMLGAKVGTAE-------VRQVIVAEMLDHDAEFY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S++ +R       + S  GG+DIE+      +    L   P I    E + +L      
Sbjct: 107 VSIIGNRDGA--ELLISKYGGVDIEDNWDSVRRIQIPLDEHPTI----EQLTALAKEAGF 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
           +G+     G +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH D
Sbjct: 161 EGEIAERVGKICSRLVLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHAD 220

Query: 239 IQELRDVSEEDSREIEAKQH----------NLSYIALD-GNIGCMVNGAGLAMATMDIIK 287
             + + VSE      EA+Q           ++ ++ +  G I  +  G G ++   D + 
Sbjct: 221 -WDFKPVSEIGRPFTEAEQQIMDIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYADAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAV 346
             GG  AN+ +  G      V A  + I    ++K I++               GI++ +
Sbjct: 280 ARGGTIANYAEYSGDPPDWAVEALTETICRLPNIKHIIVGGAIANFTDVKATFSGIINGL 339

Query: 347 KEVK 350
           +E K
Sbjct: 340 RESK 343


>gi|242069493|ref|XP_002450023.1| hypothetical protein SORBIDRAFT_05g027180 [Sorghum bicolor]
 gi|241935866|gb|EES09011.1| hypothetical protein SORBIDRAFT_05g027180 [Sorghum bicolor]
          Length = 423

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 161/378 (42%), Gaps = 53/378 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAE--SAIKTLPGPLYVVKSQIHAG 52
            I EY +K LLR++       ++ +    +  S   AE  S    L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAGIDLTILSAQITQSTDFAELVSQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +      V   ++E LG  +   + G   + +    VE   
Sbjct: 65  KRGK----------SGLVALNLDFDQVKEFVKERLGVEI---EMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE   D  + IF     P+   T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLPTEKPM---TPDSCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ + +I  GD    ++  F D D S LE+NP   M NG    LD +   DD A
Sbjct: 166 LIATLPLEARGKI--GDFIKGVFAVFQDLDFSFLEMNPF-TMVNGEPYPLDMRGELDDTA 222

Query: 233 LYRHL----DIQ------ELRDVSEEDSREIEAKQH-NLSYIALD--GNIGCMVNGAGLA 279
            +++     DI+       +   +E    E++ K   +L +  L+  G I  MV G G +
Sbjct: 223 AFKNFKKWGDIEFPLPFGRVLSSTESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLNYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 R-CDV--LVKGILSAVKE 348
              DV     GI+ A++E
Sbjct: 343 NFTDVAATFNGIIRALRE 360


>gi|261885863|ref|ZP_06009902.1| succinyl-CoA synthetase subunit beta [Campylobacter fetus subsp.
          venerealis str. Azul-94]
          Length = 87

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 10/97 (10%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          MNIHE+QAK LLR + + VA G+++ SV  A +A K L G ++ VK+QIHA         
Sbjct: 1  MNIHEFQAKELLRDFGINVADGIMVVSVDDALNAAKKLGGSVWAVKAQIHA--------- 51

Query: 61 ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTG 97
                 GGV++  SL  V     +ILG TL+TKQTG
Sbjct: 52 -GGRGLGGGVKIAKSLDEVKEYASKILGMTLVTKQTG 87


>gi|297670917|ref|XP_002813598.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like [Pongo abelii]
          Length = 79

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 48/66 (72%)

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +
Sbjct: 2   VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITS 61

Query: 381 AIDLDD 386
           AIDL+D
Sbjct: 62  AIDLED 67


>gi|115489130|ref|NP_001067052.1| Os12g0566300 [Oryza sativa Japonica Group]
 gi|77556190|gb|ABA98986.1| ATP-citrate synthase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649559|dbj|BAF30071.1| Os12g0566300 [Oryza sativa Japonica Group]
 gi|215678666|dbj|BAG92321.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215692808|dbj|BAG88252.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 423

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 170/404 (42%), Gaps = 62/404 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKT--------LPGPLYVVKSQIHAG 52
            I EY +K LLR++   +A   + I S    ES   T        L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELVNQEPWLSSMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +   L  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKS----------GLVALNLDLAQVRQFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTVFLPTEKAMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ + +I  GD    +Y  F D D S LE+NP   M NG    LD +   DD A
Sbjct: 166 LIATLPLEVRTKI--GDFIRGVYSVFQDLDFSFLEMNPF-TMVNGEPYPLDMRGELDDTA 222

Query: 233 LYRHL----DIQ------ELRDVSEEDSREIEAK-QHNLSYIALD--GNIGCMVNGAGLA 279
            +++     +IQ       +   SE    E++ K   +L +  L+  G I  MV G G +
Sbjct: 223 AFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 R-CDV--LVKGILSAVKE-------VKINIPLVMRLEGANVDIG 367
              DV     GI+ A++E        ++NI   +R  G N   G
Sbjct: 343 NFTDVAATFSGIIRALREKESKLKAARMNI--YVRRGGPNYQTG 384


>gi|189346749|ref|YP_001943278.1| ATP-grasp domain protein [Chlorobium limicola DSM 245]
 gi|189340896|gb|ACD90299.1| ATP-grasp domain protein [Chlorobium limicola DSM 245]
          Length = 398

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 176/394 (44%), Gaps = 61/394 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAES---AIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI   +  E    A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPNRLEQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+  ++  RE++G  + T       + +  V V +  D   E Y
Sbjct: 61  -------LGLVKLGLNLEEAVAASREMIGREIGT-------AVIRQVIVAEMLDHDEEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L +  +R    V  + S +GG+DIEE   D  +++F         +  ++  S+  + E 
Sbjct: 107 LCINGNRDGAEV--LLSNRGGVDIEE-NWDTVRRLF---------IPIDENPSVERLTEF 154

Query: 180 QGQARIDG------GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNA 232
             +A   G      G +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A
Sbjct: 155 AAEAGFTGEIAERVGKIVSRLVLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDA 214

Query: 233 LYRHLD-----IQEL-RDVSEEDSR--EIEAK-QHNLSYIALDG-NIGCMVNGAGLAMAT 282
            +RH D     + E+ R  +E + +  EI+A+ + ++ ++ + G  I  +  G G ++  
Sbjct: 215 RFRHADWDFKPVSEIGRPFTEAELQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVFY 274

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK-- 340
            D +   GG  AN+ +  G      V A  + + +  ++K I++   GG +     VK  
Sbjct: 275 SDAVVARGGTIANYAEYSGDPSDWAVEALTETVCALPNIKHIIV---GGAIANFTDVKAT 331

Query: 341 --GILSAVKEVKI-----NIPLVMRLEGANVDIG 367
             GI++  +E K      N+ + +R  G N + G
Sbjct: 332 FNGIINGFRESKSKGYLENVKIWVRRGGPNENQG 365


>gi|110597562|ref|ZP_01385848.1| citrate lyase, subunit 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340881|gb|EAT59355.1| citrate lyase, subunit 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 398

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 163/389 (41%), Gaps = 51/389 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI   + +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPNRLAQLGEANKWLRESKLVVKAHEAIGGRFKLGL 63

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +L      G+ +E +L++    I   +G+++I +           V V +  D   E Y
Sbjct: 64  VKL------GLNLEQALEAAQEMIGREIGTSVIRQ-----------VIVAEMLDHDEEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+  +R       + S +GG+DIE    D    + +L I      T E++  +      
Sbjct: 107 LSIAGNRDGA--ELLLSNKGGVDIE----DNWDTVKRLFIPLDENPTIEEITEVAHQAGF 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
            G+       +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH D
Sbjct: 161 TGEVAERVAKIASRLILCFDNEDSQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHAD 220

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDIIK 287
             + + VSE      EA+Q  +   A             G++  +  G G ++   D + 
Sbjct: 221 -WDFKPVSEIGRPFTEAEQQIMDIDARIKGSVKLVEVPGGDVALLTAGGGASVFYSDAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK----GIL 343
             GG  AN+ +  G      V A  + I    ++K I++   GG +     VK    GI+
Sbjct: 280 ARGGTIANYAEYSGDPPDWAVEALTETICRLPNIKHIIV---GGAIANFTDVKATFSGII 336

Query: 344 SAVKEVKI-----NIPLVMRLEGANVDIG 367
           +  +E K      N+ + +R  G N + G
Sbjct: 337 NGFRESKSKGYLENVKIWVRRGGPNENQG 365


>gi|78188767|ref|YP_379105.1| citrate lyase, subunit 1 [Chlorobium chlorochromatii CaD3]
 gi|78170966|gb|ABB28062.1| ATP citrate lyase subunit 1 [Chlorobium chlorochromatii CaD3]
          Length = 398

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 145/340 (42%), Gaps = 41/340 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           I E  A  L  K+ +PV   VV+       H  E A K L     VVK+    GGR K  
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVVMDPNRLAHLGE-ANKWLRESKLVVKAHEAIGGRFK-- 60

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V++  +L+  +   RE++G  + T       + ++ V V +  D   E 
Sbjct: 61  --------LGLVKLGLNLEQAVEASREMIGRKIGT-------AMISQVIVAEMLDHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+  +R       + S +GG+DIE    D    + +L I      T E +  +     
Sbjct: 106 YISIAGNRDGS--ELLVSNRGGVDIE----DNWDTVRRLAITIGETPTIERITEVATEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHL 237
            +G+       +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEIAERVAKIASRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNLDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G NI  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMEIDARIKGSVKFVEVPGGNIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
              GG  AN+ +  G      V A  + I    ++K I++
Sbjct: 279 VARGGTIANYAEYSGDPADWAVEALTETICRLPNIKHIIV 318


>gi|12407235|dbj|BAB21375.1| ATP-citrate lyase beta-subunit [Chlorobium limicola]
          Length = 398

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 152/359 (42%), Gaps = 42/359 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+  I   +E+LG+ + T + G        V + +  +   E Y
Sbjct: 61  -------LGLVKIGLNLEQAIEAAKEMLGAKVGTAEIGQ-------VIIAEMLEHDAEFY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S++ ++       + S  GG+DIE    D    + ++ I+     T E +  L      
Sbjct: 107 VSIIGNKDGA--ELLISKHGGVDIE----DNWDSVRRIQIELDENPTIEQLTELAKDAGF 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
           +G+     G +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH D
Sbjct: 161 EGEIAERVGKICSRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDARFRHAD 220

Query: 239 IQELRDVSEEDSREIEAKQH----------NLSYIALD-GNIGCMVNGAGLAMATMDIIK 287
             + + VSE      EA+Q           ++ ++ +  G I  +  G G ++   D + 
Sbjct: 221 -WDFKPVSEIGRPFTEAEQQIMEIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYADAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
             GG  AN+ +  G      V A  + I    ++K I++   GG +     VK   S +
Sbjct: 280 ARGGTIANYAEYSGDPADWAVEALTETICRLPNIKHIIV---GGAIANFTDVKATFSGI 335


>gi|62734470|gb|AAX96579.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 325

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 132/332 (39%), Gaps = 55/332 (16%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAE--SAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  S    E  +    L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +   +  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKS----------GLVALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE   D  + IF     P+   T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLSTEKPM---TPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ + +I  GD    ++  F D D S LE+NP  I+ NG    LD +   DD A
Sbjct: 166 LIATLPLEARGKI--GDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL------------DGNIGCMVNGAGLAM 280
            ++     E+ + S   S E    Q  LS   +             G I  MV G G ++
Sbjct: 223 AFKTSRSGEISN-SHYHSVEFSVLQKALSMTWMRSASLKFTVLNPKGRIWTMVAGGGASV 281

Query: 281 ATMDIIK-----------LYGGAPANFLDVGG 301
              D              L GG  ANF DVG 
Sbjct: 282 IYADTCATADPDGRKRALLIGGGIANFTDVGA 313


>gi|116488186|gb|ABJ98675.1| succinate-CoA ligase ADP-forming beta subunit [Scophthalmus
           maximus]
          Length = 188

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V SS   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 55  LSLHEYMSIGLLKEAGISVPVGLVASSSEEAYAVAKQIGSKDLVVKAQVLAGGRGKGTFE 114

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 115 ---GGLKGGVKIVYSPEEARDISSQMIGRKLYTKQTGEAGRICNQVFICERRYPRREYYF 171

Query: 121 SLLVDRT 127
           ++ ++R+
Sbjct: 172 AITMERS 178


>gi|62732887|gb|AAX95006.1| hypothetical protein LOC_Os11g47120 [Oryza sativa Japonica Group]
 gi|77552658|gb|ABA95455.1| ATP-citrate synthase, putative [Oryza sativa Japonica Group]
 gi|125578059|gb|EAZ19281.1| hypothetical protein OsJ_34825 [Oryza sativa Japonica Group]
          Length = 387

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 133/334 (39%), Gaps = 61/334 (18%)

Query: 2   NIHEYQAKALLRKY------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQI 49
            I EY +K LL+++            +  V +    + +   +  + T+     VVK  +
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMK---LVVKPDM 61

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RGK           G V +   +  V   ++E LG   +  + G   + +    VE
Sbjct: 62  LFGKRGKS----------GLVALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVE 108

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                 +E YLS++ +R    ++F  S  GG++IEE   D  + IF     P+   T + 
Sbjct: 109 PFVPHDQEYYLSIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLSTEKPM---TPDA 162

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            A L   L L+ + +I  GD    ++  F D D S LE+NP  I+ NG    LD +   D
Sbjct: 163 CAPLIATLPLEARGKI--GDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELD 219

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL------------DGNIGCMVNGAG 277
           D A ++     E+ + S   S E    Q  LS   +             G I  MV G G
Sbjct: 220 DTAAFKTSRSGEISN-SHYHSVEFSVLQKALSMTWMRSASLKFTVLNPKGRIWTMVAGGG 278

Query: 278 LAMATMDIIK-----------LYGGAPANFLDVG 300
            ++   D              L GG  ANF DVG
Sbjct: 279 ASVIYADTCATADPDGRKRALLIGGGIANFTDVG 312


>gi|194336478|ref|YP_002018272.1| ATP-grasp domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308955|gb|ACF43655.1| ATP-grasp domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 398

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 158/386 (40%), Gaps = 45/386 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L    +  +E++G  + T       S V  V V +  D   E Y
Sbjct: 61  -------LGLVKLGLNLDEAYAAAKEMIGRQIGT-------SVVRQVIVAEMLDHDEEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+  +R       + S +GG+DIE+      + +  L   P I   +E  A+L      
Sbjct: 107 LSIAGNRDGS--ELLLSNKGGVDIEDNWDTVKRLVISLDETPTIEHITE--AALEAGFTG 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
           +   R+    +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH D
Sbjct: 163 EVAERV--AKIASRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHAD 220

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDIIK 287
             + + VSE      EA+Q  +   A             GNI  +  G G ++   D + 
Sbjct: 221 -WDFKPVSEIGRSYTEAEQQIMDIDARIKGSVKLVEVPGGNIALLTAGGGASVFYSDAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAV 346
             GG+ AN+ +  G      V A  + I    ++K I++               GI++  
Sbjct: 280 ARGGSIANYAEYSGDPPDWAVEALTETICRLPNIKHIIVGGAIANFTDVKATFNGIINGF 339

Query: 347 KEVKI-----NIPLVMRLEGANVDIG 367
           +E K      N+ + +R  G N + G
Sbjct: 340 RESKSKGYLENVQIWVRRGGPNENQG 365


>gi|145219675|ref|YP_001130384.1| ATP citrate lyase subunit 1 [Prosthecochloris vibrioformis DSM 265]
 gi|145205839|gb|ABP36882.1| ATP citrate lyase subunit 1 [Chlorobium phaeovibrioides DSM 265]
          Length = 398

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 150/359 (41%), Gaps = 42/359 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPERLLQLGEANKWLRDSKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V+++ +L+      +E+LG  + T +       +  V V +  +   E Y
Sbjct: 61  -------LGLVKIDLNLEEAYEAAKEMLGRQIGTAE-------IRQVIVAEMLEHDAEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S+  +R       + S +GG+DIE    D    + +L I   +  T ED+  +      
Sbjct: 107 VSIAGNRDGA--ELLLSNKGGIDIE----DNWDTVKRLQIPLDVTPTIEDLTKIASSAGF 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
           +G+       +   L   F ++D   +EINPL+I  +  R   LD+ ++ D +A +RH D
Sbjct: 161 EGEVAERVAKIASRLILCFDNEDAQSIEINPLVIRNSDMRFAALDAVMNVDWDARFRHAD 220

Query: 239 IQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDIIK 287
             + + VSE      EA+Q           ++ ++ + G  I  +  G G ++   D + 
Sbjct: 221 -WDFKPVSEIGRPFTEAEQQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVFYSDAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
             GG  AN+ +  G      V A  + I    ++K I++   GG +     VK   S +
Sbjct: 280 ARGGTIANYAEYSGDPSDWAVEALTETICQLPNIKHIIV---GGAIANFTDVKATFSGI 335


>gi|193212663|ref|YP_001998616.1| ATP-grasp domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193086140|gb|ACF11416.1| ATP-grasp domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 398

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 152/359 (42%), Gaps = 42/359 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+  I   +E+LG+ + T + G        V + +  +   E Y
Sbjct: 61  -------LGLVKIGLNLEQAIEAAKEMLGAKVGTAEIGQ-------VIIAEMLEHDAEFY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S++ ++       + S  GG+DIE    D    + ++ I+     T E +  L      
Sbjct: 107 VSIIGNKDGA--ELLISKHGGVDIE----DNWDSVRRIQIELDENPTIERLTELAKDAGF 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
           +G+     G +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH D
Sbjct: 161 EGEIAERVGKICSRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDARFRHAD 220

Query: 239 IQELRDVSEEDSREIEAKQH----------NLSYIALD-GNIGCMVNGAGLAMATMDIIK 287
             + + VSE      EA+Q           ++ ++ +  G I  +  G G ++   D + 
Sbjct: 221 -WDFKPVSEIGRPFTEAEQQIMEIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYADAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
             GG  AN+ +  G      V A  + I    ++K I++   GG +     VK   S +
Sbjct: 280 ARGGTIANYAEYSGDPADWAVEALTETICRLPNIKHIIV---GGAIANFTDVKATFSGI 335


>gi|222617312|gb|EEE53444.1| hypothetical protein OsJ_36536 [Oryza sativa Japonica Group]
          Length = 457

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 151/353 (42%), Gaps = 53/353 (15%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           VVK  +  G RGK           G V +   L  V   ++E LG   +  + G   + +
Sbjct: 90  VVKPDMLFGKRGK----------SGLVALNLDLAQVRQFVKERLG---VEVEMGGCKAPI 136

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
               VE      +E YLS++ +R    ++F  S  GG++IEE       K+  + +    
Sbjct: 137 TTFIVEPFVPHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTVFLPTEK 190

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +T +  A L   L L+ + +I  GD    +Y  F D D S LE+NP   M NG    LD
Sbjct: 191 AMTPDACAPLIATLPLEVRTKI--GDFIRGVYSVFQDLDFSFLEMNPF-TMVNGEPYPLD 247

Query: 224 SKISFDDNALYRHL----DIQ------ELRDVSEEDSREIEAK-QHNLSYIALD--GNIG 270
            +   DD A +++     +IQ       +   SE    E++ K   +L +  L+  G I 
Sbjct: 248 MRGELDDTAAFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIW 307

Query: 271 CMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGI 324
            MV G G ++   D +   G A    N+ +  G  ++++V    +++    T+D   +  
Sbjct: 308 TMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKR 367

Query: 325 LINIFGGIMR-CDV--LVKGILSAVKE-------VKINIPLVMRLEGANVDIG 367
            + I GGI    DV     GI+ A++E        ++NI   +R  G N   G
Sbjct: 368 ALLIGGGIANFTDVAATFSGIIRALREKESKLKAARMNI--YVRRGGPNYQTG 418


>gi|224124562|ref|XP_002330054.1| predicted protein [Populus trichocarpa]
 gi|222871479|gb|EEF08610.1| predicted protein [Populus trichocarpa]
          Length = 423

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 161/381 (42%), Gaps = 59/381 (15%)

Query: 2   NIHEYQAKALLRKY------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQI 49
            I EY +K LL+++            +  V +G   + +   E  + +      VVK  +
Sbjct: 5   KIREYDSKRLLKEHLKRLSGIDLQICSAQVTEGTDFTELTNKEPWLSSTK---LVVKPDM 61

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RGK           G V +   L  V   ++  LG+ +   + G   + +    VE
Sbjct: 62  LFGKRGK----------SGLVALNLDLAQVAEFVKARLGAEV---EMGGCKAPITTFIVE 108

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                 +E Y+S++ +R    ++F  S  GG++IEE   D  + IF     P+   T E 
Sbjct: 109 PFVPHDQEFYISIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLPTEKPM---TLEA 162

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            A L   L L+ + +I  GD   +++  F D D S LE+NP  ++ NG    LD +   D
Sbjct: 163 CAPLIATLPLEIRGKI--GDFIISVFSVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELD 219

Query: 230 DNALYRH----------LDIQELRDVSEEDSREIEAK-QHNLSYIALD--GNIGCMVNGA 276
           D A +++          L    +   +E     ++ K   +L +  L+  G I  MV G 
Sbjct: 220 DTAAFKNFKKWGNVEFPLPFGRVLSSTESFIHSLDEKTSSSLKFTVLNPKGRIWTMVAGG 279

Query: 277 GLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFG 330
           G ++   D +   G A    N+ +  G  ++D+V    +++    TSD   +   + I G
Sbjct: 280 GASVIYADTVGDLGYASELGNYAEYSGAPNEDEVLQYARVVIDCATSDPDGRKRALLIGG 339

Query: 331 GIMR-CDV--LVKGILSAVKE 348
           GI    DV     GI+ A++E
Sbjct: 340 GIANFTDVAATFNGIIRALRE 360


>gi|166365727|ref|YP_001658000.1| succinyl-CoA synthetase beta chain [Microcystis aeruginosa
           NIES-843]
 gi|166088100|dbj|BAG02808.1| succinyl-CoA synthetase beta chain [Microcystis aeruginosa
           NIES-843]
          Length = 394

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 15/187 (8%)

Query: 100 GSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159
           G     +  E   +  +E++L++L+D        + ++QGGMD++ +     + + +   
Sbjct: 80  GEYPEVILAEARYNPQQEIFLAILLDYHLQRPVLLGASQGGMDVDSLLATMQKVVIEERF 139

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
            P +         L   + L+G        +   +Y  F  KD+ ++EINPL I + G +
Sbjct: 140 SPYL------CRQLAVSMGLRGSLIESISQILEKMYSLFVSKDLDIIEINPLGINEAGEV 193

Query: 220 RVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLA 279
             LD KIS +D AL RHLD+  L              Q   S I   G I  + NG GL 
Sbjct: 194 MALDGKISVNDAALARHLDLLALTP---------PQLQSPWSIIDQTGRIAMISNGQGLM 244

Query: 280 MATMDII 286
            +  D++
Sbjct: 245 SSIWDVL 251


>gi|218187089|gb|EEC69516.1| hypothetical protein OsI_38756 [Oryza sativa Indica Group]
          Length = 457

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 151/353 (42%), Gaps = 53/353 (15%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           VVK  +  G RGK           G V +   L  V   ++E LG   +  + G   + +
Sbjct: 90  VVKPDMLFGKRGK----------SGLVALNLDLAQVRQFVKERLG---VEVEMGGCKAPI 136

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
               VE      +E YLS++ +R    ++F  S  GG++IEE       K+  + +    
Sbjct: 137 TTFIVEPFVPHDQEYYLSIVSERLGFTISF--SECGGIEIEENW----DKVKTVFLPTEK 190

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +T +  A L   L L+ + +I  GD    +Y  F D D S LE+NP   M NG    LD
Sbjct: 191 AMTPDACAPLIATLPLEVRTKI--GDFIRGVYSVFQDLDFSFLEMNPF-TMVNGEPYPLD 247

Query: 224 SKISFDDNALYRHL----DIQ------ELRDVSEEDSREIEAK-QHNLSYIALD--GNIG 270
            +   DD A +++     +IQ       +   SE    E++ K   +L +  L+  G I 
Sbjct: 248 MRGELDDTAAFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIW 307

Query: 271 CMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGI 324
            MV G G ++   D +   G A    N+ +  G  ++++V    +++    T+D   +  
Sbjct: 308 TMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKR 367

Query: 325 LINIFGGIMR-CDV--LVKGILSAVKE-------VKINIPLVMRLEGANVDIG 367
            + I GGI    DV     GI+ A++E        ++NI   +R  G N   G
Sbjct: 368 ALLIGGGIANFTDVAATFSGIIRALREKESKLKAARMNI--YVRRGGPNYQTG 418


>gi|189500291|ref|YP_001959761.1| ATP-grasp domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495732|gb|ACE04280.1| ATP-grasp domain protein [Chlorobium phaeobacteroides BS1]
          Length = 398

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 154/367 (41%), Gaps = 42/367 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A     K+ +PV   VV+   + +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGSAMKFFDKWGIPVPNYVVVMDPNRLAQLGEANKWLRESKLVVKAHEAIGGRYK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+  +   RE+LG  + T +       +  V V +  D   E Y
Sbjct: 61  -------LGLVKLGLNLEEAVEASREMLGKKIGTAE-------IRQVIVAEMLDHDAEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLE 178
           LS+  ++       + S  GG+DIE+          K +  PL    S E++ +L +   
Sbjct: 107 LSMNGNKDGA--ELLVSKHGGVDIED-----NWDTVKRIQVPLDEAPSIEELTALAESAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHL 237
            + +     G +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A +RH 
Sbjct: 160 FEKEIAERVGKIASRLLLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHP 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G  +  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMELDARIKGSVKFVEVPGGEVALLTAGGGASVFYADAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSA 345
              GG+ AN+ +  G      V A  + +    ++K I++               GI++ 
Sbjct: 279 VARGGSIANYAEYSGAPPDWAVEALTETLCKLPNIKHIIVGGAIANFTDVRATFGGIING 338

Query: 346 VKEVKIN 352
           ++E K N
Sbjct: 339 LRESKTN 345


>gi|108864676|gb|ABA95549.2| ATP-citrate synthase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 368

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 53/354 (14%)

Query: 3   IHEYQAKALLRKY------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIH 50
           I EY +K LL+++            +  V +    + +   +  + T+     VVK  + 
Sbjct: 6   IREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMK---LVVKPDML 62

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK           G V +   +  V   ++E LG   +  + G   + +    VE 
Sbjct: 63  FGKRGKS----------GLVALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVEP 109

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                +E YLS++ +R    ++F  S  GG++IEE   D  + IF     P+   T +  
Sbjct: 110 FVPHDQEYYLSIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLPTEKPM---TPDAC 163

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           A L   L L+ + +I  GD    ++  F D D S LE+NP  I+ NG    LD +   DD
Sbjct: 164 APLIATLPLEARGKI--GDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELDD 220

Query: 231 NALYRH----------LDIQELRDVSEEDSREIEAKQH-NLSYIALD--GNIGCMVNGAG 277
            A +++          L    +   +E    +++ K   +L +  L+  G I  MV G G
Sbjct: 221 TAAFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGG 280

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
            ++   D +   G A    N+ +  G  ++++V    +++  D S + I I  F
Sbjct: 281 ASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVL-DVSTQDITITTF 333


>gi|326507652|dbj|BAK03219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 423

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 168/407 (41%), Gaps = 68/407 (16%)

Query: 2   NIHEYQAKALLRKY------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQI 49
            I EY +K LL+++            +  V +    + +   E  + ++     VVK  +
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELSNQEPWLSSMK---LVVKPDM 61

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RGK           G V +   L  V   ++E LG   +  + G   + +    VE
Sbjct: 62  LFGKRGKS----------GLVALNLDLAQVRQFVKERLG---VEVEMGGCKAPITTFIVE 108

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                 +E YLS++ DR    ++F  S  GG++IEE   D  + IF     P+   T + 
Sbjct: 109 PFVPHDQEYYLSIVSDRLGCTISF--SECGGIEIEE-NWDKVKTIFLPTEKPM---TLDA 162

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            A L   L L+ + +I  GD     +  F D D S +E+NP  ++ NG    LD +   D
Sbjct: 163 CAPLIATLPLEVRTKI--GDFIRGSFSVFQDLDFSFMEMNPFTLV-NGEPYPLDMRGELD 219

Query: 230 DNALYRH----------LDIQELRDVSEEDSREIEAKQH-NLSYIALD--GNIGCMVNGA 276
           D A +++          L    +   SE    E++ K   +L +  L+  G I  MV G 
Sbjct: 220 DTAAFKNFKKWGNIEFPLPFGRVLSPSESYIHELDEKTSASLKFTVLNPKGRIWTMVAGG 279

Query: 277 GLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFG 330
           G ++   D +   G A    N+ +  G   +++V    +++    T+D   +   + I G
Sbjct: 280 GASVIYADTVGDLGYASELGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGG 339

Query: 331 GIMR-CDV--LVKGILSAVKE-------VKINIPLVMRLEGANVDIG 367
           GI    DV     GI+ A++E        ++NI   +R  G N   G
Sbjct: 340 GIANFTDVAATFSGIIRALREKESKLKAARVNI--YVRRGGPNYQTG 384


>gi|67043836|gb|AAY64012.1| ATP synthetase [Pelodiscus sinensis]
          Length = 156

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 35  LSLLEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGSF- 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +  ++   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 94  --TSGLKGGVKIVFSPEEALAVSSQMIGQILITKQTGAKGRICNQVLVCERKFPRREYYF 151

Query: 121 SLLVD 125
           ++ ++
Sbjct: 152 AITME 156


>gi|159027650|emb|CAO89514.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 394

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 23/189 (12%)

Query: 100 GSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159
           G     +  E   +  +E++L++L+D        + ++QGGMD++ +     + + +   
Sbjct: 80  GEYPEVILAEARYNPQQEIFLAILLDYHLQRPVLLGASQGGMDVDSLLATMQKVVIEERF 139

Query: 160 DPLIGVTSEDVASLCDMLE----LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            P           LC  L     L+G        +   +Y  F  KD+ ++EINPL I +
Sbjct: 140 SPY----------LCRQLAVSMGLRGSLIESISQILEKMYSLFVSKDLDIIEINPLGINE 189

Query: 216 NGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNG 275
            G +  LD KIS +D AL RHLD+  L              Q   S I   G I  + NG
Sbjct: 190 AGEVMALDGKISVNDAALARHLDLLALTP---------PQLQSPWSIIDQTGQIAVISNG 240

Query: 276 AGLAMATMD 284
            GL     D
Sbjct: 241 QGLMSTVWD 249


>gi|147775765|emb|CAN64797.1| hypothetical protein VITISV_017316 [Vitis vinifera]
          Length = 423

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 155/378 (41%), Gaps = 53/378 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  +   AE   K   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLVGIDLQICSAQVTEATDFAELTNKEPWLSSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +   L  V   ++  LG   +  + G   + +    VE   
Sbjct: 65  KRGK----------SGLVALNLDLAQVAEFVKARLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTINLPTEKPMTPETCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ + +I  GD    ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLEVRGKI--GDFIKGVFAVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRDVSEEDSREI-----------EAKQHNLSYIALD--GNIGCMVNGAGLA 279
            +++       +      R +           E    +L +  L+  G I  MV G G +
Sbjct: 223 AFKNFKTWGNIEFPLPFGRVLSPTEGYIHLLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 R-CDV--LVKGILSAVKE 348
              DV     GI+ A+KE
Sbjct: 343 NFTDVAATFNGIIRALKE 360


>gi|119357118|ref|YP_911762.1| ATP citrate lyase subunit 1 [Chlorobium phaeobacteroides DSM 266]
 gi|119354467|gb|ABL65338.1| ATP citrate lyase subunit 1 [Chlorobium phaeobacteroides DSM 266]
          Length = 398

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 164/392 (41%), Gaps = 57/392 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPERLAQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+  +   RE++G  + T       + V  V V +  +   E Y
Sbjct: 61  -------LGLVKLGLNLEEALEASREMIGRKIGT-------AVVRQVIVAEMLEHDEEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S+  +R       + ST+GG+DIE+   D  +++F         +  ++  S+  + E+
Sbjct: 107 VSIAGNRDGA--ELLLSTKGGVDIED-NWDTVKRLF---------IPMDETPSVERLTEV 154

Query: 180 QGQARIDG------GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNA 232
             +A   G        +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A
Sbjct: 155 AAEAGFTGEVAERVAKIAARLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDA 214

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMA 281
            +RH D  + + VSE      EA+Q           ++ ++ + G  I  +  G G ++ 
Sbjct: 215 RFRHAD-WDFKPVSEIGRPYTEAEQQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVF 273

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVK 340
             D +   GG  AN+ +  G      V A  + I     ++ I++               
Sbjct: 274 YSDAVVARGGTIANYAEYSGDPPDWAVEALTETICRLPKIRHIIVGGAIANFTDVKATFS 333

Query: 341 GILSAVKEVKI-----NIPLVMRLEGANVDIG 367
           GI++ ++E +      N+ + +R  G N + G
Sbjct: 334 GIINGLRESRSKGYLQNVTIWVRRGGPNENQG 365


>gi|149928248|ref|ZP_01916492.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
 gi|149823054|gb|EDM82295.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
          Length = 59

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/57 (54%), Positives = 39/57 (68%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
          M IHEYQ K +L+KY V V  G    S+  A +A + L GP++VVK+QIHAGGRGK 
Sbjct: 1  MKIHEYQGKEILKKYGVAVPTGYPCFSIDEAIAAAEKLGGPVWVVKAQIHAGGRGKA 57


>gi|108864675|gb|ABA95548.2| ATP-citrate synthase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|218186206|gb|EEC68633.1| hypothetical protein OsI_37024 [Oryza sativa Indica Group]
          Length = 423

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 161/381 (42%), Gaps = 59/381 (15%)

Query: 2   NIHEYQAKALLRKY------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQI 49
            I EY +K LL+++            +  V +    + +   +  + T+     VVK  +
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMK---LVVKPDM 61

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RGK           G V +   +  V   ++E LG   +  + G   + +    VE
Sbjct: 62  LFGKRGK----------SGLVALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVE 108

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                 +E YLS++ +R    ++F  S  GG++IEE   D  + IF     P+   T + 
Sbjct: 109 PFVPHDQEYYLSIVSERLGSTISF--SECGGIEIEE-NWDKVKTIFLPTEKPM---TPDA 162

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            A L   L L+ + +I  GD    ++  F D D S LE+NP  I+ NG    LD +   D
Sbjct: 163 CAPLIATLPLEARGKI--GDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELD 219

Query: 230 DNALYRH----------LDIQELRDVSEEDSREIEAKQH-NLSYIALD--GNIGCMVNGA 276
           D A +++          L    +   +E    +++ K   +L +  L+  G I  MV G 
Sbjct: 220 DTAAFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGG 279

Query: 277 GLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFG 330
           G ++   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I G
Sbjct: 280 GASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGG 339

Query: 331 GIMR-CDV--LVKGILSAVKE 348
           GI    DV     GI+ A++E
Sbjct: 340 GIANFTDVGATFSGIIRALRE 360


>gi|295311890|gb|ADF97284.1| succinyl-CoA ligase [Litomosoides sigmodontis]
          Length = 41

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 36/41 (87%)

Query: 273 VNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           VNGAGLAMATMDIIKL+GG PANFLDVGG A  ++V+ +F+
Sbjct: 1   VNGAGLAMATMDIIKLHGGDPANFLDVGGSATAEQVSESFR 41


>gi|116787022|gb|ABK24345.1| unknown [Picea sitchensis]
 gi|224285160|gb|ACN40307.1| unknown [Picea sitchensis]
 gi|224285488|gb|ACN40465.1| unknown [Picea sitchensis]
          Length = 423

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 157/377 (41%), Gaps = 53/377 (14%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGG 53
           I EY +K LL+++        V +    V  S    E A +   +     VVK  +  G 
Sbjct: 6   IREYDSKRLLKEHLKRLTGLQVDIKSAQVTESTDFNELADREPWVSSSKLVVKPDMLFGK 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           G V +   L  VI+ ++E LG  +   + G   + +    VE    
Sbjct: 66  RGK----------SGLVALNLDLAQVIAFVKERLGKEV---EMGGAKAPITTFIVEPFVP 112

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E Y+S++ DR    ++F  S  GG++IEE       K+  + +     +T+E  A L
Sbjct: 113 HDDEFYMSIMSDRLGSTISF--SECGGIEIEENW----DKVKSVFVPTEKSLTAELCAPL 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L+ + +I+       ++  F D D + LE+NP  ++ NG    LD +   DD A 
Sbjct: 167 IATLPLEIRGKIE--TFIKGVFNLFLDLDFTFLEMNPFTLV-NGEPYPLDMRGELDDTAA 223

Query: 234 YRH----------LDIQELRDVSEEDSREIEAK-QHNLSYIALD--GNIGCMVNGAGLAM 280
           +++          L    +   SE     ++ K   +L +  L+  G I  MV G G ++
Sbjct: 224 FKNFKKWGNIEFPLPFGRVMSPSESAIHGMDEKTSSSLKFTILNPKGRIWTMVAGGGASV 283

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMR 334
              D +   G A    N+ +  G  ++D+V    +++    T++   +   + I GGI  
Sbjct: 284 IYADTVGDLGFANELGNYAEYSGAPNEDEVLQYARVLIDCATANPDGRKRALVIGGGIAN 343

Query: 335 ---CDVLVKGILSAVKE 348
                    GI+ A++E
Sbjct: 344 FTDVSATFSGIIRALRE 360


>gi|168000813|ref|XP_001753110.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695809|gb|EDQ82151.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 424

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 142/332 (42%), Gaps = 47/332 (14%)

Query: 2   NIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKT--------LPGPLYVVKSQIHAG 52
            I EY +K +L+++   +A   + I S    ES   T        L     VVK  +  G
Sbjct: 5   KIREYDSKRILKEHLKKLAGIDIAIKSAQVTESTDFTKLAEQEPWLNSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDG 111
            RGK           G V +   L  V++ ++E LG  + ++   GP    +    VE  
Sbjct: 65  KRGK----------SGLVALNLDLAGVVAFVKERLGKEVEMSGTKGP----ITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YLS++ DR    V+F  S  GG+DIEE   D  + IF  +      +TSE  A
Sbjct: 111 VPHKDEYYLSIVSDRLGVNVSF--SECGGIDIEE-NWDKVKAIF--VPTEQSTLTSEICA 165

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+ + +I+  +    ++  F + D +LLE+NP  I+ +G    LD +   DD 
Sbjct: 166 PLVATLPLEVRPKIE--EFLKGVFIVFSELDFTLLEMNPFTIV-DGTPYPLDMRGELDDT 222

Query: 232 ALYRH----------LDIQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           AL+++          L        +EE    ++ K      L+ +  +G I  MV G G 
Sbjct: 223 ALFKNTQKWGNVEFPLPFGRTMSPAEEKIHRMDEKTGASLKLTILNPEGRIWTMVAGGGA 282

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKV 308
           ++   D +   G A    N+ +  G  ++++ 
Sbjct: 283 SVIYSDTVGDLGFASELGNYAEYSGAPNEEET 314


>gi|225450474|ref|XP_002280514.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296089834|emb|CBI39653.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGG 53
           I EY +K LL+ +       ++ +    V  +   AE   K   L     VVK  +  G 
Sbjct: 6   IREYDSKRLLKDHLKRLAGIDLQICSAQVTEATDFAELTNKEPWLSSTRLVVKPDMLFGK 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           G V +   L  V   ++  LG   +  + G   + +    VE    
Sbjct: 66  RGK----------SGLVALNLDLAQVAEFVKARLG---VEVEMGGCKAPITTFIVEPFVP 112

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T E  A L
Sbjct: 113 HDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTINLPTEKPMTPETCAPL 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L+ + +I  GD     +  F D D S LE+NP  ++ NG    LD +   DD A 
Sbjct: 167 IATLPLEVRGKI--GDFIKGAFAVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTAA 223

Query: 234 YRHLDIQELRDVSEEDSREI-----------EAKQHNLSYIALD--GNIGCMVNGAGLAM 280
           +++       +      R +           E    +L +  L+  G I  MV G G ++
Sbjct: 224 FKNFKTWGNIEFPLPFGRVLSPTEGYIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 283

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMR 334
              D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI  
Sbjct: 284 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIAN 343

Query: 335 -CDV--LVKGILSAVKE 348
             DV     GI+ A+KE
Sbjct: 344 FTDVAATFNGIVRALKE 360


>gi|115941024|ref|XP_001185699.1| PREDICTED: similar to Succinate-CoA ligase, ADP-forming, beta
           subunit, partial [Strongylocentrotus purpuratus]
          Length = 38

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 32/37 (86%)

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDS 319
           MDIIKL+GG PANFLDVGGGA  D+V  AFK+ITSDS
Sbjct: 1   MDIIKLHGGTPANFLDVGGGATADQVKQAFKLITSDS 37


>gi|78186923|ref|YP_374966.1| citrate lyase, subunit 1 [Chlorobium luteolum DSM 273]
 gi|78166825|gb|ABB23923.1| ATP citrate lyase subunit 1 [Chlorobium luteolum DSM 273]
          Length = 398

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 151/365 (41%), Gaps = 54/365 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A  L  K+ +PV   VVI     +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGPAMKLFNKWGIPVPNYVVIMDPERLMQLGEANKWLRDSKLVVKAHEAIGGRYK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+      +E++G  + T       + V  V V +  +   E Y
Sbjct: 61  -------LGLVKIGLNLEEAYEAAKEMIGREIGT-------AVVRQVIVAEMLEHDAEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S+  +R       + S +GG+DIE    D    + +L I PL     ++  SL  + E 
Sbjct: 107 VSIAGNRDGA--ELLLSNKGGVDIE----DNWDTVKRLFI-PL-----DETPSLEKLTET 154

Query: 180 QGQARIDG------GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNA 232
              A   G        +   L   F ++D   +EINPL+I K+  R   LD+ ++ D +A
Sbjct: 155 AADAGFTGEVAERVAKIASRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDA 214

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMA 281
            +RH D  + + VSE      EA+Q           ++ ++ + G  I  +  G G ++ 
Sbjct: 215 RFRHAD-WDFKPVSEIGRPFTEAEQQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVF 273

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
             D +   GG  AN+ +  G      V A  + I    ++K I++   GG +     VK 
Sbjct: 274 YSDAVVARGGTIANYAEYSGDPADWAVEALTETICQLPNIKHIIV---GGAIANFTDVKA 330

Query: 342 ILSAV 346
             S +
Sbjct: 331 TFSGI 335


>gi|168022395|ref|XP_001763725.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684969|gb|EDQ71367.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 423

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 135/330 (40%), Gaps = 46/330 (13%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGG 53
           I EY +K + +++       +V +    V  S    E A K   L     VVK  +  G 
Sbjct: 6   IREYNSKRIFKEHLKRLAGIDVDIKAAQVTQSTDFNELANKEAWLNSTRLVVKPDMLFGK 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK     L  D  G   VES +K  +    E+ G+       GP    +    VE    
Sbjct: 66  RGKSGLVALNLDLAG---VESFVKDRLGKEVEMSGTK------GP----ITTFIVEPFVP 112

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E YLS++ DR    ++F  S  GG++IEE      +K+  + I     +TSE  A L
Sbjct: 113 HSDEFYLSIVSDRLGANISF--SECGGIEIEENW----EKVRSVFIPTEKTLTSELCAPL 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L+ +  I+        +  F D D +LLE+NP  ++ N  L  LD +   DD AL
Sbjct: 167 IATLPLEVRPIIEA--FLKGSFAVFEDLDFTLLEMNPFTLVNNVPL-PLDMRGELDDTAL 223

Query: 234 YRH----------LDIQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
           +++          L        +EE    ++ K      L+ +   G I  MV G G ++
Sbjct: 224 FKNFQKWGNVEFPLPFGRTMTPAEESIHRMDEKTGASLKLTILNPKGRIWTMVAGGGASV 283

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKV 308
              D +   G A    N+ +  G  ++++ 
Sbjct: 284 IYADTVGDLGYAHELGNYAEYSGAPNEEET 313


>gi|330796436|ref|XP_003286273.1| hypothetical protein DICPUDRAFT_54141 [Dictyostelium purpureum]
 gi|325083778|gb|EGC37222.1| hypothetical protein DICPUDRAFT_54141 [Dictyostelium purpureum]
          Length = 455

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 147/365 (40%), Gaps = 57/365 (15%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           VVK  +  G RGK           G V + ++L+   + I+E +   +   + G     V
Sbjct: 60  VVKPDMLFGKRGK----------NGLVLLNATLEEADNFIKEKINKPV---EIGGKSGLV 106

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
               VE       E YLS+   R S  ++F  S  GGM+IEE       K+  L I    
Sbjct: 107 THFIVEPFVPHTEEYYLSITAQRESNRISF--SNCGGMEIEENW----DKVSTLDIPYGE 160

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +   D+ +L D   L  +  I+      N+YK F D     +E+NP  +   G+   LD
Sbjct: 161 TIDKVDLHTLIDSSVLNREYVIE---FIRNIYKLFNDLSFHFIEMNPFTLDHEGKPYPLD 217

Query: 224 SKISFDDNALY----RHLDIQELRDVSEEDSREIEAKQH-------------NLSYIALD 266
           ++   D+ A +    R L   E     +   R +  ++               L+ +   
Sbjct: 218 ARGEVDECAAFKCGGRWLVDGEPVQFPQPFGRSLYPEETYVNELDEKTGASLKLTLLNPT 277

Query: 267 GNIGCMVNGAGLAMATMDIIK--LYGGAPANFLDVGGGA-DQDKVAAAFKIIT-----SD 318
           G I  MV G G ++   D +    YG    N+ +  G   ++D    A  II+      D
Sbjct: 278 GRIWAMVAGGGASVIYADTVADMGYGHELGNYGEYSGDPNEEDTHKYACTIISLATRNPD 337

Query: 319 SSVKGILINIFGGIMR-CDV--LVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRL 370
           S  + +LI   GGI    DV    KGI+ A+KE     +K N+ L +R  G N   G + 
Sbjct: 338 SKPRALLIG--GGIANFTDVAATFKGIIRAIKEYHQDIIKANLSLFVRRGGPNYQSGLQH 395

Query: 371 IAESG 375
           + E G
Sbjct: 396 MREIG 400


>gi|24658419|ref|NP_729076.1| sucb, isoform B [Drosophila melanogaster]
 gi|23094101|gb|AAN12099.1| sucb, isoform B [Drosophila melanogaster]
          Length = 112

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          +N+ E+Q+K LL+KY V + +  V+++  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23 LNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61 ELPADSKGGVRVES 74
                KGGV + +
Sbjct: 83 N---GFKGGVHITT 93


>gi|328870358|gb|EGG18733.1| putative ATP citrate synthase [Dictyostelium fasciculatum]
          Length = 464

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 177/419 (42%), Gaps = 71/419 (16%)

Query: 3   IHEYQAKALLRKYNVPVA------KGVVISSVHAAESAIKTLPGPLY------VVKSQIH 50
           I EY +K+LL+++   +       K V +     +   + TLP   +      VVK  + 
Sbjct: 6   IREYSSKSLLKQHLASLCNERLNLKMVQVQQGSLSLVELMTLPAHSWLQSTKLVVKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG-STLITKQTGPTGSRVNCVYVE 109
            G RGK             V + +++      I+E +G S  I+ +TGP    V    VE
Sbjct: 66  FGKRGKNNL----------VLLNATVVEADQFIKERMGKSVTISGKTGP----VTHFIVE 111

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                  E YLS++  R    ++F  S+ GGM+IEE+            +D   G  S D
Sbjct: 112 PFVPHAVEYYLSVVAKRDVNTISF--SSCGGMEIEELWDKVKS------VDIAYG-DSID 162

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
             +L ++++   Q R    D   N+YK F +     +E+NP  + ++G+   LD +   D
Sbjct: 163 TVNLHEIVDNTIQNREYIIDFIKNVYKIFEELSFHFIEMNPFTLDQDGKPFPLDMRGEID 222

Query: 230 DNALYR------------HLDIQELRDVSEEDS--REIEAKQH---NLSYIALDGNIGCM 272
           + A ++                   R++ +E++   +I+ K      L+ +   G I  M
Sbjct: 223 ECASFKCGNKWMVDGDPIQFPQPFGRELFQEETFINDIDEKTGASLKLTLLNPTGRIWAM 282

Query: 273 VNGAGLAMATMDIIKL--YGGAPANFLDVGGGA---DQDKVAAAFKIITS---DSSVKGI 324
           V G G ++   D +    YG    N+ +  G     D +K A+    + +   D   + +
Sbjct: 283 VAGGGASVIYADTVADLGYGHELGNYGEYSGDPNEEDTNKYASTMLSLATRNPDGRPRAL 342

Query: 325 LINIFGGIMR-CDVLV--KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           LI   GGI    DV V  KGI+ A+K+     V+ N+ + +R  G N   G + + E G
Sbjct: 343 LIG--GGIANFTDVAVTFKGIIHAIKQYSDEIVRSNLHIFVRRGGPNYQSGLQHMREIG 399


>gi|147832628|emb|CAN70448.1| hypothetical protein VITISV_017947 [Vitis vinifera]
          Length = 423

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 157/378 (41%), Gaps = 55/378 (14%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGG 53
           I EY +K LL+++       ++P+    +  S    E A K   L     VVK  +  G 
Sbjct: 6   IREYDSKRLLKEHFKRXSGTDLPIKSAQITESTDFNELAEKEPWLXSGKLVVKPDMLFGK 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           G V +   L  V + ++E LG  +   + G     +    VE    
Sbjct: 66  RGK----------SGLVALNLDLAQVXTFVKERLGKEV---EMGGCRGPITTFIVEPFIP 112

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E YL+++ +R    ++F  S  GG++IEE       K+  + I      TSE  A L
Sbjct: 113 HNEEFYLNMVSERLGXSISF--SECGGIEIEENW----DKVKTIFIPTGATFTSEICAPL 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L+ + +I+  +    ++  F D D + LE+NP  ++ +G+   LD +   DD A 
Sbjct: 167 VATLPLEIKGKIE--EFIKVVFALFVDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTAA 223

Query: 234 YRHLDIQELRDVSEEDSREI-----------EAKQHNLSYIALD--GNIGCMVNGAGLAM 280
           +++       +      R +           E    +L +  L+  G I  MV G G ++
Sbjct: 224 FKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 283

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGIM 333
              D +   G A    N+ +  G  ++++V    +++      +   +K  L+ I GGI 
Sbjct: 284 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALV-IGGGIA 342

Query: 334 R-CDV--LVKGILSAVKE 348
              DV     GI+ A+KE
Sbjct: 343 NFTDVAATFNGIIRALKE 360


>gi|194333911|ref|YP_002015771.1| ATP-grasp domain-containing protein [Prosthecochloris aestuarii DSM
           271]
 gi|194311729|gb|ACF46124.1| ATP-grasp domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 399

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 163/370 (44%), Gaps = 47/370 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A     K+ +PV   VV+   + +     A K L     VVK+    GGR K   
Sbjct: 4   ILEGSAMKFFNKWGIPVPNYVVVMDPNRLAQLGEANKWLRESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V++  +L+  +   RE++G  + T +       +  V V +  D   E Y
Sbjct: 61  -------LGLVKLGLNLEEAVEASREMIGRKIGTAE-------IRQVIVAEMLDHDEEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLE 178
           +S+  +        + S++GG+DIE+   D  Q+I  + ID    + +  D+A+     +
Sbjct: 107 VSIAGNPDGA--ELLLSSKGGVDIED-NWDTVQRI-HIPIDETPSLEALTDLATKAGFGD 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHL 237
            +   R+    +   L   + ++D   +EINPL+I K+  R   LD+ ++ D +A +RH 
Sbjct: 163 QEIAERV--AKIASRLILCYDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHP 220

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G  +  +  G G ++   D +
Sbjct: 221 D-WDFKPVSEIGRPFTEAEQQIMDIDSRIKGSVKFVEVPGGEVALLTAGGGASVFYADAV 279

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK----GI 342
              GG+ AN+ +  G      V A  + +    ++K I++   GG +     VK    GI
Sbjct: 280 VARGGSIANYAEYSGAPPDWAVEALTETLCQLPNIKHIIV---GGAIANFTDVKATFGGI 336

Query: 343 LSAVKEVKIN 352
           ++ ++E K N
Sbjct: 337 INGLRESKAN 346


>gi|225425595|ref|XP_002262914.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 423

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 159/379 (41%), Gaps = 57/379 (15%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIKT---LPGPLYVVKSQIHAG 52
           I EY +K LL+++       ++P+    +  S    E A K    L G L VVK  +  G
Sbjct: 6   IREYDSKRLLKEHFKRLSGTDLPIKSAQITESTDFNELAEKEPWLLSGKL-VVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +   L  V + ++E LG  +   + G     +    VE   
Sbjct: 65  KRGK----------SGLVALNLDLAQVGTFVKERLGKEV---EMGGCRGPITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IEE       K+  + I      TSE  + 
Sbjct: 112 PHNEEFYLNMVSERLGSSISF--SECGGIEIEENW----DKVKTIFIPTGATFTSEICSP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ + +I+  +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLEIKGKIE--EFIKVVFALFLDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRDVSEEDSREI-----------EAKQHNLSYIALD--GNIGCMVNGAGLA 279
            +++       +      R +           E    +L +  L+  G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI 332
           +   D +   G A    N+ +  G  ++++V    +++      +   +K  L+ I GGI
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALV-IGGGI 341

Query: 333 MR-CDV--LVKGILSAVKE 348
               DV     GI+ A+KE
Sbjct: 342 ANFTDVAATFNGIIRALKE 360


>gi|154315096|ref|XP_001556871.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10]
 gi|150847550|gb|EDN22743.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10]
          Length = 384

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 17/175 (9%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           +L++ +DR++     I   QG  +      + P K  KL         S  ++     L 
Sbjct: 205 HLTVGIDRSNRCPCLIIQEQGKEN------EPPTKSIKLPFSYDATRMSNVLSKCSSYLG 258

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEI-----NPLIIMKNGRLRVLDSKISFDDNAL 233
           L+ Q+R+    L  +LY+ F +K+  LLE          +  + R+ V++++  FDD A 
Sbjct: 259 LKPQSRLLK-SLVSDLYELFKEKEAFLLECVVKSQKATKLEAHQRMVVVNARFGFDDAAF 317

Query: 234 Y---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATM 283
               R  +I  L     +D  E +A++  + YI L  DGNIG +VNGAGLAM T+
Sbjct: 318 KSSNRQAEIHSLPRADIQDPAEKDAEKDGIVYIKLAGDGNIGTLVNGAGLAMNTV 372


>gi|302775344|ref|XP_002971089.1| hypothetical protein SELMODRAFT_147613 [Selaginella moellendorffii]
 gi|300161071|gb|EFJ27687.1| hypothetical protein SELMODRAFT_147613 [Selaginella moellendorffii]
          Length = 423

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 163/382 (42%), Gaps = 61/382 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT-----------LPGPLYVVKSQIH 50
            I EY +K LL+++   +A   +  ++H+A+   +T           L     VVK  + 
Sbjct: 5   KIREYDSKRLLKQHLKRLAS--IDLALHSAQVTQETDFDALADKEPWLNSTRLVVKPDML 62

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK           G V +   L  V + ++E LG  +   +   T + +    VE 
Sbjct: 63  FGKRGK----------SGLVALNLDLAGVEAFVKERLGREV---EMDGTKAPITTFIVEP 109

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E YLSL+  R    ++F  S  GG++IEE      +K+  + +     +T+E  
Sbjct: 110 FIPHDSEFYLSLVSHRLGVEISF--SECGGIEIEENW----EKVKTVFVPTEQPLTAETC 163

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           A L   L L+ + +I+       ++  F D D SL+E+NP  ++ NG    LD +   DD
Sbjct: 164 APLIATLPLEIRGKIE--TFIRGVFSVFEDLDFSLIEMNPFTLV-NGEPYPLDMRGELDD 220

Query: 231 NALYRHLDIQELRDV------------SEEDSREIEAKQH---NLSYIALDGNIGCMVNG 275
            AL++  + Q+  +V            +EE   +++ K      L+ +   G I  MV G
Sbjct: 221 TALFK--NFQKWGNVEFPVPFGRVMTPAEESIHKMDEKTGASLKLTILNPKGRIWTMVAG 278

Query: 276 AGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIF 329
            G ++   D +   G A    N+ +  G   +++      A    +T++   +   + I 
Sbjct: 279 GGASVIYADTVGDLGYAHELGNYAEYSGAPSEEETLHYARALIDCVTANPDGRRRALLIG 338

Query: 330 GGIMR-CDV--LVKGILSAVKE 348
           GGI    DV     GI+ A++E
Sbjct: 339 GGIANFTDVAATFNGIIRALRE 360


>gi|302757147|ref|XP_002961997.1| hypothetical protein SELMODRAFT_164817 [Selaginella moellendorffii]
 gi|300170656|gb|EFJ37257.1| hypothetical protein SELMODRAFT_164817 [Selaginella moellendorffii]
          Length = 423

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 162/381 (42%), Gaps = 61/381 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT-----------LPGPLYVVKSQIHA 51
           I EY +K LL+++   +A   +  ++H+A+    T           L     VVK  +  
Sbjct: 6   IREYDSKRLLKQHLKRLAS--IDLALHSAQVTQDTDFDALADKEPWLNSTRLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK           G V +   L  V + ++E LG  +   +   T + +    VE  
Sbjct: 64  GKRGK----------SGLVALNLDLAGVEAFVKERLGREV---EMDGTKAPITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YLSL+  R    ++F  S  GG++IEE      +K+  + +     +T+E  A
Sbjct: 111 IPHDSEFYLSLVSHRLGVEISF--SECGGIEIEENW----EKVKTVFVPTEQPLTAETCA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+ + +I+       ++  F D D SL+E+NP  ++ NG    LD +   DD 
Sbjct: 165 PLIATLPLEIRGKIE--TFIRGVFSVFQDLDFSLIEMNPFTLV-NGEPYPLDMRGELDDT 221

Query: 232 ALYRHLDIQELRDV------------SEEDSREIEAKQH---NLSYIALDGNIGCMVNGA 276
           AL++  + Q+  +V            +EE   +++ K      L+ +   G I  MV G 
Sbjct: 222 ALFK--NFQKWGNVEFPVPFGRVMTPAEESIHKMDEKTGASLKLTILNPKGRIWTMVAGG 279

Query: 277 GLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIFG 330
           G ++   D +   G A    N+ +  G   +++      A    +T++   +   + I G
Sbjct: 280 GASVIYADTVGDLGYAHELGNYAEYSGAPSEEETLHYARALIDCVTANPDGRRRALLIGG 339

Query: 331 GIMR-CDV--LVKGILSAVKE 348
           GI    DV     GI+ A++E
Sbjct: 340 GIANFTDVAATFNGIIRALRE 360


>gi|297739077|emb|CBI28566.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 159/380 (41%), Gaps = 57/380 (15%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIKT---LPGPLYVVKSQIHA 51
            I EY +K LL+++       ++P+    +  S    E A K    L G L VVK  +  
Sbjct: 47  KIREYDSKRLLKEHFKRLSGTDLPIKSAQITESTDFNELAEKEPWLLSGKL-VVKPDMLF 105

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK           G V +   L  V + ++E LG  +   + G     +    VE  
Sbjct: 106 GKRGK----------SGLVALNLDLAQVGTFVKERLGKEV---EMGGCRGPITTFIVEPF 152

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ +R    ++F  S  GG++IEE       K+  + I      TSE  +
Sbjct: 153 IPHNEEFYLNMVSERLGSSISF--SECGGIEIEENW----DKVKTIFIPTGATFTSEICS 206

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+ + +I+  +    ++  F D D + LE+NP  ++ +G+   LD +   DD 
Sbjct: 207 PLVATLPLEIKGKIE--EFIKVVFALFLDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDT 263

Query: 232 ALYRHLDIQELRDVSEEDSREI-----------EAKQHNLSYIALD--GNIGCMVNGAGL 278
           A +++       +      R +           E    +L +  L+  G I  MV G G 
Sbjct: 264 AAFKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 323

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGG 331
           ++   D +   G A    N+ +  G  ++++V    +++      +   +K  L+ I GG
Sbjct: 324 SVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALV-IGGG 382

Query: 332 IMR-CDV--LVKGILSAVKE 348
           I    DV     GI+ A+KE
Sbjct: 383 IANFTDVAATFNGIIRALKE 402


>gi|193216250|ref|YP_001997449.1| ATP-grasp domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089727|gb|ACF15002.1| ATP-grasp domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 398

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 142/339 (41%), Gaps = 39/339 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISS---VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           I E  A    +K+ +PV   VVI +   +     A K +     VVK+    GGR K   
Sbjct: 4   ILEGTAMKFFQKWGIPVPSYVVIMNPDRLKLLAEANKWMKESKLVVKAHEAIGGRFK--- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V+V  +L+   + +RE++G     K+ G T   +  V + +  +   E Y
Sbjct: 61  -------LGLVKVGLNLEEADAAVREMIG-----KKVGTT--VIKQVIIAEQLEHDEEYY 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+   R       + S  GG+D+EE      +  F +   P    T E +  L      
Sbjct: 107 LSINSHRQG--TDLLLSKYGGIDVEENWDKVQRITFDVDEQP----TKEQLIQLAHDAGF 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
           +G+       +   L     ++D   +EINPL+I K+  R   LD+ ++ D +A +RH D
Sbjct: 161 EGEIAERVAKIASRLVLCHENEDAQNIEINPLVIRKSDMRFAALDAVMNVDWDARFRHPD 220

Query: 239 IQELRDVSEEDSREIEAK----------QHNLSYIALDG-NIGCMVNGAGLAMATMDIIK 287
             + +  SE      +A+          + ++ ++ + G  I  +  G G ++   D + 
Sbjct: 221 -WDFKPTSEIGRPYTDAELQIMDIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYSDAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
             GG  AN+ +  G      V A  + I +  ++K I++
Sbjct: 280 ARGGTIANYAEYSGDPPDWAVEALTETICALPNIKHIIV 318


>gi|167518137|ref|XP_001743409.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778508|gb|EDQ92123.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1085

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 121/289 (41%), Gaps = 41/289 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCD 175
           E YL +   R    + F    +GG+D+ +V      K  KL++D     T E + S L  
Sbjct: 118 EHYLCIFAGREGNTIMF--CHEGGVDVGDV----DAKAAKLVLDIDEMPTEEKIKSTLFA 171

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            L     A I       NLYK F D   + LEINP++++ N  L VLD     D  A Y 
Sbjct: 172 QLPADRHALI--ATFIVNLYKTFLDLHFTYLEINPIVVVDN-ELYVLDLAAKLDQTAEYL 228

Query: 236 HLD---------------IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAM 280
             D               + E   ++E DS+        L+ +  +G I  MV G G ++
Sbjct: 229 CNDKWGNISFPPPFGRDALPEEAYIAELDSK--SGASLKLTILNAEGRIWTMVAGGGASV 286

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMR 334
              D I   GG+   AN+ +  G   + +     K I    T  +  +G ++ I GGI  
Sbjct: 287 VYSDTICDLGGSTELANYGEYSGAPSESQTFEYAKTILTLMTKQAHPEGKVLIIGGGIAN 346

Query: 335 CDVL---VKGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
              +    KGI+ A+++      + NI + +R  G N   G + + ++G
Sbjct: 347 FTNVASTFKGIIRALEDFAAIIKEHNIRIFVRRGGPNFQEGLKRMRDAG 395


>gi|23009910|ref|ZP_00050784.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 53

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 33/42 (78%)

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LV+RLEG NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 10  LVVRLEGTNVEEGKEIIRTSGLNVIPADDLDDAAQKIVAAVK 51


>gi|255640311|gb|ACU20444.1| unknown [Glycine max]
          Length = 266

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 31/246 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAK-GVVISSVHAAESAIKT--------LPGPLYVVKSQIHAG 52
            I EY +K LL+++   +A   + I S    ES   T        L     VVK  +  G
Sbjct: 5   KIREYHSKRLLKEHLKRLASIDLQILSAQVTESTDFTELTDQHPWLSSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK           G V +   +  V   ++  LG   +  + G   + +    VE   
Sbjct: 65  KRGKS----------GLVALNLDIAQVAEFVKARLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE   D  + IF     PL   T E  A 
Sbjct: 112 PHDQEFYLSIVSERHGSTISF--SECGGIEIEE-NWDKVKTIFLPTEKPL---TPEACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L  +L L+ +  I  GD    ++  F D D S LE+NP  ++ N +   LD +   DD A
Sbjct: 166 LIAILPLEIRGTI--GDFIMGVFAVFKDLDFSFLEMNPFTLV-NEKPYPLDMRGELDDTA 222

Query: 233 LYRHLD 238
            +++ +
Sbjct: 223 AFKNFN 228


>gi|332028433|gb|EGI68476.1| ATP-citrate synthase [Acromyrmex echinatior]
          Length = 1088

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 38/288 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R +  + F    QGG+DI +V      K  KL I   +G    D + L + 
Sbjct: 117 EAYVCIYSHRKADTILF--HHQGGIDIGDVDA----KALKLNIS--VGSEMPDRSILINR 168

Query: 177 L--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           L   +    ++   +   +LYK + +   + LEINPL+I  N  + VLD     D  A +
Sbjct: 169 LLTNVMDDKKVVIAEFIESLYKLYVNLHFTYLEINPLVITDNA-IHVLDLAAKLDTTADF 227

Query: 235 -RHLDIQEL-------RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
               D  E+       RD   E++   +++AK      L+ +  DG I  MV G G ++ 
Sbjct: 228 ICKPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNPDGRIWTMVAGGGASVI 287

Query: 282 TMDIIKLYGGAP--ANFLDVGGG-ADQDKVAAAFKIITSDSSVK---GILINIFGGI--- 332
             D I   G A   AN+ +  G  ++Q     A  I++  + VK   G ++ I GGI   
Sbjct: 288 YSDTICDLGAADELANYGEYSGAPSEQQTYEYAKTILSLMTKVKRSDGKVLIIGGGIANF 347

Query: 333 MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                  KGI+ A++E     V+ +I + +R  G N   G R+I E G
Sbjct: 348 TNVAATFKGIVKALQEYQSKLVEYDIKIFVRRAGPNYQEGLRIIREVG 395


>gi|159485736|ref|XP_001700900.1| ATP citrate lyase, subunit A [Chlamydomonas reinhardtii]
 gi|158281399|gb|EDP07154.1| ATP citrate lyase, subunit A [Chlamydomonas reinhardtii]
          Length = 435

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 140/342 (40%), Gaps = 46/342 (13%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAE--SAIKTLPGPLYVVKSQIHAGG 53
           I EY AK LL+ +       ++P+      ++ +A++  +A   L     VVK  +  G 
Sbjct: 6   IREYDAKRLLKAHMKRLAGIDLPIQVVQFTANTNASDLLNANPWLASTKLVVKPDMLFGQ 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK     L  D    +   ++          +  +  +   TGP    +    +E    
Sbjct: 66  RGKNDLVGLNMDFSQAIDFATA---------RLNRTVTVNGCTGP----ITTFVIEPFVP 112

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTSEDVAS 172
              E YLS+  +R    V+F  S  GG+ IEE        +   L  +P  G+    +A 
Sbjct: 113 HKDEYYLSITTNRNGWEVSF--SEAGGIHIEENWDKLRTVVLDTLDANPSGGLPEGALAP 170

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ +  ++      + +  F D D SL+E+NP  +   G+   LD ++  DD A
Sbjct: 171 LIAGLPLELRPTLE--RFIASAFAVFHDLDCSLMEMNPWTLDSAGQPFPLDMRVELDDTA 228

Query: 233 LYR-----HLDIQEL-------RDVSEED---SREIEAKQHNLSYIALD--GNIGCMVNG 275
            YR     +LD QEL       R ++  +   S   EA   +L +  L+  G++  MV G
Sbjct: 229 KYRSGGKWNLDGQELEFPLPFGRLLTPAEAAVSALDEATGASLKFTVLNPHGHVWLMVAG 288

Query: 276 AGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII 315
            G ++   D I   G A    N+ +  G  +  +  A  K +
Sbjct: 289 GGASVIYTDTIGDLGYAEELGNYGEYSGAPNTAETYAYAKTV 330


>gi|66816581|ref|XP_642300.1| hypothetical protein DDB_G0278341 [Dictyostelium discoideum AX4]
 gi|60470363|gb|EAL68343.1| hypothetical protein DDB_G0278341 [Dictyostelium discoideum AX4]
          Length = 450

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 149/372 (40%), Gaps = 71/372 (19%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           VVK  +  G RGK           G V + ++L+     I+E +   +   + G     V
Sbjct: 60  VVKPDMLFGKRGK----------NGLVLLNATLEEADKFIKEKINKPV---EIGGKSGLV 106

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE-------VAKDYPQKIFK 156
               VE       E YLS+  +R S  ++F  S  GGM+IEE       +   Y + I K
Sbjct: 107 THFIVEPFLPHTEEYYLSITAERESNRISF--SNCGGMEIEENWDKVSSIEIPYGESIDK 164

Query: 157 LLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
             +  +I  + ++   + D +               N+YK F D     +E+NP  +   
Sbjct: 165 FDLHTIIDSSVQNREYVIDFIR--------------NVYKLFNDLSFHFIEMNPFTLDAE 210

Query: 217 GRLRVLDSKISFDDNALYR------------HLDIQELRDVSEEDS--REIEAKQH---N 259
           G+   LD++   D+ A ++                   R +  E++   EI+ K      
Sbjct: 211 GKPYPLDARGEVDECASFKCGGRWLVDGEPVQFPQPFGRSLYPEETYVNEIDEKTGASLK 270

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIK--LYGGAPANFLDVGGGA-DQDKVAAAFKIIT 316
           L+ +   G I  MV G G ++   D +    +G    N+ +  G   ++D    A  +I+
Sbjct: 271 LTLLNPKGRIWAMVAGGGASVIYADTVADLGFGNELGNYGEYSGDPNEEDTHKYACTLIS 330

Query: 317 -----SDSSVKGILINIFGGIMR-CDV--LVKGILSAVKE-----VKINIPLVMRLEGAN 363
                 DS  + +LI   GGI    DV    KGI+ A+KE     +K N+ + +R  G N
Sbjct: 331 LATRNPDSRPRALLIG--GGIANFTDVAATFKGIIRAIKEYHDDIIKSNLSIFVRRGGPN 388

Query: 364 VDIGNRLIAESG 375
              G + + E G
Sbjct: 389 YQSGLQHMREIG 400


>gi|170029202|ref|XP_001842482.1| ATP-citrate synthase [Culex quinquefasciatus]
 gi|167881585|gb|EDS44968.1| ATP-citrate synthase [Culex quinquefasciatus]
          Length = 1096

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   RT+  + F    QGG+DI +V      K  KL +     VT+E +  +  +
Sbjct: 119 EAYVCIYSHRTADTILFY--HQGGVDIGDVD----AKALKLEVPVGTDVTAESIEKVL-L 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---- 232
            E+    +        NLYK + D   + LEINPL++  +  + +LD     D  A    
Sbjct: 172 TEVAAGKKKRIASFVYNLYKLYVDLYFTYLEINPLVVTDSA-IYILDLAAKVDATADFIC 230

Query: 233 --LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
              +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++   
Sbjct: 231 RPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 290

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS--DSSVK---GILINIFGGI---M 333
           D I   GGA   AN+ +  G   + +     K I S   SS K   G ++   GGI    
Sbjct: 291 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTSSPKHKDGKVLITGGGIANFT 350

Query: 334 RCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                  GI++A++E     ++ N+ + +R  G N   G R + E G
Sbjct: 351 NVAATFSGIITALREFQQRLIEHNVSIFVRRAGPNYQEGLRKMREIG 397


>gi|307197888|gb|EFN78987.1| ATP-citrate synthase [Harpegnathos saltator]
          Length = 1087

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 124/289 (42%), Gaps = 40/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEV-AKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           E Y+ +   R +  + F    QGG+DI +V AK        L +D  +G    D ++L D
Sbjct: 117 EAYVCIYSHRRADTILF--HHQGGIDIGDVDAK-------ALKLDVPVGSELPDRSTLID 167

Query: 176 ML--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
            L   +    ++   +   +LYK + +   + LEINPL++     + +LD     D  A 
Sbjct: 168 ELLTNVMDDKKMVIAEFIESLYKFYVNLYFTYLEINPLVVTDTA-IYILDLAAKLDTTAD 226

Query: 234 Y-RHLDIQEL-------RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
           +    D  E+       RD   E++   +++AK      L+ +   G I  MV G G ++
Sbjct: 227 FICRPDWGEIDYPPPFGRDAYSEEAYIADLDAKSGASLKLTILNPSGRIWTMVAGGGASV 286

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI-- 332
              D I   G A   AN+ +  G   + +     K I    T +    G ++ I GGI  
Sbjct: 287 IYSDTICDLGAADELANYGEYSGAPSEQQTYEYAKTILSLMTKEKRTDGKVLIIGGGIAN 346

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   KGI+ A++E     V+ NI + +R  G N   G R+I E G
Sbjct: 347 FTNVAATFKGIVKALQEYQPKLVEYNIKIFVRRAGPNYQEGLRIIREVG 395


>gi|290558794|gb|EFD92188.1| hypothetical protein BJBARM5_1988 [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 109

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 57/92 (61%), Gaps = 3/92 (3%)

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
           + +VA A +++  DS+ K + INIFGG+ + D + +GI+ A+ ++ I   +V+RL+G N 
Sbjct: 16  RQRVAEAIELV-KDSNPKVLFINIFGGVTKADTVAEGIVQAINKLNITFKIVVRLKGFNE 74

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             G  L+ ++ ++  T  D+ +A Q++V   K
Sbjct: 75  AKGKELLKKNEIDSFT--DMGEAIQEVVKLAK 104


>gi|23012766|ref|ZP_00052772.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 52

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 37/46 (80%)

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           +KI++PLV+RL G NV+ G +++AESGL++ITA  L DAA+K V A
Sbjct: 1   MKIDVPLVVRLAGTNVEAGQKILAESGLDLITAETLTDAARKAVEA 46


>gi|157105391|ref|XP_001648848.1| ATP-citrate synthase [Aedes aegypti]
 gi|108880117|gb|EAT44342.1| ATP-citrate synthase [Aedes aegypti]
          Length = 1127

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 36/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   RT+  + F    QGG+DI +V      K  KL +     VT E +  +  +
Sbjct: 117 EAYVCIYSHRTADTILFYH--QGGVDIGDVD----SKALKLDVPVGQDVTLESIEKVL-L 169

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---- 232
            E+    +        NLYK + D   + LEINPL++ ++  + +LD     D  A    
Sbjct: 170 TEVAAAKKKRVASFIYNLYKLYVDLYFTYLEINPLVVTESS-IYILDLAAKIDATADFVC 228

Query: 233 --LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
              +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++   
Sbjct: 229 RPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 288

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI---M 333
           D I   GGA   AN+ +  G   + +     K I     +S    +G ++   GGI    
Sbjct: 289 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTSSPKHPQGKVLITGGGIANFT 348

Query: 334 RCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                  GI++A++E     ++ N+ + +R  G N   G R + E G
Sbjct: 349 NVAATFSGIITALREFQQKLIEHNVSIFVRRAGPNYQEGLRKMREIG 395


>gi|324502258|gb|ADY40994.1| ATP-citrate synthase [Ascaris suum]
          Length = 1117

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 45/319 (14%)

Query: 95  QTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ 152
           Q G T  R++   VE   +     E+Y+++L  R   ++ F    +GG+D+     D   
Sbjct: 93  QVGKTTGRLHNFIVEPFVEHNETDEMYMAILSRRDHDIIMFYE--KGGIDV----GDIDI 146

Query: 153 KIFKLLIDPLIGVTSEDV--ASLCDMLE-LQGQARIDGGDLFPNLYKAFCDKDMSLLEIN 209
           K  KLL+   +G +S ++    L  ++E +  + R   G     LY  + D   + LEIN
Sbjct: 147 KARKLLVPVELGESSMELPETELQRLVEPVAEEKRSLVGTFIRELYNVYKDNFFTYLEIN 206

Query: 210 PLIIMKNGRLRVLDSKISFDDNALY--------RHLDIQEL-----RDVSEEDSR--EIE 254
           PL +M NG++ +LD     D+ AL+        R  +  E      RD++ E+    +++
Sbjct: 207 PL-VMNNGKVYILDLAAKLDETALFLCSEKWKTRTGEAVEFPAPFGRDLTAEEQYIADLD 265

Query: 255 AKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVA 309
           AK      L+ +   G I  MV G G ++   D +   GGA   AN+ +  G   + +  
Sbjct: 266 AKTGASLKLTILNRHGRIWTMVAGGGASVVFADTVCDLGGAAELANYGEYSGDPSETQTY 325

Query: 310 AAFK----IITSDSSVKGILINIFGG----IMRCDVLVKGILSAVKEVK-----INIPLV 356
              K    ++T         + I GG         +  KGI+ A +  +       + + 
Sbjct: 326 EYAKTILGVMTEGPPRPDGKVLIIGGSIANFTNVAMTFKGIVRAFETFQERLHEHRVTIY 385

Query: 357 MRLEGANVDIGNRLIAESG 375
           +R  G N   G R + ESG
Sbjct: 386 VRRGGPNYQEGLRKMKESG 404


>gi|152992137|ref|YP_001357858.1| ATP citrate synthase subunit 1 [Sulfurovum sp. NBC37-1]
 gi|151423998|dbj|BAF71501.1| ATP citrate synthase, subunit 1 [Sulfurovum sp. NBC37-1]
          Length = 436

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 169/417 (40%), Gaps = 58/417 (13%)

Query: 3   IHEYQAKALL-RKYNVPV------AKGVVISS-----VHAAESAIKTLPGPLYVVKSQIH 50
           I EY  KA+  R +N          K V++SS       A E   + L     V K  + 
Sbjct: 6   IREYDGKAIFARHWNEYFDGFHYGFKSVLVSSGDELREKAKEHGFEWLNQEPLVAKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +  D ++    TL++ + G     +   +   
Sbjct: 66  FGKRGKNDLVLFRVEKPGDVTLEDAAKWI--DEKQSHDVTLLSGEKGHLTHFIVEPFTPH 123

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
             D  +E Y+S        ++    S +GGM++EE    + +K+ ++ I   I +   D+
Sbjct: 124 TQD--QEYYISATTVGEDDVL--FMSAEGGMEVEE---GWDEKVNEVHIP--INMPDADM 174

Query: 171 ASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
             +       ++  + +          +K + D + + LEINP++++  G + +LD    
Sbjct: 175 EKMVKSHIPADIPDENKTAFASFAIQFFKFYRDMNFAYLEINPIVMLDGGEMAILDLVAR 234

Query: 228 FDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIALD-----GNIGCMV 273
            DD A +   D            + D+S+E+    EA   + + + L      G I  MV
Sbjct: 235 LDDTAGFMMKDAWGDIEFPTAFGMEDMSDEEKAIAEADSKSGASLKLTILNPMGRIWTMV 294

Query: 274 NGAGLAMATMDIIKLYGGAP--ANFLDVGGGAD--QDKVAAA--FKIITSDSSVKGILIN 327
            G G ++   D I  + G    AN+ +  GG    + K  A   F ++T     +G ++ 
Sbjct: 295 AGGGASVVYADTIADFAGVEDLANYGEYSGGPTTGETKFYAETIFDLMTRYDDPRGKVLI 354

Query: 328 IFGGIMRCDVLVK---GILSA-------VKEVKINIPLVMRLEGANVDIGNRLIAES 374
           I G I     + K   GI+ A       +KE K  I   +R  G N + G + I E+
Sbjct: 355 IGGAIANFTDVAKTFTGIIQAFEIYADKLKEHKTKI--YVRRGGPNYEKGLKDIKEA 409


>gi|302849248|ref|XP_002956154.1| hypothetical protein VOLCADRAFT_97107 [Volvox carteri f.
           nagariensis]
 gi|300258457|gb|EFJ42693.1| hypothetical protein VOLCADRAFT_97107 [Volvox carteri f.
           nagariensis]
          Length = 448

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 153/388 (39%), Gaps = 54/388 (13%)

Query: 3   IHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIKTLPGPLY-----VVKSQIH 50
           I EY AK LL+ +       ++P+    V+    A+  +      P       VVK  + 
Sbjct: 6   IREYDAKRLLKAHIKRLAGLDLPIQ---VVQFTAASNPSDLLNENPWLGNTRLVVKPDML 62

Query: 51  AGGRGKGRFKELPAD-SKGGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYV 108
            G RGK     L  D S+       S    I    + L  T+ +   TGP    +    +
Sbjct: 63  FGQRGKNDLVGLNLDFSQASTMCFPSAIWAIDFATQRLNRTVTVNGCTGP----ITTFLI 118

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E       E YLS+   R    V+F  S  GG+ IEE        +      PL    S 
Sbjct: 119 EPFVAHEEEFYLSITSTRNGWEVSF--SEAGGIHIEENWDKLRTVVLDTTDCPL---DSA 173

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            VA L   L L+ +  ++   L    +  F D D +LLE+NP  +  +G+   LD ++  
Sbjct: 174 RVAPLIAGLPLELKPALERFIL--AAFAVFNDLDCTLLEMNPWTLDASGQPFPLDMRVEL 231

Query: 229 DDNALYRH--------------LDIQELRDVSEEDSREI-EAKQHNLSYIALD--GNIGC 271
           DD + YR+              L    L   +EE    + EA   +L +  L+  G +  
Sbjct: 232 DDTSKYRNGPKWNVGDVELEFPLPFGRLLTPAEEAVSALDEATGASLKFTVLNPAGRVWL 291

Query: 272 MVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGIL 325
           MV G G ++   D I   G A    N+ +  G  +  +     + +    T+ +  +G +
Sbjct: 292 MVAGGGASVIYTDTIADLGFAQELGNYGEYSGAPNTSETYQYARTVLDCATAHADGRGRV 351

Query: 326 INIFGGIMR-CDV--LVKGILSAVKEVK 350
           + I GGI    DV     GI+ A+KE K
Sbjct: 352 LLIGGGIANFTDVAATFTGIIQALKEKK 379


>gi|260814543|ref|XP_002601974.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae]
 gi|229287278|gb|EEN57986.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae]
          Length = 1097

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 142/340 (41%), Gaps = 40/340 (11%)

Query: 68  GGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           G ++V ++L  V   ++E +   + I K TG   + V   +V    +   E Y+ +   R
Sbjct: 68  GLIKVNATLDEVKQWVKERMNKEMKIGKSTGLLKNFVVEPFVPHKQE--EEFYVCIYAHR 125

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               + F    +GG+DI +V      K  KL +  LIG  S  +  L   L  +  A   
Sbjct: 126 DGETILF--HHEGGVDIGDVD----AKAVKLEV--LIG-ESPSLEDLQKKLVHKAPAPKQ 176

Query: 187 G--GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-----LDSKISFDDNALYRHLDI 239
                   NLY  + D   + LEINPL++   G   +     +D    F   A +  LD 
Sbjct: 177 PVLAQFISNLYTVYTDLYFTYLEINPLVVTDEGVYILDLAAKIDQTAEFICKAKWGELDF 236

Query: 240 QEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
                R+   E++   +++AK      L+ +   G I  MV G G ++   D I   GGA
Sbjct: 237 PPPFGREAYPEEAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGASVIYSDTICDLGGA 296

Query: 293 P--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI---MRCDVLVKGIL 343
              AN+ +  G   + +     K I    T +   +G ++ I GGI          KGI+
Sbjct: 297 SELANYGEYSGAPSEGQTYEYAKTILSLMTREKHAEGKVLIIGGGIANFTNVAATFKGIV 356

Query: 344 SAVKEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
            A+K+ +      N+ + +R  G N   G R++ E G ++
Sbjct: 357 RALKDYQAKLKEYNVTVFVRRGGPNYQEGLRIMRELGQHI 396


>gi|321461384|gb|EFX72417.1| hypothetical protein DAPPUDRAFT_308310 [Daphnia pulex]
          Length = 1074

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 37/291 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E Y+ +  +R   ++ F    QGG+DI +V     +K  +L ++     + ED+ S  L 
Sbjct: 117 EAYVCVYSERNGDVILF--HHQGGVDIGDVD----EKALRLSVEIDNKPSREDILSGLLV 170

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           ++ +   + R+   D    LY  + D   + +EINPL++   G + +LD     D  A +
Sbjct: 171 NVTDNAKKERV--ADYIVALYDVYVDLHFTYMEINPLVVTAEGGVFMLDLAAKIDATADF 228

Query: 235 ----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
               +   I+      RD   E++   ++++K      L+ +   G I  MV G G ++ 
Sbjct: 229 LCRTKWGSIEYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNRAGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI--- 332
             D I   GGA   AN+ +  G   + +     K I    T D    G ++ I GGI   
Sbjct: 289 YSDTICDLGGAAELANYGEYSGAPSEQQTYEYAKTILSLMTQDKHPDGKVLIIGGGIANF 348

Query: 333 MRCDVLVKGILSAV-----KEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
                  KGI+ A+     K V   + + +R  G N   G R++ E G N+
Sbjct: 349 TNVAATFKGIVKALLQYQTKLVDHKVSIFVRRAGPNYQEGLRVMREVGANL 399


>gi|308500690|ref|XP_003112530.1| hypothetical protein CRE_30753 [Caenorhabditis remanei]
 gi|308267098|gb|EFP11051.1| hypothetical protein CRE_30753 [Caenorhabditis remanei]
          Length = 1099

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 61/314 (19%)

Query: 105 CVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA-KDYPQKIFKLLIDPLI 163
           C + +D      E+Y+++  +R   ++ F    QGG+DI +V  K     I   L D  +
Sbjct: 110 CAHTDD-----EEMYIAIYSERCRDVIMFYE--QGGVDIGDVEEKARAVHIPVKLDDSEM 162

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +T  ++  L    + +   R        NLY+A+     + LEINP + + NG++ +LD
Sbjct: 163 SITERELDVLLGPCKEKDVIR----KFVKNLYEAYKTLHFTYLEINPFV-LTNGKIHILD 217

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIE-----------AKQH------------NL 260
                D+ A +   D    R  S   +R IE            +Q+             L
Sbjct: 218 LAAKLDETANFLCSDKWSSRTASARIARSIEFPAPFGRDLTTEEQYISDMDAKTGASLKL 277

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSD 318
           + +   G +  MV G G ++   D +   GGA   AN+ +  G   + +     K I S 
Sbjct: 278 TILNRQGRVWTMVAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTILSV 337

Query: 319 SS------------VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
            +            + G + N       FGGI+R     +  +  +KE K++I   +R  
Sbjct: 338 MTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRA---FETFIDKLKEHKVSI--YVRRG 392

Query: 361 GANVDIGNRLIAES 374
           G N   G R + ++
Sbjct: 393 GPNYQEGLRRVKDA 406


>gi|269148458|gb|ACZ28601.1| ATP-grasp domain-containing protein [uncultured organism]
          Length = 432

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 106 VYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           V  E G     E+Y+S+             +  GG+DIEE+ +D   KI  +  DPL G+
Sbjct: 95  VTFESGIPAEYEIYVSITDSTIYRAPTLTITHHGGVDIEELPED---KIATVPFDPLTGL 151

Query: 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL--- 222
               +++    L    +         P L+  + +  M++LE+NP+ +M N + R++   
Sbjct: 152 KGFVISNTLRQLGAPNEIISPLVQNLPKLWDLYHNYGMNMLELNPIRMMPNAKGRLVPVA 211

Query: 223 -DSKISFD-DNALYRHLDIQELRDVSEEDSREIEAKQ 257
            D K SFD D+  ++ L +    D  E  + E+E  Q
Sbjct: 212 CDFKCSFDTDDPNWKRLKLPASLDSGELCAYELEVNQ 248


>gi|312066071|ref|XP_003136095.1| ATP-citrate synthase [Loa loa]
 gi|307768733|gb|EFO27967.1| ATP-citrate synthase [Loa loa]
          Length = 1113

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 122/295 (41%), Gaps = 43/295 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCD 175
           E+Y++++  R   ++ F     GG+DI ++     +  F + ID   + +   DV SL  
Sbjct: 117 EMYIAIISRREDDVILFYE--HGGVDIGDIDAKARKLYFPVDIDRKSVSIADHDVESLIG 174

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            +E Q  + +        LY  + +   + LEINP +++ N ++ +LD     D+ AL+ 
Sbjct: 175 PMESQKLSLLK--TFVKALYYVYKENCFTYLEINPFVLVNN-KIYILDLAAKLDETALFL 231

Query: 236 HLDIQELRD--------------------VSEEDSREIEAKQHNLSYIALDGNIGCMVNG 275
             +I + RD                    V++ DSR        L+ +   G I  MV G
Sbjct: 232 CSEIWKTRDGEPVDFPAPFGRDKMAEEKYVADLDSR--TGASLKLTILNRRGRIWTMVAG 289

Query: 276 AGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS-----DSSVKGILINI 328
            G ++   D I   GG    AN+ +  G   +       K I S         KG ++ I
Sbjct: 290 GGASVVYTDTICDLGGMSELANYGEYSGDPSEIMTYEYAKTILSVLTEGSPHPKGKILII 349

Query: 329 FGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
            G I     + K   GI+ A++E      +  + + +R  G N   G R + E+G
Sbjct: 350 GGSIANFTNVAKTFRGIIKAIEEYGELLHEHKVTIHVRRGGPNYQEGLRKMKETG 404


>gi|66530142|ref|XP_623083.1| PREDICTED: ATP-citrate synthase isoform 1 [Apis mellifera]
          Length = 1086

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 43/339 (12%)

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED--GADILRELYLSLLVD 125
           G ++V + L +V   I E +      +Q G T  ++    +E         E Y+ +   
Sbjct: 69  GLIKVNADLATVKQWIAERMNKD---QQVGKTTGKLRTFIIEPFIPHKQEEEAYVCIFSH 125

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD--MLELQGQA 183
           R +  + F    +GG+DI +V          L +D  +G  + + +++ +  ++ +    
Sbjct: 126 RKADTILF--HHEGGVDIGDVDAK------ALKLDIAVGEEAPNRSTIIEKLLINVTDDK 177

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-RHLDIQEL 242
           +   G+   +LYK +     + LEINPL+I +N ++ +LD     D  A +    D  E+
Sbjct: 178 KEIIGNFIESLYKLYVTLYFTYLEINPLVITEN-KIYILDLAAKLDTTADFICRPDWGEI 236

Query: 243 -------RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
                  RD   E++   +++AK      L+ +   G I  MV G G ++   D I   G
Sbjct: 237 DYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNPAGRIWTMVAGGGASVIYSDTICDLG 296

Query: 291 GAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI---MRCDVLVKG 341
            A   AN+ +  G   + +     K I    T +   +G ++ I GGI          KG
Sbjct: 297 VANELANYGEYSGAPSEQQTYEYAKTILSLMTKEKRKEGKVLIIGGGIANFTNVAATFKG 356

Query: 342 ILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           I+ A++E     V  NI + +R  G N   G R+I E G
Sbjct: 357 IVKALQEYQPKLVDHNIQIFVRRAGPNYQEGLRIIREVG 395


>gi|119114534|ref|XP_319323.3| AGAP010156-PA [Anopheles gambiae str. PEST]
 gi|116118462|gb|EAA13829.3| AGAP010156-PA [Anopheles gambiae str. PEST]
          Length = 1082

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   RT+  + F    QGG+DI +V      K  KL +     VT  ++  +  +
Sbjct: 117 EAYVCIYSHRTADTILFYH--QGGVDIGDVDA----KALKLEVPVGTDVTMAEIEKVL-L 169

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---- 232
            E+    +    +   NLYK + D   + LEINPL++  +  + +LD     D  A    
Sbjct: 170 TEISSAKKKRVANFVYNLYKMYVDLYFTYLEINPLVVTDDS-IYILDLAAKVDATADFIC 228

Query: 233 --LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
              +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++   
Sbjct: 229 RPKWGEIDYPPPFGRDAFPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 288

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS--DSSVK---GILINIFGGI---M 333
           D I   GGA   AN+ +  G   + +     K I S   SS K   G ++   GGI    
Sbjct: 289 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLMTSSPKHPDGKVLITGGGIANFT 348

Query: 334 RCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                  GI++A+++     ++ N+ + +R  G N   G R + E G
Sbjct: 349 NVAATFSGIITALRDYQQKLIEHNVSIFVRRAGPNYQEGLRKMREIG 395


>gi|17551266|ref|NP_508280.1| hypothetical protein D1005.1 [Caenorhabditis elegans]
 gi|1703082|sp|P53585|ACLY_CAEEL RecName: Full=Probable ATP-citrate synthase; AltName:
           Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate
           cleavage enzyme
 gi|1326262|gb|AAB00585.1| Hypothetical protein D1005.1 [Caenorhabditis elegans]
          Length = 1106

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 130/306 (42%), Gaps = 64/306 (20%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDI---EEVAK--DYPQKIFKLLIDPLIGVTSEDVA 171
           E+Y+++  +R   ++ F    QGG+DI   EE A+    P ++ +  + P    + E++ 
Sbjct: 117 EMYIAIYSERFRDVIMFYE--QGGVDIGDVEEKARTVSVPVQLNENAMTP----SDEELT 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           +L   L+     R         LYKA+ D   + LEINP +++ N ++ VLD     D+ 
Sbjct: 171 TLLGPLKDSDIVR----RFVVELYKAYKDLHFTYLEINPFVLLNN-QIHVLDLAARLDET 225

Query: 232 ALY----------------RHLDIQEL--RDVSEEDS--REIEAKQH---NLSYIALDGN 268
           A +                 H++      RD++ E+    E++AK      L+ +   G 
Sbjct: 226 ANFLCADKWKSRLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGR 285

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSS------ 320
           +  MV G G ++   D +   GGA   AN+ +  G   + +     K + S  +      
Sbjct: 286 VWTMVAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRP 345

Query: 321 ------VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
                 + G + N       FGGI+R     +  +S +KE K+ I   +R  G N   G 
Sbjct: 346 DGKVLIIGGSIANFTNVAKTFGGIVRA---FETFVSKLKEHKVTI--FVRRGGPNYQEGL 400

Query: 369 RLIAES 374
           R I ++
Sbjct: 401 RRIKDA 406


>gi|291237585|ref|XP_002738714.1| PREDICTED: acly protein-like [Saccoglossus kowalevskii]
          Length = 1092

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 37/291 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCD 175
           E+Y+ +   R S  + F    +GG+DI +V  D     F++ +D  + VT+++V   L  
Sbjct: 116 EMYVCIYSSRNSDTILFYH--EGGVDIGDV--DTKAVKFEVQVDFDMVVTADEVKQKLLM 171

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            +  + Q  + G      LYK +     + LEINPL++    ++ VLD     D  A + 
Sbjct: 172 KVPKEKQDMVAG--FIVALYKQYTALYFTYLEINPLVV--TDKIYVLDLAAKLDQTAEFI 227

Query: 235 ---RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
              +  DI       R+   E++   +++AK      L+ +  +G I  MV G G ++  
Sbjct: 228 CKVKWGDITFPPPFGREAFPEEAYIADLDAKSGASLKLTILNPNGRIWTMVAGGGASVIY 287

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQDKVAAAFK----IITSDSSVKGILINIFGG----I 332
            D I   GGA   AN+ +  G   + +     K    ++T      G  I I GG     
Sbjct: 288 SDTICDLGGASELANYGEYSGAPSEQQTYEYAKTVLGLMTRRPHPSGEKILIIGGGIANF 347

Query: 333 MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
                  KGI+ A+KE +     +N  + +R  G N   G R++ E G N+
Sbjct: 348 TNVAATFKGIVRALKEYQQKLKDVNASVYVRRGGPNYQEGLRVMRELGQNL 398


>gi|307109538|gb|EFN57776.1| hypothetical protein CHLNCDRAFT_56081 [Chlorella variabilis]
          Length = 458

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 166/438 (37%), Gaps = 83/438 (18%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAE--SAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+ +        +P+A   V  + + AE  +A   +     VVK     G
Sbjct: 5   KIREYDSKRLLKAHIARLAGLQLPIAVAQVKEATNFAELVAANPWMNQTQLVVKPDCLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D+ G  +   +  + + D+   +G             R+N   VE   
Sbjct: 65  KRGKHDLVGLKLDATGAQQFIQARMNKVVDMDGTVG-------------RINTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL +   R +  ++F  S  GGM+IEE       K+  + I      +S  +A 
Sbjct: 112 AHAEEYYLCIQSGRLADTLSF--SEFGGMEIEENW----DKVRTVSIPTGAEPSSAPLAP 165

Query: 173 LCDML--ELQGQARID---------GGDLFPN-----------------LYKAFCDKDMS 204
           L   L  EL+   R+          GG L                    L   + D D +
Sbjct: 166 LLSTLPLELRPTWRLSSRPRTRQAGGGGLRWAGEERCNSRLGTGFGCAVLVAVYLDLDFT 225

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYR--------HLDIQELRDVSEEDSR----- 251
           LLE+NP  + + G+   LD +   DD A +R           +   R ++ +++R     
Sbjct: 226 LLEMNPFTLDQAGKPFPLDMRGELDDTAAFRSAKKWGDVEFPLPFGRTMTPQEARIHSLD 285

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVA 309
           E       LS +   G I  MV G G ++   D +   G A    N+ +  GG +  +  
Sbjct: 286 EATGASLKLSILNPRGRIWTMVAGGGASVIYADTVADLGYAEELGNYAEYSGGPNTAETY 345

Query: 310 AAFKII----TSDSSVKGILINIFGGIMR-CDV--LVKGILSAVKEVK-----INIPLVM 357
              + +    T+ +  +G  + + GGI    DV    KGI+ A +E +       + + +
Sbjct: 346 QYARTLLDAATAYADGRGRALIVGGGIANFTDVAATFKGIIQAFREKQEAIKAARMKIFV 405

Query: 358 RLEGANVDIGNRLIAESG 375
           R  G N   G  ++   G
Sbjct: 406 RRGGPNYQAGLEMMRRLG 423


>gi|308489338|ref|XP_003106862.1| hypothetical protein CRE_17185 [Caenorhabditis remanei]
 gi|308252750|gb|EFO96702.1| hypothetical protein CRE_17185 [Caenorhabditis remanei]
          Length = 1112

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 56/302 (18%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCD 175
           E+Y+++  +RT  ++ F     GG+DI +V +        + +D   +  + E++++L  
Sbjct: 117 EMYIAIFSERTRDVIMFYE--HGGVDIGDVEEKARSVSIPVQLDNKAMSPSDEELSTLLG 174

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            ++     R         LYKA+ D   + LEINP +++ N ++ VLD     D+ A + 
Sbjct: 175 PVKDSELIR----KFVVELYKAYKDLHFTYLEINPFVLLNN-QIHVLDLAAKLDETANFL 229

Query: 235 ---------------RHLDIQEL--RDVSEEDS--REIEAKQH---NLSYIALDGNIGCM 272
                           H++      RD++ E+    +++AK      L+ +   G +  M
Sbjct: 230 CADKWKSRLTPYGGPNHVEFPAPFGRDLTTEEQYISDMDAKTGASLKLTILNRKGRVWTM 289

Query: 273 VNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSS---------- 320
           V G G ++   D +   GGA   AN+ +  G   + +     K I S  +          
Sbjct: 290 VAGGGASVVFTDTVCDLGGATELANYGEYSGDPSESQTYEYAKTILSVMTEGAPRPDGKV 349

Query: 321 --VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIA 372
             + G + N       FGGI+R     +  +S +KE K+ I   +R  G N   G R I 
Sbjct: 350 LIIGGSIANFTNVAKTFGGIVRA---FETFVSKLKEHKVTI--FVRRGGPNYQEGLRRIK 404

Query: 373 ES 374
           ++
Sbjct: 405 DA 406


>gi|195425586|ref|XP_002061078.1| GK10643 [Drosophila willistoni]
 gi|194157163|gb|EDW72064.1| GK10643 [Drosophila willistoni]
          Length = 1095

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     +   DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSKLAQADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI   +    LY  F D   + LEINP+++  +  L +LD     D  A  
Sbjct: 172 EVTDSAKKERI--ANFITALYATFVDLYFTYLEINPVVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S    +G ++   GGI  
Sbjct: 289 YSDTICDLGGATELANYGEYSGAPSEQQTYEYAKTILTLMTSSPKHPEGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                   +GI++A++E     V+ N+ + +R  G N   G R + + G  ++
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRRMRDFGATLL 401


>gi|195121624|ref|XP_002005320.1| GI20417 [Drosophila mojavensis]
 gi|193910388|gb|EDW09255.1| GI20417 [Drosophila mojavensis]
          Length = 1097

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y+ +   R++  + F    QGG+DI +V  D       + +D  + +       L  +
Sbjct: 118 EMYVCIYSHRSADTILFYH--QGGVDIGDV--DAKAVKLDVKVDSTLSLADVKTTLLKAI 173

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---- 232
            +   + RI        LY  F D   + LEINPL++  +  L +LD     D  A    
Sbjct: 174 TDASKKERI--AKFIYGLYATFADLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADFIC 230

Query: 233 --LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
              +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++   
Sbjct: 231 RPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 290

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI---M 333
           D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI    
Sbjct: 291 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIANFT 350

Query: 334 RCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                 +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 351 NVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRRMRDFG 397


>gi|115621242|ref|XP_791999.2| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus
           purpuratus]
 gi|115925081|ref|XP_001197442.1| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus
           purpuratus]
          Length = 1042

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 36/289 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R S ++ F  + +GG+D+ +V      K  KL I     +T+E + +    
Sbjct: 69  EFYVCIYCQRASDVILF--THEGGVDVGDVD----AKAVKLEIGLQEEITAEGIKTALLS 122

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
               G+  +  G +  +LY+ F D   + LEINPL++    ++ VLD     D  A Y  
Sbjct: 123 NVTAGKKEMVAGFVL-DLYQRFRDLYFTYLEINPLVVTD--KVYVLDLAAKIDATAEYLC 179

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  D++      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 180 KVQWGDLEFPPPFGREAFPEEAYIADLDAKSGASLKLTILNPVGRIWTMVAGGGASVIYS 239

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMRCDV 337
           D I   GGA   AN+ +  G   + +     K I    T +    G ++ I GGI     
Sbjct: 240 DTICDLGGAAELANYGEYSGAPSEGQTYEYAKTILGLMTREQHPDGKVLIIGGGIANFTN 299

Query: 338 L---VKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           +    KGI+ A+K+     ++  + + +R  G N   G R++ E G N+
Sbjct: 300 VASTFKGIVKALKQFREKLIEFRVSIYVRRGGPNYQEGLRVMRELGGNL 348


>gi|194756204|ref|XP_001960369.1| GF13329 [Drosophila ananassae]
 gi|190621667|gb|EDV37191.1| GF13329 [Drosophila ananassae]
          Length = 1097

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 39/292 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL I     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDIPVNASLSLADVKSKLLV 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ + + + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAKVKERI--AKFISALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPAGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
                   +GI++A++E     V+ N+ + +R  G N   G R + + G  +
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFGTTL 400


>gi|237874159|ref|NP_001153852.1| ATP citrate lyase [Acyrthosiphon pisum]
          Length = 1092

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCD 175
           E Y+ +   R +  + F    +GG+DI +V      K  KL +     VT E +   L  
Sbjct: 117 EAYVCIYSHRHADTILF--HHEGGVDIGDVDA----KALKLEVPIGQSVTEEQILEKLLT 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-----LDSKISFDD 230
            +    Q  I        LYK + +   + LEINPL++  +    +     +DS   F  
Sbjct: 171 KVSPAKQKTI--ATFIVALYKMYVNLYFTYLEINPLVVTDSAIYILDLAAKIDSTADFIC 228

Query: 231 NALYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
            A +  ++      RD   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 229 RASWGEIEYPPPFGRDAFPEEAYIADLDAKSGASLKLTILNKKGRIWTMVAGGGASVIYA 288

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI---MR 334
           D I  YGGA   AN+ +  G   + +     K I    T +    G ++   GGI     
Sbjct: 289 DTICDYGGASELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPDGKVLITGGGIANFTN 348

Query: 335 CDVLVKGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLIAESG 375
                KGI++A+ E +      NI + +R  G N   G R+I E G
Sbjct: 349 VAATFKGIVTALTEYQTKILDHNITIYVRRAGPNYQEGLRIIREVG 394


>gi|309366645|emb|CAP21104.2| hypothetical protein CBG_24512 [Caenorhabditis briggsae AF16]
          Length = 1106

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 56/302 (18%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCD 175
           E+Y+++  +R+  ++ F     GG+DI +V +        + +D   + ++ E++  L  
Sbjct: 117 EMYIAIFSERSRDVIMFYE--HGGVDIGDVEEKARSVSISVQLDNKAMAISEEELTHLLG 174

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            ++     R         LY A+ D   + LEINP +++ N ++ VLD     D+ A + 
Sbjct: 175 PVKDNKVVR----KFVLELYGAYKDLHFTYLEINPFVVL-NDKVHVLDLAAKLDETANFL 229

Query: 236 HLDIQEL------------------RDVSEEDS--REIEAKQH---NLSYIALDGNIGCM 272
             D  E                   RD++ E+    +++AK      L+ +   G +  M
Sbjct: 230 CADKWESRMTPYGGPNHVEFPAPFGRDLTSEEQYISDMDAKTGASLKLTILNRKGRVWTM 289

Query: 273 VNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSS---------- 320
           V G G ++   D +   GGA   AN+ +  G   + +     K I S  +          
Sbjct: 290 VAGGGASVVFTDTVCDLGGATELANYGEYSGDPSESQTYEYAKTILSVMTEGAPRPDGKV 349

Query: 321 --VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIA 372
             + G + N       FGGI+R     +  +S +KE K+ I   +R  G N   G R I 
Sbjct: 350 LIIGGSIANFTNVAKTFGGIVRA---FESFVSKLKEHKVTI--FVRRGGPNYQEGLRKIK 404

Query: 373 ES 374
           ++
Sbjct: 405 DA 406


>gi|268569740|ref|XP_002648327.1| Hypothetical protein CBG24512 [Caenorhabditis briggsae]
          Length = 1112

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 56/302 (18%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCD 175
           E+Y+++  +R+  ++ F     GG+DI +V +        + +D   + ++ E++  L  
Sbjct: 124 EMYIAIFSERSRDVIMFYE--HGGVDIGDVEEKARSVSISVQLDNKAMAISEEELTHLLG 181

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            ++     R         LY A+ D   + LEINP +++ N ++ VLD     D+ A + 
Sbjct: 182 PVKDNKVVR----KFVLELYGAYKDLHFTYLEINPFVVL-NDKVHVLDLAAKLDETANFL 236

Query: 236 HLDIQEL------------------RDVSEEDS--REIEAKQH---NLSYIALDGNIGCM 272
             D  E                   RD++ E+    +++AK      L+ +   G +  M
Sbjct: 237 CADKWESRMTPYGGPNHVEFPAPFGRDLTSEEQYISDMDAKTGASLKLTILNRKGRVWTM 296

Query: 273 VNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSS---------- 320
           V G G ++   D +   GGA   AN+ +  G   + +     K I S  +          
Sbjct: 297 VAGGGASVVFTDTVCDLGGATELANYGEYSGDPSESQTYEYAKTILSVMTEGAPRPDGKV 356

Query: 321 --VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIA 372
             + G + N       FGGI+R     +  +S +KE K+ I   +R  G N   G R I 
Sbjct: 357 LIIGGSIANFTNVAKTFGGIVRA---FESFVSKLKEHKVTI--FVRRGGPNYQEGLRKIK 411

Query: 373 ES 374
           ++
Sbjct: 412 DA 413


>gi|225851245|ref|YP_002731479.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage
           enzyme) [Persephonella marina EX-H1]
 gi|225645643|gb|ACO03829.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage
           enzyme) [Persephonella marina EX-H1]
          Length = 436

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 29/216 (13%)

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQEL-- 242
            D    LYK F D   + LEINPL +M + ++  LD     DD A +   R     E   
Sbjct: 190 ADFVFRLYKLFRDLHFTYLEINPL-VMVDSKIYPLDFVGRVDDTAQFVAGRKWGDLEFPA 248

Query: 243 ---RDVSEEDS--REIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP- 293
              RD++ E+   +E++ K      L+ +  +G I  +V G G ++   D +   G    
Sbjct: 249 GFGRDLTPEEKYIKEMDEKSGASLKLTILNPEGRIWTLVAGGGASVVYADTVADLGYVKE 308

Query: 294 -ANFLDVGGGAD----QDKVAAAFKIITSDSSVKGILINIFGGIMR--CDV--LVKGILS 344
            AN+ +  G       ++ V   F ++T     KG  I I GG +    DV     GI+ 
Sbjct: 309 LANYGEYSGNPSRAETREYVKTVFDLMTRSKHPKGHKILIIGGAIANFTDVAKTFDGIID 368

Query: 345 AVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
           A+KE      +I + + +R  G N ++G + I E+ 
Sbjct: 369 AMKEYADKLREIGVRIYVRRGGPNYEVGLKRIKEAA 404


>gi|300980469|ref|ZP_07175016.1| hypothetical protein HMPREF9553_01584 [Escherichia coli MS 200-1]
 gi|300307771|gb|EFJ62291.1| hypothetical protein HMPREF9553_01584 [Escherichia coli MS 200-1]
          Length = 66

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 12/74 (16%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
          MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1  MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59 FKELPADSKGGVRV 72
                   GGV+V
Sbjct: 60 ---------GGVKV 64


>gi|195171228|ref|XP_002026409.1| GL20648 [Drosophila persimilis]
 gi|194111311|gb|EDW33354.1| GL20648 [Drosophila persimilis]
          Length = 1069

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R++  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRSADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSDLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  F D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDASQKERI--AKFIGALYATFVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRRMRDFG 397


>gi|125811843|ref|XP_001362021.1| GA20986 [Drosophila pseudoobscura pseudoobscura]
 gi|54637198|gb|EAL26601.1| GA20986 [Drosophila pseudoobscura pseudoobscura]
          Length = 1087

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R++  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRSADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSDLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  F D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDASQRERI--AKFIGALYATFVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRRMRDFG 397


>gi|156547848|ref|XP_001604320.1| PREDICTED: similar to ENSANGP00000012364 [Nasonia vitripennis]
          Length = 1087

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 34/286 (11%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   RT+  + F    +GG+DI +V      K  KL +     +  E   +   +
Sbjct: 117 EAYVCIYSHRTADTILF--HHEGGVDIGDVDA----KALKLEVPVDSDIPDESTITSRLL 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-R 235
             +    +        +LYK + D   + LEINPL++  +  + +LD     D  A +  
Sbjct: 171 AHVANDKKPVIAKFIQSLYKLYVDLYFTYLEINPLVVTDDS-IYILDLAAKLDTTADFIC 229

Query: 236 HLDIQEL-------RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             D  E+       RD   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 RPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNPSGRIWTMVAGGGASVIYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI---MR 334
           D I   GGA   AN+ +  G   + +     K I    T +    G ++ + GGI     
Sbjct: 290 DTICDLGGASELANYGEYSGAPSEQQTYEYAKTILGLMTKERHPDGKVLIVGGGIANFTN 349

Query: 335 CDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++     V+ +I + +R  G N   G R+I E G
Sbjct: 350 VAATFKGIVKALQQFQPKLVEHDIKIFVRRAGPNYQEGLRIIREVG 395


>gi|294876809|ref|XP_002767806.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
 gi|239869666|gb|EER00524.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
          Length = 84

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 13/76 (17%)

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           ++EINP   +K+GR+              +R   I     +++       A + +L+YI 
Sbjct: 1   MVEINPRAEIKDGRV-------------TFRQKHIFSQETLAKRIPEMFAAFEWDLNYIG 47

Query: 265 LDGNIGCMVNGAGLAM 280
           LDG+IGCMVNGAGLAM
Sbjct: 48  LDGSIGCMVNGAGLAM 63


>gi|320532400|ref|ZP_08033239.1| ATP-grasp domain protein [Actinomyces sp. oral taxon 171 str.
          F0337]
 gi|320135387|gb|EFW27496.1| ATP-grasp domain protein [Actinomyces sp. oral taxon 171 str.
          F0337]
          Length = 65

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
          M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1  MDLYEYQARNLFRQHGVPVLDGAVATTPEEARSAAQSLLDAGSELVVVKAQVKTGGRGKA 60


>gi|312370903|gb|EFR19206.1| hypothetical protein AND_22915 [Anopheles darlingi]
          Length = 891

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 34/277 (12%)

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           TS M   +   QGG+DI +V      K  KL +     V+  D+  +  + E+ G  +  
Sbjct: 51  TSVMDTILFYHQGGVDIGDVD----SKALKLDVPVGQDVSLADIEKVL-LTEISGAKKQR 105

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL 242
             +   NLY+ + D   + LEINPL++  N  + +LD     D  A +    +  DI   
Sbjct: 106 IANFVYNLYRMYVDMYFTYLEINPLVV-TNDSIYILDLAAKLDATADFICRPKWGDIDYP 164

Query: 243 ----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
               RD   E++   +++AK      L+ +  +G I  MV G G ++   D I   GGA 
Sbjct: 165 PPFGRDAFPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGAT 224

Query: 294 --ANFLDVGGGADQDKVAAAFKIITS--DSSVK---GILINIFGGI---MRCDVLVKGIL 343
             AN+ +  G   + +     K I S   SS K   G ++   GGI           GI+
Sbjct: 225 ELANYGEYSGAPSEQQTYEYAKTILSLMTSSPKHPDGKVLITGGGIANFTNVAATFSGII 284

Query: 344 SAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           +A++E     +   + + +R  G N   G R + E G
Sbjct: 285 TALREYQQKLIDHKVSIFVRRAGPNYQEGLRKMREIG 321


>gi|194882681|ref|XP_001975439.1| GG22311 [Drosophila erecta]
 gi|190658626|gb|EDV55839.1| GG22311 [Drosophila erecta]
          Length = 1095

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           ++ +   + RI        LY  + D   + LEINPL+++ +  L +LD     D  A +
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVIAD-NLYILDLAAKLDSTADF 228

Query: 235 ----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
               +  DI       RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGDIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGATELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|313214854|emb|CBY41091.1| unnamed protein product [Oikopleura dioica]
          Length = 70

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 34/56 (60%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
          ++IHEY +  LL +Y V   +G + +S   A    K LP P  VVK+Q+ AGGRGK
Sbjct: 15 LSIHEYMSFNLLNQYGVKTPEGHMATSPEQAFDIAKNLPTPDCVVKAQVLAGGRGK 70


>gi|117926913|ref|YP_867530.1| ATP-grasp domain-containing protein [Magnetococcus sp. MC-1]
 gi|117610669|gb|ABK46124.1| ATP-grasp domain protein [Magnetococcus sp. MC-1]
          Length = 424

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 17/214 (7%)

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
           K V + ++E         Q G   ++   V  E   +   E+Y S+  D T      +  
Sbjct: 66  KDVQTALKEKERLYFAEHQHGNAYAKAEGVTFESFVEAKYEVYFSI-TDSTKYRAPTVTI 124

Query: 137 TQ-GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
           T  GG+DIEE+    P+KI  +  DPL G     V++    L    +         P L+
Sbjct: 125 THHGGVDIEELP---PEKIATVPFDPLTGFKGFVVSNALTRLGAPNEIISPLVQNLPKLW 181

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVL----DSKISFD-DNALYRHLDIQELRDVSEEDS 250
             + +  M+ LE+NP+ +M +   R++    D K SFD D+     L++    D+++  +
Sbjct: 182 DLYHNYGMTTLELNPIRMMPDASGRLVPVACDFKCSFDGDDPNVERLNLPTDLDMADYSN 241

Query: 251 REIEAK-------QHNLSYIALDGNIGCMVNGAG 277
            E+E         Q ++  I   G+I  M  G G
Sbjct: 242 FEMEVNQLRTYQGQSDVYVINDQGSITAMTFGGG 275


>gi|186470804|ref|YP_001862122.1| ATP-grasp domain-containing protein [Burkholderia phymatum STM815]
 gi|184197113|gb|ACC75076.1| ATP-grasp domain protein [Burkholderia phymatum STM815]
          Length = 432

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 94/243 (38%), Gaps = 18/243 (7%)

Query: 101 SRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
           ++ N V  E G     E+Y S+             S  GGMDIEEV    PQ +  +  D
Sbjct: 90  AKANGVTFEAGVPAKHEVYFSITDSTRFRAPTMTLSHMGGMDIEEVD---PQHVAMVPFD 146

Query: 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM--KNGR 218
            L G+ +  VA+    +    +         P L++ F D  M+ LE+NP+ +   K GR
Sbjct: 147 ALTGLKAFVVANALSEIGAPREIISPLVQQLPKLWELFHDFGMTTLELNPIRMREDKKGR 206

Query: 219 LR--VLDSKISFDDN-------ALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGN 268
           L     D K  FD +        L  HL   +  D  +E +       Q ++  I   G 
Sbjct: 207 LTPVACDFKCGFDRDDPRFSRLGLPPHLFAADYSDFEQEINQLRTHQGQSDVYVINERGT 266

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           I     G G   A   + ++ G A     D GG    +K+    +I       +  ++ I
Sbjct: 267 ILAPTFGGG---ANSLVTEMLGDAAIISSDFGGNPPYEKMKEVARICFRHWLKQSNVLFI 323

Query: 329 FGG 331
            GG
Sbjct: 324 IGG 326


>gi|195583780|ref|XP_002081694.1| GD25577 [Drosophila simulans]
 gi|194193703|gb|EDX07279.1| GD25577 [Drosophila simulans]
          Length = 1095

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|195334759|ref|XP_002034044.1| GM20101 [Drosophila sechellia]
 gi|194126014|gb|EDW48057.1| GM20101 [Drosophila sechellia]
          Length = 1095

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|281363473|ref|NP_523755.2| ATP citrate lyase, isoform D [Drosophila melanogaster]
 gi|281363475|ref|NP_001137674.2| ATP citrate lyase, isoform E [Drosophila melanogaster]
 gi|28372804|gb|AAD34754.2| LD21334p [Drosophila melanogaster]
 gi|272432502|gb|AAF58082.2| ATP citrate lyase, isoform D [Drosophila melanogaster]
 gi|272432503|gb|ACL83128.2| ATP citrate lyase, isoform E [Drosophila melanogaster]
          Length = 1112

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|270008566|gb|EFA05014.1| hypothetical protein TcasGA2_TC015096 [Tribolium castaneum]
          Length = 1089

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 37/288 (12%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLC 174
            E+Y+ +   R    + F    QGG+DI +V      K  KL +     V  + +  +L 
Sbjct: 116 EEVYVCIYSHRHGDTILFYH--QGGVDIGDVD----SKAVKLEVPVGESVDEKRITEALL 169

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
             ++   +A I   +   NLYK + D   + LEINPL++ +   + VLD     D  A  
Sbjct: 170 SQVDASKKAMI--ANFVNNLYKLYVDLYFTYLEINPLVVTQK-EIYVLDLAAKLDATADF 226

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
               ++  +D      RD   E++   ++++K      L+ +   G I  MV G G ++ 
Sbjct: 227 ICKPMWGEIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKSGRIWTMVAGGGASVI 286

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI--- 332
             D I   GGA   AN+ +  G   + +     K I    T +   +G ++   GGI   
Sbjct: 287 YSDTICDLGGAKELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGKVLITGGGIANF 346

Query: 333 MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                  +GI++A+ E     ++  + + +R  G N   G R + E G
Sbjct: 347 TNVAATFRGIITALVEFQQRLIEHKVSIFVRRAGPNYQEGLRRMREVG 394


>gi|281363477|ref|NP_725514.2| ATP citrate lyase, isoform F [Drosophila melanogaster]
 gi|272432504|gb|AAM70940.2| ATP citrate lyase, isoform F [Drosophila melanogaster]
          Length = 1095

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|189238364|ref|XP_001808341.1| PREDICTED: similar to ATP-citrate synthase [Tribolium castaneum]
          Length = 1092

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 37/288 (12%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLC 174
            E+Y+ +   R    + F    QGG+DI +V      K  KL +     V  + +  +L 
Sbjct: 116 EEVYVCIYSHRHGDTILFYH--QGGVDIGDVD----SKAVKLEVPVGESVDEKRITEALL 169

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
             ++   +A I   +   NLYK + D   + LEINPL++ +   + VLD     D  A  
Sbjct: 170 SQVDASKKAMI--ANFVNNLYKLYVDLYFTYLEINPLVVTQK-EIYVLDLAAKLDATADF 226

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
               ++  +D      RD   E++   ++++K      L+ +   G I  MV G G ++ 
Sbjct: 227 ICKPMWGEIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKSGRIWTMVAGGGASVI 286

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI--- 332
             D I   GGA   AN+ +  G   + +     K I    T +   +G ++   GGI   
Sbjct: 287 YSDTICDLGGAKELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGKVLITGGGIANF 346

Query: 333 MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                  +GI++A+ E     ++  + + +R  G N   G R + E G
Sbjct: 347 TNVAATFRGIITALVEFQQRLIEHKVSIFVRRAGPNYQEGLRRMREVG 394


>gi|51092031|gb|AAT94429.1| RE70805p [Drosophila melanogaster]
          Length = 1112

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|195488393|ref|XP_002092296.1| GE14108 [Drosophila yakuba]
 gi|194178397|gb|EDW92008.1| GE14108 [Drosophila yakuba]
          Length = 1096

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LC 174
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV S  L 
Sbjct: 118 EMYVCIYSHRAADTILFYH--QGGVDIGDVD----AKAVKLDVPVNSSLSLADVKSKLLK 171

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-- 232
           ++ +   + RI        LY  + D   + LEINPL++  +  L +LD     D  A  
Sbjct: 172 EVKDAGTKERI--AKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADF 228

Query: 233 ----LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++ 
Sbjct: 229 ICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVI 288

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI-- 332
             D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI  
Sbjct: 289 YSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIAN 348

Query: 333 -MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                   +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 349 FTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|195383876|ref|XP_002050651.1| GJ20089 [Drosophila virilis]
 gi|194145448|gb|EDW61844.1| GJ20089 [Drosophila virilis]
          Length = 1098

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y+ +   R++  + F     GG+DI +V  D      ++ +D  + +       L  +
Sbjct: 118 EMYVCIYSHRSADTILFYH--LGGVDIGDV--DAKAVKLEVPVDSTLSLADVKTTLLKAI 173

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---- 232
            +   + RI        LY  F D   + LEINPL++  +  L +LD     D  A    
Sbjct: 174 TDASKKERI--AKFIYALYATFADLYFTYLEINPLVVTAD-NLYILDLAAKLDSTADFIC 230

Query: 233 --LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
              +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++   
Sbjct: 231 RPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 290

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGI---M 333
           D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI    
Sbjct: 291 DTICDLGGATELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIANFT 350

Query: 334 RCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                 +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 351 NVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRRMRDFG 397


>gi|224372752|ref|YP_002607124.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia
           profundicola AmH]
 gi|223588537|gb|ACM92273.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia
           profundicola AmH]
          Length = 444

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 135/341 (39%), Gaps = 50/341 (14%)

Query: 3   IHEYQAKALLR----KY----NVPVAKGVVISS----VHAAESAIKTLPGPLYVVKSQIH 50
           I EY  K L      KY    N P    +V S       A E   + L     V K  + 
Sbjct: 6   IREYDGKKLFAQNWDKYFSGLNYPFESVLVTSGDELRAKAKEPGYEWLNEKPLVAKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +  D +     TL++ Q+G     +   +   
Sbjct: 66  FGKRGKNNLVLFKVNKPGDVTLEDAAKWI--DEKRSGKVTLLSGQSGELTHFIVEPFTPH 123

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
             D   E Y++         V ++ S  GGM++EE       K+ ++ I   I  + E++
Sbjct: 124 SED--EEYYIAATTFDEVNDVLYL-SAHGGMEVEENW----DKVTEVKIP--IDASDEEI 174

Query: 171 ASLCDMLELQGQARIDGGDLFPNL----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
             L     +      D  D++ N     YK F D + + LEINP++I+ N  + +LD   
Sbjct: 175 EKLVKE-NIPADIPADKKDVYANFAINFYKFFRDLNFAYLEINPVVIVGN-NVYLLDLVA 232

Query: 227 SFDDNALY----RHLDIQ------------ELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
             DD A +    +  DI+            E + ++E D++        L+ +   G I 
Sbjct: 233 RLDDTAGFMMKDKWGDIEFPTPFGMPEKSPEEKAIAEADAK--SGASLKLTILNPKGRIW 290

Query: 271 CMVNGAGLAMATMDII-KLYGGAP--ANFLDVGGGADQDKV 308
            +V G G ++   D I  + GG    AN+ +  GG   D+ 
Sbjct: 291 TLVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDET 331


>gi|307181417|gb|EFN69012.1| ATP-citrate synthase [Camponotus floridanus]
          Length = 819

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 40/290 (13%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEV-AKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            E+Y+ +   R +  + F    QGG+DI +V AK        L +D  +G    D + L 
Sbjct: 116 EEVYICIYSHRKADTILF--HHQGGVDIGDVDAK-------ALKLDIPVGGELPDRSILI 166

Query: 175 DML--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           + L   +    ++   +   +LYK + +   + +EINPL++  +  + +LD     D  A
Sbjct: 167 NKLLVNVADDKKVMIAEFIESLYKLYVNLYFTYMEINPLVVTDSA-IYILDLAAKLDTTA 225

Query: 233 LY-RHLDIQEL-------RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +    D  E+       RD   E++   +++AK      L+ +  +G I  MV G G +
Sbjct: 226 DFICKPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNPNGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI- 332
           +   D I   G A   AN+ +  G   + +     K I    T      G ++ I GGI 
Sbjct: 286 VIYSDTICDLGAADELANYGEYSGAPSEQQTYEYAKTILSLMTKTKHSNGKVLIIGGGIA 345

Query: 333 --MRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A++E     V+ +I + +R  G N   G R+I E G
Sbjct: 346 NFTNVAATFKGIVKALQEYQPKLVEHDIRIFVRRAGPNYQEGLRIIREVG 395


>gi|326432316|gb|EGD77886.1| acly protein [Salpingoeca sp. ATCC 50818]
          Length = 1083

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 40/337 (11%)

Query: 68  GGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYV-EDGADILRELYLSLLVD 125
           G V+V+   +   + + E + STL I   TG     V   +V  + +D   E Y  +   
Sbjct: 70  GLVKVKVDFEGAKTWVNEKMNSTLQIGSATGTLKHFVLEPFVAHEQSD---EHYCCIYAG 126

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           R    + F    +GG+DI +V     +   +L   P      E + +  D    Q  A  
Sbjct: 127 RDFNTILF--HHEGGVDIGDVDAKAARMEVQLDTKPTPDQIRESLLTHLDASRQQVVA-- 182

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR-HLDIQEL-- 242
              D    LY  F D   + +EINP+++ K+  + +LD     D  A Y  H     +  
Sbjct: 183 ---DFLSQLYALFIDLHFTYMEINPIVV-KDNEVYILDLAAKLDQTAEYLCHNKWGAITF 238

Query: 243 -----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
                RD   E++   E++AK      L+ +   G I  MV G G ++   D I   GGA
Sbjct: 239 PPPFGRDALPEEAYIAELDAKSGASLKLTILNPRGRIWTMVAGGGASVVYSDTICDLGGA 298

Query: 293 P--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              AN+ +  G   + +     K I    T ++   G ++ I GGI     +    KGI+
Sbjct: 299 SELANYGEYSGAPSESQTFEYAKTILSLMTREAHPDGKVLIIGGGIANFTNVASTFKGII 358

Query: 344 SAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
            A+ E      +  + + +R  G N   G + + ++G
Sbjct: 359 RALDEYHGILHEQKVKIFVRRGGPNFQEGLKCMRDAG 395


>gi|320170052|gb|EFW46951.1| ATP citrate-lyase [Capsaspora owczarzaki ATCC 30864]
          Length = 1105

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 38/290 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCD 175
           E Y+ +L +R    + F    +GG+DI +V      K  +L+++   IG  S     + +
Sbjct: 127 EYYICILSERDGDEILF--HHEGGVDIGDVDA----KAVRLMVNVKEIGAQSVTPQLIRE 180

Query: 176 -MLELQGQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
            +L+    AR +   +   +LYK +     + LEINPL+++   ++ VLD     D  A 
Sbjct: 181 QLLQKVPAARQEFLANFIHSLYKLYVALFFTYLEINPLVVVGT-QVHVLDLAAKLDQTAE 239

Query: 234 YR---------HLDIQELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLA 279
           +                 R+ S E+    E  Q + S + L      G I  MV G G +
Sbjct: 240 FECKPYWAEKIEFPPPFGREASAEERYIAELDQKSGSSLKLTILNRKGRIWTMVAGGGAS 299

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIFGGIM 333
           +   D I   GGA   AN+ +  G   + +         K +T +   +G ++ I GGI 
Sbjct: 300 VVYSDTICDLGGAAELANYGEYSGAPSESQTYEYAKTILKCMTDERDERGKVLIIGGGIA 359

Query: 334 RCDVL---VKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
               +    KGI+ A+KE     V+  I + +R  G N   G R++ + G
Sbjct: 360 NFTNVADTFKGIVRALKEFQKLIVEHGISIYVRRGGPNYQEGLRIMRDLG 409


>gi|83588808|gb|ABC25000.1| ATP-specific succinyl-CoA synthetase beta subunit [Bos taurus]
          Length = 141

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLI 92
              +  KGGV++  S +   +   +++G  L 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLF 141


>gi|78221528|ref|YP_383275.1| ATP citrate lyase subunit 1 [Geobacter metallireducens GS-15]
 gi|78192783|gb|ABB30550.1| ATP citrate lyase subunit 1 [Geobacter metallireducens GS-15]
          Length = 423

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y+S+       M   + +T+GG+D+E+V    P+    ++ +P+ GV S  +      
Sbjct: 107 EIYVSISESSEYRMPVLLLTTKGGVDVEDVP---PEDKRTIVFNPVTGVKSFHINDALRE 163

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVL--DSKISFD-DNA 232
           L+   Q         P L++ + +  ++ LE+NP+ + K  GR      D K SFD DN 
Sbjct: 164 LKCPPQYISSLVQHLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNP 223

Query: 233 LYRHLDIQE-------LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDI 285
            ++ L   E        +  SE +       Q +++ +   G I   + G G   A  +I
Sbjct: 224 AWKRLGYPEEIFSTTITQFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEI 283

Query: 286 IKLYGGAPANFLDVGGGADQDKVAA 310
           +       ++F   GG    +K+ A
Sbjct: 284 LADRAIISSDF---GGNPPYEKIRA 305


>gi|34558782|gb|AAQ75127.1| citrate lyase subunit 1 [Alvinella pompejana epibiont 6C6]
          Length = 447

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 96/440 (21%), Positives = 171/440 (38%), Gaps = 75/440 (17%)

Query: 3   IHEYQAKALLR--------KYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIH 50
           I EY AK++L         K+N P    +V +     E++  T P     PL V K  + 
Sbjct: 6   IREYDAKSILARHWDRYFPKFNYPYQTVLVETGEQLREASETTHPWLKEKPL-VAKPDML 64

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E +   +  D +      +     G T +       E 
Sbjct: 65  FGKRGKNSLVLFKVNKPGDVTLEDAANWI--DEKRATQQKVYFSFDGDTPAG------EP 116

Query: 111 GADILRELYLSLLVDRTSGMVAFIAST------------QGGMDIEEVAKDYPQKIFKLL 158
             D L    +      +     +I++T            +GGM++EE      +  FK  
Sbjct: 117 SEDYLTHFIVEPFTPHSQDEEYYISATVVGDDDVLYMSAEGGMEVEENWDKVIEVKFK-- 174

Query: 159 IDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
               I  T +D+          +++ + + +  +     +KA+ + + + LEINP  +M+
Sbjct: 175 ----INETEDDIEKKIRENIPADVKEEDKENFAEFAIGFFKAYRELNFAYLEINPF-VMQ 229

Query: 216 NGRLRVLDSKISFDDNALYRHLDIQ-----------ELRDVSEEDSREIEAKQH---NLS 261
           + ++ +LD     DD A +  +D             E +   E+   E ++K      L+
Sbjct: 230 DNKIELLDMVAKLDDTAGFMMVDHWGKIEFPMPFGMEAKSKEEQAVEEADSKTGASLKLT 289

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGAD--QDKVAAA--FKII 315
            +  +  I  MV G G ++   D I  + G    AN+ +  GG    + K  A     ++
Sbjct: 290 VLKPEARIWTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLM 349

Query: 316 TSDSSVKG---ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           T +   +G   ILI I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 350 TREKDTQGREKILI-IGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 408

Query: 365 DIGNRLIAESGLNVITAIDL 384
           + G R I ++   +   ID+
Sbjct: 409 EKGLRDIQDAANRLGLWIDV 428


>gi|149179619|ref|ZP_01858134.1| succinyl-CoA synthetase, beta subunit [Planctomyces maris DSM
          8797]
 gi|148841543|gb|EDL55991.1| succinyl-CoA synthetase, beta subunit [Planctomyces maris DSM
          8797]
          Length = 42

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/42 (54%), Positives = 25/42 (59%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
          MNIHEYQAK LL KY + V  G    +V  A    K LPGPL
Sbjct: 1  MNIHEYQAKELLAKYGIAVPAGHAAMTVEEAVEGAKKLPGPL 42


>gi|115491467|ref|XP_001210361.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
 gi|114197221|gb|EAU38921.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
          Length = 577

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 11/176 (6%)

Query: 102 RVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
           R   + V +      ++YL+L VDRT+     +AST         ++ +P   F      
Sbjct: 391 REKSIPVREATPAESDIYLNLTVDRTALSPCILASTSADFTPAATSR-FP---FPYATTQ 446

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
                +  V ++   L+L   A+    +L   L++ F +K+  LLE+  + +  +G   V
Sbjct: 447 FTDGENSIVEAVASHLQLPPSAKGRLAELIQALWEIFKEKEAYLLEVRTISV--DGAFEV 504

Query: 222 LDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALD--GNIGCM 272
             ++  FDD A     R  ++  LR + EE   E+EA++  + Y+ LD  G+IG +
Sbjct: 505 RGARFGFDDAAFRSSGRQEEVHRLRQLEEEVHEEVEAEKDGIVYVKLDGEGSIGTL 560


>gi|281209473|gb|EFA83641.1| putative ATP citrate synthase [Polysphondylium pallidum PN500]
          Length = 397

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 69/371 (18%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSR 102
           VVK  +  G RGK             V + ++++     I+E +   + I+ + GP    
Sbjct: 28  VVKPDMLFGKRGKNNL----------VLLNANVEQADQFIKERMNKEVDISGKKGP---- 73

Query: 103 VNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
           V    VE       E YLS++  R    ++F  S  GGM+IEE   D+ + +     +P+
Sbjct: 74  VTHFIVEPFVPHTVEYYLSIVAKRDGNTISF--SNVGGMEIEECW-DHVKTLDIPYGEPI 130

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
                 D A+L ++++     R        N+YK F +     +E+NP  + ++G+   L
Sbjct: 131 ------DAANLHELVDSNTSGREFIIQFIRNVYKIFEELSFHFIEMNPFTLDQDGKPFPL 184

Query: 223 DSKISFDDNALY--------------------RHLDIQE--LRDVSEEDSREIEAKQHNL 260
           D +   D+ A +                    R L  +E  + D+ E+    ++     L
Sbjct: 185 DMRGEVDECASFKCGSKWVVDGEPIQFPQPFGRALFPEETFVNDIDEKTGASLK-----L 239

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIK--LYGGAPANFLDVGGGADQDKVAAAFKIITS- 317
           + +  +G I  ++ G G ++   D +    YG    ++ +  G  +++        + S 
Sbjct: 240 TILNPNGRIWPVIAGGGASVIYADTVADLGYGHELGSYGEYSGDPNEEDTHKYASTMLSL 299

Query: 318 -----DSSVKGILINIFGGIMR-CDV--LVKGILSAVKE-----VKINIPLVMRLEGANV 364
                D   + +LI   GGI    DV    KGI+ A+KE     +K N+ + +R  G N 
Sbjct: 300 ATRNPDGRPRALLIG--GGIANFTDVAATFKGIIRAIKEYHEDILKANLHIFVRRGGPNY 357

Query: 365 DIGNRLIAESG 375
             G + + E G
Sbjct: 358 QSGLQHMREIG 368


>gi|152990401|ref|YP_001356123.1| ATP citrate synthase, subunit 1 [Nitratiruptor sp. SB155-2]
 gi|151422262|dbj|BAF69766.1| ATP citrate synthase, subunit 1 [Nitratiruptor sp. SB155-2]
          Length = 443

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 169/424 (39%), Gaps = 70/424 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKG-------VVISS-----VHAAESAIKTLPGPLYVVKSQIH 50
           I EY  K L  +      KG       V+++S       A E   + L     V K  + 
Sbjct: 6   IREYDGKKLFAQNWDKYFKGLKYPFESVLVTSGDELKKKAEEPGYEWLKTKPLVAKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +  D +    +TL++ Q G     +   +   
Sbjct: 66  FGKRGKNNLVLFKVNKPGDVTLEDAAKWI--DEKRNQETTLLSGQKGVLTHFIVEPFTPH 123

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
             D   E Y++      +  V ++ S  GGM++EE       K+ ++ I   I  + E++
Sbjct: 124 SED--EEYYIAATTLDENYDVLYM-SAHGGMEVEENW----DKVTEVKIP--INASDEEI 174

Query: 171 ASL------CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
             L       D+ E + +      +   N YK F D + + LEINP++I+ +  + +LD 
Sbjct: 175 EKLIKENIPADIPEDKKEVY---ANFAVNFYKFFRDLNFAYLEINPVVIVGD-NVYLLDL 230

Query: 225 KISFDDNALYRHLDIQ----------------ELRDVSEEDSREIEAKQHNLSYIALDGN 268
               DD A +   D+                 E + ++E D++        L+ +  +G 
Sbjct: 231 VARLDDTAGFLMKDVWGDIEFPTPFGMPEKSPEEKAIAEADAK--SGASLKLTILNPEGR 288

Query: 269 IGCMVNGAGLAMATMDII-KLYGGAP--ANFLDVGGGADQDK----VAAAFKIITSDSSV 321
           I  +V G G ++   D I  L GG    AN+ +  GG   D+          ++T     
Sbjct: 289 IWTLVAGGGASVVYADTIADLAGGVSELANYGEYSGGPTTDETRFYTETVLDLMTRQKDP 348

Query: 322 KG---ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRL 370
           KG   ILI I G I     + K   GI+ A ++       + + + +R  G N + G + 
Sbjct: 349 KGRDKILI-IGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNYEKGLKD 407

Query: 371 IAES 374
           I E+
Sbjct: 408 IKEA 411


>gi|149195270|ref|ZP_01872359.1| CoA_binding Ligase_CoA Citrate_synt [Caminibacter mediatlanticus
           TB-2]
 gi|149134612|gb|EDM23099.1| CoA_binding Ligase_CoA Citrate_synt [Caminibacter mediatlanticus
           TB-2]
          Length = 444

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 170/425 (40%), Gaps = 72/425 (16%)

Query: 3   IHEYQAKALLR----KY----NVPVAKGVVISSVHAAESAIKTLPG-------PLYVVKS 47
           I EY  K L      KY      P    +V S     E A K  PG       PL V K 
Sbjct: 6   IREYDGKRLFNENWDKYFSGLEYPFESVLVTSGEELKEIANK--PGYEWLKEKPL-VAKP 62

Query: 48  QIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
            +  G RGK        +  G V +E + K +  D +    + L++ Q G     +   +
Sbjct: 63  DMLFGKRGKNNLVLFKVNKPGDVTLEDAAKWI--DEKRAGKTKLLSGQEGVLTHFIVEPF 120

Query: 108 VEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                D   E Y++      +  V ++ S  GGM++EE       K+ ++ I   I  T 
Sbjct: 121 TPHSED--EEYYIAATTFDENYDVLYM-SAHGGMEVEENW----DKVTEVKIP--IDATD 171

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNL----YKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           E++  +     +      D  D + N     YK F D + + LEINP++I+ N ++ +LD
Sbjct: 172 EEIEKIIKE-NIPADIPEDKKDTYANFAINFYKFFRDLNFAYLEINPVVIVGN-KVYLLD 229

Query: 224 SKISFDDNALY----RHLDIQ------------ELRDVSEEDSREIEAKQHNLSYIALDG 267
                DD A +    +  DI+            E + ++E D++        L+ +   G
Sbjct: 230 LVARLDDTAGFLMKDKWGDIEFPTPFGMPEKSPEEKAIAEADAK--TGASLKLTVLNPKG 287

Query: 268 NIGCMVNGAGLAMATMDII-KLYGGAP--ANFLDVGGGADQDK----VAAAFKIITSDSS 320
            I  +V G G ++   D I  L GG    AN+ +  GG   D+          ++T +  
Sbjct: 288 RIWTLVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKD 347

Query: 321 VKG---ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNR 369
            KG   ILI I G I     + K   GI+ A ++       + + + +R  G N + G +
Sbjct: 348 EKGRDKILI-IGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNYEKGLK 406

Query: 370 LIAES 374
            I E+
Sbjct: 407 DIKEA 411


>gi|73294212|gb|AAZ74674.1| ATP citrate lyase beta subunit [Sulfurimonas sp. Go25-1]
          Length = 308

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 29/188 (15%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFP 192
           S +GGM++EE    + +K+ ++     I  T E++A         +++ + + +      
Sbjct: 54  SAEGGMEVEE---GWEEKVTEVAFP--ITATEEEIAEKIKANIPADVKEEDKENFAKFAI 108

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS------ 246
             +KA+ + + + LEINP  +M+  ++ +LD     DD A +  + ++E  DV       
Sbjct: 109 GFFKAYRELNSAYLEINPF-VMQGSKIELLDMVAKLDDTAGF--MTVEEWGDVEYPTAFG 165

Query: 247 -EEDSREIEAKQH---------NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--A 294
            E  S E+EA +           L+ +  +  I  MV G G ++   D I  + G    A
Sbjct: 166 MESKSPEVEAIEEADAKTGASLKLTLLKPEARIWTMVAGGGASVVYADTIADFAGIEDLA 225

Query: 295 NFLDVGGG 302
           N+ +  GG
Sbjct: 226 NYGEYSGG 233


>gi|115693479|ref|XP_001191770.1| PREDICTED: similar to ATP citrate lyase, partial
           [Strongylocentrotus purpuratus]
 gi|115738618|ref|XP_001189521.1| PREDICTED: similar to ATP citrate lyase, partial
           [Strongylocentrotus purpuratus]
          Length = 273

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 29/213 (13%)

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQELRDVSEE 248
           +LY+ F D   + LEINPL++    ++ VLD     D  A Y    +  D++       E
Sbjct: 8   DLYQRFRDLYFTYLEINPLVVTD--KVYVLDLAAKIDATAEYLCKVQWGDLEFPPPFGRE 65

Query: 249 DSRE------IEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFL 297
              E      ++AK      L+ +   G I  MV G G ++   D I   GGA   AN+ 
Sbjct: 66  AFPEEAYIADLDAKSGASLKLTILNPVGRIWTMVAGGGASVIYSDTICDLGGAAELANYG 125

Query: 298 DVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMRCDVL---VKGILSAVKE-- 348
           +  G   + +     K I    T +    G ++ I GGI     +    KGI+ A+K+  
Sbjct: 126 EYSGAPSEGQTYEYAKTILGLMTREQHPDGKVLIIGGGIANFTNVASTFKGIVKALKQFR 185

Query: 349 ---VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
              ++  + + +R  G N   G R++ E G N+
Sbjct: 186 EKLIEFRVSIYVRRGGPNYQEGLRVMRELGGNL 218


>gi|73965859|ref|XP_860955.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 3
           [Canis familiaris]
          Length = 951

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQELRDVSEEDSRE------IEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+       E   E      ++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|309361866|emb|CAP29152.2| hypothetical protein CBG_09435 [Caenorhabditis briggsae AF16]
          Length = 1111

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 67/317 (21%)

Query: 105 CVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA-KDYPQKIFKLLIDPLI 163
           C + ED      E+Y+++  +R   ++ F     GG+DI +V  K     I   L D  +
Sbjct: 116 CAHSED-----EEMYIAIYSERCRDVIMFYE--HGGVDIGDVEEKARAVHIPVQLNDNEM 168

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +T  ++    DML    + +        NLY+A+     + LEINP + + NG++ VLD
Sbjct: 169 TITEREL----DMLLGPCKEKDIIRKFVLNLYEAYKALHFTYLEINPFV-LTNGKIHVLD 223

Query: 224 SKISFDDNALY--------------------------RHLDIQELRDVSEEDSREIEAKQ 257
                D+ A +                          R L ++E + +S+ D++      
Sbjct: 224 LAAKLDETANFLCSDRWSSRSASSRITRSIEFPAPFGRDLTVEE-QYISDMDAK--TGAS 280

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII 315
             L+ +   G +  MV G G ++   D +   GGA   AN+ +  G   + +     K I
Sbjct: 281 LKLTILNRQGRVWTMVAGGGASVVFTDTVCDLGGANELANYGEYSGDPSESQTYEYAKTI 340

Query: 316 TSDSS------------VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVM 357
            S  +            + G + N       FGGI+R     +  +  +KE K++I   +
Sbjct: 341 LSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRA---FETFIDKLKEHKVSI--YV 395

Query: 358 RLEGANVDIGNRLIAES 374
           R  G N   G R + ++
Sbjct: 396 RRGGPNYQEGLRRVKDA 412


>gi|34558814|gb|AAQ75158.1| citrate lyase subunit 1 [Alvinella pompejana epibiont 7G3]
          Length = 447

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 169/440 (38%), Gaps = 75/440 (17%)

Query: 3   IHEYQAKALL--------RKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIH 50
           I EY AK++L         K+N P    +V +     ++A  T P     PL V K  + 
Sbjct: 6   IREYDAKSILARHWDTYFPKFNYPYQTILVETGEQLKKAAETTHPWLKEKPL-VAKPDML 64

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E        D    +     TKQ        +    E 
Sbjct: 65  FGKRGKNGLVLFKVNKPGDVTLE--------DAANWIDEKRATKQKVYFSFDGDTPAGEP 116

Query: 111 GADILRELYLSLLVDRTSGMVAFIAST------------QGGMDIEEVAKDYPQKIFKLL 158
             D L    +      +     +I++T            +GGM++EE      +  FK  
Sbjct: 117 SEDYLTHFIVEPFTPHSQDEEYYISATVVGDDDVLYMSAEGGMEVEENWDKVIEVKFK-- 174

Query: 159 IDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
               I  T +D+          +++ + + +  +     +KA+ + + + LEINP  +M+
Sbjct: 175 ----INETEDDIEKKIRENIPADVKEEDKENFAEFAIGFFKAYRELNFAYLEINPF-VMQ 229

Query: 216 NGRLRVLDSKISFDDNALYRHLDIQ-----------ELRDVSEEDSREIEAKQH---NLS 261
           + ++ +LD     DD A +  +D             E +   E+   E ++K      L+
Sbjct: 230 DNKIELLDMVAKLDDTAGFMMVDHWGKIEFPMPFGMEAKSKEEQAVEEADSKTGASLKLT 289

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGAD--QDKVAAA--FKII 315
            +  +  I  MV G G ++   D I  + G    AN+ +  GG    + K  A     ++
Sbjct: 290 VLKPEARIWTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLM 349

Query: 316 TSDSSVKG---ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           T +   +G   ILI I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 350 TREKDPQGREKILI-IGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 408

Query: 365 DIGNRLIAESGLNVITAIDL 384
           + G R I ++   +   ID+
Sbjct: 409 EKGLRDIRDAANRLGLWIDV 428


>gi|268557936|ref|XP_002636958.1| Hypothetical protein CBG09435 [Caenorhabditis briggsae]
          Length = 1099

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 67/317 (21%)

Query: 105 CVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA-KDYPQKIFKLLIDPLI 163
           C + ED      E+Y+++  +R   ++ F     GG+DI +V  K     I   L D  +
Sbjct: 110 CAHSED-----EEMYIAIYSERCRDVIMFYE--HGGVDIGDVEEKARAVHIPVQLNDNEM 162

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +T  ++    DML    + +        NLY+A+     + LEINP + + NG++ VLD
Sbjct: 163 TITEREL----DMLLGPCKEKDIIRKFVLNLYEAYKALHFTYLEINPFV-LTNGKIHVLD 217

Query: 224 SKISFDDNALY--------------------------RHLDIQELRDVSEEDSREIEAKQ 257
                D+ A +                          R L ++E + +S+ D++      
Sbjct: 218 LAAKLDETANFLCSDRWSSRSASSRITRSIEFPAPFGRDLTVEE-QYISDMDAK--TGAS 274

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII 315
             L+ +   G +  MV G G ++   D +   GGA   AN+ +  G   + +     K I
Sbjct: 275 LKLTILNRQGRVWTMVAGGGASVVFTDTVCDLGGANELANYGEYSGDPSESQTYEYAKTI 334

Query: 316 TSDSS------------VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVM 357
            S  +            + G + N       FGGI+R     +  +  +KE K++I   +
Sbjct: 335 LSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRA---FETFIDKLKEHKVSI--YV 389

Query: 358 RLEGANVDIGNRLIAES 374
           R  G N   G R + ++
Sbjct: 390 RRGGPNYQEGLRRVKDA 406


>gi|73965861|ref|XP_860980.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 4 [Canis
           familiaris]
          Length = 1089

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|319956330|ref|YP_004167593.1| ATP citrate lyase subunit 1 [Nitratifractor salsuginis DSM 16511]
 gi|319418734|gb|ADV45844.1| ATP citrate lyase subunit 1 [Nitratifractor salsuginis DSM 16511]
          Length = 439

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 171/435 (39%), Gaps = 74/435 (17%)

Query: 3   IHEYQAKALLRK--------YNVPVAKGVVISSV-----HAAESAIKTLPGPLYVVKSQI 49
           I EY  K L  K        ++ P  K V+++S       A E   + L     VVK  +
Sbjct: 6   IREYDGKQLFAKHWNEYFDGFHYPF-KSVLVTSADELRQKAKEHGFEWLNQEPLVVKPDM 64

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RGK        +  G V +E + K +  + ++    TL++ Q G    R+    VE
Sbjct: 65  LFGKRGKNDLVLFKKEKPGDVTLEDAAKWI--EEKQSHDVTLLSGQHG----RLTHFIVE 118

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                 ++    +             S +GGM++EE    + +K+ ++ I   I +   D
Sbjct: 119 PFTPHTQDQEYYIAATTVGEDDVLYMSAEGGMEVEE---GWEEKVNEVRIP--INMPEAD 173

Query: 170 V--ASLCDMLE-LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
           +  A   ++ E +  ++           +K F D   + LEINPL+++      +LD   
Sbjct: 174 IEKAIRANVPEDIPAESHEAFATFAIQFFKFFRDMHFAYLEINPLVLIGTD-AHILDLVA 232

Query: 227 SFDDNALY----RHLDIQ------------ELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
             DD A +    +  DI+            E + ++E DS+        L+ +   G I 
Sbjct: 233 RLDDTAGFMMKEKWGDIEFPTAFGMEEQSPEEKAIAEADSK--SGASLKLTVLNPQGRIW 290

Query: 271 CMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGI 324
            MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G 
Sbjct: 291 TMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTGETEFYAETIFDLMTRYPDPRGK 350

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGL 376
           ++ I G I     + K   GI++A+++      + N  + +R  G N         E GL
Sbjct: 351 ILIIGGAIANFTDVAKTFTGIINALEKWAPKLKEHNTKIYVRRGGPNY--------EKGL 402

Query: 377 NVITAIDLDDAAQKI 391
                 D+ DAA+++
Sbjct: 403 Q-----DMKDAAERL 412


>gi|73965875|ref|XP_861179.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 11
           [Canis familiaris]
          Length = 1097

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965873|ref|XP_861149.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 10 [Canis
           familiaris]
          Length = 1087

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965867|ref|XP_861064.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 7
           [Canis familiaris]
          Length = 1103

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|312183635|gb|ADQ42387.1| ATP-citrate lyase subunit B [Methanosaeta harundinacea]
          Length = 425

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 40/289 (13%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCD 175
           ELY+++  +R   ++ F  S +GG+DIE   +   +    +L  P  + + S+  A L D
Sbjct: 119 ELYVAIKSERDKDVIYF--SPRGGVDIEANWESVTEIPVDILARPEELDLGSKLPAGLAD 176

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD-NALY 234
            L     A I G      LY+ + D   + LEINP +   +GR+  LD     DD  A +
Sbjct: 177 RLAPTA-AFIKG------LYRLYRDLGFAYLEINPFVFT-DGRVVPLDLVARLDDAEAFW 228

Query: 235 RH-----LDIQEL--RDVSEEDS--REIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
           +      L+  E   R ++EE++  +EI+++      L+ +   G +  MV G G ++  
Sbjct: 229 QRKAWLGLEFPEPFGRALTEEEAWIKEIDSRTGASLKLTILNPRGRVWTMVAGGGASVIY 288

Query: 283 MDIIKLYG--GAPANFLDVGGGADQDKVAAAFKII------TSDSSVKGILINIFGGIMR 334
            D I   G  G  AN+ +  G    +      K I        D   +   + I GGI  
Sbjct: 289 ADTICDLGFAGELANYGEYSGDPSTEDTYEYTKTILDLMTREEDPEGRPKYLLIGGGIAN 348

Query: 335 -CDV--LVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
             DV    KG++ A+++ K       + + +R  G N + G R++ + G
Sbjct: 349 FTDVAKTFKGVVMALEDYKERLREAGVEIYVRRGGPNYEEGLRIMRKLG 397


>gi|73965879|ref|XP_861238.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 13 [Canis
           familiaris]
          Length = 1094

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965871|ref|XP_861122.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 9 [Canis
           familiaris]
          Length = 1095

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965883|ref|XP_861298.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 15 [Canis
           familiaris]
          Length = 1091

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965865|ref|XP_861037.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 6 [Canis
           familiaris]
          Length = 1088

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQELRDVSEEDSRE------IEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+       E   E      ++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965857|ref|XP_850198.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 2
           [Canis familiaris]
 gi|73965885|ref|XP_861323.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 16
           [Canis familiaris]
 gi|73965887|ref|XP_861351.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 17
           [Canis familiaris]
          Length = 1101

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|74096325|ref|NP_001027756.1| ATP citrate-lyase [Ciona intestinalis]
 gi|9229902|dbj|BAB00624.1| ATP citrate-lyase [Ciona intestinalis]
          Length = 1101

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 28/213 (13%)

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQEL-----RD 244
           +LY+ +     + LEINPL++  +G++ VLD     D  A +   R     E      R+
Sbjct: 187 SLYEFYTSLHFTYLEINPLVV-NDGKIYVLDLAAKLDQCAEFVCARTWGPVEFPPPFGRE 245

Query: 245 VSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFL 297
              E++   +++AK      L+ +  +G I  MV G G ++   D I   GGA   AN+ 
Sbjct: 246 AYPEEAYIADLDAKSGASLKLTILNPNGRIWTMVAGGGASVVYSDTICDLGGASELANYG 305

Query: 298 DVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK 350
           +  G   +    D       ++T      G ++ I GGI          KGI+ A+K+ +
Sbjct: 306 EYSGAPSEQQTYDYARTILSLMTRTPRDDGKVLIIGGGIANFTNVAATFKGIVRALKQFQ 365

Query: 351 IN-----IPLVMRLEGANVDIGNRLIAESGLNV 378
            +     + + +R  G N   G R++ E G ++
Sbjct: 366 ASLRSNKVSIFVRRGGPNYQEGLRVMREVGQHL 398


>gi|73965863|ref|XP_861010.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 5 [Canis
           familiaris]
          Length = 1085

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQELRDVSEEDSRE------IEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+       E   E      ++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|56118260|ref|NP_001008028.1| ATP citrate lyase [Xenopus (Silurana) tropicalis]
 gi|51703371|gb|AAH80908.1| acly protein [Xenopus (Silurana) tropicalis]
          Length = 1091

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +T ++V S   +
Sbjct: 118 EFYVCIYAAREGDYVLF--HHEGGVDVGDVD----SKAQKLLVGVGERLTEKEVKSRLLI 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              Q +  +        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HVAQDKQEVLA-SFITGLFNLYEDLYFTYLEINPLVVTKDG-VYVLDMAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  D++      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPRGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIKDFQCPLKEHEVMIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965869|ref|XP_861090.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 8 [Canis
           familiaris]
          Length = 1089

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965877|ref|XP_861212.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 12
           [Canis familiaris]
          Length = 1111

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73965881|ref|XP_861266.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 14
           [Canis familiaris]
          Length = 1101

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|301773523|ref|XP_002922169.1| PREDICTED: ATP-citrate synthase-like [Ailuropoda melanoleuca]
          Length = 1101

 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFDFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|47204551|emb|CAF96059.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 615

 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 116/290 (40%), Gaps = 35/290 (12%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            E Y+ +   R    V F    +GG+D+ +V  D   K   + +D  I   SED      
Sbjct: 23  EEFYVCIYATREGDYVLF--HHEGGVDVGDV--DAKAKKLLIGVDEKI---SEDTVKKEL 75

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           +  +    +         L+  + D   + LEINPL++ K+G + VLD     D  A Y 
Sbjct: 76  LPLVPNHKKSVLSSFIIGLFNLYEDLFFTYLEINPLVVTKDG-VFVLDMAAKIDATADYI 134

Query: 235 ---RHLDIQELRDVSEEDSRE------IEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
              +  D+        E   E      ++AK      L+ +   G I  MV G G ++  
Sbjct: 135 CKAKWGDVDFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPRGRIWTMVAGGGASVVY 194

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---M 333
            D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I    
Sbjct: 195 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKVLIIGGSIANFT 254

Query: 334 RCDVLVKGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLIAESGLNV 378
                 KGI+ A+K+ ++      + + +R  G N   G R++ E G+ V
Sbjct: 255 NVAATFKGIVRAIKDYQVPLKENEVTIFVRRGGPNYQEGLRVMGEVGVCV 304


>gi|281344523|gb|EFB20107.1| hypothetical protein PANDA_011141 [Ailuropoda melanoleuca]
          Length = 1086

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDKKLNPEDIKKHL-L 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           +   G  +         L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 171 VHAPGDKKEILASFISGLFDFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73293989|gb|AAZ74671.1| ATP citrate lyase beta subunit [Sulfurovum lithotrophicum]
          Length = 311

 Score = 43.9 bits (102), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 20/179 (11%)

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ---------ELR 243
             +K + D + + LEINP++++  G + +LD     DD A +   D            + 
Sbjct: 113 QFFKFYRDMNFAYLEINPIVMLDGGEMAILDLVARLDDTAGFMMKDAWGDIEFPTAFGME 172

Query: 244 DVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAMATMDIIKLYGGAP--ANF 296
           D+S+E+    EA   + + + L      G I  MV G G ++   D I  + G    AN+
Sbjct: 173 DMSDEEKAIAEADSKSGASLKLTILNPMGRIWTMVAGGGASVVYADTIADFAGVEDLANY 232

Query: 297 LDVGGGAD--QDKVAAA--FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
            +  GG    + K  A   F ++T     +G ++ I G I     + K     ++  +I
Sbjct: 233 GEYSGGPTTGETKFYAETIFDLMTRYDDPRGKVLIIGGAIANFTDVAKTFTGIIQAFEI 291


>gi|50540366|ref|NP_001002649.1| ATP-citrate synthase [Danio rerio]
 gi|49904342|gb|AAH76484.1| ATP citrate lyase [Danio rerio]
          Length = 1092

 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 43/290 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    + F    +GG+D+ +V      K  KLL+     ++++ V S    
Sbjct: 118 EFYVCIYATREGDYMLF--HHEGGVDVGDVD----SKALKLLVGVDEKISADTVKS---- 167

Query: 177 LELQGQARIDGGDLFPN----LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
            +L   A  D  ++  +    L+  + D   + LEINPL++ K+G + VLD     D  A
Sbjct: 168 -QLLTHAPADKKEILSSFLVGLFNLYEDLYFTYLEINPLVVTKDG-VYVLDMAAKIDATA 225

Query: 233 LY----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            Y    +  D++      R+   E++   +++AK      L+ +   G I  MV G G +
Sbjct: 226 DYLCKAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPRGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI- 332
           +   D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKVLIIGGSIA 345

Query: 333 --MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A K+ +       + + +R  G N   G R++ E G
Sbjct: 346 NFTNVAATFKGIVRAFKDYQDPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|195029649|ref|XP_001987684.1| GH19829 [Drosophila grimshawi]
 gi|193903684|gb|EDW02551.1| GH19829 [Drosophila grimshawi]
          Length = 1100

 Score = 43.5 bits (101), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 35/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y+ +   R++  + F     GG+DI +V  D       + +D  + +       L  +
Sbjct: 118 EMYVCIYSHRSADTILFYH--LGGVDIGDV--DAKAVKLDVPVDSELSLADVKTTLLKAI 173

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---- 232
            +   + RI   +    LY  F +   + LEINPL++  +  L +LD     D  A    
Sbjct: 174 TDESKKERI--ANFIYALYATFAELYFTYLEINPLVVTAD-NLYILDLAAKLDSTADFIC 230

Query: 233 --LYRHLDIQEL--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
              +  +D      RD   E++   +++AK      L+ +  +G I  MV G G ++   
Sbjct: 231 RPNWGEIDYPPPFGRDAFPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 290

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGIMRCD 336
           D I   GGA   AN+ +  G   + +     K I     +S     G ++   GGI    
Sbjct: 291 DTICDLGGATELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIANFT 350

Query: 337 VL---VKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
            +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 351 NVASTFQGIITALREFQSKLVEHNVSIFVRRAGPNYQEGLRRMRDFG 397


>gi|213416643|ref|ZP_03349787.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 73

 Score = 43.5 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 10/80 (12%)

Query: 14 KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
          +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK           GGV+V 
Sbjct: 3  RYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA----------GGVKVV 52

Query: 74 SSLKSVISDIREILGSTLIT 93
           S + + +     LG  L+T
Sbjct: 53 KSKEEIRAFAENWLGKRLVT 72


>gi|148222521|ref|NP_001088255.1| ATP citrate lyase [Xenopus laevis]
 gi|54038148|gb|AAH84253.1| LOC495086 protein [Xenopus laevis]
          Length = 1091

 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +T + V S   +
Sbjct: 118 EFYVCIYAAREGDYVLF--HHEGGVDVGDVD----SKAQKLLVGVGERLTEQQVKSHLLI 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              Q    +        L+  + D   + LEINPL++ +NG + VLD     D  A Y  
Sbjct: 172 HVAQDNKEVLA-SFITGLFHLYEDLYFTYLEINPLVVTQNG-VYVLDMAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  D+       R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KAKWGDVDFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPRGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +  + G ++ I G I     
Sbjct: 290 DTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLMTREKHLDGKVLIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIKDFQGPLKEHEVMIFVRRGGPNYQEGLRVMGEVG 395


>gi|74193875|dbj|BAE36874.1| unnamed protein product [Mus musculus]
 gi|123231522|emb|CAM27798.1| ATP citrate lyase [Mus musculus]
          Length = 491

 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     
Sbjct: 117 EEFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNTEDIKRHLL 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           +   + +  +        L+  + D   + LEINPL++ K+G + +LD     D  A Y 
Sbjct: 171 VHAPEDKKEVLA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYI 228

Query: 235 ---RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
              +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++  
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVY 288

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---M 333
            D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I    
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFT 348

Query: 334 RCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                 KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|218677510|ref|ZP_03525407.1| succinyl-CoA synthetase subunit beta [Rhizobium etli CIAT 894]
          Length = 26

 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 21/25 (84%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVI 25
          MNIHEYQAKALL+ Y  PVA+GV I
Sbjct: 1  MNIHEYQAKALLKGYGAPVAEGVAI 25


>gi|149723798|ref|XP_001495696.1| PREDICTED: ATP citrate lyase isoform 1 [Equus caballus]
          Length = 1101

 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     ++ ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLSPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|149723800|ref|XP_001495733.1| PREDICTED: ATP citrate lyase isoform 2 [Equus caballus]
          Length = 1091

 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     ++ ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLSPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|73293887|gb|AAZ74669.1| ATP citrate lyase beta subunit [Thioreductor micantisoli BKB25Ts-Y]
          Length = 299

 Score = 43.1 bits (100), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 27/179 (15%)

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           YK + D + + LEINP++++ N ++ +LD     DD A +   D  +  D+    +  +E
Sbjct: 103 YKFYRDLNFAYLEINPIVMLDNNKMAILDLVARLDDTAGFLMAD--KWGDIEYPTAFGME 160

Query: 255 AKQHNLSYIALD----------------GNIGCMVNGAGLAMATMDIIKLYGGAP--ANF 296
            K      IAL                 G I  MV G G ++   D I  + G    AN+
Sbjct: 161 DKSPEEEAIALADSKSGASLKLTILNPMGRIWTMVAGGGASVVYADTIADFAGVKDLANY 220

Query: 297 LDVGGG---ADQDKVA-AAFKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAVKE 348
            +  GG   A+ +  A   F ++T     +G ++ I G I     + K   GI++A ++
Sbjct: 221 GEYSGGPTTAETEFYADTIFDLMTRHQDPRGKILIIGGAIANFTDIAKTFTGIINAFEK 279


>gi|313227556|emb|CBY22703.1| unnamed protein product [Oikopleura dioica]
          Length = 899

 Score = 43.1 bits (100), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQEL-----RDV 245
           L+  +     + +EINP I++++G++ +LD     D  A Y   R            RD 
Sbjct: 188 LFAVYRKLYFAYMEINP-IVVRDGKIYILDLAAKLDQCAEYICSREWGSLTFPPPFGRDA 246

Query: 246 SEEDSR--EIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E+    E++AK  +   L+ +   GNI  MV G G ++   D I   GG    AN+ +
Sbjct: 247 FPEEKYIAELDAKSGSSMKLTIMNPKGNIWTMVAGGGASVIYSDTICELGGTSELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVKI 351
             G   +    D       ++T     +G  + I GGI          KGI+ A+KE ++
Sbjct: 307 YSGAPSEQQTYDYARTILSLLTRYPHPEGKKLIIGGGIANFTNVAATFKGIVRALKEYQM 366

Query: 352 NI-----PLVMRLEGANVDIGNRLIAESG 375
            +      + +R  G N   G R++ E G
Sbjct: 367 QLQEHKTQIFVRRGGPNYQEGLRIMKELG 395


>gi|71896389|ref|NP_001025711.1| ATP-citrate synthase [Gallus gallus]
 gi|60098703|emb|CAH65182.1| hypothetical protein RCJMB04_6f14 [Gallus gallus]
          Length = 1101

 Score = 43.1 bits (100), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 43/290 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +   DV      
Sbjct: 118 EFYVCIYAAREGDYVLFYH--EGGVDVGDVD----AKAQKLLVAVDEKLNESDVKK---- 167

Query: 177 LELQGQARIDGGDLFPN----LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L   A  D  D+  +    L+  + D   + LEINPL++ K+G + +LD     D  A
Sbjct: 168 -HLLQHAPADKKDILASFICGLFNLYEDLYFTYLEINPLVVTKDG-VYILDLAAKIDATA 225

Query: 233 LY----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            Y    +  D++      R+   E++   +++AK      L+ +   G I  MV G G +
Sbjct: 226 DYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI- 332
           +   D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIA 345

Query: 333 --MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 346 NFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEGLRVMGEVG 395


>gi|298508701|pdb|3MWE|A Chain A, Truncated Human Atp-Citrate Lyase With Tartrate Bound
          Length = 425

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 35/287 (12%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     
Sbjct: 117 EEFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNPEDIKKHLL 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           +   + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y 
Sbjct: 171 VHAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYI 228

Query: 235 ---RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
              +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++  
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVY 288

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---M 333
            D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I    
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFT 348

Query: 334 RCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                 KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|148222492|ref|NP_001088452.1| hypothetical protein LOC495316 [Xenopus laevis]
 gi|54311201|gb|AAH84776.1| LOC495316 protein [Xenopus laevis]
          Length = 1101

 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +T + V S   +
Sbjct: 118 EYYVCIYAAREGDYVLF--HHEGGVDVGDVD----SKAQKLLVGVGERLTEQQVKSQLLI 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              Q +  +        L+  + D   + LEINPL++ +NG + VLD     D  A Y  
Sbjct: 172 HVAQDKKEVLS-SFITGLFNLYEDLYFTYLEINPLVVTQNG-VYVLDMAAKIDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  D++      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPRGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLMTREKHSDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIKDSQGPLKEHEVMIFVRRGGPNYQEGLRVMGEVG 395


>gi|313151222|ref|NP_001186225.1| ATP-citrate synthase isoform 1 [Mus musculus]
 gi|74210124|dbj|BAE21336.1| unnamed protein product [Mus musculus]
 gi|123231524|emb|CAM27800.1| ATP citrate lyase [Mus musculus]
 gi|123236002|emb|CAM23024.1| ATP citrate lyase [Mus musculus]
          Length = 1101

 Score = 43.1 bits (100), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNTEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  +        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEVLA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|319789997|ref|YP_004151630.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage
           enzyme) [Thermovibrio ammonificans HB-1]
 gi|317114499|gb|ADU96989.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage
           enzyme) [Thermovibrio ammonificans HB-1]
          Length = 433

 Score = 43.1 bits (100), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 43/265 (16%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD---MLELQGQARIDGGDLFP 192
           S  GG+D+EE       K+ +++I PL   T E++  L +     E++ + +    D   
Sbjct: 143 SAFGGIDVEENW----DKVREIVIPPL--ATEEEIDRLIEENVPEEIKDKEKY--ADFVK 194

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELR-----D 244
            LY+ F D   + LEINPL+++ N ++  LD     DD A +   R     E       +
Sbjct: 195 RLYRFFRDMHFAYLEINPLVMVGN-KVYPLDFVGRVDDTAQFLVGRKWGELEFPAGFGGE 253

Query: 245 VSEEDS--REIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFL 297
           +S E+   +E++ K      L+ +  +G I  +V G G ++   D +   G     AN+ 
Sbjct: 254 LSPEEKYIKEMDEKSGASLKLTILNPEGRIWTLVAGGGASVVYADTVADLGYVKELANYG 313

Query: 298 DVGGGAD----QDKVAAAFKIITSDSSVKG---ILINIFGGIMRCDVLVK---GILSAVK 347
           +  G       ++ V     ++T     +G   ILI I G I     + K   GI+ A K
Sbjct: 314 EYSGNPSRAETREYVKTVLDLMTRHKDPQGRPKILI-IGGAIANFTDVAKTFDGIIDAFK 372

Query: 348 EV-----KINIPLVMRLEGANVDIG 367
           E      ++ + + +R  G N ++G
Sbjct: 373 EYADKMKEVGVKIYVRRGGPNYEVG 397


>gi|297701138|ref|XP_002827587.1| PREDICTED: ATP-citrate synthase-like [Pongo abelii]
          Length = 1058

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----TKAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|71680955|gb|AAI00619.1| Acly protein [Rattus norvegicus]
          Length = 1091

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 35/288 (12%)

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           + E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+    
Sbjct: 116 VEEFYVCIYATREGDYVLF--HHEGGVDVGDVD----TKAQKLLVGVDEKLNAEDIKRHL 169

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            +   + +  I        L+  + D   + LEINPL++ K+G + +LD     D  A Y
Sbjct: 170 LVHAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADY 227

Query: 235 ----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
               +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++ 
Sbjct: 228 ICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVV 287

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI--- 332
             D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I   
Sbjct: 288 YSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANF 347

Query: 333 MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                  KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 348 TNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|29293809|ref|NP_598798.1| ATP-citrate synthase isoform 2 [Mus musculus]
 gi|21263374|sp|Q91V92|ACLY_MOUSE RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|14193670|gb|AAK56080.1|AF332051_1 ATP citrate lyase [Mus musculus]
 gi|14193672|gb|AAK56081.1|AF332052_1 ATP citrate lyase [Mus musculus]
 gi|38614162|gb|AAH56378.1| ATP citrate lyase [Mus musculus]
 gi|123231523|emb|CAM27799.1| ATP citrate lyase [Mus musculus]
 gi|123236003|emb|CAM23025.1| ATP citrate lyase [Mus musculus]
 gi|148670609|gb|EDL02556.1| ATP citrate lyase, isoform CRA_b [Mus musculus]
          Length = 1091

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNTEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  +        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEVLA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|268325585|emb|CBH39173.1| conserved hypothetical protein containing ATP-grasp domain
           [uncultured archaeon]
          Length = 425

 Score = 42.7 bits (99), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 171/433 (39%), Gaps = 80/433 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGV--------VISSVHAAESAIKTLPG----PLYVVKSQIH 50
           I EY AK +L K+   ++KG         +++   + E+A K  P      L V   Q+ 
Sbjct: 6   IREYDAKRILAKHMRRLSKGTFKYRGRVALVTPDTSIEAAAKKKPWVKTEKLTVKPDQLF 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK           G + V ++     S + E + S +   + G    ++    V+ 
Sbjct: 66  -GKRGK----------HGLLLVNATYDEAKSWLEEKMNSIV---EVGKVQGKLTHFLVQP 111

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE-----VAKDYP--QKIFKLLIDPLI 163
             ++ +E YL+    +      F  S +GG+DIE         + P   KI  + I P++
Sbjct: 112 YVELDKEYYLAFAGHQEGDYAHF--SAEGGVDIEANWDMVTTVNVPIDAKIEDVDISPIL 169

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
              S D              R    DL   L++ +       LE NP    KNG    +D
Sbjct: 170 DRVSND-------------DRDAFRDLITALFRFYRKLQFGFLEFNPF-THKNGEFFPVD 215

Query: 224 SKISFDDNALYR-HLDIQEL-------RDVSEEDS--REIEAKQHN---LSYIALDGNIG 270
           +    DD A +  H D +++       R++  E+    E++ K  +   L+ +   G + 
Sbjct: 216 TVARLDDTAHFLCHEDWKDVEFPAPFGRELRPEEQYIEELDEKSGSSLKLTILNPKGRVW 275

Query: 271 CMVNGAGLAMATMD-IIKL-YGGAPANFLDVGGGADQ----DKVAAAFKIITSDSSVKGI 324
            MV G G ++   D ++ L +G   A + +  G        D       ++T +    G 
Sbjct: 276 TMVAGGGASVIYADTVVDLGFGDELATYGEYSGNPTTEETYDYAKTLLDLMTREKVEGGK 335

Query: 325 LINIFGGI-------MRCDVLVKGILSAVKEVK-INIPLVMRLEGANVDIGNRLIAESGL 376
           ++ I GGI       M  D +++ +    +++K  +I + +R  G N   G   I E+G 
Sbjct: 336 VLIIGGGIANFTDVAMTFDGIIQALDDYAEQIKEQDIKIFIRRGGPNYKAGLAKIREAG- 394

Query: 377 NVITAIDLDDAAQ 389
                +DLD A  
Sbjct: 395 ---KRLDLDMAVH 404


>gi|82697335|ref|NP_001032534.1| ATP-citrate synthase [Bos taurus]
 gi|121957975|sp|Q32PF2|ACLY_BOVIN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|79158721|gb|AAI08139.1| ATP citrate lyase [Bos taurus]
 gi|296476337|gb|DAA18452.1| ATP citrate lyase [Bos taurus]
          Length = 1091

 Score = 42.7 bits (99), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|326934168|ref|XP_003213166.1| PREDICTED: ATP-citrate synthase-like isoform 2 [Meleagris
           gallopavo]
          Length = 1101

 Score = 42.7 bits (99), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 43/290 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +   DV      
Sbjct: 118 EFYVCIYAAREGDCVLFYH--EGGVDVGDVD----AKAQKLLVAVDEKLNESDVKK---- 167

Query: 177 LELQGQARIDGGDLFPN----LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L   A  D  D+  +    L+  + D   + LEINPL++ K+G + +LD     D  A
Sbjct: 168 -HLLQHAPADKKDILASFICGLFNLYEDLYFTYLEINPLVVTKDG-VYILDLAAKIDATA 225

Query: 233 LY----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            Y    +  D++      R+   E++   +++AK      L+ +   G I  MV G G +
Sbjct: 226 DYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI- 332
           +   D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIA 345

Query: 333 --MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 346 NFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEGLRVMGEVG 395


>gi|332260732|ref|XP_003279435.1| PREDICTED: ATP-citrate synthase [Nomascus leucogenys]
          Length = 1095

 Score = 42.7 bits (99), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|326934166|ref|XP_003213165.1| PREDICTED: ATP-citrate synthase-like isoform 1 [Meleagris
           gallopavo]
          Length = 1091

 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 43/290 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +   DV      
Sbjct: 118 EFYVCIYAAREGDCVLFYH--EGGVDVGDVD----AKAQKLLVAVDEKLNESDVKK---- 167

Query: 177 LELQGQARIDGGDLFPN----LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L   A  D  D+  +    L+  + D   + LEINPL++ K+G + +LD     D  A
Sbjct: 168 -HLLQHAPADKKDILASFICGLFNLYEDLYFTYLEINPLVVTKDG-VYILDLAAKIDATA 225

Query: 233 LY----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            Y    +  D++      R+   E++   +++AK      L+ +   G I  MV G G +
Sbjct: 226 DYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI- 332
           +   D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIA 345

Query: 333 --MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 346 NFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEGLRVMGEVG 395


>gi|148670608|gb|EDL02555.1| ATP citrate lyase, isoform CRA_a [Mus musculus]
          Length = 1102

 Score = 42.7 bits (99), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNTEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  +        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEVLA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|68533125|dbj|BAE06117.1| ACLY variant protein [Homo sapiens]
          Length = 1137

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 154 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNPEDIKKHLLV 207

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 208 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 265

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 266 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 325

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 326 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 385

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 386 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 431


>gi|38569423|ref|NP_942127.1| ATP-citrate synthase isoform 2 [Homo sapiens]
 gi|119581181|gb|EAW60777.1| ATP citrate lyase, isoform CRA_a [Homo sapiens]
 gi|119581182|gb|EAW60778.1| ATP citrate lyase, isoform CRA_a [Homo sapiens]
          Length = 1091

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|326497339|dbj|BAK02254.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1102

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 24/215 (11%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   RT   + F    +GG+D+ +V      K  +LL+  +   + ED+++   +
Sbjct: 117 EYYICINSQRTGDEILFYH--EGGVDVGDVD----AKALRLLVPIMSSPSIEDIST--KL 168

Query: 177 LELQGQARIDGGDLF-PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           L    +AR+    LF   L++ +     + LEINPL+++ +  +  LD     D+ A + 
Sbjct: 169 LAQVPKARVARLALFISKLFEMYAKLHFAYLEINPLVMLDDLSVIPLDLAAKLDETAKFE 228

Query: 235 --RHLDIQEL-----RDVSEEDS--REIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
             +H    E      R  S E++  +E+++       L+ +  +G I  M+ G G ++  
Sbjct: 229 CSKHWGSIEFPAAFGRPPSPEEAYIQELDSSTGASLKLTVLNPNGRIWTMIAGGGASVIY 288

Query: 283 MD-IIKLYGGAP-ANFLDVGGGADQDKVAAAFKII 315
            D I+ L GGA  AN+ +  G   +       K I
Sbjct: 289 ADTIVDLGGGAELANYGEYSGAPSESATYEYAKTI 323


>gi|332847769|ref|XP_511495.3| PREDICTED: ATP-citrate synthase [Pan troglodytes]
          Length = 1041

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----TKAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|161760632|ref|NP_001104565.1| ATP-citrate synthase isoform 2 [Rattus norvegicus]
 gi|149054226|gb|EDM06043.1| ATP citrate lyase, isoform CRA_b [Rattus norvegicus]
          Length = 1091

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----TKAQKLLVGVDEKLNAEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|162287306|ref|NP_058683.2| ATP-citrate synthase isoform 1 [Rattus norvegicus]
 gi|149054225|gb|EDM06042.1| ATP citrate lyase, isoform CRA_a [Rattus norvegicus]
          Length = 1101

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----TKAQKLLVGVDEKLNAEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|17557344|ref|NP_506267.1| hypothetical protein B0365.1 [Caenorhabditis elegans]
 gi|3873757|emb|CAB02690.1| C. elegans protein B0365.1, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 1099

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 126/316 (39%), Gaps = 65/316 (20%)

Query: 105 CVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI---EEVAKDYPQKIFKLLIDP 161
           C + E+      E+Y+++  +R   ++ F    QGG+DI   EE A+     +   L D 
Sbjct: 110 CAHTEN-----EEMYIAIYSERCRDVIMFYE--QGGVDIGDVEEKARSVHVPV--QLDDN 160

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
            + ++  ++  L      +   R        +LY+A+     + LEINP  ++ NG++ +
Sbjct: 161 AMSISERELGVLLGPCSDKDDIR----KFVRSLYEAYKALHFTYLEINPF-VLTNGKIHI 215

Query: 222 LDSKISFDDNALYRHLDIQELRDVS--------------------EEDSREIEAKQH--- 258
           LD     D+ A +   D    R+ S                    E+   +++AK     
Sbjct: 216 LDLAAKLDETASFLCSDKWSGRNASARIAPTLEFPAPFGRDLTSEEQYISDMDAKTGASL 275

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT 316
            L+ +   G +  MV G G ++   D +   GG+   AN+ +  G   + +     K I 
Sbjct: 276 KLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGSSELANYGEYSGDPSEAQTYEYAKTIL 335

Query: 317 SDSS------------VKGILINI------FGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           S  +            + G + N       FGGI+R     +  +  +KE   N+ + +R
Sbjct: 336 SVMTEGAPRPDGKVLIIGGSIANFTNVAKTFGGIVRA---FETFIDKLKEH--NVSIYVR 390

Query: 359 LEGANVDIGNRLIAES 374
             G N   G R + ++
Sbjct: 391 RGGPNYQEGLRRVKDA 406


>gi|38569421|ref|NP_001087.2| ATP-citrate synthase isoform 1 [Homo sapiens]
 gi|116241237|sp|P53396|ACLY_HUMAN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; Short=ACL; AltName: Full=Citrate
           cleavage enzyme
 gi|13623199|gb|AAH06195.1| ATP citrate lyase [Homo sapiens]
 gi|119581183|gb|EAW60779.1| ATP citrate lyase, isoform CRA_b [Homo sapiens]
 gi|119581185|gb|EAW60781.1| ATP citrate lyase, isoform CRA_b [Homo sapiens]
 gi|168270894|dbj|BAG10240.1| ATP-citrate synthase [synthetic construct]
 gi|325463509|gb|ADZ15525.1| ATP citrate lyase [synthetic construct]
          Length = 1101

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|113116|sp|P16638|ACLY_RAT RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|203490|gb|AAA74463.1| ATP citrate-lyase [Rattus norvegicus]
          Length = 1100

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----TKAQKLLVGVDEKLNAEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|297273034|ref|XP_001108114.2| PREDICTED: ATP-citrate synthase isoform 2 [Macaca mulatta]
          Length = 1011

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTVFVRRGGPNYQEGLRVMGEVG 395


>gi|84490419|ref|NP_001033711.1| ATP-citrate synthase [Ovis aries]
 gi|121957977|sp|Q2TCH3|ACLY_SHEEP RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|63364938|gb|AAY40742.1| ATP-citrate lyase [Ovis aries]
          Length = 1101

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVAVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|302566700|gb|ADL41159.1| ATP-citrate lyase [Anser anser anser]
          Length = 1091

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 37/287 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     ++  DV     +
Sbjct: 118 EFYVCIYAAREGDYVLF--HHEGGVDVGDVD----AKAQKLLVAVDEKLSESDVKK--QL 169

Query: 177 LELQGQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           L+     + D        L+  + D   + LEINPL++ K+G + +LD     D  A Y 
Sbjct: 170 LQYAPANKKDVLASFICGLFNLYEDLYFTYLEINPLVVTKDG-VYILDLAAKIDATADYI 228

Query: 235 ---RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
              +  D++      R+   E++   +++AK      L+ +   G I  MV G G ++  
Sbjct: 229 CKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGASVVY 288

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---M 333
            D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I    
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFT 348

Query: 334 RCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                 KGI+ A+K+ +       + + +R  G N   G R++ E G
Sbjct: 349 NVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEGLRVMGEVG 395


>gi|311267217|ref|XP_003131469.1| PREDICTED: ATP-citrate synthase-like [Sus scrofa]
          Length = 718

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ K+G + VLD     D  A Y    +  DI+      R+ 
Sbjct: 188 LFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   +    D       ++T +   +G ++ I G I          KGI+ A+++ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQG 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|194380758|dbj|BAG58532.1| unnamed protein product [Homo sapiens]
          Length = 1145

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 113/286 (39%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 172 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNPEDIKKHLLV 225

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
                +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 226 HAPDDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 283

Query: 235 --RHLDIQELRDVSEEDSRE------IEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+       E   E      ++AK      L+ +   G I  MV G G ++   
Sbjct: 284 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 343

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 344 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 403

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 404 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 449


>gi|603074|gb|AAB60340.1| ATP:citrate lyase [Homo sapiens]
          Length = 1101

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 43/290 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+      
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNPEDIKK---- 167

Query: 177 LELQGQARIDGGDLFPN----LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L   A  D  ++  +    L+  + D   + LEINPL++ K+G + VLD     D  A
Sbjct: 168 -HLLVHAPDDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATA 225

Query: 233 LY----RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            Y    +  DI+      R+   E++   +++AK      L+ +   G I  MV G G +
Sbjct: 226 DYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI- 332
           +   D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIA 345

Query: 333 --MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 346 NFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|242014064|ref|XP_002427718.1| ATP-citrate synthase, putative [Pediculus humanus corporis]
 gi|212512153|gb|EEB14980.1| ATP-citrate synthase, putative [Pediculus humanus corporis]
          Length = 1093

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 28/218 (12%)

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA------LYRHLDIQE 241
            +   +LYK + D   + LEINPL++  N  + VLD     D  A      L+  +D   
Sbjct: 179 AEFIQSLYKVYVDLYFTYLEINPLVVT-NESVYVLDMAAKVDATADFMCRTLWGEIDFPP 237

Query: 242 L--RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP- 293
              RD   E++   ++++K      L+ +   G I  MV G G ++   D +    G   
Sbjct: 238 PFGRDAYPEEAYIADLDSKSGASLKLTILNKKGRIWMMVAGGGASVIYADTLCDLCGVNE 297

Query: 294 -ANFLDVGGGADQDKVAAAFKIITS-------DSSVKGILINIFGGIMRCDVLVKGILSA 345
            AN+ +  G   + +     K I S             I+              KGI++A
Sbjct: 298 LANYGEYSGAPSEQQTYEYAKTILSLMTQEPHPDGKILIIGGGIANFTNVAATFKGIVTA 357

Query: 346 VKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           ++E     V++N+ + +R  G N   G R + E G N+
Sbjct: 358 LQEYQPRLVEMNVSIFVRRAGPNYQEGLRRMREVGQNL 395


>gi|296202905|ref|XP_002748671.1| PREDICTED: ATP-citrate synthase [Callithrix jacchus]
          Length = 1091

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNPEDIKKHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y  
Sbjct: 172 HAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI       R+   E++   +++AK      L+ +   G I  MV G G ++   
Sbjct: 230 KVKWGDIDFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|74146613|dbj|BAE41315.1| unnamed protein product [Mus musculus]
          Length = 1091

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ K+G + +LD     D  A Y    +  DI+      R+ 
Sbjct: 188 LFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   +    D       ++T +   +G ++ I G I          KGI+ A+++ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQG 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|317419433|emb|CBN81470.1| ATP-citrate synthase [Dicentrarchus labrax]
          Length = 1092

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ ++G + VLD     D  A Y    +  D++      R+ 
Sbjct: 188 LFNLYEDLYFTYLEINPLVVTQDG-VYVLDMAAKIDATADYICKAKWGDVEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPRGRIWTMVAGGGASVVYSDTICDLGGVDELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   +    D       ++T +   +G ++ I G I          KGI+ A+K+ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHSQGKVLIIGGSIANFTNVAATFKGIVRAIKDYQG 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|188996978|ref|YP_001931229.1| ATP citrate synthase, subunit 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932045|gb|ACD66675.1| ATP citrate synthase, subunit 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 435

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 37/269 (13%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LELQGQARIDGGDLFPNL 194
           S  GG+D+EE       K+ ++ I P    + E++  L    +  + + R   GD     
Sbjct: 143 SAFGGIDVEENW----DKVVEVHIPPT--ASDEEIEKLIKANVPKEIKDREKYGDFVVRA 196

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQEL-----RDVS 246
           YK F D      EINPL+++ N  + +LD     DD A +   +     E      RD++
Sbjct: 197 YKMFRDLHFVYFEINPLVMVDNN-VYLLDFVGKVDDTAGFVVGKKWGELEFPSGFGRDLT 255

Query: 247 EEDS--REIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDV 299
            E+   +E++ K  +   L+ +  +G I  +V G G ++   D +   G     AN+ + 
Sbjct: 256 PEEKYIKELDEKSGSSLKLTILNPEGRIWTLVAGGGASVVYADTVADMGYVNDLANYGEY 315

Query: 300 GGGADQDKVAAAFKII------TSDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV- 349
            G   + +     K +      +   S K  ++ I G I     + K   GI+ A KE  
Sbjct: 316 SGNPTRTETREYVKTVLDLMTRSKHPSGKPKILLIGGAIANFTDVAKTFDGIIDAFKEYA 375

Query: 350 ----KINIPLVMRLEGANVDIGNRLIAES 374
               ++ + + +R  G N ++G + I ++
Sbjct: 376 DKMRQVGVRIYVRRGGPNYEVGLKRIKQA 404


>gi|126307954|ref|XP_001364183.1| PREDICTED: similar to ATP citrate lyase isoform 1 [Monodelphis
           domestica]
          Length = 1101

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ K+G + +LD     D  A Y    +  D++      R+ 
Sbjct: 188 LFHLYEDLYFTYLEINPLVVTKDG-VYILDLAAKIDATADYICKVKWGDLEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVDELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   +    D       ++T +   +G ++ I G I          KGI+ A+++ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPQGKILIIGGSIANFTNVAATFKGIVRAIRDYQG 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|126307956|ref|XP_001364262.1| PREDICTED: similar to ATP citrate lyase isoform 2 [Monodelphis
           domestica]
          Length = 1091

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ K+G + +LD     D  A Y    +  D++      R+ 
Sbjct: 188 LFHLYEDLYFTYLEINPLVVTKDG-VYILDLAAKIDATADYICKVKWGDLEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVDELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   +    D       ++T +   +G ++ I G I          KGI+ A+++ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPQGKILIIGGSIANFTNVAATFKGIVRAIRDYQG 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|157427728|ref|NP_001098772.1| ATP citrate lyase [Sus scrofa]
 gi|156140098|gb|ABU51323.1| ATP citrate lyase [Sus scrofa]
          Length = 1076

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ K+G + VLD     D  A Y    +  DI+      R+ 
Sbjct: 188 LFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVKI 351
             G   +    D       ++T +   +G ++ I G I          KGI+ A+++ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQG 366

Query: 352 NI-----PLVMRLEGANVDIGNRLIAESG 375
            +      + +R  G N   G R++ E G
Sbjct: 367 PLKEHEATIFVRRGGPNYQEGLRVMGEVG 395


>gi|313681794|ref|YP_004059532.1| ATP citrate lyase subunit 1 [Sulfuricurvum kujiense DSM 16994]
 gi|313154654|gb|ADR33332.1| ATP citrate lyase subunit 1 [Sulfuricurvum kujiense DSM 16994]
          Length = 438

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 130/331 (39%), Gaps = 49/331 (14%)

Query: 3   IHEYQAKALLRKY-------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQI 49
           I EY  KA+  K+             +V V  G  + +  A +   + L     V K  +
Sbjct: 6   IREYDGKAIFSKHWEKYFSGFHYGFKSVLVTNGDELRAC-AQKHGFEWLKQEALVAKPDM 64

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RGK        +  G V +E + K +   I     +TL++ Q G     +   +  
Sbjct: 65  LFGKRGKNDLVLFKTNKPGDVTLEDAAKWIDEKISH--ETTLLSGQHGTLTHFIIEPFTP 122

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
              D  +E Y+S        ++    S +GGM++EE    + +K+ ++ I P+    + D
Sbjct: 123 HSQD--QEYYISATTVGEDDVLYL--SAEGGMEVEE---GWEEKVNEVTI-PI----TMD 170

Query: 170 VASLCDMLELQGQARIDGGD------LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            A++  ++     A I   +           YK + D + + LEINP++++ N  + +LD
Sbjct: 171 DANIAHLIRANVPAGIPAENKERFITFAEQFYKFYRDLNFAYLEINPIVMIGN-DMHILD 229

Query: 224 SKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIALD-----GNI 269
                DD A +   +            + D S E+    EA   + + + L      G I
Sbjct: 230 LVARLDDTAGFMMGESWCGAEFPTAFGMEDQSPEEKAIAEADSKSGASLKLTILNPMGRI 289

Query: 270 GCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             MV G G ++   D I    G  A+  + G
Sbjct: 290 WTMVAGGGASVVYADTIADLSGNVADLANYG 320


>gi|292619409|ref|XP_001334195.3| PREDICTED: hypothetical protein LOC794259 [Danio rerio]
          Length = 2571

 Score = 39.7 bits (91), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++ K+G + VLD     D  A Y    +  D++      R+ 
Sbjct: 188 LFNLYEDLYFTYLEINPLVVTKDG-VYVLDMAAKIDSAAEYICKPKWGDVEFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   ++++K      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDSKSGASLKLTVLNPSGRIWTMVAGGGASVVYSDTICDLGGVDELANYGE 306

Query: 299 VGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   + ++    K I    T +    G ++ I G I          KGI+ A+K+ + 
Sbjct: 307 YSGSPSEQQMYDYAKTILLLMTREKHSDGKVLIIGGSIANFTNVAATFKGIVRAIKDYQE 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|28935|emb|CAA45614.1| ATP-citrate (pro-S-)-lyase [Homo sapiens]
          Length = 1105

 Score = 39.7 bits (91), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 117/290 (40%), Gaps = 43/290 (14%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+      
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KAQKLLVGVDEKLNPEDIKK---- 167

Query: 177 LELQGQARIDGGDLFPN----LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L   A  D  ++  +    L+  + D   + LEINPL++ K+G + VLD     D  A
Sbjct: 168 -HLLVHAPDDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATA 225

Query: 233 LY----RHLDIQ------ELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            Y    +  DI+       +    E    +++AK      L+ +   G I  MV G G +
Sbjct: 226 DYICKVKWGDIEFPPPFGRVAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI- 332
           +   D I   GG    AN+ +  G   +    D       ++T +    G ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIA 345

Query: 333 --MRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                    KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 346 NFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|298508699|pdb|3MWD|A Chain A, Truncated Human Atp-Citrate Lyase With Citrate Bound
          Length = 425

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 35/287 (12%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            E Y+ +   R    V F    +GG+D+ +V      K  KLL+     +  ED+     
Sbjct: 117 EEFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNPEDIKKHLL 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           +   + +  I        L+  + D   + LEINPL++ K+G + VLD     D  A Y 
Sbjct: 171 VHAPEDKKEILA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYI 228

Query: 235 ---RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
              +  DI+      R+   E++   +++AK      L+ +   G I   V G G ++  
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTXVAGGGASVVY 288

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI---M 333
            D I   GG    AN+ +  G   + +     K I    T +    G ++ I G I    
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLXTREKHPDGKILIIGGSIANFT 348

Query: 334 RCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                 KGI+ A+++ +       + + +R  G N   G R+  E G
Sbjct: 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVXGEVG 395


>gi|327275431|ref|XP_003222477.1| PREDICTED: LOW QUALITY PROTEIN: ATP-citrate synthase-like [Anolis
           carolinensis]
          Length = 1101

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 28/209 (13%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RDV 245
           L+  + D   + LEINPL++  NG + VLD     D  A Y    +  D+       R+ 
Sbjct: 188 LFNLYEDLYFTYLEINPLVVTVNG-VYVLDLAAKIDATADYICKVKWGDVDFPPPFGREA 246

Query: 246 SEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLD 298
             E++   +++AK      L+ +   G I  MV G G ++   D I   GG    AN+ +
Sbjct: 247 YPEEAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306

Query: 299 VGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MRCDVLVKGILSAVKEVK- 350
             G   +    D       ++T +   +G ++ I G I          KGI+ A+K+ + 
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIKDYQG 366

Query: 351 ----INIPLVMRLEGANVDIGNRLIAESG 375
                 + + +R  G N   G R++ E G
Sbjct: 367 PLKEHEVRIFVRRGGPNYQEGLRVMGEVG 395


>gi|74204023|dbj|BAE29010.1| unnamed protein product [Mus musculus]
          Length = 1034

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    V F    +GG+D+ +V      K  KLL+     + +ED+     +
Sbjct: 118 EFYVCIYATREGDYVLF--HHEGGVDVGDVD----AKAQKLLVGVDEKLNTEDIKRHLLV 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              + +  +        L+  + D   + LEINPL++ K+G + +LD     D  A Y  
Sbjct: 172 HAPEDKKEVLA-SFISGLFNFYEDLYFTYLEINPLVVTKDG-VYILDLAAKVDATADYIC 229

Query: 235 --RHLDIQEL----RDVSEEDSR--EIEAKQH---NLSYIALDGNIGCMVNGAGLAMATM 283
             +  DI+      R+   E++   +++AK      L+ +     I  MV G G ++   
Sbjct: 230 KVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKVRIWTMVAGGGASVVYS 289

Query: 284 DIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVKGILINIFGGI---MR 334
           D I   GG    AN+ +  G   +    D       ++T +   +G ++ I G I     
Sbjct: 290 DTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTN 349

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                KGI+ A+++ +       + + +R  G N   G R++ E G
Sbjct: 350 VAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVG 395


>gi|156379982|ref|XP_001631734.1| predicted protein [Nematostella vectensis]
 gi|156218779|gb|EDO39671.1| predicted protein [Nematostella vectensis]
          Length = 79

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          +++HE+ +  +L+   +   KG V  +   A      L     VVK+Q+ AGGRGKG+F+
Sbjct: 8  LSVHEHHSMKILQDAGILTPKGGVARTAEQAYEIATVLVEGDMVVKAQVLAGGRGKGKFE 67

Query: 61 ELPADSKGGVRV 72
                KGGVR+
Sbjct: 68 ---GGLKGGVRI 76


>gi|73294119|gb|AAZ74673.1| ATP citrate lyase beta subunit [Hydrogenimonas thermophila]
          Length = 296

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 29/194 (14%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-----ASLCDMLELQGQARIDGGDL 190
           S +GGM++EE    + +K+ ++ I   I +T E++     A++ + +  + + R      
Sbjct: 44  SAEGGMEVEE---GWDEKVNEVRIP--INMTDEEMEKAVRANVPEGIPAENKERF--AKF 96

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQ-----E 241
               +K + D + + LEINP+++++N    +LD     DD A +    +  DI+      
Sbjct: 97  AIQFFKFYRDLNFAYLEINPIVMIEN-NAHILDLVARLDDTAGFLMRDKWGDIEFPTPFG 155

Query: 242 LRDVSEEDSREIEAKQHN-----LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--A 294
           + D S E+    EA   +     L+ +   G I  MV G G ++   D I    G    A
Sbjct: 156 MEDQSPEEKAIAEADAKSGASLKLTILNPKGRIWTMVAGGGASVVYADTIADLAGVEDLA 215

Query: 295 NFLDVGGGADQDKV 308
           N+ +  GG  + + 
Sbjct: 216 NYGEYSGGPTESET 229


>gi|114054990|gb|ABI50077.1| ATP citrate lyase beta subunit [Desulfurobacterium crinifex]
          Length = 433

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 37/262 (14%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
           S  GG+D+EE       K+ +++I P++    E    + + +  + + +    D    LY
Sbjct: 143 SAFGGIDVEENW----DKVREVVI-PVLATDEEAEKLIEENVPEEIKDKEKYADFVKRLY 197

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELR-----DVSE 247
           K F D   + LEINPL+++ N ++  LD     DD A +   R     E       +++ 
Sbjct: 198 KFFKDMHFAYLEINPLVMVGN-KIYPLDFVGRLDDTAQFLVGRKWGEIEFPAGFGGELTP 256

Query: 248 EDS--REIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYG--GAPANFLDVG 300
           E+   +E++ K      L+ +  +G I  +V G G ++   D +   G     AN+ +  
Sbjct: 257 EEKYIKEMDEKSGASLKLTILNPEGRIWTLVAGGGASVVYADTVADLGYVNELANYGEYS 316

Query: 301 GGAD----QDKVAAAFKIITSDSSVKG---ILINIFGGIMRCDVLVK---GILSAVKEV- 349
           G       ++ V     ++T     +G   ILI I G I     + K   GI+ A KE  
Sbjct: 317 GNPSRAETREYVKTVLDLMTRKKDPQGRPKILI-IGGAIANFTDVAKTFDGIIDAFKEYA 375

Query: 350 ----KINIPLVMRLEGANVDIG 367
               ++ + + +R  G N ++G
Sbjct: 376 DKMKEVGVKIYVRRGGPNYEVG 397


>gi|325295317|ref|YP_004281831.1| ATP-grasp domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065765|gb|ADY73772.1| ATP-grasp domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 433

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 37/262 (14%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
           S  GG+D+EE       K+ +++I P++    E    + + +  + + +    D    LY
Sbjct: 143 SAFGGIDVEENW----DKVKEVVI-PVLATDEEAEKLIEENVPEEIKDKEKYADFVKRLY 197

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELR-----DVSE 247
           K F D   + LEINPL+++ N ++  LD     DD A +   R     E       +++ 
Sbjct: 198 KFFKDMHFAYLEINPLVMVGN-KIYPLDFVGRLDDTAQFLVGRKWGEIEFPAGFGGELTP 256

Query: 248 EDS--REIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYG--GAPANFLDVG 300
           E+   +E++ K      L+ +  +G I  +V G G ++   D +   G     AN+ +  
Sbjct: 257 EEKYIKEMDEKSGASLKLTILNPEGRIWTLVAGGGASVVYADTVADLGYVNELANYGEYS 316

Query: 301 GGAD----QDKVAAAFKIITSDSSVKG---ILINIFGGIMRCDVLVK---GILSAVKEV- 349
           G       ++ V     ++T     +G   ILI I G I     + K   GI+ A KE  
Sbjct: 317 GNPSRAETREYVKTVLDLMTRKKDPQGRPKILI-IGGAIANFTDVAKTFDGIIDAFKEYA 375

Query: 350 ----KINIPLVMRLEGANVDIG 367
               ++ + + +R  G N ++G
Sbjct: 376 DKMKEVGVKIYVRRGGPNYEVG 397


>gi|256068577|ref|XP_002570852.1| succinyl-CoA synthetase beta chain [Schistosoma mansoni]
 gi|238651622|emb|CAZ38537.1| succinyl-CoA synthetase beta chain, putative [Schistosoma mansoni]
          Length = 84

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 46  KSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC 105
           K+QI AGGRG G F++     KGGV +      +   + ++LG+ LITKQT  +G  V+ 
Sbjct: 13  KAQIPAGGRGMGVFRD---GFKGGVHLTKDPDEMALIVSKMLGNHLITKQTTSSGILVSQ 69

Query: 106 VYVEDG 111
           V +  G
Sbjct: 70  VSLRIG 75


>gi|237756013|ref|ZP_04584596.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691829|gb|EEP60854.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 435

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 30/216 (13%)

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQEL-- 242
           GD     YK F D      E+NPL+++ N  + +LD     DD A +   +     E   
Sbjct: 190 GDFVVRAYKMFRDLHFVYFEVNPLVMVDNN-VYLLDFVGKVDDTAAFVVGKKWGELEFPA 248

Query: 243 ---RDVSEEDS--REIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYG--GA 292
              RD++ E+   +E++ K  +   L+ +  +G I  +V G G ++   D I   G    
Sbjct: 249 GFGRDLTPEEKYIKELDEKSGSSLKLTILNPEGRIWTLVAGGGASVVYADTIADMGYVNE 308

Query: 293 PANFLDVGGGADQDKVAAAFKII------TSDSSVKGILINIFGGIMRCDVLVK---GIL 343
            AN+ +  G   + +     K +      +   S K  ++ I G I     + K   GI+
Sbjct: 309 LANYGEYSGNPTRTETREYVKTVLDLMTRSKHPSGKPKILLIGGAIANFTDVAKTFDGII 368

Query: 344 SAVKEV-----KINIPLVMRLEGANVDIGNRLIAES 374
            A KE      ++ + + +R  G N ++G + I ++
Sbjct: 369 DAFKEYADKMKQVGVKIYVRRGGPNYEVGLKRIKQA 404


>gi|225571893|ref|ZP_03780763.1| hypothetical protein CLOHYLEM_07867 [Clostridium hylemonae DSM
           15053]
 gi|225159450|gb|EEG72069.1| hypothetical protein CLOHYLEM_07867 [Clostridium hylemonae DSM
           15053]
          Length = 87

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 37/75 (49%)

Query: 318 DSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLN 377
           + S   + +N+FGGI  C  + +GI  A  E+ I  P+V++  G N + G  +  + G  
Sbjct: 1   NKSTDYVFVNVFGGINNCADMAEGIARAYTELGIRKPVVVKSRGFNQEQGWSIYEKLGFP 60

Query: 378 VITAIDLDDAAQKIV 392
                  D+A Q ++
Sbjct: 61  QTKYGTTDEAVQTLL 75


>gi|91975831|ref|YP_568490.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5]
 gi|91682287|gb|ABE38589.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5]
          Length = 907

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 97/243 (39%), Gaps = 54/243 (22%)

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLR--VLDSKI--------------SFDDNALYRHLDI 239
           + F     +   + P++++K+GR+    + ++               +F    + R  D+
Sbjct: 220 RKFMSAARAAARVKPVVVVKSGRMAHGAMAAETHTGALAGADAVYGAAFRRAGMLRVFDL 279

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA----- 294
           +EL D +E   R + A +           +  + NG G+ +  +D +   GG PA     
Sbjct: 280 RELFDCAETLGR-VSAPRGK--------RVAILTNGGGIGVLAVDRLAELGGIPATLSKD 330

Query: 295 ----------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDV 337
                           N +D+ G AD ++ AA+  ++ +D     IL+ N+   +     
Sbjct: 331 VCDKLDAVLPPSWSGSNPIDITGDADAERYAASLAVLLADPDNDAILVMNVQTAMTSSAE 390

Query: 338 LVKGILSAVKEVKIN----IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           + K ++  V E ++      P+     GA+  +     A S  N +T    DDA + I++
Sbjct: 391 IAKAVIRVVGEERVRRSFFKPVFAVWVGADDTVTKAFDAASIPNYLTE---DDAVRSIIN 447

Query: 394 AVK 396
            V+
Sbjct: 448 LVR 450


>gi|302036204|ref|YP_003796526.1| ATP-citrate lyase subunit beta [Candidatus Nitrospira defluvii]
 gi|300604268|emb|CBK40600.1| ATP-citrate lyase, beta subunit [Candidatus Nitrospira defluvii]
          Length = 399

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 81/397 (20%), Positives = 153/397 (38%), Gaps = 58/397 (14%)

Query: 11  LLRKYNVPVAKGVVISSVHAAE---SAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           L++K+ + V   VV++SV        A + L     V K+    G R K           
Sbjct: 12  LMKKWGINVPNYVVVTSVDELSRLGQANEWLKKSKLVAKAHEALGSRFK----------L 61

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           G V+++   K+  +  +E++G     +Q G     V  V V +      E Y ++   R 
Sbjct: 62  GLVKIDLDFKAAEAATKEMIG-----RQVGSI--TVTQVIVSEMIPHKEEYYCAVKSTRE 114

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
              V  + +  GG+++E       +++ +L ++     + E +  L       G      
Sbjct: 115 GSEV--LVANCGGIEVE----SNWERVKRLCLEIGQAPSPESLEKLSKEAGFSGPLAKKV 168

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLII-MKNGRLRVLDSKISFDDNALYRHLDIQ-----E 241
            +    ++  F  +D   LE+NP+++   +  L  LD+    D +A +RH D       E
Sbjct: 169 AEFAGKMFACFDSEDAQYLEVNPVVLRAADEELVALDAVTLLDGDAKFRHPDWNFAFAAE 228

Query: 242 LRDVSEEDSREIEAK----QHNLSYIALDGNIGCMVN-GAGLAMATMDIIKLYGGAPANF 296
                 +   E+ A     + ++ +I + G    M+  G G ++   D +   GG  AN+
Sbjct: 229 FGRAYSKQELEVMAVDSKIKGSVKFIEIPGGDTAMLPAGGGASVYYSDAVVARGGKLANY 288

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILI-----------NIFGGIMRCDVLVKGILSA 345
            +  G      V    + + S   ++ I++             FGGI      + G   A
Sbjct: 289 AEYSGDPPDWAVEVLTEKVCSLPGIRNIIVGGAIANFTDVKKTFGGI------INGFRKA 342

Query: 346 VKEVKI-NIPLVMRLEGANVDIG---NRLIAESGLNV 378
             E K+ N+ + +R  G     G    R + E G ++
Sbjct: 343 KSEGKLKNVKIWVRRGGPREKEGLDAMRALKEEGFDI 379


>gi|302342545|ref|YP_003807074.1| ATP-grasp domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639158|gb|ADK84480.1| ATP-grasp domain protein [Desulfarculus baarsii DSM 2075]
          Length = 228

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 45/237 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ---IHAGGRGKGRF 59
           + EY +K +L  Y VPV + ++  S   A +A + L GP+ +       +H   RG  R 
Sbjct: 19  LSEYDSKKVLAAYGVPVTREILAGSADEAIAAAQVLGGPVALKACSAKLLHKTERGAVRL 78

Query: 60  K-ELPADSKGG----VRVESSLKSV-----ISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               PAD        + +E  L  V     +S  RE++       Q GP      CV + 
Sbjct: 79  GLRQPADIARAFAELMALEPDLDGVLVQEMVSGARELVMGLKRDAQFGP------CVMLG 132

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
            G  +L E    +L D      AF A+    +D  E      Q   K ++    G    D
Sbjct: 133 LGG-VLTE----ILAD-----TAFRAAP---IDAIEARDMCDQLRGKAMLGAFRGQAPAD 179

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
           + +LC  L   G+  +D     P +         S +++NPLII  NGRL  +D+ +
Sbjct: 180 MDALCAALVGLGRIGLD----LPAV---------SEIDVNPLIIDANGRLAAVDALV 223


>gi|320528725|ref|ZP_08029877.1| putative aspartate transaminase [Solobacterium moorei F0204]
 gi|320130935|gb|EFW23513.1| putative aspartate transaminase [Solobacterium moorei F0204]
          Length = 391

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 22/138 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAES---AIKT---------LPGPLYVVKSQ 48
           + IHEY    LLRKYN+      +I +V A+E      +T         LP P YV    
Sbjct: 74  LAIHEY----LLRKYNLDYDIDQMIVTVGASEGIDLVFRTIVEEGDEVILPDPGYVTYQP 129

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESS-LKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
             A    K   K + A  + G R++++ +K+ I+D  + +   L++    PTG+ ++   
Sbjct: 130 TAAFAGAK--IKYVKAKVENGFRIQAADIKAAITDKTKAI---LLSYPNNPTGATLSYKE 184

Query: 108 VEDGADILRELYLSLLVD 125
           +E+ A++LR+  + ++ D
Sbjct: 185 MEEIAEVLRDTNILVISD 202


>gi|156374103|ref|XP_001629648.1| predicted protein [Nematostella vectensis]
 gi|156216653|gb|EDO37585.1| predicted protein [Nematostella vectensis]
          Length = 1089

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 28/279 (10%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +   R    + F    +GG+DI +V      K  KL I     VT+  +     M
Sbjct: 116 EHYVCIYAQRHCDTILFYH--EGGVDIGDVD----SKAIKLDIGLQEKVTAVWLEKTL-M 168

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
           + +  Q +    +    LY  F D   + LEINPL+++ + ++  LD     D  A +  
Sbjct: 169 INVPEQKKKPLAEFVHALYSLFTDLYFTYLEINPLVMVAD-KIYALDLAAKLDQTAEFIC 227

Query: 235 --RHLDIQELRDVSEEDSREIEAKQH-NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
             +  DI+       +   E+ +     L+ +   G I  MV G G ++   D I   GG
Sbjct: 228 KTKWGDIEFPPPFGRDAFPEVHSGASLKLTILNRRGRIWTMVAGGGASVIYSDTICDLGG 287

Query: 292 AP--ANFLDVGGGADQ----DKVAAAFKIITSDSS----VKGILINIFGGIMRCDVLVKG 341
           A   AN+ +  G   +    +      K++T           I+              KG
Sbjct: 288 AMELANYGEYSGAPSEGQTFEYAKTLLKLMTEGEPHPDGKILIIGGGIANFTNVSATFKG 347

Query: 342 ILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           I+ A++      ++ N+ + +R  G N   G R++ E G
Sbjct: 348 IVRALQNFQKNLIEHNVEVFVRRGGPNYQEGLRIMREVG 386


>gi|312114586|ref|YP_004012182.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219715|gb|ADP71083.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 887

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL-INIFGGIMRCDVLVKGILSAVKE 348
           G  PAN +D+G GA  D   AA K+++    V GIL I+    +     + + ++ A K 
Sbjct: 337 GRRPANPVDLGAGASADDYTAALKVLSEALEVDGILIIHAPNAMTDSSEIARAVVEAQKR 396

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGL 376
            +  + L   L G        L AE+GL
Sbjct: 397 YRSGV-LACWLGGETASAALALFAEAGL 423


>gi|121535468|ref|ZP_01667278.1| phosphoribosylamine--glycine ligase [Thermosinus carboxydivorans
           Nor1]
 gi|121305977|gb|EAX46909.1| phosphoribosylamine--glycine ligase [Thermosinus carboxydivorans
           Nor1]
          Length = 425

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AKAL++KYN+P AK  V   + AA   I+    P+ VVK+   A G+G
Sbjct: 106 AKALMQKYNIPTAKFAVFEDIAAAMDCIRRWGAPV-VVKADGLAAGKG 152


>gi|332664762|ref|YP_004447550.1| GCN5-like N-acetyltransferase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333576|gb|AEE50677.1| GCN5-related N-acetyltransferase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 890

 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 52/257 (20%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +++AKALL  Y +PV +GV+  +V  A +A K L  PL +       G +          
Sbjct: 491 DHEAKALLAAYQIPVNRGVLCQTVDEAAAAGKQLGYPLALKLVSPDIGHK---------- 540

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +    ++    +R    +TL   +T   G+R   V VE       E+ +    
Sbjct: 541 TDVGGVSLHLQDENA---LRLAFRNTLHNLETQRPGARAAGVIVEKMIYRPFEIIIGAKK 597

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE------ 178
           D   G V  I   +GG+ +E         +FK   D  +G+   ++A    ++E      
Sbjct: 598 DPVFGPV--IVFGRGGIAVE---------VFK---DTQMGLPPLNMALAQRLIEGTRMYP 643

Query: 179 -LQGQARIDGGDL---------FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            L+G   + G +L         F  L   F   ++  +E+NPL+   NG + V+D+ +  
Sbjct: 644 LLRGYRGLPGSNLAELDYLLCKFSYLVMDF--PEIKEIEMNPLLADANGGI-VVDATVVL 700

Query: 229 DDNAL------YRHLDI 239
           ++N L      YRHL I
Sbjct: 701 EENHLEQSGPEYRHLVI 717


>gi|86748496|ref|YP_484992.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2]
 gi|86571524|gb|ABD06081.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2]
          Length = 907

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 54/243 (22%)

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLR--VLDSKI--------------SFDDNALYRHLDI 239
           + F     +   + P++++K+GR+    L +                +F    + R  D+
Sbjct: 220 RKFMSAARAAARVKPVVVVKSGRMAHGALAAATHTGALAGADAVYGAAFRRAGMLRVFDL 279

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA----- 294
           +EL D +E   R + A +           +  + NG G+ +  +D +   GG PA     
Sbjct: 280 RELFDCAETLGR-VSAPRGK--------RVAILTNGGGIGVLAVDRLAELGGIPATLSKA 330

Query: 295 ----------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDV 337
                           N +D+ G AD ++ A A  I+ +D     IL+ N+   +     
Sbjct: 331 VCDKLDAVLPPTWSGSNPIDITGDADAERYAVALSILLADPENDAILVMNVQTAMASSAE 390

Query: 338 LVKGILSAVKEVKIN----IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           + K ++  V E ++      P+     GA+  +     A S  N  T    DDA + I++
Sbjct: 391 IAKAVIRVVGEERVRRSFFKPVFAVWVGADDAVTKAFDAASIPNYPTE---DDAVRSIIN 447

Query: 394 AVK 396
            V+
Sbjct: 448 LVR 450


>gi|115522044|ref|YP_778955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
           [Rhodopseudomonas palustris BisA53]
 gi|115515991|gb|ABJ03975.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein
           [Rhodopseudomonas palustris BisA53]
          Length = 485

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD--IGNR 369
           FK+I S + V   LI   GGIM   +L + +L  V  +    PL +RL   +V      R
Sbjct: 339 FKMIRSRTVVYASLIATVGGIMLYAMLTRSLLD-VNVLHDRNPLAVRLSDGSVRNAYTMR 397

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAV 395
           L+ + G + + AID++  A   +H +
Sbjct: 398 LLNKRGFDRVIAIDVEGPANATIHVI 423


>gi|219118523|ref|XP_002180032.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408289|gb|EEC48223.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1082

 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 113/294 (38%), Gaps = 38/294 (12%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ +  DR    + F A  +GG+D+ +V  D   K   + ID      + D     D+
Sbjct: 120 EYYICIQSDREGEEILFCA--EGGVDVGDV--DTKAKRLHVAIDD--DYLTPDRILEADL 173

Query: 177 LELQGQARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-- 233
           LE     R D        L+  +   +   +EINP++    G +  LD     D+ A   
Sbjct: 174 LEGVPADRQDSLASFVLTLFTVYRKLNFVYMEINPIVYTAEGTIVPLDLAAKIDETAAFL 233

Query: 234 ----YRHLDIQE---LRDVSEEDS-REIEAKQH---NLSYIALDGNIGCMVNGAGLAMAT 282
               + HLD       ++  EE   R+++AK      L+ +   G +  MV G G ++  
Sbjct: 234 NAPDWGHLDFPAPFGRKEFPEEAYIRDLDAKTGASLKLTILNHAGRVWTMVAGGGASVVY 293

Query: 283 MDIIK--LYGGAPANFLDVGGGADQDKVAAAFKIITS-------DSSVKGILINIFGGIM 333
            D I    +G   AN+ +  G    +      K + S             I+        
Sbjct: 294 ADTISDLGFGHELANYGEYSGAPSTEHTFEYAKTLISLMTREKDPRGKIFIIGGGIANFT 353

Query: 334 RCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLI----AESGLNV 378
                  G++ A+K  +      +I + +R  G N   G RL+    AE+GL++
Sbjct: 354 DVAATFTGLIKAIKAFQEILKAHHIKIWVRRAGPNYQEGLRLMRDCGAETGLDI 407


>gi|316973647|gb|EFV57211.1| ATP-citrate synthase [Trichinella spiralis]
          Length = 1157

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 54/302 (17%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLC 174
           E Y+ +   R+  +V F    +GG+D+ +V     QK   L I PL    S  E V+ L 
Sbjct: 117 ECYVCIYSVRSGDVVLFYH--RGGIDVGDVD----QKSENLFI-PLEKTPSYVEIVSKLL 169

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISFDDNAL 233
             L+   + ++   +    LY+ + +   + LEINPL++  + + + +LD     D  A 
Sbjct: 170 INLKCNVKKQL-VAEFIIKLYQLYVNLHFTYLEINPLLVNGDDKTIYMLDIAAKLDSAAD 228

Query: 234 Y----------------RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAG 277
           +                R L + E + V+E DSR        L+ +  DG I  MV G G
Sbjct: 229 FMCRRQWGEIEFPTPFGRQL-LPEEQYVAELDSR--SGASLKLTVLNKDGRIWTMVAGGG 285

Query: 278 LAM---------ATMDIIKLYGGAP--ANFLDVGGGADQ----DKVAAAFKIITSDSSVK 322
            +          +  D I   G A   AN+ +  G   +    +      K++TS    K
Sbjct: 286 ASFLFYLLCFSNSYSDTICDMGEASELANYGEYSGAPTEVQTYEYAKTILKLMTSTKVHK 345

Query: 323 GILINIFGG----IMRCDVLVKGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLIAE 373
              + I GG            KGI+ A++E ++      + + +R  G N   G RL+ E
Sbjct: 346 SGKVLIIGGSIANFTNVADTFKGIILALEEYRLELIRHKVSIYVRRGGPNFQEGLRLMKE 405

Query: 374 SG 375
           +G
Sbjct: 406 AG 407


>gi|225848355|ref|YP_002728518.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage
           enzyme) [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643229|gb|ACN98279.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage
           enzyme) [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 435

 Score = 36.6 bits (83), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 41/271 (15%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFP 192
           S  GG+D+EE       K+ ++ I P    + E++  L       E++ + +    D   
Sbjct: 143 SAFGGIDVEENW----DKVSEVKIPPT--ASDEEIEKLIKQNVPKEIKDKEKY--ADFVI 194

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQEL-----RD 244
             YK F D      EINPL+++ N +  +LD     DD A +   +     E      RD
Sbjct: 195 RAYKMFRDLHFVYFEINPLVLVGN-KAYLLDFVGKVDDTAGFVVGKKWGELEFPSGFGRD 253

Query: 245 VSEEDS--REIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYG--GAPANFL 297
           ++ E+   +E++ K  +   L+ +  +G I  +V G G ++   D +   G     AN+ 
Sbjct: 254 LTPEEKYIKELDEKSGSSLKLTILNPEGRIWTLVAGGGASVVYADTVADMGYVNELANYG 313

Query: 298 DVGGGADQDKVAAAFKII------TSDSSVKGILINIFGGIMRCDVLVK---GILSAVKE 348
           +  G   + +     K +          S K  ++ I G I     + K   GI+ A KE
Sbjct: 314 EYSGNPTRTETREYVKTVLDLMTRNKHPSGKPKILLIGGAIANFTDVAKTFDGIIDAFKE 373

Query: 349 V-----KINIPLVMRLEGANVDIGNRLIAES 374
                 ++ + + +R  G N ++G + I ++
Sbjct: 374 YAEKMRQVGVRIYVRRGGPNYEVGLKKIKQA 404


>gi|541242|pir||S42876 probable succinate-CoA ligase (ADP-forming) (EC 6.2.1.5) beta
          chain - Coxiella burnetii (fragment)
          Length = 35

 Score = 36.2 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA 34
          MN+HEYQ+K LL KYN+ V    V+ +  AA  A
Sbjct: 1  MNLHEYQSKYLLNKYNIAVPASEVVFNPDAAVDA 34


>gi|114055039|gb|ABI50084.1| ATP citrate lyase beta subunit [Sulfurihydrogenibium subterraneum]
          Length = 435

 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 41/271 (15%)

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFP 192
           S  GG+D+EE       K+ ++ I P    + E++  L       E++ + +    D   
Sbjct: 143 SAFGGIDVEENW----DKVSEVKIPPT--ASDEEIEKLIKQNVPKEIKDKEKY--ADFVI 194

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY----RHLDIQEL----RD 244
             YK F D      EINPL+++ N +  +LD     DD A +    +  D +      RD
Sbjct: 195 RAYKMFRDLHFVYFEINPLVLVGN-KAYLLDFVGKVDDTAGFVAGKKWGDFEFPSGFGRD 253

Query: 245 VSEEDS--REIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYG--GAPANFL 297
           ++ E+   +E++ K  +   L+ +  +G I  +V G G ++   D +   G     AN+ 
Sbjct: 254 LTPEEKYIKELDEKSGSSLKLTILNPEGRIWTLVAGGGASVVYADTVADMGYVNELANYG 313

Query: 298 DVGGGADQDKVAAAFKII------TSDSSVKGILINIFGGIMRCDVLVK---GILSAVKE 348
           +  G   + +     K +          S K  ++ I G I     + K   GI+ A KE
Sbjct: 314 EYSGNPTRTETREYVKTVLDLMTRNKHPSGKPKILLIGGAIANFTDVAKTFDGIIDAFKE 373

Query: 349 V-----KINIPLVMRLEGANVDIGNRLIAES 374
                 ++ + + +R  G N ++G + I ++
Sbjct: 374 YAEKMRQVGVRIYVRRGGPNYELGLKRIKQA 404


>gi|254457438|ref|ZP_05070866.1| CoA_binding Ligase_CoA Citrate_synt [Campylobacterales bacterium GD
           1]
 gi|207086230|gb|EDZ63514.1| CoA_binding Ligase_CoA Citrate_synt [Campylobacterales bacterium GD
           1]
          Length = 445

 Score = 36.2 bits (82), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 21/127 (16%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
            +KA+ + + + LEINP  +M+  ++ +LD     DD A +  + ++E  DV    +  +
Sbjct: 209 FFKAYRELNFAYLEINPF-VMQGKKIELLDMVAKLDDTAGF--MMVEEWGDVEYPTAFGM 265

Query: 254 EAKQHN----------------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--AN 295
           EAK                   L+ +  +  I  MV G G ++   D I    G    AN
Sbjct: 266 EAKSPEVAAIEEADSKTGASLKLTLLKPEARIWTMVAGGGASVVYADTIADLAGIDDLAN 325

Query: 296 FLDVGGG 302
           + +  GG
Sbjct: 326 YGEYSGG 332


Searching..................................................done


Results from round 2




>gi|254781049|ref|YP_003065462.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040726|gb|ACT57522.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 398

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 398/398 (100%), Positives = 398/398 (100%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK
Sbjct: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL
Sbjct: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ
Sbjct: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ
Sbjct: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG
Sbjct: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE
Sbjct: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV
Sbjct: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398


>gi|239833053|ref|ZP_04681382.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum intermedium LMG
           3301]
 gi|239825320|gb|EEQ96888.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum intermedium LMG
           3301]
          Length = 432

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 275/397 (69%), Positives = 336/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 35  MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 95  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 155 SILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP LYKAF +KDMSLLEINPLI+M +GR+RVLD+K+SFD NAL+RH DIQ
Sbjct: 215 GQAREDGVKLFPILYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQ 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 275 ELRDLSEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 335 GGASKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 395 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 431


>gi|319407858|emb|CBI81511.1| succinyl-CoA synthetase, beta chain [Bartonella sp. 1-1C]
          Length = 398

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 284/397 (71%), Positives = 335/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  PVA GV I SV  AE+ +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPVANGVAIYSVEQAENWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +DSKGGVR+  S++ VI++++E+LG TLITKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSSDSKGGVRLAKSVEEVITNVKEMLGKTLITKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V+F+ ST+GGMDIE VA++ P+KIF L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTIGQVSFVVSTEGGMDIETVAEETPEKIFTLPIDPTKGVTPSDCTKLCDSLKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAF +KDMSLLEINPLI+M NGRLRVLD+K+SFD+NALYRH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFYEKDMSLLEINPLIVMNNGRLRVLDAKVSFDNNALYRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEEDS+EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDISEEDSKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISESGLNVISADDLDDAAQKIVAAVKG 397


>gi|319406382|emb|CBI80023.1| succinyl-CoA synthetase, beta chain [Bartonella sp. AR 15-3]
          Length = 398

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 279/397 (70%), Positives = 333/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV I SV  AE  +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLYEYGAPIANGVAIYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  +SKGGVR+  S++ VI++++E+LG TLITKQTGP G +VN +Y+EDGA+I RELYL
Sbjct: 61  ELGPNSKGGVRLAKSVEEVITNVKEMLGKTLITKQTGPEGKQVNRLYIEDGANIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V+F+ ST+GGMDIE VA++ P+KIF L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTVGQVSFVVSTEGGMDIETVAEETPEKIFTLPIDPTKGVTPTDCTKLCDSLKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LY+AFC+KDMSLLEINPLI+M NGRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYRAFCEKDMSLLEINPLIVMDNGRLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISESGLNVISADDLDDAAQKIVAAVKG 397


>gi|319404899|emb|CBI78500.1| succinyl-CoA synthetase, beta chain [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 398

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 284/397 (71%), Positives = 335/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV I SV  AE  +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAIYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +DSKGGVR+  S++ VI++++E+LG TLITKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSSDSKGGVRLAKSVEEVITNVKEMLGKTLITKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V+F+ ST+GGMDIE VA++ P+KIF L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTIGQVSFVVSTEGGMDIEMVAEETPEKIFTLPIDPTKGVTPSDCTKLCDSLKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+M NGRLRVLD+K+SFD+NALYRH DI 
Sbjct: 181 DSAREDGERLFPILYKAFCEKDMSLLEINPLIVMDNGRLRVLDAKVSFDNNALYRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEEDS+EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDSKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISESGLNVISADDLDDAAQKIVAAVKG 397


>gi|121602774|ref|YP_988362.1| succinyl-CoA synthetase subunit beta [Bartonella bacilliformis
           KC583]
 gi|189046885|sp|A1UQV9|SUCC_BARBK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120614951|gb|ABM45552.1| succinyl-CoA synthetase beta chain [Bartonella bacilliformis KC583]
          Length = 398

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 275/397 (69%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  PVA GV + SV  AE   K LPGPLYVVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPVANGVAVYSVEQAEKWAKKLPGPLYVVKSQIHAGGRGKGNFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGA+I RELYL
Sbjct: 61  ELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGANIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DRT+G VAF+ ST+GGMDIE VA + P+KI  L IDP  GVT  D   LCD L L 
Sbjct: 121 SLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDELNLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAFC+KDMSLLEINPLI+M +GRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GNAREDGEKLFPILYKAFCEKDMSLLEINPLIVMDDGRLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+SEED +EIEA +H+L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 GLRDISEEDPKEIEASKHDLAYIALDGMIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTHAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I +SGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIINDSGLNVISANDLDDAAQKIVAAVKG 397


>gi|83592547|ref|YP_426299.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|123526923|sp|Q2RV33|SUCC_RHORT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83575461|gb|ABC22012.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodospirillum
           rubrum ATCC 11170]
          Length = 399

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 232/396 (58%), Positives = 291/396 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L KY VPV KG V  +   AE     L GP+YVVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKQVLAKYGVPVLKGGVAYTAEEAEKVALDLAGPVYVVKSQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVRV  S   V S+ +++LG+TL+T Q+G  G  V  VY+EDG DI RELYL
Sbjct: 61  EPSAGDKGGVRVVKSTDEVFSNAKQMLGATLVTHQSGAEGKEVKRVYIEDGCDIKRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   ID   G++     ++   L L+
Sbjct: 121 SLLVDRATSAVTVMASTEGGMDIEEVANHSPEKIFFQAIDQATGISGFHCRNVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F + D S+LEINPL++  +G++  LD K++FD NALYRH DI 
Sbjct: 181 GKQVGAFTKLLSALYKCFTETDCSMLEINPLVVTGDGQVIPLDCKMNFDSNALYRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD  EED  E+EA +H+L+YI LDG+IGCMVNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 241 EYRDEDEEDPMELEASKHDLNYIKLDGSIGCMVNGAGLAMATMDIIKLKGGAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII SD +V GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 301 GGATRERVTAAFKIILSDPNVDGILVNIFGGIMRCDVIAEGVIAAAREVSLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGL +I+A +L DAA+K+V AVK
Sbjct: 361 GTNVELGKKIMVESGLPIISADNLADAAEKVVKAVK 396


>gi|294676277|ref|YP_003576892.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rhodobacter
           capsulatus SB 1003]
 gi|294475097|gb|ADE84485.1| succinyl-CoA synthetase (ADP-forming), beta subunit [Rhodobacter
           capsulatus SB 1003]
          Length = 397

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 298/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y  PV+ G ++      ++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKQLLKSYGCPVSNGRIVLKADEVKAAASELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+    +  R++LG TL+T QTGP G +VN +Y+E+G+DI RELYL
Sbjct: 61  EAEAGEKGGVRLARSVAEAETLARQMLGRTLVTHQTGPAGKQVNRIYIEEGSDISRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR S  V+F+ ST+GGMDIEEVA   P+KI    +DP  G++      +   L L+
Sbjct: 121 ALLIDRKSSRVSFVCSTEGGMDIEEVAAHTPEKILSFSVDPATGLSDFHGRRIAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+  +G+L+VLD+K+ FD+NALYR  D+ 
Sbjct: 181 GNQVKQCVSLIKKLYKAFLEKDMEMLEINPLIVTTDGQLKVLDAKLGFDNNALYRQPDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRDV+EED +E+EA + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 DLRDVTEEDPKELEASRFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCD++ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPKVKGILVNIFGGIMRCDIIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  +IA+SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKDIIAKSGLNVIAADDLADGAKKIVAAVKG 397


>gi|163869364|ref|YP_001610620.1| succinyl-CoA synthetase subunit beta [Bartonella tribocorum CIP
           105476]
 gi|189046886|sp|A9IZV3|SUCC_BART1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161019067|emb|CAK02625.1| succinyl-CoA synthetase, beta chain [Bartonella tribocorum CIP
           105476]
          Length = 398

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 274/397 (69%), Positives = 331/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + S+  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGRGKGQFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G +AF+ ST+GGMDIE VA++ P+KIF L ID   GVTS D A LCD LEL 
Sbjct: 121 SLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELH 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+G LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I +SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIINDSGLNVIPADDLDDAAQKIVAAVKG 397


>gi|146276136|ref|YP_001166295.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides ATCC
           17025]
 gi|189081782|sp|A4WNM6|SUCC_RHOS5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145554377|gb|ABP68990.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 397

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 238/397 (59%), Positives = 298/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A+SA   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+       +++LG TL+T QTGP+G +VN +Y+E+G+DI RELYL
Sbjct: 61  EPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPSGKQVNRIYIEEGSDIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G++      +   L L+
Sbjct: 121 ALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+AF +KDM +LEINPLI+M +G L+VLD+K+ FD+NALYR  DI 
Sbjct: 181 GAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYRQPDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI   +L DAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKAVKG 397


>gi|153008266|ref|YP_001369481.1| succinyl-CoA synthetase subunit beta [Ochrobactrum anthropi ATCC
           49188]
 gi|189081761|sp|A6WXE8|SUCC_OCHA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151560154|gb|ABS13652.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum anthropi ATCC
           49188]
          Length = 398

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 275/397 (69%), Positives = 337/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED + L D L+L+
Sbjct: 121 SILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP LYKAF +KDMSLLEINPLI+M +GR+RVLD+K+SFD NAL+RH DIQ
Sbjct: 181 GQAREDGVKLFPILYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|319899504|ref|YP_004159601.1| succinyl-CoA synthetase, beta chain [Bartonella clarridgeiae 73]
 gi|319403472|emb|CBI77052.1| succinyl-CoA synthetase, beta chain [Bartonella clarridgeiae 73]
          Length = 398

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 278/397 (70%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + SV  AE  +K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +DSKGGVR+  S+K VI++++E+LG TLITKQTGP G +VN +Y+E+GADI +ELYL
Sbjct: 61  ELGSDSKGGVRLAKSVKEVITNVKEMLGKTLITKQTGPEGKQVNRLYIENGADIEQELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G VAF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  D   LCD L+L 
Sbjct: 121 SLLVDRTIGQVAFVVSTEGGMDIEAVAEETPEKILTLPIDPTKGVTPTDCKKLCDALKLC 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+M NG LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSARKDGEKLFPILYKAFCEKDMSLLEINPLIVMDNGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDISEEDPKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVITAVKEVGLRVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I++SGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISKSGLNVISADDLDDAAQKIVAAVKG 397


>gi|260425789|ref|ZP_05779769.1| succinyl-CoA synthetase beta chain [Citreicella sp. SE45]
 gi|260423729|gb|EEX16979.1| succinyl-CoA synthetase beta chain [Citreicella sp. SE45]
          Length = 397

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 237/397 (59%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G ++ + + A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRDYGCPVSDGRIVLTANDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    +   +LG TL+T QTGP G +VN +Y+EDG+DI  E YL
Sbjct: 61  ESEAGEKGGVRLAKSVEEAAEEANRMLGHTLVTHQTGPAGKQVNRIYIEDGSDITSEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+ + ST+GGMDIEEVA   P+KI    IDP +G        +   L L 
Sbjct: 121 ALLVDRVTSRVSIVCSTEGGMDIEEVAASTPEKILSFSIDPAVGYQGFHGRRVAFALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +L  NLY+ F +KDM +LEINPLI+  +G L+ LD K  FD NALYRH DI 
Sbjct: 181 GKQIRQCTNLLSNLYRMFVEKDMEMLEINPLIVTTDGDLKCLDCKAGFDGNALYRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A QH+L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 GLRDETEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVLAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G  +IA SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVDLGKEIIANSGLNVIAADNLSDGAEKIVKAVKG 397


>gi|119383311|ref|YP_914367.1| succinyl-CoA synthetase subunit beta [Paracoccus denitrificans
           PD1222]
 gi|189081763|sp|A1AZH7|SUCC_PARDP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119373078|gb|ABL68671.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Paracoccus
           denitrificans PD1222]
          Length = 397

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 241/397 (60%), Positives = 300/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR+Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++      R++LG TL+T QTG TG +VN +Y+EDG+DI RELYL
Sbjct: 61  EKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+AST+GGMDIEEVA   P+KI    +DP  G++      +   L L 
Sbjct: 121 ALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+ F +KDM +LEINPLI+MK+G L+ LD+K+ FD+NALYR  DI 
Sbjct: 181 GAQVKQCVALVKNLYRMFIEKDMEMLEINPLIVMKDGNLKALDAKMGFDNNALYRQPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKL+G  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLFGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DL DAAQKIV AVKG
Sbjct: 361 GTNVELGKQIIGESGLNVIAADDLSDAAQKIVKAVKG 397


>gi|49476305|ref|YP_034346.1| succinyl-CoA synthetase subunit beta [Bartonella henselae str.
           Houston-1]
 gi|81647476|sp|Q6G1M1|SUCC_BARHE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49239113|emb|CAF28417.1| Succinyl-CoA synthetase beta chain [Bartonella henselae str.
           Houston-1]
          Length = 398

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 273/397 (68%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + SV  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ ST+GGMDIE VA++ P+KI  L I+   GVTS D A LCD L+L 
Sbjct: 121 SLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDALDLH 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+M NG LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMTNGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I++SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAAVKG 397


>gi|114764881|ref|ZP_01444063.1| succinyl-CoA synthetase subunit beta [Pelagibaca bermudensis
           HTCC2601]
 gi|114542767|gb|EAU45790.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. HTCC2601]
          Length = 397

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G ++ + + A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRDYGCPVSDGRIVLTANDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    +   +LG TL+T QTGP G +VN +Y+EDG+DI  E YL
Sbjct: 61  EHEAGEKGGVRLAKSVEEAADEANRMLGHTLVTHQTGPAGKQVNRIYIEDGSDITSEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++ + ST+GGMDIEEVA   P+KI    IDP +G        +   L L+
Sbjct: 121 ALLVDRVTSRISIVCSTEGGMDIEEVAASTPEKILSFSIDPAVGYQGFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A     +L  NLY+ F DKDM +LEINPLI+   G ++ LD K  FD NALYRH DI 
Sbjct: 181 GKAVRQCSNLLGNLYRMFTDKDMEMLEINPLILTTEGEIKCLDCKAGFDSNALYRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A QH+L+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 241 GLRDETEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDDNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I ESGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVDLGKKIINESGLDVIAADNLSDGAEKIVKAVKG 397


>gi|260431531|ref|ZP_05785502.1| succinyl-CoA synthetase beta chain [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415359|gb|EEX08618.1| succinyl-CoA synthetase beta chain [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 397

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 238/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRAVLRAEEAKTAAGELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN VY+E G+ I RELYL
Sbjct: 61  EPDAGDKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPEGKQVNRVYIEAGSGIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQPFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+ + G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GAQVKQCVRLMGILYKAFVEKDMEMLEINPLIVAEGGDLKVLDAKLSFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIINSSGLDVIAADNLDDAAQKIVKAVKG 397


>gi|159045418|ref|YP_001534212.1| succinyl-CoA synthetase subunit beta [Dinoroseobacter shibae DFL
           12]
 gi|157913178|gb|ABV94611.1| succinyl-CoA synthetase beta chain [Dinoroseobacter shibae DFL 12]
          Length = 397

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 230/397 (57%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G  VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGEKGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKTVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP+ G        +   L L 
Sbjct: 121 ALLVDRGTSRISFVCSTEGGMDIEEVAASTPEKILSFAVDPVTGYQPYHGRRIAFALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F +KDM +LEINPLI+  +G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYQCFVEKDMEMLEINPLIVTDSGDLKCLDAKMGFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINSSGLNVIAAENLRDGAEKIVAAVKG 397


>gi|85706368|ref|ZP_01037462.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
 gi|85669141|gb|EAQ24008.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
          Length = 397

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV++G V+     A++A   L GP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSEGRVVLRGEEAKTAAGALDGPVWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+     + + +LG TL+T QTGP G +VN +Y+EDG+ I RELYL
Sbjct: 61  EAGAGEKGGVRIAKSVNEAAEEAKRMLGRTLVTHQTGPAGKQVNRIYIEDGSSIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L 
Sbjct: 121 ALLIDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFAVDPATGYMPFHGRRIAFALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  +G L VLD+K+ FD NA+YRH DI 
Sbjct: 181 GGQIKQCVSLMGILYRAFVEKDMEMLEINPLIVTTSGDLMVLDAKLGFDGNAVYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|77464547|ref|YP_354051.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides
           2.4.1]
 gi|126463387|ref|YP_001044501.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides ATCC
           17029]
 gi|221640458|ref|YP_002526720.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides
           KD131]
 gi|332559440|ref|ZP_08413762.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides WS8N]
 gi|123590983|sp|Q3IZ84|SUCC_RHOS4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081781|sp|A3PN13|SUCC_RHOS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778449|sp|B9KNB3|SUCC_RHOSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77388965|gb|ABA80150.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|126105051|gb|ABN77729.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161239|gb|ACM02219.1| Succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
           sphaeroides KD131]
 gi|332277152|gb|EGJ22467.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides WS8N]
          Length = 397

 Score =  511 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 237/397 (59%), Positives = 297/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A+SA   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+       +++LG TL+T QTGP G +VN +Y+E+G+DI RELYL
Sbjct: 61  EPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G++      +   L L+
Sbjct: 121 ALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+AF +KDM +LEINPLI+M +G L+VLD+K+ FD+NALYR  D+ 
Sbjct: 181 GAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYRQSDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI   +L DAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKAVKG 397


>gi|149913128|ref|ZP_01901662.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
 gi|149813534|gb|EDM73360.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
          Length = 397

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EPGAGEAGGVRLARSVEEAAEEAKRMLGRTLVTKQTGPAGKQVNRIYIEDGSDIEKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F AST+GGMDIEEVA+  P+KI    +DP  G        +  ML L+
Sbjct: 121 ALLVDRVTSRISFAASTEGGMDIEEVAEKTPEKILSFSVDPATGYQPFHGRRIAFMLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F DKDM +LEINPLII   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGILYQLFLDKDMEMLEINPLIITDKGDLKCLDAKMGFDSNAVYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I+ SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIISNSGLDVIAADNLKDGAEKIVKAVKG 397


>gi|56419743|ref|YP_147061.1| succinyl-CoA synthetase subunit beta [Geobacillus kaustophilus
           HTA426]
 gi|261419408|ref|YP_003253090.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y412MC61]
 gi|297530617|ref|YP_003671892.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. C56-T3]
 gi|319766223|ref|YP_004131724.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y412MC52]
 gi|81347630|sp|Q5L0N7|SUCC_GEOKA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56379585|dbj|BAD75493.1| succinyl-CoA synthetase beta subunit (succinate-CoA ligase beta
           subunit) [Geobacillus kaustophilus HTA426]
 gi|261375865|gb|ACX78608.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y412MC61]
 gi|297253869|gb|ADI27315.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. C56-T3]
 gi|317111089|gb|ADU93581.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y412MC52]
          Length = 386

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 209/396 (52%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKELGAPVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     L   + + 
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+ F DKD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI++A K+V + +PLV+RLE
Sbjct: 291 GGASEEKVREAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+I A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNIIAAESMADGAQKIVELVR 386


>gi|89068133|ref|ZP_01155550.1| succinyl-CoA synthetase subunit beta [Oceanicola granulosus
           HTCC2516]
 gi|89046372|gb|EAR52429.1| succinyl-CoA synthetase subunit beta [Oceanicola granulosus
           HTCC2516]
          Length = 397

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 238/397 (59%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A+SA   L GPL+VVK+QIHAGGRGKG F+
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRAVFRAEEAKSAAGELDGPLWVVKAQIHAGGRGKGSFQ 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + + +LG TL+T QTGP G +VN VY+EDG+DI RELYL
Sbjct: 61  EADAGDKGGVRLAKSVEEAAEEAKRMLGRTLVTHQTGPAGKQVNRVYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+AST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRVSFVASTEGGMDIEEVAASTPEKILSFSVDPATGYQPFHGRRIGFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      L   LYK F ++DM +LEINPLI+   G L+ LD+KI FD NALYR  DI 
Sbjct: 181 GAALKQCVKLMGTLYKMFVERDMEMLEINPLIVTDKGDLKCLDAKIGFDGNALYRQPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDAKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA+SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIIAQSGLNVIAADDLKDGAEKIVKAVKG 397


>gi|260576571|ref|ZP_05844559.1| succinyl-CoA synthetase, beta subunit [Rhodobacter sp. SW2]
 gi|259021175|gb|EEW24483.1| succinyl-CoA synthetase, beta subunit [Rhodobacter sp. SW2]
          Length = 397

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 233/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR +  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKALLRGFGAPVSDGRVVLRAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGSFL 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+       R++LG TL+T+QTGP G  VN +Y+EDG+DI RELYL
Sbjct: 61  EPEAGEKGGVRLARSVSEAAEFARQMLGRTLVTEQTGPAGKVVNRIYIEDGSDIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR++  ++F+AST+GGM IE+VA   P+KI    +DP  G++      +   L L 
Sbjct: 121 ALLIDRSTSRISFVASTEGGMSIEDVAHATPEKILTFSVDPASGLSDFHGRRIAFSLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +      L   LYKAF +KDM +LEINPLI+   G L+ LDSK+SFD NALYRH D+ 
Sbjct: 181 GNSVKQCVALVKTLYKAFVEKDMDMLEINPLIVTPAGDLKCLDSKMSFDGNALYRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  +I  SGL+VI   +L DAAQKIV AVKG
Sbjct: 361 GTNVELGKEIIRNSGLDVIAGDNLSDAAQKIVKAVKG 397


>gi|84684234|ref|ZP_01012136.1| succinyl-CoA synthetase subunit beta [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667987|gb|EAQ14455.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
           HTCC2654]
          Length = 397

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++    L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRDYGAPVSDGRVVMKAEEAKTKASELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EESAGEKGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPFHGRRIAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYK F ++DM +LEINPLI+   G L+VLD+K  FD NALYR  DI 
Sbjct: 181 GPQVKQCVSLMGTLYKVFTERDMEMLEINPLIVTDGGDLKVLDAKFGFDGNALYRQPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 NLRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  +IA SGLNVI A DL D AQKIV AVKG
Sbjct: 361 GTNVDKGKEIIANSGLNVIAADDLKDGAQKIVKAVKG 397


>gi|17986422|ref|NP_539056.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 1
           str. 16M]
 gi|23502776|ref|NP_698903.1| succinyl-CoA synthetase subunit beta [Brucella suis 1330]
 gi|62290780|ref|YP_222573.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 1 str.
           9-941]
 gi|148559974|ref|YP_001259750.1| succinyl-CoA synthetase subunit beta [Brucella ovis ATCC 25840]
 gi|161619844|ref|YP_001593731.1| succinyl-CoA synthetase subunit beta [Brucella canis ATCC 23365]
 gi|163843949|ref|YP_001628353.1| succinyl-CoA synthetase subunit beta [Brucella suis ATCC 23445]
 gi|189024995|ref|YP_001935763.1| succinyl-CoA synthetase subunit beta [Brucella abortus S19]
 gi|225628126|ref|ZP_03786161.1| succinyl-CoA synthetase, beta subunit [Brucella ceti str. Cudo]
 gi|225853364|ref|YP_002733597.1| succinyl-CoA synthetase subunit beta [Brucella melitensis ATCC
           23457]
 gi|237816288|ref|ZP_04595281.1| succinyl-CoA synthetase, beta subunit [Brucella abortus str. 2308
           A]
 gi|254690069|ref|ZP_05153323.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|254694557|ref|ZP_05156385.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696182|ref|ZP_05158010.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700569|ref|ZP_05162397.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 5 str. 513]
 gi|254704939|ref|ZP_05166767.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 3 str. 686]
 gi|254708916|ref|ZP_05170727.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis B2/94]
 gi|254713657|ref|ZP_05175468.1| succinyl-CoA synthetase subunit beta [Brucella ceti M644/93/1]
 gi|254715989|ref|ZP_05177800.1| succinyl-CoA synthetase subunit beta [Brucella ceti M13/05/1]
 gi|254731100|ref|ZP_05189678.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|256030442|ref|ZP_05444056.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis
           M292/94/1]
 gi|256045532|ref|ZP_05448415.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059902|ref|ZP_05450088.1| succinyl-CoA synthetase subunit beta [Brucella neotomae 5K33]
 gi|256112259|ref|ZP_05453180.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 3
           str. Ether]
 gi|256158426|ref|ZP_05456324.1| succinyl-CoA synthetase subunit beta [Brucella ceti M490/95/1]
 gi|256253846|ref|ZP_05459382.1| succinyl-CoA synthetase subunit beta [Brucella ceti B1/94]
 gi|256258322|ref|ZP_05463858.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 9 str.
           C68]
 gi|256263152|ref|ZP_05465684.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 2
           str. 63/9]
 gi|256370328|ref|YP_003107839.1| succinyl-CoA synthetase subunit beta [Brucella microti CCM 4915]
 gi|260169352|ref|ZP_05756163.1| succinyl-CoA synthetase subunit beta [Brucella sp. F5/99]
 gi|260546046|ref|ZP_05821786.1| succinyl-CoA synthetase subunit beta [Brucella abortus NCTC 8038]
 gi|260562842|ref|ZP_05833328.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           16M]
 gi|260567585|ref|ZP_05838055.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 4 str. 40]
 gi|260755605|ref|ZP_05867953.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260758830|ref|ZP_05871178.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260760554|ref|ZP_05872897.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884631|ref|ZP_05896245.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|261214879|ref|ZP_05929160.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|261217755|ref|ZP_05932036.1| succinyl-CoA ligase subunit beta [Brucella ceti M13/05/1]
 gi|261220982|ref|ZP_05935263.1| succinyl-CoA ligase subunit beta [Brucella ceti B1/94]
 gi|261316413|ref|ZP_05955610.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis B2/94]
 gi|261321397|ref|ZP_05960594.1| succinyl-CoA ligase subunit beta [Brucella ceti M644/93/1]
 gi|261323872|ref|ZP_05963069.1| succinyl-CoA ligase subunit beta [Brucella neotomae 5K33]
 gi|261751075|ref|ZP_05994784.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261755637|ref|ZP_05999346.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 3 str. 686]
 gi|261758868|ref|ZP_06002577.1| succinyl-CoA ligase subunit beta [Brucella sp. F5/99]
 gi|265987484|ref|ZP_06100041.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|265991956|ref|ZP_06104513.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993688|ref|ZP_06106245.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996941|ref|ZP_06109498.1| succinyl-CoA ligase subunit beta [Brucella ceti M490/95/1]
 gi|294851169|ref|ZP_06791842.1| succinyl-CoA ligase subunit beta [Brucella sp. NVSL 07-0026]
 gi|297247167|ref|ZP_06930885.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 5 str.
           B3196]
 gi|54039643|sp|P66868|SUCC_BRUSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54042231|sp|P66867|SUCC_BRUME RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|75496187|sp|Q57AX2|SUCC_BRUAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046890|sp|A9M8R2|SUCC_BRUC2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046891|sp|A5VSQ3|SUCC_BRUO2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046892|sp|B0CIT0|SUCC_BRUSI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734927|sp|B2S880|SUCC_BRUA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778433|sp|C0RFH1|SUCC_BRUMB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|17982016|gb|AAL51320.1| succinyl-CoA synthetase beta chain [Brucella melitensis bv. 1 str.
           16M]
 gi|23348796|gb|AAN30818.1| succinyl-CoA synthetase, beta subunit [Brucella suis 1330]
 gi|62196912|gb|AAX75212.1| SucC, succinyl-CoA synthetase, beta subunit [Brucella abortus bv. 1
           str. 9-941]
 gi|148371231|gb|ABQ61210.1| succinyl-CoA synthetase, beta subunit [Brucella ovis ATCC 25840]
 gi|161336655|gb|ABX62960.1| succinyl-CoA synthetase, beta subunit [Brucella canis ATCC 23365]
 gi|163674672|gb|ABY38783.1| succinyl-CoA synthetase, beta subunit [Brucella suis ATCC 23445]
 gi|189020567|gb|ACD73289.1| succinyl-CoA synthetase subunit beta [Brucella abortus S19]
 gi|225616951|gb|EEH13998.1| succinyl-CoA synthetase, beta subunit [Brucella ceti str. Cudo]
 gi|225641729|gb|ACO01643.1| succinyl-CoA synthetase, beta subunit [Brucella melitensis ATCC
           23457]
 gi|237788355|gb|EEP62570.1| succinyl-CoA synthetase, beta subunit [Brucella abortus str. 2308
           A]
 gi|256000491|gb|ACU48890.1| succinyl-CoA synthetase subunit beta [Brucella microti CCM 4915]
 gi|260096153|gb|EEW80029.1| succinyl-CoA synthetase subunit beta [Brucella abortus NCTC 8038]
 gi|260152858|gb|EEW87950.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           16M]
 gi|260157103|gb|EEW92183.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 4 str. 40]
 gi|260669148|gb|EEX56088.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260670986|gb|EEX57807.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675713|gb|EEX62534.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260874159|gb|EEX81228.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|260916486|gb|EEX83347.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|260919566|gb|EEX86219.1| succinyl-CoA ligase subunit beta [Brucella ceti B1/94]
 gi|260922844|gb|EEX89412.1| succinyl-CoA ligase subunit beta [Brucella ceti M13/05/1]
 gi|261294087|gb|EEX97583.1| succinyl-CoA ligase subunit beta [Brucella ceti M644/93/1]
 gi|261295636|gb|EEX99132.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis B2/94]
 gi|261299852|gb|EEY03349.1| succinyl-CoA ligase subunit beta [Brucella neotomae 5K33]
 gi|261738852|gb|EEY26848.1| succinyl-CoA ligase subunit beta [Brucella sp. F5/99]
 gi|261740828|gb|EEY28754.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261745390|gb|EEY33316.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 3 str. 686]
 gi|262551409|gb|EEZ07399.1| succinyl-CoA ligase subunit beta [Brucella ceti M490/95/1]
 gi|262764669|gb|EEZ10590.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003022|gb|EEZ15315.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093057|gb|EEZ17207.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 2
           str. 63/9]
 gi|264659681|gb|EEZ29942.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|294819758|gb|EFG36757.1| succinyl-CoA ligase subunit beta [Brucella sp. NVSL 07-0026]
 gi|297174336|gb|EFH33683.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 5 str.
           B3196]
 gi|326409928|gb|ADZ66993.1| succinyl-CoA synthetase subunit beta [Brucella melitensis M28]
 gi|326539641|gb|ADZ87856.1| succinyl-CoA synthetase, beta subunit [Brucella melitensis M5-90]
          Length = 398

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 271/397 (68%), Positives = 334/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR+ G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 121 SILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDMSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|240851388|ref|YP_002972791.1| succinyl-CoA synthetase subunit beta [Bartonella grahamii as4aup]
 gi|240268511|gb|ACS52099.1| succinyl-CoA synthetase subunit beta [Bartonella grahamii as4aup]
          Length = 398

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 274/397 (69%), Positives = 333/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + SV  AE   + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAEKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G +AF+ ST+GGMDIE VA++ P+KIF L ID + GVTS D A LCD L+LQ
Sbjct: 121 SLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDAVEGVTSVDCARLCDALKLQ 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+GRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 SSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGRLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I ES LNVI A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIINESSLNVIPADNLDDAAQKIVAAVKG 397


>gi|254717987|ref|ZP_05179798.1| succinyl-CoA synthetase subunit beta [Brucella sp. 83/13]
 gi|265982931|ref|ZP_06095666.1| succinyl-CoA ligase subunit beta [Brucella sp. 83/13]
 gi|306839765|ref|ZP_07472566.1| succinyl-CoA synthetase, beta subunit [Brucella sp. NF 2653]
 gi|306842924|ref|ZP_07475560.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO2]
 gi|306843377|ref|ZP_07475978.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO1]
 gi|264661523|gb|EEZ31784.1| succinyl-CoA ligase subunit beta [Brucella sp. 83/13]
 gi|306276068|gb|EFM57768.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO1]
 gi|306286947|gb|EFM58467.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO2]
 gi|306405120|gb|EFM61398.1| succinyl-CoA synthetase, beta subunit [Brucella sp. NF 2653]
          Length = 398

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 271/397 (68%), Positives = 335/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR+ G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 121 SILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR DG  LFP LYKAF +KDMSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GEAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|83313057|ref|YP_423321.1| succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123540678|sp|Q2W063|SUCC_MAGMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|82947898|dbj|BAE52762.1| Succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 398

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 228/396 (57%), Positives = 292/396 (73%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L KY V V KG V  +   A    K L GP++VVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDLGGPVWVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P   KGGVRV  S++ V +++ ++LG  LITKQTGP G  V  VY+E G DI RELYL
Sbjct: 61  NDPNG-KGGVRVAKSVEEVKTNVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V  +AST+GGM+IEEVA ++P+KI K+ IDP+ G        +   L L+
Sbjct: 120 SMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGLGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LYKAF D D S++EINPL++   G L  LD+K++FDDNAL+RH DI+
Sbjct: 180 GKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED  E+EA +H+L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 ELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +I A +L DAA+K+V AVK
Sbjct: 360 GTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395


>gi|239826601|ref|YP_002949225.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. WCH70]
 gi|259511784|sp|C5D8V2|SUCC_GEOSW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|239806894|gb|ACS23959.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. WCH70]
          Length = 386

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 209/396 (52%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKELGSPVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     L   + + 
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F DKD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI+ A K+V +N+PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVEATKQVGLNLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+  A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNITAADSMADGAQKIVELVR 386


>gi|154244447|ref|YP_001415405.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
 gi|154158532|gb|ABS65748.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
          Length = 410

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 238/396 (60%), Positives = 305/396 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+++ VPV++G+   +   AE+A   L G  +VVK+QIHAGGRGKG+FK
Sbjct: 11  MNIHEYQAKALLKEFGVPVSRGLAAFTPQDAEAAAAKLGGIAFVVKAQIHAGGRGKGKFK 70

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPA++KGGVRV  +   V ++  E+LG+TL+T QTGP G +VN +Y+E+GA I +E YL
Sbjct: 71  ELPAEAKGGVRVVKTAADVKANAAEMLGNTLVTIQTGPDGKQVNRLYIEEGASIDKEFYL 130

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  VAF+ ST+GGMDIEEVA   P++I    +DP  GV       +   L L 
Sbjct: 131 SMLVDRATARVAFVVSTEGGMDIEEVAHATPERIVTFSVDPATGVQPLHGRKVAQALGLS 190

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+AF DKDMSLLEINPL++ ++ RL  LD+K+ FD NAL+RH ++ 
Sbjct: 191 GDLAKQAVALTANLYRAFTDKDMSLLEINPLVLTRDDRLVCLDAKVGFDSNALFRHPEVV 250

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD SEED +EIEA +++LSYIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 251 QLRDESEEDFKEIEASRYDLSYIALDGTIGCMVNGAGLAMATMDIIKLYGREPANFLDVG 310

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIMRCDV+ +G+++AV+++ +N+PLV+RL 
Sbjct: 311 GGATKEKVTAAFKIITADPNVEGILVNIFGGIMRCDVIAEGVIAAVRQMGLNVPLVVRLA 370

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I ESGLNVI A DLDDAAQKIV AVK
Sbjct: 371 GTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAAVK 406


>gi|300024733|ref|YP_003757344.1| succinyl-CoA synthetase subunit beta [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526554|gb|ADJ25023.1| succinyl-CoA synthetase, beta subunit [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 399

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 230/398 (57%), Positives = 287/398 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L R Y VP   G    SV  A  A K LPGP++VVK+QIHAGGRGKG+F 
Sbjct: 1   MNIHEYQAKELYRAYGVPTPNGFAAFSVAEAVEAAKKLPGPVWVVKAQIHAGGRGKGKFL 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V     ++LG TL+T QTG  G  VN +Y+EDG+ I RELYL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKEFAEQMLGKTLVTVQTGNAGRVVNRLYIEDGSAIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR++  VAFI S  GGM+IE+VA + P+KI  L IDP  G        +   L L+
Sbjct: 121 SALVDRSTSRVAFIVSQAGGMNIEDVAHETPEKIHTLTIDPATGYQPFHGRKVAFALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G L  NLY+   +KDMSLLEINPL++ K+G+L  LD K++FD NALYRH +I 
Sbjct: 181 GDQVKAAGKLVENLYRMVVEKDMSLLEINPLVVTKDGKLICLDGKMNFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED  EIEA +H+L+++ LDGNIGC+VNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLGEEDQTEIEASKHDLAFVKLDGNIGCLVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII +D SVKGIL+NIFGGIMRCD++ +G+++A +E+ I +PLV+RLE
Sbjct: 301 GGASKEKVREAFKIILADPSVKGILVNIFGGIMRCDIIAEGVIAAAREMDIKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD+G +++ ESGL +I A DL DAA+KI   +K V
Sbjct: 361 GTNVDLGKKILKESGLKIIPADDLADAAKKITDELKQV 398


>gi|23014368|ref|ZP_00054188.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 398

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 229/396 (57%), Positives = 291/396 (73%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L KY V V KG V  +   A    K L GP+YVVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDLGGPIYVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P   KGGVRV  S+  V +++ ++LG  LITKQTGP G  V  VY+E G DI RELYL
Sbjct: 61  NDPNG-KGGVRVVKSIDEVRANVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V  +AST+GGM+IEEVA ++P+KI K+ IDP+ G        +   L L+
Sbjct: 120 SMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRKIAFSLGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LYKAF D D S++EINPL++   G L  LD+K++FDDNAL+RH DI+
Sbjct: 180 GKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED  E+EA +H+L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 ELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +I A +L DAA+K+V AVK
Sbjct: 360 GTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395


>gi|85713704|ref|ZP_01044694.1| succinyl-CoA synthetase subunit beta [Nitrobacter sp. Nb-311A]
 gi|85699608|gb|EAQ37475.1| succinyl-CoA synthetase subunit beta [Nitrobacter sp. Nb-311A]
          Length = 399

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 246/398 (61%), Positives = 306/398 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR++ VPV++GV       AE+A  TL GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLREFGVPVSRGVPALKASEAEAAAHTLGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V     ++LG+TL+T QTGP G +VN +Y+E+G+DI +E YL
Sbjct: 61  ESAAGDKGGVRLARSIDEVKQFAGQMLGATLVTAQTGPAGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  ++F+ ST+GGM+IEEVA   P+KI    +DP+ GV      +    L L+
Sbjct: 121 SALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPVTGVMGHHGRTAAKALGLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM++LEINPL++ K G LRVLD+KISFD NALYRH ++ 
Sbjct: 181 GDLGKQAEKLVAQLYNAFIAKDMAMLEINPLVVTKQGELRVLDAKISFDSNALYRHSEVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EI+A +++LSY+ALDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 241 ALRDESEEDAKEIKASRYDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +VKGILINIFGGIM+CDV+  G+++AVK+V +N+PLV+RLE
Sbjct: 301 GGATKDKVAAAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD G ++I ESGLNV+ A DLDDAAQKIV AVKGV
Sbjct: 361 GTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKAVKGV 398


>gi|49474816|ref|YP_032858.1| succinyl-CoA synthetase subunit beta [Bartonella quintana str.
           Toulouse]
 gi|81646720|sp|Q6FYD1|SUCC_BARQU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49240320|emb|CAF26802.1| Succinyl-CoA synthetase beta chain [Bartonella quintana str.
           Toulouse]
          Length = 398

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 271/397 (68%), Positives = 331/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL +Y  P+A GV + S+  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  DSKGGVR+  S++ V+++++E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ S +GGMDIE VA++ P+KI  L +DP+ GVTS D   LCD LEL 
Sbjct: 121 SLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDALELH 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+G LRVLD+KISFD+NAL+RH DI 
Sbjct: 181 DNARKDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKISFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+Y+AL+G IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N++ G  +I++SGLNVI+A DLDDAAQKI+ AV+G
Sbjct: 361 GTNIEQGKAIISDSGLNVISASDLDDAAQKIIAAVRG 397


>gi|149202191|ref|ZP_01879164.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149144289|gb|EDM32320.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 397

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV++G V+     A++A   L GP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSEGRVVLRGEEAKTAAGALDGPVWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+     + + +LG TL+T QTGP G +VN +Y+E+G+ I RELYL
Sbjct: 61  EAGAGEKGGVRIAKSVNEAAEEAKRMLGRTLVTHQTGPEGKQVNRIYIENGSAIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L 
Sbjct: 121 ALLIDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFAVDPATGYMPYHGRRIAFALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  +G L VLD+K+ FD NA+YRH DI 
Sbjct: 181 GGQIKQCVSLMGLLYRAFVEKDMEMLEINPLIVTTDGNLMVLDAKLGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|295399796|ref|ZP_06809777.1| succinyl-CoA synthetase, beta subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111692|ref|YP_003990008.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y4.1MC1]
 gi|294978199|gb|EFG53796.1| succinyl-CoA synthetase, beta subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216793|gb|ADP75397.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y4.1MC1]
          Length = 386

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 207/396 (52%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKELGSPVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     L   + + 
Sbjct: 111 GFVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVNQAAKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIM+CDV+  GI+ A K+V +N+PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNIVAAESMADGAQKIVELVR 386


>gi|288959417|ref|YP_003449758.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
 gi|288911725|dbj|BAI73214.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
          Length = 398

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 225/396 (56%), Positives = 300/396 (75%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK+LL+KY V V +G V  +   AE+  + L GP++VVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQAKSLLKKYGVAVPRGGVAYTPQEAETVARELGGPVWVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   KGGVRV  S++ V  +  E+L   L+TKQTG  G  V  +YVE+GADI RELYL
Sbjct: 61  DNPEG-KGGVRVVKSIEDVGKNAAEMLNHVLVTKQTGAEGREVKRLYVEEGADIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR +G V  +AST+GGM+IEEVA + P+KI K+ +DP  G+       +   L L+
Sbjct: 120 GMLIDRATGRVTIMASTEGGMEIEEVAHNTPEKIIKVAVDPATGIQGYHTRKVAFALGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+            Y+AF D D +++EINPLI+  +G +  LD+K++FDDNAL+RH D++
Sbjct: 180 GKQVGAAAKFIQAAYQAFIDLDCAIVEINPLIVTGSGDILALDAKMNFDDNALFRHKDVE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED  EIEA +H+L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 ELRDEAEEDPAEIEAAKHSLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFK+I SDS+V+GIL+NIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVTAAFKLILSDSNVEGILVNIFGGIMRCDVIAEGVVAAAREVHLHVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGL +++A +L DAA+K+V AVK
Sbjct: 360 GTNVDLGKKILAESGLPILSADNLADAAEKVVKAVK 395


>gi|83950440|ref|ZP_00959173.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
 gi|83838339|gb|EAP77635.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
          Length = 397

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 232/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTGP G +VN +Y+EDG+ I +E YL
Sbjct: 61  EAGAGEAGGVRLAKSVEEAAEEAKRMLGRTLVTKQTGPAGKQVNRIYIEDGSGIEKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+AST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRVSFVASTEGGMDIEEVAESTPEKILSFSVDPATGYQPFHGRRIAFNLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F +KDM +LEINPLII   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GKQVKQCVSLMGTLYKMFLEKDMEMLEINPLIITDAGDLKCLDAKMGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  S ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKAVKG 397


>gi|138894729|ref|YP_001125182.1| succinyl-CoA synthetase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247652|ref|ZP_03146354.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. G11MC16]
 gi|166979701|sp|A4IM83|SUCC_GEOTN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|134266242|gb|ABO66437.1| Succinyl-CoA synthase, beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212436|gb|EDY07193.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. G11MC16]
          Length = 386

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 206/396 (52%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKALGTSVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  +DP +G+ +     L   + + 
Sbjct: 111 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F DKD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI++A K+V + +PLV+RLE
Sbjct: 291 GGASEEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+  A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKILQESGLNITAAESMADGAQKIVELVR 386


>gi|259415170|ref|ZP_05739092.1| succinyl-CoA synthetase beta chain [Silicibacter sp. TrichCH4B]
 gi|259349080|gb|EEW60834.1| succinyl-CoA synthetase beta chain [Silicibacter sp. TrichCH4B]
          Length = 397

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL  Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLSSYGAPVSDGRVVLKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRVTSRVSFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQPYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF DKDM +LEINPLI+   G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYQAFIDKDMEMLEINPLIVTDTGDLKVLDAKLGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAADDLSDGAQKIVKAVKG 397


>gi|212639579|ref|YP_002316099.1| succinyl-CoA synthetase subunit beta [Anoxybacillus flavithermus
           WK1]
 gi|212561059|gb|ACJ34114.1| Succinyl-CoA synthetase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 401

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 204/395 (51%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 16  MNIHEYQGKEILRSYGVSVPNGRVAFTVEEAVEAAKELGSSVCVVKAQIHAGGRGKA--- 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   E+LG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 73  -------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYI 125

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  + S +GG +IEEVA   P+KIFK  IDP +G+ +     +   + + 
Sbjct: 126 GLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRMAFNINIP 185

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL++  +G++  LD+K++FD NALYRH DI 
Sbjct: 186 KELVNQAVKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 245

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +E+EA +++L+YI+LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 246 EYRDLDEEDPKEVEASKYDLNYISLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 305

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  GI+ A K+V +N+PLV+RLE
Sbjct: 306 GGATTEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 365

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN+  A  + D AQKIV  V
Sbjct: 366 GTNVELGKKILEESGLNITAAESMADGAQKIVSLV 400


>gi|84515874|ref|ZP_01003235.1| succinyl-CoA synthetase subunit beta [Loktanella vestfoldensis
           SKA53]
 gi|84510316|gb|EAQ06772.1| succinyl-CoA synthetase subunit beta [Loktanella vestfoldensis
           SKA53]
          Length = 397

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 233/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  ++    A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRPVTRAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EADAGDKGGVRLCRSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L 
Sbjct: 121 ALLVDRQTSRISFVVSTEGGMDIEEVAAATPEKILSFSVDPATGYQAFHGRRVAFTLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GNQIKQCVTLMGQLYKAFTEKDMEMLEINPLIVTDKGDLKVLDAKVSFDGNAMYRHGDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIIRNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|16124592|ref|NP_419156.1| succinyl-CoA synthetase subunit beta [Caulobacter crescentus CB15]
 gi|221233279|ref|YP_002515715.1| succinyl-CoA synthetase subunit beta [Caulobacter crescentus
           NA1000]
 gi|21264045|sp|Q9AB94|SUCC_CAUCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778434|sp|B8GYZ1|SUCC_CAUCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|13421486|gb|AAK22324.1| succinyl-CoA synthetase, beta subunit [Caulobacter crescentus CB15]
 gi|220962451|gb|ACL93807.1| succinyl-CoA synthetase beta chain [Caulobacter crescentus NA1000]
          Length = 399

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 237/397 (59%), Positives = 301/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++  PV +G    +   A +A + L GP++VVKSQIHAGGRGKG+F+
Sbjct: 1   MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S++ V S+  E+LG  L+T QTGP G +VN +Y+E+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  V+ +AST+GGMDIE+VA   P+KI    IDP  GV      +L   L L 
Sbjct: 121 SLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDM++LEINPLI+  +  LRVLD+K+SFD N+L+RH DI+
Sbjct: 181 GGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFRHPDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I+ESGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKKIISESGLNVIAANDLSDGAEKIVAAVKG 397


>gi|254466420|ref|ZP_05079831.1| succinyl-CoA synthetase, beta subunit [Rhodobacterales bacterium
           Y4I]
 gi|206687328|gb|EDZ47810.1| succinyl-CoA synthetase, beta subunit [Rhodobacterales bacterium
           Y4I]
          Length = 397

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I RELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQPYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       L   LYKAF +KDM +LEINPLII  +G L+VLD+K+ FD NA+YRH D+ 
Sbjct: 181 GQQVKQCVKLMGQLYKAFVEKDMEMLEINPLIIADDGNLKVLDAKVGFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKAVKG 397


>gi|163744276|ref|ZP_02151636.1| succinyl-CoA synthase, beta subunit [Oceanibulbus indolifex HEL-45]
 gi|161381094|gb|EDQ05503.1| succinyl-CoA synthase, beta subunit [Oceanibulbus indolifex HEL-45]
          Length = 397

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+DI RELYL
Sbjct: 61  EAGAGEKGGVRLTKSVEEAAEEAKKMLGKTLVTHQTGPAGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVADATPEKILSFSVDPATGYQPFHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      L   LY+AF +KDM +LEINPLI+M    L+VLD+K+SFD NA+YR  D+ 
Sbjct: 181 GTAVKQCVKLMGQLYQAFIEKDMEMLEINPLIVMPGNDLKVLDAKVSFDGNAMYRQPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 NLRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDENVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|85704793|ref|ZP_01035894.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
 gi|85670611|gb|EAQ25471.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
          Length = 397

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 233/397 (58%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAASALDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTG  G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EAGAGEAGGVRLARSVEEAAEEAKRMLGRTLVTKQTGAAGKQVNRIYIEDGSGIQTEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAEKTPEKILSFSVDPATGYQPFHGRRIAFNLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYK F +KDM +LEINPLI+   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GGQIKQCVALMGTLYKLFVEKDMEMLEINPLIVSDKGDLKCLDAKMGFDSNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|149201198|ref|ZP_01878173.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149145531|gb|EDM33557.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 397

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 291/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGALDGPIWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + + +LG TL+TKQTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EAGAGEAGGVRLARSVEDAAEEAKCMLGRTLVTKQTGPAGKQVNRIYIEDGSGIQTEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAEKTPEKILSFSVDPATGYQPFHGRRIAFNLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       +L   LYK F DKDM +LEINPLI+   G L+ LD+K+ FD NA+YRH DI 
Sbjct: 181 GGQVKQCVNLMGILYKLFLDKDMEMLEINPLIVSDKGDLKCLDAKMGFDSNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|144898023|emb|CAM74887.1| Succinyl-CoA synthetase beta chain [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 398

 Score =  504 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 222/396 (56%), Positives = 287/396 (72%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L KY V V KG V  +   A    K L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAIQVAKDLGGPVWVVKSQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGVRV  S++ V +    +LG  L+T QTG  G  V  +YVE G DI RELYL
Sbjct: 61  GDTSG-KGGVRVVKSVEEVGAAADAMLGKVLVTVQTGEQGKEVKRIYVEQGCDIRRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            LL+DR++  V  +AST+GGM+IEEVA   P+KI K+ IDP+ G        L   L L 
Sbjct: 120 GLLIDRSTSRVTIMASTEGGMEIEEVAHKSPEKILKVAIDPVQGFQQYHGRQLAFGLGLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LYKAF D D S++EINPL++  + +L  LD+K++FDDNAL+RH DI+
Sbjct: 180 GKQVGAAVKFMGALYKAFMDLDCSIVEINPLVVTGDDQLIALDAKVNFDDNALFRHKDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD SEED  E+EA +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 240 EMRDESEEDPAELEAARHSLNYIKLDGSIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +N+PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +I A +L DAA+K+V AVK
Sbjct: 360 GTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395


>gi|254488451|ref|ZP_05101656.1| succinyl-CoA synthase, beta subunit [Roseobacter sp. GAI101]
 gi|214045320|gb|EEB85958.1| succinyl-CoA synthase, beta subunit [Roseobacter sp. GAI101]
          Length = 397

 Score =  504 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 239/397 (60%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKNAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTARVGFVCSTEGGMDIEEVAESTPEKIISFSVDPATGFQPFHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYKAF DKDM +LEINPLI+  +G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GKQVKQCVTLMGQLYKAFTDKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNAMYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEQGKEIIKNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|295691153|ref|YP_003594846.1| succinyl-CoA synthetase subunit beta [Caulobacter segnis ATCC
           21756]
 gi|295433056|gb|ADG12228.1| succinyl-CoA synthetase, beta subunit [Caulobacter segnis ATCC
           21756]
          Length = 399

 Score =  504 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 301/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++  PV +G    +   A +A + L GP++VVKSQIHAGGRGKG+F+
Sbjct: 1   MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S++ V ++  E+LG  L+T QTGP G +VN +Y+E+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVEEVKTNAAEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  V+ +AST+GGMDIE+VA   P+KI    IDP  GV      +L   L L 
Sbjct: 121 SLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHQRALAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDM++LEINPLI+  +  LRVLD+K+SFD N+L+RH DI+
Sbjct: 181 GGLAKEAASLLTQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFRHPDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I+ESGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKKIISESGLNVIAANDLSDGAEKIVAAVKG 397


>gi|83944440|ref|ZP_00956894.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. EE-36]
 gi|83844763|gb|EAP82646.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. EE-36]
          Length = 397

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGDKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRIGFVCSTEGGMDIEEVAESTPEKIISFSVDPAAGFQPYHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   L+KAF +KDM +LEINPLI+  +G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GKQVKQCVTLMGQLFKAFVEKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNAMYRHGDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 DLRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|319409452|emb|CBI83101.1| succinyl-CoA synthetase, beta chain [Bartonella schoenbuchensis R1]
          Length = 398

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 270/396 (68%), Positives = 327/396 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L +Y  P+A GV + SV  AE   K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRILHEYGAPIANGVAVYSVEQAEKWAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++++E+LG TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAQSVEEVVANVKEMLGKTLVTKQTGAEGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G V F+ ST+GGMDIE VA++ P+KI  L I+   GVTS D   LCD L+L+
Sbjct: 121 SLLVDRTVGQVVFVVSTEGGMDIETVAEETPEKILTLPIESAKGVTSVDCTKLCDALDLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR DG  LFP LYKAFC+KDMSLLEINPLI+MK+G LRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 DSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDISEEDPKEIEASKHDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV +AFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVK+V + +PLV+RLE
Sbjct: 301 GGASKEKVTSAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKDVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI+A DLDDAAQKIV AVK
Sbjct: 361 GTNVERGKEIIDNSGLNVISADDLDDAAQKIVTAVK 396


>gi|158425639|ref|YP_001526931.1| succinyl-CoA synthetase beta subunit [Azorhizobium caulinodans ORS
           571]
 gi|158332528|dbj|BAF90013.1| succinyl-CoA synthetase beta subunit [Azorhizobium caulinodans ORS
           571]
          Length = 400

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 240/396 (60%), Positives = 309/396 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PV++GV + +V  AE+A + L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKTYGAPVSRGVPVLAVGEAEAAARELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++ V + + ++LG+TL+T QTGP G +VN +Y+E+G+DI  E YL
Sbjct: 61  EPEAGDKGGVRLARSVEEVKTFVEQMLGNTLVTVQTGPAGKQVNRLYIEEGSDIETEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR++  V+F+ ST+GGMDIEEVA   P+KI    +DP  G+ +     + D L L 
Sbjct: 121 SLLVDRSTSRVSFVVSTEGGMDIEEVAHSTPEKIVSFSVDPASGIQAFHGRKVADALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G L   LY AF D DM++LEINPLI+ K+ +L+VLD+K++FD NAL+RH D+ 
Sbjct: 181 GDLAKQAGKLTEVLYTAFTDTDMAMLEINPLIVTKDAKLKVLDAKVTFDSNALFRHPDLL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIM+CDV+ +G+L+AV  V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITSDPNVKGILVNIFGGIMKCDVIARGVLAAVTAVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I +SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEQGKQIIRDSGLNVIPADDLDDAAQKIVAAVK 396


>gi|146337550|ref|YP_001202598.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. ORS278]
 gi|189046889|sp|A4YKC6|SUCC_BRASO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146190356|emb|CAL74352.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS278]
          Length = 398

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 240/397 (60%), Positives = 313/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL ++ VP++KGV +     A++A KTL GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLHEFGVPISKGVPVLRPEDADAAAKTLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +  R++LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVNTFARQMLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ ST+GG++IE+VA + P+KI    +DP  GV      ++   L+L 
Sbjct: 121 SLLVDRETSKVAFVVSTEGGVNIEDVAHETPEKIVTFSVDPATGVMGHHGRAVAKALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM++LEINPL++ K G+LRVLD+K+SFD NAL++H ++ 
Sbjct: 181 GDLAKQAEKLTTQLYNAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNALFKHPEVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGMEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I+ESGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397


>gi|86747406|ref|YP_483902.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           HaA2]
 gi|123409066|sp|Q2J3G9|SUCC_RHOP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|86570434|gb|ABD04991.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 398

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 304/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV+ G  I     AE+A   L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVPVSHGYPIFKASEAEAAATKLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +   ++L +TL+T QTGP G +VN +Y+E+G++I +E YL
Sbjct: 61  EASAGDKGGVRLAKSVDEVKTYAEQMLHATLVTVQTGPAGKQVNRLYIEEGSEIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA D P+KI    +DP  G+ S    ++ + L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPATGIMSHHGRAVANALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM +LEINPL++ K G L+ LD+K+SFD N+LYRH DIQ
Sbjct: 181 GDQAKQAESLVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNSLYRHADIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 GLRDESEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CD++ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV+AVKG
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVNAVKG 397


>gi|83953481|ref|ZP_00962203.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. NAS-14.1]
 gi|83842449|gb|EAP81617.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. NAS-14.1]
          Length = 397

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 294/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEEAKTAAGEMDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGDKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA+  P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQTSRIGFVCSTEGGMDIEEVAESTPEKIISFSVDPAAGFQPYHGRRVAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   L+KAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GKQVKQCVTLMGQLFKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAMYRHGDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 DLRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|288960089|ref|YP_003450429.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
 gi|288912397|dbj|BAI73885.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
          Length = 399

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 229/396 (57%), Positives = 295/396 (74%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y V V +G V  +   A S  + L GP++VVKSQIHAGGRG GRF+
Sbjct: 1   MNIHEYQAKNLLRGYGVAVPRGGVAFTPEEAASVARELGGPVWVVKSQIHAGGRGAGRFQ 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   KGGVRV  S++ V S+  E+L   L+TKQTGP G  V  +YVE+GADI RELYL
Sbjct: 61  DNPGG-KGGVRVVKSVEEVSSNAAEMLNHVLVTKQTGPAGKEVKRLYVEEGADIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            LL DR +G V  IAST+GGM+IEEVA + P+KI K+ IDP  G+       +   L L+
Sbjct: 120 GLLTDRATGRVTIIASTEGGMEIEEVAHNTPEKIVKVAIDPATGIQGHHTRKVAFALGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+            YKAF + D +++EINPLI+  +G +  LD+K+SFDDNAL+RH D+ 
Sbjct: 180 GKQVASAAKFIQAAYKAFTELDCAIVEINPLIVTGSGDILALDAKMSFDDNALFRHKDVA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 ALRDEAEEDPAEIEAAKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFK+I SDS+V+GIL+NIFGGIMRCDV+ +G+++A ++VK+++PLV+RLE
Sbjct: 300 GGATKERVTAAFKLILSDSAVEGILVNIFGGIMRCDVIAEGVVAAARDVKLHVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV +G R++A+SGL +++A +LDDAA+KIV AVK
Sbjct: 360 GTNVALGKRILADSGLPILSADNLDDAAKKIVAAVK 395


>gi|86138986|ref|ZP_01057557.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. MED193]
 gi|85824217|gb|EAQ44421.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. MED193]
          Length = 397

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 231/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEASEEAKKMLGRTLVTHQTGPVGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQAYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  +G ++VLD+K+SFD NA+YRH D+ 
Sbjct: 181 GAQIKQCVKLMGQLYQAFVEKDMEMLEINPLIVSDSGDIKVLDAKVSFDGNAIYRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|56695262|ref|YP_165610.1| succinyl-CoA synthetase subunit beta [Ruegeria pomeroyi DSS-3]
 gi|56676999|gb|AAV93665.1| succinyl-CoA synthase, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 397

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I RELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPVGKQVNRIYIEAGSGIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP+ G        +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPVTGYQPYHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+ + G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GPQVKQCVALMGLLYKAFVEKDMEMLEINPLIVAEGGSLKVLDAKVGFDGNAIYRHSDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397


>gi|94313284|ref|YP_586493.1| succinyl-CoA synthetase subunit beta [Cupriavidus metallidurans
           CH34]
 gi|93357136|gb|ABF11224.1| succinyl-CoA synthetase, beta subunit [Cupriavidus metallidurans
           CH34]
          Length = 403

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 214/396 (54%), Positives = 288/396 (72%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR+Y+V V  G V  +   A  A + L GP++VVKSQIHAGGRG GRF 
Sbjct: 1   MNIHEYQAKELLRRYDVAVPNGCVAFTPEEAAQAARKLGGPIWVVKSQIHAGGRGAGRFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P+  KGGVRV  S+  V ++  ++LG+TL+TKQTGP G  V  +Y+E+G DI RELYL
Sbjct: 61  GDPSG-KGGVRVVKSIDEVQANASQMLGATLVTKQTGPAGREVRRLYIEEGCDIARELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR +  +  +AST+GGM+IEEVA   P+KI K+ IDP  G+       L   L L 
Sbjct: 120 GMLIDRATSRITVMASTEGGMEIEEVAAHTPEKILKVAIDPASGIQPFHARRLAFGLGLS 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          + Y+AF + D S++EINPL++  +G +  LD+K +FDDNAL+RH DI+
Sbjct: 180 GKQVAAATRFILSAYRAFTELDASIVEINPLVVTGSGDVIALDAKFNFDDNALFRHPDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD SEED  E EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 AMRDESEEDPAETEAARHALNYVRLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAF++I +D  V+GIL+NIFGGIMRCDV+ +G+++A ++V + +PLV+RLE
Sbjct: 300 GGATKERVTAAFRLILADPKVEGILVNIFGGIMRCDVIAEGVIAAARDVDLTVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++ +SGL +++A  L DAA+K+V AV+
Sbjct: 360 GTNVELGKTILRDSGLPILSANHLADAAEKVVAAVR 395


>gi|254511388|ref|ZP_05123455.1| succinyl-CoA synthetase, beta subunit [Rhodobacteraceae bacterium
           KLH11]
 gi|221535099|gb|EEE38087.1| succinyl-CoA synthetase, beta subunit [Rhodobacteraceae bacterium
           KLH11]
          Length = 397

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 232/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRAVLRAEEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E+ A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  E+YL
Sbjct: 61  EIDAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPEGKQVNRIYIEAGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L LQ
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKILSFSVDPATGYQAYHGRRIAFALGLQ 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPL++   G L+VLD+KI FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYKAFIEKDMEMLEINPLVVSDRGDLKVLDAKIGFDGNAVYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKAVKG 397


>gi|170747353|ref|YP_001753613.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653875|gb|ACB22930.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 398

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 241/397 (60%), Positives = 300/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I +   AE+A K L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVAIFNPSEAEAAAKELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P  +KGGVRV  S+  V     E+LG TL+T QTGP G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPEGAKGGVRVTKSIDEVKQFAGEMLGQTLVTIQTGPAGKQVNRLYIEEGAQIAEEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE VA D P+KI  + +DP  GV      ++   L L 
Sbjct: 121 SMLVDRATGGVAFVVSTEGGMDIEAVAHDTPEKIHTIAVDPATGVMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDMSLLEINPL++  +G L+ LD+K++FD NALYRH DI 
Sbjct: 181 GAQAKEAAALTEKLYAAFVAKDMSLLEINPLVLTADGHLKCLDAKMAFDSNALYRHADIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEQGKAIIRNSGLNVIPADDLDDAAQKIVAAVKG 397


>gi|332976753|gb|EGK13584.1| succinyl-CoA ligase subunit beta [Desmospora sp. 8437]
          Length = 386

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 203/396 (51%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +L++Y V V +G V  +   A  A K L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNVHEYQGKEILKQYGVVVPRGHVAFTPDEAVDAAKQLGGDLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     E+LG TL+T QTGP G  V  + +E+G  I +E Y+
Sbjct: 58  -------GGVKLAKSLDEVKQYAEELLGKTLVTHQTGPEGKEVKRLLIEEGCKIEKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR++  V  +AS++GG +IEEVA + P+KI K+++DP +G+       L   + + 
Sbjct: 111 GVVIDRSTDRVTMMASSEGGTEIEEVAANTPEKIVKVVVDPAVGLQPFQARKLAFAIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+AF +KD SL EINPLI   +G++  LD+K++FD NALYRH ++ 
Sbjct: 171 KNLVNKAVKFMMGLYQAFVEKDGSLAEINPLITTTDGQVMALDAKLNFDSNALYRHPEVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +EIEA + +L+YIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDFSEEDPKEIEASKFDLTYIALDGNIGCMVNGAGLAMATMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D  V+GIL+NIFGGIM+CDV+ +G++ A K++ ++ PLV+RLE
Sbjct: 291 GGATTEKVTAAFKIILEDPQVQGILVNIFGGIMKCDVIAEGVVEAAKQIGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGL +  A  + DAA+KIV  VK
Sbjct: 351 GTNVDLGKKILNESGLKITAADSMADAAEKIVSLVK 386


>gi|163741828|ref|ZP_02149218.1| succinyl-CoA synthetase subunit beta [Phaeobacter gallaeciensis
           2.10]
 gi|161385001|gb|EDQ09380.1| succinyl-CoA synthetase subunit beta [Phaeobacter gallaeciensis
           2.10]
          Length = 397

 Score =  501 bits (1290), Expect = e-140,   Method: Composition-based stats.
 Identities = 233/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQAFHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF DKDM +LEINPLI+  +G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GGQVKQCVKLMGQLYQAFVDKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNAVYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|154244112|ref|YP_001415070.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
 gi|154158197|gb|ABS65413.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
           Py2]
          Length = 400

 Score =  501 bits (1290), Expect = e-140,   Method: Composition-based stats.
 Identities = 244/396 (61%), Positives = 312/396 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+KY  PV++GV +  V  AE+A K L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKKYGAPVSRGVPVLKVEDAEAAAKELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V + + ++LG+TL+T QTGP G +VN +Y+EDG+DI +E Y+
Sbjct: 61  EPEAGDKGGVRLAKSIDEVKTFVSQMLGNTLVTIQTGPAGKQVNRLYLEDGSDIEKEFYI 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ ST+GGMDIEEVA  +P+KI    +DP+ GV       +   L L 
Sbjct: 121 SLLVDRATSHVAFVVSTEGGMDIEEVAHSHPEKIVTFSVDPVTGVQGFHGRKIAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G L   LY AF D DM++LEINPLII K+ +LRVLD+K++FD NA++RH ++ 
Sbjct: 181 GDLAKQAGKLAEVLYTAFVDTDMAMLEINPLIITKDAQLRVLDAKVTFDSNAMFRHPELA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DII+LYG +PANFLDVG
Sbjct: 241 ELRDLTEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIQLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+L+AVK V + +PLV+RLE
Sbjct: 301 GGANEEKVTAAFKIITADPNVKGILVNIFGGIMQCDVIARGVLAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I ESGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAAVK 396


>gi|83944771|ref|ZP_00957137.1| succinyl-CoA synthetase subunit beta [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851553|gb|EAP89408.1| succinyl-CoA synthetase subunit beta [Oceanicaulis alexandrii
           HTCC2633]
          Length = 398

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 264/396 (66%), Positives = 331/396 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKALL+ Y  PVA+GV + SV  A  A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKALLKSYGAPVAEGVAVFSVEEASKAADQLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S + V  + +E+LG+TL+T QTGP G +VN +Y+EDGADI  ELYL
Sbjct: 61  ELPADAKGGVRLAFSKEDVAKNAKEMLGNTLVTHQTGPEGKQVNRLYIEDGADISTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLV+R +G VAF+ ST+GGMDIE+VA++ P+KI  + IDP  GVT++D + +   LEL+
Sbjct: 121 SLLVNRETGQVAFVVSTEGGMDIEQVAEETPEKILTVNIDPTTGVTADDASRIAKALELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR D   L P LYKAF +KDMSLLEINPLI+M+NGRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GQARDDMLSLAPILYKAFTEKDMSLLEINPLIVMENGRLRVLDAKVSFDGNALFRHDDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+YIALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDDKEIEASKYDLAYIALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGL++ +A DLDDAA+KI  AVK
Sbjct: 361 GTNVDLGKKILNESGLDITSADDLDDAAKKITAAVK 396


>gi|148252001|ref|YP_001236586.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. BTAi1]
 gi|189046888|sp|A5E936|SUCC_BRASB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146404174|gb|ABQ32680.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bradyrhizobium
           sp. BTAi1]
          Length = 398

 Score =  501 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 237/397 (59%), Positives = 311/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL ++ VP++KGV +     +++A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLHEFGVPISKGVPVLRPEDSDAAAKALGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +  +++LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVNAFAKQMLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ ST+GG++IE+VA   P+KI    +DP  GV      ++   L+L 
Sbjct: 121 SLLVDRETSKVAFVVSTEGGVNIEDVAHSTPEKIITFSVDPATGVMPHHGRAVAKALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM++LEINPL++ K G+LRVLD+K+SFD NAL++H ++ 
Sbjct: 181 GDLAKQAEKLTIQLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNALFKHPEVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGMEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I+ESGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397


>gi|85709717|ref|ZP_01040782.1| succinyl-CoA synthetase subunit beta [Erythrobacter sp. NAP1]
 gi|85688427|gb|EAQ28431.1| succinyl-CoA synthetase subunit beta [Erythrobacter sp. NAP1]
          Length = 399

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 229/396 (57%), Positives = 290/396 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+++ + V  G    SV  A +A K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNVHEYQAKELLKEHGIAVPDGHAALSVEEAVAAAKKLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELP D+KGGVR+  S++ V ++ +E+LG+TL+T QTG  G +VN +YV DG DI +E Y 
Sbjct: 61  ELPEDAKGGVRLAKSIEEVEANAKEMLGNTLVTVQTGAEGKQVNRLYVTDGVDIAKEYYF 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG VA + ST+GGMDIE VA D P+KI  + IDP  G       ++   L+L 
Sbjct: 121 SLLVDRASGQVAMVVSTEGGMDIEAVAHDTPEKITTITIDPAQGFMPHHGRAVAFGLKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF   D  +LEINPL+  ++G+L VLD+K+SFD NAL+RH DI+
Sbjct: 181 GDLNKQAQKLAKKLYDAFMATDSEMLEINPLVETEDGQLLVLDAKMSFDGNALFRHPDIE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 AMRDETEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +V+GIL+NIFGGIMRCD + +GI+ A KEV +++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVIAAKEVDLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVEKGKEILANSGLPIVPADDLGDAAKKIVAEVK 396


>gi|254436507|ref|ZP_05050001.1| succinyl-CoA synthetase, beta subunit subfamily [Octadecabacter
           antarcticus 307]
 gi|198251953|gb|EDY76267.1| succinyl-CoA synthetase, beta subunit subfamily [Octadecabacter
           antarcticus 307]
          Length = 397

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL  Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLASYGAPVSDGRAVLKAEDAKTAASELDGPLWVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S+     + +++LG TL+T QTGP G +VN VY+EDGADI  E YL
Sbjct: 61  EAGAGEAGGVRLTKSVGEAADEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGADIESEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRIGFVVSTEGGMDIEEVAANTPEKIINFTVDPATGYQAFHGRRVAFTLGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ      +L   LYKAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GQQVKQCVNLMGLLYKAFVEKDMEMLEINPLIVTNAGDLKVLDAKVSFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  +I  SGL+VI A DL D A+KIV AVKG
Sbjct: 361 GTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKAVKG 397


>gi|254476607|ref|ZP_05089993.1| succinyl-CoA synthetase, beta subunit [Ruegeria sp. R11]
 gi|214030850|gb|EEB71685.1| succinyl-CoA synthetase, beta subunit [Ruegeria sp. R11]
          Length = 397

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA+  P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLII  +G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVQLMGQLYKAFVEKDMEMLEINPLIIADDGNLKVLDAKVGFDGNAVYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKDIINNSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|99078490|ref|YP_611748.1| succinyl-CoA synthetase subunit beta [Ruegeria sp. TM1040]
 gi|99035628|gb|ABF62486.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ruegeria sp.
           TM1040]
          Length = 397

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 295/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVMKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRVTSRVSFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQAYHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+  NG L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GAQVKQCVKLMGQLYQAFIEKDMEMLEINPLIVADNGDLKVLDAKVGFDGNAIYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAADDLSDGAEKIVKAVKG 397


>gi|154251905|ref|YP_001412729.1| succinyl-CoA synthetase subunit beta [Parvibaculum lavamentivorans
           DS-1]
 gi|189081764|sp|A7HT39|SUCC_PARL1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|154155855|gb|ABS63072.1| succinyl-CoA synthetase, beta subunit [Parvibaculum lavamentivorans
           DS-1]
          Length = 389

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 230/396 (58%), Positives = 290/396 (73%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L KY VPV  G    +   A +  K L GP++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKAVLAKYGVPVPSGHAAFTPEEAVAKAKELGGPVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V  +   ++GSTL+T QTGP G  VN +Y+EDG+ I RELYL
Sbjct: 58  -------GGVKVVKSLDDVKKEATRLIGSTLVTHQTGPDGKEVNRLYIEDGSSISRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V+FI ST+GGMDIEEVAK  P+KI    +DP  G++      +   L L+
Sbjct: 111 SILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFSVDPASGISGFHGRKVAYALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L   LYKAF  +DMS+LEINPL++   G L  LD+K++FD NALYRH DI 
Sbjct: 171 GDQVKQGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLLCLDAKVNFDSNALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+EA +++L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLTEEDPAEVEASKYDLNYIKLDGKIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD SV+GIL+NIFGGIMRCD++ +G+++A KEV +++PLV+RLE
Sbjct: 291 GGATKEKVTAAFKIILSDPSVEGILVNIFGGIMRCDIIAEGVIAAAKEVSLSVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGL +I+A +L DAA+KIV AVK
Sbjct: 351 GTNVDLGKKIMAESGLPIISADNLADAAEKIVKAVK 386


>gi|163738928|ref|ZP_02146341.1| succinyl-CoA synthetase subunit beta [Phaeobacter gallaeciensis
           BS107]
 gi|161387733|gb|EDQ12089.1| succinyl-CoA ligase [ADP-forming] subunit beta [Phaeobacter
           gallaeciensis BS107]
          Length = 397

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA+  P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       L   LYKAF +KDM +LEINPLI+  +G L+VLD+K+ FD NA+YRH DI 
Sbjct: 181 GQQIKQCVRLMGQLYKAFVEKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNAVYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A +L D A+KIV AVKG
Sbjct: 361 GTNVEAGKDIINTSGLDVIAADNLSDGAEKIVKAVKG 397


>gi|126730338|ref|ZP_01746149.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
 gi|126709071|gb|EBA08126.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
          Length = 397

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 236/397 (59%), Positives = 298/397 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLRAEEAKTAAGALDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+DI RELYL
Sbjct: 61  EADAGEKGGVRLAKSVEEAAEEAKKMLGKTLVTHQTGPAGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPFHGRRIAFALGLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     L   LYKAF +KDM +LEINPLI++K+G L+VLD+K+ FD NALYR  ++ 
Sbjct: 181 KAGQKHCVKLMGILYKAFVEKDMEMLEINPLIVLKDGTLKVLDAKLGFDGNALYRQAEVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EEDS+E++A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDETEEDSKELQASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIAADDLKDGAEKIVKAVKG 397


>gi|194014747|ref|ZP_03053364.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Bacillus pumilus ATCC 7061]
 gi|194013773|gb|EDW23338.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Bacillus pumilus ATCC 7061]
          Length = 386

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +   A  A + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEELESSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP IG+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          +LY AF +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 TKLVGQAVKFMTSLYNAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++++SGLN+ +A  + D A+KIV  VK
Sbjct: 351 GTNVELGKKILSDSGLNITSAESMADGAEKIVSLVK 386


>gi|126740514|ref|ZP_01756201.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
 gi|126718315|gb|EBA15030.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
          Length = 397

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 232/397 (58%), Positives = 292/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+E G+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQSELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G        +   L L 
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAETPEKILSFSVDPATGYQPYHGRRVAFSLGLA 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF DKDM +LEINPLII  +G L+VLD+K+ FD NA+YRH D+ 
Sbjct: 181 GAQVKQCVKLMGQLYQAFVDKDMEMLEINPLIIADDGNLKVLDAKVGFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  S ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEAGKDIINNSDVDVIAADDLSDGAEKIVKAVKG 397


>gi|52080211|ref|YP_079002.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis ATCC
           14580]
 gi|52785588|ref|YP_091417.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis ATCC
           14580]
 gi|319646010|ref|ZP_08000240.1| succinyl-CoA ligase subunit beta [Bacillus sp. BT1B_CT2]
 gi|81385581|sp|Q65JP0|SUCC_BACLD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52003422|gb|AAU23364.1| succinyl-CoA synthetase (beta subunit) [Bacillus licheniformis ATCC
           14580]
 gi|52348090|gb|AAU40724.1| SucC [Bacillus licheniformis ATCC 14580]
 gi|317391760|gb|EFV72557.1| succinyl-CoA ligase subunit beta [Bacillus sp. BT1B_CT2]
          Length = 386

 Score =  499 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A  A + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVAVPEGKVAFTADEAVKAAEALSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +   E+LG TL+T QTGP G ++  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+ S     +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ +SGLN+ +A  + D AQKIV  VK
Sbjct: 351 GTNVDLGKKILDDSGLNITSAESMADGAQKIVSLVK 386


>gi|157692288|ref|YP_001486750.1| succinyl-CoA synthetase subunit beta [Bacillus pumilus SAFR-032]
 gi|189046884|sp|A8FD73|SUCC_BACP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157681046|gb|ABV62190.1| succinate--CoA ligase (ADP-forming) beta subunit [Bacillus pumilus
           SAFR-032]
          Length = 386

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +   A  A + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEELESSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP IG+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          +LY AF +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 TKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++++SGLN+ +A  + D A+KIV  VK
Sbjct: 351 GTNVELGKKILSDSGLNITSAESMADGAEKIVSLVK 386


>gi|92116165|ref|YP_575894.1| succinyl-CoA synthetase subunit beta [Nitrobacter hamburgensis X14]
 gi|122418688|sp|Q1QQR3|SUCC_NITHX RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91799059|gb|ABE61434.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrobacter
           hamburgensis X14]
          Length = 397

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 247/397 (62%), Positives = 309/397 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR++ VPV++GV +     AE+A +TL GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLREFGVPVSRGVPVLKASEAEAAAETLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V     ++LG+TL+T QTGP G +VN +Y+E+G+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKQFASQMLGATLVTVQTGPAGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  VAF+ ST+GG++IE+VA   P+KI    +DP  GV S    ++   L L+
Sbjct: 121 SALVDRETSRVAFVVSTEGGVNIEDVAHTSPEKIVSFSVDPATGVMSHHGRTVAKALGLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM+LLEINPL++ + G LRVLD+K+SFDDNALYRH D  
Sbjct: 181 GDLGKQAEKLVAQLYNAFIAKDMALLEINPLVVTRQGELRVLDAKVSFDDNALYRHPDAV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA + +LSY+ALDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 241 ALRDESEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVK+V +N+PLV+RLE
Sbjct: 301 GGATKDKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKQVGLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G ++I ESGLNV+ A DLDDAAQKIV AVKG
Sbjct: 361 GTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397


>gi|84500186|ref|ZP_00998452.1| succinyl-CoA synthase, beta subunit [Oceanicola batsensis HTCC2597]
 gi|84392120|gb|EAQ04388.1| succinyl-CoA synthase, beta subunit [Oceanicola batsensis HTCC2597]
          Length = 397

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 233/397 (58%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAILRDYGCPVSDGRAVLKAENAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+DI RELYL
Sbjct: 61  EADAGEKGGVRLAKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+ + ST+GGMDIEEVA   P+KI    I+P  G        +   L ++
Sbjct: 121 ALLVDRQTSAVSIVCSTEGGMDIEEVAASTPEKILSFSIEPATGYQPFHGRRVAFALGME 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF +KDM +LEINPLI+M +G L+VLD+K+ FD NALYRH DI 
Sbjct: 181 GPQVKQMVQLLDKLYRAFTEKDMEMLEINPLIVMPDGNLKVLDAKVGFDGNALYRHNDII 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGLNVI A +L D A+KIV AVKG
Sbjct: 361 GTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397


>gi|110635724|ref|YP_675932.1| succinyl-CoA synthetase subunit beta [Mesorhizobium sp. BNC1]
 gi|123353105|sp|Q11CV8|SUCC_MESSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110286708|gb|ABG64767.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chelativorans
           sp. BNC1]
          Length = 397

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 269/397 (67%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y  PVA+GV I +   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLRGYGAPVAQGVAIFTSGEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT G  AF+ ST+GGMDIE VA++ P+KI  L I P  GVT++DV  L   L+L 
Sbjct: 121 SILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDMSLLE+NPLI+M+NGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GAAAKDGETLFPILYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTSEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I++SGLNVI A DLDDAA+KIV AVK 
Sbjct: 361 GTNVDLGKKIISQSGLNVIPADDLDDAAKKIVAAVKS 397


>gi|197103624|ref|YP_002129001.1| succinyl-CoA synthetase, beta subunit sucC [Phenylobacterium
           zucineum HLK1]
 gi|226734970|sp|B4RCH3|SUCC_PHEZH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|196477044|gb|ACG76572.1| succinyl-CoA synthetase, beta subunit sucC [Phenylobacterium
           zucineum HLK1]
          Length = 399

 Score =  497 bits (1281), Expect = e-139,   Method: Composition-based stats.
 Identities = 240/397 (60%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++ V V +G    SV  A  A + L GP++VVKSQIHAGGRGKGRF+
Sbjct: 1   MNIHEHQAKAVLAEFGVAVPRGYPAFSVDEAVQAAEKLGGPVFVVKSQIHAGGRGKGRFE 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S+  V ++  E+LG  L+T QTG  G +VN +Y+E+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVDEVKANAEEMLGRVLVTHQTGAAGKQVNRLYIEEGAQIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V+ +AST+GGMDIEEVA   P+KI    IDP  GV       L   L L 
Sbjct: 121 SLLVDRETSWVSVVASTEGGMDIEEVAHATPEKIVTFSIDPATGVFPHHGRHLAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDMS+LEINPLI+  +  LRVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GGLAKEAATLLNQLYAAFLAKDMSMLEINPLIVTGDDHLRVLDAKVSFDSNALFRHADVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++LSYIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDIIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I ESGLNVI A DL D A+KIV AV+G
Sbjct: 361 GTNVDLGKKIINESGLNVIAANDLSDGAEKIVKAVRG 397


>gi|15615033|ref|NP_243336.1| succinyl-CoA synthetase subunit beta [Bacillus halodurans C-125]
 gi|21264053|sp|Q9KA20|SUCC_BACHD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|10175090|dbj|BAB06189.1| succinyl-CoA synthetase (beta subunit) [Bacillus halodurans C-125]
          Length = 386

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 211/396 (53%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLR+Y V V  G V  SV  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRQYGVAVPNGKVAFSVDEAVEAAKELGSNVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK +IDP++G+       L   + + 
Sbjct: 111 GLVLDRATSRVVMMASEEGGTEIEEVAEKTPEKIFKEIIDPVVGLQGFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYK F +KD S+ EINPL+   +G++  LD+K++FD NALYR   I 
Sbjct: 171 KELVGQAVKFMLGLYKVFVEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQKAIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 EFRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYNGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD SVKGI +NIFGGIM+CDV+ +G++ A KEV ++IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDESVKGIFVNIFGGIMKCDVIAEGVIQATKEVGLSIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G + + ESGLN+  A  + D AQKIV  VK
Sbjct: 351 GTNVDLGKKKLEESGLNITAADSMADGAQKIVSLVK 386


>gi|327441068|dbj|BAK17433.1| succinyl-CoA synthetase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 393

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 276/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V +G V  S   A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRQYGVAVPRGSVAFSPDEAVKAAKELGSNVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V S  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 58  -------GGVKIAKNLDEVRSFSKELLGKILVTHQTGPDGKEVKRLYIEEGSDIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK +IDP+ G+ +     +   + + 
Sbjct: 111 SLVLDRATSRVVMMGSEEGGMDIEEVAETNPEKIFKEVIDPVTGLNAFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L   +YKAF DKD S +EINPL++  + ++  LD+K +FD NALYRH DI 
Sbjct: 171 AKLVNKAVGLMLGIYKAFIDKDASTVEINPLVVTGDDQVVALDAKFNFDANALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 231 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ KG+++A KEV + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDIIAKGVITAAKEVGLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +L+ ESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKKLLNESGLNIVAADSMSDGAQKIVKLVE 386


>gi|296447231|ref|ZP_06889161.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
 gi|296255290|gb|EFH02387.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
          Length = 399

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 246/397 (61%), Positives = 304/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++  PVA+G  +     A  A ++LPGP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAILREFGAPVAEGTPVFEAQEARQAAQSLPGPVFVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  SL  V +  +E+LGSTL+T QTG TG +VN +Y+EDGADI +E YL
Sbjct: 61  ETAAGDKGGVRLARSLDEVETFAKEMLGSTLVTVQTGATGKQVNRLYIEDGADIAQEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +  V+F+ ST+GG DIE VA   P+KI    +DP  GV       + D L L+
Sbjct: 121 SLLIDRATSRVSFVVSTEGGTDIEAVAHATPEKIVTFSVDPATGVMPHHGRKVADALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  DL   L+ AF  KDM LLEINPLI+ K+GRLR LD+KISFDDNALYRH D+ 
Sbjct: 181 GPLVKEAVDLTEKLFSAFLAKDMELLEINPLIVTKDGRLRCLDAKISFDDNALYRHPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA ++ L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKTEEDEKEIEASKYELAYIALDGTIGCMVNGAGLAMATMDIIKLYGENPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVTAAFKIITADPKVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLAVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  ++A SGL+VI A DLDDAAQKIV AV+G
Sbjct: 361 GTNVELGKSILAASGLDVIPADDLDDAAQKIVAAVRG 397


>gi|163734161|ref|ZP_02141602.1| succinyl-CoA synthase, beta subunit [Roseobacter litoralis Och 149]
 gi|161392697|gb|EDQ17025.1| succinyl-CoA synthase, beta subunit [Roseobacter litoralis Och 149]
          Length = 397

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 238/397 (59%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E+ A  KGGVR+  S+     + +++LG TL+T QTGP G +VN +Y+EDGA I  ELYL
Sbjct: 61  EVDAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGAGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF +KDM +LEINPLI+  +G L+VLD+K++FD NA+YRH DI 
Sbjct: 181 GKQVKQCVGLMGLLYNAFMEKDMEMLEINPLIVTDSGDLKVLDAKVAFDGNAMYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRDV+EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDVTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV  G  +I  SGL+VI A +L D AQKIV AVKG
Sbjct: 361 GTNVQQGKDIINNSGLDVIAADNLKDGAQKIVKAVKG 397


>gi|23098998|ref|NP_692464.1| succinyl-CoA synthetase subunit beta [Oceanobacillus iheyensis
           HTE831]
 gi|22777226|dbj|BAC13499.1| succinyl-CoA synthetase beta subunit [Oceanobacillus iheyensis
           HTE831]
          Length = 386

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 209/396 (52%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V  G V  +V  A  A + L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLREYGVKVPNGYVAYTVDEAVQAAEKLGTSVNVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  +AS +GG +IEEVA+  P+KIFK +IDP++G+T      L   + + 
Sbjct: 111 GVVLDRATSRVVMMASEEGGTEIEEVAEATPEKIFKEVIDPVVGLTPFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY AF  KD S+ EINPL+   +G +  LD+K++FDDNALYRH DIQ
Sbjct: 171 EDLLGKAVKFMSGLYDAFVAKDCSIAEINPLVTTGDGEVLALDAKLNFDDNALYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD  EED +EI+A +++LSY++LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 DLRDFEEEDEKEIQASKYDLSYVSLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K++ + IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQIGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +++ ESGLN+ TA  + D A+KIV AVK
Sbjct: 351 GTNVDAGKKILDESGLNITTATSMADGAEKIVAAVK 386


>gi|229541104|ref|ZP_04430164.1| succinyl-CoA synthetase, beta subunit [Bacillus coagulans 36D1]
 gi|229325524|gb|EEN91199.1| succinyl-CoA synthetase, beta subunit [Bacillus coagulans 36D1]
          Length = 386

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 200/395 (50%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +V  A  A K+L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGKVAFTVDEAVEAAKSLGTQVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +  +E+LG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAQELLGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAAKTPEKIFKETIDPAVGLLPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL++  +G++  LD+K++FD N L+R  D+ 
Sbjct: 171 AKLVNQAVKFMTGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNGLFRQQDVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED +EIEA +++LSY+ALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 AYRDLEEEDPKEIEASKYDLSYVALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKGI +NIFGGIM+CDV+  G+++A K+V ++IPLV+RLE
Sbjct: 291 GGATEEKVTEAFKIILSDEKVKGIFVNIFGGIMKCDVIASGVVAATKQVGLDIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGL ++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLKIVAAESMADGAQKIVELV 385


>gi|222087461|ref|YP_002545998.1| succinyl-CoA synthetase beta subunit protein [Agrobacterium
           radiobacter K84]
 gi|254778424|sp|B9JCF4|SUCC_AGRRK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|221724909|gb|ACM28065.1| succinyl-CoA synthetase beta subunit protein [Agrobacterium
           radiobacter K84]
          Length = 397

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 270/397 (68%), Positives = 334/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA GV I S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSFGAPVADGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++ +++LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSPDAKGGVRLAKSIEDVVANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ D  ++ D L+L+
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDM+LLE+NPLI+M NGRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GAAREDGAKLFPILYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKVSFDGNALFRHEDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EI+A +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397


>gi|110678921|ref|YP_681928.1| succinyl-CoA synthetase subunit beta [Roseobacter denitrificans OCh
           114]
 gi|109455037|gb|ABG31242.1| succinyl-CoA synthase, beta subunit [Roseobacter denitrificans OCh
           114]
          Length = 397

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 237/397 (59%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G V+     A++A   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+     + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  V+F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF +KDM +LEINPLI+   G L+VLD+K++FD NA+YRH DI 
Sbjct: 181 GKQVKQCVGLMGLLYTAFMEKDMEMLEINPLIVTNTGDLKVLDAKVAFDGNAIYRHADIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV  G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVQQGKDIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|152976202|ref|YP_001375719.1| succinyl-CoA synthetase subunit beta [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189046883|sp|A7GRG6|SUCC_BACCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|152024954|gb|ABS22724.1| succinyl-CoA synthetase, beta subunit [Bacillus cytotoxicus NVH
           391-98]
          Length = 386

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAILRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILGSTL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAENILGSTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFHINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRVFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|149185337|ref|ZP_01863654.1| succinyl-CoA synthetase, beta subunit [Erythrobacter sp. SD-21]
 gi|148831448|gb|EDL49882.1| succinyl-CoA synthetase, beta subunit [Erythrobacter sp. SD-21]
          Length = 399

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 230/396 (58%), Positives = 288/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY + V  G    +V  A    K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGIAVPAGHAAMTVEEAVEGAKKLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D++GGVR+  S+  V ++ +E+LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELGPDARGGVRLSKSIDDVEANAKEMLGNTLVTIQTGDEGKQVNRLYVTDGVDIEKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VA IAST+GGMDIE+VA + P+KI  + IDP  G       ++   L+L 
Sbjct: 121 SMLVDRATGRVAMIASTEGGMDIEDVAHETPEKITTITIDPAQGFMPHHGRAVAFALKLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF D DM +LEINPL+  K G L VLD+K+SFD N+LYRH D++
Sbjct: 181 GDTNKQCQKLAKQLYTAFMDLDMEMLEINPLVEDKEGNLLVLDTKMSFDGNSLYRHKDVE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 AMRDETEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +V+GIL+NIFGGIMRCD + +GI+ A KEV +++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVVAAKEVDLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVEKGKDILANSGLPIVPADDLGDAARKIVAEVK 396


>gi|89053312|ref|YP_508763.1| succinyl-CoA synthetase subunit beta [Jannaschia sp. CCS1]
 gi|122499441|sp|Q28U74|SUCC_JANSC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|88862861|gb|ABD53738.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Jannaschia sp.
           CCS1]
          Length = 397

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 228/397 (57%), Positives = 289/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL +Y  PV+ G V++    A++A   + GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLAQYGAPVSDGRVVTKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S +    + +++LG TL+T QTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EADAGEAGGVRLAKSAQEAADEAKKMLGRTLVTHQTGPVGKQVNRIYIEDGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR S  ++F+ ST+GGMDIEEVA   P+KI    +DP  G        +   L L+
Sbjct: 121 ALLVDRQSSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPYHGRRVAFSLGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       L   L+ AF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH D+ 
Sbjct: 181 GQQVKQCVKLMGQLFTAFQEKDMEMLEINPLIVTDEGNLKVLDAKVSFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGI +NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGIFVNIFGGIMRCDIIAEGVIAAVKEVGLQMPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  SGL+VI A DL D AQKIV AVKG
Sbjct: 361 GTNVEKGKEIINNSGLDVIAADDLKDGAQKIVKAVKG 397


>gi|254452580|ref|ZP_05066017.1| succinyl-CoA synthase, beta subunit [Octadecabacter antarcticus
           238]
 gi|198266986|gb|EDY91256.1| succinyl-CoA synthase, beta subunit [Octadecabacter antarcticus
           238]
          Length = 397

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 288/397 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL  Y  PV+ G  +     A++A   L GP++VVK+QIHAGGRGKG F+
Sbjct: 1   MNIHEYQAKALLASYGAPVSDGRAVLKAEDAKTAASELDGPIWVVKAQIHAGGRGKGHFQ 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S+     + +++LG TL+T QTGP G +VN VY+EDGA I  E YL
Sbjct: 61  EAGAGEAGGVRLTKSVGEAADEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGAAIESEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L 
Sbjct: 121 ALLVDRQTSRIGFVVSTEGGMDIEEVAANTPEKIVNFTVDPATGYQAFHGRRVAFTLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ      +L   LYKAF +KDM +LEINPLI+ K G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GQQVKQCINLMGLLYKAFTEKDMEMLEINPLIVTKAGDLKVLDAKVSFDGNAIYRHPDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 SLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  +I  SGL+VI A DL D A+KIV AVKG
Sbjct: 361 GTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKAVKG 397


>gi|294500951|ref|YP_003564651.1| succinate-CoA ligase subunit beta [Bacillus megaterium QM B1551]
 gi|295706297|ref|YP_003599372.1| succinate-CoA ligase subunit beta [Bacillus megaterium DSM 319]
 gi|294350888|gb|ADE71217.1| succinate-CoA ligase, beta subunit [Bacillus megaterium QM B1551]
 gi|294803956|gb|ADF41022.1| succinate-CoA ligase, beta subunit [Bacillus megaterium DSM 319]
          Length = 386

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 206/396 (52%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRKY V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKYGVAVPNGRVAFTVEEAVEAAKELGSQVSVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +  ++ILG TL+T QTGP G  V  + VE+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAQDILGKTLVTHQTGPEGKEVKRLLVEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  + S +GG +IEEVA+  P+KIFK  +DP IG+ +     L   + + 
Sbjct: 111 GLVLDRATSQVVLMGSEEGGTEIEEVAEKTPEKIFKEYVDPAIGLQAFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY  F +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAVKFMTGLYTVFVEKDCSIAEINPLVVTGDGDVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A K+V +++PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIATGVVEATKQVGLSLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++ +SGLN+  A  + D AQKIV  VK
Sbjct: 351 GTNVELGKEILQKSGLNITAAESMADGAQKIVSLVK 386


>gi|85375531|ref|YP_459593.1| succinyl-CoA synthetase subunit beta [Erythrobacter litoralis
           HTCC2594]
 gi|122543284|sp|Q2N695|SUCC_ERYLH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|84788614|gb|ABC64796.1| succinyl-CoA synthetase, beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 399

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 228/396 (57%), Positives = 287/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY + +  G    +V  A +  K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNLHEYQAKELLAKYGIGIPAGHAALTVEEAVAGAKQLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V +  RE+LG+TL+T QTG  G +VN +YV DG DI  E YL
Sbjct: 61  ELGPDAKGGVRLAKSIEDVEASAREMLGNTLVTVQTGEEGKQVNRLYVTDGVDIASEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR SG V  I ST+GGMDIEEVA   P+KI  + IDP  G       ++   L+L 
Sbjct: 121 SMVVDRASGRVGMIVSTEGGMDIEEVAHSTPEKITTITIDPAQGFMPHHGRAVAFALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF D D  +LEINPL+  ++G+L VLD+K+S D NALYRH D++
Sbjct: 181 GDLNKQAQKLAKQLYTAFMDLDCEMLEINPLVETEDGQLLVLDTKMSIDGNALYRHKDVE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD +EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 EMRDETEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +V+GIL+NIFGGIMRCD + +GI+ A KEV++++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVVAAKEVELDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVEKGKDILANSGLPIVPADDLGDAARKIVAEVK 396


>gi|297584024|ref|YP_003699804.1| succinyl-CoA synthetase subunit beta [Bacillus selenitireducens
           MLS10]
 gi|297142481|gb|ADH99238.1| succinyl-CoA synthetase, beta subunit [Bacillus selenitireducens
           MLS10]
          Length = 387

 Score =  496 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 207/396 (52%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRKY V V  G V  SV  A  A + L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKYGVAVPNGKVAYSVDEAVKAAEELGTDISVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG  L+T QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYADEILGKVLVTHQTGPEGKEVKRLLIEEGCDIQNEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +  +  +AS +GG +IEEVA + P+KIFK +IDP+ G+       L   + + 
Sbjct: 111 GIVVDRATSRITMMASEEGGTEIEEVAAETPEKIFKEIIDPVTGLMPYQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +       LYK F +KD S+ EINPL+   +G +  LD+K++FD NAL+R  DI 
Sbjct: 171 KEMLKEAVKFMMGLYKVFEEKDCSIAEINPLVTTGDGSVMALDAKLNFDSNALFRQKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 EFRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++  G+++A KEV + IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIYVNIFGGIMKCDIIADGVVAATKEVGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN+  A  + D AQKIV  VK
Sbjct: 351 GTNVELGKKILKESGLNITAADSMADGAQKIVSLVK 386


>gi|315648147|ref|ZP_07901248.1| succinyl-CoA synthetase, beta subunit [Paenibacillus vortex V453]
 gi|315276793|gb|EFU40136.1| succinyl-CoA synthetase, beta subunit [Paenibacillus vortex V453]
          Length = 386

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 273/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A  A ++L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLKQYGVAVPNGKVAFTVEEAVEAAQSLGSPVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRAYAEEILGKVLVTHQTGPEGKEVKRLLIEEGCDIRKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK ++DP IG+ +     L   + + 
Sbjct: 111 GVVVDRATGRVVLMASEEGGTEIEEVAAATPEKIFKEVVDPAIGLQTFQARKLAYSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVGKAVQFMLALYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIMRCDV+  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPQVKGIFVNIFGGIMRCDVIATGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVDLGKQILAESGLNIVPADSMADGAQKIVSLVQ 386


>gi|89098658|ref|ZP_01171540.1| succinyl-CoA synthetase subunit beta [Bacillus sp. NRRL B-14911]
 gi|89086620|gb|EAR65739.1| succinyl-CoA synthetase subunit beta [Bacillus sp. NRRL B-14911]
          Length = 386

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 206/395 (52%), Positives = 273/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVTVPNGKVAFTVEEAVEAAKELGTEVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYASEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP+IG+T+     +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAEKTPEKIFKEEIDPVIGLTAFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LY A+ +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 GKLVNQAAKFMLALYNAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 EYRDLEEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIAEGVVEAAKQVGLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++AES +++I A  + D A+KIV  V
Sbjct: 351 GTNVDLGKKILAESDIDIIAADSMSDGAEKIVSLV 385


>gi|87201182|ref|YP_498439.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           aromaticivorans DSM 12444]
 gi|123488024|sp|Q2G3G8|SUCC_NOVAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|87136863|gb|ABD27605.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 399

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 233/398 (58%), Positives = 295/398 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY V +  G+   +V  A +A K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNVHEYQAKELLAKYGVGIPAGIAALTVEEAVAAAKQLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V +  +E+LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQVNRLYVTDGVDIDKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR +G VA I ST+GGMDIEEVA   P+KI  ++IDP  G       ++   L+L 
Sbjct: 121 SMVVDRATGRVAIIVSTEGGMDIEEVAHSTPEKIATIVIDPAEGFMPHHGRAVGFALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY AF   D S+LEINPL+  K+G L VLD+K+SFD NALYRH D+ 
Sbjct: 181 GDLLKQAAKIAEQLYTAFVALDCSMLEINPLVQTKDGNLLVLDTKMSFDSNALYRHPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ALRDETEEDPAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKII  D +VKGIL+NIFGGIM+CD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+ V
Sbjct: 361 GTNVQQGKDILANSGLPIVPANDLGDAAKKIVAEVRAV 398


>gi|326386303|ref|ZP_08207927.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209528|gb|EGD60321.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 399

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 229/398 (57%), Positives = 294/398 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL K+ V +  G+   +V  A  A K LPGP+YVVK+QIHAGGRGKG+FK
Sbjct: 1   MNVHEYQAKELLAKFGVNIPAGIPALTVEEAVEAAKQLPGPVYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  ++  V +  RE+LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELPADAKGGVRLAKTIGEVETHAREMLGNTLVTVQTGEAGKQVNRLYVTDGVDIAKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR +G VA I ST+GGMDIEEVA   P+KI  ++IDP  G       ++   L+L 
Sbjct: 121 SLVVDRGTGRVALIVSTEGGMDIEEVAHSTPEKITTIVIDPAQGFMPHHGRAVAFALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  +LY+AF   D ++LEINPL+  ++G+L VLD+K+SFD NALYRH +  
Sbjct: 181 GFLNKQAQQLAKSLYEAFVSLDCAMLEINPLVETRDGQLLVLDAKLSFDSNALYRHPEEV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 VLRDETEEDPAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII  D +VKGIL+NIFGGIM+CD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G  ++  SGL ++ A DL DAA+KIV  V+ V
Sbjct: 361 GTNVEKGKEILTHSGLPIVPANDLGDAAKKIVAEVQKV 398


>gi|296330824|ref|ZP_06873299.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674342|ref|YP_003866014.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151829|gb|EFG92703.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412586|gb|ADM37705.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 385

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAKNLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKVVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|261407994|ref|YP_003244235.1| succinyl-CoA synthetase subunit beta [Paenibacillus sp. Y412MC10]
 gi|329929282|ref|ZP_08283035.1| succinate-CoA ligase, beta subunit [Paenibacillus sp. HGF5]
 gi|261284457|gb|ACX66428.1| succinyl-CoA synthetase, beta subunit [Paenibacillus sp. Y412MC10]
 gi|328936651|gb|EGG33094.1| succinate-CoA ligase, beta subunit [Paenibacillus sp. HGF5]
          Length = 386

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 273/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A  A ++L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLKQYGVAVPNGKVAFTVEEAVEAAQSLGSPVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG  L+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRAYAEEILGKVLVTHQTGPEGKEVKRLLIEEGCDIRKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK ++DP IG+ +     L   + + 
Sbjct: 111 GVVVDRATGRVVMMASEEGGTEIEEVAAATPEKIFKEVVDPAIGLQTFQARKLAYSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVGKAVQFMLALYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIMRCDV+  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPQVKGIFVNIFGGIMRCDVIATGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVDLGKQILAESGLNIVPADSMADGAQKIVSLVQ 386


>gi|188580840|ref|YP_001924285.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
           BJ001]
 gi|179344338|gb|ACB79750.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
           BJ001]
          Length = 398

 Score =  494 bits (1272), Expect = e-138,   Method: Composition-based stats.
 Identities = 239/396 (60%), Positives = 298/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I     A +A   L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVAIFKPEEAAAAADELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             PA +KGGVRV  S   V+   RE+LG TL+T QTG  G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPAGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQVNRLYIEEGASIASEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    + G L   LY AF  KDMS+LEINPL++  +G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPQAKEAGALTEKLYAAFTAKDMSMLEINPLVLTGDGHLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKEIIRTSGLNVIPADDLDDAAQKIVAAVK 396


>gi|149194472|ref|ZP_01871568.1| Succinyl-CoA synthetase, beta subunit [Caminibacter mediatlanticus
           TB-2]
 gi|149135216|gb|EDM23696.1| Succinyl-CoA synthetase, beta subunit [Caminibacter mediatlanticus
           TB-2]
          Length = 390

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 204/398 (51%), Positives = 261/398 (65%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + RKY VP  +G V  S   A    + L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIFRKYGVPTPRGGVAFSAPEARKVAEELGGNLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V    +E+LG TL+T QTGP G  V  VY+E+GADI  E YL
Sbjct: 58  -------GGVKLARSLDEVEEIAKEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKAEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AST+GGM+IEEVA+  P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIVKVAIDPTIGFQGFHARKLAFGLGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              + +       LY  + D D  ++EINPLI   +G+   LD+K+ FDDNALYRH +I 
Sbjct: 171 KDEQKEFIKFATALYNVYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EE+  EIEAK++ LSYI LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLDEEEPTEIEAKKYGLSYIKLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D VA  F+II SD +VK I +NIFGGI+RCD +  GIL A ++V++N+P+++RL+
Sbjct: 291 GGANPDTVAKGFEIILSDPNVKSIFVNIFGGIVRCDRIANGILQATEKVEVNVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      ++  + + N+I A DL D AQK V A KG
Sbjct: 351 GTNAKEAAEILRNANIKNIIPATDLKDGAQKAVKAAKG 388


>gi|30263839|ref|NP_846216.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. Ames]
 gi|47529264|ref|YP_020613.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49186686|ref|YP_029938.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Sterne]
 gi|65321163|ref|ZP_00394122.1| COG0045: Succinyl-CoA synthetase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|165873311|ref|ZP_02217916.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0488]
 gi|167642033|ref|ZP_02400263.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0193]
 gi|170689662|ref|ZP_02880842.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0465]
 gi|170709362|ref|ZP_02899776.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0389]
 gi|177655998|ref|ZP_02937125.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0174]
 gi|227813256|ref|YP_002813265.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|229604390|ref|YP_002868073.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0248]
 gi|254683457|ref|ZP_05147317.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721978|ref|ZP_05183767.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           A1055]
 gi|254735874|ref|ZP_05193580.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Western North America USA6153]
 gi|254739601|ref|ZP_05197295.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Kruger B]
 gi|254751205|ref|ZP_05203244.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Vollum]
 gi|81583679|sp|Q81WK0|SUCC_BACAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778428|sp|C3P5N7|SUCC_BACAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778429|sp|C3L791|SUCC_BACAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|30258483|gb|AAP27702.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. Ames]
 gi|47504412|gb|AAT33088.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49180613|gb|AAT55989.1| succinyl-CoA synthase, beta subunit [Bacillus anthracis str.
           Sterne]
 gi|164710949|gb|EDR16521.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0488]
 gi|167510013|gb|EDR85429.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0193]
 gi|170125736|gb|EDS94649.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0389]
 gi|170666386|gb|EDT17169.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0465]
 gi|172079897|gb|EDT65005.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0174]
 gi|227004887|gb|ACP14630.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|229268798|gb|ACQ50435.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
           anthracis str. A0248]
          Length = 386

 Score =  494 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMTDGAQKIVSLV 385


>gi|311068130|ref|YP_003973053.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus 1942]
 gi|310868647|gb|ADP32122.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus 1942]
          Length = 385

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 200/395 (50%), Positives = 272/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    + L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVERAEGLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +   E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K++IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKVVIDPAVGLQGYQARKIAFSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGQAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|163851071|ref|YP_001639114.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           PA1]
 gi|163662676|gb|ABY30043.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           PA1]
          Length = 398

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 238/396 (60%), Positives = 297/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I     A +A   L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVPIFKPEEAAAAADELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P  +KGGVRV  S   V+   RE+LG TL+T QTG  G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPEGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQVNRLYIEEGASIAAEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    + G L   LY AF  KDMS+LEINPL++  +G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPQAKEAGALTEKLYAAFTAKDMSMLEINPLVLTGDGGLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKEIIRNSGLNVIPADDLDDAAQKIVAAVK 396


>gi|126654067|ref|ZP_01725893.1| succinyl-CoA synthetase subunit beta [Bacillus sp. B14905]
 gi|126589447|gb|EAZ83594.1| succinyl-CoA synthetase subunit beta [Bacillus sp. B14905]
          Length = 386

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 206/395 (52%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  S   A    K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGKVAFSPDEAVKVAKELGSNVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 58  -------GGVKIAKNLDEVRTYAKELLGKILVTHQTGPEGKEVKRLYIEEGSDIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK ++DP++G+TS     +   + + 
Sbjct: 111 SLVLDRATSRVTMMGSEEGGMDIEEVAETNPEKIFKEVVDPVVGLTSFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+AF DKD S++EINPL++   G +  LD+K +FD NALYRH DI 
Sbjct: 171 ANLVGKAVKLMLGLYQAFIDKDASIVEINPLVVTGQGDVVALDAKFNFDANALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 231 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIM+C+++ +G+++A KE+ + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDPHVKGIFVNIFGGIMKCNIIAEGVVTAAKEIGLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G  ++  SGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKEILNASGLNIVAADSMADGAQKIVGLV 385


>gi|308173571|ref|YP_003920276.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
           DSM 7]
 gi|307606435|emb|CBI42806.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
           DSM 7]
 gi|328553496|gb|AEB23988.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
           TA208]
 gi|328911712|gb|AEB63308.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
           LL3]
          Length = 385

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 198/395 (50%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    ++L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAESLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTTDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILNESGLNITSAESMADGAQKIVSLV 385


>gi|209965472|ref|YP_002298387.1| succinyl-CoA synthetase beta chain [Rhodospirillum centenum SW]
 gi|226734979|sp|B6IP72|SUCC_RHOCS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|209958938|gb|ACI99574.1| succinyl-CoA synthetase beta chain [Rhodospirillum centenum SW]
          Length = 398

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 227/396 (57%), Positives = 298/396 (75%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK+LL+KY V V +G V  ++  A +  K L GP++VVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQAKSLLKKYGVAVPRGGVAYTLEEARAVAKELGGPVWVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   KGGVRV  S+  V++    +LG  L+TKQTGP G  V  +YVE+GADI RELYL
Sbjct: 61  DDPNG-KGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +  +  +AST+GGM+IEEVA   P+KI K+ IDP+ G+       +   L L+
Sbjct: 120 SMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           +YKAF D DMSL+E+NPL++  +G +  LD+K++FDDNALYRH +I+
Sbjct: 180 GKQVGACTKFLLGMYKAFTDLDMSLVEVNPLVVTGSGEVLALDAKVNFDDNALYRHHEIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEE++ E EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 ELRDESEEEASETEATRHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD  V+GIL+NIFGGIMRCDV+  G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVTTAFKLILSDPHVEGILVNIFGGIMRCDVIADGVVAAAREVSLHVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++AESGL +++A +L DAA+KIV AVK
Sbjct: 360 GTNVDLGKKILAESGLPILSADNLADAAEKIVKAVK 395


>gi|228992564|ref|ZP_04152491.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           pseudomycoides DSM 12442]
 gi|228998612|ref|ZP_04158199.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock3-17]
 gi|229006112|ref|ZP_04163800.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock1-4]
 gi|228755188|gb|EEM04545.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock1-4]
 gi|228761080|gb|EEM10039.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           Rock3-17]
 gi|228767198|gb|EEM15834.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           pseudomycoides DSM 12442]
          Length = 386

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 204/395 (51%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+A+ +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAYIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|169827109|ref|YP_001697267.1| succinyl-CoA synthetase subunit beta [Lysinibacillus sphaericus
           C3-41]
 gi|168991597|gb|ACA39137.1| Succinyl-CoA synthetase beta chain [Lysinibacillus sphaericus
           C3-41]
          Length = 391

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 206/395 (52%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  S   A    K L   + VVK+QIHAGGRGK    
Sbjct: 6   MNIHEYQGKEILRKYGVAVPNGKVAFSPDEAVKVAKELGSNVTVVKAQIHAGGRGKA--- 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 63  -------GGVKIAKNLDEVRTYAKELLGKILVTHQTGPEGKEVKRLYIEEGSDIQKEYYL 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK ++DP++G+TS     +   + + 
Sbjct: 116 SLVLDRATSRVTMMGSEEGGMDIEEVAETNPEKIFKEVVDPVVGLTSFQARRMAFNMNIP 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+AF DKD S++EINPL++   G +  LD+K +FD NALYRH DI 
Sbjct: 176 ANLVGKAVKLMLGLYQAFIDKDASIVEINPLVVTGQGEVVALDAKFNFDANALYRHKDIV 235

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 236 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 295

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  VKGI +NIFGGIM+C+++ +G+++A KE+ + +PLV+RLE
Sbjct: 296 GGATAEKVTEAFKIILSDPHVKGIFVNIFGGIMKCNIIAEGVVTAAKEIGLAVPLVVRLE 355

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G  ++  SGLN++ A  + D AQKIV  V
Sbjct: 356 GTNVELGKEILNASGLNIVAADSMADGAQKIVGLV 390


>gi|229086389|ref|ZP_04218565.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-44]
 gi|228696905|gb|EEL49714.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-44]
          Length = 386

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 204/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+A+ +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 NELVGQAVKFMMGLYRAYIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|146307523|ref|YP_001187988.1| succinyl-CoA synthetase subunit beta [Pseudomonas mendocina ymp]
 gi|189081770|sp|A4XV90|SUCC_PSEMY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145575724|gb|ABP85256.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pseudomonas
           mendocina ymp]
          Length = 388

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACEKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAANWLGKRLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPYQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GDQVKQFTHIFVGLAKLFQDYDLALLEVNPLVIKADGNLHCLDAKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLADSGLNIIAATSLTDAAQQVVKAAEG 387


>gi|90421717|ref|YP_530087.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           BisB18]
 gi|122477686|sp|Q21CW8|SUCC_RHOPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|90103731|gb|ABD85768.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisB18]
          Length = 399

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 236/396 (59%), Positives = 303/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+ + V ++KGV I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLQPFGVSLSKGVAILKATDAEAAAKQLGGPIWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++ V     E+LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIEEVKQYAAEMLGATLVTIQTGPAGKQVNRLYIEDGSDIEKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM+IE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SLLVDRVTSRISFVVSTEGGMNIEDVAHDTPEKIISFSVDPATGIMGHHGRTVAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDM +LEINPL++ K G L+ LD+K+SFD NALYRH DI 
Sbjct: 181 GDLAKQAERLVAQLYAAFISKDMEMLEINPLVVTKQGELKCLDAKMSFDGNALYRHPDIS 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKIIT+D +VKGILINIFGGIM+CD++ +G+++AVK+V + +PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKDVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I ESGLNV++A DLDDAAQKIV AVK
Sbjct: 361 GTNVEAGKKIIQESGLNVLSADDLDDAAQKIVKAVK 396


>gi|312113427|ref|YP_004011023.1| succinyl-CoA synthetase subunit beta [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218556|gb|ADP69924.1| succinyl-CoA synthetase, beta subunit [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 399

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 228/396 (57%), Positives = 284/396 (71%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKA+L++Y VPV KG    +   A +  K L GP+ VVK+QIHAGGRGKG FK
Sbjct: 1   MNVHEYQAKAILKEYGVPVPKGHAAFTPEEAFAVAKELGGPIAVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S   V +   E+LG TL+T QTGP G  V  + +E+GA I RELYL
Sbjct: 61  EPEAGEKGGVRIAKSFDDVRTFADEMLGRTLVTVQTGPEGRVVKRLLIEEGAAIKRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  VA IAST+GGMDIEEVA D P+KI    IDP  G +      +   L L+
Sbjct: 121 SFLVDRATSRVAVIASTEGGMDIEEVAHDAPEKILTFSIDPASGYSQFHGRKVAFELGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  +LYKAF +KDMS LEINPLI+ + G L  LD+K++FD NALYRH +I 
Sbjct: 181 GDQVKQCVKLIGSLYKAFVEKDMSQLEINPLIVTEKGDLVCLDAKLNFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+ A +++LSY+ LDG+IGC+VNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDLEEEDPAEVLASRYDLSYVKLDGSIGCLVNGAGLAMATMDIIKLYGSEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGIL+NIFGGIMRCD++ +GI++A +E+ + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIILSDPNVKGILVNIFGGIMRCDIIAEGIIAAAREMSLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  +I  SGL VI A +L DAA+KIV  VK
Sbjct: 361 GTNVELGKEIIRNSGLAVIPADNLADAAEKIVAEVK 396


>gi|16078672|ref|NP_389491.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309484|ref|ZP_03591331.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313809|ref|ZP_03595614.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318733|ref|ZP_03600027.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323004|ref|ZP_03604298.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|3183562|sp|P80886|SUCC_BACSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta; AltName: Full=Vegetative protein 63;
           Short=VEG63
 gi|2462967|emb|CAA04419.1| putative succinyl-coA synthetase beta chain [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|2633981|emb|CAB13482.1| succinyl-CoA synthetase (beta subunit) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291484160|dbj|BAI85235.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
           natto BEST195]
          Length = 385

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 272/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A  + K+L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|154686025|ref|YP_001421186.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
           FZB42]
 gi|189046881|sp|A7Z4M9|SUCC_BACA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|154351876|gb|ABS73955.1| SucC [Bacillus amyloliquefaciens FZB42]
          Length = 385

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 198/395 (50%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A    ++L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVEKAESLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     E+LG TL+T QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKTKDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILNESGLNITSAESMADGAQKIVSLV 385


>gi|229157412|ref|ZP_04285490.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 4342]
 gi|228626139|gb|EEK82888.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 4342]
          Length = 386

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDRNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|321315375|ref|YP_004207662.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BSn5]
 gi|320021649|gb|ADV96635.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BSn5]
          Length = 385

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 202/395 (51%), Positives = 272/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V +G V  +   A  + K+L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG TLIT QTGP G  +  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLDEVKAYAEELLGKTLITHQTGPDGQVIKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  +  +AS +GG +IEEVA+  P+KI K +IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL++  +G +  LD+K++FD NALYR  DI 
Sbjct: 171 KELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A ++V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G ++++ESGLN+ +A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILSESGLNITSAESMADGAQKIVSLV 385


>gi|163856372|ref|YP_001630670.1| succinyl-CoA synthetase subunit beta [Bordetella petrii DSM 12804]
 gi|226734926|sp|A9IKE3|SUCC_BORPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|163260100|emb|CAP42401.1| Succinyl-CoA synthetase, beta chain [Bordetella petrii]
          Length = 386

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ VPV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVPVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  L+T QTGP G +VN +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDDVRKLASEILGMQLVTHQTGPEGQKVNRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI    IDPL G+ +E    + + + L 
Sbjct: 111 SLVTDRATQKVAIIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLQAEQAKKVAESIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     D+F  LY  + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 GGSADQAADVFQKLYTCYMDTDASLVEINPLNCDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKGVKAILVNIFGGIMRCDVIAEGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++A+SGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLADSGLPIISADTMAEAATRVVAAVK 386


>gi|126734828|ref|ZP_01750574.1| succinyl-CoA synthetase, beta subunit [Roseobacter sp. CCS2]
 gi|126715383|gb|EBA12248.1| succinyl-CoA synthetase, beta subunit [Roseobacter sp. CCS2]
          Length = 397

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 230/397 (57%), Positives = 293/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  ++    A++A   + GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRPVTRAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S++    + +++LG TL+T QTGP G +VN +Y+EDG+ I  E+YL
Sbjct: 61  EADAGEAGGVRLAKSVEEAAQEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETEMYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  + F+ ST+GGMDIEEVA++ P+KI    +DP  G  +     +   L L 
Sbjct: 121 ALLVDRATSRIGFVCSTEGGMDIEEVAENTPEKILNFTVDPATGYQAFHGRRVAFALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLYKAF +KDM +LEINPLI+   G L+VLD+K++FD NA+YRH D+ 
Sbjct: 181 GNQVKQCVALMGNLYKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVAFDGNAVYRHADVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G R+I ES ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEEGKRIINESDVDVIAADDLKDGAEKIVKAVKG 397


>gi|330503177|ref|YP_004380046.1| succinyl-CoA synthetase subunit beta [Pseudomonas mendocina NK-01]
 gi|328917463|gb|AEB58294.1| succinyl-CoA synthetase subunit beta [Pseudomonas mendocina NK-01]
          Length = 388

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACEKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAANWLGKRLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  +DPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATVDPLVGAQPYQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GDQVKQFTHIFVGLAKLFQDYDLALLEVNPLVIKADGNLHCLDAKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLADSGLNIIAATSLTDAAQQVVKAAEG 387


>gi|323489567|ref|ZP_08094794.1| succinyl-CoA synthetase subunit beta [Planococcus donghaensis
           MPA1U2]
 gi|323396698|gb|EGA89517.1| succinyl-CoA synthetase subunit beta [Planococcus donghaensis
           MPA1U2]
          Length = 386

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLR+Y V V+ G V  S   A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRQYGVAVSYGTVAFSPEEAVKAAKELSTDVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  +  + +E+G+DI +E Y+
Sbjct: 58  -------GGVKIAKNLDEVRTYAKELLGKVLVTHQTGPEGKEIKRLLIEEGSDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  + S +GG+DIEEV+++ P+KIFK +IDP+IG+T      +   + + 
Sbjct: 111 GLVLDRQTARVTLMGSEEGGVDIEEVSENTPEKIFKEVIDPVIGLTGFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY  F +KD S++EINPL+   +G +  LD+K  FD+NALYRH DI 
Sbjct: 171 PKLVNKAAKFMLGLYTVFIEKDASIVEINPLVETGDGNILALDAKFDFDENALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG PANFLDVG
Sbjct: 231 ELRDFDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTINYYGGTPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ +G++ A KEV + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDIIAEGVIQAAKEVSLEVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +L+ ESGLN++ A  + D A++IV  V
Sbjct: 351 GTNVELGKKLLNESGLNIVAAGTMADGAKQIVELV 385


>gi|319790379|ref|YP_004152012.1| succinyl-CoA synthetase, beta subunit [Thermovibrio ammonificans
           HB-1]
 gi|317114881|gb|ADU97371.1| succinyl-CoA synthetase, beta subunit [Thermovibrio ammonificans
           HB-1]
          Length = 389

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 195/398 (48%), Positives = 260/398 (65%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK + +KY +PV +G+V  + H AE A K L  P+ VVK+Q+HAGGRGK    
Sbjct: 1   MKIHEYQAKEIFKKYGLPVPRGIVAHNAHEAEQAAKELGTPVVVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       E++GS L T Q  P G  +NCV +E+G +I +E Y+
Sbjct: 58  -------GGVKLAKSPEEAAKIAAEMIGSRLKTYQN-PEGLSINCVLIEEGVNIDKEFYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR +    F+ S  GGM+IEE+AK  P+ I K  +DP IG+       +   + L 
Sbjct: 110 GLTLDRETSRPVFMVSAAGGMEIEEIAKTNPELIIKEHVDPAIGLLPYQARKIAFKIGLT 169

Query: 181 GQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +        +   L K + D D SL+EINPL+  K      LD+KI FDDNALYRH DI
Sbjct: 170 DRKLVSQFVKILMTLSKMYFDLDASLIEINPLVKTKEDNFICLDAKIDFDDNALYRHPDI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           QEL D ++ D  E+EAK+ +L+Y+ LDGNIGCMVNGAGLAMATMD IK +GG PANFLDV
Sbjct: 230 QELEDTTQIDPLELEAKKWDLNYVRLDGNIGCMVNGAGLAMATMDTIKFFGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A  ++VAAAFK++ SD  VK I +NIFGGI+RCD +  GI+ A K+V+++ PL++RL
Sbjct: 290 GGTATVERVAAAFKLLLSDPKVKAIFVNIFGGIVRCDRIAGGIIEAAKQVELDRPLIVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV++G +++ ESGLN+I A D+ D AQK V A KG
Sbjct: 350 EGTNVELGRKMLEESGLNIIPAKDMADGAQKAVKAAKG 387


>gi|229098305|ref|ZP_04229252.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-29]
 gi|229104398|ref|ZP_04235067.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-28]
 gi|229117322|ref|ZP_04246700.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-3]
 gi|228666222|gb|EEL21686.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-3]
 gi|228679096|gb|EEL33304.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-28]
 gi|228685203|gb|EEL39134.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-29]
          Length = 386

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 204/395 (51%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+L+ Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLKSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEVEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|42782928|ref|NP_980175.1| succinyl-CoA synthetase subunit beta [Bacillus cereus ATCC 10987]
 gi|47570337|ref|ZP_00240982.1| succinyl-CoA synthetase beta chain [Bacillus cereus G9241]
 gi|49478405|ref|YP_037897.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52141652|ref|YP_085177.1| succinyl-CoA synthetase subunit beta [Bacillus cereus E33L]
 gi|118479058|ref|YP_896209.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis str.
           Al Hakam]
 gi|217961256|ref|YP_002339824.1| succinyl-CoA synthetase subunit beta [Bacillus cereus AH187]
 gi|222097281|ref|YP_002531338.1| succinyl-CoA synthetase subunit beta [Bacillus cereus Q1]
 gi|225865817|ref|YP_002751195.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           03BB102]
 gi|228916473|ref|ZP_04080039.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228935150|ref|ZP_04097977.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228947555|ref|ZP_04109845.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228986979|ref|ZP_04147105.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229092878|ref|ZP_04224012.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-42]
 gi|229123350|ref|ZP_04252554.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           95/8201]
 gi|229140478|ref|ZP_04269033.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|229186076|ref|ZP_04313245.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BGSC 6E1]
 gi|229197946|ref|ZP_04324661.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1293]
 gi|301055326|ref|YP_003793537.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis CI]
 gi|81395103|sp|Q6HEX9|SUCC_BACHK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81409456|sp|Q732N4|SUCC_BACC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81686574|sp|Q636J0|SUCC_BACCZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046882|sp|A0RHK9|SUCC_BACAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734924|sp|B7HLG9|SUCC_BACC7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778430|sp|C1EP60|SUCC_BACC3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778431|sp|B9IVC5|SUCC_BACCQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|42738855|gb|AAS42783.1| succinyl-CoA synthase, beta subunit [Bacillus cereus ATCC 10987]
 gi|47553002|gb|EAL11408.1| succinyl-CoA synthetase beta chain [Bacillus cereus G9241]
 gi|49329961|gb|AAT60607.1| succinyl-CoA synthase, beta subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975121|gb|AAU16671.1| succinyl-CoA synthase, beta subunit [Bacillus cereus E33L]
 gi|118418283|gb|ABK86702.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bacillus
           thuringiensis str. Al Hakam]
 gi|217067520|gb|ACJ81770.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           AH187]
 gi|221241339|gb|ACM14049.1| succinyl-CoA synthase, beta subunit [Bacillus cereus Q1]
 gi|225785683|gb|ACO25900.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           03BB102]
 gi|228585525|gb|EEK43628.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1293]
 gi|228597252|gb|EEK54903.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BGSC 6E1]
 gi|228643039|gb|EEK99315.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|228660126|gb|EEL15762.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           95/8201]
 gi|228690500|gb|EEL44283.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock3-42]
 gi|228772757|gb|EEM21197.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228812075|gb|EEM58406.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228824515|gb|EEM70320.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228843052|gb|EEM88134.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|300377495|gb|ADK06399.1| succinyl-CoA synthetase subunit beta [Bacillus cereus biovar
           anthracis str. CI]
 gi|324327733|gb|ADY22993.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 386

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|118590556|ref|ZP_01547958.1| succinyl-CoA synthetase subunit beta [Stappia aggregata IAM 12614]
 gi|118437019|gb|EAV43658.1| succinyl-CoA synthetase subunit beta [Stappia aggregata IAM 12614]
          Length = 399

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 277/397 (69%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   AE+A K+LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  SL  V S+ +E+LG+TL+TKQTG  G  VN +Y+EDGADI RELYL
Sbjct: 61  ELSADAKGGVRLAFSLDEVTSNAKEMLGNTLVTKQTGAAGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G  AF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  D A LCD LEL 
Sbjct: 121 SILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTLPIDPEAGVTEADAAKLCDALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP L+ AF +KDMSLLE+NPLI+MK+G LRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GAAREDGMKLFPILHTAFVEKDMSLLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRDV+EED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDVTEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVIAADDLDDAAQKIVKAVKG 397


>gi|75674618|ref|YP_317039.1| succinyl-CoA synthetase subunit beta [Nitrobacter winogradskyi
           Nb-255]
 gi|123614178|sp|Q3SVK4|SUCC_NITWN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|74419488|gb|ABA03687.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrobacter
           winogradskyi Nb-255]
          Length = 399

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 247/398 (62%), Positives = 308/398 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR++ VPV++GV +     AE+A +TL GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLREFGVPVSRGVPVLQASEAEAAAETLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +   ++LG+TL+T QTGP G +VN +Y+E+G+DI +E Y 
Sbjct: 61  EASAGEKGGVRLARSIDEVKTFAGQMLGATLVTAQTGPAGKQVNRLYIEEGSDIDKEFYF 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  ++F+ ST+GGM+IEEVA   P+KI    +DP  GV S    ++   L L+
Sbjct: 121 SALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPATGVMSHHGRTVARALRLR 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  +DM++LEINPL++ K G LRVLD+KISFD NALYRH D+ 
Sbjct: 181 GDLGKQAEKLVTQLYDAFIARDMAMLEINPLVVTKQGELRVLDAKISFDSNALYRHSDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA + +LSY+ALDG IGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDESEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +VKGILINIFGGIM+CDV+  G+++AVK+V +N+PLV+RLE
Sbjct: 301 GGATKDKVAAAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD G ++I ESGLNV+ A DLDDAAQKIV AVK V
Sbjct: 361 GTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKAVKEV 398


>gi|218529901|ref|YP_002420717.1| succinyl-CoA synthetase subunit beta [Methylobacterium
           chloromethanicum CM4]
 gi|240138205|ref|YP_002962677.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           AM1]
 gi|254560765|ref|YP_003067860.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
           DM4]
 gi|218522204|gb|ACK82789.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           chloromethanicum CM4]
 gi|240008174|gb|ACS39400.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           AM1]
 gi|254268043|emb|CAX23914.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           DM4]
          Length = 398

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 238/396 (60%), Positives = 297/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV++GV I     A +A   L GP++VVKSQIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSRGVPIFKPEEAAAAADELGGPVWVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P  +KGGVRV  S   V+   RE+LG TL+T QTG  G +VN +Y+E+GA I  E YL
Sbjct: 61  GAPEGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQVNRLYIEEGAAIAAEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    + G L   LY AF  KDMS+LEINPL++  +G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPQAKEAGALTEKLYAAFTAKDMSMLEINPLVLTGDGGLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKEIIRNSGLNVIPADDLDDAAQKIVAAVK 396


>gi|311030144|ref|ZP_07708234.1| succinyl-CoA synthetase subunit beta [Bacillus sp. m3-13]
          Length = 386

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 207/395 (52%), Positives = 272/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGRVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V     EILG TLIT QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVREYAGEILGKTLITHQTGPEGKEVKRLLIEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK ++DP++G+T      +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAEQTPEKIFKEVVDPVVGLTGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          +LY AF +KD S+ EINPL++  + ++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMSLYTAFVEKDCSIAEINPLVVTGDAKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++  G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDDNVKGIFVNIFGGIMKCDIIATGVVEAAKQVGLEVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVDLGKQILRESGLNIVAAESMADGAQKIVAQV 385


>gi|317129221|ref|YP_004095503.1| succinyl-CoA synthetase subunit beta [Bacillus cellulosilyticus DSM
           2522]
 gi|315474169|gb|ADU30772.1| succinyl-CoA synthetase, beta subunit [Bacillus cellulosilyticus
           DSM 2522]
          Length = 387

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 209/397 (52%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR Y V V  G V  SV  A  A K+L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRSYGVAVPNGKVAFSVDEAVEAAKSLGTEVNVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG TL+T QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIKSEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  +  +AS +GG +IEEVA++ P+KIFK +IDP++G+       L   + + 
Sbjct: 111 GLVVDRATDRIVMMASEEGGTEIEEVAEETPEKIFKEVIDPVVGLMPYQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +       LY+ F DKD S+ EINPL+   +G++  LD+K++FD NALYR   I 
Sbjct: 171 KDLVREAVKFMLGLYQVFADKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQKAIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYNGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G+++A KEV + IPLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDENVKGIYVNIFGGIMKCDVIAEGVVAATKEVGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G +++ ESGL++  A  + D A+KIV  VKG
Sbjct: 351 GTNVDLGKKILEESGLDITAADSMADGAEKIVSLVKG 387


>gi|228928884|ref|ZP_04091916.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228830691|gb|EEM76296.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 386

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|218898989|ref|YP_002447400.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           G9842]
 gi|226734922|sp|B7IUJ5|SUCC_BACC2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218541995|gb|ACK94389.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           G9842]
          Length = 386

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 206/395 (52%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNIHIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|218234588|ref|YP_002368637.1| succinyl-CoA synthetase subunit beta [Bacillus cereus B4264]
 gi|228902339|ref|ZP_04066496.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 4222]
 gi|228909661|ref|ZP_04073484.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 200]
 gi|228922590|ref|ZP_04085890.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228954112|ref|ZP_04116141.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228960052|ref|ZP_04121716.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228966781|ref|ZP_04127825.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|229071334|ref|ZP_04204557.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           F65185]
 gi|229081091|ref|ZP_04213601.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock4-2]
 gi|229111307|ref|ZP_04240860.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-15]
 gi|229129112|ref|ZP_04258085.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-Cer4]
 gi|229146407|ref|ZP_04274778.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST24]
 gi|229152035|ref|ZP_04280230.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1550]
 gi|229180112|ref|ZP_04307456.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           172560W]
 gi|229192005|ref|ZP_04318975.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 10876]
 gi|296504331|ref|YP_003666031.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           BMB171]
 gi|226734923|sp|B7HDV9|SUCC_BACC4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218162545|gb|ACK62537.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           B4264]
 gi|228591556|gb|EEK49405.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           ATCC 10876]
 gi|228603321|gb|EEK60798.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           172560W]
 gi|228631384|gb|EEK88018.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           m1550]
 gi|228637040|gb|EEK93499.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST24]
 gi|228654349|gb|EEL10214.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-Cer4]
 gi|228672083|gb|EEL27374.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock1-15]
 gi|228702135|gb|EEL54611.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           Rock4-2]
 gi|228711788|gb|EEL63740.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           F65185]
 gi|228792880|gb|EEM40438.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228799568|gb|EEM46521.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228805678|gb|EEM52268.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228837019|gb|EEM82360.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228849950|gb|EEM94781.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 200]
 gi|228857308|gb|EEN01811.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis IBL 4222]
 gi|296325383|gb|ADH08311.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           BMB171]
          Length = 386

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 206/395 (52%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|254470947|ref|ZP_05084350.1| succinyl-CoA synthetase, beta subunit [Pseudovibrio sp. JE062]
 gi|211960089|gb|EEA95286.1| succinyl-CoA synthetase, beta subunit [Pseudovibrio sp. JE062]
          Length = 399

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 276/398 (69%), Positives = 330/398 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   A++A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAKAAADKLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S   V S   E+LG+TL+T QTG  G  VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAFSKDEVESHANEMLGNTLVTAQTGDAGKVVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDRT G VAF+AST+GGMDIEEVA   P+KI  L I+PL GVT E  A+LCD L+L+
Sbjct: 121 SLLVDRTCGQVAFVASTEGGMDIEEVAHATPEKILTLPINPLEGVTEEKAAALCDTLKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR DG  LFP LYKAF +KDM+LLEINPLI+M+NGRLRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GEARKDGMKLFPILYKAFVEKDMALLEINPLIVMENGRLRVLDAKVSFDGNALFRHEDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA +H+L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKTEEDEKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV +AFKIITSD +V+GIL+NIFGGIMRCDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTSAFKIITSDPNVQGILVNIFGGIMRCDVIAEGVLAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV++G ++I ESG+NVI A DLDDAAQKIV AVK V
Sbjct: 361 GTNVELGKKIINESGMNVIPADDLDDAAQKIVAAVKEV 398


>gi|229031466|ref|ZP_04187466.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1271]
 gi|228729755|gb|EEL80735.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1271]
          Length = 386

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEQTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYR+ DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|229162772|ref|ZP_04290729.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           R309803]
 gi|228620654|gb|EEK77523.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           R309803]
          Length = 386

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLEEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|298292944|ref|YP_003694883.1| succinyl-CoA synthetase subunit beta [Starkeya novella DSM 506]
 gi|296929455|gb|ADH90264.1| succinyl-CoA synthetase, beta subunit [Starkeya novella DSM 506]
          Length = 399

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 239/396 (60%), Positives = 300/396 (75%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR+Y VPV  GV I     A++A   +PGP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKGVLREYGVPVPNGVAILDAAEADAAAAKIPGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVRV  S     ++ ++ILG TL+T QTGP G +VN VY+E+G+DI +E YL
Sbjct: 61  EADAGEKGGVRVVKSAGEAAANAKQILGKTLVTVQTGPAGKQVNRVYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  VAF+ ST+GGMDIEEVA   P+KI    IDP  GV      ++   L L 
Sbjct: 121 SALVDRATSRVAFVVSTEGGMDIEEVAHSTPEKIHTFSIDPATGVMPHHGRTVAQALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G+L   LY AF  KDM++LE+NPL++ K G L+ LD+KISFD N+LYRH D+ 
Sbjct: 181 GDLAKQAGNLVTKLYAAFVGKDMAMLEVNPLVVTKGGELKCLDAKISFDSNSLYRHPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGATEEKVTAAFKIITADPQVQGILVNIFGGIMKCDVIARGVIAAVKAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I +SGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVEEGKQIIRDSGLNVIPADDLDDAAQKIVKAVK 396


>gi|296532581|ref|ZP_06895286.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC
           49957]
 gi|296267072|gb|EFH12992.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC
           49957]
          Length = 398

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 228/397 (57%), Positives = 291/397 (73%), Gaps = 1/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLR+Y V V  G V  +   A  A + LPGP+YVVKSQIHAGGRG GRFK
Sbjct: 1   MNIHEYQGKELLRRYGVAVLDGHVAWTAEEAAEAARKLPGPVYVVKSQIHAGGRGAGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   KGGVRV  S+  V +    ++G TL+TKQTGP G  V+ VYVEDG DI RELYL
Sbjct: 61  EDPNG-KGGVRVVKSVDDVKAAAEAMIGKTLVTKQTGPAGKVVSRVYVEDGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  +  +AST+GGM+IEEVA+  P+KI K ++DP  GV+      L   L L+
Sbjct: 120 SLLVDRDSSRIVIMASTEGGMEIEEVAEHNPEKILKAVVDPASGVSGFHCRKLAFGLGLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           +YKAF + D +++EINPL++   G +  LD+K+SFDDNAL+RH D++
Sbjct: 180 GKQVASFTKFVTAMYKAFVELDCAIVEINPLVVTGAGEIVALDAKVSFDDNALFRHKDLE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SE D +E+EA +H+L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 240 ALRDDSEMDPKELEAVKHDLNYVALDGEIGCMVNGAGLAMATMDIIKLYGSSPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AF+IITSDS+VK IL+NIFGGI +CD++  GI+ A K + +++PLV+RLE
Sbjct: 300 GTATAERVTEAFRIITSDSNVKAILVNIFGGIAKCDMIANGIVVAAKNLTLSVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G +++AESGL +I A +L DAA+K+V AVKG
Sbjct: 360 GTNVDLGKKILAESGLAIIPADNLADAAEKVVRAVKG 396


>gi|150398140|ref|YP_001328607.1| succinyl-CoA synthetase subunit beta [Sinorhizobium medicae WSM419]
 gi|189030213|sp|A6UDP2|SUCC_SINMW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150029655|gb|ABR61772.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium medicae
           WSM419]
          Length = 398

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 269/397 (67%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I S   A +A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVAEGVAIFSADEAAAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  S   V++  RE+LG+TL+TKQTGP+G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA+  P+KI  + IDP  GVT++D+ +L + L+L 
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR D   LFP LYKAF +KDMSLLE+NPLI+M NGR+RVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|209885674|ref|YP_002289531.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
 gi|226734966|sp|B6JE33|SUCC_OLICO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|209873870|gb|ACI93666.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
          Length = 398

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 243/397 (61%), Positives = 304/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ V V+KGV I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVSVSKGVPILKASDAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V   + ++LG TL+T QTGP G +VN +Y+E+GADI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKQFVDQMLGKTLVTVQTGPAGKQVNRLYLEEGADIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  +AF+ ST+GGMDIE+VA D P+KI    +DP  G+       +   L+L+
Sbjct: 121 SALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDMS+LEINPLI+ K G LR LD+KISFD NA+YRH D+ 
Sbjct: 181 GDQAKQAEKLVNQLYTAFIAKDMSMLEINPLILSKQGELRCLDAKISFDSNAIYRHPDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ELRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I ESGLNV+ A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397


>gi|91975016|ref|YP_567675.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           BisB5]
 gi|123749427|sp|Q13DR5|SUCC_RHOPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91681472|gb|ABE37774.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisB5]
          Length = 399

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 235/398 (59%), Positives = 306/398 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV+ G  I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVPVSHGYPIFKASEAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V    +++L +TL+T QTGP G +VN +YVE+G++I +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKDYAQQMLHATLVTVQTGPAGKQVNRLYVEEGSEIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA D P+KI    +DP  G+ +    ++ + L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPATGIMAHHGRAVANTLGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF  KDM +LEINPL++ K G L+ LD+K+SFD NALYRH DIQ
Sbjct: 181 GEQAKQAESLVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNALYRHADIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CD++ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV+AVK V
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVNAVKQV 398


>gi|299133570|ref|ZP_07026764.1| succinyl-CoA synthetase, beta subunit [Afipia sp. 1NLS2]
 gi|298591406|gb|EFI51607.1| succinyl-CoA synthetase, beta subunit [Afipia sp. 1NLS2]
          Length = 398

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 240/397 (60%), Positives = 307/397 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ VPV+KG+ I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEFGVPVSKGIPILKASDAEAAAKELGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V + ++++LG+TL+T QTGP G +VN +Y+E+GADI +E YL
Sbjct: 61  EASAGDKGGVRLAKSVDEVKTFVQQMLGATLVTVQTGPVGKQVNRLYLEEGADIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  +AF+ ST+GGMDIE+VA D P+KI    +DP  G+       +   L+L+
Sbjct: 121 SALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDMS+LEINPLI+ K G LR LD+K+SFD NA+YRH D+ 
Sbjct: 181 GDQAKQAESLVSKLYAAFVAKDMSMLEINPLILSKQGELRCLDAKVSFDSNAIYRHPDVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I ESGLNV+ A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397


>gi|255263427|ref|ZP_05342769.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
 gi|255105762|gb|EET48436.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
          Length = 397

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 231/397 (58%), Positives = 290/397 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y  PV+ G  +     A++A   L GPL+VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLRSYGAPVSDGRPVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A   GGVR+  S+     + +++LG TL+T QTGP G +VN +Y+EDG+ I  ELYL
Sbjct: 61  EADAGDAGGVRLAKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA + P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSQISFVCSTEGGMDIEEVAAETPEKILSFSVDPAAGYQAYHGRRIAFSLGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LYKAF +KDM +LEINPLI+   G L+VLD+K+SFD NA+YRH DI 
Sbjct: 181 GAQVKQCVALMGTLYKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVSFDGNAVYRHADIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G++SAVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +I  S ++VI A DL D A+KIV AVKG
Sbjct: 361 GTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKAVKG 397


>gi|317402900|gb|EFV83442.1| succinyl-CoA ligase subunit beta [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ +PV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGIPVPRGIPALSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  L+T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDDVRKLASEILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+++E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIVTEYIDPLTGLSAEQATKIANAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFQKLYKCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATRVVAAVK 386


>gi|254759312|ref|ZP_05211337.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
           Australia 94]
          Length = 386

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVLNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMTDGAQKIVSLV 385


>gi|229174502|ref|ZP_04302034.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           MM3]
 gi|228609062|gb|EEK66352.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           MM3]
          Length = 386

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 204/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+L+ Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLKSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEQTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYR+ DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|229019031|ref|ZP_04175872.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1273]
 gi|229025277|ref|ZP_04181697.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1272]
 gi|228736030|gb|EEL86605.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1272]
 gi|228742271|gb|EEL92430.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH1273]
          Length = 386

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 206/395 (52%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|94498754|ref|ZP_01305303.1| succinyl-CoA synthetase, beta subunit [Sphingomonas sp. SKA58]
 gi|94421804|gb|EAT06856.1| succinyl-CoA synthetase, beta subunit [Sphingomonas sp. SKA58]
          Length = 399

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 225/396 (56%), Positives = 285/396 (71%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY  P+A G    SV  A  A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGAPIAAGYPAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  +L  V +   ++LG+TL+T QTG  G +VN +Y+ DGADI +E YL
Sbjct: 61  ELAPEAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQVNRLYITDGADIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  +AF+ ST+GGMDIEEVA   P+KI    +DP  G       ++   L L 
Sbjct: 121 ALLVDRATSRIAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPASGFQPHHGRAVAAALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY AF D D   +E+NPL + + G L VLD+K+ FD NA++RH DI 
Sbjct: 181 GDQAKQAAKVASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED+ E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDLTEEDAAEVEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKII  D +VKGIL+NIFGGIM+CD++  GI++A KEV +++PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIANGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+
Sbjct: 361 GTNVQEGKDILANSGLPIVPADDLGDAAKKIVAEVR 396


>gi|228940924|ref|ZP_04103483.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228973853|ref|ZP_04134429.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980443|ref|ZP_04140753.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis Bt407]
 gi|228779263|gb|EEM27520.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis Bt407]
 gi|228785878|gb|EEM33881.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228818760|gb|EEM64826.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326941605|gb|AEA17501.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 386

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|114707318|ref|ZP_01440215.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
 gi|114537199|gb|EAU40326.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
          Length = 396

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 265/395 (67%), Positives = 328/395 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA+GV I+    AE A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGFGAPVAEGVAITDAGEAEKAARMLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+++ +E+LG TL+TKQTG +G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSIEDVVANAKEMLGHTLVTKQTGESGKQVNRLYIEDGADIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR  G VAF+AST+GGMDIE VA + P+KI  L IDP  GVT  D + L D L+L 
Sbjct: 121 SILVDRAVGKVAFVASTEGGMDIETVAAETPEKIVNLPIDPTAGVTEADASKLSDALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR DG  LFP LYKAF DKDMSLLEINPLI+M NGRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GEARADGMTLFPTLYKAFMDKDMSLLEINPLIVMTNGRLRVLDAKVSFDSNALFRHDDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+YIALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYIALDGDIGCMVNGAGLAMATMDIIKLYGKEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV +AFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTSAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G +++ +SGL++ +A DLDDAAQKIV AV
Sbjct: 361 GTNVDQGKQILDQSGLDITSADDLDDAAQKIVKAV 395


>gi|299536763|ref|ZP_07050071.1| succinyl-CoA synthetase subunit beta [Lysinibacillus fusiformis
           ZC1]
 gi|298727775|gb|EFI68342.1| succinyl-CoA synthetase subunit beta [Lysinibacillus fusiformis
           ZC1]
          Length = 386

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 207/395 (52%), Positives = 274/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V V  G V  S   A    K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRKYGVAVPNGKVAFSPDEAVKVAKELGSNVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +  +E+LG  L+T QTGP G  V  +Y+E+G+DI +E YL
Sbjct: 58  -------GGVKIAKNLDEVRTYAKELLGKILVTHQTGPEGKEVKRLYIEEGSDIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +  V  + S +GGMDIEEVA+  P+KIFK ++DP++G+TS     +   + + 
Sbjct: 111 SLVLDRATSRVTVMGSEEGGMDIEEVAETNPEKIFKEVVDPVVGLTSFQARRMAFNMNIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   LY+AF DKD S++EINPL++   G +  LD+K +FD NALYRH DI 
Sbjct: 171 ANLVGKAVKLMLGLYQAFIDKDASIVEINPLVVTGQGEVVALDAKFNFDANALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMD I  YGG+PANFLDVG
Sbjct: 231 ELRDFDEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDTISYYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SDS+VKGI +NIFGGIM+C+++ +G+++A KE+ + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDSNVKGIFVNIFGGIMKCNIIAEGVVTAAKEIGLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G  ++  SGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKEILNASGLNIVAADSMADGAQKIVGLV 385


>gi|148556100|ref|YP_001263682.1| succinyl-CoA synthetase subunit beta [Sphingomonas wittichii RW1]
 gi|189030215|sp|A5VB78|SUCC_SPHWW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148501290|gb|ABQ69544.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sphingomonas
           wittichii RW1]
          Length = 399

 Score =  491 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 236/396 (59%), Positives = 294/396 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL K+ V V  G    +V  A  A K LPGP++VVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKFGVAVPAGHAALTVDEAVEAAKKLPGPIWVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S+  V ++  ++LG+TL+T QTG  G +VN +YV DGADI  E YL
Sbjct: 61  ELPADAKGGVRLSKSIDEVKANAADMLGNTLVTIQTGEAGKQVNRLYVTDGADIKSEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G +A I ST+GGMDIE+VA D P+KI  ++IDP  G       ++   L+L+
Sbjct: 121 SMLVDRKTGRIAMIVSTEGGMDIEQVAHDTPEKIRTIVIDPAEGFQPHHGRAVAFALKLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF   DMS+LE+NPL+   +G+L VLD+K+SFD NALYRH DI 
Sbjct: 181 GDLNKQAVKLAEQLYNAFIATDMSMLEVNPLVETTDGKLLVLDAKVSFDSNALYRHPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED  EIEA Q++L+YI LDG+IGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ALRDETEEDPAEIEASQYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD +VKGIL+NIFGGIMRCD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIIAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  L+A SGL ++ A DL DAA+KIV  VK
Sbjct: 361 GTNVQQGKDLLAGSGLPIVAADDLGDAARKIVAEVK 396


>gi|311105071|ref|YP_003977924.1| succinyl-CoA synthetase beta chain [Achromobacter xylosoxidans A8]
 gi|310759760|gb|ADP15209.1| succinyl-CoA synthetase beta chain [Achromobacter xylosoxidans A8]
          Length = 386

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 203/396 (51%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ VPV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVPVPRGIPALSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  LIT QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDDVRKLASEILGMQLITHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+++E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLSAEQATKIANAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFQKLYKCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++A+SGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLADSGLPIISADTMAEAATRVVAAVK 386


>gi|322382314|ref|ZP_08056221.1| succinyl-CoA synthetase subunit beta-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153667|gb|EFX46042.1| succinyl-CoA synthetase subunit beta-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 386

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 207/396 (52%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V +G V  S   A  A K L  P+ V+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRQYGVSVPQGKVAFSPEEAVEAAKALGTPVVVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   E+LG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKIAKNLDEVRTYAGELLGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRGTGRIVMMASEEGGTEIEEVAAKTPEKIFKEVVDPAIGLQPFQARKLAYAVHIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALY+H DI 
Sbjct: 171 DELVNKAVKFMMALYDAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYQHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A + +LSYIALDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIQASKFDLSYIALDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKG+ INIFGGIMRCDV+ KG+++AVKE+ ++ PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDEKVKGVFINIFGGIMRCDVIAKGVVAAVKELGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGQQILNESGLNIVAADSMADGAQKIVSLVQ 386


>gi|182680503|ref|YP_001834649.1| succinyl-CoA synthetase, beta subunit [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636386|gb|ACB97160.1| succinyl-CoA synthetase, beta subunit [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 410

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 236/395 (59%), Positives = 290/395 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR +  PV+ G  + +   AE+A + LPGP+YV+K+QIHAGGRGKG FK
Sbjct: 11  MNIHEYQAKAILRDFGAPVSHGAPVLTPGEAEAAARALPGPVYVIKAQIHAGGRGKGHFK 70

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  SL  V      +   TL+T QTGP G +V  +Y+EDG DI RE YL
Sbjct: 71  EPEAGEKGGVRLARSLAEVKQAAEAMFDRTLVTVQTGPAGRKVQRLYIEDGCDIAREFYL 130

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR++  ++F+ ST+GGMDIEEVA   P KI    IDP+ G+      +    L L 
Sbjct: 131 SLLVDRSTSRISFVVSTEGGMDIEEVAHKTPDKIVSFSIDPVTGIEPHHGRAAAVALGLG 190

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LYKAF  KDM++LE+NPL++ K GRL  LD+K+SFD NALY+H DI 
Sbjct: 191 GDQAAQITQITTSLYKAFVAKDMAMLEVNPLVLTKEGRLLCLDAKVSFDPNALYKHPDIV 250

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA + +L+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 251 ALRDENEEDPKEIEASKFDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGGNPANFLDVG 310

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D  VKGIL+NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 311 GGASKEKVIHAFKIITADPQVKGILVNIFGGIMKCDVIAEGIIGAVKEVGLKVPLVVRLE 370

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G  L+  SGL+VI A DLDDAAQKIV AV
Sbjct: 371 GTNVDLGKVLLERSGLDVIPADDLDDAAQKIVAAV 405


>gi|329897262|ref|ZP_08272000.1| Succinyl-CoA ligase [ADP-forming] beta chain [gamma proteobacterium
           IMCC3088]
 gi|328921258|gb|EGG28654.1| Succinyl-CoA ligase [ADP-forming] beta chain [gamma proteobacterium
           IMCC3088]
          Length = 387

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 273/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAQYGLPVSKGYAVDTPEEAVAAAEKIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +  ++ LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTTDEVAAFAKQWLGQRLVTYQTDENGQPVSKILVESCTDIAEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI + +IDPL+G        L   L LQ
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILRAVIDPLVGPQPFQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F +KD++L+EINPL+I + G L  LD+K+  D NA+YR   + 
Sbjct: 171 GDQIKQFVKIFMGLATMFQEKDLALIEINPLVITEQGNLHCLDAKLGVDSNAMYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDG+IGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKWELNYVALDGDIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDENVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAA+++V A KG
Sbjct: 351 GNNAELGQQVLAESGLNIIAATSLTDAAEQVVAAAKG 387


>gi|319649579|ref|ZP_08003735.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 2_A_57_CT2]
 gi|317398741|gb|EFV79423.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 2_A_57_CT2]
          Length = 386

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 203/395 (51%), Positives = 273/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRQYGVAVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYASEILGKTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP++G+T+     +   + + 
Sbjct: 111 GLVLDRATSRVVLMASEEGGTEIEEVAEQTPEKIFKEEIDPVLGLTAFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+A+ +KD S+ EINPL++  +G++  LD+K++FD NALYR  DI 
Sbjct: 171 SKLVGQAVKFMMGLYRAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDGNALYRQKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 ALRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVVEAAKQVGLTVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++AES +++I A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILAESDIDIIAAESMADGAQKIVSLV 385


>gi|39933268|ref|NP_945544.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           CGA009]
 gi|192288619|ref|YP_001989224.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           TIE-1]
 gi|81564418|sp|Q6NDB7|SUCC_RHOPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734980|sp|B3Q760|SUCC_RHOPT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|39652893|emb|CAE25635.1| succinyl-coA synthetase beta chain [Rhodopseudomonas palustris
           CGA009]
 gi|192282368|gb|ACE98748.1| succinyl-CoA synthetase, beta subunit [Rhodopseudomonas palustris
           TIE-1]
          Length = 398

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 303/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV  G  I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVPVGHGFPIFKASEAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V    +++LG+TL+T QTG  G +VN +Y+E+G+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKEFAKQMLGATLVTVQTGADGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA + P+KI    +DP  G+      ++   L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHETPEKIVSFTVDPATGIMGHHGRTVAKALNLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LY AF  KDM +LEINPL++ K G L+ LD+KISFD NALYRH DIQ
Sbjct: 181 GEQAKQAEAMVAKLYTAFVAKDMDMLEINPLVLTKQGDLKCLDAKISFDGNALYRHTDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMSPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CDV+ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVAAVKG 397


>gi|56964046|ref|YP_175777.1| succinyl-CoA synthetase subunit beta [Bacillus clausii KSM-K16]
 gi|81365977|sp|Q5WFP4|SUCC_BACSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56910289|dbj|BAD64816.1| succinyl-CoA synthetase beta subunit [Bacillus clausii KSM-K16]
          Length = 386

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 209/395 (52%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR Y V V  G V  SV  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRSYGVAVPNGKVAFSVDEAVEAAKELGSSVSVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TL+T QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAEEILGKTLVTHQTGPAGKEVKRLLIEEGCDIKSEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +  V  +AS +GG +IEEVA+  P+KIFK +IDP +G+       +   + + 
Sbjct: 111 GLVVDRATSSVVLMASEEGGTEIEEVAEKTPEKIFKEVIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ F DKD S+ EINPL+   +G++  LD+K +FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYQVFVDKDASIAEINPLVTTGDGKVMALDAKFNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+L+YIALDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLEEEDVKEIEASKHDLNYIALDGNIGCMVNGAGLAMATMDIIKHYNGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK+I SD +VKGI +NIFGGIM+CD++  G+++A KEV + IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKLILSDENVKGIFVNIFGGIMKCDIIADGVIAATKEVGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN+  A  + D AQKIV  V
Sbjct: 351 GTNVELGKKMLKESGLNITAADSMADGAQKIVSLV 385


>gi|170740403|ref|YP_001769058.1| succinyl-CoA synthetase subunit beta [Methylobacterium sp. 4-46]
 gi|168194677|gb|ACA16624.1| succinyl-CoA synthetase, beta subunit [Methylobacterium sp. 4-46]
          Length = 398

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 238/396 (60%), Positives = 301/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +PV+ G  I     AE+A + L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEFGLPVSNGKAIFKAAEAEAAARELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V +   ++LG TL+T QTG  G +VN +Y+EDG+DI  E YL
Sbjct: 61  EAKAGEKGGVRLAKSIDEVKTFAEQMLGRTLVTVQTGEAGKQVNRLYIEDGSDIDTEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VA++ ST+GGMDIE+VA D P+KI    +DP  GV      ++   L L 
Sbjct: 121 SMLVDRATGRVAYVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGVMPHHGRAVAKALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  DL   LY+AF  KDMS+LEINPLI+ K+G L+ LD+KISFD NALYRH +I 
Sbjct: 181 GPLAKEAEDLTARLYQAFTAKDMSMLEINPLIVTKDGHLKCLDAKISFDSNALYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +EIEA +++L+YIAL+G IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 QLRDTTEEDEKEIEASKYDLAYIALEGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AVK V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AV+
Sbjct: 361 GTNVEKGKEIIRSSGLNVIPADDLDDAAQKIVAAVR 396


>gi|224476371|ref|YP_002633977.1| succinyl-CoA synthetase subunit beta [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|254778452|sp|B9DPG0|SUCC_STACT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|222420978|emb|CAL27792.1| putative succinyl-CoA synthetase, beta chain [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 388

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 202/398 (50%), Positives = 269/398 (67%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   VPV +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVPVPEGRVAFTAEEAVEKAKELDTDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+GADI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVEAYANELLGKQLVTHQTGPEGKEVKRLYIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKSPEKIFKETIDPVVGLAPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL++   G +  LD+KI+FDDNAL+RH DI 
Sbjct: 171 KESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDAKINFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIMRCD++ +GI++AVKEV + +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMRCDIIAEGIVAAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV++G +++ +SGL +  A  + + AQKIV  VK V
Sbjct: 351 GTNVELGKQILKDSGLAIEPAATMAEGAQKIVKLVKEV 388


>gi|226313082|ref|YP_002772976.1| succinyl-CoA synthetase subunit beta [Brevibacillus brevis NBRC
           100599]
 gi|254778432|sp|C0ZFB3|SUCC_BREBN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226096030|dbj|BAH44472.1| succinyl-CoA synthetase beta chain [Brevibacillus brevis NBRC
           100599]
          Length = 386

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 208/396 (52%), Positives = 273/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILKQYGVKVPEGRVAFTVEEAVEAAKELGTQVNVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYASEILGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GGMDIEEVA + P+KIFK ++DP+ G+       L   + + 
Sbjct: 111 GVVVDRATGSVVMMASEEGGMDIEEVAANNPEKIFKEVVDPVTGLNGFQARRLAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          +LY+AF DKD S+ EINPL++  +G +  LD+K++FD NALYRH DI 
Sbjct: 171 KELINKAAKFMMSLYQAFVDKDASIAEINPLVVTGDGEVMALDAKLNFDSNALYRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED +EIEA + +LSYIALDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 ALRDLDEEDEKEIEASKFDLSYIALDGNIGCMVNGAGLAMATMDIVKFYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  VKGI +NIFGGIM+CDV+  G+++A K++K++ PLV+RLE
Sbjct: 291 GGATEEKVTEAFKIILRDEKVKGIFVNIFGGIMKCDVIANGVVNAAKQIKLDKPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGLN++ A  + D A+KIV  VK
Sbjct: 351 GTNVDLGKKILNESGLNIVAAESMADGAEKIVSLVK 386


>gi|117925044|ref|YP_865661.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Magnetococcus
           sp. MC-1]
 gi|117608800|gb|ABK44255.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Magnetococcus
           sp. MC-1]
          Length = 388

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 278/396 (70%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK ++ K+ V V +G V  +   AE A K L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIIAKFGVNVPRGRVAYTPQEAEMAAKELDSEVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +  +V  +   +LG TL+T QTGP G  V  +YVE+G DI RELYL
Sbjct: 58  -------GGVKVVKTTDAVREEASRMLGLTLVTHQTGPEGKEVKRLYVEEGCDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V F+AST+GGM+IEEVA+  P+KI + ++DP +G+ +    +L   L L+
Sbjct: 111 GIVIDRATSRVTFMASTEGGMEIEEVAEKSPEKILREVVDPAVGLVAFQARNLAFGLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY AF + D SL+EINPL+I   G +  LD K++FD NALYR   I+
Sbjct: 171 GKQINKAVQLMSGLYNAFMETDASLMEINPLVITGAGDVIALDCKMNFDANALYRQKAIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE+ +EIEA +H L+YIALDGNIGCMVNGAGLAMATMDIIK+ GGAPANFLDVG
Sbjct: 231 ELRDFDEENPKEIEASKHELNYIALDGNIGCMVNGAGLAMATMDIIKIKGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+I SD +VK +L+NIFGGIMRCDV+  G++ A K+V +N+PL++RLE
Sbjct: 291 GGATTERVTEAFKLILSDENVKAVLVNIFGGIMRCDVIANGVVEAAKQVNLNVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++A SGL +I+A +LDDAA K V ++K
Sbjct: 351 GTNVEKGKEILANSGLPIISADNLDDAATKAVASLK 386


>gi|27467841|ref|NP_764478.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           ATCC 12228]
 gi|57866713|ref|YP_188395.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           RP62A]
 gi|242242529|ref|ZP_04796974.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           W23144]
 gi|251810678|ref|ZP_04825151.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876321|ref|ZP_06285188.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           SK135]
 gi|38258562|sp|Q8CPH5|SUCC_STAES RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417490|sp|Q5HPU5|SUCC_STAEQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|27315386|gb|AAO04520.1|AE016747_17 succinyl-CoA synthetase beta chain [Staphylococcus epidermidis ATCC
           12228]
 gi|57637371|gb|AAW54159.1| succinyl-CoA synthase, beta subunit [Staphylococcus epidermidis
           RP62A]
 gi|242233956|gb|EES36268.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           W23144]
 gi|251805838|gb|EES58495.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295346|gb|EFA87873.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           SK135]
 gi|319401463|gb|EFV89673.1| succinyl-CoA synthetase beta chain [Staphylococcus epidermidis
           FRI909]
 gi|329724314|gb|EGG60826.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU144]
 gi|329736189|gb|EGG72461.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU028]
          Length = 388

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKAILNESGLAIEPAATMAEGAQKIVKLVK 386


>gi|239636275|ref|ZP_04677277.1| succinyl-CoA synthetase beta chain [Staphylococcus warneri L37603]
 gi|239597630|gb|EEQ80125.1| succinyl-CoA synthetase beta chain [Staphylococcus warneri L37603]
          Length = 388

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDEHVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPASTMAEGAQKIVKLVK 386


>gi|103485672|ref|YP_615233.1| succinyl-CoA synthetase, beta subunit [Sphingopyxis alaskensis
           RB2256]
 gi|98975749|gb|ABF51900.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sphingopyxis
           alaskensis RB2256]
          Length = 426

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 229/398 (57%), Positives = 287/398 (72%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL K+ V V +G+   SV  A +A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 25  MNIHEYQAKELLAKFGVAVPRGIAAMSVEEAVAAAKQLPGPLYVVKSQIHAGGRGKGKFK 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V S  RE+LG+TL+T QTG  G +VN +Y+ DGADI +E YL
Sbjct: 85  ELGPDAKGGVRLARSIEEVGSHAREMLGNTLVTIQTGEAGKQVNRLYITDGADIKKEYYL 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR S  +A +AST+GGMDIE VA + P KI  + IDP  G+      S+   LEL 
Sbjct: 145 ALLVDRASSRIAVVASTEGGMDIETVAHNTPDKIHTITIDPATGLMPHHGRSVAAALELT 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK---NGRLRVLDSKISFDDNALYRHL 237
           G        +   LY AF   D   +EINPL + +      L VLD+K+ FD NA++RH 
Sbjct: 205 GDLAKQAAKVLAGLYDAFLATDAEQIEINPLAVCEGANGDELLVLDAKLGFDGNAMFRHP 264

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DI ELRD++EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFL
Sbjct: 265 DIAELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFL 324

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA ++KV AAFKII  D +V+GIL+NIFGGIM+CD++  GI++A KEV +++PLV+
Sbjct: 325 DVGGGASKEKVTAAFKIILKDPAVEGILVNIFGGIMKCDIIADGIVAAAKEVNLSVPLVV 384

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG NV  G  ++A SGL ++ A DL DAA+KIV  V
Sbjct: 385 RLEGTNVQQGKDILANSGLPIVAANDLGDAAKKIVAEV 422


>gi|293604311|ref|ZP_06686718.1| succinyl-CoA ligase subunit beta [Achromobacter piechaudii ATCC
           43553]
 gi|292817188|gb|EFF76262.1| succinyl-CoA ligase subunit beta [Achromobacter piechaudii ATCC
           43553]
          Length = 386

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 200/396 (50%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ +PV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGIPVPRGIPALSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+ V     EILG  LIT QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLEDVRKLASEILGMQLITHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+++E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLSAEQATKIANAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LY+ + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFQKLYQCYMETDASLVEINPLNRDSKGNIIALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ ++ SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLANKSVKAILVNIFGGIMRCDVIAEGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++A+SGL +I+A  + +AA ++V AVK
Sbjct: 351 GTNEELGKKMLADSGLPIISADTMAEAATRVVAAVK 386


>gi|323137594|ref|ZP_08072671.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
 gi|322397220|gb|EFX99744.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
          Length = 398

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 243/396 (61%), Positives = 308/396 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++  PVA GV +     A +A + LPGP+YVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAILREFGAPVAMGVPVLKAEEAAAAARQLPGPVYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  +GGVR+  S++   +  +++LG+TL+T QTG  G +VN +Y+EDGA I +E YL
Sbjct: 61  EDSAGPQGGVRIAKSIEEAEAFAKQMLGATLVTLQTGDAGKQVNRLYIEDGAAIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +  +AF+ ST+GGMDIE+VA D P+KI    +DP  G+       + D L L+
Sbjct: 121 SMLIDRATSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGLMPHHGRHIADALGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      GDL   LY AF  KDM LLEINPLI+ K+G+LR LD+K+SF++NALYRH D+ 
Sbjct: 181 GDLAKQAGDLAEKLYAAFVAKDMELLEINPLIVTKDGKLRCLDAKVSFENNALYRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEED +EIEA +H+L+YI+LDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLSEEDEKEIEASKHDLAYISLDGNIGCMVNGAGLAMATMDIIKLYGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIIT+D +VKGIL+NIFGGIMRCD + +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITADPNVKGILVNIFGGIMRCDTIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G ++I ESGLNVI A DLDDAAQKIV A+K
Sbjct: 361 GTNVDLGKKIINESGLNVIPADDLDDAAQKIVGAIK 396


>gi|30021924|ref|NP_833555.1| succinyl-CoA synthetase subunit beta [Bacillus cereus ATCC 14579]
 gi|81433851|sp|Q819X0|SUCC_BACCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29897480|gb|AAP10756.1| Succinyl-CoA synthetase beta chain [Bacillus cereus ATCC 14579]
          Length = 386

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + V K+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVEKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|186473506|ref|YP_001860848.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
 gi|184195838|gb|ACC73802.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
          Length = 407

 Score =  489 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 218/396 (55%), Positives = 282/396 (71%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y V V  G V  +   AE A   L G ++VVKSQIHAGGRG GRF 
Sbjct: 1   MNIHEYQAKALLKGYGVAVPNGRVAFTPREAEDAALALGGAVWVVKSQIHAGGRGAGRFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   KGGVRV  S+  V S   ++L   L+TKQTGP G  V  VYVE+G  I RELYL
Sbjct: 61  DDPNG-KGGVRVVKSVSDVGSSAEQMLAHVLVTKQTGPAGREVKRVYVEEGCAIERELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR++  +  +AST+GGM+IEEVA   P+KI K+ IDP  G+       L   L L 
Sbjct: 120 GMLIDRSTSRITVMASTEGGMEIEEVAAHTPEKILKVAIDPATGLQPFHARQLAFGLGLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          N Y+AF + D S++EINPL++ + G +  LD+KI+FDDNAL+RH  I+
Sbjct: 180 GKQVKSATQFIANAYRAFVELDASIVEINPLVVTQQGDVIALDAKINFDDNALFRHPAIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED+ E+EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 240 ALRDEAEEDAAELEAAKHGLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AF++I  D  V+GIL+NIFGGIMRCDV+  G++SA +EV + +PLV+RLE
Sbjct: 300 GGATRERVATAFRLILRDPKVEGILVNIFGGIMRCDVIADGVVSAAREVDLRVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +++A  L DAA K+V AVK
Sbjct: 360 GTNVELGKQILRDSGLPILSADHLADAASKVVAAVK 395


>gi|220921132|ref|YP_002496433.1| succinyl-CoA synthetase subunit beta [Methylobacterium nodulans ORS
           2060]
 gi|219945738|gb|ACL56130.1| succinyl-CoA synthetase, beta subunit [Methylobacterium nodulans
           ORS 2060]
          Length = 398

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 236/396 (59%), Positives = 302/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ +PV+ G  I     AE+A + L GPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGLPVSNGKAIFKAAEAEAAARELGGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S++ V +   ++LG TL+T QTG  G +VN +Y+E+G+DI  E YL
Sbjct: 61  EPEAGEKGGVRLAKSVEEVKTFAEQMLGRTLVTVQTGEAGKQVNRLYIEEGSDIETEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G VAF+ ST+GGMDIE+VA D P+KI    +DP  G+      ++   L L 
Sbjct: 121 SMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPATGIMPHHGRAVAKALRLA 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  DL   LY+AF  KDMS+LEINPLI+ K+G L+ LD+KISFD N+LYRH +I 
Sbjct: 181 GPLAKEAEDLTARLYRAFVAKDMSMLEINPLIVTKDGHLKCLDAKISFDSNSLYRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +EIEA +++L+YIAL+G IGCMVNGAGLAMAT+DIIKLYG  PANFLDVG
Sbjct: 241 QLRDTTEEDEKEIEASKYDLAYIALEGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+  G+++AV+ V + +PLV+RLE
Sbjct: 301 GGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVRAVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I  SGLNVI A DLDDAAQKIV AV+
Sbjct: 361 GTNVEKGKEIIRSSGLNVIPADDLDDAAQKIVAAVR 396


>gi|254463090|ref|ZP_05076506.1| succinyl-CoA synthase, beta subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206679679|gb|EDZ44166.1| succinyl-CoA synthase, beta subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 398

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 232/398 (58%), Positives = 290/398 (72%), Gaps = 1/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PV+ G  +     A++A   + GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVSDGRAVLKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S      + +++LG TL+T QTGP G +VN +Y+EDG+DI  ELYL
Sbjct: 61  EADAGEKGGVRLAFSASEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIEAELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +  ++F+ ST+GGMDIEEVA   P+KI    +DP  G  +     +   L L+
Sbjct: 121 ALLVDRQTSRISFVCSTEGGMDIEEVAAATPEKIISFSVDPATGYQAFHGRRIAFELGLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII-MKNGRLRVLDSKISFDDNALYRHLDI 239
           G        L   LY+AF +KDM  LEINPLI+   +G L+VLD+K+ FD NALYRH DI
Sbjct: 181 GAQVKQCVKLMGQLYQAFVEKDMEQLEINPLIVLEGSGDLKVLDAKVGFDGNALYRHADI 240

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD +EEDS+E+EA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDV
Sbjct: 241 MALRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDV 300

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV  AFKIITSD  VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RL
Sbjct: 301 GGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRL 360

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV+ G  +I  S ++VI A DL D AQKIV AVKG
Sbjct: 361 EGTNVEEGKAIINNSDVDVIAADDLKDGAQKIVKAVKG 398


>gi|289550964|ref|YP_003471868.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           lugdunensis HKU09-01]
 gi|289180496|gb|ADC87741.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           lugdunensis HKU09-01]
          Length = 388

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAKEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+K+FK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAATTPEKVFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH DIQ
Sbjct: 171 KESINKAAKFLISLYNVFVEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|148260623|ref|YP_001234750.1| succinyl-CoA synthetase, beta subunit [Acidiphilium cryptum JF-5]
 gi|326403817|ref|YP_004283899.1| succinyl-CoA ligase beta subunit [Acidiphilium multivorum AIU301]
 gi|189046870|sp|A5FYZ9|SUCC_ACICJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146402304|gb|ABQ30831.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidiphilium
           cryptum JF-5]
 gi|325050679|dbj|BAJ81017.1| succinyl-CoA ligase beta subunit [Acidiphilium multivorum AIU301]
          Length = 398

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 224/396 (56%), Positives = 290/396 (73%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y V V  G V  +   A  A + LPGP+YVVKSQIHAGGRG G FK
Sbjct: 1   MNIHEYQAKELLKSYGVAVLDGHVAWTGEEAAEAARKLPGPVYVVKSQIHAGGRGAGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   KGGVR+  S + V +    +LG+TL+TKQTGP G  V  VYVE G DI RELYL
Sbjct: 61  DDPEG-KGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVVRRVYVEAGCDIKRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    +  +AST+GGM+IEEVA+ +P+KI ++ +DP  G++      L   L L 
Sbjct: 120 SLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPASGISGFHARRLGFGLGLD 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        +YKAF   D +++EINPL++   G +  LD+K+SFDDNALYRH D++
Sbjct: 180 ATQMKAFAKFVNAMYKAFVALDCAIVEINPLVVTGAGEVVALDAKVSFDDNALYRHPDLE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +EED +E+EA +H+L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 240 KLRDEAEEDPKELEAAKHSLNYVALDGSIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVTAAFKIILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLSVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV +G  ++++SGL +I A +L DAAQKIV AVK
Sbjct: 360 GTNVQLGKDILSKSGLPIIAADNLADAAQKIVAAVK 395


>gi|163941574|ref|YP_001646458.1| succinyl-CoA synthetase subunit beta [Bacillus weihenstephanensis
           KBAB4]
 gi|229013019|ref|ZP_04170184.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           DSM 2048]
 gi|229061439|ref|ZP_04198784.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH603]
 gi|229134644|ref|ZP_04263453.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST196]
 gi|229168575|ref|ZP_04296298.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH621]
 gi|226734925|sp|A9VT74|SUCC_BACWK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|163863771|gb|ABY44830.1| succinyl-CoA synthetase, beta subunit [Bacillus weihenstephanensis
           KBAB4]
 gi|228614981|gb|EEK72083.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH621]
 gi|228648690|gb|EEL04716.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           BDRD-ST196]
 gi|228717862|gb|EEL69510.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH603]
 gi|228748273|gb|EEL98133.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
           DSM 2048]
          Length = 386

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF +KD S+ EINPL+   +G++  LD+K++FD NALYR+ DI 
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 385


>gi|152990585|ref|YP_001356307.1| succinyl-CoA synthase, beta subunit [Nitratiruptor sp. SB155-2]
 gi|189081759|sp|A6Q391|SUCC_NITSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151422446|dbj|BAF69950.1| succinyl-CoA synthase, beta subunit [Nitratiruptor sp. SB155-2]
          Length = 390

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 207/398 (52%), Positives = 268/398 (67%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + R+Y VPV +G V  +   A    + L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIFREYGVPVPRGEVAFTGPEAREVAQRLGGDLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     E+LG TL+T QTGP G +V  VYVE+GADI +E YL
Sbjct: 58  -------GGVKLARSLDEVEKIAEEMLGMTLVTHQTGPEGKKVEKVYVEEGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR+S M   +AST+GGM+IEEVA   P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMVLDRSSEMPVMMASTEGGMEIEEVAAKTPEKIIKVAIDPTIGFQGFHGRKLAFGLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYK + DKD +L+EINPLI   +GR   LD+K+ FDDNALY+H DI 
Sbjct: 171 KEEIRPFIQFAEALYKVYMDKDANLIEINPLIKTGDGRFLALDAKMGFDDNALYKHPDIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+SEED  E+EA ++ LSY+ LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLSEEDPVEVEAAKYGLSYVNLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D VA  F++I SD +VK I +NIFGGI+RCD +  GIL A ++V++N+P+V+RL+
Sbjct: 291 GGANPDTVAKGFELILSDENVKSIFVNIFGGIVRCDRIANGILQATQQVEVNVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N +   +++  + + N+I A DL D A+K V A KG
Sbjct: 351 GTNAEEAAQILKNANIKNIIPATDLADGARKAVAAAKG 388


>gi|330685654|gb|EGG97295.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU121]
          Length = 388

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDEHVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|242373538|ref|ZP_04819112.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           M23864:W1]
 gi|242348901|gb|EES40503.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
           M23864:W1]
          Length = 388

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA + P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAANTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESIGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|315497282|ref|YP_004086086.1| succinyl-CoA synthetase, beta subunit [Asticcacaulis excentricus CB
           48]
 gi|315415294|gb|ADU11935.1| succinyl-CoA synthetase, beta subunit [Asticcacaulis excentricus CB
           48]
          Length = 425

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 242/400 (60%), Positives = 296/400 (74%), Gaps = 3/400 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           MNIHE+QAKA+L+++ V V +G    S   A  A K L      ++VVKSQIHAGGRGKG
Sbjct: 26  MNIHEHQAKAVLKEFGVAVPRGYPAFSPKEALEAAKNLKDDSTKVWVVKSQIHAGGRGKG 85

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           RF+ L  D+KGGVRV  S   V ++  E+LG  L+T QTGP G +VN +Y+E+GADI +E
Sbjct: 86  RFEGLGPDAKGGVRVVKSPADVEANADEMLGRVLVTHQTGPAGKQVNRLYIEEGADIKKE 145

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYLSLLVDR S  ++ +AST+GGMDIEEVA   P+KI    IDP  GV      +L   L
Sbjct: 146 LYLSLLVDRVSSRISVVASTEGGMDIEEVAHSTPEKIHSFTIDPATGVFPVHGRTLAHAL 205

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+G     G  L   LY AF  KDM +LEINPLII  + +L VLD+K+SFD N+L+RH 
Sbjct: 206 GLKGDLAKQGFKLLQQLYAAFNAKDMDMLEINPLIITGDDQLLVLDAKVSFDSNSLFRHP 265

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DIQ LRD+SEED++EIEA + +LSYIALDG IGCMVNGAGLAMAT+DIIKLYG  PANFL
Sbjct: 266 DIQALRDLSEEDAKEIEASKFDLSYIALDGEIGCMVNGAGLAMATLDIIKLYGSEPANFL 325

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  +KV AAFKIITSD  VKGIL+NIFGGIM+CD++  G+++AVKEV + +PLV+
Sbjct: 326 DVGGGATTEKVTAAFKIITSDPKVKGILVNIFGGIMKCDIIATGVIAAVKEVGLKVPLVV 385

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NV++G ++I ESGLNVI A DL DAA KIV AVKG
Sbjct: 386 RLEGTNVELGKKIINESGLNVIAADDLADAAAKIVKAVKG 425


>gi|307942802|ref|ZP_07658147.1| succinyl-CoA ligase [ADP-forming] subunit beta [Roseibium sp.
           TrichSKD4]
 gi|307773598|gb|EFO32814.1| succinyl-CoA ligase [ADP-forming] subunit beta [Roseibium sp.
           TrichSKD4]
          Length = 399

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 273/397 (68%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   AE+A K LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAEAAAKQLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  SL+ V S  +E+LG+ L+TKQTG +G  VN +Y+EDGADI RELYL
Sbjct: 61  ELAADAKGGVRLAFSLEEVTSHAKEMLGNALVTKQTGDSGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G  AF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  +   LCD L+L 
Sbjct: 121 SILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIHNLPIDPDTGVTEANAKQLCDWLKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP L+KAF +KDM+LLE+NPLI+MK+GRLRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GQAREDGMTLFPILHKAFVEKDMALLEVNPLIVMKDGRLRVLDAKVSFDGNALFRHDDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVIAADDLDDAAQKIVKAVKG 397


>gi|228475020|ref|ZP_04059748.1| succinyl-CoA synthetase beta chain [Staphylococcus hominis SK119]
 gi|228271005|gb|EEK12393.1| succinyl-CoA synthetase beta chain [Staphylococcus hominis SK119]
          Length = 388

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESVNKAAKFLLSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++ ESGL +  A  + + AQ+IV  VK
Sbjct: 351 GTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVK 386


>gi|27375566|ref|NP_767095.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium japonicum USDA
           110]
 gi|81740313|sp|Q89X60|SUCC_BRAJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|27348703|dbj|BAC45720.1| succinyl-CoA synthetase beta chain [Bradyrhizobium japonicum USDA
           110]
          Length = 398

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 240/397 (60%), Positives = 312/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL ++ VP++KGV +     AE+A K LPGP+YVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLGEFGVPISKGVPVLKAADAEAAAKALPGPVYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S   V    +++LG+TL+T QTGP G +VN +Y+EDG+DI +E YL
Sbjct: 61  EASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQVNRLYIEDGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V+F+ ST+GG++IE+VA + P+KI    +DP  G+      ++ + L+L 
Sbjct: 121 SLLVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPATGIMGHHGRTVANALKLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY AF  KDMS+LEINPL++ K G+LRVLD+K+SFDDNAL+RH ++ 
Sbjct: 181 GDLAKQAEKLTAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDGNIGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KVAAAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+ +AV+EV +++PLV+RLE
Sbjct: 301 GSASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIILESGLNVVPADNLDDAAQKIVKAVKG 397


>gi|332186916|ref|ZP_08388657.1| succinate-CoA ligase, beta subunit [Sphingomonas sp. S17]
 gi|332012926|gb|EGI54990.1| succinate-CoA ligase, beta subunit [Sphingomonas sp. S17]
          Length = 399

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 224/398 (56%), Positives = 289/398 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL K+ VPV  G    +V  A  A   LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKFGVPVPAGFAAMTVEEAVEASSKLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  + + V +   ++LG+TL+T QTG  G +VN +YV DG DI +E YL
Sbjct: 61  ELGPDAKGGVRLAKTAEEVRAHATDMLGNTLVTIQTGEAGKQVNRLYVTDGVDIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLV+R +G V+ +AST+GGMDIE VA D P+KI  + ID   G       ++   LEL 
Sbjct: 121 ALLVNRATGRVSMVASTEGGMDIETVAHDTPEKIHSIDIDTATGFMPHHGRAVAAALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++   LY AF   D   +EINPL + ++G+L VLD+K+ FD NA++RH D+ 
Sbjct: 181 GDLAKQAANVASKLYAAFLGTDAEQIEINPLAVTEDGKLMVLDAKVGFDGNAMFRHKDLM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED+ E+EA +++L+YI LDG+IGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDTTEEDAMELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKII SD +VKGIL+NIFGGIMRCD++  GI++A KEV + +PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIADGIVAAAKEVNLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+ G  ++A SGL ++ A DL DAA+KIV  V+ V
Sbjct: 361 GTNVEKGKEILANSGLAIVPANDLGDAAKKIVAEVQKV 398


>gi|70726669|ref|YP_253583.1| succinyl-CoA synthetase subunit beta [Staphylococcus haemolyticus
           JCSC1435]
 gi|77417491|sp|Q4L5U8|SUCC_STAHJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|68447393|dbj|BAE04977.1| succinyl-CoA synthetase (beta subunit) [Staphylococcus haemolyticus
           JCSC1435]
          Length = 388

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 200/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDTEIYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+    G +  LD+KI+FDDNAL+RH DIQ
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKINFDDNALFRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNESGLAIEPAATMAEGAQKIVKLVK 386


>gi|307294197|ref|ZP_07574041.1| succinyl-CoA synthetase, beta subunit [Sphingobium chlorophenolicum
           L-1]
 gi|306880348|gb|EFN11565.1| succinyl-CoA synthetase, beta subunit [Sphingobium chlorophenolicum
           L-1]
          Length = 399

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 228/396 (57%), Positives = 287/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY  P+A G    SV  A  A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGAPIAAGYAAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  +L  V +   ++LG+TL+T QTG  G +VN +Y+ DGADI +E YL
Sbjct: 61  ELGPDAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQVNRLYITDGADIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR S  VAF+ ST+GGMDIEEVA   P+KI    +DP  G       ++   L L 
Sbjct: 121 ALLVDRASSRVAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPASGFQPHHGRAVAAALGLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY AF D D   +E+NPL + + G L VLD+K+ FD NA++RH DI 
Sbjct: 181 GDQAKQAAKVASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFKII  D +VKGIL+NIFGGIM+CD++ +GI++A KEV +++PLV+RLE
Sbjct: 301 GGANKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+
Sbjct: 361 GTNVQQGKDILAASGLAIVPADDLGDAARKIVAEVR 396


>gi|163792306|ref|ZP_02186283.1| succinyl-CoA synthetase, beta subunit [alpha proteobacterium
           BAL199]
 gi|159182011|gb|EDP66520.1| succinyl-CoA synthetase, beta subunit [alpha proteobacterium
           BAL199]
          Length = 389

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 219/396 (55%), Positives = 285/396 (71%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL K+ V V +G V  +   A  A + L GP++VVKSQIHA         
Sbjct: 1   MNIHEYQAKALLAKFGVAVPRGGVAFTPDEAVKAAEKLGGPVWVVKSQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL +V ++   +LG TL+T QTGP G  V  +Y+EDG DI RELYL
Sbjct: 52  -GGRGKGGGVKVVKSLDAVKAEAERMLGMTLVTHQTGPQGKEVKRLYIEDGCDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  IAST+GGMDIEEVA   P KI  + IDP++G+++     +   L L+
Sbjct: 111 SLLVDRATSRVTVIASTEGGMDIEEVAAHTPDKILSVAIDPVVGMSAHYARRIAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          +LYK+F D D S++EINPL++   G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 GKQVSAAVKFMISLYKSFVDLDASMMEINPLVVTGAGDIIALDAKMNFDDNALFRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED  E+EA +H L+Y+ LDGNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 231 ELRDEDEEDPAELEAGKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLVGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+V AAFKII SD +V+GIL+NIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 291 GGATKDRVTAAFKIILSDKNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLHVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++A+SGL +++A +L DAA+KIV AVK
Sbjct: 351 GTNVELGKQILADSGLPIVSADNLGDAAEKIVKAVK 386


>gi|223044213|ref|ZP_03614250.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus capitis SK14]
 gi|314933426|ref|ZP_07840791.1| succinyl-CoA synthase, beta subunit [Staphylococcus caprae C87]
 gi|222442363|gb|EEE48471.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus capitis SK14]
 gi|313653576|gb|EFS17333.1| succinyl-CoA synthase, beta subunit [Staphylococcus caprae C87]
          Length = 388

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESIGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +V+GI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVRGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|256822756|ref|YP_003146719.1| succinyl-CoA synthetase subunit beta [Kangiella koreensis DSM
           16069]
 gi|256796295|gb|ACV26951.1| succinyl-CoA synthetase, beta subunit [Kangiella koreensis DSM
           16069]
          Length = 388

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G  + +  +A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFNEYGLPVSEGYAVDNPQSAFEAAGRIGGNVWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    ++ LG  L+T QT   G  V+ + VE+  DI +ELYL
Sbjct: 58  -------GGVKLVKTKEEVKDFAKQWLGKNLVTYQTDANGQPVSKILVEECTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPEKILKATIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++LLEINPL+I ++G L  LD+KI+ D NA+YRH  + 
Sbjct: 171 GKQVKQFTHIFLQLAKMFVEKDLALLEINPLVIKEDGDLHCLDAKINIDGNAMYRHPKLS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKFELNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV +  P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIAEGIIGAVKEVGVKAPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGLN+I A  L DAA K+V A +
Sbjct: 351 GNNAELGRKVLAESGLNIIAAESLTDAATKVVAAAE 386


>gi|314936592|ref|ZP_07843939.1| succinyl-CoA synthase, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655211|gb|EFS18956.1| succinyl-CoA synthase, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
          Length = 388

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRAMGVAVPEGRVAFTAEEAVEKAKELNSEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+K++FDDNAL+RH DI 
Sbjct: 171 KESVNKAAKFLLSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++ ESGL +  A  + + AQ+IV  VK
Sbjct: 351 GTNVKRGKEILNESGLAIEPAATMAEGAQQIVKLVK 386


>gi|293366789|ref|ZP_06613465.1| succinyl-CoA synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319090|gb|EFE59460.1| succinyl-CoA synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736634|gb|EGG72900.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
           VCU045]
          Length = 388

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G++  LD+K++FDDNAL++H DI 
Sbjct: 171 KESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFKHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKAILNESGLAIEPAATMAEGAQKIVKLVK 386


>gi|121596331|ref|YP_988227.1| succinyl-CoA synthetase subunit beta [Acidovorax sp. JS42]
 gi|222112555|ref|YP_002554819.1| succinyl-CoA synthetase subunit beta [Acidovorax ebreus TPSY]
 gi|189046871|sp|A1WD26|SUCC_ACISJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778438|sp|B9MHW0|SUCC_DIAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120608411|gb|ABM44151.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidovorax sp.
           JS42]
 gi|221731999|gb|ACM34819.1| succinyl-CoA synthetase, beta subunit [Acidovorax ebreus TPSY]
          Length = 386

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 203/396 (51%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V +   EILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKTIDDVKARASEILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T E    +   + L 
Sbjct: 111 SLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITPEQSKKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     DLF  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA KIV AV+
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKIVEAVR 386


>gi|319764917|ref|YP_004128854.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans
           BC]
 gi|330827121|ref|YP_004390424.1| succinyl-CoA synthetase subunit beta [Alicycliphilus denitrificans
           K601]
 gi|317119478|gb|ADV01967.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans
           BC]
 gi|329312493|gb|AEB86908.1| succinyl-CoA synthetase, beta subunit [Alicycliphilus denitrificans
           K601]
          Length = 386

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 204/396 (51%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V +   +ILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKTIDDVKTLASQILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T+E    +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITAEQSRKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     DLF  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH DI 
Sbjct: 171 GASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLIALDAKFNFDANALFRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA KIV AV+
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKIVEAVR 386


>gi|328545847|ref|YP_004305956.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
           synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
           l [polymorphum gilvum SL003B-26A1]
 gi|326415587|gb|ADZ72650.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
           synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
           l [Polymorphum gilvum SL003B-26A1]
          Length = 399

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 276/397 (69%), Positives = 333/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L++Y  PVA+GV I S   A +A + LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEYGAPVAEGVAIFSADEAAAAARKLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  SL+ V+ + RE+LG TL+T QTGP G  VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLSFSLEDVVKNAREMLGHTLVTAQTGPAGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G  AF+ ST+GGMDIE VA+  P+KI  + IDP  GVT  D A LCD LEL+
Sbjct: 121 SILVDRSVGRPAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDTGVTEADAARLCDALELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDMSLLEINPLI+MK+GRLRVLD+K+SFD NAL+RH +I 
Sbjct: 181 GAARADGMTLFPILYKAFMEKDMSLLEINPLIVMKDGRLRVLDAKVSFDGNALFRHPEIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDITEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCDV+ +G+L+AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVLAAVREVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++IAESGLNVI A DLDDAA+KIV AVKG
Sbjct: 361 GTNVELGKKIIAESGLNVIAADDLDDAAKKIVAAVKG 397


>gi|254445276|ref|ZP_05058752.1| succinyl-CoA synthetase, beta subunit subfamily [Verrucomicrobiae
           bacterium DG1235]
 gi|198259584|gb|EDY83892.1| succinyl-CoA synthetase, beta subunit subfamily [Verrucomicrobiae
           bacterium DG1235]
          Length = 438

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 211/395 (53%), Positives = 269/395 (68%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L  +Y +P  KG   SS    ES I +L   L VVKSQIHAGGRGKG F 
Sbjct: 46  MNIHEYQAKQLFEEYGIPCPKGSATSSSEEFESCIDSLGEGLVVVKSQIHAGGRGKGTFT 105

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV++  + +  I    ++LG+TL+T QTG  G +V  VY  +GADI +E YL
Sbjct: 106 D---GFKGGVKLAKTKEEAIEYANKMLGNTLVTIQTGEAGRKVQTVYFTEGADIEKEYYL 162

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AST+GGMDIE VA++ P KIFK+ +DP  G+    +  L   L L 
Sbjct: 163 AVLLDRATSRPVVVASTEGGMDIETVAEETPDKIFKVFVDPAYGLADFQLRELVTKLGLN 222

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L  NLY  FC+KD  ++E+NPLI    G +  LD+K+SFD NALYRH +I 
Sbjct: 223 KVESKNAAKLIRNLYTMFCEKDADMIEVNPLITTSTGEVLALDAKVSFDSNALYRHPEIV 282

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EED +EIEA +  LSYIALDG I C+VNGAGLAM+TMDIIK YGG+PANFLDVG
Sbjct: 283 ALRDLNEEDPKEIEASKFGLSYIALDGTIACLVNGAGLAMSTMDIIKHYGGSPANFLDVG 342

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII  D +VKGI +NIFGGIM CDV+  GI+ AVKEV + +PLV+RLE
Sbjct: 343 GGATKEQVVAAFKIILGDPNVKGIFVNIFGGIMDCDVIANGIVEAVKEVGLKLPLVVRLE 402

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +++   + DAAQKIV  V
Sbjct: 403 GNNVKAGKATLAGSGLTIVSGDSMADAAQKIVDLV 437


>gi|54293529|ref|YP_125944.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila str.
           Lens]
 gi|148360810|ref|YP_001252017.1| succinyl CoA synthetase subunit beta [Legionella pneumophila str.
           Corby]
 gi|296106126|ref|YP_003617826.1| succinyl-CoA synthetase beta chain [Legionella pneumophila 2300/99
           Alcoy]
 gi|81369203|sp|Q5WZ04|SUCC_LEGPL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030250|sp|A5IH21|SUCC_LEGPC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|53753361|emb|CAH14811.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila str.
           Lens]
 gi|148282583|gb|ABQ56671.1| succinyl CoA synthetase beta chain [Legionella pneumophila str.
           Corby]
 gi|295648027|gb|ADG23874.1| succinyl-CoA synthetase beta chain [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609341|emb|CBW98826.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila 130b]
          Length = 387

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV +G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +  + +LG+ L+T QT   G  VN + VE+  +I +ELYL
Sbjct: 58  -------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V  +AST+GG++IE+VA + P+KIFK+++DPL+GV           L L+
Sbjct: 111 GAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F D D+SLLEINPL+I K+G+L  LD KI+ D NAL+R   ++
Sbjct: 171 DDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RDVS+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 NMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  +G  ++ +S LNVI A  L DAA+KIV AV
Sbjct: 351 GNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAV 385


>gi|298694538|gb|ADI97760.1| succinyl-CoA synthetase beta chain [Staphylococcus aureus subsp.
           aureus ED133]
          Length = 388

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCTIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|320539328|ref|ZP_08038997.1| putative succinyl-CoA synthetase, beta subunit [Serratia symbiotica
           str. Tucson]
 gi|320030453|gb|EFW12463.1| putative succinyl-CoA synthetase, beta subunit [Serratia symbiotica
           str. Tucson]
          Length = 388

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 198/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++ H AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPHEAEEAASKIGCGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDVLGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA+D P+ I K+ IDPL+G        L   L L 
Sbjct: 111 GAVVDRSSHRVVFMASTEGGVEIEKVAQDSPELIHKMTIDPLVGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFAKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 EMRDLSQEDERESRASQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +NIP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAA ++V AV+G
Sbjct: 351 GNNAELGTKKLADSGLNIIAATSLTDAAWQVVAAVEG 387


>gi|52840778|ref|YP_094577.1| succinyl-CoA synthetase subunit beta [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627889|gb|AAU26630.1| succinyl CoA synthetase beta chain [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 406

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 200/395 (50%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y++PV +G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 20  MNLHEYQAKQLFASYDLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKA--- 76

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +  + +LG+ L+T QT   G  VN + VE+  +I +ELYL
Sbjct: 77  -------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYL 129

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V  +AST+GG++IE+VA + P+KIFK+++DPL+GV           L L+
Sbjct: 130 GAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLK 189

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL+I K+G+L  LD KI+ D NAL+R   ++
Sbjct: 190 DDQIKQFTHLMMGLGKMFVECDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLK 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RDVS+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 250 NMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 310 GGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 369

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  +G  ++ +S LNVI A  L DAA+KIV AV
Sbjct: 370 GNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAV 404


>gi|251797456|ref|YP_003012187.1| succinyl-CoA synthetase subunit beta [Paenibacillus sp. JDR-2]
 gi|247545082|gb|ACT02101.1| succinyl-CoA synthetase, beta subunit [Paenibacillus sp. JDR-2]
          Length = 386

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 207/396 (52%), Positives = 274/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  SV  A  A ++L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPEGKVAFSVDEAVEAAQSLGTPVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V +   EILG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKNIDEVRAYASEILGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +G V  +AS +GG +IEEVA   P+KI K +IDP IG+       L   + + 
Sbjct: 111 GVVIDRGTGRVTMMASEEGGTEIEEVAAHSPEKIIKEVIDPAIGLQVFQARKLAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALYRH DI 
Sbjct: 171 SELVNKAVKFMIALYTAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED++EIEA +++LSYIAL+GNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ALRDLEEEDAKEIEASKYDLSYIALEGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD +VKGI +NIFGGIMRCDV+  G+++A +E+ ++ PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDENVKGIFVNIFGGIMRCDVIADGVIAAARELGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV+ VK
Sbjct: 351 GTNVELGKKMLNESGLNIVAADSMADGAQKIVNLVK 386


>gi|70729111|ref|YP_258847.1| succinyl-CoA synthetase subunit beta [Pseudomonas fluorescens Pf-5]
 gi|123657011|sp|Q4KFY6|SUCC_PSEF5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|68343410|gb|AAY91016.1| succinyl-CoA synthase, beta subunit [Pseudomonas fluorescens Pf-5]
          Length = 388

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|288553077|ref|YP_003425012.1| succinyl-CoA synthetase subunit beta [Bacillus pseudofirmus OF4]
 gi|288544237|gb|ADC48120.1| succinyl-CoA synthetase subunit beta [Bacillus pseudofirmus OF4]
          Length = 386

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 212/396 (53%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRKY V V  G V  SV  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKYGVAVPNGKVAFSVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TLIT QTGP G  V  + +E+G DI  E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYADEILGKTLITHQTGPEGKEVKRLLIEEGCDIKNEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK +IDP +G+       L   + + 
Sbjct: 111 GLVLDRATNRVVLMASEEGGTEIEEVAEATPEKIFKEVIDPAVGLQGFQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYKAF +KD S+ EINPL+   +G++  LD+K++FD NALYR  D+ 
Sbjct: 171 KELVGQAVKFMMGLYKAFSEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRQKDVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED +EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 EYRDLEEEDEKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYSGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ +G+++A KEV + IPLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDENVKGIFVNIFGGIMKCDIIAEGVVAATKEVGLEIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G +++ ESGLN+  A  + D AQKIV  VK
Sbjct: 351 GTNVDLGKQILNESGLNITAADSMADGAQKIVSLVK 386


>gi|304404233|ref|ZP_07385895.1| succinyl-CoA synthetase, beta subunit [Paenibacillus
           curdlanolyticus YK9]
 gi|304347211|gb|EFM13043.1| succinyl-CoA synthetase, beta subunit [Paenibacillus
           curdlanolyticus YK9]
          Length = 386

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 211/396 (53%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVLVPEGKVAFTVDEAVEAAKELGTSVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +   EILG TLIT QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVKAYASEILGKTLITHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK ++DP IG+ +     L   + + 
Sbjct: 111 GVVVDRGTGRVVLMASEEGGTEIEEVAAHSPEKIFKEIVDPAIGLQAFQAKRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALYRH DI 
Sbjct: 171 KELVNKAAGFMIALYTAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHADIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED +EI+A + +LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ALRDLDEEDEKEIQASKFDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKGI +NIFGGIMRCDV+ +G+++A KE+ ++ PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILSDEKVKGIFVNIFGGIMRCDVIAEGVIAAAKELGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ ESGLN++ A  + D AQKIV  VK
Sbjct: 351 GTNVELGKKMLNESGLNIVAADSMADGAQKIVALVK 386


>gi|148262238|ref|YP_001228944.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|148265508|ref|YP_001232214.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|146395738|gb|ABQ24371.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|146399008|gb|ABQ27641.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           uraniireducens Rf4]
          Length = 388

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 207/395 (52%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILREFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    R++LG TL T QTGP G  V  V VE+G +I  ELY+
Sbjct: 52  -GGRGKGGGVKLARTADEVRKIARDMLGMTLRTHQTGPEGKVVTRVLVENGCNIANELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T+     +   L L 
Sbjct: 111 SLVVDRGSSRVTVMASTEGGMDIEEVAAQTPEKIFTETVDPLVGLTAFQCRKIAFSLGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LYK F   D S+LEINPL+I     L  LD+K  FDDNA++RH  + 
Sbjct: 171 GKLVNKAVSVLQGLYKTFIACDCSMLEINPLVITAEDELLALDAKFGFDDNAVFRHPKLG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  E+EA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DMRDYDEEDPNEVEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +V+GIL+NIFGGIM+CD++  G++ A K+V +N+PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVQGILVNIFGGIMKCDIIATGVVEAAKQVSLNVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G  ++AESGLN++ A  + DAAQKIV AV
Sbjct: 351 GTNVARGKEILAESGLNIVAADGMADAAQKIVQAV 385


>gi|149183634|ref|ZP_01862051.1| succinyl-CoA synthetase subunit beta [Bacillus sp. SG-1]
 gi|148848651|gb|EDL62884.1| succinyl-CoA synthetase subunit beta [Bacillus sp. SG-1]
          Length = 386

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR   V V  G V  +   A  A KTL   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEILRNNGVAVPNGKVAFTADEAVEAAKTLDSSVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V +   E+LG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSVDEVRTYAEELLGKTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA + P+KIFK  IDP++G+T      +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAAETPEKIFKEYIDPVVGLTGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY  +  KD S++EINPL++   G +  LD+K +FD NALYR  ++ 
Sbjct: 171 KELVNKAAKFMLGLYNVYIQKDASIVEINPLVVTGGGDVMALDAKFNFDSNALYRQKNVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED++EIEA +++LSYI+LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 ELRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD +VKGI +NIFGGIM+CD++ +G++ A K+V++ +PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDENVKGIFVNIFGGIMKCDIIAEGVVEAAKQVELTVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++ ESGLN+I A  + D AQKIV  V
Sbjct: 351 GTNVDLGKKILNESGLNIIAAQSMADGAQKIVEQV 385


>gi|15966808|ref|NP_387161.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti 1021]
 gi|307301636|ref|ZP_07581395.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti
           BL225C]
 gi|307316340|ref|ZP_07595784.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti AK83]
 gi|21264047|sp|Q9EYG9|SUCC_RHIME RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|11935179|gb|AAG42005.1| succinyl-CoA synthetase beta subunit [Sinorhizobium meliloti]
 gi|15076080|emb|CAC47634.1| Probable succinyl-CoA synthetase beta chain [Sinorhizobium meliloti
           1021]
 gi|306898180|gb|EFN28922.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti AK83]
 gi|306903334|gb|EFN33923.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti
           BL225C]
          Length = 398

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 269/397 (67%), Positives = 334/397 (84%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++ +++LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA+  P+KI  + IDP  GVT+E++ +L D L+L+
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+AR D   LFP LYKAF +KDMSLLE+NPLI+M NGR+RVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDTTEEDDKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+L+AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKG 397


>gi|253731864|ref|ZP_04866029.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724274|gb|EES93003.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 388

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+I  +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVITADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|170717677|ref|YP_001784752.1| succinyl-CoA synthetase subunit beta [Haemophilus somnus 2336]
 gi|189030246|sp|B0UUF3|SUCC_HAES2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|168825806|gb|ACA31177.1| succinyl-CoA synthetase, beta subunit [Haemophilus somnus 2336]
          Length = 389

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 277/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV KG V  +V  A SAI+ L G  ++ K QIHAGGRGK    
Sbjct: 1   MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKLSGSQWIAKCQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V S   + LG  L+T QT   G  ++ +Y+E  A+I +ELYL
Sbjct: 58  -------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR+S  + F+AS++GGMDIEEVA+  P  + ++ IDPL+G        L   L L 
Sbjct: 111 SAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SLLEINPL+I+KN  L  LD+K+  DDNALYRH D+ 
Sbjct: 171 GKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRHPDLF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+++ED RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 SMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII +DS+VK +L+NIFGGI+RCD++ KGI+SA+ E+ +++P+++RLE
Sbjct: 291 GGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVSVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A+S LN+I    L +AA++ V+A K
Sbjct: 351 GTNADLGREILAQSNLNLIAVNSLTEAAEQAVNAAK 386


>gi|167644201|ref|YP_001681864.1| succinyl-CoA synthetase subunit beta [Caulobacter sp. K31]
 gi|189046906|sp|B0T3D1|SUCC_CAUSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167346631|gb|ABZ69366.1| succinyl-CoA synthetase, beta subunit [Caulobacter sp. K31]
          Length = 399

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 240/397 (60%), Positives = 303/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L ++  PV +G    +V  A +A + L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKAVLAEFGAPVPRGYPAFTVEEAVAAAEKLGGPVFVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L  D+KGGVRV  S++ V ++  E+LG  L+T QTGP G +VN +YVE+GA I +E YL
Sbjct: 61  GLGPDAKGGVRVVKSVEDVKTNAAEMLGRVLVTHQTGPKGKQVNRLYVEEGAAIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR + MV+ +AST+GGMDIE+VA   P+KI    IDP  GV      +L   L L 
Sbjct: 121 SLLVDRETSMVSVVASTEGGMDIEDVAHATPEKIHSFSIDPATGVWPTHARALAKALGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L   LY AF  KDM++LEINPLI+ ++  L+VLD+K+SFD NALYRH DI+
Sbjct: 181 GGLAKEAATLLGQLYTAFLAKDMAMLEINPLIVTEDDHLKVLDAKLSFDGNALYRHPDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIMRCD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I ESGLNVI A DL D A+KIV AVKG
Sbjct: 361 GTNVELGKKIIRESGLNVIAANDLSDGAEKIVKAVKG 397


>gi|15924235|ref|NP_371769.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926828|ref|NP_374361.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus N315]
 gi|21282857|ref|NP_645945.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49486084|ref|YP_043305.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57651814|ref|YP_186120.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus COL]
 gi|87160758|ref|YP_493835.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194953|ref|YP_499753.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267736|ref|YP_001246679.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393794|ref|YP_001316469.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221367|ref|YP_001332189.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156979566|ref|YP_001441825.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161509411|ref|YP_001575070.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142035|ref|ZP_03566528.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315603|ref|ZP_04838816.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253733517|ref|ZP_04867682.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006032|ref|ZP_05144633.2| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257425299|ref|ZP_05601724.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257427959|ref|ZP_05604357.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257430592|ref|ZP_05606974.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433353|ref|ZP_05609711.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436195|ref|ZP_05612242.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus M876]
 gi|257795699|ref|ZP_05644678.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9781]
 gi|258415923|ref|ZP_05682193.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9763]
 gi|258421685|ref|ZP_05684609.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9719]
 gi|258423914|ref|ZP_05686799.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9635]
 gi|258434841|ref|ZP_05688915.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9299]
 gi|258444583|ref|ZP_05692912.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A8115]
 gi|258447584|ref|ZP_05695728.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6300]
 gi|258449426|ref|ZP_05697529.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6224]
 gi|258452544|ref|ZP_05700550.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5948]
 gi|258454805|ref|ZP_05702769.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5937]
 gi|262048143|ref|ZP_06021030.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus D30]
 gi|269202861|ref|YP_003282130.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282892733|ref|ZP_06300968.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A8117]
 gi|282903800|ref|ZP_06311688.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282905563|ref|ZP_06313418.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282910817|ref|ZP_06318620.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914022|ref|ZP_06321809.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282916495|ref|ZP_06324257.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus D139]
 gi|282918944|ref|ZP_06326679.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C427]
 gi|282920029|ref|ZP_06327758.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A9765]
 gi|282924067|ref|ZP_06331743.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C101]
 gi|282927587|ref|ZP_06335203.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A10102]
 gi|283770308|ref|ZP_06343200.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|283957988|ref|ZP_06375439.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284024238|ref|ZP_06378636.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501053|ref|ZP_06666904.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293510015|ref|ZP_06668723.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus M809]
 gi|293526602|ref|ZP_06671287.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294848240|ref|ZP_06788987.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A9754]
 gi|295406180|ref|ZP_06815987.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8819]
 gi|296274802|ref|ZP_06857309.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297208109|ref|ZP_06924540.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297244408|ref|ZP_06928291.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8796]
 gi|297591310|ref|ZP_06949948.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300912190|ref|ZP_07129633.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|304381191|ref|ZP_07363844.1| succinyl-CoA synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039645|sp|P66872|SUCC_STAAW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54039647|sp|P99071|SUCC_STAAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54042233|sp|P66871|SUCC_STAAM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417487|sp|Q5HGI7|SUCC_STAAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417489|sp|Q6G9W8|SUCC_STAAS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122539701|sp|Q2FZ37|SUCC_STAA8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123486207|sp|Q2FHJ3|SUCC_STAA3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030216|sp|A7X1L8|SUCC_STAA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030217|sp|A6U164|SUCC_STAA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030218|sp|A5ISD0|SUCC_STAA9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030219|sp|A6QGE5|SUCC_STAAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030220|sp|A8Z3S5|SUCC_STAAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|13701045|dbj|BAB42340.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247015|dbj|BAB57407.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204296|dbj|BAB94993.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244527|emb|CAG42956.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286000|gb|AAW38094.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus COL]
 gi|87126732|gb|ABD21246.1| succinyl-CoA synthetase, beta subunit [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87202511|gb|ABD30321.1| succinyl-CoA synthetase, beta subunit, putative [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|147740805|gb|ABQ49103.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149946246|gb|ABR52182.1| succinyl-CoA synthetase, beta subunit [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374167|dbj|BAF67427.1| succinyl-CoA synthetase, beta subunit [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156721701|dbj|BAF78118.1| succinyl-CoA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368220|gb|ABX29191.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253728571|gb|EES97300.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257271756|gb|EEV03894.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274800|gb|EEV06287.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278720|gb|EEV09339.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281446|gb|EEV11583.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284477|gb|EEV14597.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus M876]
 gi|257789671|gb|EEV28011.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9781]
 gi|257839259|gb|EEV63733.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9763]
 gi|257842371|gb|EEV66796.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9719]
 gi|257845943|gb|EEV69972.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9635]
 gi|257849202|gb|EEV73184.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A9299]
 gi|257850076|gb|EEV74029.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A8115]
 gi|257853775|gb|EEV76734.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6300]
 gi|257857414|gb|EEV80312.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A6224]
 gi|257859762|gb|EEV82604.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5948]
 gi|257863188|gb|EEV85952.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus A5937]
 gi|259163709|gb|EEW48264.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus D30]
 gi|262075151|gb|ACY11124.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269940737|emb|CBI49118.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282314039|gb|EFB44431.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C101]
 gi|282316754|gb|EFB47128.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus C427]
 gi|282319935|gb|EFB50283.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus D139]
 gi|282322090|gb|EFB52414.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325422|gb|EFB55731.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282330855|gb|EFB60369.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282590590|gb|EFB95667.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A10102]
 gi|282594745|gb|EFB99729.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A9765]
 gi|282595418|gb|EFC00382.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282764730|gb|EFC04855.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus A8117]
 gi|283460455|gb|EFC07545.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|283470458|emb|CAQ49669.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus aureus subsp. aureus ST398]
 gi|283790137|gb|EFC28954.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285816927|gb|ADC37414.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus aureus
           04-02981]
 gi|290920674|gb|EFD97737.1| succinyl-CoA synthase, beta subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291096058|gb|EFE26319.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291466959|gb|EFF09477.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus M809]
 gi|294825040|gb|EFG41462.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A9754]
 gi|294968768|gb|EFG44790.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8819]
 gi|296887352|gb|EFH26254.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297178438|gb|EFH37684.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus A8796]
 gi|297576196|gb|EFH94912.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300886436|gb|EFK81638.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|302332851|gb|ADL23044.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|302751068|gb|ADL65245.1| succinate--CoA ligase (ADP-forming) beta subunit [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304340174|gb|EFM06115.1| succinyl-CoA synthase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312438377|gb|ADQ77448.1| succinyl-CoA synthase beta subunit [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312829639|emb|CBX34481.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315131039|gb|EFT87023.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315194134|gb|EFU24527.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198485|gb|EFU28814.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140939|gb|EFW32786.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144346|gb|EFW36112.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323441023|gb|EGA98730.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus O11]
 gi|323443891|gb|EGB01502.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus O46]
 gi|329313914|gb|AEB88327.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
           aureus subsp. aureus T0131]
 gi|329727155|gb|EGG63611.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329733634|gb|EGG69962.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 388

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|307545699|ref|YP_003898178.1| succinyl-CoA synthetase subunit beta [Halomonas elongata DSM 2581]
 gi|307217723|emb|CBV42993.1| succinyl-CoA synthetase, subunit beta [Halomonas elongata DSM 2581]
          Length = 388

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 272/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+KG  + +   A  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFADYGLPVSKGFAVDTPEEAAEACKKIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V  + VE+  DI  ELYL
Sbjct: 58  -------GGVKLVESPEEASAFAEQWLGKNLVTFQTDEKGQPVAKILVENCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTQRVVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQARELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F DKD++LLEINPL+I + G L  LD+K++ D NALYRH D+Q
Sbjct: 171 GDQVKQFTKIFLGLSKLFHDKDLALLEINPLVITEEGNLHCLDAKVNLDGNALYRHPDLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE +A + +L+Y+AL+GNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 AMRDPSQEDEREADAAKWDLNYVALEGNIGCMVNGAGLAMGTMDIIKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD+SVK +L+NIFGGI+RCD++ +GI+ AV++V +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTSVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G   +A SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAEKLASSGLNIIAATSLTDAAQQVVKAAEG 387


>gi|49483408|ref|YP_040632.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|295427732|ref|ZP_06820364.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|77417488|sp|Q6GHJ0|SUCC_STAAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49241537|emb|CAG40223.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|295128090|gb|EFG57724.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 388

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKITKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|315658465|ref|ZP_07911337.1| succinyl-CoA ligase subunit beta [Staphylococcus lugdunensis
           M23590]
 gi|315496794|gb|EFU85117.1| succinyl-CoA ligase subunit beta [Staphylococcus lugdunensis
           M23590]
          Length = 388

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAKEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIERGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  +AS +GG +IEEVA   P KIFK  IDP++G++      +   + + 
Sbjct: 111 GFVIDRATDRITLMASEEGGTEIEEVAAKTPGKIFKETIDPVVGLSPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH DIQ
Sbjct: 171 KESINKAAKFLISLYNVFIEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVKRGKEILNDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|54296568|ref|YP_122937.1| succinyl-CoA synthetase subunit beta [Legionella pneumophila str.
           Paris]
 gi|81371112|sp|Q5X7K6|SUCC_LEGPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|53750353|emb|CAH11747.1| succinyl-CoA synthetase, beta subunit [Legionella pneumophila str.
           Paris]
          Length = 387

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV +G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +  + +LG+ L+T QT   G  VN + VE+  +I +ELYL
Sbjct: 58  -------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA + P+KIFK+++DPL+GV           L L+
Sbjct: 111 GAVVDRATRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F D D+SLLEINPL+I K+G+L  LD KI+ D NAL+R   ++
Sbjct: 171 DDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RDVS+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 NMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  +G  ++ +S LNVI A  L DAA+KIV AV
Sbjct: 351 GNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAV 385


>gi|295696101|ref|YP_003589339.1| succinyl-CoA synthetase, beta subunit [Bacillus tusciae DSM 2912]
 gi|295411703|gb|ADG06195.1| succinyl-CoA synthetase, beta subunit [Bacillus tusciae DSM 2912]
          Length = 385

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 203/395 (51%), Positives = 263/395 (66%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+L+ Y V V +G V  SV  A    + L G   VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAILKTYGVAVPQGQVAFSVEEAVRIAEGLGG-KAVVKAQIHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V    +++LGSTL+T QTGP G  V  + +E   DI +E Y+
Sbjct: 57  -------GGVKVAKSLEQVREYAQQLLGSTLVTHQTGPEGKVVKRLLIEQLTDIQKEYYI 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR +G V  +AS +GGM+IEEVA   P+KI +  IDP +G        L   + + 
Sbjct: 110 GLVVDRATGRVVIMASEEGGMEIEEVAAKTPEKIVRETIDPAVGFMPFQARKLAYAIHIP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+AF DKD S+ EINPL++  +G +  LD+K++FD N L+RH ++ 
Sbjct: 170 KPLVNKAVQFMSGLYRAFVDKDCSVAEINPLVVTGDGNILALDAKLNFDSNGLFRHPELL 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED RE +A +  LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 230 ELRDPDEEDPREQQAAKFGLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII  D  VKGIL+NIFGGIM+CDV+  G++ A +++ ++ PLV+RLE
Sbjct: 290 GGASTEKVTEAFKIILQDEKVKGILVNIFGGIMKCDVIANGVVEAARQLGLDRPLVVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++AESGL ++ A  + DAA+KIV  V
Sbjct: 350 GTNVELGKKILAESGLKIVPADSMADAAEKIVSLV 384


>gi|78223465|ref|YP_385212.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
 gi|78194720|gb|ABB32487.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
          Length = 386

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 209/395 (52%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR + VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILRNFGVPVPDGHVCYNGASAREWAKRLGDGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    R++LG TL T QTGP G  V  V VE+G +I RELY+
Sbjct: 52  -GGRGKGGGVKLARTNQEVQQIARDMLGMTLRTHQTGPEGKVVTRVLVENGCNIDRELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF+  IDPL+G+T     +L   L L 
Sbjct: 111 SLLVDRATSRVTVMASTEGGMDIEEVAAKTPEKIFREAIDPLVGLTPFQSRNLAFSLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +L   LY  F   D SLLEINPL++ K G L  LD+K  FDDNA+++H  I 
Sbjct: 171 GKLTPKAVNLLEGLYTTFLACDCSLLEINPLVVTKEGDLLALDAKFGFDDNAVFKHPGIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD +EED  E+EA QH+LSY++L+GNIGC+VNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 DFRDYNEEDPNEVEASQHDLSYVSLNGNIGCLVNGAGLAMATMDIIKFSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A ++V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVIEAARQVSLQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG +++AESGLN++ A  + D AQKIV AV
Sbjct: 351 GTNVEIGKKMLAESGLNIVAADGMADGAQKIVQAV 385


>gi|171921150|gb|ACB59226.1| succinyl-CoA synthetase beta chain [Tetrathiobacter
           mimigardefordensis]
          Length = 386

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+K+ V V +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKKFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L+T QTGP G +VN + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLAKSIDEVRQLSSEILGMQLVTHQTGPEGQKVNRLLIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR+S  V  +AS++GGMD+EEVA+  P+KI K+ +DP  G T ++   L   + + 
Sbjct: 111 GIVTDRSSQRVCVMASSEGGMDVEEVAEKTPEKILKVFVDPAKGFTDDEARELARGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +       F  LY+A+ D D SL EINPLI+  +G +  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVEKAAVEFQKLYQAYWDTDSSLAEINPLILTGSGDIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 EYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKEVKAILVNIFGGIMRCDVIAEGVIAACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA K+V AVK
Sbjct: 351 GTNEEMGKKMLAESGLPIISADTMAEAATKVVAAVK 386


>gi|312959847|ref|ZP_07774363.1| Succinyl-CoA ligase subunit beta [Pseudomonas fluorescens WH6]
 gi|311286013|gb|EFQ64578.1| Succinyl-CoA ligase subunit beta [Pseudomonas fluorescens WH6]
          Length = 404

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 17  MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 73

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 74  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A + P+KI K  IDPL+G        L   L L+
Sbjct: 127 GAVVDRSSRRIVFMASTEGGVDIEKIAHETPEKILKATIDPLVGAQPFQGRELAFQLGLE 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 187 GKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 247 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 307 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 366

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 367 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 403


>gi|218288278|ref|ZP_03492577.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|258511357|ref|YP_003184791.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|218241637|gb|EED08810.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|257478083|gb|ACV58402.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 384

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L ++ V V +G V  +V  A  A K L G   VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKAILAEFGVKVPRGKVAFTVEEAVEAAKELGG-KAVVKAQIHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V ++ RE+LG  L+T QTGP G  V  + +E+  +I +E Y+
Sbjct: 57  -------GGVKVSKSLEEVEANARELLGKRLVTHQTGPQGRIVRRLLIEELTNIQKEYYI 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+ G +  +AS +GG++IEEVA  +P+KIF+  IDPL G+T     +L   LEL 
Sbjct: 110 GLVLDRSQGRLVMMASQEGGVEIEEVAAKHPEKIFRETIDPLTGLTPFQANNLAYKLELP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A          LY A+  KD S+ EINPL++   G +  LD+K++FDDNALYRH +I 
Sbjct: 170 QDAVKKAAQFMMALYNAYVAKDCSIAEINPLVLTAEGDIIALDAKLNFDDNALYRHPEIV 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED +EIEA ++ LSYIALDGNIGCMVNGAGLAMATMD IK YGG PANFLDVG
Sbjct: 230 SLRDEDEEDPKEIEASKYGLSYIALDGNIGCMVNGAGLAMATMDTIKYYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD  VKGIL+NIFGGIM+CDV+  G+++A K+V ++ PLV+RLE
Sbjct: 290 GGASEEKVTAAFKIILSDPKVKGILVNIFGGIMKCDVIANGVVAAAKQVGLDKPLVVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G +++ ESGL ++ A  L DAAQKIV  V
Sbjct: 350 GTNVEAGKKILNESGLKLVAADSLADAAQKIVALV 384


>gi|196232107|ref|ZP_03130962.1| succinyl-CoA synthetase, beta subunit [Chthoniobacter flavus
           Ellin428]
 gi|196223829|gb|EDY18344.1| succinyl-CoA synthetase, beta subunit [Chthoniobacter flavus
           Ellin428]
          Length = 396

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 209/396 (52%), Positives = 271/396 (68%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQA+ L  K+ V   KG V ++   A +  + L    +VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQARELFEKFGVATTKGGVAATPDEAVAVAEKLGTKEFVVKAQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S+  V     ++LG  L+T QTGP G +VN V + + A I RELY 
Sbjct: 61  N---GFKGGVQITDSIGKVRELATQMLGQVLVTHQTGPEGKQVNKVLIAEPATIARELYF 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR SG    IAST+GG+DIE VA+  P+KIF+  I P +G+       +   L L 
Sbjct: 118 AILLDRASGAPVVIASTEGGVDIESVAEHTPEKIFREPIHPTLGLQPFQTRKIARALGLS 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF N++K F  +D S +E+NPL++   G +  LD+K +FDDNALYR  +I 
Sbjct: 178 GAQINAAAKLFTNMFKLFLARDCSQIEVNPLVVTDKGEILALDAKFNFDDNALYRQPEIV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED RE+ A ++NL+YI LDGNI C+VNGAGLAMATMDII+  GG PANFLDVG
Sbjct: 238 ALRDKSEEDPREVAASEYNLNYIGLDGNIACLVNGAGLAMATMDIIQYAGGKPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+V AAFKII SD +V+GIL+NIFGGIM C+V+  GI++A KEV + IPLV+RLE
Sbjct: 298 GGASKDQVTAAFKIILSDPNVEGILVNIFGGIMDCNVIATGIVAAAKEVGLKIPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G + +AESGL +I+A DL DAA+KIV  VK
Sbjct: 358 GNNVEAGKKTLAESGLALISASDLADAAKKIVAEVK 393


>gi|225850685|ref|YP_002730919.1| succinyl-CoA synthetase subunit beta [Persephonella marina EX-H1]
 gi|254778447|sp|C0QQH3|SUCC_PERMH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|225645431|gb|ACO03617.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Persephonella marina EX-H1]
          Length = 388

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 186/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  +Y +PV KG    +V  A  A + L     VVK+QIHAGGRGK    
Sbjct: 1   MKVHEHQAKEIFARYGLPVPKGYPAFTVEEAVEAAQQLGKFPVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++L  V     E+LG TL+T QTGP G  V+ +Y+E+G +I +E Y+
Sbjct: 58  -------GGVKLANNLDEVQKYAAELLGKTLVTFQTGPEGLPVSRIYIEEGTNIDKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+   +  +AS++GGM+IEEVA   P+ I   +IDP +G+       +   L L 
Sbjct: 111 AITLDRSKSKLIIMASSEGGMEIEEVAAKNPEAIITEVIDPFLGLRPYQAREIALKLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF  LY+ +  +D S++EINPL++ K G + +LD+K+ FDDNAL+RH DI 
Sbjct: 171 KNLLNKAAGLFVKLYELYMKEDASMVEINPLVLTKEGNIVILDAKVDFDDNALFRHPDIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++E   E++AKQ+NL+YI LDGNI CMVNGAGLAMATMD IKL GG PANFLDVG
Sbjct: 231 EMEDPTQESELEVKAKQYNLNYIKLDGNIACMVNGAGLAMATMDTIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ +++A AFKII SD +VK I INIFGGI+RCD L +GI+ A KEV  ++P+++R+E
Sbjct: 291 GSANAEQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIIQASKEVNPHVPIIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++AESGL++I A  + + A+K V   
Sbjct: 351 GTNVELGKKMLAESGLDLIPADTMWEGAKKAVELA 385


>gi|120613315|ref|YP_972993.1| succinyl-CoA synthetase subunit beta [Acidovorax citrulli AAC00-1]
 gi|189046867|sp|A1TW81|SUCC_ACIAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120591779|gb|ABM35219.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidovorax
           citrulli AAC00-1]
          Length = 386

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 203/396 (51%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRSFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     +ILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKKLAGDILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P KI   +IDPL G+T E    + + + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPDKIVTEMIDPLTGITPEQGRKVAEAIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     D+F  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GKSVDQALDIFAKLYKCYMDTDASLVEINPLNCDSKGDLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|330959053|gb|EGH59313.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 388

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   +I +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTNIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKDDGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|78223276|ref|YP_385023.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
 gi|78194531|gb|ABB32298.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
          Length = 387

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 211/395 (53%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILRRFGVPVPDGHVCYNGASAREWAKRLGDGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    R +LG TL T QTGP G  V  V VE+G +I RELY+
Sbjct: 52  -GGRGKGGGVKLARTSQEVQLIARNMLGMTLRTHQTGPDGKLVTRVLVENGCNIDRELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR++  V  +AST+GGMDIEEVA   P+KIFK  IDPL+G++     +L   L L 
Sbjct: 111 SLLVDRSTSKVTVMASTEGGMDIEEVAATTPEKIFKEAIDPLVGLSPFQCRNLAFSLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L  NLY  F   D SLLEINPL++ K G L  LD+K  FDDNA++RHL I 
Sbjct: 171 GKLLPKAQKLLENLYATFIACDCSLLEINPLVVTKEGDLLALDAKFGFDDNAIFRHLQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  E+EA QH+LSY++L+GNIGC+VNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 DMRDYDEEDPNEVEASQHDLSYVSLNGNIGCLVNGAGLAMATMDIIKFSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGI +NIFGGIM+CDV+  G++ A ++V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVIEAARQVSLQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV +G +L++ESGLN++ A  + D AQKIV AV
Sbjct: 351 GTNVALGKQLLSESGLNIVAADGMADGAQKIVQAV 385


>gi|28869404|ref|NP_792023.1| succinyl-CoA synthase subunit beta [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213968181|ref|ZP_03396326.1| succinyl-CoA synthase, beta subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|237803497|ref|ZP_04591082.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|289624398|ref|ZP_06457352.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646688|ref|ZP_06478031.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298486519|ref|ZP_07004579.1| Succinyl-CoA ligase [ADP-forming] beta chain [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|301383814|ref|ZP_07232232.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059592|ref|ZP_07251133.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tomato K40]
 gi|302133381|ref|ZP_07259371.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302187417|ref|ZP_07264090.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae 642]
 gi|81731468|sp|Q883Z4|SUCC_PSESM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|28852645|gb|AAO55718.1| succinyl-CoA synthase, beta subunit [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927161|gb|EEB60711.1| succinyl-CoA synthase, beta subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|298158996|gb|EFI00057.1| Succinyl-CoA ligase [ADP-forming] beta chain [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320324899|gb|EFW80971.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329265|gb|EFW85262.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867448|gb|EGH02157.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875693|gb|EGH09842.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880833|gb|EGH14982.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330888158|gb|EGH20819.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330967007|gb|EGH67267.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330987445|gb|EGH85548.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010653|gb|EGH90709.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331018594|gb|EGH98650.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331025479|gb|EGI05535.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 388

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|316931839|ref|YP_004106821.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           DX-1]
 gi|315599553|gb|ADU42088.1| succinyl-CoA synthetase, beta subunit [Rhodopseudomonas palustris
           DX-1]
          Length = 398

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 235/397 (59%), Positives = 302/397 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ V V  G  I     AE+A K L GP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLREFGVAVGHGFPIFKASEAEAAAKQLGGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+  V    +++LG+TL+T QTG  G +VN +Y+E+G+DI +E YL
Sbjct: 61  EASAGDKGGVRLAKSIDEVKDYAKQMLGATLVTVQTGADGKQVNRLYIEEGSDIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  ++F+ ST+GGM IE+VA + P+KI    +DP  G+      ++   L L+
Sbjct: 121 SLLVDRATSRISFVVSTEGGMSIEDVAHETPEKIVSFTVDPATGIMGHHGRTVAKALNLK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY AF  KDM +LEINPL++ K G L+ LD+KISFD NALYRH+DIQ
Sbjct: 181 GDQAKQAEAMVAKLYAAFVAKDMDMLEINPLVLTKQGDLKCLDAKISFDGNALYRHIDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ LDG IGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGILINIFGGIM+CDV+ +G+++AVKEV +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G ++I  SGLNV+ A +LDDAAQKIV AVKG
Sbjct: 361 GTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVAAVKG 397


>gi|333010156|gb|EGK29591.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-272]
 gi|333021111|gb|EGK40368.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-227]
          Length = 388

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|315122387|ref|YP_004062876.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495789|gb|ADR52388.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 398

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 329/398 (82%), Positives = 366/398 (91%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAKALL++Y +PVA+GVV+SS+H A+SAIKTLPG LYVVKSQIHAGGRGKGRF+
Sbjct: 1   MDIHEYQAKALLKRYGIPVAEGVVVSSIHEADSAIKTLPGGLYVVKSQIHAGGRGKGRFR 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            LPA+S+GGVR+E S++ V+SD+RE+LGS L+TKQTGP GS+VNC+Y+EDGADIL+ELYL
Sbjct: 61  GLPANSRGGVRLEKSIEGVLSDVREMLGSILVTKQTGPAGSKVNCLYIEDGADILKELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG + F+ASTQGGMDIEEVAKDYPQKIFKL ID L+GVT +D+ +LCDMLEL+
Sbjct: 121 SLLVDRVSGKITFVASTQGGMDIEEVAKDYPQKIFKLPIDSLVGVTPKDIGNLCDMLELK 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQARID   LFPNLYKAFCDKDMSLLEINPLIIM+NGRLRVLDSK+SFDDNALYR LDIQ
Sbjct: 181 GQARIDAESLFPNLYKAFCDKDMSLLEINPLIIMQNGRLRVLDSKVSFDDNALYRQLDIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D SEED REIEA++H LSYI LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 241 ELHDDSEEDVREIEARKHGLSYITLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG DQDKVAAAFKII  DSSVKGILINIFGGI+RCDVLVKGILSAVK+V +NIPLVMRLE
Sbjct: 301 GGTDQDKVAAAFKIIMLDSSVKGILINIFGGIVRCDVLVKGILSAVKDVNVNIPLVMRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           GA VDIGN+LI ESGLNVITAIDLDDAAQKIV AVKGV
Sbjct: 361 GAKVDIGNQLIVESGLNVITAIDLDDAAQKIVRAVKGV 398


>gi|113461100|ref|YP_719168.1| succinyl-CoA synthetase subunit beta [Haemophilus somnus 129PT]
 gi|123031314|sp|Q0I3A8|SUCC_HAES1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|112823143|gb|ABI25232.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Haemophilus
           somnus 129PT]
          Length = 389

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 277/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV KG V  +V  A SAI+ L G  ++ K QIHAGGRGK    
Sbjct: 1   MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKLSGSQWIAKCQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V S   + LG  L+T QT   G  ++ +Y+E  A+I +ELYL
Sbjct: 58  -------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR+S  + F+AS++GGMDIEEVA+  P  + ++ IDPL+G        L   L L 
Sbjct: 111 SAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SLLEINPL+I+KN  L  LD+K+  DDNALYRH D+ 
Sbjct: 171 GKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRHPDLF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+++ED RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 SMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII +DS+VK +L+NIFGGI+RCD++ KGI+SA+ E+ +++P+++RLE
Sbjct: 291 GGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVSVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A+S LN+I    L +AA++ V+A K
Sbjct: 351 GTNADLGCEILAQSNLNLIAVNSLTEAAEQAVNAAK 386


>gi|82750848|ref|YP_416589.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus RF122]
 gi|123549070|sp|Q2YXM1|SUCC_STAAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|82656379|emb|CAI80798.1| succinyl-CoA synthetase beta chain [Staphylococcus aureus RF122]
          Length = 388

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K     +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKEFNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G + VLD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLVLDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLE
Sbjct: 291 GSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 386


>gi|189347425|ref|YP_001943954.1| succinyl-CoA synthetase subunit beta [Chlorobium limicola DSM 245]
 gi|226734933|sp|B3EFL3|SUCC_CHLL2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189341572|gb|ACD90975.1| succinyl-CoA synthetase, beta subunit [Chlorobium limicola DSM 245]
          Length = 392

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 190/399 (47%), Positives = 267/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+K+ V V +G+V  S   A+ A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILKKFGVSVPRGIVAFSPDEAKQAAQQLFEEQGSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S    +   R++LG+TL+T QTGP G +V+ + VE+G +I R
Sbjct: 61  A----------GGVKLAKSPDEAMEIARQMLGATLVTHQTGPEGKQVSRLLVEEGMNIDR 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P K+ K+ +DPL G+           
Sbjct: 111 EFYVGITLDRSTSRNVLMVSTEGGMEIEKVAEETPDKLLKIQVDPLYGLQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +       LY A+   D SL EINPL++ K GR+  LD+KI+FD NAL+RH
Sbjct: 171 LGLEGEQFRNAVTFIIALYNAYMTIDASLAEINPLVVTKEGRVLALDAKINFDGNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD +EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KNFLELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  + V   FKII SD +V+ IL+NIFGGI+RCD +  GI+ A +++ +N+P++
Sbjct: 291 LDVGGGASPETVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIIQAARKIGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N +I  +++ ESGLN+I A  L DAA K+  A+
Sbjct: 351 VRLEGTNAEIAQKMLDESGLNLIAANGLHDAAAKVNQAL 389


>gi|92113346|ref|YP_573274.1| succinyl-CoA synthetase subunit beta [Chromohalobacter salexigens
           DSM 3043]
 gi|91796436|gb|ABE58575.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Chromohalobacter salexigens DSM 3043]
          Length = 409

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 199/397 (50%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+KG  + +   A  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 22  MNLHEYQSKQLFADYGLPVSKGFAVDTPEEAAEACKKIGGDKWVVKAQVHAGGRGKA--- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +   + LG  L+T QT   G  V  + VE+  DI  ELYL
Sbjct: 79  -------GGVKLVESPADAKAFAEQWLGKNLVTFQTDEKGQPVAKILVENCTDIANELYL 131

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 132 GAVVDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQARELAFALGLE 191

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD++LLEINPL+I   G L  LD+KI  D NALYRH D+Q
Sbjct: 192 GAQIKQFTKIFLGLAKLFQEKDLALLEINPLVITDEGNLHCLDAKIGLDGNALYRHPDLQ 251

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 252 AMRDPSQEDEREAHAQEWELNYVALEGNIGCMVNGAGLAMGTMDIIKLNGGQPANFLDVG 311

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SVK +L+NIFGGI+RCD++ +GI+ AV++V +N+P+V+RLE
Sbjct: 312 GGATEERVGEAFKIILSDDSVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLE 371

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G   +A SGLN+I A  L DAAQ++V A +G
Sbjct: 372 GNNAELGAEKLASSGLNIIAATSLTDAAQQVVKAAEG 408


>gi|66045252|ref|YP_235093.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae B728a]
 gi|75502458|sp|Q4ZUW7|SUCC_PSEU2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|63255959|gb|AAY37055.1| Succinyl-CoA synthetase, beta subunit [Pseudomonas syringae pv.
           syringae B728a]
 gi|330899190|gb|EGH30609.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330940363|gb|EGH43468.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330951686|gb|EGH51946.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae Cit 7]
 gi|330973464|gb|EGH73530.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330980735|gb|EGH78838.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 388

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDANVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|330811084|ref|YP_004355546.1| succinate--CoA ligase (ADP-forming) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327379192|gb|AEA70542.1| Succinate--CoA ligase (ADP-forming) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 388

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+ G  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSTGYAVDTPEAAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|322420765|ref|YP_004199988.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M18]
 gi|320127152|gb|ADW14712.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M18]
          Length = 389

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 211/391 (53%), Positives = 265/391 (67%), Gaps = 10/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKA+LRK+ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V    R++LG TL T QTGP G  V+ V VE+G +I  ELY+
Sbjct: 52  -GGRGKGGGVKLARSSSEVQMIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIANELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T      +   L L+
Sbjct: 111 SLLVDRGTSRVTIMASTEGGMDIEEVAARTPEKIFTEAVDPLVGLTPFQCRKIAFSLGLR 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +  NLY  F   D SLLEINPL++   G L  LD+K  FDDNAL+RHL I 
Sbjct: 171 GKLTNKAVKVLSNLYTTFIACDCSLLEINPLVVTAEGDLLALDAKFGFDDNALFRHLQIG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  E+EA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DMRDFDEEDPNEVEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A ++V I +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G NV++G RL+AESGLN++ A  + D AQKI
Sbjct: 351 GTNVELGKRLLAESGLNIVAADGMADGAQKI 381


>gi|145219368|ref|YP_001130077.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Prosthecochloris vibrioformis DSM 265]
 gi|189081768|sp|A4SDL6|SUCC_PROVI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145205532|gb|ABP36575.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 391

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/399 (48%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A+ A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAHSPEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +       +++G+TL+T QTGP G  V  + VE+G +I R
Sbjct: 61  A----------GGVKLAKSPEEAYEIASQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIDR 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE+VA++ P ++ K+ +DPL G+           
Sbjct: 111 EFYVGITLDRATSQNVLMISTEGGMEIEKVAEETPDRLLKIQVDPLFGLQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+          +LYKA+   D +L EINPL++ K GR+  LD+KI+FD NALYRH
Sbjct: 171 LGLEGEQFRSAVSFIMSLYKAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD++EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMDII+L GG PANF
Sbjct: 231 KDFLELRDITEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A K++ +N+P++
Sbjct: 291 LDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N DI  +++ ESGLN+I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNADIAQKMLDESGLNLIAADGLKDAAQKVTEAL 389


>gi|172057900|ref|YP_001814360.1| succinyl-CoA synthetase subunit beta [Exiguobacterium sibiricum
           255-15]
 gi|226734953|sp|B1YIL7|SUCC_EXIS2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|171990421|gb|ACB61343.1| succinyl-CoA synthetase, beta subunit [Exiguobacterium sibiricum
           255-15]
          Length = 386

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LLR Y VPV  G+   +V  A  A + L GP+ VVK+QIHAGGRGK    
Sbjct: 1   MNVHEYQAKELLRSYGVPVPNGIAAFTVEEAVDAAEQLSGPIKVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V     E+LG TL+T QTGP G  +  + VE+G  I +E YL
Sbjct: 58  -------GGVKLAKSQEEVKEFATELLGKTLVTHQTGPEGKVIQRLLVEEGCAIDKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +G V  + S++GGMDIEEVA+  P+KI K ++DP +G+ +     L   + + 
Sbjct: 111 GIVLDRVTGRVVIMGSSEGGMDIEEVAEATPEKIIKEVVDPAVGLQAFQARKLAFAMGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY  F DKD S+ EINPL+  K+G +  LD+K++FD NALYRH D+ 
Sbjct: 171 VKLVNKFVGMVTKLYTFFVDKDCSIAEINPLVTTKDGDVLALDAKLNFDSNALYRHADVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED RE+EA +++L+YIALDGNIGC+VNGAGLAMATMDIIK + G PANFLDVG
Sbjct: 231 ALRDETEEDPREVEASKNDLNYIALDGNIGCLVNGAGLAMATMDIIKHFSGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK+I SD +VKGI +NIFGGIM+CDV+ +GI++A KEV + +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKLILSDENVKGIFVNIFGGIMKCDVIAEGIVAATKEVGLELPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +++ +SGL +  A  + D A+KI   VK
Sbjct: 351 GTNVDAGKQILKDSGLAITAATSMADGAEKIAALVK 386


>gi|237749081|ref|ZP_04579561.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           OXCC13]
 gi|229380443|gb|EEO30534.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           OXCC13]
          Length = 388

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 209/397 (52%), Positives = 272/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G    SV  A  A K L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYGVTTPRGFPCFSVDEAVDAAKKLGGNVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     EILG TL+T QTGP G  V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRKYASEILGMTLVTHQTGPEGRLVKRLLIEEGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +  VA +AS++GGM+IE+VA+D P+ I K+ IDP+ G+T  +   +   + + 
Sbjct: 111 GMVVDRATQRVALMASSEGGMNIEDVARDTPELIHKVFIDPVKGLTDAEGEDIARKIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +       LYKAF + D SL EINPLI   + R+  LD+K +FD NA+YRH +IQ
Sbjct: 171 EAAVKETCKFMQGLYKAFVETDASLAEINPLIRTGDNRVIALDAKFNFDSNAMYRHPEIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EE+  EI+A + +L+YI+LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG
Sbjct: 231 EYRDLDEENPDEIQASKFDLTYISLDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ S+  VK IL+NIFGGIMRCDV+ +GI++A K+V + +PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIMLSNPDVKAILVNIFGGIMRCDVIAEGIVAAAKQVSLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  ++A+SGL +I+A  + DAAQK V+A KG
Sbjct: 351 GTNVDQGKEILAKSGLPIISASGMADAAQKAVNAAKG 387


>gi|294011145|ref|YP_003544605.1| succinyl-CoA synthetase beta chain [Sphingobium japonicum UT26S]
 gi|292674475|dbj|BAI95993.1| succinyl-CoA synthetase beta chain [Sphingobium japonicum UT26S]
          Length = 399

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 231/396 (58%), Positives = 289/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL KY  P+A G    SV  A  A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAKYGAPIAAGYAAFSVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  +L  V +   ++LG+TL+T QTG  G +VN +YV DGADI +E YL
Sbjct: 61  ELGPDAKGGVRLAFNLDEVKAHAADMLGNTLVTIQTGEAGKQVNRLYVTDGADIAKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR +G VAF+ ST+GGMDIEEVA   P+KI    +DP  G       ++   LEL 
Sbjct: 121 ALLVDRATGRVAFVVSTEGGMDIEEVAHSTPEKIHTFAVDPATGFMPHHGRAVAAALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY+AF   D S +EINPL + + G L VLD+K+ FD NAL+RH DI 
Sbjct: 181 GDQAKQAAKVASSLYEAFLATDASQIEINPLAVTQQGNLLVLDAKVGFDGNALFRHKDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED+ E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ELRDLTEEDAAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII  D +VKGIL+NIFGGIM+CD++  GI++A K+V +++PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIADGIVAAAKDVNLSVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G  ++A SGL ++ A DL DAA+KIV  V+
Sbjct: 361 GTNVQQGKDILAASGLAIVPADDLGDAARKIVAEVR 396


>gi|73662830|ref|YP_301611.1| succinyl-CoA synthetase subunit beta [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|82582273|sp|Q49X32|SUCC_STAS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|72495345|dbj|BAE18666.1| succinyl-CoA synthetase beta subunit [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 388

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+ R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAIFRSMGVAVPEGRVAYTAEEAVEKAKELDSKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G DI +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCDIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP++G+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLAPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++         +LY  F +KD S++EINPL+    G +  LD+K++FDDNAL++H DIQ
Sbjct: 171 KESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIM+CD++ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDENVKGIFVNIFGGIMKCDIIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  ++ ESGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVERGKEILKESGLAIEPAATMAEGAQKIVKLVK 386


>gi|229589340|ref|YP_002871459.1| succinyl-CoA synthetase subunit beta [Pseudomonas fluorescens
           SBW25]
 gi|259511788|sp|C3K6N0|SUCC_PSEFS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229361206|emb|CAY48070.1| succinyl-CoA synthetase beta chain [Pseudomonas fluorescens SBW25]
          Length = 388

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAEETPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|319780726|ref|YP_004140202.1| succinyl-CoA synthetase subunit beta [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166614|gb|ADV10152.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 397

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 265/397 (66%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KALL+ +  PVA+GV +     AE+A K LPGPLYVVKSQIHAGGRGKG+F 
Sbjct: 1   MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAAKALPGPLYVVKSQIHAGGRGKGKFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++  E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVADVVANANEMLGNTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G +AF+ ST+GGMDIE VA D P+KI  + IDP  GVTS D+ +L   L+L 
Sbjct: 121 SILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKIITVAIDPEKGVTSADLKALNGALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF DKDMSLLE+NPLI+MKNGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GDAAKDGDTLFPILYKAFVDKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT D +VKGILINIFGGIM+CD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITRDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G ++I +SGLNV++A DLDDAA+KIV AVKG
Sbjct: 361 GTNAELGKKIINDSGLNVVSADDLDDAAKKIVAAVKG 397


>gi|116049533|ref|YP_791663.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|122258642|sp|Q02K73|SUCC_PSEAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115584754|gb|ABJ10769.1| succinyl-CoA synthetase beta subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 388

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 272/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K+ IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKVTIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|163752206|ref|ZP_02159408.1| succinyl-CoA synthetase subunit beta [Shewanella benthica KT99]
 gi|161327887|gb|EDP99065.1| succinyl-CoA synthetase subunit beta [Shewanella benthica KT99]
          Length = 388

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVDIETVAENTPELIHKAIIDPLTGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KIS D NALYR   I+
Sbjct: 171 PTQMKQFIKIFMGLAKMFEDHDFALLEINPLVITTEGNLHCLDGKISIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+++RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A S L++I A  L DAAQ++V A +G
Sbjct: 351 GTNAELGREVLASSNLDIIAATSLTDAAQQVVKAAEG 387


>gi|260464173|ref|ZP_05812366.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
 gi|259029976|gb|EEW31259.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 397

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 264/397 (66%), Positives = 328/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KALL+ +  PVA+GV +     AE+A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQGKALLKSFGAPVAEGVPVFKADEAEAAAQALPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++  E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ D+ +L   L+L 
Sbjct: 121 SILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIITVAIDPEKGVTAADLKALNTALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDMSLLE+NPLI+MKNGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GDAANDGNTLFPILYKAFVEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT D +VKGILINIFGGIM+CD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITKDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G ++I +SGLNV++A DLDDAA+KIV AVKG
Sbjct: 361 GTNAELGKKIINDSGLNVVSADDLDDAAKKIVSAVKG 397


>gi|115522327|ref|YP_779238.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
           BisA53]
 gi|122297981|sp|Q07UX6|SUCC_RHOP5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115516274|gb|ABJ04258.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 399

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 235/396 (59%), Positives = 304/396 (76%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+ + V ++KGV I     AE+A K LPGP++VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLQPFGVSLSKGVAILKASEAEAAAKQLPGPVWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A S+GGVR+  S+  V    +E+LG+TL+T QTGP G +VN +Y+E+G+ I +E YL
Sbjct: 61  EASAGSQGGVRLAKSIDEVKQFAQEMLGATLVTLQTGPAGKQVNRLYIEEGSAIDKEFYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V+F+ ST+GGM+IE+VA D P+KI    +DP  G+       +   L L 
Sbjct: 121 SLLVDRATSRVSFVVSTEGGMNIEDVAHDTPEKIISFSVDPATGIMPHHGRIVAKTLGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G L   LY AF  KDM +LEINPL++ K+G LR LD+K+SFD N+LYR  D+ 
Sbjct: 181 GELAKQAGKLTTQLYTAFVAKDMEMLEINPLVLTKDGELRCLDAKMSFDSNSLYRQPDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +H L+YIAL+G IGCMVNGAGLAMAT+DIIKLYG +PANFLDVG
Sbjct: 241 ALRDTTEEDAKEIEASKHELAYIALEGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVK V + +PLV+RLE
Sbjct: 301 GGATEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKTVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +I +SGLNV++A DLDDAAQKIV+AVK
Sbjct: 361 GTNVEEGKAIIRDSGLNVLSADDLDDAAQKIVNAVK 396


>gi|291279313|ref|YP_003496148.1| succinyl-CoA synthase subunit beta [Deferribacter desulfuricans
           SSM1]
 gi|290754015|dbj|BAI80392.1| succinyl-CoA synthase, beta subunit [Deferribacter desulfuricans
           SSM1]
          Length = 393

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 187/399 (46%), Positives = 258/399 (64%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGR 58
           MNIHE+QAK + RKY VP  +G V      A  A + L G   ++VVK+QIHAGGRGK  
Sbjct: 1   MNIHEHQAKEIFRKYGVPTPRGFVAFKPENAVKAAQQLGGDLDVWVVKAQIHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  S + V    +++LGS L+T QTGP G  V+ +Y+E+G +I +E 
Sbjct: 60  ---------GGVKLARSTEEVGLIAKQMLGSKLVTHQTGPEGKVVHRIYIEEGVNIEKEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL +++DR+  M   +AS++GG++IEEVA   P+KI K+ I+P IG        L   L 
Sbjct: 111 YLGMVLDRSLEMPVMMASSEGGVEIEEVAARSPEKIIKVAINPTIGFQGFHGRKLAFGLG 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L  +           +Y  + D D +L+EINPL++ K G+   LD+K+SFDDNALYR  +
Sbjct: 171 LPRELVNKFISFAQAIYNVYMDYDANLIEINPLVLTKEGKFIALDAKMSFDDNALYRQPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD++EE+  EIEA ++ LSY+ LDGN+GCMVNGAGLAMATMDIIK  GG PANFLD
Sbjct: 231 ILAMRDLTEEEPTEIEAAKYGLSYVKLDGNVGCMVNGAGLAMATMDIIKHEGGRPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + VA  F+II  D +VK I +NIFGGI+RCD +  GI+ A K  ++N+P+V+R
Sbjct: 291 VGGGASAETVAKGFEIILRDPNVKSIFVNIFGGIVRCDRVANGIIEATKATQVNVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVK 396
           L+G N +    ++  SG+  +I A DL D A+K V A +
Sbjct: 351 LDGTNAEEAAEILNNSGIKQLIAATDLKDGARKAVEAAE 389


>gi|158319672|ref|YP_001512179.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|189046877|sp|A8MM16|SUCC_ALKOO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|158139871|gb|ABW18183.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus oremlandii
           OhILAs]
          Length = 386

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 221/396 (55%), Positives = 283/396 (71%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y VPV +G VI  V  A+ A   +   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKELLRDYGVPVPRGQVIYDVRDAQRAAWHIESDIAVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V    RE+LG TL+T QTG  G  V  + +E+G +I +E Y+
Sbjct: 58  -------GGVKIAKSITEVEQFSRELLGKTLVTHQTGQEGRVVKAILIEEGCEIYKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  +DR +  +A IAS +GGMDIEEVA + P KI K +IDPLIG+T      +C  L + 
Sbjct: 111 AFTLDRENSKIALIASEEGGMDIEEVAANRPDKILKEIIDPLIGLTDFQGRRVCFNLNID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLY+ F +KD SLLEINPL+I KN R+  LD+KI+FD N LYR+ D+ 
Sbjct: 171 GSLINDTVELMKNLYRCFIEKDCSLLEINPLVITKNNRVMALDAKINFDGNGLYRNEDVL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD++EED +EIEA ++NLSYI+LDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 KLRDLNEEDEKEIEASKYNLSYISLDGNIGCMVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII SD  VKGI +NIFGGIM+CDV+ KGI++A  EVK+N+PLV+RLE
Sbjct: 291 GGASEEKVMNAFKIILSDPKVKGIFVNIFGGIMKCDVIAKGIVNAANEVKLNVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++ +S LN++TA  + D A+KIV  +K
Sbjct: 351 GTNVELGKEILNQSNLNIVTATTMADGAKKIVKLIK 386


>gi|241764840|ref|ZP_04762845.1| succinyl-CoA synthetase, beta subunit [Acidovorax delafieldii 2AN]
 gi|241365635|gb|EER60359.1| succinyl-CoA synthetase, beta subunit [Acidovorax delafieldii 2AN]
          Length = 386

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 204/396 (51%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V     +ILG  L T QTGP G +V  +Y+EDGADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKTIDDVKKLAGDILGMQLKTHQTGPEGQKVRRLYIEDGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+T++    +   + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHATPEKIITEYIDPLTGITADQSKKIAAAIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     DLF  LYK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|77457844|ref|YP_347349.1| succinyl-CoA synthetase subunit beta [Pseudomonas fluorescens
           Pf0-1]
 gi|123605427|sp|Q3KFU6|SUCC_PSEPF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77381847|gb|ABA73360.1| succinyl-CoA synthetase beta chain [Pseudomonas fluorescens Pf0-1]
          Length = 388

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+ G  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSTGFAVDTPEAAAEACDKIGGNEWVVKAQVHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|13473641|ref|NP_105209.1| succinyl-CoA synthetase subunit beta [Mesorhizobium loti
           MAFF303099]
 gi|21264043|sp|Q98EC5|SUCC_RHILO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|14024391|dbj|BAB50995.1| succinyl-coA synthetase beta chain [Mesorhizobium loti MAFF303099]
          Length = 397

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 264/397 (66%), Positives = 329/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KALL+ +  PVA+GV +     AE+A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAARALPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V+++  E+LG TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G +AF+ ST+GGMDIE VA D P+K+  + IDP  GVT++DV  L   L+L 
Sbjct: 121 SILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAIDPERGVTADDVKKLNAALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DGG LFP LYKAF +KDMSLLE+NPLI+MKNGRLRVLD+K+SFD+NAL+RH D+ 
Sbjct: 181 GDAAKDGGTLFPILYKAFIEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT D +VKGILINIFGGIM+CD++ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITKDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G ++I +SGLNV++A DLDDAA+KIV AVKG
Sbjct: 361 GTNAELGKKIINDSGLNVVSADDLDDAAKKIVAAVKG 397


>gi|71736715|ref|YP_274207.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|123636987|sp|Q48K68|SUCC_PSE14 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71557268|gb|AAZ36479.1| succinyl-CoA synthetase, beta subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 388

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE    I +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTHIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|254480793|ref|ZP_05094040.1| succinate-CoA ligase, beta subunit subfamily [marine gamma
           proteobacterium HTCC2148]
 gi|214039376|gb|EEB80036.1| succinate-CoA ligase, beta subunit subfamily [marine gamma
           proteobacterium HTCC2148]
          Length = 389

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L   Y +PV+KG  + +   A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFADYGLPVSKGYAVDTPLEAAEAADLIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +       LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKDEIREFASNWLGKNLVTYQTDENGQPVSKILVESCTDIAEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE VA++ P+KI +  +DPL+G        L   L L 
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIETVAEETPEKILRATVDPLVGPQPYQGRELAFQLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L + F DKD++L+EINPL+I   G L  LD+K+  D NALYR   ++
Sbjct: 171 GEQIKQFVKIFMGLAQMFIDKDLALIEINPLVITDEGNLHCLDAKLGVDSNALYRQPQLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDERESHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVALHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGQKVLADSGLNIIAATSLTDAAQQAVKAAGG 387


>gi|308068642|ref|YP_003870247.1| succinyl-CoA synthetase subunit beta (SCS-beta) [Paenibacillus
           polymyxa E681]
 gi|305857921|gb|ADM69709.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Paenibacillus
           polymyxa E681]
          Length = 386

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 205/396 (51%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A +A ++L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPNGKVAYTVEEAVAAAESLGSAITVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   L  V +   EILG  L+T QTGP G  V  + VE+G DI +E Y+
Sbjct: 58  -------GGVKVAKGLDEVRTFASEILGKVLVTHQTGPEGKEVKRLLVEEGCDIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRATGRIVMMASEEGGTEIEEVAAATPEKIFKAVVDPAIGLQVYQARKLAYDINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF DKD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVNKAVKFMLALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  V+GI +NIFGGIM+CD++  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVEGIFVNIFGGIMQCDIIAYGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKQILAESGLNIVAADSMADGAQKIVELVQ 386


>gi|90406989|ref|ZP_01215179.1| succinyl-CoA synthetase subunit beta [Psychromonas sp. CNPT3]
 gi|90311860|gb|EAS39955.1| succinyl-CoA synthetase subunit beta [Psychromonas sp. CNPT3]
          Length = 387

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV KG+   S   A  A  TL G  +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFTEYGLPVPKGIACDSAEQAVDAATTLGGDKWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +     + LG  LIT QT   G  VN + VE  +DI  ELYL
Sbjct: 58  -------GGVKLVKNKNELREFAHQWLGKNLITYQTDEKGQPVNKLLVERCSDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG++IE VA+  P+ I  ++IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRASRRVTFMASTEGGVEIESVAEQTPELIHTVMIDPLVGAQAYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++LLEINPL++     L  LD K++ D NA+YR   + 
Sbjct: 171 GKQIGQFTKIFLGLSKMFHEKDLALLEINPLVVTATDDLICLDGKVTIDSNAMYRQKALF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED+REI A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI++L+GG PANFLDVG
Sbjct: 231 DMNDTSQEDAREIHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVQLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD+ V+ +L+NIFGGI+RCD++  G++ AV+EV +++P+++RLE
Sbjct: 291 GGATKERVTEAFKIILSDTKVEAVLVNIFGGIVRCDLIADGVIGAVQEVGVSVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES LN+I A  L DAA++ V AV G
Sbjct: 351 GNNAELGRKILAESDLNIIAATSLTDAAEQAVKAVGG 387


>gi|254786519|ref|YP_003073948.1| succinyl-CoA synthetase subunit beta [Teredinibacter turnerae
           T7901]
 gi|259511792|sp|C5BL83|SUCC_TERTT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|237686221|gb|ACR13485.1| putative succinyl-CoA synthetase beta chain [Teredinibacter
           turnerae T7901]
          Length = 389

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 199/397 (50%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KGV   +   A SA   L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGVAAETPAEAASAAGILGGDTWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +    ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKAEIEEFAKQWLGKNLVTYQTDENGQPVSRILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+KI K +IDPL G        L   L L+
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPEKILKAIIDPLAGAQPYQARDLAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++LLEINPL+I K G L  LD+KI+ D NALYR   ++
Sbjct: 171 GKQIKQFTQIFLGLAKMFKEKDLALLEINPLVITKEGDLHCLDAKINIDGNALYRQPALK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SV  +LINIFGGI+RCD++ +G++ AV+EV + IP+V RLE
Sbjct: 291 GGATKERVVEAFKIILSDESVSAVLINIFGGIVRCDLIAEGVIGAVEEVGVKIPVVCRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAA+++V A KG
Sbjct: 351 GNNAELGAKVLADSGLNIIAATSLTDAAEQVVKAAKG 387


>gi|296282965|ref|ZP_06860963.1| succinyl-CoA synthetase subunit beta [Citromicrobium bathyomarinum
           JL354]
          Length = 399

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 225/395 (56%), Positives = 292/395 (73%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL ++ + + KG+   +V  A +  K LPGPLYVVK+QIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKELLAEHGIAIPKGIPAMNVEEAVAGAKQLPGPLYVVKAQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V    RE+LG+TL+T QTG  G  VN +YV DG DI +E YL
Sbjct: 61  ELGPDAKGGVRLAKSIEEVEEAAREMLGNTLVTVQTGDAGKEVNRLYVTDGVDIAKEYYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR SG VA +AST+GGMDIE VA + P++I  + IDP  G       ++   L+L+
Sbjct: 121 ALLVDRASGEVAIVASTEGGMDIETVAHETPERITTITIDPAQGFMPHHGRAVAFALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+AF   D ++LEINPL+  ++G L VLD+K+SFD NA+YR  +++
Sbjct: 181 GDLNKQAQKLSKQLYEAFLAYDCAMLEINPLVETEDGNLLVLDTKMSFDSNAMYRQKEVE 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRDV+EED  E+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 KLRDVTEEDEAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFK+I  D +V+GIL+NIFGGIM+CDV+  GI++A KEV I +PLV+RLE
Sbjct: 301 GGANKEKVTAAFKLILKDPAVEGILVNIFGGIMKCDVIADGIVAAAKEVNIQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  ++A SGL ++ A DL DAA+KIV  V
Sbjct: 361 GTNVEKGKEILANSGLAIVPADDLGDAAKKIVAEV 395


>gi|319779688|ref|YP_004130601.1| Succinyl-CoA ligase [ADP-forming] beta chain [Taylorella
           equigenitalis MCE9]
 gi|317109712|gb|ADU92458.1| Succinyl-CoA ligase [ADP-forming] beta chain [Taylorella
           equigenitalis MCE9]
          Length = 386

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 191/396 (48%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L+K+ V V +G+   SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILKKFGVNVLRGIPAFSVEEAVKAAEELGGNVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     ++LG  L+T QTGP G +VN + +E+GADI +E YL
Sbjct: 52  -GGRGKGGGVKLAKSIDEVRDLASQMLGMQLVTHQTGPQGQKVNRLLIEEGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR S     +AS++GG++IEEVA + P+KI K+ IDP   V+ E    L   + + 
Sbjct: 111 GIVTDRGSQRNCIMASSEGGVNIEEVAHETPEKIIKVFIDPGHDVSYEQGLELVRGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      DL   LYKA+ + D +L EINPLI   +G++  LD+K +FD NAL RH +I 
Sbjct: 171 SELHDQAIDLIQKLYKAYWETDATLAEINPLIHTGDGKVIALDAKFNFDSNALSRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED  EIEA +++L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 EYRDLDEEDPAEIEASKYDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+    SVK IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLRSDSVKAILVNIFGGIMRCDVIAEGVVAACKAVDLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++AESGL +I+A  + +AA K+V A K
Sbjct: 351 GTNEEQGKKILAESGLPIISADTMAEAATKVVEAAK 386


>gi|222151080|ref|YP_002560234.1| succinyl-CoA synthetase beta subunit [Macrococcus caseolyticus
           JCSC5402]
 gi|254778443|sp|B9EBC7|SUCC_MACCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|222120203|dbj|BAH17538.1| succinyl-CoA synthetase beta subunit [Macrococcus caseolyticus
           JCSC5402]
          Length = 389

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V  G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPNGSVAYTPEEAVEVAKGLKEGVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V S  +E+LG  L+T QTGP G  V  + VE+G DI +E YL
Sbjct: 58  -------GGVKIAKSLDEVESYAKELLGKVLVTHQTGPEGKEVKRLLVEEGCDIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  + S +GG +IEEVA+  P+KIFK +IDP++G+       L   + + 
Sbjct: 111 GFVLDRATDSVVLMGSEEGGTEIEEVAEATPEKIFKEVIDPVVGLMPYQARRLAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++      +   LY  F  KD S++EINPL+   +G +  LD+KI+FD NAL+R  D+ 
Sbjct: 171 KESVNKAVKIMLGLYDVFMKKDASIIEINPLVTTGDGEVLALDAKINFDANALFRQKDVM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMD I  +GG PANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D  V+GI +NIFGGIM+CDV+ +G+++A KE+++ IPLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDEKVEGIFVNIFGGIMKCDVIAEGVVAAAKELELTIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  ++  SGL +  A  + + AQKIV  VK
Sbjct: 351 GTNVDQGKEILGNSGLAITPASTMAEGAQKIVELVK 386


>gi|253573508|ref|ZP_04850851.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847036|gb|EES75041.1| succinyl-CoA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 386

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 212/395 (53%), Positives = 274/395 (69%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V +G V  +V  A  A K L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPEGRVAFTVEEAVEAAKALGTPVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +  +E+LG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYAQELLGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G V  +AS +GG +IEEVA   P+KIFK +IDP +G+TS     L   + + 
Sbjct: 111 GVVVDRGTGRVTMMASEEGGTEIEEVAAATPEKIFKEVIDPAVGLTSFQARRLAYSINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF DKD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVGKATQFMMALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ALRDLEEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD+ VKGI +NIFGGIM+CDV+  GI+ A K+V ++ PLV+RLE
Sbjct: 291 GGATAEKVTEAFKIILSDAKVKGIFVNIFGGIMKCDVIASGIVEAAKQVGLDRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++AESGL +++A  + D AQKIV  V
Sbjct: 351 GTNVDLGKQILAESGLAIVSADSMADGAQKIVSLV 385


>gi|15596785|ref|NP_250279.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa PAO1]
 gi|107101021|ref|ZP_01364939.1| hypothetical protein PaerPA_01002051 [Pseudomonas aeruginosa PACS2]
 gi|218892455|ref|YP_002441322.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa
           LESB58]
 gi|296390037|ref|ZP_06879512.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa PAb1]
 gi|313106602|ref|ZP_07792828.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa 39016]
 gi|12230960|sp|P53593|SUCC_PSEAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734974|sp|B7UVD3|SUCC_PSEA8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|9947552|gb|AAG04977.1|AE004587_1 succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa PAO1]
 gi|218772681|emb|CAW28466.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa LESB58]
 gi|310879330|gb|EFQ37924.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa 39016]
          Length = 388

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|49088588|gb|AAT51586.1| PA1588 [synthetic construct]
          Length = 389

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|254502561|ref|ZP_05114712.1| succinyl-CoA synthetase, beta subunit subfamily [Labrenzia
           alexandrii DFL-11]
 gi|222438632|gb|EEE45311.1| succinyl-CoA synthetase, beta subunit subfamily [Labrenzia
           alexandrii DFL-11]
          Length = 399

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 269/397 (67%), Positives = 330/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++  PVA+GV I S   AE+A K+LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKAVLKEFGAPVAEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL A++KGGVR+  SL  V +   E+LG+TL+T QTG  G  VN +Y+EDGADI RELYL
Sbjct: 61  ELDAEAKGGVRLAFSLDEVKAHAAEMLGNTLVTAQTGDAGKVVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G  AF+ ST+GGMDIE VA++ P+KI  L IDP  GVT  D A LCD LEL 
Sbjct: 121 SILVDRTVGRPAFVVSTEGGMDIEAVAEETPEKIITLPIDPDTGVTEADAAKLCDALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP L+KAF +KDM+LLE+NPLI+MK+G+LRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GAARQDGFKLFPILHKAFVEKDMALLEVNPLIVMKDGQLRVLDAKVSFDGNALFRHDDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIITSD +VKGIL+NIFGGIMRCD++ +G+L+AV EV + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDIIAEGVLAAVTEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G ++I+ESG+NVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVELGKKIISESGMNVIAADDLDDAAQKIVKAVKG 397


>gi|281208774|gb|EFA82949.1| succinate-CoA ligase [Polysphondylium pallidum PN500]
          Length = 441

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 186/395 (47%), Positives = 264/395 (66%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQA+ ++R Y +    G V  +   AE   + L     VVK+QI AGGRGKG F 
Sbjct: 31  LNVHEYQAQKMMRTYGIECPNGNVADTPEEAEKLAEVLNTQDLVVKAQILAGGRGKGVF- 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV + +S + V +  +++LG TL+TKQTGP G  VN +Y+ +   + RE+Y 
Sbjct: 90  --SSGLKGGVHICNSPEEVKNYAKKMLGYTLVTKQTGPDGKVVNKIYIAERHYLRREMYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    IAS +GG+DIE VA++ P  IF   ID   GV  E  A L   + + 
Sbjct: 148 AILMDRKTGGPVMIASPEGGVDIETVARENPSAIFVEPIDIFKGVQPEQTARLAQKIGIS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINPL    +G +  +D+K++FDDNA +R  ++ 
Sbjct: 208 PKNISKAQDQMQKLYNFFIKHDCTLVEINPLAETSSGDVLCMDAKLNFDDNAAFRQKEVF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED RE++A +++L+YI LDG+IGC+VNGAGLAMATMDIIK YGG+PANFLDVG
Sbjct: 268 DLRDRTQEDPREVKASEYDLNYIGLDGSIGCLVNGAGLAMATMDIIKHYGGSPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD+ VK IL+NIFGGIM+CD++  GI++AVKE+ I  PLV+RL+
Sbjct: 328 GGATQKQVTEAIKLISSDTKVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+   +++ +SGL +I A DLD+AA+K V   
Sbjct: 388 GTNVESAKKIMEDSGLRLIAADDLDEAAEKAVRIA 422


>gi|160896318|ref|YP_001561900.1| succinyl-CoA synthetase subunit beta [Delftia acidovorans SPH-1]
 gi|226734942|sp|A9BQA5|SUCC_DELAS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|160361902|gb|ABX33515.1| succinyl-CoA synthetase, beta subunit [Delftia acidovorans SPH-1]
          Length = 386

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +   +ILG  L+T QTGP G +V  +Y+EDGADI +E YL
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKALAGQILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  + +DPL+G+T      L   + + 
Sbjct: 111 SCVTDRGTQKVAFIASSEGGMDIEEVAHSTPEKIITIFVDPLVGLTQAQGEELAKGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LYK + D D SL+EINPL     G +  LD+K +FD NAL+R  +I 
Sbjct: 171 ADSTAQFIDICQKLYKCYMDTDASLVEINPLNRDSKGNVVALDAKFNFDANALFRLPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKIVEAVK 386


>gi|329295938|ref|ZP_08253274.1| succinyl-CoA synthetase subunit beta [Plautia stali symbiont]
          Length = 388

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE QAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHECQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRTFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVIFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLATMFLERDLAMVEINPLVITKQGNLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA + +V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKKRVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNMPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|254294601|ref|YP_003060624.1| succinyl-CoA synthetase subunit beta [Hirschia baltica ATCC 49814]
 gi|254043132|gb|ACT59927.1| succinyl-CoA synthetase, beta subunit [Hirschia baltica ATCC 49814]
          Length = 398

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 263/397 (66%), Positives = 315/397 (79%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L+++  PVA GV I S   A +A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKAVLKEFGAPVADGVAIFSADEAAAAADKLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S + VIS+  ++LG+TL+T QTGP G +VN +Y+EDGADI  ELYL
Sbjct: 61  EAEAGEKGGVRLAFSKEDVISNAAQMLGNTLVTHQTGPAGKQVNRLYIEDGADIKTELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG  AF+AST+GGMDIEEVA+  P+KI  + IDP+ GVT     SLCD L L+
Sbjct: 121 SLLVDRASGQPAFVASTEGGMDIEEVAESTPEKILTITIDPVAGVTDAVAESLCDALGLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  L   LYKAF +KDM +LE+NPLI+M+N RLRVLD+K+SFD NAL+RH DI 
Sbjct: 181 GTAREDGIALSRILYKAFTEKDMDMLEVNPLIVMENERLRVLDAKMSFDGNALFRHPDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA + +L+YIAL+G IGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ELRDKTEEDEKEIEASEWDLAYIALEGTIGCMVNGAGLAMATMDIIKLYGEEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +KVAAAFKII  D +VKGIL+NIFGGIM+CDV+ +G+L AVKE  + +PLV+RLE
Sbjct: 301 GGANAEKVAAAFKIIMKDPAVKGILVNIFGGIMKCDVIAEGVLQAVKETNLAVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  +IA SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTNVEKGKEIIANSGLNVIPANDLDDAAQKIVAAVKG 397


>gi|221126321|ref|XP_002165714.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
 gi|260221892|emb|CBA30910.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 387

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     EILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKRLASEILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T+E    +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITTEQSKKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     D+F  LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDIFAKLYKCYMDTDASLVEINPLNCDSKGNVMALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AYRDLDEEDAAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDAIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNDKVKAILVNIFGGIMKCDTIATGVITACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL +I+A  + +AAQK+V AVKG
Sbjct: 351 GTNEELGKKMLAESGLPIISADSMAEAAQKVVAAVKG 387


>gi|152985102|ref|YP_001349040.1| succinyl-CoA synthetase subunit beta [Pseudomonas aeruginosa PA7]
 gi|189081769|sp|A6V7K5|SUCC_PSEA7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150960260|gb|ABR82285.1| succinyl-CoA synthetase beta chain [Pseudomonas aeruginosa PA7]
          Length = 388

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGGEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|332306151|ref|YP_004434002.1| succinyl-CoA synthetase, beta subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173480|gb|AEE22734.1| succinyl-CoA synthetase, beta subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 389

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G    +  AA  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSEGYAAETPQAAVEAADRIGGTEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKNKDEIKAFAQKWLGQNLVTYQTDEAGQPVSKILVESCTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD++L+E+NPL+I  +G L  LD+K++ D NA YR   +Q
Sbjct: 171 GVQIKQFTQIFMGLAKLFEEKDIALIEVNPLVIKDDGNLHCLDAKVAMDSNAAYRQPKLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAA+++V A  G
Sbjct: 351 GTNAELGREVLANSGLDIIAASSLTDAAKQVVKAAGG 387


>gi|222150041|ref|YP_002550998.1| succinyl-CoA synthetase subunit beta [Agrobacterium vitis S4]
 gi|254778425|sp|B9JTS8|SUCC_AGRVS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|221737023|gb|ACM37986.1| succinyl-CoA synthetase beta chain [Agrobacterium vitis S4]
          Length = 398

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 267/396 (67%), Positives = 329/396 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA+GV I S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSFGAPVAEGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V S + E+LG+TL+T QTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAFSIDEVKSHVAEMLGNTLVTNQTGPAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ ++ +L   L L+
Sbjct: 121 SLLVDRAVGQVAFVVSTEGGMDIETVAHDTPEKIISVAIDPEAGVTAANLEALTAALLLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A+ D   LFP LYKAF +KDM+LLE+NPLI+MKNGR+RVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GEAKADAEKLFPILYKAFVEKDMALLEVNPLIVMKNGRMRVLDAKMSFDGNALFRHEDVV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDKTEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+L+AVK+V + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKDVGLTVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G ++I ESGLNVI+A DLDDAAQKIV AVK
Sbjct: 361 GTNVELGKKIINESGLNVISADDLDDAAQKIVAAVK 396


>gi|330843612|ref|XP_003293744.1| succinate-CoA ligase (ADP-forming) [Dictyostelium purpureum]
 gi|325075897|gb|EGC29733.1| succinate-CoA ligase (ADP-forming) [Dictyostelium purpureum]
          Length = 436

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 191/398 (47%), Positives = 269/398 (67%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQA+ +++ + +   KG V  +   AE   + L     VVK+QI AGGRGKG F 
Sbjct: 26  LNVHEYQAQKMMKAFGIDCPKGNVADTPEEAEKIAEVLGTQDLVVKAQILAGGRGKGIF- 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV + SS + + +  ++++G TL+TKQTGP G  V+ VY+ +   + +E+Y 
Sbjct: 85  --TSGLKGGVHLCSSPEEIKNYAKQMIGHTLVTKQTGPDGKVVHQVYITERHFLRKEMYF 142

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    +AS QGG+DIE VA+D P  IFK  ID  IGV  E  A L + L   
Sbjct: 143 AILMDRKAGGPVMVASPQGGVDIEAVARDTPSAIFKEPIDINIGVKPEQTARLAEKLGFS 202

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINP     +G +  +D+K++FDDN+ +RH +I 
Sbjct: 203 KKNIEKAQDQMKKLYDFFIKNDCTLVEINPFAETASGEVLCMDAKLNFDDNSSFRHKEIF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE++A +++L+YI L+GNIGC+VNGAGLAMATMDIIKLYGG+PANFLDVG
Sbjct: 263 ALRDKSQEDPREVKAAEYDLNYIGLEGNIGCLVNGAGLAMATMDIIKLYGGSPANFLDVG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD +VK IL+NIFGGIM+CD++  GI++AVKE+ I  PLV+RL+
Sbjct: 323 GGATQKQVQEAIKLISSDPNVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+   +++ ESGL +I A DLD+AA+K V   + V
Sbjct: 383 GTNVESAKKIMEESGLRIIAADDLDEAAKKSVRIAQIV 420


>gi|162148723|ref|YP_001603184.1| succinyl-CoA synthetase beta chain [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545510|ref|YP_002277739.1| succinyl-CoA synthetase subunit beta [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787300|emb|CAP56894.1| putative succinyl-CoA synthetase beta chain [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533187|gb|ACI53124.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 404

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 206/396 (52%), Positives = 276/396 (69%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ + +PV  G V+ S   A  A + +  PL VVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKALLKGFGMPVPDGRVVRSPDEALLAARAMGAPLVVVKAQIHAGGRGAGHFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P   KGGVR+  + +        +L  TL+T+QTG  G  V  +Y+E G DI RELYL
Sbjct: 61  HDPGG-KGGVRLARTPEDAEQAAIAMLDQTLVTRQTGSAGRVVRRLYIEAGCDIGRELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G +  +AS  GGM IE+VA   P++I K  IDP  G++     +L   L+L 
Sbjct: 120 SLLVDRGTGRIVIVASQDGGMAIEDVAAATPERILKEPIDPATGLSDYQARTLAARLDLH 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++      +    Y AF   D +++EINPL++ ++G L  LD+K+SFDDNAL+RH +++
Sbjct: 180 GRSIRAFTTVLRAAYDAFVALDAAIVEINPLVVTRSGDLLALDAKMSFDDNALFRHPELE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED RE EA +H L+Y+ LDG IGCMVNGAGLAMATMDIIK+ G  PANFLDVG
Sbjct: 240 ELRDENEEDPREREAARHGLAYVGLDGTIGCMVNGAGLAMATMDIIKMEGEEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAF+I+ SD  V+GIL+NIFGGIMRCD++   I++A +E  +++PLV+RL 
Sbjct: 300 GGATRERVAAAFRILLSDRKVRGILVNIFGGIMRCDIIADAIVAASRETGLHVPLVVRLA 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G+++++ SGL +I A DL DAA KIV AV+
Sbjct: 360 GTNVEQGHQILSASGLRIIPADDLADAATKIVAAVR 395


>gi|197119591|ref|YP_002140018.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
 gi|197088951|gb|ACH40222.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
          Length = 389

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/395 (54%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKA+LRK+ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    R++LG TL T QTGP G  V+ V VE G +I  ELY+
Sbjct: 52  -GGRGKGGGVKLARTSSEVQMIARDMLGMTLRTHQTGPEGKVVHRVLVECGCNIGSELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T      +   L L+
Sbjct: 111 SLLVDRATSRVTVMASTEGGMDIEEVAAKTPEKIFTEAVDPLVGLTPFQCRKIAFSLGLR 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F +LY  F   D SLLEINPL++   G L  LD+K  FDDNAL+RHL I 
Sbjct: 171 GKLTGKAVKVFTSLYNTFIATDCSLLEINPLVVTAEGELIALDAKFGFDDNALFRHLQIG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED+ EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DMRDFDEEDANEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A ++V I +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G RL+AESGLN++ A  + D AQKIV AV
Sbjct: 351 GTNVELGKRLLAESGLNIVAADGMADGAQKIVRAV 385


>gi|222053358|ref|YP_002535720.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
 gi|221562647|gb|ACM18619.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
          Length = 388

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 208/395 (52%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LR++ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILREFGVPVPDGHVCYNGASAREWAKRLSEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +  R++LG  L T QTGP G  V  V VE+G +I  ELY+
Sbjct: 52  -GGRGKGGGVKLARTADEVRNTARDMLGMILRTHQTGPEGKVVTRVLVENGCNIGTELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF+  I PL+G+T     +L   L L 
Sbjct: 111 SLLVDRATSKVTVMASTEGGMDIEEVAAKTPEKIFREAIAPLVGLTPFQCRNLAFSLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY+ F   D SLLEINPL++ K G L  LD+K  FDDNA++RH  I 
Sbjct: 171 GKLTNKAVKLLQGLYETFIGCDCSLLEINPLVVTKEGDLLCLDAKFGFDDNAVFRHPKIG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  E+EA QH+LSY++L GNIGC+VNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 DMRDYDEEDPNEVEASQHDLSYVSLAGNIGCLVNGAGLAMATMDIIKHSGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A K+V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAAKQVSLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G  +++ SGLN+I A  + DAA KIV AV
Sbjct: 351 GTNVDKGKEILSASGLNIIAADGMADAANKIVQAV 385


>gi|225165681|ref|ZP_03727483.1| Succinate--CoA ligase (ADP-forming) [Opitutaceae bacterium TAV2]
 gi|224800070|gb|EEG18497.1| Succinate--CoA ligase (ADP-forming) [Opitutaceae bacterium TAV2]
          Length = 393

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 272/395 (68%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKAL +KY VP  KG+ + S    ++A+   P    VVKSQIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKALFQKYGVPAPKGIPVKSPAEFKTALAEFPPGPVVVKSQIHAGGRGKGVFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV+   +    +   +++ G+TL+T QTGP G +V+ VY  +   I  E YL
Sbjct: 61  D---GFKGGVKFAQNKDDALEYAKKMFGNTLVTAQTGPAGRKVHTVYFTEACKIRNEYYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT+     +AST+GG++IE+VAK+ P KIFK+LIDP  G+   +V  L   L L 
Sbjct: 118 AILLDRTTSKPVIVASTEGGIEIEKVAKETPDKIFKVLIDPAFGLADFEVRELIFDLGLN 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L  NLY+ F + D S++E+NPL+   + ++  LD+K+SFDDNAL+RH +I 
Sbjct: 178 PAESKNAAKLIKNLYQMFWETDASMVEVNPLVTTMDDQVLALDAKVSFDDNALFRHPEIV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD++EED +EIEA + NLSYIALDGNI C+VNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 238 AYRDLNEEDPKEIEASKFNLSYIALDGNIACLVNGAGLAMSTMDIIKHYGGNPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII  D +VKGI +NIFGGIM C+V+  GI+ AVKE  + +PLV+RLE
Sbjct: 298 GGATKEQVVAAFKIILGDKNVKGIFVNIFGGIMDCNVIATGIVEAVKETGLKLPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +++   + DAAQKIV  V
Sbjct: 358 GNNVAAGKATLASSGLTIVSGDSMADAAQKIVKLV 392


>gi|148266359|ref|YP_001233065.1| succinyl-CoA synthetase, beta subunit [Geobacter uraniireducens
           Rf4]
 gi|146399859|gb|ABQ28492.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           uraniireducens Rf4]
          Length = 387

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 210/395 (53%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LR + VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKGILRSFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +  R++LG  L T QTGP G  V  V VE+G  I RELY+
Sbjct: 52  -GGRGKGGGVKLARTPDEVGNIARDMLGMILSTHQTGPEGKVVTRVLVENGCIIARELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+S  V  +AST+GGMDIEEVA   P+KI+   +DPL+G+T      L   L L+
Sbjct: 111 SLLVDRSSSKVTVMASTEGGMDIEEVAAKTPEKIYMEAVDPLVGLTQFQCRKLAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+  +    +F  LY  F   D SLLEINPL++  +  L  LD+K  FDDNA++RH  I 
Sbjct: 171 GKLVVKAVKMFEGLYTTFIACDCSLLEINPLVVTADSELLALDAKFGFDDNAVFRHPKIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD  EED  E+EA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DLRDYDEEDPNEVEASQHDLSYISLSGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A K+V I +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDRNVKGILVNIFGGIMKCDVIATGVIEAAKQVGIKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G +L+AESGL+++ A  + DAA+KIV AV
Sbjct: 351 GTNVKKGTQLLAESGLDIVAADGMADAARKIVKAV 385


>gi|225848460|ref|YP_002728623.1| succinyl-CoA synthetase subunit beta [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644651|gb|ACN99701.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 388

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 257/395 (65%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK + RKY +PV +G     V  A  A + L     VVK+QIHAGGRGK    
Sbjct: 1   MKVHEHQAKEIFRKYGLPVPRGYPAFDVKEAVEAAEELGTWPVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V     E+LG  L+T QTGP G  V+ +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKLAKSIEEVQQIAAELLGKKLVTFQTGPEGLPVSRLYIEEGTAIDKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+      + S  GGM+IEEVA   P+ I    I+P IG+ S     L   L L 
Sbjct: 111 AITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITHTIEPFIGLRSYHARELALKLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +LF  LYK + + D S++EINPL++ K+G L +LD+KI FDDN L+RH +I 
Sbjct: 171 KNLLNKAANLFMTLYKIYIELDASMVEINPLVLTKDGNLVILDAKIDFDDNGLFRHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++    E+EAK+ NL+YI LDGNI CMVNGAGLAM+TMD IKL GG PANFLDVG
Sbjct: 231 EMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+  ++A AFKII SD +VK I INIFGGI+RCD L +GI++A KEV IN+P+++R+E
Sbjct: 291 GSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGL +ITA  + + A K V A 
Sbjct: 351 GTNVELGKKMLQESGLPLITADTMWEGALKAVEAA 385


>gi|254514204|ref|ZP_05126265.1| succinyl-CoA synthetase beta chain [gamma proteobacterium NOR5-3]
 gi|219676447|gb|EED32812.1| succinyl-CoA synthetase beta chain [gamma proteobacterium NOR5-3]
          Length = 389

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + S  AA  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKRLFAEYGLPVSKGHAVDSPQAAVEAADLIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +       LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKDEIADFASHWLGKNLVTYQTDANGQPVSKILVETCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI + +IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILRAVIDPLTGAQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++L+EINPL+I   G L  LD+KI  D NALYR  D++
Sbjct: 171 GEQIKQFVKIFLGLAKMFQEKDLALIEINPLVITTEGNLHCLDAKIGVDGNALYRQSDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 DMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD  VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDKVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVAVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGRKVLADSGLNIIAATSLTDAAQQAVKAAGG 387


>gi|319892262|ref|YP_004149137.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161958|gb|ADV05501.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 388

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  S   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFSAEEAVEKAKELDTDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+GA+I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVEAYANELLGKVLVTHQTGPEGKEVKRLYIEEGANIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKNPEKIFKETIDPVIGLAPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL++   G +  LDSKI+FDDNAL+RH DI 
Sbjct: 171 KESINKAVKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDSKINFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMD I  + G PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFNGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIMRCD++ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDENVKGIFVNIFGGIMRCDIIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G +++ +SGL +  A  + + AQKIV  V
Sbjct: 351 GTNVKEGKQILKDSGLAIEPANTMAEGAQKIVKLV 385


>gi|109898121|ref|YP_661376.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas atlantica
           T6c]
 gi|123064687|sp|Q15UW6|SUCC_PSEA6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|109700402|gb|ABG40322.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 389

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G    +  AA  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSEGYAAETPQAAVEAADRIGGTEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKNKDEIKAFAQKWLGQNLVTYQTDEAGQPVSKILVESCTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD++L+E+NPL+I  +G L  LD+K++ D NA YR   +Q
Sbjct: 171 GVQIKQFTQIFMGLAKLFEEKDIALIEVNPLVIKDDGNLHCLDAKVAMDSNAAYRQPKLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAA+++V A  G
Sbjct: 351 GTNAELGRDVLANSGLDIIAASSLTDAAKQVVKAAGG 387


>gi|322417830|ref|YP_004197053.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M18]
 gi|320124217|gb|ADW11777.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M18]
          Length = 385

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 193/392 (49%), Positives = 261/392 (66%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +P+ +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILNSFGIPIPRGRVALTADQVERAAKEMGG-RCVVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G TL+T QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQEYAKELFGRTLVTPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     IAS +GGM+IEEVA   P+KI  L IDP +G+ S     +   L L 
Sbjct: 110 SITLDRSTSRYVLIASAEGGMEIEEVASKSPEKIHTLTIDPFLGLRSYQARHIALQLGLT 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLY+   DKD +L+EINPL+I + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVNLIQNLYRVCLDKDCALVEINPLVITRAGWLMAMDAKITFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L G+IGC+VNGAGLAMAT+D++K YGG PANFLDVG
Sbjct: 230 DMMDYSQLDPLEINAGKYDLAYIKLSGSIGCLVNGAGLAMATLDVLKEYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKGI +NIFGGIMRCDV+  GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+ V+ G RL+ ESGLNV  + +L DAA KIV
Sbjct: 350 GSQVEEGKRLLTESGLNVQCSDNLGDAASKIV 381


>gi|332531168|ref|ZP_08407081.1| succinyl-CoA synthetase subunit beta [Hylemonella gracilis ATCC
           19624]
 gi|332039275|gb|EGI75688.1| succinyl-CoA synthetase subunit beta [Hylemonella gracilis ATCC
           19624]
          Length = 386

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIAAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V +   +ILG  L T QTGP G +V  +Y+E+GADI +E YL
Sbjct: 52  -GGRGKGGGVKVAKTVDDVKTLAGQILGMQLKTHQTGPEGQKVRRLYIEEGADIQKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  + +DPL+G T  +   L   + L 
Sbjct: 111 SAVTDRGTQKVAFIASSEGGMDIEEVAHSTPEKIVTIFVDPLVGFTEANGKELAKGINLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LYK + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSLSQFIDICQKLYKCYMDTDASLVEINPLNRDSKGNIVALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A + V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITASRAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKIVAAVK 386


>gi|33593524|ref|NP_881168.1| succinyl-CoA synthetase subunit beta [Bordetella pertussis Tohama
           I]
 gi|33597218|ref|NP_884861.1| succinyl-CoA synthetase subunit beta [Bordetella parapertussis
           12822]
 gi|33601064|ref|NP_888624.1| succinyl-CoA synthetase subunit beta [Bordetella bronchiseptica
           RB50]
 gi|81424751|sp|Q7VVU5|SUCC_BORPE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81426834|sp|Q7W789|SUCC_BORPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81431308|sp|Q7WKM5|SUCC_BORBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|33572880|emb|CAE42816.1| Succinyl-CoA synthetase, beta chain [Bordetella pertussis Tohama I]
 gi|33573645|emb|CAE37930.1| Succinyl-CoA synthetase, beta chain [Bordetella parapertussis]
 gi|33575499|emb|CAE32577.1| Succinyl-CoA synthetase, beta chain [Bordetella bronchiseptica
           RB50]
 gi|332382932|gb|AEE67779.1| succinyl-CoA synthetase subunit beta [Bordetella pertussis CS]
          Length = 386

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ V V +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L+T QTGP G +V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR +  V  +AS++GGMDIEEVA   P+KI K+ +DP  G+T  + A L   + + 
Sbjct: 111 GIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +       F  LYKA+ D D SL EINPLI+  +G +  LD+K +FD NAL+RH +I 
Sbjct: 171 EASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SVK IL+NIFGGIMRCDV+ +G+++A K V +N+PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I+A  + +AA K+V AVK
Sbjct: 351 GTNEELGKKMLAESGLPIISADTMAEAATKVVAAVK 386


>gi|237746927|ref|ZP_04577407.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           HOxBLS]
 gi|229378278|gb|EEO28369.1| succinyl-CoA synthetase subunit beta [Oxalobacter formigenes
           HOxBLS]
          Length = 388

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 203/397 (51%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G    +V  A  A + L G L+VVK+QIHA         
Sbjct: 1   MNIHEYQGKQILRKYGVTTPRGFPCFTVDEAVEAAEKLGGNLWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     EILG TL+T QTGP G  V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSIDEVRKYATEILGMTLVTHQTGPEGRVVKRLLIEEGADIKKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +  VA +AS++GGM+IE+VA+D P+ I K+ IDP  G+T  +   +   + + 
Sbjct: 111 GMVVDRATQRVALMASSEGGMNIEDVARDTPELIHKVFIDPASGLTDAEGEDIARKIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +       LYKAF + D SL EINPL++  + R+  LD+K +FD NALYR  +IQ
Sbjct: 171 EAAVKETCKFMQGLYKAFVETDASLAEINPLVLTGDNRVIALDAKFNFDSNALYRQPEIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EE+  EI+A + +L+YI+LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG
Sbjct: 231 AMRDLDEENPDEIQASKFDLTYISLDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ S+  VK IL+NIFGGIMRCDV+ +GI++A K+V++ +PL++RLE
Sbjct: 291 GGATTEKVTEAFKIMLSNPDVKAILVNIFGGIMRCDVIAEGIVAAAKQVELKVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G  ++A+SGL +I+A  + DAA K V+A KG
Sbjct: 351 GTNVDQGKEILAKSGLPIISASGMADAALKAVNAAKG 387


>gi|224373252|ref|YP_002607624.1| succinyl-CoA synthetase subunit beta [Nautilia profundicola AmH]
 gi|254778446|sp|B9L5I6|SUCC_NAUPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|223589963|gb|ACM93699.1| succinyl-CoA synthetase beta chain [Nautilia profundicola AmH]
          Length = 390

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 194/388 (50%), Positives = 255/388 (65%), Gaps = 11/388 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + RKY VP  +G V  +   A    + L G L+VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEIFRKYGVPTPRGGVAFTGPEARRVAEELGGNLWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     E+LG TL+T QTGP G  V  VY+E+GADI  ELYL
Sbjct: 58  -------GGVKLAKSLDEVEKIAEEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKDELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AST+GGM+IEEVA+  P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIIKVAIDPAIGFQPFHARKLAFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              + +       LY  + D D  ++EINPLI   +G+   LD+K+ FDDNALY+H +I 
Sbjct: 171 KDEQREFIKFASALYNVYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYKHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EE+  E+EAK++ LSYI LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLDEEEPTEVEAKKYGLSYIKLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D VA  F+II SD +VK I +NIFGGI+RCD +  GIL A ++V++N+P+++RL+
Sbjct: 291 GGANPDTVAKGFEIILSDPNVKSIFVNIFGGIVRCDRIANGILQATEKVEVNVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDA 387
           G N +    ++  + + N+I A +L D 
Sbjct: 351 GTNAEEAAEILRNANIKNIIPAENLKDG 378


>gi|134093621|ref|YP_001098696.1| succinyl-CoA synthetase subunit beta [Herminiimonas arsenicoxydans]
 gi|189030208|sp|A4G230|SUCC_HERAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|133737524|emb|CAL60567.1| succinyl-CoA synthetase, beta subunit [Herminiimonas
           arsenicoxydans]
          Length = 388

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 199/397 (50%), Positives = 271/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   KG    SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR S  VA +AS++GGMDIE VA+  P+KI K+ IDP  G+   +   +   + + 
Sbjct: 111 GMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPFKGLLDSEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  + R+  LD+K +FD NALYRH +I 
Sbjct: 171 EGSIPQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIVALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD+IKLYGG+PANFLDVG
Sbjct: 231 EMRDLDEEDPAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDVIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  +K IL+NIFGGIM+CDV+ +G+++A K+V + +PLV+R+ 
Sbjct: 291 GGATTEKVTEAFKIMLKNPDIKAILVNIFGGIMKCDVIAQGVIAAAKQVDLTVPLVVRMA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL +ITA ++ +AA+K+V+A +G
Sbjct: 351 GTNEELGKKILAESGLPIITANNMAEAAEKVVNAAQG 387


>gi|253699670|ref|YP_003020859.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
 gi|251774520|gb|ACT17101.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
          Length = 389

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 214/395 (54%), Positives = 269/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKA+LRK+ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    R++LG TL T QTGP G  V+ V VE G +I  ELY+
Sbjct: 52  -GGRGKGGGVKLARTANEVQMIARDMLGMTLRTHQTGPEGKVVHRVLVECGCNIGSELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AST+GGMDIEEVA   P+KIF   +DPL+G+T      +   L L+
Sbjct: 111 SLLVDRATSRVTVMASTEGGMDIEEVAAKTPEKIFTEAVDPLVGLTPFQCRKIAFSLGLR 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F +LY  F   D SLLEINPL++   G L  LD+K  FDDNAL+RHL I 
Sbjct: 171 GKLTGKAVKVFTSLYNTFIATDCSLLEINPLVVTAEGELIALDAKFGFDDNALFRHLQIG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED+ EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DMRDFDEEDAHEIEASQHDLSYISLSGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +VKGIL+NIFGGIM+CDV+  G++ A ++V I +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G RL+AESGLN++ A  + D AQKIV AV
Sbjct: 351 GTNVEVGKRLLAESGLNIVAADGMADGAQKIVRAV 385


>gi|310641533|ref|YP_003946291.1| succinyl-CoA ligase [ADP-forming] subunit beta [Paenibacillus
           polymyxa SC2]
 gi|309246483|gb|ADO56050.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Paenibacillus
           polymyxa SC2]
          Length = 386

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 203/396 (51%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +L++Y V V  G V  +V  A +A ++L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLKQYGVAVPNGKVAYTVEEAVAAAESLGSAVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   L  V +   EILG  L+T QTG  G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKGLDEVRTIASEILGKVLVTHQTGAEGKEVKRLLIEEGCDIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRATGRIVLMASEEGGTEIEEVAAATPEKIFKAVVDPAIGLQVHQARKLAYEINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF DKD S+ EINPL++  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 NELVNKAVKFMLALYEAFVDKDCSIAEINPLVVTGDGNVLALDAKLNFDSNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII SD  V+GI +NIFGGIM+CD++  G++ A K++ +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVEGIFVNIFGGIMQCDIIANGVVEAAKQLGLTRPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G +++AESGLN++ A  + D AQKIV  V+
Sbjct: 351 GTNVELGKQILAESGLNIVAADSMADGAQKIVELVQ 386


>gi|323464641|gb|ADX76794.1| succinyl-CoA synthetase, beta subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 388

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 201/395 (50%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  S   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFSAEEAVEKAKELVTDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   E+LG  L+T QTGP G  V  +Y+E+GA+I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVEAYANELLGKVLVTHQTGPEGKEVKRLYIEEGANIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG+       +   + + 
Sbjct: 111 GFVIDRATDRVTLMASEEGGTEIEEVAAKNPEKIFKETIDPVIGLAPYQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL++   G +  LDSKI+FDDNAL+RH DI 
Sbjct: 171 KESINKAVKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDSKINFDDNALFRHKDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +++LSYIALDGNIGCMVNGAGLAMATMD I  + G PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFNGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D +VKGI +NIFGGIMRCD++ +GI++AVKEV++ +PLV+RLE
Sbjct: 291 GGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMRCDIIAEGIVAAVKEVELTLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G +++ +SGL +  A  + + AQKIV  V
Sbjct: 351 GTNVKEGKQILKDSGLAIEPANTMAEGAQKIVKLV 385


>gi|283782078|ref|YP_003372833.1| succinyl-CoA synthetase, beta subunit [Pirellula staleyi DSM 6068]
 gi|283440531|gb|ADB18973.1| succinyl-CoA synthetase, beta subunit [Pirellula staleyi DSM 6068]
          Length = 396

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 266/396 (67%), Gaps = 2/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L RK  V V +G V  +   A +A   L GP+ VVK+QIHAGGRGKG  K
Sbjct: 1   MKIHEYQGKELFRKAGVAVLRGKVARTPEEAAAAFTELGGPIAVVKAQIHAGGRGKGTTK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E    ++ GV++  S +   +  R ++G TL+T QTG  G  VN V+VE+G  I RELYL
Sbjct: 61  E--NSAQRGVQLVKSAEEAATVARNLIGKTLVTIQTGEEGKVVNQVFVEEGCKIARELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     + ST+GG++IE VA D P+KIFK   DP +G+    V  LC +L ++
Sbjct: 119 GIVLDRAAAKPVLMVSTEGGVEIETVAHDTPEKIFKEHFDPHVGLLPYQVRKLCVLLGIK 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          L K +   D +++EINPL+I + G L  LD+K++FDDNA++RH D+ 
Sbjct: 179 GASVASADKFMRALCKLWVQLDCAMVEINPLVITEAGDLVALDAKVAFDDNAMFRHKDLA 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+ A    LSY+ LDGNIGC+VNGAGLAM+TMDIIKL+GG PANFLDVG
Sbjct: 239 ELRDLTEEDPAEVRASNTGLSYVKLDGNIGCLVNGAGLAMSTMDIIKLHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AF+II SD +VKGIL+NIFGGI RC  +   I++A K V  N+PLV+RLE
Sbjct: 299 GGANEAQVTEAFRIILSDKNVKGILVNIFGGIARCTTIASAIVAASKAVGFNVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  V+ G +++ ESG+ +I A  L DAA KIV A K
Sbjct: 359 GTEVEEGKKILRESGVKLIAADGLTDAAIKIVEAAK 394


>gi|114799396|ref|YP_759040.1| succinyl-CoA synthetase subunit beta [Hyphomonas neptunium ATCC
           15444]
 gi|123028420|sp|Q0C5F3|SUCC_HYPNA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114739570|gb|ABI77695.1| succinyl-CoA synthetase, beta subunit [Hyphomonas neptunium ATCC
           15444]
          Length = 397

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 248/397 (62%), Positives = 311/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA+GV + S+   + AI TLPGPL+VVKSQIHAGGRGKG+F 
Sbjct: 1   MNIHEYQAKALLKSFGAPVAEGVPVLSLADVQKAIDTLPGPLWVVKSQIHAGGRGKGKFI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  + + V      +LG+ L+T QT   G +VN +Y+EDGADI +ELYL
Sbjct: 61  EKEAGEKGGVRLAFNKEDVKKHAEAMLGNHLVTAQTSAAGKQVNRLYIEDGADIEKELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  VAF+ ST+GGMDIE VA D P+KI  + IDP+ GVT  D A +   L L 
Sbjct: 121 SILVDRATSNVAFVVSTEGGMDIEAVAHDTPEKILTVQIDPMAGVTPADAAKINSALNLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  L+P LYKAF +KDM++LE+NPLI+MK+G LRVLD+K+SFD NAL+RH D+ 
Sbjct: 181 GSAAEDGLKLYPILYKAFVEKDMAMLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHPDVA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D +E+D++E+EA + +L+YIALDG IGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALKDETEQDAKELEAAEWDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGEEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKII  D +VKGIL+NIFGGIM+CDV+ +G+++AVKE  + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIIMKDPNVKGILVNIFGGIMKCDVIAEGVIAAVKETNLAVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G ++I ESGLNVI A DLDDAAQKIV AV+G
Sbjct: 361 GTNVDLGKKIIRESGLNVIPADDLDDAAQKIVKAVRG 397


>gi|237808971|ref|YP_002893411.1| succinyl-CoA synthetase, beta subunit [Tolumonas auensis DSM 9187]
 gi|259511793|sp|C4L8V5|SUCC_TOLAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|237501232|gb|ACQ93825.1| succinyl-CoA synthetase, beta subunit [Tolumonas auensis DSM 9187]
          Length = 389

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 199/398 (50%), Positives = 260/398 (65%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G+  SS   A +A K L G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFADYGLPVPSGIPCSSADEAVAATKKLGGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V +   + LG  L+T QT   G  VN + VE   +I +ELYL
Sbjct: 58  -------GGVKVAGSEQEVRAFADQWLGKRLVTYQTDANGQPVNTILVETCGNIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GGMDIE VA + P+ I K  +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGMDIETVAHNTPELIHKAALDPLTGPQPYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F   D+SLLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 AEQLKQFTKIFLGLGKMFVACDLSLLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D ++ED RE+EA + +L+Y+ALDGNIGCMVNGAGLAM TMDIIK +GG PANFLDVG
Sbjct: 231 AWNDETQEDPREVEAARWDLNYVALDGNIGCMVNGAGLAMGTMDIIKHHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SDS VK +L+NIFGGI+RCD++  G++ AV EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKLILSDSKVKAVLVNIFGGIVRCDLIADGVIGAVAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N D+G++ +AESGLN+I A  L DAA+++V A + V
Sbjct: 351 GNNADLGSKKLAESGLNIIAATSLTDAAEQVVKAAEAV 388


>gi|221069774|ref|ZP_03545879.1| succinyl-CoA synthetase, beta subunit [Comamonas testosteroni KF-1]
 gi|220714797|gb|EED70165.1| succinyl-CoA synthetase, beta subunit [Comamonas testosteroni KF-1]
          Length = 386

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 200/396 (50%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVQKLSEQILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T      +   + L+
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITEAQSRKVAAAIGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     DLF  +YK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GKSVDQAVDLFAKIYKCYMDTDASLVEINPLNCDSKGDLMALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AFRDLDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIANGVVTACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ +SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKQILKDSGLPIIAADTMAEAATKIVAAVK 386


>gi|264680907|ref|YP_003280817.1| succinyl-CoA synthetase subunit beta [Comamonas testosteroni CNB-2]
 gi|299530898|ref|ZP_07044312.1| succinyl-CoA synthetase subunit beta [Comamonas testosteroni S44]
 gi|262211423|gb|ACY35521.1| succinyl-CoA synthetase, beta subunit [Comamonas testosteroni
           CNB-2]
 gi|298721119|gb|EFI62062.1| succinyl-CoA synthetase subunit beta [Comamonas testosteroni S44]
          Length = 386

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 200/396 (50%), Positives = 270/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVQKLSEQILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+T      +   + L+
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITEAQSRKVAAAIGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     DLF  +YK + D D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GKSVDQAVDLFAKIYKCYMDTDASLVEINPLNCDSKGDLMALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AFRDLDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIATGVVTACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ +SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKQILKDSGLPIIAADTMAEAATKIVAAVK 386


>gi|229918615|ref|YP_002887261.1| succinyl-CoA synthetase subunit beta [Exiguobacterium sp. AT1b]
 gi|259511782|sp|C4L610|SUCC_EXISA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229470044|gb|ACQ71816.1| succinyl-CoA synthetase, beta subunit [Exiguobacterium sp. AT1b]
          Length = 386

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 204/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR++ V V  G    +V  A +A   L G + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKELLREFGVAVPTGYPAFTVEEAVAAAAKLDGEVKVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V     EILG TL+T QTGP G  V  +Y+E+G+ I +E YL
Sbjct: 58  -------GGVKLAKTDEEVKQYASEILGKTLVTHQTGPEGKVVQRLYIEEGSAIDQEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+ G +  + S++GGMDIEEVA+  P+KI K ++DP++G+       L   +E+ 
Sbjct: 111 GLVLDRSIGRIVIMGSSEGGMDIEEVAEHTPEKIHKEIVDPVVGLRPFQARRLAFKMEVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +  D+   LYK + + D ++ EINPL+  K+G +  LD+K++FD NALYRH DI 
Sbjct: 171 TKLVNEFSDMVMKLYKVYVETDCTIAEINPLVTTKDGNVIALDAKLNFDSNALYRHSDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED RE+EA +H+LSYIALDGNIGC+VNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ALRDTTEEDPREVEASKHDLSYIALDGNIGCLVNGAGLAMATMDIIKHYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK+I SD  VKGI +NIFGGIM+CD++ +GI++A KE+ +++PLV+RLE
Sbjct: 291 GGATKEKVTEAFKLILSDDQVKGIFVNIFGGIMKCDIIAEGIVAATKEIGLDLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G R++ ESGL + TA  + D A+KI   V+
Sbjct: 351 GTNVDAGKRILDESGLAITTANSMADGAEKIAALVR 386


>gi|188996560|ref|YP_001930811.1| succinyl-CoA synthetase, beta subunit [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|226734995|sp|B2V8I4|SUCC_SULSY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|188931627|gb|ACD66257.1| succinyl-CoA synthetase, beta subunit [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 389

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 186/395 (47%), Positives = 254/395 (64%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK + RKY +PV +G     V  A  A + L     VVK+QIHAGGRGK    
Sbjct: 1   MKVHEHQAKEIFRKYGLPVPRGYPAFDVKEAVEAAEELGTWPVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V     E+LG  L T QTGP G  V+ +Y+E+   I +E Y+
Sbjct: 58  -------GGVKLAKSIEEVQQIASELLGKKLATFQTGPEGLPVSRLYIEEATAIDKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+      + S  GGM+IEEVA   P+ I    I+P IG+ S     L   L L 
Sbjct: 111 AITLDRSKSKPIIMVSAAGGMEIEEVAATNPEAIITQTIEPFIGLRSYHARELALKLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  LYK + + D S++EINPL++ K+G + +LD+KI FDDN L+RH +I 
Sbjct: 171 KNLLNKAASIFTTLYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNGLFRHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++    E+EAK+ NL+YI LDGNI CMVNGAGLAM+TMD IKL GG PANFLDVG
Sbjct: 231 EMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+  ++A AFKII SD +VK I INIFGGI+RCD L +GI++A KEV IN+P+++R+E
Sbjct: 291 GSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++ ESGL +ITA  + + A K V A 
Sbjct: 351 GTNVELGKKMLQESGLPLITADTMWEGALKAVEAA 385


>gi|88860191|ref|ZP_01134830.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas tunicata
           D2]
 gi|88818185|gb|EAR28001.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas tunicata
           D2]
          Length = 388

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 190/386 (49%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGFACDTPQEAAEAADKIGGNMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +    +  LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKEEIKEFAQHWLGKNLVTYQTDANGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K +IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRGSRKVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I + G L  LD KI  D NALYR   I+
Sbjct: 171 PDQMKQFTKIFMGLAKMFNDFDFALLEINPLVITEQGNLHCLDGKIGVDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE +A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMRDPSQEDEREAQAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A SGL++I A  L D
Sbjct: 351 GTNAELGRQVLANSGLDIIAAESLTD 376


>gi|146282241|ref|YP_001172394.1| succinyl-CoA synthetase subunit beta [Pseudomonas stutzeri A1501]
 gi|189081773|sp|A4VKQ1|SUCC_PSEU5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145570446|gb|ABP79552.1| succinyl-CoA synthetase beta chain [Pseudomonas stutzeri A1501]
 gi|327480489|gb|AEA83799.1| succinyl-CoA synthetase subunit beta [Pseudomonas stutzeri DSM
           4166]
          Length = 388

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + S   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDSPKEAAEACDKIGGTQWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  ++ L   L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKDEARAFAQQWLDKRLVTYQTDANGQPVSKILVEACTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRASRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPFQARELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GDQVKQFVHIFVGLAQLFQDYDLALLEVNPLVIKTDGNLHCLDAKINIDSNAIYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GGAPANFLDVG
Sbjct: 231 DMADPSQDDPREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATEERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVREVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G ++++ESGLN+I A  L DAA ++V A +G
Sbjct: 351 GNNADLGAKMLSESGLNIIGANSLTDAAIQVVKAAEG 387


>gi|303252122|ref|ZP_07338290.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247458|ref|ZP_07529503.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648905|gb|EFL79093.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855961|gb|EFM88119.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 388

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS+ GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASSAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRLIAANTLTQAAQLAVKAAEG 387


>gi|197117851|ref|YP_002138278.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
 gi|197087211|gb|ACH38482.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
          Length = 392

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 211/395 (53%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LRK+ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V    R++LG TL T QTGP G  V+ V VE+G +I RELY+
Sbjct: 52  -GGRGKGGGVKLAKSASEVQLIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIARELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AST+GGMDIEEVA   P+KIF   IDPL+G+T      +   L L+
Sbjct: 111 SLVVDRNSSKVAVMASTEGGMDIEEVAAKTPEKIFTETIDPLVGLTQFQGRKIAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LY  F   D ++LE+NPL++   G L  LD+K  FDDNAL+RHL I 
Sbjct: 171 GKQVGKAVKMLEALYTTFIACDCAMLEVNPLVVTAEGELLALDAKFGFDDNALFRHLQIG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DMRDFDEEDPNEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +V+GIL+NIFGGIM+CDV+  G++ A ++V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDRNVEGILVNIFGGIMKCDVIATGVIQAARQVALKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  L+A+SGL+++ A  + DAAQKIV AV
Sbjct: 351 GTNVEKGKELLAQSGLDIVAADGMADAAQKIVMAV 385


>gi|281209693|gb|EFA83861.1| succinate-CoA ligase [Polysphondylium pallidum PN500]
          Length = 424

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 194/395 (49%), Positives = 263/395 (66%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L+ KY V   K  VIS+   A+ A K L     V+K+Q+HAGGRGKG F 
Sbjct: 30  LNLHEYQSKMLMDKYGVNTQKWRVISNASEAQKAAKELNAKELVIKAQVHAGGRGKGTFI 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV++ ++ +       E+LG  L+TKQT   G+ V  V + +  D  RELY 
Sbjct: 90  E--TGFKGGVQLCTTPQEAERLSAEMLGKHLVTKQTTKDGTLVQKVMIAESVDPSRELYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR SG    +AS +GG+DIE VA++ P+ IFK  ID + GV  E    L   L   
Sbjct: 148 AILMDRASGGPVLVASPKGGVDIEAVAEETPELIFKEPIDIMKGVQPEQTLRLAKKLGFT 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G           NLY+ F   D + +E+NP     NG +  +D+KI+FDDNA +R   I 
Sbjct: 208 GDKVAVAQKQMENLYELFIKSDATQVEVNPFAETTNGEIYAMDAKINFDDNASFRQKQIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RDV+EED RE+ A +  L+YI +DGNIGC+VNGAGLAMATMDIIKL+ G PANFLDVG
Sbjct: 268 DMRDVAEEDPREVAASKFGLNYIGMDGNIGCLVNGAGLAMATMDIIKLHKGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  AFKIIT+D  VK IL+NIFGGIM+CD++ +G++SA +++ + IPLV+RL 
Sbjct: 328 GGATADQVREAFKIITTDPQVKAILVNIFGGIMKCDIIAQGVVSACQQIGLKIPLVVRLA 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG +++ +SG N+ITA+DLDDAA K V A+
Sbjct: 388 GTNVEIGQKILKDSGFNIITAVDLDDAAIKAVAAM 422


>gi|114769504|ref|ZP_01447130.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
 gi|114550421|gb|EAU53302.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
          Length = 399

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 176/396 (44%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + + G  +++K+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILSDFGVKVPNGGLAYSPEQAAYRAREMGGNKWIIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+   +I     +LG  L+T QTGP G  +  +YVE G  I RE+YL
Sbjct: 58  -------GGVKVCSNDNEIIEAASSMLGRKLVTHQTGPEGKGIYRLYVEAGVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  +  +AS++GGM+IEE++ + P+ I +  IDP +G+       +   L ++
Sbjct: 111 GFVLDRTTQRIMIVASSEGGMEIEEISANRPESIVRASIDPAVGLVEFQAREIAFQLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         + AF D D +++EINPL++  + ++  LD+K++FDDNAL+RH  I 
Sbjct: 171 PSLTQQMVRTLMGCFNAFQDLDATMVEINPLVVTTDHQVIALDAKMTFDDNALFRHPKIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESNAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLSGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V+ AF+++ SD  V+ IL+NIF GI RCD + +G++ A+K+  INIP+++RL 
Sbjct: 291 GGATPERVSKAFRLVRSDKKVEAILVNIFAGINRCDWVAEGVVQALKDDPINIPVIVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G R++A+SGL +I A  L +AA + V A K
Sbjct: 351 GTNVEEGQRILAKSGLPIIRAATLKEAADRAVSAWK 386


>gi|197116660|ref|YP_002137087.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
 gi|197086020|gb|ACH37291.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
          Length = 386

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 258/397 (64%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSTFGIPVPRGRVALTADQVERAAKEMGG-RCVVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G TL+T QTGP G +V  + VE+  DI RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDLAKELFGKTLVTPQTGPEGLKVRRILVEEAVDIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GGM+IEEVA   P+KI  L IDP  G+ S     +   L L 
Sbjct: 110 SITLDRGTSRYILIASAEGGMEIEEVATRSPEKIHTLTIDPFTGLRSFQARHIALQLGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D   L  NLY+   +KD +L+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVSLILNLYRVCLEKDCALVEINPLVVTRAGWLMAMDAKITFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L G IGC+VNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDPLEINAGKYDLAYIKLTGTIGCLVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKGI +NIFGGIMRCDV+  GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G+ V+ G RL+ ESGLNV    +L DAA +IV  + G
Sbjct: 350 GSQVEEGKRLLTESGLNVQCGDNLGDAAARIVKMLAG 386


>gi|194335891|ref|YP_002017685.1| succinyl-CoA synthetase, beta subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|226734969|sp|B4SEH6|SUCC_PELPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|194308368|gb|ACF43068.1| succinyl-CoA synthetase, beta subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 392

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 187/399 (46%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK----TLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V +G+V  S   A+ A +     L  P+ V+K+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPRGIVAYSPEEAKQAAEQLFDELGCPVVVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +  +    +++G TLIT QTGP G  V  V VE+G +I +
Sbjct: 61  A----------GGVKLAKSPEESLDIAHQLIGMTLITHQTGPEGKEVRRVLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P+++ K+ IDPL G+           
Sbjct: 111 EFYVGITLDRSTSKNVLMVSTEGGMEIEKVAEETPERLLKIQIDPLFGMQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +  +    LY A+   D +L EINPL++ K G++  LD+KI+FDDNAL+RH
Sbjct: 171 LGLKGEQFRNAVNFITALYNAYISIDAALAEINPLVVTKEGKVLALDAKINFDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD +EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KEFHELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A K++ +++P++
Sbjct: 291 LDVGGSASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIDLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N  I  +++ +SGLN+I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNAPIAQKMLDDSGLNLIAAKGLRDAAQKVQEAL 389


>gi|121606840|ref|YP_984169.1| succinyl-CoA synthetase subunit beta [Polaromonas naphthalenivorans
           CJ2]
 gi|189081766|sp|A1VUC0|SUCC_POLNA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120595809|gb|ABM39248.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 386

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++ V     EILG  L T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKTIEDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS++GGMDIEEVA   P+KI    IDPL G+  E    + + + L 
Sbjct: 111 SLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEFIDPLTGLGEEQAVKIANGIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++     D+F  LYK + D D SL+EINPL       L  LD+K +FD NAL+RH DI 
Sbjct: 171 PESTAQAVDIFQKLYKCYMDTDASLVEINPLNRDSKNALMALDAKFNFDPNALFRHADIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPDVKGILVNIFGGIMKCDTIADGVIAACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|114328734|ref|YP_745891.1| succinyl-CoA synthetase subunit beta [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316908|gb|ABI62968.1| succinyl-CoA synthetase beta chain [Granulibacter bethesdensis
           CGDNIH1]
          Length = 398

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 216/395 (54%), Positives = 289/395 (73%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+++ +PV +G V  +   A  A + LPGP YVVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKELLKEFGIPVLEGHVAWTPDEAREAARRLPGPRYVVKAQIHAGGRGAGHFL 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGVR+ +S++        +LG  L+TKQTG  G RV+ VY+E G +I RELYL
Sbjct: 61  HSQSG-RGGVRLAASVEEAGEHAAAMLGQILVTKQTGAAGRRVHRVYIEAGCEIERELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  V  +AS +GGMDIEEVA   P++I ++ +DP +G++      +   L L 
Sbjct: 120 SLLVDRDTSRVTIVASAEGGMDIEEVAASRPERIVRVTVDPAMGLSEFHARRIAFRLGLS 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYKA+   D +++EINPL++ K G +  LD+K+ FDDNALYRH +++
Sbjct: 180 GMQLASFGRMVKALYKAYIALDCAVVEINPLVVTKGGDMLALDAKVIFDDNALYRHPELE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+EA +H LSYIALDG IGCMVNGAGLAMATMDII+LYG  PANFLDVG
Sbjct: 240 RLRDPAEEDPKELEAARHKLSYIALDGTIGCMVNGAGLAMATMDIIRLYGAKPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAFKII +D +V+GILINIFGGIMRCDV+ +G+++A +EV +++PLV+RLE
Sbjct: 300 GGATKERVAAAFKIILADPNVEGILINIFGGIMRCDVIAEGVVAAAREVSLSVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  ++ +SGL+++ A DLDDAA+KIV AV
Sbjct: 360 GTNVEQGRAILNQSGLSIVAADDLDDAARKIVAAV 394


>gi|126740184|ref|ZP_01755873.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
 gi|126718639|gb|EBA15352.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
          Length = 399

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  ++VK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILSNFGVAVPSGALAYSPEQAAYRARELGGEKWIVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     ++ G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCDSEGEIYEACEDMFGRKLVTHQTGPEGKGIYRVYVESAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V  +AS++GGM+IEE++ + P  I +  ++P +G+       +   L L+
Sbjct: 111 GFVLDRSSQRVMIVASSEGGMEIEEISAEKPDSIVRSTVEPAVGLQEFQAREIAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y AF + D +++EINPL+I  + R+  LD+K+SFDDNAL+RH  I 
Sbjct: 171 PGMVQQMVRTLQGCYAAFSELDATMVEINPLVITGDNRVLALDAKMSFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ IL+NIF GI RCD + +G++ A++E++I++P+V+RL 
Sbjct: 291 GGASPERVAKAFRLVLSDDNVQAILVNIFAGINRCDWVAEGVVQALRELEIDLPVVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL VI A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAKSGLPVIRATTLMEAAERAVGAWQ 386


>gi|152980238|ref|YP_001352080.1| succinyl-CoA synthetase beta chain [Janthinobacterium sp.
           Marseille]
 gi|189030248|sp|A6SUY3|SUCC_JANMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151280315|gb|ABR88725.1| succinyl-CoA synthetase beta chain [Janthinobacterium sp.
           Marseille]
          Length = 388

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 199/397 (50%), Positives = 273/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   KG    SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR S  VA +AS++GGMDIE VA+  P+KI K+ IDP+ G+   +   +   + + 
Sbjct: 111 GMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPVKGLLDSEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  + R+  LD+K +FD NA+YRH +IQ
Sbjct: 171 EGSIGQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIVALDAKFNFDSNAMYRHPEIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD+IKLYGG+PANFLDVG
Sbjct: 231 EMRDLDEEDPAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDVIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  +K IL+NIFGGIM+CDV+ +G+++A K+V + +PLV+R+ 
Sbjct: 291 GGATTEKVTEAFKIMLKNPDIKAILVNIFGGIMKCDVIAQGVIAAAKQVDLTVPLVVRMA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL +ITA ++ +AA+K+V+A +G
Sbjct: 351 GTNEELGKKILAESGLPIITANNMAEAAEKVVNAAQG 387


>gi|88703459|ref|ZP_01101175.1| Succinyl-CoA synthetase beta chain [Congregibacter litoralis KT71]
 gi|88702173|gb|EAQ99276.1| Succinyl-CoA synthetase beta chain [Congregibacter litoralis KT71]
          Length = 389

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+ G  + S  AA  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKRLFAEYGLPVSTGHAVDSPQAAVEAADLIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +       LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTKDEIAEFTSHWLGKNLVTYQTDANGQPVSKILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI + +IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILRAVIDPLNGAQPYQGRELAFNLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD++L+EINPL+I   G L  LD+KI  D NALYR  +++
Sbjct: 171 GEQIKQFVKIFLGLAKMFQEKDLALIEINPLVITTEGNLHCLDAKIGVDGNALYRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDERESHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD  VK +LINIFGGI+RCD++ +G++ AV+E+ + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDKVKAVLINIFGGIVRCDLIAEGVIGAVEEIGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGRKVLADSGLNIIAATSLTDAAQQAVKAAGG 387


>gi|110681359|ref|YP_684366.1| malate--CoA ligase subunit beta [Roseobacter denitrificans OCh 114]
 gi|109457475|gb|ABG33680.1| malate-CoA ligase, beta subunit, putative [Roseobacter
           denitrificans OCh 114]
          Length = 399

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 252/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILASFGVDVPPGALAYSPEQAAYRARELGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   +      + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCDSDVEIHKTCEGLFGRKLVTHQTGPEGKGIYRVYVEGAVPIEREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRTS  V  +AS +GGM+IE+++ D P  I +  ++P +G+       +   L + 
Sbjct: 111 GFVLDRTSQRVMIVASAEGGMEIEDISADKPDSIVRDTVEPAVGLQDFQCRQIAFKLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++E+NPL++  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PALTQRMVRTLQGCYRAFREYDATMVEVNPLVVTGDNRILALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD SV+ IL+NIF GI RCD + +G++ A++EV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQALREVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAQSGLPIIRATTLMEAAERAVGAWQ 386


>gi|53728850|ref|ZP_00134895.2| COG0045: Succinyl-CoA synthetase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207936|ref|YP_001053161.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           L20]
 gi|307256506|ref|ZP_07538287.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|189046872|sp|A3MZH0|SUCC_ACTP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126096728|gb|ABN73556.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306864916|gb|EFM96818.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 388

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRLIAANTLTQAAQLAVKAAEG 387


>gi|251790492|ref|YP_003005213.1| succinyl-CoA synthetase subunit beta [Dickeya zeae Ech1591]
 gi|247539113|gb|ACT07734.1| succinyl-CoA synthetase, beta subunit [Dickeya zeae Ech1591]
          Length = 388

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMRDHSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|253701392|ref|YP_003022581.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
 gi|251776242|gb|ACT18823.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
          Length = 392

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 211/395 (53%), Positives = 268/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+LRK+ VPV  G V  +  +A    K L    +VVK+QIHA         
Sbjct: 1   MNIHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V    R++LG TL T QTGP G  V+ V VE+G +I RELY+
Sbjct: 52  -GGRGKGGGVKLAKSAGEVQLIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIARELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AST+GGMDIEEVA   P+KIF   IDPL+G+T      +   L L+
Sbjct: 111 SLVVDRNSSKVAVMASTEGGMDIEEVAAKTPEKIFTETIDPLVGLTQFQGRKIAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LY  F   D ++LE+NPL++   G L  LD+K  FDDNAL+RHL I 
Sbjct: 171 GKQVGKAVKMLEALYTTFIACDCAMLEVNPLVVTAEGELLALDAKFGFDDNALFRHLQIG 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD  EED  EIEA QH+LSYI+L GNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DMRDFDEEDPNEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFKII SD +V+GIL+NIFGGIM+CDV+  G++ A ++V + +PLV+RLE
Sbjct: 291 GGATIERVTEAFKIILSDKNVEGILVNIFGGIMKCDVIATGVIQAARQVALKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  L+A+SGL+++ A  + DAAQKIV AV
Sbjct: 351 GTNVEKGKELLAQSGLDIVAADGMADAAQKIVMAV 385


>gi|66824365|ref|XP_645537.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
 gi|74857927|sp|Q55AI5|SUCB1_DICDI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|60473670|gb|EAL71611.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
          Length = 445

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/398 (48%), Positives = 266/398 (66%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQA+ +++ Y +    G V  +   AE   + +     VVK+Q+ AGGRGKG F 
Sbjct: 35  LNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAEVMNTQDLVVKAQVLAGGRGKGIF- 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++ SS + V     ++LG TL+TKQTG  G  V+ VYV +   + +E+Y 
Sbjct: 94  --TSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYF 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    +AS +GG+DIE VA+D P  IFK  ID +IGV  E    L + L   
Sbjct: 152 AILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINPL    +G +  +D+K++FDDNA +RH DI 
Sbjct: 212 KKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFRHPDIF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED RE++A + +L+YI LDGNIGC+VNGAGLAMA+MDIIKLYGG+PANFLDVG
Sbjct: 272 KLRDKSQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGGSPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD  VK IL+NIFGGIM+CDV+  GI++A+KE+ I  PLV+RL+
Sbjct: 332 GGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDVIALGIIAALKELSIATPLVVRLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+   +++ +SGL +I A +LDDAAQK V   + V
Sbjct: 392 GTNVEAAKKIMEDSGLRLIAADNLDDAAQKSVRIAEIV 429


>gi|42525134|ref|NP_970514.1| succinyl-CoA synthetase beta chain [Bdellovibrio bacteriovorus
           HD100]
 gi|81615897|sp|Q6MGW1|SUCC_BDEBA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|39577345|emb|CAE81168.1| succinyl-CoA synthetase beta chain [Bdellovibrio bacteriovorus
           HD100]
          Length = 387

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 273/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRK+ V   KG +  S   A +A K + G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKEVLRKFGVATLKGKLAHSPEEAVAAAKEIGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V    ++++G TL+T QTGP G  V  V++E G +I +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVSEFTKKMIGMTLVTHQTGPEGKVVQKVFIEQGCNIAKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L+DR +G  A +AS++GGMDIEEVA+  P  I K+ IDP +G+       L   + ++
Sbjct: 111 ACLIDRATGRAAMMASSEGGMDIEEVAEHNPDAIKKVDIDPTVGLMPFQARELAFQIGME 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                     F  LY AF   D S+ EINPL++ K G +  LD+K++FD N+L+RH DI 
Sbjct: 171 PAIVNKAVKFFAGLYNAFVATDCSIAEINPLVVTKEGDVLCLDAKMNFDSNSLFRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD++EE+  EIEA + +L++I LDGNIGC+VNGAGLAMAT+DIIKL+G  PANFLDVG
Sbjct: 231 EMRDLNEEEPSEIEASKFDLAFIKLDGNIGCLVNGAGLAMATLDIIKLHGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV  AFKII  D +VKGIL+NIFGGIM+CD++ +G+++A KE+ + +PLV+RLE
Sbjct: 291 GGANKEKVTEAFKIILKDKNVKGILVNIFGGIMKCDIIAEGVIAASKELGLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGLN+  A +L DAA+KIV A+KG
Sbjct: 351 GTNVELGKKMLKESGLNITPADNLTDAAKKIVAAIKG 387


>gi|114769289|ref|ZP_01446915.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
 gi|114550206|gb|EAU53087.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium
           HTCC2255]
          Length = 397

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 234/397 (58%), Positives = 296/397 (74%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y  PV+ G  +     A SA   L GPL+VVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKQLLKSYGCPVSVGRPVYKASEARSAANELGGPLWVVKAQIHAGGRGKGSFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  S+    S+  ++LG+TL+T QTGP G +VN +Y+EDG+DI  ELYL
Sbjct: 61  EPAAGEKGGVRLTFSIDEAASEAEKMLGNTLVTHQTGPAGKQVNRIYIEDGSDIETELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT+  ++F+AST+GGMDIE VA+  P+KI  + IDP  G T E+   + + L+L 
Sbjct: 121 AVLLDRTTSRISFVASTEGGMDIEAVAEKTPEKIITVTIDPSFGFTKENGIEVSNALKLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  +L  NLY+ F ++DM +LEINPLI+M+NG L+ LD+K++FD NAL+R  DI 
Sbjct: 181 GNNIDECIELTSNLYRMFVERDMDMLEINPLIVMENGGLKCLDAKMAFDGNALFRQPDIL 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++E+EA +++LSYIALDG IGCMVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 241 ALRDETEEDAKELEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLKGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIITSD  VKGIL+NIFGGIMRCDV+ +G++ AVKEV + +PLV+RLE
Sbjct: 301 GGATAEKVTAAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVVEAVKEVGLTVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G  V  G  +I  S  +VI A DLDDAA KIV AVKG
Sbjct: 361 GTKVQEGKDIINNSPFDVIAADDLDDAAAKIVKAVKG 397


>gi|307130099|ref|YP_003882115.1| succinyl-CoA synthetase, subunit beta [Dickeya dadantii 3937]
 gi|306527628|gb|ADM97558.1| succinyl-CoA synthetase, beta subunit [Dickeya dadantii 3937]
          Length = 388

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLANLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDHSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|21673219|ref|NP_661284.1| succinyl-CoA synthetase, beta subunit [Chlorobium tepidum TLS]
 gi|25453283|sp|Q8KFE7|SUCC_CHLTE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21646302|gb|AAM71626.1| succinyl-CoA synthetase, beta subunit [Chlorobium tepidum TLS]
          Length = 392

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/399 (48%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+++ V V KG+V  S   A+ A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKGILKQFGVAVPKGIVAFSAEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S + V    +++LG+TL+T QTGP G  V  + +E+G +I +
Sbjct: 61  A----------GGVKLAKSPEEVFEIAQKMLGATLVTHQTGPEGKEVRRLLIEEGMNIDK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DRT+     + ST+GGM+IE+VA++ P+K+ K+ +DP+ G+           
Sbjct: 111 EFYLGITLDRTTSSNVLMVSTEGGMEIEKVAEETPEKLLKIHVDPVYGLQGFQARKAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L LQG+   +G      LY A+   D SL EINPL+I K GR+  LD+KI+FDDNALYRH
Sbjct: 171 LGLQGEQFRNGVKFIEALYNAYTTIDASLAEINPLVITKEGRVLALDAKINFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  +LRD++EED  E EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 SDFHDLRDITEEDPLEYEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLSGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII  D +VK IL+NIFGGI+RCD +  GI+ A K + + +P++
Sbjct: 291 LDVGGGASSKTVEEGFKIILGDKNVKAILVNIFGGIVRCDRVAGGIIEAAKNIGLKVPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N     +++ ESGLN+I+A  L DAA+K+  A+
Sbjct: 351 VRLEGTNATEAQKMLDESGLNLISAKGLRDAAEKVQKAL 389


>gi|253698899|ref|YP_003020088.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
 gi|251773749|gb|ACT16330.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
          Length = 386

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 259/397 (65%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSAFGIPVPRGRVALTADQVERAAKEMGG-RCVVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G TL+T QTGP G +V  + VE+  DI RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDLAKELFGKTLVTPQTGPEGLKVRRILVEEAVDIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GGM+IEEVA   P+KI  L IDP +G+ S     +   L L 
Sbjct: 110 SITLDRGTSRYILIASAEGGMEIEEVATRSPEKIHTLTIDPFLGLRSFQARHIALQLGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D   L  NLY+   +KD +L+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVSLILNLYRVCLEKDCALVEINPLVVTRAGWLMAMDAKITFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L G IGC+VNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDPLEINAGKYDLAYIKLTGTIGCLVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKGI +NIFGGIMRCDV+  GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G+ V+ G RL+ ESGLNV    +L DAA +IV  + G
Sbjct: 350 GSQVEEGKRLLTESGLNVQCGDNLGDAAARIVKMLAG 386


>gi|332288475|ref|YP_004419327.1| succinyl-CoA synthetase subunit beta [Gallibacterium anatis UMN179]
 gi|330431371|gb|AEC16430.1| succinyl-CoA synthetase subunit beta [Gallibacterium anatis UMN179]
          Length = 388

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y +PV++G+   +V     A+KTL G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQIFAEYKLPVSRGIACQTVEEGLQAMKTLGGKEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +     + LG  L+T QT   G  VN +YVE+ +D+ +ELY+
Sbjct: 58  -------GGVKLVQTEEQLTEFFNKWLGKRLVTFQTDANGQPVNTIYVEEASDLEKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR+S  V F+AST+GG++IEEVA   P  + K+ +D LIG        L   L L 
Sbjct: 111 GMVIDRSSQSVVFMASTEGGVNIEEVAAKTPHLLHKVYVDALIGGMPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F +KD SLLEINPL+I+KNG+L  LD+K+  D NALYRH D+ 
Sbjct: 171 PEQTKQFTQMFCQLTKLFIEKDASLLEINPLVILKNGKLHCLDAKVVIDGNALYRHPDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+S+ED RE EA++  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMRDLSQEDPREAEAEESQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++  GI+ AVKEV IN+P+V+RLE
Sbjct: 291 GGATKERVATAFKIILSDKNVKAVLVNIFGGIVRCDLIANGIIDAVKEVGINVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A SGL +  A  L +AAQ +V A +
Sbjct: 351 GNNAELGREILANSGLKITAANSLTEAAQLVVKAAE 386


>gi|187478794|ref|YP_786818.1| succinyl-CoA synthetase subunit beta [Bordetella avium 197N]
 gi|123514488|sp|Q2KYF7|SUCC_BORA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115423380|emb|CAJ49914.1| Succinyl-CoA synthetase beta chain [Bordetella avium 197N]
          Length = 386

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/384 (50%), Positives = 260/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+++ VPV +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKQFGVPVPRGIPAFSVEEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG  L+T QTG  G +VN +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQLASQILGMQLVTHQTGAQGQKVNRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI    IDP++G+T      + D + + 
Sbjct: 111 SLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEYIDPIVGLTDAQAKKVADAIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F  LY+ + D D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQAVDVFKKLYQCYMDTDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCDV+ +G++SA K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKGVKAILVNIFGGIMRCDVIAEGVISACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G +++AESGL +I+A  +
Sbjct: 351 GTNEELGKKMLAESGLPIISADTM 374


>gi|212212234|ref|YP_002303170.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii CbuG_Q212]
 gi|226734940|sp|B6IZ97|SUCC_COXB2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|212010644|gb|ACJ18025.1| succinyl-CoA synthetase beta chain [Coxiella burnetii CbuG_Q212]
          Length = 390

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 275/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG  L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGMRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|254707547|ref|ZP_05169375.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis
           M163/99/10]
 gi|261315030|ref|ZP_05954227.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis
           M163/99/10]
 gi|261304056|gb|EEY07553.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis
           M163/99/10]
          Length = 375

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 252/375 (67%), Positives = 314/375 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL  Y  P+A GV + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+++ +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR+ G  AF+ ST+GGMDIE VA++ P+KI  + IDP  GVT ED   L D L+L+
Sbjct: 121 SILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  LFP LYKAF +KDMSLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGASKEKVTAAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESG 375
           G NV++G ++I ESG
Sbjct: 361 GTNVELGKKIINESG 375


>gi|254251508|ref|ZP_04944826.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158]
 gi|124894117|gb|EAY67997.1| Succinyl-CoA synthetase [Burkholderia dolosa AUO158]
          Length = 388

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA   P+ I K+ ++P  G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAAKTPEAIHKVAVEPSKGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I+A  +++AAQK+V A +G
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEEAAQKVVAAAEG 387


>gi|254361864|ref|ZP_04977998.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213]
 gi|153093403|gb|EDN74394.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213]
          Length = 386

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 194/395 (49%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK + ++Y +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +Y+E+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETCNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AS+ GGM+IEEVA+  P+ I K +IDPL G        L   L L+
Sbjct: 111 GAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L   F +KD++LLE+NPL+I K G+L  LD+K+S D NALYRH +++
Sbjct: 171 GDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL+D S++D RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAFK+I SD +VK +L+NIFGGI+RCD++  G+++AV EV +N+P+++RLE
Sbjct: 291 GGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIAAVNEVGVNVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N   G  ++A SGL+++ A  L  AA+  V + 
Sbjct: 351 GTNAAQGREILANSGLSILAASSLKQAAELAVKSA 385


>gi|254428177|ref|ZP_05041884.1| succinyl-CoA synthetase, beta subunit subfamily [Alcanivorax sp.
           DG881]
 gi|196194346|gb|EDX89305.1| succinyl-CoA synthetase, beta subunit subfamily [Alcanivorax sp.
           DG881]
          Length = 389

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+ G    +     +  K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFADYGLPVSTGFACDTPEEVAAKAKEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDTPEDAAAFAKQWLGKNLVTFQTDEHGQPVSKILVETCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V F+AST+GG+DIE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 SAVLDRASRRVVFMASTEGGVDIETVAEETPEKILKAEIDPLVGAQPYQAREIAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F DKD++L+E+NPL+I   G L  LD+KI+ D +ALYRH DI+
Sbjct: 171 GKQVNQFAKIFVGLAKLFIDKDLALIEVNPLVITDEGDLHCLDAKINVDGSALYRHPDIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+ED RE  A + +L+Y+ALDGNIGCMVNGAGLAM TMD++KL GGAPANFLDVG
Sbjct: 231 ALDDPSQEDERERRAAEWDLNYVALDGNIGCMVNGAGLAMGTMDLVKLKGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VKG+L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDQVKGVLVNIFGGIVRCDLIAEGIIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++ +AESG+N+I A   DDAA+++V AV G
Sbjct: 351 GNNAELGSQKLAESGMNIIAAQSFDDAAEQVVKAVGG 387


>gi|117620947|ref|YP_856460.1| succinyl-CoA synthetase beta chain [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|189046874|sp|A0KJK9|SUCC_AERHH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117562354|gb|ABK39302.1| succinyl-CoA synthetase beta chain [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 388

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/396 (48%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G   ++   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGYACATPQEAAEAADKIGGNTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   + +  +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA + P+ I K  +DPL+G        L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAHETPELIHKAALDPLVGPQPYQARELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L + F D D +LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GEQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 QMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSKVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G R +A+SGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLTDAAQQVVKAAE 386


>gi|119476709|ref|ZP_01617019.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2143]
 gi|119449965|gb|EAW31201.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2143]
          Length = 388

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG    +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYACDTPEEAAQAADKIGGNKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + + S     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDSKEEIKSFAENWLGKNLVTYQTDENGQPVSKILVEACTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA + P+KI +  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVADETPEKILRAEIDPLVGAQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++F  L K F DKD++L+E+NPL+I   G L  LD+K+  D NA+YR   ++
Sbjct: 171 GVQIKQFVNIFLGLAKLFQDKDLALIEVNPLVITDEGNLHCLDAKLGVDSNAMYRQPTLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDTVKAVLVNIFGGIVRCDLIAEGIIGAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++L+AESGLN+I A  L +AA  +V A +G
Sbjct: 351 GNNAELGSKLLAESGLNIIAANSLKEAADAVVKAAEG 387


>gi|145299311|ref|YP_001142152.1| succinyl-CoA synthetase subunit beta [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|189046875|sp|A4SND2|SUCC_AERS4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|142852083|gb|ABO90404.1| succinyl-CoA synthetase, beta subunit [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 388

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G   ++   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFAEYGLPVSEGYACATPQEAAEAADKIGGTTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   + +  +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE++A + P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVDIEKIAHETPELIHKAAIDPLVGPQAYQARELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D +LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSKVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G R +A+SGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLTDAAQQVVKAAE 386


>gi|152969298|ref|YP_001334407.1| succinyl-CoA synthetase subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206577005|ref|YP_002239648.1| succinate-CoA ligase, beta subunit [Klebsiella pneumoniae 342]
 gi|238893765|ref|YP_002918499.1| succinyl-CoA synthetase subunit beta [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936489|ref|YP_003440548.1| succinyl-CoA synthetase subunit beta [Klebsiella variicola At-22]
 gi|290510455|ref|ZP_06549825.1| succinyl-CoA ligase [ADP-forming] subunit beta [Klebsiella sp.
           1_1_55]
 gi|329998755|ref|ZP_08303209.1| succinate-CoA ligase, beta subunit [Klebsiella sp. MS 92-3]
 gi|189030249|sp|A6T6F6|SUCC_KLEP7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734960|sp|B5XZD1|SUCC_KLEP3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150954147|gb|ABR76177.1| succinyl-CoA synthetase subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206566063|gb|ACI07839.1| succinate-CoA ligase, beta subunit [Klebsiella pneumoniae 342]
 gi|238546081|dbj|BAH62432.1| succinyl-CoA synthetase beta subunit [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|288891198|gb|ADC59516.1| succinyl-CoA synthetase, beta subunit [Klebsiella variicola At-22]
 gi|289777171|gb|EFD85169.1| succinyl-CoA ligase [ADP-forming] subunit beta [Klebsiella sp.
           1_1_55]
 gi|328538582|gb|EGF64686.1| succinate-CoA ligase, beta subunit [Klebsiella sp. MS 92-3]
          Length = 388

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|94498999|ref|ZP_01305537.1| Succinyl-CoA synthetase, beta subunit [Oceanobacter sp. RED65]
 gi|94428631|gb|EAT13603.1| Succinyl-CoA synthetase, beta subunit [Oceanobacter sp. RED65]
          Length = 388

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 206/397 (51%), Positives = 276/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV++GVV ++   AE A   +PG  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAAYGLPVSEGVVATTAQEAEQAADKIPGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS + +    +  LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKLVSSKQEIADFAQSWLGKNLVTYQTDENGQPVNQILVESCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+KI K  IDPL G        +   L L+
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPEKILKAEIDPLTGAQPYQAREIAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F DKD++LLE+NPL+I K+G L  LD+KI+ D NALY H DIQ
Sbjct: 171 DKQIKQFTQIFLGLSKLFFDKDLALLEVNPLVITKDGDLHCLDAKINVDSNALYAHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED RE EA + +L+Y+ALDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 AMHDPSQEDGREAEAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIIKLSGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++++AESGL++I A  L DAAQ++V A  G
Sbjct: 351 GNNAELGSKVLAESGLDIIAAESLTDAAQQVVKAAGG 387


>gi|29654690|ref|NP_820382.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 493]
 gi|30581057|sp|P53592|SUCC_COXBU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29541958|gb|AAO90896.1| succinyl-CoA synthetase beta chain [Coxiella burnetii RSA 493]
          Length = 390

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 276/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|308050195|ref|YP_003913761.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ferrimonas
           balearica DSM 9799]
 gi|307632385|gb|ADN76687.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ferrimonas
           balearica DSM 9799]
          Length = 388

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAEYGLPVSEGYACDTPQEAAEAAGKIGGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS + +    +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLASSKEEIREFAQHWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRGSQRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D +LLEINPL+I + G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTKIFMGLGQMFLDLDFALLEINPLVITEQGNLHCLDGKINIDSNALYRQPKVR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +AESGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGAQKLAESGLNIIAANSLTDAAQQVVKAAE 386


>gi|311280398|ref|YP_003942629.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae SCF1]
 gi|308749593|gb|ADO49345.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae SCF1]
          Length = 388

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 198/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACSTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|271499753|ref|YP_003332778.1| succinyl-CoA synthetase subunit beta [Dickeya dadantii Ech586]
 gi|270343308|gb|ACZ76073.1| succinyl-CoA synthetase, beta subunit [Dickeya dadantii Ech586]
          Length = 388

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDHSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|317047347|ref|YP_004114995.1| succinyl-CoA synthetase subunit beta [Pantoea sp. At-9b]
 gi|316948964|gb|ADU68439.1| succinyl-CoA synthetase, beta subunit [Pantoea sp. At-9b]
          Length = 388

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDAEGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLATMFLERDLALVEINPLVVTKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|156934780|ref|YP_001438696.1| succinyl-CoA synthetase subunit beta [Cronobacter sakazakii ATCC
           BAA-894]
 gi|189029908|sp|A7MQX5|SUCC_ENTS8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|156533034|gb|ABU77860.1| hypothetical protein ESA_02620 [Cronobacter sakazakii ATCC BAA-894]
          Length = 388

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 261/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARSGLPTPVGYACSTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKVFMGLANIFLERDLALIEINPLVITSQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|239818150|ref|YP_002947060.1| succinyl-CoA synthetase, subunit beta [Variovorax paradoxus S110]
 gi|239804727|gb|ACS21794.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus S110]
          Length = 388

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L K+ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILAKFGVPVPRGIPAYTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     EILG  L T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVKKLAGEILGMQLKTHQTGPEGQKVRRLYIEDGADINKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  +  DP  G+T E    + D + + 
Sbjct: 111 SAVTDRATQKVAFIASSEGGMDIEEVAHSSPEKIITVFADPEKGLTDEQAKQIADGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LY  + + D SL+EINPL     G++  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQTVDILKKLYTCYMETDASLVEINPLNRDSKGKVMALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED+ E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDAAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +V+ IL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNKNVEAILVNIFGGIMKCDTIATGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G +L+A+SGL +I+A  + DAAQK+V AVK
Sbjct: 351 GTNEVEGKKLLADSGLPIISADTMADAAQKVVAAVK 386


>gi|322514063|ref|ZP_08067134.1| succinyl-CoA ligase subunit beta [Actinobacillus ureae ATCC 25976]
 gi|322120080|gb|EFX92051.1| succinyl-CoA ligase subunit beta [Actinobacillus ureae ATCC 25976]
          Length = 388

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+ G+  ++ H A +AI+ L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFSQYQLPVSHGIACTNTHEALAAIQQLNGDIWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     +  G  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRNDADVREFCDKWFGQHLVTFQTDAHGQPVNTIYIEETCQIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             + DR+S  + F+AS  GGM+IE+VA+  P+ I K+ IDPL G  +     L   L L 
Sbjct: 111 GAVADRSSQKIVFMASCAGGMNIEDVAQQTPELIHKVTIDPLTGAQAFQGRELAFQLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F +KD++L+E+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFTHIFVQLANLFIEKDLALVEVNPLVLTKQGQLLCLDAKMVVDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 VLQDPSQEDPREAEAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKLILSDRNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVSLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +L+A SGL++I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGCQLLANSGLSLIAATTLTQAAQFTVTAAQG 387


>gi|165975911|ref|YP_001651504.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|307249682|ref|ZP_07531664.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307260934|ref|ZP_07542618.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|226733924|sp|B0BTV5|SUCC_ACTPJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|165876012|gb|ABY69060.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|306858291|gb|EFM90365.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306869373|gb|EFN01166.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 388

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCHQWLGQRLVTFQTDKNGQLVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRLIAANTLTQAAQLAVKAAEG 387


>gi|293397232|ref|ZP_06641505.1| succinyl-CoA ligase subunit beta [Serratia odorifera DSM 4582]
 gi|291420252|gb|EFE93508.1| succinyl-CoA ligase subunit beta [Serratia odorifera DSM 4582]
          Length = 388

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K+ IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFAKIFMGLATLFIERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDERESRAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|295677589|ref|YP_003606113.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1002]
 gi|295437432|gb|ADG16602.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDSEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I+A  +++AAQK+V A  G
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEEAAQKVVAAASG 387


>gi|171057186|ref|YP_001789535.1| succinyl-CoA synthetase subunit beta [Leptothrix cholodnii SP-6]
 gi|171059380|ref|YP_001791729.1| succinyl-CoA synthetase subunit beta [Leptothrix cholodnii SP-6]
 gi|170774631|gb|ACB32770.1| succinyl-CoA synthetase, beta subunit [Leptothrix cholodnii SP-6]
 gi|170776825|gb|ACB34964.1| succinyl-CoA synthetase, beta subunit [Leptothrix cholodnii SP-6]
          Length = 386

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ KA+LR++++PV +G    +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKAILRQFDIPVPRGHAAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDDVKKLAEQILGMQLVTHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR S  VAFIAS++GGMDIEEVA   P+KI   +IDPL G+ +E    +   + L 
Sbjct: 111 SLVTDRQSQKVAFIASSEGGMDIEEVAHSTPEKIITEVIDPLTGLGAEQAEKIARAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++      LF NLY+ + + D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 AESIAQAVTLFQNLYRCYMETDASLVEINPLNRDSKGGLIALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ACRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIAEGVITACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I A  + +AA  IV+AVK
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMAEAATAIVNAVK 386


>gi|165918982|ref|ZP_02219068.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 334]
 gi|165917307|gb|EDR35911.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 334]
          Length = 390

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 276/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|152996809|ref|YP_001341644.1| succinyl-CoA synthetase subunit beta [Marinomonas sp. MWYL1]
 gi|189081747|sp|A6VZ30|SUCC_MARMS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150837733|gb|ABR71709.1| succinyl-CoA synthetase, beta subunit [Marinomonas sp. MWYL1]
          Length = 388

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ G  + +  AA  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGYAVDTPEAAVEAAKKIGGNKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +  +  LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVDSYEEVAAFTQNWLGKNLVTYQTDANGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL+G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGAQPYQARELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L + F D D +LLEINPL+I   G L  LD KI  D NA+YR   +Q
Sbjct: 171 PTQIKQFTKVFLGLSQMFHDYDFALLEINPLVITDEGNLHCLDGKIGIDSNAVYRQKKMQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDEREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AV++V +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G  ++A SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAEKGREVLANSGLDIIAATSLKDAAEQVVKAAEG 387


>gi|194221896|ref|XP_001490027.2| PREDICTED: similar to succinate-CoA ligase, ADP-forming, beta
           subunit isoform 1 [Equus caballus]
          Length = 463

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI +SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALITDSGLKILACDDLDEAAKMVVKLSEIV 447


>gi|182416040|ref|YP_001821106.1| succinyl-CoA synthetase, beta subunit [Opitutus terrae PB90-1]
 gi|226734967|sp|B1ZP17|SUCC_OPITP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|177843254|gb|ACB77506.1| succinyl-CoA synthetase, beta subunit [Opitutus terrae PB90-1]
          Length = 393

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 203/395 (51%), Positives = 271/395 (68%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKAL  K+ V V KG    +     +A+  LP  + VVKSQIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQLPEGMIVVKSQIHAGGRGKGTFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV+V  S         ++LG+TL+T QTGP G +V  +Y   G+ I +E YL
Sbjct: 61  D---GFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AST+GGM+IE+VA D P +IFK+ +DP  G+    V  L   L   
Sbjct: 118 AILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFT 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L   LY+ F + D S++E+NPLI   +G++  LD+K++FDDNAL+RH ++ 
Sbjct: 178 AAEGKNASKLIRALYRCFWENDASMVEVNPLITTPDGQVEALDAKVAFDDNALFRHPELV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +H L+YIALDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 238 ELRDLNEEDPKEIEASKHELNYIALDGNIACLVNGAGLAMSTMDIIKHFGGTPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V AAFKII  D +V+GIL+NIFGGIM C+V+ +GI+ AVKEV + +PLV+RLE
Sbjct: 298 GGASREQVVAAFKIILGDKNVRGILVNIFGGIMDCNVIAQGIVDAVKEVGLELPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +++   + DAAQKIV  V
Sbjct: 358 GNNVAAGKATLATSGLKLVSGDSMADAAQKIVKLV 392


>gi|258545093|ref|ZP_05705327.1| succinyl-CoA ligase [ADP-forming] subunit beta [Cardiobacterium
           hominis ATCC 15826]
 gi|258519670|gb|EEV88529.1| succinyl-CoA ligase [ADP-forming] subunit beta [Cardiobacterium
           hominis ATCC 15826]
          Length = 386

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 194/386 (50%), Positives = 267/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL R Y V   + ++  +   A +A + L G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFRAYGVDTPRSILAKNADEAVAAAQELGGSVWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   +++G+TL TKQTG  G  +N V +E+G DI  ELY+
Sbjct: 58  -------GGVKVAKSLDEVRAHASQMIGNTLKTKQTGEVGLPINMVLIEEGLDIADELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V+FIAS +GGMDIEEVA+  P+KI  + +DP  G        L   + L 
Sbjct: 111 SAVVDRASRRVSFIASAEGGMDIEEVAEKSPEKIHSVGVDPSAGYFPYVGRRLGFAMGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L   LY  F DKD+S++EINPLI+  +G+L  LD+KI  DDNALYRH D+ 
Sbjct: 171 KKQVGQLATLLQGLYNLFTDKDLSMVEINPLIVTGDGKLLALDAKIGVDDNALYRHKDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD ++ED+RE +A++  L+Y+ALDGNIGCMVNGAGLAMATMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPTQEDARENQAQELELNYVALDGNIGCMVNGAGLAMATMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+I +   VK IL+NIFGGI+RCD++ +GI++A KE+ + +P++ RL+
Sbjct: 291 GGATAERVKEAFKLILTSPEVKSILVNIFGGIVRCDLIAEGIINAAKEIDLKVPVIARLQ 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV++G +++ ESGL + +A DL D
Sbjct: 351 GTNVELGRKMLDESGLGITSADDLTD 376


>gi|260597126|ref|YP_003209697.1| succinyl-CoA synthetase subunit beta [Cronobacter turicensis z3032]
 gi|260216303|emb|CBA29275.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Cronobacter
           turicensis z3032]
          Length = 388

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 261/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARSGLPTPVGYACSTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKVFMGLATIFLERDLALIEINPLVITSQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|153207681|ref|ZP_01946328.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           'MSU Goat Q177']
 gi|212218994|ref|YP_002305781.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii CbuK_Q154]
 gi|226734939|sp|B6J8N7|SUCC_COXB1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120576377|gb|EAX33001.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           'MSU Goat Q177']
 gi|212013256|gb|ACJ20636.1| succinyl-CoA synthetase beta chain [Coxiella burnetii CbuK_Q154]
          Length = 390

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 276/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIASDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|269103073|ref|ZP_06155770.1| succinyl-CoA ligase [ADP-forming] beta chain [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162971|gb|EEZ41467.1| succinyl-CoA ligase [ADP-forming] beta chain [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 388

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G   S+   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACSTPQEAAEAAGKIGGEKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + + +  ++ LG  L+T QT   G  V+ + VE  ++I  ELYL
Sbjct: 58  -------GGVELHETKEGIKTFSQQWLGKHLVTYQTDANGQPVSKILVEAASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASQRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLEINPL+I  +G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTQIFLGLGKMFTDYDLALLEINPLVITDDGNLLCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIAEGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G   +AESGLN+I A  L +AA+K+V A +G
Sbjct: 351 GNNAELGAAKLAESGLNIIAATSLTEAAEKVVQAAEG 387


>gi|292487655|ref|YP_003530528.1| succinyl-CoA synthetase subunit beta [Erwinia amylovora CFBP1430]
 gi|292898892|ref|YP_003538261.1| succinyl-CoA synthetase subunit beta [Erwinia amylovora ATCC 49946]
 gi|291198740|emb|CBJ45849.1| succinyl-CoA synthetase beta chain [Erwinia amylovora ATCC 49946]
 gi|291553075|emb|CBA20120.1| succinyl-CoA synthetase beta chain [Erwinia amylovora CFBP1430]
 gi|312171763|emb|CBX80021.1| succinyl-CoA synthetase beta chain [Erwinia amylovora ATCC
           BAA-2158]
          Length = 388

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRTFAENWLGKRLVTYQTDAGGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVVTKQGDLVCLDGKLTADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|193215966|ref|YP_001997165.1| succinyl-CoA synthetase subunit beta [Chloroherpeton thalassium
           ATCC 35110]
 gi|226734937|sp|B3QWF8|SUCC_CHLT3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|193089443|gb|ACF14718.1| succinyl-CoA synthetase, beta subunit [Chloroherpeton thalassium
           ATCC 35110]
          Length = 392

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/399 (47%), Positives = 264/399 (66%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LR + V V KG+V  S   A+ A +TL     G + VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKEILRGFGVTVPKGIVAFSAEEAKKAAETLLTEQGGGVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S         +++G+TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLVRSADEAFEVATQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYL + +DR +     + ST+GGM+IE+VA++ P+K+ K+ I P +G+           
Sbjct: 111 ELYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQIHPTLGLQPNQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +       LY A+   D SL EINPL++ K GR+  LD+KI+FDDNAL+RH
Sbjct: 171 LGLEGEQFKNAVKFISALYNAYMKADCSLAEINPLVVTKEGRVIALDAKINFDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  +LRD SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KDYIDLRDTSEEDPLEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+   V   F+II +D +VK IL+NIFGGI+RCD +  G++ A K + I++P++
Sbjct: 291 LDVGGGANPQTVQEGFRIILTDPNVKAILVNIFGGIVRCDRVAGGVIEAAKNIDIHVPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N DI  +++ ESGLN+++A  L DAA+K+  A+
Sbjct: 351 VRLEGTNADIAQKMLDESGLNLVSAKGLSDAAKKVNEAL 389


>gi|262041210|ref|ZP_06014422.1| succinyl-CoA ligase subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041439|gb|EEW42498.1| succinyl-CoA ligase subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 388

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+A DGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVAQDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|296103343|ref|YP_003613489.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057802|gb|ADF62540.1| succinyl-CoA synthetase, beta subunit [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 388

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|190149798|ref|YP_001968323.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303250244|ref|ZP_07336444.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252009|ref|ZP_07533909.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307263118|ref|ZP_07544739.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|226733923|sp|B3GX29|SUCC_ACTP7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189914929|gb|ACE61181.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302650860|gb|EFL81016.1| succinyl-CoA synthetase beta chain [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860478|gb|EFM92491.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306871480|gb|EFN03203.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 388

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQPVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A S L +I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSSLRLIAANTLTQAAQLAVKAAEG 387


>gi|119945910|ref|YP_943590.1| succinyl-CoA synthetase, beta subunit [Psychromonas ingrahamii 37]
 gi|189081774|sp|A1SWX6|SUCC_PSYIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119864514|gb|ABM03991.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychromonas
           ingrahamii 37]
          Length = 388

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L R+Y +PV +G+   +   A SA   + G  +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFREYGLPVPQGIACDTAEEAVSAASQIGGDKWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV + S+   +     + LG  L+T QT   G  VN + VE  +DI  ELYL
Sbjct: 58  -------GGVELVSTKDGLREFAHKWLGKNLVTFQTDANGQPVNKLLVESCSDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG++IE+VA++ P+ I   +IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRASQRVTFMASTEGGVEIEKVAEETPELIHTAMIDPLVGAQAYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F +KD+SLLEINPL++     L  LD KIS D NA+YR   + 
Sbjct: 171 GKQIGQFTKIFLGLATLFEEKDLSLLEINPLVVTAQDDLICLDGKISIDSNAMYRQKALH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +++D RE+ A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AINDTTQDDEREMHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVHLHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  G++ AV EV + +P+++RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGVIGAVAEVGVTVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGLN+I A  L DAA++ V AV G
Sbjct: 351 GNNADLGRKILAESGLNIIAAASLTDAAEQAVKAVGG 387


>gi|268679715|ref|YP_003304146.1| succinyl-CoA synthetase subunit beta [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617746|gb|ACZ12111.1| succinyl-CoA synthetase, beta subunit [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 391

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/398 (47%), Positives = 253/398 (63%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K + R+Y V   +G V +SV  A      L G L+VVK+QIHAGGRG     
Sbjct: 1   MNIHEYQSKEIFRRYGVATPRGYVATSVEEAVENAHKLGGALWVVKAQIHAGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V    + +LG  L+T QTGP G+ V  VY+E+G DI  E YL
Sbjct: 58  -------GGVKLARSIEEVARYTQSLLGKNLVTHQTGPLGTVVQKVYIEEGMDIADEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR   M   +AS +GGM+IE++A + P+KI K+ IDP IG        L   L L 
Sbjct: 111 GIVLDRAQEMPVIMASREGGMEIEKIAHETPEKIIKVTIDPFIGFQPYHGRELAFGLSLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D       LY+A+ D D S++EINPL+  K GR   LD K+SFDDNAL+RH +I 
Sbjct: 171 KEEMADFIAFAKALYQAYMDNDASMIEINPLVKTKQGRFIALDGKMSFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD SEE+  E EA ++ LSY+ L+GN+GCMVNGAGLAM TMDII   GG PANFLDVG
Sbjct: 231 AMRDYSEENPIEREASEYGLSYVKLNGNVGCMVNGAGLAMGTMDIIDYMGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+   VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K V +++P+++RL+
Sbjct: 291 GGANASTVAKGFEIILKDPNVKSIFVNIFGGIVRCDRIANGILEATKMVNVHVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      ++  + + N+I+A DL D AQK V A KG
Sbjct: 351 GTNAKEAVEILKNANIKNIISATDLSDGAQKAVAAAKG 388


>gi|198242608|ref|YP_002214706.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|226734982|sp|B5FNF9|SUCC_SALDC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|197937124|gb|ACH74457.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326622462|gb|EGE28807.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 388

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|307245291|ref|ZP_07527379.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254240|ref|ZP_07536081.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258702|ref|ZP_07540434.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853632|gb|EFM85849.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862787|gb|EFM94740.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867053|gb|EFM98909.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 388

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV+KG+V  S+  A SAI TL G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYRLPVSKGIVCHSLDDAVSAIHTLAGDTWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  S   +     + LG  L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGIKLVRSEAEIREFCNQWLGQRLVTFQTDKNGQLVNTIYLEETCLIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+AS  GGM+IE+VA   P+ I K  IDPL G  +     L   L L 
Sbjct: 111 GAVIDRSSQKIVFMASNAGGMNIEDVAAQTPELIHKATIDPLTGAQAFQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  L K F +KD++LLE+NPL++ K G+L  LD+K+  D NALYRH +++
Sbjct: 171 GDQIKQFAHLFVQLAKLFIEKDLALLEVNPLVLTKQGQLLCLDAKMVIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED+RE +A + +L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDAREADAAKWDLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV INIP+++RLE
Sbjct: 291 GGATKERVSEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGINIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL  I A  L  AAQ  V A +G
Sbjct: 351 GTNAELGREILANSGLRFIAANTLTQAAQLAVKAAEG 387


>gi|259909076|ref|YP_002649432.1| succinyl-CoA synthetase subunit beta [Erwinia pyrifoliae Ep1/96]
 gi|224964698|emb|CAX56215.1| Succinyl-CoA synthetase beta chain [Erwinia pyrifoliae Ep1/96]
 gi|283479102|emb|CAY75018.1| succinyl-CoA synthetase beta chain [Erwinia pyrifoliae DSM 12163]
          Length = 388

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDAGGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLTADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|91790511|ref|YP_551463.1| succinyl-CoA synthetase subunit beta [Polaromonas sp. JS666]
 gi|123355075|sp|Q122H7|SUCC_POLSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91699736|gb|ABE46565.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Polaromonas sp.
           JS666]
          Length = 386

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  ++  V     EILG  L T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKTIDDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR S  VAFIAS++GGMDIEEVA   P+KI K+ +DPL+G+T      +   + + 
Sbjct: 111 SAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LYK + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIADGVITACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++A+SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMAEAATKIVAAVK 386


>gi|332841274|ref|XP_001150944.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 3 [Pan troglodytes]
          Length = 482

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 72  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 131

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 132 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 188

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 189 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 248

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 249 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 308

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 309 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 368

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 369 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 428

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 429 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 466


>gi|304395709|ref|ZP_07377592.1| succinyl-CoA synthetase, beta subunit [Pantoea sp. aB]
 gi|308186073|ref|YP_003930204.1| Succinyl-CoA synthetase, beta subunit [Pantoea vagans C9-1]
 gi|304357003|gb|EFM21367.1| succinyl-CoA synthetase, beta subunit [Pantoea sp. aB]
 gi|308056583|gb|ADO08755.1| Succinyl-CoA synthetase, beta subunit [Pantoea vagans C9-1]
          Length = 388

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVIFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKLVGQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|110834354|ref|YP_693213.1| succinyl-CoA synthetase subunit beta [Alcanivorax borkumensis SK2]
 gi|122959452|sp|Q0VPF7|SUCC_ALCBS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110647465|emb|CAL16941.1| succinyl-CoA synthetase, beta subunit [Alcanivorax borkumensis SK2]
          Length = 389

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L   Y +PV+ G    +     +  K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFADYGLPVSTGFACDTPEEVAAKAKEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDTPEDAAAFAKKWLGKQLVTFQTDEHGQPVSKILVETCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V F+AST+GG+DIE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 SAVLDRASRRVVFMASTEGGVDIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F DKD++L+E+NPL+I   G L  LD+KI+ D +ALYRH DI+
Sbjct: 171 GKQVNQFAKIFVGLAKLFVDKDLALIEVNPLVITDTGDLHCLDAKINVDGSALYRHPDIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+ED RE  A + +L+Y+AL+GNIGCMVNGAGLAM TMD++KL GGAPANFLDVG
Sbjct: 231 ALDDPSQEDERERRAAEWDLNYVALEGNIGCMVNGAGLAMGTMDLVKLKGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VKG+L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDQVKGVLVNIFGGIVRCDLIAEGIIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++ +AESG+N+I A   DDAA+++V AV G
Sbjct: 351 GNNAELGSQKLAESGMNIIAAQSFDDAAEQVVKAVGG 387


>gi|260866858|ref|YP_003233260.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O111:H-
           str. 11128]
 gi|257763214|dbj|BAI34709.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O111:H-
           str. 11128]
 gi|323180034|gb|EFZ65590.1| succinyl-CoA synthetase beta chain [Escherichia coli 1180]
          Length = 388

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G+       L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGLMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|310767024|gb|ADP11974.1| succinyl-CoA synthetase subunit beta [Erwinia sp. Ejp617]
          Length = 388

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDAGGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLTADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|270263774|ref|ZP_06192043.1| succinyl-CoA synthetase subunit beta [Serratia odorifera 4Rx13]
 gi|270042658|gb|EFA15753.1| succinyl-CoA synthetase subunit beta [Serratia odorifera 4Rx13]
          Length = 388

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K+ IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVGQFAKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDERESRAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|319796538|ref|YP_004158178.1| succinyL-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
 gi|315599001|gb|ADU40067.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
          Length = 388

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L K+ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILAKFGVPVPRGIPAYTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     EILG  L T QTGP G +V  +Y+EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSIEDVKKLAGEILGMQLKTHQTGPEGQKVRRLYIEDGADINKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  +  DP  G+T E    + D + + 
Sbjct: 111 SAVTDRATQKVAFIASSEGGMDIEEVAHSSPEKIITVFADPEKGLTDEQAKQIADGIGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LY  + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSTAQTVDILKKLYACYMETDASLVEINPLNRDSKGNVMALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED+ E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDAAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +V+ IL+NIFGGIM+CD +  G+++A K V + +PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNKNVEAILVNIFGGIMKCDTIATGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G +L+A+SGL +I+A  + DAAQK+V AVK
Sbjct: 351 GTNEVEGKKLLADSGLPIISADTMADAAQKVVAAVK 386


>gi|291616730|ref|YP_003519472.1| SucC [Pantoea ananatis LMG 20103]
 gi|291151760|gb|ADD76344.1| SucC [Pantoea ananatis LMG 20103]
 gi|327393156|dbj|BAK10578.1| succinyl-CoA synthetase beta chain SucC [Pantoea ananatis AJ13355]
          Length = 388

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVIFMASTEGGVEIEKVAEETPHLIHKMALDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLATMFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+K +GG PANFLDVG
Sbjct: 231 EMRDPSQEDPREAHATQWELNYVALEGNIGCMVNGAGLAMGTMDIVKHHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQRVVAAAEG 387


>gi|326319398|ref|YP_004237070.1| succinyl-CoA synthetase subunit beta [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323376234|gb|ADX48503.1| succinyl-CoA synthetase, beta subunit [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 386

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR + VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     +ILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKKLAGDILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P KI   +IDP+ G+T+E    +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPDKIVTEMIDPIAGITTEQSKKVAAAIGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     D+F  +YK + + D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 GASVDQAVDIFAKIYKCYMETDASLVEINPLNCDSKGNLMALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AFRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  V+GIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVEGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEELGKKMLAESGLPIIAADTMAEAATKIVAAVK 386


>gi|310814643|ref|YP_003962607.1| succinyl-CoA synthetase subunit beta [Ketogulonicigenium vulgare
           Y25]
 gi|308753378|gb|ADO41307.1| succinyl-CoA synthetase subunit beta [Ketogulonicigenium vulgare
           Y25]
          Length = 405

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 228/396 (57%), Positives = 288/396 (72%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LLR Y +PV  G +I +   A+ A   L GPL+VVK+QIHAGGRGKG F 
Sbjct: 1   MNIHEYQAKGLLRDYQIPVGAGQIILNSRDADQAAAALQGPLWVVKAQIHAGGRGKGHFI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A + GGVR+  S        R++L +TL+T QTGP G +V  VY+E GADI RELYL
Sbjct: 61  EEAAGAGGGVRLARSASEAAQIARQMLDNTLVTVQTGPKGRKVGRVYLEAGADIARELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +  ++F+ ST+GG+DIE VA   P+K+  + +DP  G       ++   LEL 
Sbjct: 121 ALLIDRKTSRISFVCSTEGGVDIEHVAATTPEKVITIAVDPATGFQQWHGRAIAFALELS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   L  NLY+AF ++DM +LEINPLI+   G L  LD+K+ FD+NALYRH +I 
Sbjct: 181 GAQIKECVALTGNLYRAFTERDMEMLEINPLIVTPAGHLHCLDAKVGFDNNALYRHPEIA 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED +E+ A + +L+YI LDG+IGCMVNGAGLAMATMDIIKLYG APANFLDVG
Sbjct: 241 ALRDEAEEDEKELAASKFDLNYITLDGSIGCMVNGAGLAMATMDIIKLYGSAPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD +V+GIL+NIFGGIMRCD++  GI++AV+EV + +PLV+RLE
Sbjct: 301 GGASKEKVTEAFKIITSDPNVQGILVNIFGGIMRCDIIADGIIAAVREVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+IG  +I  SGLNVI A DL DAAQKIV AVK
Sbjct: 361 GTNVEIGKDIIRNSGLNVIPADDLADAAQKIVAAVK 396


>gi|325520207|gb|EGC99381.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. TJI49]
          Length = 388

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I+A  +++AAQK+V A +G
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEEAAQKVVAAAEG 387


>gi|22126941|ref|NP_670364.1| succinyl-CoA synthetase subunit beta [Yersinia pestis KIM 10]
 gi|45440875|ref|NP_992414.1| succinyl-CoA synthetase subunit beta [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595493|ref|YP_069684.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           IP 32953]
 gi|108806590|ref|YP_650506.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Antiqua]
 gi|108813043|ref|YP_648810.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Nepal516]
 gi|145599847|ref|YP_001163923.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Pestoides F]
 gi|149366885|ref|ZP_01888919.1| succinyl-CoA synthetase beta chain [Yersinia pestis CA88-4125]
 gi|153947821|ref|YP_001401842.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421006|ref|YP_001605912.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Angola]
 gi|165924409|ref|ZP_02220241.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938347|ref|ZP_02226905.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011597|ref|ZP_02232495.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211256|ref|ZP_02237291.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400066|ref|ZP_02305584.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419494|ref|ZP_02311247.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424363|ref|ZP_02316116.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468938|ref|ZP_02333642.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis FV-1]
 gi|170025188|ref|YP_001721693.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           YPIII]
 gi|186894546|ref|YP_001871658.1| succinyl-CoA synthetase subunit beta [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928283|ref|YP_002346158.1| succinyl-CoA synthetase subunit beta [Yersinia pestis CO92]
 gi|229841051|ref|ZP_04461210.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843155|ref|ZP_04463301.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229893992|ref|ZP_04509178.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Pestoides A]
 gi|229903484|ref|ZP_04518597.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Nepal516]
 gi|270487265|ref|ZP_06204339.1| succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia pestis KIM
           D27]
 gi|294503122|ref|YP_003567184.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Z176003]
 gi|21264038|sp|Q8ZH00|SUCC_YERPE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417494|sp|Q66DA0|SUCC_YERPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122979766|sp|Q1CAG1|SUCC_YERPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122980014|sp|Q1CFM0|SUCC_YERPN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030228|sp|A7FKR4|SUCC_YERP3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030229|sp|A4TNT8|SUCC_YERPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735002|sp|B2K8F1|SUCC_YERPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735003|sp|A9R2F2|SUCC_YERPG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735004|sp|B1JG57|SUCC_YERPY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21959981|gb|AAM86615.1|AE013907_9 succinyl-CoA synthetase, beta subunit [Yersinia pestis KIM 10]
 gi|45435733|gb|AAS61291.1| succinyl-CoA synthetase beta chain [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588775|emb|CAH20389.1| succinyl-CoA synthetase beta chain [Yersinia pseudotuberculosis IP
           32953]
 gi|108776691|gb|ABG19210.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Yersinia pestis
           Nepal516]
 gi|108778503|gb|ABG12561.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Yersinia pestis
           Antiqua]
 gi|115346894|emb|CAL19781.1| succinyl-CoA synthetase beta chain [Yersinia pestis CO92]
 gi|145211543|gb|ABP40950.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Yersinia pestis
           Pestoides F]
 gi|149291259|gb|EDM41334.1| succinyl-CoA synthetase beta chain [Yersinia pestis CA88-4125]
 gi|152959316|gb|ABS46777.1| succinyl-CoA synthetase, beta subunit [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353821|gb|ABX87769.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Angola]
 gi|165913725|gb|EDR32344.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923469|gb|EDR40601.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989545|gb|EDR41846.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207027|gb|EDR51507.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962235|gb|EDR58256.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050774|gb|EDR62182.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057212|gb|EDR66975.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751722|gb|ACA69240.1| succinyl-CoA synthetase, beta subunit [Yersinia pseudotuberculosis
           YPIII]
 gi|186697572|gb|ACC88201.1| succinyl-CoA synthetase, beta subunit [Yersinia pseudotuberculosis
           PB1/+]
 gi|229679254|gb|EEO75357.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Nepal516]
 gi|229689502|gb|EEO81563.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697417|gb|EEO87464.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229703877|gb|EEO90890.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis Pestoides A]
 gi|262361158|gb|ACY57879.1| succinyl-CoA synthetase subunit beta [Yersinia pestis D106004]
 gi|262365287|gb|ACY61844.1| succinyl-CoA synthetase subunit beta [Yersinia pestis D182038]
 gi|270335769|gb|EFA46546.1| succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia pestis KIM
           D27]
 gi|294353581|gb|ADE63922.1| succinyl-CoA synthetase subunit beta [Yersinia pestis Z176003]
 gi|320014254|gb|ADV97825.1| succinyl-CoA synthetase, beta subunit [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 388

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 188/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|319956115|ref|YP_004167378.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitratifractor
           salsuginis DSM 16511]
 gi|319418519|gb|ADV45629.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitratifractor
           salsuginis DSM 16511]
          Length = 390

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 203/398 (51%), Positives = 258/398 (64%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK + RKYNVPV +G V  +V  A  A K L G L+VVK+QIHA         
Sbjct: 1   MNIHEYQAKEIFRKYNVPVPRGKVAFTVDEAVEAAKELGGNLWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG TL+T QTGP G  V+ VY+E+GADI +E YL
Sbjct: 52  -GGRGLGGGVKLAKSIDEVRHWADEILGMTLVTHQTGPEGKVVHKVYIEEGADIAKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR + M   +AST+GGM+IE+VA + P+KI K+ IDP IG        L   L L 
Sbjct: 111 GMLLDRAAEMPVMMASTEGGMEIEKVAAETPEKIVKVTIDPTIGFQGFHGRKLAFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY A+ D D  ++EINPLI   +G+   LD+K+ FDDNALYRH DI 
Sbjct: 171 KEEIGTFIKFASALYNAYMDNDAEMIEINPLIKTGDGKFLALDAKMGFDDNALYRHPDIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EE+  E+EAK H LSYI LDGN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 EMRDLEEEEPTELEAKAHGLSYIKLDGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K   +N+P+V+RL+
Sbjct: 291 GGANPETVAKGFEIILKDPNVKAIFVNIFGGIVRCDRVANGILEATKITDVNVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N D    ++  + + N+I A +L D A+K V A KG
Sbjct: 351 GTNADEAAEILKNANIENIIAAENLADGARKAVAAAKG 388


>gi|190571356|ref|YP_001975714.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213018752|ref|ZP_03334560.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|226734997|sp|B3CME9|SUCC_WOLPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|190357628|emb|CAQ55069.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212995703|gb|EEB56343.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 386

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 215/396 (54%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NVPV KG V +S    E+ I  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILHKFNVPVPKGFVATSAEGVETQINQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++     ++ +LG TL+T QTGP+G +V  +Y+E+G+ I +E YL
Sbjct: 58  -------GGVKLAKSVEEAQQFVKNMLGITLVTHQTGPSGQQVRRIYIEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VD     + FI S++GGMDIEEVAK+ P KI K  IDP  G T+ D + L +   L 
Sbjct: 111 SLVVDPKLSRLVFIFSSEGGMDIEEVAKNSPTKIVKFDIDPATGFTNLDNSKLANNFNLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  N+Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 171 SEQIERITNIAKNIYDAFITTDASQIEINPLVETNSGDFVALDAKINFDDNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 QLRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 291 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +L DAAQKIV  VK
Sbjct: 351 GTNFEEGKKILEESGLNIIAADELGDAAQKIVKEVK 386


>gi|157146665|ref|YP_001453983.1| succinyl-CoA synthetase subunit beta [Citrobacter koseri ATCC
           BAA-895]
 gi|157083870|gb|ABV13548.1| hypothetical protein CKO_02431 [Citrobacter koseri ATCC BAA-895]
          Length = 388

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|253687632|ref|YP_003016822.1| succinyl-CoA synthetase, beta subunit [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|259511787|sp|C6DCD6|SUCC_PECCP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|251754210|gb|ACT12286.1| succinyl-CoA synthetase, beta subunit [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 388

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L  AAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAVEG 387


>gi|167585555|ref|ZP_02377943.1| succinyl-CoA synthetase subunit beta [Burkholderia ubonensis Bu]
          Length = 388

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++A+SGL +I+A  +++AAQK+V A +G
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEEAAQKVVAAAEG 387


>gi|149177237|ref|ZP_01855843.1| succinyl-CoA synthetase (beta subunit) [Planctomyces maris DSM
           8797]
 gi|148843951|gb|EDL58308.1| succinyl-CoA synthetase (beta subunit) [Planctomyces maris DSM
           8797]
          Length = 395

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/393 (49%), Positives = 267/393 (67%), Gaps = 2/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L R+  +PV +G+V  +V  A +A + L  PL VVKSQIHAGGRGKGRFK
Sbjct: 1   MKIHEYQAKQLFREAGIPVPEGIVAKTVDEAVAAFEKLDRPLVVVKSQIHAGGRGKGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   + GV +  S + V  +   +LGSTL+T QTG  G +VN +++E G DI +ELYL
Sbjct: 61  EYP--EQAGVVLARSAEEVRENAERMLGSTLVTIQTGEEGKQVNTLFIEQGLDIAQELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +G    I ST+GGM+IE VA++ P+KI         G+       L   L ++
Sbjct: 119 GCVVDREAGGPVLILSTEGGMEIEVVAEESPEKILSEPFSIHTGLLGFQARKLAFKLGME 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           + + F D D S+ EINPL+I   G L  LD+K+SFD+NA++RH  ++
Sbjct: 179 GKTVRSAEKFLCQMSRFFIDNDCSMTEINPLVITGEGELVALDAKVSFDENAMFRHKPLE 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E++A    LSY+ LDGNIGC+VNGAGLAM+TMD+IK +GG PANFLDVG
Sbjct: 239 ELRDLTEEEPAEVDAGNAGLSYVKLDGNIGCLVNGAGLAMSTMDLIKHHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D+V+ AF+II +D +VK +L+NIFGGIM+CD +V  +L A ++V   +PLV+RLE
Sbjct: 299 GGANVDQVSEAFRIILADDNVKAVLVNIFGGIMKCDTIVTALLEAYEKVGFTVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NVD    ++A SG ++I+A DL DAAQK+V 
Sbjct: 359 GTNVDKAREMLAGSGRDIISATDLTDAAQKVVA 391


>gi|161830287|ref|YP_001597238.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii RSA 331]
 gi|189029904|sp|A9N8R8|SUCC_COXBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161762154|gb|ABX77796.1| succinate-CoA ligase (ADP-forming), beta subunit [Coxiella burnetii
           RSA 331]
          Length = 390

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 275/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+S +N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSDMNIIAAKGFADAAEQIVKQV 386


>gi|188534429|ref|YP_001908226.1| succinyl-CoA synthetase subunit beta [Erwinia tasmaniensis Et1/99]
 gi|226734952|sp|B2VBR6|SUCC_ERWT9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|188029471|emb|CAO97348.1| Succinyl-CoA synthetase beta chain [Erwinia tasmaniensis Et1/99]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT  +G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDASGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K++ D NAL+R  D++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVVTKQGDLVCLDGKLTADGNALFRQSDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGARKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|154706461|ref|YP_001424006.1| succinyl-CoA synthetase subunit beta [Coxiella burnetii Dugway
           5J108-111]
 gi|189029903|sp|A9KBQ4|SUCC_COXBN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|154355747|gb|ABS77209.1| succinyl-CoA synthetase beta chain [Coxiella burnetii Dugway
           5J108-111]
          Length = 390

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 275/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ +DP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AF+II SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFRIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+S +N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSSMNIIAAKGFADAAEQIVKQV 386


>gi|300918387|ref|ZP_07134987.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           115-1]
 gi|300937816|ref|ZP_07152612.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           21-1]
 gi|300414450|gb|EFJ97760.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           115-1]
 gi|300457181|gb|EFK20674.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           21-1]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|15800432|ref|NP_286444.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7
           EDL933]
 gi|15830007|ref|NP_308780.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           Sakai]
 gi|16128703|ref|NP_415256.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|24111996|ref|NP_706506.1| succinyl-CoA synthetase subunit beta [Shigella flexneri 2a str.
           301]
 gi|26246695|ref|NP_752735.1| succinyl-CoA synthetase subunit beta [Escherichia coli CFT073]
 gi|30062109|ref|NP_836280.1| succinyl-CoA synthetase subunit beta [Shigella flexneri 2a str.
           2457T]
 gi|74311252|ref|YP_309671.1| succinyl-CoA synthetase subunit beta [Shigella sonnei Ss046]
 gi|89107585|ref|AP_001365.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|91209761|ref|YP_539747.1| succinyl-CoA synthetase subunit beta [Escherichia coli UTI89]
 gi|110640936|ref|YP_668664.1| succinyl-CoA synthetase subunit beta [Escherichia coli 536]
 gi|117622921|ref|YP_851834.1| succinyl-CoA synthetase subunit beta [Escherichia coli APEC O1]
 gi|157156644|ref|YP_001461887.1| succinyl-CoA synthetase subunit beta [Escherichia coli E24377A]
 gi|157160207|ref|YP_001457525.1| succinyl-CoA synthetase subunit beta [Escherichia coli HS]
 gi|168750659|ref|ZP_02775681.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168757181|ref|ZP_02782188.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764009|ref|ZP_02789016.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168767168|ref|ZP_02792175.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777544|ref|ZP_02802551.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779211|ref|ZP_02804218.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786881|ref|ZP_02811888.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|168801363|ref|ZP_02826370.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|170020928|ref|YP_001725882.1| succinyl-CoA synthetase subunit beta [Escherichia coli ATCC 8739]
 gi|170080394|ref|YP_001729714.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683514|ref|YP_001742828.1| succinyl-CoA synthetase subunit beta [Escherichia coli SMS-3-5]
 gi|188493233|ref|ZP_03000503.1| succinyl-CoA synthetase, beta chain [Escherichia coli 53638]
 gi|191167222|ref|ZP_03029041.1| succinate-CoA ligase, beta subunit [Escherichia coli B7A]
 gi|191174058|ref|ZP_03035574.1| succinate-CoA ligase, beta subunit [Escherichia coli F11]
 gi|193065521|ref|ZP_03046589.1| succinate-CoA ligase, beta subunit [Escherichia coli E22]
 gi|194429053|ref|ZP_03061584.1| succinate-CoA ligase, beta subunit [Escherichia coli B171]
 gi|194433995|ref|ZP_03066266.1| succinate-CoA ligase, beta subunit [Shigella dysenteriae 1012]
 gi|194439223|ref|ZP_03071303.1| succinate-CoA ligase, beta subunit [Escherichia coli 101-1]
 gi|195939069|ref|ZP_03084451.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           EC4024]
 gi|208815204|ref|ZP_03256383.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822988|ref|ZP_03263306.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209397431|ref|YP_002269351.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209917978|ref|YP_002292062.1| succinyl-CoA synthetase subunit beta [Escherichia coli SE11]
 gi|217324788|ref|ZP_03440872.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218549708|ref|YP_002383499.1| succinyl-CoA synthetase subunit beta [Escherichia fergusonii ATCC
           35469]
 gi|218557643|ref|YP_002390556.1| succinyl-CoA synthetase subunit beta [Escherichia coli S88]
 gi|218688521|ref|YP_002396733.1| succinyl-CoA synthetase subunit beta [Escherichia coli ED1a]
 gi|218694151|ref|YP_002401818.1| succinyl-CoA synthetase subunit beta [Escherichia coli 55989]
 gi|218699082|ref|YP_002406711.1| succinyl-CoA synthetase subunit beta [Escherichia coli IAI39]
 gi|218704044|ref|YP_002411563.1| succinyl-CoA synthetase subunit beta [Escherichia coli UMN026]
 gi|227884306|ref|ZP_04002111.1| succinyl-CoA synthetase subunit beta [Escherichia coli 83972]
 gi|237707310|ref|ZP_04537791.1| succinyl-CoA synthetase subunit beta [Escherichia sp. 3_2_53FAA]
 gi|238899992|ref|YP_002925788.1| succinyl-CoA synthetase, beta subunit [Escherichia coli BW2952]
 gi|253774302|ref|YP_003037133.1| succinyl-CoA synthetase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160797|ref|YP_003043905.1| succinyl-CoA synthetase subunit beta [Escherichia coli B str.
           REL606]
 gi|254791874|ref|YP_003076711.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021199|ref|ZP_05435064.1| succinyl-CoA synthetase subunit beta [Shigella sp. D9]
 gi|256023671|ref|ZP_05437536.1| succinyl-CoA synthetase subunit beta [Escherichia sp. 4_1_40B]
 gi|260842934|ref|YP_003220712.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O103:H2
           str. 12009]
 gi|260853962|ref|YP_003227853.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O26:H11
           str. 11368]
 gi|261224428|ref|ZP_05938709.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261254581|ref|ZP_05947114.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281660|ref|YP_003498478.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           O55:H7 str. CB9615]
 gi|293403971|ref|ZP_06647965.1| sucC [Escherichia coli FVEC1412]
 gi|293409101|ref|ZP_06652677.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293414005|ref|ZP_06656654.1| succinyl-CoA ligase subunit beta [Escherichia coli B185]
 gi|293432996|ref|ZP_06661424.1| succinyl-CoA ligase subunit beta [Escherichia coli B088]
 gi|297521615|ref|ZP_06940001.1| succinyl-CoA synthetase subunit beta [Escherichia coli OP50]
 gi|298379747|ref|ZP_06989352.1| succinyl-CoA ligase subunit beta [Escherichia coli FVEC1302]
 gi|300816375|ref|ZP_07096597.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           107-1]
 gi|300822985|ref|ZP_07103120.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           119-7]
 gi|300900722|ref|ZP_07118871.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           198-1]
 gi|300906985|ref|ZP_07124654.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           84-1]
 gi|300926130|ref|ZP_07141943.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           182-1]
 gi|300929468|ref|ZP_07144936.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           187-1]
 gi|300947193|ref|ZP_07161403.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           116-1]
 gi|300957675|ref|ZP_07169864.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           175-1]
 gi|300972376|ref|ZP_07171913.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           200-1]
 gi|300993153|ref|ZP_07180236.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|301020812|ref|ZP_07184876.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           69-1]
 gi|301027092|ref|ZP_07190464.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           196-1]
 gi|301051353|ref|ZP_07198176.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|301305214|ref|ZP_07211312.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           124-1]
 gi|301327919|ref|ZP_07221090.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           78-1]
 gi|301648031|ref|ZP_07247798.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           146-1]
 gi|306812864|ref|ZP_07447057.1| succinyl-CoA synthetase subunit beta [Escherichia coli NC101]
 gi|307137339|ref|ZP_07496695.1| succinyl-CoA synthetase subunit beta [Escherichia coli H736]
 gi|307314808|ref|ZP_07594402.1| succinyl-CoA synthetase, beta subunit [Escherichia coli W]
 gi|309797440|ref|ZP_07691832.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           145-7]
 gi|331641228|ref|ZP_08342363.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H736]
 gi|331645876|ref|ZP_08346979.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M605]
 gi|331651725|ref|ZP_08352744.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M718]
 gi|331656745|ref|ZP_08357707.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA206]
 gi|331662080|ref|ZP_08363003.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA143]
 gi|331672242|ref|ZP_08373033.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA280]
 gi|331676409|ref|ZP_08377106.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H591]
 gi|331682158|ref|ZP_08382780.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H299]
 gi|332282425|ref|ZP_08394838.1| succinyl-CoA synthetase subunit beta [Shigella sp. D9]
 gi|67473117|sp|P0A836|SUCC_ECOLI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67473118|sp|P0A837|SUCC_ECOL6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67473119|sp|P0A838|SUCC_ECO57 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67473120|sp|P0A839|SUCC_SHIFL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123617726|sp|Q3Z476|SUCC_SHISS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189029907|sp|A7ZJA8|SUCC_ECO24 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030209|sp|A7ZXY8|SUCC_ECOHS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030212|sp|B1IY02|SUCC_ECOLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734945|sp|B5YQR7|SUCC_ECO5E RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734946|sp|B7NMS9|SUCC_ECO7I RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734948|sp|B1X6Q8|SUCC_ECODH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734949|sp|B7N9W6|SUCC_ECOLU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734950|sp|B6I7Z9|SUCC_ECOSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734951|sp|B1LLG1|SUCC_ECOSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778439|sp|B7LAD4|SUCC_ECO55 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|259511780|sp|C4ZWK2|SUCC_ECOBW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1065086|pdb|1SCU|B Chain B, The Crystal Structure Of Succinyl-Coa Synthetase From
           Escherichia Coli At 2.5 Angstroms Resolution
 gi|1065088|pdb|1SCU|E Chain E, The Crystal Structure Of Succinyl-Coa Synthetase From
           Escherichia Coli At 2.5 Angstroms Resolution
 gi|5822496|pdb|2SCU|B Chain B, A Detailed Description Of The Structure Of Succinyl-Coa
           Synthetase From Escherichia Coli
 gi|5822498|pdb|2SCU|E Chain E, A Detailed Description Of The Structure Of Succinyl-Coa
           Synthetase From Escherichia Coli
 gi|18655524|pdb|1JKJ|B Chain B, E. Coli Scs
 gi|18655526|pdb|1JKJ|E Chain E, E. Coli Scs
 gi|157835423|pdb|2NU6|B Chain B, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835425|pdb|2NU6|E Chain E, C123aa Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835427|pdb|2NU7|B Chain B, C123as Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835429|pdb|2NU7|E Chain E, C123as Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835431|pdb|2NU8|B Chain B, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835433|pdb|2NU8|E Chain E, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835435|pdb|2NU9|B Chain B, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835437|pdb|2NU9|E Chain E, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835439|pdb|2NU9|G Chain G, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835441|pdb|2NU9|I Chain I, C123at Mutant Of E. Coli Succinyl-Coa Synthetase
           Orthorhombic Crystal Form
 gi|157835443|pdb|2NUA|B Chain B, C123av Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|157835445|pdb|2NUA|E Chain E, C123av Mutant Of E. Coli Succinyl-Coa Synthetase
 gi|12513646|gb|AAG55052.1|AE005251_1 succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. EDL933]
 gi|26107094|gb|AAN79278.1|AE016757_182 Succinyl-CoA synthetase beta chain [Escherichia coli CFT073]
 gi|146203|gb|AAA23899.1| succinyl-CoA synthetase beta-subunit [Escherichia coli K-12]
 gi|1651323|dbj|BAA35394.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K12
           substr. W3110]
 gi|1786948|gb|AAC73822.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. MG1655]
 gi|13360212|dbj|BAB34176.1| succinyl-CoA synthetase beta subunit [Escherichia coli O157:H7 str.
           Sakai]
 gi|24050810|gb|AAN42213.1| succinyl-CoA synthetase, beta subunit [Shigella flexneri 2a str.
           301]
 gi|30040354|gb|AAP16086.1| succinyl-CoA synthetase, beta subunit [Shigella flexneri 2a str.
           2457T]
 gi|73854729|gb|AAZ87436.1| succinyl-CoA synthetase, beta subunit [Shigella sonnei Ss046]
 gi|91071335|gb|ABE06216.1| succinyl-CoA synthetase, beta subunit [Escherichia coli UTI89]
 gi|110342528|gb|ABG68765.1| succinyl-CoA synthetase beta chain [Escherichia coli 536]
 gi|115512045|gb|ABJ00120.1| succinyl-CoA synthetase, beta subunit [Escherichia coli APEC O1]
 gi|157065887|gb|ABV05142.1| succinate-CoA ligase, beta subunit [Escherichia coli HS]
 gi|157078674|gb|ABV18382.1| succinate-CoA ligase, beta subunit [Escherichia coli E24377A]
 gi|169755856|gb|ACA78555.1| succinyl-CoA synthetase, beta subunit [Escherichia coli ATCC 8739]
 gi|169888229|gb|ACB01936.1| succinyl-CoA synthetase, beta subunit [Escherichia coli str. K-12
           substr. DH10B]
 gi|170521232|gb|ACB19410.1| succinate-CoA ligase, beta subunit [Escherichia coli SMS-3-5]
 gi|187767243|gb|EDU31087.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015215|gb|EDU53337.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488432|gb|EDU63535.1| succinyl-CoA synthetase, beta chain [Escherichia coli 53638]
 gi|189002749|gb|EDU71735.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189355781|gb|EDU74200.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363437|gb|EDU81856.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365910|gb|EDU84326.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373189|gb|EDU91605.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|189376458|gb|EDU94874.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|190902770|gb|EDV62500.1| succinate-CoA ligase, beta subunit [Escherichia coli B7A]
 gi|190905666|gb|EDV65289.1| succinate-CoA ligase, beta subunit [Escherichia coli F11]
 gi|192926810|gb|EDV81436.1| succinate-CoA ligase, beta subunit [Escherichia coli E22]
 gi|194412884|gb|EDX29175.1| succinate-CoA ligase, beta subunit [Escherichia coli B171]
 gi|194417760|gb|EDX33858.1| succinate-CoA ligase, beta subunit [Shigella dysenteriae 1012]
 gi|194421808|gb|EDX37815.1| succinate-CoA ligase, beta subunit [Escherichia coli 101-1]
 gi|208731852|gb|EDZ80540.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737181|gb|EDZ84865.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158831|gb|ACI36264.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209776468|gb|ACI86546.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209776470|gb|ACI86547.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209776472|gb|ACI86548.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209776476|gb|ACI86550.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
 gi|209911237|dbj|BAG76311.1| succinyl-CoA synthase beta subunit [Escherichia coli SE11]
 gi|217321009|gb|EEC29433.1| succinate-CoA ligase, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218350883|emb|CAU96581.1| succinyl-CoA synthetase, beta subunit [Escherichia coli 55989]
 gi|218357249|emb|CAQ89884.1| succinyl-CoA synthetase, beta subunit [Escherichia fergusonii ATCC
           35469]
 gi|218364412|emb|CAR02092.1| succinyl-CoA synthetase, beta subunit [Escherichia coli S88]
 gi|218369068|emb|CAR16822.1| succinyl-CoA synthetase, beta subunit [Escherichia coli IAI39]
 gi|218426085|emb|CAR06903.1| succinyl-CoA synthetase, beta subunit [Escherichia coli ED1a]
 gi|218431141|emb|CAR12017.1| succinyl-CoA synthetase, beta subunit [Escherichia coli UMN026]
 gi|222032464|emb|CAP75203.1| Succinyl-CoA synthetase beta chain [Escherichia coli LF82]
 gi|226898520|gb|EEH84779.1| succinyl-CoA synthetase subunit beta [Escherichia sp. 3_2_53FAA]
 gi|227838727|gb|EEJ49193.1| succinyl-CoA synthetase subunit beta [Escherichia coli 83972]
 gi|238863592|gb|ACR65590.1| succinyl-CoA synthetase, beta subunit [Escherichia coli BW2952]
 gi|242376489|emb|CAQ31193.1| succinyl-CoA synthetase, beta subunit, subunit of succinyl-CoA
           synthetase [Escherichia coli BL21(DE3)]
 gi|253325346|gb|ACT29948.1| succinyl-CoA synthetase, beta subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972698|gb|ACT38369.1| succinyl-CoA synthetase subunit beta [Escherichia coli B str.
           REL606]
 gi|253976892|gb|ACT42562.1| succinyl-CoA synthetase subunit beta [Escherichia coli BL21(DE3)]
 gi|254591274|gb|ACT70635.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O157:H7
           str. TW14359]
 gi|257752611|dbj|BAI24113.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O26:H11
           str. 11368]
 gi|257758081|dbj|BAI29578.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O103:H2
           str. 12009]
 gi|260450119|gb|ACX40541.1| succinyl-CoA synthetase, beta subunit [Escherichia coli DH1]
 gi|281177870|dbj|BAI54200.1| succinyl-CoA synthetase beta subunit [Escherichia coli SE15]
 gi|281599957|gb|ADA72941.1| Succinyl-CoA synthetase beta chain [Shigella flexneri 2002017]
 gi|284920506|emb|CBG33568.1| succinyl-CoA synthetase beta chain [Escherichia coli 042]
 gi|290761533|gb|ADD55494.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323815|gb|EFE63237.1| succinyl-CoA ligase subunit beta [Escherichia coli B088]
 gi|291428557|gb|EFF01582.1| sucC [Escherichia coli FVEC1412]
 gi|291434063|gb|EFF07036.1| succinyl-CoA ligase subunit beta [Escherichia coli B185]
 gi|291469569|gb|EFF12053.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294489791|gb|ADE88547.1| succinate-CoA ligase, beta subunit [Escherichia coli IHE3034]
 gi|298279445|gb|EFI20953.1| succinyl-CoA ligase subunit beta [Escherichia coli FVEC1302]
 gi|299879426|gb|EFI87637.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           196-1]
 gi|300297015|gb|EFJ53400.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|300309175|gb|EFJ63695.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           200-1]
 gi|300315593|gb|EFJ65377.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           175-1]
 gi|300355781|gb|EFJ71651.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           198-1]
 gi|300398458|gb|EFJ81996.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           69-1]
 gi|300401206|gb|EFJ84744.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           84-1]
 gi|300406683|gb|EFJ90221.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|300417829|gb|EFK01140.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           182-1]
 gi|300453179|gb|EFK16799.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           116-1]
 gi|300462577|gb|EFK26070.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           187-1]
 gi|300524526|gb|EFK45595.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           119-7]
 gi|300531065|gb|EFK52127.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           107-1]
 gi|300839526|gb|EFK67286.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           124-1]
 gi|300845562|gb|EFK73322.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           78-1]
 gi|301073857|gb|EFK88663.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           146-1]
 gi|305853627|gb|EFM54066.1| succinyl-CoA synthetase subunit beta [Escherichia coli NC101]
 gi|306905706|gb|EFN36234.1| succinyl-CoA synthetase, beta subunit [Escherichia coli W]
 gi|307552579|gb|ADN45354.1| succinyl-CoA synthetase beta chain with ATP-grasp domain
           [Escherichia coli ABU 83972]
 gi|307627858|gb|ADN72162.1| succinyl-CoA synthetase subunit beta [Escherichia coli UM146]
 gi|308118964|gb|EFO56226.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           145-7]
 gi|309700949|emb|CBJ00246.1| succinyl-CoA synthetase beta chain [Escherichia coli ETEC H10407]
 gi|312945252|gb|ADR26079.1| succinyl-CoA synthetase subunit beta [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|313649631|gb|EFS14055.1| succinyl-CoA synthetase beta chain [Shigella flexneri 2a str.
           2457T]
 gi|315059970|gb|ADT74297.1| succinyl-CoA synthetase, beta subunit [Escherichia coli W]
 gi|315135383|dbj|BAJ42542.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           DH1]
 gi|315257645|gb|EFU37613.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           85-1]
 gi|315287158|gb|EFU46570.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           110-3]
 gi|315292641|gb|EFU51993.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           153-1]
 gi|315299270|gb|EFU58522.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           16-3]
 gi|315614602|gb|EFU95244.1| succinyl-CoA synthetase beta chain [Escherichia coli 3431]
 gi|320179432|gb|EFW54389.1| Succinyl-CoA ligase [ADP-forming] beta chain [Shigella boydii ATCC
           9905]
 gi|320193122|gb|EFW67762.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           O157:H7 str. EC1212]
 gi|320194115|gb|EFW68747.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           WV_060327]
 gi|320198154|gb|EFW72758.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           EC4100B]
 gi|320637975|gb|EFX07744.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           G5101]
 gi|320643370|gb|EFX12550.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H- str.
           493-89]
 gi|320648719|gb|EFX17352.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H- str.
           H 2687]
 gi|320654303|gb|EFX22356.1| succinyl-CoA synthetase subunit beta [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320664760|gb|EFX31898.1| succinyl-CoA synthetase subunit beta [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153759|gb|EFZ40006.1| succinyl-CoA synthetase beta chain [Escherichia coli EPECa14]
 gi|323158777|gb|EFZ44790.1| succinyl-CoA synthetase beta chain [Escherichia coli E128010]
 gi|323163886|gb|EFZ49696.1| succinyl-CoA synthetase beta chain [Shigella sonnei 53G]
 gi|323170847|gb|EFZ56497.1| succinyl-CoA synthetase beta chain [Escherichia coli LT-68]
 gi|323185114|gb|EFZ70480.1| succinyl-CoA synthetase beta chain [Escherichia coli 1357]
 gi|323379470|gb|ADX51738.1| succinyl-CoA synthetase, beta subunit [Escherichia coli KO11]
 gi|323938305|gb|EGB34562.1| succinate-CoA ligase [Escherichia coli E1520]
 gi|323942949|gb|EGB39113.1| succinate-CoA ligase [Escherichia coli E482]
 gi|323947008|gb|EGB43022.1| succinate-CoA ligase [Escherichia coli H120]
 gi|323952714|gb|EGB48582.1| succinate-CoA ligase [Escherichia coli H252]
 gi|323958472|gb|EGB54178.1| succinate-CoA ligase [Escherichia coli H263]
 gi|323963108|gb|EGB58678.1| succinate-CoA ligase [Escherichia coli H489]
 gi|323967434|gb|EGB62854.1| succinate-CoA ligase [Escherichia coli M863]
 gi|323972012|gb|EGB67232.1| succinate-CoA ligase [Escherichia coli TA007]
 gi|323976302|gb|EGB71392.1| succinate-CoA ligase [Escherichia coli TW10509]
 gi|324009579|gb|EGB78798.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           57-2]
 gi|324010449|gb|EGB79668.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           60-1]
 gi|324020366|gb|EGB89585.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           117-3]
 gi|324114837|gb|EGC08805.1| succinate-CoA ligase [Escherichia fergusonii B253]
 gi|324116268|gb|EGC10189.1| succinate-CoA ligase [Escherichia coli E1167]
 gi|325498098|gb|EGC95957.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia
           fergusonii ECD227]
 gi|326341534|gb|EGD65324.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           O157:H7 str. 1044]
 gi|326345752|gb|EGD69491.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           O157:H7 str. 1125]
 gi|327254406|gb|EGE66028.1| succinyl-CoA synthetase beta chain [Escherichia coli STEC_7v]
 gi|330910476|gb|EGH38986.1| succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           AA86]
 gi|331038026|gb|EGI10246.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H736]
 gi|331044628|gb|EGI16755.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M605]
 gi|331050003|gb|EGI22061.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           M718]
 gi|331054993|gb|EGI27002.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA206]
 gi|331060502|gb|EGI32466.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA143]
 gi|331070437|gb|EGI41801.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA280]
 gi|331075902|gb|EGI47199.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H591]
 gi|331080582|gb|EGI51758.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           H299]
 gi|332093788|gb|EGI98842.1| succinyl-CoA synthetase beta chain [Shigella boydii 5216-82]
 gi|332096513|gb|EGJ01509.1| succinyl-CoA synthetase beta chain [Shigella dysenteriae 155-74]
 gi|332104777|gb|EGJ08123.1| succinyl-CoA synthetase subunit beta [Shigella sp. D9]
 gi|332760907|gb|EGJ91195.1| succinyl-CoA synthetase beta chain [Shigella flexneri 4343-70]
 gi|332761279|gb|EGJ91565.1| succinyl-CoA synthetase beta chain [Shigella flexneri 2747-71]
 gi|332763954|gb|EGJ94192.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-671]
 gi|332768175|gb|EGJ98360.1| succinyl-CoA synthetase, &beta subunit [Shigella flexneri 2930-71]
 gi|333007363|gb|EGK26843.1| succinyl-CoA synthetase beta chain [Shigella flexneri VA-6]
 gi|333007779|gb|EGK27255.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-218]
 gi|333021484|gb|EGK40734.1| succinyl-CoA synthetase beta chain [Shigella flexneri K-304]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|78186385|ref|YP_374428.1| succinyl-CoA synthetase, beta subunit [Chlorobium luteolum DSM 273]
 gi|123583394|sp|Q3B5J6|SUCC_PELLD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78166287|gb|ABB23385.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           luteolum DSM 273]
          Length = 391

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/399 (48%), Positives = 262/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A+ A + L      P+ V+K+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAYSAEEAKQAAEQLFAEQDSPVVVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +       ++LG+TL+T QTGP G  V  + VE+G +I R
Sbjct: 61  A----------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRLLVEEGMNIDR 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE+VA++ P+ + K+ +D   G+           
Sbjct: 111 EFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +       LY A+   D +L EINPL++ K GR+  LD+KI+FD NALYRH
Sbjct: 171 LGLEGEQFRNAVSFITALYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KDFIELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A +++ +N+P++
Sbjct: 291 LDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAARKIGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N DI  +++ ESGLN+I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNADIAQKMLDESGLNLIAADGLKDAAQKVNQAL 389


>gi|311266259|ref|XP_003131022.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Sus scrofa]
          Length = 463

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 447


>gi|238765254|ref|ZP_04626183.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238696526|gb|EEP89314.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|215485746|ref|YP_002328177.1| succinyl-CoA synthetase subunit beta [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965158|ref|ZP_07779395.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
 gi|215263818|emb|CAS08155.1| succinyl-CoA synthetase, beta subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312290249|gb|EFR18132.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
 gi|323191072|gb|EFZ76337.1| succinyl-CoA synthetase beta chain [Escherichia coli RN587/1]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLVCLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|296135285|ref|YP_003642527.1| succinyl-CoA synthetase, beta subunit [Thiomonas intermedia K12]
 gi|295795407|gb|ADG30197.1| succinyl-CoA synthetase, beta subunit [Thiomonas intermedia K12]
          Length = 401

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 187/384 (48%), Positives = 267/384 (69%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR++ VPV +G    SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQAKQLLREHGVPVPRGKPAFSVDEAIAAAQELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G +V  + +E+GADIL+E Y+
Sbjct: 52  -GGRGKGGGVKLARTLDEVRQLSLQILGMQLVTHQTGPAGQKVRRLLIEEGADILKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+       L   + + 
Sbjct: 111 AVLTDRATQKVAVMASSEGGMDIEEVAAKTPEKILKVFVDPLVGLQEAQGLELAAGIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             ++    D+F  LY+ + D D SL+EINPLI+  NG ++ LD+K + DDNAL+RH +I+
Sbjct: 171 LASQAQAIDVFKKLYQCYMDTDASLVEINPLILEGNGGIKALDAKFNIDDNALFRHPEIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EED  E++A + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG+PANFLDVG
Sbjct: 231 AMRDLDEEDPAEVQAHKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCD + +G+++A + V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLHNPHVKAILVNIFGGIMRCDTIAEGVIAASRTVGLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N +IG +++A+SGL +I+A  +
Sbjct: 351 GTNEEIGRKMLADSGLPIISANTM 374


>gi|298505174|gb|ADI83897.1| succinyl-CoA synthetase, beta subunit [Geobacter sulfurreducens
           KN400]
          Length = 385

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 191/392 (48%), Positives = 259/392 (66%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y +PV +G V  +    E A K + G   V+K+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSAYGIPVPRGRVALTSDQVERAAKEMGG-RCVIKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  LIT QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDYGKELFGRRLITPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     IAS +GG+DIEEVA+  P KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRSTSRYCLIASAEGGVDIEEVAQKSPDKIHVLTIDPYTGLRPFQARRIALALGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLYK   +KD SL+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GTLCEDCVELMLNLYKVVLEKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D+ VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILEDADVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+ V  G +L+ ESGLNV TA  L + A++IV
Sbjct: 350 GSKVAEGKQLLVESGLNVQTADSLGEGAERIV 381


>gi|227114765|ref|ZP_03828421.1| succinyl-CoA synthetase subunit beta [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L  AAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAVEG 387


>gi|119356458|ref|YP_911102.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           phaeobacteroides DSM 266]
 gi|189046908|sp|A1BE51|SUCC_CHLPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119353807|gb|ABL64678.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 392

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 191/400 (47%), Positives = 267/400 (66%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A+ A   L      P+ V+K+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAFSPEEAKQAAIQLFEEQNSPVVVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S + V    +++LG TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAKSPEEVFDIAQQMLGITLVTHQTGPEGKEVRRLLVEEGMNIDK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P+K+ K+ ++PL G+ +         
Sbjct: 111 EFYVGITLDRSTSQNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPLFGLQAFQARQAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           LEL+G+   +       LY A+   D ++ EINPL++ K GR+  LD+KI+FD NAL+RH
Sbjct: 171 LELEGEQFKNTVKFITALYNAYTSIDAAIAEINPLVVTKEGRVLALDAKINFDSNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGRPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A K+V +++P++
Sbjct: 291 LDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKVDLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG N  I  +++ ESGLN+I A  L DAA+K+  A++
Sbjct: 351 VRLEGTNASIAQKMLDESGLNLIAAKGLHDAAKKVHEALE 390


>gi|330829377|ref|YP_004392329.1| succinyl-CoA ligase [ADP-forming] subunit beta [Aeromonas veronii
           B565]
 gi|328804513|gb|AEB49712.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Aeromonas veronii
           B565]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 258/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G   ++   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGYACATPQEAAEAADKIGGNTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +  +  LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE++A + P  I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVDIEKIAHETPHLIHKAAIDPLVGPQAYQARELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F D D +LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDPREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDNNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G   +AESGLN+I A  L DAAQ++V A +
Sbjct: 351 GNNAELGGIKLAESGLNIIAAKSLTDAAQQVVKAAE 386


>gi|16759677|ref|NP_455294.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764108|ref|NP_459723.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142550|ref|NP_805892.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414145|ref|YP_151220.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179312|ref|YP_215729.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161615036|ref|YP_001589000.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552843|ref|ZP_02346594.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167993015|ref|ZP_02574110.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230617|ref|ZP_02655675.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168238882|ref|ZP_02663940.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168240590|ref|ZP_02665522.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264342|ref|ZP_02686315.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467705|ref|ZP_02701542.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820133|ref|ZP_02832133.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194445717|ref|YP_002039975.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448880|ref|YP_002044768.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472361|ref|ZP_03078345.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736247|ref|YP_002113844.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197249811|ref|YP_002145696.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197261736|ref|ZP_03161810.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197363067|ref|YP_002142704.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200389638|ref|ZP_03216249.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204929880|ref|ZP_03220901.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205352002|ref|YP_002225803.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856182|ref|YP_002242833.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213027470|ref|ZP_03341917.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213051755|ref|ZP_03344633.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425386|ref|ZP_03358136.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213649149|ref|ZP_03379202.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213851940|ref|ZP_03381472.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224582553|ref|YP_002636351.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911668|ref|ZP_04655505.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289824375|ref|ZP_06543968.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|54039644|sp|P66870|SUCC_SALTI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54042232|sp|P66869|SUCC_SALTY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|75484387|sp|Q57RL3|SUCC_SALCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77417483|sp|Q5PCM7|SUCC_SALPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081795|sp|A9MTQ2|SUCC_SALPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734981|sp|B5EZG1|SUCC_SALA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734983|sp|B5QWG8|SUCC_SALEP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734984|sp|B5R689|SUCC_SALG2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734985|sp|B4TBD7|SUCC_SALHS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734986|sp|B4SZE2|SUCC_SALNS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734987|sp|B5BC72|SUCC_SALPK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734988|sp|B4TQ53|SUCC_SALSV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778450|sp|C0PWE7|SUCC_SALPC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|25293469|pir||AF0591 succinyl-CoA synthetase beta chain [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16419248|gb|AAL19682.1| succinyl-CoA synthetase, beta subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501970|emb|CAD05200.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138181|gb|AAO69752.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128402|gb|AAV77908.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62126945|gb|AAX64648.1| succinyl-CoA synthetase, beta subunit [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364400|gb|ABX68168.1| hypothetical protein SPAB_02796 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404380|gb|ACF64602.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407184|gb|ACF67403.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458725|gb|EDX47564.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711749|gb|ACF90970.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195629215|gb|EDX48583.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094544|emb|CAR60064.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197213514|gb|ACH50911.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197239991|gb|EDY22611.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197288325|gb|EDY27706.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199602083|gb|EDZ00629.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320874|gb|EDZ06075.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205271783|emb|CAR36617.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205322561|gb|EDZ10400.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328889|gb|EDZ15653.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334709|gb|EDZ21473.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205339991|gb|EDZ26755.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343101|gb|EDZ29865.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347162|gb|EDZ33793.1| succinate-CoA ligase, beta subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707985|emb|CAR32274.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467080|gb|ACN44910.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246001|emb|CBG23803.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992476|gb|ACY87361.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312911764|dbj|BAJ35738.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085007|emb|CBY94796.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226313|gb|EFX51364.1| Succinyl-CoA ligase [ADP-forming] beta chain [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322615829|gb|EFY12747.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621225|gb|EFY18082.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623645|gb|EFY20483.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628917|gb|EFY25697.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634897|gb|EFY31627.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636575|gb|EFY33279.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641759|gb|EFY38393.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647816|gb|EFY44296.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651854|gb|EFY48223.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322652649|gb|EFY48998.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658457|gb|EFY54720.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664941|gb|EFY61132.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668390|gb|EFY64546.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670522|gb|EFY66655.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675262|gb|EFY71338.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679688|gb|EFY75729.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684836|gb|EFY80835.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322713781|gb|EFZ05352.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323193154|gb|EFZ78373.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200605|gb|EFZ85680.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202277|gb|EFZ87325.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205456|gb|EFZ90422.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213505|gb|EFZ98298.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215339|gb|EGA00084.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221786|gb|EGA06193.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323228084|gb|EGA12220.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231010|gb|EGA15126.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234157|gb|EGA18246.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238148|gb|EGA22206.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243583|gb|EGA27601.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247393|gb|EGA31352.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251381|gb|EGA35253.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258480|gb|EGA42152.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260634|gb|EGA44243.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264706|gb|EGA48208.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270970|gb|EGA54405.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326627042|gb|EGE33385.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332987675|gb|AEF06658.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 388

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|157369512|ref|YP_001477501.1| succinyl-CoA synthetase subunit beta [Serratia proteamaculans 568]
 gi|189081797|sp|A8GB83|SUCC_SERP5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157321276|gb|ABV40373.1| succinyl-CoA synthetase, beta subunit [Serratia proteamaculans 568]
          Length = 388

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/395 (48%), Positives = 262/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K+ IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL++ K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVGQFAKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDLSQEDERESRAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|194333450|ref|YP_002015310.1| succinyl-CoA synthetase subunit beta [Prosthecochloris aestuarii
           DSM 271]
 gi|226734972|sp|B4S612|SUCC_PROA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|194311268|gb|ACF45663.1| succinyl-CoA synthetase, beta subunit [Prosthecochloris aestuarii
           DSM 271]
          Length = 390

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/399 (48%), Positives = 262/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  +   A  A + L      P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVSVPKGIVAFTAEEARQAAEQLFEEQENPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S   V    R+++G TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAKSPDEVFDIARQMIGCTLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE VA++ P+K+ K+ I PL G+           
Sbjct: 111 EFYVGITLDRATSQNVLMVSTEGGMEIETVAEETPEKLLKIQIHPLQGLQGFQARQAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G    +       LYKA+   D S+ EINPL+I K G++  LD+KI+FD NAL+RH
Sbjct: 171 LGLEGDKFKNTVKFITALYKAYTAIDASIAEINPLVITKEGKVMALDAKINFDSNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V   FKII SD +VK ILINIFGGI+RCD +  G++ A K+V +++P++
Sbjct: 291 LDVGGSASPETVEEGFKIIMSDKNVKAILINIFGGIVRCDRVAGGVIEAAKKVGLDMPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N +I  +++ ESGLN+I A  L +AAQK+  A+
Sbjct: 351 VRLEGTNAEIAQKMLDESGLNLIAANGLREAAQKVNEAL 389


>gi|161504112|ref|YP_001571224.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189081794|sp|A9MJL9|SUCC_SALAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|160865459|gb|ABX22082.1| hypothetical protein SARI_02210 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 388

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|254459615|ref|ZP_05073031.1| succinyl-CoA synthetase beta subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206676204|gb|EDZ40691.1| succinyl-CoA synthetase beta subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 396

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 171/397 (43%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVEIPAGALAYSPEQAAYRAREMGGEKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +   ++ G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCDTDHEIQATCEDMFGKKLVTHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  +  +AS +GGM+IEE++++ P+ I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRTTQRIMIVASAEGGMEIEEISENKPESIVRSTVEPAVGLRDFQARDIAFKLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PSLTQSMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+GNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLEGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ +L+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPIIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +++A+SGL +I A  L +AA++ V A K 
Sbjct: 351 GTNVEEGQKILAKSGLPIIRATTLMEAAERSVSAWKS 387


>gi|328875554|gb|EGG23918.1| succinate-CoA ligase [Dictyostelium fasciculatum]
          Length = 418

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 193/395 (48%), Positives = 263/395 (66%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEYQ+K+L+ +Y V   K  VIS    A  A   L     V+K+Q+HAGGRGKG FK
Sbjct: 24  LDLHEYQSKSLMDQYGVNTQKWRVISKADEAPKAASELNAKELVIKAQVHAGGRGKGTFK 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV++ ++ K        +LG  L+TKQT   G+ V  V + +  D  RELY 
Sbjct: 84  E--TGYKGGVKLCTTGKEAQELSGHMLGKHLVTKQTTADGTLVQKVMIAESVDPARELYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR SG    +AS +GG+DIE VA++ P+ I+K ++D   GV  E    L + L  +
Sbjct: 142 AILMDRASGGPVMVASPKGGVDIEAVAEETPELIYKEVVDITKGVQPEQTRRLAEKLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       +   NLYK F   D + +E+NP     +G++  +D+KI+FDDNA +R  DI 
Sbjct: 202 GDKLKIAQEQMENLYKLFIKSDATQVEVNPFAETTDGKIYAMDAKINFDDNASFRQKDIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD++EED RE+EA QH L+YI +DGNIGCMVNGAGLAMATMDIIKL+ G PANFLDVG
Sbjct: 262 DMRDIAEEDPREVEASQHGLNYIGMDGNIGCMVNGAGLAMATMDIIKLHKGTPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA + +V  AFKI+T D  VK IL+NIFGGIM+CDV+  G++ A K+V + IPLV+RL 
Sbjct: 322 GGATEKQVTEAFKILTKDKQVKAILVNIFGGIMKCDVIAAGVVGACKQVGLKIPLVVRLA 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG  ++ +SG N+ITA DLDDAA K V ++
Sbjct: 382 GTNVEIGKDILEKSGFNIITANDLDDAAIKAVASI 416


>gi|110804645|ref|YP_688165.1| succinyl-CoA synthetase subunit beta [Shigella flexneri 5 str.
           8401]
 gi|123048359|sp|Q0T6W6|SUCC_SHIF8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110614193|gb|ABF02860.1| succinyl-CoA synthetase, beta subunit [Shigella flexneri 5 str.
           8401]
          Length = 388

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED R  +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPRAAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|313682585|ref|YP_004060323.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155445|gb|ADR34123.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfuricurvum
           kujiense DSM 16994]
          Length = 389

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/398 (47%), Positives = 249/398 (62%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L +KYNVP  +G +  +   A  A + L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKELFKKYNVPTPRGHIAFTPDEAVKAAQELGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V     +ILG  L+T QTGP G  V  VY+E+GADI +E YL
Sbjct: 52  -GGRGLGGGVKLARSTSEVRELASQILGMQLVTHQTGPEGKLVQKVYIEEGADIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR S M   +AST+GGM IE+VA D P+KI K+ IDPL G  S     L   L L 
Sbjct: 111 GMLLDRASEMPIMMASTEGGMAIEDVAHDSPEKIIKVAIDPLTGFQSFHGRKLAFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+ + D D  ++EINPLI   +G+   LD+K+ FD+NALYR   + 
Sbjct: 171 VEEINTFIKFASALYRVYMDHDAEMIEINPLIKTGDGKFLALDAKMGFDNNALYRQSQVN 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+SEE+  EIEA +  LSYI LDG++GCMVNGAGLAM TMD I   GG PANFLDVG
Sbjct: 231 EMRDLSEEEPTEIEAGKFGLSYIKLDGDVGCMVNGAGLAMGTMDTINYEGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K  K+++P+++RL+
Sbjct: 291 GGANAETVAKGFEIILKDPNVKAIFVNIFGGIVRCDRVANGILEATKLTKVDVPVIVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      ++  +G+ N+I A DL D A+K V A KG
Sbjct: 351 GTNAIEAAEILNNAGISNIIAATDLADGARKAVAAAKG 388


>gi|91785106|ref|YP_560312.1| succinyl-CoA synthetase subunit beta [Burkholderia xenovorans
           LB400]
 gi|123168102|sp|Q13UH9|SUCC_BURXL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91689060|gb|ABE32260.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           xenovorans LB400]
          Length = 389

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I A  +++AAQK+V A  G
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADSMEEAAQKVVAAASG 387


>gi|42521007|ref|NP_966922.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|81652161|sp|Q73FW3|SUCC_WOLPM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|42410748|gb|AAS14856.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 383

 Score =  471 bits (1212), Expect = e-131,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 272/396 (68%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  K+NVPV KG V +S    ++ +  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEVFHKFNVPVPKGFVATSAEEVKTQVSQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++     +++++G TL+T QTGP+G +V  VYVE+G+ I +E YL
Sbjct: 58  -------GGVKLAKSVEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++D       FI S++GGMDIEEVAK+ P KI K  IDP    TS D + L     L 
Sbjct: 111 SLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDIDPA---TSFDSSKLSSRFHLS 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   +Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 168 PEQIEKISNIAKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNALYRHPEIM 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ LSYI +DG+IGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 228 ELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 288 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +LD+AAQKIV  VK
Sbjct: 348 GTNFEEGKKILEESGLNIIAADELDEAAQKIVKEVK 383


>gi|238797739|ref|ZP_04641233.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia mollaretii
           ATCC 43969]
 gi|238718380|gb|EEQ10202.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia mollaretii
           ATCC 43969]
          Length = 388

 Score =  471 bits (1212), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACSTPREAEEAASKIGTGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|39996160|ref|NP_952111.1| succinyl-CoA synthetase subunit beta [Geobacter sulfurreducens PCA]
 gi|81702853|sp|Q74EA5|SUCC_GEOSL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|39982925|gb|AAR34384.1| succinyl-CoA synthase, beta subunit [Geobacter sulfurreducens PCA]
          Length = 385

 Score =  471 bits (1212), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/392 (48%), Positives = 258/392 (65%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y +PV +G V  +    E A K + G   V+K+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSAYGIPVPRGRVALTSDQVERAAKEMGG-RCVIKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  LIT QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDYGKELFGRRLITPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     IAS +GG+DIEEV +  P KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRSTSRYCLIASAEGGVDIEEVVQKSPDKIHVLTIDPYTGLRPFQARRIALALGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLYK   +KD SL+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GTLCEDCVELMLNLYKVVLEKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAIFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D+ VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILEDADVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G+ V  G +L+ ESGLNV TA  L + A++IV
Sbjct: 350 GSKVAEGKQLLVESGLNVQTADSLGEGAERIV 381


>gi|110678492|ref|YP_681499.1| malate--CoA ligase subunit beta [Roseobacter denitrificans OCh 114]
 gi|109454608|gb|ABG30813.1| malate-CoA ligase, beta subunit, putative [Roseobacter
           denitrificans OCh 114]
          Length = 399

 Score =  471 bits (1212), Expect = e-131,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MDIHEYQAKEVLANFGVAVPDGALAYSPEQASYRARELGGERWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   +     E+ G  +IT QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCESDVEIQKASEEMFGKKMITHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  V  +AS +GGM+IEE+++  P+ I + +++P +G+       +   L + 
Sbjct: 111 GFVLDRTTQRVMIVASAEGGMEIEEISEKRPESIVRAIVEPAVGLREFQCRQIAFKLGVD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 AGLTQQMVRTLQGCYRAFTELDATMVEINPLVITADNRVIALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD SV+ IL+NIF GI RCD + +G++ A++EV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQALREVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAQSGLPIIRATTLMEAAERAVGAWQ 386


>gi|326794798|ref|YP_004312618.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinomonas
           mediterranea MMB-1]
 gi|326545562|gb|ADZ90782.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinomonas
           mediterranea MMB-1]
          Length = 388

 Score =  471 bits (1212), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV+KG  + +   A  A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFADYGLPVSKGYAVDTPEEAVEAAKKIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVDSHEEVSAFAANWLGKNLVTYQTDENGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL+G        +   + L 
Sbjct: 111 GAVVDRSTRKVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGAQPYQAREMAFKMGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L + F D D +LLEINPL+I   G L  LD KI+ D NA+YR   +Q
Sbjct: 171 PEQTKQFTKIFLGLSQMFHDFDFALLEINPLVITDEGNLHCLDGKINIDSNAVYRQKKMQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AV++V + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNAEKGREVLANSDLDIIAATSLKDAAEQVVKAAEG 387


>gi|325109408|ref|YP_004270476.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Planctomyces
           brasiliensis DSM 5305]
 gi|324969676|gb|ADY60454.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 395

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 271/397 (68%), Gaps = 2/397 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L R+  VPV +G+V  S+     A + L G L VVKSQIHAGGRGKG FK
Sbjct: 1   MKIHEYQAKQLFREAGVPVPRGIVAHSLDDVTQAFQQLGGALAVVKSQIHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   + GV +  S      +   ++G+TL+T QTG  G +VN ++VE+G +I RELYL
Sbjct: 61  EQP--EQRGVVLVKSAGEAHENAGRMMGNTLVTIQTGEEGKQVNTLFVEEGLEIARELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S     I ST+GGM+IEEVA+  P+KI +   D  +G+       +   L ++
Sbjct: 119 GIVIDRESSCPVLIMSTEGGMEIEEVAEHSPEKIIREYFDVALGLLPYQARKMAFALGME 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           + + F D D S+ EINPLI+  +G L  LD+K++FDDNAL+RH +++
Sbjct: 179 GKTVRSAEKFLTKVCQFFIDNDCSMTEINPLIVTGDGELVALDAKVTFDDNALFRHKNLE 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+SEE+  E++A+   LSY+ LDGNIGC+VNGAGLAM+TMD+IKL+GG PANFLDVG
Sbjct: 239 PFRDLSEEEPAEVKAQDAGLSYVKLDGNIGCLVNGAGLAMSTMDLIKLHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  AF+II +D +VK +L+NIFGGIM+CDV+V+ +L+A  +V  ++PLV+RLE
Sbjct: 299 GGATVDAVTEAFRIILADENVKAVLVNIFGGIMKCDVIVEALLTAYDKVGFHVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+    ++A SG ++ITA +L DAA+K+V  ++G
Sbjct: 359 GTNVEKAREMLAASGKDIITAENLTDAAKKVVGTLQG 395


>gi|283784483|ref|YP_003364348.1| succinyl-CoA synthetase beta chain [Citrobacter rodentium ICC168]
 gi|282947937|emb|CBG87501.1| succinyl-CoA synthetase beta chain [Citrobacter rodentium ICC168]
          Length = 388

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|126668314|ref|ZP_01739273.1| succinyl-CoA synthetase subunit beta [Marinobacter sp. ELB17]
 gi|126627231|gb|EAZ97869.1| succinyl-CoA synthetase subunit beta [Marinobacter sp. ELB17]
          Length = 388

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++G+  S+   A +A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSQGIACSTPDEAVAAAEKIGGDSWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKNTDDIRAFAEQWLGKKLVTFQTDEHGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLEINPL+I   G L  LD+KI  D NALYR   +Q
Sbjct: 171 GKQIGQFTKIFMGLAKLFEDYDLALLEINPLVITPAGDLHCLDAKIGVDGNALYRQKRLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+EDSRE EA    L+Y+ALDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 AMRDPSQEDSREAEAAAWELNYVALDGNIGCMVNGAGLAMGTMDIIKLAGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++++AESGLN+I A  L DAA+++V    G
Sbjct: 351 GNNAELGSKVLAESGLNIIAASSLADAAEQVVKVAGG 387


>gi|329847465|ref|ZP_08262493.1| succinyl-CoA ligase ADP-forming subunit beta [Asticcacaulis
           biprosthecum C19]
 gi|328842528|gb|EGF92097.1| succinyl-CoA ligase ADP-forming subunit beta [Asticcacaulis
           biprosthecum C19]
          Length = 401

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 240/401 (59%), Positives = 297/401 (74%), Gaps = 4/401 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHE+QAKA+L+++ V V +G    S   A+ A +TL       ++VVKSQIHAGGRGK
Sbjct: 1   MNIHEHQAKAVLKEFGVAVPRGFPAYSPQEAKKAAETLAKEAGSKVFVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           GRF+ L  D+KGGVRV  +   V S+  E+LG  L+T QTGP G +VN +Y+E+GADI +
Sbjct: 61  GRFEGLGPDAKGGVRVVKTPDDVKSNADEMLGRVLVTIQTGPAGKQVNRLYIEEGADIAK 120

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYLSLLVDR S  V+ +AST+GGM IE+VA D P+KI    IDP  GV      +L   
Sbjct: 121 ELYLSLLVDRVSSKVSVVASTEGGMSIEDVAHDTPEKIHSFTIDPATGVWPTHARALAQA 180

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G     G  L   LY AF  KDM +LEINPLI+  + +L VLD+K SFD NAL+RH
Sbjct: 181 LNLKGDLAKQGAKLLSQLYAAFTAKDMDMLEINPLIVTGDDKLLVLDAKCSFDSNALFRH 240

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ ELRDV+EED +EIEA +++LSYIALDG IGCMVNGAGLAMAT+DIIKLYG  PANF
Sbjct: 241 PDMVELRDVTEEDEKEIEASKYDLSYIALDGEIGCMVNGAGLAMATLDIIKLYGSEPANF 300

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV AAFKIITSD  VKGIL+NIFGGIM+CD++ +G++ AVKEV + +PLV
Sbjct: 301 LDVGGGATTEKVTAAFKIITSDPKVKGILVNIFGGIMKCDIIAQGVIVAVKEVGLKVPLV 360

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +RLEG NV++G +++ ESGLNVI A DL DAA KIV AVKG
Sbjct: 361 VRLEGTNVELGKKILNESGLNVIAADDLADAAAKIVKAVKG 401


>gi|170769040|ref|ZP_02903493.1| succinate-CoA ligase, beta subunit [Escherichia albertii TW07627]
 gi|170122112|gb|EDS91043.1| succinate-CoA ligase, beta subunit [Escherichia albertii TW07627]
          Length = 388

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L     +PV  G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASSGLPVPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT  +G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDASGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|218553254|ref|YP_002386167.1| succinyl-CoA synthetase subunit beta [Escherichia coli IAI1]
 gi|226734947|sp|B7M5P1|SUCC_ECO8A RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218360022|emb|CAQ97569.1| succinyl-CoA synthetase, beta subunit [Escherichia coli IAI1]
          Length = 388

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAEVGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|238793888|ref|ZP_04637508.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia intermedia
           ATCC 29909]
 gi|238726791|gb|EEQ18325.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia intermedia
           ATCC 29909]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/395 (48%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKNLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVTQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDKSQEDKREADAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|188591290|ref|YP_001795890.1| succinyl-CoA synthetase subunit beta [Cupriavidus taiwanensis LMG
           19424]
 gi|226734941|sp|B2AHC1|SUCC_CUPTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|170938184|emb|CAP63170.1| succinyl-CoA synthetase, beta subunit [Cupriavidus taiwanensis LMG
           19424]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/386 (50%), Positives = 269/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEALKAAEQLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +A +AS++GGMDIEEVA   P+KI  L+I+P  G+T  D   +   + + 
Sbjct: 111 SLVVDRVSQKIALMASSEGGMDIEEVAAHTPEKIHTLIIEPSTGLTDADADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVAQARQALQGLYKAFYETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +V+ IL+NIFGGIMRCDV+ +G++SA K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNVQAILVNIFGGIMRCDVIAEGVISASKAVSLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A+SGL +I+A  +++
Sbjct: 351 GTNEELGRKMLADSGLPIISADTMEE 376


>gi|322692276|gb|EFY84205.1| putative succinyl-CoA ligase [Metarhizium acridum CQMa 102]
          Length = 473

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 244/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y V V KG V  +   A++  K +     V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYRSADLLRQYGVGVPKGAVAKTAEEAKAVAKEIGTEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S        ++++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPHEAEMFAQQMIGHKLITKQTGAGGRLCNAVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT +    +   L   
Sbjct: 154 AILMDRASQSPVIVSSSQGGMDIETVAKESPDAIITTYIDINTGVTDDIARGIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F ++D + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 214 EQCIEDAKDTIQKLYKIFVERDSTQIEINPLSETNDHQVLCMDAKFGFDDNANFRQKEVF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED  E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 EWRDTTQEDPDEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 334 GGATPAAIQEAFELITSDPKVTAIFVNIFGGIVRCDHIATGLIKTVENLNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+  +++I ESG+ + +  DL  AA+K V   K V
Sbjct: 394 GTNVERAHKIINESGMKIFSIDDLQSAAEKSVQLSKVV 431


>gi|220926857|ref|YP_002502159.1| malate--CoA ligase subunit beta [Methylobacterium nodulans ORS
           2060]
 gi|219951464|gb|ACL61856.1| succinyl-CoA synthetase, beta subunit [Methylobacterium nodulans
           ORS 2060]
          Length = 392

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + VP+ KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVPIPKGAVAFSPDQAVYAATELGGWHWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  +   V    +++LG  L+T QTGP G  V  VY+E      RELYL
Sbjct: 58  -------GGIRLCKTYNEVRDAAKDLLGKRLVTHQTGPEGKPVQRVYIETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+   +   L   L L 
Sbjct: 111 GFVLDRKAERVRVIASQRGGMDIEEIAATDPEALLQVVVEPAVGLQQFEARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          + Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVGGAVKTIMSAYRAFRDCDATMLEINPLVVTKDDRILALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNL+YI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMYDPSQSDPREAQASEHNLNYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EV+I +PLV+RL 
Sbjct: 291 GGASPQRVATAFRLVLSDPNVKAILVNIFAGINRCDWIAQGVIQAAQEVQITVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  ++ +SGLN+ITA  L +AA+K V AVKG
Sbjct: 351 GTNVEAGKAILEKSGLNLITADTLTEAAEKAVQAVKG 387


>gi|121609683|ref|YP_997490.1| succinyl-CoA synthetase subunit beta [Verminephrobacter eiseniae
           EF01-2]
 gi|189030224|sp|A1WLG5|SUCC_VEREI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|121554323|gb|ABM58472.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 194/398 (48%), Positives = 262/398 (65%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKDILRQFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V      +LG  L T QTGP G +V  +Y+E+GADI +E YL
Sbjct: 52  -GGRGKGGGVQLAKTIDEVRRLAGSMLGMQLKTHQTGPEGQKVRRLYIEEGADIGKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  +AFIAS++GGMDIEEV +  P+ I    +DPL G+  E    +   + L 
Sbjct: 111 SIVTDRATQKLAFIASSEGGMDIEEVKRAKPEMIITEFVDPLAGLGPEQALKIAVGIGLP 170

Query: 181 GQARIDG--GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             A+      D+   LY+ + D D SLLEINPL      RL  LD+K +FD NAL+RH +
Sbjct: 171 APAQAQAQAVDIMRRLYQCYMDTDASLLEINPLNCDGQNRLTALDAKFNFDANALWRHPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I   RD  EED  E+ A + +L+YI++DGNIGC+VNGAGLAMATMD IKL+GGAPANFLD
Sbjct: 231 IVAYRDFEEEDPAEVLASKFDLAYISMDGNIGCLVNGAGLAMATMDTIKLFGGAPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  +KV  AFKI+  +  VKGIL+NIFGGIMRCD +  G++SA K V +++PLV+R
Sbjct: 291 VGGGATAEKVTEAFKIMLGNPKVKGILVNIFGGIMRCDTIATGVISACKAVNLSVPLVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           ++G N + G +L+AESGL +I A  + DAAQ+IV AV+
Sbjct: 351 MKGTNEEPGKKLLAESGLPIIAADTMADAAQRIVAAVR 388


>gi|193070631|ref|ZP_03051568.1| succinate-CoA ligase, beta subunit [Escherichia coli E110019]
 gi|192956019|gb|EDV86485.1| succinate-CoA ligase, beta subunit [Escherichia coli E110019]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F +L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMDLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|110597778|ref|ZP_01386062.1| succinyl-CoA synthetase, beta subunit [Chlorobium ferrooxidans DSM
           13031]
 gi|110340685|gb|EAT59165.1| succinyl-CoA synthetase, beta subunit [Chlorobium ferrooxidans DSM
           13031]
          Length = 392

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/399 (47%), Positives = 268/399 (67%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK----TLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A++A +     L  P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVAVPKGIVAYSPEEAKTAAEQLFEELSCPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +      ++++G TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAKSAEEAFEIAQQLIGLTLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR++     + ST+GGM+IE+VA++ P+K+ K+ IDPL G+           
Sbjct: 111 EFYVGITLDRSTSQNVLMVSTEGGMEIEKVAEETPEKLLKIQIDPLYGMQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +  +    LYKA+   D ++ EINPL++ K G++  LD+KI+FDDNALYRH
Sbjct: 171 LGLEGEQFRNAVNFISALYKAYTSIDAAIAEINPLVVTKEGKVLALDAKINFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+I+L GG PANF
Sbjct: 231 KEFIELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    V   FKII SD +VK IL+NIFGGI+RCD +  GI+ A  ++ +++P++
Sbjct: 291 LDVGGSASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAATKIGLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N  I  +++ +SGLN+I+A  L DAAQK+  A+
Sbjct: 351 VRLEGTNAPIAQKMLDDSGLNLISANGLRDAAQKVNKAL 389


>gi|27363638|ref|NP_759166.1| succinyl-CoA synthetase subunit beta [Vibrio vulnificus CMCP6]
 gi|320157039|ref|YP_004189418.1| succinyl-CoA ligase (ADP-forming) subunit beta [Vibrio vulnificus
           MO6-24/O]
 gi|33301655|sp|Q8DFQ1|SUCC_VIBVU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|27359754|gb|AAO08693.1| Succinyl-CoA ligase [ADP-forming] beta chain [Vibrio vulnificus
           CMCP6]
 gi|319932351|gb|ADV87215.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio vulnificus
           MO6-24/O]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRKVLAESGLDIIAAESLTDAAQKVVAAAEG 387


>gi|317491188|ref|ZP_07949624.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920735|gb|EFV42058.1| succinate-CoA ligase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEEIRAFAENWLGKRLVTYQTDALGQPVHQILVEGATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA + P  I K  IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVADETPHLIHKTAIDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+S D NAL+R  +++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLSADGNALFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDARESQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|296157296|ref|ZP_06840132.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. Ch1-1]
 gi|295892632|gb|EFG72414.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. Ch1-1]
          Length = 389

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL +I A  +++AAQK+V A  G
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADSMEEAAQKVVAAASG 387


>gi|83647429|ref|YP_435864.1| succinyl-CoA synthetase subunit beta [Hahella chejuensis KCTC 2396]
 gi|123531731|sp|Q2SD35|SUCC_HAHCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83635472|gb|ABC31439.1| Succinyl-CoA synthetase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/385 (49%), Positives = 258/385 (67%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV+KG    S   A SA  ++ G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFADYGLPVSKGFACESAQEAMSAADSIGGSQWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKLVSSKEEIKAFAEKWLGHNLVTYQTDEKGQPVNKILVESCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  + F+AST+GG++IE+VA++ P+KI K +IDPL+G        L   L L 
Sbjct: 111 GAVMDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAVIDPLVGAQPYQARELAFALGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D++LLE+NPL+I K G L  LD+K+  D NALYR   I+
Sbjct: 171 SDQVKQFTKIFLGLAKLFQDLDLALLEVNPLVITKGGNLHCLDAKVVVDGNALYRQPRIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 DMHDPSQEDPREAHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G + +A+SGLN+I A  L 
Sbjct: 351 GNNAELGAKKLADSGLNIIAAESLT 375


>gi|332342063|gb|AEE55397.1| oxoglutarate dehydrogenase, succinyl-CoA synthetase beta chain SucC
           [Escherichia coli UMNK88]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGVPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|261822341|ref|YP_003260447.1| succinyl-CoA synthetase subunit beta [Pectobacterium wasabiae
           WPP163]
 gi|261606354|gb|ACX88840.1| succinyl-CoA synthetase, beta subunit [Pectobacterium wasabiae
           WPP163]
          Length = 388

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/395 (48%), Positives = 261/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L  AAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAV 385


>gi|87119164|ref|ZP_01075062.1| succinyl-CoA synthetase subunit beta [Marinomonas sp. MED121]
 gi|86165555|gb|EAQ66822.1| succinyl-CoA synthetase subunit beta [Marinomonas sp. MED121]
          Length = 388

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ G    +   A  A K + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGYACDTPEEAVEAAKKIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +     + +G  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTHEEIAEFTNQWIGKNLVTYQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG+DIE VA++ P+ I K +IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVDIETVAEETPELIHKAIIDPLVGAQPYQARELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L + F D D +LLEINPL+I + G +  LD KI+ D NA+YR   +Q
Sbjct: 171 PTQIKQFTKVFLGLSQMFHDFDFALLEINPLVITEEGNIHCLDGKINIDSNAVYRQKKMQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVQVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+S L++I A  L DAA ++V A +G
Sbjct: 351 GTNAELGREVLAKSDLDIIAASSLKDAAVQVVKAAEG 387


>gi|78188316|ref|YP_378654.1| succinyl-CoA synthetase subunit beta [Chlorobium chlorochromatii
           CaD3]
 gi|123580399|sp|Q3ATR4|SUCC_CHLCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78170515|gb|ABB27611.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
           chlorochromatii CaD3]
          Length = 390

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/399 (47%), Positives = 261/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A+ A + L       + VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVTVPKGIVAYSADEAKQAAEQLFAETGSSVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +      R+++G TLIT QTGP G  V+ + +E+G  I +
Sbjct: 61  A----------GGVKLAKSPEEAFEIARQMIGMTLITHQTGPEGKVVSRLLIEEGMGIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE VA++ P+K+ K+ IDPL G+           
Sbjct: 111 EFYVGITLDRATSRNVLMVSTEGGMEIETVAEETPEKLLKIQIDPLFGMQGFQAREAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+   +  +    LYKA+   D S+ EINPL++   G++  LD+KI+FDDNALYRH
Sbjct: 171 LGLEGEQFRNAVNFITALYKAYTSIDASVAEINPLVVTSEGKVIALDAKINFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +  ELRD SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMDII+L GG PANF
Sbjct: 231 KEYMELRDTSEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    V   FKII SD +V+ IL+NIFGGI+RCD +  GI+ A K++ +++P++
Sbjct: 291 LDVGGTASPQTVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIMEAAKKMDLHLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N  I  +++ ESGL++I A  L DAAQK+  A+
Sbjct: 351 VRLEGTNASIAQQMLDESGLSLIAAKGLRDAAQKVQEAL 389


>gi|209776474|gb|ACI86549.1| succinyl-CoA synthetase beta subunit [Escherichia coli]
          Length = 388

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDSREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|157803807|ref|YP_001492356.1| succinyl-CoA synthetase subunit beta [Rickettsia canadensis str.
           McKiel]
 gi|189081785|sp|A8EYY8|SUCC_RICCK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157785070|gb|ABV73571.1| succinyl-CoA synthetase subunit beta [Rickettsia canadensis str.
           McKiel]
          Length = 386

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 197/395 (49%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY +P + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGIPTSTGLVVTKTEQINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +V  +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKIAHDMFGINLVTHQTGPQGQKVKRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST GG+DIEEVAK  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTAGGVDIEEVAKKTPEKIVKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FD+NAL++H ++ 
Sbjct: 171 DNQVKQMKEIVKSVYNAFIETDATQIEINPLIVKTDGDLLALDAKITFDENALFKHPNVT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 AMRDYDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +++  AFKII SD  V+G+L+NIFGGIMRCD++ +GI++A KE+ I +PLV+RL 
Sbjct: 291 GGADCERIKEAFKIILSDKKVQGVLVNIFGGIMRCDIISEGIIAAAKEIDIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G ++++ SGL +ITA DL DAA KIV A+
Sbjct: 351 GTNVEKGKKILSNSGLEIITAHDLADAANKIVEAI 385


>gi|160872177|ref|ZP_02062309.1| succinyl-CoA synthetase beta chain (SCS-beta) [Rickettsiella
           grylli]
 gi|159120976|gb|EDP46314.1| succinyl-CoA synthetase beta chain (SCS-beta) [Rickettsiella
           grylli]
          Length = 390

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 199/397 (50%), Positives = 276/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ KALL +Y +PV +G + S+V  A +A + L G  ++VK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKALLSEYGLPVPRGKLASTVEEALAATEALGGSAWMVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +S ++V  +++ +LG  L+T QT   G  VN V +    DI RELYL
Sbjct: 58  -------GGVKYVTSKEAVAIEVKRLLGQRLVTPQTDEKGQPVNHVLIAQPCDIKRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++ R++  +  +AST+GG++IE+VA++ P+KI K++ DPL+GV       L   L+L 
Sbjct: 111 GVVLCRSTQRIIMMASTEGGVEIEKVAEETPEKIVKVICDPLLGVMPYQARDLAFQLKLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   L + F ++D+SL+EINPLI  + G L  LD+K+  DDNAL+R  + +
Sbjct: 171 PNQVKEFTSILLGLGRLFVERDLSLIEINPLICDEKGHLICLDAKVVVDDNALFRQPECR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED+RE  A    L+YIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPSQEDARENRAHDWELNYIALDGDIGCMVNGAGLAMATMDLIKLQGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII SD  VKGIL+NIFGGI+RCD++ +GI+ AVKEV I IP+V+RLE
Sbjct: 291 GGATQERVAEAFKIILSDEKVKGILVNIFGGIVRCDMIAEGIIGAVKEVGIKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G + ++ESGLN+I A  L +AA+ I+ AVK 
Sbjct: 351 GNNADVGAKKLSESGLNIIAAKSLTEAAEHIIAAVKS 387


>gi|301767492|ref|XP_002919160.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 467

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 57  LSLHEYMSMDLLQEAGVSIPKGHVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 116

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 117 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 173

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 174 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 233

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 234 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 293

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED RE  A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 294 DLQDWTQEDERERGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 354 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 413

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI +SGL ++   DLD+AA+ +V   + V
Sbjct: 414 GTRVDDAKALITDSGLKILACDDLDEAAKMVVKLSEIV 451


>gi|188581004|ref|YP_001924449.1| malate--CoA ligase subunit beta [Methylobacterium populi BJ001]
 gi|179344502|gb|ACB79914.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
           BJ001]
          Length = 390

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLDGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PLV+RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +++AESGL++ITA  L +AA+K V A +G
Sbjct: 351 GTNVEEGKKILAESGLDLITADTLTEAARKAVEACRG 387


>gi|78221949|ref|YP_383696.1| succinyl-CoA synthetase subunit beta [Geobacter metallireducens
           GS-15]
 gi|78193204|gb|ABB30971.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           metallireducens GS-15]
          Length = 385

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/395 (48%), Positives = 261/395 (66%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y++PV +G V  +    E A K + G   V+K+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSSYSIPVPRGRVALTSDQVERAAKEMGG-RCVIKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  L+T QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQDYGKELFGKRLVTPQTGPEGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GG+DIEEVA+  P+KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRATSRYCLIASAEGGVDIEEVAQKSPEKIHVLTIDPYTGLRPYLARKIALALGLT 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLYK   DKD SL+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSLCEDCVELMLNLYKVVLDKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAVFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K YGG PANFLDVG
Sbjct: 230 DMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMATLDVLKEYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D+ VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILEDADVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCTLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G+ V  G +L+ +SGLNV TA  L + A++IV  +
Sbjct: 350 GSKVLEGKQLLVDSGLNVQTADSLGEGAERIVQML 384


>gi|238920747|ref|YP_002934262.1| succinyl-CoA synthetase subunit beta [Edwardsiella ictaluri 93-146]
 gi|259511781|sp|C5BEM7|SUCC_EDWI9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|238870316|gb|ACR70027.1| succinyl-CoA synthetase beta chain [Edwardsiella ictaluri 93-146]
          Length = 388

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/397 (46%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P  +G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAQYGLPTPEGYACSTPCQAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   S +++ +   + LG  L+T QT   G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKCVESKEAIHAFAEQWLGKRLVTYQTDAHGQPVRQILVEGATEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEQVAQKTPHLIHRVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G +F  L   F   D+++ EINPL+I   G L  LD K+  D NAL+R   + 
Sbjct: 171 GKQAQQFGQIFLGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPTLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++ D+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMEDPAQNDAREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  V+ +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEHVRAVLVNIFGGIVRCDLIADGIIGAVAEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R++A+SGLN+I A  L DAA+++V AV+G
Sbjct: 351 GNNAELGTRILADSGLNIIAATSLTDAARQVVSAVEG 387


>gi|320177271|gb|EFW52277.1| Succinyl-CoA ligase [ADP-forming] beta chain [Shigella dysenteriae
           CDC 74-1112]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 199/397 (50%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ PQ I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R LD++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQLDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+SAV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIISAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|261341314|ref|ZP_05969172.1| succinyl-CoA ligase [ADP-forming] subunit beta [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316618|gb|EFC55556.1| succinyl-CoA ligase [ADP-forming] subunit beta [Enterobacter
           cancerogenus ATCC 35316]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKDEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLANIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|332160920|ref|YP_004297497.1| succinyl-CoA synthetase subunit beta [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318604825|emb|CBY26323.1| succinyl-CoA ligase [ADP-forming] beta chain [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665150|gb|ADZ41794.1| succinyl-CoA synthetase subunit beta [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330862915|emb|CBX73050.1| succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           enterocolitica W22703]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKVALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDKSQEDEREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|146310886|ref|YP_001175960.1| succinyl-CoA synthetase subunit beta [Enterobacter sp. 638]
 gi|189030240|sp|A4W879|SUCC_ENT38 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145317762|gb|ABP59909.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Enterobacter
           sp. 638]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACNTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ IDPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F ++D++L+EINPL+I   G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLAKIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQSDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|260767661|ref|ZP_05876596.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio furnissii CIP
           102972]
 gi|260617170|gb|EEX42354.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio furnissii CIP
           102972]
 gi|315179507|gb|ADT86421.1| succinyl-CoA synthetase subunit beta [Vibrio furnissii NCTC 11218]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 261/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL++   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGQMFAQYDLALLEINPLVVTGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A+SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRDVLAKSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|238756025|ref|ZP_04617349.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia ruckeri
           ATCC 29473]
 gi|238705750|gb|EEP98143.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia ruckeri
           ATCC 29473]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 193/395 (48%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGFACSTPREAEEAASKIGSAPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEQWLGKQLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRASRRVIFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFMGLAALFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|261492658|ref|ZP_05989211.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261494593|ref|ZP_05991074.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261309705|gb|EEY10927.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311817|gb|EEY12967.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 385

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 194/395 (49%), Positives = 270/395 (68%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK + ++Y +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +Y+E+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETCNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AS+ GGM+IEEVA+  P+ I K +IDPL G        L   L L+
Sbjct: 111 GAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L   F +KD++LLE+NPL+I K G+L  LD+K+S D NALYRH +++
Sbjct: 171 GDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSIDSNALYRHPELK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL+D S++D RE EA++ NL+Y+ALDGNIGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAFK+I SD +VK +L+NIFGGI+RCD++  G+++AV EV +N+P+++RLE
Sbjct: 291 GGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIAAVNEV-VNVPVIVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N   G  ++A SGL+++ A  L  AA+  V + 
Sbjct: 350 GTNAAQGREILANSGLSILAASSLKQAAELAVKSA 384


>gi|238785860|ref|ZP_04629828.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia bercovieri
           ATCC 43970]
 gi|238713230|gb|EEQ05274.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia bercovieri
           ATCC 43970]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 265/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACSTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|269139927|ref|YP_003296628.1| succinyl-CoA synthetase subunit beta [Edwardsiella tarda EIB202]
 gi|267985588|gb|ACY85417.1| succinyl-CoA synthetase subunit beta [Edwardsiella tarda EIB202]
 gi|304559762|gb|ADM42426.1| Succinyl-CoA ligase [ADP-forming] beta chain [Edwardsiella tarda
           FL6-60]
          Length = 388

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/397 (46%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPTPVGYACSTPRQAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   S +++ +   + LG  L+T QT   G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKCVESKEAIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEGATEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEQVAQKTPHLIHRVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G +F  L   F   D+++ EINPL+I   G L  LD K+  D NAL+R   ++
Sbjct: 171 GKQAQQFGQIFMGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPALR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D  + D+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMEDPEQNDAREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  V+ +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEHVRAVLVNIFGGIVRCDLIADGIIGAVAEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R++A+SGLN+I A  L DAA+++V AV+G
Sbjct: 351 GNNAELGTRILADSGLNIIAATSLTDAARQVVSAVEG 387


>gi|227327547|ref|ZP_03831571.1| succinyl-CoA synthetase subunit beta [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/395 (48%), Positives = 261/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L  AAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTGAAQQVVAAV 385


>gi|330831784|ref|XP_003291936.1| succinate-CoA ligase (GDP-forming) [Dictyostelium purpureum]
 gi|325077850|gb|EGC31536.1| succinate-CoA ligase (GDP-forming) [Dictyostelium purpureum]
          Length = 424

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/396 (48%), Positives = 260/396 (65%), Gaps = 2/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEYQ+K L+ K+ V   K  V+   + A  A   L     VVK+Q+HAGGRGKG F 
Sbjct: 30  LDLHEYQSKQLMDKFGVNTQKWRVVKQANEATKAADELNAKELVVKAQVHAGGRGKGHFI 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV +  + K      +E+LG  L+TKQT   G++V  V + +  D  RELYL
Sbjct: 90  E--TGFKGGVHLCKTGKEAERLCKEMLGKHLVTKQTTAEGTKVQSVMLAESVDPARELYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR  G    IAS +GG+DIE VA++ P+ IFK  ID + G+ SE    L + L   
Sbjct: 148 AIVMDRKYGGPVMIASPKGGVDIESVAEETPELIFKEPIDIIGGIKSEQSKRLAEKLGFT 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          NLY+ F   D + +E+NP     +G++  +D+KI+FDDNA +R  +I 
Sbjct: 208 GEKVAIAQKQMENLYQLFIKCDATQVEVNPFAETTDGKIYAMDAKINFDDNASFRQKEIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED RE+EA +  L+YI LDG IGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 268 AMRDFAEEDQREVEASKFGLNYIGLDGTIGCMVNGAGLAMATMDIIKLKGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++ V  AFKI+T D  VK IL+NIFGGIM+CD++  GI++A K++ + IPLV+RLE
Sbjct: 328 GSASEEAVTEAFKIVTKDPRVKSILVNIFGGIMKCDIIASGIVNASKQIGLTIPLVVRLE 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV +G +++ +SGLN+ITA DLDDAA K V  +K
Sbjct: 388 GTNVQLGKQILEKSGLNIITANDLDDAAVKAVATLK 423


>gi|238757971|ref|ZP_04619152.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia aldovae
           ATCC 35236]
 gi|238703725|gb|EEP96261.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia aldovae
           ATCC 35236]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/395 (48%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKKLVTYQTDANGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G  S     L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQSYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVNQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED  E  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDKNEERAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|56696452|ref|YP_166809.1| malate--CoA ligase subunit beta [Ruegeria pomeroyi DSS-3]
 gi|56678189|gb|AAV94855.1| malate--CoA ligase, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 399

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEILANFGVDIPPGALAYSPEQAAYRAREIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V SS   +      + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCSSDAEIQETCENLFGRKLVTHQTGPEGKGIYRVYVEGAVPIEREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V  +AS +GGM+IEE++ + P  I +  ++P +G+       +   L + 
Sbjct: 111 GFVLDRSSQRVMIVASAEGGMEIEEISAEKPDSIVRATVEPAVGLQDFQCRQIAFKLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PALTARMVRTLQGCYQAFSEYDATMVEINPLVITGDNRILALDAKMTFDDNALFRHPHIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SDS+V+ +L+NIF GI RCD + +G++ A+KEV++ +P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDSNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVEVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A +
Sbjct: 351 GTNVEEGQKILAKSGLPIIRARTLMEAAERAVGAWQ 386


>gi|312970805|ref|ZP_07784984.1| succinyl-CoA synthetase beta chain [Escherichia coli 1827-70]
 gi|310336566|gb|EFQ01733.1| succinyl-CoA synthetase beta chain [Escherichia coli 1827-70]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y++P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYDLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|86158052|ref|YP_464837.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123497647|sp|Q2IIC1|SUCC_ANADE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|85774563|gb|ABC81400.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 203/396 (51%), Positives = 258/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRK+ V V +G +  +   AE A + L G +  VK+QIHA         
Sbjct: 1   MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGISAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          +LG  L T QTGP G  V  VYVE+G  I RELYL
Sbjct: 52  -GGRGKGGGVKLARSPDEARQHAEAMLGMMLKTPQTGPEGQEVRKVYVEEGCRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G +A +AS +GG+DIEEVA  +P KI +  I PL G+       L   L L 
Sbjct: 111 GMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          LY A+   D SL EINPL+I   G +  LD+K++FDDNALYRH DI 
Sbjct: 171 GDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED +E +AK+++LSYIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+DKV AAFKII SD  VK +L+NIFGGIM+CDV+  GI++A K+V ++IPLV+RLE
Sbjct: 291 GGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++A S L +I A DL +AA+K V A +
Sbjct: 351 GTNVELGKEILAHSELKIIPADDLGEAARKAVQAAR 386


>gi|91793535|ref|YP_563186.1| succinyl-CoA synthetase subunit beta [Shewanella denitrificans
           OS217]
 gi|123356720|sp|Q12M63|SUCC_SHEDO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91715537|gb|ABE55463.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           denitrificans OS217]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V SS   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTSSKDEIRAFAENWLGKNLVTYQTDAKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG+DIE VA+  P+ I   +IDPL G  +     L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVDIETVAEHTPELIHTAIIDPLTGPQAYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLANMFNDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEG 387


>gi|37679218|ref|NP_933827.1| succinyl-CoA synthetase subunit beta [Vibrio vulnificus YJ016]
 gi|71153553|sp|Q7MMN3|SUCC_VIBVY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|37197961|dbj|BAC93798.1| succinyl-CoA synthetase beta subunit [Vibrio vulnificus YJ016]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +P+ +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPIPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++AESGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRKVLAESGLDIIAAESLTDAAQKVVAAAEG 387


>gi|163761408|ref|ZP_02168482.1| succinyl-CoA synthetase subunit beta [Hoeflea phototrophica DFL-43]
 gi|162281403|gb|EDQ31700.1| succinyl-CoA synthetase subunit beta [Hoeflea phototrophica DFL-43]
          Length = 398

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 269/397 (67%), Positives = 332/397 (83%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ +  PVA+GV I S   AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGFGAPVAEGVAIFSADEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+    +   E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAFSIDEAKAHAAEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT G VAF+ ST+GGMDIE VA++ P+KI  + IDP  GVT+ D+A L   LEL 
Sbjct: 121 SILVDRTVGQVAFVVSTEGGMDIEAVAEETPEKIITVAIDPEAGVTAADLAKLNGALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  DG  LFP LYKAF +KDM+LLE+NPLI+MK+GRLRVLD+K+SFD+NAL+RH DI 
Sbjct: 181 GEAAADGEKLFPILYKAFVEKDMALLEVNPLIVMKDGRLRVLDAKVSFDNNALFRHDDIV 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EED++EIEA +++L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDLTEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGQEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV +G ++I ESGL+VI A DLDDAAQKIV+AVKG
Sbjct: 361 GTNVALGKKIINESGLDVIAADDLDDAAQKIVNAVKG 397


>gi|149374983|ref|ZP_01892756.1| succinyl-CoA synthetase subunit beta [Marinobacter algicola DG893]
 gi|149360872|gb|EDM49323.1| succinyl-CoA synthetase subunit beta [Marinobacter algicola DG893]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++GV   +   A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSQGVACDTPQEAVAAATEIGGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   +     + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKDEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIEQVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D+D++LLEINPL+I   G L  LD+KI  D NALYR   I 
Sbjct: 171 GKQIGQFTKIFMGLAKLFEDRDLALLEINPLVITPAGDLHCLDAKIGVDGNALYRQKKIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+EDSRE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 EMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD SVK +L+NIFGGI+RCD++ +GI+ AVK+V + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDSVKAVLVNIFGGIVRCDMIAEGIIGAVKDVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G +++A+SGLN+I A  L DAA+++V A  G
Sbjct: 351 GNNAEKGTQVLADSGLNIIAATSLADAAEQVVKAAGG 387


>gi|238752118|ref|ZP_04613601.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia rohdei
           ATCC 43380]
 gi|238709695|gb|EEQ01930.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia rohdei
           ATCC 43380]
          Length = 388

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATMFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|6980728|pdb|1CQI|B Chain B, Crystal Structure Of The Complex Of Adp And Mg2+ With
           Dephosphorylated E. Coli Succinyl-Coa Synthetase
 gi|6980730|pdb|1CQI|E Chain E, Crystal Structure Of The Complex Of Adp And Mg2+ With
           Dephosphorylated E. Coli Succinyl-Coa Synthetase
 gi|6980732|pdb|1CQJ|B Chain B, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa
           Synthetase
 gi|6980734|pdb|1CQJ|E Chain E, Crystal Structure Of Dephosphorylated E. Coli Succinyl-Coa
           Synthetase
          Length = 385

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/395 (49%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAV 385


>gi|226945042|ref|YP_002800115.1| Succinyl-CoA synthetase subunit beta [Azotobacter vinelandii DJ]
 gi|259511776|sp|C1DM53|SUCC_AZOVD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226719969|gb|ACO79140.1| Succinyl-CoA synthetase, beta subunit [Azotobacter vinelandii DJ]
          Length = 389

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/396 (46%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV++GV I +  AA  A   + G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSRGVAIDTPEAAAEACDRIGGDCWVAKVQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +         LG  L+T QT  +G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKLVKSREEAKVFAVNWLGKRLVTYQTDASGQPVGKILVEACTEIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVNIEQVAHETPEKILKASIDPLVGAQPFQARDLAFRLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+E+NPL++ K+G L  LD+KI+ D NAL+R   ++
Sbjct: 171 GDQLKQFTHIFIGLAKLFQEHDLALVEVNPLVVQKDGNLLCLDAKINLDTNALFRQPRLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE+ A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREVHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD+ VK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDAKVKAVLVNIFGGIVRCDMIAEGIIGAVREVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A SGLN+I A  L DAA ++V A +
Sbjct: 351 GNNAELGAEMLARSGLNIIPASTLTDAAVQVVKAAE 386


>gi|325294374|ref|YP_004280888.1| succinyl-CoA ligase (ADP-forming) subunit beta [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064822|gb|ADY72829.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 389

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 193/398 (48%), Positives = 257/398 (64%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK + +KY +PV  G+V+ +   AE A K L  P+ VVK+Q+HAGGRGK    
Sbjct: 1   MKIHEYQAKEIFKKYKLPVPNGIVVYNAQEAEEAAKELGTPVVVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       E++G+ L T Q  P G  +NCV VE G +I +E Y+
Sbjct: 58  -------GGVKLAKSPEEAGKIASEMIGNRLRTYQN-PEGLPINCVLVEAGVNIDKEFYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR       + S  GGM+IEE+AK  P+ I K  IDP IG+       +   + + 
Sbjct: 110 GLTLDREVSRPVLMVSAAGGMEIEEIAKTNPELIIKEHIDPAIGLLPYQARKIAYKVGIT 169

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                     +   L K + + D SL+EINPL+  K G    LD+KI FDDNAL+RH DI
Sbjct: 170 DKNLLSQFVKIAMTLSKMYFELDASLIEINPLVQTKEGEFICLDAKIDFDDNALFRHKDI 229

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           QEL D ++ D  E+EAK+ +L+Y+ LDGNIGCMVNGAGLAMATMD IK YGG PANFLDV
Sbjct: 230 QELEDTTQIDPLELEAKKWDLNYVKLDGNIGCMVNGAGLAMATMDTIKYYGGEPANFLDV 289

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A  ++VAAAFK++ SD +VK I +NIFGGI+RCD +  GI+ A K+V+++ PL++RL
Sbjct: 290 GGTATVERVAAAFKLLLSDPNVKAIFVNIFGGIVRCDRIAGGIIEAAKQVELDRPLIVRL 349

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV++G +++ ESGLN+I A D+ D AQK V A KG
Sbjct: 350 EGTNVELGRKMLEESGLNIIPAKDMADGAQKAVKAAKG 387


>gi|21263966|sp|O97580|SUCB1_PIG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|3808237|gb|AAC69751.1| ATP-specific succinyl-CoA synthetase beta subunit [Sus scrofa]
          Length = 425

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 15  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 74

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 75  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 131

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 132 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 191

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 192 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 251

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 252 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 311

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 312 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 371

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 372 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 409


>gi|238790489|ref|ZP_04634258.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238721433|gb|EEQ13104.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 388

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDAHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATMFLERDLAMVEINPLVITKQGDLICLDGKLGADGNALFRQSELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|94309414|ref|YP_582624.1| succinyl-CoA synthetase subunit beta [Cupriavidus metallidurans
           CH34]
 gi|93353266|gb|ABF07355.1| succinyl-CoA synthetase, beta subunit [Cupriavidus metallidurans
           CH34]
          Length = 388

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/386 (50%), Positives = 269/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAEQLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDEVKTYATNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA   P+KI  L+I+P  G+   D   +   + + 
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIIEPSEGLKDSDADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF D D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWDTDASLAEINPLILTGDGKVVALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +V+ IL+NIFGGIMRCDV+ +G+++A K V++ +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNVQAILVNIFGGIMRCDVIAEGVITASKAVQLGVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A+SGL +I+A  +++
Sbjct: 351 GTNEELGRKMLADSGLPIISADTMEE 376


>gi|261210014|ref|ZP_05924313.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC341]
 gi|260840960|gb|EEX67497.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC341]
          Length = 388

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGDMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|123443156|ref|YP_001007130.1| succinyl-CoA synthetase subunit beta [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|189030227|sp|A1JRB6|SUCC_YERE8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122090117|emb|CAL12980.1| succinyl-CoA synthetase beta chain [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 388

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDVHGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA++ P+ I K+ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKVALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++++EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLAMVEINPLVITKQGDLVCLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDKSQEDEREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAAQ++V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAV 385


>gi|301157329|emb|CBW16818.1| succinyl-CoA synthetase beta chain [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|323129048|gb|ADX16478.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 388

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMLYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|114649575|ref|XP_001151014.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 4 [Pan troglodytes]
 gi|119629182|gb|EAX08777.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_c
           [Homo sapiens]
 gi|189054910|dbj|BAG37894.1| unnamed protein product [Homo sapiens]
 gi|261861562|dbj|BAI47303.1| succinate-CoA ligase, ADP-forming, beta subunit [synthetic
           construct]
 gi|311349138|gb|ADP91734.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349140|gb|ADP91735.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349142|gb|ADP91736.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349144|gb|ADP91737.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349146|gb|ADP91738.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349156|gb|ADP91743.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349162|gb|ADP91746.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349166|gb|ADP91748.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349168|gb|ADP91749.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349174|gb|ADP91752.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349176|gb|ADP91753.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349180|gb|ADP91755.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349182|gb|ADP91756.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349184|gb|ADP91757.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349186|gb|ADP91758.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349190|gb|ADP91760.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349192|gb|ADP91761.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349196|gb|ADP91763.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349198|gb|ADP91764.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349202|gb|ADP91766.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349204|gb|ADP91767.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349206|gb|ADP91768.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349208|gb|ADP91769.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349210|gb|ADP91770.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349212|gb|ADP91771.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349214|gb|ADP91772.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349216|gb|ADP91773.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
          Length = 463

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 447


>gi|328875764|gb|EGG24128.1| succinate-CoA ligase [Dictyostelium fasciculatum]
          Length = 435

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 193/395 (48%), Positives = 260/395 (65%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQA+ ++++Y +   KG V  +   AE   + L     V+K+QI AGGRGKG F 
Sbjct: 25  LNIHEYQAQKMMKQYGIDCPKGNVADTPEEAEKISEVLNAQDLVIKAQILAGGRGKGIF- 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV + S    V +  +++LG TLITKQTGP G  VN VY+ +   + RE+Y 
Sbjct: 84  --TSGLKGGVHICSDAAQVKNYAKKMLGYTLITKQTGPEGKVVNQVYIAERHYLRREMYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +G    I S +GGMDIE VAK+ P  I+   ID + GV  E  A L   L + 
Sbjct: 142 AILMDRKTGGPVMIGSPEGGMDIETVAKENPNAIYVEAIDIMQGVKPEQTARLAAKLGIS 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    LY  F   D +L+EINPL     G +  +D+K++FDDNA +R  +I 
Sbjct: 202 PKNIPKAQDQMQKLYDFFIKNDCTLVEINPLAETATGEVMCMDAKLNFDDNAAFRQKEIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE++A +++L+YI LDG IGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 262 ELRDRSQEDPREVKASEYDLNYIGLDGTIGCLVNGAGLAMATMDIIKHYGGNPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q +V  A K+I+SD  VK IL+NIFGGIM+CD++  GI++AVKE+ I  PLV+RL+
Sbjct: 322 GGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+   +++ ESGL +I A DLD+AA+K V   
Sbjct: 382 GTNVEYAKKIMEESGLRLIAADDLDEAAEKSVRIA 416


>gi|320659936|gb|EFX27478.1| succinyl-CoA synthetase subunit beta [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDLREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|18655528|pdb|1JLL|B Chain B, Crystal Structure Analysis Of The E197betaa Mutant Of E.
           Coli Scs
 gi|18655530|pdb|1JLL|E Chain E, Crystal Structure Analysis Of The E197betaa Mutant Of E.
           Coli Scs
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+ INPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIAINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|189499636|ref|YP_001959106.1| succinyl-CoA synthetase subunit beta [Chlorobium phaeobacteroides
           BS1]
 gi|226734935|sp|B3EN95|SUCC_CHLPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189495077|gb|ACE03625.1| succinyl-CoA synthetase, beta subunit [Chlorobium phaeobacteroides
           BS1]
          Length = 391

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/401 (48%), Positives = 259/401 (64%), Gaps = 14/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +LRK+ V V KG+V  S   A  A + L       + VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKDILRKFGVSVPKGIVAFSPAEARQAAEQLFEEQESNVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S +       +ILG+TL+T QTGP G  V  + VE+G +I +
Sbjct: 61  A----------GGVKLAQSPEEAYEIAGQILGATLVTHQTGPEGKEVRRLLVEEGMNIEK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+ + +DR +     + ST+GGM+IE+VA++ P KI K+ IDPL G+           
Sbjct: 111 EFYVGITLDRATSNNVLMVSTEGGMEIEKVAEETPDKILKIQIDPLHGLLGFQARQAAFF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           LEL G+   +G      LY A+   D SL EINPL++   GR+  LD+KI+FD NALYRH
Sbjct: 171 LELDGERFKNGVKFITALYNAYVSIDASLAEINPLVVTAEGRVLALDAKINFDSNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD  EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 KDFLELRDTGEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V   FKII SD +VK IL+NIFGGI+RCD +  G++ A K+V +N+P++
Sbjct: 291 LDVGGTASPETVTEGFKIIMSDKNVKAILVNIFGGIVRCDRVAAGVIEAAKKVGLNLPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +RLEG N +    ++ ESGLN+I+A  L DAA+KI  A+ G
Sbjct: 351 VRLEGTNAEAAQTMLDESGLNLISANGLRDAAEKINEALAG 391


>gi|34364605|emb|CAE45708.1| hypothetical protein [Homo sapiens]
          Length = 472

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 62  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 121

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 122 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 178

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 179 AITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 238

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 239 PYIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 298

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 299 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 358

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 359 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 418

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 419 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 456


>gi|197122638|ref|YP_002134589.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter sp. K]
 gi|220917421|ref|YP_002492725.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|226734921|sp|B4UDP4|SUCC_ANASK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778426|sp|B8JAE0|SUCC_ANAD2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|196172487|gb|ACG73460.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter sp. K]
 gi|219955275|gb|ACL65659.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 204/396 (51%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRK+ V V +G +  +   AE A + L G +  VK+QIHA         
Sbjct: 1   MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGISAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          +LG  L T QTGP G  V  VYVE+G  I RELYL
Sbjct: 52  -GGRGKGGGVKLARSPDEARQHAEAMLGMMLKTPQTGPDGQEVRKVYVEEGCRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G +A +AS +GG+DIEEVA  +P KI +  I PL G+       L   L L 
Sbjct: 111 GMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          LY A+   D SL EINPL+I   G +  LD+K++FDDNALYRH DI 
Sbjct: 171 GDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED +E +AK+++LSYIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPDEEDPKETQAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+DKV AAFKII SD  VK +L+NIFGGIM+CDV+  GI++A K+V ++IPLV+RLE
Sbjct: 291 GGADEDKVTAAFKIILSDPHVKAVLVNIFGGIMKCDVIANGIVAAAKQVGLSIPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++A S L +I A DL DAA+K+V A +
Sbjct: 351 GTNVELGKDILAHSELKIIPADDLGDAARKVVQAAR 386


>gi|258621148|ref|ZP_05716182.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM573]
 gi|262166195|ref|ZP_06033932.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus VM223]
 gi|262404435|ref|ZP_06080990.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC586]
 gi|258586536|gb|EEW11251.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM573]
 gi|262025911|gb|EEY44579.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus VM223]
 gi|262349467|gb|EEY98605.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. RC586]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|82543155|ref|YP_407102.1| succinyl-CoA synthetase subunit beta [Shigella boydii Sb227]
 gi|187732237|ref|YP_001879383.1| succinyl-CoA synthetase subunit beta [Shigella boydii CDC 3083-94]
 gi|123560272|sp|Q324I4|SUCC_SHIBS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734991|sp|B2TUB2|SUCC_SHIB3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81244566|gb|ABB65274.1| succinyl-CoA synthetase, beta subunit [Shigella boydii Sb227]
 gi|187429229|gb|ACD08503.1| succinate-CoA ligase, beta subunit [Shigella boydii CDC 3083-94]
 gi|320182932|gb|EFW57801.1| Succinyl-CoA ligase [ADP-forming] beta chain [Shigella flexneri CDC
           796-83]
 gi|332097636|gb|EGJ02611.1| succinyl-CoA synthetase beta chain [Shigella boydii 3594-74]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 198/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ PQ I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R LD++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQLDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|237730691|ref|ZP_04561172.1| succinyl-CoA synthetase subunit beta [Citrobacter sp. 30_2]
 gi|226906230|gb|EEH92148.1| succinyl-CoA synthetase subunit beta [Citrobacter sp. 30_2]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEHWLGKRLVTYQTDAHGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++ K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVVTKQGDLICLDGKLGADGNALFRQADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|870947|emb|CAA54876.1| putative succinyl-CoA synthetase beta subunit [Coxiella burnetii]
          Length = 390

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 274/396 (69%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL KYN+ V    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKYLLNKYNIAVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA+  P+KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQ 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 171 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 231 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 291 GGSATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 351 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 386


>gi|262170925|ref|ZP_06038603.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus
           MB-451]
 gi|261892001|gb|EEY37987.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio mimicus
           MB-451]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G+L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGKLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|145633074|ref|ZP_01788806.1| transcriptional regulator CysB [Haemophilus influenzae 3655]
 gi|144986300|gb|EDJ92879.1| transcriptional regulator CysB [Haemophilus influenzae 3655]
          Length = 389

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT  +G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLIQDVEEARSFAEKWLGQRLVTFQTDKSGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS+ GGMDIEE+A++ P  + K  IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASSAGGMDIEEIAQNSPHLLHKATIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GVQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV E+ + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIIRCDLIAEGVIAAVNEMGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++A+S +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILAQSDVNILTAQSLQQAAELAVNAAKG 387


>gi|56460607|ref|YP_155888.1| succinyl-CoA synthetase subunit beta [Idiomarina loihiensis L2TR]
 gi|81362170|sp|Q5QU21|SUCC_IDILO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56179617|gb|AAV82339.1| Succinyl-CoA synthetase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 388

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/384 (48%), Positives = 252/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L +++ +PV++G    +   A  A K + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEFGLPVSEGYACDTADEAVEAAKRIGGDIWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   + LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSLDDVRAFAEQWLGKNLVTFQTDEKGQPVAKILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE VA++ P+KI K  IDP +G        L   L L 
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIETVAEETPEKILKAEIDPTVGAQPYQGRELGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F   D++LLEINPL+I   G +  LD+K+  D NALYR   I+
Sbjct: 171 PDQVKQFTKVFMGLAKMFEQYDLALLEINPLVITDEGNVHCLDAKVGIDSNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE EA +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAEAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDSSVK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+++RLE
Sbjct: 291 GGATKERVSEAFKIILSDSSVKAVLVNIFGGIVRCDMIAEGIIGAVEEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + + ESGLN+I A  L
Sbjct: 351 GNNAELGTQKLNESGLNIIAAESL 374


>gi|153213728|ref|ZP_01948980.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 1587]
 gi|124115789|gb|EAY34609.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 1587]
          Length = 388

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 QMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V AV+G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAVEG 387


>gi|163735509|ref|ZP_02142941.1| succinyl-CoA synthetase subunit beta [Roseobacter litoralis Och
           149]
 gi|161391129|gb|EDQ15466.1| succinyl-CoA synthetase subunit beta [Roseobacter litoralis Och
           149]
          Length = 399

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 179/396 (45%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MDIHEYQAKEVLANFGVTVPDGALAYSPEQATYRARELGGERWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+   +      + G  +IT QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKVCSNDIEIQKASEGMFGQKMITHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  V  +AS +GGM+IEE+++  P+ I + +++P +G+       +   L + 
Sbjct: 111 GFVLDRTTQRVMIVASAEGGMEIEEISEKRPESIVRAIVEPAVGLREFQCRQIAFKLGVD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 AGLIQQMVRTLQGCYRAFTELDATMVEINPLVITTDNRVIALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD SV+ IL+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVLSDKSVQAILVNIFAGINRCDWVAEGVVQAIKEVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L++AA++ V A K
Sbjct: 351 GTNVEEGQKILAQSGLPIIRAATLNEAAERAVGAWK 386


>gi|114649582|ref|XP_001150870.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 2 [Pan troglodytes]
          Length = 441

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 31  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 91  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 148 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 425


>gi|149924786|ref|ZP_01913129.1| Succinyl-CoA synthetase [Plesiocystis pacifica SIR-1]
 gi|149814343|gb|EDM73942.1| Succinyl-CoA synthetase [Plesiocystis pacifica SIR-1]
          Length = 398

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 207/400 (51%), Positives = 270/400 (67%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           M IHEYQAK LLR   VPV +  V  +   A +A + L       + VVKSQIHAGGRGK
Sbjct: 1   MKIHEYQAKGLLRAAGVPVPQSQVAFTADEARAAAQKLIAETGIEVVVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           GRFKE P    GGV+V     +      ++LGSTL+T QTG  G +V  V +E G DI  
Sbjct: 61  GRFKEHP--DLGGVKVVKGADAAAEIAEKMLGSTLVTIQTGEEGKKVGRVLIEQGMDIAS 118

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELYL+  +DR +G V  +AS++GGMDIEEVA+ +P+KI K  +DP  G+   D  ++   
Sbjct: 119 ELYLAATLDRDTGRVMIMASSEGGMDIEEVAESHPEKILKSSVDPAFGMQGFDARAVAYG 178

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L+G+           +  A+ D D S+LEINPL++   G +  LD+K+ FDDNALYRH
Sbjct: 179 LGLEGKTARKMASFLGKIVTAYNDLDCSMLEINPLVVTGGGDVMALDAKVQFDDNALYRH 238

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++ LRD +EED  E+EA +  LSY+ALDG IGCMVNGAGLAMATMDIIK +G  PANF
Sbjct: 239 KDVEALRDETEEDPAELEAGKWGLSYVALDGTIGCMVNGAGLAMATMDIIKYFGSEPANF 298

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +++V AAFKII  D ++KGIL+NIFGGIM+CD +  G++ AVK++ + +PLV
Sbjct: 299 LDVGGGATEERVTAAFKIICKDPNLKGILVNIFGGIMKCDTIANGVVGAVKQIGLEVPLV 358

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NV++G  ++A SGL + +A  L DAAQKIV   K
Sbjct: 359 VRLEGTNVELGKEILANSGLKITSADSLRDAAQKIVEMTK 398


>gi|73989280|ref|XP_542566.2| PREDICTED: similar to Succinyl-CoA ligase [ADP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, betaA
           chain) (SCS-betaA) (ATP-specific succinyl-CoA synthetase
           beta subunit) [Canis familiaris]
          Length = 437

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 27  LSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 87  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 144 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 204 SNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED RE  A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 264 DLQDWTQEDEREKGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 324 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI +SGL ++   DLD+AA+ +V   + V
Sbjct: 384 GTRVDDAKALITDSGLKILACDDLDEAAKMVVKLSEIV 421


>gi|294637432|ref|ZP_06715723.1| succinyl-CoA ligase [ADP-forming] subunit beta [Edwardsiella tarda
           ATCC 23685]
 gi|291089425|gb|EFE21986.1| succinyl-CoA ligase [ADP-forming] subunit beta [Edwardsiella tarda
           ATCC 23685]
          Length = 388

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/397 (46%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPTPVGYACSTPRQAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +  + + +   + LG  L+T QT   G  V  + VE   +I RELYL
Sbjct: 58  -------GGVKCVARKEEIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEGATEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVIDRSSRRVVFMASTEGGVEIEQVAQQTPHLIHRVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G +F  L   F   D+++ EINPL+I   G L  LD K+  D NAL+R   ++
Sbjct: 171 GKQAQQFGQIFLGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPALR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D  + D+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMEDPEQNDAREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEHVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G R++A+SGLN+I A  L DAA+++V AV+G
Sbjct: 351 GNNAELGTRILADSGLNIIAATSLTDAARQVVAAVEG 387


>gi|39978185|ref|XP_370480.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|59802928|gb|AAX07669.1| succinyl-CoA ligase beta-chain-like protein [Magnaporthe grisea]
 gi|145013447|gb|EDJ98088.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 446

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL KY V V  G V  S   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 36  LSIHEYLSAELLSKYGVQVPAGRVARSGEEAEQVAKEIGHDDMVIKAQVLAGGRGKGTFD 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 96  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRPCNAVYICERKFARREFYL 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT E    +   L   
Sbjct: 153 AILMDRGSQSPVIVSSSQGGMDIEGVAKENPDAIVTTHIDINTGVTDETARDIAQKLGFS 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KDM+ +EINPL    + ++  +D+K  FDDNA +R  +I 
Sbjct: 213 EQCIEDAKDTIQKLYKIFIEKDMTQIEINPLSETSDHKVMCMDAKFGFDDNAEFRQKEIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 273 EKRDTTQEDAEEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  + +NIFGGI+RCD +  G+++ VK + + +P++ RL+
Sbjct: 333 GGATPAAIKEAFELITSDQKVSAVFVNIFGGIVRCDHIANGLINTVKTLNLKVPIIARLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+  +++I +SG+ + +  DL  AA+K V   K V
Sbjct: 393 GTNVEQAHQIINDSGMKIFSIDDLQSAAEKAVQLSKVV 430


>gi|283833987|ref|ZP_06353728.1| succinyl-CoA ligase [ADP-forming] subunit beta [Citrobacter youngae
           ATCC 29220]
 gi|291070121|gb|EFE08230.1| succinyl-CoA ligase [ADP-forming] subunit beta [Citrobacter youngae
           ATCC 29220]
          Length = 388

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACNTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 387


>gi|11321583|ref|NP_003841.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           precursor [Homo sapiens]
 gi|94730427|sp|Q9P2R7|SUCB1_HUMAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Renal carcinoma
           antigen NY-REN-39; AltName: Full=Succinyl-CoA synthetase
           beta-A chain; Short=SCS-betaA; Flags: Precursor
 gi|7328935|dbj|BAA92873.1| ATP specific succinyl CoA synthetase beta subunit precursor [Homo
           sapiens]
 gi|20380655|gb|AAH27587.1| Succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
 gi|55957255|emb|CAI15149.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
 gi|311349148|gb|ADP91739.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349150|gb|ADP91740.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349152|gb|ADP91741.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349154|gb|ADP91742.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349158|gb|ADP91744.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349160|gb|ADP91745.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349164|gb|ADP91747.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349170|gb|ADP91750.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349172|gb|ADP91751.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349178|gb|ADP91754.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349188|gb|ADP91759.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349194|gb|ADP91762.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
 gi|311349200|gb|ADP91765.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
           sapiens]
          Length = 463

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 447


>gi|170744591|ref|YP_001773246.1| malate--CoA ligase subunit beta [Methylobacterium sp. 4-46]
 gi|168198865|gb|ACA20812.1| succinyl-CoA synthetase, beta subunit [Methylobacterium sp. 4-46]
          Length = 392

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + VP+ KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVPIPKGAVAFSPDQAVYAATELGGWHWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  +   V    +++LG  L+T QTGP G  V  VY+E      RELYL
Sbjct: 58  -------GGIRLCKTYNEVRDAAKDLLGKRLVTHQTGPEGKPVQRVYIETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+   +   L   L L 
Sbjct: 111 GFVLDRKAERVRVIASQRGGMDIEEIAATDPEALLQVVVEPAVGLQQFEARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          + Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 171 IKQVGGAVKTIMSAYRAFRDCDATMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRTIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNL+YI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMYDPSQSDPREAQAAEHNLNYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EV+I +PLV+RL 
Sbjct: 291 GGASPQRVATAFRLVLSDPNVKAILVNIFAGINRCDWIAQGVIQAAQEVQIGVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  ++ +SGL++ITA  L +AAQK V AVKG
Sbjct: 351 GTNVEAGKAILEKSGLDLITADTLTEAAQKAVQAVKG 387


>gi|326435989|gb|EGD81559.1| Suclg2 protein [Salpingoeca sp. ATCC 50818]
          Length = 420

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 182/386 (47%), Positives = 253/386 (65%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L++K+ V V +     +   AE   + L    YV+K+Q+HAGGRGKG F 
Sbjct: 23  LNLHEYQSKGLMQKHGVTVQRFRFAETPEQAEEGARDLAAREYVLKAQVHAGGRGKGTF- 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ +  K V     ++LG  L+TKQT P G  V+ + V +  DI RE Y 
Sbjct: 82  --SSGLQGGVKLTTDPKQVKEYASQMLGYKLVTKQTPPDGVLVSKLMVAEALDIARETYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS +GG+DIEEVA   P+ IFK  ID + GVT E +  L   L  +
Sbjct: 140 AILMDRDSNGPVMVASPEGGVDIEEVAAKTPELIFKEPIDIVKGVTEEQLDRLAINLRFE 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ   D  +    LY+ F   D + +EINP     +G++   D+KI+FDDNA +R  +I 
Sbjct: 200 GQQFHDAKEQMRKLYELFLAVDATQVEINPFAETPDGQVVCFDAKINFDDNAAFRQQEIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EED R++EA +H L+YI +DGNI C+VNGAGLAMATMDIIKL+GG PANFLD G
Sbjct: 260 AMRDTTEEDPRDVEADKHGLNYIGMDGNIACLVNGAGLAMATMDIIKLHGGEPANFLDCG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +D V +AFK++T D  V+ IL+NIFGGI+ C  +  GI+SA K V++ +PLV+RLE
Sbjct: 320 GGVTEDMVTSAFKLLTGDKQVEAILVNIFGGIVNCATIANGIVSACKNVELQVPLVVRLE 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+   +++ ESGL +ITA DLDD
Sbjct: 380 GTNVEKARQVLKESGLPIITATDLDD 405


>gi|149635784|ref|XP_001513628.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 464

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 170/398 (42%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G V  +   A S  + L     V+K+Q+ AGGRGKG F+
Sbjct: 54  LSLHEYLSMELLQEAGISVPSGQVAKTPEEAYSIAQKLGSKDVVLKAQVLAGGRGKGTFE 113

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 114 ---GGLKGGVKIVFSPEEAKKISSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 170

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 171 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIVKEPIDIMEGIKKEQAVRLAQKMGFP 230

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 231 ANLVDPAAENMMKLYNLFMKYDATMVEINPMVEDADGVVLCMDAKINFDSNSAYRQKKIF 290

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 291 DLQDWTQEDQRDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 350

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ I IP+V+RL+
Sbjct: 351 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDITIPIVVRLQ 410

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI  SGL ++   DLD+AA+ +V   + V
Sbjct: 411 GTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIV 448


>gi|82775996|ref|YP_402343.1| succinyl-CoA synthetase subunit beta [Shigella dysenteriae Sd197]
 gi|309786391|ref|ZP_07681017.1| succinyl-CoA synthetase beta chain [Shigella dysenteriae 1617]
 gi|123563189|sp|Q32IK3|SUCC_SHIDS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81240144|gb|ABB60854.1| succinyl-CoA synthetase, beta subunit [Shigella dysenteriae Sd197]
 gi|308925785|gb|EFP71266.1| succinyl-CoA synthetase beta chain [Shigella dysenteriae 1617]
          Length = 388

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    + VK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWGVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG 387


>gi|296481810|gb|DAA23925.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Bos
           taurus]
          Length = 463

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 ASIVDSAAENMIKLYDLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 447


>gi|37525386|ref|NP_928730.1| succinyl-CoA synthetase subunit beta [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|81419923|sp|Q7N6V5|SUCC_PHOLL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|36784813|emb|CAE13725.1| succinyl-CoA synthetase beta chain [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 388

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/396 (48%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPLIG  S     L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLIGPMSYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFTKIFLGLANLFLERDLALVEINPLVITTQGDLICLDGKLGADGNALFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +A+SGLN+I A  L DAA++ V AV+
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAKQAVAAVE 386


>gi|300715880|ref|YP_003740683.1| succinyl-CoA synthetase beta chain [Erwinia billingiae Eb661]
 gi|299061716|emb|CAX58832.1| Succinyl-CoA synthetase beta chain [Erwinia billingiae Eb661]
          Length = 388

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLTTYQTDANGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P  I ++ +DPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPHLIHQMALDPLTGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K++ D NAL+R  +++
Sbjct: 171 GKQVGQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLTADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMRDPSQEDAREAQAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDAVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLSDAAQRVVAAAEG 387


>gi|254560925|ref|YP_003068020.1| malate thiokinase, large subunit [Methylobacterium extorquens DM4]
 gi|254268203|emb|CAX24128.1| Malate thiokinase, large subunit [Methylobacterium extorquens DM4]
          Length = 390

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLDGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PL++RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESGL++ITA  L +AA+K V A  G
Sbjct: 351 GTNVDEGKKILAESGLDLITADTLTEAARKAVEACHG 387


>gi|171914561|ref|ZP_02930031.1| succinyl-CoA synthetase subunit beta [Verrucomicrobium spinosum DSM
           4136]
          Length = 395

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 205/395 (51%), Positives = 263/395 (66%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L  K+ V   KG V ++   A +A + + G   VVK+Q+HAGGRGKG F 
Sbjct: 1   MNIHEYQAKELFEKFGVATPKGKVAATAEEAGAAAREIGGTGLVVKAQVHAGGRGKGTF- 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V ++ +       ++LG TL+T QTGP G  V+ V +    DI +E Y 
Sbjct: 60  --TNGFKGGVHVINTAEEAQEIAGKMLGQTLVTHQTGPEGKLVSKVLIAKSVDIAKEHYF 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR+S   A IAST+GGM+IEEVA+  P+KI K  + P +G+ +     +   L L+
Sbjct: 118 AILFDRSSSRHAIIASTEGGMNIEEVAEKTPEKIIKEFVHPTLGLQAYQCRKIAAALGLR 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        LF  LYK +   D SL+E+NPL I  + ++  LD+K +FDDNALYR  DI 
Sbjct: 178 GALMTQAVKLFTALYKLYIQSDCSLVEVNPLAITTDNQVVALDAKFNFDDNALYRQKDIV 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED RE+ A +  LSYI LDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 238 TLRDTSEEDPREVAASEFGLSYIGLDGNIACLVNGAGLAMSTMDIIKFHGGEPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+VAAAFKII  D +VKGIL+NIFGGIM C+V+  GI++A +E  +++PLV+RLE
Sbjct: 298 GGASKDQVAAAFKIILGDPNVKGILVNIFGGIMDCNVIATGIIAAAQETGLSLPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G   +A SGL +  A DL DAAQKIV AV
Sbjct: 358 GNNVAAGKETLANSGLAITGADDLTDAAQKIVAAV 392


>gi|197284468|ref|YP_002150340.1| succinyl-CoA synthetase subunit beta [Proteus mirabilis HI4320]
 gi|227356646|ref|ZP_03841032.1| succinyl-CoA synthetase beta chain [Proteus mirabilis ATCC 29906]
 gi|226734973|sp|B4ESR1|SUCC_PROMH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|194681955|emb|CAR41369.1| succinyl-CoA synthetase beta chain [Proteus mirabilis HI4320]
 gi|227163154|gb|EEI48085.1| succinyl-CoA synthetase beta chain [Proteus mirabilis ATCC 29906]
          Length = 388

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFSRYGLPAPAGFACSTPREAEEAASKIGQGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDANGQPVTQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I + +IDPL G        L   L L+
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHRAIIDPLTGPMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K+  L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVSQFAKIFMGLATIFLERDLALIEINPLVITKDDDLICLDGKLGVDSNALFRQPEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V  +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +A+SGLN+I A  L DAA+++V A +
Sbjct: 351 GNNAELGTKKLADSGLNIIAAKSLTDAAKQVVAAAE 386


>gi|15642085|ref|NP_231717.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586911|ref|ZP_01676691.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 2740-80]
 gi|147673132|ref|YP_001217610.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae O395]
 gi|153801987|ref|ZP_01956573.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-3]
 gi|153818372|ref|ZP_01971039.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae NCTC 8457]
 gi|153821672|ref|ZP_01974339.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae B33]
 gi|153826084|ref|ZP_01978751.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-2]
 gi|153828883|ref|ZP_01981550.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 623-39]
 gi|227082211|ref|YP_002810762.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae M66-2]
 gi|229507826|ref|ZP_04397331.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae BX
           330286]
 gi|229511937|ref|ZP_04401416.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae B33]
 gi|229513740|ref|ZP_04403202.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TMA
           21]
 gi|229519073|ref|ZP_04408516.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC9]
 gi|229522042|ref|ZP_04411459.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TM
           11079-80]
 gi|229524091|ref|ZP_04413496.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae bv.
           albensis VL426]
 gi|229528899|ref|ZP_04418289.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           12129(1)]
 gi|229607371|ref|YP_002878019.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MJ-1236]
 gi|254226088|ref|ZP_04919686.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V51]
 gi|254286798|ref|ZP_04961751.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae AM-19226]
 gi|254849171|ref|ZP_05238521.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MO10]
 gi|255745172|ref|ZP_05419121.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholera CIRS
           101]
 gi|262155970|ref|ZP_06029091.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae INDRE
           91/1]
 gi|262167704|ref|ZP_06035407.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC27]
 gi|262191357|ref|ZP_06049548.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae CT
           5369-93]
 gi|297579589|ref|ZP_06941517.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae RC385]
 gi|298497889|ref|ZP_07007696.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MAK 757]
 gi|21264054|sp|Q9KQB5|SUCC_VIBCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189030225|sp|A5F6G6|SUCC_VIBC3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778454|sp|C3LP35|SUCC_VIBCM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|9656633|gb|AAF95231.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548847|gb|EAX58890.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 2740-80]
 gi|124122501|gb|EAY41244.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-3]
 gi|125621400|gb|EAZ49736.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V51]
 gi|126511062|gb|EAZ73656.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae NCTC 8457]
 gi|126520770|gb|EAZ77993.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae B33]
 gi|146315015|gb|ABQ19554.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae O395]
 gi|148875589|gb|EDL73724.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae 623-39]
 gi|149740201|gb|EDM54354.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae MZO-2]
 gi|150423089|gb|EDN15037.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae AM-19226]
 gi|227010099|gb|ACP06311.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae M66-2]
 gi|227013982|gb|ACP10192.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae O395]
 gi|229332673|gb|EEN98159.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           12129(1)]
 gi|229337672|gb|EEO02689.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae bv.
           albensis VL426]
 gi|229340967|gb|EEO05972.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TM
           11079-80]
 gi|229343762|gb|EEO08737.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC9]
 gi|229348921|gb|EEO13878.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae TMA
           21]
 gi|229351902|gb|EEO16843.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae B33]
 gi|229355331|gb|EEO20252.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae BX
           330286]
 gi|229370026|gb|ACQ60449.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           MJ-1236]
 gi|254844876|gb|EET23290.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MO10]
 gi|255737002|gb|EET92398.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholera CIRS
           101]
 gi|262023909|gb|EEY42607.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae RC27]
 gi|262030281|gb|EEY48924.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae INDRE
           91/1]
 gi|262032776|gb|EEY51323.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae CT
           5369-93]
 gi|297537183|gb|EFH76016.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae RC385]
 gi|297542222|gb|EFH78272.1| succinyl-CoA synthetase subunit beta [Vibrio cholerae MAK 757]
 gi|327484617|gb|AEA79024.1| Succinyl-CoA ligase [ADP-forming] beta chain [Vibrio cholerae
           LMA3894-4]
          Length = 388

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 QMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|171464130|ref|YP_001798243.1| succinyl-CoA synthetase, beta subunit [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|226734971|sp|B1XRZ4|SUCC_POLNS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|171193668|gb|ACB44629.1| succinyl-CoA synthetase, beta subunit [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 389

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/386 (49%), Positives = 266/386 (68%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LLR++NVPV  G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L T QTGP G +VN + +EDGADI +E Y 
Sbjct: 52  -GGRGKGGGVKLAKSMDEVKRYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +     +AS++GGMDIEEVA+ +P+KI K+ +DP++G+T  D   +   + + 
Sbjct: 111 SIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIIAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F NLYK + D D SL+EINPLI+  NG+++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDIDEEDAAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDAIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +V+ IL+NIFGGIMRCDV+  G+++A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKNVQAILVNIFGGIMRCDVIADGVVTACKVVNLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G +++A+SGL +I+   + +
Sbjct: 351 GTNEELGKKILADSGLPIISTDSMTE 376


>gi|157375947|ref|YP_001474547.1| succinyl-CoA synthetase subunit beta [Shewanella sediminis HAW-EB3]
 gi|189030210|sp|A8FX46|SUCC_SHESH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157318321|gb|ABV37419.1| Succinate--CoA ligase (ADP-forming) [Shewanella sediminis HAW-EB3]
          Length = 388

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTPQEAVEAAGRIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQEKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNADLGRDVLASSDLDIIAATSLTDAAEQVVKAAEG 387


>gi|148266009|ref|YP_001232715.1| succinyl-CoA synthetase subunit beta [Geobacter uraniireducens Rf4]
 gi|146399509|gb|ABQ28142.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Geobacter
           uraniireducens Rf4]
          Length = 387

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 186/395 (47%), Positives = 257/395 (65%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + +PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSSFGIPVPRGRVALTSDQVERAAKEMGG-RCVVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +++    L+T QTGP G RV  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQELGKDLFTRKLVTPQTGPEGLRVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR S     IAS +GG++IEEVA+  P+KI  L IDP  G+       +   L L 
Sbjct: 110 SITLDRESSRYCLIASAEGGVEIEEVAQKSPEKIHMLTIDPFTGLRPYQARKIALALGLA 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  NLY+   +KD  L+EINPL++ + G L  +D+KI+FDDNA++RH +  
Sbjct: 170 GSVCEDCVELILNLYRLCLEKDCYLVEINPLVVTRAGWLMAMDAKINFDDNAMFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D+ EI A +++LSYI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMLDYSQLDTLEINAGKYDLSYIKLQGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VKG+ +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKGVFVNIFGGIMRCDVIAQGIIEAASEVHCALPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G+ V+ G +L+ +SGLNV    +L D A +IV  +
Sbjct: 350 GSKVEEGKKLLLDSGLNVQIGENLGDGAARIVQML 384


>gi|82700691|ref|YP_415265.1| succinyl-CoA synthetase subunit beta [Brucella melitensis biovar
           Abortus 2308]
 gi|82616792|emb|CAJ11882.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
           synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
           l [Brucella melitensis biovar Abortus 2308]
          Length = 376

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 255/374 (68%), Positives = 317/374 (84%)

Query: 24  VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI 83
            + SV  AE   KTLPGPLYVVKSQIHAGGRGKG+FKELPAD+KGGVR+  S++ V+++ 
Sbjct: 2   AVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANA 61

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           +E+LG+TL+TKQTG  G +VN +Y+EDGADI RELYLS+L+DR+ G  AF+ ST+GGMDI
Sbjct: 62  KEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDI 121

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           E VA++ P+KI  + IDP  GVT ED   L D L+L+G AR DG  LFP LYKAF +KDM
Sbjct: 122 EAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDM 181

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           SLLEINPLI+M NGR+RVLD+K+SFD+NAL+RH DI ELRD++EED +EIEA +++L+Y+
Sbjct: 182 SLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYV 241

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
           ALDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVGGGA ++KV AAFKIIT+D +V+G
Sbjct: 242 ALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVEG 301

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLEG NV++G ++I ESGLNVI+A D
Sbjct: 302 ILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADD 361

Query: 384 LDDAAQKIVHAVKG 397
           LDDAAQKIV AVKG
Sbjct: 362 LDDAAQKIVAAVKG 375


>gi|239993691|ref|ZP_04714215.1| succinyl-CoA synthetase subunit beta [Alteromonas macleodii ATCC
           27126]
          Length = 388

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEYGLPVSEGYAADTAQGAVEAADRIGGNEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +     LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKNKDDIRAFAENWLGKNLVTFQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G        +   L L 
Sbjct: 111 GAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPYQAREMAFALGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  D NALYR   ++
Sbjct: 171 GVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGIDGNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D S+ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMQDPSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNAELGREVLANSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|114649579|ref|XP_509774.2| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit isoform
           5 [Pan troglodytes]
          Length = 446

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 96  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 153 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 213 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 393 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 430


>gi|55957259|emb|CAI15153.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
          Length = 441

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 31  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 91  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 148 AITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 425


>gi|114571358|ref|YP_758038.1| succinyl-CoA synthetase subunit beta [Maricaulis maris MCS10]
 gi|122315054|sp|Q0AKU3|SUCC_MARMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114341820|gb|ABI67100.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Maricaulis
           maris MCS10]
          Length = 399

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 261/396 (65%), Positives = 322/396 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAKA+L+ +  PVA+GV I S   A +A   LPGPL+VVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEHQAKAVLKSFGAPVAEGVAIFSADEAAAAADQLPGPLWVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL +D+KGGVR+  S + V+ + +E+LG+TL+T QTGP G RVN +Y+EDGADI  ELY 
Sbjct: 61  ELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKRVNRLYIEDGADIATELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLV+R +G VAF+ ST+GGMDIEEVA + P+KI  + IDP  GVT    A++CD L+L+
Sbjct: 121 SLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPSTGVTDASAAAVCDALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR D   L   LY AFC+KDMS+LEINPLI+M NG +RVLD+K+SFD NAL+RH DI 
Sbjct: 181 GQAREDMMGLAKILYTAFCEKDMSMLEINPLIVMDNGHVRVLDAKVSFDGNALFRHPDIM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDTTEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIIT+D +VKGIL+NIFGGIMRCDV+ +G+++AVK+V + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKDVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G ++I ESGLNVI A DLDDAAQKIV AVK
Sbjct: 361 GTNVAKGKQIINESGLNVIAADDLDDAAQKIVAAVK 396


>gi|258626223|ref|ZP_05721071.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM603]
 gi|258581578|gb|EEW06479.1| succinyl-CoA synthetase subunit beta [Vibrio mimicus VM603]
          Length = 388

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKNGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 351 GTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 387


>gi|126327699|ref|XP_001378919.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 438

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 252/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 28  LSLHEYLSMELLQEAGISVPKGQVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGIFE 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 88  ---SGLKGGVKIVFSPEEAKAVSAQMIGKKLFTKQTGEKGRICNNVLVCERRYPRREYYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++RT      I S QGG++IE+VA + P+ IFK  ID + G+  E    L   +   
Sbjct: 145 AITMERTFQGPVLIGSAQGGVNIEDVAAENPEAIFKEPIDIVDGIKKEQAVRLAQKMGFP 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D    LY+ F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 205 SSLVDSAADNMVKLYELFLKYDATMVEINPMVEDADGGVLCMDAKINFDSNSSYRQKKIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 265 DLQDWTQEDERDKDAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK++ I IP+V+RL+
Sbjct: 325 GGATVNQVTQAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLDIKIPIVVRLQ 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 385 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 422


>gi|294339387|emb|CAZ87743.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Thiomonas sp. 3As]
          Length = 387

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 187/386 (48%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR++ VPV +G    SV  A +A + L GP+++VK+QIHA         
Sbjct: 1   MKIHEYQAKQLLREHGVPVPRGKPAFSVDEAVAAAQELGGPVWMVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G +V  + +EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARTLDEVRQLSLQILGMQLVTHQTGPAGQKVRRLLIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+       L   + + 
Sbjct: 111 AVLTDRATQKVAVMASSEGGMDIEEVAAKTPEKILKVFVDPLVGLQDAQGLELAAGIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             ++    D+F  LY+ + D D SL+EINPLI+  NG+++ LD+K + DDNAL+RH +I+
Sbjct: 171 LASQAQAIDVFKKLYQCYMDTDASLVEINPLILEGNGQIKALDAKFNIDDNALFRHPEIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E++A + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG+PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVQAHKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCD + +G+++A + V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLHNPHVKAILVNIFGGIMRCDTIAEGVIAASRTVGLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N +IG +++A+SGL +I+A  + +
Sbjct: 351 GTNEEIGRKMLADSGLPIISANTMGE 376


>gi|290993522|ref|XP_002679382.1| succinate-CoA ligase (ADP-forming) [Naegleria gruberi]
 gi|284092998|gb|EFC46638.1| succinate-CoA ligase (ADP-forming) [Naegleria gruberi]
          Length = 441

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 182/396 (45%), Positives = 261/396 (65%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-YVVKSQIHAGGRGKGRF 59
           +N+HEYQA+ L R Y++ V +G V++S    + A   L   + Y+VK+Q+ AGGRG+G+F
Sbjct: 31  LNLHEYQAQDLFRSYDISVPRGKVLTSATETKKACTELGNHVDYIVKAQVLAGGRGRGKF 90

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           K   +  KGGV+   S+      + ++LG  L+TKQTG  G   N VYV++     RELY
Sbjct: 91  K---SGLKGGVQKALSIGEAEDYVSKMLGQVLVTKQTGAEGKPCNKVYVQERLYARRELY 147

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++L+DR SG    I STQGGM IE+VA++ P++I  + I    G+       L   L  
Sbjct: 148 LAILLDRQSGGPVLIGSTQGGMAIEDVARESPEEIHTIPISVKEGLHKSQAEGLARKLGF 207

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +      D    LY  F   D  LLEINPLI   +G++   D+K++ DDNA +R  ++
Sbjct: 208 RDELLDQAVDQITKLYNLFMKTDSVLLEINPLIETADGKVICADAKVNIDDNAFFRQKEL 267

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D+++ED R++ A +++L+YI LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 268 FALKDITQEDPRDVRAAKYDLNYIGLDGNIGCIVNGAGLAMATMDIIKLYGGDPANFLDV 327

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA QD++  A KI+  D  V+ IL+NIFGGIMRCD++ +G+++A+KE ++  P+V+RL
Sbjct: 328 GGGASQDQIVEALKILNDDHHVQAILVNIFGGIMRCDLIAQGLINAMKETELRAPVVVRL 387

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +G NV     ++A+SG+ VI A +L+DAAQK V   
Sbjct: 388 QGTNVQQAKDILAKSGIRVIPADNLEDAAQKAVKIA 423


>gi|300692431|ref|YP_003753426.1| succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum PSI07]
 gi|299079491|emb|CBJ52167.1| Succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum PSI07]
          Length = 388

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 197/386 (51%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR S  VA +AS++GGMDIEEVA   P+KI  L++DP  G+   D   +   + + 
Sbjct: 111 SMVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPEFGLQDADADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF D D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWDTDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAASKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMEE 376


>gi|114563512|ref|YP_751025.1| succinyl-CoA synthetase subunit beta [Shewanella frigidimarina
           NCIMB 400]
 gi|122299478|sp|Q080X8|SUCC_SHEFN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114334805|gb|ABI72187.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           frigidimarina NCIMB 400]
          Length = 388

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGNKDEIRAFAENWLGKNLVTYQTDAKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG+DIE VA+  P+ I   +IDPL G  +     L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVDIETVAEHTPELIHTAIIDPLTGPQAFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLANMFNDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEG 387


>gi|222053863|ref|YP_002536225.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
 gi|221563152|gb|ACM19124.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. FRC-32]
          Length = 390

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 180/396 (45%), Positives = 256/396 (64%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  + + V +G V  +    E A K + G   +VK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILGSFGIAVPRGRVALTSDQVERAAKEMGG-RCIVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +++ G  L+T QTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQAQELAKDLFGRKLVTPQTGPQGLKVRRILVEEAVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GG++IEEVA+  P+KI  L IDP  G+       +   L L+
Sbjct: 110 SITLDRETSRYCLIASAEGGVEIEEVAQKSPEKIHILTIDPFTGLRPYQARKIALALGLK 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  DL  NLY+   ++D  L+EINPL+I K G L  +D+K++FDDN+++RH +  
Sbjct: 170 GSICEDCVDLILNLYRCCTERDCFLVEINPLVITKAGWLMAMDAKVNFDDNSMFRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D S+ D  EI A + +LSYI L GNIGCMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 230 DMQDYSQLDPLEITAGKFDLSYIKLQGNIGCMVNGAGLAMATLDVLKESGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKII  D+ VKG+ +NIFGGIMRCD++ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVTEAFKIILQDADVKGVFVNIFGGIMRCDIIAQGIIEAASEVHCALPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G+ V+ G +L+ +SGLNV    +L D A +IV  ++
Sbjct: 350 GSKVEEGKKLLMQSGLNVQIGNNLGDGATRIVQMLQ 385


>gi|322833841|ref|YP_004213868.1| succinyl-CoA synthetase subunit beta [Rahnella sp. Y9602]
 gi|321169042|gb|ADW74741.1| succinyl-CoA synthetase, beta subunit [Rahnella sp. Y9602]
          Length = 388

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   S+   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFLRYGLPAPTGFACSTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT  +G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDASGQPVNQILVEAATDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLAGPQPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL++   G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVQQFTKIFMGLANIFLERDLALIEINPLVVTTAGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDYSQEDARESQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L +AAQ++V AV+G
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTNAAQQVVAAVEG 387


>gi|90421033|ref|ZP_01228936.1| succinyl-CoA synthetase, beta subunit [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334668|gb|EAS48445.1| succinyl-CoA synthetase, beta subunit [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 396

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 266/395 (67%), Positives = 323/395 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA GV I+ V  AE+A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKEVLKGFGAPVASGVPITQVSEAEAAARQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+    E+LG+TL+T QTG  G +VN +Y+EDGADI RELYL
Sbjct: 61  ELGPDAKGGVRLAKSVEEVVQHATEMLGNTLVTAQTGDAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR  G VAF+AST+GGMDIE VA + P+KI  + IDPL GVT  D   LCD LEL 
Sbjct: 121 SILVDRAVGRVAFVASTEGGMDIETVAHETPEKIITVAIDPLEGVTEADAGKLCDALELD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQAR DG  LFP LYKAF +KDMSLLEINPLI+M +GRLRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GQARTDGMSLFPILYKAFTEKDMSLLEINPLIVMTDGRLRVLDAKVSFDGNALFRHDDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED++EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ALRDESEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGKEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+ KV AAFKIIT+D +VKGIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGADKAKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G  ++ +SGL +  A DLDDAA+KIV AV
Sbjct: 361 GTNVDKGKAILNDSGLAITAADDLDDAAKKIVAAV 395


>gi|332526156|ref|ZP_08402291.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
 gi|332109996|gb|EGJ10624.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
          Length = 386

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR + VPV +G    +V  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRAHGVPVPRGYAAFTVQEALEAAQKLGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L+T QTGP G +V  + VE+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLAEVETLASQILGMQLVTHQTGPEGQKVRRLLVEEGADIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+T      L   + + 
Sbjct: 111 AALTDRATQKVALMASSEGGMDIEEVAHATPEKILKVFVDPLVGLTEAQARELAVGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             ++    D+F  LY  +   D SL EINPLI+  +G ++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASQAQAVDVFQKLYACYMASDASLAEINPLILEGHGGIKALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K V + +PLV+R++
Sbjct: 291 GGASAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIAEGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++A+SGL +I A  + +AA  IV AV+
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMAEAATAIVKAVQ 386


>gi|332141299|ref|YP_004427037.1| succinyl-CoA synthetase subunit beta [Alteromonas macleodii str.
           'Deep ecotype']
 gi|226734920|sp|B4RYG2|SUCC_ALTMD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|327551321|gb|AEA98039.1| succinyl-CoA synthetase subunit beta [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 388

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEYGLPVSEGYAADTAQGAVEAADRIGGEEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +     LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKNKDDIRAFAENWLGKNLVTFQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G        +   L L 
Sbjct: 111 GAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPYQAREMAFALGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  D NALYR   ++
Sbjct: 171 GVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGIDGNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D S+ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMQDPSQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNAELGREVLANSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|255261379|ref|ZP_05340721.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
 gi|255103714|gb|EET46388.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
          Length = 396

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 169/397 (42%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVEIPAGALAYSPEQAAYRAREMGGEKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   + +   ++ G  L+T QTG  G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCDTDHEIQATCEDMFGKKLVTHQTGLEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT+  +  +AS +GGM+IEE++++ P+ I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRTTQRIMIVASAEGGMEIEEISENKPESIVRSTVEPAVGLRDFQARDIAFKLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D +++EINPL+I  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PSLTQSMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDDNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+G+IGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLEGSIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ +L+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPIIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +++A+SGL +I A  L +AA++ V A K 
Sbjct: 351 GTNVEEGQKILAKSGLPIIRATTLMEAAERSVSAWKS 387


>gi|7023369|dbj|BAA91939.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 173/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ + K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAVIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 447


>gi|291408934|ref|XP_002720765.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit
           [Oryctolagus cuniculus]
          Length = 463

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGFVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V + +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLICERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 170 AIAMERSFQGPVLIGSSQGGVNIEDVAAETPDAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    L+  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVDSAAENMVKLFNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 447


>gi|189425773|ref|YP_001952950.1| succinyl-CoA synthetase subunit beta [Geobacter lovleyi SZ]
 gi|226734956|sp|B3E7B3|SUCC_GEOLS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189422032|gb|ACD96430.1| succinyl-CoA synthetase, beta subunit [Geobacter lovleyi SZ]
          Length = 387

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 194/395 (49%), Positives = 258/395 (65%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  Y +PV +  V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MNIHEYQAKEILSTYGIPVPRNRVALTADQVERAAKMMGGHC-VVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +      +E+ G  L+TKQTGP G +V  + VE+  +I RE YL
Sbjct: 57  -------GGVKLVHHPEQASDVAKELFGKRLVTKQTGPEGLKVRRILVEETVEIAREFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GGMDIEEVA+  P KI  L IDP  G+ +     +   L L 
Sbjct: 110 SITLDRETSRYCLIASAEGGMDIEEVAQKSPDKIHVLTIDPFTGLRTYQARKIALALGLS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D  +L  N YK   +KD SL+EINPL++ + G L  +D+KISFDDNA+YRH +  
Sbjct: 170 GAVCEDCVELILNTYKCCLEKDCSLIEINPLVVTRAGWLLAMDAKISFDDNAVYRHREYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D  EI A +++L+YI L GNIGCMVNGAGLAMAT+D++K +GG PANFLDVG
Sbjct: 230 DMVDYSQLDPLEITAGKYDLAYIKLTGNIGCMVNGAGLAMATLDVLKEFGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  DS VK + +NIFGGIMRCDV+ +GI+ A  EV   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDSDVKAVFVNIFGGIMRCDVIAQGIIEAANEVHCPLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G+NV+ G +L+ ESGLNV    +L D AQKIV  +
Sbjct: 350 GSNVEDGKKLLLESGLNVQIGDNLGDGAQKIVAML 384


>gi|3766197|gb|AAC64396.1| ATP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
          Length = 426

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 16  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 76  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 132

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 133 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 192

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 193 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 252

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 253 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 312

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 313 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 372

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 373 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 410


>gi|197098544|ref|NP_001124678.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Pongo abelii]
 gi|55725384|emb|CAH89556.1| hypothetical protein [Pongo abelii]
 gi|55731598|emb|CAH92506.1| hypothetical protein [Pongo abelii]
          Length = 463

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 173/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALHLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PTIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 447


>gi|227823644|ref|YP_002827617.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium fredii NGR234]
 gi|227342646|gb|ACP26864.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium fredii NGR234]
          Length = 397

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 260/397 (65%), Positives = 327/397 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I S   A++A + LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKSYGAPVAEGVAIFSADEAKAAARKLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVR+  S+    +  +E+LG+TL+T QTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELSADAKGGVRLAFSIDEAQAHAKEMLGNTLVTAQTGPAGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G +AF+ ST+GGMDIE VA D P+KI  + I+P  GVT+ D+A L   L+L+
Sbjct: 121 SLLVDRSVGQIAFVVSTEGGMDIEAVAHDTPEKIVNVAINPEAGVTAADLAKLTSALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A+ D   LFP LYKAF +KDMSLLEINPLI+MKNGR+RVLD+K+SFD NAL+RH DI+
Sbjct: 181 GEAKADAEKLFPILYKAFVEKDMSLLEINPLIVMKNGRMRVLDAKVSFDGNALFRHDDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AV+EV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAVQEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|85110202|ref|XP_963313.1| succinyl-CoA ligase beta-chain [Neurospora crassa OR74A]
 gi|21264057|sp|Q9P567|SUCB_NEUCR RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
           beta, mitochondrial; AltName: Full=Succinyl-CoA
           synthetase beta chain; Short=SCS-beta; Flags: Precursor
 gi|7981341|emb|CAB92021.1| probable beta-succinyl CoA synthetase precursor [Neurospora crassa]
 gi|28924988|gb|EAA34077.1| succinyl-CoA ligase beta-chain [Neurospora crassa OR74A]
          Length = 447

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 180/398 (45%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V KG V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGIGVPKGDVARTGAEAEAIAKQIGGEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   + VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 154 AVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK FC+KD + +EINPL    + ++  +D+K  FDDNA +R  DI 
Sbjct: 214 EQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADFRQPDIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED  E+ A Q  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 KLRDTTQEDPDEVRAAQAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + IP++ RL+
Sbjct: 334 GGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI +SG+ + +  DL  AA+K V   K V
Sbjct: 394 GTNMEAARQLINDSGMKIFSIDDLQSAAEKSVQLSKVV 431


>gi|71281693|ref|YP_268946.1| succinyl-CoA synthetase subunit beta [Colwellia psychrerythraea
           34H]
 gi|123632656|sp|Q482S1|SUCC_COLP3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71147433|gb|AAZ27906.1| succinyl-CoA synthase, beta subunit [Colwellia psychrerythraea 34H]
          Length = 388

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 254/397 (63%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A  A   + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSEGFACDTPQEAAEAADKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +    +  LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSKEEIKEFAQHWLGKNLVTYQTDANGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE++A++ P+ I +  IDPL+G        L   L L 
Sbjct: 111 GAVVDRASQRVVFMASTEGGVDIEKIAEETPELIHQAEIDPLVGAQPYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI  D NA+YR   ++
Sbjct: 171 PTQMKQFVKIFMGLAKMFEDCDFALLEINPLVITDEGNLHCLDGKIGIDGNAIYRQPKMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S+ED RE  A Q  L+Y+ALDG +GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AFHDPSQEDEREAHAAQWELNYVALDGTVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGANKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++  SGL++I A  L DAA K+V A +G
Sbjct: 351 GTNAELGREVLKNSGLDIIAAESLTDAATKVVAAAEG 387


>gi|104782658|ref|YP_609156.1| succinyl-CoA synthetase subunit beta [Pseudomonas entomophila L48]
 gi|170722673|ref|YP_001750361.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida W619]
 gi|122402609|sp|Q1I7L3|SUCC_PSEE4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734975|sp|B1JAV3|SUCC_PSEPW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|95111645|emb|CAK16366.1| succinyl-CoA synthetase beta chain [Pseudomonas entomophila L48]
 gi|169760676|gb|ACA73992.1| succinyl-CoA synthetase, beta subunit [Pseudomonas putida W619]
          Length = 388

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D+RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|294141504|ref|YP_003557482.1| succinyl-CoA synthase subunit beta [Shewanella violacea DSS12]
 gi|293327973|dbj|BAJ02704.1| succinyl-CoA synthase, beta subunit [Shewanella violacea DSS12]
          Length = 388

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S   + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGSKDEIRAFAEHWLGKNLVTYQTDAKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG+DIE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVDIETVAENTPELIHKAIIDPLTGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITTEGNIHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A S L++I A  L DAAQ++V A +G
Sbjct: 351 GTNAELGREVLAGSDLDIIAATSLTDAAQQVVKAAEG 387


>gi|307946997|ref|ZP_07662332.1| malate--CoA ligase subunit beta [Roseibium sp. TrichSKD4]
 gi|307770661|gb|EFO29887.1| malate--CoA ligase subunit beta [Roseibium sp. TrichSKD4]
          Length = 398

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 171/397 (43%), Positives = 254/397 (63%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V +  G +  S   A    + + G  ++VK+QIHAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVEIPAGALAYSPEQAAYRAREMGGEKWIVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +  + + +    + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCADDQEIQAACEAMFGRKLVTHQTGPEGKGIYRVYVEAAVPIDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRTS  +  +AS +GGM+IE+++ + P  I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRTSQRIMIVASAEGGMEIEDISAEKPDSIVRSTVEPAVGLRDFQAREIAFKLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D +++EINPL+I  + R+  LD+K++FD NAL+RH  I 
Sbjct: 171 PGLTQSMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDGNALFRHPQIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +V+ +L+NIF GI RCD + +G++ A+KEV++++P+++RL 
Sbjct: 291 GGATPERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPVIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G +++A+SGL +I A  L +AA++ V A K 
Sbjct: 351 GTNVEEGQKILAKSGLPIIRATTLMEAAERSVSAWKS 387


>gi|257092290|ref|YP_003165931.1| succinyl-CoA synthetase subunit beta [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044814|gb|ACV34002.1| succinyl-CoA synthetase, beta subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 386

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 193/395 (48%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+K+ V V +GV   SV  A  A +TL G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKKFGVVVPRGVFCPSVDDAVKAAETLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +V  + VE+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRQFAGQILGMQLVTHQTGPAGQKVRRLLVEEGADIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DRT+  V  +AS++GGMDIE+VA D P+KI K+ IDP+ G++    A L + + + 
Sbjct: 111 AALTDRTTQKVVMMASSEGGMDIEKVAHDTPEKILKVFIDPVDGISDAQAAELANGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY+ + + D SL EINPLI+  NG ++ +D+K +FD N+LYR  +I 
Sbjct: 171 AESVGQAVAALKGLYQCYMETDASLAEINPLILEGNGNIKAIDAKFNFDSNSLYRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AYRDLDEEDPDELEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AF+I+  +  VKGIL+NIFGGIMRCD +  G+++A +E  +++PLV+R++
Sbjct: 291 GGATTEKVTEAFQIMLRNPKVKGILVNIFGGIMRCDTIATGVVAAARETHLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N DIG +++++SGL +ITA  + +AA KIV AV
Sbjct: 351 GTNEDIGKKILSDSGLPIITADSMAEAATKIVAAV 385


>gi|113866575|ref|YP_725064.1| succinyl-CoA synthetase subunit beta [Ralstonia eutropha H16]
 gi|123134400|sp|Q0KE75|SUCC_RALEH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|113525351|emb|CAJ91696.1| Succinyl-CoA synthetase beta chain [Ralstonia eutropha H16]
          Length = 388

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 197/386 (51%), Positives = 271/386 (70%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKTYASNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA   P+KI  L+I+P +G+T  +   +   + + 
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHSPEKIHTLIIEPSVGLTDAEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DTSVAQARQALQGLYKAFYETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++ S+ +V+ IL+NIFGGIMRCDV+ +G++SA K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLSNKNVQAILVNIFGGIMRCDVIAEGVISASKAVHLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADTMEE 376


>gi|119774566|ref|YP_927306.1| succinyl-CoA synthetase subunit beta [Shewanella amazonensis SB2B]
 gi|189081798|sp|A1S5I0|SUCC_SHEAM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119767066|gb|ABL99636.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           amazonensis SB2B]
          Length = 388

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGRIGGNMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +   + LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEKWLGKNLVTYQTDENGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDP+ G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPIAGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L + F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLAQMFLDHDFALLEINPLVITTEGNLHCLDGKIGVDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGL++I A  L DAAQ++V A +G
Sbjct: 351 GTNAELGAKVLAESGLDIIAAKSLTDAAQQVVKAAEG 387


>gi|253990446|ref|YP_003041802.1| succinyl-CoA synthetase subunit beta [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211638987|emb|CAR67602.1| succinyl-coa synthetase, beta subunit (ec 6.2.1.5) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781896|emb|CAQ85060.1| succinyl-CoA synthetase, beta subunit [Photorhabdus asymbiotica]
          Length = 388

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/395 (48%), Positives = 263/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDAQGQPVHQILVEGATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLAGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQISQFTKIFLGLANLFLERDLALVEINPLVITTQGDLICLDGKLGADGNALFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G + +A+SGLN+I A  L DAA++ V AV
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLTDAAKQAVAAV 385


>gi|58584777|ref|YP_198350.1| succinyl-CoA synthetase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|75497787|sp|Q5GSB6|SUCC_WOLTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58419093|gb|AAW71108.1| Succinyl-CoA synthetase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 386

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 214/396 (54%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NVPV KG V  S   AE+ I  L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILHKFNVPVPKGFVAMSAEEAETKINQLKSDVLVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +     ++ +LG TL+T QTGP G +V  VY+E+G+ I +E YL
Sbjct: 58  -------GGVKLAKSAEEAQQFVKGMLGITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++D      AFI S++GGMDIEEVAK++P KI KL ID      S D   L ++  L 
Sbjct: 111 SIVIDPKLSRPAFIFSSEGGMDIEEVAKNFPTKIVKLDIDYAADFASFDSRKLSNIFNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  N+Y  F   D + +EINPL+   +G    LD+KISFDDNALYRH +I 
Sbjct: 171 PEQIEKITNVAKNIYDTFIATDANQIEINPLVETNSGDFIALDAKISFDDNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI+ A K + I +PLV+RL 
Sbjct: 291 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVEAAKGMSIKVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G R++ ESGLN+I A +LD+AAQKIV  V+
Sbjct: 351 GTNFEKGKRILEESGLNIIAADELDEAAQKIVKEVE 386


>gi|158749584|ref|NP_001101857.2| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Rattus norvegicus]
          Length = 465

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 55  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 113

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 114 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGAKGRICNQVLVCERKYPRREYYF 171

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  +D + GV  E   +L   +   
Sbjct: 172 AITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVKEPVDIIEGVKKEQAVTLAKKMGFP 231

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 232 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVLCMDAKINFDSNSAYRQKKIF 291

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED R+ +A   +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 292 ALQDWSQEDERDKDAADADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 351

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCD++ +GI+ AVK+++I IP+V+RL+
Sbjct: 352 GGATVHQVTEAFKLITSDKRVQAILVNIFGGIMRCDIIAQGIVMAVKDLEIRIPVVVRLQ 411

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 412 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 449


>gi|26990878|ref|NP_746303.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida KT2440]
 gi|148546906|ref|YP_001267008.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida F1]
 gi|325275365|ref|ZP_08141313.1| succinyl-CoA synthetase subunit beta [Pseudomonas sp. TJI-51]
 gi|81439975|sp|Q88FB2|SUCC_PSEPK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081771|sp|A5W114|SUCC_PSEP1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|24985891|gb|AAN69767.1|AE016613_2 succinyl-CoA synthetase, beta subunit [Pseudomonas putida KT2440]
 gi|148510964|gb|ABQ77824.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pseudomonas
           putida F1]
 gi|313497968|gb|ADR59334.1| SucC [Pseudomonas putida BIRD-1]
 gi|324099509|gb|EGB97407.1| succinyl-CoA synthetase subunit beta [Pseudomonas sp. TJI-51]
          Length = 388

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEQAAEACDKIGGNEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAAQWLGKNLVTYQTDANGQPVSKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVQQFAKIFVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D+RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDAREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|74151797|dbj|BAE29687.1| unnamed protein product [Mus musculus]
          Length = 470

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 60  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 118

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 119 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 176

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 177 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 236

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 237 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 296

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 297 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 356

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 357 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 417 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 454


>gi|75075886|sp|Q4R517|SUCB1_MACFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|67970932|dbj|BAE01808.1| unnamed protein product [Macaca fascicularis]
          Length = 463

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I    ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A Q NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIM CDV+ +GI++A+K+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMSCDVIAQGIVTALKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMVVKLSEIV 447


>gi|254420526|ref|ZP_05034250.1| succinyl-CoA synthetase, beta subunit subfamily [Brevundimonas sp.
           BAL3]
 gi|196186703|gb|EDX81679.1| succinyl-CoA synthetase, beta subunit subfamily [Brevundimonas sp.
           BAL3]
          Length = 396

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 257/395 (65%), Positives = 324/395 (82%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA+GV I+S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGFGAPVAEGVPITSADQAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++ V+ + +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELPADAKGGVRLAFSIEDVVKNAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G VAF+ ST+GGMDIE VA D P+KI  ++IDP  GVT  DVA++     L 
Sbjct: 121 SLLVDRQYGRVAFVVSTEGGMDIEAVAHDTPEKIQTIVIDPATGVTEADVAAINAAYGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDM++LE+NPLI+M+NGRLRVLD+K+SFD NAL+RH D++
Sbjct: 181 GDAAEDGKSLFPALYKAFVEKDMAMLEVNPLIVMENGRLRVLDAKVSFDGNALFRHEDMR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVSLDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPNVQGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G +++ ESGL +  A DLDDAAQKIV AV
Sbjct: 361 GTNAELGKKILNESGLTIQAADDLDDAAQKIVAAV 395


>gi|257464603|ref|ZP_05628974.1| succinyl-CoA synthetase subunit beta [Actinobacillus minor 202]
 gi|257450263|gb|EEV24306.1| succinyl-CoA synthetase subunit beta [Actinobacillus minor 202]
          Length = 389

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 183/396 (46%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y++PV++G+   S     +A+K L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYHLPVSQGIACQSADETVNALKRLNGEVWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +     LG+ L+T QT   G  VN +Y+E+   I  ELYL
Sbjct: 58  -------GGVKLVHNEQEARAFADYWLGNRLVTFQTDSRGQPVNTIYIEETCQIAHELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA+  P+ I K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRSSQKVIFMASSAGGMNIEEVAEKTPELIHKVALDPLVGGQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F +KD++LLE+NPL++ + G+L  LD+K+  D NALYRH ++ 
Sbjct: 171 NDEVKQFSHIFVQLSKLFIEKDLALLEVNPLVVTQQGQLICLDAKMVIDSNALYRHPELL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDPREAEAAKWQLNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV + +P+V+RLE
Sbjct: 291 GGTTKERVAEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVQVPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A+SGL+++ A  L +AA   V A +
Sbjct: 351 GTNAELGREILAKSGLSLLVANTLKEAAILAVKAAQ 386


>gi|301156158|emb|CBW15629.1| succinyl-CoA synthetase, beta subunit [Haemophilus parainfluenzae
           T3T1]
          Length = 388

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L ++Y++PV++GVV  +   AE A+  L G +++ K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFKQYDLPVSEGVVCQTADEAEMALFQLNGDVWIAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +   + LG  L+T QT   G  VN +Y+E+   I +ELYL
Sbjct: 58  -------GGVKLVHNTEEARAFADKWLGQHLVTFQTDKKGQPVNSIYIEETCQIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS+ GGM+IE+VA++ P+ I K+ IDPL+G        L   L L 
Sbjct: 111 GAVIDRASQKVVFMASSAGGMNIEDVARETPELIHKVAIDPLVGGMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L + F +KD SL+E+NPL++ K G L  LD+K+  DDN+LYRH D+ 
Sbjct: 171 GEQNKQFAAIFVKLSQLFIEKDFSLVEVNPLVVTKEGNLICLDAKVGIDDNSLYRHPDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+S+ DSRE EA+++ L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALRDLSQSDSREAEAEKYQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D +VK +L+NIFGGI+RCD++ +G+++A++E+ + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDKNVKSVLVNIFGGIVRCDLIAEGVVAAIQEIGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  ++AESG+N+I A  L +
Sbjct: 351 GTNAPQGRAILAESGVNLIAAHTLQE 376


>gi|74139919|dbj|BAE31798.1| unnamed protein product [Mus musculus]
          Length = 470

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 60  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 118

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 119 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 176

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 177 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 236

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 237 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 296

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 297 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 356

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 357 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 417 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 454


>gi|167034752|ref|YP_001669983.1| succinyl-CoA synthetase subunit beta [Pseudomonas putida GB-1]
 gi|189081772|sp|B0KNW8|SUCC_PSEPG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|166861240|gb|ABY99647.1| succinyl-CoA synthetase, beta subunit [Pseudomonas putida GB-1]
          Length = 388

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEAAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAKAFAAQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKIIKATIDPLVGAQPFQGRELAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F + D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVAQFAKIFVGLAKLFKEHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A    L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 TFHDPSQDDPREAHAASFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 351 GNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 387


>gi|297537990|ref|YP_003673759.1| succinyl-CoA synthetase subunit beta [Methylotenera sp. 301]
 gi|297257337|gb|ADI29182.1| succinyl-CoA synthetase, beta subunit [Methylotenera sp. 301]
          Length = 387

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 204/395 (51%), Positives = 270/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+KY +PV +G V++      +A   +    +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKTLLQKYGIPVPRGQVVTVAKDTAAATTEIASDAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     + + E+LG TL+T Q  P G  VN V +E+   I RELYL
Sbjct: 58  -------GGVKLVKSTTEAQAVVSELLGKTLVTYQNAPDGQLVNQVLIEETLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT   V  IAS+ GGMDIEE+A+  P+KI + + DPL GV      +L   L+L 
Sbjct: 111 SMLVDRTLERVVIIASSAGGMDIEEIAQTSPEKILEEVCDPLNGVVDFQARNLAFKLDLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LY+ F + D++LLEINPL++   G+L  LD K+S DDNALYR   + 
Sbjct: 171 GEQISAFTKILKGLYRLFKENDLALLEINPLVVTAEGKLFALDCKMSIDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+EDS+E  A    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 EQRDWSQEDSKEAVAHHAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGTPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AFKII +D++VK IL+NIFGGIMRCD++ +GI++AVK+V + IP+++RLE
Sbjct: 291 GGATAETVTKAFKIILADNNVKAILVNIFGGIMRCDIIAEGIITAVKDVGMQIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++  SGLN+I+A  L DAA + V AV
Sbjct: 351 GTNVDLGKQMLQTSGLNIISANGLTDAAVQAVKAV 385


>gi|120598558|ref|YP_963132.1| succinyl-CoA synthetase subunit beta [Shewanella sp. W3-18-1]
 gi|146293363|ref|YP_001183787.1| succinyl-CoA synthetase subunit beta [Shewanella putrefaciens
           CN-32]
 gi|189030211|sp|A1RIT3|SUCC_SHESW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081805|sp|A4Y7Q5|SUCC_SHEPC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120558651|gb|ABM24578.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           W3-18-1]
 gi|145565053|gb|ABP75988.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           putrefaciens CN-32]
 gi|319426665|gb|ADV54739.1| succinyl-CoA synthetase, beta subunit [Shewanella putrefaciens 200]
          Length = 388

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   ++
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKVK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAERVVKAAEG 387


>gi|217969348|ref|YP_002354582.1| succinyl-CoA synthetase subunit beta [Thauera sp. MZ1T]
 gi|217506675|gb|ACK53686.1| succinyl-CoA synthetase, beta subunit [Thauera sp. MZ1T]
          Length = 386

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 200/396 (50%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLRKY V   +G    SV AA  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRKYGVVTPRGFHCVSVDAAVKAAEELGGKIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG  L+T QTGP G +V  + +E+GADI  E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQHANDILGMQLVTHQTGPEGQKVRNLLIEEGADIKHEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA + P+KI K+ +DPL+G+T    A L   + + 
Sbjct: 111 AALTDRATQTVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLVGLTDAQAAELAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D F  LY  + + D SL EINPLI+  NG ++ LD+K +FD NALYRH +I 
Sbjct: 171 EGSVAKAVDAFKKLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD  EED+ EIEA +++L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 DFRDFDEEDADEIEASKYDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIMRCD +  G+++A +EV +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPQVKGILVNIFGGIMRCDTIATGVVAAAREVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++A+SGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKILADSGLPIIAADTMAEAATKIVAAVK 386


>gi|163851226|ref|YP_001639269.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
           PA1]
 gi|218530094|ref|YP_002420910.1| malate--CoA ligase subunit beta [Methylobacterium chloromethanicum
           CM4]
 gi|240138379|ref|YP_002962851.1| Malate thiokinase, large subunit [Methylobacterium extorquens AM1]
 gi|259016276|sp|P53594|MTKA_METEA RecName: Full=Malate--CoA ligase subunit beta; AltName:
           Full=MTK-beta; AltName: Full=Malate thiokinase; AltName:
           Full=Malyl-CoA synthetase
 gi|163662831|gb|ABY30198.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           PA1]
 gi|218522397|gb|ACK82982.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           chloromethanicum CM4]
 gi|240008348|gb|ACS39574.1| Malate thiokinase, large subunit [Methylobacterium extorquens AM1]
          Length = 390

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PL++RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESGL++ITA  L +AA+K V A  G
Sbjct: 351 GTNVDEGKKILAESGLDLITADTLTEAARKAVEACHG 387


>gi|7022728|dbj|BAA91703.1| unnamed protein product [Homo sapiens]
          Length = 441

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 173/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 31  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 91  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 148 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+V+GAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVSGAGLAMATMDIIKLHGGTPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 425


>gi|46138741|ref|XP_391061.1| SUCB_NEUCR Probable succinyl-CoA ligase [GDP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, beta
           chain) (SCS-beta) [Gibberella zeae PH-1]
          Length = 445

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V +G V  S   A+   + +     V+K+Q+ AGGRGKG F 
Sbjct: 35  LSIHEYLSADLLRQYGIGVPQGSVAKSAKEAKEIAEKIGNDDMVIKAQVLAGGRGKGTFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 95  N---GLKGGVRVIYSPHEAEMFAEQMIGHKLVTKQTGAGGRLCNSVYICERKFARREFYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    ID  +GVT E    +   L   
Sbjct: 152 AILMDRQNQCPVIVSSSQGGMDIEAVAKDTPDAINTNYIDINVGVTDETAREIATKLGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 212 EQCIEDAKDTIQKLYKIFREKDSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQKEVF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED  E+ A + NL++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 272 EWRDTTQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 332 GGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIARLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+  ++LI +SGL + +  DL  AA+K V   K V
Sbjct: 392 GTNVEKAHQLINDSGLKIFSIDDLQTAAEKSVQLSKVV 429


>gi|187736200|ref|YP_001878312.1| succinyl-CoA synthetase, beta subunit [Akkermansia muciniphila ATCC
           BAA-835]
 gi|226734104|sp|B2UMH5|SUCC_AKKM8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187426252|gb|ACD05531.1| succinyl-CoA synthetase, beta subunit [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 393

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 194/386 (50%), Positives = 261/386 (67%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L  ++ V   KG+  S+   A    + +    YVVK+Q+HAGGRGKG FK
Sbjct: 1   MNIHEYQAKQLFERFGVATPKGIAASTAQEAAQTARNMGLSQYVVKAQVHAGGRGKGTFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V  S++ V     ++L   L+TKQTG  G  V+ + V +  D+ +E Y 
Sbjct: 61  N---GFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYF 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR       +AST+GGMDIEEVA   P+ I +  I+P +G+       +   LEL 
Sbjct: 118 AILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELT 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  N+YK F   D SL+EINPL++  + R+  LD+K +FDDNALYRH +I 
Sbjct: 178 GPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDAKFNFDDNALYRHPEIM 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD +EED RE+EA +++L+YI LDGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 238 EMRDETEEDPREVEAGKYDLNYIGLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++ V  AF+I+TSD +VK +L+NIFGGIMRCDV+ +GI++A K + + IPLV+RLE
Sbjct: 298 GSATEEMVTNAFRILTSDKNVKALLVNIFGGIMRCDVIAQGIVAAAKNIDMKIPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+IG +++A+SG+ +I A +LD+
Sbjct: 358 GTNVEIGKKILADSGIAIIPADNLDE 383


>gi|114649573|ref|XP_001150493.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit isoform
           1 [Pan troglodytes]
          Length = 451

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 172/391 (43%), Positives = 245/391 (62%), Gaps = 3/391 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G  VD    LIA+SGL ++   DLD+AA+ +
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440


>gi|115496292|ref|NP_001068961.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Bos
           taurus]
 gi|122144544|sp|Q148D5|SUCB1_BOVIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|109939816|gb|AAI18444.1| Succinate-CoA ligase, ADP-forming, beta subunit [Bos taurus]
          Length = 463

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 ASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 447


>gi|171689266|ref|XP_001909573.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944595|emb|CAP70706.1| unnamed protein product [Podospora anserina S mat+]
          Length = 446

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL++Y + V KG V  S   AE+  K++     V+K+Q+ AGGRGKG F 
Sbjct: 36  LSIHEYISADLLKQYGIDVPKGAVAKSAAEAEAVAKSIGSDDMVIKAQVLAGGRGKGTFD 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 96  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCNSVYICERKFARREFYL 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID  +GVT E    +   L   
Sbjct: 153 AVLMDRGSQGPVIVSSSQGGMDIEGVAKENPDAINTTYIDINVGVTDEMARDIAVKLGFS 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYK F +KD + +EINPL    + ++  +D+K +FDDNA +R  +  
Sbjct: 213 EQCVDDAVKTIQNLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFNFDDNAEFRQKEAF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 273 EWRDTTQEDADEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + IP++ RL+
Sbjct: 333 GGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  +RLI +SG+ + +  DL +AA+K V   K V
Sbjct: 393 GTNMEEAHRLINDSGMKIFSIDDLQNAAEKAVQLSKVV 430


>gi|46849708|ref|NP_035636.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           precursor [Mus musculus]
 gi|52788305|sp|Q9Z2I9|SUCB1_MOUSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA; Flags:
           Precursor
 gi|26349481|dbj|BAC38380.1| unnamed protein product [Mus musculus]
 gi|26353900|dbj|BAC40580.1| unnamed protein product [Mus musculus]
 gi|33989905|gb|AAH56353.1| Succinate-Coenzyme A ligase, ADP-forming, beta subunit [Mus
           musculus]
 gi|35505380|gb|AAH57605.1| Succinate-Coenzyme A ligase, ADP-forming, beta subunit [Mus
           musculus]
 gi|74141275|dbj|BAE35942.1| unnamed protein product [Mus musculus]
 gi|74210138|dbj|BAE21343.1| unnamed protein product [Mus musculus]
 gi|74226090|dbj|BAE35647.1| unnamed protein product [Mus musculus]
          Length = 463

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 53  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 111

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 112 --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 170 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 230 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 447


>gi|694121|gb|AAA62654.1| malate thiokinase [Methylobacterium extorquens AM1]
          Length = 390

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 259/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG V  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGLKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P+ + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  +I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PL++RL 
Sbjct: 291 GGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESGL++ITA  L +AA+K V A  G
Sbjct: 351 GTNVDEGKKILAESGLDLITADTLTEAARKAVEACHG 387


>gi|254509030|ref|ZP_05121135.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus 16]
 gi|323495096|ref|ZP_08100183.1| succinyl-CoA synthetase subunit beta [Vibrio brasiliensis LMG
           20546]
 gi|323498617|ref|ZP_08103609.1| succinyl-CoA synthetase subunit beta [Vibrio sinaloensis DSM 21326]
 gi|219548065|gb|EED25085.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus 16]
 gi|323310647|gb|EGA63824.1| succinyl-CoA synthetase subunit beta [Vibrio brasiliensis LMG
           20546]
 gi|323316315|gb|EGA69334.1| succinyl-CoA synthetase subunit beta [Vibrio sinaloensis DSM 21326]
          Length = 388

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGNMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S +++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAEG 387


>gi|71908976|ref|YP_286563.1| succinyl-CoA synthetase subunit beta [Dechloromonas aromatica RCB]
 gi|123626638|sp|Q47AN8|SUCC_DECAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71848597|gb|AAZ48093.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Dechloromonas
           aromatica RCB]
          Length = 386

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/396 (47%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L+K+ V V +G+  ++V  A  A +TL G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKQILKKFGVTVPRGIHCTTVEDAVKAAETLGGKVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +SL+ V     +ILG  L+T QTGP G +V  + +E+GADI  E Y+
Sbjct: 52  -GGRGKGGGVKVATSLEKVREYAGQILGMQLVTHQTGPEGQKVRHLLIEEGADIKHEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS +GGMDIEEVA   P+KI K+ ++PL+G+T E   +L   + + 
Sbjct: 111 AALTDRATQSVAIMASYEGGMDIEEVAHKTPEKIVKVFVNPLVGLTDEQALTLAKGMGMN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     +   +LY  + + D SL EINPLI   +G ++ LD+K +FD NALYR  +I 
Sbjct: 171 EASIPQCIETLKSLYTCYMETDASLAEINPLIHEGDGTVKALDAKFNFDSNALYRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EED  E+EA Q +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AMRDLDEEDPDEVEASQFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K   +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIAEGVVAAAKLTHLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++ +SGL +I+A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKILKDSGLPIISADSMAEAATKIVAAVK 386


>gi|299067884|emb|CBJ39097.1| Succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum CMR15]
          Length = 388

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 197/384 (51%), Positives = 263/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +    ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVKTYASNILGMTLVTHQTGPEGKLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA+ +P+KI  LLIDP  G+       +   + + 
Sbjct: 111 SLVVDRVSQQVALMASSEGGMDIEEVAESHPEKIHTLLIDPQAGLQDAQADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D S  EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASQAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDVKAILVNIFGGIMRCDVIAEGVIAAAKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N D+G +++A+SGL +I A  +
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTM 374


>gi|313672318|ref|YP_004050429.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939074|gb|ADR18266.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 393

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/400 (47%), Positives = 254/400 (63%), Gaps = 13/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGR 58
           MNIHE+QAK + RKY VP  KG V      A    + L G   ++V+K+QIHAGGRGK  
Sbjct: 1   MNIHEHQAKEIFRKYGVPTPKGYVAFKAENAVKIAQQLGGEKEVWVIKAQIHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  S + V    + +LG TL+T QTGP G  V  +Y+E+G DI +E 
Sbjct: 60  ---------GGVKIARSTEEVGLIAKSLLGKTLVTHQTGPEGKVVRRIYIEEGLDIEKEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR   M   IAS++GGM+IEEVA   P+KI ++ +DPLIG        L   L 
Sbjct: 111 YLSILLDRAKEMPVIIASSEGGMEIEEVAAKSPEKIVRIHLDPLIGFQPFHARKLAFALN 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L  +      +    LYK + D D  L+EINPLI   + +   LD+K+SFD+NAL+R  +
Sbjct: 171 LPREEVNRFVNFVQALYKVYEDYDAELVEINPLIRTTDKKFIALDAKVSFDNNALFRQPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            Q +RD++EE+  EIEA  +NLSY+ LDGN+GCMVNGAGLAMATMDIIK  GG PANFLD
Sbjct: 231 AQAMRDLTEEEPTEIEASNYNLSYVKLDGNVGCMVNGAGLAMATMDIIKHEGGNPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  + VA  F+II  D +VK I +NIFGGI+RC+ +  GI+ A K  ++ +P+V+R
Sbjct: 291 VGGGATAETVAKGFEIILRDPNVKSIFVNIFGGIVRCERVANGIVEAAKVTEVRVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           L+G N +    ++   G+ N+I A D+ D A K V A KG
Sbjct: 351 LDGTNAEEAAEILKNCGIKNIIPAKDMKDGAVKAVKAAKG 390


>gi|17545273|ref|NP_518675.1| succinyl-CoA synthetase subunit beta [Ralstonia solanacearum
           GMI1000]
 gi|21264036|sp|Q8Y1Y3|SUCC_RALSO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|17427564|emb|CAD14082.1| probable succinyl-coa synthetase beta chain (scs-beta) protein
           [Ralstonia solanacearum GMI1000]
          Length = 388

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 196/386 (50%), Positives = 269/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA   P+KI  L++DP IG+   +   +   + + 
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQIGLQDAEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAASKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMEE 376


>gi|330994298|ref|ZP_08318226.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Gluconacetobacter
           sp. SXCC-1]
 gi|329758765|gb|EGG75281.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Gluconacetobacter
           sp. SXCC-1]
          Length = 399

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 215/396 (54%), Positives = 275/396 (69%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR Y +PV +G   ++   A  A + L  P+ VVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKALLRSYGMPVPEGRAATTAAEALEAARGLAAPVTVVKAQIHAGGRGAGHFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             P   KGGVR+  SL  V +  R +LG  L+TKQTGP G +V  +Y+E G DI RELY 
Sbjct: 61  GRPEG-KGGVRLARSLDEVDAAARSMLGEVLVTKQTGPAGRKVRTLYIESGCDIARELYF 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR SG +  +AS  GGM+IEEVA   P++I K  +DP  G+       L   L L 
Sbjct: 120 SMLVDRVSGRIVIVASPDGGMEIEEVAARTPERILKEYVDPAKGLCDYQSRDLAVRLGLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A     ++    Y AF   D +++EINPL++  +G L  LD+K+SFD+NAL+RH ++ 
Sbjct: 180 GRAIRAFQNVVRAAYTAFTGLDAAIVEINPLVVTGSGDLLALDAKMSFDENALFRHPELA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED RE EA  + L+Y+ LDGNIGCMVNGAGLAMATMDIIK+ G  PANFLDVG
Sbjct: 240 RLRDEHEEDPREREAAGYGLAYVGLDGNIGCMVNGAGLAMATMDIIKMEGEEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VAAAF+I+ SD  V+GIL+NIFGGIMRCDV+ + I++A  E  +N+PLV+RL 
Sbjct: 300 GGASKERVAAAFRILVSDPKVRGILVNIFGGIMRCDVIAEAIIAASHETGLNVPLVVRLA 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  L+AESGL +I A DL DAA+KIV AV+
Sbjct: 360 GTNVERGKALLAESGLTIIPADDLGDAARKIVAAVR 395


>gi|281349742|gb|EFB25326.1| hypothetical protein PANDA_007758 [Ailuropoda melanoleuca]
          Length = 413

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 172/391 (43%), Positives = 245/391 (62%), Gaps = 3/391 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 23  LSLHEYMSMDLLQEAGVSIPKGHVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 83  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 140 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFP 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 200 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED RE  A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 260 DLQDWTQEDERERGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 320 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G  VD    LI +SGL ++   DLD+AA+ +
Sbjct: 380 GTRVDDAKALITDSGLKILACDDLDEAAKMV 410


>gi|212535888|ref|XP_002148100.1| succinyl-CoA synthetase beta subunit, putative [Penicillium
           marneffei ATCC 18224]
 gi|210070499|gb|EEA24589.1| succinyl-CoA synthetase beta subunit, putative [Penicillium
           marneffei ATCC 18224]
          Length = 444

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE+  K++ G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSAELLKSYGVGVPKGHVARTADEAEAVAKSIGGDDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAAGRLCNAVYIVERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P  I    ID  IGVT E   S+   L   
Sbjct: 151 AILMDRQTQSPVIVSSSQGGMDIETVAKETPDAIRTTPIDITIGVTDEIARSIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  +   NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 211 AQCIEDAKNTIQNLYKVFIEKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P++ RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMGLRTPVIARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +L+ ES L +    DL  AA+K V   K V
Sbjct: 391 GTNMEQARKLLDESNLKIFCIEDLQSAAEKSVQFSKVV 428


>gi|223937437|ref|ZP_03629342.1| succinyl-CoA synthetase, beta subunit [bacterium Ellin514]
 gi|223893988|gb|EEF60444.1| succinyl-CoA synthetase, beta subunit [bacterium Ellin514]
          Length = 401

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 199/402 (49%), Positives = 270/402 (67%), Gaps = 10/402 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           MNIHEYQAK LL +Y V V  G V S+   A++  + L      L VVKSQIHAGGRGKG
Sbjct: 1   MNIHEYQAKQLLSQYGVAVPPGDVCSTADEAKAIAEKLFAKGEKLVVVKSQIHAGGRGKG 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            FK   +  +GGV++  +   V    + +LG  L+TKQTGP G  V+ + V     I +E
Sbjct: 61  TFK---SGFQGGVKLCKTADDVFEKAKAMLGQVLVTKQTGPEGRLVSKLLVAAAPAIKKE 117

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL++L+DR S     + ST+GG+DIEEVA+  P+KI K  IDP +G+       L   L
Sbjct: 118 LYLAVLLDRASSRPLVMVSTEGGVDIEEVAEKTPEKIVKETIDPAVGMMPYQARKLAAAL 177

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL--IIMKNGR--LRVLDSKISFDDNAL 233
            ++G        L   +Y+ + + D +++EINPL  I   +G+  +  +D+K+  DDNAL
Sbjct: 178 GIKGDLINPAAKLLMGVYRTWWECDAAMVEINPLCIIEGPDGKDTIVAVDAKVGMDDNAL 237

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           YRH ++QE+RD++EE   EIEA + NL+YI LDG+I C+VNGAGLAMATMDII+ +GG P
Sbjct: 238 YRHKNVQEMRDLAEEAPLEIEASKFNLNYIKLDGSIACLVNGAGLAMATMDIIQHFGGNP 297

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA +++V AAFKII SD  VKGIL+NIFGGIM C+V+  GI++AV+E  + +
Sbjct: 298 ANFLDVGGGASKEQVTAAFKIILSDPHVKGILVNIFGGIMDCNVIATGIVAAVRETGLKL 357

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           PLV+RLEG NV+ G + + ESGL +I+   + DAAQK+V AV
Sbjct: 358 PLVVRLEGNNVEAGKKTLKESGLTIISGDSMSDAAQKVVKAV 399


>gi|296189298|ref|XP_002742721.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Callithrix jacchus]
          Length = 446

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYMSMELLQEAGVSIPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 96  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID + G+  E    L   +   
Sbjct: 153 AITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIVEGIKKEQALRLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 213 PNIVDSAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    L A+SGL ++   DLD+AA+ +V   + V
Sbjct: 393 GTRVDDAKALRADSGLKILACDDLDEAARMVVKLSEIV 430


>gi|322709852|gb|EFZ01427.1| putative succinyl-CoA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 447

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y V V KG V  +   A++  K +     V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGVGVPKGAVAKTAEEAKAVAKEIGTEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S        ++++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPHEAEMFAQQMIGHKLITKQTGAGGRLCNAVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    +D   GVT +    +   L   
Sbjct: 154 AILMDRASQSPVIVSSSQGGMDIETVAKESPDAIITTYVDINTGVTDDIARGIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F ++D + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 214 EQCVEDAKDTIQKLYKIFLERDSTQIEINPLSETNDHQVLCMDAKFGFDDNADFRQKEVF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+ED  E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 EWRDTSQEDPDEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 334 GGATPAAIQEAFELITSDPKVTAIFVNIFGGIVRCDHIATGLIKTVENLNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+  +++I ESG+ + +  DL  AA+K V   K V
Sbjct: 394 GTNVEQAHKIINESGMKIFSIDDLQSAAEKSVQLSKVV 431


>gi|145590011|ref|YP_001156608.1| succinyl-CoA synthetase subunit beta [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|189081767|sp|A4SZY0|SUCC_POLSQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145048417|gb|ABP35044.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 389

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 192/384 (50%), Positives = 266/384 (69%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LLR++NVPV  G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L T QTGP G +VN + +EDGADI +E Y 
Sbjct: 52  -GGRGKGGGVKLARSMDEVKKYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +     +AS++GGMDIEEVA+ +P+KI K+ +DP++G+T  D   +   + + 
Sbjct: 111 SIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIVAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F NLYK + D D SL+EINPLI+  NG+++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDAKFNFDPNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDIDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + SV+ IL+NIFGGIMRCDV+  G+++A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNKSVEAILVNIFGGIMRCDVIADGVVTACKAVNLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G +++A+SGL +I+A  +
Sbjct: 351 GTNEELGKKILADSGLPIISADSM 374


>gi|113969977|ref|YP_733770.1| succinyl-CoA synthetase subunit beta [Shewanella sp. MR-4]
 gi|114047212|ref|YP_737762.1| succinyl-CoA synthetase subunit beta [Shewanella sp. MR-7]
 gi|123029739|sp|Q0HJQ4|SUCC_SHESM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123326615|sp|Q0HW00|SUCC_SHESR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|113884661|gb|ABI38713.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           MR-4]
 gi|113888654|gb|ABI42705.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           MR-7]
          Length = 388

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAANSLTDAAEQVVKAAEG 387


>gi|302879759|ref|YP_003848323.1| succinyl-CoA synthetase, beta subunit [Gallionella
           capsiferriformans ES-2]
 gi|302582548|gb|ADL56559.1| succinyl-CoA synthetase, beta subunit [Gallionella
           capsiferriformans ES-2]
          Length = 388

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 200/397 (50%), Positives = 276/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VP  +GV   SV  A +A + L G L+VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPTPRGVACFSVDEAVAAAEVLGGGLWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTG  G  V  + VE+GA I RE YL
Sbjct: 52  -GGRGKGGGVKVARSLDEVRQAAGQILGMHLVTHQTGADGQVVRRLLVEEGAQIAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR S  VA +AS++GGM++EEVAK+ P+KI  L IDP++G+   D A +  ++ + 
Sbjct: 111 GMVVDRDSQRVALLASSEGGMEVEEVAKNTPEKIHTLRIDPVLGLIDTDAADVARLIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LY+AF +K+  L EINPL++  +GR+  LD+K +FD NAL+RH +I 
Sbjct: 171 EDSIAGAVVVLQGLYRAFVEKEAMLAEINPLVLTADGRVIALDAKFNFDSNALFRHPEIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +LSYI+LDG+I C+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 TYRDLDEEDPAEIEASKFDLSYISLDGDIACLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK++  + ++K IL+NIFGGIM+CDV+ +GI++AV+EV +++PLV+RLE
Sbjct: 291 GGATREKVTEAFKLMLKNPNLKAILVNIFGGIMKCDVIAEGIVAAVREVHLSVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+G +++A+SGL +I+  D+ DAAQK+V A +G
Sbjct: 351 GTNVDLGKKILADSGLPIISGADMADAAQKVVAAARG 387


>gi|187469277|gb|AAI66998.1| Sucla2 protein [Rattus norvegicus]
          Length = 438

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 28  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 87  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGAKGRICNQVLVCERKYPRREYYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  +D + GV  E   +L   +   
Sbjct: 145 AITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVKEPVDIIEGVKKEQAVTLAKKMGFP 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 205 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVLCMDAKINFDSNSAYRQKKIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED R+ +A   +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 265 ALQDWSQEDERDKDAADADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCD++ +GI+ AVK+++I IP+V+RL+
Sbjct: 325 GGATVHQVTEAFKLITSDKRVQAILVNIFGGIMRCDIIAQGIVMAVKDLEIRIPVVVRLQ 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 385 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 422


>gi|124268441|ref|YP_001022445.1| malate--CoA ligase subunit beta [Methylibium petroleiphilum PM1]
 gi|124261216|gb|ABM96210.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylibium
           petroleiphilum PM1]
          Length = 389

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 183/396 (46%), Positives = 254/396 (64%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL  + VPV +G V  S   A  A   L G  + VK+QIH+GGRGK    
Sbjct: 1   MDIHEYQAKELLAGFGVPVPRGSVAYSADQAVYAATELGGWHWAVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V +  + +LG+TL+T QTGP G  VN +YVE      RELYL
Sbjct: 58  -------GGVKLCRTYQEVAAAAKAMLGATLVTYQTGPAGKVVNRLYVEQAEPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    +  IAS  GGM+IEE+A D P+ I ++ ++P +G+       +   L L 
Sbjct: 111 GFVLDRKIERIRVIASANGGMEIEEIAHDKPESILQIEVEPAVGLQPFQAREIAFGLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D +++EINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 171 IKQVSQAVTAIMGCYRAFRDLDATMVEINPLVVTKDQRVLALDAKMSFDDNALFRRRQIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RDV+EED RE  A QH L+Y+ L+G+IGC++NGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 EMRDVAEEDPREATANQHGLNYVGLEGDIGCIINGAGLAMATMDMIKYAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AF ++ SD +VK IL+NIF GI RCD + +G++ A K   + +PL++RL 
Sbjct: 291 GGASPERVGQAFNLVLSDRNVKAILVNIFAGINRCDWVAQGVVQAAK--GLRVPLIVRLA 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++ E GL +ITA  L +AAQK V A +
Sbjct: 349 GTNVEEGQKIVRECGLPIITADSLAEAAQKAVQAAR 384


>gi|66821399|ref|XP_644183.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
 gi|74860306|sp|Q869S7|SUCB2_DICDI RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|60472164|gb|EAL70117.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
          Length = 420

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 260/396 (65%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K+L+ KY V   K  V++    A  A   L G   VVK+Q+HAGGRGKG F 
Sbjct: 27  LNLHEYQSKSLMDKYGVNTQKWRVVTKASDAIKAASELNGE-LVVKAQVHAGGRGKGSFI 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV +  + K       E+LG  L+TKQT   G++V  V + +  D  RELY 
Sbjct: 86  E--TGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKRELYF 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR  G    IAS QGG+DIE VA++ P  IFK  ID + G+  E   +L + L   
Sbjct: 144 AIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEKLGFT 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+          NLY+ F   D + +EINP     +G++  +D+KI+FDDNA +R  +I 
Sbjct: 204 GEKAKIAQQQMENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQKEIF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD +EED RE+EA +  L+YI LDGNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 264 EMRDTAEEDPREVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +  V  AFKI+T D  VK +L+NIFGGIM+CD++  GI++A K+V + IPLV+RLE
Sbjct: 324 GSASEQAVTEAFKILTKDPRVKCLLVNIFGGIMKCDIIASGIVNASKQVGLKIPLVVRLE 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+IG  ++ +SGLN+ +A DLDDAA K V+ +K
Sbjct: 384 GTNVNIGKEILEKSGLNITSASDLDDAAIKAVNCLK 419


>gi|120554084|ref|YP_958435.1| succinyl-CoA synthetase, beta subunit [Marinobacter aquaeolei VT8]
 gi|189081746|sp|A1TZS9|SUCC_MARAV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120323933|gb|ABM18248.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Marinobacter
           aquaeolei VT8]
          Length = 388

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +   A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIACDTPKEAVAAADEIGGDGWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +     + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F + D++L+EINPL+I   G L  LD+K+  D NALYR   I 
Sbjct: 171 GKQIGQFTKIFLGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKKIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+EDSRE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 EMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +V+ +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AESGLN+I A  L DAA+++V A  G
Sbjct: 351 GNNAELGTKVLAESGLNIIAATSLADAAEQVVKAAGG 387


>gi|262198319|ref|YP_003269528.1| succinyl-CoA synthetase subunit beta [Haliangium ochraceum DSM
           14365]
 gi|262081666|gb|ACY17635.1| succinyl-CoA synthetase, beta subunit [Haliangium ochraceum DSM
           14365]
          Length = 390

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 206/400 (51%), Positives = 266/400 (66%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI----KTLPGPLYVVKSQIHAGGRGK 56
           M IHEYQ K LL++Y VPV  G+  +SV  A +A+    K     + VVK+QIHA     
Sbjct: 1   MKIHEYQGKELLKRYGVPVPFGIAATSVEDAIAAVPKVQKEAGTDVVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV+V  + ++    I +I G  L+T QTGP G +V  + VE G DI  
Sbjct: 56  -----GGRGKGGGVKVCKNAEAAEKAINDIYGMQLVTHQTGPEGKKVQRLLVEQGLDIAH 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL L +DR SG +  +AST+GGM+IEEVA+  P+KI K  I+P +G       SL   
Sbjct: 111 EYYLGLTLDRASGRITVMASTEGGMEIEEVAERTPEKILKATINPAVGWQDYQARSLGFA 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L  +           L KA+ + D SLLEINPL+   +GR+  LD+K++FDDNALYRH
Sbjct: 171 LGLDAKQVRALSSFLQALTKAYWEMDCSLLEINPLVTTNDGRVLALDAKVNFDDNALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+++ RD+SEED  E EAK+++LS+I LDGNIGCMVNGAGLAM+TMDIIK YGG PANF
Sbjct: 231 KDLEDWRDLSEEDPAETEAKKYDLSFIKLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV AAFKIITSD SVK I INIFGGIM+CD +  G+++AVKEV + +PLV
Sbjct: 291 LDVGGGATAEKVTAAFKIITSDPSVKSIFINIFGGIMKCDTIANGVVTAVKEVGLKVPLV 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG NVD+G +++ ESGLN++ A D+ D A+K V   K
Sbjct: 351 VRLEGTNVDLGKKILEESGLNLVAAADMADGAKKAVEHAK 390


>gi|311694415|gb|ADP97288.1| succinyl-CoA synthetase, beta subunit [marine bacterium HP15]
          Length = 388

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIACDTPKEAVDAAGEIGGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +     + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEEIREFAEKWLGQNLVTYQTDENGQPVSKILVESLTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F + D++L+EINPL+I   G L  LD+K+  D NALYR   I 
Sbjct: 171 GKQIGQFTKIFVGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKKIH 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+EDSRE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 EMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G +++AESGLN+I A  L +AA+++V A  G
Sbjct: 351 GNNAEKGTQVLAESGLNIIAATSLSNAAEQVVKAAGG 387


>gi|302899060|ref|XP_003047970.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728902|gb|EEU42257.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 447

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 245/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y V V KG V  +   A+   + +     V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGVGVPKGAVAKTAKEAKQVAEQIGTEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S        ++++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPHEAEMFAQQMIGYNLITKQTGAGGRLCNSVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P  I    ID  +GVT E    +   L   
Sbjct: 154 AILMDRQNQCPVIVSSSQGGMDIETVAKENPSAINTNYIDINVGVTDEIAREIATKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LY+ F +KD + +EINPL    + ++  +D+K  FDDNA +R  D+ 
Sbjct: 214 EQCIEEAKDTIQKLYQIFNEKDSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQKDVF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+ED  E+ A + NL++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 EWRDTSQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD+ V  I +NIFGGI+RCD +  G++  V+ + + IP++ RL+
Sbjct: 334 GGATPAAIKEAFELITSDAKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NVD  ++LI +SGL + +  DL  AA+K V   K V
Sbjct: 394 GTNVDAAHQLINDSGLKIFSIDDLQSAAEKAVQLSKVV 431


>gi|148703906|gb|EDL35853.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit, isoform
           CRA_b [Mus musculus]
          Length = 442

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 32  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 91  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 148

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 149 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 208

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 209 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 329 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 389 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 426


>gi|238898946|ref|YP_002924628.1| succinyl-CoA synthetase, beta subunit [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|259511785|sp|C4K7D7|SUCC_HAMD5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229466706|gb|ACQ68480.1| succinyl-CoA synthetase, beta subunit [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 388

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +PV KG V  S   AE A   L G L+V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELFARRGLPVPKGYVCRSAGEAEKATTELGGDLWVAKCQVHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLCNNPQDVSAFAEQWLGKNLVTYQTDLQGQPVHHILVEAATDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AST+GG++IE+VA+  P  I K+ IDPL G        L   L L 
Sbjct: 111 GAVIDRSSSRVVFMASTEGGVEIEKVAEKTPHLIHKVTIDPLTGPQPFQGRELAFQLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F NL K F + D++LLEINPL+I K   L  LD+K++ D NALYR  +++
Sbjct: 171 GKKVSQFSQIFMNLAKLFLECDLALLEINPLVITKKEELICLDAKLTVDGNALYRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ DV++ED+RE  A Q  L+Y+AL+GNIGCMVNGAGLAM TMD++KLYG  PANFLDVG
Sbjct: 231 QIHDVTQEDAREAHAAQFELNYVALEGNIGCMVNGAGLAMGTMDMVKLYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK IL+NIFGGI+RCD++  GI++AV EV + IP+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAILVNIFGGIVRCDLIADGIIAAVAEVGMQIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G + +++SGLN+I A  L  AA++I  AVK
Sbjct: 351 GNNAKPGAKKLSDSGLNIIAANSLTHAAKQIAAAVK 386


>gi|170726192|ref|YP_001760218.1| succinyl-CoA synthetase subunit beta [Shewanella woodyi ATCC 51908]
 gi|226734990|sp|B1KPH0|SUCC_SHEWM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169811539|gb|ACA86123.1| succinyl-CoA synthetase, beta subunit [Shewanella woodyi ATCC
           51908]
          Length = 388

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 255/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V      + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKNEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRASRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLAGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NALYR   I+
Sbjct: 171 PTQLKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNADLGREVLANSDLDIIAATSLTDAAEQVVKAAEG 387


>gi|119899622|ref|YP_934835.1| succinyl-CoA synthetase subunit beta [Azoarcus sp. BH72]
 gi|189046880|sp|A1KAU3|SUCC_AZOSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119672035|emb|CAL95949.1| probable succinyl-CoA synthetase, beta chain [Azoarcus sp. BH72]
          Length = 386

 Score =  464 bits (1195), Expect = e-129,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRKY V   +G+   SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKEVLRKYGVVTPRGIPCFSVDEAVKAAEELGGKIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L+T QTGP G +V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLGKSLDEVRTLAGQILGMQLVTHQTGPEGQKVRRLLIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA + P+KI K+ +DPL G+T      L   + + 
Sbjct: 111 AALTDRATQKVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLAGLTDAQAIELAKGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D F  LY  + + D SL EINPLI+  NG ++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASIPQAVDTFKKLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 AYRDLDEEDADEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A KEV +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVVAAAKEVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I+A  + +AA KIV  VK
Sbjct: 351 GTNEDLGKKILAESGLPIISADTMAEAATKIVAEVK 386


>gi|641970|gb|AAA61787.1| succinyl-CoA synthetase beta chain [Coxiella burnetii]
          Length = 386

 Score =  464 bits (1195), Expect = e-129,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 274/396 (69%), Gaps = 15/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL+KYN+PV    V+ +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  + + + S ++ +LG+ L+T QT   G  VN + VE  +DI RELYL
Sbjct: 58  -------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA    +KI K+ IDP IG+       L   L LQ
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVA----EKILKVTIDPAIGLQPFQCRQLFFGLGLQ 166

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   LY+ F ++D+SLLEINPL+I  +G L  LD+KI+ DD+ALYR  ++
Sbjct: 167 DLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSEL 226

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD ++ED  E  A+Q  L+YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDV
Sbjct: 227 REMRDTTQEDEHETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSGGDPANFLDV 286

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A +++V  AFKII SD +VKGIL+NIFGGI+RCD++  GI+SAVKEV I++P+V+RL
Sbjct: 287 GGTATKERVTEAFKIIVSDKNVKGILVNIFGGIVRCDLIADGIISAVKEVGIDVPVVVRL 346

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N  +G + +A+SG+N+I A    DAA++IV  V
Sbjct: 347 EGNNAQLGAKKLADSGMNIIAAKGFADAAEQIVKQV 382


>gi|83746094|ref|ZP_00943149.1| Succinyl-CoA synthetase beta chain [Ralstonia solanacearum UW551]
 gi|207728009|ref|YP_002256403.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum MolK2]
 gi|207742410|ref|YP_002258802.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum IPO1609]
 gi|300705083|ref|YP_003746686.1| succinate-CoA ligase (ADP-forming) subunit beta [Ralstonia
           solanacearum CFBP2957]
 gi|83727277|gb|EAP74400.1| Succinyl-CoA synthetase beta chain [Ralstonia solanacearum UW551]
 gi|206591253|emb|CAQ56865.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum MolK2]
 gi|206593800|emb|CAQ60727.1| succinyl-coa synthetase beta chain (scs-beta) protein [Ralstonia
           solanacearum IPO1609]
 gi|299072747|emb|CBJ44100.1| Succinate-CoA ligase (ADP-forming) beta subunit [Ralstonia
           solanacearum CFBP2957]
          Length = 388

 Score =  464 bits (1195), Expect = e-129,   Method: Composition-based stats.
 Identities = 194/384 (50%), Positives = 267/384 (69%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG TL+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR S  VA +AS++GGMDIEEVA   P+KI  L++DP  G+   +   +   + + 
Sbjct: 111 SMVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQAGLQDAEADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + ++K IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNLKAILVNIFGGIMRCDVIAEGVIAASKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N D+G +++A+SGL +I A  +
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTM 374


>gi|284007864|emb|CBA73773.1| succinyl-CoA synthetase beta chain [Arsenophonus nasoniae]
          Length = 388

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/386 (48%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G    +V  AE A   L    +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLLADYGLPVPTGYACKTVKEAEDATTKLGNGPWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V ++   V       LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNNRDEVRLFAENWLGKRLVTYQTDAHGQPVNQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  + F+AST+GG++IE+VA+  P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVIDRATRRIVFMASTEGGVEIEKVAEQTPELIHKAIIDPLTGPMPYQARELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +LF  L   F  +D++L+EINPL+I K G L  LD K+S D NALYR  ++Q
Sbjct: 171 GKQVEQFSNLFIGLATIFLARDLALIEINPLVITKQGDLICLDGKLSVDSNALYRQAELQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 KLRDISQEDPREAHASEWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V  +L+NIFGGI+RCD++  GI+ AVKE+ + +P+++RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVKEIGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGL +  A  L D
Sbjct: 351 GNNAELGAQKLADSGLKITAATSLTD 376


>gi|218781620|ref|YP_002432938.1| succinyl-CoA synthetase subunit beta [Desulfatibacillum
           alkenivorans AK-01]
 gi|226734943|sp|B8FLW6|SUCC_DESAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218763004|gb|ACL05470.1| Succinate-CoA ligase (ADP-forming), beta subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 386

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 202/396 (51%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L   Y VPV KG  + SV  A  A K L     VVK+QIHA         
Sbjct: 1   MKIHEYQAKELFANYGVPVPKGKPVFSVDEAVEAAKELGDFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +   EILG  L+T QTGP G +V  + VE G DI +ELY 
Sbjct: 52  -GGRGKGGGVKLAQNIDEVKTIAGEILGMQLVTHQTGPEGQKVQKLLVEQGLDIAKELYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR +  +  + S  GGMDIEEVA   P+KI K+ +DPL+GV           L L 
Sbjct: 111 SIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGVQGYHCRQAAYRLNLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      +   LYK F D D SLLEINPL++  +  +  LD+KI+FDD+ALYRH DIQ
Sbjct: 171 PAAIKPFIKMVQGLYKMFMDTDCSLLEINPLVLTGDDGIIALDAKINFDDSALYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EE+  E+EA + NL+YI +DGN+G MVNGAGLAMATMDIIK  G  PANFLDVG
Sbjct: 231 EYRDLDEEEPLEVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIKQAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ ++V   F+II SD +VKGILINIFGGI+RCDVL  G++ A K+V +N+P+V+R+E
Sbjct: 291 GGANAEQVENGFRIILSDKNVKGILINIFGGILRCDVLASGVVEAAKKVGLNVPVVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G R++AESGLN+  A DL DAA K+   V+
Sbjct: 351 GTNVEEGRRILAESGLNLTGAEDLKDAAAKVAQIVQ 386


>gi|157961614|ref|YP_001501648.1| succinyl-CoA synthetase subunit beta [Shewanella pealeana ATCC
           700345]
 gi|189081804|sp|A8H3H6|SUCC_SHEPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157846614|gb|ABV87113.1| succinyl-CoA synthetase, beta subunit [Shewanella pealeana ATCC
           700345]
          Length = 388

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A +G
Sbjct: 351 GTNADLGREVLANSDLDIIAATSLTDAAEQVVKAAEG 387


>gi|109120691|ref|XP_001100026.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 5 [Macaca mulatta]
          Length = 463

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I    ID   G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A Q NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI++A+K+++I IP+V+RL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
              VD    LIA SGL ++   DLD+AA+ +V   + V
Sbjct: 410 XTRVDDAKALIAGSGLKILACDDLDEAARMVVKLSEIV 447


>gi|258577823|ref|XP_002543093.1| succinyl-CoA ligase beta-chain [Uncinocarpus reesii 1704]
 gi|237903359|gb|EEP77760.1| succinyl-CoA ligase beta-chain [Uncinocarpus reesii 1704]
          Length = 443

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + V KG V  +   AE+  K L G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGVPKGEVARTADEAEAVAKKLGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRILYSPTEARMFAGQMIGHKLITKQTGARGRLCNAVYICERKYARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVSSSQGGMDIEAVAKESPDAITTTKIDINVGVTDEIARKIATGLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LY+ F ++D + +EINPL    + R+  +D+K+ FDDNA +R  D+ 
Sbjct: 210 EQCIEEAKDTIQKLYQVFMERDATQIEINPLAETTDYRVLAMDAKLGFDDNAEFRQKDVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDPDEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P+V RL+
Sbjct: 330 GGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL +AA+K V   K V
Sbjct: 390 GTNMEKAHQLINDSGLKIFSIEDLQNAAEKSVQFSKVV 427


>gi|260776537|ref|ZP_05885432.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607760|gb|EEX34025.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 388

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/397 (47%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFAQYDLALLEINPLVVTGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S +++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAEG 387


>gi|119503180|ref|ZP_01625264.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2080]
 gi|119460826|gb|EAW41917.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2080]
          Length = 389

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ KAL  +Y +PV+ G  +S+   A SA + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKALFAQYGLPVSVGHAVSTPEEARSAAEKIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +     L   L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDSPDDAAAFAEHWLDKRLVTYQTDVDGQPVSKILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  + F+AST+GG++IE+VA++ P+KI +  IDPL G        L   L L+
Sbjct: 111 GAVLDRASRRIVFMASTEGGVEIEKVAEETPEKILRAEIDPLTGPQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F DKD++L+E+NPL+I   G L  LD+KI  D NALYRH D++
Sbjct: 171 GVQVKQFVAIFVGLAKLFQDKDLALIEVNPLVITDEGNLHCLDAKIVADSNALYRHADLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A + +L+Y+ALDG+IGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAHAAEWDLNYVALDGSIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN++ A  L DAA+++V A  G
Sbjct: 351 GNNAELGQKVLADSGLNIMAASSLTDAAEQVVAAAGG 387


>gi|87308498|ref|ZP_01090639.1| succinyl-CoA synthetase (beta subunit) [Blastopirellula marina DSM
           3645]
 gi|87289055|gb|EAQ80948.1| succinyl-CoA synthetase (beta subunit) [Blastopirellula marina DSM
           3645]
          Length = 394

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/395 (47%), Positives = 255/395 (64%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR   V V + +V  +   A  A + L G + VVK+QIHAGGRGKG  K
Sbjct: 1   MKIHEYQAKQLLRDAGVAVPRNIVAKTPEEAAKAYEELGGKIAVVKAQIHAGGRGKGTVK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     + GV++  S     +    +LG  L+T QTGP G  V+ V VE+G DI RELY+
Sbjct: 61  DNA--DQRGVQLVKSADEAKAVAAALLGKELVTIQTGPEGKLVSQVLVEEGCDIARELYM 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     + S++GG +IEEVA   P+ I K   DP  G  +  V  LC  L ++
Sbjct: 119 GIVLDRAAAKPVLMMSSEGGTEIEEVAAHSPELILKEHFDPSRGPDAFQVRKLCKKLGIE 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            L K + D D SLLEINPL+I  +G +  LD K++FD N L+RH  I 
Sbjct: 179 GATIKSAYKFIQGLCKVYVDTDCSLLEINPLVITGSGDMIALDCKMNFDTNGLFRHPKIV 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEE+  E++A    LSY+ L+GNIGC+VNGAGLAMATMDIIKL+GG P+NFLDVG
Sbjct: 239 ELRDLSEEEPAEVKAADTGLSYVKLEGNIGCLVNGAGLAMATMDIIKLHGGEPSNFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D+V  AF+I+ +D +VK +L+NIFGGIMRC  +   ++ A K V  N+PLV+RLE
Sbjct: 299 GGANVDQVTEAFRILLADKNVKAVLVNIFGGIMRCTTIATAVVEAYKSVGFNVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  V+ G ++++ESG+ +I    L DAA+K+V +V
Sbjct: 359 GTEVEQGRKILSESGIPIIIGDGLTDAAKKVVASV 393


>gi|289621048|emb|CBI51831.1| unnamed protein product [Sordaria macrospora]
          Length = 447

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 246/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V +G V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGIGVPQGDVARNGAEAEAIAKKIGGEDMVIKAQVLAGGRGKGSFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   + VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSSVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    +D  +GVT +    +   L   
Sbjct: 154 AVLMDRASQGPVIVSSSQGGMDIEGVAKENPDAIHTTYVDINVGVTDDMARGIAQKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA YR  DI 
Sbjct: 214 EQCVEEAKDTIQKLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFGFDDNADYRQKDIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED  E+ A Q  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 274 QLRDTTQEDPDEVRAAQSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + IP++ RL+
Sbjct: 334 GGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SG+ + +  DL  AA+K V   K V
Sbjct: 394 GTNMEAAHQLINDSGMKIFSIDDLQSAAEKSVQLSKVV 431


>gi|88798685|ref|ZP_01114268.1| succinyl-CoA synthetase subunit beta [Reinekea sp. MED297]
 gi|88778448|gb|EAR09640.1| succinyl-CoA synthetase subunit beta [Reinekea sp. MED297]
          Length = 389

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 186/390 (47%), Positives = 260/390 (66%), Gaps = 10/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +      AI  +PG ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKQYGLPVSEGYACDTPEEVVDAIGKIPGEMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S           LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSADEAKEFAAHWLGKNLVTFQTDENGQPVSKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE VA++ P+KI + +IDPL+G        L   L L+
Sbjct: 111 GAVVDRATRRIVFMASTEGGVEIETVAEETPEKILRAIIDPLVGPQPYQARELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F DKD++L+EINPL+I   G L  LD+K+  D NALYRH D+Q
Sbjct: 171 GEQIKQFTKIFLGLANLFIDKDLALIEINPLVITDEGNLHCLDAKLGVDGNALYRHKDLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D ++ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 AMQDPTQEDEREAHAAEWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK + +NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVFVNIFGGIVRCDMIAEGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G N + G++ +A+SGLN+I A  L + A+K
Sbjct: 351 GNNAEAGSKKLADSGLNIIAASSLTEGAEK 380


>gi|3766201|gb|AAC64398.1| ATP-specific succinyl-CoA synthetase beta subunit [Mus musculus]
 gi|148703905|gb|EDL35852.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit, isoform
           CRA_a [Mus musculus]
          Length = 426

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 16  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 74

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 75  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYF 132

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P+ I K  ID + G+  E   +L   +   
Sbjct: 133 AITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFP 192

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I 
Sbjct: 193 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 252

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 253 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 312

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+
Sbjct: 313 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 372

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 373 GTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIV 410


>gi|239947280|ref|ZP_04699033.1| succinyl-CoA synthetase beta chain [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239921556|gb|EER21580.1| succinyl-CoA synthetase beta chain [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 386

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 268/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTERINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L L+
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQVKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A KE+ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKEIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A+K
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAASKIVEAIK 386


>gi|28199797|ref|NP_780111.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa Temecula1]
 gi|71898261|ref|ZP_00680435.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|182682549|ref|YP_001830709.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa M23]
 gi|32130083|sp|Q87A98|SUCC_XYLFT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226735000|sp|B2I9R4|SUCC_XYLF2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|28057918|gb|AAO29760.1| succinyl-CoA synthetase, beta subunit [Xylella fastidiosa
           Temecula1]
 gi|71732000|gb|EAO34057.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|182632659|gb|ACB93435.1| succinyl-CoA synthetase, beta subunit [Xylella fastidiosa M23]
 gi|307578828|gb|ADN62797.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 387

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L  +Y +PV  G + SS   A +A K+L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V      +LG+ + T Q+      VN V V +  +I +ELYL
Sbjct: 58  -------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG+DIE VA + P+KI  L +D + G+       +   L L+
Sbjct: 111 SVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LY+ F DKD+SL+E+NPL I+ NG L  LD KI+ DDNA +RH ++ 
Sbjct: 171 AKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHKELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A +++L+Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S + VK I +NIFGGI+RCD++ +GI++AVKEV + +P+++RLE
Sbjct: 291 GGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G +L+A SGL +I A D++D A+K V AV
Sbjct: 351 GTNVDAGKQLLATSGLAIIPADDINDGAKKAVAAV 385


>gi|255318878|ref|ZP_05360104.1| succinyl-CoA synthetase beta chain [Acinetobacter radioresistens
           SK82]
 gi|262378866|ref|ZP_06072023.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           radioresistens SH164]
 gi|255304134|gb|EET83325.1| succinyl-CoA synthetase beta chain [Acinetobacter radioresistens
           SK82]
 gi|262300151|gb|EEY88063.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           radioresistens SH164]
          Length = 388

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 275/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGILATNADEAVAAFEQLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S +        I+G+ L+T QT   G  VN V V +    + RELY
Sbjct: 58  -------GGVQVVKSKEEAADYTSRIIGTRLVTYQTDANGQPVNSVLVCEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAEETPEKIIKVTVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +         L    Y AF + D +L EINPL + +NG +  +D+K+  D NALYR  ++
Sbjct: 171 KDGQINQFVKLMTGAYHAFVENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPEV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 SALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +DSSV+ +LINIFGGI+RCD++ + I++AV+EV + IP+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADSSVQAVLINIFGGIVRCDMIAEAIIAAVQEVNVTIPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLTLISAQGLADAAEKVVAAVK 387


>gi|85058856|ref|YP_454558.1| succinyl-CoA synthetase subunit beta [Sodalis glossinidius str.
           'morsitans']
 gi|123519751|sp|Q2NUM2|SUCC_SODGM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|84779376|dbj|BAE74153.1| succinyl-CoA synthase beta subunit [Sodalis glossinidius str.
           'morsitans']
          Length = 388

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   +++  AE +   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACNTLREAEESASKIGAGPWVVKCQVHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKLKEEIRAFAEQWLGKRLVTYQTDALGQPVNQILVEVATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GVVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I   G L  LD K+S D NAL+R  +++
Sbjct: 171 GKQVSQFSKIFMGLATLFLERDLALVEINPLVITGAGDLICLDGKLSADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMRDHSQEDEREAHATQLELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDEKVKAVLVNIFGGIVRCDLIADGIIGAVSEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 351 GNNAELGAKRLADSGLNIIAATSLTDAAQQVVAAVEG 387


>gi|45361311|ref|NP_989233.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus (Silurana)
           tropicalis]
 gi|38969875|gb|AAH63370.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus (Silurana)
           tropicalis]
          Length = 460

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 171/398 (42%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL+   V + KG V  +   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 50  LSLHEYLSMDLLKSAGVAIPKGCVAKTPDEAFTVAKEIGSKDLVVKAQVLAGGRGKGTFE 109

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 110 ---GGLKGGVKIVYSPEEAKDIASQMIGKKLFTKQTGEKGRICNHVFICERRYPRREYYF 166

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S+ GG++IE+VA + P  I K  ID + G+  E    L + +   
Sbjct: 167 AIAMERAFQGPVLIGSSHGGVNIEDVAAENPDAIVKEPIDIVEGIKKEQAVRLAEKMGFP 226

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +   NLY  F   D +++EINP++   +G +  +D+KI+FD NA YR  ++ 
Sbjct: 227 SNIVDEAANCMINLYNLFMKYDATMVEINPMVEDASGVVMCMDAKINFDSNAAYRQKEVF 286

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 287 ELRDWSQEDERDRQAAKSDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 346

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AF++ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++++ IP+V+RL+
Sbjct: 347 GGATVHQVTEAFRLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQ 406

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI  SGL ++   DLD+AA+ +V   + V
Sbjct: 407 GTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIV 444


>gi|254463742|ref|ZP_05077153.1| malate--CoA ligase subunit beta [Rhodobacterales bacterium Y4I]
 gi|206684650|gb|EDZ45132.1| malate--CoA ligase subunit beta [Rhodobacterales bacterium Y4I]
          Length = 399

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 173/396 (43%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V V  G +  S   A    + L G  ++VK+Q+HAGGRGK    
Sbjct: 1   MDIHEYQAKEVLSNFGVTVPPGALAYSPEQAAYRARELGGDKWIVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S   +      + G  L+T QTGP G  +  VYVE    I RE+YL
Sbjct: 58  -------GGVKLCNSEAEIYEATENLFGKKLVTHQTGPEGKGIYRVYVEGAVPIAREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V  +AS++GGM+IEE++ + P+ I +  ++P +G+       +   L ++
Sbjct: 111 GFVLDRSSQRVMIVASSEGGMEIEEISAERPESIVRSTVEPAVGLQDFQAREIAFALGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF + D +++EINPL++  + R+  LD+K++FDDNAL+RH  I 
Sbjct: 171 PALTQQMVRTLKGCYQAFSELDATMVEINPLVVTSDNRVIALDAKMTFDDNALFRHPQIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+GNIGC+VNGAGLAMATMD IKL GG PANFLD+G
Sbjct: 231 ELRDKSQEDPREARAADRGLSYVGLEGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SDS+V+ +L+NIF GI RCD + +G++ A++EV++++P+V+RL 
Sbjct: 291 GGATPERVAKAFRLVMSDSNVQAVLVNIFAGINRCDWVAEGVVQALREVQVDVPVVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SGL +I A  L +AA++ V A K
Sbjct: 351 GTNVEEGQKILAQSGLPLIRASSLMEAAERAVGAWK 386


>gi|294085399|ref|YP_003552159.1| succinyl-CoA synthetase subunit beta [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664974|gb|ADE40075.1| succinyl-CoA synthetase, beta subunit [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 386

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 212/380 (55%), Positives = 268/380 (70%), Gaps = 10/380 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK LL  + VPV +G  + SV  A SA   L GP+YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQLLGGFGVPVPRGNAVFSVDDAVSAATELGGPVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+ +V     +ILG  L+T QTGP G  V  +YVEDG DI  ELY+
Sbjct: 58  -------GGVKVVKSVDAVRDAADDILGKVLVTHQTGPEGREVRRLYVEDGCDIASELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  V  IAS++GGMDIEEVA + P KI  L IDP  G+    V  +  +L L+
Sbjct: 111 SLLVDRASSRVTIIASSEGGMDIEEVAANQPDKIISLGIDPATGLQPHHVRRIARVLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G           +LYKAF D D SL+EINPL++   G L  LD+K+SFDDNALYRH D+Q
Sbjct: 171 GTTAKQLPSFLASLYKAFGDLDASLIEINPLVVTGAGDLLALDAKMSFDDNALYRHKDVQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E++A + +L+YI LDG+IGCMVNGAGLAMATMDII+L+G +PANFLDVG
Sbjct: 231 ELRDLTEEDPAEVKASEFDLNYIKLDGDIGCMVNGAGLAMATMDIIQLHGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKII +D +VKGIL+NIFGGIMRCD++ +G++ A + + +  PLV+RLE
Sbjct: 291 GGATTEKVTEAFKIILTDDNVKGILVNIFGGIMRCDIIAEGVVMAARNLGLTKPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVIT 380
           G NV  G +++AESGL++I 
Sbjct: 351 GTNVAEGKKIMAESGLDIIP 370


>gi|163802534|ref|ZP_02196426.1| succinyl-CoA synthetase subunit beta [Vibrio sp. AND4]
 gi|159173617|gb|EDP58436.1| succinyl-CoA synthetase subunit beta [Vibrio sp. AND4]
          Length = 388

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDADGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|153835345|ref|ZP_01988012.1| succinyl-CoA synthetase beta chain [Vibrio harveyi HY01]
 gi|156973654|ref|YP_001444561.1| succinyl-CoA synthetase subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|189030226|sp|A7N158|SUCC_VIBHB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148868136|gb|EDL67295.1| succinyl-CoA synthetase beta chain [Vibrio harveyi HY01]
 gi|156525248|gb|ABU70334.1| hypothetical protein VIBHAR_01357 [Vibrio harveyi ATCC BAA-1116]
          Length = 388

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRITTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|109120695|ref|XP_001099529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial isoform 1 [Macaca mulatta]
          Length = 446

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V + KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKLGSKDVVIKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 96  ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I    ID   G+  E    L   +   
Sbjct: 153 AITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 213 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A Q NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI++A+K+++I IP+V+RL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
              VD    LIA SGL ++   DLD+AA+ +V   + V
Sbjct: 393 XTRVDDAKALIAGSGLKILACDDLDEAARMVVKLSEIV 430


>gi|294054271|ref|YP_003547929.1| succinyl-CoA synthetase, beta subunit [Coraliomargarita akajimensis
           DSM 45221]
 gi|293613604|gb|ADE53759.1| succinyl-CoA synthetase, beta subunit [Coraliomargarita akajimensis
           DSM 45221]
          Length = 398

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 269/396 (67%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP-LYVVKSQIHAGGRGKGRF 59
           MNIHEYQAK LL  Y VPV KG    +    E+AI  L      VVK+QIHAGGRGKG F
Sbjct: 1   MNIHEYQAKRLLADYGVPVPKGYAAQTSREVETAISHLSDDQKIVVKAQIHAGGRGKGTF 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +     KGGV+V    ++ +     +LG+TL+T QT   G +V  +Y+ +  +I  E Y
Sbjct: 61  VD---GYKGGVKVVDGREAALEAAGHMLGNTLVTAQTSAAGRKVQTLYLTEACEIAHEYY 117

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++++DR +     IAST+GGMDIEEVA   P+KI ++ I P +G+       +   L  
Sbjct: 118 LAIVLDRETAQSVIIASTEGGMDIEEVADKTPEKIIRVPISPTMGLRHHHCRRVAFELGF 177

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G        +   LYK F +K+  L+EINPLI    G++  LD+K+SFD NA+++H DI
Sbjct: 178 EGDQVKQFARILTGLYKLFWEKNAMLVEINPLITTPEGQVVALDAKVSFDGNAVFQHPDI 237

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD++EED +E+EA ++NLSYIALDGNI C+VNGAGLAMATMDIIK +GG PANFLDV
Sbjct: 238 MQLRDLNEEDPKEVEASKYNLSYIALDGNIACLVNGAGLAMATMDIIKSFGGEPANFLDV 297

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA++D+V AAFKII SD +V+GIL+NIFGGIM+CDV+ +GI++A K V++ +PLV+RL
Sbjct: 298 GGGANEDQVTAAFKIILSDPNVEGILVNIFGGIMKCDVIARGIVAAAKNVELKVPLVVRL 357

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NVD G  ++ ESG+ +  A  L +AA+ I   V
Sbjct: 358 EGTNVDAGKEILRESGVALTPADSLVEAAEIITKQV 393


>gi|150388321|ref|YP_001318370.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus metalliredigens
           QYMF]
 gi|189046876|sp|A6TKJ3|SUCC_ALKMQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|149948183|gb|ABR46711.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus metalliredigens
           QYMF]
          Length = 397

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K ++++Y + V +  +  +V  A  A   L   +  VK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDLGCEVIAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+   S    IL   LITKQTGP G  VN V +E+G  I +E YL
Sbjct: 58  -------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  VD T+  V  I S +GGMDIEEVA+  P KIFK  IDP IG+       L   + + 
Sbjct: 111 SCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGIN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +      N+Y+ F +KD S++EINPLI  +  ++  LD K+ FDDN+L RH +I 
Sbjct: 171 EACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVVALDCKVCFDDNSLCRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD++EED RE++A +++LSYI+L GNIGCMVNGAGLAMATMD+I  +GGAPANFLDVG
Sbjct: 231 KYRDLTEEDPREVQASKYDLSYISLSGNIGCMVNGAGLAMATMDMIDHFGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ SD  V GI +NIFGGIM+CDV+  GIL AV  + +++PLV+RLE
Sbjct: 291 GGATAEKVKEAFKILISDKKVAGIFVNIFGGIMKCDVIATGILQAVNALDLDVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  ++  S L+VIT   + + A+KIV  V G
Sbjct: 351 GTNVELGKEILKSSWLDVITVNSMAEGAEKIVALVNG 387


>gi|226330945|ref|ZP_03806463.1| hypothetical protein PROPEN_04868 [Proteus penneri ATCC 35198]
 gi|225201740|gb|EEG84094.1| hypothetical protein PROPEN_04868 [Proteus penneri ATCC 35198]
          Length = 388

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 261/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPAGFACTTPREAEEAASKIGQGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +   + LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAEQWLGKRLVTYQTDANGQPVTQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I + +IDPL G        L   L L+
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHRAIIDPLTGPMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K   L  LD K+  D NALYR  +++
Sbjct: 171 GKQVSQFAKIFMGLASIFLERDLALIEINPLVITKEDDLICLDGKLGVDSNALYRQPEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V  +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVSAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G + +A+SGLN+I A  L DAA+++V A +
Sbjct: 351 GNNAELGTKKLADSGLNIIAAKSLTDAAKQVVAAAE 386


>gi|24373496|ref|NP_717539.1| succinyl-CoA synthetase subunit beta [Shewanella oneidensis MR-1]
 gi|77417484|sp|Q8EFN8|SUCC_SHEON RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|24347796|gb|AAN54983.1|AE015636_7 succinyl-CoA synthase, beta subunit [Shewanella oneidensis MR-1]
          Length = 388

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEYWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPFQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+ +V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAANSLTDAAELVVKAAEG 387


>gi|126726904|ref|ZP_01742743.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
           HTCC2150]
 gi|126703862|gb|EBA02956.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
           HTCC2150]
          Length = 397

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 252/397 (63%), Positives = 313/397 (78%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVAKG  I+++  AE+AI +LPGP++VVKSQIHAGGRGKG+F 
Sbjct: 1   MNIHEYQAKEILKGFGAPVAKGAAITALADAEAAIASLPGPVWVVKSQIHAGGRGKGKFT 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL AD+KGGVRV  S +  +++ +E+LG+TL+TKQTGP G +VN +Y+EDGADI RELYL
Sbjct: 61  ELAADAKGGVRVSFSAEEALANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G  +F+AST+GGMDIE VA+D P+ I  + I    G T  D   L D  EL 
Sbjct: 121 SILVDRETGQTSFVASTEGGMDIEAVAEDTPELIHTVGIKASTGCTDADAEKLADAYELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR  G  LF  LY+AF  KDM+LLEINPLI+ K+  ++VLD+K+SFD NAL+RH D+ 
Sbjct: 181 GTAREQGMSLFKTLYEAFTSKDMALLEINPLIVTKSNDIQVLDAKVSFDGNALFRHPDLM 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD++EED +EIEA +++L+YIALDG IGCMVNGAGLAMATMDII LYG +PANFLDVG
Sbjct: 241 EYRDITEEDEKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIINLYGASPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIITSD  VKGIL+NIFGGIMRCDV+ +G++ AVK+V + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVVQAVKDVGLEVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G  V  G  +I +SGLNVI A DLDDAAQKIV AVKG
Sbjct: 361 GTKVQEGKDIINQSGLNVIAADDLDDAAQKIVKAVKG 397


>gi|147903260|ref|NP_001087509.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus laevis]
 gi|51261652|gb|AAH80033.1| MGC82958 protein [Xenopus laevis]
          Length = 458

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 170/398 (42%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL+   V + KG V  +   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 48  LSLHEYLSMDLLKNAGVAIPKGCVAKTPDEAYTVAKEIGSKDLVVKAQVLAGGRGKGTFE 107

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 108 ---GGLKGGVKIVYSPEEAKDIASQMIGKKLFTKQTGEKGRICNHVFICERRYPRREYYF 164

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S+QGG++IE+VA + P  I K  ID + G+  E    L + +   
Sbjct: 165 AIAMERAFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIIEGIKKEQAVRLAEKMGFP 224

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +   NLY  F   D +++EINP++   +G +  +D+KI+FD N+ YR  ++ 
Sbjct: 225 SNIVDEAANCMINLYNLFMKYDATMVEINPMVEDASGVVMCMDAKINFDSNSAYRQKEVF 284

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED R+ +A   +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 285 DLRDWSQEDERDRQAATADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 344

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AF++ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++++ IP+V+RL+
Sbjct: 345 GGATVHQVTEAFRLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQ 404

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI  SGL ++   DLD+AA+ +V   + V
Sbjct: 405 GTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIV 442


>gi|187927574|ref|YP_001898061.1| succinyl-CoA synthetase subunit beta [Ralstonia pickettii 12J]
 gi|226734976|sp|B2UGE2|SUCC_RALPJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187724464|gb|ACD25629.1| succinyl-CoA synthetase, beta subunit [Ralstonia pickettii 12J]
          Length = 388

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 196/384 (51%), Positives = 263/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEAIKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V      ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVKEYASSILGMTLVTHQTGPEGKLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA+ +P+KI  LLIDP  G+       +   + + 
Sbjct: 111 SLVVDRVSQQVALMASSEGGMDIEEVAESHPEKIHTLLIDPQAGLQDAQADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D S  EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVPQARQALQGLYKAFWETDASQAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDVKAILVNIFGGIMRCDVIAEGVIAAAKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N D+G +++A+SGL +I A  +
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTM 374


>gi|91228430|ref|ZP_01262355.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 12G01]
 gi|269967959|ref|ZP_06181999.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 40B]
 gi|91188014|gb|EAS74321.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 12G01]
 gi|269827482|gb|EEZ81776.1| succinyl-CoA synthetase subunit beta [Vibrio alginolyticus 40B]
          Length = 388

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|15839136|ref|NP_299824.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa 9a5c]
 gi|21264058|sp|Q9PAH1|SUCC_XYLFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|9107756|gb|AAF85344.1|AE004061_9 succinyl-CoA synthetase, beta subunit [Xylella fastidiosa 9a5c]
          Length = 387

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/395 (47%), Positives = 264/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L  +Y +PV  G + SS   A +A K+L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V      +LG+ + T Q+      VN V V +  +I +ELYL
Sbjct: 58  -------GGVKFCKTTDEVKQAAAAMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG+DIE VA + P+KI  L +D + G+       +   L L+
Sbjct: 111 SVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LY+ F DKD+SL+E+NPL I+ NG L  LD KI+ DDNA +RH ++ 
Sbjct: 171 AKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHKELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A +++L+Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S + VK I +NIFGGI+RCD++ +GI++AVKEV + +P+++RLE
Sbjct: 291 GGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G +L+A SGL +I A D++D A+K V AV
Sbjct: 351 GTNVDAGKQLLATSGLAIIPADDINDGAKKAVAAV 385


>gi|325981979|ref|YP_004294381.1| succinyl-CoA synthetase, beta subunit [Nitrosomonas sp. AL212]
 gi|325531498|gb|ADZ26219.1| succinyl-CoA synthetase, beta subunit [Nitrosomonas sp. AL212]
          Length = 386

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 194/395 (49%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LRKYN+   +G+   SV+ A  A + L G ++ VK+QI+A         
Sbjct: 1   MKIHEYQAKEILRKYNITTPRGIACFSVNEAVQAAQQLGGEVWAVKAQIYA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     EIL   LIT QTGP G  V+ +++E G  I +E Y+
Sbjct: 52  -GGRGKGGGVKVAKSLEEVRQYAGEILNMRLITHQTGPEGQIVHRLFIEQGVQIEKEFYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR    V  +AS++GG +IE+VA + P+KI K+LIDP+ G+  +    +   + + 
Sbjct: 111 GMVVDRGHQRVCLMASSEGGTEIEKVAAEMPEKIHKVLIDPITGLGQQQAEEVAQKIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +  D   L   LY+AF + D SLLEINPL++    R+  LD+K++FDDNAL+RH +I 
Sbjct: 171 KHSLSDAVTLLQCLYQAFDETDASLLEINPLVLTAGHRVMALDAKMNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  EIEA +H LSYI LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 ALRDLDEEDPIEIEASKHELSYIPLDGNIGCLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++GIL+NIFGGIM+CDV+ +G+++A ++V++ +PLV+RLE
Sbjct: 291 GGATTEKVTEAFKLMLRNPKLQGILVNIFGGIMKCDVIAQGVVAAARDVQLTVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G +++A+SGL +I+A ++ DAAQK V A 
Sbjct: 351 GTNVNLGKKILADSGLKIISADNMADAAQKAVSAA 385


>gi|303320965|ref|XP_003070477.1| succinyl-CoA ligase (GDP-forming), putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240110173|gb|EER28332.1| succinyl-CoA ligase (GDP-forming), putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|320036098|gb|EFW18038.1| succinyl-CoA ligase beta-chain [Coccidioides posadasii str.
           Silveira]
          Length = 443

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + V KG V  +   AE+  K L G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGVPKGEVARTADEAEAVAKQLGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRILYSPTEARMFAGQMIGHKLVTKQTGARGRICNAVYICERKYARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVSSSQGGMDIEAVAKENPEAITTTKIDINVGVTDEIARKIAAGLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F ++D + +EINPL    + R+  +D+K++FDDNA +R  ++ 
Sbjct: 210 EQCLEEAKDTIQKLYKVFMERDATQIEINPLAETTDYRVLAMDAKLNFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P+V RL+
Sbjct: 330 GGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL +AA+K V   K V
Sbjct: 390 GTNMEKAHQLINDSGLKIFSIEDLQNAAEKSVQFSKVV 427


>gi|242794316|ref|XP_002482345.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218718933|gb|EED18353.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 444

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V  G V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSADLLKSYGVGVPHGHVARTAEEAEAVAKQIDGDDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGARGRLCNAVYIVERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P+ I    ID   GVT +   S+   L   
Sbjct: 151 AILMDRQTQSPVIVSSSQGGMDIETVAKETPEAIRTTPIDIKTGVTDDIARSIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  +   NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 AQCIEDAKNTIQNLYKVFLEKDATQIEINPLTETSDHQVLAMDAKLGFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDPDEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P++ RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVTSIFVNIFGGIVRCDAIAQGLINVVRDMGLRTPVIARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI +S L +    DL  AA+K V   K V
Sbjct: 391 GTNMEQARKLIDDSNLKIFCIEDLQSAAEKSVQFSKVV 428


>gi|328771096|gb|EGF81136.1| hypothetical protein BATDEDRAFT_34749 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 457

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 185/395 (46%), Positives = 255/395 (64%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  LL +Y +   +G V  +   AE   K L     V+K+Q+ AGGRGKG F+
Sbjct: 48  LSIHEHLSMGLLNQYGIKTPRGYVAKTSAEAEKCAKDLATNDLVIKAQVLAGGRGKGHFE 107

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV+V  S   +     ++LG+ LITKQTG  G   N VY+ +   + RE Y 
Sbjct: 108 ---SGLKGGVKVVYSATDIKGLAEKMLGNKLITKQTGAGGRICNAVYIVERLYVRREFYF 164

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +     IAS+QGGMDIE VA + P+ I    +D  +G+   D   +   +   
Sbjct: 165 AIVMDRATQGPVIIASSQGGMDIETVAAETPEAIVTHPVDINVGLQLADATRIAKQIGFD 224

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       + F NLYK F +KD +++EINPL  ++NG +  +D+K  FDDNA +R  DI 
Sbjct: 225 GTGATKAAETFMNLYKLFIEKDSTMIEINPLAEIQNGDVMCMDAKFGFDDNADFRQKDIF 284

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED+RE+ A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 285 ALRDTTQEDAREVAAAKWNLNYIGLDGNIGCLVNGAGLAMATMDIIKLNGGDPANFLDVG 344

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D+VA AFKII+SD  V  IL+NIFGGIMRCDV+ +GI++AVK++ + +PL++RL+
Sbjct: 345 GSARADQVAEAFKIISSDPHVSAILVNIFGGIMRCDVIAEGIIAAVKQLGLKLPLIVRLQ 404

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  VD   +LI ESGL + +  DLD+AA   V   
Sbjct: 405 GTQVDAAKKLIDESGLRMYSIDDLDEAAVLSVKLS 439


>gi|289163743|ref|YP_003453881.1| succinyl-CoA synthetase, beta subunit [Legionella longbeachae
           NSW150]
 gi|288856916|emb|CBJ10730.1| succinyl-CoA synthetase, beta subunit [Legionella longbeachae
           NSW150]
          Length = 386

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 198/386 (51%), Positives = 257/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  KYN+PV  G V  SV  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAKYNLPVPNGQVAYSVDDALQVASQLSTNRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V ++   + S ++ +LG+ L+T QT   G  VN V +E+  DI RELYL
Sbjct: 58  -------GGVKVVANKDELASVVKSLLGTRLVTYQTDAQGQPVNAVLIEETCDIGRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA++ P KIFK+++DPL+GV           L LQ
Sbjct: 111 GAVVDRATRRVVIMASTEGGVEIEKVAEETPDKIFKIIVDPLVGVMPFQCREAGFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL++ ++G+L  LD KI+ D NALYR   ++
Sbjct: 171 DDQIKQFTHLMMGLGKMFVECDLSLLEINPLVVSQSGQLICLDGKINIDGNALYRQPQLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 SLRDASQEDERENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIIISDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N  +G  ++ +S LNVI A  L D
Sbjct: 351 GNNAQLGADILNKSDLNVIAATSLTD 376


>gi|170750065|ref|YP_001756325.1| malate--CoA ligase subunit beta [Methylobacterium radiotolerans JCM
           2831]
 gi|170656587|gb|ACB25642.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 392

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 186/394 (47%), Positives = 256/394 (64%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  + V V KG +  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASFGVAVPKGAIAFSPDQAVYAATELGGSFWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    +++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYNEVRDAAKDLLGKRLVTHQTGPEGKPVQRVYVETADPFERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  IAS +GGMDIEE+A   P  + +++++P +G+       +   L L 
Sbjct: 111 GYVLDRKAERVRVIASQRGGMDIEEIAAKEPDSLIQVVVEPAVGLQQFQAREIAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +          N Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 171 IKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRPGIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +HNLSYI L+G IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD +VK IL+NIF GI RCD + +G++ A +EVKI++PLV+RL 
Sbjct: 291 GGASPERVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVQAAREVKIDVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G +++AESGL++ITA  L +AA+K V A
Sbjct: 351 GTNVEAGKKILAESGLDLITADTLAEAAKKAVDA 384


>gi|119179674|ref|XP_001241383.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 443

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + V KG V  +   AE+  K L G   V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGVPKGEVARTADEAEAVAKQLGGEDVVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRILYSPTEARMFAGQMIGHKLVTKQTGARGRICNAVYICERKYARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVSSSQGGMDIEAVAKENPEAITTTKIDINVGVTDEIARKIAAGLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F ++D + +EINPL    + R+  +D+K++FDDNA +R  ++ 
Sbjct: 210 EQCLEEAKDTIQKLYKVFMERDATQIEINPLAETTDYRVLAMDAKLNFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ +  P+V RL+
Sbjct: 330 GGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL +AA+K V   K V
Sbjct: 390 GTNMEKAHQLINDSGLKIFSIEDLQNAAEKSVQFSKVV 427


>gi|254229705|ref|ZP_04923114.1| succinyl-CoA synthetase beta chain [Vibrio sp. Ex25]
 gi|262394881|ref|YP_003286735.1| succinyl-CoA ligase [ADP-forming] subunit beta [Vibrio sp. Ex25]
 gi|151937750|gb|EDN56599.1| succinyl-CoA synthetase beta chain [Vibrio sp. Ex25]
 gi|262338475|gb|ACY52270.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio sp. Ex25]
          Length = 388

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFAQYDLALLEINPLVVTGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|296122653|ref|YP_003630431.1| succinyl-CoA synthetase, subunit beta [Planctomyces limnophilus DSM
           3776]
 gi|296014993|gb|ADG68232.1| succinyl-CoA synthetase, beta subunit [Planctomyces limnophilus DSM
           3776]
          Length = 394

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 195/395 (49%), Positives = 268/395 (67%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHE+QAK LL K  V V +G+V  +   A++A   L   + VVKSQIHAGGRGKGRFK
Sbjct: 1   MKIHEFQAKELLAKAGVAVPRGIVAKTPEEAQAAYGQLGTAVAVVKSQIHAGGRGKGRFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   + GV +  S +   ++   +LG+TL+T QTG  G +V  + VE G  I RE+Y 
Sbjct: 61  EQP--EQPGVVLVKSAEDAAANASRMLGNTLVTIQTGEEGKKVQTLLVEQGLKIAREIYA 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + +VDR       I S++GGMDIEEVA  +P+KI     DP+ G+       L   L L+
Sbjct: 119 ACVVDREVAGPVIIVSSEGGMDIEEVAAHHPEKILTEAFDPVYGLEGYQARKLAFALGLE 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +    F  L K F D D S+ EINPL++ + G L  LD+K++FDDNAL+RH ++ 
Sbjct: 179 GNALKNAEKFFRQLSKFFLDNDCSMAEINPLVVTEEGELLALDAKVTFDDNALFRHQNVL 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD++EE+  EIEA++  LSY+ LDGN+GC+VNGAGLAM+TMD+IKL+GG PANFLDVG
Sbjct: 239 AYRDLAEEEPSEIEAQKWGLSYVKLDGNLGCLVNGAGLAMSTMDLIKLHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ D+V  AF+II +D +VKGIL+NIFGGIM+CD +V  +L+A  ++ I +PLV+RLE
Sbjct: 299 GGANVDQVTEAFRIILADKNVKGILVNIFGGIMKCDTIVTALLTAYDKIGIQVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++  +++AESG  +   +DL DAA+K V ++
Sbjct: 359 GTNVELARKMLAESGKKITAGLDLTDAAKKAVASI 393


>gi|289549229|ref|YP_003474217.1| succinyl-CoA synthetase subunit beta [Thermocrinis albus DSM 14484]
 gi|289182846|gb|ADC90090.1| succinyl-CoA synthetase, beta subunit [Thermocrinis albus DSM
           14484]
          Length = 382

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 183/395 (46%), Positives = 254/395 (64%), Gaps = 14/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  +Y +PV KG V  SV  A+   + L     VVK+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKEIFGRYGLPVPKGGVAFSVEEAQRVAEELGSFPLVVKAQVHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ +   +  +LG  L T Q  P G  V+ V++E    I +E Y 
Sbjct: 58  -------GGVKLVHSMEELTQAVESMLGKVLKTFQC-PEGKPVSRVWIEKATPIKKEYYF 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++     +AS +GGM+IEEVAK+ P  I  L +DP +G+       +   L L 
Sbjct: 110 SITLDRSAAKPVIMASAEGGMEIEEVAKEKPDAILMLHVDPALGLMPSQARKIAFRLGLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L  NLYK + D D SL+E+NPL++ + G L +LD+K+  DDNAL RH DIQ
Sbjct: 170 ---VDRFVPLALNLYKLYMDLDASLVEVNPLVLTEEGDLVILDAKVDVDDNALMRHRDIQ 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D+++ D  E+EAK++ L+YI LDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 227 EMEDLTQLDPLEVEAKKYGLNYIKLDGNIGCMVNGAGLAMTTMDIIKLAGGNPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +++A AF+I+ +D +VK + INIFGGI+RCD L  G++ A K V I++P+V+R+E
Sbjct: 287 GGASVEQIANAFRILMADPNVKAVFINIFGGILRCDRLASGLIEAAKMVDISVPVVVRME 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G R++AESGL  +TA D+ D A+K V   
Sbjct: 347 GTNVEEGKRMLAESGLRFVTAEDMWDGARKAVELA 381


>gi|221134283|ref|ZP_03560588.1| succinyl-CoA synthetase subunit beta [Glaciecola sp. HTCC2999]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L R+Y +PV++G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFREYGLPVSEGFAAGTAQEAVEAADRIGGDEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++      + +     LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKQKDEIAAFAENWLGKNLVTYQTDEAGQPVTKILVESCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE VA++ P+KI K  IDPL+G        +   L L+
Sbjct: 111 GAVVDRATRSIVFMASTEGGVEIETVAEETPEKILKAAIDPLVGAQPYQAREIAFALGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F + D++L+EINPL+I  +G L  LD+K++ D NA+YR   +Q
Sbjct: 171 GVQIRQFTTIFMGLAKMFEELDVALIEINPLVIKADGDLHCLDAKVAIDGNAMYRQPKLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAAWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGL++I A  L DAAQK+V A +G
Sbjct: 351 GTNALLGREVLANSGLDIIAAESLTDAAQKVVAAAEG 387


>gi|328473393|gb|EGF44241.1| succinyl-CoA synthetase subunit beta [Vibrio parahaemolyticus
           10329]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITAEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|28897623|ref|NP_797228.1| succinyl-CoA synthetase subunit beta [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838592|ref|ZP_01991259.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus AQ3810]
 gi|260365988|ref|ZP_05778473.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           K5030]
 gi|260878222|ref|ZP_05890577.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AN-5034]
 gi|260895659|ref|ZP_05904155.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           Peru-466]
 gi|260901287|ref|ZP_05909682.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AQ4037]
 gi|33301644|sp|Q87RE8|SUCC_VIBPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|28805835|dbj|BAC59112.1| succinyl-CoA synthase, beta subunit [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748010|gb|EDM58869.1| succinyl-CoA synthetase beta chain [Vibrio parahaemolyticus AQ3810]
 gi|308088163|gb|EFO37858.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           Peru-466]
 gi|308090122|gb|EFO39817.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AN-5034]
 gi|308109839|gb|EFO47379.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           AQ4037]
 gi|308111253|gb|EFO48793.1| succinyl-CoA synthetase, beta subunit [Vibrio parahaemolyticus
           K5030]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITAEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|320168660|gb|EFW45559.1| Suclg2 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 424

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 183/399 (45%), Positives = 249/399 (62%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKG 57
           +N+HEYQ+K LL    V   +  V  +   A+   + L       +V+K+QIHAGGRGKG
Sbjct: 28  LNLHEYQSKELLAAAGVTTQRFKVAKTPAEAKDIAQWLKSNSVHEFVIKAQIHAGGRGKG 87

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F    +  KGGV++      V     +++G  L+TKQT P G  VN + V +  DI  E
Sbjct: 88  TF---SSGFKGGVQLTKDPNVVGDLASKMIGYNLVTKQTPPAGVPVNKLMVAEALDIASE 144

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y ++++DR S     +AS QGG+DIEEVA   P+ IFK  +   +GVTSE    L   L
Sbjct: 145 KYFAIVLDRESQGPVLVASPQGGVDIEEVAAKTPELIFKEPVKIAVGVTSEQALRLAKNL 204

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              G       D    LY  F   D S +EINP+    +GR+   D+K++ DDNA +R  
Sbjct: 205 GFTGAKATSAADQIRRLYDLFIKNDASQVEINPMGETPDGRVVCFDAKVNIDDNAEFRQK 264

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            + E RD +E+D RE+EA +  L+Y+ ++GNIGC+VNGAGLAMATMDIIKL+GG PANFL
Sbjct: 265 TLFEQRDTTEDDPREVEATKAGLNYVGMEGNIGCLVNGAGLAMATMDIIKLFGGQPANFL 324

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGG   + +VA AFKIITSD  VK +L+NIFGGI+ C  +  GI++A K   +++PLV+
Sbjct: 325 DVGGSVKEAQVAQAFKIITSDPQVKALLVNIFGGIVNCATIANGIVAACKTTNLSLPLVV 384

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RLEG NVD   +++ ESGL +ITA +L+DAAQK V A+K
Sbjct: 385 RLEGTNVDNAKKILKESGLPIITAENLNDAAQKAVAALK 423


>gi|312884954|ref|ZP_07744644.1| succinyl-CoA synthetase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367431|gb|EFP94993.1| succinyl-CoA synthetase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAAEAAGRITTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +    + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDDKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGDMFAKHDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G +++A S +++I A  L DAAQK+V A +G
Sbjct: 351 GTNADLGRQVLANSDVDIIAAESLTDAAQKVVAAAEG 387


>gi|270157991|ref|ZP_06186648.1| succinyl-CoA synthetase subunit beta [Legionella longbeachae
           D-4968]
 gi|269990016|gb|EEZ96270.1| succinyl-CoA synthetase subunit beta [Legionella longbeachae
           D-4968]
          Length = 397

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 198/386 (51%), Positives = 257/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  KYN+PV  G V  SV  A      L    +VVK+Q+HAGGRGK    
Sbjct: 12  MNLHEYQAKQLFAKYNLPVPNGQVAYSVDDALQVASQLSTNRWVVKAQVHAGGRGKA--- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V ++   + S ++ +LG+ L+T QT   G  VN V +E+  DI RELYL
Sbjct: 69  -------GGVKVVANKDELASVVKSLLGTRLVTYQTDAQGQPVNAVLIEETCDIGRELYL 121

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA++ P KIFK+++DPL+GV           L LQ
Sbjct: 122 GAVVDRATRRVVIMASTEGGVEIEKVAEETPDKIFKIIVDPLVGVMPFQCREAGFKLGLQ 181

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL++ ++G+L  LD KI+ D NALYR   ++
Sbjct: 182 DDQIKQFTHLMMGLGKMFVECDLSLLEINPLVVSQSGQLICLDGKINIDGNALYRQPQLK 241

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE  A    L+YI LDG IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 242 SLRDASQEDERENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGDPANFLDVG 301

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 302 GGATKERVSEALKIIISDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 361

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N  +G  ++ +S LNVI A  L D
Sbjct: 362 GNNAQLGADILNKSDLNVIAATSLTD 387


>gi|261252266|ref|ZP_05944839.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio orientalis CIP
           102891]
 gi|260935657|gb|EEX91646.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio orientalis CIP
           102891]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTPQEAFEAAGRITTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG+DIE++A++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASRKIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|89095246|ref|ZP_01168168.1| succinyl-CoA synthetase subunit beta [Oceanospirillum sp. MED92]
 gi|89080500|gb|EAR59750.1| succinyl-CoA synthetase subunit beta [Oceanospirillum sp. MED92]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEAAEKIGGDKWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S           LG  L+T QT   G  V+ + VED  DI  ELYL
Sbjct: 58  -------GGVKLVDSPAEAQEFAANWLGKNLVTYQTDANGQPVSKILVEDCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA++ P+KI K  +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVEIEKVAEETPEKILKATVDPLTGAQPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F +KD++LLEINPL+I + G L  LD+K++ D NA+YRH D+Q
Sbjct: 171 GDQIKQFVKIFLGLAQMFQEKDLALLEINPLVITEEGNLHCLDAKVAIDGNAVYRHKDLQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED RE  A + +L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMEDPSQEDEREARAAEWDLNYVALDGSIGCMVNGAGLAMGTMDIVSLHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII  D  VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILEDDKVKAVLVNIFGGIVRCDLIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G++L++ESGL++I A  L DAA + V A +G
Sbjct: 351 GNNAELGSQLLSESGLDIIAATSLTDAAVQAVKAAEG 387


>gi|126336285|ref|XP_001372226.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 476

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 170/395 (43%), Positives = 240/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V  + + A +A K L     V+K+QI AGGRGKG F 
Sbjct: 82  LNLQEYQSKKLMSEHGVKVQRFFVADTANDALNAAKRLNAKEIVLKAQILAGGRGKGTF- 140

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V + +  DI RE YL
Sbjct: 141 --NSGLKGGVHLTKDPKVVGQLAQQMIGYNLTTKQTPKDGVKVNKVMIAEALDISRETYL 198

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L  +
Sbjct: 199 AILMDRSCNGPVLVGSPQGGVDIEEVAATTPELIFKEEIDIFEGIKDSQAERMAENLGFR 258

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 259 GALKTQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 318

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 319 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 378

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 379 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPLVVRLE 438

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A DL+DAA+K V +V
Sbjct: 439 GTNVQEAQNILNNSGLPITSASDLEDAAKKAVASV 473


>gi|260772361|ref|ZP_05881277.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio metschnikovii
           CIP 69.14]
 gi|260611500|gb|EEX36703.1| succinyl-CoA ligase [ADP-forming] beta chain [Vibrio metschnikovii
           CIP 69.14]
          Length = 388

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTVKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S  +V +  ++ LG  L+T QT   G  V+ + VE+ + I  ELYL
Sbjct: 58  -------GGVELHESKDAVKAFAQKWLGKNLVTYQTDTNGQPVSKILVEEASSIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L LQ
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGAQAYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLSEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++ED+RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDATQEDAREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+K+V A +G
Sbjct: 351 GTNAELGRDVLAKSGLDIIAAESLTDAARKVVAAAEG 387


>gi|73540236|ref|YP_294756.1| succinyl-CoA synthetase subunit beta [Ralstonia eutropha JMP134]
 gi|123625816|sp|Q475M1|SUCC_RALEJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|72117649|gb|AAZ59912.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ralstonia
           eutropha JMP134]
          Length = 389

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 196/386 (50%), Positives = 266/386 (68%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVAEALKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V +    ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDDVKTYATNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +A +AS++GGMDIEEVA   P+KI  L+I+P  G+T  D   +   + + 
Sbjct: 111 SLVVDRVSQKIALMASSEGGMDIEEVAAHTPEKIHTLIIEPSTGLTDADADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF D D SL EINPLI+   G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASVAQARQALQGLYKAFYDTDASLAEINPLILTGEGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +V+ IL+NIFGGIMRCDV+ +G++SA K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNVEAILVNIFGGIMRCDVIAEGVISASKAVNLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTMEE 376


>gi|269960711|ref|ZP_06175083.1| succinyl-CoA synthetase subunit beta [Vibrio harveyi 1DA3]
 gi|269834788|gb|EEZ88875.1| succinyl-CoA synthetase subunit beta [Vibrio harveyi 1DA3]
          Length = 388

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRITTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGTMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|241662076|ref|YP_002980436.1| succinyl-CoA synthetase subunit beta [Ralstonia pickettii 12D]
 gi|309779742|ref|ZP_07674499.1| succinyl-CoA synthetase beta chain (SCS-beta) [Ralstonia sp.
           5_7_47FAA]
 gi|240864103|gb|ACS61764.1| succinyl-CoA synthetase, beta subunit [Ralstonia pickettii 12D]
 gi|308921481|gb|EFP67121.1| succinyl-CoA synthetase beta chain (SCS-beta) [Ralstonia sp.
           5_7_47FAA]
          Length = 388

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 196/384 (51%), Positives = 263/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKYNVPV +G+   SV  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MNIHEYQGKEILRKYNVPVPRGIPAFSVDEAIKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V      ILG TL+T QTGP G  V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVKEYASSILGMTLVTHQTGPEGKLVKRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  VA +AS++GGMDIEEVA+ +P+KI  LLIDP  G+       +   + + 
Sbjct: 111 SLVVDRVSQQVALMASSEGGMDIEEVAESHPEKIHTLLIDPQAGLQDAQADDIARKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKAF + D S  EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIAQARQALQGLYKAFWETDASQAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDVKAILVNIFGGIMRCDVIAEGVIAAAKAVSLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N D+G +++A+SGL +I A  +
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTM 374


>gi|254498639|ref|ZP_05111357.1| succinyl CoA synthetase beta chain [Legionella drancourtii LLAP12]
 gi|254352087|gb|EET10904.1| succinyl CoA synthetase beta chain [Legionella drancourtii LLAP12]
          Length = 386

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 193/386 (50%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   YN+PV  G V  +V  A      L    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFASYNLPVPHGEVAYNVEDALQVASQLSTTRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   + + ++ +LG+ L+T QT   G  VN V VE+  +I RELYL
Sbjct: 58  -------GGVKLVSNKDELAAAVKALLGTRLVTYQTDAHGQPVNAVLVEETCEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V  +AST+GG++IE+VA++ P+KIFK+++DPL+GV           L L 
Sbjct: 111 GAVVDRATRRVVIMASTEGGVEIEKVAEETPEKIFKVVVDPLVGVMPFQAREAGFKLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   L K F + D+SLLEINPL++ + G+L  LD KI+ D NALYR   ++
Sbjct: 171 DAQIKQFTHLMLGLGKMFVECDLSLLEINPLVVTQAGQLICLDGKINIDGNALYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED RE  A    L+YI LDG+IGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 SMRDTSQEDERENRASDWELNYIPLDGSIGCMVNGAGLAMATMDVIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ A KII SD  VKGIL+NIFGGI+RCD++  GIL+AVKEV + IP+V+RLE
Sbjct: 291 GGATKERVSEALKIILSDDKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N  +G  ++ +S LNVI A  L D
Sbjct: 351 GNNAQLGADILNKSDLNVIAATSLTD 376


>gi|126174726|ref|YP_001050875.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS155]
 gi|153001025|ref|YP_001366706.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS185]
 gi|160875738|ref|YP_001555054.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS195]
 gi|217973015|ref|YP_002357766.1| succinyl-CoA synthetase subunit beta [Shewanella baltica OS223]
 gi|304409103|ref|ZP_07390724.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS183]
 gi|307303106|ref|ZP_07582861.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica BA175]
 gi|189081799|sp|A3D5J3|SUCC_SHEB5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081800|sp|A6WPA4|SUCC_SHEB8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081801|sp|A9L532|SUCC_SHEB9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778451|sp|B8E770|SUCC_SHEB2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|125997931|gb|ABN62006.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           baltica OS155]
 gi|151365643|gb|ABS08643.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS185]
 gi|160861260|gb|ABX49794.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS195]
 gi|217498150|gb|ACK46343.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS223]
 gi|304352924|gb|EFM17321.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS183]
 gi|306913466|gb|EFN43888.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica BA175]
 gi|315267927|gb|ADT94780.1| succinyl-CoA synthetase, beta subunit [Shewanella baltica OS678]
          Length = 388

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I   +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQPKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAATSLTDAAEQVVKAAEG 387


>gi|117920159|ref|YP_869351.1| succinyl-CoA synthetase subunit beta [Shewanella sp. ANA-3]
 gi|189081806|sp|A0KVX6|SUCC_SHESA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117612491|gb|ABK47945.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella sp.
           ANA-3]
          Length = 388

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 190/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G L+VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQAKIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGL++I A  L DAA+++V A +G
Sbjct: 351 GTNAELGREVLAKSGLDIIAANSLTDAAEQVVKAAEG 387


>gi|170084845|ref|XP_001873646.1| succinyl-coa synthetase beta chain, SSC-beta [Laccaria bicolor
           S238N-H82]
 gi|164651198|gb|EDR15438.1| succinyl-coa synthetase beta chain, SSC-beta [Laccaria bicolor
           S238N-H82]
          Length = 416

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 173/396 (43%), Positives = 247/396 (62%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K V  +S   A +A         V+K+Q+ AGGRGKG+F 
Sbjct: 23  LSIHEYQSMKLLNLYGIPTPKSVAATSPQEAYAAASNFGKDKLVIKAQVLAGGRGKGKFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV +  S +       +++GS LITKQTG  G   N + + +      E Y+
Sbjct: 83  N---GFQGGVHMVDSPEQAKEIASKMIGSKLITKQTGEHGRICNAIMLAERRQPAHEYYV 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +  V  +AS QGGM+IEEVA   P  I    ID   G++ ++  S+   L  Q
Sbjct: 140 AVLNDRATQGVVLVASAQGGMNIEEVAAKNPSAIITTPIDFEKGLSKDEAISVAKKLGFQ 199

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             + + +  D+F NLY+ F +KD + +EINP+ +  +G +  +D+K  FDDNA +R  DI
Sbjct: 200 TDKTQSEAADIFINLYRIFKEKDATQIEINPMALTTDGEVLCMDAKFGFDDNAEFRQKDI 259

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD+S+E+  E+EA++ NLS+I LDG+IGC+VNGAGLAMATMD++ L+GG PANFLDV
Sbjct: 260 FALRDISQEEPSEVEAQKANLSFIKLDGSIGCLVNGAGLAMATMDVLSLHGGNPANFLDV 319

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V  AF+I+  D  VK I INIFGGIMRCD + +G++ A KE+ + IPL++RL
Sbjct: 320 GGGATPETVKKAFEILLQDPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLTIPLIVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +G       ++I ESGL ++    LDDAA+K V   
Sbjct: 380 KGTKEAEAKQMIRESGLKIVAFDSLDDAAEKAVQLA 415


>gi|255936143|ref|XP_002559098.1| Pc13g06650 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583718|emb|CAP91734.1| Pc13g06650 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 443

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 255/398 (64%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V +G V  +   AE+  K++ G   V+K+Q+ AGGRGKG+F 
Sbjct: 33  LSIHEYLSARLLKSYGVGVPQGDVAKTAEEAETIAKSIGGDDLVIKAQVLAGGRGKGQFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLVTKQTGAAGRICNSVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT+     ++S+QGGMDIE VAK+ P  I    ID  +GVT E   ++   L   
Sbjct: 150 AVLLDRTTRGPVIVSSSQGGMDIEAVAKESPDAIMTTPIDIHVGVTDEIARTIATDLGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +      NLYK F ++D + LEINPL    + ++  +D+K+ FDDNA +R  +  
Sbjct: 210 EQCIEEAKSTIQNLYKCFMERDATQLEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEAF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RDV++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 270 SWRDVTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  + +NIFGGI+RCD + +G+++ V+E+ +  P++ RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVSAVFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIIARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI ESGL + +  DL +AA+K V   K V
Sbjct: 390 GTNMEQAHKLINESGLKIFSIEDLQNAAEKSVQFSKVV 427


>gi|262276212|ref|ZP_06054021.1| succinyl-CoA ligase [ADP-forming] beta chain [Grimontia hollisae
           CIP 101886]
 gi|262220020|gb|EEY71336.1| succinyl-CoA ligase [ADP-forming] beta chain [Grimontia hollisae
           CIP 101886]
          Length = 388

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 182/385 (47%), Positives = 257/385 (66%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K L  +Y +PV++G    +   A  A   L G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQLFAEYGLPVSEGYACDTPQEAAEAADKLGGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ + +    ++ LG  L+T QT   G  V+ + VE+  DI +ELYL
Sbjct: 58  -------GGVKLVSTKEEIKEFAQKWLGKNLVTYQTDANGQPVSKILVEECTDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRQLAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  +   F ++D++L+E+NPL+I + G L  LD+K+S D NA+YR   I+
Sbjct: 171 GDQVKQFTKIFMGIATLFIERDVALVEVNPLVITEQGNLHCLDAKLSIDSNAVYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 EMHDPSQDDPREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G + +AESGLN+I A  L 
Sbjct: 351 GNNAELGAKKLAESGLNIIAATSLT 375


>gi|241206657|ref|YP_002977753.1| succinyl-CoA synthetase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860547|gb|ACS58214.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 397

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 257/397 (64%), Positives = 323/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DV ++   L+L 
Sbjct: 121 SILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIHTIAIDPEAGVTAADVVAISKALQLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+MK+G LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKTLFPTLYKAFGEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 TLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|251772185|gb|EES52755.1| succinyl-CoA synthetase, beta subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 395

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 202/403 (50%), Positives = 264/403 (65%), Gaps = 16/403 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG------PLYVVKSQIHAGGR 54
           MNIHEYQAK L R Y V V  GVV+ S   A   I    G       +Y VK+QIHAGGR
Sbjct: 1   MNIHEYQAKELFRSYGVAVPSGVVVDSPEEARRLISEKSGIFSGSSAVYAVKAQIHAGGR 60

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           GK           GGV++  S+  +   +  +LG TL+T QTGP G  V  V++E+GA I
Sbjct: 61  GKA----------GGVKIAKSVSEIPGYVEALLGKTLVTHQTGPEGRLVRKVWIEEGAQI 110

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            RE YLSL++DR+S  ++ +AST+GGM+IEEV+  +P+KI  L +DP +G  S     + 
Sbjct: 111 AREFYLSLVLDRSSRRISILASTEGGMEIEEVSAAHPEKILTLSVDPEMGCKSFVGRRVA 170

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
             L L          L  NLY+ F D D  ++EINPLI   +GRL  LD+K+SFDDNALY
Sbjct: 171 SFLGLPITLYGSFSTLLANLYRFFLDTDCMMVEINPLIQTGDGRLLALDAKVSFDDNALY 230

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R   I  LRD+ EE+  EIEA +H L+Y+ LDG+I CMVNGAGLAMATMD+I L GG PA
Sbjct: 231 RQEKILALRDLFEENELEIEASKHRLNYVKLDGSIACMVNGAGLAMATMDVIALAGGTPA 290

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA ++ V  AF+I+  D  VKGI +NIFGGI+RC+ +  GI++A K+VK+++P
Sbjct: 291 NFLDVGGGASKETVEQAFRILLGDPEVKGIFVNIFGGIVRCERIAGGIIAAAKDVKLHVP 350

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           LV+RL+G N   G  ++ ESGL++  A +L + AQKIV AVKG
Sbjct: 351 LVVRLQGTNAKEGREMLRESGLDLQVAEELFEGAQKIVQAVKG 393


>gi|239817449|ref|YP_002946359.1| succinyl-CoA synthetase, subunit beta [Variovorax paradoxus S110]
 gi|239804026|gb|ACS21093.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus S110]
          Length = 389

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/396 (47%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY VP  +G    S   A  A   L G  +VVK+QIHA         
Sbjct: 1   MNIHEYQGKDVLRKYGVPTPRGYACFSPDEAADAAAQLGGRAWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S   V     E+LG TL T QTGP G  V  + VE+  +I +E YL
Sbjct: 52  -GGRGKGGGVRLAWSAAEVRRHADELLGMTLRTHQTGPQGRLVKRLLVEESVEIEKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + VDR S  VA +AS++GGMDIE+VA   P+KI KL +DP  GV + +   L   +   
Sbjct: 111 GMAVDRESRRVALMASSEGGMDIEDVAARTPEKIRKLFVDPSTGVKAVEADGLARDIGFS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L  NLY+AF   D SL EINPL + ++GR+  LD+K +FD NAL+R  +I 
Sbjct: 171 GKLLPQVRTLVQNLYQAFDACDASLAEINPLALTRDGRVLALDAKFNFDPNALFRQPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EED  E+EA + +LSYIAL+G+IGC+VNGAGLAMATMD IKLYGG+PANFLDVG
Sbjct: 231 AMRDLDEEDPAEVEASKFDLSYIALEGDIGCLVNGAGLAMATMDAIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +++ IL+NIFGGIM+CDV+ +G+++A +EV++ +PLV+R++
Sbjct: 291 GGATAEKVTEAFKLMLRNPNLRAILVNIFGGIMKCDVIARGVVAAAREVQLAVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N  +G  ++ +SGL +I+A D+ +AA  +V A +
Sbjct: 351 GTNESLGKTILGQSGLRIISADDMAEAAGLVVAAAR 386


>gi|297183589|gb|ADI19716.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 386

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 289/396 (72%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY V V KGV   +V      +K+L    +V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGVVVPKGVFAFTVDELIEKVKSLKTEKFVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +++  +    +E+LG  LIT QTGP G  V  +YVE+   I +E YL
Sbjct: 58  -------GGVKILNNIDELTKASKELLGKRLITPQTGPEGKEVKRLYVEESTSIEKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR+S  +AFI+S QGGMDIEEVAK+ P+KI    ++    ++S+D   +  +  L+
Sbjct: 111 SCLVDRSSSKIAFISSDQGGMDIEEVAKNNPKKITTTKVNFNEDISSKDCEEIIKIFNLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G ++++   L  ++YK F   D SL+EINPLI+ K+ ++  LD+K++FDDN+L+RH DI 
Sbjct: 171 GNSKLEAISLIQSIYKMFLSTDASLVEINPLILTKDQKIVCLDAKVNFDDNSLFRHPDIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRDV+EED  EIEA +H+L+Y+ LDG+IGCMVNGAGLAMATMDIIK+YG  PANFLDVG
Sbjct: 231 KLRDVNEEDPTEIEASKHDLAYVKLDGSIGCMVNGAGLAMATMDIIKIYGEEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV++AFKII SD +VKGILINIFGGIMRCDVL +G++ A KE+KIN+PLV+RL 
Sbjct: 291 GGASKEKVSSAFKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEIKINVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++  SGL +I+A +LDDAA+K++ A+K
Sbjct: 351 GTNFEEGKKILNNSGLKIISADNLDDAAKKVIGAIK 386


>gi|253998617|ref|YP_003050680.1| succinyl-CoA synthetase subunit beta [Methylovorus sp. SIP3-4]
 gi|253985296|gb|ACT50153.1| succinyl-CoA synthetase, beta subunit [Methylovorus sp. SIP3-4]
          Length = 392

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 208/395 (52%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+LL++Y +P+ +  V  +  +A  A K++ G  +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKSLLQRYGLPIPQSQVAENPQSAVEAAKSIGGDAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V +    +LG  L+T Q  P G  V  V VE    I RELYL
Sbjct: 58  -------GGVKVVKSYEDVEAVAASLLGKPLVTYQNAPDGQPVLQVLVEQTLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+   V  +AS  GGMDIE++A   P+KI + + DPL G+      +L   L L 
Sbjct: 111 SLLVDRSLERVVMVASAAGGMDIEDIAATQPEKILQEVCDPLNGLVDFQARNLAFGLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F + D++LLEINPL++   G L  LD K+S DDNALYR   + 
Sbjct: 171 GEQIAAFVRLAKGLYKLFKENDLALLEINPLVVTAEGALVALDCKMSVDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S++D++E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GGAPANFLDVG
Sbjct: 231 EQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    VA AFKII +DS+VK IL+NIFGGIMRCD++ +GI++AVKEV I IP+V+RLE
Sbjct: 291 GGATAATVARAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIQIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G ++++ESGL++I+A  L DAAQ+ V AV
Sbjct: 351 GTNVELGRKMLSESGLSIISAAGLTDAAQQAVRAV 385


>gi|212635734|ref|YP_002312259.1| succinyl-CoA synthetase subunit beta [Shewanella piezotolerans WP3]
 gi|226734989|sp|B8CR00|SUCC_SHEPW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|212557218|gb|ACJ29672.1| Succinyl-CoA synthetase, beta subunit [Shewanella piezotolerans
           WP3]
          Length = 388

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 256/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAENWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATQRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D+G  ++A S L++I A  L DAA+++V A + 
Sbjct: 351 GTNADLGREVLANSDLDIIAATSLTDAAEQVVKAAES 387


>gi|121714307|ref|XP_001274764.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402918|gb|EAW13338.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           clavatus NRRL 1]
          Length = 453

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 43  LSIHEYLSARLLKSYGVGVPKGEVARSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 102

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 103 N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 159

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P+ I    I+  +GVT +    +   L   
Sbjct: 160 AILMDRATQSPVIVSSSQGGMDIEAVAKENPEAIITTPININVGVTDDIARKIATDLGFS 219

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLY+ F +KD + +EINPL    + ++  +D+K+ FDDNA +R  D+ 
Sbjct: 220 EQCIEDAKTTIQNLYRVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKDVF 279

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 280 SWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 339

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  + +NIFGGI+RCD + +G+++ V E+ + IP+V RL+
Sbjct: 340 GGATPAAIKSAFELITSDPKVTAVFVNIFGGIVRCDAIAQGLINVVHEMDLRIPIVARLQ 399

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI ESGL + +  DL  AA+K V   K V
Sbjct: 400 GTNMEQAQKLINESGLKIFSIEDLQSAAEKSVQFSKVV 437


>gi|297623491|ref|YP_003704925.1| succinyl-CoA synthetase subunit beta [Truepera radiovictrix DSM
           17093]
 gi|297164671|gb|ADI14382.1| succinyl-CoA synthetase, beta subunit [Truepera radiovictrix DSM
           17093]
          Length = 407

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 216/409 (52%), Positives = 282/409 (68%), Gaps = 15/409 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQAK L++   V V +G V  +V  A +A++ L      P+ V+KSQIHAGGRGK
Sbjct: 1   MNIHEYQAKELMQARGVAVPQGAVARTVEEAVAAVRPLVEATGNPVVVLKSQIHAGGRGK 60

Query: 57  GRFKELPA---------DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
           GRFKE P            KGGVR   + + V    + +LGSTL+T QTG +G +VN +Y
Sbjct: 61  GRFKEHPEVAGVNVITDGLKGGVRA--TEERVRELAKAMLGSTLVTVQTGESGKQVNRLY 118

Query: 108 VEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           +E G DI RELYLS+++DR  G    +AST+GG++IEEVA+  P+KI +  IDPL+G+ +
Sbjct: 119 IEQGIDIGRELYLSVVLDRAVGRNVMMASTEGGVEIEEVAERSPEKILREHIDPLVGLAN 178

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
              A L   L L G A  +G      L KA  + D  ++EINPL++ K G++  LD K+S
Sbjct: 179 FQAARLAHGLGLTGDALKNGVRFMRALAKAAEELDTDMIEINPLVVTKQGQVMALDGKMS 238

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           FD+NAL+RH  + E+RD SEED  E+EA  + LS+I LDG IGC+VNGAGLAMATMDIIK
Sbjct: 239 FDNNALFRHKMVAEMRDTSEEDPAELEASNYGLSFIKLDGTIGCLVNGAGLAMATMDIIK 298

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
             GG PANFLDVGGGA  + V AAFKIIT D +V+GI +NIFGGIM+CD +  G++ AV+
Sbjct: 299 HVGGEPANFLDVGGGATTENVTAAFKIITKDPNVRGIFVNIFGGIMKCDTIANGVVEAVR 358

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +V + +PLV+RLEG NVD+G R+I ESGLNV++A D+ D AQKIV   K
Sbjct: 359 QVGLEVPLVVRLEGTNVDLGKRIIDESGLNVVSAKDMKDGAQKIVELAK 407


>gi|313200691|ref|YP_004039349.1| succinyl-CoA synthetase subunit beta [Methylovorus sp. MP688]
 gi|312440007|gb|ADQ84113.1| succinyl-CoA synthetase, beta subunit [Methylovorus sp. MP688]
          Length = 392

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 209/395 (52%), Positives = 271/395 (68%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+LL++Y +P+ +  V  +  +A  A K++ G  +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKSLLQRYGLPIPQSQVAENPQSAVEAAKSIGGDAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + V +    +LG  L+T Q  P G  V  V VE    I RELYL
Sbjct: 58  -------GGVKVVKSYQDVEAVAASLLGKPLVTYQNAPDGQPVLQVLVEQTLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+   V  +AS  GGMDIEE+A   P+KI + + DPL G+      +L   L L 
Sbjct: 111 SLLVDRSLERVVMVASAAGGMDIEEIAATQPEKILQEVCDPLNGLVDFQARNLAFGLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LYK F + D++LLEINPL++   G L  LD K+S DDNALYR   + 
Sbjct: 171 GEQIAAFVRLAKGLYKLFKENDLALLEINPLVVTAEGALVALDCKMSVDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S++D++E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GGAPANFLDVG
Sbjct: 231 EQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    VA AFKII +DS+VK IL+NIFGGIMRCD++ +GI++AVKEV I IP+V+RLE
Sbjct: 291 GGATAATVARAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIQIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G ++++ESGL++I+A  L DAAQ+ V AV
Sbjct: 351 GTNVELGRKMLSESGLSIISAAGLTDAAQQAVRAV 385


>gi|54261767|ref|NP_998191.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Danio rerio]
 gi|37748067|gb|AAH59701.1| Succinate-CoA ligase, ADP-forming, beta subunit [Danio rerio]
          Length = 466

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 169/398 (42%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V S+   A +A K +     V+K+Q+ AGGRGKG F+
Sbjct: 56  LSLHEYMSIGLLKEAGISVPAGMVASTPDEAYTAAKQIGSKDLVIKAQVLAGGRGKGTFE 115

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S +       +++G  L TKQTG  G   N V+V +     RE Y 
Sbjct: 116 ---GGLKGGVRIVYSPEEARDISSKMIGKKLFTKQTGEAGRICNQVFVCERRYPRREYYF 172

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  +    + + +   
Sbjct: 173 AITMERSYQGPVLIGSSQGGVNIEDVAAENPDAIVKEPIDIVEGIKMDQAIKVAEKMGFP 232

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D S++EINP++   +G +  +D+KI+FD NA YR   + 
Sbjct: 233 PALINEAAENMLKLYDVFIKYDASMVEINPMVEDSSGIVMCMDAKINFDSNAAYRQKKVF 292

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD S+ED+R+ +A + +L+YI LDG IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 293 DMRDWSQEDARDRQAAKADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 352

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AV ++ + IP+V+RL+
Sbjct: 353 GGATAQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVTDLDLKIPIVVRLQ 412

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA S L ++   DLD+AA+ +V   + V
Sbjct: 413 GTRVDDAKALIAASPLKILACDDLDEAAKMVVKLSEIV 450


>gi|67459057|ref|YP_246681.1| succinyl-CoA synthetase subunit beta [Rickettsia felis URRWXCal2]
 gi|75536509|sp|Q4ULQ7|SUCC_RICFE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67004590|gb|AAY61516.1| Succinyl-CoA synthetase beta chain [Rickettsia felis URRWXCal2]
          Length = 386

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRLASCITFIASTEGGVDIEEVAEKTPEKIVKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFVETDAAQIEINPLIVQTDGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|83952285|ref|ZP_00961017.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
 gi|83837291|gb|EAP76588.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
          Length = 396

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/396 (45%), Positives = 254/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL+++ V V +G +  S   A    + L G   VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLKRFGVNVPRGGIAYSPEQAVYRAQELSGDKCVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV SS + +      +LG  L+T QTGP G  V  +YVE+  DI +E+YL
Sbjct: 58  -------GGVRVCSSDEEIADAASWMLGRKLVTHQTGPQGKLVGRLYVEEATDIRQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DRT   V  +AS QGGM+IE+++ + P  I + ++DP +G+ +     +   L L 
Sbjct: 111 GFVMDRTEERVVVVASAQGGMEIEDISANEPDSIIRSVVDPAVGMQAFQAREIAFQLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         YK     D S+LEINPL++  +G +  LD K+SFDDNAL+RH +I 
Sbjct: 171 PSLIAQASKTITGAYKMMDQLDASMLEINPLVVTGSGEIVALDCKVSFDDNALFRHPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED+RE  A    L+YI L+G IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDARETYAGDRGLNYIGLEGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  +FK + +D +V+ +L+NIF GI RCD + +G++ AV+E+ + +PLV+RL 
Sbjct: 291 GGASPERVLMSFKAVLNDPNVEAVLVNIFAGINRCDWIAEGVVRAVQELDLKLPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++AES LN+ TA  L +AA+K+V A +
Sbjct: 351 GTNVEEGRKILAESDLNITTAETLAEAAEKVVSAWR 386


>gi|195953300|ref|YP_002121590.1| succinyl-CoA synthetase, beta subunit [Hydrogenobaculum sp.
           Y04AAS1]
 gi|226734959|sp|B4U901|SUCC_HYDS0 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|195932912|gb|ACG57612.1| succinyl-CoA synthetase, beta subunit [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 382

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 261/396 (65%), Gaps = 14/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+Q+K LL+KY +PV +G    +V  A+ A + L G   VVK+QIH G RGK    
Sbjct: 1   MKLHEHQSKELLKKYGLPVPEGYAAFNVKEAKEAAQALGGYPLVVKAQIHCGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + + +    ILG  L T Q  P G  V+ + +E    I +E YL
Sbjct: 58  -------GGVKIVKSDEELEAFSEAILGKILKTVQC-PNGKVVSRLLIEKATPIEKEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR++  +  +AS +GGM+IEE++K+ P  I K  +DP++G+       L   L L 
Sbjct: 110 SITLDRSNSKILIMASKEGGMEIEELSKEKPDAIIKEYVDPVLGIMPYQTRKLSFALGLN 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                  G +   LY+A+ D D SLLEINPL++ K+G + +LD+K+  DDNA +RH DI+
Sbjct: 170 PSL---FGKIVSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAFRHKDIE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D+++ D  E+EAK++ L+YI L+GNIGCMVNGAGLAM TMDIIKL GGAPANFLDVG
Sbjct: 227 ELEDITQIDPLEVEAKKYGLNYIKLEGNIGCMVNGAGLAMTTMDIIKLAGGAPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +++A AF+I+TSD +VK + INIFGGI+RCD L  G++ A K V I IP+V+RLE
Sbjct: 287 GGASVEQIANAFRILTSDENVKAVFINIFGGILRCDRLANGLIEAAKIVNIKIPVVVRLE 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ ESGLN  +A+D+ D AQK +   +
Sbjct: 347 GTNVEEGRKLLKESGLNFESAVDMWDGAQKAIKLAQ 382


>gi|56476116|ref|YP_157705.1| succinyl-CoA synthetase subunit beta [Aromatoleum aromaticum EbN1]
 gi|81358330|sp|Q5P7A7|SUCC_AZOSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56312159|emb|CAI06804.1| Succinyl-CoA synthetase, beta chain [Aromatoleum aromaticum EbN1]
          Length = 386

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLRKY V   +G    SV  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRKYGVVTPRGFHTVSVDGAVKAAEELGGKIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG  L+T QTGP G +V  + +E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQHASDILGMQLVTHQTGPEGQKVRNLLIEEGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA   P+KI K  +DPL+G+T     +L   + + 
Sbjct: 111 AALTDRATQKVAIMASSEGGMDIEEVAHSTPEKILKEFVDPLVGLTDAQAENLARGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D    LY  + + D SL EINPLI+  NG ++ LD+K +FD NALYRH +I 
Sbjct: 171 EASVAKAVDALKRLYTCYMETDASLAEINPLILEGNGNIKALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + RD  EED+ EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G  PANFLDVG
Sbjct: 231 DFRDFDEEDADEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A KEV +++PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVVAAAKEVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I A  + +AA KIV AVK
Sbjct: 351 GTNEDLGKKILAESGLPIIAADTMAEAATKIVAAVK 386


>gi|83721087|ref|YP_441202.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           E264]
 gi|167579959|ref|ZP_02372833.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           TXDOH]
 gi|167621352|ref|ZP_02389983.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           Bt4]
 gi|257140132|ref|ZP_05588394.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           E264]
 gi|123537945|sp|Q2T0U7|SUCC_BURTA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83654912|gb|ABC38975.1| succinyl-CoA synthase, beta subunit [Burkholderia thailandensis
           E264]
          Length = 388

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 259/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYANQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P  G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSTGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|52425407|ref|YP_088544.1| succinyl-CoA synthetase subunit beta [Mannheimia succiniciproducens
           MBEL55E]
 gi|81386979|sp|Q65SV1|SUCC_MANSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52307459|gb|AAU37959.1| SucC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 388

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/397 (49%), Positives = 274/397 (69%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV++G    S+  A  A+K L G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYGLPVSEGCACQSLEEAIQAVKKLGGGQWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V S   + LG  L+T QT   G  VN +Y+E  A++ +ELYL
Sbjct: 58  -------GGVKLVKSEEEVRSFFEKFLGQRLVTFQTDAKGQPVNAIYMEACANVKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  + F+ ST+GG++IEEVA+  P  + K+ IDPL+G        L   L LQ
Sbjct: 111 GAVLDRSSQRIVFMVSTEGGVNIEEVAEKTPHLLHKMPIDPLVGAMPYQGRELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SLLEINPL+I+ N +L  LD+KI  D NALYR  ++ 
Sbjct: 171 GKQIQQFAQIFCQLGKMFVEKDLSLLEINPLVILDNDQLHCLDAKIVVDGNALYRQPELN 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD S+ED+RE  A+Q +L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMRDPSQEDAREAAAEQWHLNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD SVK IL+NIFGGI+RCD++ +GI++AV EV +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDQSVKAILVNIFGGIVRCDLIAEGIVAAVNEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A+SGLN+I A  L DAA ++V+A +G
Sbjct: 351 GNNAPLGREILAQSGLNIIAATSLTDAAVQVVNAAEG 387


>gi|108761542|ref|YP_631734.1| succinyl-CoA synthase subunit beta [Myxococcus xanthus DK 1622]
 gi|122981035|sp|Q1D6I9|SUCC_MYXXD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|108465422|gb|ABF90607.1| succinyl-CoA synthase, beta subunit [Myxococcus xanthus DK 1622]
          Length = 386

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 192/384 (50%), Positives = 263/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K + RKY VP  KG++  S + AE+A K L   + VVK+QIHA         
Sbjct: 1   MKIHEYQGKEIFRKYGVPTPKGILAVSANDAEAAAKELGTSVVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S        +++LG  L T QTGP G  V+ VY+E+G  I +ELYL
Sbjct: 52  -GGRGKGGGVKLAKSPAEAKELAKQMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +  + F+AS +GG++IEEVA+ +P+KI +  +DP +G        L   L L 
Sbjct: 111 GVTLDRATSRITFMASREGGVEIEEVAEKHPEKILRESVDPAVGFQDFQGRKLAFGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY+ F D D SL+EINPL+I+K+G +  LD+K++FD+NALYRH D+ 
Sbjct: 171 GPTVNKFTQFCSALYRMFMDTDASLVEINPLVILKDGGVVALDAKVTFDENALYRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD++EE+ REI+AK+ +L+YIALDGNIGCMVNGAGLAMATMD IKL GG+PANFLDVG
Sbjct: 231 EYRDLAEEEPREIQAKEWDLAYIALDGNIGCMVNGAGLAMATMDTIKLVGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++KV AAFK+I +D +VK +L+NIFGGIM+CDV+ +GI++A KEV++ +PLV+RLE
Sbjct: 291 GGANKEKVTAAFKLILADPAVKAVLVNIFGGIMKCDVIAEGIIAAAKEVQLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV+ G  L++ SGL +  A +L
Sbjct: 351 GTNVEKGKELLSNSGLAITPADNL 374


>gi|327261083|ref|XP_003215361.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 463

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 164/398 (41%), Positives = 246/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V ++   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMELLKEAGISVPHGLVANTPEDAYNVAKQIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +        ++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAREISSRMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S QGG++IE+VA + P  I K  +D + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSAQGGVNIEDVAAENPDAIAKEPVDIVEGIQKEQAIRLAKKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    +Y  F   D +++EINP++    G +  +D+KI+FD N+ YR   I 
Sbjct: 230 ANLVNEAAENMIKIYNLFIKFDATMVEINPMVEDSTGIVMCMDAKINFDSNSAYRQQKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D ++ED R+ +A + +L+YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 SLQDWTQEDDRDRDAAKSDLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AF++ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK++++ IP+V+RL+
Sbjct: 350 GGATAQRVTEAFRLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVKDLELKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI +SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALITDSGLKILACDDLDEAAKMVVKLSEIV 447


>gi|89073522|ref|ZP_01160045.1| succinyl-CoA synthetase subunit beta [Photobacterium sp. SKA34]
 gi|89050786|gb|EAR56267.1| succinyl-CoA synthetase subunit beta [Photobacterium sp. SKA34]
          Length = 388

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 181/385 (47%), Positives = 246/385 (63%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTPQEAAEAAGKIGGSKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   +    +  LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHETKDGIKQFAQNWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F + D++LLEINPL+I  +  L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFTKIFMGLANMFAEYDLALLEINPLVITGDNNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G   +A+SGLN+I A  L 
Sbjct: 351 GNNAEVGAAKLADSGLNIIAATSLT 375


>gi|34580486|ref|ZP_00141966.1| succinyl-CoA synthetase beta chain [Rickettsia sibirica 246]
 gi|28261871|gb|EAA25375.1| succinyl-CoA synthetase beta chain [Rickettsia sibirica 246]
          Length = 386

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  + FIAST+GG+DIE VA+  P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRLASCITFIASTEGGVDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L+RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLAIIPAHDLADAANKIVEAIR 386


>gi|323527261|ref|YP_004229414.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. CCGE1001]
 gi|323384263|gb|ADX56354.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1001]
          Length = 389

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|307730898|ref|YP_003908122.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. CCGE1003]
 gi|307585433|gb|ADN58831.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. CCGE1003]
          Length = 389

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAVLQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|157964516|ref|YP_001499340.1| succinyl-CoA synthetase subunit beta [Rickettsia massiliae MTU5]
 gi|189081786|sp|A8F1K7|SUCC_RICM5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157844292|gb|ABV84793.1| Succinyl-CoA synthetase beta chain [Rickettsia massiliae MTU5]
          Length = 386

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINDTIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEE+A+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEIAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDAKITFDDNGLFQHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD++++  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERIKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|170693427|ref|ZP_02884586.1| succinyl-CoA synthetase, beta subunit [Burkholderia graminis C4D1M]
 gi|170141582|gb|EDT09751.1| succinyl-CoA synthetase, beta subunit [Burkholderia graminis C4D1M]
          Length = 389

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|50120302|ref|YP_049469.1| succinyl-CoA synthetase subunit beta [Pectobacterium atrosepticum
           SCRI1043]
 gi|81645720|sp|Q6D7G2|SUCC_ERWCT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49610828|emb|CAG74273.1| succinyl-CoA synthetase beta chain [Pectobacterium atrosepticum
           SCRI1043]
          Length = 388

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/385 (48%), Positives = 253/385 (65%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S+ + + +     LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+EDSRE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMRDPSQEDSREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  VK + +NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G + +A+SGLN+I A  L 
Sbjct: 351 GNNAELGAKKLADSGLNIIAATSLT 375


>gi|325294007|ref|YP_004279871.1| succinyl-CoA synthetase subunit beta [Agrobacterium sp. H13-3]
 gi|325061860|gb|ADY65551.1| succinyl-CoA synthetase subunit beta [Agrobacterium sp. H13-3]
          Length = 397

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 259/397 (65%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  +++ V+S  +++LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAKTIEEVVSHSKDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GV+  DVA++   LEL+
Sbjct: 121 SLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIHTIAIDPEKGVSDADVAAISKALELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+M+NG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GVAAEDAKALFPILYKAFNEKDMALLEVNPLIVMENGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +L+ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKLLNESGLAITAADDLDDAAKKIVAAING 397


>gi|295671817|ref|XP_002796455.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb01]
 gi|226283435|gb|EEH39001.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb01]
          Length = 444

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V + KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGIPKGEVARTAEEAEAVAKQIGVDDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAAQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGG+DIE VAKD P  I    ID  +GVT +  A++   L   
Sbjct: 151 AILMDRKSQAPVIVSSSQGGVDIEGVAKDSPDAITTTHIDINVGVTDQMAANIARDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKDTIQKLYKVFMEKDATQIEINPLCETTDHQVLAMDAKFGFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDPDELKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMEQAHKLINDSGLKIFSIEDLQNAAEKSVQFSKVV 428


>gi|209518325|ref|ZP_03267150.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. H160]
 gi|209501244|gb|EEA01275.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. H160]
          Length = 389

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKVAVDPSTGLKDSEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|167835576|ref|ZP_02462459.1| succinyl-CoA synthetase subunit beta [Burkholderia thailandensis
           MSMB43]
          Length = 388

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYADQILGMQLKTHQTGPEGQKVNRLLIEEGADIRKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSLGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|99034389|ref|ZP_01314405.1| hypothetical protein Wendoof_01000792 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225677209|ref|ZP_03788202.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590733|gb|EEH11967.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 383

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 211/396 (53%), Positives = 273/396 (68%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NVPV KG V +S    ++ +  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEVLHKFNVPVPKGFVATSAEEVKTQVSQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++     +++++G TL+T QTGP+G +V  VYVE+G+ I +E YL
Sbjct: 58  -------GGVKLAKSVEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++D       FI S++GGMDIEEVAK+ P KI K  IDP    TS D + L     L 
Sbjct: 111 SLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDIDPA---TSFDSSKLSSSFHLS 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   +Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 168 PEQIEKISNIAKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNALYRHPEIM 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ LSYI +DG+IGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 228 ELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 288 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +LD+AAQKIV  VK
Sbjct: 348 GTNFEEGKKILEESGLNIIAADELDEAAQKIVKEVK 383


>gi|60099069|emb|CAH65365.1| hypothetical protein RCJMB04_22i13 [Gallus gallus]
          Length = 463

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 168/398 (42%), Positives = 245/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V  S   A    K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMGLLQEAGISVPHGLVAKSPEEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAKDISSKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQAVRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DMQDWTQEDERDRDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ + IP+V+RL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDLKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI  SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIV 447


>gi|15892522|ref|NP_360236.1| succinyl-CoA synthetase subunit beta [Rickettsia conorii str.
           Malish 7]
 gi|21264041|sp|Q92I21|SUCC_RICCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|15619682|gb|AAL03137.1| succinyl-CoA synthetase beta chain [Rickettsia conorii str. Malish
           7]
          Length = 386

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGIDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L+RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDATQIEINPLIVNSDGNLLALDAKITFDDNGLFRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLAIIPAHDLADAANKIVEAIR 386


>gi|225681391|gb|EEH19675.1| succinyl-CoA ligase beta-chain [Paracoccidioides brasiliensis Pb03]
 gi|226288516|gb|EEH44028.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb18]
          Length = 444

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V + KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGIPKGEVARTAEEAEAVAKQIGVDDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAAQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGG+DIE VAK+ P  I    ID  +GVT +  A++   L   
Sbjct: 151 AILMDRKSQAPVIVSSSQGGVDIEGVAKESPDAITTTHIDINVGVTDQIAANIARDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKDTIQKLYKVFMEKDATQIEINPLCETTDHQVLAMDAKFGFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDPDELKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMEQAHKLINDSGLKIFSIEDLQNAAEKSVQFSKVV 428


>gi|70982219|ref|XP_746638.1| succinyl-CoA synthetase beta subunit [Aspergillus fumigatus Af293]
 gi|66844261|gb|EAL84600.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus Af293]
 gi|159122127|gb|EDP47249.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus A1163]
          Length = 444

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 252/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K++     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSARLLKSYGVGVPKGEVAHSAEEAEAVAKSIGNDDMVIKAQVLAGGRGKGSFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFASQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK++P+ I    ID  +GVT +    +   L   
Sbjct: 151 AVLMDRATQTPVIVASSQGGMDIEAVAKEHPEAIMTTPIDIKVGVTDDIARKIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKTTIQNLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLNFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ + IP+V RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIARGLINVVEDMGLRIPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI ESGL + +  DL  AA+K V   K V
Sbjct: 391 GTNMEQAQKLINESGLKIFSIEDLQSAAEKSVQFSKVV 428


>gi|326914161|ref|XP_003203396.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Meleagris gallopavo]
          Length = 463

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 167/398 (41%), Positives = 245/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V  +   A    K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMGLLQEAGISVPHGLVARTPDEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAKDISSKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQALRLAQKMGFP 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 230 PNLVDEAAENMIKLYYLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 290 DMQDWTQEDERDRDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ + IP+V+RL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDLKIPIVVRLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI  SGL ++   DLD+AA+ +V   + V
Sbjct: 410 GTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIV 447


>gi|332284600|ref|YP_004416511.1| Succinyl-CoA synthetase beta chain [Pusillimonas sp. T7-7]
 gi|330428553|gb|AEC19887.1| Succinyl-CoA synthetase beta chain [Pusillimonas sp. T7-7]
          Length = 386

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 195/384 (50%), Positives = 261/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K LL+K+ V V +G+   SV  A +A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKELLKKFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG  L+T QTGP G +V  +Y+E+GADI +E YL
Sbjct: 52  -GGRGKGGGVKLGRSLDEVRQLSSEILGMQLVTHQTGPEGQKVGRLYIEEGADIQQEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR +  VAFIAS++GGMDIEEVA   P+KI  ++IDPL G T  D  +L   + + 
Sbjct: 111 SAVTDRATQKVAFIASSEGGMDIEEVAHSSPEKIITVMIDPLKGFTQADGETLAKGVGMP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   LY  + + D SL+EINPL     G +  LD+K +FD NAL+RH +I 
Sbjct: 171 ADSVAQFIDVCQKLYACYMETDASLVEINPLNRDSKGNIIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD++EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 EYRDLAEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+ S+  VK IL+NIFGGIMRCDV+ +G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLSNEGVKAILVNIFGGIMRCDVIAEGVIAACKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G +L+AESGL +I+A  +
Sbjct: 351 GTNEELGKKLLAESGLPIISADTM 374


>gi|153873562|ref|ZP_02002104.1| succinyl-CoA synthetase beta subunit [Beggiatoa sp. PS]
 gi|152069971|gb|EDN67895.1| succinyl-CoA synthetase beta subunit [Beggiatoa sp. PS]
          Length = 387

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +   Y +PV  G V    + A+   K L G  +++K+Q+HAGGRGK    
Sbjct: 1   MNIHEYQAKQIFANYGIPVPTGYVAFKSNEAQQNAKRLGGDAWMIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   SL+ V      +LG+ L T QTG TG  ++CV VE+   I  ELYL
Sbjct: 58  -------GGVKKAQSLEQVKEITEGLLGTQLKTHQTGATGQPIHCVLVENTTAINSELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  IAS  GGMDIEEVA + P+KI ++ IDPL+G+ +     +   L L+
Sbjct: 111 SLVVDRASARIKVIASRAGGMDIEEVAANSPEKIIQITIDPLVGIGTYQCGEIAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             AR     +  NLY+ F DKD+SL+EINPLII   G L  LD+KI+ DDNALYRH D+ 
Sbjct: 171 ALARKQLTAILFNLYRLFIDKDLSLVEINPLIINDQGELMALDAKINIDDNALYRHTDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D S+ED +E +A+Q +L+Y+ALDG+I CMVNGAGLAMATMD+I++ GG PANFLDVG
Sbjct: 231 KLYDASQEDEKEHKARQFDLNYVALDGDIACMVNGAGLAMATMDVIQIQGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   +KV  A KII SDS VK IL+NIFGGI+RCD++ +G++ A+ E    +P+V+RLE
Sbjct: 291 GGTTAEKVTEAVKIILSDSKVKAILVNIFGGIVRCDLIAEGVIHAISETGTQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G  L+ +SG ++ +A +LD+AA+K+V A KG
Sbjct: 351 GTNVEKGKALLKDSGFSITSADNLDEAAKKVVSAAKG 387


>gi|327289467|ref|XP_003229446.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 450

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 161/396 (40%), Positives = 241/396 (60%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V  GVV  +   A  A + +     VVK+Q+ AGGRGKG F+
Sbjct: 36  LSLHEYLSMRLLKEAGVSVPNGVVARTPGEAFKAAQNIGSNELVVKAQVLAGGRGKGTFE 95

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V + +     +E Y 
Sbjct: 96  ---GGLKGGVKIVYSPEEAKEMASQMIGKKLFTKQTGERGRICNEVLICERRYPKKEYYF 152

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S QGG++IE+VA + P+ I K  +D + G+ +E    L   +   
Sbjct: 153 AIALERAFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPVDIVEGIQTEQALRLAQKMGFP 212

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D       LY+ F   D  ++EINP++    G++  +D+KI+ D N+ +R   + 
Sbjct: 213 ADVAEDAAHNMVKLYQFFIKYDALMVEINPMVEDSTGKVICIDAKINLDSNSAFRQKSVF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D S+ED R+ EA    L+Y+ LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 DLQDWSQEDERDREAANAQLNYVPLDGDIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AFK+ITSD+ V+ +L+NIFGGIMRCD++ +GI+ A  E+ + +P+V+RL+
Sbjct: 333 GGASPEQVKEAFKLITSDTRVQSVLVNIFGGIMRCDIIAQGIIMAASELDLKVPIVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  ++    LIA+SGL ++   DLD AAQ  V   +
Sbjct: 393 GTQMESAKALIAKSGLKILPCDDLDQAAQMAVKLSQ 428


>gi|163783578|ref|ZP_02178568.1| succinyl-CoA ligase beta subunit [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881198|gb|EDP74712.1| succinyl-CoA ligase beta subunit [Hydrogenivirga sp. 128-5-R1-1]
          Length = 383

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 178/397 (44%), Positives = 251/397 (63%), Gaps = 14/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  +Y +PV +G V  ++  A    + L     VVK+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKEIFARYGLPVPEGKVAFTLKEARQVAEELGSFPLVVKAQVHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   +  +   +  +LG  L T Q  P G  VN V++E    I +E YL
Sbjct: 58  -------GGVKIVKDMDELEQAVEGMLGKVLKTFQC-PDGKPVNRVWIEKATAIDKEYYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       +AS+ GGM+IEEVAK+ P+ I    +DP +G+       L   L L 
Sbjct: 110 SITLDRARSKPIVMASSAGGMEIEEVAKENPEAIIIEEVDPALGLMPHQARKLAFKLGLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY+ + D D SL+EINPL++ K+G L  LD+K+  DDNAL+RH DI+
Sbjct: 170 ---VKDFSKMLLTLYRVYIDLDASLVEINPLVLDKDGNLIALDAKLDVDDNALFRHKDIE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+    E+EA ++ L+YI L GNIGCMVNGAGLAMATMDI+KL GG PANFLDVG
Sbjct: 227 EMEDESQISPLEVEANKYGLNYIKLSGNIGCMVNGAGLAMATMDIVKLAGGEPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A AF+I+ +D  VK + INIFGGI+RCD L +G++ A K V++++P+V+R+E
Sbjct: 287 GGANVEQIANAFRILMADEDVKAVFINIFGGILRCDRLAQGLVEAGKVVELSVPIVVRME 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD G +++AESG+N I A D+ D A+K V    G
Sbjct: 347 GTNVDEGKKILAESGMNFINAEDMWDGAKKAVELAGG 383


>gi|90580056|ref|ZP_01235864.1| succinyl-CoA synthetase subunit beta [Vibrio angustum S14]
 gi|90438941|gb|EAS64124.1| succinyl-CoA synthetase subunit beta [Vibrio angustum S14]
          Length = 388

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 181/385 (47%), Positives = 246/385 (63%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTPQQAAEAAGKIGGSKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   +    +  LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHETKDGIKQFAQNWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F + D++LLEINPL+I  +  L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFTKIFMGLANMFAEYDLALLEINPLVITGDNNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G   +A+SGLN+I A  L 
Sbjct: 351 GNNAEVGAAKLADSGLNIIAATSLT 375


>gi|167561701|ref|ZP_02354617.1| succinyl-CoA synthetase subunit beta [Burkholderia oklahomensis
           EO147]
 gi|167568937|ref|ZP_02361811.1| succinyl-CoA synthetase subunit beta [Burkholderia oklahomensis
           C6786]
          Length = 388

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSLGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|240949389|ref|ZP_04753730.1| succinyl-CoA synthetase beta chain [Actinobacillus minor NM305]
 gi|240296138|gb|EER46794.1| succinyl-CoA synthetase beta chain [Actinobacillus minor NM305]
          Length = 389

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 186/396 (46%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y++PV++G+   S     +A+K L G ++  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAQYHLPVSQGIACQSADETVNALKRLNGEVWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +     LG+ L+T QT   G  VN +Y+E+   I RELYL
Sbjct: 58  -------GGVKLVHNEQEARAFADYWLGNRLVTFQTDSRGQPVNTIYIEETCQIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA+  P+ I K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRSSQKVIFMASSAGGMNIEEVAEKTPELIHKVALDPLVGGQPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F +KD++LLE+NPL++ + G+L  LD+K+  D NALYRH ++Q
Sbjct: 171 NDEVKQFSHIFVQLSKLFIEKDLALLEVNPLVVTQQGQLICLDAKMVIDSNALYRHPELQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA +  L+Y+AL+GNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 ALQDPSQEDPREAEAAKWQLNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFK+I SD +VK +L+NIFGGI+RCD++ +GI++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKLILSDHNVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVQVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  ++A+SGL+++ A  L +AA   V A +
Sbjct: 351 GTNAELGREILAKSGLSLLVANTLKEAAVLAVKAAQ 386


>gi|225075113|ref|ZP_03718312.1| hypothetical protein NEIFLAOT_00112 [Neisseria flavescens
           NRL30031/H210]
 gi|224953597|gb|EEG34806.1| hypothetical protein NEIFLAOT_00112 [Neisseria flavescens
           NRL30031/H210]
          Length = 406

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 19  MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 76  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 128

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 129 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 188

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 189 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 248

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 249 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 308

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 309 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 368

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 369 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 404


>gi|302507602|ref|XP_003015762.1| hypothetical protein ARB_06073 [Arthroderma benhamiae CBS 112371]
 gi|302667905|ref|XP_003025531.1| hypothetical protein TRV_00293 [Trichophyton verrucosum HKI 0517]
 gi|291179330|gb|EFE35117.1| hypothetical protein ARB_06073 [Arthroderma benhamiae CBS 112371]
 gi|291189645|gb|EFE44920.1| hypothetical protein TRV_00293 [Trichophyton verrucosum HKI 0517]
          Length = 444

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGEEAEAIAKNIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    ID   GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDAITTTPIDIHTGVTDEIARNIATGLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 EQCVPEAVETIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  + LI+ESGL + +  DL  AA+K V   K V
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSKVV 428


>gi|302381585|ref|YP_003817408.1| succinyl-CoA synthetase subunit beta [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302192213|gb|ADK99784.1| succinyl-CoA synthetase, beta subunit [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 396

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 251/395 (63%), Positives = 317/395 (80%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ +  PVA GV ++SV   E+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGFGAPVAAGVAVTSVDQVEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++  ++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAFSVEEAVAHAKEMLGNTLVTAQTGDAGKQVNRLYIEDGADIERELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR  G +A++ ST+GGMDIE VA D P KI  ++IDP  GVT  DVA++     L 
Sbjct: 121 SLLVDRAHGRIAYVVSTEGGMDIEAVAHDTPDKIQTIVIDPETGVTEADVAAINAAYGLT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF + DM +LE+NPLI+MK+G LRVLD+K+SFD NAL+RH DI+
Sbjct: 181 GAAAEDGKSLFPILYKAFVETDMDMLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHEDIK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 TLRDETEEDAKEIEASKWDLAYVSLDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D +V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKDKVAAAFKIITADPNVQGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G +++ ESGL +  A DLDDAAQKIV AV
Sbjct: 361 GTNAELGKKILNESGLAITAADDLDDAAQKIVAAV 395


>gi|220933987|ref|YP_002512886.1| succinyl-CoA synthetase, beta subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|254778453|sp|B8GN38|SUCC_THISH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219995297|gb|ACL71899.1| succinyl-CoA synthetase, beta subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 386

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 208/396 (52%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAKAL R++ +PV +GV +S   A   AI +L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKALFREHGIPVPEGVAVSDPAALGEAISSLGGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+    + +   + E+LG  L T QTGP G  +N V VE   DI RELYL
Sbjct: 58  -------GGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    VA +AS  GGMDIE VA + P+KI  L +DP  G        +   L L+
Sbjct: 111 SLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F D D SL+EINPL++ K G L  LD+KI+ DDN LYRH  + 
Sbjct: 171 GPQVSALVKLLGQLYRLFVDSDASLVEINPLVVTKTGELIALDAKINLDDNGLYRHQALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ED+RE  A++H L+Y+ LDGNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 ELRDETQEDAREARAREHELNYVRLDGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG    +VA AFK+I SD +VK + +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGTTAARVAEAFKLILSDEAVKAVFVNIFGGIVRCDLIAEGIINAVKEVHVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +++AESGLN+ITA  L D A+++V +V+
Sbjct: 351 GTNVDQGKQMLAESGLNIITAESLTDGARRVVASVQ 386


>gi|329891084|ref|ZP_08269427.1| succinyl-CoA ligase ADP-forming subunit beta [Brevundimonas
           diminuta ATCC 11568]
 gi|328846385|gb|EGF95949.1| succinyl-CoA ligase ADP-forming subunit beta [Brevundimonas
           diminuta ATCC 11568]
          Length = 396

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 261/395 (66%), Positives = 322/395 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+ Y  PVA GV I+S   AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLKGYGAPVAAGVAITSADQAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELPAD+KGGVR+  S++  ++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELPADAKGGVRLAFSIEEAVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G  AF+ ST+GGMDIEEVA   P+KI  + I+P  GVT+E+VA++   LEL 
Sbjct: 121 SLLVDRSVGQTAFVVSTEGGMDIEEVAHATPEKIHTIAINPEAGVTAENVAAINAALELT 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  LFP LYKAF +KDM +LEINPLI+M+NG LRVLD+K+SFD NALYRH DI+
Sbjct: 181 GDAAEDGKSLFPILYKAFVEKDMDMLEINPLIVMENGHLRVLDAKVSFDGNALYRHEDIR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +DKVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKDKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G +++ ESGL +  A DLDDAAQKIV AV
Sbjct: 361 GTNAELGKKILNESGLTIQAADDLDDAAQKIVAAV 395


>gi|284097280|ref|ZP_06385420.1| Succinyl-CoA synthetase beta chain [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283831204|gb|EFC35174.1| Succinyl-CoA synthetase beta chain [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 395

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/397 (51%), Positives = 270/397 (68%), Gaps = 13/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK L  ++ VPV +G  I +  AAE     L  P+YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEFQAKQLFAQFGVPVPRGKEIKTPRAAEKWAAALDTPVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    + V +  RE++G TL+T QTGP G +V  + +E+GA I +ELYL
Sbjct: 58  -------GGVKITKQREEVPALTRELIGKTLVTHQTGPKGRKVRRLLIEEGAGIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR SG   F+AST+GGM+IEEVA+  P+K+F+  +DP +G    +  +L   L L 
Sbjct: 111 SLLVDRDSGCPTFLASTEGGMEIEEVAEKTPEKLFRETVDPAVGYHPYNGRNLAFALGLP 170

Query: 181 ---GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                       +  NLY+ F +K+ SL+EINPL+I  + +L  LD K++FDDNALY+H 
Sbjct: 171 SLEKAVVTPFIQMLGNLYRLFMEKNASLVEINPLVITTDKQLVALDGKVTFDDNALYKHQ 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+Q  RD+ EE+  EIEA  +NL+Y+ LDG+IGCMVNGAGLAMATMD+IKL G  PANFL
Sbjct: 231 DVQAFRDLHEEEPLEIEAGANNLNYVKLDGDIGCMVNGAGLAMATMDVIKLAGAEPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA ++ VAA F+I+  D  VKGI INIFGGI+RC+ +  G++ A KEV I +P+V+
Sbjct: 291 DVGGGATKETVAAGFRILLKDRKVKGIFINIFGGIVRCERIANGVIEASKEVGITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           RL+G N + G +++ ESGL V  A DL +AAQKIV  
Sbjct: 351 RLQGTNAEEGRKILLESGLKVDVATDLWEAAQKIVAM 387


>gi|241760332|ref|ZP_04758427.1| succinyl-CoA synthetase beta chain [Neisseria flavescens SK114]
 gi|241319210|gb|EER55688.1| succinyl-CoA synthetase beta chain [Neisseria flavescens SK114]
          Length = 388

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGDLACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|53718418|ref|YP_107404.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           K96243]
 gi|53724721|ref|YP_102101.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei ATCC
           23344]
 gi|67639769|ref|ZP_00438604.1| succinyl-CoA synthetase beta chain [Burkholderia mallei GB8 horse
           4]
 gi|76811595|ref|YP_332388.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           1710b]
 gi|121600535|ref|YP_993971.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei SAVP1]
 gi|124384843|ref|YP_001028362.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei NCTC
           10229]
 gi|126440736|ref|YP_001057864.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           668]
 gi|126448502|ref|YP_001079596.1| succinyl-CoA synthetase subunit beta [Burkholderia mallei NCTC
           10247]
 gi|126451915|ref|YP_001065098.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           1106a]
 gi|134279463|ref|ZP_01766175.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           305]
 gi|166998883|ref|ZP_02264735.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei PRL-20]
 gi|167718279|ref|ZP_02401515.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           DM98]
 gi|167737327|ref|ZP_02410101.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei 14]
 gi|167814451|ref|ZP_02446131.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei 91]
 gi|167822916|ref|ZP_02454387.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei 9]
 gi|167844483|ref|ZP_02469991.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           B7210]
 gi|167893009|ref|ZP_02480411.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           7894]
 gi|167901473|ref|ZP_02488678.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909717|ref|ZP_02496808.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           112]
 gi|167917740|ref|ZP_02504831.1| succinyl-CoA synthetase subunit beta [Burkholderia pseudomallei
           BCC215]
 gi|217419521|ref|ZP_03451027.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           576]
 gi|226199413|ref|ZP_03794971.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811012|ref|YP_002895463.1| succinyl-CoA synthetase beta chain [Burkholderia pseudomallei
           MSHR346]
 gi|242314827|ref|ZP_04813843.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1106b]
 gi|254176800|ref|ZP_04883457.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei ATCC
           10399]
 gi|254187590|ref|ZP_04894102.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196178|ref|ZP_04902602.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           S13]
 gi|254203784|ref|ZP_04910144.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei FMH]
 gi|254208761|ref|ZP_04915109.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei JHU]
 gi|254259837|ref|ZP_04950891.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1710a]
 gi|254296289|ref|ZP_04963746.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           406e]
 gi|254360188|ref|ZP_04976458.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei
           2002721280]
 gi|81380303|sp|Q63WW2|SUCC_BURPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81605604|sp|Q62MG7|SUCC_BURMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123600135|sp|Q3JVL5|SUCC_BURP1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046894|sp|A3MH60|SUCC_BURM7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046895|sp|A2S8U3|SUCC_BURM9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046896|sp|A1V6W8|SUCC_BURMS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046897|sp|A3NRX7|SUCC_BURP0 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046898|sp|A3N693|SUCC_BURP6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52208832|emb|CAH34771.1| succinyl-CoA synthetase beta chain [Burkholderia pseudomallei
           K96243]
 gi|52428144|gb|AAU48737.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei ATCC
           23344]
 gi|76581048|gb|ABA50523.1| succinyl-CoA synthase, beta subunit [Burkholderia pseudomallei
           1710b]
 gi|121229345|gb|ABM51863.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei SAVP1]
 gi|124292863|gb|ABN02132.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei NCTC
           10229]
 gi|126220229|gb|ABN83735.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           668]
 gi|126225557|gb|ABN89097.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1106a]
 gi|126241372|gb|ABO04465.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei NCTC
           10247]
 gi|134248663|gb|EBA48745.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           305]
 gi|147745296|gb|EDK52376.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei FMH]
 gi|147750637|gb|EDK57706.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei JHU]
 gi|148029428|gb|EDK87333.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei
           2002721280]
 gi|157806086|gb|EDO83256.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           406e]
 gi|157935270|gb|EDO90940.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160697841|gb|EDP87811.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei ATCC
           10399]
 gi|169652921|gb|EDS85614.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           S13]
 gi|217396825|gb|EEC36841.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           576]
 gi|225928489|gb|EEH24518.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504685|gb|ACQ97003.1| succinyl-CoA synthetase beta chain [Burkholderia pseudomallei
           MSHR346]
 gi|238520367|gb|EEP83828.1| succinyl-CoA synthetase beta chain [Burkholderia mallei GB8 horse
           4]
 gi|242138066|gb|EES24468.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1106b]
 gi|243064963|gb|EES47149.1| succinyl-CoA synthase, beta subunit [Burkholderia mallei PRL-20]
 gi|254218526|gb|EET07910.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1710a]
          Length = 388

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAQELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSVGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|86147659|ref|ZP_01065968.1| succinyl-CoA synthetase subunit beta [Vibrio sp. MED222]
 gi|218710209|ref|YP_002417830.1| succinyl-CoA synthetase subunit beta [Vibrio splendidus LGP32]
 gi|254778455|sp|B7VI35|SUCC_VIBSL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|85834570|gb|EAQ52719.1| succinyl-CoA synthetase subunit beta [Vibrio sp. MED222]
 gi|218323228|emb|CAV19405.1| Succinyl-CoA synthetase beta chain [Vibrio splendidus LGP32]
          Length = 388

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 185/396 (46%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGQMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A+ L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAVSLTDAAQKVVAAAE 386


>gi|304394262|ref|ZP_07376185.1| succinyl-CoA ligase [ADP-forming] subunit beta [Ahrensia sp.
           R2A130]
 gi|303293702|gb|EFL88079.1| succinyl-CoA ligase [ADP-forming] subunit beta [Ahrensia sp.
           R2A130]
          Length = 397

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 250/397 (62%), Positives = 315/397 (79%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L  +  P+A+GV I +    ++AI+ LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKQVLAGFGAPIAQGVPIMTAADVDAAIEALPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ELP D+KGGVR+  S   V S + E+LG+TL+TKQTGP G +VN +Y+EDGADI RELY 
Sbjct: 61  ELPEDAKGGVRLAFSPDEVRSHVAEMLGNTLVTKQTGPEGKQVNRLYLEDGADIDRELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LV+R +G V+F+AST+GGMDIE VA++ P+KI  + ID   GVT  +VASL    +L 
Sbjct: 121 SILVNRETGKVSFVASTEGGMDIETVAEETPEKIHTIDIDHSAGVTDANVASLVSAFDLS 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +   LF  LYKAF D DM++LE+NPLI+M+NG LRVLD+K+SFD NA +R  DIQ
Sbjct: 181 GTAADEAPTLFRQLYKAFTDTDMAMLEVNPLIVMENGSLRVLDAKVSFDGNAEFRQADIQ 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED +EIEA +++L+Y+ALDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 241 ELRDLTEEDDKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAFKIIT+D  VKGIL+NIFGGIMRCD + +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGATTEKVTAAFKIITADPKVKGILVNIFGGIMRCDTIAEGVVTAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G  V+ G  ++  S ++V+ A DLDDAAQKIV AVKG
Sbjct: 361 GTKVEEGKAILNGSDVDVVAADDLDDAAQKIVKAVKG 397


>gi|301167411|emb|CBW26993.1| succinyl-CoA synthetase beta chain (SCS-beta) [Bacteriovorax
           marinus SJ]
          Length = 390

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 194/398 (48%), Positives = 274/398 (68%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L++K+ + V  G V  SV  A    K L G ++VVK+QIHAGGRGK    
Sbjct: 1   MNVHEYQAKELMKKFGIKVLGGQVAKSVDEAVEGAKKLGGNVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   +ILG TL+T QTGP G +V  + VE+G +I  E Y 
Sbjct: 58  -------GGVKLAKNLDEVKAHADDILGKTLVTHQTGPEGKKVLTLLVEEGCEIEHEYYA 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +G + F+AS++GG++IE+VA++ P+KI K+ +DP  G T      L   + ++
Sbjct: 111 GIVLDRATGKITFMASSEGGVEIEKVAEETPEKIIKVAVDPAAGFTPFIGRKLAYGIGIK 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                 +    F  LY  + D D ++ EINPL+  K G +  LD+K++FDDNAL+RH +I
Sbjct: 171 DKDLVKEATKFFKGLYDLYVDTDCTIAEINPLVKTKQGEIIALDAKLNFDDNALFRHPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +E+RD +EE + E++A ++ LSYI+LDGNIGC+VNGAGLAM TMDIIKL+GG PANFLDV
Sbjct: 231 EEMRDPTEESAEELDAAKYGLSYISLDGNIGCLVNGAGLAMGTMDIIKLHGGEPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++ V  AF II SDS+VK IL+NIFGGIM+CD++ +G+++A K + + +PLV+RL
Sbjct: 291 GGGATKETVEKAFSIILSDSNVKAILVNIFGGIMKCDIIAEGVVAAAKSLGVTVPLVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV +G +++ ES L +I A DL DAA K+V A KG
Sbjct: 351 EGTNVALGKKILNESDLTIIAADDLADAAAKVVEATKG 388


>gi|229586711|ref|YP_002845212.1| succinyl-CoA synthetase subunit beta [Rickettsia africae ESF-5]
 gi|259511790|sp|C3PNF9|SUCC_RICAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|228021761|gb|ACP53469.1| Succinyl-CoA synthetase beta chain [Rickettsia africae ESF-5]
          Length = 386

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKTPDKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L+RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLAIIPAHDLADAANKIVEAIR 386


>gi|284799553|ref|ZP_05984280.2| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria subflava
           NJ9703]
 gi|284797374|gb|EFC52721.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria subflava
           NJ9703]
          Length = 406

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 19  MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 76  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 128

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 129 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 188

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 189 KDKQINEFVKLMTGAYKAFIENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 248

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 249 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 308

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 309 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 368

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 369 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 404


>gi|90416062|ref|ZP_01223995.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2207]
 gi|90332436|gb|EAS47633.1| succinyl-CoA synthetase subunit beta [marine gamma proteobacterium
           HTCC2207]
          Length = 388

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +V  A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIAAETVAEAVAAADEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVSSKAEIEAFSEQWLGKNLVTYQTDAKGQPVSRILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+KI K +IDPL G        L   L L+
Sbjct: 111 GAVVDRGSRRIIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQGRDLAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD+ LLE+NPL+I   G L  LD+K+  D NA+YR   I+
Sbjct: 171 GVQIKQFVQIFMGLAKLFKEKDLELLEVNPLVITDEGNLHCLDAKVIIDGNAMYRQPAIK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED+RE  A    L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG+PANFLDVG
Sbjct: 231 AMHDPSQEDAREAHAASFELNYVALDGNIGCMVNGAGLAMGTMDIVHLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +LINIFGGI+RCD++  G++ AV+EV + IP+V+RLE
Sbjct: 291 GGATKERVVEAFKIILSDSNVKAVLINIFGGIVRCDLIADGVIGAVEEVGVKIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G + +AESGL +I A  L DAAQ+ V A  G
Sbjct: 351 GNNAELGTKKLAESGLAIIAATSLTDAAQQAVKAAGG 387


>gi|238650298|ref|YP_002916150.1| succinyl-CoA synthetase subunit beta [Rickettsia peacockii str.
           Rustic]
 gi|259511791|sp|C4K0K1|SUCC_RICPU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|238624396|gb|ACR47102.1| succinyl-CoA synthetase subunit beta [Rickettsia peacockii str.
           Rustic]
          Length = 386

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 199/396 (50%), Positives = 266/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTQTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGHLLALDAKITFDDNGLLRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|157828470|ref|YP_001494712.1| succinyl-CoA synthetase subunit beta [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165933188|ref|YP_001649977.1| succinyl-CoA synthetase subunit beta [Rickettsia rickettsii str.
           Iowa]
 gi|189081787|sp|B0BXJ5|SUCC_RICRO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081788|sp|A8GS29|SUCC_RICRS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157800951|gb|ABV76204.1| succinyl-CoA synthetase subunit beta [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165908275|gb|ABY72571.1| succinyl-CoA synthetase beta chain [Rickettsia rickettsii str.
           Iowa]
          Length = 386

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G +IL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCEILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L RH +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLLRHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD +V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKAVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAANKIVEAIR 386


>gi|56552377|ref|YP_163216.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761577|ref|ZP_04759664.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753943|ref|YP_003226836.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|81354789|sp|Q5NMF5|SUCC_ZYMMO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56543951|gb|AAV90105.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241373885|gb|EER63418.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258553306|gb|ACV76252.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 398

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 216/396 (54%), Positives = 269/396 (67%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNI+EYQA ALL +  V V  G + ++V  A  A + L  P YV+KSQI AGGRGKG F+
Sbjct: 1   MNIYEYQAMALLNERGVSVVPGYMAANVEEAVKAAEQLSSPPYVIKSQILAGGRGKGYFR 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P    GGVR+ S + +V      +LG  L+T QT   G  V  + + +   I RE YL
Sbjct: 61  ESPK-EGGGVRLVSDIAAVKKQAESMLGRHLVTAQTDDQGIPVEKLLITEAVSIAREFYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G V F+AS +GGMDIE VAK+ P+ I ++ IDP  G        +   L L 
Sbjct: 120 SLLVDRQTGRVTFVASPEGGMDIETVAKEKPEAIHRIAIDPATGFQPHHGRMIGFALGLS 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L  +LYKAF   DMSLLEINPL+   +G+L  +D+KISFDDNAL+RH DI 
Sbjct: 180 GDVFKQGIKLAASLYKAFTTSDMSLLEINPLVETNDGKLLPVDAKISFDDNALFRHPDIA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L +    D  E EA+Q  LSYI LDG+IGCMVNGAGLAM TMDII+L+G  PANFLDVG
Sbjct: 240 ALGEAGASDPLEQEARQAGLSYIKLDGSIGCMVNGAGLAMGTMDIIQLHGEMPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAF+II SD SVKGIL+NIFGGIMRCD+L +GI++A +E+ I +PLV+RLE
Sbjct: 300 GGASKEKVAAAFRIILSDPSVKGILVNIFGGIMRCDILAEGIIAAARELDITVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G   +  SGL +ITA DL DAAQKIV A++
Sbjct: 360 GNNVNEGKAALVSSGLPIITASDLGDAAQKIVAAIR 395


>gi|115388833|ref|XP_001211922.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
 gi|114196006|gb|EAU37706.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
          Length = 443

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGMPKGEVARSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNSVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID   GVT E    +   L   
Sbjct: 150 AVLMDRASQSPVIVASSQGGMDIEAVAKENPEAIITTPIDIKTGVTDEIALKIATELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCIPEAKDTIQKLYKVFMEKDATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ + IP+V RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMGLRIPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +L+ ESGL + +  DL  AA+K V   K V
Sbjct: 390 GTNMEQAQKLLNESGLKIFSIEDLQSAAEKSVQFSKVV 427


>gi|114321694|ref|YP_743377.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122310849|sp|Q0A5K0|SUCC_ALHEH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|114228088|gb|ABI57887.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 391

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 274/397 (69%), Gaps = 12/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L   Y++P+ +G V  S   A  A   L G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKHLFADYDIPIPQGYVARSSGEAVEAAGRLGGSVWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + + V      +LGS L+T QT   G  ++ V VE G DI RELYL
Sbjct: 58  -------GGVKVLKTKEEVEEFTDSLLGSRLVTHQTDAKGQPIHAVLVEQGLDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR S  V F+ S  GGMDIEEVA   P+KI  L +DP  G  +     +   L L+
Sbjct: 111 GALVDRASKRVTFMGSAAGGMDIEEVAASTPEKILTLAVDPAAGFQAYQGRKMAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY--RHLD 238
           G+       +  +LY+ F +KD+S++EINPLI+  +G+L  LD+K++ DDNA+   R   
Sbjct: 171 GKQIGQLVKIMKSLYRIFEEKDLSMIEINPLIVTGDGQLLALDAKVNVDDNAVEIGRQPQ 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I ++RD+++ED  E++A +HNL+YI LDGNIGCMVNGAGLAMATMD++ L+GG+PANFLD
Sbjct: 231 IADMRDITQEDEAEVQAAEHNLNYITLDGNIGCMVNGAGLAMATMDVVNLHGGSPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG   ++V AAFK+I S  +V+GIL+NIFGGI+RCDV+ +GI++AVKEV +++P+V+R
Sbjct: 291 VGGGTTTERVTAAFKLILSSDTVEGILVNIFGGIVRCDVIAEGIIAAVKEVGVDVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G +++A+SG+++I A DL DAA+K+V AV
Sbjct: 351 LEGTNVEQGKQMLADSGMDLIPADDLTDAAKKVVAAV 387


>gi|119486728|ref|XP_001262350.1| succinyl-CoA synthetase beta subunit, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410507|gb|EAW20453.1| succinyl-CoA synthetase beta subunit, putative [Neosartorya
           fischeri NRRL 181]
          Length = 444

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 253/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K++     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSARLLKSYGVGVPKGEVAHSAAEAEAVAKSIGNDDMVIKAQVLAGGRGKGSFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFASQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK++P+ I    +D  +GVT +    +   L   
Sbjct: 151 AVLMDRATQSPVIVASSQGGMDIEAVAKEHPEAIMTTPVDIKVGVTDDIARKIATDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 211 EQCIEDAKTTIQNLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLNFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A ++ L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+++ + IP+V RL+
Sbjct: 331 GGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIARGLINVVEDMGLRIPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   +LI ESGL + +  DL  AA+K V   K V
Sbjct: 391 GTNMEQAQKLINESGLKIFSIEDLQSAAEKSVQFSKVV 428


>gi|254181632|ref|ZP_04888229.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1655]
 gi|184212170|gb|EDU09213.1| succinyl-CoA synthetase, beta subunit [Burkholderia pseudomallei
           1655]
          Length = 388

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 261/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAQELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYSNQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  +AS++GGMDIEEVA+  P+ I K+ ++P +G+   +   L   + + 
Sbjct: 111 GIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSVGLQDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     ++   LYK+F + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQAREILKALYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|78067445|ref|YP_370214.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. 383]
 gi|123567721|sp|Q39D96|SUCC_BURS3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77968190|gb|ABB09570.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           sp. 383]
          Length = 388

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + VE+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR +  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVTQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|296314776|ref|ZP_06864717.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           polysaccharea ATCC 43768]
 gi|296838419|gb|EFH22357.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           polysaccharea ATCC 43768]
          Length = 388

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|161523833|ref|YP_001578845.1| succinyl-CoA synthetase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|189351405|ref|YP_001947033.1| succinyl-CoA synthetase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|226734931|sp|A9AFT3|SUCC_BURM1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|160341262|gb|ABX14348.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189335427|dbj|BAG44497.1| succinyl-CoA synthetase beta chain [Burkholderia multivorans ATCC
           17616]
          Length = 388

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|221211337|ref|ZP_03584316.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD1]
 gi|221168698|gb|EEE01166.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD1]
          Length = 388

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|186470719|ref|YP_001862037.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
 gi|184197028|gb|ACC74991.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
          Length = 395

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 246/396 (62%), Gaps = 12/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL  + VP+ +G V  +   A      L G  + VK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKDLLAGFGVPIQRGAVAYTPDQAVYCATELGGWHWAVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V      + G  L+T QTGP G  V  VYVE      RE+YL
Sbjct: 58  -------GGIKLCETYHDVHEAATSLFGKHLVTTQTGPEGKVVERVYVEVAEKFDREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  IAS QGGMDIE++    P+ + +++++P +G+       +   L L 
Sbjct: 111 GIVLDRKAERVRVIASAQGGMDIEDIVHTNPEAVHQIVVEPAVGLQPFQAREIAFGLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D +++EINPL++  + R+  LD+KISFDDN L+RH  + 
Sbjct: 171 IKQVSRAVSTIMGAYRAFRDLDATMVEINPLVVTTDDRVIALDAKISFDDNGLFRHPHVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD ++ED RE EA Q  L+Y+ LDG+IGC++NGAGLAMATMD IK  GG PANFLDVG
Sbjct: 231 EMRDAAQEDPREAEAAQFGLNYVGLDGDIGCIINGAGLAMATMDTIKYAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VAAAF+++ SD +V  +L+NIF GI RCD + +G++ A +   + +PLV+RL 
Sbjct: 291 GGASPERVAAAFRLVLSDQNVSAVLVNIFAGINRCDWVAEGVVQAAR--GLRVPLVVRLA 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G R+I ESGL +I A  L +AAQK V A K
Sbjct: 349 GTNVEEGRRIINESGLPIIAAESLLEAAQKAVEASK 384


>gi|300309992|ref|YP_003774084.1| succinyl-CoA synthetase, beta chain protein [Herbaspirillum
           seropedicae SmR1]
 gi|124483474|emb|CAM32610.1| Succinyl-CoA synthetase protein, beta chain protein [Herbaspirillum
           seropedicae]
 gi|300072777|gb|ADJ62176.1| succinyl-CoA synthetase, beta chain protein [Herbaspirillum
           seropedicae SmR1]
          Length = 386

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 186/386 (48%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ V V +G+   SV   E+A K L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVTVPRGIPCMSVDEVEAAAKELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +I+G  L+T QTGP G +V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVKEYANQIMGMQLVTHQTGPEGQKVRRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR S  V  +AS++GGMDIEEVA   P+KI  ++IDP+ G+T      +   + + 
Sbjct: 111 SLVTDRVSQKVVLMASSEGGMDIEEVAHSNPEKIHNVIIDPVDGLTDAQADDVAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          LYKA+ + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPAARKNLQGLYKAYWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  +K IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPELKAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +L+A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKLLADSGLPIISADSMEE 376


>gi|221200155|ref|ZP_03573198.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2M]
 gi|221206692|ref|ZP_03579704.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2]
 gi|221173347|gb|EEE05782.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2]
 gi|221180394|gb|EEE12798.1| succinyl-CoA synthetase, beta subunit [Burkholderia multivorans
           CGD2M]
          Length = 388

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|15889893|ref|NP_355574.1| succinyl-CoA synthetase subunit beta [Agrobacterium tumefaciens
           str. C58]
 gi|21264034|sp|Q8UC60|SUCC_AGRT5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|15157842|gb|AAK88359.1| succinyl-CoA synthetase beta chain [Agrobacterium tumefaciens str.
           C58]
          Length = 397

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 260/397 (65%), Positives = 323/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  D+KGGVR+  S++ V+S  R++LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + I+P  GV+  DVA++   LEL 
Sbjct: 121 SLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAINPEKGVSDADVAAISKALELD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+M+NG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GVAAEDAKALFPILYKAFNEKDMALLEVNPLIVMENGHLRVLDAKMSFDGNALFRHEDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLQVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +L+ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKLLNESGLAITAADDLDDAAKKIVAAING 397


>gi|254282544|ref|ZP_04957512.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           NOR51-B]
 gi|219678747|gb|EED35096.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           NOR51-B]
          Length = 389

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 189/390 (48%), Positives = 267/390 (68%), Gaps = 10/390 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ KAL  +Y +PV+ G  + +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKALFAEYGLPVSTGYAVDTPADAAAAAEKIGGDMWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   + LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSPEECSAFAEQWLGKNLVTYQTDENGQPVSRILVESCTDIAEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+KI + +IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIEKVAEETPEKILRAIIDPLVGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F DKD++L+E+NPL+I + G L  LD+K+  D NA+YRH DIQ
Sbjct: 171 GVQVKQFVTIFMGLAKLFTDKDLALIEVNPLVITEEGNLHCLDAKLGVDGNAVYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 AMHDPSQEDEREANAAEWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQK 390
           G N ++G +++A+SGLN++ A  L DAA++
Sbjct: 351 GNNAELGRKVLADSGLNILAASSLTDAAEQ 380


>gi|330445471|ref|ZP_08309123.1| succinyl-CoA synthetase, &beta subunit [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489662|dbj|GAA03620.1| succinyl-CoA synthetase, &beta subunit [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 388

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 184/385 (47%), Positives = 248/385 (64%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTPQQAAEAAGKIGGTKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   +    +  LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHETKDGIKQFAQNWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GGM+IE+VA++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRGSRRIVFMASTEGGMEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLEINPL+I  +  L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFTKIFMGLGKMFADYDLALLEINPLVITGDNNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ A+ EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAIAEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G   +A+SGLN+I A  L 
Sbjct: 351 GNNAEVGAAKLADSGLNIIAATSLT 375


>gi|296115264|ref|ZP_06833904.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295978167|gb|EFG84905.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 400

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 220/396 (55%), Positives = 285/396 (71%), Gaps = 1/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALLR + +PV  G V +S   A SA + L  PL VVK+QIHAGGRG G F 
Sbjct: 1   MNIHEYQAKALLRSFGMPVPDGRVATSAEDAVSAARELAAPLTVVKAQIHAGGRGAGHFA 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
               D +GGVR+  + +      R +L  TL+TKQTGP G  V  VY+E G DI RELYL
Sbjct: 61  GAG-DDRGGVRLARTAEEAGHAARAMLERTLVTKQTGPQGRIVRKVYIESGCDIARELYL 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G +A +AS++GGM+IEEVA  +P++I K +IDP +G+       L   L+L 
Sbjct: 120 SLLVDRANGRIAVVASSEGGMEIEEVAAAHPERILKAVIDPALGLCDYQSRDLAVKLDLT 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++     ++    Y AFC  D +++EINPLI+  +G L  LD+K+SFDD+ALYRH  + 
Sbjct: 180 GRSIRAFQNVVRAAYDAFCGLDAAIVEINPLIVTGSGDLLALDAKMSFDDSALYRHPHLA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED RE EA +H L+Y+ LDG+IGCMVNGAGLAMATMDIIK+ G +PANFLDVG
Sbjct: 240 ELRDEDEEDPREREAARHGLAYVGLDGSIGCMVNGAGLAMATMDIIKMEGESPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VAAAF+I+ SD +V+GIL+NIFGGIMRCDV+ + I++A ++  +N+PLV+RL 
Sbjct: 300 GGATTERVAAAFRILMSDRNVRGILVNIFGGIMRCDVIAEAIIAASRDTGLNVPLVVRLA 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  L+AESGL +I A DL DAA+KIV AV+
Sbjct: 360 GTNVERGRALLAESGLTIIPADDLGDAARKIVAAVR 395


>gi|15602145|ref|NP_245217.1| succinyl-CoA synthetase subunit beta [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|21264046|sp|Q9CNZ0|SUCC_PASMU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|12720512|gb|AAK02364.1| SucC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 388

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 198/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV KG    S   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAEYQLPVGKGYACKSADEAADAIKKLNGDVWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   + LG  L+T QT   G  VN +YVE+G+ I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFADQWLGQRLVTFQTDVNGQPVNTLYVEEGSSIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+ ST+GG++IEEVA+  P  + K+ IDPL G        L   L L+
Sbjct: 111 GAVLDRASQRVVFMVSTEGGVNIEEVAEKTPHLLHKMAIDPLTGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  + K F +KD++LLE+NPL++ K G L  LD+KI  D NALYR   ++
Sbjct: 171 GDQIKQFAHIFVQMAKMFVEKDLALLEVNPLVVTKEGNLLCLDAKIVVDSNALYRQPALK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A+ H L+Y+AL+GNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 AMQDPSQEDPREALAESHQLNYVALEGNIGCMVNGAGLAMGTMDIIKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSAVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SG+N+I A  L DAA + V A +G
Sbjct: 351 GNNAPLGREILANSGVNIIAANTLTDAAIQAVKAAEG 387


>gi|53803924|ref|YP_114179.1| succinyl-CoA synthase subunit beta [Methylococcus capsulatus str.
           Bath]
 gi|53757685|gb|AAU91976.1| succinyl-CoA synthase, beta subunit [Methylococcus capsulatus str.
           Bath]
          Length = 389

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 190/386 (49%), Positives = 254/386 (65%), Gaps = 12/386 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y VPV  G V  S   A S  + + G  +VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKELLKTYGVPVPDGAVAYSDAQAASVAEEIGGSRWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V      +LGS L+T QTGP GS V  ++VE  + I +E YL
Sbjct: 58  -------GGVKVAHSIEEVRQYADAMLGSHLVTHQTGPGGSLVQRLWVEQASHIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  IAS++GGM+IEEVAK+ P+KI K ++DP IG+       +   + L+
Sbjct: 111 GFVIDRGNQRITLIASSEGGMEIEEVAKETPEKIVKEVVDPAIGLLDFQCRKVATAIGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII--MKNGRLRVLDSKISFDDNALYRHLD 238
           G+       L   +Y+   DKD    EINPL I    +  L VLD+K +FDDNALYR   
Sbjct: 171 GKLMPQAVRLMKAIYRCMRDKDALQAEINPLAIVGESDESLMVLDAKFNFDDNALYRQRT 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I E+RD++EED +E+EA  H L+YIALDGNIGC+VNGAGLAMA++D I L+GG PANFLD
Sbjct: 231 ITEMRDLAEEDPKEVEASGHGLNYIALDGNIGCIVNGAGLAMASLDAITLHGGRPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  +KV  A +I+  D +V+ IL+NIF GI RCD + KG++ A   ++I +PL++R
Sbjct: 291 VGGGASPEKVTNACRIVLEDPNVRCILVNIFAGINRCDWIAKGLIQACDSLQIKVPLIVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDL 384
           L G NVD G +++AESGL+ ITA +L
Sbjct: 351 LAGTNVDEGRKILAESGLSFITAENL 376


>gi|262277898|ref|ZP_06055691.1| succinyl-CoA synthase, beta subunit [alpha proteobacterium HIMB114]
 gi|262225001|gb|EEY75460.1| succinyl-CoA synthase, beta subunit [alpha proteobacterium HIMB114]
          Length = 386

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 207/396 (52%), Positives = 276/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+K+  PV  G  + S+   E+A K +     V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKEILKKFGAPVPNGCPVFSLDELEAAAKKITTNKIVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++L  +  + +E+ G  L+T QTGP G  V  +Y+ED ++I +ELYL
Sbjct: 58  -------GGVKLVNNLNELKKEAKELFGKVLVTHQTGPQGREVKRLYLEDASEIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +  +AFI+S +GGMDIEEVA   P+KI    +     V  +DV  +     L 
Sbjct: 111 SCLVDRATSKIAFISSAEGGMDIEEVAAKTPEKIITTRVGIEDKVNDKDVLDILKPFNLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  DG  +   LY++    D +L+E+NPLI+ K+ ++  LD+KI+FDDNAL+RH +I 
Sbjct: 171 GNALEDGKKIVQALYQSLIKTDANLIEVNPLILTKDNKVICLDAKINFDDNALFRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED  EIEA +++L+YI LDG IGCMVNGAGLAMATMDII LYG  PANFLDVG
Sbjct: 231 ELRDQNEEDPMEIEASKYDLAYIKLDGQIGCMVNGAGLAMATMDIINLYGSEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFKII SD +VKGILINIFGGIMRCDV+ +G+++A KE ++NIPLV+RL 
Sbjct: 291 GGASKEKVTAAFKIILSDKNVKGILINIFGGIMRCDVIAEGVIAAAKETELNIPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G  ++  SGL +I A DL+DAA+KIV A+K
Sbjct: 351 GTNFEKGKEILNNSGLKIIPADDLNDAAKKIVEAIK 386


>gi|114706299|ref|ZP_01439201.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
 gi|114538160|gb|EAU41282.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
          Length = 395

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL ++ V + +G +  S   A      + G  + VK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLARHGVNLPRGGLAYSPEQAAYRASEIGGERWAVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S K+V     E+LG  L+T QTGP G  VN +Y+E+  DI +ELYL
Sbjct: 58  -------GGVKLCDSDKAVKQAAEEMLGKRLVTHQTGPEGKLVNRLYIEETVDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  +  IAS+ GGM++EE+A   P+ + K ++DP  G+       +   L L+
Sbjct: 111 GFVLDRKAERIMIIASSSGGMEVEEIADKEPESLIKTVVDPGHGLQEFQAREIAYNLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D     Y+AF D D S+LEINPL+I   G +  LD+K+SFD+NAL+R  +I 
Sbjct: 171 YKVVNRMVDTILGCYRAFRDYDGSMLEINPLVITGGGSVMALDAKMSFDENALFRRQEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ L+G IGC++NGAGLAMAT+D+IK+ GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRETFASDRGLSYVGLNGEIGCIINGAGLAMATLDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA +F+ +  D +VK I +NIF GI RCD + +G++ A KEV +++P+++RL 
Sbjct: 291 GGASPDRVAKSFRAVLQDENVKVIFVNIFAGINRCDWVAEGVIKAKKEVGVSLPIIVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++A+SG ++I A  L + A+K V A K
Sbjct: 351 GTNVEKGKQILADSGEDIIVADTLKEGAEKAVKAWK 386


>gi|315041433|ref|XP_003170093.1| succinyl-CoA ligase beta-chain [Arthroderma gypseum CBS 118893]
 gi|311345127|gb|EFR04330.1| succinyl-CoA ligase beta-chain [Arthroderma gypseum CBS 118893]
          Length = 444

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGEEAEAIAKKIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    ID   GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDAITTTPIDIHTGVTDEIAHNIATGLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 EQCVPEAVETIKKLYKVFMERDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  + LI+ESGL + +  DL  AA+K V   K V
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSKVV 428


>gi|15676852|ref|NP_273997.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis MC58]
 gi|21264052|sp|Q9JZP4|SUCC_NEIMB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|7226199|gb|AAF41365.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis MC58]
 gi|316985361|gb|EFV64310.1| succinyl-CoA synthetase beta chain [Neisseria meningitidis H44/76]
 gi|325140152|gb|EGC62679.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis CU385]
 gi|325200357|gb|ADY95812.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis H44/76]
          Length = 388

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|134296851|ref|YP_001120586.1| succinyl-CoA synthetase subunit beta [Burkholderia vietnamiensis
           G4]
 gi|189046899|sp|A4JHJ8|SUCC_BURVG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|134140008|gb|ABO55751.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           vietnamiensis G4]
          Length = 388

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 182/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKTIEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARTILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|116254170|ref|YP_770008.1| succinyl-CoA synthetase subunit beta [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|189081780|sp|Q1MAW1|SUCC_RHIL3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115258818|emb|CAK09924.1| putative succinyl-CoA synthetase beta chain [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 397

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 259/397 (65%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++    EL+
Sbjct: 121 SLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKAFELE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLEINPLI+MK+G LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKTLFPMLYKAFGEKDMALLEINPLIVMKDGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 VLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|325142236|gb|EGC64653.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           961-5945]
 gi|325198191|gb|ADY93647.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis G2136]
          Length = 388

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|89902704|ref|YP_525175.1| succinyl-CoA synthetase subunit beta [Rhodoferax ferrireducens
           T118]
 gi|122478171|sp|Q21RF9|SUCC_RHOFD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89347441|gb|ABD71644.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodoferax
           ferrireducens T118]
          Length = 388

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/384 (47%), Positives = 258/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR+  VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQAGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     EILG  L+T QTGP G +V  + +EDGADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSIDEVKKLAGEILGMQLVTHQTGPEGQKVRRLLIEDGADIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S + DR S  VA I S++GGM IE+VA D P+KI   ++DP  G+T      L + + + 
Sbjct: 111 SAVTDRASQRVAMIVSSEGGMSIEDVAHDTPEKIITEIVDPATGLTVAQATKLANAIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   +YK + D D SL+EINP+I+  NG ++ +D+K +FDDNAL+RH +I 
Sbjct: 171 AGSTAQAVDVLQKVYKVYMDTDASLVEINPMILEGNGNIKAIDAKFNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+G +PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + +VK IL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPNVKVILVNIFGGIMKCDTIAAGVIAACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G +L+AESGL +I+A  +
Sbjct: 351 GTNEELGKKLLAESGLPIISADTM 374


>gi|187925265|ref|YP_001896907.1| succinyl-CoA synthetase subunit beta [Burkholderia phytofirmans
           PsJN]
 gi|226734932|sp|B2SYE8|SUCC_BURPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187716459|gb|ACD17683.1| succinyl-CoA synthetase, beta subunit [Burkholderia phytofirmans
           PsJN]
          Length = 389

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYSEQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  +  +AS++GGMD+EEVA+  P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADSMEE 376


>gi|288819190|ref|YP_003433538.1| succinyl-CoA synthetase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|46849523|dbj|BAD17851.1| succinyl-CoA synthetase large subunit [Hydrogenobacter
           thermophilus]
 gi|288788590|dbj|BAI70337.1| succinyl-CoA synthetase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308752772|gb|ADO46255.1| succinyl-CoA synthetase, beta subunit [Hydrogenobacter thermophilus
           TK-6]
          Length = 383

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/395 (46%), Positives = 262/395 (66%), Gaps = 14/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +L++YN+PV +G V  S+  A    + L G   VVK+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKEILKRYNLPVPEGKVAFSLQEALQVAEELSGYPLVVKAQVHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +   +  +LG  L T Q  P G  V+ V++E   +I +E YL
Sbjct: 58  -------GGVKLVKNQEELREAVESMLGKVLKTFQC-PEGKPVSRVWIEKATNIEKEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR+     F+AS +GGM+IEEVAK+ P+ I  L IDP +G+       +   L L 
Sbjct: 110 SITLDRSVSKPVFMASAEGGMEIEEVAKEKPEAIHTLHIDPALGLMPFQARKIAFKLGLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   LYK + D D SL+EINPL++ K G L +LD+K+  DDNA+ RH D++
Sbjct: 170 ---VNEFVRISLALYKMYTDMDASLVEINPLVLTKEGNLILLDAKVEIDDNAMLRHKDVE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D+++ D  EIEAK+++L+YI LDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 227 ELEDLTQLDPLEIEAKRYSLNYIKLDGNIGCMVNGAGLAMTTMDIIKLAGGDPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A AF+I+ +D +VK + INIFGGI+RCD L +G++ A K V+I +P+V+R+E
Sbjct: 287 GGANVEQIANAFRILMADKNVKAVFINIFGGILRCDRLAQGLIEAAKMVEIKVPVVVRME 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G RL++ESGLN + A+D+ D A+K     
Sbjct: 347 GTNVEEGRRLLSESGLNFVNAVDMWDGAKKATELA 381


>gi|302036210|ref|YP_003796532.1| succinyl-CoA synthetase subunit beta [Candidatus Nitrospira
           defluvii]
 gi|300604274|emb|CBK40606.1| Succinyl-CoA synthetase, beta subunit [Candidatus Nitrospira
           defluvii]
          Length = 392

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 208/397 (52%), Positives = 275/397 (69%), Gaps = 13/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  ++ VPV +G  I+S  AA +    L  P++VVK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKQLFAQFGVPVPRGKEITSPEAAAAWASELNTPVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     +V    +E++G TLIT QTGP G +V+ + +E+GA+I +ELYL
Sbjct: 58  -------GGVKITKEKGAVAGIAKELIGKTLITHQTGPKGRKVHRLLLEEGANIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +G   FIAST+GGM+IEEVA+  P+KI K  IDP +G    +  ++   L LQ
Sbjct: 111 SILVDRDTGWPTFIASTEGGMEIEEVAEKTPEKIIKEAIDPAVGFQGHNGRNVAFALGLQ 170

Query: 181 GQ---ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                       +  NLY+ F +K  +L+EINPLII K   L  LD K+SFDDN +++H 
Sbjct: 171 AMEPAVINPFVQMLGNLYRLFMEKHAALVEINPLIITKEKTLVALDGKVSFDDNGVFKHD 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+Q++RD++EED  EIEA  +NL+Y+ LDGNIGCMVNGAGLAMATMD+IKL G  PANFL
Sbjct: 231 DVQKMRDLNEEDPLEIEATANNLNYVKLDGNIGCMVNGAGLAMATMDVIKLAGSEPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA +D VAA F+I+  D +VKGI INIFGGI+RC+ +  G++ A KEVKI +PLV+
Sbjct: 291 DVGGGATKDTVAAGFRILLKDPNVKGIFINIFGGIVRCERIAHGVIEAAKEVKITVPLVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           RL+G N D G +L+AESGL +  A DL +AAQKIV  
Sbjct: 351 RLQGTNADEGRKLLAESGLKLEVANDLWEAAQKIVKL 387


>gi|198433734|ref|XP_002131576.1| PREDICTED: similar to succinate-Coenzyme A ligase, ADP-forming,
           beta subunit [Ciona intestinalis]
          Length = 447

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 176/397 (44%), Positives = 247/397 (62%), Gaps = 5/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL++  +P   G V S+   A +  K L     VVK+Q+ AGGRGKG F 
Sbjct: 35  LSIHEYLSLGLLKEAGIPTPNGDVASTPEEAYNIAKNLSTSDSVVKAQVLAGGRGKGHF- 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S   V     ++LG+ LITKQTG  G   N V V +   + RE Y 
Sbjct: 94  --TSGLQGGVKIVYSPDEVKEVASQMLGNKLITKQTGQKGRICNKVLVVERKYVRREFYF 151

Query: 121 SLLVDRTSG--MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           ++ ++R +       I S QGGMDIE VA   P+ I K  +D   G T E   +L   + 
Sbjct: 152 AITMERGTKQFGPVLIGSAQGGMDIEAVASKTPEAILKEYVDINNGCTEEQAVNLAKRMG 211

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                     D    +YK F  KD SL+EINP+    +G +  +D+K++FDDNA +R  +
Sbjct: 212 FTDSNCHQAADCILKMYKLFIAKDASLIEINPMAEDSDGNVMCMDAKLNFDDNAAHRQKE 271

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED R+ +A + +++YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 272 IFNLRDWSQEDDRDAQAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLD 331

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  D+V  AFK+ITSD +V  IL+NIFGGIMRCDV+ +GI+ A +++ + IP+++R
Sbjct: 332 VGGGATADQVMEAFKLITSDENVNSILVNIFGGIMRCDVIAQGIIQAAQQLDLKIPIIVR 391

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           L+G  V+    LIA+S L ++T   L++AA+ +V   
Sbjct: 392 LQGTKVEDAKALIAQSQLKILTCDSLNEAAKMVVKLS 428


>gi|261377713|ref|ZP_05982286.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria cinerea
           ATCC 14685]
 gi|269145988|gb|EEZ72406.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria cinerea
           ATCC 14685]
          Length = 388

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFIENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|296818131|ref|XP_002849402.1| succinyl-CoA ligase beta-chain [Arthroderma otae CBS 113480]
 gi|238839855|gb|EEQ29517.1| succinyl-CoA ligase beta-chain [Arthroderma otae CBS 113480]
          Length = 446

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 248/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGDEAEAIAKKIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAKD P  I    I+   GVT E    +   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDAITTTPINIHTGVTDEIARDIATGLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 211 EQCIPEAMETIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  + LI+ESGL + +  DL  AA+K V   K V
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSKVV 428


>gi|115352747|ref|YP_774586.1| succinyl-CoA synthetase subunit beta [Burkholderia ambifaria AMMD]
 gi|170703538|ref|ZP_02894293.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           IOP40-10]
 gi|171319344|ref|ZP_02908455.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           MEX-5]
 gi|172061611|ref|YP_001809263.1| succinyl-CoA synthetase subunit beta [Burkholderia ambifaria
           MC40-6]
 gi|122322312|sp|Q0BC71|SUCC_BURCM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734928|sp|B1YVY6|SUCC_BURA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115282735|gb|ABI88252.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           ambifaria AMMD]
 gi|170131550|gb|EDT00123.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           IOP40-10]
 gi|171095451|gb|EDT40421.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           MEX-5]
 gi|171994128|gb|ACB65047.1| succinyl-CoA synthetase, beta subunit [Burkholderia ambifaria
           MC40-6]
          Length = 388

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|107023585|ref|YP_621912.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia AU
           1054]
 gi|116690669|ref|YP_836292.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia
           HI2424]
 gi|170734013|ref|YP_001765960.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia
           MC0-3]
 gi|254247313|ref|ZP_04940634.1| Succinyl-CoA synthetase, beta subunit [Burkholderia cenocepacia
           PC184]
 gi|123244727|sp|Q1BTW6|SUCC_BURCA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189046893|sp|A0KA72|SUCC_BURCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734929|sp|B1JY14|SUCC_BURCC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|105893774|gb|ABF76939.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           cenocepacia AU 1054]
 gi|116648758|gb|ABK09399.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Burkholderia
           cenocepacia HI2424]
 gi|124872089|gb|EAY63805.1| Succinyl-CoA synthetase, beta subunit [Burkholderia cenocepacia
           PC184]
 gi|169817255|gb|ACA91838.1| succinyl-CoA synthetase, beta subunit [Burkholderia cenocepacia
           MC0-3]
          Length = 388

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|3821927|gb|AAC69705.1| ATP-specific succinyl-CoA synthetase beta subunit [Columba livia]
          Length = 413

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 168/398 (42%), Positives = 245/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  GVV  +   A    K +     V+K+Q+ AGGRGKG F+
Sbjct: 3   LSLHEYLSMGLLQEAGISVPHGVVARTPDEAYKIAKEIGSKDLVIKAQVLAGGRGKGTFE 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +   +    ++G  L TKQTG  G   N V+V +     RE Y 
Sbjct: 63  ---GGLKGGVKIVFSPEEAKAVSSRMIGKKLFTKQTGEKGRICNQVFVCERRYPRREYYF 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P  I K  ID + G+  E    L   +   
Sbjct: 120 AITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQAVRLAQKMGFP 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 180 SNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +++D ++ED R+ +A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 240 DMQDWTQEDERDRQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK++ + IP+V+RL+
Sbjct: 300 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVVAVKDLDLKIPVVVRLQ 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LI  SGL ++   DLD+AA+ +V   + V
Sbjct: 360 GTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIV 397


>gi|88811120|ref|ZP_01126376.1| succinyl-CoA synthase, beta subunit [Nitrococcus mobilis Nb-231]
 gi|88791659|gb|EAR22770.1| succinyl-CoA synthase, beta subunit [Nitrococcus mobilis Nb-231]
          Length = 389

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 188/387 (48%), Positives = 261/387 (67%), Gaps = 12/387 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  ++ +P+ +G V  SV  A  A + + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKHLFSRFGIPIPRGYVARSVAEARKAAEQIGGDRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  +      +LG+ L+T Q+   G  VN V +E+G DI RELYL
Sbjct: 58  -------GGVKLAGSLDELTQYTESMLGTRLVTAQSPTKGLPVNAVLIEEGLDIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  + F+AS  GGMDIEEVA  +P++I    ++P++G+ +     L   L L+
Sbjct: 111 SALVDRVSKRILFMASAAGGMDIEEVAAHHPERILTARVNPVVGLQAYQCRQLAFGLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL--YRHLD 238
           G+   +   +  +LY  F ++D+SL+EINPLI+     L  LD+KI+ DDNA+   R  +
Sbjct: 171 GKRVGEWVKIMLSLYHCFIERDLSLIEINPLILTTQDELLALDAKINVDDNAVAVGRQPE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I ++RD+S+ED  EI A QH L+YI L GNIGCMVNGAGLAMATMD+IKL GG PANFLD
Sbjct: 231 IADMRDLSQEDETEIRAAQHGLNYITLGGNIGCMVNGAGLAMATMDVIKLCGGEPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG   ++V  AFK+I S   VK IL+NIFGGI+RCD++ +GI++AVKEV +++P+++R
Sbjct: 291 VGGGTSTERVTEAFKLICSSPDVKAILVNIFGGIVRCDMIAEGIINAVKEVGVSVPVIVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLD 385
           LEG NV+ G  L+AES L++I A +L 
Sbjct: 351 LEGTNVERGKELLAESELDIIAAGNLT 377


>gi|325134125|gb|EGC56777.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis M13399]
 gi|325144250|gb|EGC66555.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M01-240013]
 gi|325206211|gb|ADZ01664.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M04-240196]
          Length = 388

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|84393476|ref|ZP_00992232.1| succinyl-CoA synthetase subunit beta [Vibrio splendidus 12B01]
 gi|84375904|gb|EAP92795.1| succinyl-CoA synthetase subunit beta [Vibrio splendidus 12B01]
          Length = 388

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 185/396 (46%), Positives = 257/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRELAFKLGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITNEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A+ L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAVSLTDAAQKVVAAAE 386


>gi|320586114|gb|EFW98793.1| succinyl-synthetase beta [Grosmannia clavigera kw1407]
          Length = 445

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 247/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+Q+  L+RKY + +  G V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 35  LSIHEHQSADLMRKYGIQIPDGAVARTGAEAEEVAKNISNGDLVIKAQVLAGGRGKGTFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 95  N---GLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAGGRLCNAVYICERKFARREFYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P+ I    ID   GVT E    +   L   
Sbjct: 152 AILMDRATQKPVIVSSSQGGMDIEAVAKENPEAINSTYIDIETGVTDEIARDIAVKLGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   DG D    LY+ F +KD + +EINPL    + ++  +D+K +FDDNA YR  ++ 
Sbjct: 212 EQCVEDGKDTIQKLYQIFKEKDATQIEINPLSETSDHKVMCMDAKFNFDDNAAYRQEEVF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED+ E+ A + NL++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 272 SWRDTSQEDAEEVRAAKSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITS+ +V  + +NIFGGI+RCD +  G+++ V+ + + IP++ RL+
Sbjct: 332 GGATPAAIKEAFELITSEQNVTAVFVNIFGGIVRCDAIAHGLINTVETLNLRIPIITRLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+  +++I ESGL + +  DL  AA+K V   K V
Sbjct: 392 GTNVEQAHQIINESGLKIFSIDDLQSAAEKAVQLSKVV 429


>gi|315633948|ref|ZP_07889237.1| succinyl-CoA ligase subunit beta [Aggregatibacter segnis ATCC
           33393]
 gi|315477198|gb|EFU67941.1| succinyl-CoA ligase subunit beta [Aggregatibacter segnis ATCC
           33393]
          Length = 389

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y +PV KG+   +   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFAEYKLPVGKGIACKTADEAAEAIKQLDGDVWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +YVE+G+ I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFANKWLGQRLVTFQTDANGQPVNTIYVEEGSQIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+ ST+GGM+IEEVA   P  + K+ IDPL G        L   L L+
Sbjct: 111 GAVLDRASQRVVFMVSTEGGMNIEEVAAKTPHLLHKMAIDPLTGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  + K F ++D+SLLE+NPL++ K G L  LD+KI  D NALYR   + 
Sbjct: 171 GDQVKQFAHIFTQMAKMFVERDLSLLEVNPLVVTKEGNLLCLDAKIVVDGNALYRQPALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A+   L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMQDPSQEDPREALAESFQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N  +G  ++A+SGLN+I A  L DAA + V A K
Sbjct: 351 GNNAPLGREILAKSGLNIIAAQTLTDAAVESVKAAK 386


>gi|332526924|ref|ZP_08403017.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
 gi|332111366|gb|EGJ11350.1| succinyl-CoA synthetase subunit beta [Rubrivivax benzoatilyticus
           JA2]
          Length = 386

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 189/384 (49%), Positives = 258/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR + VPV +G    +V  A  A + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQAKELLRAHGVPVPRGYAAFTVQEALEAAQKLGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L+T QTGP G +V  + VE+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLARSLAEVETLASQILGMQLVTHQTGPEGQKVRRLLVEEGADIRKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + L DR +  VA +AS++GGMDIEEVA   P+KI K+ +DPL+G+T      L   + + 
Sbjct: 111 AALTDRATQKVALMASSEGGMDIEEVAHATPEKILKVFVDPLVGLTEAQARELAVGIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +R    D+F  LY  +   D SL EINPLI+  +G ++ LD+K +FD NAL+RH +I 
Sbjct: 171 EASRAQAVDVFQKLYACYMASDASLAEINPLILEGHGGIKALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD + +G+++A K V + +PLV+R++
Sbjct: 291 GGASAEKVTEAFKIMLKNPEVKGILVNIFGGIMKCDTIAEGVIAACKAVNLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N D+G +++A+SGL +I A  +
Sbjct: 351 GTNEDLGKKMLADSGLPIIAADTM 374


>gi|299755136|ref|XP_001828454.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130]
 gi|298411086|gb|EAU93446.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130]
          Length = 416

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 247/396 (62%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K V   +   A    K       V+K+Q+ AGGRGKG F 
Sbjct: 23  LSIHEYQSMKLLNSYGIPTPKSVAAHTPEEAYQVAKNFGTDKLVIKAQVLAGGRGKGHFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV +  S +       +++GS LITKQTG  G   N V + +      E Y+
Sbjct: 83  ---TGLQGGVHMVDSAEQAKDFASKMIGSKLITKQTGAGGRICNAVMLAERRQPEHEYYV 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DRT+  V  +AS QGGM+IEEVA   P  I    ID   G++  +  ++   L  +
Sbjct: 140 AVLNDRTTQGVVLVASAQGGMNIEEVAAKDPSAIITTPIDFEKGLSKPEAIAIAQKLGFK 199

Query: 181 GQA-RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +  + +  D+F NLY+ F +KD + +EINP+ + K+G +  +D+K  FDDNA +R  ++
Sbjct: 200 DEQTQSEAADIFINLYRIFKEKDATQIEINPMALTKDGAVLCMDAKFGFDDNAEFRQQEV 259

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD+S+E+  E+EA++ NL++I LDG+IGC+VNGAGLAMATMD++ L+GG PANFLDV
Sbjct: 260 FSLRDISQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFLDV 319

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V  AF+I+ +D  VK I INIFGGIMRCD + +G++ A KE+ +NIPLV+RL
Sbjct: 320 GGGATPETVKKAFEILLADPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLNIPLVVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +G       ++I +SGL +I    LD+AA+K V   
Sbjct: 380 KGTKEAEAKQMIKDSGLTIIPFDSLDEAAEKAVQLA 415


>gi|253996049|ref|YP_003048113.1| succinyl-CoA synthetase subunit beta [Methylotenera mobilis JLW8]
 gi|253982728|gb|ACT47586.1| succinyl-CoA synthetase, beta subunit [Methylotenera mobilis JLW8]
          Length = 387

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 207/395 (52%), Positives = 267/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+KY +PV +G V++           +    +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKTLLQKYGIPVPRGQVVAVAKETVGVTTEIASDGWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S     +   E+LG TL+T Q  P G  VN V VE+   I RELYL
Sbjct: 58  -------GGVKVVKSAAEAQNVAGELLGKTLVTYQNAPDGQPVNQVLVEETLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT   V  +AS  GGMDIEE+A   P+KI + + DPL G+      +L   L+L 
Sbjct: 111 SMLVDRTLERVVVVASVAGGMDIEEIAHTSPEKILQEVCDPLNGLVDFQARNLAFKLDLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F D D++LLEINPL++  +G+L  LD K+S DDNALYR   + 
Sbjct: 171 GDQIGAFTKLLKGLYRLFKDNDLALLEINPLVVTTDGKLYALDCKMSVDDNALYRQKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S+EDS+E  A    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 EQRDWSQEDSKEAVAHHAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGMPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AFKII +DS+VK IL+NIFGGIMRCD++ +GI++AV+EV + IP+++RLE
Sbjct: 291 GGATAETVAKAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVREVGMQIPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD+G +++  SGLN+I+A  L DAAQ+ V AV
Sbjct: 351 GTNVDLGKKMLQTSGLNIISAEGLTDAAQQAVKAV 385


>gi|319942903|ref|ZP_08017186.1| succinyl-CoA ligase subunit beta [Lautropia mirabilis ATCC 51599]
 gi|319743445|gb|EFV95849.1| succinyl-CoA ligase subunit beta [Lautropia mirabilis ATCC 51599]
          Length = 388

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 182/384 (47%), Positives = 256/384 (66%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +L++Y V V +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILKRYGVTVPRGIPCFNVEEAVKAAEQLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V      ILG  L+T QTGP G +V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKLARSLDEVRQHATSILGMQLVTHQTGPEGQKVRRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  +  +AS++GGMDIEEVA   P+KI K+  D   G+T  +   L   + + 
Sbjct: 111 GIVIDRQSQKICVMASSEGGMDIEEVAAKTPEKIHKVFCDVAQGLTDAEADDLATRIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPLI+  +G +  LD+K++FD NAL+RH DI 
Sbjct: 171 AASLPKARQVLQGLYKAFFETDASLAEINPLILTGSGDVIALDAKLNFDSNALFRHADIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EED  E+EA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG+PANFLDVG
Sbjct: 231 EMRDLDEEDPAEVEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  VK IL+NIFGGIMRCD +  G+++A K V +++PLV+R++
Sbjct: 291 GGATAEKVTEAFKLMLKNKGVKAILVNIFGGIMRCDTIAAGVIAASKAVNLSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G +++A+SGL +I A  +
Sbjct: 351 GTNEELGKQMLADSGLPIIAADTM 374


>gi|308389603|gb|ADO31923.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           meningitidis alpha710]
 gi|325130103|gb|EGC52886.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           OX99.30304]
 gi|325136106|gb|EGC58715.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis M0579]
          Length = 388

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|149914671|ref|ZP_01903201.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
 gi|149811464|gb|EDM71299.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
          Length = 394

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL+++ V V +G +  S   A      L G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGERWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ S+ + +    + +LG  L+T QTGP G  V+ +YVE+  +I +E+YL
Sbjct: 58  -------GGVRICSTEEEIADAAQWMLGRKLVTHQTGPQGKLVSRLYVEEATNIAQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  +AS QGGM+IEE++ + P  I + ++DP +G+ +     +   L L+
Sbjct: 111 GLVMDRKLERVVVVASAQGGMEIEEISANEPDSIIRSVVDPAVGMQAFQAREIAFSLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y    + D +++E+NP+++ ++G +  LD+KISFDDNAL+R  +I 
Sbjct: 171 PPMIAQAVKTILGCYALMSEMDANMVEVNPMVVTRSGEIVALDAKISFDDNALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED+RE  A+   LSYI LDG IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDTRETFAEDRGLSYIGLDGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  +FK + +D +V+ IL+NIF GI RCD + +G++ A++E+++++P+V+RL 
Sbjct: 291 GGASPDRVLMSFKAVLNDPNVEAILVNIFAGINRCDWIAEGVVRAMRELELHMPVVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++AESGL VI A  L DAA K+V A K
Sbjct: 351 GTNVEEGRKILAESGLAVIPAETLADAADKVVGAWK 386


>gi|16273116|ref|NP_439352.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae Rd
           KW20]
 gi|260581104|ref|ZP_05848925.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae RdAW]
 gi|1174473|sp|P45101|SUCC_HAEIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1574125|gb|AAC22850.1| succinyl-CoA synthetase, beta subunit (sucC) [Haemophilus
           influenzae Rd KW20]
 gi|260092233|gb|EEW76175.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae RdAW]
          Length = 389

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGGKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDRTS  V FIAS++GGM+IEEV ++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++   G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTPQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAESDVNILTAQSLQQAAELAVNAAKG 387


>gi|319637660|ref|ZP_07992426.1| succinyl-CoA ligase subunit beta [Neisseria mucosa C102]
 gi|317400815|gb|EFV81470.1| succinyl-CoA ligase subunit beta [Neisseria mucosa C102]
          Length = 388

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|238028530|ref|YP_002912761.1| succinyl-CoA synthetase subunit beta [Burkholderia glumae BGR1]
 gi|237877724|gb|ACR30057.1| Succinyl-CoA synthase, beta subunit [Burkholderia glumae BGR1]
          Length = 388

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 182/386 (47%), Positives = 258/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEALKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYASQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  +AS++GGMDIEEVA+  P+ + K+ ++P  G+   +   L   + + 
Sbjct: 111 GIVIDRVTQKVVVMASSEGGMDIEEVAEKTPEALHKVAVEPSKGLQDAEADELATKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +  NLYKAF + D SL EINPL++  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASLPQARAILQNLYKAFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLGVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|161869871|ref|YP_001599040.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis
           053442]
 gi|189081757|sp|A9M4F8|SUCC_NEIM0 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161595424|gb|ABX73084.1| succinyl-CoA synthetase beta subunit [Neisseria meningitidis
           053442]
          Length = 388

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILARNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|149201848|ref|ZP_01878822.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149144896|gb|EDM32925.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 396

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 172/394 (43%), Positives = 250/394 (63%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHE+QAK LL+++ V V +G +  S   A      L G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEFQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGDRWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +   +    + +LG  L+T QTGP G  V+ +Y+E+   I +E+YL
Sbjct: 58  -------GGVRICKNETEISEAAQWMLGRMLVTHQTGPQGKLVSRLYIEEATSIAQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR    V  +AS QGGM+IEE++   P+ I + ++DP +G+ +     +   L L 
Sbjct: 111 AFVMDRKEERVVVVASGQGGMEIEEISAQEPESIIRSVVDPAVGMQAFQAREIAFSLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+   + D +++EINPL++  +G +  LD+K+SFDDNAL+R  +I 
Sbjct: 171 AALIPQAVKTIIGCYRMMEETDANMVEINPLVVTTSGEIMALDAKVSFDDNALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+EDSRE  A    L+YI L G IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDSRETFASDRGLNYIGLTGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V  +F  + +D +V+ IL+NIF GI RCD + +G++ AV+E+ + +PLV+RL 
Sbjct: 291 GGASPDRVLMSFNAVLNDRNVEAILVNIFAGINRCDWIAEGVIRAVRELNLTLPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G RLIA+SGL ++TA  L +AA  +V A
Sbjct: 351 GTNVEEGRRLIADSGLPILTAETLAEAADLVVRA 384


>gi|218768042|ref|YP_002342554.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis Z2491]
 gi|304387736|ref|ZP_07369916.1| succinyl-CoA ligase subunit beta [Neisseria meningitidis ATCC
           13091]
 gi|21264051|sp|Q9JUT0|SUCC_NEIMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|121052050|emb|CAM08359.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           meningitidis Z2491]
 gi|254669447|emb|CBA03309.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha153]
 gi|254672882|emb|CBA07159.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha275]
 gi|261392694|emb|CAX50267.1| succinyl-CoA synthetase beta chain (SCS-beta) [Neisseria
           meningitidis 8013]
 gi|304338212|gb|EFM04342.1| succinyl-CoA ligase subunit beta [Neisseria meningitidis ATCC
           13091]
 gi|325202254|gb|ADY97708.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M01-240149]
 gi|325207993|gb|ADZ03445.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           NZ-05/33]
          Length = 388

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|194221148|ref|XP_001495054.2| PREDICTED: succinate-CoA ligase, GDP-forming, beta subunit [Equus
           caballus]
          Length = 447

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 53  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKKLNAKEIVLKAQILAGGRGKGVF- 111

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 112 --SSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 170 AILMDRASNGPVLVGSPQGGVDIEEVAATNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 230 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 290 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 350 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 410 GTNVHEAQNILNNSGLPITSAVDLEDAAKKAVASV 444


>gi|225555061|gb|EEH03354.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus G186AR]
 gi|240281269|gb|EER44772.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus H143]
 gi|325092238|gb|EGC45548.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus H88]
          Length = 444

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKTYGVGVPKGEVARTAEEAEAVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P  I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIETVAKETPDAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCLEEAKNTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDPDEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + AAF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRAAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + LI ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSKVV 428


>gi|206559349|ref|YP_002230110.1| succinyl-CoA synthetase subunit beta [Burkholderia cenocepacia
           J2315]
 gi|226734930|sp|B4EBY6|SUCC_BURCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|198035387|emb|CAR51263.1| succinyl-CoA synthetase beta chain [Burkholderia cenocepacia J2315]
          Length = 388

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I K++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V +N+PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|329906524|ref|ZP_08274406.1| Succinyl-CoA ligase (ADP-forming) beta chain [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547280|gb|EGF32126.1| Succinyl-CoA ligase (ADP-forming) beta chain [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 388

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRKY V   +G+  ++V  A  A +TL GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKYGVTTPRGIPCNTVEDAVKAAETLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L+ V      ILG  L+T QT P G +V  + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKTLEQVREYATAILGMQLVTHQTSPEGQQVRRLLIEEGADIAKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  V  +AS++GGMDIEEVA+ +P+ +  + IDP +G+T  +   +   + + 
Sbjct: 111 SLVTDRVTQRVVLMASSEGGMDIEEVAESHPELLHHIAIDPAVGLTDAEADGIAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             + +D       LYKA+ + D +L EINPLI+  +G++  LD+K +FD NALYR  +I 
Sbjct: 171 AASIVDARTQLQGLYKAYWETDAALAEINPLILTGSGKVIALDAKFNFDANALYRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED+ E+EA + +L+YI+LDG+IGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDAAEVEASKFDLAYISLDGDIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  +K IL+NIFGGIM+CDV+ +G++ A K V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPGLKAILVNIFGGIMKCDVIAEGVIVASKAVSLTVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G +++AESGL +I A  ++DAA+++V A K
Sbjct: 351 GTNEDLGKKMLAESGLPIIAADTMEDAARQVVAAAK 386


>gi|54038306|gb|AAH84473.1| LOC496495 protein [Xenopus (Silurana) tropicalis]
          Length = 420

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 240/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 26  LNLQEYQSKKLMADHGVTVQRFFVADNANDALDAAKRLKAREIVLKAQILAGGRGKGTFD 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +V+ V V +  DI RE YL
Sbjct: 86  ---SGLKGGVHLTKDPNKVEELTKQMIGYNLTTKQTVAGGVKVHKVMVAEALDISRETYL 142

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGGMDIEEVA+  P+ IFK  ID   G+       + D L  +
Sbjct: 143 AILMDRACNGPVLVGSPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQALRMADNLGFK 202

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    +    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 203 GPLQQQAAEQIKRLYHLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE D  E EA  ++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 263 AMDDTSETDPIENEANSYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 323 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV    R++AESGL + +A DLDDAA+K V ++
Sbjct: 383 GTNVHEAKRILAESGLPITSANDLDDAARKAVASI 417


>gi|325132159|gb|EGC54855.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis M6190]
 gi|325138091|gb|EGC60664.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis ES14902]
          Length = 388

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|186475211|ref|YP_001856681.1| succinyl-CoA synthetase subunit beta [Burkholderia phymatum STM815]
 gi|184191670|gb|ACC69635.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
           STM815]
          Length = 389

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 260/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G  + SV  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPVFSVDDAVKAAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL+ V     +ILG  L+T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  V  +AS++GGMDIEEVA   P+ I K+ +DP  G+   +   L   + + 
Sbjct: 111 GLVIDRVSQKVVVMASSEGGMDIEEVAAKTPEAIHKVAVDPSKGLLDAEADDLAKKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKA  + D SL EINPLI+  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 DASIPQARTILQGLYKATWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + ++  IL+NIFGGIMRCDV+ +G+++A K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVDLQVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++A+SGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLADSGLPIISADSMEE 376


>gi|148978240|ref|ZP_01814758.1| succinyl-CoA synthetase subunit beta [Vibrionales bacterium SWAT-3]
 gi|145962541|gb|EDK27818.1| succinyl-CoA synthetase subunit beta [Vibrionales bacterium SWAT-3]
          Length = 388

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/396 (46%), Positives = 255/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGFACDTAQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L + F   D++LLEINPL+I   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +V  +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVSAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D+G  ++A S +++I A  L DAAQK+V A +
Sbjct: 351 GTNADLGREVLANSDVDIIAAESLTDAAQKVVAAAE 386


>gi|309380079|emb|CBX21490.1| putative succinyl-CoA synthetase beta subunit [Neisseria lactamica
           Y92-1009]
          Length = 388

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|242238592|ref|YP_002986773.1| succinyl-CoA synthetase subunit beta [Dickeya dadantii Ech703]
 gi|242130649|gb|ACS84951.1| succinyl-CoA synthetase, beta subunit [Dickeya dadantii Ech703]
          Length = 388

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 187/386 (48%), Positives = 254/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEKWLGKHLVTYQTDANGQPVNQILVESATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L 
Sbjct: 111 GAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLAGPQPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  +++
Sbjct: 171 GKQIAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGVDGNALFRQPELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED+RE  A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMRDASQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD  V  +L+NIFGGI+RCD++  GI+ AV EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDKVNAVLVNIFGGIVRCDLIADGIIGAVSEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAQKLADSGLNIIAATSLTD 376


>gi|319410291|emb|CBY90633.1| succinyl-CoA synthetase beta chain (SCS-beta) [Neisseria
           meningitidis WUE 2594]
          Length = 388

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF D D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVDNDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAGKIVAAV 386


>gi|259483689|tpe|CBF79284.1| TPA: succinyl-CoA synthetase beta subunit, putative
           (AFU_orthologue; AFUA_4G04520) [Aspergillus nidulans
           FGSC A4]
          Length = 440

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 180/398 (45%), Positives = 249/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE   K+L     V+K+Q+ AGGRGKG F 
Sbjct: 30  LSIHEYLSANLLKSYGVGVPKGEVARSAEEAEKVAKSLGNDDMVIKAQVLAGGRGKGHFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N V++ +     RE YL
Sbjct: 90  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAGGRLCNAVFIVERKFARREFYL 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK+ P  I    ID  +GVT      + + L   
Sbjct: 147 AVLMDRKTQGPVIVASSQGGMDIEAVAKENPDAIITTPIDINVGVTDAIATKIANELGFS 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYKAF + D + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 207 EQCVDDAKKTIQNLYKAFMETDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 267 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 326

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 327 GGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVARLQ 386

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI ESGL + +  DL  AA+K V   K V
Sbjct: 387 GTNMEQAHKLINESGLKIFSIEDLQSAAEKSVQFSKVV 424


>gi|85706354|ref|ZP_01037448.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
 gi|85669127|gb|EAQ23994.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
          Length = 396

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 172/394 (43%), Positives = 250/394 (63%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHE+QAK LL+++ V V +G +  S   A      L G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEFQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGDRWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +    + +LG  L+T QTGP G  V+ +Y+E+   I +E+YL
Sbjct: 58  -------GGVKICKNEIEISEAAQWMLGRMLVTHQTGPQGKLVSRLYIEEATSIAQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR    V  +AS QGGM+IEE++   P+ I + ++DP +G+ +     +   L L 
Sbjct: 111 AFVMDRKEERVVVVASGQGGMEIEEISAQEPESIIRSVVDPAVGMQAFQAREIAFSLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+   + D S++EINPL++  +G +  LD+K+SFDDNAL+R  +I 
Sbjct: 171 AALIPQAVKTIIGCYRMMEETDASMVEINPLVVTTSGEIMALDAKVSFDDNALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    L+YI L+G IGC+VNGAGLAMAT+D+IK+ GG PANFLDVG
Sbjct: 231 ELRDKSQEDPRETFAGDRGLNYIGLEGEIGCIVNGAGLAMATLDMIKMAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  +F  + +D +V+ IL+NIF GI RCD + +G++ AV+E+ + +PLV+RL 
Sbjct: 291 GGASPERVLMSFNAVLNDRNVEAILVNIFAGINRCDWIAEGVIRAVRELNLTLPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G RLIAESGL ++TA  L DAA  +V A
Sbjct: 351 GTNVEEGRRLIAESGLPILTAETLADAADLVVRA 384


>gi|157826590|ref|YP_001495654.1| succinyl-CoA synthetase subunit beta [Rickettsia bellii OSU 85-389]
 gi|189081784|sp|A8GUV0|SUCC_RICB8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157801894|gb|ABV78617.1| succinyl-CoA synthetase subunit beta [Rickettsia bellii OSU 85-389]
          Length = 385

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 202/395 (51%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + GVV++   +  +AI  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDKLNTKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+ +     +   L  +
Sbjct: 111 SVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++    YKAF + D + +EINPLI+ K G L  LD+K +FDDN L++H +I 
Sbjct: 171 DHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDAKFTFDDNGLFKHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED  E  A    LSY+ +DG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ALRDQDEEDPLETRAADAGLSYVKMDGSIGCMVNGAGLAMATMDIIKLYGATPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  +++ SGL +I A DL DAA KIV A+
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAASKIVEAI 385


>gi|313668599|ref|YP_004048883.1| succinyl-CoA synthetase beta subunit [Neisseria lactamica ST-640]
 gi|313006061|emb|CBN87522.1| putative succinyl-CoA synthetase beta subunit [Neisseria lactamica
           020-06]
          Length = 388

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|255065289|ref|ZP_05317144.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria sicca
           ATCC 29256]
 gi|261364254|ref|ZP_05977137.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria mucosa
           ATCC 25996]
 gi|298369259|ref|ZP_06980577.1| succinate-CoA ligase, beta subunit [Neisseria sp. oral taxon 014
           str. F0314]
 gi|255050710|gb|EET46174.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria sicca
           ATCC 29256]
 gi|288567496|gb|EFC89056.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria mucosa
           ATCC 25996]
 gi|298283262|gb|EFI24749.1| succinate-CoA ligase, beta subunit [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 388

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|261401146|ref|ZP_05987271.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria lactamica
           ATCC 23970]
 gi|269208924|gb|EEZ75379.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria lactamica
           ATCC 23970]
          Length = 388

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|312211090|emb|CBX91176.1| similar to succinyl-CoA ligase subunit beta [Leptosphaeria
           maculans]
          Length = 443

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 252/396 (63%), Gaps = 3/396 (0%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           IHEY++ ALL  Y + V KG V ++   AE   K + G   V+K+Q+ AGGRGKG F   
Sbjct: 35  IHEYRSAALLESYGIGVPKGGVATNAAEAEQIAKDIGGEDVVIKAQVLAGGRGKGTFDN- 93

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               KGGVRV  S +       +++G  LITKQTG  G   N V++ D     RE YL++
Sbjct: 94  --GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAI 151

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           L+DR S     +AS+QGGMDIE VAK++P+ I    ID  +GVT +   ++   L    Q
Sbjct: 152 LMDRASQGPVIVASSQGGMDIEAVAKEHPEAIITTPIDIHVGVTDDMARNIATELGFSEQ 211

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
              D  D    LY+ F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++   
Sbjct: 212 CIEDAKDTIQKLYRVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFSW 271

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           RDV++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GGAPANFLDVGGG
Sbjct: 272 RDVTQEDADEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVGGG 331

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + +  AF +ITSD  V  I +NIFGGI+RCD + KG++  V+E+ +  P++ RL+G 
Sbjct: 332 ATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQGT 391

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           N++  ++L+ +SGL + +  DL  AA+K V   K V
Sbjct: 392 NMEQAHKLLNDSGLKIFSIDDLQAAAEKSVQFSKVV 427


>gi|169609801|ref|XP_001798319.1| hypothetical protein SNOG_07991 [Phaeosphaeria nodorum SN15]
 gi|111063147|gb|EAT84267.1| hypothetical protein SNOG_07991 [Phaeosphaeria nodorum SN15]
          Length = 441

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 252/398 (63%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++ ALL  Y + V KG V ++   AE   K++ G   V+K+Q+ AGGRGKG F 
Sbjct: 31  LSIHEYRSAALLESYGIGVPKGGVATNAAEAEQVAKSIGGDDAVIKAQVLAGGRGKGTFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++G  LITKQTG  G   N V++ +     RE YL
Sbjct: 91  N---GFKGGVRVVYSPREAAILADQMIGHKLITKQTGAAGRLCNAVFIVERKFARREFYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    I+  +GVT E   ++   L   
Sbjct: 148 AILMDRGSQGPVIVASSQGGMDIETVAKENPEAIITTPINIHVGVTDEIARTIATELGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 208 EQCIEDAKDTIQKLYKVFMERDATQIEINPLSETTDHQVLAMDAKLGFDDNADFRQKEVF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 268 EWRDFTQEDPDEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  AF +ITSD  V  I +NIFGGI+RCD + +G++  V+++ +  P++ RL+
Sbjct: 328 GGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAQGLIQVVQQMNLKTPVIARLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++L+ +SGL + +  DL  AA+K V   K V
Sbjct: 388 GTNMEAAHKLLNDSGLKIFSIDDLQAAAEKSVQFSKVV 425


>gi|261187891|ref|XP_002620363.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis SLH14081]
 gi|239593480|gb|EEQ76061.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis SLH14081]
          Length = 444

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 244/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAGQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P+ I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIESVAKETPEAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + LI ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSKVV 428


>gi|145635045|ref|ZP_01790751.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           PittAA]
 gi|229844849|ref|ZP_04464987.1| transcriptional regulator CysB [Haemophilus influenzae 6P18H1]
 gi|145267653|gb|EDK07651.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           PittAA]
 gi|229812230|gb|EEP47921.1| transcriptional regulator CysB [Haemophilus influenzae 6P18H1]
          Length = 389

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 198/397 (49%), Positives = 269/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT  +G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKSGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  V FIAS+ GGM+IEE+A++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SALVDRASQKVVFIASSAGGMNIEEIAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GVQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKDRVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++A+S +N++TA +L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILAQSDVNILTAQNLQQAAELAVNAAKG 387


>gi|304414844|ref|ZP_07395762.1| succinyl-CoA synthetase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283113|gb|EFL91527.1| succinyl-CoA synthetase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 388

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 260/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +  +PV  G   S+   A +A   +PG  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFSENGLPVPIGYACSTAQEASAAAAKIPGDKWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++  S ++V +   + LG  L+T QT   G  V  V VE   +I +ELYL
Sbjct: 58  -------EGVKLVDSKEAVEAFATQWLGKNLVTYQTDAKGQPVKQVLVEAVTEIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR+S  V F+AST+GG++IE+VA++ P+ I KL +DPL G        L   L L 
Sbjct: 111 GVVVDRSSRRVMFMASTEGGVEIEKVAEETPELIHKLALDPLTGPQPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F + D+SL+EINPL+I K G L  LD K+S D NA +R   + 
Sbjct: 171 AKQVTQFSQIFMGLAKLFLESDLSLVEINPLVITKQGDLICLDGKLSVDGNASFRQKKLF 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A +  L+Y+ALDG+IGCMVNGAGLAMATMDI+KL+G  PANFLDVG
Sbjct: 231 EMRDPSQEDERENHATKWELNYVALDGHIGCMVNGAGLAMATMDIVKLHGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVNEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G + +AESGLN+I A  L+DAA K+V A + 
Sbjct: 351 GNNAPLGVQKLAESGLNIIAATSLNDAATKVVAAARS 387


>gi|91206043|ref|YP_538398.1| succinyl-CoA synthetase subunit beta [Rickettsia bellii RML369-C]
 gi|122425251|sp|Q1RH55|SUCC_RICBR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91069587|gb|ABE05309.1| Succinyl-CoA synthetase beta chain [Rickettsia bellii RML369-C]
          Length = 385

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 202/395 (51%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + GVV++   +  +AI  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGVVVTKTESINAAIDELNTKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA+  P+KI K  +DP  G+ +     +   L  +
Sbjct: 111 SVVFDRSASCITFIASTEGGVDIEEVAEKTPEKIIKFSVDPATGLQNFHAQGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++    YKAF + D + +EINPLI+ K G L  LD+K +FDDN L++H +I 
Sbjct: 171 DHQVKQMKEIVKATYKAFIETDAAQIEINPLIVNKEGNLLALDAKFTFDDNGLFKHPEIM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED  E  A    LSY+ +DG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ALRDQDEEDPLETRAADAGLSYVKMDGSIGCMVNGAGLAMATMDIIKLYGATPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  +++ SGL +I A DL DAA KIV A+
Sbjct: 351 GTNVEKGKEILSNSGLEIIPAHDLADAASKIVEAI 385


>gi|194098453|ref|YP_002001512.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998851|ref|ZP_04718775.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|240112777|ref|ZP_04727267.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae MS11]
 gi|254493637|ref|ZP_05106808.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268594694|ref|ZP_06128861.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268598845|ref|ZP_06133012.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae MS11]
 gi|226734965|sp|B4RL77|SUCC_NEIG2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|193933743|gb|ACF29567.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512677|gb|EEH62022.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268548083|gb|EEZ43501.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268582976|gb|EEZ47652.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae MS11]
 gi|317164139|gb|ADV07680.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 388

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|308272220|emb|CBX28826.1| Succinyl-CoA ligase [ADP-forming] subunit beta [uncultured
           Desulfobacterium sp.]
          Length = 387

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 198/395 (50%), Positives = 251/395 (63%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L  KY VPV  G V  +   A     +L     VVK+QIHA         
Sbjct: 1   MKIHEYQAKELFGKYGVPVPNGGVAFNSEEAVKVSDSLGCFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V S    ILG  L+T QTGP G  V  V VE G DI +ELYL
Sbjct: 52  -GGRGKGGGVKLSKSADEVRSTSESILGMNLVTNQTGPEGRLVKKVLVEQGLDIKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR++     +AS  GGMDIEEV++  P+KI K+ IDP+ G+           L L 
Sbjct: 111 GIIPDRSTAKFVIMASEAGGMDIEEVSEKTPEKIIKIFIDPIAGIYPYHCREAAYGLNLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +  +   +  +LYK F D D SLLEINPL+I    ++  LD+KI+FDDNAL+RH DI 
Sbjct: 171 PGSVKEFTGMLNSLYKLFTDYDCSLLEINPLVITAEDKVIALDAKITFDDNALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD+ EED  E+EA + NL+YI +DGN+G MVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 231 EYRDIDEEDPLEVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIKLAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V   FKII  D +VKG+ INIFGGI+RCDVL +G++ A K+  I +P+V+R+E
Sbjct: 291 GGASAEMVENGFKIILGDKNVKGVFINIFGGILRCDVLAEGVVKAAKKTGIAVPVVIRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+IG ++++ESGLN+ITAIDL DA  K+   V
Sbjct: 351 GTNVEIGRKILSESGLNLITAIDLQDAVGKVAAIV 385


>gi|317157723|ref|XP_003190872.1| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus oryzae
           RIB40]
 gi|317157725|ref|XP_001826545.2| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus oryzae
           RIB40]
          Length = 443

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  LL+ Y V + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEHLSAKLLKSYGVGMPKGEVAYSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRQSQSPVIVASSQGGMDIEAVAKETPEAIITTPIDIKVGVTDEIAGKIATELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCITEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVNEMGLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++L+ ESGL + +  DL +AA+K V   K V
Sbjct: 390 GTNMEQAHKLLNESGLKIFSIEDLQNAAEKSVQFSKVV 427


>gi|148826195|ref|YP_001290948.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae
           PittEE]
 gi|229846227|ref|ZP_04466339.1| transcriptional regulator CysB [Haemophilus influenzae 7P49H1]
 gi|189030245|sp|A5UCR4|SUCC_HAEIE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148716355|gb|ABQ98565.1| transcriptional regulator CysB [Haemophilus influenzae PittEE]
 gi|229811231|gb|EEP46948.1| transcriptional regulator CysB [Haemophilus influenzae 7P49H1]
          Length = 389

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGMDIEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KI+ DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKIAVDDNALFRHKDLS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILAESDVNILTAHSLQQAAELAVNAAKG 387


>gi|189205030|ref|XP_001938850.1| succinyl-CoA ligase beta-chain [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985949|gb|EDU51437.1| succinyl-CoA ligase beta-chain [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 443

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           IHEY++ ALL  Y + V KG V  S   AE   K + G   V+K+Q+ AGGRGKG F   
Sbjct: 35  IHEYRSAALLESYGIGVPKGGVAESGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN- 93

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               KGGVRV  S +       +++G  LITKQTG  G   N V++ D     RE YL++
Sbjct: 94  --GFKGGVRVVYSPREASILAEQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAI 151

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           L+DR S     +AS+QGGMDIE VAK++P+ I    +D   GVT E   ++   L    Q
Sbjct: 152 LMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPVDIHTGVTDEMARNIATDLGFSEQ 211

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
              D  D    LYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++   
Sbjct: 212 CIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFSW 271

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           RD+++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVGGG
Sbjct: 272 RDLTQEDPEEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGTPANFLDVGGG 331

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + +  AF +ITSD  V  I +NIFGGI+RCD + KG++  V+E+ +  P++ RL+G 
Sbjct: 332 ATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQGT 391

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           N++   +L+ +SGL + +  DL  AA+K V   K V
Sbjct: 392 NMEAAQKLLNDSGLKIFSIDDLQAAAEKSVQFSKVV 427


>gi|327356071|gb|EGE84928.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis ATCC
           18188]
          Length = 444

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 244/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAGQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P+ I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIESVAKETPEAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + LI ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSKVV 428


>gi|121634760|ref|YP_975005.1| succinyl-CoA synthetase subunit beta [Neisseria meningitidis FAM18]
 gi|189081758|sp|A1KTM6|SUCC_NEIMF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|120866466|emb|CAM10212.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           meningitidis FAM18]
          Length = 388

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|167520005|ref|XP_001744342.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777428|gb|EDQ91045.1| predicted protein [Monosiga brevicollis MX1]
          Length = 397

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 183/398 (45%), Positives = 251/398 (63%), Gaps = 5/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L+++Y++ V K     +   A    K L  P  V+K+Q+HAGGRGKG F 
Sbjct: 2   LNLHEYQSKGLMQEYDIEVQKFFATDNAENALQLAKELNVPEIVLKAQVHAGGRGKGTF- 60

Query: 61  ELPADSKGGVRVES--SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
              +  K GV +      + V   + +++G  L+TKQT P G  VN V V +  DI RE 
Sbjct: 61  --SSGLKSGVHLIPGDQPEKVKDLVEQMIGYNLVTKQTPPDGVTVNKVMVAEALDIARET 118

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR SG    + S +GG+DIEEVA+  P+ IFK  +D   GV    +  +   L 
Sbjct: 119 YFAILMDRESGGPVLVGSPEGGVDIEEVAERSPELIFKEPVDINEGVQDAQLERMATNLG 178

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             G            LY+ F   D S +EINP     +GR+   D+KI+FDDNA +R   
Sbjct: 179 FTGAKHEKAKKEMKQLYELFMGVDASQVEINPFAETPDGRVLCFDAKINFDDNAAFRQQK 238

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD +EED RE+EA + NL+YI +DGNI C+VNGAGLAMATMDIIK +GG PANFLD
Sbjct: 239 IFAMRDTAEEDPREVEASKFNLNYIGMDGNIACLVNGAGLAMATMDIIKHHGGEPANFLD 298

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGG  +  VA AF+I+TSD  V+ IL+NIFGGI+ C  +  GI+ A +EV++ +PLV+R
Sbjct: 299 CGGGVTEQMVANAFRILTSDQQVEAILVNIFGGIVNCATIASGIVFACREVELQLPLVVR 358

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NV+ G +++A+S L +I A DLD+AAQK V AV+
Sbjct: 359 LEGTNVEGGKQILADSKLPIIFAADLDEAAQKAVAAVR 396


>gi|71003698|ref|XP_756515.1| hypothetical protein UM00368.1 [Ustilago maydis 521]
 gi|46095953|gb|EAK81186.1| hypothetical protein UM00368.1 [Ustilago maydis 521]
          Length = 460

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 162/397 (40%), Positives = 239/397 (60%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  +L KY +   K +   +   A  A ++  G   V+K+Q+ AGGRGKG F 
Sbjct: 63  LSIHEHLSMDILNKYGIATPKYIAAKTPEEAYKAAQSFGGKEIVIKAQVLAGGRGKGHFD 122

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +  + +       +++G+ LITKQTG  G   N V + +      E Y+
Sbjct: 123 ---SGLKGGVHLIKTPEEARDLAAKMIGNHLITKQTGAGGRLCNAVMIAEARPPHHEYYV 179

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR + +   IAS QGGM IEEVA + P  I    ID   G++++D   +   L   
Sbjct: 180 AVLNDRATQLPVLIASNQGGMSIEEVAAENPDAIITTPIDFEKGLSNQDALGIAKKLGFT 239

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G +      + F  LYK F +KD + +EINPL   K+G +  +D+K+ FD+NA +R  DI
Sbjct: 240 GAKQEQQAAETFQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQADI 299

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD ++ED  E++A ++ L++I LDGNIGC+VNGAGLAMATMD++KL GG PANFLDV
Sbjct: 300 FELRDTTQEDPDEVDAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDV 359

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A    V  AF+++ +   VKGI +NIFGGI+ C  + +GI+ A +E+ ++IPLV+RL
Sbjct: 360 GGTASAASVKKAFELLLNSKEVKGIFVNIFGGIVSCKKIAEGIIQATQELDMSIPLVVRL 419

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +G +      LI  S L +     LD+AA K V + +
Sbjct: 420 QGTHEKEAKELIKNSNLKIFAFDGLDEAAAKAVESAQ 456


>gi|51473622|ref|YP_067379.1| succinyl-CoA synthetase subunit beta [Rickettsia typhi str.
           Wilmington]
 gi|77417470|sp|Q68WU5|SUCC_RICTY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|51459934|gb|AAU03897.1| Succinate thiokinase [Rickettsia typhi str. Wilmington]
          Length = 386

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 264/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++       AI  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINEAIDKLNTKVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNHLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYGLGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLII     L  LD+KI+FDDN L++H +I 
Sbjct: 171 DSQAKQMKEIVKSVYNAFIETDATQIEINPLIINSYKNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A +++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAARDIGITVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ S L +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSNLKIIPAHDLADAANKIVEAIR 386


>gi|304321621|ref|YP_003855264.1| SucC, succinyl-CoA synthetase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300523|gb|ADM10122.1| SucC, succinyl-CoA synthetase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 396

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 252/395 (63%), Positives = 304/395 (76%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK LL+ Y  PVA G ++     A +A + LPGPLYVVK+QIHAGGRGKG FK
Sbjct: 1   MNIHEYQAKDLLKSYGAPVAAGAIVLDADDAATAAQGLPGPLYVVKAQIHAGGRGKGHFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E  A  KGGVR+  ++    + ++ +LG TL+TKQTG  G  V  VY+EDGADI RELYL
Sbjct: 61  EAEAGEKGGVRLAKTVDDAAAQVKAMLGHTLVTKQTGDEGKVVGRVYIEDGADIDRELYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +G VAFIAST+GGMDIEEVA   P+KI  L IDP  G+T+ED   L + L+L+
Sbjct: 121 SLLVDRGTGKVAFIASTEGGMDIEEVAASTPEKILTLPIDPA-GMTAEDAIKLVEALKLE 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G AR DG  L P LY AF +KDMS+LEINPLI+M +G LRVLD+K+ FD NA +RH DI+
Sbjct: 180 GAAREDGLKLMPILYTAFVEKDMSMLEINPLIVMTDGHLRVLDAKVGFDPNASFRHPDIE 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD SEED  E  A + +LSYI LDGNIGCMVNGAGLAMATMDI+K YG  PANFLDVG
Sbjct: 240 QLRDESEEDPLERRASEFDLSYIKLDGNIGCMVNGAGLAMATMDIVKHYGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFKIITSD  V+GIL+NIFGGIM+CDV+ +G+++AVKE  + +PLV+RLE
Sbjct: 300 GGATKEKVTEAFKIITSDPGVEGILVNIFGGIMKCDVIAEGVIAAVKETGLKVPLVVRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G ++I ESGL+VI A DLDDAA+KIV AV
Sbjct: 360 GTNVDAGKKIINESGLDVIAADDLDDAAKKIVAAV 394


>gi|309973340|gb|ADO96541.1| Succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           R2846]
          Length = 389

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMNIEEVAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SL+E+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|148666929|gb|EDK99345.1| mCG127318 [Mus musculus]
          Length = 466

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 171/393 (43%), Positives = 237/393 (60%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV     ++  SGL + +A+DL+DAA+K V 
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLEDAAKKAVA 428


>gi|300722388|ref|YP_003711674.1| succinyl-CoA synthetase subunit beta [Xenorhabdus nematophila ATCC
           19061]
 gi|297628891|emb|CBJ89474.1| succinyl-CoA synthetase, beta subunit [Xenorhabdus nematophila ATCC
           19061]
          Length = 388

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEQWLGKRLVTYQTDAQGQPVHQILVEGATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+EINPL+I     L  LD K+S D NA++R  +++
Sbjct: 171 GKQVGQFTKIFLGLANLFLERDLTLVEINPLVITTQDDLICLDGKLSADGNAMFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAAASLTD 376


>gi|330944046|ref|XP_003306299.1| hypothetical protein PTT_19429 [Pyrenophora teres f. teres 0-1]
 gi|311316234|gb|EFQ85615.1| hypothetical protein PTT_19429 [Pyrenophora teres f. teres 0-1]
          Length = 443

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           IHEY++ ALL  Y + V KG V  S   AE   K + G   V+K+Q+ AGGRGKG F   
Sbjct: 35  IHEYRSAALLESYGIGVPKGGVAESGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN- 93

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               KGGVRV  S +       +++G  LITKQTG  G   N V++ D     RE YL++
Sbjct: 94  --GFKGGVRVVYSPREASILAEQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAI 151

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           L+DR S     +AS+QGGMDIE VAK++P+ I    +D   GVT E   ++   L    Q
Sbjct: 152 LMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPVDIHTGVTDEMARNIATDLGFSEQ 211

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
              D  D    LYK F +KD + +EINPL    + ++  +D+K++FDDNA +R  ++   
Sbjct: 212 CIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFSW 271

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           RD+++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVGGG
Sbjct: 272 RDLTQEDPEEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGTPANFLDVGGG 331

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + +  AF +ITSD  V  I +NIFGGI+RCD + KG++  V+E+ +  P++ RL+G 
Sbjct: 332 ATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQGT 391

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           N++   +L+ +SGL + +  DL  AA+K V   K V
Sbjct: 392 NMEAAQKLLNDSGLKIFSIDDLQAAAEKSVQFSKVV 427


>gi|154273072|ref|XP_001537388.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Ajellomyces capsulatus NAm1]
 gi|150415900|gb|EDN11244.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Ajellomyces capsulatus NAm1]
          Length = 444

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE+  K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKTYGVGVPKGEVARTAEEAEAVAKQIDAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P  I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIETVAKETPDAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  +    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCLEEAKNTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDPDEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + AAF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRAAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + LI ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELINESGLKIFSMEDLQNAAEKSVQFSKVV 428


>gi|85711261|ref|ZP_01042320.1| succinyl-CoA synthetase subunit beta [Idiomarina baltica OS145]
 gi|85694762|gb|EAQ32701.1| succinyl-CoA synthetase subunit beta [Idiomarina baltica OS145]
          Length = 388

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 187/384 (48%), Positives = 252/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L +++ +PV++G    +   A  A K + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEFGLPVSEGFACDTADEAVEAAKRIGGDTWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V +   + LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKSTDEVRAFAEQWLGKNLVTFQTDENGQPVAKILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+KI K+ IDP +G        L   L L 
Sbjct: 111 GAVVDRGSRKIVFMASTEGGVEIEKVAEETPEKILKVEIDPTVGAQPFQGRELGFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F   D++LLEINPL+I   G L  LD+K+  D NALYR   I+
Sbjct: 171 ADQVKQFTKIFLGLAKMFEQYDLALLEINPLVITDEGNLHCLDAKVGIDSNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S++D+RE EA +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL GG PANFLDVG
Sbjct: 231 EMHDPSQDDAREAEAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SDSSVK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDSSVKAVLVNIFGGIVRCDMIAEGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N ++G + + ESGLN+I A  L
Sbjct: 351 GNNAELGTQKLNESGLNIIAAESL 374


>gi|164669|gb|AAA31120.1| succinyl-CoA synthetase beta-subunit [Sus scrofa]
          Length = 417

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 170/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 23  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 82  --SSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 140 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 200 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 260 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 320 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 380 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 414


>gi|254804841|ref|YP_003083062.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha14]
 gi|254668383|emb|CBA05491.1| succinyl-CoA synthetase, beta subunit [Neisseria meningitidis
           alpha14]
 gi|325204030|gb|ADY99483.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis
           M01-240355]
          Length = 388

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SV+G+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|124265265|ref|YP_001019269.1| succinyl-CoA synthetase subunit beta [Methylibium petroleiphilum
           PM1]
 gi|124258040|gb|ABM93034.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylibium
           petroleiphilum PM1]
          Length = 386

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 186/384 (48%), Positives = 250/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR++ VPV +G    +   A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRQFGVPVPRGYPAFTGQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG  L T QTGP G +V  +Y+E+GADI +E Y+
Sbjct: 52  -GGRGKGGGVKLGKSLDEVKALSGQILGMQLKTHQTGPEGQKVRRLYIEEGADIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VA IAS++GGMDIEEVA   P+KI   +IDPL G+       +   + L 
Sbjct: 111 SLVTDRATQKVALIASSEGGMDIEEVAHSTPEKIITEVIDPLAGLGDAQAKKIAAAIGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      L  NLY+ + + D SL+EINPL     G L  LD+K +FD NAL+RH +I 
Sbjct: 171 EGSHAQAVTLLQNLYRCYMETDASLVEINPLNCDSKGNLIALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VK IL+NIFGGIMRCD +  G+++A + V + +PLV+R++
Sbjct: 291 GGATAEKVTEAFKIMLKNPEVKAILVNIFGGIMRCDTIADGVVTASRAVGLKVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N D+G +++A+SGL +I A  +
Sbjct: 351 GTNEDLGKKILADSGLPIIAADTM 374


>gi|260914171|ref|ZP_05920644.1| succinyl-CoA ligase subunit beta [Pasteurella dagmatis ATCC 43325]
 gi|260631804|gb|EEX49982.1| succinyl-CoA ligase subunit beta [Pasteurella dagmatis ATCC 43325]
          Length = 388

 Score =  454 bits (1169), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y +PV KG    + + A  AIK L G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQIFAEYQLPVGKGYACKNANEAADAIKKLNGDVWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   + LG  L+T QT   G  VN +YVE+G+ I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFADQWLGKRLVTFQTDANGQPVNTIYVEEGSSIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+ ST+GG++IEEVA+  P  + K+ IDPL G        L   L L+
Sbjct: 111 GAVLDRASQRVVFMVSTEGGVNIEEVAEKTPHLLHKMAIDPLTGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  + K F +KD++LLE+NPL++ K G L  LD+KI  D NALYR   ++
Sbjct: 171 GDQIKQFAHIFVQIAKMFVEKDLALLEVNPLVVTKEGNLLCLDAKIVVDSNALYRQPVLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A+ H L+Y+AL+GNIGCMVNGAGLAM TMDIIKL+GG PANFLDVG
Sbjct: 231 AMQDPSQEDPREALAESHQLNYVALEGNIGCMVNGAGLAMGTMDIIKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSAVKAVLVNIFGGIVRCDLIAEGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SG+N+I A  L DA+ + V A +G
Sbjct: 351 GNNAPLGREILANSGVNIIAANTLTDASIQAVKAAEG 387


>gi|124515902|gb|EAY57411.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum rubarum]
          Length = 396

 Score =  454 bits (1169), Expect = e-126,   Method: Composition-based stats.
 Identities = 193/404 (47%), Positives = 269/404 (66%), Gaps = 17/404 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-------GPLYVVKSQIHAGG 53
           MNIHEYQAK L +++ +PV  GV++ SV  A   +   P         ++ VK+QIHAGG
Sbjct: 1   MNIHEYQAKELFKEFGIPVPNGVLVESVEEARKVVNESPLFRGESRPAVWAVKAQIHAGG 60

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           GGV++    + +   + +ILG TL+T QTGP G +V  V++E+G++
Sbjct: 61  RGKA----------GGVKLARKSEEIPDLVSQILGKTLVTHQTGPEGKKVLKVWIEEGSN 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           I RE YL ++VDRT+  +  IAST+GGM+IEEVA+ +P+KIF L +DPL G +      +
Sbjct: 111 IAREFYLGVVVDRTTRRMTLIASTEGGMEIEEVAEKHPEKIFHLALDPLEGYSPYIGRRV 170

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L    +    ++  +L   F  +D S++EINPL++ +  RL  LD+K+ FDDNA+
Sbjct: 171 SQFLGLPFSTQTQMVNIVRDLLDFFQRRDASMVEINPLVLTREDRLIALDAKVGFDDNAV 230

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
            R   I+ LRD+SEE+  EIEA ++NL+Y+ LDGNI CMVNGAGLAMATMD+I L GG+P
Sbjct: 231 GRQPAIRGLRDLSEENPLEIEASKYNLNYVKLDGNIACMVNGAGLAMATMDVIALAGGSP 290

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA ++ V  AF+II  D  VKGI +NIFGGI+RC+ +  GI++A ++VKI I
Sbjct: 291 ANFLDVGGGASKETVEQAFRIILGDPHVKGIFVNIFGGIVRCERIAGGIIAAAQDVKITI 350

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           PLV+RL+G N   G  ++  SGL +  A +L + A+KIV AVKG
Sbjct: 351 PLVVRLQGTNAKEGREMLRSSGLAIQVAEELYEGAEKIVLAVKG 394


>gi|319897338|ref|YP_004135534.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           F3031]
 gi|317432843|emb|CBY81208.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           F3031]
          Length = 389

 Score =  454 bits (1169), Expect = e-126,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAESDVNILTAQSLQQAAELAVNAAKG 387


>gi|330818197|ref|YP_004361902.1| succinyl-CoA synthetase subunit beta [Burkholderia gladioli BSR3]
 gi|327370590|gb|AEA61946.1| succinyl-CoA synthetase subunit beta [Burkholderia gladioli BSR3]
          Length = 388

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 183/386 (47%), Positives = 259/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVAVPRGKPAFSVEDAVKVAEELGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S++ V     +ILG  L+T QTGP G +VN + VE+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIEQVREYASQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR S  +  + S++GGMDIEEVA+ +P+ I +++++P  G+       L   + + 
Sbjct: 111 SLVVDRVSQKIVLMGSSEGGMDIEEVAEKHPELIHQVIVEPSTGLLDAQADDLAAKIGVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   LYKAF + D SL EINPL +  +G++  LD+K +FD NAL+RH +I 
Sbjct: 171 AASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVTALDAKFNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 AYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  +K IL+NIFGGIMRCDV+ +G+++  K V + +PLV+R++
Sbjct: 291 GGATTEKVTEAFKLMLKNPDLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLGVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G +++AESGL +I+A  +++
Sbjct: 351 GTNEDLGKKMLAESGLPIISADSMEE 376


>gi|145637050|ref|ZP_01792713.1| transcriptional regulator CysB [Haemophilus influenzae PittHH]
 gi|145269704|gb|EDK09644.1| transcriptional regulator CysB [Haemophilus influenzae PittHH]
          Length = 389

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGGKWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMNIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+F  L + F +KD+SL+E+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 DAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|156546290|ref|XP_001605984.1| PREDICTED: similar to ENSANGP00000017707 [Nasonia vitripennis]
          Length = 450

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 180/395 (45%), Positives = 242/395 (61%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + ++L +  +P  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 39  LNVHEHISYSILNEAGIPTPKFGVAKTPDEAAKLATDLNTKDIVLKAQVLAGGRGKGHFK 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                +  GV++  + +       ++LG  L+TKQTG  G   N V V       +E YL
Sbjct: 99  ---GGNVSGVKMCETPEEAKQLASQMLGKLLVTKQTGEAGRICNAVMVTQRMFPRKEYYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   PQ I    ID   G+T +    +   L L+
Sbjct: 156 AVMMERAFGGPVIIASSQGGVNIEEVAATNPQAIMYEPIDINKGITKDQADRIAVKLGLE 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     +  N+Y  F  KD  LLE+NPL    NG    LD K  FDDNA +R  D+ 
Sbjct: 216 -NVKEYISKMIMNMYSLFVKKDALLLEVNPLAEDINGEYFALDCKCRFDDNAEFRQKDLF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA +  L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKFELNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 335 GGATASAVKEAFKIITSDSKVHALLVNIFGGIMRCDVIAEGIIAATKELDLKIPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA +GL ++   DLD+AA+  V   
Sbjct: 395 GTNVDEAKALIANAGLKIVPVDDLDEAARIAVKLS 429


>gi|300024657|ref|YP_003757268.1| succinyl-CoA synthetase subunit beta [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526478|gb|ADJ24947.1| succinyl-CoA synthetase, beta subunit [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 387

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 182/396 (45%), Positives = 250/396 (63%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL K+ VP+A+G +  S   A      L G + VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLAKFGVPIARGGLAYSPEQATYRASELGGTV-VVKAQIHSGARGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + K +      +LG  L+T QTG  G  V+ +Y+E+  +I RE+YL
Sbjct: 57  -------GGVKVCKTEKEIEDAAEFMLGRKLVTHQTGSAGKLVSRLYIEEATNIDREIYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS  GGMDIEE++   P  I ++ +DP +G+       L   L + 
Sbjct: 110 GFVMDRASERIVVVASAAGGMDIEEISASQPDTIIRVAVDPAVGMQQFQARELAFGLGVD 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D  ++EINPL+I K  ++  LD+K+SFDDNAL+R   I 
Sbjct: 170 PEIVNKLVPAIMGCYRAFRDLDAMMVEINPLVITKEKQVVALDAKMSFDDNALFRRPHIA 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDG+IGC+VNGAGLAMAT+D+IKL GG PANFLD+G
Sbjct: 230 ELRDKSQEDPRETYASDRGLSYVGLDGDIGCIVNGAGLAMATLDMIKLAGGEPANFLDIG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  +FK +  D +VK IL+N+F GI RCD + KG++ AVKE+ I +P+V+RL 
Sbjct: 290 GGASPERVTKSFKAVLRDKNVKAILVNVFAGINRCDWVAKGVVDAVKELDIKLPIVVRLA 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G ++I  SGL VI+A  L DAA++ V A K
Sbjct: 350 GTNVEEGRKIIDNSGLTVISAETLADAAKQAVEAAK 385


>gi|325128083|gb|EGC50978.1| succinate-CoA ligase, beta subunit [Neisseria meningitidis N1568]
          Length = 388

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V +    +  ELY
Sbjct: 58  -------GGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDIYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +++P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVDVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|193213142|ref|YP_001999095.1| succinyl-CoA synthetase subunit beta [Chlorobaculum parvum NCIB
           8327]
 gi|226734934|sp|B3QPP2|SUCC_CHLP8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|193086619|gb|ACF11895.1| succinyl-CoA synthetase, beta subunit [Chlorobaculum parvum NCIB
           8327]
          Length = 392

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 185/399 (46%), Positives = 261/399 (65%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA----IKTLPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+++ V V KG+V  S   A+ A     +    P+ VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKGILKQFGVAVPKGIVAFSAEEAKQAAAELFEEQSSPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S + V    +++LG+TL+T QTGP G  V  + +E+G +I +
Sbjct: 61  A----------GGVKLAKSPEEVYEIAQKMLGTTLVTHQTGPEGKEVRRLLIEEGMNIDK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR +     + ST+GGM+IE+VA++ P+K+ K+ ++P  G+           
Sbjct: 111 EFYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPKYGLQGFQAREAALF 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L +QG+   +G      LYKA+   D SL EINPL++ K GR+  LD+KI+FDDNA+YRH
Sbjct: 171 LGMQGEQFRNGVKFIDALYKAYTTIDASLAEINPLVVTKEGRVLALDAKINFDDNAMYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D  ELRD++EED  E EA + NL+Y+ LDGN+GCMVNGAGLAM TMD+I+L GG PANF
Sbjct: 231 PDFHELRDITEEDPLEYEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLAGGKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA    V   FKII  D +VK IL+N+FGGI+RCD +  G++ A K + + +P++
Sbjct: 291 LDVGGGASPKTVEEGFKIILGDKNVKAILVNVFGGIVRCDRVAGGVIEAAKNIGLTVPVI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N     +++ ESGL++I A  L DAA+K+  A+
Sbjct: 351 VRLEGTNAKEAQKMLDESGLSLIAANGLRDAAEKVQKAL 389


>gi|21264506|sp|P53590|SUCB2_PIG RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
          Length = 433

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 170/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  --SSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 156 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 396 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 430


>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]
          Length = 1647

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 176/397 (44%), Positives = 249/397 (62%), Gaps = 4/397 (1%)

Query: 1    MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            +N+ EYQ+K LLR   V V    ++  +    SA++ L    YV+K+QI AGGRGKG F 
Sbjct: 1253 LNLLEYQSKELLRDCGVSVQNFAIVDDLTKTNSALEKLHEGEYVIKAQILAGGRGKGWFD 1312

Query: 61   ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  KGGV +     +V + ++ +LG  LITKQT   G  V  + + +  DI RE Y+
Sbjct: 1313 N---GFKGGVHLTRDRNAVSNYVKNMLGHRLITKQTSKDGIPVQKIMIAESVDIARETYV 1369

Query: 121  SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +L+DR       IAS  GGMDIE VA+  P++I  + +D   G+       +   L   
Sbjct: 1370 CILMDRAHNGPVLIASPAGGMDIETVAEKNPEQIKTVPLDIYYGINDAIAKDVSIFLGFT 1429

Query: 181  GQAR-IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                         NL+K F D D   +EINPL+  K+ ++  +D+KI+FDDNA +R  D+
Sbjct: 1430 DPDILDKAIYELKNLWKLFVDIDALQVEINPLVETKDKQVIAVDAKIAFDDNAQFRQQDL 1489

Query: 240  QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              L DV+E+D RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLDV
Sbjct: 1490 FALEDVTEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDV 1549

Query: 300  GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
            GG   +D+V  AF+I++ D  VK I +N+FGGI+ C  + KGI++A + + + IPLV+RL
Sbjct: 1550 GGNVKEDQVFQAFRILSEDPKVKAIFVNVFGGIVNCATIAKGIIAASRNLGLQIPLVVRL 1609

Query: 360  EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            EG NV    +++AESGL ++TA +LD+AA+K V +VK
Sbjct: 1610 EGTNVTEAKKVLAESGLPILTANNLDEAAKKAVISVK 1646


>gi|320581180|gb|EFW95401.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Pichia
           angusta DL-1]
          Length = 425

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR Y VPV KG   ++   A    K+L     V+K+Q   GGRGKG F 
Sbjct: 33  LSIHEYRSAQLLRSYGVPVPKGDAATTPEGAYEIAKSLGTKELVIKAQALTGGRGKGHFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GVR+  + +       +++G  LITKQTG  G  V  VYV +     RE YL
Sbjct: 93  N---GLKSGVRLIETPEEAKDLASKMIGHKLITKQTGAAGKEVTAVYVVERKYAKREAYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     +AS++GG+DIE VAK+ P  I K  +D   G++ E    +   L+  
Sbjct: 150 SIIMDRKNQSTLVVASSEGGVDIEGVAKENPDAIKKYPVDYNQGISDELAKQIASGLKFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A     +    LY+ F DKD + +EINPL    +  +  +D+K  FDDNA +R  ++ 
Sbjct: 210 PEAVPKAAETIKKLYQIFKDKDATQIEINPLTETVDHEVMCMDAKFGFDDNAAFRQEEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED  E+ A +  L++I LDGNIGC+VNGAGLAMATMD+++LYGG+PANFLDVG
Sbjct: 270 SWRDLTQEDPDEVHASKFGLNFIKLDGNIGCLVNGAGLAMATMDVVQLYGGSPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AFK+I S+  VK I +NIFGGI+RCD + +G+++A K + + IP+V+RL+
Sbjct: 330 GTATPETIEEAFKLIISEKGVKAIFVNIFGGIVRCDYVAEGLIAATKNLSLTIPVVVRLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+DI  +LI+ESGL +    DLD+AA+K+V   K
Sbjct: 390 GTNLDIAKKLISESGLKLYLFEDLDEAAEKVVELGK 425


>gi|240080859|ref|ZP_04725402.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA19]
 gi|240115528|ref|ZP_04729590.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID18]
 gi|240117823|ref|ZP_04731885.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID1]
 gi|260440661|ref|ZP_05794477.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|268596976|ref|ZP_06131143.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268601203|ref|ZP_06135370.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268603523|ref|ZP_06137690.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID1]
 gi|291043969|ref|ZP_06569685.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|268550764|gb|EEZ45783.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268585334|gb|EEZ50010.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268587654|gb|EEZ52330.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID1]
 gi|291012432|gb|EFE04421.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI2]
          Length = 388

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 269/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V +S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVNSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+G IGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGKIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|145248642|ref|XP_001400660.1| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus niger
           CBS 513.88]
 gi|134081327|emb|CAK41830.1| unnamed protein product [Aspergillus niger]
          Length = 443

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 250/398 (62%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y + + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEYLSANLLKSYGIGMPKGEVARSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGTFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFASQMIGQKLITKQTGAAGRLCNSVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID  +GVT      +   L   
Sbjct: 150 AVLMDRASQSPVIVASSQGGMDIEAVAKENPEAIITTPIDIKVGVTDAIAHKIVTELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 330 GGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVARLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI ESGL + +  DL  AA+K V   K V
Sbjct: 390 GTNMEQAHKLINESGLKIFSIEDLQSAAEKSVQFSKVV 427


>gi|210075643|ref|XP_502415.2| YALI0D04741p [Yarrowia lipolytica]
 gi|199425760|emb|CAG80603.2| YALI0D04741p [Yarrowia lipolytica]
          Length = 435

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 246/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE+++  +L+ Y + V KG   ++   AE   K L     V+K+Q   GGRGKG F 
Sbjct: 25  LSLHEFRSAQILQNYGIDVPKGGAATTPQQAEDIAKKLGCEDMVIKAQALTGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++ SS         ++L   + TKQTGP G  V  VYV +   + RE Y+
Sbjct: 85  N---GLKGGVKLISSPTEAKMYAEQMLNHKIFTKQTGPQGKPVTAVYVVEREFVRREAYV 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VA + P  I    +D   GVT      +   L   
Sbjct: 142 AILMDRATQKPIIVASSQGGMDIEGVAAENPDAIHTFPVDIHTGVTDTQAIEVAKALGFS 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A  +  D    LYK F DKD + +EINPL    + R+  +D+K+ FDDNA +R  ++ 
Sbjct: 202 SKATQEAADDIKKLYKVFTDKDATQIEINPLSETTDHRVVAMDAKLGFDDNASFRQEEVW 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED  EIEA +H L++I LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 262 SWRDLTQEDPEEIEAAKHGLNFIKLDGNIGCLVNGAGLAMATMDIIKLYGGEPANFLDCG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D +  AF++ITS+  V  I +NIFGGI+RCD + KG+++  + + +NIP+V RL+
Sbjct: 322 GGATADAIKKAFELITSEPGVTAIFVNIFGGIVRCDNIAKGLIAVAQNMNLNIPIVARLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+    +LI++SGL + +  DLD+AAQK+    K V
Sbjct: 382 GTNLAEAQKLISDSGLKIFSFGDLDEAAQKVCQLSKVV 419


>gi|307823358|ref|ZP_07653587.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
 gi|307735343|gb|EFO06191.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
          Length = 397

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 177/394 (44%), Positives = 252/394 (63%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  Y V +A+G +  S   A    + + G ++ VK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILSGYGVKIAEGGMAYSPEEAVQRARDIGGHIWAVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V +    +LG  L+T QTGP G     +YVE G DI++E+Y 
Sbjct: 58  -------GGIKICKTHDEVEAAAEALLGKRLVTHQTGPVGKVCGRLYVEAGTDIVKEMYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR+S  +  + S QGGM+IEE+A++ P  I K+ I+P +G+       +   L L+
Sbjct: 111 CFLVDRSSERIVMVGSAQGGMEIEELAENNPDAITKIYIEPAVGLQDYQAREMAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+A  + D  +LEINPL++ ++  L  LD+K+ FDDNAL+R   I 
Sbjct: 171 PELLSHAVKTIRGCYRALRELDAGMLEINPLVVTRSNELVALDAKMGFDDNALFRQQKIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ED RE+ A    LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDKTQEDPREMAAADRGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D  VK +L+NIF GI RCD + +G++ AVK++ + IPL++RL 
Sbjct: 291 GGASAERTEKAFRLVLADKGVKAMLVNIFAGINRCDWIAEGVVEAVKKIDMKIPLIVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G R+IAESGL +ITA  L +AA+K V A
Sbjct: 351 GTNVEEGRRIIAESGLPIITAETLAEAAEKAVQA 384


>gi|127512586|ref|YP_001093783.1| succinyl-CoA synthetase subunit beta [Shewanella loihica PV-4]
 gi|189081803|sp|A3QDH6|SUCC_SHELP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126637881|gb|ABO23524.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Shewanella
           loihica PV-4]
          Length = 388

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 248/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLATMFTDHDFALLEINPLVITTEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDANVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G  ++A SGL++I A  L D
Sbjct: 351 GTNADLGREVLANSGLDIIAAESLTD 376


>gi|15225353|ref|NP_179632.1| succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial,
           putative / succinyl-CoA synthetase, beta chain, putative
           / SCS-beta, putative [Arabidopsis thaliana]
 gi|21264030|sp|O82662|SUCB_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|3660469|emb|CAA05024.1| succinyl-CoA-ligase beta subunit [Arabidopsis thaliana]
 gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|330251911|gb|AEC07005.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
           thaliana]
          Length = 421

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV  SS+   + AI+ +       VVKSQI AGGRG G 
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGT 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +            ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 87  FK---SGLKGGVHIVK-RDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+++DR S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 143 YFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  +
Sbjct: 203 PKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 VFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+R
Sbjct: 323 VGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 383 LEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKAL 419


>gi|59801309|ref|YP_208021.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA
           1090]
 gi|240014234|ref|ZP_04721147.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae DGI18]
 gi|240016670|ref|ZP_04723210.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae FA6140]
 gi|240121797|ref|ZP_04734759.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           PID24-1]
 gi|240125626|ref|ZP_04738512.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-92-679]
 gi|240128082|ref|ZP_04740743.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268684215|ref|ZP_06151077.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686471|ref|ZP_06153333.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-93-1035]
 gi|293399169|ref|ZP_06643334.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           gonorrhoeae F62]
 gi|75355993|sp|Q5F878|SUCC_NEIG1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|59718204|gb|AAW89609.1| putative succinyl-CoA synthetase beta subunit [Neisseria
           gonorrhoeae FA 1090]
 gi|268624499|gb|EEZ56899.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-92-679]
 gi|268626755|gb|EEZ59155.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291610583|gb|EFF39693.1| succinyl-CoA ligase [ADP-forming] subunit beta [Neisseria
           gonorrhoeae F62]
          Length = 388

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 268/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+G IGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGKIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|90109555|pdb|2FP4|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase In Complex With Gtp
 gi|90109573|pdb|2FPG|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase In Complex With Gdp
 gi|90109575|pdb|2FPI|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase From Polyethylene Glycol
 gi|90109583|pdb|2FPP|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
           Synthetase From Polyethylene Glycol With Chloride Ions
          Length = 395

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 171/395 (43%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 1   MNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 60  --SSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 118 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 178 GPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 238 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 298 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 358 GTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 392


>gi|32476524|ref|NP_869518.1| succinyl-CoA synthetase (beta subunit) [Rhodopirellula baltica SH
           1]
 gi|32447070|emb|CAD76879.1| succinyl-CoA synthetase (beta subunit) [Rhodopirellula baltica SH
           1]
          Length = 413

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 191/394 (48%), Positives = 262/394 (66%), Gaps = 2/394 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L R   VPV  G ++++   A +A   L G + VVK+QIHAGGRGKG   
Sbjct: 20  MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   + GV +  S +   +    +LG  L+T QTGP G  V+ V+VE G DI RELYL
Sbjct: 80  DNP--DQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYL 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       + ST+GG++IE VA++ P+ IFK   DP +G+    V  LC  L ++
Sbjct: 138 GIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIE 197

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A          + + F D D  + EINPL+I  +G +  LD+KI FD+NA++RH D++
Sbjct: 198 GAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITGDGEMVALDAKIIFDENAMFRHKDLE 257

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEE+  E+ AK+  LSY+ LDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 258 ELRDLSEEEESELRAKKAGLSYVKLDGNIACLVNGAGLAMSTMDIIKYHGGEPANFLDVG 317

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  +V  AF+I+ SD + KG+L+NIFGGI RC  +   +++A KEV  N+PLV+RLE
Sbjct: 318 GGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCTTIAGALITASKEVGFNVPLVVRLE 377

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G  V+ G +++AES +++I A+DL DAA+KIV A
Sbjct: 378 GTEVEEGRKMLAESDVDIINAMDLTDAAKKIVAA 411


>gi|157825718|ref|YP_001493438.1| succinyl-CoA synthetase subunit beta [Rickettsia akari str.
           Hartford]
 gi|189081783|sp|A8GNF5|SUCC_RICAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157799676|gb|ABV74930.1| succinyl-CoA synthetase subunit beta [Rickettsia akari str.
           Hartford]
          Length = 386

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTEVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QT P G +VNC+Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVVKSKEEAKKVAHDMFGINLVTHQTEPQGQKVNCLYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIEEVA   P KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEEVAAKTPAKIIKFSVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFVETDAAQIEINPLIVQTDGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ + GNIGCMVNGAGLAMATMDIIKLYG +PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMGGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ SGL++I A DL DAA KIV A++
Sbjct: 351 GTNVEKGEEILSNSGLDIIPAHDLADAANKIVAAIR 386


>gi|237750568|ref|ZP_04581048.1| succinyl-CoA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373658|gb|EEO24049.1| succinyl-CoA synthetase [Helicobacter bilis ATCC 43879]
          Length = 387

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 262/397 (65%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G V ++ + A++    L G ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKQVLRKYGVATPRGRVANNGYEAKAIANELGGSVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +    +LG TL+T QTGP+G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVKLAKSLDEVATLTDSMLGMTLVTHQTGPSGKKVGRVYIEEGLDIKKEFYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR   M  FIAST+GGM+IEEVA+  P+KI K+ +DP IG  S     L   L L 
Sbjct: 111 AVVLDRGLEMPIFIASTEGGMEIEEVAERSPEKIIKVAVDPTIGFRSFHALELALGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +         LY+ F ++D   +EINP+I+  +G    LD+K+ FD+NALYRH DI 
Sbjct: 171 KEQQKPFSKFAKALYEVFINEDAEQVEINPMILTGDGSFLALDAKLGFDNNALYRHSDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD +EE+  EIEA + NLSY+ L+GN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 AMRDFTEEEPSEIEASESNLSYVKLEGNVGCMVNGAGLAMATMDIIKYEGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+   VA  F+II  D +VK I +NIFGGI++CD +  GI+ A K   + +P+V+RL+
Sbjct: 291 GGANPTTVAKGFEIILKDKNVKAIFVNIFGGIVQCDRVANGIIEATKLTSVEVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           G N +    ++  +G+ N+I A +L D AQK+V A K
Sbjct: 351 GTNAEKAKEILKGAGIKNLIAAENLKDGAQKVVAAAK 387


>gi|32469357|gb|AAP83351.1| succinyl-CoA synthetase, beta subunit [Neocallimastix patriciarum]
          Length = 436

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 246/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL +YNV   KG+V  +   A  A K L     V+K+Q+ AGGRGKG F 
Sbjct: 28  LSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKLNTEDLVIKAQVLAGGRGKGHFD 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  + + V     ++LG  LITKQTG  G   N VYV +     RE Y 
Sbjct: 88  ---SGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYARREYYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS++GG++IEEVAK  P  I  +      G+T E        +   
Sbjct: 145 AILLDRATRGPVLVASSEGGVEIEEVAKTNPDAIITVPFSIKTGLTKEIALDTAKKMGFT 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D F  LYK F +KD +++EINP+     G +  +D+K  FDDNA Y+   I 
Sbjct: 205 EKCVPQAADTFLKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKQKGIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED RE+ A + NL+Y+ ++GNIGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 265 ALRDTTQEDPREVAAAKWNLNYVGMEGNIGCLVNGAGLAMATMDIIKLNGGVPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A   +V  AFKII+SD +V  IL+NIFGGIMRCD++ +G++ AVKE+ ++IPLV+RL+
Sbjct: 325 GSATAKQVKEAFKIISSDKAVSAILVNIFGGIMRCDIVAEGVIQAVKELGLDIPLVVRLQ 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V+    LI  S L++    DLD AA+K+V     V
Sbjct: 385 GTKVEEARELIRNSNLSLYAIDDLDKAAKKVVQLANVV 422


>gi|290474109|ref|YP_003466986.1| succinyl-CoA synthetase subunit beta [Xenorhabdus bovienii SS-2004]
 gi|289173419|emb|CBJ80196.1| succinyl-CoA synthetase, beta subunit [Xenorhabdus bovienii
           SS-2004]
          Length = 388

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 182/386 (47%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAEQWLGKRLVTYQTDAQGQPVHQILVEGATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLAGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L K F ++D++++EINPL+I   G L  LD K+  D NA++R  +++
Sbjct: 171 SKQVGQFTKIFMGLAKLFLERDLAMVEINPLVITTQGDLICLDGKLGADGNAMFRQAELR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAASSLTD 376


>gi|330813453|ref|YP_004357692.1| succinyl-CoA ligase [ADP-forming] beta chain [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486548|gb|AEA80953.1| succinyl-CoA ligase [ADP-forming] beta chain [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 386

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 272/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+K+   V  G  I S+   +   K +     V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKDILKKFGAEVPNGEPIFSLDEIDEKFKKIKTDKVVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L+ +  + + +LG  L+T QTGP G  V  +Y+E+ +DI +E YL
Sbjct: 58  -------GGVKIVDNLEQLKEEAKNLLGKVLVTHQTGPQGREVKRLYIEEASDISKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  +AFI+S +GGMDIEEVA   P+KI    +    G+T ED+  +    +L 
Sbjct: 111 SCLVDRASSKIAFISSAEGGMDIEEVANKTPEKITTTRVSLSKGLTKEDITQVLKPYQLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++      L  +++KA  + D +L+E+NPLI+ K  ++  LD+KI+FD NALYRH DI 
Sbjct: 171 SESIEQAEKLIQSIFKALLNTDANLIEVNPLILTKENQVLCLDAKINFDANALYRHPDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED  EIEA +++L+YI LDG IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDFDEEDPAEIEASKYDLAYIKLDGEIGCMVNGAGLAMATMDIIKLYGSEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AAF II SD +VKGILINIFGGIMRCDV+ +G+++A KE  +++PLV+RL 
Sbjct: 291 GGATKEKVSAAFNIILSDKNVKGILINIFGGIMRCDVIAEGVIAAAKETNLSVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G   + G +++ +SGL +I A DL +AAQKIV A+K
Sbjct: 351 GTKFEEGKKILEQSGLKIIPANDLSEAAQKIVEAIK 386


>gi|294941730|ref|XP_002783211.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239895626|gb|EER15007.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 421

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 171/395 (43%), Positives = 254/395 (64%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+Q+  + +KY V V  G    +   AE   K L G   VVK+Q+ AGGRG+G FK
Sbjct: 27  LNLHEHQSLNVFKKYGVCVPHGYYAKTPEEAEQFAKALGGGDVVVKAQVLAGGRGRGHFK 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     +GGV +  +         +++G+TL+TKQTG  G   N V++ +   I  E Y 
Sbjct: 87  E--NGFQGGVHIVKNPIEAKDLASKMIGNTLVTKQTGEAGKICNGVFLSERFQIASEKYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+ G    + S  GGM IE+VA ++P+ I K+ +D   G++  +   + + ++ +
Sbjct: 145 AILMDRSFGGPVMVGSKYGGMSIEDVAAEHPEAIIKIPVDINSGISDGEAREMAEKIDFE 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +       LY+ F   D +++EINPL   K+GR+ V D+K++FDDNA +R  DI 
Sbjct: 205 GEIVDEAVIAIKALYETFRQSDCTMVEINPLAETKDGRVMVCDAKVNFDDNAQFRQKDIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMD++ L GG+PANFLDVG
Sbjct: 265 SQRDITQEDPREVAASKWDLNYIGLDGNIGCMVNGAGLAMATMDLLSLKGGSPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ D+V AAF+I+  D  VK IL+NIFGGIMRCDV+ +G++ A+ E+ +  P+V+RL 
Sbjct: 325 GAAETDQVRAAFEILEKDPKVKSILVNIFGGIMRCDVIAQGVVQAMSELNMEKPIVIRLV 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G ++I ++GL V    DL++AA K V   
Sbjct: 385 GTNVEQGKKIIKDAGLKVYAFDDLNEAAAKAVELS 419


>gi|206602146|gb|EDZ38628.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 396

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 192/404 (47%), Positives = 269/404 (66%), Gaps = 17/404 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-------GPLYVVKSQIHAGG 53
           MNIHEYQAK L +++ +PV  GV++ SV  A   +   P         ++ VK+QIHAGG
Sbjct: 1   MNIHEYQAKELFKEFGIPVPNGVLVESVEEARKVVSESPLFRGESRPAVWAVKAQIHAGG 60

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           GGV++    + +   + +ILG TL+T QTGP G +V  V++E+G++
Sbjct: 61  RGKA----------GGVKLARKSEEIPDLVSQILGKTLVTHQTGPEGKKVLKVWIEEGSN 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           I RE YL ++VDRT+  +  IAST+GGM+IEEVA+ +P+KIF L +DPL G +      +
Sbjct: 111 IAREFYLGVVVDRTTRRMTLIASTEGGMEIEEVAEKHPEKIFHLALDPLEGYSPYIGRRV 170

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L L    +    ++  +L   F  +D S++EINPL++ +  RL  LD+K+ FDDNA+
Sbjct: 171 SQFLGLPFSTQTQMVNIVRDLLDFFQRRDASMVEINPLVLTREDRLIALDAKVGFDDNAV 230

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
            R   ++ LRD+SEE+  EIEA ++NL+Y+ LDGNI CMVNGAGLAMATMD+I L GG+P
Sbjct: 231 GRQPVVRGLRDLSEENPLEIEASKYNLNYVKLDGNIACMVNGAGLAMATMDVIALAGGSP 290

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLDVGGGA ++ V  AF+II  D  VKGI +NIFGGI+RC+ +  GI++A ++VKI I
Sbjct: 291 ANFLDVGGGASKETVEQAFRIILGDPHVKGIFVNIFGGIVRCERIAGGIIAAAQDVKITI 350

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           PLV+RL+G N   G  ++  SGL +  A +L + A+KIV AVKG
Sbjct: 351 PLVVRLQGTNAKEGREMLRSSGLAIQVAEELYEGAEKIVLAVKG 394


>gi|329124073|ref|ZP_08252620.1| succinyl-CoA ligase subunit beta [Haemophilus aegyptius ATCC 11116]
 gi|327467498|gb|EGF12996.1| succinyl-CoA ligase subunit beta [Haemophilus aegyptius ATCC 11116]
          Length = 389

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGVTQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++AES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAESDVNILTAQSLQQAAELAVNAAKG 387


>gi|71275180|ref|ZP_00651467.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Dixon]
 gi|71899818|ref|ZP_00681968.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|170731173|ref|YP_001776606.1| succinyl-CoA synthetase subunit beta [Xylella fastidiosa M12]
 gi|226735001|sp|B0U5F8|SUCC_XYLFM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71163989|gb|EAO13704.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Dixon]
 gi|71730409|gb|EAO32490.1| Succinyl-CoA synthetase, beta subunit [Xylella fastidiosa Ann-1]
 gi|167965966|gb|ACA12976.1| Succinate--CoA ligase (ADP-forming) [Xylella fastidiosa M12]
          Length = 387

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 182/387 (47%), Positives = 258/387 (66%), Gaps = 10/387 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L  +Y +PV  G + SS   A +A K+L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFAEYGIPVPAGRIASSADEAVTAAKSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V      +LG+ + T Q+      VN V V +  +I +ELYL
Sbjct: 58  -------GGVKFCKTTDEVKQAAATMLGTKMATYQSAGVALPVNLVLVTEAGEITKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG+DIE VA + P+KI  L +D + G+       +   L L+
Sbjct: 111 SVLVDRGTRSITYIASSEGGVDIEHVAAETPEKIQTLNVDFVEGLQPYQGRDIGFHLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LY+ F DKD+SL+E+NPL I+ NG L  LD KI+ DDNA +RH ++ 
Sbjct: 171 AKQVNQLSKIMISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRHKELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A +++L+Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S + VK I +NIFGGI+RCD++ +GI++AVKEV + +P+++RLE
Sbjct: 291 GGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDA 387
           G NVD G +L+A SGL +I A D++D 
Sbjct: 351 GTNVDAGKQLLATSGLAIIPADDINDG 377


>gi|145627822|ref|ZP_01783623.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           22.1-21]
 gi|144979597|gb|EDJ89256.1| succinyl-CoA synthetase beta subunit [Haemophilus influenzae
           22.1-21]
          Length = 389

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 270/397 (68%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV  GVV  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFERYELPVKNGVVCQSVEEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQNVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS+ GGMDIEE+A++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASSAGGMDIEEIAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GVQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLICLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ +S +N++TA +L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILTQSDVNILTAQNLQQAAELAVNAAKG 387


>gi|310821309|ref|YP_003953667.1| succinyl-CoA ligase [ADP-forming] subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394381|gb|ADO71840.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Stigmatella
           aurantiaca DW4/3-1]
          Length = 386

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 193/396 (48%), Positives = 267/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L RKY VP  +G++  S + AE+A K L  P+ VVKSQIHA         
Sbjct: 1   MKIHEYQGKELFRKYGVPTPRGILALSPNEAEAAAKELATPVVVVKSQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S        + +LG  L T QTGP G  V+ VY+E+G  I +ELYL
Sbjct: 52  -GGRGKGGGVKLAKSPAEAKELAQAMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +  + F+AS +GG++IEEVA  +P+KI +  +DP +G        L   L L 
Sbjct: 111 GVTLDRATSRITFMASREGGVEIEEVAAQHPEKILREAVDPAVGFLDFQGRKLAFGLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LYK + + D +L+EINPL+I+K+G +  LD+K++FD+NAL++H ++ 
Sbjct: 171 GPTVNKFVQFCSALYKMYTETDAALVEINPLVILKDGGVVALDAKVTFDENALFKHKELL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD++EE+ RE +AK+ +L+YIALDGNIGCMVNGAGLAMATMD IKL GG PANFLDVG
Sbjct: 231 NYRDLAEEEPRETQAKEFDLAYIALDGNIGCMVNGAGLAMATMDTIKLVGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV AAFK+I +D +VK +L+NIFGGIM+CDV+ +GI++A KEV++ +PLV+RLE
Sbjct: 291 GGASKEKVTAAFKLILADPAVKAVLVNIFGGIMKCDVIAEGIIAAAKEVQLKVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L++ SGL +  A +L  AA+K V A+K
Sbjct: 351 GTNVEKGKQLLSNSGLAITPADNLRQAAEKAVAAIK 386


>gi|296412464|ref|XP_002835944.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629741|emb|CAZ80101.1| unnamed protein product [Tuber melanosporum]
          Length = 442

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 241/398 (60%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY A  LL+ Y V V  G    +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 32  LSIHEYLAANLLKSYGVGVPGGAFAKTAEEAEAVAKDIGGEDMVIKAQVLAGGRGKGTFD 91

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTGP G     VY+ +     RE YL
Sbjct: 92  N---GLKGGVRVIFSPAEAKFFASQMIGQKLITKQTGPGGKLCTGVYICERKFARREFYL 148

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGGMDIE VAK+ P  I    ID   GVT E    +   L   
Sbjct: 149 AILMDRATQGPIIVSSSQGGMDIEGVAKEDPDAIVTTPIDIHKGVTDEVATKVATSLGFS 208

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +      NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 209 EQCIPEAVQTIKNLYKVFVEKDATQIEINPLSETNDHKVLAMDAKMGFDDNADFRQEEIF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E++A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLD G
Sbjct: 269 SWRDKTQEDPDEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDCG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++IT+D  V  I +NIFGGI+RCD + KG+++ V+ + + IP+V RL+
Sbjct: 329 GGATAQAIERAFQLITNDPKVTAIFVNIFGGIVRCDAIAKGLIATVENMNLRIPIVARLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+    RLI  SGL + +  DL DAA+K V   K V
Sbjct: 389 GTNMQEAQRLIDGSGLKIFSFEDLQDAAEKAVQFSKVV 426


>gi|224066459|ref|XP_002188599.1| PREDICTED: succinate-CoA ligase, GDP-forming, beta subunit
           [Taeniopygia guttata]
          Length = 518

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K ++  + V V +  V  S + A  A + L     V+K+QI AGGRGKG F 
Sbjct: 124 LNLQEYQSKKIMADHGVTVQRFFVADSANDALEAAQRLKAKEIVLKAQILAGGRGKGIF- 182

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K+V    ++++G  L TKQT   G  V  V V +  DI RE Y 
Sbjct: 183 --NSGLKGGVHLTKDPKTVEQLAKQMIGYNLSTKQTSKDGVTVKKVMVAEALDISRETYF 240

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGG+DIEEVA   P+ IFK  ID   G+       +   L  Q
Sbjct: 241 AILMDRACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGIKDHQALQMAKNLGFQ 300

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 301 GPLQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 360

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 361 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 420

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 421 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLE 480

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R+++ESGL + +A DL+D
Sbjct: 481 GTNVHEAQRILSESGLPITSANDLED 506


>gi|148237470|ref|NP_001089908.1| succinate-CoA ligase, GDP-forming, beta subunit [Xenopus laevis]
 gi|83318262|gb|AAI08803.1| MGC132166 protein [Xenopus laevis]
          Length = 431

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 174/395 (44%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  Y V V + +V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 37  LNLQEYQSKKLMADYGVTVQRFIVADNASEALEAAKKLKAREIVLKAQILAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +V  V V +  DI RE YL
Sbjct: 97  ---SGLKGGVHLTKDPSKVEELTKQMIGFNLTTKQTAAGGVKVQKVMVAEALDITRETYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGGMDIEEVA+  P+ IFK  ID   GV       + D L  +
Sbjct: 154 AILMDRACNGPVLVGSPQGGMDIEEVAEKTPELIFKEEIDIFEGVKDCQALRMADNLGFK 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    +    LY  F   D + +EINP      G++   D+KI+FDDNA +R  +I 
Sbjct: 214 GPLQQQAAEQIKRLYDLFLKVDATQVEINPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + +  E D  E EA  ++L YI LDGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 274 AMDNTLEMDPIENEANSYDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 334 GGVKESQVYQAFKLLTADPRVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV    R++AESGL + +A DLDDAA+K V ++
Sbjct: 394 GTNVHEAKRILAESGLPITSANDLDDAAKKAVASI 428


>gi|292572047|gb|ADE29962.1| Succinyl-CoA synthetase beta chain [Rickettsia prowazekii Rp22]
          Length = 386

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YV+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTKVYVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVAKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRIYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  ++Y AF + D + +EINPLII   G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKSVYNAFIETDATQIEINPLIINSYGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ S L +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSDLKIIPAHDLADAANKIVEAIR 386


>gi|95928577|ref|ZP_01311324.1| succinyl-CoA synthetase, beta subunit [Desulfuromonas acetoxidans
           DSM 684]
 gi|95135367|gb|EAT17019.1| succinyl-CoA synthetase, beta subunit [Desulfuromonas acetoxidans
           DSM 684]
          Length = 389

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 184/396 (46%), Positives = 254/396 (64%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L  +++PV +G V  +    E A K + G   VVK+QI+AGGRGK    
Sbjct: 1   MKIHEYQAKEILGSFDIPVPRGRVAVTADQVERAAKMMGG-RCVVKAQIYAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    +      +E+ G  L+T QTGP G +V  + VE+  ++ +E YL
Sbjct: 57  -------GGVQVAHHPEQAHEIAKELFGKRLVTHQTGPEGLKVRRILVEETVEVGQEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     IAS +GG++IEEVA + P+KI  L IDP  G+ S     +   + + 
Sbjct: 110 SITLDRQTSRYCLIASAEGGVNIEEVAANAPEKIHTLTIDPYTGLRSYQARQIVHKIGMT 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    D   L  ++Y+   DKD SL+EINPL++ K G L  LD+KI+FDDNA++RH +  
Sbjct: 170 GGVAEDCVRLILDMYRCCLDKDCSLVEINPLVVTKAGWLLALDAKINFDDNAVFRHWEYH 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E++D S+ D  EI A + +LSYI LDGNIGCMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 230 EMQDYSQMDPLEISAGKFDLSYIKLDGNIGCMVNGAGLAMATLDVLKENGGDPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AFKII  D  V+ + +NIFGGIMRCDV+  GI+ A  E+   +P+V+R++
Sbjct: 290 GGATREKVAEAFKIILQDKDVEAVFVNIFGGIMRCDVIAHGIIEAAGEMACQLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G+ V+ G  L+ ES LNV  A  L + A+ IV  +K
Sbjct: 350 GSQVEEGKALLKESPLNVQCADFLGEGAKMIVAMMK 385


>gi|297832640|ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330042|gb|EFH60461.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 421

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV  SS+   + AI+ +       VVKSQI AGGRG G 
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQEVFPNESELVVKSQILAGGRGLGT 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +            ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 87  FK---SGLKGGVHIVK-RGQAEDIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+++DR S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 143 YFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  +
Sbjct: 203 PKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 IFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+R
Sbjct: 323 VGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVSLKVPVVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 383 LEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKAL 419


>gi|15606731|ref|NP_214111.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
 gi|6647847|sp|O67546|SUCC_AQUAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|2983961|gb|AAC07508.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
          Length = 385

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 177/395 (44%), Positives = 247/395 (62%), Gaps = 14/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  KY +PV +G V  S+  A+   + L     VVK+QIH GGRGK    
Sbjct: 1   MKLHEHQAKEIFAKYGIPVPEGKVAFSLKEAKEVAEELGEFPLVVKAQIHCGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   +  +   +  +LG  L T Q  P G  VN V +E   +I +E YL
Sbjct: 58  -------GGVKIVKDMDELEKAVESLLGKVLKTFQC-PDGKPVNRVLIEKATNIDKEYYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+      +AS  GGM+IEE+ K+ P+ I    IDP +G+       L   L L 
Sbjct: 110 AITLDRSKSKPVIMASAAGGMEIEEIVKENPEAIIIETIDPELGLMPYQARELAFKLNLP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   LY+ + D D SL+EINPL++ K G L  LD+K+  DDNAL+RH D++
Sbjct: 170 ---VKEFASIALKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDIDDNALFRHKDLE 226

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++    E+EAK++ L+YI L+GNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 227 EMEDETQLPQLEVEAKKYGLNYIKLNGNIGCMVNGAGLAMATMDIIKLAGGEPANFLDVG 286

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A AF+I+ +D  VK + INIFGGI+R D L +G++ A K V++ +P+V RLE
Sbjct: 287 GGANVEQIANAFRILMADPDVKAVFINIFGGILRVDRLAQGLIEASKMVELRVPIVARLE 346

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G R++ ESGLN I A D+ D A+K V   
Sbjct: 347 GTNVEEGKRMLQESGLNFIIAEDMWDGAKKAVEIA 381


>gi|72015065|ref|XP_786753.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115975381|ref|XP_001177158.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 452

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 174/396 (43%), Positives = 253/396 (63%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY    LL +  VP+ +  V ++   A    K+L     VVK+Q+ AGGRGKG F 
Sbjct: 41  LSIHEYMGYDLLEEAGVPIPRAEVATTAQRAYEIAKSLGSGDVVVKAQVLAGGRGKGAF- 99

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S + V     +++G+ L+TKQTG  G   N V V +   + RE Y 
Sbjct: 100 --TSGLKGGVKLAFSPEEVKDLASQMIGNKLVTKQTGEGGRICNSVLVCERMYVRREYYF 157

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       + S+QGG++IE+VA + P+ I K  ID   G+       +  ++   
Sbjct: 158 AITMERAFNGPVLVGSSQGGVNIEDVAAENPEAIIKEPIDIEAGIQRSQAEKMAKLMGFP 217

Query: 181 GQARIDGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A     + F NLY   F   D ++LEINPL+    G++  +DSKI+FDDNAL+R   I
Sbjct: 218 DRAVEQAAETFMNLYNNIFIKYDATMLEINPLVEDSEGQVLCMDSKINFDDNALFRQKKI 277

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD S+ED RE+ A ++NL+YI LDG+IGC+VNGAGLAM+TMDIIKL+GG PANFLDV
Sbjct: 278 HDLRDWSQEDEREVSAAEYNLNYIGLDGDIGCLVNGAGLAMSTMDIIKLHGGTPANFLDV 337

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  D+V  AFK+ITSDS V+ I++NIFGGIM+CD++ +GI++A  E+ + +P+V+RL
Sbjct: 338 GGGATADQVKQAFKLITSDSKVQAIMVNIFGGIMQCDIIAQGIIAAANELNLKVPIVVRL 397

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +G  VD    +IA S L ++   DLD+AA+ +V   
Sbjct: 398 QGTMVDEAKAIIAHSDLRILACDDLDEAAKMVVRLS 433


>gi|82703117|ref|YP_412683.1| succinyl-CoA synthetase, beta subunit [Nitrosospira multiformis
           ATCC 25196]
 gi|82411182|gb|ABB75291.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosospira
           multiformis ATCC 25196]
          Length = 398

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 193/386 (50%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L ++ +P+ +G    +V  A +  K L G  +VVK+QIHA         
Sbjct: 1   MKIHEYQAKHILHQFGIPIPRGHSCFNVDEAVATAKKLGGSTWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG TL+T QTG  G  V  + VE G DI +E Y+
Sbjct: 52  -GGRGKGGGVKIARSLDEVKQFAEKILGMTLVTPQTGSQGQIVRRLLVEQGLDIRKEFYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+VDR    V  +AS +GGMDIE VA DYP+KI K+ IDP  G+T+ +   +   +   
Sbjct: 111 GLVVDRGRRRVCLMASAEGGMDIERVAADYPEKIHKVYIDPGAGLTATEAEDITSRIGFS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  +   L  NLY+A+   D SL+EINPLI+    R+  LD+K++FDDNAL+RH DI 
Sbjct: 171 GAAVAETAALLQNLYRAYDSTDASLVEINPLILTGENRIVALDAKMNFDDNALFRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+ EED+ EIEA ++ LSYI+LDGNIGC+VNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 DLRDLDEEDAAEIEASRYGLSYISLDGNIGCLVNGAGLAMATMDIIKFYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++ ILINIFGGIM+CDV+ +G+++A +EV++N+PLV+RLE
Sbjct: 291 GGATTEKVMEAFKLMLRNPRLQAILINIFGGIMKCDVIAEGVVAAAREVRLNVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N +IG +++ ESGL +I+A ++ D
Sbjct: 351 GTNAEIGKKILTESGLAIISAANMAD 376


>gi|47219005|emb|CAG02043.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 431

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 235/396 (59%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+++  V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMQESGVAVQRFYVADTASDALEAAKKLNAKEIVLKAQILAGGRGKGVFD 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V     ++LG  L TKQT   G +V  V V +  DI RE Y 
Sbjct: 98  ---SGLKGGVHLTKDPAVVGDLASKMLGFNLTTKQTPQEGVKVKTVMVAEALDISRETYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK +ID   GV  +    +   L  +
Sbjct: 155 AILMDRSYNGPVMVGSPQGGVDIEEVAASNPELIFKEVIDIFEGVRDDQALRMAVNLGFK 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  D+ 
Sbjct: 215 GVLQRQAADQIKRLYDLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDVF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+SE D  E EA +  L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 275 AMDDMSESDPTETEAAKWGLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++ +D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVQERQVYEAFKLLNADPKVEAILVNIFGGIVNCAIIANGITKACRELQLKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV    R++ ESGL +  A DLDDAA K V A++
Sbjct: 395 GTNVHEAKRILRESGLPITAAEDLDDAAMKAVAAIR 430


>gi|294871826|ref|XP_002766061.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239866626|gb|EEQ98778.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 421

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 171/395 (43%), Positives = 254/395 (64%), Gaps = 2/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+Q+  + +KY V V  G    +   AE   K L G   VVK+Q+ AGGRG+G FK
Sbjct: 27  LNLHEHQSLNVFKKYGVCVPHGYYAKTPEEAEQFAKALGGGDVVVKAQVLAGGRGRGHFK 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     +GGV +  +         +++G+TL+TKQTG  G   N V++ +   I  E Y 
Sbjct: 87  E--NGFQGGVHIVKNPIEAKDLASKMIGNTLVTKQTGEAGKICNGVFLSERFQIASEKYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+ G    + S  GGM IE+VA ++P+ I K+ +D   G++  +   + + ++ +
Sbjct: 145 AILMDRSFGGPVMVGSKYGGMSIEDVAAEHPEAIIKIPVDINSGISDGEAREMAEKIDFE 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +       LY+ F   D +++EINPL   K+GR+ V D+K++FDDNA +R  DI 
Sbjct: 205 GEIVDEAVIAIKALYETFRQSDCTMVEINPLAETKDGRVMVCDAKVNFDDNAQFRQKDIF 264

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+++ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMD++ L GG+PANFLDVG
Sbjct: 265 SQRDITQEDPREVAASKWDLNYIGLDGNIGCMVNGAGLAMATMDLLSLKGGSPANFLDVG 324

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A+ D+V AAF+I+  D  VK IL+NIFGGIMRCDV+ +G++ A+ E+ +  P+V+RL 
Sbjct: 325 GAAETDQVRAAFEILEKDPKVKSILVNIFGGIMRCDVIAQGVVQAMSELNMEKPIVIRLV 384

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G ++I ++GL V    DL++AA K V   
Sbjct: 385 GTNVEQGKKIIKDAGLKVYAFDDLNEAAAKAVELS 419


>gi|71082944|ref|YP_265663.1| succinyl-CoA synthetase subunit beta (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|123647321|sp|Q4FP29|SUCC_PELUB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71062057|gb|AAZ21060.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 386

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 205/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY   V +GV   +V       K+L    +V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGAVVPEGVFAFTVDELIEKAKSLKTEKFVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +++  +    +E+LG TL+T QTGP G  V  +YVE+ ++I +E YL
Sbjct: 58  -------GGVKILNTIDELSVAAKELLGKTLVTHQTGPAGREVKRLYVEESSNIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  + FI+S QGGMDIEEVA+  P+KI    ID    ++  D   +  +  L 
Sbjct: 111 SCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+     L  ++YK F   D +++E+NPLI+ K  ++  LD+K++FD NAL+RH +I 
Sbjct: 171 DDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  EI+A +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLNEEDPTEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AA KII SD +VKGILINIFGGIMRCDVL +G++ A KE+ I++PLV+RL 
Sbjct: 291 GGASKEKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  SGL +I+A +LDDAAQKIV A+K
Sbjct: 351 GTNFKEGKEILDNSGLKLISAENLDDAAQKIVEAIK 386


>gi|145639284|ref|ZP_01794890.1| transcriptional regulator CysB [Haemophilus influenzae PittII]
 gi|145271587|gb|EDK11498.1| transcriptional regulator CysB [Haemophilus influenzae PittII]
 gi|309751161|gb|ADO81145.1| Succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           R2866]
          Length = 389

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|319776562|ref|YP_004139050.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae F3047]
 gi|317451153|emb|CBY87386.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           F3047]
          Length = 389

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SL+E+NPL++   G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTPQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|58698202|ref|ZP_00373123.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630876|ref|YP_002727667.1| Succinyl-CoA synthetase, beta subunit [Wolbachia sp. wRi]
 gi|254778456|sp|C0R4N4|SUCC_WOLWR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58535283|gb|EAL59361.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592857|gb|ACN95876.1| Succinyl-CoA synthetase, beta subunit [Wolbachia sp. wRi]
          Length = 383

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 210/396 (53%), Positives = 270/396 (68%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+NV V KG V +S    ++ +  L   ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEVLHKFNVSVPKGFVATSAEEVKTQVSQLKSDVFVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +     +++++G TL+T QTGP+G +V  VYVE+G+ I +E YL
Sbjct: 58  -------GGVKLAKSAEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++D       FI S++GGMDIEEVAK+ P KI K  ID     TS D + L     L 
Sbjct: 111 SLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDIDSA---TSFDSSKLSSSFHLS 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  N+Y AF   D S +EINPL+   +G    LD+KI+FDDNALYRH +I 
Sbjct: 168 PEQIEKITNVAKNIYDAFIATDASQIEINPLVETSSGDFIALDAKINFDDNALYRHPEIM 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ LSYI +DG+IGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 228 ELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  AFKII SDS+VKGIL+NIFGGIMRCD++  GI++A KE+ I +PLV+RL 
Sbjct: 288 GGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ESGLN+I A +L DAAQKIV  VK
Sbjct: 348 GTNFEEGKKILEESGLNIIAADELGDAAQKIVKEVK 383


>gi|255036495|ref|YP_003087116.1| succinyl-CoA synthetase subunit beta [Dyadobacter fermentans DSM
           18053]
 gi|254949251|gb|ACT93951.1| succinyl-CoA synthetase, beta subunit [Dyadobacter fermentans DSM
           18053]
          Length = 407

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 189/401 (47%), Positives = 259/401 (64%), Gaps = 13/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K++L+KY V + +G+V  +   A    + L        YVVKSQIHAGGRGK
Sbjct: 1   MNIHEYQGKSVLKKYGVRIQEGLVADTPDKAVEVARELSQQTGTKWYVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           GR        + GV +  S++ V +    ILG  L+T QTG  G RVN V + +     G
Sbjct: 61  GRIV---GSEQRGVALAKSVEDVRTISNNILGKVLVTHQTGAEGKRVNKVLIAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E YLS+L+DR       +AST+GGMDIEEVA+  P+KI K  IDP +G+      
Sbjct: 118 PSEPKEYYLSILLDRGRNCNVIMASTEGGMDIEEVAERTPEKIIKEWIDPKVGLQPFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G A  +       LY+A+ + D S+ EINP++   + ++  +D+K+  DDN
Sbjct: 178 KVAFALGLEGDAFKEMVKFISALYRAYAESDSSMFEINPVLKTSDNKILAVDAKVDLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH ++ E+RD +EED  E+EA  +NL+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALYRHPELAEMRDTNEEDPLEVEAGANNLNYVKLDGNVGCMVNGAGLAMATMDLIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F+II  D +VK ILINIFGGI+RCD +  G++ A K + +
Sbjct: 298 EPANFLDVGGGANARTVEAGFRIILKDPNVKAILINIFGGIVRCDRVAAGVVEAYKAIGE 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N + G R+I ESGL V +AI+  +AA K+
Sbjct: 358 IPVPIIVRLQGTNAEEGARIINESGLKVYSAIEFKEAAAKV 398


>gi|15604298|ref|NP_220814.1| succinyl-CoA synthetase subunit beta [Rickettsia prowazekii str.
           Madrid E]
 gi|3915040|sp|O05966|SUCC_RICPR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|2073500|emb|CAA72445.1| succinyl-CoA synthetase beta-subunit [Rickettsia prowazekii]
 gi|3860990|emb|CAA14890.1| SUCCINYL-COA SYNTHETASE BETA CHAIN (sucC) [Rickettsia prowazekii]
          Length = 386

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +LRKY VP + G+V++        I  L   +YV+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINETIDKLNTKVYVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +       ++ G  L+T QTGP G +VN +Y+E G DIL+E Y 
Sbjct: 58  -------GGVKVAKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNRIYIESGCDILKEYYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR++  + FIAST+GG+DIE VA+  P+KI K  +DP  G+    +  +   L  +
Sbjct: 111 SIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGFK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   +Y AF + D + +EINPLII   G L  LD+KI+FDDN L++H +I 
Sbjct: 171 DNQAKQMKEIVKAVYNAFIETDATQIEINPLIINSYGNLLALDAKITFDDNGLFKHPNIT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 AMRDHDEEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V  A KII SD  VKGIL+NIFGGIMRCD++ +GI++A K++ I +PLV+RL 
Sbjct: 291 GGADRERVKEALKIILSDKEVKGILVNIFGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G  +++ S L +I A DL DAA KIV A++
Sbjct: 351 GTNVEKGKEILSNSDLKIIPAHDLADAANKIVEAIR 386


>gi|219870877|ref|YP_002475252.1| succinyl-CoA synthetase subunit beta [Haemophilus parasuis SH0165]
 gi|254778440|sp|B8F4Q2|SUCC_HAEPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219691081|gb|ACL32304.1| succinyl-CoA synthetase subunit beta [Haemophilus parasuis SH0165]
          Length = 388

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 263/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +  KY +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQIFAKYKLPVSQGIACKTADEAVEAIKQLKGDAWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +YVE+ A I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYVEETAGIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA   P+ + K+ IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRSSQKVVFMASSAGGMNIEEVAAKTPELLHKVAIDPLVGGMAYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F +KD+SLLEINPL++   G L  LD+K+  D NALYR  ++ 
Sbjct: 171 GDQIKQFSFIFTQLAKLFVEKDLSLLEINPLVVTTEGNLLCLDAKMVVDGNALYRQPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREALAESHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++  GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDKAVKAVLVNIFGGIVRCDLIADGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAELGREILAKSGLNIIAAATLTDAAVEAVKAAGG 387


>gi|66548261|ref|XP_624343.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Apis mellifera]
          Length = 448

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 183/395 (46%), Positives = 246/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 37  LNVHEHISYSLLNEAGVPTPKFGVAKTPDEAAKLAADLKSKDIVLKAQVLAGGRGKGHFK 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++  + +       ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 97  GTNIS---GVKMCETPEEAKKLASQMLGKLLITKQTGEAGRICNAVMVTQRMFPRKEYYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T +    +   L LQ
Sbjct: 154 AVMMERAFGGPVIIASSQGGVNIEEVAATNPSAIMYEPIDIYKGITKDQAERIAIKLGLQ 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++  NLY+ F  KD  LLE+NPL    NG+   LD K  FDDNA +R  ++ 
Sbjct: 214 -NVKDYISNIIVNLYQMFLKKDALLLEVNPLAEDVNGQYFALDCKCRFDDNAEFRQKELF 272

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED++E+EA +++L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 SLRDWTQEDTKEVEAAKYDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 332

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 333 GGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 392

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA +GL ++   DLD+AA+  V   
Sbjct: 393 GTNVDEAKALIANAGLKIVPIDDLDEAARVAVKLS 427


>gi|268317249|ref|YP_003290968.1| succinyl-CoA synthetase, beta subunit [Rhodothermus marinus DSM
           4252]
 gi|262334783|gb|ACY48580.1| succinyl-CoA synthetase, beta subunit [Rhodothermus marinus DSM
           4252]
          Length = 395

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 180/402 (44%), Positives = 249/402 (61%), Gaps = 14/402 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           M +HEYQAK +L++Y V    G V  +V  A  A + L       L+VVK+QIHA     
Sbjct: 1   MKLHEYQAKDILQRYGVATQPGYVARTVEEAVEAARRLQQEHGYELFVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++   ++ V      ILG  L+T QTGP G +V  V V    DI +
Sbjct: 56  -----GGRGKGGGVKLAKGIEEVREKAGAILGMNLVTPQTGPEGQKVRAVLVAGAVDIAK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR       +AST+GG++IEEVA   P+KI K+ +DP IG+       L   
Sbjct: 111 EYYLGITLDRQRSQNVIMASTEGGVEIEEVAARSPEKILKVWVDPTIGLRPFQARQLAFG 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L  +G A          LY+A+ + D SL EINPL++ K G +  +D+KI+ DDNAL+RH
Sbjct: 171 LGFEGNAFKQAVQFIQALYRAYEETDSSLAEINPLVLTKQGDVVAVDAKINLDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ ELRD+ EED  E+EA ++ L+Y+ L GN+GCMVNGAGLAMATMD+IKL GG PANF
Sbjct: 231 PDLAELRDIHEEDPLEVEASKYRLNYVRLTGNVGCMVNGAGLAMATMDLIKLAGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  + V A F+II  D +VK IL+NIFGGI+RCD + +GI+ A ++V+IN+PL+
Sbjct: 291 LDVGGGASPETVEAGFRIILKDPNVKVILVNIFGGIVRCDRVARGIVEAARKVQINVPLI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +RL+G N +    ++ +SGL + TA    + A K+  A++ V
Sbjct: 351 VRLQGTNAEEARAILEQSGLEIETATLFKEVADKVNQALQRV 392


>gi|145641204|ref|ZP_01796784.1| transcriptional regulator CysB [Haemophilus influenzae R3021]
 gi|145274041|gb|EDK13907.1| transcriptional regulator CysB [Haemophilus influenzae 22.4-21]
          Length = 389

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDDVDLVLAQLAGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|145631246|ref|ZP_01787019.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae R3021]
 gi|144983173|gb|EDJ90668.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae R3021]
 gi|301169937|emb|CBW29541.1| succinyl-CoA synthetase, beta subunit [Haemophilus influenzae
           10810]
          Length = 389

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLAGGKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVHDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +++ +S +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEIGRQILVQSDVNILTAQSLQQAAELAVNAAKG 387


>gi|307178345|gb|EFN67099.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Camponotus floridanus]
          Length = 449

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 185/395 (46%), Positives = 242/395 (61%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYSLLNEAGVPTPKFGVAKTADEAAKLAANLKTKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++  + +   S    +LG  LITKQTG  G   N V V       +E YL
Sbjct: 98  GTNVS---GVKMCETPEEAKSLASHMLGKLLITKQTGEAGRICNAVMVTQRMFPRKEYYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E    +   L L 
Sbjct: 155 AVMMERAFGGPVIIASSQGGVNIEEVAATNPNAIMYEPIDINKGITKEQAERIITKLGL- 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++  NLY+ F  KD  LLE+NPL    NG    LD K  FDDNA +R  ++ 
Sbjct: 214 DNVKDYISNIILNLYQMFLKKDALLLEVNPLAEDINGNYFALDCKCRFDDNAEFRQKELF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED +E+EA + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 274 SLRDWSQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 334 GGASASAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA +GL ++   DLD+AA+  V   
Sbjct: 394 GTNVDEAKALIANAGLKIVPIDDLDEAARVAVKLS 428


>gi|4512117|gb|AAD21622.1| succinyl-CoA synthetase beta subunit [Pseudomonas aeruginosa PAO1]
          Length = 388

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 182/373 (48%), Positives = 253/373 (67%), Gaps = 10/373 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +   A  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE+VA D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++LLE+NPL+I K+G L  LD+KI+ D NALYR   ++
Sbjct: 171 GDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D+RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAE 373
           G N ++G +++AE
Sbjct: 351 GNNAELGAKVLAE 363


>gi|241958942|ref|XP_002422190.1| succinyl-CoA ligase, beta subunit, mitochondrial precursor,
           putative; succinyl-CoA synthetase beta chain, putative
           [Candida dubliniensis CD36]
 gi|223645535|emb|CAX40194.1| succinyl-CoA ligase, beta subunit, mitochondrial precursor,
           putative [Candida dubliniensis CD36]
          Length = 415

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 167/395 (42%), Positives = 236/395 (59%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y VP+ KG   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLSEYGVPIPKGYPATTPEGAYDAAKKLGTNELVIKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E Y+
Sbjct: 80  ---SGLQGGVKLISSAEEAKDLASQMLNHKLITKQTGAAGKEVTAVYIVERRDAASEAYV 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       +AS QGGMDIE VA   P  I    +    GV+      +   L   
Sbjct: 137 AILMDRARQTPVIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEGVSDSLATEIAGALGFT 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +      +LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 197 QDAIPEAAKTIQSLYKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED +E EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 257 SWRDPTQEDPQEAEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SD  V GI +NIFGGI+RCD + KG+++A K  K++IP+V+RL+
Sbjct: 317 GTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVAKGLIAATKNFKLDIPVVVRLQ 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N+     LI  SGL +    DLD AA+KIV   
Sbjct: 377 GTNLAEAKELIENSGLKLYAFEDLDPAAEKIVQLA 411


>gi|332841276|ref|XP_003314186.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Pan troglodytes]
 gi|119629183|gb|EAX08778.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_d
           [Homo sapiens]
 gi|221045930|dbj|BAH14642.1| unnamed protein product [Homo sapiens]
          Length = 405

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 171/392 (43%), Positives = 242/392 (61%), Gaps = 3/392 (0%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+   +  
Sbjct: 1   MSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE---SGL 57

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y ++ ++R
Sbjct: 58  KGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMER 117

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           +      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +         
Sbjct: 118 SFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVES 177

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS 246
             +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D +
Sbjct: 178 AAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWT 237

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           +ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   
Sbjct: 238 QEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVH 297

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
           +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD 
Sbjct: 298 QVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDD 357

Query: 367 GNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
              LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 358 AKALIADSGLKILACDDLDEAARMVVKLSEIV 389


>gi|260582125|ref|ZP_05849919.1| transcriptional regulator CysB [Haemophilus influenzae NT127]
 gi|260094757|gb|EEW78651.1| transcriptional regulator CysB [Haemophilus influenzae NT127]
          Length = 389

 Score =  451 bits (1160), Expect = e-125,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 264/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKAS-- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 59  --------GVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SLLE+NPL++ + G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFIGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILVESDVNILTAQSLQQAAELAVNAAKG 387


>gi|21593189|gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
          Length = 421

 Score =  451 bits (1160), Expect = e-125,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 259/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV  SS+   + AI+ +       VVKSQI AGGRG G 
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGT 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +            ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 87  FK---SGLKGGVHIVK-RDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+++DR S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 143 YFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  +
Sbjct: 203 PKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 VFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+ 
Sbjct: 323 VGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVS 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 383 LEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKAL 419


>gi|114330621|ref|YP_746843.1| succinyl-CoA synthetase subunit beta [Nitrosomonas eutropha C91]
 gi|114307635|gb|ABI58878.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosomonas
           eutropha C91]
          Length = 390

 Score =  451 bits (1160), Expect = e-125,   Method: Composition-based stats.
 Identities = 177/394 (44%), Positives = 258/394 (65%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L +Y + +A+G +  SV  A    + +   ++VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILAEYGIKLAEGGLAYSVEEAVQRSREIGSNVWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G +++  S + + +    +LG  L+T QTGPTG   + +Y+E G DI RE+YL
Sbjct: 58  -------GAIKICRSHQEIETAAESLLGKKLVTHQTGPTGKLCSKLYIEAGTDIAREVYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L++DR+   +  + S QGGMDIE +A   P  I K+ I+P +G+      ++   L L 
Sbjct: 111 ALMIDRSHERIVMVGSAQGGMDIETLAVTNPGAIKKIHIEPAVGLQDFQARTMAFSLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+            Y+A  D D ++LEINPL++ +N  L  LD+K+SFD+NAL+R   + 
Sbjct: 171 GELLNHAIKTIRGCYRALRDLDANILEINPLVVTRNNELIALDAKMSFDENALFRRHRVS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ D RE+ A +  LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDNTQIDPREVAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +DS+VK +L+NIF GI RCD + +G++ AV+ +   +PLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADSNVKAMLVNIFAGINRCDWIAEGVVQAVRNIGTTVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G R+IA+SGL +ITA  L +AA+K VHA
Sbjct: 351 GTNVEEGRRIIADSGLPIITAETLAEAAEKAVHA 384


>gi|323507901|emb|CBQ67772.1| probable beta-succinyl CoA synthetase precursor [Sporisorium
           reilianum]
          Length = 426

 Score =  451 bits (1160), Expect = e-125,   Method: Composition-based stats.
 Identities = 165/397 (41%), Positives = 239/397 (60%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  +L KY + V K V   +   A  A ++  G   V+K+Q+ AGGRGKG F 
Sbjct: 29  LSIHEHLSMDVLTKYGINVPKYVAAKTPDEAYKAAQSFGGKEIVIKAQVLAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV +  + +       +++G+ LITKQTG  G   N V + +      E Y+
Sbjct: 89  ---SGLQGGVHLIKTPEEARDLAAKMIGNKLITKQTGAAGRLCNAVMIAEARPPHHEYYV 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR + +   IAS QGGM IEEVA + P  I    ID   G++ ED   +   L   
Sbjct: 146 AVLNDRATQLPVLIASNQGGMSIEEVAAENPDAIITTPIDFEKGLSKEDALGIAKKLGFT 205

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G +      + F  LYK F +KD + +EINPL   K+G +  +D+K+ FD+NA +R  D+
Sbjct: 206 GVKQEEQAAETFQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQADV 265

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD ++ED  E+EA ++ L++I LDGNIGC+VNGAGLAMATMD++KL GG PANFLDV
Sbjct: 266 FELRDTTQEDPDEVEAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDV 325

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A    V  AF+++ + + VKGI +NIFGGI+ C  + +GI+ A +E+ + IPLV+RL
Sbjct: 326 GGTASASSVKKAFELLLNSNEVKGIFVNIFGGIVSCKKIAEGIIQATQELDLTIPLVVRL 385

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +G +      LI  S L +     LD+AA K V + K
Sbjct: 386 QGTHEKEAKELIKSSNLKIFAFDGLDEAAAKAVESAK 422


>gi|290561006|gb|ADD37905.1| Succinyl-CoA ligase subunit beta, mitochondrial [Lepeophtheirus
           salmonis]
          Length = 418

 Score =  451 bits (1160), Expect = e-125,   Method: Composition-based stats.
 Identities = 183/395 (46%), Positives = 250/395 (63%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL  +NV V K ++  +   A +  K  P   YV+K+QI AGGRGKG F 
Sbjct: 25  LNLLEYQSKGLLEGHNVKVQKFLMAENDAEAIAIPKKFPCDEYVIKAQILAGGRGKGIFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +    + V S    +LG +LITKQT PTG  V+ V V +  DI RE Y 
Sbjct: 85  N---GFKGGVHLTKDKRQVASLCSNMLGHSLITKQTPPTGIPVSKVMVAEAIDIKRETYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       +AS  GG+DIE+VA+  P++I K+ I    G T E    +   L  +
Sbjct: 142 CILLDREYNGPVIVASPDGGVDIEDVAERTPERIKKIPISISTGCTHEIAQDVAAFLGFE 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+ +        NLY  F   D   LE+NPL    +G +   D+K+ FDDNA +R  +I 
Sbjct: 202 GELKEQCAGQIKNLYDMFIKVDCVQLEVNPLAETTDGMIYTADAKLGFDDNAEFRQKNIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D +E D RE+EA  HNL+Y+ +DGNIGC+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 262 KMEDTTEMDPREVEAAAHNLNYVQMDGNIGCLVNGAGLAMATMDIIKLYGGDPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +++V  AF+IIT DS VK IL+N+FGGI+ C  +  G+++A K + +N+PLV+RLE
Sbjct: 322 GSVQEEQVKEAFRIITEDSKVKAILVNVFGGIVNCATIANGVVNACKSINLNLPLVVRLE 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+   +++ ESGL + +A DLDDAA+K V A+
Sbjct: 382 GTNVEAAKKILEESGLPIQSAADLDDAAKKAVKAL 416


>gi|327289465|ref|XP_003229445.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 460

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 160/396 (40%), Positives = 235/396 (59%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  +PV  G++  +   A +  + +     VVK+Q+  GGR  G F+
Sbjct: 51  LSLHEYLSMKLLKEEGIPVPYGLLARTPEEAYTVARKIGTDDLVVKAQVLTGGRQNGVFE 110

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV+V  S +        ++G  L T+QTG  G   N V + +   + RE Y 
Sbjct: 111 ---GGLRGGVQVVCSPEEAREVASRMIGKRLFTQQTGKMGRICNQVLICERKYLRREYYF 167

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R       I S+QGG+ IE+VA + P  I K  +D + G+T E    L   +   
Sbjct: 168 AITMERAFQGPVLIGSSQGGVRIEDVAAENPGAIIKQPVDIMEGITEEQAVQLAQKMGFP 227

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  D    +Y  F   D+ LLEINPL+    G +  +D+KI FD N+ +R   I 
Sbjct: 228 HHLLYEVADNMIKIYNFFIKYDVILLEINPLVEDSTGHVMCMDAKIIFDSNSAFRQQKIF 287

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL+D ++ D R+ EA    L+YIALDGNIGC+VNGAGLAMATMDIIKL+GG PAN+L+VG
Sbjct: 288 ELQDWTQLDERDREAANAELNYIALDGNIGCLVNGAGLAMATMDIIKLHGGTPANYLNVG 347

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+ITS+  V+ IL+NIFGG+MRCDV+  GI+ + K++ + IP+V+RL+
Sbjct: 348 GSATVEQVTEAFKLITSNEKVQAILVNIFGGLMRCDVIAHGIIMSAKDLDLKIPIVVRLQ 407

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  V     LIAESGL ++   DLD AA+  V   +
Sbjct: 408 GTRVKDAKNLIAESGLKILPCDDLDQAAKMAVKLSE 443


>gi|194388002|dbj|BAG61414.1| unnamed protein product [Homo sapiens]
          Length = 405

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 171/392 (43%), Positives = 243/392 (61%), Gaps = 3/392 (0%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+   +  
Sbjct: 1   MSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE---SGL 57

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y ++ ++R
Sbjct: 58  KGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMER 117

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           +      I S++GG++IE+VA + P+ I K  ID   G+  E    L   +         
Sbjct: 118 SFQGPVLIGSSRGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVES 177

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS 246
             +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D +
Sbjct: 178 AAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWT 237

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           +ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   
Sbjct: 238 QEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVH 297

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
           +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD 
Sbjct: 298 QVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDD 357

Query: 367 GNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
              LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 358 AKALIADSGLKILACDDLDEAARMVVKLSEIV 389


>gi|291612996|ref|YP_003523153.1| succinyl-CoA synthetase, subunit beta [Sideroxydans lithotrophicus
           ES-1]
 gi|291583108|gb|ADE10766.1| succinyl-CoA synthetase, beta subunit [Sideroxydans lithotrophicus
           ES-1]
          Length = 389

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 189/384 (49%), Positives = 262/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR+++VP  +G+   +V  A +A K L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILREFSVPTPRGMACFNVEEAVAAAKQLGGNVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L+T QTGP G  V+ + +E+GA I RE Y+
Sbjct: 52  -GGRGKGGGVKVAKSLDEVRQFASQILGMHLVTHQTGPEGQVVHRLLIEEGARIAREFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR S  VA +AS++GGM+IEEVAK  P+KI  + IDP  G+   +       + + 
Sbjct: 111 GMVVDRGSQRVALLASSEGGMEIEEVAKHSPEKIHTVRIDPATGLNEAEAVRTARAIGIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   +   LY+AF +KD  L EINPL++  + R+  LD+K +FD NALYRH +I 
Sbjct: 171 DAAIAEAVKVLWGLYQAFVEKDAMLAEINPLVLTADNRVLALDAKFNFDSNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  EIEA + +LSYI LDG+IGC+VNGAGLAMATMDIIKLYGG+PANFLDVG
Sbjct: 231 ALRDLDEEDPAEIEASKFDLSYIQLDGDIGCLVNGAGLAMATMDIIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV  AFK++  +  +K IL+NIFGGIM+CDV+ +G+++A +EV + +PLV+RLE
Sbjct: 291 GGASKEKVTEAFKLMLKNPHLKAILVNIFGGIMKCDVIAEGVVAAAREVHLAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G +++AESGL +I+  D+
Sbjct: 351 GTNVELGKKILAESGLPIISGNDM 374


>gi|254796635|ref|YP_003081471.1| succinyl-CoA synthetase beta chain [Neorickettsia risticii str.
           Illinois]
 gi|254589873|gb|ACT69235.1| succinyl-CoA synthetase beta chain [Neorickettsia risticii str.
           Illinois]
          Length = 392

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/399 (51%), Positives = 267/399 (66%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK---TLPGPLYVVKSQIHAGGRGKG 57
           MNIHEYQAK +L+ Y VP   G ++          K    L G ++ VK+QIHAGGRGK 
Sbjct: 1   MNIHEYQAKEILQVYGVPTPAGFLVQENTETSEIAKSLARLGGEVFAVKAQIHAGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S++  I + +++LG  L+T QT P G +V  VY+E G  IL+E
Sbjct: 61  ----------GGVVICRSVEEAIDNTKKMLGMNLVTHQTSPAGQKVRKVYIEAGQSILKE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            YLS++VDR S  VA IAS +GGM+IEEVA+  P+KI K+ +DP IG++      +   L
Sbjct: 111 YYLSMVVDRESAKVAIIASEEGGMEIEEVARLKPEKIKKVFVDPSIGISDFHTRKIGFEL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L          L   LY  F  +D S +EINPLI    G    LD+KI+FDDNALYRH 
Sbjct: 171 GLSLAQIKQFTPLVKKLYALFVTRDASQVEINPLIANSRGEFIALDAKINFDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D  ELRD+ EED +EIEA ++NL+YI ++G+IGCMVNGAGLAMATMDIIK YG +PANFL
Sbjct: 231 DTLELRDLYEEDPKEIEASKYNLNYIKMEGDIGCMVNGAGLAMATMDIIKYYGASPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+ ++V  AFKII+SD  V GIL+NIFGGIMRCD++ KGI++A K++ + +PLV+
Sbjct: 291 DVGGGANLEQVTNAFKIISSDKHVTGILVNIFGGIMRCDIIAKGIVAAAKDIGLTMPLVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G N   G ++I +SGLN++TA +L DAAQKIV   +
Sbjct: 351 RLSGTNYSAGMKIIEDSGLNIVTASELGDAAQKIVKLTR 389


>gi|209551256|ref|YP_002283173.1| succinyl-CoA synthetase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226734978|sp|B5ZSR9|SUCC_RHILW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|209537012|gb|ACI56947.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 397

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 256/397 (64%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  A +A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAAAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIEEVVAHAKEMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++   L+L 
Sbjct: 121 SILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKALQLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+MK+G LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKSLFPALYKAFNEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVK 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 TLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|320529609|ref|ZP_08030689.1| succinate-CoA ligase, beta subunit [Selenomonas artemidis F0399]
 gi|320138102|gb|EFW30004.1| succinate-CoA ligase, beta subunit [Selenomonas artemidis F0399]
          Length = 396

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 180/401 (44%), Positives = 257/401 (64%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR+Y V V  G+   +V AA    + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREYGVKVPNGLPAFTVDAAVDNAEKLGSPVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    RE+LG TL+T QTGP G  VN + +E+G+ I +E YL
Sbjct: 58  -------GGVKIAKTTDEVRRYARELLGKTLVTHQTGPEGKVVNRLLIEEGSKIKKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  +  + S +GG++IE+VA+++P+KI K  IDP++G+       +   + + 
Sbjct: 111 SFVIDRLSASIVMMGSEEGGVEIEKVAEEHPEKIIKEYIDPVVGLMPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L  NLY AF  KD S +EINPL++ ++  +  LD+K++FDD+ALYRH DI 
Sbjct: 171 APAVRKASKLMQNLYAAFIGKDCSQVEINPLVVTEDDDVIALDAKLNFDDSALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA  H L+Y+ L G++ CMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 231 ELRDDSEEDPKELEASAHGLNYVNLGGDVACMVNGAGLAMATVDMLKHCGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSAPEKIATAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKLISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  VD G  ++  + + NV  A ++++ A++IV  V
Sbjct: 351 VVRLEGTKVDEGREILKNTPIGNVFAAPNMEEGAKQIVELV 391


>gi|30249768|ref|NP_841838.1| succinyl-CoA synthetase subunit beta [Nitrosomonas europaea ATCC
           19718]
 gi|30180805|emb|CAD85721.1| ATP-citrate lyase/succinyl-CoA ligases:ATP-grasp domain
           [Nitrosomonas europaea ATCC 19718]
          Length = 390

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 179/394 (45%), Positives = 259/394 (65%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L +Y + +A+G +  +V  A    + + G ++VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILAEYGIKLAEGGLAHTVEEAVQRSREIDGNVWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + + +      +LG  L+T QTGP G   + +Y+E G +I RE+YL
Sbjct: 58  -------GGVKVCRTHEEIEVAAESLLGKKLVTHQTGPAGKLCSRLYIEAGTEIAREVYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR+   +  + S QGGMDIE +A   P  I K+ I+P +G+      ++   L L+
Sbjct: 111 AFMIDRSHERIVMVGSAQGGMDIETLAATNPDAIKKIHIEPAVGLQDFQARTMAFALGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+A  D D ++LEINPL++ +N  L  LD+K+SFD+NAL+R   I 
Sbjct: 171 DVLLNHAVKTIRGCYRAMRDLDANILEINPLVVTRNNELIALDAKMSFDENALFRRHRIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ DSREI A +  LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDNSQIDSREIAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D++VK +L+NIF GI RCD + +G++ AV+ + + +PLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADNNVKAMLVNIFAGINRCDWIAEGVVQAVRNIGMTVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G R+IA+SGL +ITA  L DAA+K+VHA
Sbjct: 351 GTNVEEGRRIIADSGLPIITAETLADAAEKVVHA 384


>gi|313214028|emb|CBY40807.1| unnamed protein product [Oikopleura dioica]
 gi|313229191|emb|CBY23776.1| unnamed protein product [Oikopleura dioica]
          Length = 420

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 181/400 (45%), Positives = 250/400 (62%), Gaps = 12/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL +Y V   +G + +S   A    K LP P  VVK+Q+ AGGRG     
Sbjct: 15  LSIHEYMSFNLLNQYGVKTPEGHMATSPEQAFDIAKNLPTPDCVVKAQVLAGGRG----- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +   +++GS LITKQTG  G     V+V +     RE Y 
Sbjct: 70  -----LNGGVKIVYSPEDAKALAEQMIGSDLITKQTGEQGRPCEKVFVVERRYPRREYYF 124

Query: 121 SLLVDRTSG--MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           ++ ++R +       + S  GGM+IEEVA   P+ I K  +D   G++ E    L   + 
Sbjct: 125 AITMERGATKFGPVLVGSASGGMNIEEVAATNPEAIIKEHVDIEAGLSMEQCKRLASKMG 184

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               ++ +  D F  +YK F +KD SLLEINPL     G +  +D+KI+FD+NA YR  D
Sbjct: 185 FPAYSQDEAADYFMKMYKLFKEKDCSLLEINPLAEDSTGEVLAMDAKINFDENAAYRQKD 244

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I ELRD  +ED RE+ A Q +L+YI LDGNIGC+VNGAGLAM+TMDII L+GG+PANFLD
Sbjct: 245 IFELRDWKQEDEREVIAAQSDLNYIGLDGNIGCLVNGAGLAMSTMDIISLHGGSPANFLD 304

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA  D+V  AF++ITSDS V+ IL+NIFGGIMRCDV+ +GI++A KE+ + IP+V+R
Sbjct: 305 VGGGATADQVKEAFRLITSDSKVEAILVNIFGGIMRCDVIAQGIIAAAKELDLKIPIVVR 364

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           L+G  VD    LI +SGL +++   LD+AA+  V   + V
Sbjct: 365 LQGTRVDDAKALIGQSGLKILSCDSLDEAAKMSVKMAEIV 404


>gi|262369429|ref|ZP_06062757.1| succinyl-CoA synthetase subunit beta [Acinetobacter johnsonii
           SH046]
 gi|262315497|gb|EEY96536.1| succinyl-CoA synthetase subunit beta [Acinetobacter johnsonii
           SH046]
          Length = 388

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 276/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +GV+ ++   A  A + + G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGVLATTPEEAVKAFEQIGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S        + I+G+ L+T QT   G  VN V V +    + RELY
Sbjct: 58  -------GGVKVVKSATEAAEYAKSIIGTNLVTYQTDSHGQPVNSVLVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLLPFQAREVAFKLNL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +         +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR  +I
Sbjct: 171 KDGQVNQFVKVMSAAYQAFIENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKDRVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+KIV AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKIVAAVK 387


>gi|254456078|ref|ZP_05069507.1| succinyl-CoA synthetase beta chain [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083080|gb|EDZ60506.1| succinyl-CoA synthetase beta chain [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 386

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/396 (51%), Positives = 277/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY   V +GV   +V       K+L    YV+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGAVVPEGVFSLTVEDLVEKAKSLNTKKYVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +++ +    +E++G  L+T QTGP G  V  +YVE+ ++I +E YL
Sbjct: 58  -------GGVKILDTIEDLSEAAKEMMGKILVTHQTGPEGREVKRLYVEESSNIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  +AFI+S QGGMDIEEVA + P+KI    +D    ++ +D   +  +  L 
Sbjct: 111 SCLVDRASSKIAFISSDQGGMDIEEVASNLPEKIITTKVDIGNEISDKDCEEIIKIFNLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+I    L  ++Y+ F   D +++E+NPLI+ K  ++  LD+K++FD NAL+RH +I 
Sbjct: 171 DSAKIQAISLIKSIYQMFISTDANMVEVNPLILTKEEKVICLDAKVNFDSNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  EIEA +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLNEEDPTEIEASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGKEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AA KII SD +VKGILINIFGGIMRCDVL +G++ A KE+ I++PLV+RL 
Sbjct: 291 GGASKEKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  SGL +I+A +LDDAA+KIV A+K
Sbjct: 351 GTNFKEGKEILDNSGLKLISAENLDDAAKKIVEAIK 386


>gi|91762632|ref|ZP_01264597.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91718434|gb|EAS85084.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 386

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/396 (51%), Positives = 275/396 (69%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY   V +GV   +V       K+L    +V+K+QIHAGGRGK    
Sbjct: 1   MNIHEHQAKQILKKYGAVVPEGVFAFTVDELIEKAKSLKTEKFVLKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +++  +    +E+LG TL+T QTGP G  V  +YVE+ ++I +E YL
Sbjct: 58  -------GGVKILNTIDELSVAAKELLGKTLVTHQTGPAGREVKRLYVEESSNIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S  + FI+S QGGMDIEEVA+  P+KI    ID    ++  D   +  +  L 
Sbjct: 111 SCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+     L  ++YK F   D +++E+NPLI+ K  ++  LD+K++FD NAL+RH +I 
Sbjct: 171 DDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  EI+A +H+L+YI LDG+IGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 ELRDLNEEDPAEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KV+AA KII SD +VKGILINIFGGIMRCDVL +G++ A KE+ I++PLV+RL 
Sbjct: 291 GGASKEKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  SGL +I+A +LDDAA+KIV A+K
Sbjct: 351 GTNFKEGKEILDNSGLKLISAENLDDAAKKIVKAIK 386


>gi|224370324|ref|YP_002604488.1| succinyl-CoA synthetase subunit beta [Desulfobacterium
           autotrophicum HRM2]
 gi|259511779|sp|C0QLM0|SUCC_DESAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|223693041|gb|ACN16324.1| SucC1 [Desulfobacterium autotrophicum HRM2]
          Length = 385

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 197/395 (49%), Positives = 253/395 (64%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKAL R + VPV  G V  SV  A    + L G   VVK+QIHA         
Sbjct: 1   MKIHEYQAKALFRTFGVPVPDGGVAFSVEEAVDVARGLGGYPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S +       EILG TL+T QTGP G  V  + VE G  I +ELYL
Sbjct: 52  -GGRGKGGGVKLAASEEEARRFAGEILGMTLVTHQTGPQGREVKKLLVEAGQKIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  +  +AS +GGMDIE VA   P+KI K+ +DPL G+    +  +   L L 
Sbjct: 111 SILVDRATAGIVIMASQEGGMDIETVAAKTPEKIIKVRVDPLTGIQGYYLRQVGFGLGLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   L  NLY  F   D SLLEINPLI+  + R+  LD+K+  D NAL+RH D+ 
Sbjct: 171 KAALKEFSALLKNLYTLFVKNDCSLLEINPLILTSDDRVMALDAKVDIDSNALFRHKDLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED  E+EA + NL+YI LDGN+G +VNGAGLAMATMDIIK  G  PANF+DVG
Sbjct: 231 ELRDLDEEDPLEVEASKFNLNYINLDGNVGNIVNGAGLAMATMDIIKNAGAEPANFMDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF II  D  VK +LINIFGGI+RCDV  +GI++A K+  I IP+V+R+E
Sbjct: 291 GGATAEMVENAFSIILRDKKVKAVLINIFGGILRCDVFAEGIVTAAKKSGITIPVVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G  ++A+SGLN+I A++L DAA+K+  A+
Sbjct: 351 GTNVERGKEILAQSGLNLINAVNLKDAAEKVAAAI 385


>gi|268590346|ref|ZP_06124567.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rettgeri DSM 1131]
 gi|291314256|gb|EFE54709.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rettgeri DSM 1131]
          Length = 388

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 192/386 (49%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SSV     A K +    +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGMPAPTGYACSSVAETVDAAKKIGNGPWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S +  V +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVTSDINEVKAFAEHWLGKNLVTYQTDANGQPVNQILVETATDIDKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPMPFQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L EINPL+I   G L  LD K+  D NALYR  +I+
Sbjct: 171 GKQVSQFAKIFMGLATLFLERDLALAEINPLVISTAGDLVCLDGKLGIDSNALYRQPEIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 ELRDESQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDENVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAANSLTD 376


>gi|317050499|ref|YP_004111615.1| succinyl-CoA synthetase subunit beta [Desulfurispirillum indicum
           S5]
 gi|316945583|gb|ADU65059.1| succinyl-CoA synthetase, beta subunit [Desulfurispirillum indicum
           S5]
          Length = 389

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 257/397 (64%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K L  +Y +PV KG V  +   AE   ++L G   VVK QIHAG RG     
Sbjct: 1   MNIHEYQGKELFEQYGIPVPKGKVAYTNWQAEDITRSLGG-KSVVKVQIHAGNRG----- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                + GGV++ SS K           + + T QTG    +V  + VE+   I +E YL
Sbjct: 55  -----ASGGVKLVSSSKEAKDLAEHFFNTPIKTAQTGGKSKQVRRILVEEQRVINKEFYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR    +A IAST+GG++IEEVA+ +P+KI    I+  IG+    +  L   L L 
Sbjct: 110 SMIVDREERRIAIIASTEGGVNIEEVAEQHPEKILMEHIELSIGILDFQIRKLAFSLGLA 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LYK F +KD S +EINPLI+  +G L  LD+K++FD+NAL RH +I 
Sbjct: 170 GEQIRQFSTIVKGLYKLFTEKDCSQIEINPLIVTDDGSLLALDAKVNFDENALMRHPEIL 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED  E+EA ++NLSYIALDG IGCMVNGAGLAMATMDII+ YGG PANFLDVG
Sbjct: 230 ELRDFAEEDPLEVEASRYNLSYIALDGTIGCMVNGAGLAMATMDIIQHYGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +KV+ AF II  D  VK IL+NIFGGIM+CD++ +G++ A K + + +P+++RL 
Sbjct: 290 GGANTEKVSNAFSIILRDEKVKAILVNIFGGIMKCDIIAQGVVEAAKTMDVKVPIIIRLA 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N++ G ++I +SG N+I A  L++AA+  V   +G
Sbjct: 350 GTNLEEGMKVIEQSGQNLIVAKTLEEAAKLAVEKARG 386


>gi|238880090|gb|EEQ43728.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 415

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 167/395 (42%), Positives = 236/395 (59%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y VP+ KG   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLSEYGVPIPKGYPATTPEGAYDAAKKLGTNELVIKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E Y+
Sbjct: 80  ---SGLQGGVKLISSAEEAKDLASQMLNHKLITKQTGAAGKEVTAVYIVERRDAASEAYV 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DRT      +AS QGGMDIE VA   P  I    +    GV+      +   L   
Sbjct: 137 AILMDRTRQTPVIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEGVSDSLATEIAGALGFT 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +      +LYK F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 197 QDAIPEAAKTIQSLYKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED +E EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 257 SWRDPTQEDPQEAEAGKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SD  V GI +NIFGGI+RCD + KG+++A K   ++IP+V+RL+
Sbjct: 317 GTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVVRLQ 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N+     LI  SGL +    DLD AA+KIV   
Sbjct: 377 GTNMAEAKELIDNSGLKLYAFEDLDPAAEKIVQLA 411


>gi|304311200|ref|YP_003810798.1| Succinyl-CoA synthetase, beta subunit [gamma proteobacterium HdN1]
 gi|301796933|emb|CBL45146.1| Succinyl-CoA synthetase, beta subunit [gamma proteobacterium HdN1]
          Length = 388

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 195/386 (50%), Positives = 267/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+KGV   SV AA +A K + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKKLFAQYGLPVSKGVAAQSVDAAVAAAKEIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +  + + +  R++LG+ L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKLVTDKEEIRAFARKLLGTNLVTYQTDERGQPVNTILVETCTDIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG++IE+VA D P+KI K+ IDPL+G        L   L L 
Sbjct: 111 GAVLDRGSRRVVFMASTEGGVEIEKVAHDTPEKILKVAIDPLVGAQPYQGRVLGYQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++F  L K F +KD S++E+NPL+I K G L  LD+K+  D +AL+RH D++
Sbjct: 171 SNQVKQFVNIFMGLAKIFEEKDCSIIEVNPLVITKEGNLHCLDAKVVLDGSALFRHPDME 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D ++ED RE  A Q +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 231 ALYDPTQEDERERIAAQWSLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+V+ +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVQAVLVNIFGGIVRCDLIADGIIGAVQEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N D+G + +A+SGLN+I A   +D
Sbjct: 351 GNNADLGAKKLADSGLNIIAASGFND 376


>gi|254569344|ref|XP_002491782.1| Beta subunit of succinyl-CoA ligase, which is a mitochondrial
           enzyme of the TCA cycle [Pichia pastoris GS115]
 gi|238031579|emb|CAY69502.1| Beta subunit of succinyl-CoA ligase, which is a mitochondrial
           enzyme of the TCA cycle [Pichia pastoris GS115]
 gi|328351718|emb|CCA38117.1| succinyl-CoA synthetase beta subunit [Pichia pastoris CBS 7435]
          Length = 412

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 179/396 (45%), Positives = 252/396 (63%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR Y+VPV +G    S   A    + L     V+K+Q   GGRGKG F 
Sbjct: 20  LSIHEYRSADLLRAYDVPVPRGGAADSPEEAYKIAQNLHSDGLVIKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ S+ + V     ++L   LITKQ+G  G  V+ VYV +  D + E YL
Sbjct: 80  ---SGLQGGVKLVSTPEEVRDLAGQMLQHNLITKQSGAAGKLVSAVYVVERKDAVHEAYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++LVDR S   A + S+QGGMDIE VA   P  I    ID   GVT    A +   L   
Sbjct: 137 AILVDRVSQKPAIVVSSQGGMDIEGVAAKDPSAIKTFPIDLKTGVTDSLAAEIASNLGFS 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A+++  D    LY+ F +KD + +EINPL  +    +  +D+K  FDD+AL+RH D++
Sbjct: 197 PEAQVNAQDSIKKLYQIFMEKDATQIEINPLSEVSGNEVLCMDAKFGFDDSALFRHSDVE 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E+EA +  L++I LDGNIGC+VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 257 SWRDPTQEDADEVEAGKWGLNFIKLDGNIGCLVNGAGLAMATMDIIKLYGGEPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  AF++I ++  VKGI +NIFGGI+RCD + +G+++A K + ++IP+V+RL 
Sbjct: 317 GGATPESIEKAFRLILTEDKVKGIFVNIFGGIVRCDYVAQGLIAATKSLDLSIPVVVRLN 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N+    +LI ESGL + +  DLD AA+KIV   K
Sbjct: 377 GTNLSQAEKLIEESGLKLYSFKDLDPAAEKIVELTK 412


>gi|260798917|ref|XP_002594446.1| hypothetical protein BRAFLDRAFT_208919 [Branchiostoma floridae]
 gi|229279680|gb|EEN50457.1| hypothetical protein BRAFLDRAFT_208919 [Branchiostoma floridae]
          Length = 411

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 180/398 (45%), Positives = 253/398 (63%), Gaps = 5/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRF 59
           +N+ EYQ+K LL  Y V V +  V  +   A    K L P   YV+K+QI AGGRGKG F
Sbjct: 17  LNLQEYQSKKLLDDYKVAVQRFGVADTTDQAVEVAKQLAPVREYVIKAQILAGGRGKGTF 76

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  KGGV+  +    V S ++++LG  L+TKQT P G  V  V V +  DI RE Y
Sbjct: 77  ---SNGVKGGVKFTTVPDEVGSLVKDMLGFKLVTKQTPPGGVLVQKVMVAESVDISRETY 133

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL-LIDPLIGVTSEDVASLCDMLE 178
            ++L+DR +     IAST+GGMDIEEVA+  P +I+K+  +D   G+++     L   L+
Sbjct: 134 FAILMDRETNGPVIIASTEGGMDIEEVAEKTPDRIYKVQPVDIHEGLSAAVARQLAQNLK 193

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G           N+Y+ F   D + +EINP     +GR+  +D+KI+FDDNA +R  +
Sbjct: 194 FEGDKLDQATLQIMNMYQLFLSVDATQVEINPFAETSDGRVICVDAKINFDDNAEFRQKE 253

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  L D SE D RE++A +HNL+YI +DGNIGC+VNGAGLAMATMDI+KL+GG PANFLD
Sbjct: 254 IFALDDCSETDPREVQAHKHNLNYIGMDGNIGCLVNGAGLAMATMDIVKLHGGEPANFLD 313

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGG  + +V  AFKI+TSD  VK +L+NIFGGI+ C  +  GI +A + + + IPL++R
Sbjct: 314 CGGGVTEGQVFEAFKILTSDPQVKAVLVNIFGGIVNCATIANGITAAARGIDLKIPLIVR 373

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NVD   R++ +SGL +I A  + +AA+  V++++
Sbjct: 374 LEGTNVDEAKRILKKSGLPIIPADGMGEAAKHAVNSIQ 411


>gi|77360586|ref|YP_340161.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123588173|sp|Q3IGW5|SUCC_PSEHT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|76875497|emb|CAI86718.1| succinyl-CoA synthetase, beta subunit [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 388

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 188/386 (48%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGYACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PVQMKQFVKIFMGLGKMFTDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+EDSRE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDSREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++  SGL++I A  L D
Sbjct: 351 GTNAELGREVLKNSGLDIIAAESLTD 376


>gi|321250107|ref|XP_003191692.1| succinate-CoA ligase (ADP-forming) [Cryptococcus gattii WM276]
 gi|317458159|gb|ADV19905.1| Succinate-CoA ligase (ADP-forming), putative [Cryptococcus gattii
           WM276]
          Length = 418

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 171/386 (44%), Positives = 248/386 (64%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K +   S   AES  K+      V+K+Q+ AGGRGKG F 
Sbjct: 25  LSIHEYQSVQLLNSYGIPTPKALPAFSAAEAESVAKSFGKDELVIKAQVLAGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S         ++LG  LITKQTG  G   N V + +     +E Y 
Sbjct: 85  ---SGFQGGVQMVDSPAQAKEYAEKMLGHKLITKQTGAAGRICNAVMLAERMPPQKEYYA 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DRT+G    + S+QGGM+IE+VAK+ P  I    +D   G++S +   L   L  +
Sbjct: 142 AVLNDRTTGGPVLVTSSQGGMNIEDVAKETPDAIITTPLDFDNGISSAEALELAKKLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+ +  D+F  LY  F +KD + +EINPL  + NG++  +D+K  FDDNA +R  DI 
Sbjct: 202 ENAQKNAADVFAKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQADIF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED++E+EA Q+ L++I LDG+IGC+VNGAGLAMATMD++ L+GG+PANFLDVG
Sbjct: 262 KLRDTTQEDAQEVEAAQYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  AF+++ +  +VK I +NIFGGIMRCDV+ +GI+ A KE+++ IPLV+RL+
Sbjct: 322 GGATADAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELQLEIPLVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G   +   ++I ESGL +     LD+
Sbjct: 382 GTKEEEAKKMIRESGLKIFPFDGLDE 407


>gi|183598178|ref|ZP_02959671.1| hypothetical protein PROSTU_01557 [Providencia stuartii ATCC 25827]
 gi|188020345|gb|EDU58385.1| hypothetical protein PROSTU_01557 [Providencia stuartii ATCC 25827]
          Length = 388

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 189/386 (48%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SS   A  A K +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPTGYACSSADEAVEAAKKIGNGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V S++  +     + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVTSNINDIKEFAEKWLGKNLVTYQTDANGQPVNQILVEHATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAVIDPLTGPMPFQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+E+NPL+I   G L  LD K+  D NALYR  +++
Sbjct: 171 GKQVSQFAKIFMGLATMFLERDLALIEVNPLVINTEGDLVCLDGKLGVDSNALYRQAEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SVK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDKSVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAANSLTD 376


>gi|77416577|sp|Q7UKI3|SUCC_RHOBA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|327539987|gb|EGF26584.1| succinyl-CoA synthetase (beta subunit) [Rhodopirellula baltica
           WH47]
          Length = 394

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 191/394 (48%), Positives = 262/394 (66%), Gaps = 2/394 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K L R   VPV  G ++++   A +A   L G + VVK+QIHAGGRGKG   
Sbjct: 1   MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           + P   + GV +  S +   +    +LG  L+T QTGP G  V+ V+VE G DI RELYL
Sbjct: 61  DNP--DQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       + ST+GG++IE VA++ P+ IFK   DP +G+    V  LC  L ++
Sbjct: 119 GIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIE 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A          + + F D D  + EINPL+I  +G +  LD+KI FD+NA++RH D++
Sbjct: 179 GAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITGDGEMVALDAKIIFDENAMFRHKDLE 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+SEE+  E+ AK+  LSY+ LDGNI C+VNGAGLAM+TMDIIK +GG PANFLDVG
Sbjct: 239 ELRDLSEEEESELRAKKAGLSYVKLDGNIACLVNGAGLAMSTMDIIKYHGGEPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  +V  AF+I+ SD + KG+L+NIFGGI RC  +   +++A KEV  N+PLV+RLE
Sbjct: 299 GGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCTTIAGALITASKEVGFNVPLVVRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G  V+ G +++AES +++I A+DL DAA+KIV A
Sbjct: 359 GTEVEEGRKMLAESDVDIINAMDLTDAAKKIVAA 392


>gi|242062364|ref|XP_002452471.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
 gi|241932302|gb|EES05447.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
          Length = 422

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SV   + A+K +       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVQEVKDALKNMFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +    +   S   ++LG  L+TKQTGP G  V+ VY+ +   +  E+
Sbjct: 88  FK---SGLQGGVHIVK-AEEAESIASKMLGQILVTKQTGPEGKIVSKVYLCEKLSLTNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ ID   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 LKAADRQSSIEQIKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 420


>gi|152979225|ref|YP_001344854.1| succinyl-CoA synthetase, beta subunit [Actinobacillus succinogenes
           130Z]
 gi|189046873|sp|A6VPM2|SUCC_ACTSZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|150840948|gb|ABR74919.1| succinyl-CoA synthetase, beta subunit [Actinobacillus succinogenes
           130Z]
          Length = 386

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 269/396 (67%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++PV+KG    +V  A  AI+ L G  +V K Q++AGGRGK    
Sbjct: 1   MNLHEYQSKQIFAQYDLPVSKGYPCETVEQALKAIEKLGGDQWVAKCQVYAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V SS   V S     LG  L+T QT   G  VN +Y+E  A + +ELY+
Sbjct: 58  -------GGVKVVSSEAEVRSFFERFLGKRLVTLQTDAQGQPVNTIYLEACAAVKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  + F+AST+GG++IEEVA+  P  + K+ IDP +G        L   L L 
Sbjct: 111 GMVIDRANRRIVFMASTEGGVNIEEVAEKTPHLLHKVAIDPFMGAQPFQGRELACKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F +KD+SL+EINPL+I++N  L  LD+KI  D NALYRH D++
Sbjct: 171 GKQIHQFAHIFCRLSKMFSEKDLSLVEINPLVILQNDDLHCLDAKIVVDGNALYRHADLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+ED RE EA+   L+Y+ALDGNIGCMVNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 231 SLQDPSQEDPREAEAEALGLNYVALDGNIGCMVNGAGLAMGTMDIIKLQGGLPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +++VA AFKII SD++VK IL+NIFGGI+RCD++ +GI++AV EV + +P+V+RLE
Sbjct: 291 GSATKERVAGAFKIILSDTNVKAILVNIFGGIVRCDLIAEGIVAAVNEVGVTVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G  ++A+SGLN+I A  L DAA + V+A K
Sbjct: 351 GNNAERGREILAQSGLNIIAAESLKDAAVQAVNAAK 386


>gi|332992990|gb|AEF03045.1| succinyl-CoA synthetase subunit beta [Alteromonas sp. SN2]
          Length = 388

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 181/386 (46%), Positives = 257/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L ++Y +PV++G    +  +A  A   + G  +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFKEYGLPVSEGYAADTPESAVEAANRIGGSEWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     ++ +     LG  L+T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKDTGAIKAFAENWLGKNLVTFQTDENGQPVSKILVETCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G        +   L L 
Sbjct: 111 GAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGAQPYQAREMAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D D++L+EINPL+I ++G L  LD+K++ D NALYR   ++
Sbjct: 171 GVQIKQFTKIFLGLAKMFEDLDVALIEINPLVIKEDGDLHCLDAKLAIDGNALYRQPKVK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D ++ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 AMQDPTQEDAREAHAAEFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +++P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A SGL++I A  L D
Sbjct: 351 GTNAELGREVLANSGLDIIAAESLTD 376


>gi|239608459|gb|EEQ85446.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis ER-3]
          Length = 451

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 174/405 (42%), Positives = 244/405 (60%), Gaps = 10/405 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  +   AE   K +     V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEAKMFAGQMIGHRLVTKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     ++S+QGG+DIE VAK+ P+ I    +D  +GVT E   ++   L   
Sbjct: 151 AILMDRQTQAPVIVSSSQGGVDIESVAKETPEAITTTSVDINVGVTDEMARNIAKDLGFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL       +  +D+K+ FDDNA +R  +I 
Sbjct: 211 EQCVEEAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNAEFRQKEIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+
Sbjct: 331 GGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLRTPIVARLQ 390

Query: 361 GANVDIGNRL-------IAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N+   + L       I ESGL + +  DL +AA+K V   K V
Sbjct: 391 GTNMAKAHELKTNSNVNINESGLKIFSMEDLQNAAEKSVQFSKVV 435


>gi|326928102|ref|XP_003210222.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like, partial [Meleagris gallopavo]
          Length = 460

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 164/386 (42%), Positives = 229/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  S   A  A + L     V+K+QI AGGRGKG F 
Sbjct: 66  LNLQEYQSKKLMADHGVTVQRFFVADSADDALEAAQRLKAKEIVLKAQILAGGRGKGTF- 124

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K+V    ++++G  L TKQT   G +V  V V +  +I RE Y 
Sbjct: 125 --NSGLKGGVHLTKDPKTVEQLAKQMIGYNLSTKQTPKDGVKVKKVMVAEALNISRETYF 182

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGG+DIEEVA   P+ IFK  ID   G+       +   L  +
Sbjct: 183 AILMDRACNGPVMVGSPQGGVDIEEVAATSPELIFKEEIDIFEGIQDHQALQMAKNLGFK 242

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 243 GPLQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 302

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 303 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 362

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 363 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 422

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++ ESGL + +A DL+D
Sbjct: 423 GTNVHEAQRILNESGLPITSASDLED 448


>gi|33150622|gb|AAP97189.1|AF087890_1 beta-succinyl CoA synthetase [Homo sapiens]
          Length = 403

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 171/390 (43%), Positives = 241/390 (61%), Gaps = 3/390 (0%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
             LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+   +  KG
Sbjct: 1   MELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE---SGLKG 57

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y ++ ++R+ 
Sbjct: 58  GVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSF 117

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +           
Sbjct: 118 QGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAA 177

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
           +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++E
Sbjct: 178 ENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQE 237

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           D R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V
Sbjct: 238 DERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQV 297

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
             AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD   
Sbjct: 298 TEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAK 357

Query: 369 RLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 358 ALIADSGLKILACDDLDEAARMVVKLSEIV 387


>gi|62260721|gb|AAX77927.1| unknown protein [synthetic construct]
          Length = 422

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 27  MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 84  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 137 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 197 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 257 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK ILINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 317 GGGATKERVIEAFKLILDDENVKAILINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 377 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 412


>gi|58259261|ref|XP_567043.1| succinate-CoA ligase (ADP-forming) [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134107401|ref|XP_777585.1| hypothetical protein CNBA7060 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260279|gb|EAL22938.1| hypothetical protein CNBA7060 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223180|gb|AAW41224.1| succinate-CoA ligase (ADP-forming), putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 418

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 167/386 (43%), Positives = 246/386 (63%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LL  Y +P  K +   S   AES  K+      V+K+Q+ AGGRGKG F 
Sbjct: 25  LSIHEYQSVQLLNSYGIPTPKALPAFSAAEAESVAKSFGKDELVIKAQVLAGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S         ++LG  LITKQTG  G   N V + +     +E Y 
Sbjct: 85  ---SGFQGGVQMVDSPAQAKEYAEKMLGYKLITKQTGAAGRICNAVMLAERMPPQKEYYA 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DRT+G    + S+QGGM+IE+VAK+ P  I    +D   G++  +   L   L  +
Sbjct: 142 AILNDRTTGGPVLVTSSQGGMNIEDVAKETPDAIITTPLDFDNGISHAEALELAKKLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A+ +  D+F  LY  F +KD + +EINPL  + NG++  +D+K  FDDNA +R  D+ 
Sbjct: 202 ENAQKNAADVFGKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQKDVF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED++E+EA ++ L++I LDG+IGC+VNGAGLAMATMD++ L+GG+PANFLDVG
Sbjct: 262 KLRDTTQEDAQEVEAAEYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFLDVG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF+++ +  +VK I +NIFGGIMRCDV+ +GI+ A KE+ + IPLV+RL+
Sbjct: 322 GGATAEAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELHLEIPLVVRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G   +   ++I ESGL +     LD+
Sbjct: 382 GTKEEEAKQMIRESGLKIFPFDGLDE 407


>gi|148828346|ref|YP_001293099.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae
           PittGG]
 gi|189030206|sp|A5UIW0|SUCC_HAEIG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148719588|gb|ABR00716.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae PittGG]
          Length = 394

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 193/396 (48%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVDEVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   S   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGMDIEEVA++ P  + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+F  L + F +KD+SL+E+NPL++ + G L  LD+KI+ DDNAL+RH D+ 
Sbjct: 171 DAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKIAVDDNALFRHKDLS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N +IG +++AES +N++TA  L  A +  V+A K
Sbjct: 351 GTNAEIGRQILAESDVNILTAQSLQQATELAVNAAK 386


>gi|325578255|ref|ZP_08148390.1| succinyl-CoA ligase subunit beta [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159991|gb|EGC72120.1| succinyl-CoA ligase subunit beta [Haemophilus parainfluenzae ATCC
           33392]
          Length = 388

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 268/386 (69%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L ++Y +PV++GVV  +   AE A+  L G +++ K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFKQYALPVSEGVVCKTADEAEMALFQLNGDVWIAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +   + LG  L+T QT   G  VN +Y+E+   I +ELYL
Sbjct: 58  -------GGVQLVHNAEEARAFADKWLGQHLVTFQTDKKGQPVNSIYIEETCQIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS+ GGM IE+VA++ P+ I K+ I+PL+G        L   L L 
Sbjct: 111 GAVIDRASQKVVFMASSAGGMSIEDVARETPELIHKVTIEPLVGGMPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      ++F  L K F +KD SL+E+NPL++ K G L  +D+K+S DDN+LYRH D+ 
Sbjct: 171 GEQNKQFAEIFVKLAKLFIEKDFSLVEVNPLVVTKEGNLICVDAKVSIDDNSLYRHPDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+S+ D+RE EA+++ L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALRDLSQSDAREAEAEKYQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D +VK +L+NIFGGI+RCD++ +G+++A++EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDKNVKSVLVNIFGGIVRCDLIAEGVVAAIQEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  ++AESG+N+I A  L +
Sbjct: 351 GTNAPQGRAILAESGMNLIAAHSLQE 376


>gi|226500228|ref|NP_001151193.1| succinyl-CoA ligase beta-chain [Zea mays]
 gi|194701268|gb|ACF84718.1| unknown [Zea mays]
 gi|195644938|gb|ACG41937.1| succinyl-CoA ligase beta-chain [Zea mays]
          Length = 422

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SVH  + A+K +       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVHEVKDALKNMFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +    +       ++LG  LITKQTGP G  V+ VY+ +   +  E+
Sbjct: 88  FK---SGLQGGVHIVK-AEEAELIASKMLGQILITKQTGPEGKIVSKVYLCEKLSLTNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ ID   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 LKAADRQSSIEQIKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 420


>gi|86359471|ref|YP_471363.1| succinyl-CoA synthetase subunit beta [Rhizobium etli CFN 42]
 gi|123510555|sp|Q2K3F0|SUCC_RHIEC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|86283573|gb|ABC92636.1| succinyl-CoA synthetase beta subunit protein [Rhizobium etli CFN
           42]
          Length = 397

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 259/397 (65%), Positives = 325/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I     AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V+++ +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIEDVVANAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIDRELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L+
Sbjct: 121 SLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISAALKLE 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LY+AF +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKSLFPLLYRAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|238508772|ref|XP_002385570.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
 gi|220688462|gb|EED44815.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
          Length = 491

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 173/385 (44%), Positives = 241/385 (62%), Gaps = 3/385 (0%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +Y V + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F       KGGVRV 
Sbjct: 94  QYGVGMPKGEVAYSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDN---GLKGGVRVI 150

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S         +++G  LITKQTG  G   N VY+ +     RE YL++L+DR S     
Sbjct: 151 YSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRQSQSPVI 210

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPN 193
           +AS+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L    Q   +  D    
Sbjct: 211 VASSQGGMDIEAVAKETPEAIITTPIDIKVGVTDEIAGKIATELGFSEQCIPEAKDTIQK 270

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++   RD ++ED+ E+
Sbjct: 271 LYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQKEVFSWRDTTQEDADEV 330

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           +A +H L++I LDG+IGC+VNGAGLAMATMDIIKL GG PANFLDVGGGA    + +AF+
Sbjct: 331 KAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFLDVGGGATPAAIKSAFE 390

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           +ITSD  V  I +NIFGGI+RCD + +G+++ V E+ +  P+V RL+G N++  ++L+ E
Sbjct: 391 LITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVNEMGLRTPIVARLQGTNMEQAHKLLNE 450

Query: 374 SGLNVITAIDLDDAAQKIVHAVKGV 398
           SGL + +  DL +AA+K V   K V
Sbjct: 451 SGLKIFSIEDLQNAAEKSVQFSKVV 475


>gi|332535008|ref|ZP_08410824.1| succinyl-CoA ligase [ADP-forming] beta chain [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035575|gb|EGI72068.1| succinyl-CoA ligase [ADP-forming] beta chain [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 388

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 186/386 (48%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSQGFACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PVQMKQFVKIFMGLGNMFTDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++  SGL++I A  L D
Sbjct: 351 GTNAELGREVLKNSGLDIIAAESLTD 376


>gi|82702208|ref|YP_411774.1| succinyl-CoA synthetase subunit beta [Nitrosospira multiformis ATCC
           25196]
 gi|82410273|gb|ABB74382.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosospira
           multiformis ATCC 25196]
          Length = 396

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 182/397 (45%), Positives = 258/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L +Y V +A+G +  ++  +    + + G ++VVK+QIH+GGRGK    
Sbjct: 1   MDIHEYQAKEILMRYGVKIAEGGLAYTIEESVQRAREIDGNVWVVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  +   V +   E+LG  L+T+QTG  G     VYVE G  I RE+YL
Sbjct: 58  -------GGIKVCRTHDEVRAASEELLGKILVTRQTGAVGKVCTRVYVEAGTHIAREMYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR+S  +  I S QGGM+IEE+A   PQ I K+ I+P +G+       +   L ++
Sbjct: 111 CFLIDRSSERIVMIGSGQGGMEIEELAHTNPQAIKKIFIEPAVGLQDFQAREMAFALGVE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+A  D D +++EINPL+I  +G L  LD+K+SFD+NAL+R  ++ 
Sbjct: 171 AAQLPHAVKTIRGCYRALRDLDANMVEINPLVITGSGELLALDAKMSFDENALFRRHEVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ D RE+ A  H LSYI L+G+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDKTQADPREVAASDHGLSYIGLNGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D  VK +L+NIF GI RCD + +G++ AV+ + + IPLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADKGVKAMLVNIFAGINRCDWIAQGVVQAVRNIDMKIPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G R+IAESGL +ITA  L +AA+K+V A  G
Sbjct: 351 GTNVEEGQRIIAESGLPIITAGTLAEAAEKVVQARNG 387


>gi|167624409|ref|YP_001674703.1| succinyl-CoA synthetase subunit beta [Shewanella halifaxensis
           HAW-EB4]
 gi|189081802|sp|B0TJP8|SUCC_SHEHH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167354431|gb|ABZ77044.1| succinyl-CoA synthetase, beta subunit [Shewanella halifaxensis
           HAW-EB4]
          Length = 388

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKAL  +Y +PV++G    +   A  A   + G ++VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALFAEYGLPVSEGFACDTAQEAVEAAGHIGGDMWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + + +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRATRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G +  LD KI  D NAL+R   I+
Sbjct: 171 PTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S++D+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 DMHDPSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A SGL++I A  L D
Sbjct: 351 GTNANLGRDVLASSGLDIIAAESLTD 376


>gi|156548216|ref|XP_001608018.1| PREDICTED: similar to succinyl-coa synthetase beta chain [Nasonia
           vitripennis]
          Length = 441

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 184/397 (46%), Positives = 257/397 (64%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLR   V V    ++  +    +A++TL    YVVK+Q+ AGGRGKG F 
Sbjct: 31  LNLLEYQSKELLRDSGVSVQNFAIVDDLQKTPNALETLHAEEYVVKAQVLAGGRGKGWFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++    K+V   ++ +LG  LITKQT   G  V  + + +  DI RE Y+
Sbjct: 91  N---GFKGGVKITKDKKAVAEYVKSMLGHRLITKQTSKDGILVQKIMIAESVDITRETYV 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR+      IAS  GGMDIE VA+  P++I  + +D   G+  E    + + L  +
Sbjct: 148 CILMDRSHNGPVLIASPAGGMDIEAVAEKTPEQIKTIPLDIYTGIDDEIAKEVAEFLGFK 207

Query: 181 GQARID-GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +           NL+K F D D   +EINPL+  K+G +  +D+KISFDDNA +R  DI
Sbjct: 208 EEKLKQKAVYELKNLWKLFVDIDALQVEINPLVETKDGEVVAVDAKISFDDNAEFRQKDI 267

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +L D SE+D RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 268 FDLEDTSEKDPREVDASKFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGTPANFLDV 327

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   +D+V  AF+I+T D  V+ IL+N+FGGI+ C  + KGI+SA + + + IPLV+RL
Sbjct: 328 GGSVKEDQVYQAFRILTEDPKVQSILVNVFGGIVNCATIAKGIVSAARNLGLKIPLVVRL 387

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG NV+   ++IAESGL ++TA DLD+AA+K V ++K
Sbjct: 388 EGTNVNEAKKIIAESGLPILTANDLDEAAKKAVASIK 424


>gi|226510248|ref|NP_001150653.1| succinyl-CoA ligase beta-chain [Zea mays]
 gi|195640872|gb|ACG39904.1| succinyl-CoA ligase beta-chain [Zea mays]
 gi|223975143|gb|ACN31759.1| unknown [Zea mays]
          Length = 422

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SV     A+K +       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVQEVNDALKNMFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +    +   S  R++LG  L+TKQTGP G  V+ VY+ +   +  E+
Sbjct: 88  FK---SGLQGGVHIVK-AEEAESIARKMLGQILVTKQTGPEGKIVSKVYLCEKLSLTNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ +D   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPVDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 LKSADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 420


>gi|261343502|ref|ZP_05971147.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rustigianii DSM 4541]
 gi|282568648|gb|EFB74183.1| succinyl-CoA ligase [ADP-forming] subunit beta [Providencia
           rustigianii DSM 4541]
          Length = 388

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 187/386 (48%), Positives = 254/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SSV  A +A K +    +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPTGYACSSVEEAVAAAKKIGNGPWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   +  +     + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVTKDINDISEFAEKWLGKNLVTYQTDANGQPVNQILVESATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K  IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLTGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+E+NPL+I   G L  LD K+  D NALYR  +++
Sbjct: 171 GKQVSQFAKIFMGLATMFLERDLALIEVNPLVINTEGDLICLDGKLGVDSNALYRQAEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG+PANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SVK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDKSVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAANSLTD 376


>gi|126731207|ref|ZP_01747015.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
 gi|126708509|gb|EBA07567.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
          Length = 393

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 170/385 (44%), Positives = 241/385 (62%), Gaps = 11/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG-PLYVVKSQIHAGGRGKGRF 59
           M+IHE+QAK +L+ + VPV KG V  S   A    + L G   +VVK+Q+H+GGRG+   
Sbjct: 1   MDIHEHQAKDILKGFGVPVPKGFVAYSPEQAAYCARALGGAGPWVVKAQVHSGGRGEA-- 58

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV++  +   V+     +LG+ L+TKQT   G  V  +YVE+ +DI +ELY
Sbjct: 59  --------GGVKLCKTDAEVMDYAASLLGTRLVTKQTDAQGKGVYRLYVEEASDIAQELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  ++DR S  +  +AS  GGM+IE++A + P  + + +IDP +G+       L   L L
Sbjct: 111 LGFVLDRKSERIMIVASGHGGMEIEDLAHEDPDSLVRSVIDPAVGLREYQARDLGFRLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G             Y+A+ D D  ++EINPL+I   G L  LD+K+SFD NALYR   +
Sbjct: 171 TGPQVTQFVTFLQACYRAYRDLDAMMVEINPLVITGKGDLVALDAKMSFDTNALYRRPQV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD  +ED RE  A  + L+Y+ LDG+IGC++NGAGLAMA+MD+I+L GG PANFLD+
Sbjct: 231 AALRDPGQEDPREAMAADNGLAYVGLDGDIGCIINGAGLAMASMDMIQLAGGQPANFLDI 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V  AF+ + SD +V  IL+NIF GI RCD + KG++ A  +V I IP+V+RL
Sbjct: 291 GGGASPERVCQAFRTVLSDRNVSVILVNIFAGINRCDWIAKGVIRAYTDVGIEIPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDL 384
            G NV+ G ++I ESGL +I+A  L
Sbjct: 351 SGTNVEEGRKIIRESGLPIISADTL 375


>gi|327188904|gb|EGE56096.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli
           CNPAF512]
          Length = 397

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 258/397 (64%), Positives = 324/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I     AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V+++++++LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIEDVVANVKDMLGNTLVTAQTGEAGKQVNRLYIEDGADIDRELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L 
Sbjct: 121 SLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISSALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   L P LYKAF +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAAEDAKSLLPLLYKAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|190893738|ref|YP_001980280.1| succinyl-CoA synthetase, beta subunit [Rhizobium etli CIAT 652]
 gi|226734977|sp|B3PQ90|SUCC_RHIE6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|190699017|gb|ACE93102.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli CIAT
           652]
          Length = 397

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 260/397 (65%), Positives = 325/397 (81%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I     AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKAEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S++ V+++++E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSVEDVVANVKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIERELYC 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L 
Sbjct: 121 SLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISSALKLD 180

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++
Sbjct: 181 GAAGEDAKSLFPLLYKAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVR 240

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD +EED++EIEA + +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVG
Sbjct: 241 ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG 300

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVAAAFKIIT+D  V+GIL+NIFGGIM+CDV+ +G+++AVKEV + +PLV+RLE
Sbjct: 301 GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLE 360

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G +++ ESGL +  A DLDDAA+KIV A+ G
Sbjct: 361 GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING 397


>gi|262371937|ref|ZP_06065216.1| succinyl-CoA synthetase subunit beta [Acinetobacter junii SH205]
 gi|262311962|gb|EEY93047.1| succinyl-CoA synthetase subunit beta [Acinetobacter junii SH205]
          Length = 388

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 280/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V +    + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR  ++
Sbjct: 171 KDKQIGQFVKIMSAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPEV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+KIV AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKIVAAVK 387


>gi|6321683|ref|NP_011760.1| Lsc2p [Saccharomyces cerevisiae S288c]
 gi|1711580|sp|P53312|SUCB_YEAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|1323442|emb|CAA97273.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|151943518|gb|EDN61829.1| ligase of succinyl-coa [Saccharomyces cerevisiae YJM789]
 gi|256272655|gb|EEU07632.1| Lsc2p [Saccharomyces cerevisiae JAY291]
 gi|285812435|tpg|DAA08335.1| TPA: Lsc2p [Saccharomyces cerevisiae S288c]
 gi|323354891|gb|EGA86724.1| Lsc2p [Saccharomyces cerevisiae VL3]
          Length = 427

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 162/399 (40%), Positives = 239/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 426


>gi|212712443|ref|ZP_03320571.1| hypothetical protein PROVALCAL_03537 [Providencia alcalifaciens DSM
           30120]
 gi|212684900|gb|EEB44428.1| hypothetical protein PROVALCAL_03537 [Providencia alcalifaciens DSM
           30120]
          Length = 388

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 187/386 (48%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   SSV  A +A K +    +V+K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFTRYGLPAPTGYACSSVEEAVAAAKKIGNGPWVIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V   +  +     + LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVTKDINDIREFAEKWLGKNLVTYQTDANGQPVNQILVESATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  V F+AST+GG++IE+VA++ P+ I K +IDPL G        L   L L 
Sbjct: 111 GAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAVIDPLTGPMPYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L   F ++D++L+E+NPL+I   G L  LD K+  D NALYR  +++
Sbjct: 171 GKQVSQFAKIFMGLATMFLERDLALIEVNPLVINTEGDLVCLDGKLGVDSNALYRQAEMR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE +A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GGAPANFLDVG
Sbjct: 231 EMHDPSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD SVK + +NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDKSVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G + +A+SGLN+I A  L D
Sbjct: 351 GNNAELGAKKLADSGLNIIAANSLTD 376


>gi|50287783|ref|XP_446321.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525628|emb|CAG59245.1| unnamed protein product [Candida glabrata]
          Length = 419

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 167/398 (41%), Positives = 239/398 (60%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLRKY V   +G+   +   A  A + L     V+K+Q   GGRGKG F 
Sbjct: 23  LSIHEYRSAELLRKYGVGTPRGLPAMTPEEAAKAAEQLGTDKLVIKAQALTGGRGKGHFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV + SS +      +E+L   LITKQTG  G  V+ VY+ +  +   E YL
Sbjct: 83  ---TGFKSGVHMISSPQEASKLAKEMLQHKLITKQTGEKGKLVSAVYIAERVETKHEAYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +G    I S++GGM+IEEVA+  P  I K  I    G+  E    + + L   
Sbjct: 140 SILMDRATGKPMIICSSEGGMNIEEVAEKNPDAIKKFSITVSEGLKPETAREIAESLGFS 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A  D  D    LYK F + D + +EINPL      K+ ++   D+K  FDDNA ++  
Sbjct: 200 ADAIDDAQDAVSKLYKIFSETDATQVEINPLSEIANNKDHKVMCTDAKFGFDDNAFFKQE 259

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I   RD+++ED  E+ AK++ L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 260 EIFSWRDLTQEDPDEVSAKKYELNFVKLFGNIGCLVNGAGLAMATMDVIKLNGGEPANFL 319

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+  V  I +NIFGGI+RCD +  G++ A KE+ + IP+V 
Sbjct: 320 DCGGGATPETIKEGFRLIMSNDKVDAIFVNIFGGIVRCDFVALGLVEAAKELGLRIPIVA 379

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL+G N+D G ++I +SGL + +  +LD AA+K+V   
Sbjct: 380 RLQGTNLDEGRQIIKDSGLKIYSFDELDPAAKKVVELA 417


>gi|260796003|ref|XP_002592994.1| hypothetical protein BRAFLDRAFT_117780 [Branchiostoma floridae]
 gi|229278218|gb|EEN49005.1| hypothetical protein BRAFLDRAFT_117780 [Branchiostoma floridae]
          Length = 450

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 174/395 (44%), Positives = 254/395 (64%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LLR   V   +G V  +   A    K L G   V+K+Q+ AGGRGKG F 
Sbjct: 39  LSLHEYHSLQLLRDAGVVTPRGEVARTPEEAFELAKKLGGEDVVIKAQVLAGGRGKGSFD 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +       ++LG  + TKQTG  G   N V + +     RE Y 
Sbjct: 99  ---SGLKGGVKIVFSAEECKDIATKMLGHKIFTKQTGEAGRICNEVLLVERLYPRREFYF 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G  A +AS+QGG++IEE+A++YP  I K  ID + G++ +    +   +  Q
Sbjct: 156 AIVMERAYGGPAIVASSQGGVNIEEIAEEYPDAIIKEGIDIVEGLSIDQARGVAAKMNFQ 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + + +  ++   +Y+ F   D +++EINP+    NG++  +D+K+ FDDNA YR  DI 
Sbjct: 216 KELQEEAAEMMVKIYEMFSRTDATMVEINPMSEDSNGKVYCMDAKVRFDDNAEYRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED R+I+A + +L+YI LDGNIGC+VNGAGLAMATMDIIKL+GG+PANFLDVG
Sbjct: 276 ALRDWSQEDERDIQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGSPANFLDVG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFK+ITSD +V+ I++NIFGGIMRCDV+ +GI+ A  E+ + +P+V+RL+
Sbjct: 336 GGATAAQVTEAFKLITSDPNVQAIMVNIFGGIMRCDVIAQGIIEAATELDLKVPIVVRLQ 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  VD    LIA SGL ++   +LDDAA+  V   
Sbjct: 396 GTQVDDAKALIAASGLRILACDNLDDAAKMAVRLS 430


>gi|241997698|ref|XP_002433498.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
 gi|215490921|gb|EEC00562.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
          Length = 422

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 176/396 (44%), Positives = 248/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+K L+    V V +  V  ++  A+   KTL    +V+K+QI AGGRGKG F 
Sbjct: 30  LNLHEYQSKQLMANNGVTVQRFKVAGNMLEAQEISKTLNVEEFVIKAQILAGGRGKGTF- 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++      V   + ++LG  L+TKQT   G  VN   + +  DI RE YL
Sbjct: 89  --SSGLRGGVKLTKDPAQVSELVEKMLGYKLVTKQTPKEGVLVNKARISEAMDIARETYL 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      +AS  GG+DIE+VA+  PQ IFK  I    G+T E   ++   L  +
Sbjct: 147 AILMDRSFNGPVIVASPAGGVDIEDVAEKTPQLIFKEPISIQEGITDEQAKTVAKNLNFK 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       +   +LY  F   D + +E+NP     +GR+   D+KI+FDDNA +R  DI 
Sbjct: 207 GPLLDQAAEQIKHLYNLFIKVDATQVEVNPFGETPDGRVVCFDAKINFDDNAAFRQRDIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              DVSE D RE+EA +++L+YI +DGNI C+VNGAGLAMATMDII+L+GG+PANFLDVG
Sbjct: 267 AQEDVSESDPREVEAARNHLNYIGMDGNIACLVNGAGLAMATMDIIQLHGGSPANFLDVG 326

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AFKI+T D  VK +L+NIFGGI+ C  +  GI SA + + + +PLV+RLE
Sbjct: 327 GSVQEDQVTQAFKILTEDPKVKAVLVNIFGGIVNCATIANGITSACRTINLKVPLVVRLE 386

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD    ++  SGL +  A DL+DAA+K V ++K
Sbjct: 387 GTNVDEARLILKNSGLAITPASDLEDAARKAVASLK 422


>gi|293392046|ref|ZP_06636380.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952580|gb|EFE02699.1| seryl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 389

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 266/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++P+ +G+   +   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFAEYDLPICRGIACKTADEAAEAIKQLKGDVWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   + LG  L+T QT   G  +N +YVE+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFADKWLGQRLVTFQTDANGQPINIIYVEETVNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS  GGMDIEEVA   P+ + K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRASQKVVFMASAAGGMDIEEVAAKTPELLHKVALDPLVGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F ++D+SLLEINPL++ K G+L  LD+KI  D NALYR LD+ 
Sbjct: 171 GDQINQFTHIFTQLAKMFVERDLSLLEINPLVVTKEGKLSCLDAKIVVDSNALYRQLDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+++ D+RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 TMHDITQSDAREALAELHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV +V +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNQVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAPLGREILANSGLNIIAAKTLTDAAVESVKAANG 387


>gi|293610893|ref|ZP_06693192.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826545|gb|EFF84911.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 388

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 279/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V +    + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQINQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|254512833|ref|ZP_05124899.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
 gi|221532832|gb|EEE35827.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
          Length = 379

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 243/376 (64%), Positives = 306/376 (81%)

Query: 22  GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           GV I+S+  AE+AI  LPGP++VVKSQIHAGGRGKG+FKELP D+KGGVRV  S +  + 
Sbjct: 4   GVPITSLDEAEAAINALPGPVWVVKSQIHAGGRGKGKFKELPEDAKGGVRVSFSPEEAMD 63

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGM 141
           +I+E+ G+TL+TKQTGP+G +VN +Y+E GA I RELYLSLLV+R +GM +F+AST+GGM
Sbjct: 64  NIKEMFGNTLVTKQTGPSGKQVNRLYIESGAAIDRELYLSLLVNRETGMTSFVASTEGGM 123

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           DIE VA++ P  I  + I P  G T +D A L D L+L G A+    +LF NLY AF +K
Sbjct: 124 DIETVAEETPDLIHTVDITPSQGCTDQDAAKLADALKLDGTAKTQAVELFKNLYTAFAEK 183

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           DMSLLEINPLI+ ++  ++VLD+K+SFD+NAL+RH D+QELRD++EED +EI+A +++LS
Sbjct: 184 DMSLLEINPLIVTESNDMQVLDAKVSFDNNALFRHSDVQELRDLTEEDEKEIQASKYDLS 243

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVGGGA  +KV  AFKIIT+D +V
Sbjct: 244 YIALDGEIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATTEKVTEAFKIITADPNV 303

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
           KGIL+NIFGGIMRCDV+ +G++ AVK+V + +PLV+RLEG  V+ G ++I ESGLNVI A
Sbjct: 304 KGILVNIFGGIMRCDVIAEGVVEAVKQVGLPVPLVVRLEGTKVNEGKKIINESGLNVIAA 363

Query: 382 IDLDDAAQKIVHAVKG 397
            DLDDAAQKIV AVKG
Sbjct: 364 DDLDDAAQKIVKAVKG 379


>gi|167855519|ref|ZP_02478282.1| seryl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853385|gb|EDS24636.1| seryl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 388

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +  KY +PV++G+   +   A  AIK L G  + +K Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQIFAKYKLPVSQGIACKTADEAVEAIKQLKGDAWAIKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V     + LG  L+T QT   G  VN +YVE+ A I RELYL
Sbjct: 58  -------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYVEETAGIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR+S  V F+AS+ GGM+IEEVA   P+ + K+ IDPL+G  +     L   L L 
Sbjct: 111 GAVIDRSSQKVVFMASSAGGMNIEEVAAKTPELLHKVAIDPLVGGMAYQGRELAFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F    K F +KD+SLLEINPL++   G L  LD+K+  D NALYR  ++ 
Sbjct: 171 GDQIKQFSFIFTQQAKLFVEKDLSLLEINPLVVTTEGNLLCLDAKMVVDGNALYRQPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 AMHDPSQDDPREALAESHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGFPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++  GI++AV EV +N+P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDKAVKAVLVNIFGGIVRCDLIADGIIAAVNEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G  ++A+SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAELGREILAKSGLNIIAAATLTDAAVEAVKAAGG 387


>gi|50085913|ref|YP_047423.1| succinyl-CoA synthetase subunit beta [Acinetobacter sp. ADP1]
 gi|77416575|sp|Q6F8L4|SUCC_ACIAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|49531889|emb|CAG69601.1| succinyl-CoA synthetase beta chain [Acinetobacter sp. ADP1]
          Length = 388

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 195/398 (48%), Positives = 275/398 (69%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY V V +G++  S   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGVSVQEGILARSAEEAVAAFEQLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S +       +++G+ L+T QT   G  VN V V +    + RELY
Sbjct: 58  -------GGVKVVKSKEEAADYANQLIGTNLVTYQTDANGQPVNSVLVCEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       L    Y+AF + D +L EINPL + +NG +  +D+KI  D NALYR  +I
Sbjct: 171 KDKQIGQFVKLMAGAYQAFVENDFALFEINPLSVRENGDILAVDAKIGIDSNALYRLPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD S+E+ RE++A +  L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AASRDKSQENERELKASEFELNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N ++G +++ ESGL + +A  L DAA+KIV AVKG
Sbjct: 351 EGNNAELGAKILDESGLKLTSANGLSDAAEKIVAAVKG 388


>gi|323333394|gb|EGA74790.1| Lsc2p [Saccharomyces cerevisiae AWRI796]
          Length = 427

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 161/399 (40%), Positives = 239/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +++++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARQLEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 426


>gi|50302613|ref|XP_451242.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640373|emb|CAH02830.1| KLLA0A05478p [Kluyveromyces lactis]
          Length = 422

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 170/396 (42%), Positives = 251/396 (63%), Gaps = 5/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y V   KG    +V  A    K L G   VVK+Q   GGRGKG F 
Sbjct: 26  LSIHEYRSAELLRQYGVGTPKGAAAHTVDEATKIAKELGGKNLVVKAQALTGGRGKGHFD 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 + G+ +  S++       ++LG  LITKQ+G  G  V+ VY+ +  +   E YL
Sbjct: 86  N---GMQSGIHMIDSVQDATEVSGKMLGYHLITKQSGIKGKLVSGVYIVERVNAKHEAYL 142

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     I S++GGM+IE+VAK  P  I K  ++  +G+T E  A +   L   
Sbjct: 143 SILMDRKTKKPLIICSSEGGMNIEDVAKTNPDAIKKFYVEDSVGLTPETAAEIAASLGFS 202

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPL--IIMKNGRLRVLDSKISFDDNALYRHLD 238
            +A  D  D    LYK F +KD + +EINPL  ++ ++ ++  +D+K  FDDNA +R  D
Sbjct: 203 KEAEADAKDAVLKLYKIFKEKDATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASFRQKD 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD+++ED  E+ AK+ +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFLD
Sbjct: 263 VYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AFK+I S+ +V  I +NIFGGI+RCD + +G+++A K + + +P+V R
Sbjct: 323 CGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPIVAR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           L+G N++ G R+IAESGL + +  +LD AA+K+V  
Sbjct: 383 LQGTNLEQGRRIIAESGLKIYSFDELDPAAEKVVEL 418


>gi|56707643|ref|YP_169539.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670114|ref|YP_666671.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456713|ref|ZP_03665186.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370158|ref|ZP_04986164.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874460|ref|ZP_05247170.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81597819|sp|Q5NHF3|SUCC_FRATT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123359573|sp|Q14IV5|SUCC_FRAT1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56604135|emb|CAG45137.1| Succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320447|emb|CAL08520.1| Succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568402|gb|EDN34056.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840459|gb|EET18895.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158801|gb|ADA78192.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 387

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 197/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK ILINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAILINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|255660004|ref|ZP_05405413.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mitsuokella
           multacida DSM 20544]
 gi|260847757|gb|EEX67764.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mitsuokella
           multacida DSM 20544]
          Length = 398

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 183/402 (45%), Positives = 254/402 (63%), Gaps = 16/402 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+KA+LR Y V V  G    SV  A    + L     VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKAILRSYGVNVPTGKPAFSVEEAVENARELGTDTVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL++V     E+LG  LIT QTGP G RVN + +E GA I +E YL
Sbjct: 58  -------GGVKVVHSLEAVEKAAEELLGKVLITHQTGPAGKRVNRLLIEAGAAIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  +  + S +GGM+IE+VA + P KI K  IDP +G+       +   +   
Sbjct: 111 SFVIDRQTARIVMMGSEEGGMEIEKVAAEMPDKILKEYIDPAVGLLPFQANRMAYGMHFP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      L  NLY+AF  KD SL EINPL++ ++  +  LD+K++FDD+AL+RH D++
Sbjct: 171 HDSVRKATKLMMNLYRAFVGKDCSLAEINPLVVTEDAEVMALDAKLNFDDSALFRHPDLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E  A +  L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 231 ELRDETEEDPKERRAAKAGLNYVNLGGDVACMVNGAGLAMATVDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF+I+      KGI +NIFGGI +CD++ +GI+ A K +      + +P+
Sbjct: 291 GDSTPEKIAEAFRIMLDGGQAKGIFVNIFGGINKCDLVAEGIVDAAKMISEDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVK 396
           V+RLEG NV+ G  ++ ++ + NVI A  ++  A+ IV  VK
Sbjct: 351 VVRLEGTNVERGREILQDTPIANVIMAPTMEGGAETIVRLVK 392


>gi|315126693|ref|YP_004068696.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas sp. SM9913]
 gi|315015207|gb|ADT68545.1| succinyl-CoA synthetase subunit beta [Pseudoalteromonas sp. SM9913]
          Length = 388

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 187/386 (48%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSQGFACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L   F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFVKIFMGLGNMFNDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A+S LN+I A  L D
Sbjct: 351 GTNAELGREVLAKSDLNIIAAESLTD 376


>gi|328675717|gb|AEB28392.1| Succinyl-CoA ligase [ADP-forming] beta chain [Francisella cf.
           novicida 3523]
          Length = 387

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|313895288|ref|ZP_07828845.1| succinate-CoA ligase, beta subunit [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976183|gb|EFR41641.1| succinate-CoA ligase, beta subunit [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 396

 Score =  448 bits (1152), Expect = e-124,   Method: Composition-based stats.
 Identities = 179/401 (44%), Positives = 254/401 (63%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR+Y V V  G+   +V AA    + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREYGVKVPNGLPAFTVDAAVDNAEKLGAPVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    RE+LG TL+T QTGP G  VN + +E+G+ I +E YL
Sbjct: 58  -------GGVKIAKTTDEVRRYARELLGKTLVTHQTGPEGKVVNRLLIEEGSKIKKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  +  + S +GG++IE+VA+++P+KI K  IDP++G+       +   + + 
Sbjct: 111 SFVIDRLSASIVMMGSEEGGVEIEKVAEEHPEKIVKEYIDPVVGLMPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   LY AF  KD S +EINPL++ ++  +  LD+K++FDD+ALYRH DI 
Sbjct: 171 APAVRKASTLMQRLYAAFIGKDCSQVEINPLVVTEDDDVIALDAKLNFDDSALYRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD SEED +E+EA  H L+Y+ L G++ CMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 231 ELRDDSEEDPKELEASAHGLNYVNLGGDVACMVNGAGLAMATVDMLKHCGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G +  +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSAPEKIATAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKLISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V  G  ++  + + NV  A  ++D A++IV  V
Sbjct: 351 VVRLEGTKVTEGREILKNTPIGNVFAAASMEDGAKQIVELV 391


>gi|153005045|ref|YP_001379370.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5]
 gi|152028618|gb|ABS26386.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 387

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/386 (50%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +LR++ V V +G +  +   AE A + L G +  VK+QIHA         
Sbjct: 1   MKIHEYQAKDILRRFGVAVPRGYLAVTPLEAEGAARQLGGGICAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S          +LG  L T QTGP G  V  VY+E+G  I RELYL
Sbjct: 52  -GGRGKGGGVRLARSPDEARQHAEAMLGMMLKTPQTGPEGQEVRKVYIEEGCRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +G +A +AS +GG+DIEEVAK +P+KI +  IDPLIG+       L   L L 
Sbjct: 111 GMTLDREAGRLAVMASIEGGVDIEEVAKRHPEKILREWIDPLIGLMPYQARRLAFGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          L+ A+   D SL EINPL+I   G +  LD+K++FDDNALYRH DI 
Sbjct: 171 GDSVGAFVRFATGLHNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYRHADIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED +E  AK+++LSYIALDG+IGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDPDEEDPKETTAKEYDLSYIALDGDIGCMVNGAGLAMATMDVIKLSGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+DKV AA KII SD +V+ +L+NIFGGIM+CDV+  GI++A ++V + +PLV+RLE
Sbjct: 291 GGADEDKVTAALKIILSDPAVRAVLVNIFGGIMKCDVIANGIVAAARQVGLALPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV++G  ++A S L++I A DL D
Sbjct: 351 GTNVELGKEILAHSELDIIPADDLGD 376


>gi|226951554|ref|ZP_03822018.1| succinyl-CoA synthetase beta chain [Acinetobacter sp. ATCC 27244]
 gi|294651211|ref|ZP_06728539.1| succinyl-CoA ligase subunit beta [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837696|gb|EEH70079.1| succinyl-CoA synthetase beta chain [Acinetobacter sp. ATCC 27244]
 gi|292822864|gb|EFF81739.1| succinyl-CoA ligase subunit beta [Acinetobacter haemolyticus ATCC
           19194]
          Length = 388

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 279/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V +    + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQVSQFVKIMGAAYQAFVENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|217977878|ref|YP_002362025.1| malate--CoA ligase subunit beta [Methylocella silvestris BL2]
 gi|217503254|gb|ACK50663.1| succinyl-CoA synthetase, beta subunit [Methylocella silvestris BL2]
          Length = 399

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 173/384 (45%), Positives = 251/384 (65%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQAK +L  + V   +G V  S   A      L G  + VK+QIH+GGRGK    
Sbjct: 6   LDIHEYQAKEILANFGVATPRGAVAYSPDQAVYCATELGGWHWAVKAQIHSGGRGKA--- 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +   ++LG TL+T QTGP G  V  VY+E      RE+YL
Sbjct: 63  -------GGVKLCKTYNEVRAAASDMLGKTLVTNQTGPEGKIVQRVYIEAAEPFDREIYL 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS  GGM+IEE+AK++P++I +++++P +G+ + +   L   L L 
Sbjct: 116 GFVLDRKVERVRIIASRFGGMEIEEIAKEHPEEILQVVVEPAVGLQAFEARELAFGLGLN 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D +++EINPL++ K+ R+  LD+K+SFDDNAL+R   I 
Sbjct: 176 LKQVSRAVQSMLGCYRAFRDLDATMVEINPLVVTKDDRVLALDAKMSFDDNALFRRSAIS 235

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD S+ED RE++A +HNL+Y+ LDG+IGC+VNGAGLAMATMD+IK  GGAPANFLDVG
Sbjct: 236 DMRDHSQEDPREVQAAEHNLNYVGLDGDIGCIVNGAGLAMATMDMIKYAGGAPANFLDVG 295

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VAAAF+++ SD +VK IL+N+F GI RCD + +G++ A + + +N+PL++RL 
Sbjct: 296 GGASPERVAAAFRLVLSDRNVKAILVNVFAGINRCDWVAEGVVQACRTLNVNVPLIVRLS 355

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N   G  +I  SGL +I+A  L
Sbjct: 356 GTNFAAGREIIVNSGLPIISADTL 379


>gi|167626463|ref|YP_001676963.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|241668896|ref|ZP_04756474.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877428|ref|ZP_05250138.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|189030242|sp|B0TZ23|SUCC_FRAP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167596464|gb|ABZ86462.1| Succinate--CoA ligase (ADP-forming) [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|254843449|gb|EET21863.1| succinyl-CoA synthetase subunit beta [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 387

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 267/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLTLIPADGLADAADKVVKSL 386


>gi|89256837|ref|YP_514199.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica LVS]
 gi|156503005|ref|YP_001429070.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009270|ref|ZP_02274201.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368116|ref|ZP_04984136.1| succinyl-CoA synthetase, beta subunit [Francisella tularensis
           subsp. holarctica 257]
 gi|290954375|ref|ZP_06558996.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312196|ref|ZP_06802998.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122500388|sp|Q2A253|SUCC_FRATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189029910|sp|A7NDR1|SUCC_FRATF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89144668|emb|CAJ79992.1| Succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica LVS]
 gi|134253926|gb|EBA53020.1| succinyl-CoA synthetase, beta subunit [Francisella tularensis
           subsp. holarctica 257]
 gi|156253608|gb|ABU62114.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 387

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV-YVEDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V   ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|189491689|ref|NP_001094220.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           [Rattus norvegicus]
 gi|149036796|gb|EDL91414.1| rCG56440 [Rattus norvegicus]
 gi|169642263|gb|AAI60886.1| Suclg2 protein [Rattus norvegicus]
          Length = 434

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 168/386 (43%), Positives = 233/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F 
Sbjct: 40  LNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFD 99

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 100 ---SGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 156

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 157 AILMDRSHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 216

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 217 GSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 276

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 277 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 336

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 337 GGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLE 396

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 397 GTNVQEAQNILKSSGLPITSAVDLED 422


>gi|34496530|ref|NP_900745.1| succinyl-CoA synthetase subunit beta [Chromobacterium violaceum
           ATCC 12472]
 gi|81656532|sp|Q7NZ47|SUCC_CHRVO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|34102384|gb|AAQ58750.1| succinyl-CoA synthetase, beta subunit [Chromobacterium violaceum
           ATCC 12472]
          Length = 390

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/399 (49%), Positives = 272/399 (68%), Gaps = 11/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +Y +PV +G++  S   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLSRYGLPVQQGILAKSPEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +      + ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSREEAAEVAKTLIGTNLVTYQTDAAGQPVNSVLVCEDMYPVQRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR S  V F+ ST+GG++IE+VA++ P+KI K+ +DPL+G+           L L
Sbjct: 111 LGAVVDRGSQRVVFMVSTEGGVEIEKVAEETPEKIIKIEVDPLVGMQPFQARDAAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G        L    Y+AF + D +L E+NPL + +NG L  +D KI+ D NALYRH ++
Sbjct: 171 SGAQVAAFSKLMLGSYQAFIENDFALFEVNPLALRENGELACVDGKINLDSNALYRHPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 LAQRDKSQENEREVKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D+SV+G+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILADTSVQGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           EG N ++G +++ ESGL + +A  L+DAA+KIV AVK V
Sbjct: 351 EGNNAELGAKILDESGLKLTSAQGLNDAAEKIVAAVKAV 389


>gi|134302424|ref|YP_001122394.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|189030243|sp|A4IZC2|SUCC_FRATW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|134050201|gb|ABO47272.1| succinyl-CoA synthetase, beta chain [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 387

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALKGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|262281282|ref|ZP_06059064.1| succinyl-CoA synthetase subunit beta [Acinetobacter calcoaceticus
           RUH2202]
 gi|299768992|ref|YP_003731018.1| succinyl-CoA synthetase subunit beta [Acinetobacter sp. DR1]
 gi|262257513|gb|EEY76249.1| succinyl-CoA synthetase subunit beta [Acinetobacter calcoaceticus
           RUH2202]
 gi|298699080|gb|ADI89645.1| succinyl-CoA synthetase subunit beta [Acinetobacter sp. DR1]
          Length = 388

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 279/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V +    + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQISQFVKIMAAAYQAFVENDFALFEINPLSVRENGDILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|169794949|ref|YP_001712742.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii AYE]
 gi|184159272|ref|YP_001847611.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           ACICU]
 gi|213157646|ref|YP_002320444.1| succinyl-CoA synthase, beta subunit [Acinetobacter baumannii
           AB0057]
 gi|215482497|ref|YP_002324683.1| Succinyl-CoA synthetase beta chain(SCS-beta) [Acinetobacter
           baumannii AB307-0294]
 gi|239502282|ref|ZP_04661592.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB900]
 gi|260549008|ref|ZP_05823230.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter sp.
           RUH2624]
 gi|260557316|ref|ZP_05829532.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           baumannii ATCC 19606]
 gi|301346632|ref|ZP_07227373.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB056]
 gi|301510302|ref|ZP_07235539.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB058]
 gi|301596860|ref|ZP_07241868.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           AB059]
 gi|332854239|ref|ZP_08435259.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013150]
 gi|332866318|ref|ZP_08436923.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013113]
 gi|332872533|ref|ZP_08440502.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6014059]
 gi|226733920|sp|B0VEF2|SUCC_ACIBY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734310|sp|B7GXK7|SUCC_ACIB3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734311|sp|B7I6T2|SUCC_ACIB5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734312|sp|B2HXG0|SUCC_ACIBC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734400|sp|A3M887|SUCC_ACIBT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169147876|emb|CAM85739.1| succinyl-CoA synthetase beta chain [Acinetobacter baumannii AYE]
 gi|183210866|gb|ACC58264.1| Succinyl-CoA synthetase, beta subunit [Acinetobacter baumannii
           ACICU]
 gi|193078184|gb|ABO13131.2| succinyl-CoA synthetase beta chain [Acinetobacter baumannii ATCC
           17978]
 gi|213056806|gb|ACJ41708.1| succinyl-CoA synthase, beta subunit [Acinetobacter baumannii
           AB0057]
 gi|213986969|gb|ACJ57268.1| Succinyl-CoA synthetase beta chain(SCS-beta) [Acinetobacter
           baumannii AB307-0294]
 gi|260408176|gb|EEX01647.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter sp.
           RUH2624]
 gi|260409422|gb|EEX02724.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           baumannii ATCC 19606]
 gi|322509186|gb|ADX04640.1| sucC [Acinetobacter baumannii 1656-2]
 gi|323519214|gb|ADX93595.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii
           TCDC-AB0715]
 gi|325123209|gb|ADY82732.1| succinyl-CoA synthetase beta chain [Acinetobacter calcoaceticus
           PHEA-2]
 gi|332728164|gb|EGJ59552.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013150]
 gi|332734666|gb|EGJ65770.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6013113]
 gi|332739219|gb|EGJ70077.1| succinate-CoA ligase, beta subunit [Acinetobacter baumannii
           6014059]
          Length = 388

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 279/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S + VI     I+G+ L+T QT   G  VN + V +    + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|301629461|ref|XP_002943858.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta-like,
           partial [Xenopus (Silurana) tropicalis]
          Length = 358

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 190/368 (51%), Positives = 247/368 (67%), Gaps = 10/368 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LR   VPV +G+   +V  A  A + L GP++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRNSGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+  V     +ILG  L T QTGP G +V  +Y+EDGADI  ELY+
Sbjct: 52  -GGRGKGGGVKVAKSIDEVKQLSEQILGMQLKTHQTGPEGQKVRRLYIEDGADIKNELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+ DR +  VAFIAS+QGGMDIEEVA   P+KI    IDPL G+T++    +   + L 
Sbjct: 111 SLVTDRATQKVAFIASSQGGMDIEEVAHATPEKIITEYIDPLTGITADQSRKIAAAIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     DLF  LY+ + D D SL+EINPL     G+L  LD+K +FD NAL+RH +I 
Sbjct: 171 GGSVEQAVDLFARLYQCYMDTDASLVEINPLNCDSTGKLIALDAKFNFDANALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ EED  E+EA + +L+YI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVG
Sbjct: 231 ALRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFKI+  +  VKGIL+NIFGGIM+CD +  G+++A K V +N+PLV+R++
Sbjct: 291 GGATPEKVTEAFKIMLKNPKVKGILVNIFGGIMKCDTIATGVITACKAVNLNVPLVVRMK 350

Query: 361 GANVDIGN 368
           G N ++G 
Sbjct: 351 GTNEELGK 358


>gi|292490720|ref|YP_003526159.1| succinyl-CoA synthetase subunit beta [Nitrosococcus halophilus Nc4]
 gi|291579315|gb|ADE13772.1| succinyl-CoA synthetase, beta subunit [Nitrosococcus halophilus
           Nc4]
          Length = 389

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 181/386 (46%), Positives = 255/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK L   Y +PV  G    +   A +  + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MILHEFQAKRLFADYGIPVPPGGPAETAEEAGAQARELGGERWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV SSL+ +     ++LG+ L+T QT  TG  V  + +E  A + RE YL
Sbjct: 58  -------GGVRVVSSLEELSEVGAQLLGTRLVTAQTDATGLPVKTLLIEQPAAVAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  VDR    V  + S++GG+DIE+VA ++P +I +L+I+P++G+       +   L L 
Sbjct: 111 ATTVDRQLKRVVIMVSSRGGVDIEQVAAEHPGEILQLVINPIMGLQPYQCREVGFALGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+ R     +   +Y+ F ++D +L+E+NPL++ + G L  LD+K+  DDNA +RH   +
Sbjct: 171 GEQRRQLSQIMEKMYQLFREQDGNLVEMNPLVVTEQGNLLALDAKVILDDNAFFRHPAWE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA+ H LSYIAL+G I CMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ALRDPTQEDPKEVEARAHGLSYIALEGEIACMVNGAGLAMATMDLIKLQGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D+VA AFK+I +D  VK IL+NIFGGI+RCD++ +GI+ AV+EV I +P+V+RLE
Sbjct: 291 GTATADRVAEAFKLILADGKVKSILVNIFGGIVRCDLIAEGIIQAVQEVAIQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+ +SG+N+ITA DL D
Sbjct: 351 GTNAKQGRTLLQDSGMNLITADDLTD 376


>gi|114330248|ref|YP_746470.1| succinyl-CoA synthetase, beta subunit [Nitrosomonas eutropha C91]
 gi|114307262|gb|ABI58505.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosomonas
           eutropha C91]
          Length = 397

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 195/384 (50%), Positives = 262/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKA+L +Y + V  G+   SV  A  A + L G  +VVK+QI+AGGRGK    
Sbjct: 1   MKIHEYQAKAILSRYAISVPAGIACFSVEEAILAAEKLGGDKWVVKAQIYAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V      +L + L+T QTGP G  V  +Y+E G DI  E Y+
Sbjct: 58  -------GGVKLAKSIVEVRQFSEAMLFAPLVTHQTGPQGQIVRRLYIEQGIDISHEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR S  V+ IAS  GGMDIE VA   P+KI K  I+PL G+  +D   +   + L 
Sbjct: 111 ALVVDRASQCVSLIASDAGGMDIEGVATSTPEKIHKTQINPLEGLNLQDAERVVRQINLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R     +   LY+AF + D+SLLEINPLI+  + RL  LD+K++FDDNAL+RH +I 
Sbjct: 171 ESCRSAAVSMLGALYQAFDENDISLLEINPLIVTPDNRLIALDAKMNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ E+D  E+EA +H LSYI LDG+IGC+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 ALRDLDEDDPLEVEAARHGLSYIPLDGDIGCLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++ IL+NIFGGIMRCDV+  G++SAV+EVK+ +PL++RLE
Sbjct: 291 GGATVEKVTEAFKLMLRNPDLQAILVNIFGGIMRCDVIADGVVSAVREVKLAVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G +++A+SGL +I   ++
Sbjct: 351 GTNVELGKKILADSGLTIIAGSNM 374


>gi|149191114|ref|ZP_01869373.1| succinyl-CoA synthetase subunit beta [Vibrio shilonii AK1]
 gi|148835042|gb|EDL52020.1| succinyl-CoA synthetase subunit beta [Vibrio shilonii AK1]
          Length = 388

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 183/385 (47%), Positives = 246/385 (63%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTEKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL+I   G L  LD KI+ D NALYR   ++
Sbjct: 171 GDQIKQFVKIFMGLGNMFAQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N  +G++ +AESGLN+I A  L 
Sbjct: 351 GNNAPLGSKKLAESGLNIIAANSLT 375


>gi|118497193|ref|YP_898243.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           novicida U112]
 gi|194323492|ref|ZP_03057269.1| succinyl-CoA synthetase, beta subunit family [Francisella
           tularensis subsp. novicida FTE]
 gi|208778985|ref|ZP_03246331.1| succinyl-CoA synthetase, beta subunit family [Francisella novicida
           FTG]
 gi|254372558|ref|ZP_04988047.1| succinyl-CoA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374017|ref|ZP_04989499.1| succinyl-CoA synthetase [Francisella novicida GA99-3548]
 gi|189030205|sp|A0Q5H4|SUCC_FRATN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118423099|gb|ABK89489.1| succinyl-CoA synthetase, beta chain [Francisella novicida U112]
 gi|151570285|gb|EDN35939.1| succinyl-CoA synthetase [Francisella novicida GA99-3549]
 gi|151571737|gb|EDN37391.1| succinyl-CoA synthetase [Francisella novicida GA99-3548]
 gi|194322347|gb|EDX19828.1| succinyl-CoA synthetase, beta subunit family [Francisella
           tularensis subsp. novicida FTE]
 gi|208744785|gb|EDZ91083.1| succinyl-CoA synthetase, beta subunit family [Francisella novicida
           FTG]
 gi|328676665|gb|AEB27535.1| Succinyl-CoA ligase [ADP-forming] beta chain [Francisella cf.
           novicida Fx1]
          Length = 387

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|30248081|ref|NP_840151.1| ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain
           [Nitrosomonas europaea ATCC 19718]
 gi|30179966|emb|CAD83961.1| ATP-citrate lyase/succinyl-CoA ligases:ATP-grasp domain
           [Nitrosomonas europaea ATCC 19718]
          Length = 397

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 194/384 (50%), Positives = 260/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKA+L +Y V V  GV   SV  A  A + L G  +VVK+QI+A         
Sbjct: 1   MKIHEYQAKAILSRYGVSVPAGVACFSVEEAVLAAEKLGGNKWVVKAQIYA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V      +L + L+T QTGP G  V+ +Y+E G DI  E YL
Sbjct: 52  -GGRGKGGGVKLAKSIAEVRQFAEAMLFAPLVTHQTGPQGRIVHRLYIEQGVDIRHEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDRTS  V+ IAS  GGMDIE+VA   P+KI K+ IDPL G+   D   +   ++L 
Sbjct: 111 ALVVDRTSQCVSLIASDAGGMDIEQVAAGSPEKIHKIQIDPLAGLNLRDAERIVREIDLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     +   LY+AF + D SLLEINPLI+  + RL  LD+K++FDDNAL+RH +I 
Sbjct: 171 ESCQSAAITMLDALYRAFDENDASLLEINPLIVTPDNRLIALDAKMNFDDNALFRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+ E+D  E EA QH LSYI LDG+I C+VNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 ALRDLDEDDPLEAEASQHGLSYIPLDGDIACLVNGAGLAMATMDIIKLYGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  +  ++ IL+NIFGGIMRCDV+ +G++SA +EVK+ +PL++RLE
Sbjct: 291 GGATVEKVTEAFKLMLRNPGLQAILVNIFGGIMRCDVIAEGVVSAAREVKLTVPLIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G +++A+SGL +I+A ++
Sbjct: 351 GTNVELGKKILADSGLTIISAGNM 374


>gi|323304746|gb|EGA58506.1| Lsc2p [Saccharomyces cerevisiae FostersB]
          Length = 427

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ +    +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYLFDELDPAAKKVVELTQ 426


>gi|323348487|gb|EGA82732.1| Lsc2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 427

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G+  A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLXEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 426


>gi|67541673|ref|XP_664604.1| hypothetical protein AN7000.2 [Aspergillus nidulans FGSC A4]
 gi|40742456|gb|EAA61646.1| hypothetical protein AN7000.2 [Aspergillus nidulans FGSC A4]
          Length = 456

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 180/414 (43%), Positives = 249/414 (60%), Gaps = 19/414 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE   K+L     V+K+Q+ AGGRGKG F 
Sbjct: 30  LSIHEYLSANLLKSYGVGVPKGEVARSAEEAEKVAKSLGNDDMVIKAQVLAGGRGKGHFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N V++ +     RE YL
Sbjct: 90  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAGGRLCNAVFIVERKFARREFYL 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS+QGGMDIE VAK+ P  I    ID  +GVT      + + L   
Sbjct: 147 AVLMDRKTQGPVIVASSQGGMDIEAVAKENPDAIITTPIDINVGVTDAIATKIANELGFS 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D      NLYKAF + D + +EINPL    + ++  +D+K+ FDDNA +R  +I 
Sbjct: 207 EQCVDDAKKTIQNLYKAFMETDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCM----------------VNGAGLAMATMD 284
             RD ++ED+ E++A +H L++I LDG+IGC+                VNGAGLAMATMD
Sbjct: 267 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLGVYPRPNDIIAVLTRTVNGAGLAMATMD 326

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
           IIKL GG+PANFLDVGGGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++
Sbjct: 327 IIKLNGGSPANFLDVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLIN 386

Query: 345 AVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            V+E+ +  P+V RL+G N++  ++LI ESGL + +  DL  AA+K V   K V
Sbjct: 387 VVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAAEKSVQFSKVV 440


>gi|307200144|gb|EFN80453.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Harpegnathos saltator]
          Length = 449

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 182/395 (46%), Positives = 244/395 (61%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYSLLNEAGVPTPKFGVAKTPDEAAKLAAGLQSKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++  + +   +   ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 98  GSSVS---GVKMCETPEEAKALAGQMLGKLLITKQTGEAGRICNAVMVTQRMFPRKEYYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E    + + L L+
Sbjct: 155 AVMMERAFGGPVIIASSQGGVNIEEVAATNPGAIMYEPIDINKGITKEQAERITNKLGLE 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    D+  NLY+ F  KD  LLE+NPL    NG    LD K  FDDNA +R  ++ 
Sbjct: 215 -NVKDYISDIIMNLYQMFLKKDALLLEVNPLAEDINGNYFALDCKCRFDDNAEFRQKELF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E++A + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 274 SLRDWTQEDKKEVDAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 334 GGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA +GL ++   DLD+AA+  V   
Sbjct: 394 GTNVDEAKALIANAGLKIVPIDDLDEAARVAVKLS 428


>gi|284035901|ref|YP_003385831.1| succinyl-CoA synthetase subunit beta [Spirosoma linguale DSM 74]
 gi|283815194|gb|ADB37032.1| succinyl-CoA synthetase, beta subunit [Spirosoma linguale DSM 74]
          Length = 405

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 191/408 (46%), Positives = 268/408 (65%), Gaps = 13/408 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+KY V + +G+V  S   A  A K L         VVKSQIHAGGRGK
Sbjct: 1   MNIHEYQGKEILKKYGVRIQEGIVAESPEKAVEAAKLLIAQSGQKFVVVKSQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G+        + GV +  S+ +V    + ++G+ L+T QTGP G RVN V + +     G
Sbjct: 61  GQIV---GSEQRGVALAKSVDAVRDITKNLIGNILVTHQTGPEGKRVNKVLIAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E+Y+ +L+DRT      +AST+GGMDIEEVA+  P+KI K  IDP +G+      
Sbjct: 118 PSEPKEMYIGILLDRTKACNVIMASTEGGMDIEEVAEHSPEKIVKEWIDPAVGLQPFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G+A  +       LYKA+ D D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 178 KVAFGLGLEGEAFKEMVKFVTALYKAYVDTDASMFEINPVLKTSDNKILAVDAKVNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRHLD++ +RD++EED  E+EA  ++L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 238 ALYRHLDLKAMRDLAEEDPLEVEASANDLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGGGA+   V A F+II  D +VK ILINIFGGI+RCD +  G++ A K +  
Sbjct: 298 EPANFLDVGGGANAKTVEAGFRIILKDPNVKAILINIFGGIVRCDRVATGVVEAYKAIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           I +P+++RL+G N + G ++I ESGL V +A+ L +AA+K+   V+ +
Sbjct: 358 IPVPIIVRLQGTNAEEGAKIIDESGLKVQSAVLLKEAAEKVRQVVEAL 405


>gi|259146745|emb|CAY80002.1| Lsc2p [Saccharomyces cerevisiae EC1118]
          Length = 427

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 162/399 (40%), Positives = 239/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAHLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 426


>gi|115315224|ref|YP_763947.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           holarctica OSU18]
 gi|122324779|sp|Q0BKS4|SUCC_FRATO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|115130123|gb|ABI83310.1| succinate--CoA ligase (ADP-forming) [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 387

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 194/396 (48%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV-YVEDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V   ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGIFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|323308919|gb|EGA62151.1| Lsc2p [Saccharomyces cerevisiae FostersO]
          Length = 427

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 161/399 (40%), Positives = 238/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IE+VA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEKVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ +    +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYLFDELDPAAKKVVELTQ 426


>gi|187932029|ref|YP_001892014.1| succinyl-CoA synthetase subunit beta [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226734955|sp|B2SDM1|SUCC_FRATM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|187712938|gb|ACD31235.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 387

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAARAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|255721911|ref|XP_002545890.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240136379|gb|EER35932.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 416

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 165/395 (41%), Positives = 237/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y VP+ +G   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLSQYGVPIPRGYAATTPEGAYEAAKKLGTNELVIKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E Y+
Sbjct: 80  ---SGLQGGVKLISSAEEAKDLAGQMLNHKLITKQTGAAGKEVTAVYIVERRDAATEAYV 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       +AS QGGMDIE VA   P  I    +    GV+      +  +L   
Sbjct: 137 AILMDRAKQTPIIVASAQGGMDIEGVAAKDPSAIKTFPVPLEEGVSDSLATEIAGVLGFT 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +      +LY  F ++D + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 197 QDAIPEAAKTIQSLYNCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED +E+EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 257 SWRDPTQEDPQEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SDS V GI +NIFGGI+RCD + KG+++A K   ++IP+V+RL+
Sbjct: 317 GTATPETIEKAFELILSDSKVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVVRLQ 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N+     LI  SGL +    DLD AA+KIV   
Sbjct: 377 GTNMAEAKELIDNSGLKLYAFEDLDPAAEKIVELA 411


>gi|260945463|ref|XP_002617029.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238848883|gb|EEQ38347.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 425

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 242/395 (61%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL  Y V V KG   ++   A  A K+L     V+K+Q   GGRGKG F 
Sbjct: 31  LSLHEYRSAALLESYGVGVPKGFAATTPEGAYEAAKSLGTNELVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++ SS +       ++L   LITKQTG  G  V  VY+ +  D   E YL
Sbjct: 91  N---GFQGGVKLISSPEEAKDLAGKMLHHKLITKQTGAAGKEVTAVYIVERRDARTEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR++ +   +AS QGGMDIE VA   P  I    +D   GVT E    +  +L   
Sbjct: 148 AILMDRSTQLPMIVASAQGGMDIEGVAAKDPDAIKTFSVDLNEGVTDELATKVASVLGYT 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A  +      NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 208 EEAIPEAAKAVQNLYKVFTEKDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED +E EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 268 SWRDPTQEDPQESEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SD  V GI +NIFGGI+RCD + +G+++A K  K++IP+V+RL+
Sbjct: 328 GTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFKLDIPVVVRLQ 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N++    LI  SGL +    DLD AA+KIV   
Sbjct: 388 GTNMEKAKELIENSGLKLYAFEDLDPAAEKIVQLA 422


>gi|254490920|ref|ZP_05104102.1| succinyl-CoA synthetase, beta subunit subfamily [Methylophaga
           thiooxidans DMS010]
 gi|224463829|gb|EEF80096.1| succinyl-CoA synthetase, beta subunit subfamily [Methylophaga
           thiooxydans DMS010]
          Length = 390

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 180/386 (46%), Positives = 253/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  +Y VP  +G V++    A  A + L G  +VVK+Q+H GGRGK    
Sbjct: 1   MNLHEFQAKQLFNRYGVPTPQGQVVTEAAQARQAAELLAGERWVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V + L  V +    +LG  L+T QT   G  ++ V VE   DI RE+YL
Sbjct: 58  -------GGVKVVNQLDEVETAASAMLGQHLVTHQTTAEGLPIHQVLVEKPTDIAREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+S  + F+ S QGGMDIE VA++ P+ I  L +DP++G+           L L 
Sbjct: 111 AVLLDRSSQRIVFMISAQGGMDIEAVAEESPEAILNLYVDPIVGLQGYQCRRAGFFLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      +  +LY+ F + D SL+EINPL++   G L  +D+KI+ DDN L+RH D+ 
Sbjct: 171 GAAFKQLQQVMQSLYQLFTENDASLVEINPLVVTGEGDLLAVDAKINLDDNGLFRHADLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D ++ED  E+ A+++ L+YI+LDGN+ CMVNGAGLAMATMD+I+  GG PANFLDVG
Sbjct: 231 EMFDPTQEDDAEVIAREYGLNYISLDGNVACMVNGAGLAMATMDLIQKEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   D+VA AFK+I SD+ VK IL+NIFGGI+RCD++ +GI+ A KEV + +P+V+RLE
Sbjct: 291 GGTTADRVAEAFKLILSDTKVKSILVNIFGGIVRCDLIAEGIIQAAKEVDLTLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G  L+A S +++  A DL D
Sbjct: 351 GTNAEQGRELLANSQMSIYAAQDLTD 376


>gi|68249742|ref|YP_248854.1| succinyl-CoA synthetase subunit beta [Haemophilus influenzae
           86-028NP]
 gi|81335829|sp|Q4QLA3|SUCC_HAEI8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|68057941|gb|AAX88194.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae
           86-028NP]
          Length = 389

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 265/397 (66%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV  G V  SV   +  +  L G  +  K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGDKWAAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++   ++   +   + LG  L+T QT   G  VN +Y E+  DI +E YL
Sbjct: 58  -------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S  V FIAS  GGM+IEEVA++    + K+ IDPL G        L   L L 
Sbjct: 111 SAVVDRASQKVMFIASPAGGMNIEEVAQNSLHLLHKVEIDPLFGGLPYQGRELAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+F  L + F +KD+SL+E+NPL++ K G L  LD+KIS DDNAL+RH D+ 
Sbjct: 171 GTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTKQGYLVCLDAKISVDDNALFRHKDLL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAGLAM TMDI+KLYGG PANFLDVG
Sbjct: 231 ALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+S +N++TA  L  AA+  V+A KG
Sbjct: 351 GTNAEMGRQILAQSDVNILTAQSLQQAAELAVNAAKG 387


>gi|83775290|dbj|BAE65412.1| unnamed protein product [Aspergillus oryzae]
          Length = 460

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 178/415 (42%), Positives = 250/415 (60%), Gaps = 20/415 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE+ +  LL+ Y V + KG V  S   AE+  K+L     V+K+Q+ AGGRGKG F 
Sbjct: 33  LSIHEHLSAKLLKSYGVGMPKGEVAYSAEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFD 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 93  N---GLKGGVRVIYSPTEAKMFAGQMIGHKLITKQTGAAGRLCNAVYICERKFARREFYL 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS+QGGMDIE VAK+ P+ I    ID  +GVT E    +   L   
Sbjct: 150 AVLMDRQSQSPVIVASSQGGMDIEAVAKETPEAIITTPIDIKVGVTDEIAGKIATELGFS 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 210 EQCITEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQKEVF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGC-----------------MVNGAGLAMATM 283
             RD ++ED+ E++A +H L++I LDG+IGC                 +VNGAGLAMATM
Sbjct: 270 SWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLGKNGNGLLVSSMLITDLVNGAGLAMATM 329

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DIIKL GG PANFLDVGGGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G++
Sbjct: 330 DIIKLNGGNPANFLDVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLI 389

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           + V E+ +  P+V RL+G N++  ++L+ ESGL + +  DL +AA+K V   K V
Sbjct: 390 NVVNEMGLRTPIVARLQGTNMEQAHKLLNESGLKIFSIEDLQNAAEKSVQFSKVV 444


>gi|119472925|ref|ZP_01614798.1| succinyl-CoA synthetase subunit beta [Alteromonadales bacterium
           TW-7]
 gi|119444643|gb|EAW25952.1| succinyl-CoA synthetase subunit beta [Alteromonadales bacterium
           TW-7]
          Length = 388

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 186/386 (48%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV++G    +   A +A + + G ++VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSQGFACDTPEEAAAAAEKIGGDMWVVKTQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++  V +     LG  L+T QT   G  V  + VE   DI  ELYL
Sbjct: 58  -------GGVKLVKTIDEVKAFAANWLGKNLVTYQTDENGQPVAKILVESCTDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  V F+AST+GG++IE VA++ P+ I K  IDPL+G  +     L   L L 
Sbjct: 111 GAVVDRASRKVVFMASTEGGVEIETVAEETPELIHKAEIDPLVGPQAYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI  D NALYR   I+
Sbjct: 171 PTQMKQFVKIFMGLGKMFNDFDFALLEINPLVITDEGNLHCLDGKIGIDGNALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ED+RE  A    L+Y+ALDGN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EFHDPSQEDAREAHAASFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V+ AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AVKEV +N+P+V+RLE
Sbjct: 291 GGATKERVSEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVNVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++  S L++I A  L D
Sbjct: 351 GTNAELGREVLKSSDLDIIAAESLTD 376


>gi|156778117|gb|ABU95433.1| Scs beta [Sawyeria marylandensis]
          Length = 415

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 267/396 (67%), Gaps = 4/396 (1%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++HEY +  LL+KY VPV  G V +S   A+    +L  P +VVK+QI AGGRGKG FK+
Sbjct: 22  SLHEYCSHQLLKKYKVPVPNGKVANSPEEAKEVAISLNEPKFVVKAQILAGGRGKGTFKD 81

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                KGGV++  +++ V     +++G+ L+T Q+G  G  V+ V+V+      RELY++
Sbjct: 82  ---GYKGGVKLVDTVEEVQEVASKMIGNVLVTIQSGAEGKPVHKVFVQGCIQAKRELYVA 138

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ- 180
           +L+DR +     IASTQGGM IE+VA+D P+ I KL +D   GV  + +A L D L+   
Sbjct: 139 ILLDRETKGPVIIASTQGGMSIEDVARDTPELILKLPVDIKKGVDEKKLAVLVDGLKFTT 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +     +  NLY AFC  D  L+EINPLI   +G +   D+KI+ DDNA YR  +I 
Sbjct: 199 KELKNKCMTVIKNLYTAFCKTDSVLMEINPLIETPDGNVVCADAKINIDDNAFYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++EDSR++EA +H L+YI L GNI  +VNGAGLAMATMDIIK YG  PANFLD G
Sbjct: 259 SLRDEAQEDSRDVEASKHGLNYIGLFGNIANLVNGAGLAMATMDIIKYYGAEPANFLDCG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+ +D+V AAFKI+  D  VK IL+NIFGGI +CDV+  GI+ AVKEV ++IPLV+RLE
Sbjct: 319 GGSSKDQVEAAFKILKKDKRVKAILVNIFGGITKCDVIASGIIDAVKEVGLDIPLVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +L+ ESGL  ITA +LDDAAQK+V  +K
Sbjct: 379 GTNAEEGIKLVNESGLKCITAKNLDDAAQKVVQCIK 414


>gi|227823162|ref|YP_002827134.1| malate--CoA ligase subunit beta [Sinorhizobium fredii NGR234]
 gi|227342163|gb|ACP26381.1| malate-CoA ligase, beta subunit [Sinorhizobium fredii NGR234]
          Length = 394

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 170/384 (44%), Positives = 247/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL +Y + + +G +  S   A    + + G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKELLSRYQIHIPRGGLAYSPEQAAYRAREIGGDRWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ S+   ++     +LG T++T QTGP G  V+ +YVE+  DI RE+Y+
Sbjct: 58  -------GGIKLCSTDHEIVEAADSMLGRTIVTHQTGPQGKLVSRLYVEEAMDIAREIYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS+ GGM+IEE+A+  P  I +  +DP +G+       +   L + 
Sbjct: 111 GFVLDRKSERIMIVASSSGGMEIEEIAEAEPDSIIRATVDPGVGMQDFQAREIAFGLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+AF D D S+LEINPL++ + G L  LD+K+SFD+NAL+R   I 
Sbjct: 171 NALIGRATQTLLGCYRAFVDYDASMLEINPLVVTRRGDLVALDAKMSFDENALFRRPHIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE  A    LSY+ LDGNIGC++NGAGLAMATMD+IK+ GG PANFLD+G
Sbjct: 231 EMRDKSQEDQRETYASDRGLSYVGLDGNIGCIINGAGLAMATMDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+VA +F+ + +D  V+ IL+NIF GI RCD + +G++ A++EV + +PLV+RL 
Sbjct: 291 GGASPDRVAKSFRAVLTDRQVETILVNIFAGINRCDWVAEGVIKALREVGVPVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N++ G R++AESG N+I A  L
Sbjct: 351 GTNMEEGRRILAESGENIIVAETL 374


>gi|312129840|ref|YP_003997180.1| succinyl-CoA synthetase, beta subunit [Leadbetterella byssophila
           DSM 17132]
 gi|311906386|gb|ADQ16827.1| succinyl-CoA synthetase, beta subunit [Leadbetterella byssophila
           DSM 17132]
          Length = 403

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 188/401 (46%), Positives = 260/401 (64%), Gaps = 13/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L KY V V +GVV S+V  AE A + +         VVKSQIHA   G 
Sbjct: 1   MNIHEYQGKEILSKYGVRVQRGVVASTVEEAEKAYQEISELTNSKFAVVKSQIHA---GG 57

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
               ++    + GV++  S + V +    +LG+TL+T QTG  G  VN V V +     G
Sbjct: 58  RGKGKIRGTEQRGVQLAKSAEDVKTIASNLLGNTLVTIQTGEEGKVVNKVLVAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +ELY+S+L+DRT      +AST+GGMDIEEVA+  P+KI K  IDP +G       
Sbjct: 118 DSEPKELYVSILLDRTKACNVIMASTEGGMDIEEVAEHTPEKIIKEWIDPRVGFQGYQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L L G A  +      +LYKA+ + D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 178 NVAYKLGLTGNANKEMVKFLTSLYKAYDETDSSMFEINPVLKTSDDKILAVDAKVNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+  LRD SEED  E+EA + +L+Y+ LDGN+GCMVNGAGLAMATMDIIKLYGG
Sbjct: 238 ALFRHPDLAALRDKSEEDPMEVEASESDLNYVKLDGNVGCMVNGAGLAMATMDIIKLYGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGGGA+   V A F++I  D +VK I +NIFGGI+RCD +  GI+ A K++ +
Sbjct: 298 EPANFLDVGGGANAVTVEAGFRLILKDPNVKAIFVNIFGGIVRCDRVANGIVEAYKKIGE 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+V+RL+G N + G ++I ESGL V +A+ L +AA+ +
Sbjct: 358 IPVPIVVRLQGTNAEEGAKIINESGLKVYSAVKLKEAAELV 398


>gi|311746758|ref|ZP_07720543.1| succinyl-CoA synthase, beta subunit [Algoriphagus sp. PR1]
 gi|126578437|gb|EAZ82601.1| succinyl-CoA synthase, beta subunit [Algoriphagus sp. PR1]
          Length = 404

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 191/407 (46%), Positives = 263/407 (64%), Gaps = 13/407 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQAK +L+ Y V +  G+V  +  AA  A   L        YV+K+QIHAGGRGK
Sbjct: 1   MNIHEYQAKEVLKGYGVRIQNGIVADNPEAAHEAAVKLNAETGTSWYVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G+ ++  ++   GV +   L+ V    + ILG TL+T QTGP G  VN + V +     G
Sbjct: 61  GKIQQTGSN---GVVLAKKLEDVADKAKAILGGTLVTHQTGPEGKVVNKILVAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E YLS+L+DR  G    +AST+GGMDIE+VA++ P+KI K  IDP +G+    + 
Sbjct: 118 DSEPKEYYLSILLDRAQGCNVIMASTEGGMDIEDVAENSPEKIIKEWIDPKVGLQGFQIR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S  EINP++   + ++  +D+K++ DDN
Sbjct: 178 KVAFKLGLTGTAFKEMVKFIAALYKAYEGTDSSQFEINPVLKTSDDKILAVDAKVNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ +LRD+SEED  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALYRHKDLADLRDLSEEDPLEVEAGKSGLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGGGA+   V A F+II  D +VK ILIN+FGGI+RCD +  G++ A K +  
Sbjct: 298 EPANFLDVGGGANATTVEAGFRIILQDPNVKAILINVFGGIVRCDRIANGVVEAYKSIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           I +P+++RL+G N   G ++I ESGL V +AI L +AA K+   ++G
Sbjct: 358 IRVPIIVRLQGTNAVEGAKIIDESGLKVASAITLKEAADKVQAVLQG 404


>gi|88608589|ref|YP_506145.1| succinyl-CoA synthetase, beta subunit [Neorickettsia sennetsu str.
           Miyayama]
 gi|123492186|sp|Q2GEF1|SUCC_NEOSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|88600758|gb|ABD46226.1| succinyl-CoA synthetase, beta subunit [Neorickettsia sennetsu str.
           Miyayama]
          Length = 392

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 201/399 (50%), Positives = 264/399 (66%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK---TLPGPLYVVKSQIHAGGRGKG 57
           MNIHEYQAK +LR   VP   G ++          K    L G ++ VK+QIHAGGRGK 
Sbjct: 1   MNIHEYQAKEILRVCGVPTPAGFLVQEDTETSEIAKSLARLGGKVFAVKAQIHAGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S++  I + +++LG  L+T QT P G +V  VY+E G  IL+E
Sbjct: 61  ----------GGVVICRSVEEAIDNTKKMLGMNLVTHQTSPAGQKVRKVYIEAGQSILKE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            YLS++VDR +  VA IAS +GGMDIEE+A+  P+KI K+ +D  IG++      +   L
Sbjct: 111 YYLSMVVDRENAKVAIIASEEGGMDIEEIARSTPEKIKKVFVDLSIGISDFHARKIGFEL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L          L   LY  F  +D S +EINPLI    G    LD+K++FDDNALYRH 
Sbjct: 171 GLSLAQIKQFTPLVKKLYALFVTRDASQVEINPLIANSKGEFIALDAKLNFDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D  ELRD+ EED +EIEA ++NL+YI ++G IGCMVNGAGLAMATMDIIK YG +PANFL
Sbjct: 231 DTLELRDLYEEDPKEIEAAKYNLNYIKMEGGIGCMVNGAGLAMATMDIIKYYGASPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+ ++V  AFKII+SD  V GIL+NIFGGIMRCD++ +GI++A K++ + +PLV+
Sbjct: 291 DVGGGANLEQVTNAFKIISSDKHVAGILVNIFGGIMRCDIIAEGIVAAAKDIGLTMPLVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G N   G ++I  SGLN++TA +LDDAAQKIV   +
Sbjct: 351 RLSGTNYSAGIKIIEGSGLNIVTASELDDAAQKIVKLTR 389


>gi|261868411|ref|YP_003256333.1| succinyl-CoA synthetase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413743|gb|ACX83114.1| succinyl-CoA synthetase beta chain (SCS-beta) [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 389

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 267/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++P+ +G+   +   A  AIK L G ++V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKQVFAEYDLPICRGIACKTADEAAEAIKQLKGDVWVTKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V + + + LG  L+T QT   G  +N +YVE+  +I RELYL
Sbjct: 58  -------GGVKLVRNEAEVRAFVDKWLGQRLVTFQTDANGQPINIIYVEETVNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS  GGMDIEEVA   P+ + K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRASQKVVFMASAAGGMDIEEVAAKTPELLHKVALDPLVGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F ++D+SLLEINPL++ K G+L  LD+KI  D NALYR LD+ 
Sbjct: 171 GDQINQFTHIFTQLAKMFVERDLSLLEINPLVVTKEGKLSCLDAKIVVDSNALYRQLDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+++ D+RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 TMHDITQSDAREALAELHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV +V +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNQVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGLN+I A  L DAA + + A  G
Sbjct: 351 GNNAPLGREILANSGLNIIAAKTLTDAAVESIKAANG 387


>gi|57100954|ref|XP_533767.1| PREDICTED: similar to Succinyl-CoA ligase [GDP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, betaG
           chain) (SCS-betaG) (GTP-specific succinyl-CoA synthetase
           beta subunit) [Canis familiaris]
          Length = 432

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 167/395 (42%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L    +V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKKLNAKEFVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --SSGLKGGVHLTKDPQVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+D++      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 155 AILMDQSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIMEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIILLKGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIF GI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFAGIVNCAIIANGITKACQELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV     +++ S L + +A+DL+DAA+K V +V
Sbjct: 395 GTNVHEARNILSNSRLPITSAVDLEDAAKKSVASV 429


>gi|152992172|ref|YP_001357893.1| succinyl-CoA synthetase subunit beta [Sulfurovum sp. NBC37-1]
 gi|189030222|sp|A6Q7S7|SUCC_SULNB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|151424033|dbj|BAF71536.1| succinyl-CoA synthase, beta subunit [Sulfurovum sp. NBC37-1]
          Length = 391

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 180/389 (46%), Positives = 245/389 (62%), Gaps = 12/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +  +Y VP  KG++  SV AA  A K L GP++VVK+QIHA         
Sbjct: 1   MNVHEYQAKQIFAEYGVPTPKGIMAESVDAAVEAAKELGGPIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     EILG TL+T QTGP G  V  +Y+EDGADI  E YL
Sbjct: 52  -GGRGLGGGVKLAKSLDEVRELADEILGMTLVTHQTGPEGKLVQKLYIEDGADIKDEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR   M   +AST+GGM+IE+VA++ P+KI  + +DP IG        L   L + 
Sbjct: 111 SVILDRKLEMPLIMASTEGGMNIEDVAENTPEKIITVPVDPTIGFQGFHGRELAFGLGIT 170

Query: 181 GQA-RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +A + +       LYK + DKD  ++EINPL+   +G    LD K+ FD++ALYR  +I
Sbjct: 171 DKAEQKNIITFAQKLYKLYMDKDAEMIEINPLVRTGSGEFLALDGKMGFDNSALYRQPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             +RD+SEED  E+EA ++ LSY+ALDG IGCMVNGAGLAM TMD I   GG PANFLDV
Sbjct: 231 AAMRDLSEEDPDEVEAAKYGLSYVALDGEIGCMVNGAGLAMGTMDTINHMGGTPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A+ + VA  F+II  + +VK I +NIFGGI+RCD +  GI+ A K   +++P+++RL
Sbjct: 291 GGSANAETVAKGFEIILKNPNVKAIFVNIFGGIVRCDRIANGIIEATKITDVHVPVIVRL 350

Query: 360 EGANVDIGNRLIAESGL-NVITAIDLDDA 387
           +G N      ++  + + N+I A DL D 
Sbjct: 351 DGTNAPEAAEILKNANISNLIVAEDLGDG 379


>gi|54308243|ref|YP_129263.1| succinyl-CoA synthetase subunit beta [Photobacterium profundum SS9]
 gi|81400057|sp|Q6LTB5|SUCC_PHOPR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|46912671|emb|CAG19461.1| putative succinyl-CoA synthase, beta subunit [Photobacterium
           profundum SS9]
          Length = 388

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 179/385 (46%), Positives = 245/385 (63%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGFACDTAQEAFEAAGRISTDKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVEIHDTKDGVKEFAQKWLGKNLVTFQTDAKGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQPYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N  +G++ +AESGLN+I A  L 
Sbjct: 351 GNNAPLGSKKLAESGLNIIAATSLT 375


>gi|116749138|ref|YP_845825.1| succinyl-CoA synthetase subunit beta [Syntrophobacter fumaroxidans
           MPOB]
 gi|189030223|sp|A0LIY8|SUCC_SYNFM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116698202|gb|ABK17390.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 388

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 199/398 (50%), Positives = 255/398 (64%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L +KY VP+ +G    +V  A++    L     VVK+QIHA         
Sbjct: 1   MKIHEYQAKQLFQKYGVPIPRGKAAFTVEEAKAVGAELGTFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V    + ILG TL+T QTGP G  V  + VE+G  I +ELYL
Sbjct: 52  -GGRGKGGGVKLAKSAAEVDQYAKGILGMTLVTHQTGPEGRLVKKLLVEEGLPIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L DR +  + F+AS  GGMDIEEVA   P+KI K+ IDPL+G        L   L L+
Sbjct: 111 SVLPDRGTSKIVFMASEAGGMDIEEVAAKTPEKIIKVFIDPLLGFKGFHANELAYGLNLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK   D D SL+EINPL++  + R+  LD KI+FDDNA+YRH DIQ
Sbjct: 171 PELIKQFNAMVAALYKLCTDYDCSLVEINPLVLTSDNRVIALDGKINFDDNAMYRHKDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           E RD+ EED  EIEA +  L+YI +  GNIG MVNGAGLAMATMDII+  G APANFLDV
Sbjct: 231 EYRDLDEEDPFEIEASKFELNYIKMPGGNIGNMVNGAGLAMATMDIIQQAGAAPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  ++V   F+II +D +VKG+LINIFGGI+RCD L  G++ A K+V I +P+V+R+
Sbjct: 291 GGGASAEQVENGFRIILADPAVKGVLINIFGGILRCDRLANGVVEAAKKVGIRVPVVIRM 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG NV+ G  ++A+SGLN+I A D+ DAAQKI    KG
Sbjct: 351 EGTNVEQGREILAKSGLNLINAKDVADAAQKIAAVAKG 388


>gi|254369720|ref|ZP_04985730.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122679|gb|EDO66808.1| succinyl-CoA synthetase beta chain [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 387

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/396 (49%), Positives = 266/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y + V KG+V  + + A  A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG+DIEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRKVTFMASTEGGVDIEEVAYNSPEKILKVEVDPLVGLQPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+   D        YKAF + D +L EINPL + +NG +  +D KI+ D NALYRH  +
Sbjct: 171 EGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+++E++A +H L+Y+AL+GNIGCMVNGAGLAMATMDII+LYGG PANFLDV
Sbjct: 231 LALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D +VK +LINIFGGI+RCD++ + I+ AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N + G +++A+SGL +I A  L DAA K+V ++
Sbjct: 351 EGNNAEKGAKILADSGLKLIPADGLADAADKVVKSL 386


>gi|319786169|ref|YP_004145644.1| succinyl-CoA synthetase subunit beta [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464681|gb|ADV26413.1| succinyl-CoA synthetase, beta subunit [Pseudoxanthomonas suwonensis
           11-1]
          Length = 389

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 182/396 (45%), Positives = 271/396 (68%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK LL +Y +PV  G V ++   A +A ++L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLLAEYGIPVPAGKVAATPDEAVAAAQSLGQGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   ++  V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTVDDVKAAAAKMLGTRMATYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  +++IAS++GG++IE+VA + P+KI  L +D + GV      ++   + L 
Sbjct: 111 SVLVDRGTRTISYIASSEGGVEIEQVAAETPEKIHTLNVDFVEGVQPYHGRNIGFQMGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  NLY+ F +KD+SL+E+NPL I+ +G L  LD K + DDNA +RH ++ 
Sbjct: 171 AKQAGQFANIMVNLYRLFNEKDLSLVELNPLAILDDGNLYALDGKFNSDDNANFRHKELV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ALRDKSQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|260459594|ref|ZP_05807848.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
 gi|259034396|gb|EEW35653.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 394

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 165/384 (42%), Positives = 246/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL +Y V V +G +  S   A    + + G  +V+K+Q+H+G RGK    
Sbjct: 1   MDIHEYQAKELLARYGVHVPRGGLAYSPEQATYRAREIGGGKWVLKAQVHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++ + + S    +LG  L+T+QTGP G  ++ +Y+E+  DI +ELY+
Sbjct: 58  -------GGIKLCANDEEISSAAEAMLGRKLVTQQTGPRGKLISRLYLEEAVDIAQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  +AS  GGM+IE++ +  P  I +  +DP +G+       +   L L 
Sbjct: 111 GFVLDRKEERVMIVASAAGGMEIEDIVEKAPDSILRTSVDPGVGMQRFQAREIAFGLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +   + Y+ F D D S+LEINPL++ ++G L  LD+K+SFD+NAL+R  +I 
Sbjct: 171 HDLIGKATETIFSCYQVFRDYDASMLEINPLVVTRDGSLIALDAKMSFDENALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC++NGAGLAMATMD+IK+ GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRETFASDRGLSYVGLDGNIGCIINGAGLAMATMDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA +F+ +  D +V+ IL+NIF GI RCD + +G++ A++EV +N+PLV+RL 
Sbjct: 291 GGASPERVAKSFRAVLGDKNVETILVNIFAGINRCDWVAEGVVKAIREVGVNVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G   + G R++A+SG  VI A  L
Sbjct: 351 GTKAEEGRRILADSGEAVIVADTL 374


>gi|149911919|ref|ZP_01900518.1| succinyl-CoA synthase, beta subunit [Moritella sp. PE36]
 gi|149805012|gb|EDM65040.1| succinyl-CoA synthase, beta subunit [Moritella sp. PE36]
          Length = 388

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 252/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G   +  H A +    + G  +V K Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYATNVPHEAAAFADKIGGDKWVAKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S + + +     LG  ++T QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVTSKEEITAFAEYWLGKNIVTYQTDAKGQPVSQILVEAAGDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AST+GG+DIE VA+  P+ I K  IDPL+G        L   L LQ
Sbjct: 111 GAVIDRGSRKVVFMASTEGGVDIETVAEQTPELIHKATIDPLVGAQPFQARELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F D DM+LLEINPLI+   G L  LD KI+ D NALYR   ++
Sbjct: 171 GAQIKQFTQIFMGLAKMFTDCDMALLEINPLIVTGAGDLVCLDGKITIDSNALYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D+++ED+RE  A +  L+Y+ALDG+IGCMVNGAGLAM TMDI+ ++GG PANFLDVG
Sbjct: 231 AMQDITQEDAREAHAAKFELNYVALDGSIGCMVNGAGLAMGTMDIVNIHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVAEAFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVQEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G  ++A+S LN+I A  L D
Sbjct: 351 GNNAELGRAVLAKSDLNIIAASSLTD 376


>gi|57524960|ref|NP_001006141.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           [Gallus gallus]
 gi|53130454|emb|CAG31556.1| hypothetical protein RCJMB04_7p8 [Gallus gallus]
          Length = 432

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 229/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  S   A  A + L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMADHGVTVQRFFVADSADDALEAAQRLKAKEIVLKAQILAGGRGKGTF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K+V    ++++G  L TKQT   G +V  V V +  +I RE Y 
Sbjct: 97  --NSGLKGGVHLTKDPKTVAQLAKQMIGYNLSTKQTPKDGVKVKKVMVAEALNISRETYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S QGG+DIEEVA   P+ IFK  ID   GV       +   L  +
Sbjct: 155 AILMDRACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGVQDHQALQMAKNLGFK 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 215 GPLQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++ ESGL + +A DL+D
Sbjct: 395 GTNVHEAQRILNESGLPITSASDLED 420


>gi|169632627|ref|YP_001706363.1| succinyl-CoA synthetase subunit beta [Acinetobacter baumannii SDF]
 gi|226734313|sp|B0VSL0|SUCC_ACIBS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169151419|emb|CAP00150.1| succinyl-CoA synthetase beta chain [Acinetobacter baumannii]
          Length = 388

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 278/397 (70%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y +PV +G++ ++   A +A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
                  GGV+V  S + VI     I+ + L+T QT   G  VN + V +    + RELY
Sbjct: 58  -------GGVKVAKSKEDVIEFANNIIRTRLVTYQTDANGQPVNSIIVAEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       +    Y+AF + D +L EINPL + +NG +  +D+K+  D NALYR   +
Sbjct: 171 KDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 387


>gi|115447367|ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group]
 gi|75261432|sp|Q6K9N6|SUCB_ORYSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|47847769|dbj|BAD21546.1| putative succinyl-CoA ligase (GDP-forming) beta-chain,
           mitochondrial precursor [Oryza sativa Japonica Group]
 gi|113536994|dbj|BAF09377.1| Os02g0621700 [Oryza sativa Japonica Group]
 gi|125540340|gb|EAY86735.1| hypothetical protein OsI_08117 [Oryza sativa Indica Group]
 gi|125582922|gb|EAZ23853.1| hypothetical protein OsJ_07569 [Oryza sativa Japonica Group]
 gi|215704850|dbj|BAG94878.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 422

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V +G    SV   ++ +K +       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +    +   S   ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 88  FK---SGLQGGVHIVK-AEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA ++GG  IE++A+ YP  I K+ ID   G+T +D A + D L 
Sbjct: 144 YFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    +    LY+ FC  D +LLEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 PKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFAMRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 420


>gi|71681082|gb|AAH99746.1| Suclg2 protein [Rattus norvegicus]
          Length = 429

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 168/386 (43%), Positives = 233/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F 
Sbjct: 35  LNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 95  ---SGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 152 AILMDRSHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 212 GSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 272 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 332 GGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLE 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 392 GTNVQEAQNILKSSGLPITSAVDLED 417


>gi|90411601|ref|ZP_01219611.1| succinyl-CoA synthetase subunit beta [Photobacterium profundum
           3TCK]
 gi|90327491|gb|EAS43844.1| succinyl-CoA synthetase subunit beta [Photobacterium profundum
           3TCK]
          Length = 388

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 179/385 (46%), Positives = 245/385 (63%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGFACDTAQEAFEAAGRISTDKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  +   V    ++ LG  L+T QT   G  V  + VE+ ++I  ELYL
Sbjct: 58  -------GGVEIHDTKDGVKEFAQKWLGKNLVTFQTDANGQPVTKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQPYQGRELAFKLGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD++VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDTNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N  +G++ +AESGLN+I A  L 
Sbjct: 351 GNNAPLGSKKLAESGLNIIAATSLT 375


>gi|13471373|ref|NP_102939.1| malate--CoA ligase subunit beta [Mesorhizobium loti MAFF303099]
 gi|21263794|sp|Q98KT9|MTKA_RHILO RecName: Full=Probable malate--CoA ligase subunit beta; AltName:
           Full=MTK-beta; AltName: Full=Malate thiokinase; AltName:
           Full=Malyl-CoA synthetase
 gi|14022115|dbj|BAB48725.1| succinyl-CoA synthetase beta subunit [Mesorhizobium loti
           MAFF303099]
          Length = 394

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 164/384 (42%), Positives = 246/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL ++ V V +G +  S   A    + + G  +V+K+Q+H+G RGK    
Sbjct: 1   MDIHEYQAKELLARHGVHVPRGGLAYSPEQATYRAREIGGGKWVLKAQVHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++ + + S    +LG  L+T+QTGP G  ++ +Y+E+  DI +ELY+
Sbjct: 58  -------GGIKLCANDEEISSAAEAMLGRKLVTQQTGPRGKLISRLYLEEAVDIAQELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  +AS  GGM+IE++ +  P  I +  +DP +G+       +   L L 
Sbjct: 111 GFVLDRKEERVMIVASAAGGMEIEDIVEKEPNSILRTSVDPGVGMQRFQAREIAFGLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +   + Y+ F D D S+LEINPL++ ++G L  LD+K+SFD+NAL+R  +I 
Sbjct: 171 HNLIGKATETIFSCYQVFRDYDASMLEINPLVVTRDGNLIALDAKMSFDENALFRRPEIS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S+ED RE  A    LSY+ LDGNIGC++NGAGLAMATMD+IK+ GG PANFLD+G
Sbjct: 231 ELRDKSQEDPRETFASDRGLSYVGLDGNIGCIINGAGLAMATMDMIKIAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA +F+ +  D +V+ IL+NIF GI RCD + +G++ A++EV +N+PLV+RL 
Sbjct: 291 GGASPERVAKSFRAVLGDKNVETILVNIFAGINRCDWVAEGVIKAIREVGVNVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G   + G R++A+SG  VI A  L
Sbjct: 351 GTKAEEGRRILADSGEAVIVADTL 374


>gi|262375858|ref|ZP_06069090.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           lwoffii SH145]
 gi|262309461|gb|EEY90592.1| succinyl-CoA synthetase subunit beta(SCS-beta) [Acinetobacter
           lwoffii SH145]
          Length = 388

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/397 (49%), Positives = 276/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL+KY +PV +G++ ++      A + L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLKKYGMPVQEGILATNADETVHAFEQLGGKFAVLKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S         +I+GS L+T QT   G  VN + V ED   + RELY
Sbjct: 58  -------GGVKVVKSATEAAEYANQIIGSRLVTYQTDVNGQPVNSILVSEDVYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L+L
Sbjct: 111 LGAVVDRSTRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLMPFQAREVAFALKL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +         +    Y+AF D D +L EINPL + +NG +  +D+KI  D NALYR  ++
Sbjct: 171 KDGQINQFVKVMTAAYQAFVDNDFALFEINPLSVRENGDILCVDAKIGIDSNALYRLPEV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII +D SV+G+LINIFGGI+RCD++ + I++AV+EV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKIILADHSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ESGL +I+A  L DAA+KIV AVK
Sbjct: 351 EGNNAELGAKLLDESGLKLISAHGLADAAEKIVAAVK 387


>gi|94676823|ref|YP_588570.1| succinyl-CoA synthetase, beta subunit [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|189046887|sp|Q1LTZ4|SUCC_BAUCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94219973|gb|ABF14132.1| succinyl-CoA synthetase, beta subunit [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 393

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 181/398 (45%), Positives = 254/398 (63%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK L  +Y +P+ KG+V ++ + A+ +I  +    ++VK Q+HAGGRGK    
Sbjct: 1   MKLHEYQAKMLFAQYGIPIPKGLVCTTPNEAKESIAVIGYGPWIVKCQVHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S + +    ++  G  LIT+QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVRIVRSKEEIQEFAKQWFGKHLITEQTNHIGQPVSKILVEAAIDIAQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR++  + FIAS QGG+DIE +AK+ P  + ++++DPLIG        L   + L 
Sbjct: 111 GCLVDRSNQCIKFIASIQGGIDIENIAKEKPHLLHQIILDPLIGPQLYQSRDLAFKIGLS 170

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +       +F  L   F +KD+ + EINPL+I + G L  LD K+  D NAL+R  ++
Sbjct: 171 SKKQINQFNKIFMGLATLFLEKDLVMAEINPLVITRLGDLICLDGKLHVDSNALFRQPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++ D S+ED  E  AKQHNL+YIAL+GNIGC+VNGAGLAM+T+D++K YGG PANFLDV
Sbjct: 231 CKMLDPSQEDKCETYAKQHNLNYIALNGNIGCLVNGAGLAMSTIDMVKFYGGEPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   Q+KV  AF+II SD  VK IL+NIFGGI+ CDV+ KGI++A  E  INIP+++RL
Sbjct: 291 GGRVTQEKVTKAFQIILSDKKVKVILVNIFGGIVCCDVIAKGIINARLESGINIPVIVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N   G + +  S LN+  A +L  AA++ V  V+G
Sbjct: 351 EGNNAKQGIQHLVNSILNIRIATNLTTAAKQAVALVEG 388


>gi|51260799|gb|AAH79367.1| Suclg2 protein [Rattus norvegicus]
          Length = 432

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 168/386 (43%), Positives = 233/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFD 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  ---SGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 395 GTNVQEAQNILKSSGLPITSAVDLED 420


>gi|146215968|gb|ABQ10186.1| succinyl-CoA ligase beta subunit [Caragana jubata]
          Length = 421

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 196/398 (49%), Positives = 264/398 (66%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V +GV +SS+     AIK +       VVKS+I AGGRG G 
Sbjct: 28  LNIHEYQGAELMSKYGVNVPRGVAVSSIEEVRKAIKDVFANQNEVVVKSRILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  +GGV +  +   V     ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 88  FK---SGLQGGVHIVKT-DQVEDLAGKMLGQILVTKQTGPQGKVVSKVYLCEKLSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFEGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G  R    +   NLYK F + D +LLEINP+    + +L   D+K++FDDNA YR   
Sbjct: 204 PKGADRNKSIEQVKNLYKLFVESDCTLLEINPIAETADNQLVAADAKLNFDDNAAYRQKG 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I +LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFKLRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+T+D  V+ IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGNASEGQVVEAFKILTADDKVEAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NVD G R++ ESGL +ITA DLDDAAQK V A K
Sbjct: 384 LEGTNVDQGKRILKESGLALITAEDLDDAAQKAVKAYK 421


>gi|59711432|ref|YP_204208.1| succinyl-CoA synthetase subunit beta [Vibrio fischeri ES114]
 gi|197334694|ref|YP_002155587.1| succinyl-CoA synthetase beta chain [Vibrio fischeri MJ11]
 gi|75354344|sp|Q5E6M6|SUCC_VIBF1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734996|sp|B5FC28|SUCC_VIBFM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|59479533|gb|AAW85320.1| succinyl-CoA synthetase, beta subunit [Vibrio fischeri ES114]
 gi|197316184|gb|ACH65631.1| succinyl-CoA synthetase beta chain [Vibrio fischeri MJ11]
          Length = 388

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 181/385 (47%), Positives = 249/385 (64%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR S  + F+AST+GG+DIE++A++ P+ I K  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRASQRIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFMGLGNMFAQYDLALLEINPLVVTAEGSLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N  +G++ +AESGLN+I A  L 
Sbjct: 351 GNNAPLGSQKLAESGLNIIAATSLT 375


>gi|302694909|ref|XP_003037133.1| hypothetical protein SCHCODRAFT_47353 [Schizophyllum commune H4-8]
 gi|300110830|gb|EFJ02231.1| hypothetical protein SCHCODRAFT_47353 [Schizophyllum commune H4-8]
          Length = 402

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 248/398 (62%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           ++IHEYQ+  LL  Y +P  KGV   +   A +A+K          VVK+Q+ AGGRGKG
Sbjct: 7   LSIHEYQSVQLLNSYGIPTPKGVPAKTKEEAVAALKQFQSEGKDSVVVKAQVLAGGRGKG 66

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F       KGGV + SS   V +   ++LG+ LITKQTG  G   N V + +  +   E
Sbjct: 67  MFDN---GFKGGVHMASSANEVENLAGKMLGAKLITKQTGERGRPCNTVMIAEAREPAHE 123

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+++L DR +  +  +AS QGGM+IEEVA   P  I    ID   G++ E+  ++   L
Sbjct: 124 YYVAVLNDRVTQGIVLVASAQGGMNIEEVAAKDPDAIITTPIDFDKGLSIEEGKAIAAKL 183

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             + + + +   +F NL K F +KD + +EINPL   K+G +  +D+K  FD+NA +R  
Sbjct: 184 GFKPELQAEAAGIFSNLVKIFKEKDATQIEINPLAETKDGAVLCMDAKFGFDENAEFRQK 243

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           DI  LRD+S+E+  E+EA +  L++I LDG+IGC+VNGAGLAMATMD++ L+GG PANFL
Sbjct: 244 DIFALRDISQEEPSEVEAAKAGLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFL 303

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA  D V  AF+++ SD  VK I INIFGGIMRCD + +G++ A KE+++ IPLV+
Sbjct: 304 DVGGGATPDTVKKAFELLLSDPKVKSIFINIFGGIMRCDYIAEGVIKATKELQMTIPLVV 363

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL+G        +I ESGL +I    LDDAA++ V   
Sbjct: 364 RLKGTKEAEAKAMIKESGLKIIAFDGLDDAAERAVQLA 401


>gi|323337464|gb|EGA78713.1| Lsc2p [Saccharomyces cerevisiae Vin13]
          Length = 427

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAXLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+L   LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G+  A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLXEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 426


>gi|190406750|gb|EDV10017.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Saccharomyces cerevisiae RM11-1a]
          Length = 427

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 161/399 (40%), Positives = 238/399 (59%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y +   +G    +   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 31  LSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGHFD 90

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +E+    LITKQTG  G  V+ VY+    D   E YL
Sbjct: 91  ---TGYKSGVHMIESPQQAEDVAKEMPHHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L   
Sbjct: 148 SILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFS 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
             A+ +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R  
Sbjct: 208 PDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQE 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFL
Sbjct: 268 KIYSWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V 
Sbjct: 328 DCGGGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVA 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL+G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 388 RLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 426


>gi|9955020|pdb|1EUC|B Chain B, Crystal Structure Of Dephosphorylated Pig Heart, Gtp-
           Specific Succinyl-Coa Synthetase
          Length = 396

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 169/394 (42%), Positives = 236/394 (59%), Gaps = 3/394 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F  
Sbjct: 3   NLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF-- 60

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL+
Sbjct: 61  -SSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLA 119

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   G
Sbjct: 120 ILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLG 179

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
             +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  
Sbjct: 180 PLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFA 239

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
           + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GG
Sbjct: 240 MDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGG 299

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           G  + +V  AFK++T+D  V+ IL+NIFGGI+   ++  GI  A +E+++ +PLV+RLEG
Sbjct: 300 GVKESQVYQAFKLLTADPKVEAILVNIFGGIVNXAIIANGITKACRELELKVPLVVRLEG 359

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 360 TNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 393


>gi|238926406|ref|ZP_04658166.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC
           43531]
 gi|304438123|ref|ZP_07398066.1| succinyl-CoA ligase subunit beta [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|238885810|gb|EEQ49448.1| succinate--CoA ligase (ADP-forming) [Selenomonas flueggei ATCC
           43531]
 gi|304368896|gb|EFM22578.1| succinyl-CoA ligase subunit beta [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 396

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 177/401 (44%), Positives = 254/401 (63%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   +V  A +  + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREFGVNVPNGLPAFTVDEAVANAEKLSTPVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V +  +E+LG TL+T QTGP G  VN + +E+G+ I +E YL
Sbjct: 58  -------GGVKIAKNKDEVRAYAQELLGKTLVTHQTGPEGKVVNRLLIEEGSKIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR +  +  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 111 SFVVDRQTASIVMMGSEEGGVEIEKVAAESPEKIIKEYIDPVIGLAPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      L   LY AF  KD S +EINPL++ ++  +  LD+K++FDD+AL+RH DI 
Sbjct: 171 GPAVRKAAALMQGLYAAFIGKDCSQVEINPLVVTEDDDVIALDAKLNFDDSALFRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E EA    L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 231 ELRDETEEDPKEREAAAAGLNYVNLGGDVACMVNGAGLAMATVDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G ++ +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSEPEKIAKAFSIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKIISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 351 VVRLEGTKVEEGREILKNTPIGNVFPAPTMEGGAEQIVKLV 391


>gi|90021748|ref|YP_527575.1| succinyl-CoA synthetase subunit beta [Saccharophagus degradans
           2-40]
 gi|123396049|sp|Q21IW6|SUCC_SACD2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89951348|gb|ABD81363.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Saccharophagus
           degradans 2-40]
          Length = 388

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 268/397 (67%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+   +   A +A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGIAAETPAEAAAAADIIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   +    ++ LG+ LIT QT   G  V+ + VE   DI  ELYL
Sbjct: 58  -------GGVKLVSSKAEIEEFAKKWLGNNLITYQTDENGQPVSRILVESCTDIADELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR++  V F+AST+GG++IE+VA++ P+KI K +IDPL G        L   L L 
Sbjct: 111 GAVVDRSTRRVIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQARELGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F DKD++LLEINPL+I   G L  LD+K++ D NA+YR   ++
Sbjct: 171 PVQIKQFTQIFLGLAKMFVDKDLALLEINPLVITDEGNLHCLDAKVAIDGNAMYRQPALK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A +  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK +LINIFGGI+RCD++ +G++ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVVEAFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++A+SGLN+I A  L DAA ++V A +G
Sbjct: 351 GNNAELGAKVLADSGLNIIAAESLTDAAVQVVKAAEG 387


>gi|196005415|ref|XP_002112574.1| hypothetical protein TRIADDRAFT_25488 [Trichoplax adhaerens]
 gi|190584615|gb|EDV24684.1| hypothetical protein TRIADDRAFT_25488 [Trichoplax adhaerens]
          Length = 416

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 243/394 (61%), Gaps = 3/394 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +IHE+Q+  LL ++ +   +  V ++         TL     VVK+Q+ AGGRGKG F+ 
Sbjct: 7   SIHEHQSMQLLDQHGIRTPQSRVATTPIQVHEVASTLGSKDVVVKAQVLAGGRGKGLFE- 65

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +  KGGV++  S     +    +LG  LITKQTG  G   N V V +     RE Y +
Sbjct: 66  --SGLKGGVKIAYSPDEAKTIAANMLGHKLITKQTGGAGVLCNKVMVSERLYPRREYYFA 123

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           + +D TS     IAS QGG+DIE VA + P+ I K  ID + G+  +   S+   +    
Sbjct: 124 ITMDPTSMGPIIIASNQGGVDIETVAAETPEAIIKQPIDIIEGLNRDTALSIARKVGFGP 183

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +      D+   LY  F + D  ++EINP+    NG +  +D+K+  D +AL+RH ++ E
Sbjct: 184 EYIDQATDIIQKLYSVFIENDALMVEINPMTEDSNGNVYCMDAKVKLDTSALFRHKNLAE 243

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
           LRD S+ED R++ A + +L+YI LDG+IGC+VNGAGLAM+TMDIIKL+GG PANFLDVGG
Sbjct: 244 LRDWSQEDPRDVAASKADLNYIGLDGSIGCLVNGAGLAMSTMDIIKLHGGLPANFLDVGG 303

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           GA  D+V  AF+II+SD  V  +L+NIFGGIMRCDV+ KGI++A  ++K+ IP+++RL+G
Sbjct: 304 GATADQVTQAFQIISSDQHVNAVLVNIFGGIMRCDVIAKGIVAAADQLKLKIPIIVRLQG 363

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             V+    +I  S  ++++  DLD+AA+  V   
Sbjct: 364 TRVEDAKAVIGASKFHILSCDDLDEAAKLAVKVA 397


>gi|196004012|ref|XP_002111873.1| hypothetical protein TRIADDRAFT_55336 [Trichoplax adhaerens]
 gi|190585772|gb|EDV25840.1| hypothetical protein TRIADDRAFT_55336 [Trichoplax adhaerens]
          Length = 426

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 167/396 (42%), Positives = 246/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+R + V V    + S+   A +  K +    +V+K+QI AGGRGKG F 
Sbjct: 34  LNLQEYQSKGLMRDHMVNVQPFEIASTPDEAIALAKKMNVDEFVIKAQILAGGRGKGHF- 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  K GV +   ++ + +   ++LG  LITKQT   G  V  + + +  DI +E Y 
Sbjct: 93  --TSGLKKGVHLTKDVEEIGNLASQMLGYRLITKQTPGEGVPVKKLMIAEALDISKETYF 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       +AS  GG+DIEEVA + P+ I+K+ ID + G+  +    L   L+  
Sbjct: 151 AIVMDRHYNGPVIVASPAGGVDIEEVAANSPELIYKVPIDIVDGINDQQALELAKNLKFS 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LY  F   D S +EINP     +GR+   D+KI+FDD+A YR  D+ 
Sbjct: 211 DSKVNEAAEQIKRLYNLFLSVDASQVEINPFGETTDGRVVCFDAKINFDDSAKYRQKDVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+SE D+REI A + NL+YI LDGNI C+VNGAGLAMATMDI+KL+GG PANFLDVG
Sbjct: 271 AMEDLSESDAREIAAAKSNLNYIGLDGNIACLVNGAGLAMATMDIVKLHGGEPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AF +++SD +VK IL+NIFGGI+ C  +  GI  A + + +N+P++ RLE
Sbjct: 331 GGVTEQQVYDAFNLVSSDKAVKSILVNIFGGIVNCATIANGITKAARGMNLNLPVIARLE 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD   +++ ESGLN+  A D +DAA+K V +++
Sbjct: 391 GTNVDEARKILLESGLNITPADDFEDAAKKAVASIQ 426


>gi|291393975|ref|XP_002713343.1| PREDICTED: succinate-CoA ligase, GDP-forming beta subunit
           [Oryctolagus cuniculus]
          Length = 432

 Score =  444 bits (1143), Expect = e-123,   Method: Composition-based stats.
 Identities = 168/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVANTASEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++  SGL + +A+DL+D
Sbjct: 395 GTNVQEAQRILNNSGLPITSAVDLED 420


>gi|209694427|ref|YP_002262355.1| succinyl-CoA synthetase subunit beta [Aliivibrio salmonicida
           LFI1238]
 gi|226734919|sp|B6EHV6|SUCC_ALISL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|208008378|emb|CAQ78533.1| succinyl-CoA synthetase beta chain [Aliivibrio salmonicida LFI1238]
          Length = 388

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/385 (47%), Positives = 248/385 (64%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVPEGYACDTAQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V    ++ LG  L+T QT   G  V  V VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDAKGQPVTKVLVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG+DIE++A++ P+ I +  IDPL+G  +     L   L L+
Sbjct: 111 GAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQAFQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L   F   D++LLEINPL++   G L  LD KI+ D NA+YR   ++
Sbjct: 171 GDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPKLR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A Q  L+Y+ALDG+IGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SDS+VK +L+NIFGGI+RCD++  GI+ AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N  +G++ +AESGLN+I A  L 
Sbjct: 351 GNNAPLGSQKLAESGLNIIAATSLT 375


>gi|9789854|sp|P53587|SUCB_NEOFR RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           hydrogenosomal; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|4688953|emb|CAB41451.1| beta-succinyl CoA synthetase precursor [Neocallimastix frontalis]
          Length = 437

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 176/399 (44%), Positives = 245/399 (61%), Gaps = 4/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL +YNV   KG+V  +   A  A K L     V+K+Q+ AGGRGKG F 
Sbjct: 28  LSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKLNTEDLVIKAQVLAGGRGKGHFD 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  + + V     ++LG  LITKQTG  G   N VYV +     RE Y 
Sbjct: 88  ---SGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYAAREYYF 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     +AS++GG++IEEVAK  P  I  +      G+T E        +   
Sbjct: 145 AILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVALDTAKKMGFT 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D F  LYK F +KD +++EINP+     G +  +D+K  FDDNA Y+   I 
Sbjct: 205 EKCVPQAADTFMKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKPKGIF 264

Query: 241 ELRDVSEEDSREIEAK-QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            LRD ++ED RE+    + NL+Y+ ++GNIGC+VNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 265 ALRDTTQEDPREVAGHAKWNLNYVGMEGNIGCLVNGAGLAMATMDIIKLNGGVPANFLDV 324

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   +V  AFKII+SD +V  IL+NIFGGIMRCD++ +G++ AVKE+ ++IPLV+RL
Sbjct: 325 GGSATAKQVKEAFKIISSDKAVSAILVNIFGGIMRCDIVAEGVIQAVKELGLDIPLVVRL 384

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +G  V+    LI  S L++    DLD AA+K+V     V
Sbjct: 385 QGTKVEEARELIKNSNLSLYAIDDLDKAAKKVVQLANVV 423


>gi|296447389|ref|ZP_06889315.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
 gi|296255092|gb|EFH02193.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
           OB3b]
          Length = 389

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/384 (47%), Positives = 243/384 (63%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL    V V  G V  S   A  A   L G  +VVK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASCGVAVPPGTVAFSPDQAVYAATELGGSHWVVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V    R++LG  L+T QTGP G  V  VYVE      RELYL
Sbjct: 58  -------GGIKLCRTYHEVQQAARDLLGKRLVTTQTGPEGKPVQRVYVELADPYERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS  GGM+IEE+AK  P  I +++++P +G+       L   L L 
Sbjct: 111 GFVLDRKLERVRVIASKHGGMEIEEIAKTDPDAILQVIVEPAVGLLPFQARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D ++LEINPL++ K+ ++  LD+K+SFDDNAL+R  +I 
Sbjct: 171 LKQVSRAVQSILGAYRAFRDNDATMLEINPLVVTKDDKVLALDAKMSFDDNALFRRRNIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +H+L+YI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMNDPSQSDPREAQALEHSLNYIGLDGEIGCIVNGAGLAMATMDMIKHAGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AF+++ SD++VK +L+NIF GI RCD + +G++ AVK   I  PLV+RL 
Sbjct: 291 GGASAERVATAFRLVLSDANVKVVLVNIFAGINRCDWVAQGVIDAVKATNITAPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV+ G +L+ ESG+NVITA  L
Sbjct: 351 GTNVEAGRKLLDESGINVITADSL 374


>gi|91776241|ref|YP_545997.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylobacillus
           flagellatus KT]
 gi|122985452|sp|Q1H031|SUCC_METFK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|91710228|gb|ABE50156.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methylobacillus
           flagellatus KT]
          Length = 387

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 201/386 (52%), Positives = 262/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALL++Y V V +  V  +  AA  A + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKALLQRYGVNVPRSQVAETAQAAVEAARALEGDAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V      +LG  L+T Q  P G  V  V VE    I RELY+
Sbjct: 58  -------GGVKLVRTLDEVQDIAVSLLGKRLVTYQNAPDGQPVEKVLVEATLPIARELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+   V  +AS  GGM+IEE+AKD P+KI + + DPL G+      ++   L L 
Sbjct: 111 SMLVDRSLERVVLVASAAGGMEIEEIAKDSPEKILQEVCDPLNGLVDYQARNIAFALGLV 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L   LY+ F + D++LLEINPLI+   G L  LD K+S DDNALYR  ++ 
Sbjct: 171 GDQVAAFTRLAKGLYRLFKENDLALLEINPLIVTAEGALVALDCKMSVDDNALYRRRELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD S++D++E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL+GGAPANFLDVG
Sbjct: 231 EQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    VA AFKII +D +VK IL+NIFGGIMRCD++ +GI++AVKEV I IP+V+RLE
Sbjct: 291 GGATATTVARAFKIILADPNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIEIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV++G ++++ESGL++I+A  L D
Sbjct: 351 GTNVELGRKMLSESGLSIISAAGLTD 376


>gi|75147005|sp|Q84LB6|SUCB_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; Short=SlSCoALbeta; Flags: Precursor
 gi|27803873|gb|AAO22150.1| succinyl CoA ligase beta subunit [Solanum lycopersicum]
          Length = 417

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 262/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV ++S+   + AI+ +       VVKSQ+ AGGRG G 
Sbjct: 24  LNIHEYQGAELMSKYGINVPKGVAVASLDEVKKAIQDVFPNQSEVVVKSQVLAGGRGLGT 83

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +            ++LG  L+TKQTG  G  V+ VY+ +   ++ E+
Sbjct: 84  FKN---GFQGGVHIVK-ADQAEDIASKMLGQILVTKQTGAQGKVVSKVYLCEKMSLVNEM 139

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+++DR +     IA  +GG  IE++A+ +P  I K+ ID   G++  D A + D L 
Sbjct: 140 YFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGISDADAAKVVDGLA 199

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LYK FC+ D ++LEINPL    + +L   D+K++FDDNA YR  +
Sbjct: 200 PKVADRNDSIEQVKKLYKLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQKE 259

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 260 IFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 319

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+T+D  VK IL+NIFGGIM+CDV+  GI++A K+V++ +P+++R
Sbjct: 320 VGGNATEGQVVEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVR 379

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 380 LEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKAL 416


>gi|225438067|ref|XP_002275953.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147782941|emb|CAN72294.1| hypothetical protein VITISV_037293 [Vitis vinifera]
 gi|297744178|emb|CBI37148.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 192/397 (48%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV + S+      I+ +       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMSKYGINVPKGVAVGSIEEVRKTIQDVFPKENELVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +  +   V     ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 88  FK---SGLKGGVHIVKT-DQVEELAGKMLGQILVTKQTGPQGKVVSKVYLCEKMSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR+S     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 144 YFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    +    LYK FC+ D +LLEINP+    + +L   D+K++FDDNA +R   
Sbjct: 204 PKVADRNASIEQVKKLYKLFCECDCTLLEINPIAETSDNQLVAADAKLNFDDNAAFRQKH 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDATQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+T+D  VK IL+NIFGGIM+CD++  GI++A KEV + +P+V+R
Sbjct: 324 VGGNASESQVVEAFKILTADDKVKAILVNIFGGIMKCDIIASGIVNAAKEVSLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 384 LEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKAS 420


>gi|288941230|ref|YP_003443470.1| succinyl-CoA synthetase subunit beta [Allochromatium vinosum DSM
           180]
 gi|288896602|gb|ADC62438.1| succinyl-CoA synthetase, beta subunit [Allochromatium vinosum DSM
           180]
          Length = 402

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 197/385 (51%), Positives = 254/385 (65%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK LLR+  + V  GV++    AA  A   L G  + VK+QIH+GGRGK    
Sbjct: 1   MNLHEFQAKQLLRERGLAVPDGVLVERPEAARDACVQLGGTRWAVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S +   S+ R +LGS L+T Q+GP G  V  V +E    I RELYL
Sbjct: 58  -------GGVVLVDSPEQAESETRRLLGSRLVTLQSGPDGLPVGSVLIERPTAIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  + F+AS  GGMDIE VA + P++I K+ + P++G        L   L L 
Sbjct: 111 SLLVDRASERLLFVASAAGGMDIETVAAETPERILKVALHPVVGFQPYKARRLGFGLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                  G L   LY+ F D D SL+EINPL++   G L  LD+KI+ DDNAL RH  + 
Sbjct: 171 ESQIKALGTLMDGLYRLFVDTDASLIEINPLVVTDTGELLALDAKITLDDNALMRHPALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE  A+ H+L+YI+LDGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ALRDPSQEDPREAAARAHDLNYISLDGNIGCMVNGAGLAMATMDLIKLQGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VA AFK+I SD  V  IL+NIFGGI+RCD++ +GI+ AV+EV +++P+V+RLE
Sbjct: 291 GGATAARVAEAFKLILSDPKVASILVNIFGGIVRCDLIAEGIIQAVREVGVSVPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N   G +L+A+SGL + TA +LD
Sbjct: 351 GTNAPQGLQLLADSGLALQTAGELD 375


>gi|83284007|gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 262/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV ++S+   + AI+ +       VVKSQ+ AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKYGINVPKGVAVASLDEVKKAIQDVFPNQSEVVVKSQVLAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +            ++LG  L+TKQTG  G  V+ VY+ +   ++ E+
Sbjct: 88  FKN---GFQGGVHIVK-ADQAEEIASKMLGQILVTKQTGAQGKVVSKVYLCEKMSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+++DR +     IA  +GG  IE++A+ +P  I K+ ID   G++ ED A + D L 
Sbjct: 144 YFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFKGISDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LY  FC+ D ++LEINPL    + +L   D+K++FDDNA YR  +
Sbjct: 204 PKVADRNDSIEQVKKLYNLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+T+D  VK IL+NIFGGIM+CDV+  GI++A K+V++ +P+++R
Sbjct: 324 VGGNATEGQVVEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 384 LEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKAL 420


>gi|254447516|ref|ZP_05060982.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           HTCC5015]
 gi|198262859|gb|EDY87138.1| succinyl-CoA synthetase, beta subunit [gamma proteobacterium
           HTCC5015]
          Length = 387

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 193/386 (50%), Positives = 259/386 (67%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+KAL + Y VPV +  V+S       A+  L     VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQSKALFQSYGVPVPQHRVVSDADDVARAVSELGSSRVVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S+K      R +LGS L+T QT   G  VN V VE  +DI  ELYL
Sbjct: 58  -------GGVKVVDSVKEATEAARAMLGSRLVTFQTDEDGQPVNQVLVEMPSDIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V  +AST+GG++IEEVA+  P+KI K  I+PL G+       L   L LQ
Sbjct: 111 GAVLDRASQRVVVMASTEGGVNIEEVAEKTPEKILKAEINPLTGLMPYQARELAFGLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   L + F +KD+SL+E+NPL+I   G L  LD KI+ D+NALYRH D+ 
Sbjct: 171 GDQIKQFGKIVGGLARLFVEKDLSLIEVNPLVITSEGDLVCLDGKINIDENALYRHADLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED RE  AK+  L+Y+AL+GNIGCMVNGAGLAMATMD++KL+GG PANFLDVG
Sbjct: 231 DLRDASQEDDRENRAKEWELNYVALEGNIGCMVNGAGLAMATMDLVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +V+ +L+NIFGGI+RCD++ +GI++AV+EV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKIILSDDNVQAVLVNIFGGIVRCDLIAEGIIAAVEEVGVEVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G+ L+ +S  N++ A  L D
Sbjct: 351 GNNAERGSELLNQSSFNILAAESLTD 376


>gi|109036827|ref|XP_001089976.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Macaca mulatta]
          Length = 432

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    ++++ SGL + +A+DL+D
Sbjct: 395 GTNVQEAQKILSNSGLPITSAVDLED 420


>gi|77164232|ref|YP_342757.1| succinyl-CoA synthetase, beta subunit [Nitrosococcus oceani ATCC
           19707]
 gi|254435636|ref|ZP_05049143.1| succinyl-CoA synthetase, beta subunit subfamily [Nitrosococcus
           oceani AFC27]
 gi|76882546|gb|ABA57227.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosococcus
           oceani ATCC 19707]
 gi|207088747|gb|EDZ66019.1| succinyl-CoA synthetase, beta subunit subfamily [Nitrosococcus
           oceani AFC27]
          Length = 389

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 176/386 (45%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK L   Y +PV  G    SV  A +  + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MILHEFQAKCLFSDYGIPVPSGGPAGSVEEARAWARKLGGERWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV SS + +      +LG+ L+T QT   G  V  + VE  A I RE YL
Sbjct: 58  -------GGVRVVSSAEELSGFCSHLLGTRLVTAQTDAAGLPVQSLLVEQPAAIAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  +DR    V  +AS++GG+DIE+VA  YP +I +L + P++G+       +     L 
Sbjct: 111 AATLDRQLERVVIMASSRGGVDIEQVAAKYPGEILRLAVHPIVGLQPYQCRRVGFAFGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   +Y+ F ++D +L+E+NPL++ + G L  LD+K+  DDNA +RH   +
Sbjct: 171 SEQRRQLVQIMEKMYRLFLERDANLVEMNPLVVTEQGDLLALDAKVVLDDNAAFRHAAWE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++E+ +E+EA+ H LSYIAL+G+I CMVNGAGLAMATMD+IKL  G PANFLDVG
Sbjct: 231 ALRDPTQENQKEVEARTHGLSYIALEGDIACMVNGAGLAMATMDLIKLQKGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+I +D+ VK IL+NIFGGI+RCD++ +GI+ A++EV+I +P+V+RLE
Sbjct: 291 GTATAERVTEAFKLILTDTKVKSILVNIFGGIVRCDLIAEGIIQAMQEVEIQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+ ESG+ +ITA +L D
Sbjct: 351 GTNAKQGRTLLRESGMKLITADNLTD 376


>gi|9955022|pdb|1EUD|B Chain B, Crystal Structure Of Phosphorylated Pig Heart,
           Gtp-Specific Succinyl-Coa Synthetase
          Length = 396

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 169/394 (42%), Positives = 236/394 (59%), Gaps = 3/394 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F  
Sbjct: 3   NLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF-- 60

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL+
Sbjct: 61  -SSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLA 119

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   G
Sbjct: 120 ILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLG 179

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
             +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  
Sbjct: 180 PLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFA 239

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
           + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GG
Sbjct: 240 MDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGG 299

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           G  + +V  AFK++T+D  V+ IL+NIFGGI+   ++  GI  A +E+++ +PLV+RLEG
Sbjct: 300 GVKESQVYQAFKLLTADPKVEAILVNIFGGIVNXAIIANGITKAXRELELKVPLVVRLEG 359

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 360 TNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 393


>gi|83814561|ref|YP_445252.1| succinyl-CoA synthetase beta chain [Salinibacter ruber DSM 13855]
 gi|123529069|sp|Q2S3H9|SUCC_SALRD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|83755955|gb|ABC44068.1| succinyl-CoA synthetase beta chain [Salinibacter ruber DSM 13855]
          Length = 392

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/399 (45%), Positives = 256/399 (64%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           M +HEYQAK L R Y V V  G+V  +V AA  A + L       L++VK+QIHA     
Sbjct: 1   MKLHEYQAKGLFRDYGVSVPDGIVAETVDAAVDAARRLEEENDATLFIVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S++ V      ILG  L+T QTGP G  V  + V +G DI +
Sbjct: 56  -----GGRGKGGGVKLAHSVEEVREHADNILGMDLVTHQTGPEGQTVRKILVTEGVDIDQ 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR + M A + ST+GG+DIE VA++ P+KI ++ +DP IG+       L   
Sbjct: 111 EYYLGVTLDRETSMNAIMVSTEGGVDIETVAEESPEKIQRVWVDPSIGLRPFQTRQLAFA 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L+G A          LY+AF + D +L EINPL+    G +  +D+K++ DDNAL+RH
Sbjct: 171 MGLEGDAFKQAVASIQGLYEAFEENDCTLAEINPLVQTPGGDIEAVDAKVNLDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++E+RD+ EED  E++A +H LSYI LDGN+GCMVNGAGLAMATMDIIKL GG PANF
Sbjct: 231 PDLEEMRDLHEEDPTEVKAGEHGLSYITLDGNVGCMVNGAGLAMATMDIIKLAGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V A F+II  D +V+ +L+NIFGGI+RCD + +G++ A K + I++PL+
Sbjct: 291 LDVGGAASAETVEAGFRIILEDPNVEALLLNIFGGIVRCDRVAQGVIEAAKNIDIDVPLI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G N + G RL+ ES L++ +A+ L +AA ++  A+
Sbjct: 351 VRLQGTNAEEGKRLLDESDLSLRSAVLLKEAADEVTAAL 389


>gi|328953556|ref|YP_004370890.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453880|gb|AEB09709.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Desulfobacca
           acetoxidans DSM 11109]
          Length = 385

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 191/395 (48%), Positives = 250/395 (63%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L  K+ VP+ +G + ++ H A    + + G  +VVK+QIHA         
Sbjct: 1   MKIHEYQAKQLFEKFQVPIPQGGMATTAHEAYEIAEGIGGDSFVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  VI+   +ILG TL+T QTGP G  V  + VE   DI +ELYL
Sbjct: 52  -GGRGKGGGVKVADSLSDVITLADQILGMTLVTHQTGPEGRLVKKILVEQALDIRQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DRT      + S  GGM+IEEVA   P+ I K  IDP +G+      +L   + L 
Sbjct: 111 GIVIDRTQARPVLMMSAAGGMEIEEVAARTPELIIKEAIDPAVGLQPFQTRNLVFGVGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       NLYK F   D SL+EINPL++  +G++  LD+K++FDDNAL+RH D+ 
Sbjct: 171 PMLLRTASGFINNLYKMFVAYDCSLVEINPLVVTTDGQMLALDAKVTFDDNALFRHKDLP 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +E D  E+EAK+HNL+YI LDG +G MVNGAGLAMATMD+IKL G  PANFLDVG
Sbjct: 231 PLEDPNEIDPLELEAKKHNLNYIRLDGTVGAMVNGAGLAMATMDLIKLAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D +A  F+II SD  VK ILINIFGGI+RCDVL +G++ A ++VK+ +P+++RLE
Sbjct: 291 GGASADMIANGFRIILSDPRVKAILINIFGGILRCDVLAEGVMEAARQVKVAVPIIIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N DIG  L+  SGLN   A D+ DAAQK+    
Sbjct: 351 GTNCDIGRNLLGASGLNFTVAGDMLDAAQKVAALA 385


>gi|310794504|gb|EFQ29965.1| succinate-CoA ligase [Glomerella graminicola M1.001]
          Length = 447

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 180/398 (45%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y V V KG V  S   A++  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 37  LSIHEYLSADLLRQYGVGVPKGSVAKSAAEAKAIAKEIGGEDMVIKAQVLAGGRGKGTFD 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 97  N---GLKGGVRVIYSPTEAEMFAEQMIGHKLITKQTGAGGKLCNSVYICERKFARREFYL 153

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT E    +   L   
Sbjct: 154 AILMDRASQAPVIVSSSQGGMDIETVAKENPDAIITTNIDINKGVTDEIARDIAVKLGFS 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA YR  DI 
Sbjct: 214 EQCIEDAKDTIQKLYKIFLEKDATQIEINPLSETSDHKVLCMDAKFGFDDNADYRQKDIF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL  G PANFLDVG
Sbjct: 274 ALRDTTQEDADEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNKGTPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF++ITSD  V  I +NIFGGI+RCD++ +G+++  KE+ + IP++ RL+
Sbjct: 334 GGATPAAIKEAFELITSDPKVSAIFVNIFGGIVRCDLIAQGLINTSKELNLKIPIIARLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+  + +I  S + + +  DL  AA+K V   K V
Sbjct: 394 GTNVEAAHEIINNSSMKIFSIDDLQTAAEKAVQLSKVV 431


>gi|114587760|ref|XP_516570.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial isoform 2 [Pan troglodytes]
          Length = 432

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFI 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|322790101|gb|EFZ15137.1| hypothetical protein SINV_15804 [Solenopsis invicta]
          Length = 940

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 184/405 (45%), Positives = 242/405 (59%), Gaps = 14/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 519 LNVHEHISYSLLNEAGVPTPKFGVAKTSDEAAKLAADLKTKDIVLKAQVLAGGRGKGHFK 578

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV++  + +   S   ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 579 GTNVS---GVKMCETPEEAKSLAGQMLGKLLITKQTGEGGRICNGVMVTQRMFPRKEYYL 635

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E    +   L L 
Sbjct: 636 AVMMERAFGGPVIIASSQGGVNIEEVAATNPTAIMYEPIDINKGITKEQAERIVSKLGL- 694

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL----------RVLDSKISFDD 230
              +    ++  NLY+ F  KD  LLE+NPL    NG              LD K  FDD
Sbjct: 695 DNVKDYISNMIINLYQMFLKKDALLLEVNPLAEDINGNCKFIFLFRLVNFALDCKCRFDD 754

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA +R  ++  LRD S+ED +E+EA + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+G
Sbjct: 755 NAEFRQKELFSLRDWSQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHG 814

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLDVGGGA    V  AFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A KE+ 
Sbjct: 815 GEPANFLDVGGGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKELS 874

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           + IP+V+RL+G NVD    LIA +GL ++   DLD+AA+  V   
Sbjct: 875 LKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAARVAVKLS 919



 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 165/393 (41%), Positives = 239/393 (60%), Gaps = 6/393 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+ A +LL++  +P     V  +   A +  K L     V+K+Q+ AGGR KG+FK+ 
Sbjct: 91  VHEHIAYSLLKEAGIPTPPFWVAKTPDEAANLAKNLKTKDLVLKAQVLAGGRAKGQFKDS 150

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV +    + V      ++G  LITKQTG  G   N V V       +E Y+++
Sbjct: 151 NVS---GVVIA---EQVKELAESMIGKVLITKQTGSAGKICNSVMVVARMFPRKEYYMAV 204

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +++RT      I S QGG++IE+VA   P+ +  L ID   G+T     S+ D L L G 
Sbjct: 205 MLERTFDGPVMIVSKQGGVNIEDVAATNPEAVAYLPIDVSKGLTPAQANSIADKLGLTGN 264

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
           ++     +  NLY+ F +KD  LLEINP      G    LD K  FDD+A +R  ++  L
Sbjct: 265 SKEIASLVASNLYELFVEKDALLLEINPFAEDICGEYYALDCKCKFDDSADFRQKELFAL 324

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D+++ D +E+EA++++L+YIAL GNIGCMVNGAGLAMATMDIIKLYGG PANFLDVGG 
Sbjct: 325 KDMTQMDPKEVEAEKYDLNYIALTGNIGCMVNGAGLAMATMDIIKLYGGTPANFLDVGGT 384

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + V   FKI++SD +V+ IL+NIFGGIMRCD++ +GI+ A +++ + IP+++RL+G 
Sbjct: 385 ATVETVTEGFKILSSDPNVEAILVNIFGGIMRCDIIAQGIIDATEQLNLKIPIIVRLQGT 444

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NV    +LI ++ L VI+  D   AA+  V   
Sbjct: 445 NVTKAKQLILDAKLKVISVDDFAQAAETSVKLA 477


>gi|224824504|ref|ZP_03697611.1| succinyl-CoA synthetase, beta subunit [Lutiella nitroferrum 2002]
 gi|224602997|gb|EEG09173.1| succinyl-CoA synthetase, beta subunit [Lutiella nitroferrum 2002]
          Length = 389

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 195/396 (49%), Positives = 271/396 (68%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY +PV +G++  S   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAKYGLPVQQGILAHSPEEAAAAYDKLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +      + ++G+ L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSREEAAEVAKTLIGTNLVTYQTDAAGQPVNSVLVCEDMYPVQRELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR S  V F+ ST+GG++IE+VA++ P+KI K+ ++PL+G+           L L
Sbjct: 111 LGAVVDRGSQRVVFMVSTEGGVEIEKVAEETPEKIIKVEVNPLVGMQPFQARDCAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+   +   L    Y+AF   D +L E+NPL + +NG L  +D KI+ D NALYRH ++
Sbjct: 171 SGKQVGEFTKLMLGAYEAFVANDFALFEVNPLALRENGELACVDGKINLDSNALYRHPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 LAQRDKSQENEREVKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D+SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVIEAFKLILADTSVKGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILDESGLKLTSAQGLNDAAEKIVAAV 386


>gi|45190396|ref|NP_984650.1| AEL211Wp [Ashbya gossypii ATCC 10895]
 gi|44983292|gb|AAS52474.1| AEL211Wp [Ashbya gossypii ATCC 10895]
          Length = 417

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 171/397 (43%), Positives = 245/397 (61%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEYQ+  LLR+Y +   +G   S+   A  A   L     VVK+Q   GGRGKG F 
Sbjct: 22  LSIHEYQSSELLRQYGIGTPRGQAASTAQQAYDAAAGLG-HELVVKAQALTGGRGKGHF- 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 + GV + SS +       ++LG+ LITKQ+G  G  V+ VYV +      E YL
Sbjct: 80  --NTGLQSGVHMISSAEEARELAEQMLGNRLITKQSGAKGKPVSAVYVVERVKARHEAYL 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     I S+QGGM+IEEVA   P  I K  +D   G+ +E  A++   L   
Sbjct: 138 SILMDRQTKKPLIICSSQGGMNIEEVAHSNPDAIKKFYVDVKKGLDAETAAAVARSLGFS 197

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG--RLRVLDSKISFDDNALYRHLD 238
            +A  D  D    LYK F +KD + +EINPL  ++    ++  +D+K  FDDNA +R  +
Sbjct: 198 QEAEADAADAVQKLYKIFREKDATQIEINPLSEVEGQHTKVMCMDAKFGFDDNASFRQQE 257

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD+++ED  E+ AK  +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFLD
Sbjct: 258 VYSWRDLTQEDPDEVVAKNSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 317

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AFK+I S++ VK I +NIFGGI+RCD + +G+++A K + + +P+V R
Sbjct: 318 CGGGATPETIETAFKLILSNTKVKAIFVNIFGGIVRCDYVAQGLVAATKNLDVKVPIVAR 377

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           L+G N++ G R+I ESGL +    +LD AA+K+V   
Sbjct: 378 LQGTNLEEGRRIIKESGLKIYGFDELDPAAEKVVGLA 414


>gi|294507118|ref|YP_003571176.1| Succinyl-CoA synthetase, beta subunit [Salinibacter ruber M8]
 gi|294343445|emb|CBH24223.1| Succinyl-CoA synthetase, beta subunit [Salinibacter ruber M8]
          Length = 392

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/399 (45%), Positives = 256/399 (64%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           M +HEYQAK L R Y V V  G+V  +V AA  A + L       L++VK+QIHA     
Sbjct: 1   MKLHEYQAKGLFRDYGVSVPDGIVAETVDAAVDAARRLEEENDATLFIVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV++  S++ V      ILG  L+T QTGP G  V  + V +G DI +
Sbjct: 56  -----GGRGKGGGVKLAHSVEEVREHAGNILGMDLVTHQTGPEGQTVRKILVTEGVDIDQ 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL + +DR + M A + ST+GG+DIE VA++ P+KI ++ +DP IG+       L   
Sbjct: 111 EYYLGVTLDRETSMNAIMVSTEGGVDIETVAEESPEKIQRVWVDPSIGLRPFQTRQLAFA 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           + L+G A          LY+AF + D +L EINPL+    G +  +D+K++ DDNAL+RH
Sbjct: 171 MGLEGDAFKQAVASIQGLYEAFEENDCTLAEINPLVQTPGGDIEAVDAKVNLDDNALFRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D++E+RD+ EED  E++A +H LSYI LDGN+GCMVNGAGLAMATMDIIKL GG PANF
Sbjct: 231 PDLEEMRDLHEEDPTEVKAGEHGLSYITLDGNVGCMVNGAGLAMATMDIIKLAGGEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A  + V A F+II  D +V+ +L+NIFGGI+RCD + +G++ A K + I++PL+
Sbjct: 291 LDVGGAASAETVEAGFRIILEDPNVEALLLNIFGGIVRCDRVAQGVIEAAKNIDIDVPLI 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G N + G RL+ ES L++ +A+ L +AA ++  A+
Sbjct: 351 VRLQGTNAEKGKRLLDESDLSLRSAVLLKEAADEVTAAL 389


>gi|165972309|ref|NP_035637.2| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           precursor [Mus musculus]
 gi|85681897|sp|Q9Z2I8|SUCB2_MOUSE RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|74189034|dbj|BAE39282.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 167/386 (43%), Positives = 232/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLED 421


>gi|321453347|gb|EFX64591.1| hypothetical protein DAPPUDRAFT_304522 [Daphnia pulex]
          Length = 450

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 180/395 (45%), Positives = 247/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEY +  LL++  + V K  V  S   A+  ++ L     VVK+Q+  GGRGKG FK
Sbjct: 41  LNVHEYVSYTLLQQEGITVPKFGVARSREEAQKIVEELDCLDVVVKAQVLTGGRGKGHFK 100

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV+   S +       +++G  LITKQTG  G   N V + +     RE Y 
Sbjct: 101 ---GGLKGGVKTVFSAEEAGDIASKMIGDLLITKQTGEKGRICNSVMITERKYQRREYYF 157

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAST GGM+IEEVA + P+ I    +D + G+T E    + D L L 
Sbjct: 158 TIMLERAYGGPVLIASTHGGMNIEEVAHENPEAIITEPVDIIKGLTKEQALLVADKLGLT 217

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R +  D+F  LY  F   D +++EINPL   ++G+L  LD+K+ FDDNA +R   + 
Sbjct: 218 -SKREEAADMFIKLYNLFIKYDATMIEINPLAEDQDGKLMCLDAKMRFDDNADFRQSTVF 276

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++E+S+E+EA + NL+YIALDG+I C+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 277 SYRDWTQENSQEVEAAKFNLNYIALDGDIACLVNGAGLAMATMDIIKLHGGEPANFLDVG 336

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI+ A  E+ I  P++ RL+
Sbjct: 337 GGATSAQVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIIAANELNIKTPIICRLQ 396

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA SGL ++   +LD+AA+  V   
Sbjct: 397 GTNVDEAKVLIANSGLKILPCDNLDEAARLAVKLS 431


>gi|74192578|dbj|BAE43068.1| unnamed protein product [Mus musculus]
 gi|74196736|dbj|BAE43106.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 167/386 (43%), Positives = 232/386 (60%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTTKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLED 421


>gi|189525094|ref|XP_001923821.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Danio rerio]
          Length = 432

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 168/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L++   V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V     ++LG  L TKQT   G  V  V V +  DI RE Y 
Sbjct: 97  --NSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISRETYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGGMDIEEVA   P+ IFK +ID   GV  +    +   L  +
Sbjct: 155 AILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQALRMAANLGFK 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D + +E+NPL     G++   D+KI+FDDNA +R   + 
Sbjct: 215 GPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +E D  E EA +++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 275 SMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++V AAFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R+++ESGL + +A DLDD
Sbjct: 395 GTNVHEAKRILSESGLPITSATDLDD 420


>gi|157779135|ref|NP_003839.2| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           isoform 2 precursor [Homo sapiens]
 gi|52788292|sp|Q96I99|SUCB2_HUMAN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|119585860|gb|EAW65456.1| succinate-CoA ligase, GDP-forming, beta subunit, isoform CRA_a
           [Homo sapiens]
 gi|119585861|gb|EAW65457.1| succinate-CoA ligase, GDP-forming, beta subunit, isoform CRA_a
           [Homo sapiens]
          Length = 432

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|33989739|gb|AAH56551.1| Suclg2 protein [Danio rerio]
          Length = 419

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 168/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L++   V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 25  LNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGGRGKGVF- 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V     ++LG  L TKQT   G  V  V V +  DI RE Y 
Sbjct: 84  --NSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISRETYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGGMDIEEVA   P+ IFK +ID   GV  +    +   L  +
Sbjct: 142 AILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQALRMAANLGFK 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D + +E+NPL     G++   D+KI+FDDNA +R   + 
Sbjct: 202 GPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +E D  E EA +++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+G
Sbjct: 262 SMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++V AAFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 322 GGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R+++ESGL + +A DLDD
Sbjct: 382 GTNVHEAKRILSESGLPITSATDLDD 407


>gi|332261159|ref|XP_003279643.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial isoform 1 [Nomascus leucogenys]
          Length = 432

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|313674827|ref|YP_004052823.1| succinyl-CoA synthetase, beta subunit [Marivirga tractuosa DSM
           4126]
 gi|312941525|gb|ADR20715.1| succinyl-CoA synthetase, beta subunit [Marivirga tractuosa DSM
           4126]
          Length = 403

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 187/405 (46%), Positives = 260/405 (64%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQAK +L KY V + KG+V  +   A  A K L        YV+K+QIHAGGRGK
Sbjct: 1   MNIHEYQAKGILEKYGVTIQKGIVADTPEEATEAAKKLNKETGTEWYVLKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL- 115
           G+ KE  ++   GV +  SL+ V    + ILG TL+T QTG  G  V+ + V        
Sbjct: 61  GKVKETDSN---GVVLAKSLEDVAPKSKAILGGTLVTHQTGEEGKLVSKLLVAQDVYYPG 117

Query: 116 ----RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+ +L+DR  G    +AST+GG+DIE+VA++ P KI K  IDP +G+      
Sbjct: 118 EHEPKEYYVGILLDRAKGCNVIMASTEGGVDIEDVAENTPDKIIKEWIDPRVGLQGFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G A  +      +LY A+   D S+ EINP++   + ++  +D+K++ DD+
Sbjct: 178 KVAFKLGLEGDAFKNMVKFIHSLYTAYDATDSSMFEINPVLKTSDNKILAVDAKVNLDDS 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ ++RD SEED  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 238 ALYRHKDLADMRDKSEEDPAEVEAAESGLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG A+ + V A F+II  D  V+ ILINIFGGI+RCD + KG++ A K +  
Sbjct: 298 DPANFLDVGGSANAETVEAGFRIILKDPKVEAILINIFGGIVRCDRVAKGVVEAYKNIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P+++RL+G N + G ++I +SGL V +AI L DAA ++  A+
Sbjct: 358 IKVPIIVRLQGTNAEEGAKIIEDSGLKVTSAIVLKDAALRVKEAL 402


>gi|188038847|gb|ACD47037.1| ASL1/Suclg2 fusion protein [Mus musculus]
          Length = 414

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 20  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 79  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + +     
Sbjct: 137 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENPGFL 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 197 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 257 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 317 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 377 GTNVQEAQNILKSSGLPITSAVDLED 402


>gi|296225621|ref|XP_002758579.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Callithrix jacchus]
          Length = 432

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKKLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +A+DL+D
Sbjct: 395 GTNVHEAQKILNNSGLPITSAVDLED 420


>gi|320166382|gb|EFW43281.1| succinate-CoA ligase [Capsaspora owczarzaki ATCC 30864]
          Length = 474

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 165/398 (41%), Positives = 242/398 (60%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  +L++  +   KG V  +   AE     L     V+K+Q+ AGGRGKG F+
Sbjct: 64  LSLHEYLSMDILQQNGIATPKGRVAKTPEEAEQVAAELGTEDIVIKAQVLAGGRGKGTFQ 123

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR   S          ++G  L+TKQTG  G   N VY+ +     RE Y 
Sbjct: 124 N---GLKGGVRTIYSPAEARMYAERMIGQRLVTKQTGAEGRVCNEVYICERLYARREYYF 180

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     + S+QGG+DIE VA + P  I K  ID   G++  +      ++   
Sbjct: 181 AILMDRATAGPLLVGSSQGGVDIETVAHENPDAIVKQAIDINKGLSEAEAIKFATLMGFS 240

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D  +    LY  F   D +++EINP+  + +G++  +D+K++FDDNA +R  ++ 
Sbjct: 241 PSCVRDAAENIIRLYNVFIKYDSTMVEINPMAEVSSGKVICMDAKLNFDDNAAFRQKEVF 300

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED RE+ A Q +L+YI LDG+IGC+VNGAGLAMAT+DIIKL+GG PANFLDVG
Sbjct: 301 ARRDYSQEDEREVRAAQADLNYIGLDGSIGCLVNGAGLAMATLDIIKLHGGNPANFLDVG 360

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +V  AFKII+SD  V  IL+NIFGGIMRCD++ +GI++A   + + IPL++RL+
Sbjct: 361 GGATAQQVTEAFKIISSDPKVTAILVNIFGGIMRCDIIAQGIIAAASTLDLRIPLIVRLQ 420

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V+    LI +SGL ++   +LD+AA++ V   + V
Sbjct: 421 GTRVNEAKELIDKSGLRIMLLNNLDEAAKRAVQVSQIV 458


>gi|307721036|ref|YP_003892176.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979129|gb|ADN09164.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfurimonas
           autotrophica DSM 16294]
          Length = 391

 Score =  441 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 184/386 (47%), Positives = 241/386 (62%), Gaps = 12/386 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  +Y VP  +G+V ++   A  A   L G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKQIFAQYGVPTPRGMVANTPDEAVKAAHELGGNIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V     EILG TL+T QTGP G  V  VY+E+GADI  ELYL
Sbjct: 52  -GGRGLGGGVKLAKSIEEVKELAGEILGMTLVTHQTGPEGKLVQKVYIEEGADIKDELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR   M   +AST+GGMDIE VA+  P+KI K+ IDP IG        L   L + 
Sbjct: 111 SVVLDRAQEMPIIMASTEGGMDIETVAEKTPEKIIKVTIDPSIGFQGFHGRELVFGLGIT 170

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
               +    D    LYK + DKD  ++EINPLI    G    LD K+ FDD+AL RH ++
Sbjct: 171 DKNEQRKMIDFASKLYKVYMDKDAEMIEINPLIKTGAGDFIALDGKMGFDDSALGRHPEL 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +++RD+SEED  E EA Q+ LSYIALDG IGCMVNGAGLAM TMD I   GG PANFLDV
Sbjct: 231 EDMRDISEEDPDEREASQYGLSYIALDGEIGCMVNGAGLAMGTMDTINYMGGTPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A+ + VA  F+II  + +VK I +NIFGGI+RCD +  GIL A K V +++P+++RL
Sbjct: 291 GGSANAETVAKGFEIILKNPNVKAIFVNIFGGIVRCDRIANGILEATKLVDVHVPVIVRL 350

Query: 360 EGANVDIGNRLIAESGL-NVITAIDL 384
           +G N      ++  + + NVI A DL
Sbjct: 351 DGTNAPEAAEILKNANIANVIAATDL 376


>gi|94970901|ref|YP_592949.1| succinyl-CoA synthetase subunit beta [Candidatus Koribacter
           versatilis Ellin345]
 gi|189046868|sp|Q1IJS5|SUCC_ACIBL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94552951|gb|ABF42875.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Koribacter versatilis Ellin345]
          Length = 392

 Score =  441 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 181/389 (46%), Positives = 245/389 (62%), Gaps = 13/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQ KA+LRKY V V +G ++++   AE     L        VVK+QIHA      
Sbjct: 1   MKIHEYQGKAILRKYGVAVPRGEMVTTREEAERVANDLMHDGAKGVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S+        +ILG TLIT QTGP G +V  + +E+   I RE
Sbjct: 55  ----GGRGKGGGVKIAKSVDEAGQLAGKILGMTLITHQTGPEGKKVQRLLIEETLPIERE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYLS+++DR++G   F+AS  GGM+IEEVA   P  I K  I+P  G+ +     +   L
Sbjct: 111 LYLSIVLDRSNGKPVFMASAAGGMEIEEVAAKDPNAIIKEWIEPGYGLGAFQARKIAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+ +           LYK + + D SL+EINP I   + RL  LD+K +FDDN L+RH 
Sbjct: 171 GLKPELIGQAVKFMQALYKTYDETDASLVEINPFITTSDNRLFALDAKFNFDDNGLFRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+++LRDV+EED  E+EA ++ L+YI LDG +GCMVNGAGLAMATMDII+  GG PANFL
Sbjct: 231 DLKDLRDVTEEDPLEVEASKYGLNYIKLDGTVGCMVNGAGLAMATMDIIQYAGGMPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+ ++V  AF+I+ SD +VK +LINIFGGI+R D L  G++ A  + KI +P+V+
Sbjct: 291 DVGGGANAEQVTHAFEILLSDKNVKAVLINIFGGILRVDTLATGVVQAATQTKIQLPIVL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDD 386
           RLEG NV+ G  ++ +SGLN I A  + D
Sbjct: 351 RLEGTNVEQGREILQKSGLNFIVAETMKD 379


>gi|126131926|ref|XP_001382488.1| succinate--CoA ligase (GDP-forming) beta chain (LSC2)
           [Scheffersomyces stipitis CBS 6054]
 gi|126094313|gb|ABN64459.1| succinate--CoA ligase (GDP-forming) beta chain (LSC2)
           [Scheffersomyces stipitis CBS 6054]
          Length = 414

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 171/395 (43%), Positives = 241/395 (61%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY++ ALL +Y V V KG   ++   A  A K L     V+K+Q   GGRGKG F 
Sbjct: 20  LSLHEYRSAALLEQYGVGVPKGYAATTAEGAFDAAKKLGTTELVIKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++ SS +       ++LG  LITKQTG  G  V  VY+ +  D L E Y+
Sbjct: 80  ---SGLQGGVKLISSPEEAKDLAAQMLGHKLITKQTGAAGKEVTAVYIVERRDALTEAYV 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR +     +AS+QGGMDIE VA + P+ I    +D   GVT +    +  +L   
Sbjct: 137 AILNDRAAQTPIIVASSQGGMDIEGVAAETPEAIHTFKVDLKEGVTDKLATEVASVLGYT 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +      NLYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 197 DAAIPEAAKAVQNLYKVFEEKDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED  E+EA ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGG PANFLD G
Sbjct: 257 NWRDPTQEDPEEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGKPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A    +  AF++I SD  V GI +NIFGGI+RCD + +G+++A K   ++IP+V+RL+
Sbjct: 317 GTATPATIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVVRLQ 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N+     LI  SGL +    DLD AA+KIV   
Sbjct: 377 GTNMQQAKELIDNSGLKLFAFEDLDPAAEKIVELA 411


>gi|3766203|gb|AAC64399.1| GTP-specific succinyl-CoA synthetase beta subunit [Mus musculus]
          Length = 404

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 10  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 69  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QG  DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 127 AILMDRSHNGPVLVGSPQGRSDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 187 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 247 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 307 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 366

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 367 GTNVQEAQNILKSSGLPITSAVDLED 392


>gi|19075966|ref|NP_588466.1| succinate-CoA ligase (beta subunit) [Schizosaccharomyces pombe
           972h-]
 gi|21264033|sp|O94415|SUCB_SCHPO RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
           beta, mitochondrial; AltName: Full=Succinyl-CoA
           synthetase beta chain; Short=SCS-beta; Flags: Precursor
 gi|4008575|emb|CAA22492.1| succinate-CoA ligase (beta subunit) [Schizosaccharomyces pombe]
          Length = 433

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 169/400 (42%), Positives = 236/400 (59%), Gaps = 9/400 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HEY +  +LRK+ V V +G    S   AE   + L     VVK+Q+ AGGRGKG+F   
Sbjct: 25  LHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDLKVTDLVVKAQVLAGGRGKGQFD-- 82

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +  +GGVR             +++G  LIT+QTGP G   N VYV +   I +E Y ++
Sbjct: 83  -SGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEYYFAI 141

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           L+DR +     +AS QGG+DIE VA + P  I K  +     +       L D L     
Sbjct: 142 LMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGFSSS 201

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
           ++    D    LYK F D D + +EINPL    + ++  +D+K++FDDNA +RH +I  L
Sbjct: 202 SKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSNIFVL 261

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           RD+S+ED  E  A +  L++I LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGG 
Sbjct: 262 RDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGN 321

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A+ + +  AF +IT+D     I +NIFGGI+RCDV+ KG++S V  + +NIP++ RL+G 
Sbjct: 322 ANAEAIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIICRLQGT 381

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKI------VHAVK 396
           N      +I  SGL + +  DLD+AA+K       V   +
Sbjct: 382 NQGAAKEVINNSGLRIFSFDDLDEAAKKACRFSRVVEMAR 421


>gi|46329889|gb|AAH68602.1| SUCLG2 protein [Homo sapiens]
          Length = 432

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSKAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 395 GTNVQEAQKILNNSGLPITSAIDLED 420


>gi|58616871|ref|YP_196070.1| succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Gardel]
 gi|75356991|sp|Q5FH54|SUCC_EHRRG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58416483|emb|CAI27596.1| Succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Gardel]
          Length = 386

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+++ + V +GV++ S++    AI  +   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKQILKRFGISVPEGVIVHSLNEVNDAINKINSKVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +L    + I+ +LGSTL+T QT   G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVIVSRTLDEAKTAIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +V+R  G ++ I ST+GG+DIEEVA + P+K+    IDP+ G       +LC    L 
Sbjct: 111 SAIVNRKHGQISIIFSTEGGVDIEEVAANSPEKVVTCNIDPIFGFQGFHGRNLCFDSNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +YK   + D S +EINPLI   +G    LD+K++FDDNA+YRH +I 
Sbjct: 171 VDQTRKITSIAKKIYKTMLETDASQIEINPLIETSSGDFIALDAKMNFDDNAIYRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEIPEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q  V  AFKII SD +V GIL+NIFGGIMRCD++  GI++A++E+ IN+PLV+RL 
Sbjct: 291 GGASQQTVTEAFKIILSD-NVDGILVNIFGGIMRCDIIANGIIAAIQEIGINVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +L+  S LN+ITA DL +AA  IV+ VK
Sbjct: 350 GTNFELGKKLLDNSKLNIITAHDLSEAAYDIVNIVK 385


>gi|241693179|ref|XP_002411799.1| succinyl-CoA synthetase, beta subunit, putative [Ixodes scapularis]
 gi|215504669|gb|EEC14163.1| succinyl-CoA synthetase, beta subunit, putative [Ixodes scapularis]
          Length = 425

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 170/397 (42%), Positives = 236/397 (59%), Gaps = 14/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIHAGGRGK 56
           +N+HE  +  LL+   V V K  V S+   AE   + L G    P+++  S +HA  + +
Sbjct: 6   LNLHENVSMQLLQDNGVNVPKFGVASTPDEAEEIAQRLGGSQETPVHIWFSHMHALVQRE 65

Query: 57  --GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
             G  + L    +                 ++LG  L TKQTG  G RV+ V V +    
Sbjct: 66  HVGTLRSLVCTHR--------PSEAKQISSQMLGYMLRTKQTGEKGIRVDKVMVTERLYN 117

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            RE Y +L+++R       +AS+QGG++IEEVAK+ P  I KL I    G+  ++ + L 
Sbjct: 118 RREYYFALMMEREFNGPLIVASSQGGVNIEEVAKENPDAILKLPISIDSGIDRDETSKLV 177

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
             L     A      L  NLY  F   D +LLEINPL+   +G++  LD+K  FDDNA +
Sbjct: 178 KQLGFHPSAVEGAVTLIENLYNVFLKYDATLLEINPLVEDNHGKVYCLDAKCRFDDNADF 237

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R  D+  LRD ++ D RE EA   NL+YIALDG+IGC+VNGAGLAMATMDIIKL+GG+PA
Sbjct: 238 RQKDLFALRDWTQLDEREREAHDCNLNYIALDGDIGCLVNGAGLAMATMDIIKLHGGSPA 297

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA   +V  AF++ITSD  V+ IL+NIFGGIMRCDV+ +G++ A + + + IP
Sbjct: 298 NFLDVGGGATAHQVTEAFRLITSDQKVQAILVNIFGGIMRCDVIAEGVIRAAETLDLKIP 357

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +V+RL+G  VD    LIA S L ++   +LD+AA+  
Sbjct: 358 IVVRLQGTQVDEAKALIATSKLKILACDNLDEAAKMA 394


>gi|192359200|ref|YP_001981994.1| succinyl-CoA synthetase beta chain [Cellvibrio japonicus Ueda107]
 gi|190685365|gb|ACE83043.1| succinyl-CoA synthetase beta chain [Cellvibrio japonicus Ueda107]
          Length = 403

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 184/385 (47%), Positives = 264/385 (68%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG+  ++V  A +A   + G ++VVK+Q+HAGGRGK    
Sbjct: 16  MNLHEYQGKQLFAQYGLPVSKGIAAATVEEAVAAADQIGGDMFVVKAQVHAGGRGKA--- 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   + +   + LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 73  -------GGVKLVKSKDEIKAFAEKWLGQRLVTYQTDEKGQPVSRILVETCTDIAKELYL 125

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG++IE+VA + P+KI K  IDPL+G        L   L L+
Sbjct: 126 GAVVDRSSRRIVFMASTEGGVEIEKVAHETPEKILKATIDPLVGAQPYQGRELAFKLGLE 185

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      ++F NL K F +KD++L+E+NPL+I   G L  LD+K+  D N++YRH +++
Sbjct: 186 GKQINQFVNIFVNLAKLFKEKDLALVEVNPLVITPEGNLHCLDAKLVVDSNSIYRHPELK 245

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D S+ED RE  A    L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 246 AMQDPSQEDPREAHAASWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 305

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFKII SD +VK + INIFGGI+RCD++ +G++ AVKEV + +P+V+RL+
Sbjct: 306 GGATKERVVEAFKIILSDDAVKAVFINIFGGIVRCDMIAEGVIGAVKEVGVKVPVVVRLQ 365

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G N ++G ++++ESGLN+I   DL 
Sbjct: 366 GNNAELGAKVLSESGLNIIADTDLT 390


>gi|3766199|gb|AAC64397.1| GTP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
          Length = 404

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 228/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 10  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 69  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QG  DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 127 AILMDRSCNGPVLVGSPQGRSDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 187 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 247 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 307 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 366

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    +++  SGL + +AIDL+D
Sbjct: 367 GTNVQEAQKILNNSGLPITSAIDLED 392


>gi|332977243|gb|EGK14038.1| succinyl-CoA ligase subunit beta [Psychrobacter sp. 1501(2011)]
          Length = 389

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 195/397 (49%), Positives = 267/397 (67%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +P+ KG++  +   A  A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKLLLESYGLPIQKGIIAYNGEEAAEAFDKTPTDVAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLAKTREEAKEIAESLIGTNLVTYQTDAEGQPVNFVLVAEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+KIF + +DPL+G+       +   L L
Sbjct: 111 LGAVVDRATRRVTFMASTEGGVEIEKVAEETPEKIFSITVDPLVGLLPFQAREVGFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    YKAF + D  ++EINPL + +NG L  +D KI  D NAL+R   I
Sbjct: 171 EGKQINQFVKLMTGAYKAFIENDFDMIEINPLAVRENGELACVDGKIGVDSNALFRQPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            EL D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AELHDPSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII  D SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVVEAFKIILEDESVKGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ES + VI+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAKLLDESDVKVISAQGLSDAAQKIVDAVK 387


>gi|57238883|ref|YP_180019.1| succinyl-CoA synthetase subunit beta [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578812|ref|YP_197024.1| succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Welgevonden]
 gi|81353045|sp|Q5HC25|SUCC_EHRRW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|57160962|emb|CAH57868.1| succinyl-CoA synthetase, beta subunit [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417438|emb|CAI26642.1| Succinyl-CoA synthetase beta chain [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 386

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 201/396 (50%), Positives = 265/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L+++ + V +GV++ S++    AI  +   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKQILKRFGISVPEGVIVHSLNEVNDAINKINSKVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +L    + I+ +LGSTL+T QT   G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVIVSRTLDEAKTAIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +V+R  G ++ I ST+GG+DIEEVA + P+K+    IDP+ G       +LC    L 
Sbjct: 111 SAIVNRKHGQISIIFSTEGGVDIEEVAANSPEKVVTCNIDPIFGFQGFHGRNLCFDSNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +YK   + D S +EINPLI   +G    LD+K++FDDNA+YRH +I 
Sbjct: 171 VDQTRKITSIAEKIYKTMLETDASQIEINPLIETSSGDFIALDAKMNFDDNAIYRHPEIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEIPEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q  V  AFKII SD +V GIL+NIFGGIMRCD++  GI++A++E+ IN+PLV+RL 
Sbjct: 291 GGASQQTVTEAFKIILSD-NVDGILVNIFGGIMRCDIIANGIIAAIQEIGINVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +L+  S LN+ITA DL +AA  IV+ VK
Sbjct: 350 GTNFELGKKLLDNSKLNIITAHDLSEAAYNIVNIVK 385


>gi|323136040|ref|ZP_08071123.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
 gi|322399131|gb|EFY01650.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
           49242]
          Length = 390

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 175/385 (45%), Positives = 244/385 (63%), Gaps = 11/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK +L  + V +  G V  S   A  A   L G  +VVK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKEILASHGVAIPPGTVAFSPDQAVYAATELGGSHWVVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    R++LG  L+T QTGP G  V  VYVE      RE+YL
Sbjct: 58  -------GGVKLCRTYHEVQQAARDLLGKRLVTSQTGPEGKPVQRVYVEVADPFEREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS  GGMDIEE+A+  P ++ +++++P +G+       L   L L 
Sbjct: 111 GYVLDRKLERVRVIASKHGGMDIEEIARTAPDELLQVIVEPAVGLQQFQARELAFQLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D ++LEINPL+I K+ ++  LD+K+SFDDNAL+R  +I 
Sbjct: 171 LKQVSRAVQTIMGAYRAFRDNDATMLEINPLVITKDDKVLALDAKMSFDDNALFRRRNIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D S+ D RE +A +H+L+YI LDG IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 DMNDPSQSDPREAQAAEHSLNYIGLDGEIGCIVNGAGLAMATMDMIKHAGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-IPLVMRL 359
           GGA  ++VA AF+++ SD  VK +L+NIF GI RCD + +G++ AV+  K+  +PLV+RL
Sbjct: 291 GGASPERVATAFRLVLSDRRVKVVLVNIFAGINRCDWVAQGVVDAVRAEKLEGVPLVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDL 384
            G NV+ G ++I+ESG+ +I A  L
Sbjct: 351 AGTNVEAGKKIISESGIPIIQADTL 375


>gi|148708892|gb|EDL40839.1| mCG49734 [Mus musculus]
          Length = 433

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 167/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAVSSPELIFKEQIDIFEGIKDSQAQRMAENLGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNITCFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     +   SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNIFKSSGLPITSAVDLED 421


>gi|51593317|gb|AAH80781.1| Succinate-Coenzyme A ligase, GDP-forming, beta subunit [Mus
           musculus]
          Length = 433

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+ ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 39  LNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 98  --NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + +     
Sbjct: 156 AILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENPGFL 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 216 GSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 276 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 336 GGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  SGL + +A+DL+D
Sbjct: 396 GTNVQEAQNILKSSGLPITSAVDLED 421


>gi|300114967|ref|YP_003761542.1| succinyl-CoA synthetase subunit beta [Nitrosococcus watsonii C-113]
 gi|299540904|gb|ADJ29221.1| succinyl-CoA synthetase, beta subunit [Nitrosococcus watsonii
           C-113]
          Length = 389

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/386 (45%), Positives = 250/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK L   Y +PV  G    S   A +  + L G  +V+K+Q+HAGGRGK    
Sbjct: 1   MILHEFQAKCLFSDYGIPVPSGGPARSAEEACAWARKLGGERWVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV +S++ +      +LG+ L+T QT  TG  V  + VE  A I RE YL
Sbjct: 58  -------GGVRVVASMEELSDFCSHLLGTRLVTAQTDATGLPVQNLLVEQPAAIAREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +  +DR    V  +AS++GG++IE+VA  YP +I +L I P++G+ S     +     L 
Sbjct: 111 AATLDRQLERVVIMASSRGGVNIEQVAATYPGEILQLAIHPVVGLQSYQCRRVGFAFGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +Y+ F ++D SL+E+NPL++ + G L  LD+K+  DDNA +RH   +
Sbjct: 171 SEQHRQLVQIMEKMYRLFLEQDASLVEMNPLVVTEQGDLLALDAKVVLDDNAAFRHATWE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++E+ +E+EA+ H LSYIAL+G+I CMVNGAGLAMATMD+IKL  G PANFLDVG
Sbjct: 231 ALRDPTQENQKEVEARTHGLSYIALEGDIACMVNGAGLAMATMDLIKLQHGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+I +D+ VK IL+NIFGGI+RCD++ +GI+ AV+EV+I +P+V+RLE
Sbjct: 291 GTATAERVTEAFKLILTDTKVKSILVNIFGGIVRCDLIAEGIIQAVQEVEIQLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+ ESG+ +ITA DL D
Sbjct: 351 GTNAKQGRALLRESGMKLITADDLTD 376


>gi|300176556|emb|CBK24221.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis]
          Length = 433

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 188/404 (46%), Positives = 258/404 (63%), Gaps = 11/404 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           +NIHE+Q+K L++KY      G V  S   ++     L    PG  +VVK+Q+ AGGRGK
Sbjct: 32  LNIHEWQSKQLIQKYGGRAQSGEVAYSPERSKDIALQLWNQFPGCKFVVKAQVLAGGRGK 91

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G ++      +GGV++  +   V +  +E++G  LITKQTG  G   N V V     IL+
Sbjct: 92  GHWEN---GMQGGVKLAKTPDEVYAIAQEMIGHKLITKQTGAKGINCNKVMVCGAVKILK 148

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL++L+DR  G    IA++QGGM IEEVA+  P+ +FK+ I    G T E +A L   
Sbjct: 149 EFYLAILLDRAMGCPMIIATSQGGMGIEEVAQKCPECLFKIPISVKNGPTKEQLAKLASD 208

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII----MKNGRLRVLDSKISFDDNA 232
           L LQG    D       LY  F   D +++EINPL +         +  LD+K+ FD++A
Sbjct: 209 LGLQGDLAKDCAANVQALYNVFDRCDCTMVEINPLGVIETPTDEQVVCCLDAKLQFDNDA 268

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R  DI  +RD S+ED R++ A    L+YI L+GNIGCMVNGAGLAMATMD I  +GG+
Sbjct: 269 EFRQRDIFAMRDKSQEDPRDVRASMAGLNYIGLEGNIGCMVNGAGLAMATMDTINYFGGS 328

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLDVGG A +++++ A +I+ SD+ VK ILINIFGGIMRCDV+ +GI+ A +E  ++
Sbjct: 329 AANFLDVGGNAKKEQISEALRILRSDAHVKSILINIFGGIMRCDVVAQGIVEAAREAALD 388

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           IPLV+RLEG NV+ G ++I ESGLN+I A DL DAA+K V +VK
Sbjct: 389 IPLVVRLEGTNVEKGKQIIKESGLNIIPADDLGDAAKKAVASVK 432


>gi|327266166|ref|XP_003217877.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like [Anolis carolinensis]
          Length = 424

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/386 (43%), Positives = 228/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 30  LNLQEYQSKKLMADHGVTVQRFFVADTANDALEAAKRLKATEIVLKAQILAGGRGKGVF- 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V     +++G  LITKQT   G +V  V V +  +I RE Y 
Sbjct: 89  --SSGLKGGVHLMKDPKEVGKLAEQMIGYNLITKQTPKDGVKVKKVMVAEALNISRETYF 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       + S  GG+DIEEVA   P+ IFK  ID   GV       L + L  +
Sbjct: 147 AILMDRACNGPVLVGSPAGGVDIEEVAATSPELIFKEEIDIFEGVKDTQALRLAENLGFK 206

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I 
Sbjct: 207 GPLKQQAADQIKKLYSLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIF 266

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA  ++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 267 AMDDKSENEPIENEAALYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLG 326

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 327 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 386

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV    R++ ESGL + +A DL+D
Sbjct: 387 GTNVHEAQRILNESGLPITSASDLED 412


>gi|325186785|emb|CCA21331.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 439

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/399 (44%), Positives = 255/399 (63%), Gaps = 7/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGK 56
           +N+HEYQ+  ++++Y + + +G+   +   A++A K + G       V+K+Q   GGRG 
Sbjct: 26  LNLHEYQSMDIMKEYGIRIPQGLPAQTPEEADNAYKQIVGNKSDADVVIKAQALTGGRGL 85

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F       KGGV + +  +   +   +++G TL+TKQTG  G +V  V + +   + R
Sbjct: 86  GHF---TNGFKGGVHMCTKPEDAKTFASKMIGHTLVTKQTGERGIQVAKVLLMERVYMRR 142

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y S+L+DR S     +AS  GG  IE+VA   P+ IFK +ID   G T + V  L + 
Sbjct: 143 EMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFKQVIDIQTGPTEDQVDFLVEK 202

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L    +++    ++  NLY  F   D +L+EINPL     G +   D+KI+FDDNA +RH
Sbjct: 203 LGCNAESKSKMAEMIRNLYNMFIGVDATLVEINPLAETPAGDVLACDAKINFDDNAAFRH 262

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            DI   RD ++ED RE+EA   +L+YI LDGNIGC+VNGAGLAMATMDII L+GG+PANF
Sbjct: 263 KDIFAKRDKTQEDPREVEASAFDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANF 322

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA + +V  AF+I+ +D  VK IL+NIFGGIMRCDV+  GI++A +++ +  P++
Sbjct: 323 LDVGGGATEAQVKKAFEILNADDQVKSILVNIFGGIMRCDVIAAGIIAAARDLDLEKPII 382

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G NV+   +LIA+SG  +I A +LDDAAQK V   
Sbjct: 383 VRLQGTNVEKARQLIADSGFKMIVADNLDDAAQKAVKIA 421


>gi|321476532|gb|EFX87492.1| hypothetical protein DAPPUDRAFT_306482 [Daphnia pulex]
          Length = 420

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/395 (46%), Positives = 250/395 (63%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K+LL KYNV V K +V   +    S +  L    YVVK+QI AGGRG G F 
Sbjct: 30  LNLLEYQSKSLLEKYNVTVQKFIVADKIEDTNS-LSKLNPGEYVVKAQILAGGRGLGVFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +        S + E+L   LITKQT   G  VN V V +  DILRE YL
Sbjct: 89  ---SGFKGGVHLTKDPVKAKSLVGEMLNKRLITKQTPKDGIPVNHVMVAESVDILRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE+VA   P+ I  L +D   GVT +    L + L  +
Sbjct: 146 CILMDREYNGPVIIASPAGGMDIEDVAHKTPELIKTLPVDIFEGVTDQMANDLAEFLLFK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +        NL++ F   D   +EINP +    G++  +D+KI FDDNA +R  +I 
Sbjct: 206 GDLKKKAAQEIKNLWEMFLKVDAVQVEINPFVETPQGQVVSVDAKIGFDDNAKFRQQEIF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D +E D RE+EA ++NL+YI +DGNIGC+VNGAGLAMATMDII+LYG +PANFLDVG
Sbjct: 266 DMEDTTECDPREVEANKYNLNYIGMDGNIGCLVNGAGLAMATMDIIQLYGASPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   + +V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI+ A K +++ +PL++RLE
Sbjct: 326 GTVQEQQVLQAFQILTSDKNVKAILVNVFGGIVNCATIASGIVGACKRIELKVPLIVRLE 385

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ +SGL + +A DLDDAA+K V ++
Sbjct: 386 GTNVDAAKQILKDSGLPIQSASDLDDAAKKAVASI 420


>gi|325954308|ref|YP_004237968.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Weeksella virosa
           DSM 16922]
 gi|323436926|gb|ADX67390.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Weeksella virosa
           DSM 16922]
          Length = 396

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 187/406 (46%), Positives = 255/406 (62%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQAK +L KY V V +G+V ++   A  A + L        +VVK+QIHA     
Sbjct: 1   MNLHEYQAKQILSKYGVKVQRGIVATTPDEAVEAAQELTKETGTSWHVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL+ V     +I+G  LIT QT P G +VN V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLEEVKEKATDIIGMQLITPQTPPEGKKVNQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              + E Y+S+L++R +G   F+ ST+GGMDIE VA+  P+KIF   IDP +G+T    A
Sbjct: 111 ESEIEEFYVSVLLNRATGRNMFMYSTEGGMDIEAVAEATPEKIFTEEIDPAVGLTGFQAA 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L ++G A  D       LY A+   D SL EINP++   + ++  +D+K+  D N
Sbjct: 171 NIAFNLGVKGAAYKDMIKFIHALYNAYIGIDASLFEINPVLKTSDDQIMAVDAKVVLDGN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+ ELRD  EED  E+EA    L+++ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALFRHKDLAELRDTREEDPTEVEADAAGLNFVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD ++V  AF+II  DS+VKGIL+NIFGGI+RCD + +GIL A K +  
Sbjct: 291 NPANFLDVGGTADAERVEKAFRIILKDSNVKGILVNIFGGIVRCDRVAQGILDAYKNLGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            IN+P+++RL+G N DI  ++I+ESGL V     L DAA K+   +
Sbjct: 351 SINVPIIVRLQGTNADIARQMISESGLQVHAVDTLQDAADKVAEIL 396


>gi|110638636|ref|YP_678845.1| succinyl-CoA synthetase subunit beta [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281317|gb|ABG59503.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Cytophaga hutchinsonii ATCC 33406]
          Length = 403

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 191/405 (47%), Positives = 260/405 (64%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQAK +L+KYNV + +G+   S  +A  A K L       ++VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQAKEILKKYNVKIGEGIYADSPESAVEAAKKLKEQTGTDIFVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
           G+F         GV +  S   V     ++LG+TL+T QTGP+G  V+ + V       G
Sbjct: 61  GKFV---GTEHRGVMIAKSYDEVKEKAAQMLGNTLVTIQTGPSGKVVSRLLVAADVYQKG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +ELYLS+L+DR +G    IAST+GGMDIEEVA   P  I K  +DP +G+      
Sbjct: 118 ASEPKELYLSMLLDRGTGQDVIIASTEGGMDIEEVAHSTPHLITKEFVDPAVGLQGFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   +  ++EINP++      +  +D+K+S DDN
Sbjct: 178 KIAFGLGLSGTAFKEMVTFVTRLYTAYKATNAEMIEINPVLKTSKDEILAVDAKVSIDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+   RDV+EED  E+EA + +L+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALFRHPDLAAYRDVTEEDPLEVEAAESHLNYVKLDGNVGCMVNGAGLAMATMDVIKLAGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGGGA+   V A F+II  D +VK ILIN+FGGI+RCD +  G++ A K +  
Sbjct: 298 EPANFLDVGGGANAKTVEAGFRIILKDPNVKAILINVFGGIVRCDRVANGVVEAYKNIGT 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           INIP+++RL+G N + G ++I ESGL V +A+ L DAA+ +  A+
Sbjct: 358 INIPIIVRLQGTNAEEGAKIINESGLKVRSAVILKDAAKLVTEAL 402


>gi|146231894|gb|ABQ13022.1| similar to Succinyl-CoA ligase [GDP-forming] beta-chain,
           mitochondrial precursor (Succinyl-CoA synthetase, betaG
           chain) (SCS-betaG) (GTP-specific succinyl-CoA synthetase
           beta subunit) [Bos taurus]
          Length = 432

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 230/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  +   A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTASEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +V  V V +  DI RE YL
Sbjct: 97  --SSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     +++ SGL + +A+DL+D
Sbjct: 395 GTNVHEAQNILSNSGLPITSAVDLED 420


>gi|21232524|ref|NP_638441.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767391|ref|YP_242153.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|24212431|sp|Q8P676|SUCC_XANCP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81306629|sp|Q4UXU0|SUCC_XANC8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21114315|gb|AAM42365.1| succinyl-CoA synthetase beta subunit [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|37784394|gb|AAP43026.1| SucC [Xanthomonas campestris pv. campestris]
 gi|66572723|gb|AAY48133.1| succinyl-CoA synthetase beta subunit [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 389

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 180/396 (45%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V S+   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F DKD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|114326716|ref|YP_743873.1| malate--CoA ligase subunit beta [Granulibacter bethesdensis
           CGDNIH1]
 gi|114314890|gb|ABI60950.1| succinyl-CoA synthetase beta chain [Granulibacter bethesdensis
           CGDNIH1]
          Length = 389

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 171/385 (44%), Positives = 244/385 (63%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL    V V +G +  S   A  A   L G  + VK+QIHAG RGK    
Sbjct: 1   MDVHEYQAKELLASAGVAVPRGAIAFSADQAVYAATELGGWHWAVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +   V      +LG  L+T QTGP G  V  VYVE      +E YL
Sbjct: 58  -------GGIKLCKTYHEVREAAAGMLGKRLVTHQTGPEGKPVQRVYVEVADPFEKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR    V  IAS +GGM+IEE+A  +P+K+ +++++P +G+       +   L L 
Sbjct: 111 GFVLDRKLERVRVIASAEGGMEIEEIASKHPEKLIQVIVEPAVGLQQFQARQIAFKLGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +            Y+AF D D ++LEINPL++ K+ R+  LD+K+SFDDNAL+R  ++ 
Sbjct: 171 SRQVQRAVTSIMGAYRAFRDHDATMLEINPLVLTKDDRILALDAKMSFDDNALFRRNNVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D S++D RE +A +HNL+Y+ L+G+IGC+VNGAGLAMATMD+IK  GG PANFLDVG
Sbjct: 231 NMHDPSQDDPREAQAAEHNLNYVGLEGDIGCVVNGAGLAMATMDVIKYAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++ A AF+++ SD +VK +L+NIF GI RCD + +G++ AVKEV + +PLV+RL 
Sbjct: 291 GGASPERTATAFRLVLSDKNVKVVLVNIFAGINRCDWIAEGVVHAVKEVDLKLPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G NV+ G R++ ESG++VI A  L 
Sbjct: 351 GTNVEEGRRILKESGISVIMAESLT 375


>gi|162457428|ref|YP_001619795.1| succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce
           56']
 gi|189030214|sp|A9GD65|SUCC_SORC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|161168010|emb|CAN99315.1| Succinate--CoA ligase (ADP-forming) [Sorangium cellulosum 'So ce
           56']
          Length = 398

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 200/402 (49%), Positives = 258/402 (64%), Gaps = 14/402 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           M IHEYQ K L  +Y VPV KG               L      P+ VVK+QIHAGGRGK
Sbjct: 1   MKIHEYQGKQLFARYGVPVPKGEPAFQASEVAPIADRLIAQTGNPVVVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G   ++                  +   +ILG  L+TKQTGP G +V  +Y+E G DI R
Sbjct: 61  GGGVKVAKGGSA---------EATALAEKILGMQLVTKQTGPEGQKVRRLYIEQGLDIAR 111

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELY ++LVDR    +A IAST+GGMDIEEVA   P+KI+KL IDP++G+       L   
Sbjct: 112 ELYFAMLVDRERRRIAVIASTEGGMDIEEVAHSTPEKIYKLFIDPVLGLAPYQGRQLAIA 171

Query: 177 LELQGQA-RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           L L  +  +     L  +LY  F  +D SLLEINPL++   G +  LD+K+SFDDNA +R
Sbjct: 172 LGLTAKETQRQFLKLVASLYACFTAEDCSLLEINPLVVTGAGDVFALDAKVSFDDNAEFR 231

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D   +RDV EED  E++AK+  LSY++LDG+IGC+VNGAGLAMATMDII  YGG PAN
Sbjct: 232 HADWNGMRDVDEEDPVELQAKRAGLSYVSLDGDIGCLVNGAGLAMATMDIILHYGGKPAN 291

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA Q++V  AF+II     V+GI +NIFGGIMRCDV+  G+++A KE+ + +PL
Sbjct: 292 FLDVGGGASQEQVKTAFQIILRSERVRGIFVNIFGGIMRCDVVAAGVIAAAKELGLKVPL 351

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           V+RLEG NV+ G +L+ ESGL + +A  + D AQKIV A +G
Sbjct: 352 VVRLEGTNVEAGRKLLDESGLTIQSASSMADGAQKIVAATRG 393


>gi|325981126|ref|YP_004293528.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Nitrosomonas sp.
           AL212]
 gi|325530645|gb|ADZ25366.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Nitrosomonas sp.
           AL212]
          Length = 393

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/394 (44%), Positives = 253/394 (64%), Gaps = 10/394 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L +Y V +A+G +  SV  A    + + G ++VVK+QIH+G RGK    
Sbjct: 1   MNIHEYQAKEILAEYGVKIAEGGLAYSVVEAVQRAREIEGDVWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  +   V   + E++G  L+T QTGP G   + +YVE G  I +E+YL
Sbjct: 58  -------GGIKVCRTHTEVEQAVEELIGKKLVTHQTGPAGKICSRIYVEAGTHISKEMYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR S  V  I + +GGM+IE++A+  P+ I K+ I+P +G+       +   L + 
Sbjct: 111 SFMIDRASERVIMIGAAEGGMEIEKLAETNPEAIIKIYIEPAVGLQDFQARKMAFGLGID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                         Y+A  D D ++LEINPL+I  N  +  LD+K+ FD+NAL+R   I 
Sbjct: 171 PAQLNHAVKTIKGCYRALRDLDANVLEINPLVITANNEIVALDAKMVFDENALFRRHKIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ D RE+ A +  LSY+ LDG+IGCM+NGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 ELRDNTQVDPREVAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++   AF+++ +D++VK +L+NIF GI RCD + +G++ AVK + + IPLV+RL 
Sbjct: 291 GGASAERTEKAFRLVLADANVKAMLVNIFAGINRCDWIAEGVVQAVKNIDMKIPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G NV+ G  +I  SGL +ITA  L +AA+K+V A
Sbjct: 351 GTNVEEGRSIIKNSGLPIITADTLAEAAEKVVRA 384


>gi|332372528|gb|AEE61406.1| unknown [Dendroctonus ponderosae]
          Length = 450

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 237/395 (60%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ +  LL+   + V    V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 41  LNVHEHVSYTLLKDAGITVPNFGVAKTKQEARQIAEKLNTKDLVLKAQVLAGGRGKGSFK 100

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S         ++LG  L+TKQTG  G   N V V +     +E Y 
Sbjct: 101 N---GLKGGVRMVYSPDEAEDISGQMLGQYLVTKQTGEKGRICNAVMVAERKFPRKEFYF 157

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    +D   G+T E    +   + L+
Sbjct: 158 AVMMERAFAGPVIIASSQGGVNIEEVAAENPDAILYEPVDVTKGLTKEQAEKVAVKVGLE 217

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++   +Y  F  KD  L+EINP       +   LD+K  FDDNA +R  D+ 
Sbjct: 218 -SQKEKTAEMLLRMYDLFVKKDALLIEINPYAEDAGEKYFSLDAKFRFDDNAAFRQKDLF 276

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+ A + +L+YIALDGNIGCMVNGAGLAMATMDII L+GG+PANFLDVG
Sbjct: 277 ALRDWTQEDEKEVAASKFDLNYIALDGNIGCMVNGAGLAMATMDIISLHGGSPANFLDVG 336

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P+V RL+
Sbjct: 337 GGATASAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELSLKMPIVCRLQ 396

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA SGL ++   +LD+AA+  V   
Sbjct: 397 GTNVDDAKVLIASSGLKILPVDNLDEAARLAVKLS 431


>gi|291231475|ref|XP_002735690.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit-like
           [Saccoglossus kowalevskii]
          Length = 430

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 257/398 (64%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE+ +  +LR  +V + KG V +S   A    K L     V+K+Q+ AGGRGKG F 
Sbjct: 19  LSVHEHYSMKILRDNDVTIPKGYVANSAEDALRVSKKLGAEDLVIKAQVLAGGRGKGTFD 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  + + + S   +++G+ LITKQTG  G   N VY+ +     RE Y 
Sbjct: 79  N---GFKGGVKIAFTPEEIQSFASKMIGNKLITKQTGKNGRICNEVYICERLYSRRETYF 135

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DRT      IAS+QGG++IEEVA+D+P+ I    ID   G++ ED   + + +   
Sbjct: 136 AITMDRTHSGPVIIASSQGGVNIEEVARDHPEAIVTHPIDVTQGLSKEDALMIAEKVGFS 195

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +++    D F  LY  F  +D +++EINP+     G++  +D+K +FDDNA +R  ++ 
Sbjct: 196 TKSQEHAADSFMKLYDVFISRDATMIEINPMTEDSQGKVYCMDAKFNFDDNAAFRQKEVF 255

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED RE+EA + NL+YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 256 SFRDWSQEDEREVEASKFNLNYIQLDGDIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 315

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AF +ITSD  V  I++NIFGGIMRCD++ +GI++A +E+ +N+PLV+RL+
Sbjct: 316 GGATAEQVKEAFHLITSDPKVAAIMVNIFGGIMRCDIIAQGIIAAAEELNLNVPLVIRLQ 375

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  VD    LIA S L ++   +LD+AA+  V   K V
Sbjct: 376 GTQVDDARALIASSKLRILACSELDEAAKMAVRLSKIV 413


>gi|77736229|ref|NP_001029811.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           precursor [Bos taurus]
 gi|91208175|sp|Q3MHX5|SUCB2_BOVIN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial; AltName: Full=GTP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-G chain; Short=SCS-betaG; Flags:
           Precursor
 gi|75773452|gb|AAI04560.1| Succinate-CoA ligase, GDP-forming, beta subunit [Bos taurus]
 gi|296474979|gb|DAA17094.1| succinate-CoA ligase, GDP-forming beta subunit precursor [Bos
           taurus]
          Length = 432

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 231/386 (59%), Gaps = 3/386 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    K V    ++++G  L TKQT   G +V  V V +  DI RE YL
Sbjct: 97  --SSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFL 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     +++ SGL + +A+DL+D
Sbjct: 395 GTNVHEAQNILSNSGLPITSAVDLED 420


>gi|224065571|ref|XP_002301863.1| predicted protein [Populus trichocarpa]
 gi|222843589|gb|EEE81136.1| predicted protein [Populus trichocarpa]
          Length = 421

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 266/397 (67%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV ++S+H  + A++ +       VVKSQ+ AGGRG G+
Sbjct: 27  LNIHEYQGAGLMGKYGINVPKGVAVASLHHVQKALQYVFPSESELVVKSQVLAGGRGLGK 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +  +   V     ++LG  L+TKQTG  G  V+ VY+ +   ++ E+
Sbjct: 87  FKN---GFQGGVHIVKT-DKVEETAGKMLGQILVTKQTGSQGKIVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++++DRT+     IA  +GG  IE++A+ +P  I K+ ID   G+T ED   + D L 
Sbjct: 143 YFAIMLDRTTAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDAVKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R D  +    LYK FC+ D +LLEINP+    + +L   D+K++FDDNA +R  +
Sbjct: 203 PKVADRNDSIEQVKKLYKLFCESDCTLLEINPIAETSDKQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 IFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A +++V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 323 VGGNASEEQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 383 LEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKAS 419


>gi|326527793|dbj|BAJ88969.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 422

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 258/397 (64%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ K+ + V +G V+ SV   +  +K +       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMGKFGINVPRGAVVGSVQEVKEVLKNVFPSEKEIVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +    +       ++L   L+TKQTGP G  V  VY+ +   ++ E+
Sbjct: 88  FK---SGLKGGVHIVK-AEEAEGLAAKMLNQVLVTKQTGPQGKVVGKVYLCEKMSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR +     IA  +GG  IE++A+ +P KI K+ +D   G+T ED A + D L 
Sbjct: 144 YFAITLDRKTAGPLIIACAEGGTSIEDLAEKFPDKIVKVPVDVFKGITDEDAAKVVDGLA 203

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    +    LY+ FC  D ++LEINPL    + +L   D+K++FDDNA +R  +
Sbjct: 204 PKTADRQSSIEQIKKLYELFCKTDCTMLEINPLAETADKKLVAADAKLNFDDNAAFRQKE 263

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 264 IFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 324 VGGSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NVD G R++ ESG+ +ITA DLDDAA+K V A 
Sbjct: 384 LEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAS 420


>gi|159045032|ref|YP_001533826.1| malate--CoA ligase subunit beta [Dinoroseobacter shibae DFL 12]
 gi|157912792|gb|ABV94225.1| succinyl-CoA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 392

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 169/384 (44%), Positives = 247/384 (64%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHE+QAK +L ++ VPV KG V  S   A    + L G   VVK+Q+H+GGRG+    
Sbjct: 1   MDIHEHQAKDILARFGVPVPKGGVAFSPEQAAFRCRELGGGRCVVKAQVHSGGRGEA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++      V      +LG++L+TKQT   G R++ ++VE+ + I RELYL
Sbjct: 58  -------GGVKLCEGEAEVRDFAASLLGTSLVTKQTDAAGKRIDRLWVEEASAIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS  GGM+IE++A++ P+ + ++++DP +G+       L   L LQ
Sbjct: 111 GFVLDRKSERIMIVASGHGGMEIEDLAEEDPESLIRMVLDPAVGLAEYQARELAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +    Y+A+ D D  ++EINPL++ K+  L  LD+K+SFD NAL+R  +I 
Sbjct: 171 GAQIGQMVTVLKACYRAYRDLDAMMVEINPLVVCKDSSLVALDAKMSFDTNALFRRAEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  +ED RE  A  H L+Y+ LDG+IGC++NGAGLAMA+MD+I+L GG PANFLD+G
Sbjct: 231 ALRDPGQEDPRESFAADHGLAYVGLDGDIGCIINGAGLAMASMDMIQLAGGEPANFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  AF+ + SD +V  IL+NIF GI RCD +  G++ A  E+ I +P+V+RL 
Sbjct: 291 GGASPERVCQAFRTVLSDQNVSVILVNIFAGINRCDWIANGVIKAYTELGIELPVVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV+ G +LIAESGL +I+A  L
Sbjct: 351 GTNVEAGRKLIAESGLPIISADTL 374


>gi|153006562|ref|YP_001380887.1| succinyl-CoA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5]
 gi|152030135|gb|ABS27903.1| succinyl-CoA synthetase, beta subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 392

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 194/384 (50%), Positives = 260/384 (67%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK LLR + V V +G + ++   AE A   L  P+  +K+QIHAGGRGK    
Sbjct: 1   MRIHEYQAKELLRGFGVTVLRGGLATTPADAELAAAVLDTPICAIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +        +LG  L+T QTGP G RV  +YVE+G  I RELYL
Sbjct: 58  -------GGVKLARSPEEARDHAEAMLGMVLVTAQTGPAGQRVRKLYVEEGCRIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + VDR +G V  +AS +GG++IEEVAK +P++I +  +DPL G+ +     L   L L+
Sbjct: 111 GMTVDRETGRVTIMASREGGVEIEEVAKLHPERILRAEVDPLTGLQANQARGLAFGLGLR 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   LY+A+   D SL E+NPL++   G L  LD+K+  DDNAL+RH D+ 
Sbjct: 171 GEVASKFVKLAAGLYRAYVATDASLAEVNPLVVTAEGELVALDAKLELDDNALHRHPDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EE  RE+EAK+H+LSY+AL+G+I CMVNGAGLAM TMD+I+L GG PANFLDVG
Sbjct: 231 ALRDPDEEQQRELEAKEHDLSYVALEGDIACMVNGAGLAMGTMDMIQLAGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA + KVAAAFKI+ +D  V+ +L+NIFGGIM+CDV+ KGIL+A + V +++PLV+RLE
Sbjct: 291 GGASEAKVAAAFKILLADPGVRAVLVNIFGGIMKCDVIAKGILAAARHVNLSVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G  L+A+S L +I A DL
Sbjct: 351 GTNVELGKELLAQSDLEIIPADDL 374


>gi|294460503|gb|ADE75828.1| unknown [Picea sitchensis]
          Length = 425

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 190/388 (48%), Positives = 254/388 (65%), Gaps = 6/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT--LPGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ  +L+ KY V V KG+V+SSV   + AI+         VVKSQ+ AGGRG G 
Sbjct: 31  LNIHEYQGASLMSKYGVNVPKGIVVSSVAEVKQAIRDAFPGEKEVVVKSQVLAGGRGLGT 90

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +   +        ++LG  LIT+QTGP G  VN VY+     +  E+
Sbjct: 91  FKN---GFEGGVHIAK-IDEAEDIAAKMLGQILITRQTGPEGKPVNKVYICQKLSLANEM 146

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR S     I+ ++GG  IE++A+ YP  I K+ ID   G+T ED A + + L 
Sbjct: 147 YFAITLDRVSAGPVIISCSKGGTSIEDLAEKYPDMIIKVPIDIFKGITDEDAAKVVEGLA 206

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R    D    LY  F + D +LLEINP+    +G+L   D+K++FDDNA YR  D
Sbjct: 207 PRLADRDASIDQIKKLYGLFRETDCTLLEINPIAETVDGQLVAADAKMNFDDNAAYRQKD 266

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I   RD S+ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 267 IFSFRDKSQEDPREVSAAEADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLD 326

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V++ +P+V+R
Sbjct: 327 VGGNASEGQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVVVR 386

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NVD+G  ++ ESGL +ITA +LDD
Sbjct: 387 LEGTNVDLGKSILKESGLALITAENLDD 414


>gi|319795823|ref|YP_004157463.1| succinyL-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
 gi|315598286|gb|ADU39352.1| succinyl-CoA synthetase, beta subunit [Variovorax paradoxus EPS]
          Length = 390

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 189/384 (49%), Positives = 263/384 (68%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LRKY V   +G   +S   A  A   L G  +VVK+QIHA         
Sbjct: 1   MNIHEYQGKDVLRKYGVTTPRGFACASADEAADAATRLGGRAWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V     ++LG TL T QTGP G  V  + VE+G +I +E+YL
Sbjct: 52  -GGRGKGGGVKLAWSVDEVRRHASQMLGMTLKTHQTGPEGRVVKRLLVEEGIEIDKEMYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR SG VA +AS++GGMDIEEVA   P KI K+LIDP  G+   +   +   + L 
Sbjct: 111 ALVVDRESGRVALMASSEGGMDIEEVAARTPGKIHKVLIDPATGLKGSEADIVARSIGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G++ +    L  NLY+AF   D SL EINPL++ ++GR+  LD+K +FD NAL+R  +I 
Sbjct: 171 GKSVMQARTLMQNLYQAFDASDASLAEINPLVVTRDGRVIALDAKFNFDSNALFRQPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E+EA + +LSYIALDG+IGC+VNGAGLAMATMD+IKLYGG+PANFLDVG
Sbjct: 231 AMRDFDEEDPAELEASRFDLSYIALDGDIGCLVNGAGLAMATMDVIKLYGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV  AFK++  + +++ IL+NIFGGIM+CDV+ +G+++A +EV++++PLV+R++
Sbjct: 291 GGATAEKVTQAFKLMLRNPNLRAILVNIFGGIMKCDVIARGVIAAAREVELSVPLVVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N  +G  ++A+SGL +ITA D+
Sbjct: 351 GTNESLGRTILAQSGLPIITADDM 374


>gi|188990492|ref|YP_001902502.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           campestris str. B100]
 gi|226734998|sp|B0RPQ9|SUCC_XANCB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167732252|emb|CAP50444.1| succinate-CoA ligase (ADP-forming) beta subunit [Xanthomonas
           campestris pv. campestris]
          Length = 389

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 181/396 (45%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V S+   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  V +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTVTYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F DKD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|156050539|ref|XP_001591231.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154692257|gb|EDN91995.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 463

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 245/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLRKY++ V  G V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 53  LSIHEYLSADLLRKYDIGVPNGAVAKSAAEAEAIAKKIGGDDMVIKAQVLAGGRGKGTFD 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 113 N---GLKGGVRVIYSPTEAKMFAEQMIGHKLVTKQTGAQGRICNSVYICERKFARREFYL 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT +    +   +   
Sbjct: 170 AILMDRASQGPVIVSSSQGGMDIETVAKESPNAITTTYIDIHKGVTDDIARKIVTDIGFS 229

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  D+ 
Sbjct: 230 EQCIEDAKDTVQKLYKIFMEKDATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKDVF 289

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I L G+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 290 EWRDTTQEDAEEVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVG 349

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF +ITSD  V  I +NIFGGI+RCD + +G++S V+ + + IP++ RL+
Sbjct: 350 GGATPQAIREAFTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISTVESMNLRIPIIARLQ 409

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL  AA+K V   K V
Sbjct: 410 GTNMEAAHQLINDSGLKIFSIDDLQSAAEKAVQFSKVV 447


>gi|327399556|ref|YP_004340425.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Hippea maritima DSM
           10411]
 gi|327182185|gb|AEA34366.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Hippea maritima DSM
           10411]
          Length = 402

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 181/395 (45%), Positives = 250/395 (63%), Gaps = 12/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +L  Y VPV +G V      A      L  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKEVLAGYGVPVPEGRVTYFPDDAWMVSMELGLPV-VLKAQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    +E+ G  L+TKQTGP G ++  + VE  ADI RELY 
Sbjct: 57  -------GGVKIARTSDEVRQIAQELFGKKLVTKQTGPEGVKIRKLLVEKAADIERELYF 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DRT+     IAS +GGM IEEVA+ YP+ I K+ IDP +G     +  L   L+L 
Sbjct: 110 SIVIDRTTSRPTVIASKRGGMSIEEVAEKYPEDIIKIPIDPAVGFLPYQIRRLKYDLDLM 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +F  LYK F +KD SLLE+NPL+++K+G +  +D+K+  DDNALYR  +I 
Sbjct: 170 A-QEKEAAKIFSALYKVFVEKDCSLLELNPLVVLKSGHMLAVDAKMDIDDNALYRRKEIS 228

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++RD++E D  E+EA+   L++I L GNIGCMVNGAGLAM TMD+IKL GG PANFLDVG
Sbjct: 229 KMRDLTEVDPDELEARFSGLNFIKLTGNIGCMVNGAGLAMTTMDVIKLAGGDPANFLDVG 288

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +A  F+IIT + SVK I INIFGGI+RCD +  GI+ A+K+V++ IP+V+RL 
Sbjct: 289 GEATPETIAKGFEIITRNPSVKAIFINIFGGIVRCDKVANGIIQALKKVEVKIPVVIRLT 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G  ++ +S L    A DL +AA+ +    
Sbjct: 349 GMNKEEGMEILKKSPLKFYIANDLREAAKMVSELA 383


>gi|148652081|ref|YP_001279174.1| succinyl-CoA synthetase subunit beta [Psychrobacter sp. PRwf-1]
 gi|189081775|sp|A5WC33|SUCC_PSYWF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148571165|gb|ABQ93224.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychrobacter
           sp. PRwf-1]
          Length = 389

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 194/397 (48%), Positives = 267/397 (67%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +P+ KG++  +   A  A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKLLLESYGLPIQKGIIAYNGEEAAEAFDKTPTDVAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLVKTREEAKEVAESLIGTNLVTYQTDAEGQPVNFVLVAEDMYPVKTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+KIF + +DPL+G+       +   L L
Sbjct: 111 LGAVVDRATRRVTFMASTEGGVEIEKVAEETPEKIFSITVDPLVGLLPFQAREVGFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    YKAF + D  ++EINPL + +NG L  +D KI  D NAL+R   I
Sbjct: 171 EGKQINQFVKLMTGAYKAFVENDFDMIEINPLAVRENGELACVDGKIGVDSNALFRQPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALHDPSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII  DSSV+G+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKDRVVEAFKIILEDSSVQGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +L+ ES + +I+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAKLLDESDVEIISAQGLSDAAQKIVDAVK 387


>gi|254468094|ref|ZP_05081500.1| succinyl-CoA synthetase (beta subunit) [beta proteobacterium KB13]
 gi|207086904|gb|EDZ64187.1| succinyl-CoA synthetase (beta subunit) [beta proteobacterium KB13]
          Length = 388

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/396 (45%), Positives = 255/396 (64%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LLRKY +    G V  +++   +  K +  P+ V+K+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKELLRKYEIQTPYGQVAETLNEVNALAKDIKNPV-VLKAQIHAGGRGKS--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +  +    ++LG  L+T Q  P+G  V+ +  E+  +I+ ELY 
Sbjct: 57  -------GGVKVVKSKEEALEFSSKLLGKNLVTYQNQPSGQPVHKILFEETENIINELYF 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR    V  + S+ GGM+IEE++K  P  I K   +P+ G+       L + L+  
Sbjct: 110 SILIDREEEKVCLVVSSAGGMEIEEISKKSPDLILKEFCNPITGLMDYQTRELANSLKFS 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       + YK F + ++SLLEINPL+I        LD KIS DDNALY+   + 
Sbjct: 170 ADLAGKFNKFAKSAYKLFTENNLSLLEINPLVINDANDFVALDCKISIDDNALYKQKKLS 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD S++DS+E EA    L+YIAL+G+IGCMVNGAGLAMATMD+I+  GG+PANFLDVG
Sbjct: 230 ELRDWSQDDSKEAEAHHAGLNYIALNGDIGCMVNGAGLAMATMDLIQHSGGSPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V+ AF+I+ SD +VK +L+NIFGGIMRCDV+ +GI+++ K+V ++IP+V+RLE
Sbjct: 290 GGASAETVSKAFRILLSDKNVKVVLVNIFGGIMRCDVIAEGIINSAKDVGVSIPIVVRLE 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G +L+ ES LN+ +A +L DAA+  V   K
Sbjct: 350 GTNVDDGKKLLKESYLNIHSADNLTDAAKIAVTYAK 385


>gi|195389212|ref|XP_002053271.1| GJ23792 [Drosophila virilis]
 gi|194151357|gb|EDW66791.1| GJ23792 [Drosophila virilis]
          Length = 451

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 181/398 (45%), Positives = 245/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + ++P  +  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESSIPTPRFAVAKNGKEAHDIAQKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +S      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVFSPESAEEYATKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++++R       IAS +GG+DIEEVAK+ P+ I    ID   G+T E    + D + L 
Sbjct: 155 SVMMERAFNGPVLIASKEGGVDIEEVAKENPEAIIYEPIDIGKGLTKEQACKIVDKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +  +   +  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GSSADEHIQMLLNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVMCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRSSGLKILARDDLDKAADLAVHLAQIV 432


>gi|198282727|ref|YP_002219048.1| succinyl-CoA synthetase subunit beta [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665538|ref|YP_002424921.1| succinyl-CoA synthase, beta subunit [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|226733921|sp|B7J4G8|SUCC_ACIF2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226733922|sp|B5EMG2|SUCC_ACIF5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|198247248|gb|ACH82841.1| succinyl-CoA synthetase, beta subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517751|gb|ACK78337.1| succinyl-CoA synthase, beta subunit [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 387

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 186/386 (48%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +  VPV + +   SV  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKRLLAEEGVPVPRAIPAFSVREAVNQARELGGPAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S+  V    +E+LG  L+T QTGP G  V  + +E+ + I RELYL
Sbjct: 58  -------GGVRMVDSIAQVEKAAQELLGKPLVTAQTGPQGQHVAALLIEEPSRIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR    + F+A+ +GG+DIEE+A   P+ + +++++P  G        L     L 
Sbjct: 111 ALMVDRGQARITFLATREGGVDIEELAASRPEALHRVVVEPSTGFLPFQARQLGFQFGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +Y+     D  ++EINPL I   GRL  LD+K+  DDNALYRH +  
Sbjct: 171 AGQVQQLTRIMQGMYRLAQRLDALMVEINPLAITAEGRLLALDAKVVMDDNALYRHPESD 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D +++D REI A+Q  L+YI+L+GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 ELFDSTQQDGREITARQFGLNYISLEGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  DKV  AFK+I SD+ VK IL+NIFGGI RCD+L +GI+ A  EV +++P+V+RLE
Sbjct: 291 GGAAADKVNQAFKLILSDTRVKAILVNIFGGITRCDLLAEGIIQAAAEVGLHLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G   + G  L+ ESGL++ITA  L D
Sbjct: 351 GTRKEEGMALLRESGLSLITADGLTD 376


>gi|116622480|ref|YP_824636.1| succinyl-CoA synthetase subunit beta [Candidatus Solibacter
           usitatus Ellin6076]
 gi|122254101|sp|Q021N6|SUCC_SOLUE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116225642|gb|ABJ84351.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 384

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 189/395 (47%), Positives = 256/395 (64%), Gaps = 12/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAKA+L +Y VPV +G V  +   AE+A KTL G + VVK+QIHA         
Sbjct: 1   MKIHEYQAKAILAQYKVPVPRGHVAYTEADAETAAKTLGGSV-VVKAQIHA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V       +   ++ILG TL+T QTGP G  V  + +E+   I RELYL
Sbjct: 51  -GGRGKGGGVKVAKDAAEALELAKKILGMTLVTHQTGPEGRLVQRLLIEETLPIERELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR  G   F+AS+ GGMDIEEVA   P+ I K  ++   G++      L   + + 
Sbjct: 110 GIVLDRVQGKPVFMASSAGGMDIEEVAAKTPELILKETLE-YPGLSPYQARKLAFGIGIP 168

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +          L KA+   D SL EINP I+  +G++  LD+KI+FDDNALYRH ++ 
Sbjct: 169 AASVNAAAAAMTALSKAYWAMDASLAEINPFILTTDGKVYALDAKITFDDNALYRHKELV 228

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EED  E+EA +H L+YI LDG +GCMVNGAGLAMATMDIIK  GG+PANFLDVG
Sbjct: 229 ELRDLNEEDPLEVEASKHGLNYIKLDGTVGCMVNGAGLAMATMDIIKFAGGSPANFLDVG 288

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ ++V  AF+I+ SD SVK +LINIFGGI+RCD L  G+++A +++ I +P+V+R+E
Sbjct: 289 GGANAEQVKNAFRILLSDHSVKAVLINIFGGILRCDTLATGVVAAARDLNIQVPIVVRME 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G +++ ESG N     D+ DAAQK+V   
Sbjct: 349 GTNVEAGRQILLESGFNFTVGADMWDAAQKVVKLA 383


>gi|331000520|ref|ZP_08324192.1| succinate-CoA ligase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329571484|gb|EGG53169.1| succinate-CoA ligase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 388

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 177/395 (44%), Positives = 254/395 (64%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ +L+ ++VPV    V SS   A    + + G ++ VKSQIHA         
Sbjct: 1   MKIHEYQARQILKNFDVPVPVAEVASSPEEARKIAEEIGGKIWAVKSQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+ V +  R ++GS L+TKQTGP G+ V+ V V+ G DI++E Y+
Sbjct: 52  -GGRGKGGGVKLARSLEDVSNLSRLMIGSRLVTKQTGPAGAPVSKVLVQRGLDIVQEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR       IAS +GGM+IE+VA  +P+KI K +IDP+ G++  +   +   L++ 
Sbjct: 111 GFLIDRKLQRPVLIASAEGGMEIEKVAAQFPEKIIKTVIDPVAGLSVPEALEVATRLDVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D  ++   L+  F   D SLLEINPLI+  + ++  LD K++FDDNAL RH +++
Sbjct: 171 ADIAGDCAEVLRKLWNTFVSMDCSLLEINPLIVTSDKKVYPLDVKMTFDDNALLRHPELE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D  +ED  E+ A +  L YI L+GNI C+VNGAGLAMATMD IKL+GG P NFLD+G
Sbjct: 231 ELHDPEQEDPTELRAHKAGLQYIQLNGNIACLVNGAGLAMATMDTIKLFGGEPDNFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAF+I+ +   VK IL+NIFGGIM+CDV+ +GI+ A + VK+++PL++R++
Sbjct: 291 GGASPEKVTAAFEIMLAQPEVKVILVNIFGGIMKCDVIAEGIVEACRHVKLSVPLIVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G +   G  ++  SGL +I+A  L DAAQK V   
Sbjct: 351 GTHEKEGKEILKNSGLPIISADSLGDAAQKAVEMA 385


>gi|303256571|ref|ZP_07342585.1| succinyl-CoA synthase, beta subunit [Burkholderiales bacterium
           1_1_47]
 gi|302860062|gb|EFL83139.1| succinyl-CoA synthase, beta subunit [Burkholderiales bacterium
           1_1_47]
          Length = 388

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/395 (44%), Positives = 253/395 (64%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ +L+ ++VPV    V SS   A    + + G ++ VKSQIHA         
Sbjct: 1   MKIHEYQARQILKNFDVPVPVAEVASSPEEARKIAEEIGGKIWAVKSQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  + ++GS L+TKQTGP G+ V+ V V+ G DI++E Y+
Sbjct: 52  -GGRGKGGGVKLARSLDDVSNLSKLMIGSRLVTKQTGPAGAPVSKVLVQQGLDIVQEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR       IAS +GGM+IE+VA  +P+KI K +IDP+ G++  +   +   L++ 
Sbjct: 111 GFLIDRKLQKPVLIASAEGGMEIEKVAAQFPEKIIKTVIDPVAGLSVPEALEVATRLDVP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D  ++   L+  F   D SLLEINPLI+  + ++  LD K++FDDNAL RH +++
Sbjct: 171 ADIAGDCAEVLRKLWNTFVSMDCSLLEINPLIVTSDKKVYPLDVKMTFDDNALLRHPELE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D  +ED  E+ A +  L YI L+GNI C+VNGAGLAMATMD IKL+GG P NFLD+G
Sbjct: 231 ELHDPEQEDPTELRAHKAGLQYIQLNGNIACLVNGAGLAMATMDTIKLFGGEPDNFLDIG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KV AAF+I+ +   VK IL+NIFGGIM+CDV+ +GI+ A + VK+++PL++R++
Sbjct: 291 GGASPEKVTAAFEIMLAQPEVKVILVNIFGGIMKCDVIAEGIVEACRHVKLSVPLIVRMK 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G +   G  ++  SGL +I+A  L DAAQK V   
Sbjct: 351 GTHEKEGKEILKNSGLPIISADSLGDAAQKAVEMA 385


>gi|291288247|ref|YP_003505063.1| succinyl-CoA synthetase, beta subunit [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885407|gb|ADD69107.1| succinyl-CoA synthetase, beta subunit [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 404

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 181/400 (45%), Positives = 254/400 (63%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK LLR Y VPV  G V S+   A    K L    +V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKGLLRTYGVPVPDGGVASTASDALRVAKELHSDRWVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V      +      +LG  ++TKQTG  G  V  + VE   DI +E+Y+
Sbjct: 58  -------GGVKVVDVFSDLYDLSANMLGMKIVTKQTGDEGKIVRRILVEKATDIKQEIYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR S     IAS++GG++IE+VA   P+K+ K  I+P+ G+       +   + L 
Sbjct: 111 SFLVDRDSEQHMIIASSEGGVEIEQVAAKTPEKVIKERINPVTGMGQFLGRKIAKKMGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LY+ F D D  +LEINPL++  +G +  LD+K+S D+NAL+RH  I+
Sbjct: 171 SSLLNKFADVTNKLYQCFIDHDGMMLEINPLVVTGSGDIVCLDAKMSVDENALFRHRAIE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E++D  E + +E+ A   +LSY++++GNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 EMKDYGELEPQEVRASIFDLSYVSMEGNIGCMVNGAGLAMATMDIIKSYGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +KV  AFKII +D  VK I +NIFGGI+RCD++ +G+L A +EV  +  +V+RL+
Sbjct: 291 GGADVNKVREAFKIILTDPKVKVIFVNIFGGIVRCDLIAQGVLKASEEVPGDRYIVVRLD 350

Query: 361 GANVDIGNRLIAE----SGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +++ +    SGLN++T   + DAA+K V   +
Sbjct: 351 GTNVEEGKKILEDGASKSGLNIVTGDTMADAAEKAVKLAE 390


>gi|301107704|ref|XP_002902934.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Phytophthora infestans T30-4]
 gi|262098052|gb|EEY56104.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Phytophthora infestans T30-4]
          Length = 507

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 176/399 (44%), Positives = 254/399 (63%), Gaps = 7/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           +N+HE+Q+  +++ + V   +G+   +   A++A   + G       V+K+Q   GGRG 
Sbjct: 95  LNLHEFQSLEIMKGFGVATPQGIPADTPAEAKAAFSKIRGDREGVDVVIKAQALTGGRGL 154

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FK      KGGV + +  +      +++LG TL+TKQTG  G  V  V++ +   + R
Sbjct: 155 GTFKN---GFKGGVHMCTKPEQAEDFAKKMLGETLVTKQTGAKGIEVAKVFLMERVWMRR 211

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y S+L+DR S     +AS  GG  IE+VA+  P+ IFK  +D   G T E VA L   
Sbjct: 212 EMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKENVDISTGPTDEQVARLAKA 271

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L  +G+          NLY  F   D +L+EINPL   + G +   D+K+++DDNA +RH
Sbjct: 272 LGGEGEVLKKLETQIKNLYDMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRH 331

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD ++ED RE+EA  ++L+YI LDGNIGC+VNGAGLAMATMDII LYGG+PANF
Sbjct: 332 KEIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANF 391

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +++V  AF+I+  D  VK IL+NIFGGIMRCDV+  GI++A K++ +  P++
Sbjct: 392 LDVGGGATEEQVKKAFEILDGDDQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPVI 451

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G NV+   ++IAESG+ +I A DL+DAA+K V   
Sbjct: 452 IRLQGTNVEPARKIIAESGIKMIVADDLEDAAEKAVKIA 490


>gi|240123378|ref|ZP_04736334.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268682003|ref|ZP_06148865.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268622287|gb|EEZ54687.1| succinyl-CoA synthetase subunit beta [Neisseria gonorrhoeae PID332]
          Length = 388

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 191/396 (48%), Positives = 264/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++  +   A +A   L G   VVK+Q+HA         
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V +S +        ++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 52  -GGRGKVGGVKVVNSREKAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IE+VA + P+KIFK+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    YKAF + D +L E+NPL + +NG L  +D KI  D NALYR   I
Sbjct: 171 KDKQINEFAKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A + +L+Y+AL+G IGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFDLNYVALEGKIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKE+ +N+P+V+RL
Sbjct: 291 GGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|330839371|ref|YP_004413951.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Selenomonas
           sputigena ATCC 35185]
 gi|329747135|gb|AEC00492.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Selenomonas
           sputigena ATCC 35185]
          Length = 396

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 176/401 (43%), Positives = 250/401 (62%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   SV  A    K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQVLREFGVNVPNGLPAFSVEEAVENAKKLGAAVTVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V    +E+LG  L+T QTGP G +V  + +E+G++I +E YL
Sbjct: 58  -------GGVKIAKSVEEVEGYAKELLGKVLVTHQTGPEGKKVGRLLIEEGSNIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR +  +  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 111 SFVVDRATARIVMMGSEEGGVEIEKVAAETPEKIIKEYIDPVIGLAPFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   LY AF  KD S +EINPL++     +  LD+K++FDD+AL+RH DI 
Sbjct: 171 APAIRKAAALMEKLYNAFIGKDCSQVEINPLVVTAEDDVICLDAKLNFDDSALFRHPDIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E EA    L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 231 ELRDETEEDPKEREAAAAGLNYVNLGGDVACMVNGAGLAMATVDIIKHYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G ++ +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 291 GDSEPEKIAKAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKIISKDGKSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 351 VVRLEGTKVEEGREILKNTPISNVFPAPTMEGGAEQIVKLV 391


>gi|323143443|ref|ZP_08078126.1| succinate-CoA ligase, beta subunit [Succinatimonas hippei YIT
           12066]
 gi|322416728|gb|EFY07379.1| succinate-CoA ligase, beta subunit [Succinatimonas hippei YIT
           12066]
          Length = 392

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/395 (44%), Positives = 245/395 (62%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LLR Y +PV +  V S       A   L    +V K Q+H+G RGK    
Sbjct: 1   MNLHEYQSKELLRSYGLPVPEFKVSSKTTGIGKAAYELSPGPFVCKCQVHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V ++     +   + LG+ L+T+Q+GP G  V+ + +E   + +RELY+
Sbjct: 58  -------GGVVVVNTPAEAEAFAAKWLGNRLVTRQSGPHGKPVSKILIERATEAVRELYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
              +DRT+  +  +AS  GGM +EE+A  +P++I K+ ID L G       +L   L L+
Sbjct: 111 GATIDRTNAHLTIMASESGGMSVEEIAATHPERILKVPIDELTGPLPYQGRALAYKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +   +F  + K F DKD+SL+E+NPL + K G L  LD+KI+ D  ALYRH +  
Sbjct: 171 GKQVNEFTKIFVGIAKLFIDKDLSLVEVNPLAVTKEGSLLCLDAKINVDSYALYRHPEFL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED R  +A     SY+ L+GNIGC+VNGAGLAM TMDIIK  GG+PANFLDVG
Sbjct: 231 EMDDPSQEDPRIAKAVASGFSYVPLEGNIGCLVNGAGLAMGTMDIIKSSGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +D+V  AFKII  D +VK IL+NIFGGI+RCD++ +GI  A+ EV  ++P+V+RLE
Sbjct: 291 GTATRDRVMEAFKIILEDPAVKCILVNIFGGIVRCDLIAEGIRGAITEVGTDVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G +   G +++ ESGLN+  A DL  AA+  V   
Sbjct: 351 GNHAQDGAKILKESGLNIHPAYDLRQAAELAVECA 385


>gi|190575606|ref|YP_001973451.1| succinyl-CoA synthetase subunit beta [Stenotrophomonas maltophilia
           K279a]
 gi|194366936|ref|YP_002029546.1| succinyl-CoA synthetase subunit beta [Stenotrophomonas maltophilia
           R551-3]
 gi|254524453|ref|ZP_05136508.1| succinyl-CoA synthetase beta subunit [Stenotrophomonas sp. SKA14]
 gi|226734993|sp|B4ST72|SUCC_STRM5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734994|sp|B2FRS3|SUCC_STRMK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|190013528|emb|CAQ47163.1| succinyl-CoA synthetase beta chain [Stenotrophomonas maltophilia
           K279a]
 gi|194349740|gb|ACF52863.1| succinyl-CoA synthetase, beta subunit [Stenotrophomonas maltophilia
           R551-3]
 gi|219722044|gb|EED40569.1| succinyl-CoA synthetase beta subunit [Stenotrophomonas sp. SKA14]
          Length = 389

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 180/396 (45%), Positives = 261/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A +A  +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVAAANSLGQGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMATYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKALV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDPTEVIASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+KIV AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKIVEAVK 386


>gi|260886822|ref|ZP_05898085.1| succinyl-CoA ligase [ADP-forming] subunit beta [Selenomonas
           sputigena ATCC 35185]
 gi|260863421|gb|EEX77921.1| succinyl-CoA ligase [ADP-forming] subunit beta [Selenomonas
           sputigena ATCC 35185]
          Length = 398

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 176/401 (43%), Positives = 250/401 (62%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   SV  A    K L   + VVK+QIHAGGRGK    
Sbjct: 3   MNIHEYQSKQVLREFGVNVPNGLPAFSVEEAVENAKKLGAAVTVVKAQIHAGGRGKA--- 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++ V    +E+LG  L+T QTGP G +V  + +E+G++I +E YL
Sbjct: 60  -------GGVKIAKSVEEVEGYAKELLGKVLVTHQTGPEGKKVGRLLIEEGSNIKKEYYL 112

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR +  +  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 113 SFVVDRATARIVMMGSEEGGVEIEKVAAETPEKIIKEYIDPVIGLAPFQATRMAYAINIP 172

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   LY AF  KD S +EINPL++     +  LD+K++FDD+AL+RH DI 
Sbjct: 173 APAIRKAAALMEKLYNAFIGKDCSQVEINPLVVTAEDDVICLDAKLNFDDSALFRHPDIV 232

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EED +E EA    L+Y+ L G++ CMVNGAGLAMAT+DIIK YGG PANFLDVG
Sbjct: 233 ELRDETEEDPKEREAAAAGLNYVNLGGDVACMVNGAGLAMATVDIIKHYGGEPANFLDVG 292

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----KINIPL 355
           G ++ +K+A AF I+      KGI +NIFGGI RCD +  GI+ A K +      + +P+
Sbjct: 293 GDSEPEKIAKAFNIMLEGGQAKGIFVNIFGGINRCDNIANGIIEAAKIISKDGKSLPVPV 352

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG  V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 353 VVRLEGTKVEEGREILKNTPISNVFPAPTMEGGAEQIVKLV 393


>gi|68171549|ref|ZP_00544927.1| Succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658279|ref|YP_507766.1| succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Arkansas]
 gi|123492843|sp|Q2GFL7|SUCC_EHRCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|67999033|gb|EAM85706.1| Succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599736|gb|ABD45205.1| succinyl-CoA synthetase, beta subunit [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 387

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 207/396 (52%), Positives = 265/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L K+ V V KGVV+ S+   + A+  L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKHILSKFGVNVPKGVVVHSLGEVDGALSQLNSKVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +L    + I+ +LGSTLIT QT   G +V  VY+E+G +I +E Y+
Sbjct: 58  -------GGVVVSRTLDETKTSIKNMLGSTLITHQTSKDGQKVRKVYLEEGCNIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +V+R  G V+ I ST+GG+DIEEVA   P+K+    I+P+ G       +LC    L 
Sbjct: 111 SAIVNRKQGQVSIIFSTEGGVDIEEVAATSPEKVIVCNINPVFGFQGFHGRNLCFDSNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +YKA    D + +EINPL+   +G    LD+KI+FDDNALYRH DIQ
Sbjct: 171 LDQTRKISDIAGKIYKAVLSTDANQIEINPLVETSSGEFIALDAKINFDDNALYRHPDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEIKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q  V  AFKII +D  V GIL+NIFGGIMRCD++  GI++A++E+ IN+PLV+RL 
Sbjct: 291 GGASQKTVTEAFKIILADDKVNGILVNIFGGIMRCDIIANGIIAAIQEIGINVPLVVRLS 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +L+ +S LN+ITA DL +AA  IV+ V+
Sbjct: 351 GTNFELGKKLLDDSNLNIITANDLSEAAYNIVNIVR 386


>gi|50427905|ref|XP_462565.1| DEHA2G23584p [Debaryomyces hansenii CBS767]
 gi|49658235|emb|CAG91076.1| DEHA2G23584p [Debaryomyces hansenii]
          Length = 414

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 167/395 (42%), Positives = 239/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE+++ ALL+ Y V V  G   ++   A    K L     VVK+Q   GGRGKG F 
Sbjct: 20  LSLHEFRSAALLKTYGVGVPDGSAATTPEKAYEVAKALGTNDLVVKAQALTGGRGKGHFD 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++ SS +       ++LG  LITKQTG  G  V  VY+ +  D   E YL
Sbjct: 80  N---GFQGGVKLISSPEEAKELAEKMLGHKLITKQTGEAGKEVTAVYIVERRDARTEAYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR++     +AS+QGGMDIE VA   P  I    +    GV+ +    +  +L   
Sbjct: 137 AILMDRSTQTPLIVASSQGGMDIEGVAAKDPDAIKSFPVPLEEGVSDKLAIDIASVLGYT 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A  +      NLYK F ++D + +EINPL    + ++  +D+K++FDDNA +R  ++ 
Sbjct: 197 QEAIPEAAKTVQNLYKVFMERDCTQVEINPLSETPDHKVLAMDAKLNFDDNAAFRQKEVF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED  E+ A ++ L++I LDGNI  +VNGAGLAMATMDIIKLYGGAPANFLD G
Sbjct: 257 SWRDPSQEDPEEVTAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGAPANFLDCG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + +  AF++I SD  V GI +NIFGGI+RCD + +G+++A K   ++IP+V+RL+
Sbjct: 317 GTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVVRLQ 376

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N+     LI  SGL +    DLD AA+KIV   
Sbjct: 377 GTNMAKAKELIENSGLKLYAFEDLDPAAEKIVALA 411


>gi|227538435|ref|ZP_03968484.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241717|gb|EEI91732.1| succinate--CoA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 397

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 181/407 (44%), Positives = 250/407 (61%), Gaps = 20/407 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V  +   A  A K +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKQILKSFGVTVQEGIVADTPEQAVEAAKKMKEDYNSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  +L  V     +I+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKQRATDIIGMQLVTPQTGPEGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ASETKEFYMSVLLDRATGRNIVMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLSGSAHKEMVKFVAALYKAYDATDSSMFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RDV+EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDYAAMRDVTEEDPTEVEAGESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 EPANFLDVGGTANAETVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +   +KG
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLKVYSAILLKEAADLVTKVLKG 397


>gi|326435318|gb|EGD80888.1| succinyl-CoA ligase subunit beta [Salpingoeca sp. ATCC 50818]
          Length = 455

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 173/399 (43%), Positives = 253/399 (63%), Gaps = 4/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHE  ++ L++ Y + VA+G    S   A +A K++     V+K+Q+ AGGRGKG F 
Sbjct: 30  LNIHEADSQELMKSYGLNVARGAKAKSPEEAVTAAKSMSTSKVVLKAQVLAGGRGKGVFD 89

Query: 61  ELPADSKGGVRVESSLK-SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  GGV V  + +  V     +++G  LITKQTG  G   N + V +  ++ +E Y
Sbjct: 90  N---GFSGGVHVLDNDESKVREIASQMIGHNLITKQTGKEGRPCNMIQVVEAVNVQKEFY 146

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +     I S+QGGMDIE VA + P  I KL ID   G++ E   +    + +
Sbjct: 147 LALLLDRAAMGPVMIGSSQGGMDIEAVAAENPDAIVKLPIDIDGGLSMEAATNFARQMGI 206

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    D    LY+ F ++D SL+EINP   +    +  LD+K++FDDNA +R   +
Sbjct: 207 PDSCVDSAADQMVKLYQLFLERDCSLVEINPFAQVGPSEVMCLDAKLNFDDNAEFRQSGV 266

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E RD ++E+  ++EA + +L+YI LDGNIGC+VNGAGLAMATMDII+L+GG+PANFLDV
Sbjct: 267 FEKRDTTQENKADVEAAKFDLNYIQLDGNIGCLVNGAGLAMATMDIIQLHGGSPANFLDV 326

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +V  AFK+IT D +V  IL+NIFGGIMRCDV+ +GI+ A  ++ +++P+++RL
Sbjct: 327 GGGATARQVTEAFKLITQDPNVSAILVNIFGGIMRCDVIAEGIIHAASDLDLSVPIIVRL 386

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +G N +    +IA SGL++I++ +LDDAA + V   K V
Sbjct: 387 QGTNREEAKEMIANSGLDIISSDELDDAAFRAVQLSKIV 425


>gi|221633777|ref|YP_002523003.1| succinyl-CoA synthetase subunit beta [Thermomicrobium roseum DSM
           5159]
 gi|221156306|gb|ACM05433.1| succinyl-CoA synthase, beta subunit [Thermomicrobium roseum DSM
           5159]
          Length = 390

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 166/397 (41%), Positives = 239/397 (60%), Gaps = 20/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQA  L  +Y +PV +G+V  +   A +A + L G + VVK+Q+HAGGRGK    
Sbjct: 13  MDLHEYQAAELFARYGIPVNRGIVARTPEEASAAAEQLGGRV-VVKAQVHAGGRGKA--- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+        +  R+ILG  +        G  V  V V       RE YL
Sbjct: 69  -------GGIRLADDPVQAEAVARQILGMEI-------RGRIVRKVLVAPAVAFEREYYL 114

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS+ GG+DIEEVA++ P  I +   DP +G        L   L ++
Sbjct: 115 GAVLDRDSRRIVVMASSAGGVDIEEVARERPTAIVREQADPFLGFLDFQARRLAFRLGIE 174

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LY+AF D D SL EINPL++ ++     LD+K+  DDN L+RH D+ 
Sbjct: 175 PDLVRGFATIARQLYRAFVDNDASLAEINPLVLTQDRSWLALDTKVVLDDNGLFRHPDLA 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EED  E EA+   +S++ L+G +GC+VNGAGL+MATMD IKLYGG PANFLD+G
Sbjct: 235 ELRDPEEEDPLEREARLAGISFVRLNGTVGCIVNGAGLSMATMDAIKLYGGEPANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   +VAAA +I+ +D +V+ IL+NIFGGI R DV+ +GIL A+++V++ +P+V+RL 
Sbjct: 295 GGASAQRVAAALRIVVADPNVRAILVNIFGGITRGDVVAQGILEALRQVEVRVPMVIRLV 354

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   + G RL+ E+G  V     +++AAQ+ V   +G
Sbjct: 355 GTRQEEGRRLLEEAGFTV--VDTMEEAAQRAVALAQG 389


>gi|254455654|ref|ZP_05069083.1| malate--CoA ligase subunit beta [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082656|gb|EDZ60082.1| malate--CoA ligase subunit beta [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 386

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 174/396 (43%), Positives = 262/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + V + +G ++ S   AE+  + + G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKEILSSFGVTIPRGGIVYSPETAENKAREIGGSKWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ V +S   V     ++LG  L+T QTGP G  VN +Y+E+ +DI +ELYL
Sbjct: 58  -------GGIIVCNSPLEVAQATDKLLGKKLVTNQTGPEGKIVNRIYIEEASDIEKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+ DR+S  +  +AST+GGM +EE+AK+ P+ I +  I+  +G+ +     L   L ++
Sbjct: 111 GLVFDRSSESIMVVASTEGGMSVEEIAKEKPETIIRSKIEVAVGIQNFQARELAFGLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +      KAF + D +++E+NPL+I K  ++  LD K+SFD+NA++R   + 
Sbjct: 171 PELIRRASETIIGCAKAFSELDATMVEVNPLVISKQKQILALDCKMSFDNNAMFRRDKVS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++ED +E+ A    L+Y++L+GNIG ++NGAGLAMA+MD+IKL GG PANFLDVG
Sbjct: 231 ELRDKTQEDEKEVFASDRGLNYVSLEGNIGNIINGAGLAMASMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +K+  AF++IT D  VK IL+NIF GI RCD + +GI+ A+++++I +PLV+RL 
Sbjct: 291 GGATPEKIVKAFRLITMDKKVKVILVNIFAGINRCDWVAEGIVQALEKIEIKVPLVIRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ GN+++ +S LN I A  L+DAA K V A+K
Sbjct: 351 GTNVEKGNKILQDSKLNYIEANTLEDAANKAVAALK 386


>gi|154289904|ref|XP_001545556.1| ATP-specific succinyl-CoA synthetase beta subunit [Botryotinia
           fuckeliana B05.10]
 gi|150848565|gb|EDN23758.1| ATP-specific succinyl-CoA synthetase beta subunit [Botryotinia
           fuckeliana B05.10]
          Length = 445

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 244/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLRKY + V  G V  +   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 35  LSIHEYLSADLLRKYGIGVPDGSVAKTAAEAEAIAKKIGGDDMVIKAQVLAGGRGKGTFD 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 95  N---GLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICNSVYICERKFARREFYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAK+ P  I    ID   GVT +    +   +   
Sbjct: 152 AILMDRASQGPVIVSSSQGGMDIETVAKESPNAITTTYIDIHKGVTDDIARKIVTDIGFS 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   +  D    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 212 EQCIEEAKDTVQKLYKIFMEKDATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKEVF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I L G+IGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 272 EWRDTTQEDAEEVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +  AF +ITSD  V  I +NIFGGI+RCD + +G++S V+ + + IP++ RL+
Sbjct: 332 GGATPQAIKEAFTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISTVESMNLRIPIIARLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  ++LI +SGL + +  DL  AA+K V   K V
Sbjct: 392 GTNMEAAHKLINDSGLKIFSIDDLQSAAEKAVQFSKVV 429


>gi|270007302|gb|EFA03750.1| hypothetical protein TcasGA2_TC013859 [Tribolium castaneum]
          Length = 444

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/395 (44%), Positives = 242/395 (61%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ +  LL+   + V K  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 35  LNVHEHISYTLLKDAGIQVPKFGVAKTKQEARKIAEDLKTKDIVLKAQVLAGGRGKGHFK 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S +       ++LG  L+TKQTG  G   N V V +     +E Y 
Sbjct: 95  N---GLKGGVRMVYSPEEAEDIAGQMLGQYLVTKQTGEKGRICNAVMVAERKFPRKEFYF 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA + P  I    ID + G++ E    +   + L 
Sbjct: 152 AIMMERAFGGPVIIASSQGGINIEEVAAENPAAILYEPIDIVKGLSKEQAQKVAVNVGL- 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +   GD+   +Y  FC KD  L+EINP           LD+K  FDDNA +R  D+ 
Sbjct: 211 GSQKEKTGDMLLKMYDLFCKKDALLIEINPYAEDAGETYFSLDAKFRFDDNAAFRQKDLF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+ A + +L+YIALDG+IGC+VNGAGLAMATMDII L+GG+PANFLDVG
Sbjct: 271 ALRDWTQEDEKEVAAAKFDLNYIALDGSIGCLVNGAGLAMATMDIISLHGGSPANFLDVG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P++ RL+
Sbjct: 331 GGATAQAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELNLKMPIICRLQ 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA SGL ++   +LD+AA+  V   
Sbjct: 391 GTNVDDAKVLIASSGLKILPVDNLDEAARLAVKLS 425


>gi|91082037|ref|XP_970725.1| PREDICTED: similar to AGAP004744-PA [Tribolium castaneum]
          Length = 447

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/395 (44%), Positives = 242/395 (61%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ +  LL+   + V K  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYTLLKDAGIQVPKFGVAKTKQEARKIAEDLKTKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  S +       ++LG  L+TKQTG  G   N V V +     +E Y 
Sbjct: 98  N---GLKGGVRMVYSPEEAEDIAGQMLGQYLVTKQTGEKGRICNAVMVAERKFPRKEFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA + P  I    ID + G++ E    +   + L 
Sbjct: 155 AIMMERAFGGPVIIASSQGGINIEEVAAENPAAILYEPIDIVKGLSKEQAQKVAVNVGL- 213

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +   GD+   +Y  FC KD  L+EINP           LD+K  FDDNA +R  D+ 
Sbjct: 214 GSQKEKTGDMLLKMYDLFCKKDALLIEINPYAEDAGETYFSLDAKFRFDDNAAFRQKDLF 273

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+ A + +L+YIALDG+IGC+VNGAGLAMATMDII L+GG+PANFLDVG
Sbjct: 274 ALRDWTQEDEKEVAAAKFDLNYIALDGSIGCLVNGAGLAMATMDIISLHGGSPANFLDVG 333

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIIT+D  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P++ RL+
Sbjct: 334 GGATAQAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELNLKMPIICRLQ 393

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA SGL ++   +LD+AA+  V   
Sbjct: 394 GTNVDDAKVLIASSGLKILPVDNLDEAARLAVKLS 428


>gi|225874174|ref|YP_002755633.1| succinyl-CoA synthase, beta subunit [Acidobacterium capsulatum ATCC
           51196]
 gi|254778423|sp|C1F2F2|SUCC_ACIC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|225792495|gb|ACO32585.1| succinyl-CoA synthase, beta subunit [Acidobacterium capsulatum ATCC
           51196]
          Length = 391

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 183/389 (47%), Positives = 248/389 (63%), Gaps = 13/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +L KY V V +G V +++  A    K L        VVK+QIHA      
Sbjct: 1   MKIHEYQAKDILAKYGVAVPRGEVANTLEEAMDVAKRLFAEGAKGVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  +L+      ++ILG  L+T QTGP G +V  + +E+ A I RE
Sbjct: 55  ----GGRGKGGGVKVAKTLEEAEQYAKQILGMQLVTHQTGPQGQKVQRLLIEETAAIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL +++DR +  + F+AS  GGM+IEEVA   P  IFK  IDP +G  +     L   L
Sbjct: 111 LYLGIVLDRAAAKLVFMASQAGGMEIEEVAAKDPSAIFKAYIDPAVGFQAYQARQLAFAL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+     D       LYKA+ D D SLLEINP I  K+ +L  LD KI+FDDNA++RH 
Sbjct: 171 GLKPTQINDAVKFMMGLYKAYMDTDASLLEINPFITTKDDKLFALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD++EED  E+EA ++ L+YI LDGNI CMVNGAGLAMATMDII+  GG PANFL
Sbjct: 231 DLKELRDIAEEDPLEVEASKYALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGMPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q ++  AF+I+ SD +V+ + INIFGGI+R D L  G++ A +++ + +P+V+
Sbjct: 291 DVGGGANQQQIEHAFEILLSDKNVQAVFINIFGGILRVDTLAHGVVGAAQKLNVKVPIVL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDD 386
           RLEG NV+ G +++ +SGLN I    + D
Sbjct: 351 RLEGTNVEEGRKILKDSGLNFIVGDTMQD 379


>gi|164608346|gb|ABY62724.1| mitochondrial succinyl-CoA synthetase beta subunit [Blastocystis
           sp. ATCC 50177]
 gi|164608348|gb|ABY62725.1| mitochondrial succinyl-CoA synthetase beta subunit [Blastocystis
           sp. ATCC 50177]
          Length = 416

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/404 (46%), Positives = 257/404 (63%), Gaps = 11/404 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           +NIHE+Q+K L++KY      G V  S   +    K L    PG  +VVK+Q+ AGGRGK
Sbjct: 15  LNIHEWQSKQLIQKYGGRAQSGEVAFSPERSRDIAKKLWNQFPGCKFVVKAQVLAGGRGK 74

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G ++      +GGV++  + + V     E++G  LITKQTG  G   N V V     IL+
Sbjct: 75  GHWEH---GMQGGVKLAKTPEEVYEIANEMIGHKLITKQTGAKGINCNKVMVCGAVKILK 131

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS+L+DR  G    IA++QGGM IEEVA+  P+ +FK+ I    G T+E +  L   
Sbjct: 132 EFYLSILLDRAMGCPVIIATSQGGMGIEEVAQKCPECLFKVPISVKNGPTNEQLVKLAKD 191

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII----MKNGRLRVLDSKISFDDNA 232
           L L+G    D  D    LY+ F   D +++EINPL +         +  LD+KI+FD +A
Sbjct: 192 LGLEGDLVQDCVDNVKALYQVFDKCDSTMVEINPLGVIETPTDEKVICCLDAKIAFDKDA 251

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R  +I  LRD S ED R++ A   +L+Y+ LDG+IGCMVNGAGLAMATMD I  +GG+
Sbjct: 252 AFRQKEIFALRDKSREDPRDVRASLADLNYVGLDGDIGCMVNGAGLAMATMDTINYFGGS 311

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLDVGG A ++++  A +I+ SD  VK ILINIFGGIMRCDV+ +GI+ AV+E+K++
Sbjct: 312 AANFLDVGGNAKKEQITEALRILNSDKHVKSILINIFGGIMRCDVVAQGIMDAVREMKLD 371

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +PLV+RLEG NV  G  ++  SGLN+I A DL DAA+K V ++K
Sbjct: 372 LPLVVRLEGTNVAKGKEILKSSGLNIIPANDLGDAAKKAVASLK 415


>gi|255070267|ref|XP_002507215.1| succinate-coa ligase [Micromonas sp. RCC299]
 gi|226522490|gb|ACO68473.1| succinate-coa ligase [Micromonas sp. RCC299]
          Length = 423

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 182/397 (45%), Positives = 253/397 (63%), Gaps = 7/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           +NIHEYQ   +L ++ V V  G+   +     +A + L       V+KSQI AGGRG G 
Sbjct: 31  LNIHEYQGAEILARHGVRVPLGIACQTADQVHAAAEKLRSDDGDVVLKSQILAGGRGLGH 90

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +  S K   +   ++LG  L+TKQTG  G  VN V V     ++ E+
Sbjct: 91  FKN---GLQGGVHIVPSGK-AQAVGEKMLGQLLVTKQTGAAGKPVNTVLVAQKMKLVNEM 146

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++L+DR S     IA ++GG  IE++A+ +P+KI ++ ID   G+T      +   L 
Sbjct: 147 YFAILLDRASAGPLVIACSEGGTSIEDLAETHPEKITRMKIDIRTGLTEAQARDIVAHLG 206

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           ++G +  D       LY  F   D ++LEINPL      +L   D+K++FDDNA YR   
Sbjct: 207 VKG-SVSDAVAQVKALYNVFISSDCTMLEINPLAETAEAKLIAADAKLNFDDNAEYRQKG 265

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  LRD S+ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMDII L+G APANFLD
Sbjct: 266 LFALRDHSQEDPREVTAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIISLHGAAPANFLD 325

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD+ V+ +L+NIFGGIM+CDV+  GI+SA K+V + +PLV+R
Sbjct: 326 VGGNASEQQVVEAFKILTSDTKVQALLVNIFGGIMKCDVIASGIVSAAKQVGLQVPLVVR 385

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+ G  ++ +SG+++I A DLDDAA+K V A+
Sbjct: 386 LEGTNVEAGKEILEKSGMDIIAANDLDDAAKKAVSAL 422


>gi|195111100|ref|XP_002000117.1| GI10056 [Drosophila mojavensis]
 gi|193916711|gb|EDW15578.1| GI10056 [Drosophila mojavensis]
          Length = 451

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 184/398 (46%), Positives = 244/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + N+P  +  V  +   A    K L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESNIPTPRFAVAKNGKEAHDIAKKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    KS      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVFDPKSAEEISSKMIDQLLVTKQTGEAGRLCKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA+D P  I    ID   G+T E    + D + L 
Sbjct: 155 AVMLERAFNGPVLIASKEGGVDIEEVARDSPDAIIYEPIDIGKGLTKEQACRVIDKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +  D+  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GENAQEHVDMLLNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SLRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVMCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRNSGLKILARDDLDKAADMAVHLAQIV 432


>gi|255719276|ref|XP_002555918.1| KLTH0H00880p [Lachancea thermotolerans]
 gi|238941884|emb|CAR30056.1| KLTH0H00880p [Lachancea thermotolerans]
          Length = 418

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 244/398 (61%), Gaps = 5/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y V    G        A    K L     VVK+Q   GGRGKG F 
Sbjct: 24  LSIHEYRSAELLRQYGVGTPAGEAAFEPQQAYDIAKKLGHDALVVKAQALTGGRGKGHFD 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K GV +  S +      +++L   LITKQ+G  G  V+ VYV +  +   E YL
Sbjct: 84  ---TGLKSGVHMIESAEQARDLAKQMLKHRLITKQSGAKGKPVSAVYVVERVNAKHEAYL 140

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR S     I S++GGM+IEEVA   P  I K  +    G+T+E    +   L   
Sbjct: 141 SILMDRQSKKAMIICSSEGGMNIEEVAAKNPDAIKKFTVTESEGLTAETAKQISKSLGFS 200

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSKISFDDNALYRHLD 238
            +A  D  D    LYK F +KD S +EINPL  ++  + ++  +D+K  FDDNA +R  +
Sbjct: 201 AEAEADAADAVTKLYKIFKEKDASQIEINPLSEVEGQDTKVMCMDAKFGFDDNASFRQEE 260

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +   RD+S+ED+ E+ AK+ +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFLD
Sbjct: 261 VYSWRDLSQEDADEVVAKKSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 320

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGGA  + +  AFK+I S+  V GI +NIFGGI+RCD + +G++SA K + +++P+V R
Sbjct: 321 CGGGATPETIETAFKLILSNEKVDGIFVNIFGGIVRCDFVAQGLVSATKNLAVSVPIVAR 380

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N++ G R+I ESGL + +  +LD AAQK+V   +
Sbjct: 381 LQGTNLEEGRRIIEESGLKIYSFDELDPAAQKVVELTR 418


>gi|313207057|ref|YP_004046234.1| succinyl-CoA synthetase, beta subunit [Riemerella anatipestifer DSM
           15868]
 gi|312446373|gb|ADQ82728.1| succinyl-CoA synthetase, beta subunit [Riemerella anatipestifer DSM
           15868]
 gi|315022549|gb|EFT35576.1| succinyl-CoA synthetase subunit beta [Riemerella anatipestifer
           RA-YM]
 gi|325335506|gb|ADZ11780.1| Succinyl-CoA synthetase, beta subunit [Riemerella anatipestifer
           RA-GD]
          Length = 396

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/405 (43%), Positives = 252/405 (62%), Gaps = 20/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ+K +L KY V V +G+V S+V  A+ A + L        +VVK+Q+HA     
Sbjct: 1   MNLHEYQSKEILAKYGVRVQRGIVASTVEEAKKAAEQLSAETGTKAWVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV+   +++ +  + R I+G  L+T QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKFSPNMEKLEENARNIIGMQLVTPQTSAEGKKVHSVLIAEDMYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L+DR  G    + ST+GGMDIE+VA++ P  I    +DP +G+      
Sbjct: 111 DSEPKEYYVSVLLDRAKGKNMIVYSTEGGMDIEQVAEETPHLIHNEEVDPALGLQPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G+A  D       LY A+   D SL EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLEGEAFKDFVKFITALYNAYVGIDASLFEINPVLKTSDNKIAAVDAKVTLDNN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+ ELRD  EED  E+EA +  L+++ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALFRHKDLAELRDKREEDPTEVEAGEAGLNFVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE-VK 350
            PANFLDVGG AD ++V  AF II  D +VK ILINIFGGI+RCD + +G++ A K   +
Sbjct: 291 NPANFLDVGGTADAERVEKAFGIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKSFGE 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           + +PL++RL+G N +   RLI ESGL V +AI L++AA K+   +
Sbjct: 351 LPVPLIVRLQGTNAEEAKRLIDESGLPVHSAITLEEAANKVKEVL 395


>gi|257453548|ref|ZP_05618838.1| succinyl-CoA synthetase beta chain [Enhydrobacter aerosaccus SK60]
 gi|257449006|gb|EEV23959.1| succinyl-CoA synthetase beta chain [Enhydrobacter aerosaccus SK60]
          Length = 391

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 191/398 (47%), Positives = 267/398 (67%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK LL+ Y +PV +G++  +   A +A   + G     VVK+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKELLKSYGLPVQEGIIAKNGDEAAAAFDKMAGNAGAVVVKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRE 117
                    GGV++  + +       E++G  L+T QT   G  VN V + ED   I  E
Sbjct: 60  ---------GGVKIAKTREEAKQIAEELIGKNLVTYQTDANGQPVNSVLIAEDMYPIATE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL  +VDR++  V F+AST+GG++IE+VA++ P+KI K+ +DPL+G+       +   L
Sbjct: 111 LYLGAVVDRSARRVVFMASTEGGVEIEKVAEETPEKILKVEVDPLVGLQPSQAREVAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+ +   +   L    YKAF + D +L EINPL + K+G L  +D+KI  D NALYR  
Sbjct: 171 GLKDKQINEFAKLMTGAYKAFTENDFALFEINPLAVRKSGELACVDAKIGIDSNALYRLP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            + E RD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFL
Sbjct: 231 KVAEQRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA +++V  AFK+I  D SV+G+LINIFGGI+RCD++ + I+ AVKEV + +P+V+
Sbjct: 291 DVGGGATKERVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG N + G +++ +SGL +I A  L +A QKIV AV
Sbjct: 351 RLEGNNAEKGAQILRDSGLKLIPAEGLSEAGQKIVDAV 388


>gi|320161460|ref|YP_004174684.1| succinyl-CoA synthetase beta chain [Anaerolinea thermophila UNI-1]
 gi|319995313|dbj|BAJ64084.1| succinyl-CoA synthetase beta chain [Anaerolinea thermophila UNI-1]
          Length = 380

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 183/397 (46%), Positives = 247/397 (62%), Gaps = 20/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ+KA+  +Y VP+ KG   +    A+   + L G + V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYQSKAIFHRYGVPIPKGRTTTMASEAKHFAEELGGKV-VIKAQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  + K        ILG  +        G  V  + V++     +E+YL
Sbjct: 57  -------GGIRLAKTPKEAEELATTILGMEI-------KGLPVRKILVDEAVSFEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  DR +     +AS  GG+DIEEVA+  P+KI K+ IDPL+G+       L   ++L 
Sbjct: 103 GITNDRGARRPVMMASAAGGVDIEEVARVSPEKIIKIHIDPLLGLREYQARDLAVSIDLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   L+KA+ + D +L EINPL+I  + +L  LD K+  DDNAL+RH D+ 
Sbjct: 163 RPLWRSFAEVAYGLWKAYTENDATLAEINPLVITSDKKLLALDGKMVVDDNALFRHPDLV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+  ED  EIEA++  LSYI+LDG IGCMVNGAGLAMATMDIIKL GG PANFLD+G
Sbjct: 223 EMRDLDAEDWAEIEARKFGLSYISLDGEIGCMVNGAGLAMATMDIIKLCGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KVAAA +II SD  VK +L NIFGGI RCD + +GIL+A+ EVK NIP+V+RL 
Sbjct: 283 GGAGAEKVAAALRIILSDPKVKAVLFNIFGGITRCDEVARGILTALAEVKPNIPMVVRLV 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G RL+AE+ +  ITA  L +AAQK V  VKG
Sbjct: 343 GTNAEEGRRLLAEAKM--ITAETLLEAAQKAVAVVKG 377


>gi|256425554|ref|YP_003126207.1| succinyl-CoA synthetase subunit beta [Chitinophaga pinensis DSM
           2588]
 gi|256040462|gb|ACU64006.1| succinyl-CoA synthetase, beta subunit [Chitinophaga pinensis DSM
           2588]
          Length = 404

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 191/405 (47%), Positives = 255/405 (62%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQAK LL+KYNVPV +G+ + +  AA  A K L         VVK+QIHAGGRGK
Sbjct: 1   MNLHEYQAKELLKKYNVPVQEGIPVDTPEAAAEAYKQLKVQYGNEFAVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
           G  +      + GV V  + + V +    ILG  L+T QTG  G  VN V V       G
Sbjct: 61  GTIR---GKEQRGVAVGKNAEDVKTIAGNILGGVLVTIQTGEAGKLVNKVLVAQDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            + ++E YLS+L+DR  G    + ST+GGMDIEEVA + P KIFK L+ P   +      
Sbjct: 118 PNPIKEFYLSILLDRAKGQNVIMYSTEGGMDIEEVAHNTPDKIFKELVQPNTTLQPFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +     L G+A  +      NLY A+   D ++LEINPL    + ++  +D K++ DDN
Sbjct: 178 KIAFNFGLSGEAFKNMVKFVTNLYNAYVGLDAAMLEINPLFKTSDEKIIAVDCKLNLDDN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL RH D++ LRD++EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMD+IKL GG
Sbjct: 238 ALMRHADLEALRDINEEDPTEVEAGKFNLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG A+   V A F+II  D  VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 298 EPANFLDVGGTANAQTVEAGFRIILKDPKVKAILINIFGGIVRCDRVAQGVIDAYQSIGD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +  AV
Sbjct: 358 IKVPIIVRLQGTNAEEAKKLIEESGLKVQSAILLSEAAALVNKAV 402


>gi|21243962|ref|NP_643544.1| succinyl-CoA synthetase subunit beta [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|24212434|sp|Q8PHL5|SUCC_XANAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21109574|gb|AAM38080.1| succinyl-CoA synthetase beta subunit [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 389

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|320354457|ref|YP_004195796.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Desulfobulbus
           propionicus DSM 2032]
 gi|320122959|gb|ADW18505.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 385

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 184/395 (46%), Positives = 256/395 (64%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L RK+NVP  KG +  +    E   +    P+ VVK+Q+HA         
Sbjct: 1   MKIHEYQAKELFRKFNVPTPKGKLALTSDEVEKIAEEFGYPV-VVKAQVHA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V      I+G TL+TKQTG  G +V  V VE+G +I +ELYL
Sbjct: 51  -GGRGKGGGVKLAKTKADVKPVADSIIGMTLVTKQTGAQGKKVRKVLVEEGLNIKKELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  VA + S  GGMDIEEVA   P++I  + + P+ G        +C  LE++
Sbjct: 110 SIIPDRETATVAIVCSQDGGMDIEEVAAKTPERIITVNVSPITGFQPFHARKICFGLEIE 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     L  NLY+ F   D S++EINPLII   G +  LD+K+  D NA++RH D++
Sbjct: 170 KDLQKQMSALVKNLYELFMAYDCSMVEINPLIITAEGNILALDAKMDIDGNAMFRHPDVK 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+ EED  E EA Q  L+YI LDGN+G +VNGAGLAMATMDI+KL G +PANFLDVG
Sbjct: 230 EMRDIDEEDPVEAEAAQFGLNYINLDGNVGNIVNGAGLAMATMDIVKLAGASPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + +   F++I  D +VKGILIN+FGGI+RCD+L KG++ A  ++K+++P+V+R+E
Sbjct: 290 GGANAEAIENGFRLIMKDPAVKGILINVFGGILRCDILAKGVVQAATKLKLSVPVVVRME 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+ G R++AESGL++I A DL DAA+K+   V
Sbjct: 350 GTNVEEGRRILAESGLDLINAKDLADAAEKVAKIV 384


>gi|78048905|ref|YP_365080.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294625819|ref|ZP_06704436.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666979|ref|ZP_06732208.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325927500|ref|ZP_08188739.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           perforans 91-118]
 gi|123584384|sp|Q3BQ83|SUCC_XANC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78037335|emb|CAJ25080.1| succinyl-CoA synthetase beta subunit [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292599894|gb|EFF44014.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603268|gb|EFF46690.1| succinyl-CoA synthetase subunit beta [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325542127|gb|EGD13630.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           perforans 91-118]
          Length = 389

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|167463747|ref|ZP_02328836.1| succinyl-CoA synthetase subunit beta [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 345

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 186/355 (52%), Positives = 241/355 (67%), Gaps = 10/355 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K +LR+Y V V +G V  S   A  A K L  P+ V+K+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEVLRQYGVSVPQGKVAFSPEEAVEAAKALGTPVVVIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   E+LG  L+T QTGP G  V  + +E G DI +E Y+
Sbjct: 58  -------GGVKIAKNLDEVRTYAGELLGKVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +G +  +AS +GG +IEEVA   P+KIFK ++DP IG+       L   + + 
Sbjct: 111 GVVVDRGTGRIVMMASEEGGTEIEEVAAKTPEKIFKEVVDPAIGLQPFQARKLAYAVHIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY AF DKD S+ EINPL++  +G +  LD+K++FD NALY+H DI 
Sbjct: 171 DELVNKAVKFMMALYDAFVDKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYQHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EI+A + +LSYIALDGNIGCMVNGAGLAM+TMDIIK YGG PANFLDVG
Sbjct: 231 ELRDLDEEDEKEIQASKFDLSYIALDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           GGA ++KV  AFKII SD  VKG+ INIFGGIMRCDV+ KG+++AVKE+ ++ PL
Sbjct: 291 GGATKEKVTEAFKIILSDEKVKGVFINIFGGIMRCDVIAKGVVAAVKELGLDRPL 345


>gi|300769985|ref|ZP_07079864.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762461|gb|EFK59278.1| succinate--CoA ligase (ADP-forming) [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 397

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 180/407 (44%), Positives = 251/407 (61%), Gaps = 20/407 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V + +G+V  +   A  A K +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKQILKSFGVTIQEGIVADTPEQAVEAAKKMKEDYNSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  +L+ V     +I+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNLEEVKQRATDIIGMQLVTPQTGPEGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ASETKEFYMSVLLDRATGRNIVMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLSGPAHKEMVKFVAALYKAYDATDSSMFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RDV+EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDYAAMRDVTEEDPTEVEAGESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 EPANFLDVGGTANAETVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +   +KG
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLKVYSAILLKEAADLVTKVLKG 397


>gi|325921600|ref|ZP_08183441.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325922867|ref|ZP_08184591.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325923846|ref|ZP_08185455.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325545680|gb|EGD16925.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325546660|gb|EGD17790.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325547911|gb|EGD18924.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           gardneri ATCC 19865]
          Length = 389

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 179/396 (45%), Positives = 260/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A  A  +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEAANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|325104471|ref|YP_004274125.1| succinyl-CoA synthetase, beta subunit [Pedobacter saltans DSM
           12145]
 gi|324973319|gb|ADY52303.1| succinyl-CoA synthetase, beta subunit [Pedobacter saltans DSM
           12145]
          Length = 396

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 178/401 (44%), Positives = 248/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V+ +   A  A K +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKEILKSFGVRVQEGIVVDTPEEAVEAAKKMKEDFGSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  +L  V     +I+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKQRATDIIGMQLVTPQTGPEGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R++G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ESETKEFYVSVLLNRSTGRNIIMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L   G A  +       LYKA+   D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGTSGNAFKEMVKFITALYKAYDAIDASMFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH DI  +RD++EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALYRHPDIAAMRDITEEDPTEVEAGESNLNYVKLDGNVGCMVNGAGLAMATMDIIKLAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG A+   V AAF II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 DPANFLDVGGTANAQTVKAAFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGD 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +
Sbjct: 351 IKVPIIVRLQGTNAEEAKKLIDESGLKVYSAILLKEAADLV 391


>gi|58581216|ref|YP_200232.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623133|ref|YP_450505.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|188575735|ref|YP_001912664.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75435994|sp|Q5H2H4|SUCC_XANOR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123522578|sp|Q2P5E6|SUCC_XANOM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734999|sp|B2ST87|SUCC_XANOP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|58425810|gb|AAW74847.1| succinyl-CoA synthetase beta subunit [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367073|dbj|BAE68231.1| succinyl-CoA synthetase beta subunit [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|188520187|gb|ACD58132.1| succinyl-CoA synthetase beta chain [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 389

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|164656989|ref|XP_001729621.1| hypothetical protein MGL_3165 [Malassezia globosa CBS 7966]
 gi|159103514|gb|EDP42407.1| hypothetical protein MGL_3165 [Malassezia globosa CBS 7966]
          Length = 426

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 164/387 (42%), Positives = 234/387 (60%), Gaps = 4/387 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL KY +   K         A  + K   G   VVK+Q+ AGGRGKG F 
Sbjct: 32  LSIHEYLSMGLLNKYGINTPKFFPAKDSDEAYLSTKKFDGKPVVVKAQVLAGGRGKGHFD 91

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV +  S +       +++GS LITKQTG  G   N V + +      E Y+
Sbjct: 92  N---GLQGGVHLVKSAEEARDLTGKMVGSKLITKQTGAAGRVCNSVMIAEARTPKHEYYV 148

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR   +   IAS QGGM IEEVAK+ P  I    ID   G+  E    +   L   
Sbjct: 149 AILNDRVRQLPVLIASNQGGMSIEEVAKENPDAIITTPIDYTKGLDMETAKQVAHKLGFS 208

Query: 181 GQARI-DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G+ +  +  D F  LYK F ++D + +EINPL   ++G +  +D+K+ FD++A +R  ++
Sbjct: 209 GEQQENEAADTFVKLYKLFRERDATQVEINPLAESEDGAVLCMDAKLGFDEHADFRQKEV 268

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E+RD+++ED  E+ A ++ L++I LDGNIGC+VNGAGLAMAT+D++ L GG PANFLDV
Sbjct: 269 FEMRDLTQEDPSEVRASRYGLNFIKLDGNIGCLVNGAGLAMATLDLLSLNGGKPANFLDV 328

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+ + V  AF+I+     V+ IL+NIFGGIMRCDV+ +GI+ A KE+++ IPLV+RL
Sbjct: 329 GGGANAEAVKKAFEIVLEGEGVRAILVNIFGGIMRCDVIAEGIIKATKEMELKIPLVVRL 388

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
           +G        LI +SGL +    DLD+
Sbjct: 389 QGTKEQEAKELIRQSGLKIQAYNDLDE 415


>gi|315124057|ref|YP_004066061.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315017779|gb|ADT65872.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 387

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 247/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVSIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|307825853|ref|ZP_07656069.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
 gi|307733161|gb|EFO04022.1| succinyl-CoA synthetase, beta subunit [Methylobacter tundripaludum
           SV96]
          Length = 388

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 186/396 (46%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L   Y++PV  G   ++  +AE   K L G  +VVK+Q+HA         
Sbjct: 1   MNIHEYQAKQLFLHYSIPVPDGKQATTPESAEQVAKELGGDGWVVKAQVHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V    R +LG  L+TKQTG  G  +N + +E    I RELYL
Sbjct: 52  -GGRGKVGGVKLAKTPAEVAEFSRGMLGKRLVTKQTGAEGLPINSLLIEKTYPIKRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S  + FIAS+ GGMDIE VA + P++I  + + P  G+       +   L L+
Sbjct: 111 SVLVDRGSERIIFIASSAGGMDIETVAHETPEQIISVPVHPAAGLQGYQCRKVAYALGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LY  F  KD S +EINPLI   NG L  LD+KI+FDDNA+  H DI+
Sbjct: 171 GSQIKALGKIMQGLYDLFLAKDASQIEINPLIETDNGELIALDAKINFDDNAVEVHPDIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D  +ED +E +A+Q  L+YI L+GNIGCMVNGAGLAMATMD++KL GG PANFLDVG
Sbjct: 231 AMKDADQEDEKENKAQQFGLNYITLEGNIGCMVNGAGLAMATMDLVKLKGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   +KV  AFK+I SD SVK +L+NIFGGI++CD++  GIL+AV++V + +P+V+RLE
Sbjct: 291 GGTSVEKVCEAFKLILSDHSVKAVLVNIFGGIVQCDIIAAGILAAVEQVHVAVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G  L++ +GLN+  A DL  AA+++V   +
Sbjct: 351 GTNAEQGRALLSNTGLNLYAADDLAHAAEQVVALAE 386


>gi|34557448|ref|NP_907263.1| succinyl-COA synthetase BETA chain [Wolinella succinogenes DSM
           1740]
 gi|81832991|sp|Q7M9A6|SUCC_WOLSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|34483164|emb|CAE10163.1| SUCCINYL-COA SYNTHETASE BETA CHAIN [Wolinella succinogenes]
          Length = 392

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 183/396 (46%), Positives = 250/396 (63%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL +Y V + +G V  +   A    + L G ++ +K+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKALLAQYGVGIPRGGVAETPAEATVIAQRLGGEIWAIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + +LGS LIT QT   G  V+ VYVE+G  I RE YL
Sbjct: 58  -------GGVKLAKTPEEAGEIAKAMLGSRLITHQTSLEGKEVHKVYVEEGLGIEREYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR+  M   +AS QGG+DIEEVAK+ P +I K+ +DP+IG        L   L L 
Sbjct: 111 GIVLDRSLEMPVIMASRQGGVDIEEVAKNSPNEIIKVAVDPMIGFRPFHGRKLAFALGLA 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D   +L++ +  KD  ++EINPL+     R   LD+KISFD+NALYRH +I 
Sbjct: 171 KEQVGLFVDFCTSLFRLYVQKDAEIVEINPLVFTSCKRFVALDAKISFDNNALYRHPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+SEE+S EIEA ++NL+Y+ L GN+GCMVNGAGLAMATMDIIK  GG PANFLDVG
Sbjct: 231 AMRDLSEEESSEIEAGEYNLNYVKLQGNVGCMVNGAGLAMATMDIIKHEGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA  F+II  D +VK I +NIFGGI+RCD +  GIL A K V +++P+V+RL+
Sbjct: 291 GGAKPETVAKGFEIILKDPNVKAIFVNIFGGIVRCDRVANGILEAAKIVHVSVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           G N      ++ ++ +  +  A  L+  A+K V   
Sbjct: 351 GTNAKEAKEILEQANIPNIFAAPSLEGGAKKAVELA 386


>gi|326474990|gb|EGD98999.1| succinyl-CoA ligase beta-chain [Trichophyton tonsurans CBS 112818]
 gi|326483203|gb|EGE07213.1| succinyl-CoA ligase beta-chain [Trichophyton equinum CBS 127.97]
          Length = 415

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 171/384 (44%), Positives = 239/384 (62%), Gaps = 3/384 (0%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F       KGGVRV  
Sbjct: 19  YGVGVPKGEVARSGEEAEAIAKNIGGEDMVIKAQVLAGGRGKGTFDN---GLKGGVRVIY 75

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S         +++G  LITKQTG  G   N VY+ +     RE YL++L+DR +     +
Sbjct: 76  SPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIV 135

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
           +S+QGGMDIE VAKD P  I    ID   GVT +   ++   L    Q   +  +    L
Sbjct: 136 SSSQGGMDIEAVAKDTPDAITTTPIDIHTGVTDQIARNIATGLGFSEQCVPEAVETIKKL 195

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           YK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++   RD ++ED+ E++
Sbjct: 196 YKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVFSWRDTTQEDADEVK 255

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVGGGA    + +AF++
Sbjct: 256 AAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVGGGATPAAIRSAFEL 315

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+G N++  + LI+ES
Sbjct: 316 ITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQGTNMEKAHALISES 375

Query: 375 GLNVITAIDLDDAAQKIVHAVKGV 398
           GL + +  DL  AA+K V   K V
Sbjct: 376 GLKIFSIEDLQVAAEKSVQFSKVV 399


>gi|195445339|ref|XP_002070282.1| GK11971 [Drosophila willistoni]
 gi|194166367|gb|EDW81268.1| GK11971 [Drosophila willistoni]
          Length = 524

 Score =  434 bits (1117), Expect = e-120,   Method: Composition-based stats.
 Identities = 181/398 (45%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + ++P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESDIPTPRFAVAKNGKEAHDIATKLKTDNLVLKAQVLAGGRGKGAFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    +S      +++   L+T+QTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPESAEQITSKMVDQLLVTRQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID   G+T+E  A + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKESPDAIIYEPIDITKGLTNEQAAKIVNKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   +  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDNADEHVQMLLNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SLRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRSSGLKILARDDLDKAADLAVHLAQIV 432


>gi|325916243|ref|ZP_08178524.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537537|gb|EGD09252.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 389

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLY+ F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYRLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLI 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|289662934|ref|ZP_06484515.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667062|ref|ZP_06488137.1| succinyl-CoA synthetase subunit beta [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 389

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLI 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|156546288|ref|XP_001605967.1| PREDICTED: similar to ENSANGP00000017707 [Nasonia vitripennis]
          Length = 449

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 162/384 (42%), Positives = 238/384 (61%), Gaps = 5/384 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE QA  LL+   +P  K  V  +   A    + L     V+K+Q+ AGGRGKG+F 
Sbjct: 35  LNVHENQAYTLLKSMGIPTPKFGVAKTPEEAAEIARELDSKDLVLKAQVLAGGRGKGKFS 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV +  + +       ++LG  L+TKQTG  G   N V +       +ELYL
Sbjct: 95  GSNVS---GVVMCETPEEAKELASKMLGKYLVTKQTGEVGRICNEVMITTRMFTRKELYL 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++++R+      IAS++GG++IE++A   P+ I    +D   G+T E   ++     + 
Sbjct: 152 SVMMERSFDGPVIIASSEGGVNIEDIAATNPEAISYTPVDIRKGLTCEQADAIACRFGVG 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++  NLY+ F +KD  LLEINPL+    G+   LD K +FDD+A +R  D+ 
Sbjct: 212 DPRV--LSEIVCNLYELFIEKDALLLEINPLVQDICGQYFALDCKCNFDDSASFRQKDLF 269

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D S+++  E++A +  L+YIALDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 270 ALQDWSQKNPMEVKADKIGLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 329

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKII+SD  V+ I +NIFGGI+RCDV+ +GI++A +++K+N+P+++RL+
Sbjct: 330 GGASVKTVTEAFKIISSDPKVESIFVNIFGGIIRCDVIAEGIIAAFQDLKLNVPVIVRLQ 389

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N + G +LI ++ L +I   D+
Sbjct: 390 GTNAEKGKKLIMDAKLKIIPIDDM 413


>gi|213408347|ref|XP_002174944.1| succinyl-CoA ligase beta-chain [Schizosaccharomyces japonicus
           yFS275]
 gi|212002991|gb|EEB08651.1| succinyl-CoA ligase beta-chain [Schizosaccharomyces japonicus
           yFS275]
          Length = 428

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 170/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           IHE  +  +LRKY V V +G V  +   AE     L     V+K+Q+ AGGRGKG F   
Sbjct: 20  IHECYSHDILRKYGVDVPRGAVARTGDEAEKVAHNLKTDDLVIKAQVLAGGRGKGHFD-- 77

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               KGGVR+            +++G  LITKQTG  G   N VYV +   I +E Y ++
Sbjct: 78  -TGLKGGVRIIYDPIEAKMFADQMIGHRLITKQTGAAGKPCNMVYVCERKYIRKEYYFAI 136

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           L+DR +     +AS+QGG++IE VA + P  I + L+     + +     L D L +  Q
Sbjct: 137 LMDRQNKCPVIVASSQGGVNIEAVAAENPSAILQRLVPNKPTLDTRIAKELVDELGVSPQ 196

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            +    D    LYK F D D + +EINP+    + R+  +D+K+ FDDNAL+RH D+  L
Sbjct: 197 CKAQAVDTITKLYKVFNDTDATQVEINPMAETTDQRVLCMDAKLKFDDNALFRHKDLLAL 256

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           RD S+ED  EI A +  L++I LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVGG 
Sbjct: 257 RDESQEDPDEIRASRCGLNFIKLDGSIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGS 316

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A+ + +  AF +I  D  +  I +NIFGGI+RCDV+ +G++S V  +K+NIP++ RL+G 
Sbjct: 317 ANAEAIREAFGLIVKDPKITAIFVNIFGGIVRCDVIAQGLISVVSSMKLNIPIIARLQGT 376

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKI------VHAVK 396
           N +    +IA SGL + +  +LD+AA K       V   +
Sbjct: 377 NQEAAKEVIANSGLRIFSFDELDEAASKACRFSRVVEMAR 416


>gi|166713134|ref|ZP_02244341.1| succinyl-CoA synthetase subunit beta [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 389

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 259/396 (65%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVDVATSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA +R   + 
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQLI 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E+ A + +++Y+ +DGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 AMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA++ +V  AFK+I S   V+GI +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGANKQRVIEAFKLILSSDKVEGIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV+ G +L+ +SG+ +I A +++D A+K+V AVK
Sbjct: 351 GTNVEEGKQLLRDSGMAIIPADNINDGAKKVVEAVK 386


>gi|86151734|ref|ZP_01069948.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|283955955|ref|ZP_06373445.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|85841363|gb|EAQ58611.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|283792615|gb|EFC31394.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 387

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 247/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|218551370|ref|YP_002385162.1| succinyl-CoA synthetase subunit beta [Escherichia fergusonii ATCC
           35469]
 gi|218358912|emb|CAQ91573.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia
           fergusonii ATCC 35469]
 gi|324112302|gb|EGC06280.1| succinate-CoA ligase [Escherichia fergusonii B253]
 gi|325499639|gb|EGC97498.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia
           fergusonii ECD227]
          Length = 389

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 262/398 (65%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQALRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E  I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEASITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAVEGQRLLAESGLTVEAVDSLDDAAKRIIALL 388


>gi|118580136|ref|YP_901386.1| succinyl-CoA synthetase subunit beta [Pelobacter propionicus DSM
           2379]
 gi|189081765|sp|A1APQ8|SUCC_PELPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118502846|gb|ABK99328.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pelobacter
           propionicus DSM 2379]
          Length = 394

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 175/395 (44%), Positives = 244/395 (61%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L  + + + +G V  +    E A + L G   V+K+Q++A         
Sbjct: 1   MKIHEYQAKDILAGFGIAIPRGRVAMNASQVERAARELGGHC-VIKAQVYA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+RV           +E+LG+ L+T QTGP G  V  + VE+  DI RELYL
Sbjct: 51  -GGRGKGGGIRVAQDPGQAGEIAKELLGTKLVTPQTGPEGLEVRRLLVEEVVDIERELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR S     IAS +GGMDIEE+A+  P +I  L IDP IG+ S         L L 
Sbjct: 110 SITLDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSYQARRTALGLGLV 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  +L  NLY+   ++D SL+EINPL++   G L  +D+K++FDDNAL RH +  
Sbjct: 170 GPLCEECVELILNLYRCLLERDCSLVEINPLVVTNAGWLVAMDTKMTFDDNALQRHCEYP 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D S+ +  EI A + +LSYI L G IGCMVNGAGLAMAT+D++K  GG PANFLDVG
Sbjct: 230 DLVDYSQLNPLEIAAARFDLSYIKLSGAIGCMVNGAGLAMATLDVLKEAGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA AF+II  D  V+G+ +NIFGGIMRCD++ +GI+ A       +P+V+R++
Sbjct: 290 GGASREKVAEAFRIILQDRDVRGVFVNIFGGIMRCDIIAQGIIDAASGGGCRLPIVVRMD 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  V+ G +L+ ESGLN+    ++ D AQ+IV  +
Sbjct: 350 GNRVEEGKQLLRESGLNIRIGENMGDGAQQIVAML 384


>gi|189184256|ref|YP_001938041.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Ikeda]
 gi|226734968|sp|B3CTW0|SUCC_ORITI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189181027|dbj|BAG40807.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Ikeda]
          Length = 386

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/395 (47%), Positives = 260/395 (65%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L KYNVP+  G+ I      + AI +L    +V+K+QIHA         
Sbjct: 1   MNIHEYQAKEILSKYNVPIQPGIAILKYEDIDYAIDSLATDTFVIKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +      +  + + G  L+T QTGP G +V  +Y+E  A I  ELYL
Sbjct: 52  -GGRKIGGGIKISNDKNEAKNLAKNMWGMNLVTPQTGPKGQKVQRIYIESAAKIKLELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR++  + F+AS++GG++IEEVA   P KI K+ I+ L G+       +   L L 
Sbjct: 111 GAVIDRSNHCITFMASSEGGINIEEVAHTNPDKIIKVKINILTGIQPFHSRKIIFQLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y    + D + +EINPLII  + +L  LD+KI+FDD+AL+R   IQ
Sbjct: 171 GDLAKQMAKIMSAVYSMLINTDATQVEINPLIITLDDKLIALDAKINFDDSALFRQPLIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD  EED  E+ A + +LSY+ ++GNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 EMRDEDEEDQLELRATKADLSYVRMNGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD+++VA A KII+SD +VKGILINIFGGIMRCD++ +G+L+A KE+ ++IPLV+RL 
Sbjct: 291 GSADKERVAEALKIISSDQNVKGILINIFGGIMRCDIIAEGVLAAAKEINLSIPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G  +++ S L ++ A DLDDAA+KIV AV
Sbjct: 351 GTNFELGKEILSNSKLQIVAANDLDDAARKIVEAV 385


>gi|332023778|gb|EGI64002.1| Putative succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Acromyrmex echinatior]
          Length = 424

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 172/397 (43%), Positives = 250/397 (62%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLR   + V    ++  +    SA++ L    +V+K+Q+ AGGRGKG F 
Sbjct: 30  LNLLEYQSKELLRDSGISVQNFTIVEDLTQMNSALEKLHTDEFVIKAQVLAGGRGKGWFD 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +     +V + ++ +LG  LITKQT   G  V  + + +  DI RE Y+
Sbjct: 90  N---GFKGGVHLTKDRNAVANYVKNMLGHRLITKQTSKDGILVQKIMIAESVDIARETYV 146

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA+ YP++I  + +D   G+  E    +C  L   
Sbjct: 147 CILMDRQHNGPVLIASPAGGMDIEAVAEKYPEQIKTVTLDIYHGIDDEIAKDVCVFLGFS 206

Query: 181 GQAR-IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                        NL+K F D D   +EINPL+   + ++  +D+KI+FDDNA +R  D+
Sbjct: 207 DTDILKKAIYELKNLWKLFVDIDALQVEINPLVETTDKQVVAVDAKIAFDDNAQFRQQDL 266

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D+SE+D RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLD+
Sbjct: 267 FALEDISEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDI 326

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   +D+V  AF+I++ D  VK IL+N+FGGI+ C  + KGI++A + + + IP V+RL
Sbjct: 327 GGNVKEDQVFQAFRILSEDPKVKVILVNVFGGIVNCVTIAKGIIAAAQNLGLKIPFVVRL 386

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG NV    ++++ESG  ++TA +LD+AA+K V +VK
Sbjct: 387 EGTNVTEAKKVLSESGFPILTASNLDEAAKKAVISVK 423


>gi|331650070|ref|ZP_08351143.1| succinate-CoA ligase, beta subunit [Escherichia coli M605]
 gi|331041015|gb|EGI13172.1| succinate-CoA ligase, beta subunit [Escherichia coli M605]
          Length = 389

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNETRITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRIIALL 388


>gi|73666781|ref|YP_302797.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ehrlichia canis
           str. Jake]
 gi|123615114|sp|Q3YSV6|SUCC_EHRCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|72393922|gb|AAZ68199.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ehrlichia canis
           str. Jake]
          Length = 386

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 205/396 (51%), Positives = 263/396 (66%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L ++ V V KG ++ S+   + AI  L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKHILSRFGVSVPKGAIVHSLSEVDDAISKLHSKVIVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +     + I+ +LGSTL+T QT   G +V  VY+E+G DI +E Y+
Sbjct: 58  -------GGVVVCRTSDEAKASIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +V+R    V+ I ST+GG+DIEEVA   P+K+    IDPL G  S    +LC    L 
Sbjct: 111 SAIVNRKQSQVSIIFSTEGGVDIEEVASTSPEKVIVCNIDPLFGFQSFHGRNLCFDSNLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +YK     D + +EINPL+   +G    LD+KI+FDDNALYRH DIQ
Sbjct: 171 LDQTRKISDIAEKIYKVMLSTDANQVEINPLVETSSGNFIALDAKINFDDNALYRHPDIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE   EIEA ++ L+YI +DGNIGCMVNGAGLAMATMDIIK YG  PANFLDVG
Sbjct: 231 ELRDYDEEIKEEIEASKYGLNYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q  V  AFKII SD  V GIL+NIFGGIMRCD++  GI++A++E++IN+PLV+RL 
Sbjct: 291 GGASQKTVTEAFKIILSD-KVDGILVNIFGGIMRCDIIANGIIAAIEEIRINVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +L+ +S LN+ITA DL +AA  IV+ VK
Sbjct: 350 GTNFELGKKLLDDSSLNIITANDLSEAAYNIVNIVK 385


>gi|306815831|ref|ZP_07449976.1| succinyl-CoA synthetase beta chain [Escherichia coli NC101]
 gi|305850806|gb|EFM51262.1| succinyl-CoA synthetase beta chain [Escherichia coli NC101]
          Length = 389

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFATFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNETRITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRIIALL 388


>gi|194867056|ref|XP_001971996.1| GG14126 [Drosophila erecta]
 gi|190653779|gb|EDV51022.1| GG14126 [Drosophila erecta]
          Length = 416

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL    NG +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDNGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|72171322|ref|XP_786521.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115697859|ref|XP_001203128.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 426

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 173/393 (44%), Positives = 250/393 (63%), Gaps = 3/393 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+++Y+V V K +V      A    K L     V+K+QI AGGRGKG F 
Sbjct: 34  LNLQEYQSKKLMQQYDVNVQKFMVADDAQQAVQQGKDLDVREIVLKAQILAGGRGKGTF- 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +  +   +   + +++G+ L TKQT   G  V  V V +  DI RE YL
Sbjct: 93  --TSGLKGGVHLTKNPNDLGPLVEQMIGAKLTTKQTPKDGVLVKKVMVAEALDIERETYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       I S  GG+DIEEV++  P+ I+K+ ID  IG+T E   ++   L+ +
Sbjct: 151 AILMDRGMMGPVLIGSPAGGVDIEEVSEKTPELIYKVPIDITIGITDEQALTMAKNLDFK 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D   NLY+ F   D + +E+NP     +GR+   D+KI+FDDNA +R  ++ 
Sbjct: 211 GDLIRVAADQIKNLYELFLGVDATQVEVNPFGETDDGRVVCFDAKINFDDNAEFRQKEVF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D++E D +E+ A +HNL+YI++DGNIGC+VNGAGLAMATMDIIKL+GG PANFLD G
Sbjct: 271 AMDDMTEADPKEVLAAEHNLNYISMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDCG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK+I+SD +VK IL+N+FGGI+ C ++  GI SA + + + +PLV+RL 
Sbjct: 331 GGVGEGQVFEAFKLISSDENVKAILVNVFGGIVDCSIIANGITSACRGMDLKVPLVVRLA 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G NV+    ++ ESGL +  A DL+DAA+K V 
Sbjct: 391 GFNVEKATSILHESGLPIKIAADLEDAAKKAVA 423


>gi|332292722|ref|YP_004431331.1| succinyl-CoA synthetase, beta subunit [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170808|gb|AEE20063.1| succinyl-CoA synthetase, beta subunit [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 396

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 177/405 (43%), Positives = 247/405 (60%), Gaps = 21/405 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G V  +   A +A + L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILNSFGVRIQRGYVAQTPDEAVAAAERLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL  V S   +I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLDEVRSIADQIIGMDLVTPQTSAEGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRGTGRNMIMYSTEGGMDIETVAEETPHLIFHEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+ D D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGAAFKDMTKFVAALYKAYTDSDSSLFEINPVLKTSDDKIMAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR  +   +RD  EE+  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRRKEYAAMRDKREENQVEVEAGEKGLNYVDLDGNVGCMVNGAGLAMATMDLIKQSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD ++V AAF++I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVEAAFQLILKDPAVKAILVNIFGGIVRCDRVAQGIIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           IN+P+++RL+G N DI  +LI +SGL+V +AI+  +AA K V AV
Sbjct: 351 INVPIIVRLQGTNADIAKKLIDDSGLDVQSAIEFQEAADK-VQAV 394


>gi|57167578|ref|ZP_00366718.1| succinyl-CoA synthase, beta subunit [Campylobacter coli RM2228]
 gi|305433084|ref|ZP_07402240.1| succinyl-CoA synthase [Campylobacter coli JV20]
 gi|57020700|gb|EAL57364.1| succinyl-CoA synthase, beta subunit [Campylobacter coli RM2228]
 gi|304443785|gb|EFM36442.1| succinyl-CoA synthase [Campylobacter coli JV20]
          Length = 387

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 246/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A    K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVEEAVENAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASAETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKAILDSSNLKNIKAATNLKNGAELVKSLV 386


>gi|224129596|ref|XP_002320625.1| predicted protein [Populus trichocarpa]
 gi|222861398|gb|EEE98940.1| predicted protein [Populus trichocarpa]
          Length = 421

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/388 (48%), Positives = 257/388 (66%), Gaps = 6/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KGV +SS+   + AI+ +       VVKSQ+ AGGRG G+
Sbjct: 27  LNIHEYQGAELMGKYGVNVPKGVAVSSLDEVKKAIQDVFPGESELVVKSQVLAGGRGLGK 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      +GGV +      +     ++LG  L+TKQTG  G  V+ VY+ +   ++ E+
Sbjct: 87  FKN---GFQGGVHIVK-ADKIEETAGKMLGQILVTKQTGSQGKIVSKVYLCEKLSLVNEM 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++++DRTS     IA  +GG  IE++A+ +P  I K+ ID   G+T ED A + D L 
Sbjct: 143 YFAIMLDRTSAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDAAKVVDGLA 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +   R +  +    LYK FC+ D +LLEINP+    + +L   D+K++FDDNA +R  +
Sbjct: 203 PKVADRNNSIEQVKKLYKLFCECDCTLLEINPIAETSDKQLVAADAKLNFDDNAAFRQKE 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD ++ED RE+ A   +L+YI LDG IGCMVNGAGLAMATMDI+KL+GG PANFLD
Sbjct: 263 IFALRDPTQEDPREVAAAMADLNYIGLDGEIGCMVNGAGLAMATMDIVKLHGGTPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V + +P+V+R
Sbjct: 323 VGGNASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVR 382

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NVD G R++ ESG+ +ITA DLDD
Sbjct: 383 LEGTNVDQGKRILKESGMALITAEDLDD 410


>gi|86153239|ref|ZP_01071443.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85842965|gb|EAQ60176.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 387

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 186/396 (46%), Positives = 246/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QT P G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTRPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTTEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILKATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|78777248|ref|YP_393563.1| succinyl-CoA synthetase, beta subunit [Sulfurimonas denitrificans
           DSM 1251]
 gi|123550305|sp|Q30RQ3|SUCC_SULDN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78497788|gb|ABB44328.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sulfurimonas
           denitrificans DSM 1251]
          Length = 391

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 179/386 (46%), Positives = 244/386 (63%), Gaps = 12/386 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  KY VP  KG++  SV  A +  +TL G ++VVK+QIHA         
Sbjct: 1   MNIHEYQAKQIFAKYGVPTPKGLMAESVKQAVANAETLGGSIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL+ V    +EILG TL+T QTGP G  V  +Y+E+GADI  ELYL
Sbjct: 52  -GGRGLGGGVKLARSLEEVEQLSKEILGMTLVTHQTGPEGKLVQKLYIEEGADIKEELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
            +++DR   M   +AST+GGM IE+VA + P+KI K+ +DP IG        L   L + 
Sbjct: 111 GVVLDRAREMPVIMASTEGGMAIEDVAHNTPEKIIKIAVDPAIGFQGFHGRELVFGLGIT 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
               +         LYK + + D  ++EINPL+   +G    LD K+ FDD+AL RH DI
Sbjct: 171 DPNEQKKLISFASKLYKLYMENDAEMIEINPLVKTGSGEFLALDGKMGFDDSALGRHPDI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           +++RD+SEED+ E EA ++ LSY++LDG IGCMVNGAGLAM TMD I   GG PANFLDV
Sbjct: 231 EDMRDISEEDADEREAGKYGLSYVSLDGEIGCMVNGAGLAMGTMDTINYMGGTPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A+ + VA  F+II  +  VK I +NIFGGI+RCD +  GIL A K V +++P+++RL
Sbjct: 291 GGKANAETVAKGFEIILKNPKVKAIFVNIFGGIVRCDRIANGILEATKLVDVHVPVIVRL 350

Query: 360 EGANVDIGNRLIAESGL-NVITAIDL 384
           +G N +    ++ ++ + NVI A DL
Sbjct: 351 DGTNAEEAAAILRDANIANVIAATDL 376


>gi|198432563|ref|XP_002131966.1| PREDICTED: similar to succinate-Coenzyme A ligase, GDP-forming,
           beta subunit [Ciona intestinalis]
          Length = 432

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 168/400 (42%), Positives = 247/400 (61%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           +N+ EYQ+K L+  ++V V +  V+ S   A++A + +        VVK+ I AGGRGKG
Sbjct: 36  LNLQEYQSKKLMENFDVNVQRFKVVESAADAKNAAQHILDTNAKELVVKAMILAGGRGKG 95

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +F    +  +GGV + +    V    +++LG  L+TKQT   G  V  + V +  DI RE
Sbjct: 96  KF---SSGLQGGVHLTTDPTKVSDLCKDMLGYNLVTKQTSAEGVTVKKIMVAEALDITRE 152

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y ++L+DR+      + S  GGMDIEEVA+  P  IFK  ID   G+       + + L
Sbjct: 153 TYFAILMDRSYMGPVMVGSPAGGMDIEEVAEKTPHLIFKDPIDIDKGIQESQAIKMAENL 212

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              G+      +    LYK F   D + +EINPL    +G +   D+K++FDDNA +R  
Sbjct: 213 GFTGEKLQKAAEQITKLYKLFISVDATQVEINPLGETPDGDVVCFDAKVNFDDNAEFRQK 272

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +I  + D SE D +E+ A+++ LSYI++DGNI C+VNGAGLAMATMDII+  GG PANFL
Sbjct: 273 EIFLMDDKSESDPKEVVAEENGLSYISMDGNIACLVNGAGLAMATMDIIQHCGGRPANFL 332

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  + +V  AFKI+ SD+ V+ IL+NIFGGI+ C ++  GI+ A KE+ I++PLV+
Sbjct: 333 DLGGGVQEHQVYQAFKIVLSDTKVEAILVNIFGGIVDCKIIANGIVKAGKELNISMPLVV 392

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NV+    ++ ES L +++A D  DAA+K+V ++K 
Sbjct: 393 RLEGMNVNEAKEILKESNLPIVSANDFGDAAEKVVASLKS 432


>gi|86132927|ref|ZP_01051518.1| Succinyl-CoA synthetase, beta subunit [Dokdonia donghaensis MED134]
 gi|85816633|gb|EAQ37820.1| Succinyl-CoA synthetase, beta subunit [Dokdonia donghaensis MED134]
          Length = 396

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 178/405 (43%), Positives = 247/405 (60%), Gaps = 21/405 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILNSFGVRIQRGYVAQTPDEAVAAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL  V +   +I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLDEVKTIADQIIGMDLVTPQTSAEGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRGTGRNMIMYSTEGGMDIETVAEETPHLIFHEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+ D D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGAAFKDMTKFVAALYKAYTDSDSSLFEINPVLKTSDDKIMAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR  D   +RD  EE+  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRRKDYAAMRDKREENQVEVEAGEKGLNYVDLDGNVGCMVNGAGLAMATMDLIKQSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD ++V AAF++I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVEAAFQLILKDPAVKAILVNIFGGIVRCDRVAQGIIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           IN+P+++RL+G N DI  +LI +SGL+V +AI+  +AA K V AV
Sbjct: 351 INVPIIVRLQGTNADIAKKLIDDSGLDVQSAIEFKEAADK-VQAV 394


>gi|194741642|ref|XP_001953298.1| GF17693 [Drosophila ananassae]
 gi|190626357|gb|EDV41881.1| GF17693 [Drosophila ananassae]
          Length = 513

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 182/398 (45%), Positives = 242/398 (60%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNESKIPTPRFAVAKNGKEAHDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    K+      +++   LITKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPKTAEEISSKMIDQLLITKQTGAAGRLCKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P+ I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAATSPEAILYEPIDIDTGLTSEQAQKIIQKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      ++  NLYK F +KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GEGEEQHVEMLLNLYKLFVNKDALLVEINPYAEDALTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 432


>gi|157414814|ref|YP_001482070.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|189046903|sp|A8FKV6|SUCC_CAMJ8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157385778|gb|ABV52093.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747452|gb|ADN90722.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315931727|gb|EFV10682.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 387

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 246/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A S  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLATHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|307183642|gb|EFN70345.1| Probable succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Camponotus floridanus]
          Length = 421

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 250/396 (63%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLR   V V    ++  +    SA++ L    +V+K+Q+ AGGRGKG F 
Sbjct: 27  LNLLEYQSKELLRDSGVSVQNFAIVDDLSKTNSALEKLHADEFVIKAQVLAGGRGKGWFD 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +     +V + ++ +LG  LITKQT   G  V  + + +  DI  E Y+
Sbjct: 87  N---GFKGGVHLTKDRNAVSNYVKNMLGHRLITKQTSKDGILVQKIMIAESVDIAYETYI 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA+ YP+KI  + +D   G+  E    +C  L   
Sbjct: 144 CILMDRQYNGPVLIASPAGGMDIETVAEKYPEKIKTVPLDIYYGIDDEIAQDVCTFLGFS 203

Query: 181 GQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                        NL+K F D D   +EINPL+   + ++  +D+KI+FDDNA +R   +
Sbjct: 204 DPDVLNKAIYELKNLWKLFVDIDALQIEINPLVETTDKQVIAVDAKIAFDDNAQFRQQTL 263

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L DVSE+D RE++A ++NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLDV
Sbjct: 264 FALEDVSEKDPREVDASRYNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDV 323

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG   +D+V  AF+I++ D  VK IL+N+FGGI+ C  + +GI++A + + + IPLV+RL
Sbjct: 324 GGSVREDQVFQAFRILSEDPKVKAILVNVFGGIVNCITIARGIIAASQNLGLQIPLVVRL 383

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV    +++AESGL ++TA +LD+AA+K V +V
Sbjct: 384 EGTNVTEAKKVLAESGLPILTANNLDEAARKAVTSV 419


>gi|195491992|ref|XP_002093802.1| GE20552 [Drosophila yakuba]
 gi|194179903|gb|EDW93514.1| GE20552 [Drosophila yakuba]
          Length = 416

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/397 (47%), Positives = 259/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIDKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKSVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|195427883|ref|XP_002062006.1| GK17298 [Drosophila willistoni]
 gi|194158091|gb|EDW72992.1| GK17298 [Drosophila willistoni]
          Length = 416

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 259/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +K    P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAELVKKFDCPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSEVLSLSQQMIGNRLITKQTPKSGILVNKVMVARSVNITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    ++   +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKILTIPLDIGKPISESTLIKVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A     D    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDAIKRCADEIQKLYTLFKSVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +L D++EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 DL-DITEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++K+++PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLSVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV     ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVTKAREILKNSGLPIQTAADLDDAAHKAVAAL 415


>gi|110644396|ref|YP_672126.1| succinyl-CoA synthetase beta chain [Escherichia coli 536]
 gi|110345988|gb|ABG72225.1| succinyl-CoA synthetase beta chain [Escherichia coli 536]
          Length = 389

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRIIALL 388


>gi|281181129|dbj|BAI57459.1| succinyl-CoA synthetase beta subunit [Escherichia coli SE15]
          Length = 389

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 262/398 (65%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E  I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEASITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRIIALL 388


>gi|226941329|ref|YP_002796403.1| succinyl-CoA synthetase subunit beta [Laribacter hongkongensis
           HLHK9]
 gi|254778442|sp|C1DB55|SUCC_LARHH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226716256|gb|ACO75394.1| SucC [Laribacter hongkongensis HLHK9]
          Length = 388

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 198/396 (50%), Positives = 270/396 (68%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL KY +PV +G++ S+   A +A   L G   VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLAKYGLPVQQGILASNADEAAAAFDQLGGKFAVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S +        ++G  L+T QT   G  VN V V ED   + RELY
Sbjct: 58  -------GGVKVVKSREEAADVAATLIGKNLVTYQTDANGQPVNSVLVCEDMYPVERELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR++  V F+AST+GG++IEEVA + P+KI K+ +DPL+G+       +   L L
Sbjct: 111 LGAVVDRSTRRVTFMASTEGGVEIEEVAHNTPEKILKVTVDPLVGLLPFQAREVAFALGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +   +   L    Y+AF + D +L EINPL +  NG L  +D+K+  D NALYR   +
Sbjct: 171 KDKQVNEFVKLMTGAYRAFVENDFALFEINPLAVRANGALACVDAKVGIDSNALYRLPAV 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I +D SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILADPSVKGVLINIFGGIVRCDMIAEAIIAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G RL+ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGARLLEESGLKLTSAQGLNDAAEKIVAAV 386


>gi|331004890|ref|ZP_08328307.1| Succinyl-CoA ligase (ADP-forming) beta chain [gamma proteobacterium
           IMCC1989]
 gi|330421344|gb|EGG95593.1| Succinyl-CoA ligase (ADP-forming) beta chain [gamma proteobacterium
           IMCC1989]
          Length = 388

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 185/386 (47%), Positives = 251/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +PV+ GV  ++   A +A  T+ G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEYGLPVSTGVAAATAEEAAAATDTIGGDKWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V       LG  L+T QT   G  V+ + VE   DI +ELYL
Sbjct: 58  -------GGVKLVDSKAEVKEFAESWLGKNLVTYQTDANGQPVSRILVETCTDIDQELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +  + F+AST+GG++IE+VA++ P+KI K +IDPL+G        L   L L 
Sbjct: 111 GAVVDRATRSIVFMASTEGGVEIEKVAEETPEKILKAIIDPLVGAQPYQGRELAFKLGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F  L K F D D +LLEINPL+I   G L  LD KI+ D NALYR   I+
Sbjct: 171 PTQVKQFTKIFLGLAKMFEDFDFALLEINPLVITDEGNLHCLDGKINIDANALYRQPKIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D S+ED RE  A    L+Y+AL+GN+GCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 EMHDPSQEDEREAHAASFELNYVALEGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I SD+SVK +L+NIFGGI+RCD++ +GI+ AV+EV + +P+++RLE
Sbjct: 291 GGATKERVIEAFKLILSDTSVKAVLVNIFGGIVRCDMIAEGIIGAVEEVGVEVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G +L+  S LN++ A  L D
Sbjct: 351 GTNAEAGKKLLDASTLNLVGATSLTD 376


>gi|167041903|gb|ABZ06642.1| putative CoA-ligase [uncultured marine microorganism HF4000_133I24]
          Length = 390

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 174/396 (43%), Positives = 256/396 (64%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK +L  + + + +G +  S   AE   + + G  +VVK+QIH+G RGK    
Sbjct: 1   MDIHEYQAKKILSGFGISIPRGGIAYSPENAEYKAREIGGSKWVVKAQIHSGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ + +S   V     ++LG  L+TKQTGP G  V+ VY+E+  DI +ELYL
Sbjct: 58  -------GGIIICNSKLEVAQATDKLLGKKLVTKQTGPQGKIVHRVYIEEVTDIKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+ DR S  +  +AST+GGM +EE++K  P+ I +  I+  +G+       +   L ++
Sbjct: 111 GLVFDRASECIMVVASTEGGMSVEEISKKKPESIIRSKIEAAVGMQRFQAREIAFGLGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D     Y+AF + D +++EINPL+I K+  +  LD K+SFD+NAL+R   + 
Sbjct: 171 PKLISRTADAIIGCYRAFSELDATMVEINPLVISKDEHILALDCKMSFDNNALFRRNQVS 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD ++E+  E+ A    L+YI+L+GNIG ++NGAGLAMA+MD+IKL GG PANFLDVG
Sbjct: 231 ELRDKAQENPNEVYASDRGLNYISLEGNIGNIINGAGLAMASMDMIKLAGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +K+  AFK+I+ D  VK ILINIF GI RCD + +GI+ A++++KI++PL++RL 
Sbjct: 291 GGATPEKMVKAFKLISQDKKVKVILINIFAGINRCDWVAEGIVQALQKIKIDMPLIIRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  GN+++ ES +  I A  L+DAA K V A+K
Sbjct: 351 GTNVKKGNKILKESKIKYIEASTLEDAANKAVTALK 386


>gi|53804668|ref|YP_113446.1| succinyl-CoA synthase subunit beta [Methylococcus capsulatus str.
           Bath]
 gi|53758429|gb|AAU92720.1| succinyl-CoA synthase, beta subunit [Methylococcus capsulatus str.
           Bath]
          Length = 386

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 189/386 (48%), Positives = 253/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K LL  Y VPV +G V  S   A S    + G  + VK+Q+H+GGRGK    
Sbjct: 1   MNLHEYQSKRLLADYGVPVPRGGVAFSPDEARSCALQIGGERWAVKAQVHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   V +    +LGS L+T Q+G  G  V+ V VE+   I RE+YL
Sbjct: 58  -------GGVKLCSSEDEVAAAAHALLGSELVTSQSGGKGLPVHAVLVEEVRGIAREIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR+S  + F+AS +GGMDIE VA   P+KI    I P  G        +   L L 
Sbjct: 111 SVLVDRSSATIMFLASGEGGMDIEAVAAGSPEKILSSRIHPAAGFQPYQGRDIGYALGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L   +Y+ F +KD+S +EINPLI+   G L  LD+KI  DDNAL+ H ++ 
Sbjct: 171 AAQIGTLVRLMAGMYRLFVEKDLSQIEINPLIVTAEGELLALDAKIGIDDNALFAHPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED+RE  A++H LSY+ L GNIGCMVNGAGLAMATMD++KL+GG PANFLDVG
Sbjct: 231 GLRDASQEDARENAAREHGLSYVTLGGNIGCMVNGAGLAMATMDMVKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +KVA AFK+I SDS V+ +L+NIFGGI+RCD++ +G+++AV+EV++ +P+V+RLE
Sbjct: 291 GGATAEKVAEAFKLILSDSGVRAVLVNIFGGIVRCDLIAEGLIAAVREVRVGVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  L+  SGL +I A +LD+
Sbjct: 351 GTNAGEGRALLERSGLAIIAADELDE 376


>gi|57238267|ref|YP_178652.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni RM1221]
 gi|86149019|ref|ZP_01067251.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88597071|ref|ZP_01100307.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|148925903|ref|ZP_01809590.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|218562185|ref|YP_002343964.1| succinyl-CoA synthetase subunit beta [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|21264059|sp|Q9PHY1|SUCC_CAMJE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81353886|sp|Q5HVN3|SUCC_CAMJR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|57167071|gb|AAW35850.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni RM1221]
 gi|85840377|gb|EAQ57634.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190760|gb|EAQ94733.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359891|emb|CAL34679.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145844889|gb|EDK21993.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|315057951|gb|ADT72280.1| Succinyl-CoA ligase [ADP-forming] beta chain [Campylobacter jejuni
           subsp. jejuni S3]
 gi|315927031|gb|EFV06386.1| Succinyl-CoA synthetase subunit beta [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929566|gb|EFV08754.1| Succinyl-CoA synthetase subuint beta [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 387

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 246/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDTTEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|91213587|ref|YP_543573.1| SucC, succinyl-CoA synthetase subunit beta [Escherichia coli UTI89]
 gi|117626330|ref|YP_859653.1| SucC, succinyl-CoA synthetase beta chain [Escherichia coli APEC O1]
 gi|218561133|ref|YP_002394046.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           S88]
 gi|237703620|ref|ZP_04534101.1| SucC [Escherichia sp. 3_2_53FAA]
 gi|331660624|ref|ZP_08361556.1| succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           TA206]
 gi|91075161|gb|ABE10042.1| SucC, succinyl-CoA synthetase beta chain [Escherichia coli UTI89]
 gi|115515454|gb|ABJ03529.1| SucC, succinyl-CoA synthetase beta chain [Escherichia coli APEC O1]
 gi|218367902|emb|CAR05697.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           S88]
 gi|222035770|emb|CAP78515.1| SucC, succinyl-CoA synthetase beta chain (EC62 15) [Escherichia
           coli LF82]
 gi|226901532|gb|EEH87791.1| SucC [Escherichia sp. 3_2_53FAA]
 gi|294492570|gb|ADE91326.1| succinyl-CoA synthetase, beta subunit [Escherichia coli IHE3034]
 gi|307629112|gb|ADN73416.1| succinyl-CoA synthetase beta chain [Escherichia coli UM146]
 gi|312948635|gb|ADR29462.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315287844|gb|EFU47246.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           110-3]
 gi|315297529|gb|EFU56808.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           16-3]
 gi|323950393|gb|EGB46274.1| succinate-CoA ligase [Escherichia coli H252]
 gi|323954475|gb|EGB50259.1| succinate-CoA ligase [Escherichia coli H263]
 gi|324007782|gb|EGB77001.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           57-2]
 gi|331051666|gb|EGI23705.1| succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           TA206]
          Length = 389

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFATFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRIIALL 388


>gi|78485718|ref|YP_391643.1| succinyl-CoA synthetase, beta subunit [Thiomicrospira crunogena
           XCL-2]
 gi|123555360|sp|Q31FV4|SUCC_THICR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|78364004|gb|ABB41969.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thiomicrospira
           crunogena XCL-2]
          Length = 390

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 192/395 (48%), Positives = 260/395 (65%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK+L ++Y +PV KGV+I+ +   ++A+  +    +VVK+QIHAG RGK    
Sbjct: 1   MNLHEYQAKSLFQQYGIPVPKGVMINDLADLDAALGQIDSKGWVVKAQIHAGARGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       E+LGS+L T QT      +N + +E   DI +E YL
Sbjct: 58  -------GGVKLVETAEEAEQAASELLGSSLATIQTAGKALPINALLIEQTLDIYQEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL+VDR +    F+ S  GGMDIE VA+  P+KI  + +DP +G+       +   L L 
Sbjct: 111 SLMVDRVTKTHTFVISAAGGMDIELVAEASPEKILSVHVDPTVGLMPYQCREIAFALGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A      +    Y+   DKD+SLLEINPL++     L  LD+K++ D NALYR   + 
Sbjct: 171 GTAFKQMASVMQGFYQLALDKDVSLLEINPLVLTAENELVALDAKVNIDSNALYRQPGLV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+ED RE +A  H L+YIALDGNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 EMRDISQEDVREAKAADHQLNYIALDGNIGCMVNGAGLAMATMDLIKLNGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++VA AFK+I S S V+ IL+NIFGGI+RCD++  GI+ AV+EV + IP+V+RLE
Sbjct: 291 GGATPERVAEAFKLILSSSDVQSILVNIFGGIVRCDLIADGIIQAVQEVGLTIPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV +G   +A SGL++ITA  L DAA+K+V   
Sbjct: 351 GTNVTLGKEKLANSGLSIITADGLADAAEKVVAVA 385


>gi|170769563|ref|ZP_02904016.1| succinyl-CoA synthetase beta chain [Escherichia albertii TW07627]
 gi|170121620|gb|EDS90551.1| succinyl-CoA synthetase beta chain [Escherichia albertii TW07627]
          Length = 389

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/398 (47%), Positives = 260/398 (65%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAKALL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKALLAGMGMPCPKEIAIQQISQLTEAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    +  + +LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFAQHMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQALRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E  I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEASITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLAVEAVDSLDDAAKRIIALL 388


>gi|195587980|ref|XP_002083739.1| GD13190 [Drosophila simulans]
 gi|194195748|gb|EDX09324.1| GD13190 [Drosophila simulans]
          Length = 416

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 186/397 (46%), Positives = 259/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + ++   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIDKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|326800730|ref|YP_004318549.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sphingobacterium
           sp. 21]
 gi|326551494|gb|ADZ79879.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sphingobacterium
           sp. 21]
          Length = 396

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 183/401 (45%), Positives = 248/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ KA+L+ + V + +G+V  +   A  A K L         VVK+QIHA     
Sbjct: 1   MNIHEYQGKAILKSFGVRIQEGIVADNPEQAVEAAKKLKQDYNSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  ++  V    +EI+G  L+T QTGP G +VN V +       G
Sbjct: 56  -----GGRGKGGGVKLAKNIDEVREKAKEIIGMQLVTPQTGPAGKKVNKVLIAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR+ G    + ST+GGMDIEEVA+  P  I K  IDP IG+      
Sbjct: 111 ASETKEFYMSVLLDRSRGRNIIMYSTEGGMDIEEVAEKTPHLIQKEEIDPSIGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+   D S  EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLSGAAFKDMTKFVAALYKAYEATDSSQFEINPVLKTSDDKILAVDAKVNLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D  ELRD+SEED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHADYAELRDLSEEDPTEVEAGRSNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+ + V A F II  D +VK ILINIFGGI+RCD + +G++ A +E+  
Sbjct: 291 EPANFLDVGGTANAETVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYQEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I +P+++RL+G N +   +LI ESGL V +AI L +AA  +
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLEVFSAIQLKEAADLV 391


>gi|191171938|ref|ZP_03033483.1| succinyl-CoA synthetase beta chain [Escherichia coli F11]
 gi|190907703|gb|EDV67297.1| succinyl-CoA synthetase beta chain [Escherichia coli F11]
 gi|324014859|gb|EGB84078.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           60-1]
          Length = 389

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIYALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVDSLDDAAKRIIALL 388


>gi|225024311|ref|ZP_03713503.1| hypothetical protein EIKCOROL_01186 [Eikenella corrodens ATCC
           23834]
 gi|224942896|gb|EEG24105.1| hypothetical protein EIKCOROL_01186 [Eikenella corrodens ATCC
           23834]
          Length = 388

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 193/396 (48%), Positives = 267/396 (67%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL  Y +PV  G++ ++   A +A   L G   V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLASYGLPVQGGILAANGEEAAAAYDKLGGKFAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV+V  S          ++G  L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKVVKSRDEAKQVAESLIGKNLVTYQTDANGQPVNSVLVCEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR +  V F+AST+GG++IE+VA++ P+KIFK+++DPL+G+       +   L L
Sbjct: 111 LGAVVDRAARRVVFMASTEGGVEIEKVAEETPEKIFKVVVDPLVGLQPCQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +       L    Y+AF + D +L EINPL + ++G L  +D+K+  D NALYR   I
Sbjct: 171 KDKQVGQFVKLMTGAYQAFIENDFALFEINPLSVREDGSLACVDAKVGIDGNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELRD S+E+ RE++A +  L+Y+AL+GNIGCMVNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 231 AELRDKSQENERELKASEFELNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFK+I  D SVKG+LINIFGGI+RCD++ + I++AVKEV + +P+V+RL
Sbjct: 291 GGGATKERVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEVNVTVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL + +A  L+DAA+KIV AV
Sbjct: 351 EGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAV 386


>gi|26250848|ref|NP_756888.1| succinyl-CoA synthetase subunit beta [Escherichia coli CFT073]
 gi|218692340|ref|YP_002400552.1| Succinyl-CoA synthetase subunit beta (SCS-beta) [Escherichia coli
           ED1a]
 gi|227886929|ref|ZP_04004734.1| succinyl-CoA synthetase beta chain [Escherichia coli 83972]
 gi|300992977|ref|ZP_07180132.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|301047014|ref|ZP_07194123.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|26111279|gb|AAN83462.1|AE016770_262 Succinyl-CoA synthetase beta chain [Escherichia coli CFT073]
 gi|218429904|emb|CAR10733.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Escherichia coli
           ED1a]
 gi|227836070|gb|EEJ46536.1| succinyl-CoA synthetase beta chain [Escherichia coli 83972]
 gi|300301059|gb|EFJ57444.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           185-1]
 gi|300406751|gb|EFJ90289.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           45-1]
 gi|307556209|gb|ADN48984.1| succinyl-CoA synthetase subunit beta [Escherichia coli ABU 83972]
 gi|315291543|gb|EFU50903.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli MS
           153-1]
 gi|320193417|gb|EFW68054.1| Succinyl-CoA ligase [ADP-forming] beta chain [Escherichia coli
           WV_060327]
 gi|323190079|gb|EFZ75357.1| succinyl-CoA synthetase beta chain [Escherichia coli RN587/1]
          Length = 389

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SDS VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRIIALL 388


>gi|254584448|ref|XP_002497792.1| ZYRO0F13596p [Zygosaccharomyces rouxii]
 gi|238940685|emb|CAR28859.1| ZYRO0F13596p [Zygosaccharomyces rouxii]
          Length = 427

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 162/398 (40%), Positives = 241/398 (60%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR Y V   +G    +   A    + L     VVK+Q   GGRGKG F 
Sbjct: 25  LSIHEYRSSQLLRDYGVGTPRGEAADNASDALKIAQNLKSDKLVVKAQALTGGRGKGHFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  + G+ + S  +       ++L   LITKQ+G  G  V+ VYV +  +   E YL
Sbjct: 85  ---SGLQSGIHIISKPEQAQDLASQMLKHRLITKQSGEKGKPVSAVYVVECVNAAHESYL 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++  +  I S++GGM+IEEVAK  P  I K  I P  G+T E    +   L   
Sbjct: 142 SILMDRSTKKILIICSSEGGMNIEEVAKSNPDAIKKFYITPSEGITEETARQVGASLGFS 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHL 237
            +A  +  D    LYK + ++D + +EINPL       N ++  +D+K  FDDNA +R  
Sbjct: 202 KEAEAEAADAVTKLYKIYTERDATQIEINPLSEVIGDANHKVMCMDAKFGFDDNASFRQQ 261

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++   RDVS+ED  E+ AKQ +L+++ L GNIGC+VNGAGLAMATMD+IKLYGG PANFL
Sbjct: 262 EVYSWRDVSQEDPDEVLAKQSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFL 321

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GGGA  + +  AF++I S+  V  I +NIFGGI+RCD + +G+++A KE+ +++P++ 
Sbjct: 322 DCGGGATPETIKKAFELILSNKKVDAIFVNIFGGIVRCDYVAEGLVNAAKELGVDVPIIA 381

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL+G N++ G  +I +SG  + +  +LD AA++ V   
Sbjct: 382 RLQGTNLEEGQAIIEKSGFKIFSFEELDPAAERAVALA 419


>gi|205355389|ref|ZP_03222160.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346623|gb|EDZ33255.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 387

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 247/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|93004945|ref|YP_579382.1| succinyl-CoA synthetase subunit beta [Psychrobacter cryohalolentis
           K5]
 gi|122416126|sp|Q1QEK5|SUCC_PSYCK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|92392623|gb|ABE73898.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychrobacter
           cryohalolentis K5]
          Length = 388

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 197/397 (49%), Positives = 273/397 (68%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+ Y +P+ +G++  S   A +A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLKSYGLPIQEGIIAYSGDEAAAAFDKTPTDIAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++  + +       E++G  L+T QT   G  VN V V +    +  ELY
Sbjct: 58  -------GGVKLVKTREEAKQVTDELIGKNLVTYQTDAAGQPVNFVLVAEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KIFK+ IDPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIFKVNIDPLVGLLPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    Y+AF + D+ LLEINPL + +NG +  +D KI  D NALYR   I
Sbjct: 171 EGKQINQFVKLMSGAYQAFVENDIDLLEINPLAVRENGEIVCVDGKIGIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALQDKSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII  DSSV+G+LINIFGGI+RCD++ + I++A+KEV + +P+V+RL
Sbjct: 291 GGGATKDRVVEAFKIILEDSSVEGVLINIFGGIVRCDMIAEAIIAAIKEVDVKVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +++ ESGL +I+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAQILEESGLKLISAQGLSDAAQKIVDAVK 387


>gi|193713938|ref|XP_001946802.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 424

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 172/396 (43%), Positives = 247/396 (62%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E  +K LL ++ V V K  ++ +     + +K+     YV+K+Q+ AGGRGKG F 
Sbjct: 31  LNLLECHSKDLLNQHGVAVQKFKIVENADETNNLLKSFDVDEYVLKAQVLAGGRGKGHF- 89

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V      +   ++ +LG  LITKQT   G  V  V V +  DI RE Y 
Sbjct: 90  --NNGFKGGVHVTKERTKIYDLLKNMLGYKLITKQTPKDGILVTKVMVAESVDIKRETYF 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR+      IAS  GGMDIE++A + P+ I K+ ID   G++      +   L   
Sbjct: 148 CILMDRSQNGPVLIASPAGGMDIEDIAINSPELIKKIPIDIFEGISDTVALDVAKFLNFN 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    L++ F   D   +EINPL+   + ++  +D+KI FDDN+ +RH +I 
Sbjct: 208 EPLASVAANEIKRLWEFFLSVDAVQIEINPLVETLDNKVVCVDAKIQFDDNSQFRHKEIF 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + SE D RE+ A +HNLSYI +DGNIGC+VNGAGLAMATMDIIKL GG PANFLDVG
Sbjct: 268 ELDETSESDPREVMANKHNLSYIGMDGNIGCLVNGAGLAMATMDIIKLRGGEPANFLDVG 327

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  ++++V  AFK++T DSSVK IL+N+FGGI+ C  + KG+++A +++ + +PLV+RLE
Sbjct: 328 GNVNENQVYEAFKLLTLDSSVKAILVNVFGGIVNCATIAKGLINASRKLDLQVPLVVRLE 387

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV  G +L+ ESGL +  A DLD+AA+K + ++K
Sbjct: 388 GTNVSAGKKLLEESGLPIEFASDLDEAAKKAISSLK 423


>gi|261878942|ref|ZP_06005369.1| succinyl-CoA ligase subunit beta [Prevotella bergensis DSM 17361]
 gi|270334452|gb|EFA45238.1| succinyl-CoA ligase subunit beta [Prevotella bergensis DSM 17361]
          Length = 379

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 177/397 (44%), Positives = 241/397 (60%), Gaps = 19/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKA   +Y VPV + VV  +   A  A + L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKAFFAQYGVPVDRSVVCKTPDEAVEAYEKLGVDKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +S   + S    ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGTSAAEIRSRAEAILGMNI-------KGFTVDRVLVGEAVDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S     + S +GGMDIE+VA++ P+KI K++IDPL+G+T          L   
Sbjct: 104 SILVDRKSKCPLMMLSREGGMDIEQVARETPEKIEKIVIDPLVGMTDFLAREAAFRLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF NLY+ F +KD SL EINPL+ +K+G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MAQVKQAVPLFKNLYRLFIEKDASLAEINPLVKLKDGSLKAIDAKMTFDDNALFRHPDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + + E+ +E EAK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTAEERKEHEAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  V  +LINIFGGI RCD + KG+L A K V+ +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVNTVLINIFGGITRCDDVAKGLLEAFKVVETDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G +L+   G        + DA +K V    G
Sbjct: 344 GTNEEEGRKLLE--GTQFHVGTSMADAGRKAVKLSLG 378


>gi|289740029|gb|ADD18762.1| succinyl-CoA synthetase beta subunit [Glossina morsitans morsitans]
          Length = 452

 Score =  431 bits (1108), Expect = e-119,   Method: Composition-based stats.
 Identities = 177/398 (44%), Positives = 240/398 (60%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL    +P  K  V +S   A+     L     V+K+Q+ AGGRG G FK
Sbjct: 39  LNVQEHVSYKLLNDAGIPTPKFGVATSGSEAKDIATGLKTNNLVLKAQVLAGGRGVGHFK 98

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVR+  + +   +   +++   L+TKQTGP G     V V +     RE Y+
Sbjct: 99  N---GLKGGVRIVHTPEEAETLAGKMVNQLLVTKQTGPAGRICKKVMVAERKFPRREFYV 155

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P+ I    ID   G+T E    +   + + 
Sbjct: 156 AVMMERAFNGPVIIASSQGGVNIEEVAAENPEAIIYEPIDIKQGLTKEQAKKVAQAIGVG 215

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L  N+YK F  KD  L+EINP           LD+K  FDD+A YR  ++ 
Sbjct: 216 AAHEEKTIQLLENMYKLFVQKDALLIEINPYAEDAMDGFFALDAKFRFDDSAEYRQKELF 275

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA + +L++IALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 276 ALRDWTQEDPKEVEAAKFDLNFIALDGTIGCMVNGAGLAMATMDIIKLYGGDPANFLDVG 335

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSD  V  IL+NIFGGIMRCDV+ +GI++A KE+ + +P+V+RL+
Sbjct: 336 GGATAQAVKEAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIIAAAKELNMQMPIVVRLQ 395

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+    LI +SGL +I   DLD+AA   VH  K V
Sbjct: 396 GTNVNEARELIRKSGLRIIPRHDLDEAANLAVHLAKIV 433


>gi|71064686|ref|YP_263413.1| succinyl-CoA synthetase subunit beta [Psychrobacter arcticus 273-4]
 gi|123649831|sp|Q4FVH9|SUCC_PSYA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|71037671|gb|AAZ17979.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Psychrobacter
           arcticus 273-4]
          Length = 388

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 200/397 (50%), Positives = 276/397 (69%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+ Y +P+ +G++  S   A +A    P  + V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLKSYGLPIQEGLIAYSGDEAAAAFDKTPTDIAVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV-EDGADILRELY 119
                  GGV++  + +       E++G+ L+T QT   G  VN V V ED   +  ELY
Sbjct: 58  -------GGVKLVKTREEAKQVTDELIGTNLVTYQTDAAGQPVNFVLVAEDMYPVQTELY 110

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L  +VDR+S  V F+AST+GG++IE+VA++ P+KIFK+ IDPL+G+       +   L L
Sbjct: 111 LGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIFKVSIDPLVGLLPFQAREVAFKLGL 170

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G+       L    Y+AF + D+ LLEINPL + +NG +  +D KIS D NALYR   I
Sbjct: 171 EGKQISQFVKLMTGAYQAFVENDIDLLEINPLAVRENGEIVCVDGKISIDSNALYRLPKI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L+D S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 231 AALQDKSQENERELKAAEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGKPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +D+V  AFKII  DSSV+G+LINIFGGI+RCD++ + I++A+KEV + +P+V+RL
Sbjct: 291 GGGATKDRVVEAFKIILEDSSVEGVLINIFGGIVRCDMIAEAIIAAIKEVDVKVPVVVRL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           EG N ++G +++ ESGL +I+A  L DAAQKIV AVK
Sbjct: 351 EGNNAELGAKILEESGLKLISAQGLSDAAQKIVDAVK 387


>gi|195377210|ref|XP_002047385.1| GJ11957 [Drosophila virilis]
 gi|194154543|gb|EDW69727.1| GJ11957 [Drosophila virilis]
          Length = 415

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 186/396 (46%), Positives = 253/396 (63%), Gaps = 4/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +      A+++     YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKDDTQAVQSFDCDEYVVKAQILAGGRGKGIFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSNKSDVLSLSKQMIGNRLITKQTPKSGILVNKVMVARSVNITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA + P+KI  + +     +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAAETPEKIKTVPLSINKPIPEAVLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D   +EINPL    NG +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDTVQRCADEIQKLYTLFKAVDAVQIEINPLAETDNGEVISVDAKLNFDDNAEFRQKDIF 259

Query: 241 ELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            L    E+ D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLDV
Sbjct: 260 ALDTHEEDADPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDV 319

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGG  +D+VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+RL
Sbjct: 320 GGGVQEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV     ++  SGL + TA DLDDAAQK V A+
Sbjct: 380 EGTNVTKAREILKNSGLPIQTASDLDDAAQKAVAAL 415


>gi|301065049|ref|ZP_07205394.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
 gi|300440898|gb|EFK05318.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
          Length = 393

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 184/399 (46%), Positives = 253/399 (63%), Gaps = 12/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  K+ +PV  G V +    A    + + GP +VVK+Q+HAGGRGKG   
Sbjct: 1   MKIHEYQAKEIFGKWGIPVPNGRVATDPDEAGKVCEMINGPPWVVKAQVHAGGRGKGGGV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  +            +V+S  + +LGS+L+T QTGP G +VN V +E+G DI RE YL
Sbjct: 61  KVVMEK----------DAVVSTAKSLLGSSLVTPQTGPEGVKVNQVLIEEGVDIDREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
            ++VDR + M A I S  GGM IEEVA   P+ I+   +DP  G       +L   L+  
Sbjct: 111 GMVVDRAAAMPAMIFSPAGGMSIEEVAAQTPELIWTECVDPATGWMPYQARNLAYRLDPL 170

Query: 180 -QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              +   +  ++  NLYK F   D SL+EINPLII K G++  LD+K++ DDNAL+R  +
Sbjct: 171 PSTETLRELINVMANLYKVFMSLDCSLVEINPLIITKAGKVLALDAKLNIDDNALFRQKE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I +L D S  D  E+ A  +NL+YI LDGNIG MVNGAGLAMATMD+IK  G  PANFLD
Sbjct: 231 IVKLEDTSGTDPLELTAAAYNLNYIRLDGNIGAMVNGAGLAMATMDLIKGAGAEPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA ++ +   F+II  D  V+ IL+NIFGGI+RCDVL +G+++A ++ +I +PL++R
Sbjct: 291 VGGGATEEMITKGFEIILGDDRVRAILVNIFGGILRCDVLARGVVAAAQKSRIQVPLIVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           LEG NVD G +++  SGL  + A DL +AA  +   V G
Sbjct: 351 LEGTNVDEGRKILEGSGLKFLVAKDLSEAAGLVAAQVSG 389


>gi|215489395|ref|YP_002331826.1| predicted succinyl-CoA synthetase, beta subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312965653|ref|ZP_07779882.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
 gi|215267467|emb|CAS11921.1| predicted succinyl-CoA synthetase, beta subunit [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312289627|gb|EFR17518.1| succinyl-CoA synthetase beta chain [Escherichia coli 2362-75]
          Length = 389

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 186/398 (46%), Positives = 262/398 (65%), Gaps = 13/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V   L    + ++++LGS L+T QTGP G  V+ + + +    + +E
Sbjct: 60  ---------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S +GG++IE+VA + P+KI  + IDPL GV    +  +  +L
Sbjct: 111 LYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L+         L    +KAF + D +LLEINPL++ + G     D+K+S DDNALYRH 
Sbjct: 171 QLEHGLFAAFSRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y++LDGNIGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQVLRDETQEDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SD  VK IL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDGKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL G N   G RL+AESGL V     LDDAA++I+  +
Sbjct: 351 RLSGNNAAEGQRLLAESGLTVEAVNSLDDAAKRIIALL 388


>gi|195337663|ref|XP_002035448.1| GM13912 [Drosophila sechellia]
 gi|194128541|gb|EDW50584.1| GM13912 [Drosophila sechellia]
          Length = 416

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 185/397 (46%), Positives = 258/397 (64%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L+KY V + +  V+ +  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDILQKYGVAIQQFKVLDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + ++   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPDKIKTVPLDIDKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTATDLDDAAHKAVAAL 415


>gi|121612371|ref|YP_001000233.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005189|ref|ZP_02270947.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|189046905|sp|A1VYP2|SUCC_CAMJJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|87250129|gb|EAQ73087.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 387

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 248/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+    ++P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNSIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASAETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|283954179|ref|ZP_06371704.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794458|gb|EFC33202.1| succinyl-CoA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 387

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 248/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  S+  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSIDEAVANAKELGGSIWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V +   +ILG  LIT QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKAYATQILGMNLITHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMLAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREATEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKVILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|21356231|ref|NP_651963.1| sucb, isoform A [Drosophila melanogaster]
 gi|6634118|emb|CAB64384.1| putative succinyl-coa ligase (GDP-forming) beta-chain precursor
           [Drosophila melanogaster]
 gi|7295455|gb|AAF50771.1| sucb, isoform A [Drosophila melanogaster]
 gi|15292271|gb|AAK93404.1| LD44970p [Drosophila melanogaster]
 gi|220946348|gb|ACL85717.1| Sucb-PA [synthetic construct]
 gi|220956042|gb|ACL90564.1| Sucb-PA [synthetic construct]
          Length = 416

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 186/397 (46%), Positives = 260/397 (65%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+++  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + ++   V+S  ++++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 140 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +     +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 SM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++++N+PLV+R
Sbjct: 319 VGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|118474689|ref|YP_892081.1| succinyl-CoA synthetase beta chain [Campylobacter fetus subsp.
           fetus 82-40]
 gi|189046901|sp|A0RPE8|SUCC_CAMFF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118413915|gb|ABK82335.1| succinyl-CoA synthetase beta chain [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 385

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 181/396 (45%), Positives = 244/396 (61%), Gaps = 14/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK LLR + + VA G+++ SV  A +A K L G ++ VK+QIHA         
Sbjct: 1   MNIHEFQAKELLRDFGINVADGIMVVSVDDALNAAKKLGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V     +ILG TL+TKQTGP G  V  +Y+E G +I +E YL
Sbjct: 52  -GGRGLGGGVKIAKSLDEVKEYASKILGMTLVTKQTGPEGKLVKKLYIEKGTNIDKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL  DR +  +A IAS  GGM+IEEV      KI  + IDP IG+      ++ D L L 
Sbjct: 111 SLTFDRINECIAVIASADGGMNIEEVDH---DKIITIRIDPQIGLRDFHSLAIADFLNLD 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +    L   LY+ +   D +L+EINPL++ K   L  LD+K+ FDD+AL+R   I 
Sbjct: 168 KDLSVKLHVLLSKLYRLYWQTDSNLVEINPLVLTKENDLIPLDAKMGFDDSALFRQEKIA 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EE+  E+EAK + LSY+ LDGNIGCMVNGAGLAM TMD I   GG PANFLDVG
Sbjct: 228 NMRDIDEEEPSELEAKTYGLSYVKLDGNIGCMVNGAGLAMGTMDTINGVGGKPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+   VA AF+II  D +VK I +NIFGGI+RCD +  GIL A K  K+ +P+++RL+
Sbjct: 288 GGANPQTVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIANGILEATKLTKVEVPVIVRLD 347

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++ ++ + N+I+A DL+  A+  V   
Sbjct: 348 GTNAKEAAEILKQANITNIISAPDLESGAKMSVELA 383


>gi|317484137|ref|ZP_07943067.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
 gi|316924641|gb|EFV45797.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
          Length = 394

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 183/395 (46%), Positives = 245/395 (62%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK LL  Y VP  +G + ++   AE A + LPGP++VVK+QIHAGGRGK    
Sbjct: 1   MHIHEYQAKRLLSAYGVPTPEGRLAATPGEAEQAARDLPGPVWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S +        +LG+ L+T QTGP G RVN V++E G    RE YL
Sbjct: 58  -------GGVKVCRSPEEAREAAASLLGARLVTPQTGPDGERVNAVWIERGTASARECYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR S  +  +AS  GGMDIE VA   P+++F   +D    +      +L +   L+
Sbjct: 111 AVALDRASQCLTVMASPGGGMDIEAVAASSPERVFTARLDGGHYLWPFQARNLLEGWGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   L   L     +KDM+ LEINPL + + G    LD+K++FDD+AL RH DI 
Sbjct: 171 SGPARELASLVRRLAALATEKDMTQLEINPLALSEGGGFVALDAKMNFDDSALKRHPDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  E D  E  A +  L+Y+ L G+IG +VNGAGLAMATMD IK  G  PANFLD G
Sbjct: 231 ALRDREEGDPLERAAAEKGLTYVRLGGSIGTLVNGAGLAMATMDAIKQAGAEPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ VAA F I+ SD  V+GILINIFGGI+RCD++  GI++A +++ I +PLV+RLE
Sbjct: 291 GGASEETVAAGFSIMLSDPHVRGILINIFGGILRCDIVAHGIVNAARKLDIAVPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV  G R++ ESGL   TA  + +AA+ IV   
Sbjct: 351 GTNVAEGRRILRESGLRFHTASSMSEAARLIVGLA 385


>gi|198454181|ref|XP_002137808.1| GA26331 [Drosophila pseudoobscura pseudoobscura]
 gi|198132687|gb|EDY68366.1| GA26331 [Drosophila pseudoobscura pseudoobscura]
          Length = 451

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 240/398 (60%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESGIPTPRFAVAKNGKEASDIANKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    K+      +++   LITKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPKTAEDISSKMIDQLLITKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID   G+T E    + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKENPDAIIYEPIDIARGLTEEQACKIVEKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   +  NLY+ F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGADEHIKMLLNLYQLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATADAVKAAFKIITSDRKVLCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRASGLKILARDDLDKAADLAVHLAQIV 432


>gi|260591649|ref|ZP_05857107.1| succinyl-CoA ligase [ADP-forming] subunit beta [Prevotella
           veroralis F0319]
 gi|260536449|gb|EEX19066.1| succinyl-CoA ligase [ADP-forming] subunit beta [Prevotella
           veroralis F0319]
          Length = 379

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 173/396 (43%), Positives = 240/396 (60%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK++   Y +PV + +V  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKSIFASYGLPVDRNIVCRTPDEAVAAYKQLGLAKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ + +      ILG  +        G  V+ V V +  +I  E Y+
Sbjct: 58  -------GGVKLGSNEEEIRQHAEAILGMDI-------KGFTVDRVLVSEAVNIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP IG++          L   
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPTIGMSDFLAREAAFKLFDN 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F NLYK F +KD SL EINPL++ + G L+ +D+K++FDDNAL+RH DI 
Sbjct: 164 MAQVKQAVPIFKNLYKLFVEKDASLAEINPLVMTQEGTLKAIDAKMTFDDNALFRHPDIA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + + E+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTAEEKKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ +D  VK +LINIFGGI RCD + KG+L A K ++ +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLADKHVKVVLINIFGGITRCDDVAKGLLEAFKVIQTDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++  +  NV  A  + DA  K V   K
Sbjct: 344 GTNEAEGRAILEGTHFNV--ATSMADAGHKAVELSK 377


>gi|315638488|ref|ZP_07893665.1| succinyl-CoA synthase [Campylobacter upsaliensis JV21]
 gi|315481479|gb|EFU72106.1| succinyl-CoA synthase [Campylobacter upsaliensis JV21]
          Length = 387

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 188/396 (47%), Positives = 247/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+  +  V   KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFAENGVATLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V S   +ILG TL+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKSLDEVKSYAEQILGMTLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKLFHALEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD++LYRH DI 
Sbjct: 171 KDEGKKLAAMIEKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSSLYRHSDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ALRDITEENDAEREAGEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++N+P+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNVPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A  L + A+ +   V
Sbjct: 351 GTNAAEAKSILDNSNLKNIKAATSLKEGAELVKSLV 386


>gi|114778147|ref|ZP_01453034.1| ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain
           [Mariprofundus ferrooxydans PV-1]
 gi|114551565|gb|EAU54119.1| ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain
           [Mariprofundus ferrooxydans PV-1]
          Length = 388

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 194/386 (50%), Positives = 256/386 (66%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+L+++ +    G++ ++V  A +A   L G ++VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQAKAVLKRFGISTPSGILANTVAEAVAAAHDLGGDIWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  S++ V      +LG+TL+T QTG  G +V+ +Y+E G DI  E YL
Sbjct: 58  -------GGVRLCRSIEEVEQSASALLGATLVTHQTGSEGKQVHKIYIEQGVDIAHEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR +  VAF+ S  GGMDIE+VA   P++I    +D   G+   D A++ D L L 
Sbjct: 111 SLLVDREAEAVAFVVSPAGGMDIEQVAATAPEQIHSRAVDAGTGLVDADYAAMIDGLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A      L   LY+AF + D SLLE+NPLI    G L  LD+K++ DDNALYR  D+ 
Sbjct: 171 GRAAKAFPVLADALYRAFTESDCSLLELNPLIETGAGELIALDAKMAIDDNALYRQPDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED RE EA Q  L+YIALDG IGCMVNGAGLAM TMDII+L G  PANFLDVG
Sbjct: 231 ALRDTDEEDPRETEAVQFGLNYIALDGRIGCMVNGAGLAMGTMDIIQLKGDRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   D V  AFK++ SD  VK +L+NIFGGI+RCD++  G+L A+K   + +P++MRL 
Sbjct: 291 GGVTVDAVCEAFKLLFSDRHVKAVLVNIFGGIVRCDLISLGLLEAIKTHPMRVPVIMRLV 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N ++G ++I ++GL+V  A DLD 
Sbjct: 351 GTNEELGKQIIRDAGLDVRWATDLDQ 376


>gi|57242653|ref|ZP_00370590.1| succinyl-CoA synthase, beta subunit [Campylobacter upsaliensis
           RM3195]
 gi|57016582|gb|EAL53366.1| succinyl-CoA synthase, beta subunit [Campylobacter upsaliensis
           RM3195]
          Length = 387

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 246/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+  +  V   KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFAENGVATLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +   +ILG TL+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKSLDEVKNYAEQILGMTLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK  P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKQSPEKIAKVGIDPQIGFKLFHALEVAKVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD++LYRH DI 
Sbjct: 171 KDESKKLAVMIEKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSSLYRHSDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ALRDITEENDAEREAGEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++N+P+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNVPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A  L + A+ +   V
Sbjct: 351 GTNAAEAKSILDNSNLKNIKAATSLKEGAELVKSLV 386


>gi|148284072|ref|YP_001248162.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Boryong]
 gi|189081762|sp|A5CC52|SUCC_ORITB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146739511|emb|CAM79217.1| succinyl-CoA synthetase beta chain [Orientia tsutsugamushi str.
           Boryong]
          Length = 386

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 186/395 (47%), Positives = 257/395 (65%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +L KYNVP+  G+ I      + AI +L    +V+K+QIHA         
Sbjct: 1   MNIHEYQAKEILSKYNVPIQPGIAILKYEDIDYAIDSLATDTFVIKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +      +  + + G  L+T QTGP G +V  +Y+E  A I  ELYL
Sbjct: 52  -GGRKIGGGIKISNDKNEAKNLAKNMWGMNLVTPQTGPKGQKVQRIYIESAAKIKLELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR++  + F+AS+ GG++IEEVA   P KI K+ I+ L G+       +   L L 
Sbjct: 111 GAVIDRSNHCITFMASSAGGINIEEVAHTNPDKIIKVKINILTGIQPFHSRKIIFQLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y    + D + +EINPLII  + +L  LD+KI+FDD+AL+R   IQ
Sbjct: 171 GDLAKQMAKIMSAVYSMLINTDATQVEINPLIITLDDKLIALDAKINFDDSALFRQPLIQ 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  EED  E+ A + +LSY+ ++GNIGCMVNGAGLAMATMDIIKLYG  PANFLDVG
Sbjct: 231 GMRDEDEEDHLELRATKADLSYVRMNGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD+ +VA A KII+SD +VKGILINIFGGIMRCD++ +G+L+A KE+ ++IPLV+RL 
Sbjct: 291 GSADKKRVAEALKIISSDQNVKGILINIFGGIMRCDIIAEGVLAAAKEINLSIPLVVRLA 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G  +++ S L ++ A DLDDAA+KIV AV
Sbjct: 351 GTNFELGKEILSNSKLQIVAANDLDDAARKIVEAV 385


>gi|269925410|ref|YP_003322033.1| succinyl-CoA synthetase, beta subunit [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789070|gb|ACZ41211.1| succinyl-CoA synthetase, beta subunit [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 382

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 167/395 (42%), Positives = 250/395 (63%), Gaps = 20/395 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ++ +L K+ +P+  G++  SV  A  A  +L  P+ V+K+Q+H+GGRGK    
Sbjct: 1   MNLHEYQSREILAKHGIPIPPGILARSVEEAVEAASSLGYPV-VIKAQVHSGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S + +      IL   +        G  V+ + V   ADI +E YL
Sbjct: 57  -------GGIKLVNSQRELEYVAPTILSMNIG-------GRPVSALLVVPAADIQKEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS +GG+DIEEVA+++P  I ++   P +G+       L   +  +
Sbjct: 103 SVVLDRELKTFTLIASAEGGVDIEEVAREHPDSILRVPAHPWLGLQPYQARELAYKVGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++  +LY+   D + SL+EINPL  + +G L  LDSKI  DDN+L+RH DI 
Sbjct: 163 GSLVRTFVEIAMSLYRCALDVEASLVEINPLAKVSSGDLIALDSKIVVDDNSLFRHPDIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD+S+E++ E+EA +  +SYI LDGNIGCMVNGAGLAMATMD++KLYGG+PANFLD+G
Sbjct: 223 EMRDLSQEETAEVEASRVGISYIKLDGNIGCMVNGAGLAMATMDLVKLYGGSPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V AA  II SD  V  +LINIFGGI RCD + +GI+  ++ +K  +P+V+RL 
Sbjct: 283 GGAHADQVEAAMNIILSDEKVSAVLINIFGGITRCDDVARGIVEGLRNIKRGVPIVVRLV 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G+R++ ++GL  ++   L++AA+  V   
Sbjct: 343 GTNEEEGHRILEDAGLRSLS--SLEEAAKLAVELA 375


>gi|124004848|ref|ZP_01689691.1| succinyl-CoA synthetase beta chain [Microscilla marina ATCC 23134]
 gi|123989526|gb|EAY29072.1| succinyl-CoA synthetase beta chain [Microscilla marina ATCC 23134]
          Length = 396

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 187/403 (46%), Positives = 258/403 (64%), Gaps = 20/403 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K++LRKY V    G VI ++  A+  IK +         VVK+QIHA     
Sbjct: 1   MNIHEYQGKSILRKYGVATPAGHVIENLSQAKDIIKKVQSESGSEKVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA---- 112
                      GGV++  +L+  +     ILG  L+T QTG  G +V+ + VE+      
Sbjct: 56  -----GGRGKGGGVKLADNLEQALEYADNILGMQLVTPQTGDEGKKVHKLLVEENVYYPG 110

Query: 113 -DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +  +E Y+ +L+DR +  +  +AST+GGMDIEEVA+  P+KI K  IDP +G+ +    
Sbjct: 111 EEEPKEFYMGILLDRNTSKIVIMASTEGGMDIEEVAEKTPEKIVKEWIDPRVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G++  +G      LYKA+ D D +++EINP++   + R+   D KI  DDN
Sbjct: 171 KVAFALGLKGKSLKEGVKFIYALYKAYTDSDATMVEINPMLKTSDSRILAADCKIDLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ E+RDV+EED  E+EAK+ +L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALYRHADLAEMRDVTEEDPFEVEAKESDLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGGGA+   V A F+II  D +VK ILINIFGGI+RCD + KG++ A K +  
Sbjct: 291 EPANFLDVGGGANPKTVEAGFRIILKDPNVKAILINIFGGIVRCDRVAKGVVEAYKNIGD 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           I +P+++RL+G N + G ++I ESGL V +AI L DAA K+  
Sbjct: 351 IPVPIIVRLQGTNAEEGAKIIDESGLKVTSAIVLKDAADKVKE 393


>gi|284925796|gb|ADC28148.1| succinyl-coA synthetase beta chain [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 387

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 247/396 (62%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +P  KG V  SV  A +  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYTSKILGINLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P+KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|295133500|ref|YP_003584176.1| succinyl-CoA synthetase beta chain [Zunongwangia profunda SM-A87]
 gi|294981515|gb|ADF51980.1| succinyl-CoA synthetase beta chain [Zunongwangia profunda SM-A87]
          Length = 397

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 175/406 (43%), Positives = 243/406 (59%), Gaps = 22/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  + V   +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNIHEYQGKEILGSFGVRTQRGIVAQTAEEAVKAAKELTEQTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V     EI+G  L+T QT   G +V+ VYV +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVEQIAGEIIGMNLVTPQTSAEGKKVHQVYVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPHLIFTEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LY AF   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGTAFKEMTKFVTSLYTAFDKSDSSLFEINPVLKTSDDKILAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D  E+RD  EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAEMRDKREENPTEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF++I  D  V+ IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRLILKDEKVEAILVNIFGGIVRCDRVAQGIVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N D+  +LI ESGL V +A+   +AA K V AV
Sbjct: 351 AIKVPIIVRLQGTNADVAKKLIDESGLAVSSAVQFKEAADK-VQAV 395


>gi|24645208|ref|NP_649846.2| skpA associated protein, isoform A [Drosophila melanogaster]
 gi|161078106|ref|NP_001097713.1| skpA associated protein, isoform B [Drosophila melanogaster]
 gi|23170752|gb|AAF54308.2| skpA associated protein, isoform A [Drosophila melanogaster]
 gi|158030193|gb|ABW08624.1| skpA associated protein, isoform B [Drosophila melanogaster]
          Length = 502

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 237/398 (59%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 432


>gi|221122230|ref|XP_002167210.1| PREDICTED: similar to MGC132166 protein [Hydra magnipapillata]
          Length = 425

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 239/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           +N+ EY +K LL  Y + + K  V ++   A    ++L        V+K+QI AGGRGKG
Sbjct: 31  LNLQEYASKKLLAHYGINIQKFDVATTPKEAAKIGRSLMADTADELVIKAQILAGGRGKG 90

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F+      KGGV++   + +V     ++LG  L TKQT P G  V  + V +   I RE
Sbjct: 91  VFEN---GFKGGVKLTKDVNTVEDIASKMLGFRLTTKQTPPNGVLVKKLMVCESLTITRE 147

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+++L+DR +     +AS +GG+DIEEVA+  P KI K  ID   GVT E    +   L
Sbjct: 148 TYIAILMDREANGSVIVASPEGGVDIEEVAEKNPSKILKENIDIEKGVTLEQADRISTFL 207

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             QG+           LY  F   D   +EINP        +   D+KI+FDDNA +R  
Sbjct: 208 NFQGKKHTQASLQIRRLYNLFNGVDAVQVEINPFGETDKDEVVCFDAKINFDDNAKFRQK 267

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I E+ D SE D RE+EA ++NL+YI LDGNI CMVNGAGLAMATMDIIKL GG PANFL
Sbjct: 268 AIFEMDDHSEADPRELEADKYNLNYIPLDGNIACMVNGAGLAMATMDIIKLNGGWPANFL 327

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  ++ V   FK++TSD  V+ IL+NIFGGI+ C V+ +GI  A + + +++P+V+
Sbjct: 328 DLGGGVTENGVYHGFKLLTSDPQVRCILVNIFGGIVDCAVIARGITKAYQSMNLSVPVVV 387

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RLEG NVD   R++ ES + + TA +LDDAA+K V 
Sbjct: 388 RLEGTNVDEAKRILTESQMPIKTAENLDDAAKKAVA 423


>gi|195126843|ref|XP_002007878.1| GI13181 [Drosophila mojavensis]
 gi|193919487|gb|EDW18354.1| GI13181 [Drosophila mojavensis]
          Length = 420

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 183/397 (46%), Positives = 258/397 (64%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +       + +   P YVVK+QI AGGRGKG F 
Sbjct: 28  LNLLEFQSKDLLQKYGVAIQQFKVLDNSSTDTQVVNSFDCPEYVVKAQILAGGRGKGIFD 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V++  ++++G+ LITKQT  TG  VN V V    +I RE Y+
Sbjct: 88  N---GFKGGVHITSNKNDVLALSKKMIGNRLITKQTPKTGILVNKVMVARSVNITRETYV 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+K+  + +D    +  + +  +   LE +
Sbjct: 145 CILLDREHNGPVLIASPAGGMDIEAVAEETPEKLLTVPLDIDKPIPEDKLIQVAKFLEFK 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A     D    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  +I 
Sbjct: 205 GDAIKRCADEIQKLYTLFKSVDAVQIEINPLAETDTGEVISVDAKLNFDDNAQFRQKEIF 264

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 265 AM-DVTEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG ++ +VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+R
Sbjct: 324 VGGGVNEQQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V ++
Sbjct: 384 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVASL 420


>gi|221120051|ref|XP_002157521.1| PREDICTED: similar to succinate-CoA ligase, GDP-forming, beta
           subunit, partial [Hydra magnipapillata]
          Length = 406

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 175/396 (44%), Positives = 239/396 (60%), Gaps = 6/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           +N+ EY +K LL  Y + + K  V ++   A    ++L        V+K+QI AGGRGKG
Sbjct: 12  LNLQEYASKKLLAHYGINIQKFDVATTPKEAAKIGRSLMADTADELVIKAQILAGGRGKG 71

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            F+      KGGV++   + +V     ++LG  L TKQT P G  V  + V +   I RE
Sbjct: 72  VFEN---GFKGGVKLTKDVNTVEDIASKMLGFRLTTKQTPPNGVLVKKLMVCESLTITRE 128

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y+++L+DR +     +AS +GG+DIEEVA+  P KI K  ID   GVT E    +   L
Sbjct: 129 TYIAILMDREANGPVIVASPEGGVDIEEVAEKNPSKILKENIDIEKGVTLEQADRISTFL 188

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
             QG+           LY  F   D   +EINP        +   D+KI+FDDNA +R  
Sbjct: 189 NFQGKKHTQASLQIRRLYNLFNGVDAVQVEINPFGETDKDEVVCFDAKINFDDNAKFRQK 248

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I E+ D SE D RE+EA ++NL+YI LDGNI CMVNGAGLAMATMDIIKL GG PANFL
Sbjct: 249 AIFEMDDHSEADPRELEADKYNLNYIPLDGNIACMVNGAGLAMATMDIIKLNGGWPANFL 308

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG  ++ V   FK++TSD  V+ IL+NIFGGI+ C V+ +GI  A + + +++P+V+
Sbjct: 309 DLGGGVTENGVYHGFKLLTSDPKVRCILVNIFGGIVDCAVIARGITKAYQSMNLSVPVVV 368

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RLEG NVD   R++ ES + + TA +LDDAA+K V 
Sbjct: 369 RLEGTNVDEAKRILTESQMPIKTAENLDDAAKKAVA 404


>gi|195054872|ref|XP_001994347.1| GH23962 [Drosophila grimshawi]
 gi|193896217|gb|EDV95083.1| GH23962 [Drosophila grimshawi]
          Length = 451

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL + N+P  +  V  +   A    + L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESNIPTPRFAVAKNGKEAHDIAQNLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV     S      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVFDADSAEQYSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID + G+T E    + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKENPDAILYEPIDIVEGLTKEQACRMIEKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  ++  NLYK F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GAGADEHIEMLMNLYKLFVKKDALLVEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 CMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDKKVMCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRSSGLKILARDDLDKAADMAVHLAQIV 432


>gi|195499264|ref|XP_002096876.1| GE25915 [Drosophila yakuba]
 gi|194182977|gb|EDW96588.1| GE25915 [Drosophila yakuba]
          Length = 503

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 237/398 (59%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 432


>gi|154422173|ref|XP_001584099.1| adhesin protein AP51-3 [Trichomonas vaginalis G3]
 gi|121918344|gb|EAY23113.1| adhesin protein AP51-3, putative [Trichomonas vaginalis G3]
          Length = 409

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 252/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  K+NV     VV  +   A +A K +  P  V+K+Q++ GGRGKG +KE
Sbjct: 13  NILEWQSKEICAKFNVAAGINVVARTPEEAAAAFKKIGLPAAVIKAQVYCGGRGKGHWKE 72

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 73  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFA 130

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L G
Sbjct: 131 ILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKIHKFVLDGVQGITEEVAQTISKKLGLTG 190

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 191 KAYENGVEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 250

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+GG
Sbjct: 251 YRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLGG 310

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A +  V   F II+S S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 311 AASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLEG 370

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NVD G +L+ ESGL +I A +L DA  K V A  G
Sbjct: 371 TNVDAGKKLLRESGLPIIPADNLTDAGIKAVKAANG 406


>gi|268534598|ref|XP_002632430.1| Hypothetical protein CBG00458 [Caenorhabditis briggsae]
 gi|187039142|emb|CAP21906.1| hypothetical protein CBG_00458 [Caenorhabditis briggsae AF16]
          Length = 415

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 177/395 (44%), Positives = 250/395 (63%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V K VV ++   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQKFVVAANRKEAEEKWMSFGNHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +      GGV +    K  +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  DGTKG-IGGVYITKEKKEALDAIDEMIGKRLVTKQTTEDGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P +IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQMGMTEAQSLKIAKELQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  DI 
Sbjct: 199 GKLLGAAATEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKDIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G+++AV ++ + +P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKQIMKKSGLKILTANNLDEAAAKAVESL 413


>gi|261332823|emb|CBH15818.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Trypanosoma
           brucei gambiense DAL972]
          Length = 507

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 177/391 (45%), Positives = 257/391 (65%), Gaps = 8/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+KALL++       GV  SS+   E+A+  + G   VVKSQI AGGRG G F 
Sbjct: 110 LNIHEYQSKALLKEGGCKTEFGVACSSIEEVEAALGKIKGDKKVVKSQILAGGRGMGTFV 169

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
           +     KGGV V       ++  R +L +TL+TKQTGP G +V+ +YV +    I RELY
Sbjct: 170 D---GFKGGVHVCKDAAEALACARRMLNNTLVTKQTGPKGQKVSRLYVTEAISGIKRELY 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +    FI S +GGM IEE+A+  P KI K+ I+   G+  ++  +    L  
Sbjct: 227 LALLLDRKTASPVFIGSAEGGMGIEELAQKQPDKIKKMRINVQEGINHDNCLTFAHELGF 286

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A  +  +    LY     KD +++EINPL+ ++NG +  +D+K+SFDDNA +R  DI
Sbjct: 287 TGRAAENAAEQIKALYNVGKSKDCTMVEINPLVELENGDVMCIDAKLSFDDNAEFRQHDI 346

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I   GG PANFLDV
Sbjct: 347 FALADATQIDPKEVVAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISHGGGKPANFLDV 406

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN----IPL 355
           GG A ++++ AAF+IIT D +V+ IL+NIFGGIMRCD + +GI++A + +K      +P+
Sbjct: 407 GGSATKEQIVAAFEIITGDEAVRSILVNIFGGIMRCDTIAEGIVAASRMLKSKGVREVPV 466

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           V+RL G+  + G R++ ESGL +  A + ++
Sbjct: 467 VVRLSGSKEEEGKRILKESGLPLHPAQNFEE 497


>gi|303280569|ref|XP_003059577.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459413|gb|EEH56709.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 424

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 181/390 (46%), Positives = 253/390 (64%), Gaps = 9/390 (2%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGK 56
           +NIHEYQA+   L+ +Y V V  G+  ++     +A   L G     VVKSQ+ AGGRG 
Sbjct: 30  LNIHEYQARSAELMAQYGVRVPPGIACTTPDEVAAAAAKLSGESGEVVVKSQVLAGGRGL 89

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F    +  KGGV +        +   ++LG TL+TKQTG  G  VN + V +   ++ 
Sbjct: 90  GTF---TSGLKGGVHIVP-AAEAKTLSEKMLGQTLVTKQTGAAGKPVNTLMVAEKMKLVN 145

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y ++L+DR S     IA ++GG  IE++A+ +P+KI K+ +D   G+T++    L   
Sbjct: 146 EMYFAILLDRASAGPMIIACSEGGTSIEDLAESHPEKIIKMKVDVNRGLTTDQALELARG 205

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L++ G A  D       LY  F   D ++LE+NPL       L   D+K++FDDNA YR 
Sbjct: 206 LKVSGSA-DDAAAQLKALYAVFEKSDCTMLEVNPLAETDEKLLIAADAKLNFDDNAEYRQ 264

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++  LRD S+ED RE+ A + +L+YI LDGNIGCMVNGAGLAMATMDII L+G +PANF
Sbjct: 265 RELFALRDHSQEDPREVAAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIISLHGASPANF 324

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A +++V  AFKI+T+D  VK +L+NIFGGIM+CDV+  GI++A K+V I +PLV
Sbjct: 325 LDVGGNASEEQVVEAFKILTADVKVKALLVNIFGGIMKCDVIASGIVNAAKQVGIKVPLV 384

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +RLEG NV+ G  ++AESGLN+++A DLDD
Sbjct: 385 VRLEGTNVEAGKEILAESGLNIVSADDLDD 414


>gi|324516298|gb|ADY46487.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Ascaris suum]
          Length = 436

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 172/394 (43%), Positives = 236/394 (59%), Gaps = 4/394 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    LL K  + V    V ++      A K + G  YVVK+QI AGGRGKG F   
Sbjct: 27  LHEHHGMDLLSKEQIRVPPYGVATTGDEVFEAAKKIGGKDYVVKAQILAGGRGKGYFD-- 84

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +  +GGV+V  +          +LG+ LITKQT   G+    V V       RE Y S+
Sbjct: 85  -SGLQGGVQVVYTPDEAREKASLMLGAHLITKQTTHRGNLCERVMVCKRLFTRREYYFSI 143

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +DR       +AS+ GG++IEEVA   P  I  + I+   G+T E+   + D L  QG 
Sbjct: 144 TLDRKHAGPVVVASSHGGVNIEEVAATDPNAIITVPINISQGMTEENAIEIADKLGFQGD 203

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            +    D+F  LY  F   D +LLEINP+    +G +  +D KI  D NA YR  D+ +L
Sbjct: 204 CKTQAVDIFQKLYGLFAKSDATLLEINPMAEDVSGDVYCMDCKILVDTNAQYRQEDLFKL 263

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D S+ED  E+ A   +L+YI L+G+IGC+VNGAGLAMATMDIIKL+GG PANFLDVGGG
Sbjct: 264 QDRSQEDELEMRAAAAHLNYIRLEGDIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 323

Query: 303 ADQDKVAAAFKIITSD-SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           A   +V  AF+IIT D   V  IL+NIFGGIMRCDV+ +GI++A +E+ + IP+V+RL+G
Sbjct: 324 ATVQQVTEAFRIITDDKHQVHAILVNIFGGIMRCDVIAQGIINAARELNLKIPIVVRLQG 383

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             VD    LIA+S + ++   +LD+AA+ +V   
Sbjct: 384 TKVDDAKALIAQSEMRILACDNLDEAARLVVKLS 417


>gi|3821929|gb|AAC69706.1| GTP-specific succinyl-CoA synthetase beta subunit [Columba livia]
          Length = 391

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 162/382 (42%), Positives = 226/382 (59%), Gaps = 3/382 (0%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ+K ++  + V V +  V  S + A  A + L     V+K+QI AGGRGKG F    +
Sbjct: 1   EYQSKKIMADHGVTVQRFFVADSANDALEAAQRLKAKEIVLKAQILAGGRGKGVF---NS 57

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             KGGV +    K V    ++++G  L TKQT   G  V  V V +  +I RE Y ++L+
Sbjct: 58  GLKGGVHLTKDPKIVEQLAKQMIGYNLSTKQTPKDGVTVKKVMVAEALNISRETYFAILM 117

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR       + S QGG+DIEEVA   P+ IFK  ID   G+       +   L  +G  +
Sbjct: 118 DRACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGIKDHQALQMAKNLGFKGPLQ 177

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I  + D
Sbjct: 178 QQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDD 237

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
            SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  
Sbjct: 238 KSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLGGGVK 297

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
           + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV
Sbjct: 298 EAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPLVVRLEGTNV 357

Query: 365 DIGNRLIAESGLNVITAIDLDD 386
               R++ ESGL +++A DL+D
Sbjct: 358 HEAQRILNESGLPIMSANDLED 379


>gi|228473148|ref|ZP_04057905.1| succinyl-CoA synthetase beta chain [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275730|gb|EEK14507.1| succinyl-CoA synthetase beta chain [Capnocytophaga gingivalis ATCC
           33624]
          Length = 397

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 172/407 (42%), Positives = 246/407 (60%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V ++   A  A + L        YVVK+QIHA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVATTADEAVKAAEKLTEQTGTQWYVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLEQVKEISSQIIGMHLVTPQTPKEGKKVHQVLIAEDVFYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEYYMSILLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPELGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L L+G+A  +      +LYKA+   D +L EINP++   + ++  +D+K++ DDN
Sbjct: 171 NVAFNLGLEGEAFKEMVKFVTSLYKAYITSDANLFEINPVLKTSDNKILAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D  ELRD  EE   E+EAK   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAELRDTREERPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAARVETAFRIILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGT 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            I +P+++RL+G N +I   +I +SGL V +AI   +AA K+   +K
Sbjct: 351 DIKVPIIVRLQGTNAEIAKEIIDKSGLAVHSAIQFQEAADKVKEVLK 397


>gi|195152918|ref|XP_002017383.1| GL21555 [Drosophila persimilis]
 gi|194112440|gb|EDW34483.1| GL21555 [Drosophila persimilis]
          Length = 474

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 240/398 (60%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +  LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYTLLNESGIPTPRFAVAKNGKEASDIANKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    K+      +++   LITKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDAKTAEDISSKMIDQLLITKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVAK+ P  I    ID   G+T E    + + + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAKENPDAIIYEPIDIARGLTEEQACKIVEKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +   +  NLY+ F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGADEHIKMLLNLYQLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 SMRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V AAFKIITSD  V  +L+NIFGGIMRCDV+ +GI++A K++ +N+P+V+RL+
Sbjct: 335 GGATADAVKAAFKIITSDRKVLCLLVNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRASGLKILARDDLDKAADLAVHLAQIV 432


>gi|320108310|ref|YP_004183900.1| succinyl-CoA synthetase subunit beta [Terriglobus saanensis SP1PR4]
 gi|319926831|gb|ADV83906.1| succinyl-CoA synthetase, beta subunit [Terriglobus saanensis
           SP1PR4]
          Length = 392

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 190/400 (47%), Positives = 261/400 (65%), Gaps = 13/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LR Y VPV +G ++S++  A++A K L     P+ VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRHYGVPVPEGEMVSTIEEADTAAKQLFSAGNPVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  SL+   +  + ILG  LIT QTGP G +V  + +E G+ I RE
Sbjct: 55  ----GGRGKGGGVKVTKSLEDANAASKAILGMQLITHQTGPQGQKVQRLLIEAGSAIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL +++DR +  + F+AS  GGM+IEEVA + P  I+K  I+P +G+      +L   L
Sbjct: 111 LYLGIVLDRATAKLTFMASQAGGMEIEEVAAENPDAIYKEAIEPALGLQPYQARNLAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+             LYKAF + D SLLEINP I  K+ +L  LD KI+FDDNA++RH 
Sbjct: 171 GLKPTQINQAVQFMIGLYKAFIETDCSLLEINPFITTKDDKLMALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD++EED  E+EA +  L+YI LDGNI CMVNGAGLAMATMDII+  GG+ ANFL
Sbjct: 231 DLKELRDMAEEDPLEVEASKDALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGSAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q ++ AAF I+ +D +VK I INIFGGI+R DVL   +++A K + + +P+++
Sbjct: 291 DVGGGANQQQIEAAFAILLADPNVKAIFINIFGGILRVDVLATAVVAAAKNLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           RLEG NV+ G +++A+SGL+      + +AA   V A KG
Sbjct: 351 RLEGTNVEEGRKILADSGLHFEVGATMKEAADLAVVAAKG 390


>gi|308482626|ref|XP_003103516.1| hypothetical protein CRE_28780 [Caenorhabditis remanei]
 gi|308259937|gb|EFP03890.1| hypothetical protein CRE_28780 [Caenorhabditis remanei]
          Length = 415

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 176/395 (44%), Positives = 247/395 (62%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V K VV S+   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQKFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +     + +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  NGTKG-IGGVYITKEKNAALEAIDEMIGKRLVTKQTTEEGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P +IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQMGMTDGQALKIAKDLQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  +I 
Sbjct: 199 GNLLGAAATEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G+++AV ++ + +P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    ++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKLIMKKSGLTILTANNLDEAAAKAVSSL 413


>gi|303236646|ref|ZP_07323227.1| succinate-CoA ligase, beta subunit [Prevotella disiens FB035-09AN]
 gi|302483150|gb|EFL46164.1| succinate-CoA ligase, beta subunit [Prevotella disiens FB035-09AN]
          Length = 377

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 168/396 (42%), Positives = 232/396 (58%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV +G+V  +   A  A + L   L V+K+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKEFFASYGIPVQRGIVCRTPEEAVKAYEELGVELAVIKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V +    ILG  +        G  V+ V V    DI  E Y+
Sbjct: 58  -------GGVKLGKTAEEVRTHATNILGMDI-------KGFIVDRVLVCAALDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L DR S    F+ S +GGMDIE VAK+ P+KI K+ +DP +G+T      +   L   
Sbjct: 104 SILPDRKSKTAIFMVSREGGMDIEAVAKETPEKIAKISVDPTVGLTDAKAREIAFELFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q       LF  LY+ F +KD SL EINPL+I + G +  +D+K++FD+NAL+RH D+ 
Sbjct: 164 MQYVKQAVPLFKKLYQLFLEKDASLTEINPLVITEQGEVVAVDAKMTFDNNALFRHPDVF 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + +E++ +E  AK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTEDEKKEQFAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ SD  VK +LINIFGGI RCD + KG++ A K +  N+P+V+RL 
Sbjct: 284 GSSNPTKIVEAMKLLLSDEHVKVVLINIFGGITRCDDVAKGLIEAFKLIDTNMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G     A  + +A    V   K
Sbjct: 344 GTNEAEGRELLK--GTKFHVATTMSEAGHMAVDLCK 377


>gi|71747842|ref|XP_822976.1| succinyl-CoA ligase [GDP-forming] beta-chain [Trypanosoma brucei]
 gi|70832644|gb|EAN78148.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           brucei]
          Length = 506

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 177/391 (45%), Positives = 257/391 (65%), Gaps = 8/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+KALL++       GV  SS+   E+A+  + G   VVKSQI AGGRG G F 
Sbjct: 109 LNIHEYQSKALLKEGGCKTEFGVACSSIEEVEAALGKIKGDKKVVKSQILAGGRGMGTFV 168

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
           +     KGGV V       ++  R +L +TL+TKQTGP G +V+ +YV +    I RELY
Sbjct: 169 D---GFKGGVHVCKDAAEALACARRMLNNTLVTKQTGPKGQKVSRLYVTEAISGIKRELY 225

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+LL+DR +    FI S +GGM IEE+A+  P KI K+ I+   G+  ++  +    L  
Sbjct: 226 LALLLDRKTASPVFIGSAEGGMGIEELAQKQPDKIKKMRINVQEGINHDNCLTFAHELGF 285

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A  +  +    LY     KD +++EINPL+ ++NG +  +D+K+SFDDNA +R  DI
Sbjct: 286 TGRAAENAAEQIKALYNVGKSKDCTMVEINPLVELENGDVMCIDAKLSFDDNAEFRQHDI 345

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I   GG PANFLDV
Sbjct: 346 FALADATQIDPKEVVAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISHGGGKPANFLDV 405

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN----IPL 355
           GG A ++++ AAF+IIT D +V+ IL+NIFGGIMRCD + +GI++A + +K      +P+
Sbjct: 406 GGSATKEQIVAAFEIITGDEAVRSILVNIFGGIMRCDTIAEGIVAASRMLKSKGVREVPV 465

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           V+RL G+  + G R++ ESGL +  A + ++
Sbjct: 466 VVRLSGSKEEEGKRILKESGLPLHPAQNFEE 496


>gi|194750237|ref|XP_001957534.1| GF10458 [Drosophila ananassae]
 gi|190624816|gb|EDV40340.1| GF10458 [Drosophila ananassae]
          Length = 416

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 257/397 (64%), Gaps = 6/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  A    +K+   P YVVK+QI AGGRGKG F 
Sbjct: 23  LNLLEFQSKDLLQKYGVAIQQFKVLDNSKADADVVKSFECPEYVVKAQILAGGRGKGTFD 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S    V+S   +++G+ LITKQT  +G  VN V V    +I RE YL
Sbjct: 83  N---GFKGGVHITSDKSEVLSLSHKMIGNRLITKQTPKSGILVNKVMVARSVNITRETYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GGMDIE VA++ P+KI  + ++    +    +  +   LE +
Sbjct: 140 CILLDREHMGPVLIASPAGGMDIEAVAEETPEKIKTVPLNIDKPIPEATLIEVAKFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A     D    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI 
Sbjct: 200 GDAVKRCADEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIF 259

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + D++EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 260 NM-DITEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLD 318

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +D+VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+R
Sbjct: 319 VGGGVKEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVR 378

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG NV+    ++  SGL + TA DLDDAA K V A+
Sbjct: 379 LEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAAL 415


>gi|255536400|ref|YP_003096771.1| succinyl-CoA synthetase subunit beta [Flavobacteriaceae bacterium
           3519-10]
 gi|255342596|gb|ACU08709.1| Succinyl-CoA ligase [ADP-forming] beta chain [Flavobacteriaceae
           bacterium 3519-10]
          Length = 398

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 175/406 (43%), Positives = 242/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-----PGPLYVVKSQIHAGGRG 55
           MN+HEYQ+K +L KY V + +G V ++V  A  A   L         +VVK+Q+HA    
Sbjct: 1   MNLHEYQSKEILAKYGVTIQRGFVANNVEEAVDAANKLKEMTGGAEGWVVKAQVHA---- 56

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED----- 110
                       GGV+   +L+ +  + + I+G  L+T QT   G  VN V V +     
Sbjct: 57  ------GGRGKGGGVKFSPNLEKLKENAQNIIGMQLVTPQTSAEGKLVNSVLVAEDVYYP 110

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
           GA   +E Y+S+L+DR  G    + ST+GGMDIE VA+  P  I    IDP  G+     
Sbjct: 111 GASETKEFYVSILLDRAQGKNMIVYSTEGGMDIEHVAEVTPHLIHNETIDPATGLQGFQA 170

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             +   L L G A  D      +LY A+   D SL EINP++   + R+  +D+K+S DD
Sbjct: 171 RKIAFNLGLSGAAFKDFTKFITSLYNAYVGIDASLFEINPVLKTSDDRIIAVDAKVSLDD 230

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NAL+RH D+ ELRD  EED  ++EA +  L+++ LDG++ CMVNGAGLAMATMDIIKL G
Sbjct: 231 NALFRHKDLAELRDTREEDPTDVEAGEAGLNFVKLDGDVACMVNGAGLAMATMDIIKLSG 290

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLDVGG AD ++V  AF II  D +VK ILINIFGGI+RCD + +GI+ A K + 
Sbjct: 291 GNPANFLDVGGTADAERVQKAFGIILKDPNVKAILINIFGGIVRCDRVAQGIVDAYKAMG 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            + +PL++RL+G N     +LI +SGL V + I L++AA K+   +
Sbjct: 351 SLPVPLIVRLQGTNAVEAKQLIDDSGLPVHSVITLEEAANKVKEVL 396


>gi|323450948|gb|EGB06827.1| hypothetical protein AURANDRAFT_28673 [Aureococcus anophagefferens]
          Length = 409

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 180/384 (46%), Positives = 260/384 (67%), Gaps = 5/384 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ+ A++  + V V  G+  +SV  A +A K L G   V+KSQI AGGRG G F 
Sbjct: 20  LNLHEYQSAAIMASHGVNVPPGIAATSVADAVAAAKELGGDEVVIKSQILAGGRGLGTF- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV V  S K+      +++G+TL+TKQ+G  G  VN V V +  +++ E+Y 
Sbjct: 79  --TNGFQGGVHVIDSAKTA-EYAEKMIGATLVTKQSGAEGKPVNVVMVAEKMNLVNEMYF 135

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR  G    +A  +GG  IE++A+  P+KI K+ ID + G+T  +  ++   L + 
Sbjct: 136 AILLDRAFGGPVVVACAEGGTSIEDLAESSPEKIIKVPIDVVAGLTDANAEAIVAGLGVS 195

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +        +LY+ F   D +++E+NPL     G L   D+KI FDDNA +R  DI 
Sbjct: 196 GD-KEAAKKQIASLYEVFKSCDCTMVEVNPLAEDDQGTLIAADAKIGFDDNAAFRQKDIF 254

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD S+ED R++ A++ +L+YI LDG+IGCMVNGAGLAMATMDII+++GG+PANFLDVG
Sbjct: 255 AQRDESQEDPRDVAAEKWDLNYIGLDGSIGCMVNGAGLAMATMDIIQMHGGSPANFLDVG 314

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++++  AFKIITSDS+VK +L+NIFGGIM+CDV+ +GI++ VKEV + IPLV+RLE
Sbjct: 315 GSATKEQIVEAFKIITSDSNVKALLVNIFGGIMKCDVIAEGIVAGVKEVGLEIPLVVRLE 374

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV++G ++I ESGLN+ +A DL
Sbjct: 375 GTNVELGKKIIDESGLNITSADDL 398


>gi|194903565|ref|XP_001980893.1| GG13653 [Drosophila erecta]
 gi|190652596|gb|EDV49851.1| GG13653 [Drosophila erecta]
          Length = 505

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 237/398 (59%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+T+E    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTTEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLMNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 432


>gi|281361395|ref|NP_001163558.1| skpA associated protein, isoform C [Drosophila melanogaster]
 gi|281361397|ref|NP_001163559.1| skpA associated protein, isoform D [Drosophila melanogaster]
 gi|16197833|gb|AAL13560.1| GH10480p [Drosophila melanogaster]
 gi|272476881|gb|ACZ94855.1| skpA associated protein, isoform C [Drosophila melanogaster]
 gi|272476882|gb|ACZ94856.1| skpA associated protein, isoform D [Drosophila melanogaster]
          Length = 503

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 180/399 (45%), Positives = 239/399 (59%), Gaps = 4/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHLDI 239
           G        +  NLY  F  KD  L+EINP      +G    LD+K+ FDDNA +R  ++
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKEL 274

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 275 FALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDV 334

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL
Sbjct: 335 GGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRL 394

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 QGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 433


>gi|158297958|ref|XP_318074.3| AGAP004744-PA [Anopheles gambiae str. PEST]
 gi|157014577|gb|EAA13239.4| AGAP004744-PA [Anopheles gambiae str. PEST]
          Length = 446

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 239/398 (60%), Gaps = 4/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + + L +  +P  K  V +S   A+     L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYSFLNEAGIPTPKFGVATSGAEAKKIATDLNTKNLVLKAQVLAGGRGKGSFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPQEAEDISGKMINQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+  E    +   + L 
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDINKGLQKEQAVQVAKKVGLN 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +  N+Y  F  KD  L+EINP           LD+K+ FDDNA +R  D+ 
Sbjct: 210 DK-VEETAKMLLNMYDLFVKKDALLIEINPYAEDAAETYFALDAKMRFDDNAEFRQKDLF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+ED +E+EA + +L+YIALDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 AKRDLSQEDKKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSD  V  IL+NIFGGIMRCDV+ +GI+ A KE+ I +P+++RL+
Sbjct: 329 GGASVKAVKEAFKIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+    LI +S L ++   DLD+AA   VH  + V
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAMLSVHLAQIV 426


>gi|326335853|ref|ZP_08202032.1| succinyl-CoA synthase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691997|gb|EGD33957.1| succinyl-CoA synthase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 397

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 171/407 (42%), Positives = 244/407 (59%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V +S   A  A + L        YVVK+QIHA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVATSADEAVKAAEKLTEQTGTQWYVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QT   G  V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQQVKEISSQIIGMHLVTPQTPKEGKEVHQVLIAEDVFYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA + P  IF   +DP +G+      
Sbjct: 111 ESEPKEYYMSILLNRAKGKNMIMYSTEGGMDIESVAANTPHLIFTEEVDPELGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L L+G+A  +      +LYKA+   D +L EINPL+   + ++  +D+K++ DDN
Sbjct: 171 NIAFNLGLEGEAFKEMVKFVTSLYKAYISSDANLFEINPLLKTSDSKILAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   LRD  EE   E+EAK   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAALRDTREERPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAARVETAFRIILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGS 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            I +P+++RL+G N +I   +I +SGL V +AI   +AA K+   ++
Sbjct: 351 AIKVPIIVRLQGTNAEIAKEIIDKSGLAVHSAIQFQEAADKVKEVLR 397


>gi|308482588|ref|XP_003103497.1| hypothetical protein CRE_28686 [Caenorhabditis remanei]
 gi|308259918|gb|EFP03871.1| hypothetical protein CRE_28686 [Caenorhabditis remanei]
          Length = 415

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 176/395 (44%), Positives = 247/395 (62%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V K VV S+   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQKFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +     + +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  NGTKG-IGGVYITKEKTAALEAIDEMIGKRLVTKQTTEEGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P +IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQMGMTDGQALKIAKDLQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  +I 
Sbjct: 199 GNLLGAAATEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G+++AV ++ + +P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    ++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKLIMKKSGLTILTANNLDEAAAKAVSSL 413


>gi|157130276|ref|XP_001661866.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108871926|gb|EAT36151.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 446

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 241/398 (60%), Gaps = 4/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +   L +  +P  K  V +S   AE   K L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYTFLNEAGIPTPKFGVANSAQDAEKIAKGLNTKNLVLKAQVLAGGRGKGTFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPQEARDISGKMIKQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+      ++   + L+
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDIKAGLQKAQALAIAKKVGLE 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   +  N+Y  F  KD  L+EINP           LD+K+ FDDNA +R  D+ 
Sbjct: 210 DHA-EETAKMLLNMYDLFVKKDALLIEINPYAEDAGETYFALDAKMRFDDNAEFRQKDLF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+EDS+E+EA + +L+YIALDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 AKRDLSQEDSKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AF+IITSD  V  IL+NIFGGIMRCDV+ +GI+ A KE+ I +P+++RL+
Sbjct: 329 GGASVKAVKEAFRIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+    LI +S L ++   DLD+AA   VH  + V
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAMLSVHLAQIV 426


>gi|1711579|sp|Q03184|SUCB_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
           hydrogenosomal; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
 gi|162521|gb|AAA30326.1| succinyl-CoA synthetase beta-subunit [Trichomonas vaginalis]
          Length = 407

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 251/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  KYNV     +V  S   A  A + +  P  V+K+Q++ GGRGKG + E
Sbjct: 11  NILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGHWLE 70

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 71  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFA 128

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L G
Sbjct: 129 ILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTG 188

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G      L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 189 KAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 248

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+GG
Sbjct: 249 YRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLGG 308

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A +  V   F II+  S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 309 AASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLEG 368

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NV+ G +LI ESGL +I+A +L DA +K V A KG
Sbjct: 369 TNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKG 404


>gi|226480678|emb|CAX73436.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit [Schistosoma
           japonicum]
          Length = 434

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 168/399 (42%), Positives = 244/399 (61%), Gaps = 9/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----GPLYVVKSQIHAGGRGK 56
           + +HEY A  LL+KY +PV K VV+ S+   ++A K           V+K+Q+ AGGRGK
Sbjct: 22  LKVHEYLALGLLKKYEIPVPKFVVVRSIDEVKAACKEFGETTESTDVVLKAQVLAGGRGK 81

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G +    +  KGGV++  S+   IS    +LG  + T QTG +G   N +   +     R
Sbjct: 82  GIWD---SGLKGGVKIVYSVDEAISVANRMLGHRIFTAQTGDSGQLCNTLLACERKYSRR 138

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YL++++DR+SG    +   QGG++IE++A+D P  + K+ ID   G+  +D   +   
Sbjct: 139 EHYLAIVLDRSSGGPVMVGCKQGGVNIEDIARDNPDALIKIPIDIDKGLDKKDAVMMAHK 198

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L        +       LYK F   D +LLEINP+    NG +  +D K++FDDNA +R 
Sbjct: 199 LGFSHS--DEAAVYIERLYKLFDSTDCTLLEINPISQDINGHVICMDCKMNFDDNAAFRQ 256

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD S+ED R+++A    L+YI LDGNIGC+VNGAGLAMATMD+I+L+GG PANF
Sbjct: 257 KEIFAQRDWSQEDERDVKATNAGLNYIGLDGNIGCLVNGAGLAMATMDLIQLHGGNPANF 316

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA   +V  AF++ITSD  V  IL+NIFGGIMRCD++ +GI++A  E+ I +P++
Sbjct: 317 LDVGGGATATQVTEAFRLITSDPKVNAILVNIFGGIMRCDIIAQGIVAAATELNIKVPII 376

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G  V+    +IA S + ++   DLD+AA   V   
Sbjct: 377 VRLQGTRVEDAKAIIATSHMKILGCSDLDEAAHMSVKLA 415


>gi|292669154|ref|ZP_06602580.1| succinyl-CoA ligase subunit beta [Selenomonas noxia ATCC 43541]
 gi|292649206|gb|EFF67178.1| succinyl-CoA ligase subunit beta [Selenomonas noxia ATCC 43541]
          Length = 396

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 173/401 (43%), Positives = 249/401 (62%), Gaps = 16/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ+K +LR++ V V  G+   SV  A +  + L  P+ VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQSKQILREFGVNVPNGLPAFSVQEAVTNAEKLDTPVVVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + V +  +E+LG  L+T QTGP G  V  + +E+ + I +E YL
Sbjct: 58  -------GGVKLAKSAEEVRAVAQELLGKVLVTHQTGPEGKVVERLLIEEASKIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  + S +GG++IE+VA + P+KI K  IDP+IG+       +   + + 
Sbjct: 111 SFIIDRHTASVVMMGSEEGGVEIEKVAAETPEKIIKEYIDPVIGLAGFQATRMAYAINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A          LY AF DKD S LEINPL++ ++ ++ VLD+K++FDD+AL+RH DI 
Sbjct: 171 ETAIRRAVSTMQKLYTAFVDKDCSQLEINPLVLTEDDKIVVLDAKLNFDDSALFRHSDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD SEED +E  A    L+Y+ L G++ CMVNGAGLAMAT+D++K YGG PANFLDVG
Sbjct: 231 MLRDESEEDPKERIAAAAGLNYVNLGGDVACMVNGAGLAMATVDMLKFYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVKINIPL 355
           G +  +K+A AF I+      KGI +NI GGI RCD + KGI+ A          + +P+
Sbjct: 291 GDSAPEKIAKAFSIMLEGGQAKGIFVNIMGGINRCDNIAKGIIEAAHIISKDGSSLPVPV 350

Query: 356 VMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           V+RLEG+ V+ G  ++  + + NV  A  ++  A++IV  V
Sbjct: 351 VVRLEGSMVEEGREILRNTPITNVFAAPTMEGGAEQIVKLV 391


>gi|157148044|ref|YP_001455363.1| hypothetical protein CKO_03851 [Citrobacter koseri ATCC BAA-895]
 gi|157085249|gb|ABV14927.1| hypothetical protein CKO_03851 [Citrobacter koseri ATCC BAA-895]
          Length = 389

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 188/399 (47%), Positives = 262/399 (65%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           MN+HEYQAK+LL    +P  K + I  +     A +T+       V+K+Q+HAGGRGK  
Sbjct: 1   MNLHEYQAKSLLAGMGMPCPKEIAIQHITELPEAWRTISSENKGAVLKAQVHAGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRE 117
                    GGV+V +      +   ++LGS L+T QTG  G  V+ + V +    + +E
Sbjct: 60  ---------GGVKVLTQFSQAETFAVQMLGSQLVTYQTGSEGQYVSRILVCENIYPVRQE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LY  ++VDR S  V FI S++GG++IE+VA D P+KI K+ +DPL G+    V  L  +L
Sbjct: 111 LYFGVVVDRESQRVTFIVSSEGGVEIEKVAHDTPEKIDKVSVDPLTGIQPCHVRELFAVL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+         L    +KAF + D +LLEINPL+I +NG     D+K++ DDNALYRH 
Sbjct: 171 GLEKTLYSGFSQLVNQAWKAFNELDFALLEINPLVICENGEFMCADAKVTLDDNALYRHP 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           ++Q LRD ++ED RE +A + +L+Y+ALDG IGCMVNGAGLAMATMDIIKLYG  PANFL
Sbjct: 231 ELQALRDETQEDERENQAAKLDLNYVALDGAIGCMVNGAGLAMATMDIIKLYGAQPANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA Q++V+ AF++I SD  V+GIL+NIFGGI+RCD++ + I+ A+ E +I +P+V+
Sbjct: 291 DVGGGATQERVSEAFRLIVSDKKVQGILVNIFGGIVRCDMIARAIIHALHEEQITLPVVV 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G +   G RL+AESGL V     LDDAA++I+  +K
Sbjct: 351 RLSGNHATEGQRLLAESGLAVEAVDSLDDAAKRIIALLK 389


>gi|170039565|ref|XP_001847601.1| succinyl-coa synthetase beta chain [Culex quinquefasciatus]
 gi|167863119|gb|EDS26502.1| succinyl-coa synthetase beta chain [Culex quinquefasciatus]
          Length = 446

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 243/398 (61%), Gaps = 4/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + + L +  +P  K  V +S   AE   K L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYSFLNEAGIPTPKFGVATSAQEAEKIAKDLNTKNLVLKAQVLAGGRGKGTFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S K   +   +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPKEAQAIGGKMINQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+      ++   + L+
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDIKAGLQKNQALAIAKKVGLE 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +   +  N+Y  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 210 DHA-EETAKMLLNMYDLFVKKDALLIEINPYAEDAGETYFALDAKMRFDDNAEFRQKELF 268

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+ED +E+EA + +L+YIALDG+IGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 269 AKRDLSQEDKKEVEASKFDLNYIALDGSIGCMVNGAGLAMATMDIIKLHGGDPANFLDVG 328

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AFKIITSD  V  IL+NIFGGIMRCDV+ +GI+ A +E+ I +P+++RL+
Sbjct: 329 GGATVNAVREAFKIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATRELNIKMPIIVRLQ 388

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV+    LI +S L ++   DLD+AA   VH  + V
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAMLSVHLAQIV 426


>gi|255019808|ref|ZP_05291884.1| Succinyl-CoA ligase [ADP-forming] beta chain [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970737|gb|EET28223.1| Succinyl-CoA ligase [ADP-forming] beta chain [Acidithiobacillus
           caldus ATCC 51756]
          Length = 387

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 193/386 (50%), Positives = 254/386 (65%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +  V V +G+   S+  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKRLLAEAGVTVPRGIPAFSLKEAINQARELGGPRWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  S+ +V    + +LG  L+T QTGP G  V  + +E+ + +LRE YL
Sbjct: 58  -------GGVRVVDSIAAVEQAAQALLGKPLVTAQTGPEGQHVAALLIEEPSVLLREFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR S  + F+AS +GG++IEE+A++ PQ I  + IDP +G        L     L+
Sbjct: 111 ALVVDRASARMRFVASDRGGVEIEELAREQPQAIASITIDPRVGFLPYQGRQLGFAWGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A          + +     D  ++EINPL +   GRL  LD+KIS DDNALYRH +  
Sbjct: 171 PAAVQQLVRTMQAMARLAPQLDALMIEINPLALTAEGRLLALDAKISMDDNALYRHPESD 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL D +++D REI A+Q  L+YI+L GNIGCMVNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 231 ELFDSTQQDGREITARQFGLNYISLGGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  DKV  AFK+I SD  V+ IL+NIFGGI RCD+L +GIL A +EV I++P+V+RLE
Sbjct: 291 GGAAADKVTQAFKLILSDQRVRAILVNIFGGITRCDLLAQGILQAAREVGIHLPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N + G  L+ ESGL +ITA  LDD
Sbjct: 351 GTNREEGLALLRESGLALITAEGLDD 376


>gi|195330554|ref|XP_002031968.1| GM23771 [Drosophila sechellia]
 gi|194120911|gb|EDW42954.1| GM23771 [Drosophila sechellia]
          Length = 502

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 179/398 (44%), Positives = 237/398 (59%), Gaps = 3/398 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSGKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F  KD  L+EINP           LD+K+ FDDNA +R  ++ 
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+
Sbjct: 335 GGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQ 394

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 GTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 432


>gi|320542548|ref|NP_001189197.1| skpA associated protein, isoform E [Drosophila melanogaster]
 gi|320542550|ref|NP_001189198.1| skpA associated protein, isoform F [Drosophila melanogaster]
 gi|318068741|gb|ADV37288.1| skpA associated protein, isoform E [Drosophila melanogaster]
 gi|318068742|gb|ADV37289.1| skpA associated protein, isoform F [Drosophila melanogaster]
          Length = 452

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 180/399 (45%), Positives = 239/399 (59%), Gaps = 4/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 98  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 155 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHLDI 239
           G        +  NLY  F  KD  L+EINP      +G    LD+K+ FDDNA +R  ++
Sbjct: 215 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEFRQKEL 274

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD ++ED +E+EA ++NL+YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDV
Sbjct: 275 FALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDV 334

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  + V AAFKIITSD  V  IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL
Sbjct: 335 GGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRL 394

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +G  V     LI  SGL ++   DLD AA   VH  + V
Sbjct: 395 QGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIV 433


>gi|123477791|ref|XP_001322061.1| Succinyl-CoA ligase beta-chain, hydrogenosomal precursor
           [Trichomonas vaginalis G3]
 gi|121904900|gb|EAY09838.1| Succinyl-CoA ligase beta-chain, hydrogenosomal precursor
           [Trichomonas vaginalis G3]
          Length = 407

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 250/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  KYNV     +V  S   A  A + +  P  V+K+Q++ GGRGKG + E
Sbjct: 11  NILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGHWLE 70

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 71  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFA 128

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L G
Sbjct: 129 ILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTG 188

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G      L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 189 KAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 248

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ +    EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+GG
Sbjct: 249 YRDLKQVSPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLGG 308

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A +  V   F II+  S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 309 AASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLEG 368

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NV+ G +LI ESGL +I+A +L DA +K V A KG
Sbjct: 369 TNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKG 404


>gi|153952227|ref|YP_001398439.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|189046904|sp|A7H4K9|SUCC_CAMJD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|152939673|gb|ABS44414.1| succinyl-CoA synthase, beta subunit [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 387

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 187/396 (47%), Positives = 245/396 (61%), Gaps = 11/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKA+     +   KG V  SV  A S  K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG  L+T QTGP G  V  +Y+E GA+I++E YL
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L +R +  +  IAS++GGMDIE+VAK+ P KI K+ IDP IG        +  +L L 
Sbjct: 111 AILFNRMAEQITIIASSEGGMDIEKVAKESPGKIAKVGIDPQIGFKMFHGLEVARVLGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK + DKDM++LEINPLI    G    LD+K SFDD+ALYRH +I 
Sbjct: 171 KDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD++EE+  E EA +  LSY+ LDG++ CMVNGAGLAMATMDII   G  PANFLDVG
Sbjct: 231 ELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I INIFGGI+RCD +  GIL A K V++NIP+V+RL+
Sbjct: 291 GGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLD 350

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
           G N      ++  S L N+  A +L + A+ +   V
Sbjct: 351 GTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLV 386


>gi|17539378|ref|NP_501266.1| hypothetical protein C50F7.4 [Caenorhabditis elegans]
 gi|1710876|sp|P53589|SUCB2_CAEEL RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
           beta, mitochondrial; AltName: Full=Succinyl-CoA
           synthetase beta chain; Short=SCS-beta; Flags: Precursor
 gi|1118094|gb|AAA83304.1| Hypothetical protein C50F7.4 [Caenorhabditis elegans]
          Length = 415

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 177/395 (44%), Positives = 250/395 (63%), Gaps = 1/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K +L K+   V   VV S+   AE    +     YVVK+QI AGGRGKG+F 
Sbjct: 20  LNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGKFI 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +     + +  I E++G  L+TKQT   G RV+ V + +G DI RE YL
Sbjct: 80  NGTKG-IGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     +AS  GGMDIE VA+  P++IFK  ID  +G+T      +   L+ +
Sbjct: 139 AVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDLQFE 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+           LY  F   D + +EINPL+   +GR+  +D+K++FDD+A YR  +I 
Sbjct: 199 GKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYRQKEIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E D RE++A Q NL+YI +DGNI C+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 259 AYETFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D V  A +IITSD  VK +LINIFGGI+ C  +  G++SAV ++ +N+P+V+RLE
Sbjct: 319 GAVTEDAVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLE 378

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ +SGL ++TA +LD+AA K V ++
Sbjct: 379 GTNVDAAKQIMKKSGLKILTANNLDEAAAKAVSSL 413


>gi|86133730|ref|ZP_01052312.1| Succinyl-CoA synthetase, beta subunit [Polaribacter sp. MED152]
 gi|85820593|gb|EAQ41740.1| Succinyl-CoA synthetase, beta subunit [Polaribacter sp. MED152]
          Length = 398

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 168/407 (41%), Positives = 241/407 (59%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V S+   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILNSFGVRIQRGIVASTPIEAVAAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S   +ILG  LIT QT   G  VN V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLEQVESIADDILGMMLITPQTSAEGKLVNQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDPL+G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGKNMIMYSTEGGMDIETVAEETPHLIFTEEIDPLLGLMPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D S+ EINP++   + ++  +D+K+S D+N
Sbjct: 171 KVAFNLGLSGTAFKEMTKFVSALYTAYIKSDSSMFEINPVLKTSDDKIMAVDAKVSLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD+ EE+  E+EAK   L+Y+ LDGN+GCMVNGAGLAM TMD+IK  GG
Sbjct: 231 ALFRHKDYAAMRDLREENPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMGTMDLIKESGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AF II  D +VK IL+NIFGGI+RCD + +G++ A + +  
Sbjct: 291 EPANFLDVGGTADAQRVETAFGIILKDENVKAILVNIFGGIVRCDRVAQGVVDAYQSMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           KI +P++ RL+G N      LI  SG+ +I+A +  +AA K+   ++
Sbjct: 351 KITVPIICRLQGTNAKEAKELIDNSGMEIISATEFQEAADKVAEVLE 397


>gi|251792225|ref|YP_003006946.1| succinyl-CoA synthetase subunit beta [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533613|gb|ACS96859.1| succinyl-CoA synthetase beta chain (SCS-beta) [Aggregatibacter
           aphrophilus NJ8700]
          Length = 389

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 187/397 (47%), Positives = 262/397 (65%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ+K +  +Y++P+ +G+   +V  A  AIK L G ++  K Q+HA         
Sbjct: 1   MNLHEYQSKQVFTEYDLPICRGIACKTVDEAAEAIKQLKGGVWAAKCQVHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   V +   + LG  L+T QT   G  +N +YVE+  +I RELYL
Sbjct: 52  -GGRGKVGGVKLVSNEAEVRAFADKWLGQRLVTFQTDANGQPINIIYVEETVNIDRELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  V F+AS  GGMDIEE+A   P+ + K+ +DPL+G        L   L L+
Sbjct: 111 GAVIDRASQKVVFMASAAGGMDIEEMAVKTPELLHKVALDPLVGGMPYQGRELAFKLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +F  L K F ++D+SLLEINPL++ K G+L  LD+KI  D NALYR LD+ 
Sbjct: 171 GDQINQFTHIFTQLAKMFVERDLSLLEINPLVVTKEGKLSCLDAKIVVDSNALYRQLDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D+++ D+RE  A+ H L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVG
Sbjct: 231 TMHDITQSDAREALAELHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  +++VA AFKII SD +VK +L+NIFGGI+RCD++ +GI++AV +V +++P+V+RLE
Sbjct: 291 GGTTKERVAEAFKIILSDKNVKAVLVNIFGGIVRCDLIAEGIVAAVNQVGVHVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N  +G  ++A SGLN+I A  L DAA + V A  G
Sbjct: 351 GNNAPLGREILANSGLNIIAAKTLTDAAVESVKAANG 387


>gi|154148943|ref|YP_001406693.1| succinyl-CoA synthetase beta chain (SCS-alpha)(vegetative protein
           63) (VEG63) [Campylobacter hominis ATCC BAA-381]
 gi|189046902|sp|A7I2F2|SUCC_CAMHC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|153804952|gb|ABS51959.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Campylobacter hominis ATCC BAA-381]
          Length = 387

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 237/398 (59%), Gaps = 14/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK L R++ + V+ G +  S   A    K L G ++ VK+QIHA         
Sbjct: 1   MNIHEYQAKELCREFGINVSNGALALSADEAVEVAKKLGGNVWAVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +L  V     +ILG TL+TKQTGP G  V  +Y+E G +I +E Y+
Sbjct: 52  -GGRGLGGGVKIAKNLDEVKKYANQILGMTLVTKQTGPKGKLVRKIYIEQGCNIKKEFYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL  +R    +  IAS  GGM IEEV K+    I  L IDP IG+ +     + D L   
Sbjct: 111 SLTFNRAKEQIGLIASASGGMGIEEVDKN---LIKTLNIDPQIGLKAFHAYEVGDFLGFD 167

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LYK +   D +L+EINP+++        LD+K+ FDD AL+RH +I 
Sbjct: 168 KDLNNKFYKFLNGLYKLYIATDANLVEINPMVLTAEDEFFALDAKMGFDDAALFRHENIA 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD+ EE+S E+EAKQ+ LSY+ LDG+IGCMVNGAGLAM TMD I   GG  ANFLDVG
Sbjct: 228 AMRDLDEEESSEVEAKQYGLSYVKLDGDIGCMVNGAGLAMGTMDTITYCGGKSANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA AF+II  D +VK I +NIFGGI+RCD + KGIL A K  K+ IP+V+RL+
Sbjct: 288 GGASAETVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIAKGILEATKLTKVEIPVVVRLD 347

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKG 397
           G N      L+ E+ + N+ +A DL++ A+  V  V G
Sbjct: 348 GTNAKEAIELLKEANIENIYSAHDLEEGAKLAVKLVNG 385


>gi|331222831|ref|XP_003324089.1| succinyl-CoA ligase beta-chain [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309303079|gb|EFP79670.1| succinyl-CoA ligase beta-chain [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 419

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 165/386 (42%), Positives = 241/386 (62%), Gaps = 4/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL +Y +P        +   A    ++   P+ V+K+Q+ AGGRGKG F 
Sbjct: 28  LSIHEYMSMGLLNEYGIPTPISKAAKTPQEAHKIAESFGKPM-VIKAQVLAGGRGKGHF- 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     KGGV++  + +  +   ++++G  LITKQTG  G   N V + +  +   E Y+
Sbjct: 86  EGKDGLKGGVQMVDTPEQALQYAKQMIGHKLITKQTGAAGRICNAVMLAEKREPSHEYYV 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR+    A +AS QGGM+IEEVA   P  I    ID   G++ ++   +   L ++
Sbjct: 146 AILNDRSLNGPALVASAQGGMNIEEVAAKDPSAIHTFPIDFQKGLSKQEGVEIAKTLGIK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+F NLY+ F DKD + +EINPL   K+G +  +D+K+ FD+NA +R   + 
Sbjct: 206 DHSA--AADIFINLYRLFKDKDATQIEINPLAETKDGAVLCMDAKLGFDENAEFRQEKVF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED  E+EA ++ L+ I LDGNIGC+VNGAGLAMATMD++KL GG PANFLDVG
Sbjct: 264 QLRDRSQEDPTEVEAAEYGLNLIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF++ITSD  VK I +NIFGGIMRCDV+ +GI+ A  E+ ++IPL++RL+
Sbjct: 324 GGATAEAVKKAFELITSDKGVKSIFVNIFGGIMRCDVIAEGIIKATNELSLDIPLIVRLQ 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G       +LI ES + +     LD+
Sbjct: 384 GTKEKEAKKLIKESKMKIFAFDGLDE 409


>gi|2351685|gb|AAB68609.1| adhesin protein AP51-1 [Trichomonas vaginalis]
          Length = 403

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 177/396 (44%), Positives = 251/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  KYNV     +V  S   A  A + +  P  V+K+Q++ GGRGKG + E
Sbjct: 7   NILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGHWLE 66

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 67  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFA 124

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L G
Sbjct: 125 ILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTG 184

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G      L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 185 KAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 244

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+GG
Sbjct: 245 YRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLGG 304

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A +  V   F II+  S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 305 AASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLEG 364

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NV+ G +LI ESGL +I+A +L DA +K V A KG
Sbjct: 365 TNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKG 400


>gi|170571332|ref|XP_001891688.1| succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial,
           putative [Brugia malayi]
 gi|158603672|gb|EDP39510.1| succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial,
           putative [Brugia malayi]
          Length = 434

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 166/397 (41%), Positives = 250/397 (62%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+Q  +LL++ ++PVA   V  +V    +  + + G   V+K+Q+  GGRGKG F+
Sbjct: 23  LSLKEHQGISLLKQADIPVAPFGVSRNVDELYNEARKIGGKDLVIKAQVLTGGRGKGYFE 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S +        +LGS + TKQTG +G   + V V       RE Y 
Sbjct: 83  ---SGLEGGVQLVFSPEEAREKASMMLGSKIFTKQTGASGKLCDEVMVCKRLFTRREFYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +G    I S++GG++IEEVA   P  I K  I+   G+   + +S+ D +  +
Sbjct: 140 SITMDRHTGGPVAIGSSKGGVNIEEVAAKDPSAIVKCPINIFEGMKDAEASSVADRMGFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              RI   ++F  LY  F   D +L+EINP+    +G+L  LD K++ D NA +R  ++ 
Sbjct: 200 DDLRIQAANIFKKLYNLFIKYDATLIEINPMAEDISGKLYCLDCKLNIDSNASHRQTELF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D  ++D  E+ A + +L+YI LDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 260 AMEDQQQQDPLELRAAKADLNYIRLDGNIGCMVNGAGLAMATMDIIKLHGGDPANFLDVG 319

Query: 301 GGADQDKVAAAFKIITSD-SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGA  ++VA AF+IIT+D   V  IL+NIFGGIMRCDV+ +G+++AV E+++ +P+V+RL
Sbjct: 320 GGATVEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIAQGMINAVNELQLKVPVVVRL 379

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +G  V+    LIA + L +I+  DLD AA+ +V   +
Sbjct: 380 QGTRVEDAKALIAAANLRMISCDDLDQAAKMVVKLSE 416


>gi|305664827|ref|YP_003861114.1| succinyl-CoA synthetase subunit beta [Maribacter sp. HTCC2170]
 gi|88707949|gb|EAR00188.1| Succinyl-CoA synthetase, beta subunit [Maribacter sp. HTCC2170]
          Length = 397

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 167/406 (41%), Positives = 241/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  S   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHSPKEAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V      I+G  LIT QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEEVAGNIIGMNLITPQTSAEGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L+DR  G    + ST+GGMDIEEVA+  P  IF   +DP  G+      
Sbjct: 111 DSETSEFYMSVLLDRGKGRNMIMYSTEGGMDIEEVAEKTPHLIFTEEVDPSTGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D ++ EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGMAFKEMTKFVASLYKAYVESDSNMFEINPVLKTSDDKIMAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     E+RD+ EE+  E+EA+   LSY+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALYRRKQYAEMRDLREENPIEVEARAVGLSYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D++VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDANVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N ++   +I  SGL V +A+   +AA K+   +
Sbjct: 351 AITVPIIVRLQGTNAELAKEIIDNSGLAVHSAVQFQEAADKVKEVL 396


>gi|2351689|gb|AAB68611.1| adhesin protein AP51-3 [Trichomonas vaginalis]
          Length = 405

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 252/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  K+NV     VV  +   A +A K +  P  V+K+Q++ GGRGKG +KE
Sbjct: 9   NILEWQSKEICAKFNVAAGINVVARTPEEAAAAFKKIGLPAAVIKAQVYCGGRGKGHWKE 68

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 69  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFA 126

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K ++D + G+T E   ++   L L G
Sbjct: 127 ILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKIHKFVLDGVQGITEEVAQTISKKLGLTG 186

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 187 KAYENGVEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 246

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+GG
Sbjct: 247 YRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLGG 306

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A +  V   F II+S S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 307 AASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVRAGVIAAFKKVGLKVPLVVRLEG 366

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NVD G +L+ ESGL +I A +L DA  K V A  G
Sbjct: 367 TNVDAGKKLLRESGLPIIPADNLTDAGIKAVKAANG 402


>gi|163757177|ref|ZP_02164278.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Kordia algicida OT-1]
 gi|161322853|gb|EDP94201.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Kordia algicida OT-1]
          Length = 397

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 171/406 (42%), Positives = 244/406 (60%), Gaps = 22/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G V S+   A    K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRVQRGKVASTPAEAVEVAKQLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  L+T QT   G RV+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEDIAGQIIGMDLVTPQTSAEGKRVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   +DP  G+      
Sbjct: 111 DSEPNEFYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPHLIFTEEVDPAQGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+   D SL EINP++   + ++  +D+K++ D+N
Sbjct: 171 KVAFNLGLSGTAFKEMTRFVSSLYKAYVASDSSLFEINPVLKTSDDKIMAVDAKVTLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD+ EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALFRHKDYAAMRDLREENPIEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDENVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N DI   LI  SGL V +A++  +AA K V AV
Sbjct: 351 AIKVPIIVRLQGTNADIAKELIDNSGLAVESAVEFQEAADK-VQAV 395


>gi|158292075|ref|XP_313633.4| AGAP004352-PA [Anopheles gambiae str. PEST]
 gi|157017261|gb|EAA09142.4| AGAP004352-PA [Anopheles gambiae str. PEST]
          Length = 423

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 251/398 (63%), Gaps = 4/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    ++     A+  +K      YVVK+QI AGGRGKG F 
Sbjct: 30  LNLLEYQSKKLLEESGVAIQNFRILEGKKDAD-VLKDFDVNEYVVKAQILAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +  +   VI  + +++G  LITKQT   G  V  V V D  +I+RE YL
Sbjct: 89  N---GFKGGVHITKNRAEVIPLVEKMVGHKLITKQTPKDGILVKKVMVADSINIVRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P +I  + ID   G++ E    +   LE +
Sbjct: 146 SIVMDREHNGPVLIASPDGGMDIEAVAEETPNRIKTIPIDITSGISREQAIDVARFLEFK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D   +EINPL    +GR+  +D+K++FDDNA +R  DI 
Sbjct: 206 GFLVDKAADEITKLYGLFTKVDAVQIEINPLAETDDGRVISVDAKLNFDDNAQFRQKDIF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +E+EA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 266 AMEVHEDTDPKEVEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AF+I+TSD++VK IL+N+FGGI+ C  +  GI++A K + + +PL++RLE
Sbjct: 326 GNVKEDQVLKAFQILTSDTNVKAILVNVFGGIVNCATIANGIVNATKTMNLQVPLIVRLE 385

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV    +++ +SGL + +A DLD+AA+K V +++ V
Sbjct: 386 GTNVQAAKKILEQSGLKIESAHDLDEAAKKAVQSIRTV 423


>gi|312888782|ref|ZP_07748345.1| succinyl-CoA synthetase, beta subunit [Mucilaginibacter paludis DSM
           18603]
 gi|311298657|gb|EFQ75763.1| succinyl-CoA synthetase, beta subunit [Mucilaginibacter paludis DSM
           18603]
          Length = 397

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 184/403 (45%), Positives = 247/403 (61%), Gaps = 20/403 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ KA+L+ + V + +G+V  +V  A  A K L         VVK+QIHA     
Sbjct: 1   MNIHEYQGKAILKSFGVRIQEGIVADNVEQAVEAAKKLKEDFGSDWVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  ++  V      ILG  L+T QTGP G  V+ V V       G
Sbjct: 56  -----GGRGKGGGVKLARNIDEVKEKAGAILGMQLVTPQTGPEGKLVSKVLVAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L+DR +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+ +    
Sbjct: 111 ATETKEFYMSVLLDRAAGRNIIMYSTEGGMDIEEVAEHTPHLIFKEEIDPKVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LYKA+   D ++ EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGDAFKDMVKFVAALYKAYDATDSAMFEINPVLKTSDNKILAVDAKVNLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   LRD +EED  E+EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDFAALRDTAEEDPMEVEASRSNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V AAF II  D +VK ILINIFGGI+RCD + +G++ A  E+  
Sbjct: 291 EPANFLDVGGTANAQTVKAAFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYNEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           I +P+++RL+G N +   +LI ESGL V +AI L +AA +I  
Sbjct: 351 IPVPIIVRLQGTNAEEAKKLIDESGLQVKSAILLKEAADRIKE 393


>gi|332521818|ref|ZP_08398269.1| succinyl-CoA synthetase, beta subunit [Lacinutrix algicola
           5H-3-7-4]
 gi|332042648|gb|EGI78849.1| succinyl-CoA synthetase, beta subunit [Lacinutrix algicola
           5H-3-7-4]
          Length = 397

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 175/402 (43%), Positives = 244/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K LL  + V + +G+V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKELLSSFGVRIQRGIVAQNADEAVTAAKKLTEDTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V S   +I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKSIANDIIGMDLVTPQTSAEGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRGTGRNMIMYSTEGGMDIETVAEETPHLIFTEEIDPATGILPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D      +LY A+   D SL EINP++   + ++  +D+K++ D N
Sbjct: 171 KVAFNLGLSGAAFKDMTKFVTSLYTAYVKSDSSLFEINPVLKTSDDKIMAVDAKVTLDAN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ ELRD+ EE   E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHKDLAELRDIREESPIEVEAGELGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEAAFRIILKDPAVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
            IN+P+++RL+G N DI   LI  SGL+V++A +  +AA K+
Sbjct: 351 AINVPIIVRLQGTNADIAKELIDSSGLDVMSATEFQEAADKV 392


>gi|123412039|ref|XP_001303981.1| adhesin protein AP51-2 [Trichomonas vaginalis G3]
 gi|121885402|gb|EAX91051.1| adhesin protein AP51-2, putative [Trichomonas vaginalis G3]
          Length = 409

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 178/396 (44%), Positives = 252/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  K+NV     +V  +   A +A K +  P  V+K+Q++ GGRGKG +KE
Sbjct: 12  NILEWQSKEICAKFNVAAGINLVARTPEEAAAAFKKMGLPAAVIKAQVYCGGRGKGHWKE 71

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 72  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGADGLLCQAVMLSDPVEVKRELYFA 129

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K  +D + G+T +   ++   L L G
Sbjct: 130 ILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKILKFQLDGVEGITRDVAVNISKQLGLTG 189

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 190 KAYENGIEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 249

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+IKL GG PANFLD+GG
Sbjct: 250 YRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDLGG 309

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           GA +  V   F II+S S VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 310 GASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLEG 369

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NVD G +LI ESGL +I A +L DA  K V A  G
Sbjct: 370 TNVDAGKKLIRESGLPIIPADNLTDAGIKAVKAANG 405


>gi|323343455|ref|ZP_08083682.1| succinyl-CoA ligase subunit beta [Prevotella oralis ATCC 33269]
 gi|323095274|gb|EFZ37848.1| succinyl-CoA ligase subunit beta [Prevotella oralis ATCC 33269]
          Length = 380

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 168/398 (42%), Positives = 241/398 (60%), Gaps = 19/398 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKA    Y +PV + ++  +V  A +A +TL     V+K+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKAFFADYGLPVDRSILCRTVEEAVTAYRTLGVDRAVIKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +  + V     +ILG T+        G  V+ + V +   I  E Y+
Sbjct: 58  -------GGVKVANGEEEVREYASKILGMTI-------KGFTVDRILVGEAVAIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR S     + S +GGMDIE+VA++ P+KI K+ IDPL+G+T          L   
Sbjct: 104 SILIDRKSKSPLLMLSREGGMDIEQVARETPEKIHKITIDPLVGMTDYLAREAAFKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F NLY+ F +KD SL EINPL++ ++GRL+ +D+K++FD+NALYRH D+ 
Sbjct: 164 MTEVKQAVPIFKNLYRLFTEKDASLAEINPLVLTEDGRLKAIDAKMTFDNNALYRHEDVF 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L + +EE+ +E  AK    SYI L G+IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 KLFEPTEEERKEQAAKDKGFSYINLGGSIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  V+ +LINIFGGI RCD + KG++ A +++   IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVRVVLINIFGGITRCDDVAKGLIEAFEQLNTKIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N   G  L+   G        + DA  K V   + +
Sbjct: 344 GTNEVEGRELL--HGTRFTVGTSMADAGHKAVELARSL 379


>gi|325854971|ref|ZP_08171687.1| succinate-CoA ligase, beta subunit [Prevotella denticola CRIS
           18C-A]
 gi|327313355|ref|YP_004328792.1| succinate-CoA ligase subunit beta [Prevotella denticola F0289]
 gi|325483949|gb|EGC86889.1| succinate-CoA ligase, beta subunit [Prevotella denticola CRIS
           18C-A]
 gi|326944255|gb|AEA20140.1| succinate-CoA ligase, beta subunit [Prevotella denticola F0289]
          Length = 379

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 169/396 (42%), Positives = 237/396 (59%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + +V  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIVCKTPEEAVAAYKQLGVEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGNNEAEIRQHAEAILGMNI-------KGFVVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP++G++          L   
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVVGMSDYLAREAAFKLFDN 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F N+Y+ F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MAQVKQAVPIFKNIYRLFTEKDASLAEINPLVMLKDGTLKAIDAKMTFDDNALFRHPDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + + E+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTAEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K +K +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDGHVKVVLINIFGGITRCDDVANGLLEAFKVIKTDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++   G +      + DA  K V   K
Sbjct: 344 GTNEAEGRAILE--GTHFTVGTSMADAGHKAVELSK 377


>gi|300776162|ref|ZP_07086021.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC
           35910]
 gi|300505295|gb|EFK36434.1| succinate--CoA ligase (ADP-forming) [Chryseobacterium gleum ATCC
           35910]
          Length = 396

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 171/405 (42%), Positives = 246/405 (60%), Gaps = 20/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ+K +L KY V + +G V ++V  A +A + L        +VVK+QIHA     
Sbjct: 1   MNLHEYQSKEILSKYGVAIQRGFVANNVDEAVAAAEKLTAETGAQGWVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-- 114
                      GGV+   ++  +  + + I+G  L+T QT   G +VN V + +      
Sbjct: 56  -----GGRGKGGGVKFSPNMDKLKENAQNIIGMQLVTPQTSAEGKKVNSVLIAEDVYYPG 110

Query: 115 ---LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L+DR  G    + ST+GGMDIE VA+  P  I K +IDP +G+      
Sbjct: 111 ETETKEFYVSILLDRAEGKNTIVYSTEGGMDIEHVAEVTPHLIHKEIIDPALGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+G A  +      +LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLEGNAFKEFVKFIGSLYNAYTGIDASLFEINPVLKTSDNKIIAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           +L+RH D+ ELRD  EED  ++EA +  L+++ LDGN+ CMVNGAGLAMATMDIIKL GG
Sbjct: 231 SLFRHKDLAELRDTREEDPMDVEAGEAGLNFVKLDGNVACMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 NPANFLDVGGTADAQRVQTAFGIILRDPNVKAILINIFGGIVRCDRVAQGVVDAYKAMGS 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           + +PL++RL+G N     +LI ESGL V +AI L++AA K+   +
Sbjct: 351 LPVPLIVRLQGTNAVEAKKLIDESGLPVHSAITLEEAANKVKEVL 395


>gi|328854652|gb|EGG03783.1| hypothetical protein MELLADRAFT_89885 [Melampsora larici-populina
           98AG31]
          Length = 418

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 169/386 (43%), Positives = 240/386 (62%), Gaps = 4/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL +Y +P            A + +K    P+ V+K+Q+ AGGRGKG F 
Sbjct: 27  LSIHEYLSMGLLNEYGIPTPASKAAKDPQEAYNIVKQAGKPM-VIKAQVLAGGRGKGHF- 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E P   KGGV++  S         ++LG  LITKQTG  G   N V + +  +   E Y+
Sbjct: 85  EGPNGLKGGVQMVDSPDQARDFAAQMLGQKLITKQTGAGGRICNAVMLAEKREPSHEYYV 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L DR+    A +AS+QGGM+IEEVA   P  I    ID   G+T      +   L ++
Sbjct: 145 AILNDRSLNGPALVASSQGGMNIEEVAAKDPSAILTYPIDFHNGLTQTQGIEVAKKLGIK 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A     D+F  LYK F DKD + +EINPL   K+G +  +D+K+ FD+NA +R  ++ 
Sbjct: 205 DEAA--AADIFIKLYKLFKDKDATQIEINPLAETKDGAVLCMDAKLGFDENAEFRQAEVF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ED  E+EA ++ L+ I LDGNIGC+VNGAGLAMATMD++KL GG PANFLDVG
Sbjct: 263 KLRDRSQEDPTEVEAAEYGLNLIKLDGNIGCLVNGAGLAMATMDVLKLAGGNPANFLDVG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  AF++ITSD  VK I +NIFGGIMRCDV+ +GI+ A  E+ ++IPL++RL+
Sbjct: 323 GGATAEAVKKAFELITSDKGVKSIFVNIFGGIMRCDVIAEGIIRATNELSLDIPLIVRLQ 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G       +LI ++ + +    +LD+
Sbjct: 383 GTKEKEAKQLIKDAKMKIFAFDELDE 408


>gi|149278396|ref|ZP_01884533.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Pedobacter sp. BAL39]
 gi|149230766|gb|EDM36148.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Pedobacter sp. BAL39]
          Length = 396

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 179/405 (44%), Positives = 242/405 (59%), Gaps = 20/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V  +V  A  A K +         V+K+QIHA     
Sbjct: 1   MNIHEYQGKEILKSFGVAVQEGIVAETVDQAVEAAKKMKTDFNSDWVVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  +L  V      ILG  L+T QTGP G +VN V V       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKERATAILGMQLVTPQTGPEGKKVNKVLVAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+      
Sbjct: 111 ASETKEFYVSVLLNRANGRNIIMYSTEGGMDIEEVAEKTPHLIFKEEIDPKVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D S+ EINP++   + ++  +D+K+  D+N
Sbjct: 171 KVAFNLGLSGAAFKEMVKFVTALYKAYDSTDSSMFEINPVLKTSDDKIIAVDAKVDLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RD  EED  ++EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALYRHPDYAAMRDKLEEDPTDVEASESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V A F II  D +VK ILINIFGGI+RCD + +G++ A KE+  
Sbjct: 291 EPANFLDVGGTANAQTVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYKEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P++ RL+G N     +LI +SGL V +AI L DAA  +   +
Sbjct: 351 IPVPIICRLQGTNAAEAKQLIDDSGLKVYSAIALKDAANLVTEVL 395


>gi|285017465|ref|YP_003375176.1| succinyl-CoA synthetase beta chain (scs-beta) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283472683|emb|CBA15188.1| hypothetical succinyl-coa synthetase beta chain (scs-beta) protein
           [Xanthomonas albilineans]
          Length = 387

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 178/387 (45%), Positives = 249/387 (64%), Gaps = 10/387 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQAK L   Y +PV  G + S+   A  A   L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQAKQLFANYGIPVPAGRIASTPEEAVEAANALGDGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T Q+      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMATYQSAGVALPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    + +I S++GG+DIEEVA   P+KI  L++D   GV       +   + L 
Sbjct: 111 SLLVDRDQKSITYIVSSEGGVDIEEVAATTPEKIHTLVVDYAEGVQPYQGREIGFKMGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   LY  F DKD+SL+E+NPL I+ +  L  LD K++ DDNA +R  D+ 
Sbjct: 171 AKQANQLANIMGGLYALFNDKDLSLVELNPLAILDDQNLYALDGKVNSDDNATFRRKDLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD ++ED  E++A +H+L+Y+ +DGNIGCMVNGAGLAMATMD+I L GGAPANFLDVG
Sbjct: 231 AMRDTTQEDETEVKASEHDLNYVTMDGNIGCMVNGAGLAMATMDVIALNGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  AFK+I S   VK I +NIFGGI+RCD++ +GI++AVKEV + +P+V+RLE
Sbjct: 291 GGATKERVTEAFKLILSSDKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVDVKVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDA 387
           G NV+ G  L+A+SGL +  A D++D 
Sbjct: 351 GTNVEAGKTLLADSGLAITPADDINDG 377


>gi|91095067|ref|XP_972655.1| PREDICTED: similar to succinyl-coa synthetase beta chain [Tribolium
           castaneum]
 gi|270014754|gb|EFA11202.1| hypothetical protein TcasGA2_TC005166 [Tribolium castaneum]
          Length = 414

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 178/393 (45%), Positives = 242/393 (61%), Gaps = 5/393 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LLRK  V V    ++       S         YV+K+QI AGGRGKG F 
Sbjct: 25  LNLLEYQSKHLLRKNGVAVQDFCMVD--DKGCSEFDKFNVKEYVIKAQILAGGRGKGHF- 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV V      V   ++++LG  LITKQT   G  V  +   +  +I RE Y+
Sbjct: 82  --TNGFKGGVHVTEKRNEVDDIVKKMLGHRLITKQTPKDGIEVKKIMFAESVNIQRETYV 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GG+DIE VA+  P  I  + ID   GVT      + + LE +
Sbjct: 140 CILMDRQKNGPVLIASPAGGVDIEAVAEKTPHLIKNIPIDIHKGVTDSMANEVAEFLEFK 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +         L++ F   D + LEINPL+   N ++  +D+KI+FDDNA +R  DI 
Sbjct: 200 GPLKGLAAAELKKLWQFFLAVDATQLEINPLVETDNNKVIAVDAKINFDDNAQFRQKDIF 259

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L DV+E D RE+EA ++NL+YI + GNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 260 ALEDVTESDPREVEAAKYNLNYIGMTGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 319

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +++V AAF I+TSD +VK IL+N+FGGI+ C  +  GI+ A+K +K+ +PL++RLE
Sbjct: 320 GSVREEQVKAAFNILTSDKNVKCILVNVFGGIVNCATIANGIVGAMKAMKLEVPLIVRLE 379

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N     R+I +SG+N+ TA +LDDAA+K V 
Sbjct: 380 GTNAAEARRIIKDSGMNIQTAENLDDAAKKAVQ 412


>gi|150024993|ref|YP_001295819.1| succinyl-CoA synthetase, beta subunit [Flavobacterium psychrophilum
           JIP02/86]
 gi|189030241|sp|A6GY30|SUCC_FLAPJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|149771534|emb|CAL43003.1| Succinyl-CoA synthetase, beta subunit [Flavobacterium psychrophilum
           JIP02/86]
          Length = 398

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 165/406 (40%), Positives = 243/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  Y V + +G+V ++   A +A K L        YVVK+Q+HA     
Sbjct: 1   MNIHEYQGKEILASYGVRIQRGIVANNPVEAVAAAKQLTTETGTSWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  LIT QT   G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQQVEEISEQIIGMQLITPQTSAEGKKVHKVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R++G    + ST+GGMDIEEVA   P  I    IDP +G+ +    
Sbjct: 111 ESETSEFYISVLLNRSTGRNMIVYSTEGGMDIEEVAAHTPHLIHNEEIDPSVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LY A+   D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 171 RIAFNLGLSGNAFKEMVKFIDSLYNAYIGSDASMFEINPVLKTSDDKIMAVDAKVNIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     ++RD+ EE+  E+EAK+  L+Y+ LDG +GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALYRQPKYADMRDIREENPIEVEAKEVGLNYVDLDGTVGCMVNGAGLAMATMDLIKYAGF 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVETAFRIILKDENVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N +I   LI  SG+ +++A+   +AA ++  A+
Sbjct: 351 AIKVPIIVRLQGTNAEIAKELIDNSGMPILSAVQFQEAADQVKAAL 396


>gi|74316823|ref|YP_314563.1| succinyl-CoA synthetase subunit beta [Thiobacillus denitrificans
           ATCC 25259]
 gi|123612162|sp|Q3SKM1|SUCC_THIDA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|74056318|gb|AAZ96758.1| succinyl-CoA synthase, beta subunit [Thiobacillus denitrificans
           ATCC 25259]
          Length = 386

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 202/395 (51%), Positives = 262/395 (66%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +LR  N+   +G+  +S  AA  A + L G  +VVK+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKQVLRSSNLNTPRGIAATSADAAADAARELGGEAWVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S+ +V S    +LG  L+T Q  P G  V+ V VE+   I RELYL
Sbjct: 58  -------GGVKVVTSIDAVRSVAAALLGKPLVTVQNAPDGQPVHTVLVEETLPIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR S  VA +AS  GGMDIE+VA   P+K+   + DPL+GV      +L   L L 
Sbjct: 111 SLLVDRASERVAVVASAAGGMDIEQVAHATPEKVLTEICDPLLGVQDFQCRALAFALGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   L P LY+ F   D+SLLEINPL++  + R+  LD K+S DDNALYR   + 
Sbjct: 171 GDAYKDFCRLLPQLYRVFVANDLSLLEINPLVVTTDNRVLPLDCKMSVDDNALYRRKALA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD S+ D++E  A   N++Y+AL GNIGCMVNGAGLAMATMD+I+L GGAPANFLDVG
Sbjct: 231 DLRDDSQIDAKEAAANAANVNYVALAGNIGCMVNGAGLAMATMDLIQLEGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + VA  FKII  D +VK +LINIFGGI+RCDV+ +GI+ AV+EV + +P+++RLE
Sbjct: 291 GGATPETVAQGFKIILLDPNVKAVLINIFGGIVRCDVIAEGIIQAVREVGVEVPVIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G  L+AESGL ++ A  L  AA+  V   
Sbjct: 351 GTNAELGRTLLAESGLAIVAAESLTQAAKFAVEKA 385


>gi|126661846|ref|ZP_01732845.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteria bacterium BAL38]
 gi|126625225|gb|EAZ95914.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteria bacterium BAL38]
          Length = 397

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 169/406 (41%), Positives = 242/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  Y V V +G+V ++   A +A K L        YVVK+Q+HA     
Sbjct: 1   MNIHEYQGKEILASYGVRVQRGIVANNPVEAVAAAKQLTTETGTSWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-- 114
                      GGV++  +L  V     +I+G  LIT QT P G +V+ V + +      
Sbjct: 56  -----GGRGKGGGVKLAKNLDQVTEISEQIIGMQLITPQTPPEGKKVHKVLIAEDVYYPG 110

Query: 115 ---LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP  G+ +    
Sbjct: 111 ETETSEFYVSVLLNRATGRNMIMYSTEGGMDIEEVAEHTPHLIFTEEIDPAYGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A  +       LYKA+   D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGEAFKEMVKFIDALYKAYIGSDSSMFEINPVLKTSDNKILAVDAKVNIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+R     E+RDV EE+  E+EAK+  L+Y+ LDG +GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALFRQAKYAEMRDVREENPIEVEAKEVGLNYVDLDGTVGCMVNGAGLAMATMDLIKYAGF 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVETAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N  I   LI  SG+ +++A+   +AA ++  A+
Sbjct: 351 AIKVPIIVRLQGTNAVIAKELIDNSGMPILSAVQFQEAADQVKAAL 396


>gi|156392365|ref|XP_001636019.1| predicted protein [Nematostella vectensis]
 gi|156223118|gb|EDO43956.1| predicted protein [Nematostella vectensis]
          Length = 435

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 176/392 (44%), Positives = 245/392 (62%), Gaps = 3/392 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L++   + V + +V  +   +    K L    YV+K+QI AGGRGKG F 
Sbjct: 42  LNLQEYQSKKLMQDNGLNVQRFIVAENPEESVRLSKKLNAAEYVIKAQILAGGRGKGTFD 101

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +   GGV +      V     ++ G  L TKQT P G  VN V V +  DI RE YL
Sbjct: 102 ---SGLNGGVHLTKLADEVGYFTAKMFGYRLKTKQTPPEGVMVNKVMVAEAYDIERETYL 158

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR       +AS +GGMDIEEVAK  P+ I+K+ +D   G+  +D + L + LE +
Sbjct: 159 AILMDREFMGPVIVASPKGGMDIEEVAKTTPEYIYKVPVDITKGLQDKDASWLAEKLEFK 218

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      +    LY  F   D + +EINP     +G++   D+K +FDDNA YR   I 
Sbjct: 219 GELHKQATEQIKRLYDVFLKVDATQVEINPFGETPDGKVVCFDAKFNFDDNAKYRQKAIF 278

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D SE D RE+EA + +LSYIA+DGNI C+VNGAGLAMATMDIIKL+GG P+NFLD+G
Sbjct: 279 DLDDKSESDPREVEAAEFDLSYIAMDGNIACLVNGAGLAMATMDIIKLHGGEPSNFLDLG 338

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  ++ V  A KI++ D  VK IL+NIFGGI+ C V+  GI  A +++K+++P+V+RLE
Sbjct: 339 GGIKEEGVLHALKIVSKDPRVKVILVNIFGGIVDCSVVASGITKAYEKLKLDVPIVVRLE 398

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G NVD    ++ ESG+ +I A D+DDAA K V
Sbjct: 399 GNNVDKAQHILEESGMPLIAADDMDDAAIKAV 430


>gi|299139179|ref|ZP_07032355.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8]
 gi|298598859|gb|EFI55021.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8]
          Length = 392

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 193/401 (48%), Positives = 261/401 (65%), Gaps = 13/401 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LRKY V V  G + +++  A++A K L      + VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRKYGVAVPNGEMATTIEEADAAAKQLFSAGNAVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  SL+      + ILG  L+T QTGP G +V  + VE G+ I RE
Sbjct: 55  ----GGRGKGGGVKLARSLEEAAVYSKSILGMQLVTHQTGPAGQKVQRLLVEAGSAIARE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL L++DR S  V F+AS  GGM+IEEVA + P  IFK  ++P IG+      +L   L
Sbjct: 111 LYLGLVLDRASSKVVFMASQAGGMEIEEVAHENPDAIFKEYVNPAIGLQPYQARALAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+     +       LYKAF + D +L+EINP I  K+G+L  LD KI+FDDNA++RH 
Sbjct: 171 GLEPAQIGEAVRFMLGLYKAFIETDSTLMEINPFITTKDGKLLALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD+SEED  E+EA ++ L+YI LDGNI CMVNGAGLAMATMDII+  GG+ ANFL
Sbjct: 231 DLKELRDLSEEDPLEVEASKYALNYIKLDGNIACMVNGAGLAMATMDIIQYAGGSAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q+++  AF I+ SD +VK I INIFGGI+R DVL   +++A K++ + +P+++
Sbjct: 291 DVGGGANQEQIENAFGILLSDPNVKAIFINIFGGILRVDVLATAVVAAAKKLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           RLEG NV+ G +++AESGL       + +AA   V A KGV
Sbjct: 351 RLEGTNVEEGRKILAESGLKFEVGATMKEAADLAVAAAKGV 391


>gi|332022240|gb|EGI62555.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Acromyrmex echinatior]
          Length = 441

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 168/393 (42%), Positives = 238/393 (60%), Gaps = 3/393 (0%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+ A  LL+K  +P     V  +   A +  K L     V+K+Q+ AGGR KG FK  
Sbjct: 27  VHEHMAYTLLKKAGIPTPPFWVAKTSDEAATLAKNLNTKDLVLKAQVLAGGRAKGHFKSS 86

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV +  ++K V      ++ + L+T+QTGPTG   N V V       +E Y+++
Sbjct: 87  NVS---GVVMCDTIKQVKELADSMIDNVLVTRQTGPTGKICNSVMVTTRMFPRKEYYMAV 143

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +++RT      I S QGG++IE+VA   P+ I  + ID   G+T E   ++ D L L G 
Sbjct: 144 MLERTFNGPVIIVSKQGGVNIEDVAATNPEAIVYVPIDVKKGLTPEQANNIADKLGLVGA 203

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
           ++     +  NLY  F +KD  LLEINP      G    LD K  FDD+A +R  ++  L
Sbjct: 204 SKEIASLVASNLYDLFVEKDALLLEINPFAEDICGEYYALDCKCKFDDSADFRQKELFAL 263

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D ++ D +E+EA+++NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVGG 
Sbjct: 264 KDTTQMDPKEVEAEKYNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGMPANFLDVGGT 323

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + V   FKI+++D +V+ IL+NIFGGI +CD++ +GI+ A K++ IN+P++ RL+G 
Sbjct: 324 ATVETVTEGFKILSTDPNVEAILVNIFGGITKCDIIAQGIIDATKQLNINVPIITRLQGN 383

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NVD   +LI ++ L VI       AA+  V   
Sbjct: 384 NVDKAKQLILDAKLKVIPVNSFIQAAKTSVKLA 416


>gi|255532906|ref|YP_003093278.1| succinyl-CoA synthetase subunit beta [Pedobacter heparinus DSM
           2366]
 gi|255345890|gb|ACU05216.1| succinyl-CoA synthetase, beta subunit [Pedobacter heparinus DSM
           2366]
          Length = 396

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 173/397 (43%), Positives = 240/397 (60%), Gaps = 20/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQ K +L+ + V V +G+V  +V  A  A K +         V+K+QIHA     
Sbjct: 1   MNIHEYQGKEILKSFGVAVQEGIVADTVEQAVEAAKKMKTDYNSDWVVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE-----DG 111
                      GGV++  +L  V      ILG  L+T QTGP G +VN + V       G
Sbjct: 56  -----GGRGKGGGVKLAKNLDEVKERATAILGMQLVTPQTGPEGKKVNKILVAQDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IFK  IDP +G+ +    
Sbjct: 111 ASETKEFYISVLLNRGNGRNIIMYSTEGGMDIEEVAEHTPHLIFKEEIDPKVGLQAFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+   D ++ EINP++   + ++  +D+K+  D+N
Sbjct: 171 KIAFNLGLSGAAFKEMVKFVTALYKAYDSTDSAMFEINPVLKTSDDKIIAVDAKVDLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD  EED  ++EA + NL+Y+ LDGN+GCMVNGAGLAMATMDIIK+ GG
Sbjct: 231 ALFRHPDYAAMRDKLEEDPTDVEASESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG A+   V A F II  D +VK ILINIFGGI+RCD + +G++ A  E+  
Sbjct: 291 EPANFLDVGGTANAQTVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYNEIGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           + +P++ RL+G N +   +LI ESGL V +AI L +A
Sbjct: 351 VPVPIICRLQGTNAEEAKKLIDESGLKVYSAIALKEA 387


>gi|157130278|ref|XP_001661867.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108871927|gb|EAT36152.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 449

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 176/401 (43%), Positives = 243/401 (60%), Gaps = 7/401 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ +   L +  +P  K  V +S   AE   K L     V+K+Q+ AGGRGKG FK
Sbjct: 33  LNVQEHVSYTFLNEAGIPTPKFGVANSAQDAEKIAKGLNTKNLVLKAQVLAGGRGKGTFK 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S +       +++   L+TKQTG  G   N V V +     RE Y 
Sbjct: 93  N---GLKGGVRVVFSPQEARDISGKMIKQLLVTKQTGAAGRICNSVMVAERKFPRREFYF 149

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS+QGG++IEEVA + P  I    ID   G+      ++   + L+
Sbjct: 150 AVMMERAFNGPVLIASSQGGVNIEEVAAENPDAIVYEPIDIKAGLQKAQALAIAKKVGLE 209

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK---NGRLRVLDSKISFDDNALYRHL 237
             A  +   +  N+Y  F  KD  L+EINP        + +   LD+K+ FDDNA +R  
Sbjct: 210 DHA-EETAKMLLNMYDLFVKKDALLIEINPYAEDAGETSSQYFALDAKMRFDDNAEFRQK 268

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D+   RD+S+EDS+E+EA + +L+YIALDG+IGC+VNGAGLAMATMDIIKL+GG PANFL
Sbjct: 269 DLFAKRDLSQEDSKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFL 328

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA    V  AF+IITSD  V  IL+NIFGGIMRCDV+ +GI+ A KE+ I +P+++
Sbjct: 329 DVGGGASVKAVKEAFRIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIV 388

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           RL+G NV+    LI +S L ++   DLD+AA   VH  + V
Sbjct: 389 RLQGTNVNEAKELIKKSKLRILPKDDLDEAAMLSVHLAQIV 429


>gi|2351687|gb|AAB68610.1| adhesin protein AP51-2 [Trichomonas vaginalis]
          Length = 405

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 176/396 (44%), Positives = 251/396 (63%), Gaps = 2/396 (0%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+Q+K +  K+NV     +V  +   A +A K +  P  V+K+Q++ GGRGKG +KE
Sbjct: 8   NILEWQSKEICAKFNVAAGINLVARTPEEAAAAFKKMGLPAAVIKAQVYCGGRGKGHWKE 67

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                K GV    S        +E+LG  L+TKQTG  G     V + D  ++ RELY +
Sbjct: 68  --TGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGADGLLCQAVMLSDPVEVKRELYFA 125

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     IAST+GG++IEEVA  +P+KI K  +D + G+T +   ++   L L G
Sbjct: 126 ILLDRQTQSPVVIASTEGGVEIEEVAAKHPEKILKFQLDGVEGITRDVAVNISKQLGLTG 185

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +A  +G +    L+K F   D + +E+NPL    +GR+  +DSK +FDD+A YR   I  
Sbjct: 186 KAYENGIEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQIFG 245

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD+ + +  EI A+++ L+Y+ LDGN+ C+VNGAGLAMATMD+I+L GG PANFLD+GG
Sbjct: 246 YRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIQLAGGDPANFLDLGG 305

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           GA +  V   F II+S   VK IL+NIFGGI+RCD++  G+++A K+V + +PLV+RLEG
Sbjct: 306 GASEAAVTEGFTIISSQPHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRLEG 365

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            NVD G +LI ESGL +I A +L DA  K V A  G
Sbjct: 366 TNVDAGKKLIRESGLPIIPADNLTDAGIKAVKAANG 401


>gi|59808474|gb|AAH89863.1| Suclg2 protein [Rattus norvegicus]
          Length = 387

 Score =  424 bits (1091), Expect = e-117,   Method: Composition-based stats.
 Identities = 164/378 (43%), Positives = 226/378 (59%), Gaps = 3/378 (0%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ ++ V V +  V S+   A+ A K L     V+K+QI AGGRGKG F    +  KG
Sbjct: 1   KKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFD---SGLKG 57

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+ 
Sbjct: 58  GVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSH 117

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +    
Sbjct: 118 NGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAA 177

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
           D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE 
Sbjct: 178 DQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSEN 237

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V
Sbjct: 238 EPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQV 297

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
             AFK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    
Sbjct: 298 YQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLEGTNVQEAQ 357

Query: 369 RLIAESGLNVITAIDLDD 386
            ++  SGL + +A+DL+D
Sbjct: 358 NILKSSGLPITSAVDLED 375


>gi|319951907|ref|YP_004163174.1| succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga
           algicola DSM 14237]
 gi|319420567|gb|ADV47676.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga
           algicola DSM 14237]
          Length = 396

 Score =  424 bits (1091), Expect = e-117,   Method: Composition-based stats.
 Identities = 177/407 (43%), Positives = 250/407 (61%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHTAKEAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V     +I+G TLIT QT   G +V+ + V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVEEIAGQIIGMTLITPQTSAEGKKVHQILVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A   +E Y+S+L++R +G    + ST+GGMDIEEVA++ P  IF   IDP  G+      
Sbjct: 111 ASETKEFYMSVLLNRGTGRNMIMYSTEGGMDIEEVAENTPHLIFTEEIDPGTGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D S+ EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGTAFKEMTKFVASLYKAYDESDSSMFEINPVLKTSDDKIMAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+R     E+RD+ EE++ E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRRKQYAEMRDLREENAIEVEAGALGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V AAFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVEAAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           IN+P+++RL+G N D+   LI  SGL+V +A+   +AA K V AV G
Sbjct: 351 INVPIIVRLQGTNADLAKELIDNSGLDVQSAVQFQEAADK-VKAVLG 396


>gi|285808254|gb|ADC35787.1| succinyl-CoA synthetase (ADP-forming) beta subunit [uncultured
           bacterium 282]
          Length = 392

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 184/389 (47%), Positives = 252/389 (64%), Gaps = 13/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LRKY VPV  G ++ ++  A+ A K L      + VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRKYGVPVPGGEMVQTLEEADRAAKDLFDKGNAVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  SL    +  + ILG  L+T QTGP G +V  + +E+G+ I RE
Sbjct: 55  ----GGRGKGGGVKVVKSLADASTASKAILGMQLVTHQTGPQGQKVQRLLIEEGSAIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL +++DR +  + F+AS  GGM+IEEVA   P+KI+K  IDP +G+       L   L
Sbjct: 111 LYLGIVLDRAAARLVFMASQAGGMEIEEVAHATPEKIYKEYIDPAVGLQPYQARKLAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L+     D       LYKAF + D +L+EINP I  K+ +L  LD KI+FDDNA++RH 
Sbjct: 171 GLKSTQVNDAVKFMTGLYKAFVETDSTLMEINPFITTKDDKLLALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD+SEED  E+EA +  L+YI LDG+I CMVNGAGLAMATMDII+  GG  ANFL
Sbjct: 231 DLKELRDLSEEDPLEVEASKFALNYIKLDGSIACMVNGAGLAMATMDIIEYAGGKAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q+++  AF I+ SD +VK I INIFGGI+R DVL   +++A K++ + +P+++
Sbjct: 291 DVGGGANQEQIENAFGILLSDPNVKAIFINIFGGILRVDVLATAVVAAAKKLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDD 386
           RLEG NV+ G +++AESGL       + +
Sbjct: 351 RLEGTNVEEGRKILAESGLKFEVGATMKE 379


>gi|237829849|ref|XP_002364222.1| succinyl-CoA ligase, putative [Toxoplasma gondii ME49]
 gi|92399541|gb|ABE76512.1| mitochondrial putative ATP-specific succinyl-CoA synthetase beta
           subunit [Toxoplasma gondii]
 gi|211961886|gb|EEA97081.1| succinyl-CoA ligase, putative [Toxoplasma gondii ME49]
 gi|221487295|gb|EEE25527.1| succinyl-CoA ligase, putative [Toxoplasma gondii GT1]
 gi|221507087|gb|EEE32691.1| succinyl-CoA ligase, putative [Toxoplasma gondii VEG]
          Length = 498

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 174/414 (42%), Positives = 250/414 (60%), Gaps = 18/414 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--------PGPL-YVVKSQIHA 51
           +N+HEYQ+  +++++++   K  V S+   AE    T           P+ +VVK+Q+ A
Sbjct: 72  LNLHEYQSMRIMKEFHITTPKFAVASTAKEAEQEAATFLSESPSGDGEPVDFVVKAQVLA 131

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           GGRG G F+E     +GGV+V  S + V     ++LG TL+TKQTG  G   N V V + 
Sbjct: 132 GGRGLGFFRE--NGYQGGVQVCESPREVGIVAEKMLGKTLVTKQTGKEGKLCNKVLVTER 189

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
             I +E Y+++L+DR +G    I S +GG  IE++A +YP+ I K+ ID   G++   + 
Sbjct: 190 FFIRKEKYVAILMDRGAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLR 249

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              ++L   G            LY+ F  KD + +E+NPL+   +GR+ V D+K++FDDN
Sbjct: 250 EFAELLGFSGDRLEAACQCIRGLYELFRSKDCTQIEVNPLVETHDGRVLVCDAKLNFDDN 309

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +R  DI   RD S+ED RE+ A   +L+YI L+G+IGCMVNGAGLAMATMDII L+GG
Sbjct: 310 AGFRQKDIFSQRDYSQEDPREVAADAADLNYIGLEGSIGCMVNGAGLAMATMDIIHLHGG 369

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           +PANFLDVGGGADQ ++  A KII  D     +L+NIFGGIMRCDV+ KG+++A KEV  
Sbjct: 370 SPANFLDVGGGADQHQIIEALKIIQQDKRANCVLVNIFGGIMRCDVIAKGLVAAAKEVGF 429

Query: 352 NIPLVMRLEGANVDIGNRLIAE-------SGLNVITAIDLDDAAQKIVHAVKGV 398
           + P+V+RLEG N +    ++ +       S L ++   D D AAQ  V     V
Sbjct: 430 DKPVVLRLEGTNKEAAKEVLKDVLTDPAYSALQLLQEDDFDKAAQLAVKVASVV 483


>gi|254457833|ref|ZP_05071260.1| succinyl-coa synthetase beta chain [Campylobacterales bacterium GD
           1]
 gi|207085226|gb|EDZ62511.1| succinyl-coa synthetase beta chain [Campylobacterales bacterium GD
           1]
          Length = 390

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 175/389 (44%), Positives = 241/389 (61%), Gaps = 12/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAK +  KYN+P  KG+++ SV AA  A + L GP++VVK+QIHA         
Sbjct: 1   MNIHEYQAKQIFAKYNIPTPKGIMVESVKAAIEAAEVLGGPIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S+  V S   EILG TL+T QT   G  V  +Y+EDGADI  ELYL
Sbjct: 52  -GGRGLGGGVKLAKSIDEVESLATEILGMTLVTHQTTAEGKLVQKLYIEDGADIKDELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR S M   +AST+GGMDIE VA++ P+KI  + +DP IG        L   L + 
Sbjct: 111 SVVLDRKSEMPLIMASTEGGMDIETVAENTPEKIITIPVDPAIGFQGFHGRQLAFGLGIT 170

Query: 181 GQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            +  + +       L++ + + D  ++EINPL+    G    LD K+ FD++AL R  +I
Sbjct: 171 DKIEQKNIIKFAEKLFRLYMENDAEMIEINPLVKTGKGVFLALDGKMGFDNSALGRQPEI 230

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             +RD++EED+ EIEA ++ LSY+ALDG IGCMVNGAGLAM TMD I   GG PANFLDV
Sbjct: 231 AAMRDLTEEDADEIEAAKYGLSYVALDGEIGCMVNGAGLAMGTMDTINYMGGTPANFLDV 290

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A+ + VA  F+II  +  VK I +NIFGGI+RCD +  GI+ A K   +N+P+++RL
Sbjct: 291 GGSANAETVAKGFEIILKNPRVKAIFVNIFGGIVRCDRIANGIIEATKLTDVNVPVIVRL 350

Query: 360 EGANVDIGNRLIAESGLN-VITAIDLDDA 387
           +G N      ++  + +  +I   DL D 
Sbjct: 351 DGTNAPEAAEILKNANIPNLIVGNDLGDG 379


>gi|146328975|ref|YP_001210178.1| succinyl-CoA synthetase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|189029906|sp|A5EX54|SUCC_DICNV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146232445|gb|ABQ13423.1| succinyl-CoA synthetase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 386

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 175/386 (45%), Positives = 249/386 (64%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAKALLR   +   +G++I +   A+ A + L G  +VVK+QIH+GGRGK    
Sbjct: 1   MNLHEYQAKALLRAAGIKTPRGIIIKNSVEAKEAAQQLGGNRWVVKAQIHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +L  V      +LGS L T+Q+   G  +N V +E+    +   YL
Sbjct: 58  -------GGIKTAQTLDEVHHISAAMLGSRLKTEQSSADGLPINEVLIEEECRAIATYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L +DR    + FIAS  GG +IE VA+  P+ I    ++P IG +    A +   L+L 
Sbjct: 111 ALTLDRPRQQIVFIASMAGGTEIETVAETNPEAIIYAGVNPAIGFSPYLSARVGGALQLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              ++    L   LY+ F D D++LLE+NPLII ++     LD+KIS DDNAL+RH ++ 
Sbjct: 171 KSYQLPLTKLMNRLYQLFIDNDLTLLELNPLIITEDHEFLPLDAKISIDDNALFRHQELV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD ++ED RE +A++  L+Y+ LDG IGC+ NGAGLAMATMDIIKLYGG PANFLDVG
Sbjct: 231 DLRDTTQEDHRETQAQELQLNYVPLDGTIGCIANGAGLAMATMDIIKLYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFK+I + S +K IL+NIFGGI+RCD++  GI+ A KE+ + IP+++RL+
Sbjct: 291 GDATSERVKQAFKLILTSSRIKSILVNIFGGIVRCDLIADGIIQAAKEIDLKIPVIVRLQ 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NVD+G +++ E  LN+  A DL D
Sbjct: 351 GNNVDLGRKMLDECPLNLQAADDLID 376


>gi|298208275|ref|YP_003716454.1| Succinyl-CoA synthetase, beta subunit [Croceibacter atlanticus
           HTCC2559]
 gi|83848196|gb|EAP86066.1| Succinyl-CoA synthetase, beta subunit [Croceibacter atlanticus
           HTCC2559]
          Length = 397

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 171/406 (42%), Positives = 246/406 (60%), Gaps = 22/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVEIQRGIVAQTPQEAVEAAKKLTEQTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S   +I+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVESISNDIIGMNLVTPQTSKEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+ +L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMGVLLNRATGKNMVMYSTEGGMDIETVAEETPHLIFTEEIDPATGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L+GQA          LYKA+ + D S+ EINP++   + ++  +D+K++ D+N
Sbjct: 171 KIAFNLGLKGQAFKQMTKFVTALYKAYMESDSSMFEINPVLKTSDDKIIAVDAKVTLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D   +RD+ EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAAMRDIREENPTEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
           +PANFLDVGG AD  +V AAF++I  D  VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 SPANFLDVGGTADAARVEAAFRLILKDPEVKAILINIFGGIVRCDRVAQGVVDAYKAMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            + +P+++RL+G N DI   LI  SGL V +AI+  +AA K V AV
Sbjct: 351 AVKVPIIVRLQGTNADIAKELIDNSGLPVQSAIEFKEAADK-VQAV 395


>gi|125979431|ref|XP_001353748.1| GA10444 [Drosophila pseudoobscura pseudoobscura]
 gi|54640731|gb|EAL29482.1| GA10444 [Drosophila pseudoobscura pseudoobscura]
          Length = 422

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 183/393 (46%), Positives = 257/393 (65%), Gaps = 6/393 (1%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+Q+K LL+KY V + +  V+ + ++    +KT   P YVVK+QI AGGRGKG F     
Sbjct: 33  EFQSKDLLQKYGVAIQQFKVLDNSNSDAEIVKTFECPEYVVKAQILAGGRGKGTFDN--- 89

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             KGGV + S+   V+S  ++++G  LITKQT  +G  VN V V    +I RE YL +L+
Sbjct: 90  GFKGGVHITSNKSDVLSLSKQMIGHRLITKQTPKSGILVNKVMVARSVNITRETYLCILL 149

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR       IAS  GGMDIE VA++ P+K+  + +D    +    +  +   LE +G   
Sbjct: 150 DREHNGPVLIASPAGGMDIEAVAEETPEKLLTVPLDIGKPIPEATLIKVAKFLEFKGDTV 209

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI  + D
Sbjct: 210 QRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFAM-D 268

Query: 245 VSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           ++EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDII+L GG+PANFLDVGGG
Sbjct: 269 ITEEEADPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIQLNGGSPANFLDVGGG 328

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
            ++ +VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+RLEG 
Sbjct: 329 VNEAQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVRLEGT 388

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NV+    ++  SGL + TA DLDDAAQK V A+
Sbjct: 389 NVEKAREILKNSGLPIQTASDLDDAAQKSVAAL 421


>gi|17567829|ref|NP_509821.1| hypothetical protein F47B10.1 [Caenorhabditis elegans]
 gi|1710875|sp|P53588|SUCB1_CAEEL RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit
           beta, mitochondrial; AltName: Full=ATP-specific
           succinyl-CoA synthetase subunit beta; AltName:
           Full=Succinyl-CoA synthetase beta-A chain;
           Short=SCS-betaA; Flags: Precursor
 gi|3877283|emb|CAA91981.1| C. elegans protein F47B10.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 435

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 170/394 (43%), Positives = 234/394 (59%), Gaps = 4/394 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    +L+ Y + V    V      A S  K + G  YVVK+Q+ AGGRGKGRF   
Sbjct: 26  LHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRIGGKDYVVKAQVLAGGRGKGRF--- 82

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +  +GGV++  +   V      ++G+ LITKQT   G +   V V       RE Y S+
Sbjct: 83  SSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEEVMVCKRLFTRREYYFSI 142

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +DR +     IAS+QGG++IEEVA   P  I K+ ID  +G+T E    +   +     
Sbjct: 143 TLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKD 202

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
                 ++   LY+ F   D +L+EINP+    NG +  +D K+  D NA +R   + +L
Sbjct: 203 CEQQASEIIEKLYQMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFRQAKLFDL 262

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D  +ED  EI A   NL+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGGG
Sbjct: 263 KDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGG 322

Query: 303 ADQDKVAAAFKIITSD-SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           A  ++V  AFKIIT+D   V  IL+NIFGGIMRCDV+ +GI+ A +E+ + IP+V+RL+G
Sbjct: 323 ATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIPIVVRLQG 382

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             V+    LIA S L ++   +LD+AA+ +V   
Sbjct: 383 TKVEDAKALIATSQLRILPCDNLDEAAKMVVKLS 416


>gi|91215971|ref|ZP_01252940.1| succinyl-CoA synthetase, beta subunit [Psychroflexus torquis ATCC
           700755]
 gi|91185948|gb|EAS72322.1| succinyl-CoA synthetase, beta subunit [Psychroflexus torquis ATCC
           700755]
          Length = 397

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 172/402 (42%), Positives = 245/402 (60%), Gaps = 21/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + KG++  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVGIQKGILSKTPKEAVEAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGVR+  +LK V     EILG  L+T QT   G  V+ V + +     G
Sbjct: 56  -----GGRGKGGGVRLAKNLKEVEQIAEEILGMHLVTPQTSKEGKEVHQVLITEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +   E Y+S+L++R +G    + S +GG+DIE VA++ P+KIF   IDP  G+      
Sbjct: 111 DNEPEEYYMSVLLNRATGRNMIMYSPEGGVDIESVAENTPEKIFTEEIDPATGILPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +     L+G+A  +      +LYKA+   D SL EINP++   + R+  +D+K++ DD+
Sbjct: 171 KIAFNFGLEGKAFKEMTKFVTSLYKAYEGCDSSLFEINPVLKTSDDRIIAVDAKVTLDDS 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D Q +RD  EED  E+EA++  LSY+ LDGN+GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALFRHKDYQNMRDTREEDPTEVEAREAGLSYVNLDGNVGCMVNGAGLAMATMDLIKFAGA 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-- 349
            PANFLDVGG AD  +V  AFK+I  D  V+ ILINIFGGI+RCD + KGI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEQAFKLILKDKKVEAILINIFGGIVRCDRVAKGIIEAYKNMGD 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           +IN+P+++RL+G N +   +LI E+G+NV TA+   +AA K+
Sbjct: 351 QINVPIIVRLQGTNAEEAVKLINEAGINVETAVQFKEAADKV 392


>gi|260062191|ref|YP_003195271.1| succinyl-CoA synthetase subunit beta [Robiginitalea biformata
           HTCC2501]
 gi|88783753|gb|EAR14924.1| Succinyl-CoA synthetase, beta subunit [Robiginitalea biformata
           HTCC2501]
          Length = 397

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/406 (40%), Positives = 239/406 (58%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHNKKEAVDAAKQLTQETGTSWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-- 114
                      GGV++  +LK V S   EI+G  L+T QT   G +V+ V V +      
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVESIAEEIIGMNLVTPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 115 ---LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R    V  + S +GGMDIEEVA   P  IF   IDP  G+      
Sbjct: 111 DSDTEEYYMSVLLNRAESRVMIMYSPEGGMDIEEVADKTPHLIFTEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+   D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGTAFKEMTRFVSSLYKAYEQSDASLFEINPVLKTSDDKILAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+R     E+RD+ EE+  E+EA+   L+Y+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALFRRKQYAEMRDLREENPIEVEARAVGLNYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D++VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDANVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N ++   ++  SGL V +A+   +AA K+   +
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAVQFQEAADKVKEVL 396


>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]
          Length = 1641

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 167/397 (42%), Positives = 236/397 (59%), Gaps = 4/397 (1%)

Query: 1    MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            +N+ EYQ+K LLR   V V    ++  ++ A SA++ L    YV+K+Q+ AGGRGKG F 
Sbjct: 1247 LNLLEYQSKELLRDCGVSVQNFAIVDDLNKANSALQNLHANEYVIKAQVLAGGRGKGWFD 1306

Query: 61   ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  KGGV +    K+VI  ++ +LG  L TKQT   G  V  + + +  +I RE Y+
Sbjct: 1307 N---GFKGGVHLTKDRKAVIDVVKNMLGHRLFTKQTSEDGILVQKIMIAESVNIARETYI 1363

Query: 121  SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +L+DR       IAS  GGMDIE VA+  P+ I  + +D   G+  E    +   L   
Sbjct: 1364 CILMDRQYNGPVLIASPAGGMDIETVAEKNPELIKTIPLDIYYGIDDEIAKDVSIFLGFM 1423

Query: 181  GQARIDGGDL-FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                         NL+K F D D   +EINPL+   + ++  +D+KISFDDNA +R  D+
Sbjct: 1424 DPTVQQKAIYELKNLWKLFVDIDALQVEINPLVETTDNQVIAVDAKISFDDNAQFRQQDL 1483

Query: 240  QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              L +   +D RE +A + +L+YI           GAGLAMATMDIIKL GG+PANFLDV
Sbjct: 1484 FALENNDTKDPREADALRFDLNYIXXXXXXXXXXXGAGLAMATMDIIKLNGGSPANFLDV 1543

Query: 300  GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
            GG   +++V  AF+I++ D  VK IL+N+FGGI+ C  + KGI++A   +++ IPLV+RL
Sbjct: 1544 GGSVKENQVYQAFRILSEDPKVKVILVNVFGGIVNCATIAKGIIAASHNLQLKIPLVIRL 1603

Query: 360  EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            EG NV    +L+AES L++ITA DLD+AA+K V  VK
Sbjct: 1604 EGTNVTEAKKLLAESNLSIITANDLDEAAKKAVTFVK 1640


>gi|325119408|emb|CBZ54961.1| cDNA FLJ54097, highly similar to Succinyl-CoA ligase (ADP-forming)
           beta-chain, mitochondrial, related [Neospora caninum
           Liverpool]
          Length = 495

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 173/414 (41%), Positives = 251/414 (60%), Gaps = 18/414 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--------PGPL-YVVKSQIHA 51
           +N+HEYQ+  +++++++   K  V S+   AE    T           P+ +VVK+Q+ A
Sbjct: 69  LNLHEYQSMKIMKEFHITTPKFAVASTAKEAEQEAATFLSETQSGDGEPVDFVVKAQVLA 128

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           GGRG G F+E     +GGV+V  S + V     ++LG TL+TKQTG  G   N V V + 
Sbjct: 129 GGRGLGFFRE--NGYQGGVQVCESPREVGIVADKMLGKTLVTKQTGKEGKTCNKVLVTER 186

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
             I +E Y+++L+DR++G    I S +GG  IE++A +YP+ I K+ ID   G++   + 
Sbjct: 187 FFIRKEKYVAILMDRSAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLR 246

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              ++L   G            LY+ F  KD + +E+NPL+   +GR+ V D+K++FDDN
Sbjct: 247 EFAELLGFSGDRLEAACQCIRGLYELFTSKDCTQIEVNPLVETHDGRVLVCDAKLNFDDN 306

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +R  D+   RD S+ED RE+ A   +L+YI LDG+IGCMVNGAGLAMATMDII L+GG
Sbjct: 307 AAFRQKDVFAQRDYSQEDPREVAADAADLNYIGLDGSIGCMVNGAGLAMATMDIIHLHGG 366

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           +PANFLDVGGGADQ ++  A KII  D     +L+NIFGGIMRCDV+ KG+++A +EV  
Sbjct: 367 SPANFLDVGGGADQLQIIEALKIIQQDKRANCVLVNIFGGIMRCDVIAKGLVAAAREVGF 426

Query: 352 NIPLVMRLEGANVDIGNRLIAE-------SGLNVITAIDLDDAAQKIVHAVKGV 398
           + P+V+RLEG N +    ++ E       + L ++   D D AAQ  V     V
Sbjct: 427 DKPVVLRLEGTNKEAAKEVLREVRTDPAYASLQLLQEDDFDKAAQLAVKVASVV 480


>gi|224535692|ref|ZP_03676231.1| hypothetical protein BACCELL_00556 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522692|gb|EEF91797.1| hypothetical protein BACCELL_00556 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 382

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 169/397 (42%), Positives = 238/397 (59%), Gaps = 18/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +Y +PV + V+ ++   A  A + L     VVK+Q+  GGRGK    
Sbjct: 1   MKVHEYQAKEIFSQYGIPVERHVLCNTPDEAVKAFRQLEVDKVVVKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V    REIL  T+        G  V  + + +  DI  E Y+
Sbjct: 58  -------GGVKLADNEELVRQHAREILKMTI-------KGFPVTRILISEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  I S  GGMDIEEVA++ P+KI +  IDPLIG+      S   ML  Q
Sbjct: 104 SFTIDRNTRSVVLIMSAAGGMDIEEVARNTPEKIIRYNIDPLIGLPQYLAQSFAFMLFDQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LYKAF + D SL EINPL++   G L  +D+K+ FDDNALYRH DI 
Sbjct: 164 AEQARRMTSILQDLYKAFMENDASLAEINPLVLTAKGTLTAIDAKMVFDDNALYRHPDIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + + E+  E  AK+   SY+ +DG+IGCMVNGAGLAM TMD+IKLYGG+PANFLD+G
Sbjct: 224 ALFEPTPEEQLEATAKERGFSYVRMDGDIGCMVNGAGLAMTTMDMIKLYGGSPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A KI+ +DS VK + INIFGGI RCD +  G++ A  +++  IP+++RL 
Sbjct: 284 GSSNPVKVIEAMKILLNDSKVKAVFINIFGGITRCDDVAIGLIQAFDQLQTEIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +IG +L+ +S      A  +++A   +V +VKG
Sbjct: 344 GTNENIGRKLLKDSN-RFQVAETMNEATLMVVKSVKG 379


>gi|332878190|ref|ZP_08445919.1| succinate-CoA ligase, beta subunit [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683928|gb|EGJ56796.1| succinate-CoA ligase, beta subunit [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 398

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 172/406 (42%), Positives = 241/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V  +   A +A K L        YVVK+QIHA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAQTPAEAVAAAKELTETTGTKWYVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++   L+ V     +I+G  LIT QT PTG  V+ V + +     G
Sbjct: 56  -----GGRGKGGGVKLAKGLQDVEPLASQIIGMHLITPQTPPTGKEVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R  G    + ST+GGMDIE VA   P  IF   IDP +G+      
Sbjct: 111 ESEPAEFYMSVLLNRAKGKNMIMYSTEGGMDIETVAAQTPHLIFTEEIDPAVGLQPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A+ D       LY A+   D +L EINP++   + ++  +D+K+  DDN
Sbjct: 171 QIAFNLGLSGEAQKDMVKFVTALYNAYVSSDANLFEINPVLKTSDNKILAVDAKVVLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD+ EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDIREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+   V
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKVKAVV 396


>gi|315223654|ref|ZP_07865508.1| succinyl-CoA synthase [Capnocytophaga ochracea F0287]
 gi|314946435|gb|EFS98430.1| succinyl-CoA synthase [Capnocytophaga ochracea F0287]
          Length = 397

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/407 (40%), Positives = 242/407 (59%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V  +   A  A K L        YVVK+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAHTPTEAVEAAKQLTEATNTQWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GG+++   L  V     +I+G  L+T QT P+G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGIKLAKGLDQVEPIASQIIGMQLVTPQTPPSGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEFYMSVLLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPAVGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L + G A+ +       LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 QIAFNLGVTGDAQKEMVKFVTALYNAYVSSDASLFEINPVLKTSDNKIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD  EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDTREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+   ++
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKVKEVLQ 397


>gi|313203888|ref|YP_004042545.1| succinyL-CoA synthetase, beta subunit [Paludibacter propionicigenes
           WB4]
 gi|312443204|gb|ADQ79560.1| succinyl-CoA synthetase, beta subunit [Paludibacter propionicigenes
           WB4]
          Length = 384

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 165/398 (41%), Positives = 240/398 (60%), Gaps = 20/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ L RKY +PV + V+  +V   E A K L   + VVK+Q+  GGRGK    
Sbjct: 1   MKIHEYQARQLFRKYGIPVPEDVLCYTVSEVEKAAKDLN-RMVVVKAQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +++  +S  ++ILG  +        G +V  V V D  DI +E Y+
Sbjct: 57  -------GGVKLARNVEDAVSAAKQILGMDI-------KGYKVEKVLVADAVDISKEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L+ DR S  V  +AS++GG++IEEVAK+ P+KI K  I+PL G+       +   L  +
Sbjct: 103 GLINDRNSKTVTLMASSEGGVEIEEVAKENPEKIIKFHINPLTGLLDYQARDIALQLFGE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  LYK + + D ++ EINPL++  +  +  +D K++FDDNAL+R  +I 
Sbjct: 163 IKTAQKAASIFKKLYKLYVETDATIAEINPLVLTPDNEVLAIDGKMNFDDNALFRQPEIL 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +R+  E++  EI+A    LSYI LDGNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 223 AMREPDEDELVEIDAHSKGLSYIRLDGNIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G +   KV  A  I+ +D  VK ++INIFGGI RCD + KG++ A++ +  +IP+V+RL 
Sbjct: 283 GSSSPQKVIDAMNILLNDKHVKAVMINIFGGITRCDDVAKGLIKAMEVISTDIPIVVRLS 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N   G  L+ ++ L   T   + +AAQ  +     +
Sbjct: 343 GTNAAEGLELLKQTNLP--TVSSMSEAAQLAIELSNNL 378


>gi|195169087|ref|XP_002025359.1| GL12039 [Drosophila persimilis]
 gi|194108827|gb|EDW30870.1| GL12039 [Drosophila persimilis]
          Length = 422

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 184/393 (46%), Positives = 257/393 (65%), Gaps = 6/393 (1%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+Q+K LL+KY V + +  V+ + ++    +KT   P YVVK+QI AGGRGKG F     
Sbjct: 33  EFQSKDLLQKYGVAIQQFKVLDNSNSDAEIVKTFECPEYVVKAQILAGGRGKGTFDN--- 89

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             KGGV + S+   V+S  ++++G  LITKQT  +G  VN V V    +I RE YL +L+
Sbjct: 90  GFKGGVHITSNKSDVLSLSKQMIGHRLITKQTPKSGILVNKVMVARSVNITRETYLCILL 149

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           DR       IAS  GGMDIE VA++ P+K+  + +D    +    +  +   LE +G   
Sbjct: 150 DREHNGPVLIASPAGGMDIEAVAEETPEKLLTVPLDIGKPIPEATLIKVAKFLEFKGDTV 209

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               +    LY  F   D   +EINPL     G +  +D+K++FDDNA +R  DI  + D
Sbjct: 210 QRCAEEIQKLYTFFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFAM-D 268

Query: 245 VSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           ++EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDII+L GG+PANFLDVGGG
Sbjct: 269 ITEEEADPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIQLNGGSPANFLDVGGG 328

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
            ++ +VA AF+I+T+D  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+RLEG 
Sbjct: 329 VNEAQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVRLEGT 388

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NVD    ++  SGL + TA DLDDAAQK V A+
Sbjct: 389 NVDKAREILKNSGLPIQTASDLDDAAQKSVAAL 421


>gi|308494725|ref|XP_003109551.1| hypothetical protein CRE_07436 [Caenorhabditis remanei]
 gi|308245741|gb|EFO89693.1| hypothetical protein CRE_07436 [Caenorhabditis remanei]
          Length = 439

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 171/398 (42%), Positives = 233/398 (58%), Gaps = 8/398 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    +L+ Y + V    V      A    K + G  YVVK+Q+ AGGRGKGRF   
Sbjct: 26  LHEHHGMKILQDYEIKVPPFGVAQDSDTAYKVAKKIGGKDYVVKAQVLAGGRGKGRF--- 82

Query: 63  PADSKGGVRVES----SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            +  +GGV++      S   V      ++G+ LITKQT   G +   V V       RE 
Sbjct: 83  SSGLQGGVQIVFTWYFSPDEVQQKAGMMIGAHLITKQTDHRGKKCEEVMVCKRLFTRREY 142

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+ +DR +     IAS+QGG++IEEVA   P  I K+ ID  +G+T E    +   + 
Sbjct: 143 YFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMG 202

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                     ++   LYK F   D +L+EINP+    NG +  +D K+  D NA +R   
Sbjct: 203 FSKDCEQQASEIIEKLYKMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFRQTK 262

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           + +L+D  +ED  EI A   NL+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 263 LFDLKDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGGEPANFLD 322

Query: 299 VGGGADQDKVAAAFKIITSD-SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           VGGGA  ++V  AFKIIT+D   V  IL+NIFGGIMRCDV+ +GI+ A +E+ + IP+V+
Sbjct: 323 VGGGATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIKAARELDLKIPIVV 382

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RL+G  V+    LIA S L ++   +LD+AA+ +V   
Sbjct: 383 RLQGTKVEDAKALIATSQLRILPCDNLDEAAKMVVKLS 420


>gi|298712066|emb|CBJ26646.1| beta chain succinyl-coa synthetase synthetase [Ectocarpus
           siliculosus]
          Length = 463

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 162/392 (41%), Positives = 243/392 (61%), Gaps = 9/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPG----PLYVVKSQIHAGGRGK 56
           +N+HEY +  ++ ++++ +    +  +   AE A   + G       V+K+Q+ +GGRG+
Sbjct: 46  LNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGR 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F       + GV +            E+LG  LITKQTG  G   + V + +   + R
Sbjct: 106 GHFDN---GFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRR 162

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+YLS+++DR S     +A   GG  IE++A+  P+ I K  +D + G+T      + + 
Sbjct: 163 EMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEH 222

Query: 177 LEL--QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
           L+L   G +   G  L  N+Y  F ++D +L+EINPL     GR+   D+K++FDDNA +
Sbjct: 223 LKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEW 282

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R  D  + RD ++ED+RE+EA +++L+YI L GNIGCMVNGAGLAM+TMDIIKL GG PA
Sbjct: 283 RQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPA 342

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA +++V  AF+++ +D  V  IL+NIFGGIMRCDV+  G+++A K + +  P
Sbjct: 343 NFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKP 402

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +V+RL+G NV+  N LIA SG  +I + DLDD
Sbjct: 403 IVIRLQGTNVEQANELIANSGFKMIISNDLDD 434


>gi|159466790|ref|XP_001691581.1| succinate-coa ligase beta chain [Chlamydomonas reinhardtii]
 gi|158278927|gb|EDP04689.1| succinate-coa ligase beta chain [Chlamydomonas reinhardtii]
          Length = 421

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 174/396 (43%), Positives = 256/396 (64%), Gaps = 7/396 (1%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGRF 59
           N+HEYQ   ++ K+ V V  G+  +++   + A+  +       V+KSQI AGGRG G+F
Sbjct: 30  NVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVDQMADEKGEVVIKSQILAGGRGLGKF 89

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  +GGV +       +   +++LG+TL+TKQTGP G  VN + +     + RE+Y
Sbjct: 90  ---TNGLQGGVHIVP-KAKALELAKQMLGATLVTKQTGPAGKPVNTLLISKKMKLKREMY 145

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+DR +     I  ++GG  IE++A+ +P+KI K+ ID  +G+T      + + L +
Sbjct: 146 FAILLDRKTAGPMMIGCSEGGTSIEDLAEKFPEKIIKIPIDIRVGITDAQAMQMVEGLRV 205

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G        +   LY  F   D +++E+NPL    +G L   D+K+ FDDNA YR   I
Sbjct: 206 TGDKAAAAKQI-KALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPI 264

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +++D S+ D RE+ A +++L+YI LDG+IGCMVNGAGLAMATMDIIK++GGAPANFLDV
Sbjct: 265 FDMKDESQIDPREVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDV 324

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A++ +V  AFKI+T D  VK IL+NIFGGIM+CDV+  GI++A K+V + +PLV+RL
Sbjct: 325 GGSANEQQVVEAFKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRL 384

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG NV  G  ++A SG+ +ITA DLDDAA+K V ++
Sbjct: 385 EGTNVARGKEILATSGMTIITADDLDDAAKKAVASI 420


>gi|289209201|ref|YP_003461267.1| succinyl-CoA synthetase subunit beta [Thioalkalivibrio sp. K90mix]
 gi|288944832|gb|ADC72531.1| succinyl-CoA synthetase, beta subunit [Thioalkalivibrio sp. K90mix]
          Length = 386

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 180/395 (45%), Positives = 251/395 (63%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAKA  R   +PV  G VI+      +A + L     +VK+Q+H+GGRGK    
Sbjct: 1   MNLHEFQAKARFRDAGIPVPDGQVITHTDELPAAWQALGAERVLVKAQVHSGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S ++      ++LGS L+T Q+GP G  V+ + +E  ADI RE Y 
Sbjct: 58  -------GGVVMADSPEAAREAAEKLLGSRLVTGQSGPEGLPVDQLLLEPAADIAREFYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LLVDR    +A + S +GGMDIE +A + P+ +  L I P  GV       +   L L 
Sbjct: 111 ALLVDRARERLALVVSAEGGMDIETLAAERPEAVITLPIHPATGVMPFHGRRVAFALGLS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L  N +  F   D  LLEINPL++  + +L  +D+K++ DD+A YR   + 
Sbjct: 171 GEPAKAMAQLVTNAHALFQQVDAQLLEINPLVLTADDQLLAIDAKLTVDDSAAYRQKALM 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA +H+L+YI LDG+IGCMVNGAGLAMATMD+IK +GG PANFLDVG
Sbjct: 231 AERDARQRDPAEEEAHEHDLNYIRLDGSIGCMVNGAGLAMATMDLIKHHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   ++V AAFK+I SD SVK +L+NIFGGI+RCD++ +GI++A++EV++ +P+V+RLE
Sbjct: 291 GGTTVERVTAAFKLILSDPSVKAVLVNIFGGIVRCDLIAEGIIAAIREVQVQVPVVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G   +A SGL+VI A DLD AA+ +V AV
Sbjct: 351 GTNAEQGREALASSGLDVIPAADLDRAARTVVEAV 385


>gi|256820557|ref|YP_003141836.1| succinyl-CoA synthetase subunit beta [Capnocytophaga ochracea DSM
           7271]
 gi|256582140|gb|ACU93275.1| succinyl-CoA synthetase, beta subunit [Capnocytophaga ochracea DSM
           7271]
          Length = 397

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/407 (40%), Positives = 243/407 (59%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V  +   A  A K L        YVVK+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAHTPTEAVEAAKQLTEATNTQWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GG+++   L  V     +I+G  L+T QT P+G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGIKLAKGLDQVEPIASQIIGMQLVTPQTPPSGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEFYMSVLLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPAVGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L + G+A+ +       LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 QIAFNLGVTGEAQKEMVKFVTALYNAYVSSDASLFEINPVLKTSDNKIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD  EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDTREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+   ++
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKVKEVLQ 397


>gi|327402507|ref|YP_004343345.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Fluviicola
           taffensis DSM 16823]
 gi|327318015|gb|AEA42507.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Fluviicola
           taffensis DSM 16823]
          Length = 403

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 176/405 (43%), Positives = 247/405 (60%), Gaps = 13/405 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K++L+KY V + +GVV+  V  A +A K L        YVVK+QIHAGGRGK
Sbjct: 1   MNLHEYQGKSILQKYGVAIQRGVVVEKVEDAIAAAKKLTEETGTGWYVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-- 114
           G  +E  +    GV +   +  V   ++ ILG  L T QT   G  V+ V + +      
Sbjct: 61  GVVEETGSH---GVVLAKGIDQVEEKVKGILGGHLETAQTNGVGKLVSKVLLAEDVYYPG 117

Query: 115 ---LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              + E Y+S+L+DR  G    + ST+GGMDIE VA D P  IFK  IDP +G+      
Sbjct: 118 EAEVEEFYMSVLLDRERGRNTIMYSTEGGMDIETVAHDTPHLIFKEEIDPRVGIQGFQAR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A         NLY A+   D ++ EINP++   + ++  +D+K++ D N
Sbjct: 178 KIAFNLGLSGEAFKQMTKFVVNLYNAYEGCDAAMFEINPVLKTSDNKIIAVDAKVTLDGN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
            LYRH D   +RD  EED  ++EA    L+++ LDGN+ CMVNGAGLAMATMDIIK  GG
Sbjct: 238 GLYRHPDYAAMRDTMEEDPLDVEADAAGLNFVKLDGNVACMVNGAGLAMATMDIIKYSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
           +PANFLDVGG A+ ++V  AF II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 298 SPANFLDVGGTANAERVEKAFHIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKSIGN 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P+++RL+G N     ++I +SGLNV +A+ L +AA K+   +
Sbjct: 358 IPVPIIVRLQGTNAVEAKKIIDDSGLNVHSAVLLQEAADKVKEVL 402


>gi|213963666|ref|ZP_03391917.1| succinyl-CoA synthetase beta chain [Capnocytophaga sputigena Capno]
 gi|213953661|gb|EEB64992.1| succinyl-CoA synthetase beta chain [Capnocytophaga sputigena Capno]
          Length = 397

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/406 (40%), Positives = 241/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V V +G+V  +   A  A K L        YVVK+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRVQRGIVAQTPTEAVEAAKQLTEATNTQWYVVKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GG+++   L  V     +I+G  L+T QT P+G +V+ V + +     G
Sbjct: 56  -----GGRGKGGGIKLAKGLDQVEPIASQIIGMQLVTPQTPPSGKKVHQVLIAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
               +E Y+S+L++R  G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ESEPKEFYMSVLLNRAKGKNMIMYSTEGGMDIEAVAEKTPHLIFTEEIDPAVGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L + G A+ +       LY A+   D SL EINP++   + ++  +D+K++ DDN
Sbjct: 171 QIAFNLGVTGDAQKEMVKFVTALYNAYVSSDASLFEINPVLKTSDNKIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH +    RD  EE+  E+EAK   L+Y+ALDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHPEYAAYRDTREENPVEVEAKAVGLNYVALDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
           +PANFLDVGG AD  +V AAF+II  D +VK ILINIFGGI+RCD + +G++ A + +  
Sbjct: 291 SPANFLDVGGTADAKRVEAAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYQNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N ++   ++  SGL V +AI   +AA K+   +
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVHSAILFQEAADKVKEVL 396


>gi|120435110|ref|YP_860796.1| succinyl-CoA synthetase beta chain [Gramella forsetii KT0803]
 gi|189030244|sp|A0LZD4|SUCC_GRAFK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117577260|emb|CAL65729.1| succinyl-CoA synthetase beta chain [Gramella forsetii KT0803]
          Length = 398

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 171/406 (42%), Positives = 244/406 (60%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  + V + +G V  +   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNIHEYQGKEILNSFGVRIQRGTVARNAKEAVEAAKELTEKTGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +LK V     EI+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLKEVEEIAGEIIGMNLVTPQTSAEGKKVHQVLVTEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +   E Y+S+L++R +G    + ST+GGMDIE VA++ P+ IF   IDP  G+      
Sbjct: 111 DNEPEEYYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPELIFTEEIDPATGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+   +      +LY+AF   D SL EINP++   +  +  +D+K++ DDN
Sbjct: 171 RIAFNLGLSGKGFKEMTKFVMSLYEAFEKSDSSLFEINPVLKTSDDLIMAVDAKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D  E+RDV EE++ E+EA++  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDYAEMRDVREENATEVEAREVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF++I  D  V+ IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRLILKDDKVEAILVNIFGGIVRCDRVAQGIVDASKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            +N+P+++RL+G N DI   LI  SGL V +AI   +AA K+   +
Sbjct: 351 AMNVPIIVRLQGTNADIAKELIDNSGLKVSSAIQFQEAADKVQEVL 396


>gi|289741223|gb|ADD19359.1| GTP-specific succinyl-CoA synthetase beta subunit [Glossina
           morsitans morsitans]
          Length = 414

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 260/398 (65%), Gaps = 6/398 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KYNV + +  ++ S +  ++ ++    P YVVK+QI AGGRGKG F 
Sbjct: 21  LNLLEFQSKDLLQKYNVAIQQFQILDSSNNDKTVLEKFDCPEYVVKAQILAGGRGKGVFD 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + +S + V++  ++++G+ LITKQT  +G  V  V V    +I+RE YL
Sbjct: 81  N---GFKGGVHITTSKEEVLNLSKKMIGNRLITKQTPKSGITVKKVMVARSVNIVRETYL 137

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L+DR       IAS  GG+DIE VA++ P+KI  + ++    +  + +  +   L+ +
Sbjct: 138 CILLDREHNGPVLIASPAGGVDIETVAEETPEKIKTVPLNIDQPIPEQTLMEVAKFLDFK 197

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A          LY  F   D   +EINP      G +  +D+K++FDDNA +R  +I 
Sbjct: 198 GAAIKTCAAEIQKLYTLFKAVDAVQIEINPFAETDKGEVISVDAKLNFDDNAEFRQKEIF 257

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + D+SEE  D RE+EA ++NL+Y+ +DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 258 SM-DISEEESDHREVEATKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLNGGDPANFLD 316

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG  +++V  AF+I+TSD  VK IL+N+FGGI+ C  +  G+++A K + +N+PLV+R
Sbjct: 317 VGGGVKEEQVLKAFQILTSDPKVKSILVNVFGGIVNCATIANGVVTASKVLNLNVPLVVR 376

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           LEG NV    +++ +SGL + TA DLDDAAQK V+A++
Sbjct: 377 LEGTNVTEARKILKDSGLAIQTASDLDDAAQKAVNALQ 414


>gi|157877084|ref|XP_001686874.1| succinyl-CoA ligase [GDP-forming] subunit beta [Leishmania major
           strain Friedlin]
 gi|68129949|emb|CAJ09257.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
           major strain Friedlin]
          Length = 413

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 182/397 (45%), Positives = 254/397 (63%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +++     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKQIIKDNGGRVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  VN +YV +    I RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTLYVTEAVAGIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    FI S +GGM IEE+AK +P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    LY     KD +++EINP + ++NG +  +D+K+SFDDNA +R   I
Sbjct: 197 AGETTERAAEQIKALYNIGKSKDCTMVEINPFVELENGDVMEIDAKLSFDDNAAFRQRGI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ DS+E+ AK+H+L+YIALDGN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FALEDQTQIDSKEVLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A ++++ AAFKIIT DS+VK IL+NIFGGIM CDV+ +G+++A K +   IP+V+RL
Sbjct: 317 GGSASEEQIVAAFKIITGDSNVKSILVNIFGGIMHCDVIAQGVVNASKALNTTIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I  SGL +    D D AA+K V   K
Sbjct: 377 CGTNEQRGKEIIRNSGLVIHPVEDFDSAARKAVELAK 413


>gi|163786029|ref|ZP_02180477.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteriales bacterium ALC-1]
 gi|159877889|gb|EDP71945.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [Flavobacteriales bacterium ALC-1]
          Length = 396

 Score =  421 bits (1083), Expect = e-116,   Method: Composition-based stats.
 Identities = 176/401 (43%), Positives = 245/401 (61%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K LL  + V + +G+V  S  AA  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKELLSSFGVRIQRGIVAQSAKAAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V      I+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEEIAGNIIGMNLVTPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +   E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   +DP +G+      
Sbjct: 111 DNEPEEYYMSVLLNRGTGKNMIMYSTEGGMDIETVAEETPHLIFTEEVDPALGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D SL EINP++   + ++  +DSK++ DDN
Sbjct: 171 RVAFNLGLSGTAFKEMTKFVSALYTAYVKSDASLFEINPVLKTSDDKIMAVDSKVTLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D+ ELRD+ EE+  E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHRDLAELRDLREENPIEVEAGALGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V AAFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVEAAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI   LI  SGL+V++A +  +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKELIDNSGLDVMSATEFQEAADKV 391


>gi|332667707|ref|YP_004450495.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332336521|gb|AEE53622.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 398

 Score =  421 bits (1083), Expect = e-116,   Method: Composition-based stats.
 Identities = 175/401 (43%), Positives = 244/401 (60%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K +L++Y V +  G+V  SV  AE+A   L   + V+K+QIHA         
Sbjct: 1   MNLHEYQGKEILQRYGVAIQTGIVAQSVAEAEAAWSQLGSGVVVIKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP----TGSRVNCVYVEDGA---- 112
                  GGV++  +L  V +    I+G  L T QT       G  V  V + + +    
Sbjct: 52  -GGRGKGGGVKLAKNLDDVKTHAGNIIGMMLRTPQTPGGMEGPGKLVRKVLIAEDSYAPD 110

Query: 113 -DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            +  +E Y+S+L+DR       I ST+GGMDIE VA+  P+K+ K  +DP+ G       
Sbjct: 111 FNACKEYYVSILMDREKKCNVIIYSTEGGMDIEAVAEHTPEKVQKEWVDPISGFQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A  +       LY AF   D SL EINP +   + R+  +D+K++ DDN
Sbjct: 171 KIAFNLGLSGKAFKEFTTFITKLYTAFVASDASLFEINPCLRTGDDRILAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D++ +RD  EED  ++EA++  L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 231 ALYRHPDLEAMRDKDEEDPTDVEAQEFELNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V  AFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVENAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I++P+++RL+G N D+  ++I ESGL V +AI L +AA  +
Sbjct: 351 ISVPIIVRLQGTNADLAKKMIDESGLKVYSAIQLAEAAALV 391


>gi|225010652|ref|ZP_03701122.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-3C]
 gi|225005205|gb|EEG43157.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-3C]
          Length = 398

 Score =  421 bits (1083), Expect = e-116,   Method: Composition-based stats.
 Identities = 168/406 (41%), Positives = 243/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGMVAQNPEEAVAAAKQLTEETGTSWFVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S    I+G  L+T QT   G RV+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLEEVASISDAIIGMDLVTPQTSAAGKRVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L+DR SG    + ST+GGMDIEEVA+  P  IF   I P +G+      
Sbjct: 111 ESETSEFYMSVLLDRASGRNMIMYSTEGGMDIEEVAEHTPHLIFTETISPAVGIMPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGNAFKEMTKFVMSLYKAYEESDASLFEINPVLKTSDDKILAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     ++RD+ EE++ E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK+ GG
Sbjct: 231 ALYRRKVYADMRDLREENAIEVEANAVGLNYVDLDGNVGCMVNGAGLAMATMDLIKMAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N ++   ++  SGL V +A+   +AA K+   +
Sbjct: 351 AIKVPIIVRLQGTNAELAKEILDNSGLAVKSAVQFQEAADKVKEVL 396


>gi|282858271|ref|ZP_06267457.1| succinate-CoA ligase, beta subunit [Prevotella bivia JCVIHMP010]
 gi|282588980|gb|EFB94099.1| succinate-CoA ligase, beta subunit [Prevotella bivia JCVIHMP010]
          Length = 377

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 173/396 (43%), Positives = 233/396 (58%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK     Y +PV + ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEFQAKKFFADYGLPVDRSILCKTPEEAVAAYKQLGVEKAVVKAQVHIGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   +      ILG  +        G  V  + V +  DI  E Y 
Sbjct: 58  -------GGVKLGSNENEIREHATAILGMNI-------KGYTVEKILVGEAVDIAAEYYT 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +     + S  GGMDIE+VAKD P+KI K++IDPLIG++          L   
Sbjct: 104 SILVDRKTKCPILMLSRAGGMDIEQVAKDTPEKIAKIVIDPLIGMSDYVAREAAFQLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF NLYK F +KD SL EINPL+ + +G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MALVKQAVPLFKNLYKLFVEKDASLAEINPLVKLGDGTLKAIDAKMTFDDNALFRHPDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + + E+ +E EAK    SY+ L GNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTAEERKEREAKDKGFSYVNLGGNIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  VK +LINIFGGI RCD + KG+L A K +  +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVAKGLLEAFKIIHTDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G +      + DA  K V   K
Sbjct: 344 GTNEKEGRALLE--GTHFTVGTSMADAGHKAVELSK 377


>gi|223993443|ref|XP_002286405.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977720|gb|EED96046.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 419

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 173/400 (43%), Positives = 245/400 (61%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEY +  ++ ++ +   K  V +S   AE    T+     V+K+Q+ +GGRG G FK
Sbjct: 7   LNVHEYISMEIMNQHGIATPKNFVANSPEEAEHIFTTMMNKHVVIKAQVLSGGRGLGTFK 66

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + +           +LG  L+TKQ  P G     V + +   +  E+YL
Sbjct: 67  N---GFKGGVHMVTRKGQAAEMASSMLGQELVTKQ-APNGILCQKVLLMERMYMRNEMYL 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR SG    + S +GG  IE+VA   P+ IF   ID  +G+T E    +   + L+
Sbjct: 123 SILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLE 182

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              ++      L  NLY  F   D + +E+NPL     G + V D+K++FDDNA +R   
Sbjct: 183 EGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKS 242

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I E RD S+ED RE+EA +++L+YI LDGNIGCMVNGAGLAM+TMDII+L GG+PANFLD
Sbjct: 243 IFERRDFSQEDPREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLD 302

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA++ +V  AF+++ SD  V+ IL+NIFGGIMRCDV+  GI++A +E+ I  PLV+R
Sbjct: 303 VGGGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIR 362

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           L+G NVD   +LI   G  +I A DL+DAA+K V   + V
Sbjct: 363 LQGTNVDAARKLIEGCGFRMILAEDLEDAAEKAVGVAEIV 402


>gi|269959063|ref|YP_003328852.1| succinyl-CoA synthetase beta subunit [Anaplasma centrale str.
           Israel]
 gi|269848894|gb|ACZ49538.1| succinyl-CoA synthetase beta subunit [Anaplasma centrale str.
           Israel]
          Length = 388

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 196/395 (49%), Positives = 260/395 (65%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L  + V V +GV + SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 1   MNIHEFQAKGVLSSFGVTVPRGVAVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S ++++L S L+T QT P G +VN VY+E+G DI +E Y+
Sbjct: 58  -------GGVKIGKTKDEVKSLVKQMLHSVLVTHQTSPEGQKVNKVYLEEGVDIGKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DIE VAK+ P  +  + IDPL G  S     LC    L 
Sbjct: 111 SAVVDRSVGRVSIIFSSEGGVDIETVAKERPNMVSVVHIDPLYGFRSFHGQELCRRFGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I 
Sbjct: 171 PKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 KLQDPDEHAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +++PLV+RL 
Sbjct: 291 GGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVDVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 350 GTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 384


>gi|158520091|ref|YP_001527961.1| succinyl-CoA synthetase, beta subunit [Desulfococcus oleovorans
           Hxd3]
 gi|226734944|sp|A8ZRW7|SUCC_DESOH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|158508917|gb|ABW65884.1| succinyl-CoA synthetase, beta subunit [Desulfococcus oleovorans
           Hxd3]
          Length = 388

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 187/386 (48%), Positives = 246/386 (63%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHE+Q K L R Y +P  +G ++++  AA  A   L G   VVK+QIHA         
Sbjct: 1   MKIHEFQTKELFRTYGIPTPEGRMVNTAEAAGEAAGELGGFPVVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     S    +LGS L+T QTGP G+ V  V VE G  I +ELYL
Sbjct: 52  -GGRGKGGGVKLAKSADEAKSLAGAMLGSRLVTPQTGPEGTLVQKVLVEQGVSIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +  +  +AS  GGMDIE VA+  P+KI K+ ++PL G+++         L L 
Sbjct: 111 SVVADRETAGIVIMASEAGGMDIEAVAETTPEKILKVFVNPLAGLSAFHCRQAAYGLNLP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A      +   L+K F D D SL+EINPLI+  +  +  LD+KI+FDD+AL+RH DI 
Sbjct: 171 AEAIKPFTQVVSGLFKLFVDYDASLVEINPLILTTDKAVMALDAKINFDDSALFRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EED  E+EA + NL+YI +DGN+G MVNGAGLAMATMDIIKL G  PANFLDVG
Sbjct: 231 ALRDTDEEDPLEVEASRFNLNYINMDGNVGNMVNGAGLAMATMDIIKLAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + V   F+II SD  VK IL+NIFGGI+RCDVL  GI+ A +   I++PLV+R+E
Sbjct: 291 GGANAEMVENGFRIILSDPKVKCILVNIFGGILRCDVLASGIVQAARNTAIHVPLVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NVD G R++AESGL++ +A  L D
Sbjct: 351 GTNVDEGKRILAESGLDLHSAASLKD 376


>gi|296274210|ref|YP_003656841.1| succinyl-CoA synthetase subunit beta [Arcobacter nitrofigilis DSM
           7299]
 gi|296098384|gb|ADG94334.1| succinyl-CoA synthetase, beta subunit [Arcobacter nitrofigilis DSM
           7299]
          Length = 390

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 184/395 (46%), Positives = 266/395 (67%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L RKY++P  KG +++     +  ++++    +V+K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKNLYRKYDIPTTKGKLLTHPSQLDDILRSVGKNKWVIKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV + +S K    ++R +LGS L+T QT   G  VN +Y+E+  +I  E+YL
Sbjct: 58  -------GGVVLVNSKKEANEEVRRLLGSNLVTHQTNAQGQAVNSIYIEEPCEIKDEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + +VDRTS  +  I S++GGMDIEEVA+ +P+KI +  I+P++G+       +C+ L   
Sbjct: 111 AFIVDRTSQRIMIITSSEGGMDIEEVAERFPEKILRNPINPIVGIMPAQCRQICEDLGFD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +   DL  N+YK F  KD+SL+EINPL++ K+ +L  LD K+  D++ALYR   + 
Sbjct: 171 KDLSVQMIDLMKNIYKMFVQKDLSLVEINPLVVTKDNKLICLDGKVVVDNSALYRQPKMN 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+RD S+ED RE++A++ +L+Y++LDGNI CMVNGAGLAMATMD+IK +GG PANFLDVG
Sbjct: 231 EIRDDSQEDERELKAEKLDLNYVSLDGNIACMVNGAGLAMATMDLIKTHGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  ++ +V  AF+II SD+ V GIL+NIFGGI+RCD++  GI+ A +++ INIP+V+RLE
Sbjct: 291 GSVNEKRVIEAFEIILSDTKVNGILVNIFGGIVRCDIIAAGIIGAAEKMNINIPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N   G  LI  S + V    DLD AA KI+   
Sbjct: 351 GTNAKEGLELIKNSNVTVYEEADLDKAALKIIELS 385


>gi|258592194|emb|CBE68503.1| succinyl-CoA synthetase, beta subunit [NC10 bacterium 'Dutch
           sediment']
          Length = 392

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 182/395 (46%), Positives = 253/395 (64%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHE+QAKA+L  Y VPV KG  +++   A    + L G + V+K+QIHA         
Sbjct: 1   MKIHEFQAKAILGAYEVPVPKGEAVTTPVDAARVAEQLGGAV-VLKAQIHA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   SS +        ++GS L+T QTGP G  V  + VE+   + RELY 
Sbjct: 51  -GGRGKGGGILSASSPQEAEELAERLIGSRLVTHQTGPEGRVVKRILVEEQVAVSRELYA 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     +A   GGM+IEEVA   P+ I ++++DP + + S  +  L   L L 
Sbjct: 110 GIVLDRRAARPVMMAGAIGGMEIEEVAAKDPESITRVVVDPAVQLQSFHIRRLVLRLALP 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q +     LF  LY+ F +KD SL+EINPL+I  +GRL  LD+K++ DDNAL+RH D++
Sbjct: 170 QQVQRTATGLFSALYRVFQEKDCSLVEINPLVITTDGRLLALDAKLNVDDNALFRHADLK 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  EE   EIEA +  L+YI LDG +GCMVNGAGLAMATMD++K  GG PANFLDVG
Sbjct: 230 ALRDPDEELPLEIEASKFGLNYIKLDGTVGCMVNGAGLAMATMDLVKFVGGEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +++  AF+I+ SD SV+ +LINIFGGI+RC+ L +G++ AV+ + + +P+V+R+E
Sbjct: 290 GGASAEQIEQAFRILISDRSVRVVLINIFGGILRCERLAEGVIRAVRSLGVTMPIVVRME 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD G R++ ESGLN ITA  + DAA+K V A 
Sbjct: 350 GTNVDHGTRMLTESGLNFITAEGMQDAAEKAVKAS 384


>gi|322436808|ref|YP_004219020.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9]
 gi|321164535|gb|ADW70240.1| succinyl-CoA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9]
          Length = 389

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 188/389 (48%), Positives = 254/389 (65%), Gaps = 13/389 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M IHEYQAK +LRKYNVPV  G + +++  A++A K L      + VVK+QIHA      
Sbjct: 1   MKIHEYQAKEILRKYNVPVPGGEMATTLEEADTAAKALFAAGNTVVVVKAQIHA------ 54

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  SL    +  + ILG  LIT QTGPTG +V  + +E+G+ I RE
Sbjct: 55  ----GGRGKGGGVKVAKSLDDANTASKAILGMQLITHQTGPTGQKVQRLLIEEGSLIDRE 110

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL L++DR S  V F+AS  GGM+IEEVA   P  I+K  +DP++G+      SL   L
Sbjct: 111 LYLGLVLDRASAKVVFMASQSGGMEIEEVAHATPDLIYKEYVDPVVGLQPWQARSLAFKL 170

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L              LYKAF + D +L+EINP I  K+G+L  LD KI+FDDNA++RH 
Sbjct: 171 GLTTAQINPAVSFMMGLYKAFIETDSTLMEINPFITTKDGKLMALDCKINFDDNAMFRHK 230

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           D++ELRD++EED  E+EA +  L+YI LDGNI CMVNGAGLAMATMDII+  GG  ANFL
Sbjct: 231 DLKELRDLAEEDPLEVEASKFALNYIKLDGNIACMVNGAGLAMATMDIIEYAGGKAANFL 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGGA+Q+++  AF I+ SD +VK I INIFGGI+R DVL   +++A +++ + +P+++
Sbjct: 291 DVGGGANQEQIENAFGILLSDPNVKAIFINIFGGILRVDVLATAVVAAARKLNVQLPIIL 350

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDD 386
           RLEG NV+ G +++AESGL       + +
Sbjct: 351 RLEGTNVEEGRKILAESGLKFEVGTTMKE 379


>gi|290982641|ref|XP_002674038.1| succinyl-CoA synthetase beta sub-unit [Naegleria gruberi]
 gi|284087626|gb|EFC41294.1| succinyl-CoA synthetase beta sub-unit [Naegleria gruberi]
          Length = 430

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 186/406 (45%), Positives = 258/406 (63%), Gaps = 14/406 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           +NIHEYQAK L ++++VP  +G+ I ++ A  + +  L        ++VKSQI AGGRGK
Sbjct: 29  LNIHEYQAKELFKQFDVPHQRGITIDNLEAIPATLAQLKTETGTKNFIVKSQILAGGRGK 88

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F E     +GGV+   + +       ++LG+TL+TKQTG  G +V+ ++  +  D  R
Sbjct: 89  GSFIE--NGFQGGVKFTKNEQVAADVASKMLGNTLVTKQTGEKGIKVDKLFFAECLDFNR 146

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCD 175
           E Y ++L+DR +    F+ S +GGMDIE+VA++ P+ I  LLI D   G T  D      
Sbjct: 147 EFYFAILLDRAAQCPVFVGSYEGGMDIEQVAEEKPEAIKTLLIRDLENGPTLADATEYAK 206

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN-GRLRVLDSKISFDDNALY 234
            L+ +         +   LY  F   D + LEINPL+ + N   L  +D K++ DDNA +
Sbjct: 207 ELQFKKP--EQAAQIMKKLYTMFRKTDAAQLEINPLVELDNTADLSCVDCKLNIDDNAAF 264

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           R  +I  +RD + ED RE+EA +  L+YI LDGNIGC+VNGAGLAMATMDII+L+GGAPA
Sbjct: 265 RQANIFAMRDWAAEDPREVEAAKCELNYIGLDGNIGCLVNGAGLAMATMDIIQLHGGAPA 324

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA  ++V  AF II  D SVK +L+NIFGGIMRCDV+ +GI+ A +E+ + IP
Sbjct: 325 NFLDVGGGATTNQVKQAFTIILKDESVKCVLVNIFGGIMRCDVIAEGIVQAARELGVRIP 384

Query: 355 LVMRLEGANVDIGNRLIAESG----LNVITAIDLDDAAQKIVHAVK 396
           +V+RL G NVD G +++ E+     L VI A DLDDAA K V  +K
Sbjct: 385 IVVRLAGTNVDKGLQILEEAAKTGTLKVIAAKDLDDAAIKSVAQLK 430


>gi|66548265|ref|XP_624365.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Apis mellifera]
          Length = 449

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 166/395 (42%), Positives = 233/395 (58%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + IHE  A  LL+   +P     V  +   AE     L     V+K+Q+ AGGRG G FK
Sbjct: 35  LQIHENLAYTLLKDAGIPTPPFGVAKTPEEAEKIAANLNTKDIVLKAQVLAGGRGIGHFK 94

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +       GV +  S K   +    ++G  LITKQTGP G   N V V       +E Y+
Sbjct: 95  DTNV---RGVVMCESPKEAKTVASSMIGKLLITKQTGPAGKICNSVMVTTRMFPRKEYYI 151

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++++ T      I S QGG++IE++A   P+ I    ID + G+T E +  + D L L+
Sbjct: 152 SVMLETTFDGPVIIVSKQGGVNIEDIAATSPEAISYTPIDIMKGLTLEQINKIVDNLGLE 211

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+++     +  NLY+ F +KD  LLEINP  +        LD K SFDD+A +R  ++ 
Sbjct: 212 GESKKLTSIIICNLYELFIEKDALLLEINPFALDICEEYFALDCKCSFDDSAEFRQKELF 271

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D+S+ D  E+ A + NL+YI LDGNIGC+VNGAGLAMATMD+IK+ GG PANFLDVG
Sbjct: 272 NLQDISQIDPSELHATKFNLNYIHLDGNIGCLVNGAGLAMATMDVIKMNGGFPANFLDVG 331

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A ++ V   FKII SD +V+ I +NIFGGIMRCD++ +GI++A KE++I +P+V+RL+
Sbjct: 332 GSATKEAVTEGFKIILSDPNVEAIFVNIFGGIMRCDIIAQGIIAASKELQIKVPIVVRLQ 391

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  V   N+LI ++ L V    D   AA   V   
Sbjct: 392 GTRVKEANQLIKDAQLKVFVEEDFSTAAIAAVKLA 426


>gi|322818641|gb|EFZ25991.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           cruzi]
          Length = 418

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 177/387 (45%), Positives = 260/387 (67%), Gaps = 5/387 (1%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NIHEYQ+KA+L++       G+   ++   E+A+  +     VVKSQI AGGRG G F++
Sbjct: 22  NIHEYQSKAILKEGGCKTEFGIPCRTLEEVEAALGKIKTEKKVVKSQILAGGRGMGTFED 81

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYL 120
                KGGV V  +    +   +++L  TL+TKQTGP G RVN +YV +    I RELYL
Sbjct: 82  ---GFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTGPKGQRVNLLYVTEAVTGIKRELYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +    FI S +GGM IEE+A+  P+KI ++ I+   G++ ++  +    L   
Sbjct: 139 ALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKRMRINVQEGISHDNCVAFAKELGFS 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +  +    LY     KD + +EINPL+ ++NG +  +D+K+SFDDNA +R  DI 
Sbjct: 199 GRASENAAEQVKALYNVGKSKDCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I + GG PANFLDVG
Sbjct: 259 SLADDTQIDPKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRL 359
           G A ++++ AAF+IIT D  VKGIL+NIFGGIMRCD++ +GI++A +E+K  NIP+V+RL
Sbjct: 319 GSATREQIVAAFQIITGDEKVKGILVNIFGGIMRCDIIAEGIVAASRELKGRNIPVVVRL 378

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
            G+  + G R++ ESGL +  A + ++
Sbjct: 379 SGSKEEEGKRILQESGLPLHPARNFEE 405


>gi|332883389|gb|EGK03672.1| succinyl-CoA ligase subunit beta [Dysgonomonas mossii DSM 22836]
          Length = 378

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 229/396 (57%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L   Y +PV + ++      A  A + L     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKELFSSYGIPVKEQILCYEPGEAAVAYEELDTECVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG T+        G  V  V V +  DI  E Y+
Sbjct: 58  -------GGVKLAKSKEEAKDHAKNILGLTI-------KGYPVTKVIVTEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  +   +GG+DIEEVA+  P+KI+K  IDPLIG+          +L   
Sbjct: 104 SFIIDRNTKSVILMMCAEGGVDIEEVAEKTPEKIYKFAIDPLIGLPDYLARKFAFVLFQD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK F DKD SL EINPL+  K+G+L  +D+K++FDDNALYR  +I 
Sbjct: 164 LNQVNQLASILQKLYKLFIDKDASLAEINPLVTTKDGKLLAVDAKMTFDDNALYRQPEIL 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + +E++  E  AK+   S++ LDG IGCMVNGAGLAMATMD+IKLYGGAPANFLD+G
Sbjct: 224 SLFEPTEDEKVETAAKEKGFSFVRLDGEIGCMVNGAGLAMATMDMIKLYGGAPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +KV  A  ++  D  VK +LINIFGGI RCD +  G+LSA +++K +IP+++RL 
Sbjct: 284 GSSNPNKVIDAMTLLLKDPKVKVVLINIFGGITRCDDVASGLLSAFEQLKTDIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++   G     A  + +A +  V A K
Sbjct: 344 GTNEKEGREML--LGTRFKVAETMSEATRMAVAASK 377


>gi|269837811|ref|YP_003320039.1| succinyl-CoA synthetase, beta subunit [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787074|gb|ACZ39217.1| succinyl-CoA synthetase, beta subunit [Sphaerobacter thermophilus
           DSM 20745]
          Length = 379

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 162/379 (42%), Positives = 238/379 (62%), Gaps = 18/379 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQA  +L+ Y +P+ +G+V ++     +A   L G + VVK+Q+H GGRGK    
Sbjct: 1   MNIHEYQAAEILKGYGIPINQGIVATTPDEVAAAAGQLGGTV-VVKAQVHTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +        ILG  +        G  V+ V V  G DI RE YL
Sbjct: 57  -------GGVKLAHSPEEAREVGSRILGMDI-------RGHTVHKVLVAPGVDIAREYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  +  +AS+ GG+DIEEVA++ P+KI +   +P +G        L   L ++
Sbjct: 103 GVVIDRAARGITIMASSAGGVDIEEVARETPEKIHREAANPFLGFHDYQARRLAFKLGIE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   L++AF   D SL EINPL++  +     LDSKI+ DD+AL RH D++
Sbjct: 163 PDLVGGFARIARQLFEAFVQSDASLAEINPLVLTADRTWLALDSKITIDDSALVRHPDLE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+ EE++ E+EA+   +S++ LDGNIGC+VNGAGL+MATMD IK YGG PANFLDVG
Sbjct: 223 QLRDLQEENATELEARAAGISFVKLDGNIGCVVNGAGLSMATMDAIKHYGGEPANFLDVG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V  A +++ +DS+V+ +LINIFGGI RCD + +G+L+A+  VK  +P V+RL 
Sbjct: 283 GGASAEQVEKALRLVLADSNVRAVLINIFGGITRCDEVARGLLAAMDAVKPTVPFVIRLV 342

Query: 361 GANVDIGNRLIAESGLNVI 379
           G N D G R++A++G+ V+
Sbjct: 343 GTNQDEGRRILADAGITVV 361


>gi|328724202|ref|XP_001942971.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 488

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 172/399 (43%), Positives = 250/399 (62%), Gaps = 5/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL+   +PV K  V  +   A   +++L      VK+Q+ AGGRG G FK
Sbjct: 78  LNVHEHVSYSLLKGAGIPVPKFGVAKTGKEAAEIVRSLGLTDIAVKAQVLAGGRGLGHFK 137

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     KGGV++  + +   +   ++LG  LITKQTG  G   N V V +     +E Y 
Sbjct: 138 K---GFKGGVKMVDTAEEAENVSDQMLGDYLITKQTGEKGRICNAVMVAERVYARKEFYF 194

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IE+VA+D P+ I  + ID   G++ E    +   + L 
Sbjct: 195 AVMMERAFGGPVLIASSQGGVNIEKVAEDNPEAILYMPIDITKGISRELALDVITKVGLT 254

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHLDI 239
            + + +  D+   LY  F  KD  L+E+NP       G    LD+K  FDDNA YR  ++
Sbjct: 255 KK-KDETADVILKLYDLFLTKDALLIEVNPYAESISTGGYYCLDAKFRFDDNAEYRQKEL 313

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +LRD ++ED +E+EA + NL+YIALDG IGC+VNGAGLAMATMDII L+GG PANFLDV
Sbjct: 314 FDLRDWTQEDEKEVEASKFNLNYIALDGTIGCLVNGAGLAMATMDIINLHGGFPANFLDV 373

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +V  AFKIITSD  V  I++NIFGGIMRCD++  GI++A +E+ +N+P++ RL
Sbjct: 374 GGGATASQVKEAFKIITSDPKVCAIMVNIFGGIMRCDIIADGIIAAAQELNLNVPIICRL 433

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +G NVD     IA SG+ ++   +LD+AA+  V   + V
Sbjct: 434 QGTNVDEAKLRIANSGMKILPVDNLDEAARLAVKLSEIV 472


>gi|237718598|ref|ZP_04549079.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_2_4]
 gi|229452058|gb|EEO57849.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_2_4]
          Length = 376

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 163/394 (41%), Positives = 227/394 (57%), Gaps = 18/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V  + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDVYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFALFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH +I 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVETDAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N  IG  L+         A  + +AA   + A
Sbjct: 344 GTNEHIGRELLRNHS-RFQIATTMKEAALMALKA 376


>gi|325285020|ref|YP_004260810.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga lytica
           DSM 7489]
 gi|324320474|gb|ADY27939.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cellulophaga lytica
           DSM 7489]
          Length = 396

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 173/405 (42%), Positives = 242/405 (59%), Gaps = 20/405 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASFGVRIQRGIVAHNAQEAVTAAKQLTQETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L  V      I+G  LIT QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLNEVEEIAGNIIGMNLITPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP  G+      
Sbjct: 111 ESETSEFYMSVLLNRATGRNMIMYSTEGGMDIEEVAEKTPHLIFTEEIDPATGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +      +LYKA+ + D S+ EINP++   + ++  +D+K+S DDN
Sbjct: 171 KIAFNLGLSGLAFKEMTKFVASLYKAYVESDSSMFEINPVLKTSDNKIMAVDAKVSIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     E+RD+ EE+  E+EA    L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRRKQYAEMRDLREENPIEVEAGALGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V AAFKII  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAARVEAAFKIILKDPAVKAILINIFGGIVRCDRVAQGVIDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           IN+P+++RL+G N DI   LI  SGL+V +A+   +AA K+   +
Sbjct: 351 INVPIIVRLQGTNADIAKELIDNSGLDVQSAVQFQEAADKVKEVL 395


>gi|282879135|ref|ZP_06287894.1| succinate-CoA ligase, beta subunit [Prevotella buccalis ATCC 35310]
 gi|281298777|gb|EFA91187.1| succinate-CoA ligase, beta subunit [Prevotella buccalis ATCC 35310]
          Length = 382

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 169/396 (42%), Positives = 239/396 (60%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKAL  +Y++PV K V+  +V  A SA ++L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKALFAQYHLPVDKSVLCRTVDEAVSAYQSLGSERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + +     +ILG  +        G  V+ + V +  DI  E Y+
Sbjct: 58  -------GGVKVAKGEEQLREYASQILGMDI-------KGFTVDRILVGEAIDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       + S +GGMDIE VAK+ P+KI K+ IDPLIG+           L   
Sbjct: 104 SIVIDRKVKSAILMLSREGGMDIESVAKNTPEKIHKIPIDPLIGMPDYLAREAAFCLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F NLY+ F +KD SL EINPL++ K+G ++ +D+K++FD+NALYRH D+ 
Sbjct: 164 KALVNQAVPVFQNLYRLFKEKDASLAEINPLVVTKSGEVKAIDAKMTFDNNALYRHPDVF 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + + E+ +E +AK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTAEERKEQDAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ SDS V+ +LINIFGGI RCD + KG++ A K +  ++P+V+RL 
Sbjct: 284 GSSNPTKIVEAMKLLLSDSHVRVVLINIFGGITRCDDVAKGLIEAFKMLDTDMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G     A  + +A +K V   +
Sbjct: 344 GTNEAEGRELLK--GTKFHVAKTMSEAGKKAVELAQ 377


>gi|71663174|ref|XP_818583.1| succinyl-CoA ligase [GDP-forming] beta-chain [Trypanosoma cruzi]
 gi|70883843|gb|EAN96732.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           cruzi]
          Length = 418

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 177/387 (45%), Positives = 260/387 (67%), Gaps = 5/387 (1%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NIHEYQ+KA+L++       G+   ++   E+A+  +     VVKSQI AGGRG G F++
Sbjct: 22  NIHEYQSKAILKEGGCKTEFGIPCRTLEEVEAALGKIKTEKKVVKSQILAGGRGMGTFED 81

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYL 120
                KGGV V  +    +   +++L  TL+TKQTGP G RVN +YV +    I RELYL
Sbjct: 82  ---GFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTGPKGQRVNLLYVTEAVTGIKRELYL 138

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR +    FI S +GGM IEE+A+  P+KI ++ I+   G++ ++  +    L   
Sbjct: 139 ALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKRMRINVQEGISHDNCVAFAKELGFS 198

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  +  +    LY     KD + +EINPL+ ++NG +  +D+K+SFDDNA +R  DI 
Sbjct: 199 GRAAENAAEQVKALYNVGKSKDCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIF 258

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D ++ D +E+ AK+++L+YIALDGN+GC+VNGAGLAMATMD+I + GG PANFLDVG
Sbjct: 259 SLADDTQIDPKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVG 318

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRL 359
           G A ++++ AAF+IIT D  VKGIL+NIFGGIMRCD++ +GI++A +E+K  NIP+V+RL
Sbjct: 319 GSATKEQIVAAFQIITGDEKVKGILVNIFGGIMRCDIIAEGIVAASRELKGRNIPVVVRL 378

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
            G+  + G R++ ESGL +  A + ++
Sbjct: 379 SGSKEEEGKRILQESGLPLHPARNFEE 405


>gi|312374636|gb|EFR22149.1| hypothetical protein AND_15704 [Anopheles darlingi]
          Length = 404

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 177/395 (44%), Positives = 248/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    ++     A+  +K      YV+K+QI AGGRGKG F 
Sbjct: 14  LNLLEYQSKKLLEESGVAIQNFRILEGKQDAD-VLKDFNVNEYVIKAQILAGGRGKGHFD 72

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +      VI  + +++G  LITKQT   G  V  V V D  +I+RE YL
Sbjct: 73  N---GFKGGVHITKDRSQVIPLVEKMVGHRLITKQTPKDGILVKKVMVADSINIVRETYL 129

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P KI  L ID   G+T E    +   LE +
Sbjct: 130 SIVMDRQHNGPVLIASPAGGMDIEAVAEETPDKIKTLPIDITAGITREQSLEVARFLEFR 189

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D    LY  F   D   +EINPL    +GR+  +D+K++F+DNA +R  DI 
Sbjct: 190 GPLLERAADQIVKLYHLFTKVDAVQIEINPLAETDDGRVISVDAKLNFEDNAQFRQKDIF 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +EIEA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 250 AMEVHEDTDPKEIEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI+SA K + + +PL++RLE
Sbjct: 310 GNVKEDQVLKAFQILTSDENVKAILVNVFGGIVNCATIANGIVSATKSMNLKVPLIVRLE 369

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV    +++ +SGL + +A+DLD+AA+K V ++
Sbjct: 370 GTNVTAAKKILEQSGLKIQSAVDLDEAAKKAVASI 404


>gi|118595147|ref|ZP_01552494.1| succinyl-CoA synthase, beta subunit [Methylophilales bacterium
           HTCC2181]
 gi|118440925|gb|EAV47552.1| succinyl-CoA synthase, beta subunit [Methylophilales bacterium
           HTCC2181]
          Length = 389

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 188/397 (47%), Positives = 257/397 (64%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL+ Y +   K VV S+   AE A++ L G  Y +K+QIHAGGRGK    
Sbjct: 1   MNLHEYQAKNLLKIYGINTPKHVVASTTKEAELAVQMLKGNAYAIKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ +         LG  L+T Q  P G  V+ V +E+   I +ELY 
Sbjct: 58  -------GGVKIISTAQEAQDFSEAWLGKNLVTYQNAPLGQPVHRVLIEETVTIKKELYF 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR    +  I S+ GG +IE+++K  P+ I K+        + +DV+S+ D L+++
Sbjct: 111 SLLVDRQLEKITLIFSSAGGTEIEDISKKNPELILKISTSIQKEFSEQDVSSILDKLQMK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             + +    L  N +K F + D+SLLEINPL+I  +  L  LD K+S D NAL++H  I 
Sbjct: 171 ASSMLLFKSLIKNTFKLFTENDLSLLEINPLVITNDNDLVALDCKMSIDSNALFKHPHII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + +D S+ D +E EA    L+YIAL+GNIGCMVNGAGLAMATMD+IKL GG PANFLDVG
Sbjct: 231 DFQDWSQIDHKEAEAHHAGLNYIALEGNIGCMVNGAGLAMATMDLIKLSGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D V+ AFKI+ SD  V+ +L+NIFGGIMRCD++  GI++A+KEV I IP+V+RLE
Sbjct: 291 GSATADTVSKAFKILLSDPKVRVVLVNIFGGIMRCDIIANGIIAAIKEVGIEIPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV++G  ++ +S LN+I+A  L DAA + VH   G
Sbjct: 351 GTNVELGKEILNQSNLNIISAESLTDAATQSVHLASG 387


>gi|149372566|ref|ZP_01891678.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [unidentified eubacterium SCB49]
 gi|149354609|gb|EDM43173.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
           subunit) [unidentified eubacterium SCB49]
          Length = 396

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 174/405 (42%), Positives = 243/405 (60%), Gaps = 21/405 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQAK +L  + V + +G+V ++   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQAKQILNSFGVEIQRGIVATTPEEAVAAAKKLTEDTGTGWHVLKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  SL  V     EI+G  L+T QT   G RV+ + V +     G
Sbjct: 56  -----GGRGKGGGVKLAKSLDDVERIAGEIIGMDLVTPQTSAEGKRVHQILVTEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIE VA++ P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGRNMVMYSTEGGMDIETVAEETPHLIFHEEIDPATGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A          L  A+   D +L EINP++   + ++  +D+K++ D N
Sbjct: 171 KIAFNLGLSGMAFKQMTKFVTALVSAYEKSDSALFEINPVLKTSDDKIIAVDAKVTLDAN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D  E+RD  EE+  E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHKDYIEMRDKREENPVEVEAGEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD ++V AAFK+I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVEAAFKLILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGN 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I +P+++RL+G N DI   LI  SGL+V +AI+  +AA K V AV
Sbjct: 351 IEVPIIVRLQGTNADIAKELIDGSGLDVQSAIEFQEAADK-VQAV 394


>gi|77917863|ref|YP_355678.1| succinyl-CoA synthetase subunit beta [Pelobacter carbinolicus DSM
           2380]
 gi|123575071|sp|Q3A7Y4|SUCC_PELCD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|77543946|gb|ABA87508.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pelobacter
           carbinolicus DSM 2380]
          Length = 388

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 168/392 (42%), Positives = 245/392 (62%), Gaps = 11/392 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK L  +Y +P+ +G +  SV     A +   G   VVK+QIHAGGRGK    
Sbjct: 1   MKLHEYQAKQLFHRYGIPIPEGRLARSVEETGQAARAFAG-RCVVKAQIHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV   +S+    +  + +L  TL+T QTG  G  V  + VE+   + RE+YL
Sbjct: 57  -------GGVARVNSVDQARNIAQRLLQHTLVTAQTGDQGLYVGSLLVEEIVPVAREMYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL +DR +G    IAS  GG+DIE+ A+  P+++ +L IDPL+G+ +     +   L L 
Sbjct: 110 SLTLDRANGRYCLIASPDGGVDIEQTARKTPERVRRLTIDPLVGLRAFHARDIARFLGLD 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  +LY+   +KD SL+EINPL + + GRL  +D+K+S DD+AL+R  ++ 
Sbjct: 170 GPLSAAASKVILSLYRCLLEKDASLVEINPLAVTEEGRLMAMDAKVSIDDSALFRQKEML 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+    E+ A   +++YI +DG IGC+VNGAGLAMAT+D++   GG PANFLDVG
Sbjct: 230 EWLDESQLAPLEVRAAHSDIAYIKMDGCIGCLVNGAGLAMATLDMLSECGGQPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQDKV  AF+I+  D +V+G+L+NIFGGIMRCD++ +G+++A ++V   +P+V+R+ 
Sbjct: 290 GGADQDKVVEAFRILLEDPAVEGVLVNIFGGIMRCDLIAQGLIAAAEQVGCQLPIVVRMA 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           GA  D G  L+ ++ LN+     L  AA  IV
Sbjct: 350 GARRDEGKHLLQQTQLNISWQDGLAAAATAIV 381


>gi|282879726|ref|ZP_06288456.1| succinate-CoA ligase, beta subunit [Prevotella timonensis CRIS
           5C-B1]
 gi|281306395|gb|EFA98425.1| succinate-CoA ligase, beta subunit [Prevotella timonensis CRIS
           5C-B1]
          Length = 382

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 169/396 (42%), Positives = 239/396 (60%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAKAL  +Y++PV K V+  +V  A SA ++L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKALFAQYHLPVDKSVLCRTVDEAVSAYQSLGSERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    + +     +ILG  +        G  V+ + V +  DI  E Y+
Sbjct: 58  -------GGVKVAKGEEQLKEYASQILGMDI-------KGFTVDRILVGEAIDIASEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       + S +GGMDIE VAK+ P+KI K+ IDPLIG+           L   
Sbjct: 104 SIVIDRKVKSAILMLSREGGMDIESVAKNTPEKIHKIPIDPLIGMPDYLAREAAFCLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F NLY+ F +KD SL EINPL++ K+G ++ +D+K++FD+NALYRH D+ 
Sbjct: 164 KALVKQAVPVFQNLYRLFKEKDASLAEINPLVVTKSGEVKAIDAKMTFDNNALYRHPDVF 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + + E+ +E +AK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTAEERKEQDAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ SDS V+ +LINIFGGI RCD + KG++ A K +  ++P+V+RL 
Sbjct: 284 GSSNPTKIVEAMKLLLSDSHVRVVLINIFGGITRCDDVAKGLIEAFKMLDTDMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G     A  + +A +K V   +
Sbjct: 344 GTNEAEGRELLK--GTKFHVAKTMSEAGKKAVELAQ 377


>gi|157110382|ref|XP_001651078.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|157110384|ref|XP_001651079.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108878749|gb|EAT42974.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108878750|gb|EAT42975.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 421

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 176/395 (44%), Positives = 246/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    V+      ES ++      YVVK+QI AGGRGKG F 
Sbjct: 30  LNLLEYQSKKLLAESGVAIQAFRVLEGKKD-ESVLQDFNVNEYVVKAQILAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +      VI  + +++G  LITKQT   G  V  V V D  +I+RE YL
Sbjct: 89  N---GFKGGVHITKDRSQVIPLVEKMVGHRLITKQTPKDGIMVKKVMVADSINIVRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P KI  + +  + G+T      +   LE +
Sbjct: 146 SIVMDREHNGPVLIASPAGGMDIEAVAEETPDKIKTIPVSVVDGITHAQAEEVARFLEFK 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL    +GR+  +D+K++FDDNA +R  DI 
Sbjct: 206 GNLVQKAAAEIEKLYHLFVKVDATQIEINPLAETDDGRVISVDAKLNFDDNAQFRQKDIF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +EIEA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 266 AMDVHEDTDPKEIEAHKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +++V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI++A K + + +PLV+RLE
Sbjct: 326 GNVKEEQVLKAFQILTSDPNVKAILVNVFGGIVNCATIANGIVNATKTIGLKVPLVVRLE 385

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD   +++ ESGL + +A DLD+AA+K V  +
Sbjct: 386 GTNVDAAKKILKESGLKIESAHDLDEAAKKAVKVL 420


>gi|146103993|ref|XP_001469702.1| succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania infantum]
 gi|134074072|emb|CAM72814.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
           infantum JPCM5]
 gi|322503662|emb|CBZ38748.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 413

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 182/397 (45%), Positives = 253/397 (63%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +++     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKQIIKDNGGRVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  VN +YV +    I RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTLYVTEAVAGIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    FI S +GGM IEE+AK +P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    LY     KD +++EINP + ++NG +  +D+K+SFDDNA +R   I
Sbjct: 197 AGETAERAAEQIKALYNIGKSKDCTMVEINPFVELENGDVMEIDAKLSFDDNAAFRQRGI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ DS+E+ AK+H+L+YIALDGN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FALEDQTQIDSKEVLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A + ++ AAFKIIT DS+VK IL+NIFGGIM CDV+ +G+++A K +   IP+V+RL
Sbjct: 317 GGSASEAQIVAAFKIITGDSNVKSILVNIFGGIMHCDVIAQGVVNASKALNTTIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I  SGL +    D D AA+K V   K
Sbjct: 377 CGTNEQRGKEIIRNSGLVIHPVEDFDSAARKAVELAK 413


>gi|322490883|emb|CBZ26147.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Leishmania
           mexicana MHOM/GT/2001/U1103]
          Length = 413

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 181/397 (45%), Positives = 255/397 (64%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +L+     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKQILKDNGGRVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  VN +YV +    I RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTLYVTEAVAGIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    FI S +GGM IEE+AK +P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    +Y     KD +++EINP + ++NG +  +D+K+SFDDNA++R   I
Sbjct: 197 SGETAERAAEQIKAIYNIGKSKDCTMVEINPFVELENGDVMEIDAKLSFDDNAVFRQRGI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D ++ DS+E+ AK+H+L+YIALDGN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FALEDQTQIDSKEVLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A + ++ AAFKIIT D++VK IL+NIFGGIM CDV+ +G+++A K +  +IP+V+RL
Sbjct: 317 GGSASEAQIVAAFKIITGDANVKSILVNIFGGIMHCDVIAQGVVNASKVLNTSIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I  SGL +    D D AA+K V   K
Sbjct: 377 CGTNEQRGKDIIRNSGLVIHPVEDFDSAARKAVELAK 413


>gi|219117017|ref|XP_002179303.1| beta chain succinyl-coa synthetase synthetase [Phaeodactylum
           tricornutum CCAP 1055/1]
 gi|217409194|gb|EEC49126.1| beta chain succinyl-coa synthetase synthetase [Phaeodactylum
           tricornutum CCAP 1055/1]
          Length = 443

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 173/404 (42%), Positives = 244/404 (60%), Gaps = 12/404 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI----KTLPGPL--YVVKSQIHAGGR 54
           +N+HEY +  +++ + +   +  V S+   AE+           P    V+K+Q+ +GGR
Sbjct: 25  LNVHEYISMEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGAPKKDIVIKAQVLSGGR 84

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           G G FK      KGGV + +           +LG+ L+TKQ  P G   N V + +   +
Sbjct: 85  GLGTFKN---GFKGGVHMVTKPGQAREFAAAMLGNELVTKQ-APNGIVCNKVLLMERMYM 140

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            RE+YLS+L+DR S     +AS +GG  IE+VA   P+ IF   ID   G+T E    + 
Sbjct: 141 RREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMA 200

Query: 175 DMLELQGQAR--IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L L+  +        L  NLY  F   D + +E+NPL     G + V D+K++FDDNA
Sbjct: 201 SNLGLEEGSTGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNA 260

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R   I   RD S+ED RE++A +++L+YI L+G IGCMVNGAGLAM+TMDII+L GG+
Sbjct: 261 EFRQSSIFARRDTSQEDVREVDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKGGS 320

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGGGA++ +V  AF+I+ SDS VK IL+NIFGGIMRCDV+  GI++A KE+ IN
Sbjct: 321 PANFLDVGGGANETQVQKAFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIGIN 380

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            P+V+RL+G NV+    LI   G  +I A DL+DAA+K V   +
Sbjct: 381 KPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAAEKAVGVAE 424


>gi|160884542|ref|ZP_02065545.1| hypothetical protein BACOVA_02527 [Bacteroides ovatus ATCC 8483]
 gi|260174865|ref|ZP_05761277.1| succinyl-CoA synthetase beta chain [Bacteroides sp. D2]
 gi|315923110|ref|ZP_07919350.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D2]
 gi|156110281|gb|EDO12026.1| hypothetical protein BACOVA_02527 [Bacteroides ovatus ATCC 8483]
 gi|313696985|gb|EFS33820.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D2]
          Length = 376

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 162/394 (41%), Positives = 226/394 (57%), Gaps = 18/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVIAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFSLFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH ++ 
Sbjct: 164 MEQAGKMAAILQELYKIFMENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEVH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ALFDPTEEERIEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  NIP+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N  IG  L+         A  + +AA   + A
Sbjct: 344 GTNEHIGRELLRNYS-RFQIATTMKEAALMALKA 376


>gi|88802763|ref|ZP_01118290.1| Succinyl-CoA synthetase, beta subunit [Polaribacter irgensii 23-P]
 gi|88781621|gb|EAR12799.1| Succinyl-CoA synthetase, beta subunit [Polaribacter irgensii 23-P]
          Length = 398

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 169/406 (41%), Positives = 240/406 (59%), Gaps = 22/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V S+   A  A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRIQRGIVASNHKEAVDAAKQLTAETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V S   +I+G  L+T QT   G  VN V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVESIANDIIGMMLVTPQTSAEGKLVNQVLVCEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R SG    + ST+GGMDIE VA++ P  IF   +DPL+G+      
Sbjct: 111 DSEPEEYYMSVLLNRASGKNMIMYSTEGGMDIETVAEETPHLIFTEEVDPLLGLMPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D ++ EINP++   + ++  +D+K+S D+N
Sbjct: 171 KIAFNLGLSGTAFKEMTKFVTALYTAYIKSDSAMFEINPVLKTSDDKIMAVDAKVSLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RD+ EE+  E+EAK   L+Y+ LDGN+GCMVNGAGLAM TMD+IK  GG
Sbjct: 231 ALYRHRDYAAMRDLREENPIEVEAKAAGLNYVDLDGNVGCMVNGAGLAMGTMDLIKESGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF II  D +VK IL+NIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAQRVEIAFGIILKDKNVKAILVNIFGGIVRCDRVAQGVVDAYKSMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            IN+P++ RL+G N      LI  SG+ +I+A +  +A+ K V AV
Sbjct: 351 RINVPIICRLQGTNAKEAKELIDNSGMKIISATEFQEASDK-VQAV 395


>gi|163846696|ref|YP_001634740.1| succinyl-CoA synthetase subunit beta [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524503|ref|YP_002568974.1| succinyl-CoA synthetase subunit beta [Chloroflexus sp. Y-400-fl]
 gi|189046907|sp|A9WJ74|SUCC_CHLAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778436|sp|B9LB77|SUCC_CHLSY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|163667985|gb|ABY34351.1| succinyl-CoA synthetase, beta subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448382|gb|ACM52648.1| succinyl-CoA synthetase, beta subunit [Chloroflexus sp. Y-400-fl]
          Length = 380

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 240/398 (60%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ LL ++ +PV  G V  +   A +    + GP+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +        R+ILG  +        G  V  V V +     RELYL
Sbjct: 57  -------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
           S ++DR S  V  IAS +GG++IEEVAK  P  I K+   P +G+       L   + L 
Sbjct: 103 SAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLN 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+AF + D SL+EINPL++  +G L  LDSKI  D++AL+RH D+
Sbjct: 163 DGKQARQFAQIASALYRAFVECDASLVEINPLVVKADGSLLALDSKILLDESALFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D S E   E  A++  ++YI LDGNIGCMVNGAGLAMATMD+IKL GG PANFLD+
Sbjct: 223 AALHDPSAEPEAERRAREAGITYIKLDGNIGCMVNGAGLAMATMDVIKLSGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV AA +II SD +VK +L NIFGGI R D + +GI++A++EV  ++P+V RL
Sbjct: 283 GGGAGKEKVKAALQIILSDPNVKAVLFNIFGGITRVDEVARGIIAALEEVPTDVPMVARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N + G  L+AES L  I A  L + AQK V A +G
Sbjct: 343 VGTNEEAGRALLAESKL--IPAATLAEGAQKAVAAARG 378


>gi|156380885|ref|XP_001631997.1| predicted protein [Nematostella vectensis]
 gi|156219047|gb|EDO39934.1| predicted protein [Nematostella vectensis]
          Length = 436

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 173/396 (43%), Positives = 242/396 (61%), Gaps = 7/396 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY----VVKSQIHAGGRGK 56
           +++HE+ +  +L+   +   KG V  +   A      L         VVK+Q+ AGGRGK
Sbjct: 22  LSVHEHHSMKILQDAGILTPKGGVARTAEQAYEIATVLGESEVEGDMVVKAQVLAGGRGK 81

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G+F+      KGGVR+  S          ++G  L TKQTG  G   N V+V +     R
Sbjct: 82  GKFE---GGLKGGVRIVFSADEAKEVASRMIGKKLFTKQTGELGRVCNEVFVCERLYARR 138

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y +L ++R       + S QGG+DIE VAK+ P  I K  +D + G+  ++  +    
Sbjct: 139 EYYFALALERKYQGPVLVGSQQGGVDIESVAKETPDAIIKQPVDIISGLKIDEARTFARR 198

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +           D    +Y  F  +D  LLEINP+     GR+  +D K+ FDDNA YR 
Sbjct: 199 MGFSPSCVDQAADWMMRMYDIFMSRDAVLLEINPMSEDLLGRVVCMDCKLLFDDNASYRQ 258

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++ +LRD S++D RE+EA +HNL+YI LDG+IGC+VNGAGLAMATMDII+L+GG PANF
Sbjct: 259 QEVFDLRDWSQDDPREVEAAKHNLNYIGLDGSIGCLVNGAGLAMATMDIIQLHGGEPANF 318

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GGGA  ++V AAFKIIT DS V  IL+NIFGGIMRCD++ +GI++A KE+ ++IP+V
Sbjct: 319 LDIGGGASIEQVEAAFKIITEDSKVHAILVNIFGGIMRCDIIAEGIIAAAKELNLSIPIV 378

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           +RL+G  V+    LIA SGL +I   DL+DAA+ +V
Sbjct: 379 VRLQGTRVEDAKALIAASGLRIIACDDLEDAAEMVV 414


>gi|320103226|ref|YP_004178817.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Isosphaera
           pallida ATCC 43644]
 gi|319750508|gb|ADV62268.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Isosphaera
           pallida ATCC 43644]
          Length = 422

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 192/409 (46%), Positives = 250/409 (61%), Gaps = 23/409 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+     V  G   +S   A      L G L VVK+Q+HAGGRGKG   
Sbjct: 1   MNIHEYQAKALLKAAGAAVPAGEPATSAEEAARIYDVLGGGLMVVKAQVHAGGRGKGVAV 60

Query: 61  E-----------------------LPADSKGGVRVESSLKSVISDIREILGSTLITKQTG 97
           +                        P   + GV++  S +        +LG+TL+T QTG
Sbjct: 61  KPSDPSNPVADLATAYEIACGRAAAPEGVRRGVKLVRSREEARQVAEGLLGATLVTYQTG 120

Query: 98  PTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
           P+GS V+ V V  G DI RELYL + VDRT      IAST+GG+DIE VA   P+KI + 
Sbjct: 121 PSGSPVHTVLVTVGHDIDRELYLGMTVDRTLKCPVLIASTEGGVDIETVAAQTPEKIHRE 180

Query: 158 LIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ID  + +       +   L L G A  +G      L   F DKD++L EINPLI+ K+ 
Sbjct: 181 PIDVGLRLRDFQARKVARALGLTGAAAKNGQKFLAALVDLFLDKDVALAEINPLIVTKDH 240

Query: 218 RLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAG 277
           ++  LD+KISFDDNAL+RH +I  +RDV EED  E+ A Q  LSY++LDG+I C+VNGAG
Sbjct: 241 QVLALDAKISFDDNALFRHPEIAAMRDVQEEDPAELRAAQAGLSYVSLDGDIACLVNGAG 300

Query: 278 LAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDV 337
           LAM+TMDIIK +GGAPANFLDVGGGA +++V   F+I+ +   VK +L+NIFGGIMRCD 
Sbjct: 301 LAMSTMDIIKYHGGAPANFLDVGGGASKEQVQEGFRILLASPRVKAVLVNIFGGIMRCDT 360

Query: 338 LVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +   +L+A  E++ N+PLV+RLEG NV  G  L+ +SG  +ITA  L D
Sbjct: 361 IAGALLAAYDELQFNLPLVVRLEGTNVKEGKALLEQSGRPIITADGLTD 409


>gi|307566427|ref|ZP_07628862.1| succinate-CoA ligase, beta subunit [Prevotella amnii CRIS 21A-A]
 gi|307344852|gb|EFN90254.1| succinate-CoA ligase, beta subunit [Prevotella amnii CRIS 21A-A]
          Length = 377

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 176/396 (44%), Positives = 239/396 (60%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +   Y +PV + ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEFQAKKIFADYGLPVERSILCKTPDEAVAAYKQLCVKKVVVKAQVHIGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+ K V      ILG  +        G  V  + V +  DI  E Y 
Sbjct: 58  -------GGVKLCSNEKEVREHATAILGMNI-------KGYTVEKILVGEAVDISAEYYT 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDRT+     + S  GGMDIE+VAKD P+KI K++IDPLIG++          L   
Sbjct: 104 SILVDRTTKCPILMLSRSGGMDIEQVAKDTPEKIAKIVIDPLIGLSDYVAREAAFKLFDN 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       LF NLY+ F DKD SL EINPL+ + +G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MEQVKQAVPLFKNLYRLFVDKDASLAEINPLVKLSDGTLKAIDAKMTFDDNALFRHSDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + +EE+ +E  AK+   SY+ L GNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTEEEKKERAAKEKGFSYVNLGGNIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  VK +LINIFGGI RCD + KG+L A K ++ +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVAKGLLEAFKIIQTDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G +      + DA  K V   K
Sbjct: 344 GTNEKEGRALLE--GTHFTVGKSMADAGHKAVELSK 377


>gi|293370303|ref|ZP_06616860.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CMC 3f]
 gi|292634598|gb|EFF53130.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CMC 3f]
          Length = 376

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 161/394 (40%), Positives = 226/394 (57%), Gaps = 18/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFSLFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH ++ 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEVH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N  IG  L+         A  + +AA   + A
Sbjct: 344 GTNEHIGRELLRNYS-RFQIATTMKEAALMALKA 376


>gi|145346224|ref|XP_001417593.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577820|gb|ABO95886.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 420

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 178/391 (45%), Positives = 258/391 (65%), Gaps = 5/391 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEYQ   +++K+ V V  G    ++   + A + + G   VVKSQI AGGRG G F 
Sbjct: 28  LHVHEYQGAEIMKKFGVRVPIGAACGTLDEVDDAARAMRGDEVVVKSQILAGGRGLGTF- 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV    +         ++LG TL+TKQ+GP G  VN VYV +   + RE+Y 
Sbjct: 87  --ASGFEGGVHAV-AKTRARETAAKMLGGTLVTKQSGPAGKPVNVVYVAEKMTLTREMYF 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR S     IAS +GG  IE++A+ +P+KI K+ +D   G+T      L   L + 
Sbjct: 144 AITLDRASAGPLVIASAEGGTSIEDLAQSHPEKIIKMRLDIERGMTKTQADELVKRLGIL 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +       LY+ F   D +++E+NPL   ++GR+   D+K++FDDNA YR  ++ 
Sbjct: 204 KH-VDEAAKQLMGLYETFSKTDCTMIEVNPLAEDQDGRVVAADAKLNFDDNAEYRQSELF 262

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S+ED RE++A + +L+YI LDGNIGCMVNGAGLAMATMDII+LYGG+PANFLDVG
Sbjct: 263 SLRDTSQEDPREVQASKFDLNYIGLDGNIGCMVNGAGLAMATMDIIQLYGGSPANFLDVG 322

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A +++V  AFKI+T+D  V+ IL+NIFGGIM+CDV+  GI++A K+V + +PL++RLE
Sbjct: 323 GNASEEQVVEAFKILTADPKVQAILVNIFGGIMKCDVIAAGIVAAAKQVDLKVPLIVRLE 382

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G NV+ GN+++  SG+ ++TA DLDDAAQK 
Sbjct: 383 GTNVEAGNKILKSSGMTIVTAEDLDDAAQKA 413


>gi|83286160|ref|XP_730040.1| succinyl-coa ligase subunit beta, hydrogenosomal precursor
           [Plasmodium yoelii yoelii str. 17XNL]
 gi|23489549|gb|EAA21605.1| succinyl-coa ligase beta-chain, hydrogenosomal precursor
           [Plasmodium yoelii yoelii]
          Length = 458

 Score =  418 bits (1074), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/400 (41%), Positives = 251/400 (62%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI---KTLPGPL-YVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +   AE      + + G +  V+K+QI +GGRG 
Sbjct: 46  LSIHEYLSIDLLRNNNIPCPQGFHAQTPEEAEEKALELQNICGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPDGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE+++K  P+ I+K+ I+   G+T       C+ 
Sbjct: 164 ERYVAFLLDRNSDSICLLGSSVGGSSIEDISKKTPEAIYKININIKDGLTDGQSREFCEQ 223

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +G       D+  NLYK F   D +LLEINPL    +GR+   D+K++FDDNA YR 
Sbjct: 224 IGFKGNELDMATDMVVNLYKIFKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEYRQ 283

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E RD+++E+  E+EAK++NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 284 KEIFEKRDLTQENPEELEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNF 343

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A + ++A A KII ++   K   INI GGIMRCD++ +GI++A K++K   PL+
Sbjct: 344 LDVGGSATETEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIKFKKPLI 403

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG N     ++I ES +  I   D++ AA+K V   +
Sbjct: 404 IRLEGTNEKEAIKIIEESKIKCIICQDMNLAAEKAVALAE 443


>gi|148658028|ref|YP_001278233.1| succinyl-CoA synthetase subunit beta [Roseiflexus sp. RS-1]
 gi|189081790|sp|A5V080|SUCC_ROSS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|148570138|gb|ABQ92283.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Roseiflexus sp.
           RS-1]
          Length = 379

 Score =  418 bits (1074), Expect = e-115,   Method: Composition-based stats.
 Identities = 167/398 (41%), Positives = 244/398 (61%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ +L +Y +PV  G V ++   A +  + + G + VVK+Q+  GGRGK    
Sbjct: 1   MKLHEYQARDILARYGIPVTGGGVATTPAEARTIAEQIGGRV-VVKAQVFVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G  V  V V +     RE+YL
Sbjct: 57  -------GGVKLADTPEQAEQVASQILGMNI-------KGLTVEKVLVAEAITYEREIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
             ++DR S  +  +AS +GG++IEEVA+  P+ I K+   P++G+       L   + L 
Sbjct: 103 GAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMMGLLDFQARDLAYGIGLT 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+A+ D D SL EINPL++  +G L+ LDSKI  DD+ L+RH D+
Sbjct: 163 DGRQARQFAQIATALYRAYMDVDASLAEINPLVVRADGSLQALDSKIVLDDSGLFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           + +RD S+E   E  A++  ++YI LDGNIGCMVNGAGLAMATMD++KLYGG PANFLD+
Sbjct: 223 EAMRDSSDEPEAEQRAREAGITYIKLDGNIGCMVNGAGLAMATMDVVKLYGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV  A +II SD +VK ++ NIFGGI R D + KGI++A++EV  ++P++ RL
Sbjct: 283 GGGAGKEKVKTALQIILSDPNVKAVMFNIFGGITRVDEVAKGIIAALEEVNTDVPMIARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N + G R++AES L  I A  L +AA+K V A + 
Sbjct: 343 VGTNEEEGRRILAESAL--IPAATLAEAAEKAVQAAQS 378


>gi|298484467|ref|ZP_07002621.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. D22]
 gi|298269376|gb|EFI10983.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. D22]
          Length = 376

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/394 (41%), Positives = 226/394 (57%), Gaps = 18/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRSAFTLFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH +I 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N  IG  L+         A  + +AA   + A
Sbjct: 344 GTNEHIGRELLRNYS-RFQIATTMKEAALMALKA 376


>gi|237713287|ref|ZP_04543768.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D1]
 gi|262406574|ref|ZP_06083123.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_22]
 gi|294647281|ref|ZP_06724876.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CC 2a]
 gi|294808526|ref|ZP_06767274.1| succinate-CoA ligase, beta subunit [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446754|gb|EEO52545.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. D1]
 gi|262355277|gb|EEZ04368.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_22]
 gi|292637357|gb|EFF55780.1| succinate-CoA ligase, beta subunit [Bacteroides ovatus SD CC 2a]
 gi|294444259|gb|EFG12978.1| succinate-CoA ligase, beta subunit [Bacteroides xylanisolvens SD CC
           1b]
 gi|295084310|emb|CBK65833.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bacteroides
           xylanisolvens XB1A]
          Length = 376

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 161/394 (40%), Positives = 224/394 (56%), Gaps = 18/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    +   ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAMNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFTLFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH +I 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+ KLYGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMTKLYGGQPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N  IG  L+         A  + +AA   + A
Sbjct: 344 GTNEHIGRELLRNYS-RFQIATTMKEAALMALKA 376


>gi|195014872|ref|XP_001984094.1| GH16246 [Drosophila grimshawi]
 gi|193897576|gb|EDV96442.1| GH16246 [Drosophila grimshawi]
          Length = 420

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 179/386 (46%), Positives = 250/386 (64%), Gaps = 6/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+Q+K LL+KY V + +  V+ +  + +  +++   P YVVK+QI AGGRGKG F 
Sbjct: 28  LNLLEFQSKDLLQKYGVAIQQFKVLDNTSSDKQVVQSFDCPEYVVKAQILAGGRGKGTFD 87

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV + S+   V+S  ++++G+ LITKQT  +G  VN V V    +I RE Y+
Sbjct: 88  N---GFKGGVHITSNKGDVLSLSKQMIGNRLITKQTPKSGILVNKVMVARSVNITRETYI 144

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             L+DR       IAS  GGMDIE VA++ P+KI  + +D    +    +  +   LE +
Sbjct: 145 CFLLDREHNGPVLIASPAGGMDIEAVAQETPEKIKTVPLDIGKPIPEATLLEVARFLEFK 204

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A     D    LY  F   D   +EINPL    +G +  +D+K++FDDNA +R  DI 
Sbjct: 205 GDAVKRCADEIQKLYTLFKAVDALQIEINPLAETDSGEVISVDAKLNFDDNAQFRQKDIF 264

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + DV+EE  D RE+EA ++NL+Y+A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLD
Sbjct: 265 AM-DVTEEEADPREVEANKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLRGGEPANFLD 323

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG   +D+VA AF+I+TSD  VKGIL+N+FGGI+ C  +  GI++A K++K+N+PLV+R
Sbjct: 324 VGGSVKEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNVPLVVR 383

Query: 359 LEGANVDIGNRLIAESGLNVITAIDL 384
           LEG NV     ++  SGL + TA DL
Sbjct: 384 LEGTNVTKAREILKNSGLPIQTACDL 409


>gi|317419039|emb|CBN81077.1| 'Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial'
           [Dicentrarchus labrax]
          Length = 383

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 161/375 (42%), Positives = 221/375 (58%), Gaps = 3/375 (0%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +++  V V +  V  +   A  A K L     V+K+QI AGGRGKG F    +  KGGV 
Sbjct: 1   MQESGVAVQRFYVADTASEALDAAKRLNAKEIVLKAQILAGGRGKGVFD---SGLKGGVH 57

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +      V     ++LG  L TKQT   G +V  V V +  DI RE Y ++L+DR+    
Sbjct: 58  LTKDPAVVGELANKMLGYNLTTKQTPKDGVKVKTVMVAEALDISRETYFAILMDRSCNGP 117

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             + S QGGMDIEEVA   P+ IFK +ID   GV  +    +   L  +G  +    D  
Sbjct: 118 VMVGSPQGGMDIEEVAASTPELIFKEVIDIFQGVQDDQALRMAANLGFKGPLQRQAADQI 177

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LY  F   D + +E+NPL     G++   D+KI+FDDNA +R   +  + D++E D  
Sbjct: 178 KRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVFAMDDMTESDPT 237

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E EA + +L YI LDGNI C VNGAGLAMAT DII L+GG PANFLD+GGG  + +V  A
Sbjct: 238 ETEAAKWDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKERQVYEA 297

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    R++
Sbjct: 298 FKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAKRIL 357

Query: 372 AESGLNVITAIDLDD 386
            ESGL +  A +LDD
Sbjct: 358 TESGLPITAAENLDD 372


>gi|261856574|ref|YP_003263857.1| succinyl-CoA synthetase subunit beta [Halothiobacillus neapolitanus
           c2]
 gi|261837043|gb|ACX96810.1| succinyl-CoA synthetase, beta subunit [Halothiobacillus
           neapolitanus c2]
          Length = 401

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 183/387 (47%), Positives = 247/387 (63%), Gaps = 15/387 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL---YVVKSQIHAGGRGKG 57
           MN+HEYQAKALL  ++VPVA G+VI+    A++A   LP      +V+K+QIH+G RGK 
Sbjct: 1   MNLHEYQAKALLTGFSVPVATGLVINHP--AQAADDQLPPSDDQRWVLKAQIHSGARGKA 58

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV +  S   + +   E+LG TL+T QTGPTG  V+ + +E  + I +E
Sbjct: 59  ----------GGVLIADSPDDIRAKAAELLGKTLVTHQTGPTGLPVHQLLIEPASAITQE 108

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           LYL++ +DR    V  IAS  GGMDIE+V+ ++P  IF+L I+P +G+       L   L
Sbjct: 109 LYLAMTIDRQRQRVVVIASQHGGMDIEQVSAEHPDAIFRLYINPTVGLMGYQARRLGFAL 168

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            L   A      L   +Y AF   D  L+EINPL +  +  L  +D+KI+ D NA YR  
Sbjct: 169 GLSDTALKQFPALLRGVYDAFIKNDADLIEINPLAVTADNTLLAVDAKIAIDGNAAYRQK 228

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            +   RDV++ED  E+ A+   L+YI+L G I CMVNGAGLAMATMD+I+  GG+PANFL
Sbjct: 229 ALFATRDVTQEDPTEVAAQASGLNYISLTGEIACMVNGAGLAMATMDLIQSAGGSPANFL 288

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           DVGGG   +KVAAAFK+I ++  VK IL+NIFGGI+RCD++  GI++A  EV + +P V+
Sbjct: 289 DVGGGTSTEKVAAAFKLILANPRVKAILVNIFGGIVRCDLIANGIIAAAHEVGLTLPTVV 348

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDL 384
           RLEG N   G RL+AESGLN+I   DL
Sbjct: 349 RLEGTNAAEGRRLLAESGLNLIAENDL 375


>gi|74191221|dbj|BAE39440.1| unnamed protein product [Mus musculus]
          Length = 384

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 161/375 (42%), Positives = 223/375 (59%), Gaps = 3/375 (0%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + ++ V V +  V ++   A  A K L     V+K+QI AGGRGKG F    +  KGGV 
Sbjct: 1   MSEHGVRVQRFFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF---NSGLKGGVH 57

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +    K V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+    
Sbjct: 58  LTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGP 117

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +    D  
Sbjct: 118 VIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQI 177

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  
Sbjct: 178 TKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPI 237

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  A
Sbjct: 238 ENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYEA 297

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FK++TSD  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV     ++
Sbjct: 298 FKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQNIL 357

Query: 372 AESGLNVITAIDLDD 386
             SGL + +A+DL+D
Sbjct: 358 KSSGLPITSAVDLED 372


>gi|28422556|gb|AAH47024.1| Succinate-CoA ligase, GDP-forming, beta subunit [Homo sapiens]
 gi|133777003|gb|AAH07716.3| Succinate-CoA ligase, GDP-forming, beta subunit [Homo sapiens]
          Length = 384

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 160/375 (42%), Positives = 221/375 (58%), Gaps = 3/375 (0%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +    V V +  V  + + A  A K L     V+K+QI AGGRGKG F    +  KGGV 
Sbjct: 1   MSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF---NSGLKGGVH 57

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +      V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+    
Sbjct: 58  LTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGP 117

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +    D  
Sbjct: 118 VLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQI 177

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  
Sbjct: 178 TKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPI 237

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  A
Sbjct: 238 ENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQA 297

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++
Sbjct: 298 FKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKIL 357

Query: 372 AESGLNVITAIDLDD 386
             SGL + +AIDL+D
Sbjct: 358 NNSGLPITSAIDLED 372


>gi|116327602|ref|YP_797322.1| succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116331787|ref|YP_801505.1| succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|122280476|sp|Q04QS3|SUCC_LEPBJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|122284601|sp|Q053V6|SUCC_LEPBL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116120346|gb|ABJ78389.1| Succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116125476|gb|ABJ76747.1| Succinyl-CoA synthetase, beta subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 390

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 185/400 (46%), Positives = 250/400 (62%), Gaps = 14/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAA----ESAIKTLPGPLYVVKSQIHAGGRGK 56
           M IHEYQAK +LR++   V  G+VI     A    +       G + VVK+QIHA     
Sbjct: 1   MKIHEYQAKEILRRHKANVPFGIVIDKKENASKAHDEVTSKTGGSVVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV+V  + +   + + +ILG  LIT QTGP G +V  VY+E G DI +
Sbjct: 56  -----GGRGKGGGVKVTKTKEDATAAVDKILGMQLITPQTGPEGKKVLKVYLEQGIDIAK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS+L+DR+      +AST+GGM+IEEVA+ +P+KI K+ +DP IG+       L   
Sbjct: 111 EYYLSILLDRSIRKTILMASTEGGMEIEEVAETHPEKILKIAVDPGIGLQVNQARQLAFE 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L  ++      L   +Y A+  +D SLLEINPLI+ K   +   D KI  D+NALYRH
Sbjct: 171 LGLPAESHKSFQSLVMAIYDAYIKEDASLLEINPLILTKQNEIIAGDCKIDLDENALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D    RD++EED  E++A + NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANF
Sbjct: 231 ADNAAFRDITEEDPLEVQASEFNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA++  V   FKII  D +VKGI +NIFGGI+RCD++ +GI+ A K V + +PLV
Sbjct: 291 LDVGGGANKTTVTNGFKIILGDPNVKGIFVNIFGGIVRCDMVAEGIIEAAKAVDLKVPLV 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RL+G N ++G  ++ +SGL +    DL +AA  I   +K
Sbjct: 351 VRLQGTNSELGREVLNKSGLKITGVDDLREAASTIAKLIK 390


>gi|167518784|ref|XP_001743732.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777694|gb|EDQ91310.1| predicted protein [Monosiga brevicollis MX1]
          Length = 455

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 172/375 (45%), Positives = 237/375 (63%), Gaps = 3/375 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HE  +  LLR ++V V KG    S   A    K +     V+K+Q+ AGGRGKG F 
Sbjct: 29  LHLHEVDSMDLLRSFDVSVGKGDRAFSSDEAVQVAKQMSTDKVVIKAQVLAGGRGKGHFD 88

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV V      + S    ++G  LITKQT   G   N V + +  DI +E Y 
Sbjct: 89  N---GFQGGVHVVKGEDEIRSAADNMIGHRLITKQTDEHGRPCNMVQIAECMDIDKEFYF 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+DR+ G    + S+QGGMDIE VA+  P  I K+ +D   G++++    +   +   
Sbjct: 146 ALLMDRSMGGPCIVGSSQGGMDIEAVAEATPDAIIKVPVDIKEGLSTDKAIQVAKDMGFA 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       NLY  F +KD +L+EINPL+  K G +  LD+K++FDDNA +R  D+ 
Sbjct: 206 DDIAPKAAQEMINLYTLFLEKDCTLVEINPLVQTKGGDVMCLDAKVNFDDNAGFRQKDVF 265

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RDVS+E++ ++EA +++L+YI LDG IGC+VNGAGLAMATMDII+LYGG PANFLDVG
Sbjct: 266 EKRDVSQENAADVEAAKYDLNYIDLDGTIGCLVNGAGLAMATMDIIQLYGGRPANFLDVG 325

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V AAFK+ITSD SV  IL+NIFGGIMRCDV+ +GI+ A  E+ +N+P+V+RL+
Sbjct: 326 GGATAEQVTAAFKLITSDPSVSAILVNIFGGIMRCDVIAEGIIEAASELHLNVPIVVRLQ 385

Query: 361 GANVDIGNRLIAESG 375
           G        LIAESG
Sbjct: 386 GTRKAEAKALIAESG 400


>gi|51244136|ref|YP_064020.1| succinyl-CoA synthetase, beta chain [Desulfotalea psychrophila
           LSv54]
 gi|81643213|sp|Q6ARL2|SUCC_DESPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|50875173|emb|CAG35013.1| probable succinyl-CoA synthetase, beta chain [Desulfotalea
           psychrophila LSv54]
          Length = 386

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 182/391 (46%), Positives = 261/391 (66%), Gaps = 11/391 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L RKY++PV +G++ +++   ++A+K+L  P+ V K+QIHA         
Sbjct: 1   MKIHEYQAKQLFRKYSIPVPEGLLCTNLQEVKTALKSLQLPIAV-KAQIHA--------- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V+    +ILG +L+T QTGP+G  V+ + +E+G  I RELYL
Sbjct: 51  -GGRGKGGGVKLGKTATEVVQYADDILGMSLVTAQTGPSGRTVSKILLEEGVSIARELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR    +  IA   GGM+IEEVA   P++I K+ I+PLIG  S  +    + L + 
Sbjct: 110 SILVDRERACITIIACQDGGMNIEEVAASTPERIGKIHINPLIGPRSYHINQAREWLNIA 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LYK F D D S++EINPLII ++ +L  LD+K+  D NAL+R  ++Q
Sbjct: 170 QEQARAFSLFIHALYKLFLDYDCSMVEINPLIITEDNQLIALDAKVDTDSNALFRQRELQ 229

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ D +E+D  E EA + NL+YI L GN+G MVNGAGLAMATMDIIK  G  PANFLDVG
Sbjct: 230 KMHDPAEDDPAEAEAAKFNLNYIKLSGNVGNMVNGAGLAMATMDIIKRAGAEPANFLDVG 289

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD +++   F+II +D++VK ILINIFGGI+RCD+L +G++ A  +V + +P+V+R+E
Sbjct: 290 GSADAERIENGFRIILADTNVKAILINIFGGILRCDILAQGVVQAAAKVSLQVPVVIRME 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G NV  G  ++A+SGL++I A DL+DAA+KI
Sbjct: 350 GTNVKEGREILAKSGLSLINATDLNDAAEKI 380


>gi|154345998|ref|XP_001568936.1| succinyl-CoA ligase [GDP-forming] subunit beta [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134066278|emb|CAM44069.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 413

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 178/397 (44%), Positives = 251/397 (63%), Gaps = 4/397 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NIHEYQ+K +++     V  G+   ++   E+A   +     VVKSQI AGGRGKG FK
Sbjct: 20  LNIHEYQSKKIIKDNGGKVEFGIACKTIEEVEAACAKIKTEKKVVKSQILAGGRGKGVFK 79

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELY 119
           +     +GGV V  S  + +   + +LG+TL+TKQTGP G  V+ +YV +   DI RELY
Sbjct: 80  D---GFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVSTLYVTEAIADIKRELY 136

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LSL++DR S    F+ S +GG  IEE+AK  P+KI  + ++   GV  +   +    L  
Sbjct: 137 LSLILDRKSASPMFVGSAEGGTSIEELAKTNPEKIKTMKVNVAEGVDHDAAVAYAKELGF 196

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+      +    LY      D +++EINP + +KNG +  +D+K+SFDDNA +R   I
Sbjct: 197 SGETAEHAAEQIKTLYNIGKSNDCTMVEINPFVELKNGDVMEIDAKLSFDDNAAFRQKAI 256

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             L D +  DS+E+ AK+H+L+YIAL+GN+GC+VNGAGLAMATMD I L+GG+ ANFLD 
Sbjct: 257 FSLEDQTMIDSKEVLAKKHDLNYIALEGNVGCLVNGAGLAMATMDAISLHGGSAANFLDA 316

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A + ++ +AFKIIT D  VK IL+NIFGGIM CDV+ +G+++A K +   IP+V+RL
Sbjct: 317 GGSASEAQIVSAFKIITGDPHVKSILVNIFGGIMHCDVIAQGVVNASKTLSTTIPIVVRL 376

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G  +I+ SGL + +A D D AA+K V   K
Sbjct: 377 CGTNEQRGKDIISNSGLAIHSADDFDSAARKAVELAK 413


>gi|29346198|ref|NP_809701.1| succinyl-CoA synthetase beta chain [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568370|ref|ZP_04845781.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 1_1_6]
 gi|81445237|sp|Q8A9M7|SUCC_BACTN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29338093|gb|AAO75895.1| succinyl-CoA synthetase beta chain [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251842443|gb|EES70523.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 1_1_6]
          Length = 376

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 159/393 (40%), Positives = 223/393 (56%), Gaps = 18/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +   A +A K +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGAVAAYKRMGSDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +    + + ILG ++        G  VN + V +  DI  E Y+
Sbjct: 58  -------GGVKLVDNTEDTYQEAKNILGMSI-------KGLPVNQILVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  IDP IG+           L   
Sbjct: 104 SFTIDRNTRSVILMMSASGGMDIEEVARQSPEKIIRYAIDPFIGLPDYLARRFAFSLFPH 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL +   G L  +D+KI FDDNALYRH D+ 
Sbjct: 164 IEQAGRMAAILQALYKIFMENDASLVEVNPLALTAKGILMAIDAKIVFDDNALYRHPDVL 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKL+GG PANFLD+G
Sbjct: 224 SLFDPTEEEKVEADAKNKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLHGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G++ A  ++K +IP+++RL 
Sbjct: 284 GSSNPVKVVEAMKLLLQDEKVKVVLINIFGGITRCDDVAIGLIQAFDQIKSDIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N  +G  L+         A  + +AA   + 
Sbjct: 344 GTNEHLGRDLLRNHS-RFQIATTMQEAALMAIK 375


>gi|301788870|ref|XP_002929852.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like, partial [Ailuropoda melanoleuca]
          Length = 429

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 155/360 (43%), Positives = 216/360 (60%), Gaps = 3/360 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  +   A  A K L    +V+K+QI AGGRGKG F 
Sbjct: 73  LNLQEYQSKKLMSDHGVRVQRFFVADTAKEALEAAKKLNAKEFVLKAQILAGGRGKGVF- 131

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 132 --SSGLKGGVHLTKDPQVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 189

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 190 AILMDRSYNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIMEGIKDSQAQRMAENLGFL 249

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 250 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 309

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 310 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 369

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 370 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 429


>gi|332261161|ref|XP_003279644.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial isoform 2 [Nomascus leucogenys]
          Length = 444

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 157/367 (42%), Positives = 217/367 (59%), Gaps = 3/367 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDIG 367
           G  ++ G
Sbjct: 395 GTFMEKG 401


>gi|260910325|ref|ZP_05916999.1| succinyl-CoA ligase subunit beta [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635577|gb|EEX53593.1| succinyl-CoA ligase subunit beta [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 378

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 164/384 (42%), Positives = 230/384 (59%), Gaps = 19/384 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y VPV   ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGIFASYGVPVDNSILCKTPQEAVEAFKKLGTERCVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   V+     ILG  +        G  V+ + V +  +I  E Y+
Sbjct: 58  -------GGVKLASNEAEVLQHATNILGMDI-------KGFTVDRILVGEAVNIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP +G+T          L   
Sbjct: 104 SIVIDRKSKGAILMLSREGGMDIEAVAKETPEKIFKIAIDPSVGLTDFKAREAAFKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF  LYK F +KD SL EINPL++ K+G+L+ +D+K++FD+NALYRH DI 
Sbjct: 164 MAQVKQAVPLFQKLYKLFVEKDASLAEINPLVLTKDGQLKAIDAKMTFDNNALYRHPDIF 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + + ++ +E EAK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 AMFEPTADEKKEQEAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ +D  V+ +LINIFGGI RCD + +G++ A KE+K ++P+V+RL 
Sbjct: 284 GSSNPQKIVEAMKLLLADKHVRVVLINIFGGITRCDDVAQGLIEAFKELKTDMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N   G  L+   G   I A  +
Sbjct: 344 GTNEKEGRELLK--GTKFIVAETM 365


>gi|221060124|ref|XP_002260707.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
           knowlesi strain H]
 gi|193810781|emb|CAQ42679.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
           knowlesi strain H]
          Length = 461

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 167/399 (41%), Positives = 249/399 (62%), Gaps = 6/399 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI---KTLPGPL-YVVKSQIHAGGRGK 56
           ++IHEY +  LLRK  +P A+G    +   AE      ++L G +  V+K+QI +GGRG 
Sbjct: 49  LSIHEYLSIDLLRKNMIPCAQGYAAKTPEEAEEKALELQSLCGDVDLVIKAQILSGGRGV 108

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   + +GGV +  +   V     ++L +TL+TKQTG  G + N V++ +   I +
Sbjct: 109 GYFKE--NNFEGGVHICRNSTEVKEIASKMLNNTLVTKQTGEEGKKCNTVFICERFYIRK 166

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR+S  +  + S+ GG  IEE++K  P+ I K+ ID   G ++      C+ 
Sbjct: 167 ERYVAFLLDRSSDGIVLLGSSMGGSSIEEISKKNPEAIHKMNIDVQNGFSTGQAREFCEN 226

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +        D+  NLYK F   D +LLEINP     +GR+   D+K++FDDNA YR 
Sbjct: 227 IGFKNTELDIATDIIANLYKIFKRYDCTLLEINPFSETNDGRVLCCDAKLNFDDNAEYRQ 286

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I   RD+S+E++ EI+AK+ NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 287 KEIFLQRDLSQENAEEIQAKKFNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNF 346

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA +D++  A +II +++  K   INI GGIMRCD++ +GI+ A K+     PL+
Sbjct: 347 LDVGGGATEDEITEALRIINNNAKAKVCFINILGGIMRCDIIARGIIKAFKDTAFTKPLI 406

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG N D    L+ +SG+  I   D++ AAQK V   
Sbjct: 407 VRLEGTNQDEAEELLRQSGIKCIFCQDMNLAAQKSVAMA 445


>gi|302345488|ref|YP_003813841.1| succinate-CoA ligase, beta subunit [Prevotella melaninogenica ATCC
           25845]
 gi|302149461|gb|ADK95723.1| succinate-CoA ligase, beta subunit [Prevotella melaninogenica ATCC
           25845]
          Length = 379

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 170/396 (42%), Positives = 236/396 (59%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIICRTPDEAVEAYKQLGIEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGCNETEIRQHAEAILGMNI-------KGFIVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP+IG++          L   
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVIGMSDYLAREAAFKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F N+YK F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MAQVKQAVPIFKNIYKLFTEKDASLAEINPLVMLKDGSLKAIDAKMTFDDNALFRHPDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + +EE+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTEEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K ++ +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVANGLLEAFKVIETDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++   G +      + DA  K V   K
Sbjct: 344 GTNEAEGRAILE--GTHFTVGTSMADAGHKAVELSK 377


>gi|91203544|emb|CAJ71197.1| strongly similar to succinyl CoA-synthetase subunit b [Candidatus
           Kuenenia stuttgartiensis]
          Length = 390

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 178/397 (44%), Positives = 251/397 (63%), Gaps = 12/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M I+E+QAK +L+ Y++ V +G V+S+   A +A K + G   VVK+QI AGGRGK    
Sbjct: 1   MRIYEFQAKDILKTYSICVPRGRVVSAADDARTAYKEIGGGKCVVKAQILAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR  +S +   S I  +LGS L T QT      +  V +E+   I +E YL
Sbjct: 58  -------GGVRFVNSSEEAESCISGMLGSRLTTYQTNQESFEIKHVLLEEAVSIQKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR+   +  I S +GG+ IE+VAK  P+KIFK  +D   G+    +  + + L + 
Sbjct: 111 AITIDRSLQSLLLIVSAEGGVAIEDVAKKTPEKIFKEPVDLFFGLLPFQLRRITEKLMIS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +L   L+  F +KD  LLEINPL++ +N  L VLD+K+  DDNA++RH +++
Sbjct: 171 AKLSEKVNELIKKLFSVFINKDCLLLEINPLVLTENNELVVLDAKMELDDNAIFRHPELE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    +    E  AK+H LSYI LDG+IGC+VNGAGLAMATMD IKL GG PANFLDVG
Sbjct: 231 YILAEQDIPPDEALAKKHGLSYIHLDGDIGCLVNGAGLAMATMDSIKLCGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  ++V  AFKII SD  VK +LINIFGGIM+CDV+ +GI+  VKE   +IP ++RLE
Sbjct: 291 GDASLEQVTRAFKIILSDRKVKAVLINIFGGIMKCDVIAEGIIRVVKEA--DIPFIVRLE 348

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NVD+  +++ +SGL +I+  ++ DAA+  V A KG
Sbjct: 349 GTNVDLARKILDDSGLKIISVGNMKDAARFAVKASKG 385


>gi|288803535|ref|ZP_06408966.1| succinyl-CoA synthase, beta subunit [Prevotella melaninogenica D18]
 gi|288333958|gb|EFC72402.1| succinyl-CoA synthase, beta subunit [Prevotella melaninogenica D18]
          Length = 379

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 170/396 (42%), Positives = 236/396 (59%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIICRTPDEAVEAYKQLGIEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGCNEAEIRQHAEAILGMDI-------KGFIVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP+IG++          L   
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVIGMSDYLAREAAFKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F N+YK F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MAQVKQAVPIFKNIYKLFTEKDASLAEINPLVMLKDGSLKAIDAKMTFDDNALFRHPDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + +EE+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTEEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K ++ +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVANGLLEAFKVIETDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++   G +      + DA  K V   K
Sbjct: 344 GTNEAEGRAILE--GTHFTVGTSMADAGHKAVELSK 377


>gi|302413247|ref|XP_003004456.1| succinyl-CoA ligase beta-chain [Verticillium albo-atrum VaMs.102]
 gi|261357032|gb|EEY19460.1| succinyl-CoA ligase beta-chain [Verticillium albo-atrum VaMs.102]
          Length = 431

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 169/398 (42%), Positives = 236/398 (59%), Gaps = 20/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LLR+Y + V KG V  +   A++  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 38  LSIHEYLSADLLRQYGIDVPKGSVAKTAAEAKAIAKEIGGEDMVIKAQVLAGGRGKGTFD 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  L+TKQTG  G   N VY+ +     RE YL
Sbjct: 98  N---GLKGGVRVIYSPHEAEMFADQMIGHKLVTKQTGAGGRLCNAVYICERKFARREFYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR S     ++S+QGGMDIE VAKD P+ I    ID   GVT E    +   L   
Sbjct: 155 AILMDRASQTPVIVSSSQGGMDIEAVAKDSPEAINTTYIDINKGVTDEIARDIAVKLGFS 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            Q   D  D    LYK F +KD + +EINPL    + ++  +D+K  FDDNA YR  ++ 
Sbjct: 215 EQCVEDAKDTIQKLYKIFTEKDSTQIEINPLSETSDHKVMCMDAKFGFDDNADYRQKEVF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E RD ++ED+ E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 275 EWRDTTQEDADEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
                            D+ V  I +NIFGGI+RCD +  G+++ V+ + + IP++ RL+
Sbjct: 335 -----------------DAKVSAIFVNIFGGIVRCDHIATGLINTVQALDLKIPIIARLQ 377

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++   ++IA+SG+ +    +L  AA+K V   K V
Sbjct: 378 GTNMEAAQKIIADSGMKIFAIDELQTAAEKAVQLSKVV 415


>gi|118602196|ref|YP_903411.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|189081791|sp|A1AVI3|SUCC_RUTMC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118567135|gb|ABL01940.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 386

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 186/396 (46%), Positives = 253/396 (63%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK L R  ++ + KG++I +        K L G ++VVK+QIHA         
Sbjct: 1   MHIHEYQAKTLFRCRDIQIPKGILIDNTTKINDVCKALGGDVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    S++ V     ++LGS LIT QT   G  V  + +E   +I RELYL
Sbjct: 52  -GGRGKGGGVIFCHSIEKVERVCNQLLGSKLITPQTDAKGLPVGQLLIEAKQNIERELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +  +  ++ST+GGMDIE+VA   P KI K  IDPL  ++ +D   L   L   
Sbjct: 111 SLLIDRQTHKITVLSSTKGGMDIEKVASKTPDKIIKFGIDPLGSLSVQDCTFLAKKLGFN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +   +LY+ F  KD++L+EINPLII +  +L  LD KI FDDNALYRH DI 
Sbjct: 171 TELTKQFNNTLLSLYEIFTQKDVNLIEINPLIITQENKLLALDGKIDFDDNALYRHKDIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD+S+ED +E  A ++ L+YI  DGNIGCMVNGAGLAMATMD+I+ +GG+PANFLDVG
Sbjct: 231 KLRDISQEDEKERLASEYQLNYILFDGNIGCMVNGAGLAMATMDLIEHFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   D+VA AF++I ++++VK IL+NIFGGI+ CD++ +GIL A+K V + +P+V+RLE
Sbjct: 291 GGTTADRVAKAFELIQTETNVKSILVNIFGGIVHCDLIAQGILQAIKTVGLTLPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+ +S  N+    DL  AA KIV   K
Sbjct: 351 GTNAPEGLNLLNKSKFNIHVESDLTKAAIKIVKLTK 386


>gi|299145915|ref|ZP_07038983.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. 3_1_23]
 gi|298516406|gb|EFI40287.1| succinyl-CoA synthase, beta subunit [Bacteroides sp. 3_1_23]
          Length = 376

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 160/394 (40%), Positives = 225/394 (57%), Gaps = 18/394 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A + +     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVLAAYRRMGTDRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN V V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQVLVSEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIEEVA+  P+KI +  I+P IG+           L  Q
Sbjct: 104 SYTIDRNTRSVVLMMSASGGMDIEEVARQTPEKIIRYSINPFIGLPDYLARRFAFSLFPQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+E+NPL + K G L  +D+KI FDDNALYRH ++ 
Sbjct: 164 MEQAGKMAAILQELYKIFVENDASLVEVNPLALTKKGTLMAIDAKIVFDDNALYRHPEVH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK    SY+ +DGNIGCMVNGAGLAMATMD+IKLYGG  ANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKDKGFSYVHMDGNIGCMVNGAGLAMATMDMIKLYGGQSANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G+L A +++  N+P+++RL 
Sbjct: 284 GSSNPVKVIEAMKLLLQDEKVKVVLINIFGGITRCDDVAMGLLQAFEQINSNVPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N  IG  L+         A  + +AA   + A
Sbjct: 344 GTNEHIGRELLRNYS-RFQIATTMKEAALMALKA 376


>gi|288929101|ref|ZP_06422947.1| succinyl-CoA synthase, beta subunit [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330085|gb|EFC68670.1| succinyl-CoA synthase, beta subunit [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 378

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 164/384 (42%), Positives = 230/384 (59%), Gaps = 19/384 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y VPV   ++  +   A  A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGIFASYGVPVDNSILCKTPQEAVEAFKKLGTERCVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+   V+     ILG  +        G  V+ + V +  +I  E Y+
Sbjct: 58  -------GGVKLASNEAEVLQHATSILGMDI-------KGFIVDRILVGEAVNIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP +G+T          L   
Sbjct: 104 SIVIDRKSKGAILMLSREGGMDIEAVAKETPEKIFKIAIDPSVGLTDFKAREAAFKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF  LYK F +KD SL EINPL++ K+G+L+ +D+K++FD+NALYRH DI 
Sbjct: 164 MAQVKQAVPLFQKLYKLFVEKDASLAEINPLVLTKDGQLKAIDAKMTFDNNALYRHPDIF 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + + ++ +E EAK    SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 AMFEPTADEKKEQEAKDKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ +D  V+ +LINIFGGI RCD + +G++ A KE+K ++P+V+RL 
Sbjct: 284 GSSNPQKIVEAMKLLLADKHVRVVLINIFGGITRCDDVAQGLIEAFKELKTDMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N   G  L+   G   I A  +
Sbjct: 344 GTNEKEGRELLK--GTKFIVAETM 365


>gi|332817256|ref|XP_003309926.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Pan troglodytes]
          Length = 440

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 156/366 (42%), Positives = 216/366 (59%), Gaps = 3/366 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFI 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDI 366
           G  ++ 
Sbjct: 395 GTFMEK 400


>gi|156743146|ref|YP_001433275.1| succinyl-CoA synthetase subunit beta [Roseiflexus castenholzii DSM
           13941]
 gi|189081789|sp|A7NNW3|SUCC_ROSCS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|156234474|gb|ABU59257.1| succinyl-CoA synthetase, beta subunit [Roseiflexus castenholzii DSM
           13941]
          Length = 379

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 169/397 (42%), Positives = 244/397 (61%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ +L +Y VPV  G V ++   A +  + + G + VVK+Q+  GGRGK    
Sbjct: 1   MKLHEYQARDILARYGVPVTGGGVATTPAEARAIAEQIGGRV-VVKAQVFVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G  V  V V +     RE+YL
Sbjct: 57  -------GGVKLADTPEQAEQVAGQILGMNI-------KGLTVEKVLVAEAITYEREIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR S  +  +AS +GG++IEEVA+  P+ I K+   P++G+       L   + L 
Sbjct: 103 GAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMLGLLDFQARDLAYGIGLT 162

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +       +   LY+A+ D D SL EINPL++  +G L+ LDSKI  DD+ L+RH D+
Sbjct: 163 DAKQARQFAQIATALYRAYMDVDASLAEINPLVVRADGSLQALDSKIVLDDSGLFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           + +RD S+E   E  A++  ++YI LDG+IGCMVNGAGLAMATMD+IKLYGG PANFLD+
Sbjct: 223 EAMRDASDEPEAEQRAREAGITYIKLDGDIGCMVNGAGLAMATMDVIKLYGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV  A +II SD +VK ++ NIFGGI R D + KGI++A+ EV+ N+P++ RL
Sbjct: 283 GGGASKEKVKTALQIILSDPNVKAVMFNIFGGITRVDEVAKGIVAALSEVQTNVPMIARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G R++AES L  I A  L +AA+K VHA +
Sbjct: 343 VGTNEEEGRRILAESAL--IPAATLAEAAEKAVHAAR 377


>gi|68071999|ref|XP_677913.1| ATP-specific succinyl-CoA synthetase beta subunit, [Plasmodium
           berghei strain ANKA]
 gi|56498203|emb|CAH97433.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium berghei]
          Length = 458

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 163/400 (40%), Positives = 251/400 (62%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI---KTLPGPL-YVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +   AE      + + G +  V+K+QI +GGRG 
Sbjct: 46  LSIHEYMSIDLLRNNNIPCPQGYHAQTPEEAEEKALELQNICGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPDGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE+++K  P+ I+K+ I+   G+T       C+ 
Sbjct: 164 ERYVAFLLDRNSDSICLLGSSVGGSSIEDISKKTPEAIYKININIKDGLTDGQSREFCEQ 223

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +G       ++  NLYK F   D +LLEINPL    + R+   D+K++FDDNA YR 
Sbjct: 224 IGFKGNELDIATNMVVNLYKIFKKYDCTLLEINPLSETNDRRVLCCDAKLNFDDNAEYRQ 283

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E RD+++E+  E+EAK++NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 284 KEIFEKRDLTQENPEELEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNF 343

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A ++++A A KII ++   K   INI GGIMRCD++ +GI++A K++K   PL+
Sbjct: 344 LDVGGSATENEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIKFKKPLI 403

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG N     ++I ES +  I   D++ AA+K V   +
Sbjct: 404 IRLEGTNEKEAIKIIEESKIKCIICQDMNLAAEKAVALAE 443


>gi|255577916|ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
 gi|223530658|gb|EEF32531.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
          Length = 425

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 192/407 (47%), Positives = 257/407 (63%), Gaps = 18/407 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY + V KGV  +S+     AI+ +       VVKSQI AGGRG G+
Sbjct: 27  LNIHEYQGADLMSKYGINVPKGVAAASIDEVRKAIQDVFPDKSELVVKSQILAGGRGLGK 86

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY--------VED 110
           FK      +GGV +       +    ++LG  L+TKQTGP G  V+  Y          D
Sbjct: 87  FKN---GFEGGVHIVK-ADKAVETAGKMLGQILVTKQTGPQGKVVSKTYGVIAMTKSNSD 142

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
               + +  L  LV    G++  IA  +GG  IE++A+ +P  I K+ ID   G+T ED 
Sbjct: 143 NIIFMVDDLLCFLV----GVLLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKGITDEDA 198

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           A + D L  +   R D  +    LYK FC+ D +LLEINP+      +L   D+K++FDD
Sbjct: 199 AKVVDGLAPKVADRNDSIEQVKKLYKLFCECDCTLLEINPMAETAENQLVAADAKLNFDD 258

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA +R  ++ +LRD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+G
Sbjct: 259 NAAFRQKELFKLRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHG 318

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLDVGG A + +V  AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A K+V 
Sbjct: 319 GTPANFLDVGGNASEGQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVA 378

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           + +P+V+RLEG NVD G R++ ESG+ +ITA DLDDAA+K V A  G
Sbjct: 379 LKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAASG 425


>gi|170038855|ref|XP_001847263.1| succinyl-CoA ligase beta-chain, mitochondrial [Culex
           quinquefasciatus]
 gi|167862454|gb|EDS25837.1| succinyl-CoA ligase beta-chain, mitochondrial [Culex
           quinquefasciatus]
          Length = 419

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 179/395 (45%), Positives = 248/395 (62%), Gaps = 4/395 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL +  V +    V+      E  +K      YVVK+QI AGGRGKG F 
Sbjct: 28  LNLLEYQSKKLLEQSGVAIQAFRVLEGRKD-EDVLKDFNVNEYVVKAQILAGGRGKGHFD 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV +      VI  + +++G+ LITKQT   G  V  V V D  +I+RE YL
Sbjct: 87  N---GFKGGVHITKDRSKVIPLVEKMVGAKLITKQTPKDGILVKSVMVADSINIVRETYL 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR       IAS  GGMDIE VA++ P+KI  + I  L G++      +   LE +
Sbjct: 144 SIVMDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPISILAGISRAQAEDVARFLEFK 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G            LY  F   D + +EINPL    +GR+  +D+K++FDDNA +R  DI 
Sbjct: 204 GPLVQTAATEIEKLYSLFQKVDCTQIEINPLAETDDGRVISVDAKLNFDDNAEFRQKDIF 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    + D +EIEA ++NL+YIA++GNIGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 264 AMEVHEDTDPKEIEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +D+V  AF+I+TSD +VK IL+N+FGGI+ C  +  GI++A K + + +PLV+RLE
Sbjct: 324 GNVKEDQVLKAFQILTSDQNVKAILVNVFGGIVNCATIANGIVNATKVIGLRVPLVVRLE 383

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV+   +++ ESGL + +A DLD+AA+K V A+
Sbjct: 384 GTNVNAAKKILQESGLKIESAQDLDEAAKKAVQAI 418


>gi|325269208|ref|ZP_08135827.1| succinyl-CoA ligase subunit beta [Prevotella multiformis DSM 16608]
 gi|324988437|gb|EGC20401.1| succinyl-CoA ligase subunit beta [Prevotella multiformis DSM 16608]
          Length = 379

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 237/396 (59%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV + ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKKFFASYGLPVDRNIICRTPDEAVAAYKQLGVEKAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS   +      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLGSSEAEIRQHAEAILGMNI-------KGFIVDRVLVSEAVDIASEYYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR S     + S  GGMDIE+VAK+ P+KI K++IDP++G+           L   
Sbjct: 104 SILVDRKSKCPMLMLSRAGGMDIEQVAKETPEKIEKIVIDPVVGMNDYLAREAAFKLFDN 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +F N+YK F +KD SL EINPL+++K+G L+ +D+K++FDDNAL+RH D+ 
Sbjct: 164 MAQVKQAVPVFKNIYKLFTEKDASLAEINPLVLLKDGTLKAIDAKMTFDDNALFRHPDVA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL + +EE+ +E EAK    SY+ L G+IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ELFEPTEEERKEREAKDKGFSYVNLGGSIGCMVNGAGLAMATMDMIKLYGGEPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +K+  A K++ SD  VK +LINIFGGI RCD +  G+L A K ++ +IP+V+RL 
Sbjct: 284 GSSNPEKIVEAMKLLLSDKHVKVVLINIFGGITRCDDVANGLLEAFKVIETDIPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  ++   G +      + DA  K V   K
Sbjct: 344 GTNEAEGRAILE--GTHFTVGTSMADAGHKAVELSK 377


>gi|24213802|ref|NP_711283.1| succinyl-CoA synthetase subunit beta [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45658411|ref|YP_002497.1| succinyl-CoA synthetase subunit beta [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|73919462|sp|Q72PA2|SUCC_LEPIC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|73919463|sp|Q8F746|SUCC_LEPIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|24194632|gb|AAN48301.1| succinyl-CoA synthetase beta subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601654|gb|AAS71134.1| succinyl-CoA synthetase beta subunit [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 390

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 187/399 (46%), Positives = 251/399 (62%), Gaps = 14/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAA----ESAIKTLPGPLYVVKSQIHAGGRGK 56
           M IHEYQAK +LR++   V  GVVI     A    +       G + VVK+QIHA     
Sbjct: 1   MKIHEYQAKEILRRHKANVPFGVVIDKKENASKAHDEVTSKTGGSVVVVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV+V  + +  I+ + +ILG  LIT QTGP G +V  VY+E G DI +
Sbjct: 56  -----GGRGKGGGVKVTKTKEDAIAAVDKILGMQLITPQTGPEGKKVLKVYLEQGIDIAK 110

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS+L+DR+      +AST+GGM+IEEVA+ +P+KI K+ IDP IG+       L   
Sbjct: 111 EYYLSILLDRSIRKTIIMASTEGGMEIEEVAETHPEKILKIAIDPGIGLQVNQARQLAFE 170

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L L  ++      L   +Y+A+  +D SLLEINPLI+ K   +   D KI  D+NALYRH
Sbjct: 171 LGLPAESHKSFQSLLAAIYEAYIKEDASLLEINPLILTKQNEIIAGDCKIDLDENALYRH 230

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D    RD++EED  E++A + NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANF
Sbjct: 231 ADNAAFRDITEEDPLEVQASEFNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA++  V   FKII  D +VKGI +NIFGGI+RCD++ +GI+ A K V + +PLV
Sbjct: 291 LDVGGGANKTTVTNGFKIILGDPNVKGIFVNIFGGIVRCDMVAEGIIEAAKAVDLKVPLV 350

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G N ++G  ++ +SGL +    DL +AA  I   +
Sbjct: 351 VRLQGTNSELGREVLNKSGLKITGVDDLREAASTIAKLI 389


>gi|294862256|ref|NP_001171070.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
           isoform 1 precursor [Homo sapiens]
          Length = 440

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 156/366 (42%), Positives = 216/366 (59%), Gaps = 3/366 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 335 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 394

Query: 361 GANVDI 366
           G  ++ 
Sbjct: 395 GTFMEK 400


>gi|146299918|ref|YP_001194509.1| succinyl-CoA synthetase, beta subunit [Flavobacterium johnsoniae
           UW101]
 gi|189029909|sp|A5FHX8|SUCC_FLAJO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|146154336|gb|ABQ05190.1| succinyl-CoA synthetase, beta subunit [Flavobacterium johnsoniae
           UW101]
          Length = 397

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 170/406 (41%), Positives = 243/406 (59%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K +L  Y V V +G+V ++   A +A K L        +V+K+QIHA     
Sbjct: 1   MNIHEYQGKEILASYGVRVQRGIVANNAVEAVAAAKQLTAETGTGWHVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     +I+G  LIT QT P G +VN V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQQVEELAEQIIGMQLITPQTPPEGKKVNKVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP +G+      
Sbjct: 111 ESETSEFYVSVLLNRGTGRNMIMYSTEGGMDIEEVAEHTPHLIFTEEIDPTVGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LY A+   D S+ EINP++   + ++  +D+K++ DDN
Sbjct: 171 RIAFNLGLSGNAFKEMVKFIDALYNAYIGSDASMFEINPVLKTSDNKILAVDAKVNIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYR     E+RD+ EE+  E+EAK+  L+Y+ LDG +GCMVNGAGLAMATMD+IK  G 
Sbjct: 231 ALYRQPKYAEMRDIREENPIEVEAKEVGLNYVDLDGTVGCMVNGAGLAMATMDLIKYAGF 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D +VK ILINIFGGI+RCD + +G++ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVETAFRIILKDPNVKAILINIFGGIVRCDRVAQGVVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N +I   LI  SG+ +++A+   +AA ++  A+
Sbjct: 351 AIKVPIIVRLQGTNAEIAKELIDNSGMPILSAVQFQEAADQVKAAL 396


>gi|154174047|ref|YP_001408277.1| succinyl-CoA synthetase subunit beta [Campylobacter curvus 525.92]
 gi|189046900|sp|A7GYI5|SUCC_CAMC5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|112802755|gb|EAU00099.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
           63) (VEG63) [Campylobacter curvus 525.92]
          Length = 390

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 175/398 (43%), Positives = 245/398 (61%), Gaps = 11/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L++Y V VAKG V  ++  A   +  L G ++ +K+QIHAGGRG     
Sbjct: 1   MNIHEFQAKEILKRYGVNVAKGAVAENLEQASEILNDLEGEIFALKAQIHAGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS +  I    ++LG TLIT QT   G  V  +Y+E+G +  +E+YL
Sbjct: 58  -------GGVKIASSREQAIQFASKLLGMTLITPQTPKNGILVRKIYIEEGLNFKQEIYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL  DR S  ++ I S  GG+ IEE AK  P  I  + IDP IG+       L + L++ 
Sbjct: 111 SLAFDRNSEKISLIVSKDGGVSIEETAKQNPHLIKTISIDPQIGLCGFHTKELINFLQID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L  NLYK +  KD +L+EINPL++ ++     LD+K+SFDD+AL+RH DI+
Sbjct: 171 KILWSKLDTLLQNLYKIYIFKDANLIEINPLVLTQDDEFYALDAKMSFDDSALFRHEDIR 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D ++ D+ E EAK   L+YI L+G++GC+VNGAGLAMATMDIIK  GG  ANFLDVG
Sbjct: 231 ALNDETQTDTSENEAKAQRLNYIKLEGSVGCVVNGAGLAMATMDIIKELGGEAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + VA AF++I +D  VK I +NIFGGI+RCD +  GI+ A +   + +P+V+RL+
Sbjct: 291 GAATGEGVAKAFRLILNDRRVKVIFVNIFGGIVRCDRIAAGIIEACQSTPLGVPVVVRLD 350

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKG 397
           G N      ++  S L  + T+ DL + A+  V   KG
Sbjct: 351 GTNAKEALDMLKNSALKGLHTSDDLFEGARLAVMLAKG 388


>gi|29840541|ref|NP_829647.1| succinyl-CoA synthetase subunit beta [Chlamydophila caviae GPIC]
 gi|33301612|sp|Q822A1|SUCC_CHLCV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|29834890|gb|AAP05525.1| succinyl-CoA synthetase, beta subunit [Chlamydophila caviae GPIC]
          Length = 388

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 241/396 (60%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y++ +    V SSV   + A+K L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLVSYDIAIPPYRVASSVEEGQQALKELAIDAGVVKVQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   +++ + ++L    ++ QT      V  V +    +I  E YL
Sbjct: 58  -------GGVVVAKSPSDILAAVDKLLRMRFVSNQTSGEALPVEKVLITPLVNIAAEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +   A + S  GG+DIEEVA+ YP ++  + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQIRQIIKFMNWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  R  G  L   L + F D D SLLEINPL++ + G L VLD+KI+ DDNALYRH  ++
Sbjct: 171 GDIRKQGAQLIKKLVQCFYDNDASLLEINPLVLTQEGDLLVLDAKITIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIALDGNIGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + +V  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQVQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G  ++  SG+       L++AAQ  V   K
Sbjct: 351 GTNVDLGKDIVQRSGIPCQFTDSLNEAAQLAVALSK 386


>gi|219848976|ref|YP_002463409.1| succinyl-CoA synthetase subunit beta [Chloroflexus aggregans DSM
           9485]
 gi|254778435|sp|B8GCC9|SUCC_CHLAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219543235|gb|ACL24973.1| succinyl-CoA synthetase, beta subunit [Chloroflexus aggregans DSM
           9485]
          Length = 382

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 176/398 (44%), Positives = 240/398 (60%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ LL +Y +PV  G V  +   A +  + + GP+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQARDLLARYGIPVTGGGVAVTPAEAHAIAEQIGGPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +         +ILG  +        G  V  V V +     RELYL
Sbjct: 57  -------GGVKLAQTPAEAEQVAGQILGMNI-------KGLTVEKVLVAEAISYERELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL- 179
           S ++DR S  +  IAS +GG++IEEVAK  P  I K+   P +G+       L   + L 
Sbjct: 103 SAILDRGSKRITMIASAEGGVEIEEVAKTNPSAIVKIAAHPTMGLLDFQARELAFRIGLR 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+AF + D SL EINPL+I  +G L  LDSK+  D++ L+RH D+
Sbjct: 163 DGKQARQFAQIAGALYRAFVESDASLAEINPLVIKNDGNLLALDSKVLLDESGLFRHPDL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             LRD S E   E  A++ ++++I LDGNIGCMVNGAGLAMATMD+IKL GG PANFLD+
Sbjct: 223 AALRDPSAEPEAERRAREADITFIKLDGNIGCMVNGAGLAMATMDVIKLSGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++KV AA +II SD +VK +L NIFGGI R D + +GIL+A++EV  ++P+V RL
Sbjct: 283 GGGAGKEKVKAALQIILSDPNVKAVLFNIFGGITRVDEVARGILAALEEVPTDVPMVARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N ++G  L+A S L  I A  L + AQK V A +G
Sbjct: 343 VGTNEEVGRALLAGSKL--IPAATLAEGAQKAVAAARG 378


>gi|302807299|ref|XP_002985362.1| hypothetical protein SELMODRAFT_122224 [Selaginella moellendorffii]
 gi|300146825|gb|EFJ13492.1| hypothetical protein SELMODRAFT_122224 [Selaginella moellendorffii]
          Length = 432

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 181/381 (47%), Positives = 248/381 (65%), Gaps = 6/381 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KG V+SS     + ++         VVKSQI AGGRG G 
Sbjct: 39  LNIHEYQGADLMSKYGVNVPKGAVVSSRKEISTVLEKEFPDNEELVVKSQILAGGRGLGT 98

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      KGGV +      V     ++LG  L+TKQTGP G  VN V++ +   ++ E+
Sbjct: 99  FKN---GLKGGVHIVK-RDKVEEIAGKMLGQILVTKQTGPEGKPVNKVFICEKLQLVNEM 154

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR S     IA ++GG  IE++A+ YP  I K+ I+   G+T  D   + + L 
Sbjct: 155 YFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPINIHKGITDADAEKVVNGLN 214

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   + D      +LY  FC  D +L+EINPL    +G+L   D+K++FDDNA +R  +
Sbjct: 215 LKCADKNDSMQQVKHLYDLFCKSDCTLVEINPLAETADGKLVAADAKLNFDDNASFRQQE 274

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED+RE+ A   +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG+PANFLD
Sbjct: 275 IFALRDQSQEDAREVAAAAADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGSPANFLD 334

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A +++V  AFKI+TSD  VK IL+NIFGGIM+C+V+  GI++A K V + +PL++R
Sbjct: 335 VGGNASENQVIEAFKILTSDKKVKAILVNIFGGIMKCNVIASGIVNAAKTVSLKVPLIVR 394

Query: 359 LEGANVDIGNRLIAESGLNVI 379
           LEG NVD+G R++ ES +N+I
Sbjct: 395 LEGTNVDLGKRILKESKMNLI 415


>gi|329943126|ref|ZP_08291900.1| succinyl-CoA ligase [ADP-forming] subunit beta [Chlamydophila
           psittaci Cal10]
 gi|332287709|ref|YP_004422610.1| succinyl-CoA synthetase subunit beta [Chlamydophila psittaci 6BC]
 gi|313848283|emb|CBY17284.1| succinyl-CoA synthetase beta chain [Chlamydophila psittaci RD1]
 gi|325507263|gb|ADZ18901.1| succinyl-CoA synthetase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814673|gb|EGF84663.1| succinyl-CoA ligase [ADP-forming] subunit beta [Chlamydophila
           psittaci Cal10]
 gi|328914962|gb|AEB55795.1| succinyl-CoA synthase, beta subunit [Chlamydophila psittaci 6BC]
          Length = 386

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  YN+ +    V SSV      +  L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLASYNIAIPPYRVASSVEEGRHTLNELGISAGVVKVQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   +++ + ++L     + QT      V  V +    +I  E YL
Sbjct: 58  -------GGVIVAKSPDEILAAVDKLLRMRFTSNQTSGEALPVEKVLITPLVNIATEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +   A + S  GG+DIEEVA+ YP ++  + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPAIMLSRAGGVDIEEVAQKYPDQLLTIPLTPFARIYNYQLRQMIKFMGWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L  +L + F D D SLLEINPL++ + G L VLD+K++ DDNALYRH  ++
Sbjct: 171 GDTGKQGVQLIKSLVQCFYDNDASLLEINPLVLTQEGDLLVLDAKVTIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIALDGNIGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQIQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++  SG+       L+  AQ  V   K
Sbjct: 351 GTNVELGKEIVQRSGIPCKFTDSLNTGAQLAVALSK 386


>gi|32491166|ref|NP_871420.1| hypothetical protein WGLp417 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166373|dbj|BAC24563.1| sucC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 396

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 172/393 (43%), Positives = 237/393 (60%), Gaps = 10/393 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  KY +P+ KG  I  +   E  I  L    +V+K QIHAGGRGK    
Sbjct: 1   MNLHEYQAKKLFNKYEIPIPKGYCIKELDEIEKTISNLSTGPWVIKCQIHAGGRGKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S K +    ++ LG+ LIT QT   G +VN + +E    I +ELYL
Sbjct: 58  -------GGIKITNSKKEIHEFAKKWLGNKLITYQTDKNGQKVNYLLIEKKTIIKKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +++R    +  I+S  GG+DIE + K     I+K +++    +       +   L LQ
Sbjct: 111 SFVINRKKSSIMLISSDSGGVDIENIFKKKSNNIYKEILESCYLIQDFQSRKIAFKLGLQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   L   F + D++ LEINP++I     L  LD KI  DDNA+YR+  + 
Sbjct: 171 GNQINQFVKICNKLSLLFLENDLTTLEINPIVIDDKNNLICLDGKIIIDDNAIYRNYSLY 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  D S+ D RE+ A   NL+YI LDGNIGCMVNGAGLAM TMD+IK +GG PANFLDVG
Sbjct: 231 EEHDNSQLDKREVYAANDNLNYIPLDGNIGCMVNGAGLAMGTMDLIKFHGGNPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    +KV  AFKII  DS+VK IL+NIFGGI+RCD++  GI+++V  +KI IP+++RLE
Sbjct: 291 GNTTVEKVEKAFKIILLDSNVKVILVNIFGGIVRCDLISNGIINSVINLKIKIPIIVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N   G + + +S LN+I A  L+DA +K + 
Sbjct: 351 GNNSINGIKALKKSNLNIIAANSLNDAVKKAIK 383


>gi|302795781|ref|XP_002979653.1| hypothetical protein SELMODRAFT_419323 [Selaginella moellendorffii]
 gi|300152413|gb|EFJ19055.1| hypothetical protein SELMODRAFT_419323 [Selaginella moellendorffii]
          Length = 432

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 181/381 (47%), Positives = 248/381 (65%), Gaps = 6/381 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ KY V V KG V+SS     + ++         VVKSQI AGGRG G 
Sbjct: 39  LNIHEYQGADLMSKYGVNVPKGAVVSSRKEISTVLEKEFPDNEELVVKSQILAGGRGLGT 98

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      KGGV +      V     ++LG  L+TKQTGP G  VN V++ +   ++ E+
Sbjct: 99  FKN---GLKGGVHIVK-RDKVEDIAGKMLGQILVTKQTGPEGKPVNKVFICEKLQLVNEM 154

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR S     IA ++GG  IE++A+ YP  I K+ I+   G+T  D   + + L 
Sbjct: 155 YFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPINIHKGITDADAEKVVNGLN 214

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L+   + D      +LY  FC  D +L+EINPL    +G+L   D+K++FDDNA +R  +
Sbjct: 215 LKCADKNDSMQQVKHLYDLFCKSDCTLVEINPLAETADGKLVAADAKLNFDDNASFRQQE 274

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  LRD S+ED+RE+ A   +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG+PANFLD
Sbjct: 275 IFALRDQSQEDAREVAAAAADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGSPANFLD 334

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A +++V  AFKI+TSD  VK IL+NIFGGIM+C+V+  GI++A K V + +PL++R
Sbjct: 335 VGGNASENQVIEAFKILTSDKKVKAILVNIFGGIMKCNVIASGIVNAAKTVSLKVPLIVR 394

Query: 359 LEGANVDIGNRLIAESGLNVI 379
           LEG NVD+G R++ ES +N+I
Sbjct: 395 LEGTNVDLGKRILKESKMNLI 415


>gi|168001359|ref|XP_001753382.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695261|gb|EDQ81605.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 426

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 181/388 (46%), Positives = 248/388 (63%), Gaps = 6/388 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT--LPGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ  AL+ K+ V V KG V+SS       ++   L     VVKSQ+ AGGRG G 
Sbjct: 32  LNIHEYQGAALMSKFGVNVPKGAVVSSTSEIAKVLEEQFLDDTELVVKSQVLAGGRGLGT 91

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK      KGGV +      V     ++LG  L+TKQTG  G  VN V++ +  +++ E+
Sbjct: 92  FKN---GLKGGVHIVK-RDQVEEMAGKMLGQVLVTKQTGAEGKPVNQVFLCEKLNLINEM 147

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++ +DR S     IA  +GG  IE++A+ YP +I K+ I+   G++ E+   +   L 
Sbjct: 148 YFAIALDRASAGPVMIACAKGGTSIEDLAEKYPDQIIKVPININKGISDEEAEKVVKGLA 207

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +      G D     YK F + D + +EINPL     G +   D+K++FDDNA +R  +
Sbjct: 208 PKKVDMQQGIDQIKKFYKLFTETDCTQVEINPLAETSTGVMMAADAKLNFDDNAAFRQKE 267

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I  +RD ++ED RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL GG PANFLD
Sbjct: 268 IFAMRDTTQEDPREVAAGKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLSGGTPANFLD 327

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A + +V  AFKI+TSD+ VK IL+NIFGGIM+CDV+  GI++A K+V + +PLV+R
Sbjct: 328 VGGNATEQQVVEAFKILTSDTRVKAILVNIFGGIMKCDVIAAGIVAAAKQVNLKVPLVVR 387

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDD 386
           LEG NVD+G  ++ ESG+ +ITA DLDD
Sbjct: 388 LEGTNVDVGKTILKESGMTIITADDLDD 415


>gi|302836393|ref|XP_002949757.1| succinate-coa ligase beta chain, succinyl-CoA synthetase
           mitochondrial precursor [Volvox carteri f. nagariensis]
 gi|300265116|gb|EFJ49309.1| succinate-coa ligase beta chain, succinyl-CoA synthetase
           mitochondrial precursor [Volvox carteri f. nagariensis]
          Length = 421

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 168/377 (44%), Positives = 243/377 (64%), Gaps = 7/377 (1%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRF 59
           N+HEYQ   L+ K+ V V  G+   ++     A++ +       V+KSQI AGGRG GRF
Sbjct: 30  NVHEYQGAQLMSKFGVNVPPGIPAKTLDEVAQAVEQMADENGEVVLKSQILAGGRGLGRF 89

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  +GGV +       +   +++LG TL+TKQTGP G  VN + +     + RE+Y
Sbjct: 90  ---TNGLQGGVHIVP-KARALELAKQMLGGTLVTKQTGPAGKPVNTLLIARKMKLRREMY 145

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+DR +     I  ++GG  IE++A+ YP+KI K+ +D   G+T    A + + L +
Sbjct: 146 FAILLDRKTAGPMMIGCSEGGTSIEDLAEKYPEKIIKVPVDSRTGITDAQAAKMVEGLRV 205

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G            LY  F   D +++E+NPL    +G+L   D+K+ FDDNA YRH +I
Sbjct: 206 TGDKAK-AAQQIKALYDLFVKCDCTMVEVNPLAESLDGQLIAADAKLGFDDNAAYRHKEI 264

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            +L+D S+ D RE+ A +++L+YI LDG+IGCMVNGAGLAMATMDIIK++GG+PANFLDV
Sbjct: 265 FDLKDESQIDPREVAAAKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGSPANFLDV 324

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A++ +V  AFKI+TSD  VK IL+NIFGGIM+CDV+ +GI++A K+V +++PLV+RL
Sbjct: 325 GGSANEQQVVEAFKILTSDKQVKAILVNIFGGIMKCDVIARGIVNAAKQVGVSVPLVVRL 384

Query: 360 EGANVDIGNRLIAESGL 376
           EG NV  G  +I  SG+
Sbjct: 385 EGTNVAQGKDIIRSSGM 401


>gi|145476559|ref|XP_001424302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391366|emb|CAK56904.1| unnamed protein product [Paramecium tetraurelia]
          Length = 449

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 184/404 (45%), Positives = 253/404 (62%), Gaps = 14/404 (3%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFK 60
           ++HEYQ+K L+R +NV V KG +  +   A    KTL P    ++KSQ+HAGGRGKG   
Sbjct: 44  DLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGKGTL- 102

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LYL
Sbjct: 103 --SSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLYL 160

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+LQ
Sbjct: 161 AFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDINTGLTDQIANKVVDTLQLQ 220

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    +   NLYK F   D + +EINP       +L  +D+KI+ DDNA +R   + 
Sbjct: 221 -SVRQQAVEQLRNLYKMFISLDATQVEINPWATDPKNQLFCIDAKINVDDNAKFRQKQLV 279

Query: 241 ELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +LR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PANF
Sbjct: 280 DLRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGEPANF 339

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PLV
Sbjct: 340 LDVGGGANVEQVKTAFEILNSHPRVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLV 399

Query: 357 MRLEGANVDIGNRLIAE-----SGLNVITAIDLDDAAQKIVHAV 395
           +RL G N   G +++ E     + +++ TA DLDDAAQK V   
Sbjct: 400 VRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIA 443


>gi|291237501|ref|XP_002738684.1| PREDICTED: GTP-specific succinyl-CoA synthetase, beta subunit,
           putative-like [Saccoglossus kowalevskii]
          Length = 389

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 171/387 (44%), Positives = 234/387 (60%), Gaps = 6/387 (1%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  Y V V +  V  +   A    + L        VVK+QI AGGRGKG+F    +  +G
Sbjct: 1   MESYGVNVQRFKVAENAKDAGVQAQELLNTIASELVVKAQILAGGRGKGKF---SSGLQG 57

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV + +    V S I+++LG TL TKQTG  G  V  V + +  DI RE Y ++L+DRT 
Sbjct: 58  GVHLTTKADEVSSLIKKMLGHTLTTKQTGKDGVIVKKVMIAEALDIERETYFAILMDRTF 117

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                + S  GG+DIEEVAK+ P  IFK  ID  +G+T +    +   L+   + R +  
Sbjct: 118 DGPVMVGSPAGGVDIEEVAKNSPDLIFKKPIDITVGITEDMALDMAANLDFDAEKRTEAA 177

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
               NLYK F   D + +EINP     +GR+   D+K++FDDN+ +R   +  + D SE 
Sbjct: 178 RQIQNLYKLFIGVDATQVEINPFGETPDGRVVCFDAKMNFDDNSEFRQKQVFSMDDESET 237

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           D RE  A    L+Y+ +DGNIGC+VNGAGLAMATMDII LYGG PANFLDVGGG  + +V
Sbjct: 238 DPRETRAAACGLNYVGMDGNIGCLVNGAGLAMATMDIIDLYGGHPANFLDVGGGVQEHQV 297

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
             A  IITSD  VK ILINIFGGI+ C  +  G+++A++ +K+ +PLV+RL G NVD   
Sbjct: 298 VEAIDIITSDPQVKAILINIFGGIVNCATVANGLITALQGIKLEVPLVVRLAGTNVDAAR 357

Query: 369 RLIAESGLNVITAIDLDDAAQKIVHAV 395
           +++  S L +++A DLDDAAQK V  +
Sbjct: 358 QILDNSNLPIVSASDLDDAAQKAVEML 384


>gi|268578207|ref|XP_002644086.1| Hypothetical protein CBG17559 [Caenorhabditis briggsae]
 gi|187025712|emb|CAP35184.1| hypothetical protein CBG_17559 [Caenorhabditis briggsae AF16]
          Length = 435

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 163/394 (41%), Positives = 230/394 (58%), Gaps = 4/394 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+    +L+ Y + V    V      A +  K + G  YVVK+Q+ AGGRGKGRF   
Sbjct: 26  LHEHHGMKILQDYEIKVPPFGVAQDATTALNEAKRIGGKDYVVKAQVLAGGRGKGRF--- 82

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +  +GGV++  + + V      ++G+ LITKQT   G +   V V       RE Y S+
Sbjct: 83  SSGLQGGVQIVFTPEEVKQKAEMMIGAHLITKQTDHRGKKCEEVMVCKRLFTRREYYFSI 142

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +DR +     IAS+QGG++IEEVA   P  I K+ ID  +G+T E    +   +     
Sbjct: 143 TLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKD 202

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
                 ++   LYK F   D +L+EINP+    NG +  +D K+  D NA +R   + +L
Sbjct: 203 CEQQASEIIEKLYKMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFRQAKLFDL 262

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D  +ED  E+        Y  +D N+GCMVNGAGLAMATMDIIKL+GG PANFLDVGGG
Sbjct: 263 KDKKQEDELEVIYDLLTGKYTTIDFNVGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGG 322

Query: 303 ADQDKVAAAFKIITSD-SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           A  ++V  AFKIIT+D   V  IL+NIFGGIMRCDV+ +GI+ A +E+ + IP+V+RL+G
Sbjct: 323 ATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIPIVVRLQG 382

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             V+    LIA S L ++   +LD+AA+ +V   
Sbjct: 383 TKVEDAKALIATSQLRILPCDNLDEAAKMVVKLS 416


>gi|281350903|gb|EFB26487.1| hypothetical protein PANDA_020149 [Ailuropoda melanoleuca]
          Length = 367

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 156/361 (43%), Positives = 217/361 (60%), Gaps = 3/361 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+  + V V +  V  +   A  A K L    +V+K+QI AGGRGKG F 
Sbjct: 10  LNLQEYQSKKLMSDHGVRVQRFFVADTAKEALEAAKKLNAKEFVLKAQILAGGRGKGVF- 68

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +    + V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 69  --SSGLKGGVHLTKDPQVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 126

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID + G+       + + L   
Sbjct: 127 AILMDRSYNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIMEGIKDSQAQRMAENLGFL 186

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 187 GPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 246

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 247 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 306

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AFK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLE
Sbjct: 307 GGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLE 366

Query: 361 G 361
           G
Sbjct: 367 G 367


>gi|46198478|ref|YP_004145.1| succinyl-CoA synthetase beta chain [Thermus thermophilus HB27]
 gi|46196100|gb|AAS80518.1| succinyl-CoA synthetase beta chain [Thermus thermophilus HB27]
          Length = 391

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 152/397 (38%), Positives = 217/397 (54%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQAK +L +Y VPV  G V  +   A+   +       V+K+Q+H GGRGK    
Sbjct: 14  LNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEFG-KRVVIKAQVHVGGRGKA--- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  L        G  V  V V +  DI +E Y 
Sbjct: 70  -------GGVKLADTPQEAYEKAQAILGMNL-------KGLTVKKVLVAEAVDIAKEYYA 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G    +   +     L+
Sbjct: 116 GLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKRAGLE 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH D+ 
Sbjct: 176 GNL-NKLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLA 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 235 ELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 295 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 354

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  +       +AA+ IV  V G
Sbjct: 355 GTAEEEAKKLLE--GKPIYMYPTSIEAAKVIVAMVGG 389


>gi|161075765|gb|ABX56630.1| succinyl-CoA synthetase subunit beta [Methylacidiphilum infernorum
           V4]
          Length = 394

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 157/396 (39%), Positives = 239/396 (60%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EY AK +L K  V + +  V  +   A      L     VVK+QI AGGR KG+F 
Sbjct: 1   MNLLEYVAKEILAKEGVAIPRYGVAETPQEAFDIAIKLNTTPLVVKAQISAGGRAKGKFV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++ +S + V     +++G  L+T QTG TG  V  V V +  D+ +ELYL
Sbjct: 61  N---GFEGGVKICNSPEEVKQVAEKMIGGLLVTAQTGTTGQPVRKVIVSESIDVAKELYL 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL        +  + S  GG++IE +A + PQ + K    P   +    +      L  +
Sbjct: 118 SLTYSYAEAAILAMGSLAGGVNIERIALENPQALVKKYFYPEEPLWDFQLREFAAQLGFK 177

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+  +D   +  +L+ AF + D +L EINPL + K  R   LD+KI+ DDN+L+R  ++ 
Sbjct: 178 GKPLVDFSKILKSLFYAFINHDATLCEINPLALDKENRFWALDAKITIDDNSLFRRNELL 237

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             R  +  D +E+EA ++ ++Y+ L+G IGCMVNGAGLAMATMDI++ +GG PANFLDVG
Sbjct: 238 GYRFETVYDPQELEALRYGVNYVGLEGQIGCMVNGAGLAMATMDILERFGGKPANFLDVG 297

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQ ++  AF+++ S+ ++K ILINIFGGIMRCD++ + I+ A K     +P+++RLE
Sbjct: 298 GGADQSQLQNAFRVLLSNPNLKVILINIFGGIMRCDLIAEAIVEAAKNHPPKVPIIIRLE 357

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  V+ G +++  S L  + A DL++AA++ V+ +K
Sbjct: 358 GTRVEEGKKILKGSALQYVFAGDLEEAAKQAVYFLK 393


>gi|189219057|ref|YP_001939698.1| Succinyl-CoA synthetase, beta subunit [Methylacidiphilum infernorum
           V4]
 gi|189185915|gb|ACD83100.1| Succinyl-CoA synthetase, beta subunit [Methylacidiphilum infernorum
           V4]
          Length = 395

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 157/396 (39%), Positives = 239/396 (60%), Gaps = 3/396 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EY AK +L K  V + +  V  +   A      L     VVK+QI AGGR KG+F 
Sbjct: 2   MNLLEYVAKEILAKEGVAIPRYGVAETPQEAFDIAIKLNTTPLVVKAQISAGGRAKGKFV 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++ +S + V     +++G  L+T QTG TG  V  V V +  D+ +ELYL
Sbjct: 62  N---GFEGGVKICNSPEEVKQVAEKMIGGLLVTAQTGTTGQPVRKVIVSESIDVAKELYL 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL        +  + S  GG++IE +A + PQ + K    P   +    +      L  +
Sbjct: 119 SLTYSYAEAAILAMGSLAGGVNIERIALENPQALVKKYFYPEEPLWDFQLREFAAQLGFK 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+  +D   +  +L+ AF + D +L EINPL + K  R   LD+KI+ DDN+L+R  ++ 
Sbjct: 179 GKPLVDFSKILKSLFYAFINHDATLCEINPLALDKENRFWALDAKITIDDNSLFRRNELL 238

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             R  +  D +E+EA ++ ++Y+ L+G IGCMVNGAGLAMATMDI++ +GG PANFLDVG
Sbjct: 239 GYRFETVYDPQELEALRYGVNYVGLEGQIGCMVNGAGLAMATMDILERFGGKPANFLDVG 298

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQ ++  AF+++ S+ ++K ILINIFGGIMRCD++ + I+ A K     +P+++RLE
Sbjct: 299 GGADQSQLQNAFRVLLSNPNLKVILINIFGGIMRCDLIAEAIVEAAKNHPPKVPIIIRLE 358

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  V+ G +++  S L  + A DL++AA++ V+ +K
Sbjct: 359 GTRVEEGKKILKGSALQYVFAGDLEEAAKQAVYFLK 394


>gi|218296426|ref|ZP_03497169.1| succinyl-CoA synthetase, beta subunit [Thermus aquaticus Y51MC23]
 gi|218243220|gb|EED09751.1| succinyl-CoA synthetase, beta subunit [Thermus aquaticus Y51MC23]
          Length = 378

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 151/397 (38%), Positives = 217/397 (54%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L +Y VPV  G V  +   A+   +       V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILARYGVPVPPGRVAYTPEEAKRIAEEFG-KRVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +        + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLADTPAEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+   V  + S +GG+DIEEVA   P+ I K  IDP  G+   +   +     L+
Sbjct: 103 GLILDRSKKRVVLMLSKEGGVDIEEVAAQRPEAIHKFWIDPHKGLRPFEAREMVRRAGLE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH ++ 
Sbjct: 163 GNL-NKLAQVLVALYRAYEGVDASIAEINPLVVTTDGAIVAADAKIVLDDNALFRHPELA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 222 ELREVEAEHPLEVEASNYGFAYVKLDGNIGVIGNGAGLVMYTLDLVNRVGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 282 GGAKADVVYNALKLVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  +       +AA+ IV  V G
Sbjct: 342 GTAEEEAKKLLE--GKPIYMYPTSIEAAKAIVAMVGG 376


>gi|86142672|ref|ZP_01061111.1| Succinyl-CoA synthetase, beta subunit [Leeuwenhoekiella blandensis
           MED217]
 gi|85830704|gb|EAQ49162.1| Succinyl-CoA synthetase, beta subunit [Leeuwenhoekiella blandensis
           MED217]
          Length = 396

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 172/401 (42%), Positives = 241/401 (60%), Gaps = 20/401 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI----KTLPGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G V ++   A  A     +      +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILSSFGVRIQRGKVATTAAEAVEAAKKLTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ V     EI+G  L+T QT   G +V+ V V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQEVEQIAGEIIGMNLVTPQTSAEGKKVHQVLVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L++R +G    + ST+GGMDIEEVA+  P  IF   IDP  G+      
Sbjct: 111 DSEPEEYYMSVLLNRATGKNMIMYSTEGGMDIEEVAEKTPHLIFTEEIDPATGLLGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  +       LYKA+ + D SL EINP++   + ++  +D+K+S DDN
Sbjct: 171 RIAFNLGLSGTAFKEMTKFVAALYKAYSESDSSLFEINPVLKTSDDKIMAVDAKVSLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           ALYRH D   +RD  EE+  E+EAK+  L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALYRHKDYAAMRDKREENPVEVEAKEVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD ++V  AF +I  D +VK IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAERVETAFNLILKDPNVKAILVNIFGGIVRCDRVAQGIVDAYKNMGT 350

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IN+P+++RL+G N DI   LI  SGL+V +AI   +AA K+
Sbjct: 351 INVPIIVRLQGTNADIAKELIDNSGLDVQSAIQFKEAADKV 391


>gi|135027|sp|P25126|SUCC_THETH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94732|pir||S15950 succinate-CoA ligase (ADP-forming) (EC 6.2.1.5) beta chain
           [validated] - Thermus aquaticus
 gi|48177|emb|CAA38006.1| succinate--CoA ligase (ADP-forming) [Thermus thermophilus]
 gi|227822|prf||1712304C succinyl CoA synthetase beta
          Length = 378

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 153/397 (38%), Positives = 217/397 (54%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L +Y VPV  G V  +   A+   +       V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEFG-KRVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G    +   +     L+
Sbjct: 103 GLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKRAGLE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH D+ 
Sbjct: 163 GNL-NKLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 222 ELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 282 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  V       +AA+ IV  V G
Sbjct: 342 GTAEEEAKKLLE--GKPVYMYPTSIEAAKAIVAMVGG 376


>gi|156101930|ref|XP_001616658.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium vivax
           SaI-1]
 gi|148805532|gb|EDL46931.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium vivax]
          Length = 462

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 168/401 (41%), Positives = 248/401 (61%), Gaps = 7/401 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI---KTLPGPL-YVVKSQIHAGGRGK 56
           +++HEY +  LLR   +P A+G    +   AE      + L G +  V+K+QI +GGRG 
Sbjct: 49  LSLHEYISIDLLRNNMIPCAQGYAAKTPEEAEEKALELQNLCGDVDLVIKAQILSGGRGV 108

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   + +GGV +  +   V     ++L +TL+TKQTG  G + N V++ +   I +
Sbjct: 109 GYFKE--NNFEGGVHICRNSTEVKEIASKMLRNTLVTKQTGEEGKKCNTVFICERFYIRK 166

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++LL+DR+S  +  + S+ GG  IEE++K  P+ I K+ ID   G +S      C+ 
Sbjct: 167 ERYVALLLDRSSDGIVLLGSSTGGSSIEEISKKNPEAIHKMRIDVQNGFSSGQSREFCEK 226

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +        D+  NLYK F   D +LLEINP     +GR+   D+K++FDDNA YR 
Sbjct: 227 IGFKNTQLDIATDVIANLYKIFTQYDCTLLEINPFSETNDGRVLCCDAKLNFDDNAEYRQ 286

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I + RD+S+E++ EI+AK+ NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NF
Sbjct: 287 KEIFQKRDLSQENAEEIQAKKFNLNYVSLDGNIACMVNGAGLAMATLDLIVLHSGSPSNF 346

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK-EVKINIPL 355
           LDVGGGA +D++  A KII  +   K   INI GGIMRCD++ +GI+ A K E     PL
Sbjct: 347 LDVGGGATEDEITEALKIINKNPKAKVCFINILGGIMRCDIIARGIIRAFKEEAAFGKPL 406

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           ++RLEG N D    L+ +SG+  +   D++ AAQK V   +
Sbjct: 407 IVRLEGTNQDEAEELLRQSGVKCVFCQDMNLAAQKSVAMAR 447


>gi|121999019|ref|YP_001003806.1| succinyl-CoA synthetase subunit beta [Halorhodospira halophila SL1]
 gi|189030207|sp|A1WZ92|SUCC_HALHL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|121590424|gb|ABM63004.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Halorhodospira
           halophila SL1]
          Length = 391

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 195/400 (48%), Positives = 265/400 (66%), Gaps = 12/400 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK L  +  + + +G V  S   A +A + L G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEFQAKHLFTEAGIAIPRGYVARSSAEARAAAERLGGSAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV      +      +LG  L+T QT   G  ++ + VE+G +I RELYL
Sbjct: 58  -------GGVRVIQEGDEIERYADSLLGERLVTHQTDGRGQPIHALLVEEGLEIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             LVDR S  V F+ S  GGMDIEEVA   P++I  + + P  G+       L   L L 
Sbjct: 111 GALVDRASQRVVFMVSAAGGMDIEEVAASEPERIHTVRVHPAAGLQPYQCRQLGFALGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY--RHLD 238
                D   +   LY+ F ++D+SL+EINPLI+   GRL  LD+K++ DDNA+   R   
Sbjct: 171 KAQVGDLTRMMQGLYRLFLERDLSLVEINPLIVTGEGRLLALDAKVTVDDNAVEIGRQSQ 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           IQ++RD+++ED  E+ A +HNL+YI LDGNIGCMVNGAGLAMATMD+IKL+GGAPANFLD
Sbjct: 231 IQDMRDLTQEDETEVRAAEHNLNYITLDGNIGCMVNGAGLAMATMDVIKLHGGAPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGG + ++VA AFKII S  SV+GIL+NIFGGI+RCD++ +GI++AV++V + +P+V+R
Sbjct: 291 VGGGTNAERVAEAFKIILSSPSVEGILVNIFGGIVRCDMIAEGIVAAVQDVGVEVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           LEG NV+ G +++A+SGL++I A DL DAA KIV     V
Sbjct: 351 LEGTNVEQGKQILADSGLDLIPADDLADAAAKIVDIAGQV 390


>gi|307200145|gb|EFN80454.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Harpegnathos saltator]
          Length = 449

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 154/393 (39%), Positives = 228/393 (58%), Gaps = 3/393 (0%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE+ A  LL+   +P     V  +     +  K       V+K+Q+ A   G       
Sbjct: 27  VHEHVAYTLLKTAGIPTPSFEVAKTPDETAALAKDFKTKDIVLKAQVLA---GGRGMGRF 83

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV +  + +        ++G  L+TKQTG  G   N V +       +E YL++
Sbjct: 84  RGTDISGVMMCETPEQAKKLANNMIGKVLVTKQTGAAGKICNSVMITTRMFPRKEYYLAM 143

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +++RT      I S QGG++IEE+A   P+ I  + ID   G+T+E   S+ + L L GQ
Sbjct: 144 MLERTFDGPVLIVSKQGGVNIEEIAATNPEAISYIPIDMRKGLTAEQADSVGNKLGLTGQ 203

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
           ++     +  NLY+ F +KD  LLEINP +    G+   LD K +FDD+A +R  ++   
Sbjct: 204 SKEIASIIACNLYELFIEKDALLLEINPFVEDICGQYYALDCKCNFDDSADFRQKELFAF 263

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D ++ D  E+EA++HNL+YI LDGNIGC+VNGAGLAMATMDIIK YGG PANFLDVGG 
Sbjct: 264 KDTTQMDPNEVEAEKHNLNYITLDGNIGCLVNGAGLAMATMDIIKFYGGMPANFLDVGGT 323

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A  + V   FKI+++  +V+ IL+NIFGGIMRCD++ +GI++A K++ +  P+V+RL+G 
Sbjct: 324 ATIETVTEGFKILSAGENVEAILVNIFGGIMRCDIIAQGIINAFKQLDLKTPVVVRLQGT 383

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           NV     LIA++ L V +  D  +AA+  V   
Sbjct: 384 NVKEAKALIADAKLKVFSIDDFAEAAETSVKLA 416


>gi|55980507|ref|YP_143804.1| succinyl-CoA synthetase subunit beta [Thermus thermophilus HB8]
 gi|55771920|dbj|BAD70361.1| succinyl-CoA synthetase beta chain [Thermus thermophilus HB8]
          Length = 391

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 152/397 (38%), Positives = 217/397 (54%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQAK +L +Y VPV  G V  +   A+   +       V+K+Q+H GGRGK    
Sbjct: 14  LNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEFG-KRVVIKAQVHVGGRGKA--- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 70  -------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 115

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G    +   +     L+
Sbjct: 116 GLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKRAGLE 175

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G +   D+KI  DDNAL+RH D+ 
Sbjct: 176 GNL-NKLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFRHPDLA 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   E+EA  +  +Y+ LDGNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 235 ELREVEAEHPLEVEASNYGFAYVKLDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 295 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 354

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  V       +AA+ IV  V G
Sbjct: 355 GTAEEEAKKLLE--GKPVYMYPTSIEAAKVIVAMVGG 389


>gi|195572423|ref|XP_002104195.1| GD18581 [Drosophila simulans]
 gi|194200122|gb|EDX13698.1| GD18581 [Drosophila simulans]
          Length = 507

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 174/377 (46%), Positives = 224/377 (59%), Gaps = 3/377 (0%)

Query: 22  GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
             V  +   A      L     V+K+Q+ AGGRGKG FK      KGGVRV    ++   
Sbjct: 64  FAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKN---GLKGGVRVVYDPQTAEE 120

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGM 141
              +++   L+TKQTG  G     V V +     RE Y +++++R       IAS +GG+
Sbjct: 121 LSGKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGV 180

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           DIEEVA   P  I    ID   G+TSE    +   + L G        +  NLY  F  K
Sbjct: 181 DIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGDGEDTHVQMLLNLYDLFVKK 240

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D  L+EINP           LD+K+ FDDNA +R  ++  LRD ++ED +E+EA ++NL+
Sbjct: 241 DALLVEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLN 300

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           YIALDG IGCMVNGAGLAMATMDIIKLYGG PANFLDVGGGA  + V AAFKIITSD  V
Sbjct: 301 YIALDGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKV 360

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
             IL+NIFGGIMRCDV+ +GI+SA K++ +N+P+V+RL+G  V     LI  SGL ++  
Sbjct: 361 LCILVNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILAR 420

Query: 382 IDLDDAAQKIVHAVKGV 398
            DLD AA   VH  + V
Sbjct: 421 DDLDKAADLAVHLAQIV 437


>gi|153806391|ref|ZP_01959059.1| hypothetical protein BACCAC_00654 [Bacteroides caccae ATCC 43185]
 gi|149131068|gb|EDM22274.1| hypothetical protein BACCAC_00654 [Bacteroides caccae ATCC 43185]
          Length = 376

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 155/393 (39%), Positives = 226/393 (57%), Gaps = 18/393 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +  KY +PV +  +  +     +A +++     V+K+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKEIFSKYGIPVERHTLCRTAAGVVAAYRSVGADRVVIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ +    + + ILG ++        G  VN + V +  DI  E Y+
Sbjct: 58  -------GGVKLVNNTEDAYQEAKNILGMSI-------KGLPVNQILVSEAVDITAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  + S  GGMDIE+VA+  P+KI +  I+P IG+           L  +
Sbjct: 104 SFTIDRNTRSVILMMSASGGMDIEQVARQTPEKIIRYSINPFIGIPDYLARHFAFSLFPK 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LYK F + D SL+EINPL +   G L  +D+KI FDDNAL RH +I 
Sbjct: 164 TEQASKMAVILQALYKIFMENDASLVEINPLALTTKGMLIAIDAKIVFDDNALCRHPEIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D +EE+  E +AK+   SY+ +DGNIGCMVNGAGLAMATMD+IK+YGG PANFLD+G
Sbjct: 224 ALFDPTEEEKVEADAKERGFSYVRMDGNIGCMVNGAGLAMATMDMIKIYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A K++  D  VK +LINIFGGI RCD +  G++ + +++K  IP+++RL 
Sbjct: 284 GSSNPIKVVEAMKLLLQDEKVKVVLINIFGGITRCDDVAIGLIQSFEQIKSEIPIIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N +IG  L+         A  + +AA   + 
Sbjct: 344 GTNENIGRDLLRNHS-RFQIATTMQEAALMAIK 375


>gi|320449885|ref|YP_004201981.1| succinyl-CoA synthetase subunit beta [Thermus scotoductus SA-01]
 gi|320150054|gb|ADW21432.1| succinyl-CoA synthetase, beta chain [Thermus scotoductus SA-01]
          Length = 378

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 150/397 (37%), Positives = 219/397 (55%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L +Y VPV  G V  +   A+   + L     V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILARYGVPVPPGKVAYTPDEAKRIAEELG-KRVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +      + ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR    V  + S +GG+DIEEVA + P+ I K  IDP  G  + +   +     L+
Sbjct: 103 GLILDRAQKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRAFEAREMVKQAGLE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+A+   D S+ EINPL++  +G++   D+KI  DDNAL+RH ++ 
Sbjct: 163 GNL-NKLAQVLVALYQAYEGVDASIAEINPLVVTTDGQIVAADAKIVLDDNALFRHPELM 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR++  E   E+EA  +  +Y+ L GNIG + NGAGL M T+D++   GG PANFLD+G
Sbjct: 222 ELREIEAEHPLEVEASNYGFAYVKLQGNIGIIGNGAGLVMYTLDLVNRVGGRPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A K++  D  VKG+ INIFGGI R D + KG++ A++E  +  P+VMR+ 
Sbjct: 282 GGAKAEVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   RL+   G  +       +AA+ IV  V G
Sbjct: 342 GTAEEEAKRLLE--GRPIYMYPTSIEAAKAIVAMVGG 376


>gi|124809017|ref|XP_001348469.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium falciparum 3D7]
 gi|23497363|gb|AAN36908.1|AE014820_58 ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium falciparum 3D7]
          Length = 462

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 167/400 (41%), Positives = 248/400 (62%), Gaps = 6/400 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           ++IHEY +  LLR +NVP  +G    +   AE     L         V+K+Q+ +GGRG 
Sbjct: 50  LSIHEYLSVDLLRSHNVPCPEGYAAKTAEEAEEKALLLQNVCGDNDLVIKAQVLSGGRGV 109

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE   + +GGV V  +   V     ++L +TLITKQ+GP G + N V++ +   I +
Sbjct: 110 GYFKE--NNFEGGVHVCRNSMEVKEIATKMLNNTLITKQSGPEGKKCNTVFICERFYIRK 167

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE++ K  P  I+KL ID   G+T+       + 
Sbjct: 168 ERYIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDINNGLTTGQAREFSEN 227

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +        D+  NLYK F   D +LLEINPL  + +GR+   D+K++FDDNA YR 
Sbjct: 228 IGFKNDQLNIVTDMIVNLYKVFKKYDCTLLEINPLSELNDGRVLCCDAKLNFDDNAEYRQ 287

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E RD+++E+  E+ AK++NL+Y++L+GNI CMVNGAGLAMAT+D+I L+ G P+NF
Sbjct: 288 KNIFEKRDLTQENKEELLAKKYNLNYVSLNGNIACMVNGAGLAMATLDLIILHKGNPSNF 347

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA ++++  A KII ++ + K   INI GGIMRCD++  GI++A K+VK N P++
Sbjct: 348 LDVGGGATEEEITEALKIINNNENAKICFINILGGIMRCDIIANGIINAFKQVKFNKPII 407

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +RLEG N +  + +I  S +  I   D++ AAQK V   K
Sbjct: 408 IRLEGTNQEQAHEIIKNSNIKCIVCQDMNIAAQKSVAMAK 447


>gi|46446932|ref|YP_008297.1| succinate-CoA ligase (ADP-forming) beta chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|81626858|sp|Q6MBM7|SUCC_PARUW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|46400573|emb|CAF24022.1| probable succinate-CoA ligase (ADP-forming) beta chain [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 389

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 169/386 (43%), Positives = 245/386 (63%), Gaps = 10/386 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HE+QAK +LRKY +PV    + SS    E  IK       ++K Q+HAGGRGK    
Sbjct: 1   MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQYQLQSAIIKVQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + ++   +E++G  +I +QTGP+G   + V +     I +E YL
Sbjct: 58  -------GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAILIKKEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + ++R       IAS  GG++IE++A + P ++  L I       S  +  +   +  +
Sbjct: 111 GITINRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPIPLEETFRSYHLIRIASFMGWK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   +G  +  +L KAF + D SLLEINPL+  K G L  LD+K+S DDNAL++H D++
Sbjct: 171 GKQIQEGVAIIQSLVKAFKETDASLLEINPLVETKEGHLLALDAKLSIDDNALFKHEDLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+  + E  A+Q  L+Y+AL+G IGCMVNGAGLAMATMD+I+ +GG PANFLDVG
Sbjct: 231 TLFDPSQMSNNEARAQQFELAYVALEGEIGCMVNGAGLAMATMDLIQYHGGRPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q KVA  F+II SDS+VK ILINIFGGIM C+ L  GI+ A K ++I+IPL++R+E
Sbjct: 291 GGASQVKVAEGFRIILSDSNVKAILINIFGGIMNCETLASGIIEAAKGLQIHIPLIVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV+ G +L+ +SGL ++   +L +
Sbjct: 351 GTNVEKGKQLLQQSGLKILITENLTE 376


>gi|149200487|ref|ZP_01877500.1| succinyl-CoA synthetase beta chain [Lentisphaera araneosa HTCC2155]
 gi|149136410|gb|EDM24850.1| succinyl-CoA synthetase beta chain [Lentisphaera araneosa HTCC2155]
          Length = 386

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 176/387 (45%), Positives = 244/387 (63%), Gaps = 13/387 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQA+ L R+Y +PV +G V  S+   E     L     VVK+Q+HA         
Sbjct: 1   MLIHEYQARDLFREYGIPVTEGKVFESLEGVEEYATELG--QCVVKAQVHA--------- 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +++  I     ILG  LIT QT   G +VN + +  G DI +E YL
Sbjct: 50  -GGRGKGGGVKFAPTVEKAIEHATNILGMQLITHQTTAEGCKVNKILLCPGLDIAKEYYL 108

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L +DR +     IAST+GGMDIEEVA+  P+KI K+ +DP  G  +     + D L  +
Sbjct: 109 ALTIDRATQCPFIIASTEGGMDIEEVAESTPEKITKIKVDPSAGCWAYHGRKVADALGFE 168

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +  NLYK F +KD S++EINPL++ ++  +  +D K++FD NALYR  DI 
Sbjct: 169 GKQARIVAAVAQNLYKMFMEKDCSIVEINPLVVTEDNEIYAIDGKVNFDSNALYRQKDIV 228

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD  EE+  E+EA +H+L+YI LDGN+ CMVNGAGLAMATMD+I++ GG+PANFLDVG
Sbjct: 229 ELRDPLEEEPLEVEASEHDLAYIKLDGNVACMVNGAGLAMATMDMIQISGGSPANFLDVG 288

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           G A   +V  AF+I+  D +V+GILIN+FGGI+RCD++ +G++ AVK +  I  P+V+RL
Sbjct: 289 GTATPARVEQAFRILLKDPNVEGILINVFGGIVRCDLVAEGVIEAVKNIGNIEQPIVIRL 348

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
            G N   G +L+AES L   TA  L++
Sbjct: 349 SGTNSTEGKKLLAESDLTFETADSLNE 375


>gi|288924929|ref|ZP_06418865.1| succinyl-CoA synthase, beta subunit [Prevotella buccae D17]
 gi|288338119|gb|EFC76469.1| succinyl-CoA synthase, beta subunit [Prevotella buccae D17]
          Length = 377

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 232/396 (58%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV   ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGFFASYGLPVDNSILCFTPDEAVAAYKKLGVERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V      ILG  +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLAGSEAEVKECAEAILGMNI-------KGFTVDRVLVGEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP IG+           L   
Sbjct: 104 SIVIDRKSKTAILMLSREGGMDIEAVAKETPEKIFKIAIDPTIGLADFKAREAALKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF  LY+ F +KD SL EINPL+ +K+G L+ +D+K++FDDNALYRH DI 
Sbjct: 164 MAQVKQAIPLFQKLYQLFVEKDASLAEINPLVKLKDGSLKAIDAKMTFDDNALYRHPDIS 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + + E+ +E EAK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 AMFEPTVEEKKEHEAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ +D  VK +LINIFGGI RCD + KG++ A KE+K ++P+V+RL 
Sbjct: 284 GSSNPQKIVEAMKLLLADKHVKVVLINIFGGITRCDDVAKGLIEAFKEIKTDMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G     A  + +A +K V   K
Sbjct: 344 GTNEAEGRELLK--GTAFHVAATMSEAGRKAVELAK 377


>gi|145548656|ref|XP_001460008.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427836|emb|CAK92611.1| unnamed protein product [Paramecium tetraurelia]
          Length = 425

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 184/405 (45%), Positives = 255/405 (62%), Gaps = 14/405 (3%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFK 60
           ++HEYQ+K L+R++NV V KG +  +   A    K L P    ++KSQ+HAGGRGKG   
Sbjct: 20  DLHEYQSKDLMRRFNVQVQKGEIALNAEEAAKVAKKLDPSGGLILKSQVHAGGRGKGTL- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LY+
Sbjct: 79  --SSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLYI 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+LQ
Sbjct: 137 AFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLTDQIANKVIDTLQLQ 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    +   NLYK F   D + +EINP       +L  +D+KI+ DDNA +R  ++ 
Sbjct: 197 A-VRQQAIEQLKNLYKMFITLDATQVEINPWATDPKNKLFCIDAKINVDDNAKFRQKELI 255

Query: 241 ELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           ELR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PANF
Sbjct: 256 ELRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGDPANF 315

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PLV
Sbjct: 316 LDVGGGANVEQVKTAFEILNSHPKVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLV 375

Query: 357 MRLEGANVDIGNRLIAE-----SGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G +++ E     + +++ TA DLDDAAQK V   K
Sbjct: 376 VRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIAK 420


>gi|88607855|ref|YP_505609.1| succinyl-CoA synthetase, beta subunit [Anaplasma phagocytophilum
           HZ]
 gi|123494534|sp|Q2GJ42|SUCC_ANAPZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|88598918|gb|ABD44388.1| succinyl-CoA synthetase, beta subunit [Anaplasma phagocytophilum
           HZ]
          Length = 388

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 187/395 (47%), Positives = 260/395 (65%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  ++V V KGVV+ SV   +SA+ +L   +  VK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKGILSGFDVRVPKGVVVRSVEEVDSALGSLAAGIVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V   ++ +LGS L+T QT   G +V+ VY+E+G  I +E YL
Sbjct: 58  -------GGVKIGKAREEVADLVKSMLGSVLVTHQTSAAGQKVHAVYLEEGVSIKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR +GMV+ I S++GGMDIEEVA   P+ +  + +DP+ G        LC  L L+
Sbjct: 111 GAVVDRKAGMVSVIFSSEGGMDIEEVAHSRPEMVVVVNVDPVYGFLDFHGRKLCYGLGLK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +  +    +   + +A  + D S +EINPL+    G    LD+K++FDDN L+R  +I 
Sbjct: 171 KEQVVQITAMARKVCRALMETDASQVEINPLVETTCGEFIALDAKMTFDDNGLFRRPEIV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L D  E    E+EA ++ LSYI LDGNIGCMVNGAGLAMATMDI+K YGG PANFLDVG
Sbjct: 231 KLTDPHEYSEEELEAAKYGLSYIKLDGNIGCMVNGAGLAMATMDIVKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V  AFKII   S V GIL+NIFGGIMRCDV+  GI+ + KE+ +++P+V+RL 
Sbjct: 291 GGASKDTVREAFKIILR-SGVDGILVNIFGGIMRCDVIAAGIIESAKEIGVSVPMVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N  IG  ++  SGL+++TA +LD+AA+ +V  V
Sbjct: 350 GTNYKIGKEMLDASGLSIVTAENLDEAARFVVDLV 384


>gi|332826622|gb|EGJ99451.1| succinyl-CoA ligase subunit beta [Dysgonomonas gadei ATCC BAA-286]
          Length = 384

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 164/392 (41%), Positives = 226/392 (57%), Gaps = 19/392 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK L   Y +PV K V+ +  + A +A   L     VVK+Q+  GGRGK    
Sbjct: 1   MKIHEYQAKNLFSSYGIPVEKYVLCNVANEAVTAYDGLNMERVVVKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + V     +ILG ++           V  + V +  +I  E Y+
Sbjct: 58  -------GGVKLAKNREDVKQYATDILGMSIKEF-------PVTKIIVSEAVNIGSEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  + S +GGMDIEEVA+  P+KI K  IDP IGV           +  +
Sbjct: 104 SFVIDRNTKSVILMMSAEGGMDIEEVAEHSPEKIHKFAIDPFIGVPDYLARRFAFTIFEE 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK F DKD SL EINPL++ K G L  +D+K++FDDNALYR   I 
Sbjct: 164 INQVNQLAVILQKLYKLFVDKDASLAEINPLVLTKEGNLIAIDAKMTFDDNALYRQPQIH 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + +EE+  E  AK+   SY+ LDG IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 ALFEPTEEEKTEAYAKEKGFSYVHLDGEIGCMVNGAGLAMATMDMIKLYGGTPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +KV  A  ++  D  VK +LINIFGGI RCD +  G+L+A +++K +IP+++RL 
Sbjct: 284 GSSNPNKVIDAMTLLLKDPKVKVVLINIFGGITRCDDVASGLLTAFEQLKTDIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           G N   G  ++  +G     A  + +A Q  V
Sbjct: 344 GTNEKQGRDML--AGTRFKVAETMGEAVQLAV 373


>gi|56416522|ref|YP_153596.1| succinyl-CoA synthetase beta chain [Anaplasma marginale str. St.
           Maries]
 gi|255002862|ref|ZP_05277826.1| succinyl-CoA synthetase subunit beta [Anaplasma marginale str.
           Puerto Rico]
 gi|77416576|sp|Q5PBI8|SUCC_ANAMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|56387754|gb|AAV86341.1| succinyl-CoA synthetase beta chain [Anaplasma marginale str. St.
           Maries]
          Length = 388

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 196/395 (49%), Positives = 261/395 (66%), Gaps = 11/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  + V V +GVV+ SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKGVLSSFGVTVPRGVVVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S ++++L S LIT QT P G +VN VY+E+G DI +E Y+
Sbjct: 58  -------GGVKIGKTKDEVKSLVKQMLHSVLITHQTSPEGQKVNKVYLEEGVDIGKEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DIE VAK+ P  +  + +DPL G  S     LC    L 
Sbjct: 111 SAVVDRSVGRVSIIFSSEGGVDIETVAKERPNMVSVVHVDPLYGFRSFHGQELCRRFGLG 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I 
Sbjct: 171 PKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 231 KLQDPDEYAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +++PLV+RL 
Sbjct: 291 GGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVDVPLVVRLS 349

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 350 GTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 384


>gi|284046983|ref|YP_003397323.1| succinyl-CoA synthetase subunit beta [Conexibacter woesei DSM
           14684]
 gi|283951204|gb|ADB53948.1| succinyl-CoA synthetase, beta subunit [Conexibacter woesei DSM
           14684]
          Length = 384

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 153/397 (38%), Positives = 227/397 (57%), Gaps = 19/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K L  ++ +PV  G   ++V  A +A   +  P  VVK+Q+  GGRGK    
Sbjct: 1   MDLLEYQGKQLFARHGIPVPSGKPAATVQEAVAAADEIGYPC-VVKAQVLIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++            +ILG  +        G  V+ V++E  ++I  E Y 
Sbjct: 57  -------GGVKLAKDRAEATQYATDILGMDI-------KGFTVHEVWIEGASEIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++ DR +     + STQGGMDIEEVA+  P  + +L +DPL+G        L     + 
Sbjct: 103 SIVFDRAAKAPLVMLSTQGGMDIEEVAEKTPDALARLHVDPLLGFQDFHGRKLAFAAGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LY+ F  ++  L+E+NPLII     +  LD+K++ D N+LYRH D  
Sbjct: 163 GDLIRPVGAMLAKLYETFVAEEAMLIEVNPLIITPGRDVVALDAKVTLDGNSLYRHPDNA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S ED +E  A +  L+Y+ LDG+IG + NGAGL M+T+D++   GGAPANFLD G
Sbjct: 223 ALRDPSAEDPQEQMAHERGLTYVKLDGDIGILGNGAGLVMSTLDVVAQAGGAPANFLDAG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+  D + +A ++I SD+ V+ +L NIFGGI RCD + KG++ A   VK  +P V+RL+
Sbjct: 283 GGSKADAIVSAVEVILSDAKVRAVLFNIFGGITRCDEVAKGLIEAFDVVKPTVPFVVRLD 342

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVK 396
           G N   G +L+A++ L  V TA  +++AA+K+V   K
Sbjct: 343 GTNDVEGRKLLADANLPNVATAKTMNEAAEKVVELSK 379


>gi|62185364|ref|YP_220149.1| succinyl-CoA synthetase subunit beta [Chlamydophila abortus S26/3]
 gi|81312485|sp|Q5L593|SUCC_CHLAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|62148431|emb|CAH64199.1| succinyl-CoA synthetase beta chain [Chlamydophila abortus S26/3]
          Length = 386

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 158/396 (39%), Positives = 234/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V SSV      +  L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTSYAIPMPPYRVASSVEEGRHTLNELGINAGVVKVQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S + +++ + ++L    ++ QT      V  V +    +I  E YL
Sbjct: 58  -------GGVIVAKSPEEILAAVDQLLHMRFVSNQTSGEALPVEKVLITPLVNIAAEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +     + S  GG+DIEEVA+ YP +   + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPTIMLSKAGGVDIEEVAQKYPDQQLTISLTPFARLYNYQLRQMIKFMGWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  +  NL + F D D SLLEINPL+  + G L VLD+K++ DDNALYRH  ++
Sbjct: 171 GDTGKQGVQMIKNLVQCFYDNDASLLEINPLVRTQEGDLLVLDAKVTIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIALDGNIGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALDGNIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQIQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NV++G  ++  SG+       L+  AQ  V   K
Sbjct: 351 GTNVELGKEIVQCSGIPCKFTDSLNTGAQLAVALSK 386


>gi|145485378|ref|XP_001428697.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395785|emb|CAK61299.1| unnamed protein product [Paramecium tetraurelia]
          Length = 425

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 188/405 (46%), Positives = 257/405 (63%), Gaps = 14/405 (3%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFK 60
           ++HEYQ+K L+RK+NV V KG +  +  AA    KTL P    ++KSQ+HAGGRGKG   
Sbjct: 20  DLHEYQSKDLMRKFNVLVQKGEIALNADAAAKVAKTLDPSGGLILKSQVHAGGRGKGTL- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LYL
Sbjct: 79  --SSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+LQ
Sbjct: 137 AFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLTDQIANKVIDTLQLQ 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    +   NLYK F   D + +EINP       +L  +D+KI+ DDNA +R  ++ 
Sbjct: 197 A-VRQQAIEQLKNLYKMFITLDATQVEINPWATDPKNKLFCIDAKINVDDNAKFRQKELI 255

Query: 241 ELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           ELR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PANF
Sbjct: 256 ELRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGDPANF 315

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PLV
Sbjct: 316 LDVGGGANVEQVKTAFEILNSHPKVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLV 375

Query: 357 MRLEGANVDIGNRLIAE-----SGLNVITAIDLDDAAQKIVHAVK 396
           +RL G N   G +++ E     + +++ TA DLDDAAQK V   K
Sbjct: 376 VRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIAK 420


>gi|119617914|gb|EAW97508.1| hCG1791842, isoform CRA_a [Homo sapiens]
          Length = 427

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 154/386 (39%), Positives = 221/386 (57%), Gaps = 4/386 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E Q+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 34  LSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  K GV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 93  --NSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+D++      + S Q G+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 151 AILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA ++  DI 
Sbjct: 211 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIF 270

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L G  PA+FLD+G
Sbjct: 271 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLG 330

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG  + +V  AF + T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+ LE
Sbjct: 331 GGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLE 390

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G NV     ++  S L + +A+DL+D
Sbjct: 391 GTNVQEAQEIL-NSRLPITSAVDLED 415


>gi|225012702|ref|ZP_03703137.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-2A]
 gi|225003235|gb|EEG41210.1| succinyl-CoA synthetase, beta subunit [Flavobacteria bacterium
           MS024-2A]
          Length = 397

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 176/406 (43%), Positives = 248/406 (61%), Gaps = 21/406 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  + V + +G+V  +   A +A K L        ++VK+QIHA     
Sbjct: 1   MNLHEYQGKEVLAGFGVTIQRGIVAKTAAEAVAAGKQLTETTGTQWHIVKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
                      GGV++  +L+ + S    I+G  LIT QT P G +VN + V +     G
Sbjct: 56  -----GGRGKGGGVKLAKNLQELESVATSIIGMQLITPQTPPEGKKVNQILVAEDVYYPG 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           A    E Y+S+L++R +G    + ST+GGMDIE VA+  P  IF   IDP +G+      
Sbjct: 111 ASEPSEFYMSILLNRATGKNMIMYSTEGGMDIEAVAEVTPHLIFTEEIDPALGLLPFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G A  D       LY+A+   D SL EINP++   + R+  +D+K++ DDN
Sbjct: 171 KVAFNLGLSGAAFKDMTKFVSALYRAYVGSDASLFEINPVLKTSDDRIIAVDAKVTIDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           +L+RH D + LRD+SEE+  E+EA+   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 SLFRHPDFEALRDLSEENPVEVEARSVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF++I  D +VK ILINIFGGI+RCD + +GI+ A K +  
Sbjct: 291 DPANFLDVGGTADAARVEIAFRLILKDPAVKAILINIFGGIVRCDRVAQGIVDAYKNLGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            I +P+++RL+G N DI  +LI  SGLNV++A    +AA K+  A+
Sbjct: 351 AIQVPIIVRLQGTNADIAKKLIDSSGLNVLSATAFQEAADKVQEAI 396


>gi|89898036|ref|YP_515146.1| succinyl-CoA synthetase subunit beta [Chlamydophila felis Fe/C-56]
 gi|123483722|sp|Q255N7|SUCC_CHLFF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|89331408|dbj|BAE81001.1| succinyl-CoA synthetase beta chain [Chlamydophila felis Fe/C-56]
          Length = 388

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 156/398 (39%), Positives = 238/398 (59%), Gaps = 10/398 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y++ +    ++SSV   E  ++ L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLSSYDIAIPPYRIVSSVEEGELVLRELGINAGVVKVQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S   +++ I ++L     + QT      V  V +    +I  E YL
Sbjct: 58  -------GGVIIAKSSSEILAAIGKLLKMRFESNQTSGESLPVEKVLITPLVNIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR +   A + S  GGMDIEEVA+ YP ++  + + P   + +  +  +   +  +
Sbjct: 111 AVIMDRKNRCPAIMLSKAGGMDIEEVAQKYPDQLLTVPLTPSARIYNYQLRQIIKFMNWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L   L + F D D SLLEINPL++ +   L VLD+K++ DDNALYRH  ++
Sbjct: 171 GDTGKQGVQLIKKLVQCFYDNDASLLEINPLVLTQEEELLVLDAKVTIDDNALYRHPKLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AK+  LSYIALDG+IGC+VNGAGLAM+T+DI+K++GG+ ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKKIGLSYIALDGDIGCLVNGAGLAMSTLDILKIHGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + INIFGGIM C  +  G+++ ++  +  IP V+RLE
Sbjct: 291 GSATEQQIQEAVSLVLSDENVEVLFINIFGGIMDCSAVASGLVAVMQTRENLIPTVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G NV++G  ++  SG+       L++ A+  V   K V
Sbjct: 351 GTNVELGKEIVQRSGIPCQFTDSLNEGARLAVALSKQV 388


>gi|15618881|ref|NP_225167.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           CWL029]
 gi|15836505|ref|NP_301029.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           J138]
 gi|16752058|ref|NP_445424.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           AR39]
 gi|33242340|ref|NP_877281.1| succinyl-CoA synthetase subunit beta [Chlamydophila pneumoniae
           TW-183]
 gi|21264064|sp|Q9Z6T6|SUCC_CHLPN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|4377299|gb|AAD19110.1| Succinyl-CoA Synthetase, Beta [Chlamydophila pneumoniae CWL029]
 gi|7189799|gb|AAF38674.1| succinyl-CoA synthetase, beta subunit [Chlamydophila pneumoniae
           AR39]
 gi|8979346|dbj|BAA99180.1| succinyl-CoA synthetase, beta [Chlamydophila pneumoniae J138]
 gi|33236851|gb|AAP98938.1| succinate-CoA ligase beta chain [Chlamydophila pneumoniae TW-183]
          Length = 386

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 166/395 (42%), Positives = 234/395 (59%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y+VP+    V+SS    E  I        VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLASYDVPIPPYWVVSSEEEGELLITKSGLDSAVVKVQVHAGGRGKH--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   ++  + ++LG    + QT      V  V +     I RE Y+
Sbjct: 58  -------GGVIVAKSSAGILQAVAKLLGMHFTSNQTADGFLPVEKVLISPLVAIQREYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMDIEEVA   P++I  L +     + S  +      +E +
Sbjct: 111 AVIMDRKHRCPVLMLSKAGGMDIEEVAHSSPEQILTLPLTSYGHIYSYQLRQATKFMEWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+    G  L   L K F + D+SLLEINPL++   G L VLDSKI+ DDNALYRH +++
Sbjct: 171 GEVMHQGVQLIKKLAKCFYENDVSLLEINPLVLTLEGELLVLDSKITIDDNALYRHPNLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIAL GNIGC+VNGAGLAM+T+DI+KL+GG  ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALSGNIGCIVNGAGLAMSTLDILKLHGGNAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q ++  A  ++ SD SVK + INIFGGIM C V+  G+++ ++     +P V+RLE
Sbjct: 291 GGASQKQIQEAVSLVLSDESVKVLFINIFGGIMDCSVVASGLVAVMETRDQVVPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G  ++ +SG+       +++ A++ V   
Sbjct: 351 GTNVELGKEIVQQSGIPCQFVSSMEEGARRAVELS 385


>gi|145521150|ref|XP_001446430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413908|emb|CAK79033.1| unnamed protein product [Paramecium tetraurelia]
          Length = 426

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 185/405 (45%), Positives = 254/405 (62%), Gaps = 15/405 (3%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFK 60
           ++HEYQ+K L+R +NV V KG +  +   A    KTL P    ++KSQ+HAGGRGKG   
Sbjct: 20  DLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGKGTL- 78

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  + + V +  ++++G  L+T QT   G +VN V V +G DI+R+LYL
Sbjct: 79  --SSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLYL 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR S   A +AS  GGM+IEEVAK  P  I  L ID   G+T +    + D L+LQ
Sbjct: 137 AFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLTDQIANKVVDTLQLQ 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPL-IIMKNGRLRVLDSKISFDDNALYRHLDI 239
              R    +   NLYK F   D + +EINP        +L  +D+KI+ DDNA +R  ++
Sbjct: 197 -SVRQQAVEQLRNLYKMFISLDATQVEINPWQATDPKNQLFCIDAKINVDDNAKFRQKEL 255

Query: 240 QELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            ELR  S    + D  E  A    L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYGG PAN
Sbjct: 256 VELRKTSVASEQVDPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGEPAN 315

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGGA+ ++V  AF+I+ S   V+ ILINIFGGIM+C+++ +GI+ A + V +  PL
Sbjct: 316 FLDVGGGANVEQVKTAFEILNSHPRVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPL 375

Query: 356 VMRLEGANVDIGNRLIAE-----SGLNVITAIDLDDAAQKIVHAV 395
           V+RL G N   G +++ E     + +++ TA DLDDAAQK V   
Sbjct: 376 VVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAAQKSVKIA 420


>gi|148244314|ref|YP_001219008.1| succinyl-CoA synthetase beta subunit [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326141|dbj|BAF61284.1| succinyl-CoA synthetase beta subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 180/396 (45%), Positives = 263/396 (66%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+IHEYQAK L    ++   KG++I SV  A  A KTL G ++VVK+QIHA         
Sbjct: 1   MHIHEYQAKTLFNHKHIQTPKGILIYSVDQASDACKTLGGSIWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +  S++ V +   ++L S LIT QT   G  V+ + +E G +I  E YL
Sbjct: 52  -GGRGKGGGIILCRSIEEVKNACSQLLNSQLITPQTYAKGLPVSQLLIEIGENITHEFYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            LL+DR +  +  +AST+GGMDIE+VA+  P +I K  I+PL  ++ +D A +   L+L 
Sbjct: 111 GLLIDRQTKKITVLASTKGGMDIEKVARKTPNQIIKFGINPLGHLSVQDCAFMAKKLDLH 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   LY+ F  KD++L+EINPL+I K  +L  LD KI FDDNALYRH DI 
Sbjct: 171 FKFTKQFNNILLGLYEIFTQKDVNLIEINPLVITKENKLLALDGKIDFDDNALYRHKDII 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD+S+ED +E  A  ++L+YI+L+G IGCMVNGAGLAMATMD+I+ +GG+PANFLDVG
Sbjct: 231 ALRDISQEDEKERLANIYHLNYISLNGTIGCMVNGAGLAMATMDLIEHFGGSPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    D+VA AF++I ++ ++KGIL+NIFGGI+ CD++ +GIL A+++V++ +P+V+RLE
Sbjct: 291 GDTTADRVAKAFELIQTEENIKGILVNIFGGIVHCDLIAQGILQAIEKVRLTLPIVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G +L+ ++ +++ T  DL+ A  KI+   K
Sbjct: 351 GTNATDGLKLLDKAKVDIHTESDLNKATIKIIKLAK 386


>gi|330752479|emb|CBL87428.1| Succinyl-CoA synthetase beta chain [uncultured Flavobacteria
           bacterium]
          Length = 403

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 176/396 (44%), Positives = 240/396 (60%), Gaps = 13/396 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT----LPGPLYVVKSQIHAGGRGK 56
           MNIHEYQ K++L+ + V + +G V  +  AA  A            +VVK+QIHAGGRGK
Sbjct: 1   MNIHEYQGKSILQSFGVAIQRGKVADTPEAAHEAAVALAEETGTEWFVVKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-----G 111
           G   E  +    GV +   L  V      ILG  L+T QT   G +VN + + +     G
Sbjct: 61  GVVTETGSH---GVVLAKGLDHVKEKAAGILGGHLVTAQTSKDGKQVNKILIAEDVYYPG 117

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E Y+S+L+DR +G    + S +GGMDIE VA+  P  IFK  +DP +G+      
Sbjct: 118 ESEPSEYYMSVLLDRATGHNIIMYSPEGGMDIEAVAEATPHLIFKEEVDPAVGLQGFQSR 177

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L GQA          LY A+   D S+ EINP++   + ++  +DSK+S D N
Sbjct: 178 RIAFNLGLSGQAFKQMVKFTQALYAAYIGCDASMFEINPVLKTSDDKIIAVDSKVSLDGN 237

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL RH D   +RD +EED+ E+EA +  L+Y+ LDGN+GCMVNGAGLAMATMDIIKL GG
Sbjct: 238 ALSRHPDYAAMRDKTEEDATEVEADEAGLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGG 297

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLDVGG AD  +V  AF+II  D +VK IL+NIFGGI+RCD + +G++ A K +  
Sbjct: 298 EPANFLDVGGTADAARVEKAFRIILKDPAVKAILVNIFGGIVRCDRVAQGVVDACKNMSD 357

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           IN+P+++RL+G N +   ++I ESGL V +AI L +
Sbjct: 358 INVPIIVRLQGTNAEEAKKIIDESGLEVRSAILLKE 393


>gi|222474890|ref|YP_002563305.1| succinyl-CoA synthetase beta chain (sucC) [Anaplasma marginale str.
           Florida]
 gi|222419026|gb|ACM49049.1| succinyl-CoA synthetase beta chain (sucC) [Anaplasma marginale str.
           Florida]
          Length = 399

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 260/394 (65%), Gaps = 11/394 (2%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+HE+QAK +L  + V V +GVV+ SV   +  +  L   L  VK+QIHAGGRGK     
Sbjct: 13  NVHEFQAKGVLSSFGVTVPRGVVVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA---- 68

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  +   V S ++++L S LIT QT P G +VN VY+E+G DI +E Y+S
Sbjct: 69  ------GGVKIGKTKDEVKSLVKQMLHSVLITHQTSPEGQKVNKVYLEEGVDIGKEYYIS 122

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            +VDR+ G V+ I S++GG+DIE VAK+ P  +  + +DPL G  S     LC    L  
Sbjct: 123 AVVDRSVGRVSIIFSSEGGVDIETVAKERPNMVSVVHVDPLYGFRSFHGQELCRRFGLGP 182

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +       +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I +
Sbjct: 183 KQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEIAK 242

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
           L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDVGG
Sbjct: 243 LQDPDEYAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVGG 302

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           GA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +++PLV+RL G
Sbjct: 303 GANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVDVPLVVRLSG 361

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 362 TNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 395


>gi|269302763|gb|ACZ32863.1| succinyl-CoA synthetase, beta subunit [Chlamydophila pneumoniae
           LPCoLN]
          Length = 386

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 165/395 (41%), Positives = 235/395 (59%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y+VP+    V+SS    E  I        VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLASYDVPIPPYWVVSSEEEGELLITKSGLDSAVVKVQVHAGGRGKH--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S   ++  + ++LG    + QT      V  V +     I RE Y+
Sbjct: 58  -------GGVIVAKSSAGILQAVAKLLGMHFTSNQTADGFLPVEKVLISPLVAIQREYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMD+EEVA+  P++I  L +     + S  +      +E +
Sbjct: 111 AVIMDRKHRCPVLMLSKAGGMDVEEVAQSSPEQILTLPLTSYGHIYSYQLRQATKFMEWE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+    G  L   L K F + D+SLLEINPL++   G L VLDSKI+ DDNALYRH +++
Sbjct: 171 GEVMHQGVQLIKKLAKCFYENDVSLLEINPLVLTLEGELLVLDSKITIDDNALYRHPNLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L D S+E+ R++ AKQ  LSYIAL GNIGC+VNGAGLAM+T+DI+KL+GG  ANFLDVG
Sbjct: 231 VLYDPSQENVRDVLAKQIGLSYIALSGNIGCIVNGAGLAMSTLDILKLHGGNAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q ++  A  ++ SD SVK + INIFGGIM C V+  G+++ ++     +P V+RLE
Sbjct: 291 GGASQKQIQEAVSLVLSDESVKVLFINIFGGIMDCSVVASGLVAVMETRDQVVPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NV++G  ++ +SG+       +++ A++ V   
Sbjct: 351 GTNVELGKEIVQQSGIPCQFVSSMEEGARRAVELS 385


>gi|311269133|ref|XP_003132357.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial [Sus scrofa]
          Length = 395

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 158/358 (44%), Positives = 219/358 (61%), Gaps = 3/358 (0%)

Query: 38  LPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTG 97
           L     V+K+QI AGGRGKG F    +  KGGV +    + V    ++++G  L TKQT 
Sbjct: 38  LNAKEIVLKAQILAGGRGKGVF---SSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTP 94

Query: 98  PTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
             G +VN V V +  DI RE YL++L+DR+      + S QGG+DIEEVA   P+ IFK 
Sbjct: 95  KEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKE 154

Query: 158 LIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ID + G+       + + L   G  +    D    LY  F   D + +E+NP      G
Sbjct: 155 QIDIIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEG 214

Query: 218 RLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAG 277
           ++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI LDGNI C VNGAG
Sbjct: 215 QVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAG 274

Query: 278 LAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDV 337
           LAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ IL+NIFGGI+ C +
Sbjct: 275 LAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAI 334

Query: 338 LVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +  GI  A +E+++ +PLV+RLEG NV     ++  SGL + +A+DL+DAA+K V +V
Sbjct: 335 IANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASV 392


>gi|183221438|ref|YP_001839434.1| succinyl-CoA synthetase subunit beta [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167779860|gb|ABZ98158.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 403

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 258/398 (64%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVV--KSQIHAGGRGKGR 58
           M +HEYQAK +LR++N  V  G VI +V   E A   +     VV  K+QIHA       
Sbjct: 15  MKVHEYQAKEILRRHNANVPFGKVIDAVGDFEKAYNEVVQKSPVVVVKAQIHA------- 67

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV+V  +     +   +ILG  LIT QTGP G +V  VY+E G +I +E 
Sbjct: 68  ---GGRGKGGGVKVAKTKDDAKAAAEKILGMQLITPQTGPEGKKVLKVYLEQGLEIAKEY 124

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR       +AST+GGM+IEEVA+ +P+KI K+ IDP IG+    V  L   L 
Sbjct: 125 YLSILLDRAIRKTIIMASTEGGMEIEEVAETHPEKIIKIQIDPGIGIQGSQVRELAFALG 184

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           +  +A+     L  ++Y A+  +D +LLEINPLI+ K   +   D K+  D+NALYRH D
Sbjct: 185 IPTEAQKSFTALVNSVYNAYIKEDAALLEINPLILTKQNEIIAGDCKMDLDENALYRHPD 244

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + LRD++EED  E++AK++NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANFLD
Sbjct: 245 NEALRDITEEDPYEVKAKEYNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANFLD 304

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA+   V   F++I SD +VKGI +N+FGGI+RCD +  GI+ A K+V +++P+V+R
Sbjct: 305 VGGGANPTTVENGFRLILSDPNVKGIFVNVFGGIVRCDRVAVGIIEATKKVNVSVPVVVR 364

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N + G +++ ESG+N++    L DAA KIV  +K
Sbjct: 365 LKGTNAEEGKKILNESGMNIVGVEGLRDAADKIVSLIK 402


>gi|32484342|gb|AAH54425.1| Suclg2 protein [Mus musculus]
          Length = 374

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 159/365 (43%), Positives = 217/365 (59%), Gaps = 3/365 (0%)

Query: 22  GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
             V ++   A  A K L     V+K+QI AGGRGKG F    +  KGGV +    K V  
Sbjct: 1   FFVANTAKEALEAAKRLNAKEIVLKAQILAGGRGKGVF---NSGLKGGVHLTKDPKVVGE 57

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGM 141
             ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+
Sbjct: 58  LAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGV 117

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           DIEEVA   P+ IFK  ID   G+       + + L   G  +    D    LY  F   
Sbjct: 118 DIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKI 177

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L 
Sbjct: 178 DATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAARYDLK 237

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++TSD  V
Sbjct: 238 YIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKV 297

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
           + IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV     ++  SGL + +A
Sbjct: 298 EAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSA 357

Query: 382 IDLDD 386
           +DL+D
Sbjct: 358 VDLED 362


>gi|218884352|ref|YP_002428734.1| succinyl-CoA synthetase, beta subunit [Desulfurococcus
           kamchatkensis 1221n]
 gi|254778437|sp|B8D5I6|SUCC_DESK1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|218765968|gb|ACL11367.1| succinyl-CoA synthetase, beta subunit [Desulfurococcus
           kamchatkensis 1221n]
          Length = 379

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 160/400 (40%), Positives = 236/400 (59%), Gaps = 24/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K + RKY +   +G++ +SV   + A + L     V+KSQ+  GGRG     
Sbjct: 1   MKLYEYEGKEIARKYGIETPRGILATSVEDVDKAYRELNTGTVVLKSQVLVGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  S+L+  ++  RE+   ++        G RV  + VE+   I RELY+
Sbjct: 58  -------GGVKKASNLEEALTKARELFSMSI-------KGERVEKILVEEAVCISRELYM 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL VDR +  + ++AS  GG++IEE+A+ +P KI ++ +DP IG +          L LQ
Sbjct: 104 SLTVDRATRKLVYLASGMGGVEIEELARKHPDKILRIPVDPFIGYSGYMARHALGFLGLQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   +YK   D D  L+E NPL    +GRL  LD+KI  DDN+LYRH D+Q
Sbjct: 164 WDKLGQLDNIMRAMYKIMIDYDAELVEFNPLAYTCDGRLTALDAKIIIDDNSLYRHPDLQ 223

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            L  RD +     E  AKQ + +Y+ LDG+IG + NGAGL MATMD I  YGG PANFLD
Sbjct: 224 PLYGRDAT---PYEKVAKQLDFNYVELDGDIGVISNGAGLTMATMDSILHYGGRPANFLD 280

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA +++V  A KI+ +   VK +L+NIFGGI RCD +  GI+ A+ E K+  P+V+R
Sbjct: 281 IGGGATRERVREAVKIVVTHPRVKAVLVNIFGGITRCDEVASGIVEALSETKVAKPIVVR 340

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           + G N + G R++ E G+ V T  ++D+A  +I+  V+GV
Sbjct: 341 MLGTNEEEGRRILIEHGITVYT--EMDEAVLRIIQLVRGV 378


>gi|189911526|ref|YP_001963081.1| succinyl-CoA synthetase subunit beta [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|226734962|sp|B0SAP0|SUCC_LEPBA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167776202|gb|ABZ94503.1| Succinyl-CoA synthetase, beta subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
          Length = 389

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 187/398 (46%), Positives = 258/398 (64%), Gaps = 12/398 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVV--KSQIHAGGRGKGR 58
           M +HEYQAK +LR++N  V  G VI +V   E A   +     VV  K+QIHA       
Sbjct: 1   MKVHEYQAKEILRRHNANVPFGKVIDAVGDFEKAYNEVVQKSPVVVVKAQIHA------- 53

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV+V  +     +   +ILG  LIT QTGP G +V  VY+E G +I +E 
Sbjct: 54  ---GGRGKGGGVKVAKTKDDAKAAAEKILGMQLITPQTGPEGKKVLKVYLEQGLEIAKEY 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+L+DR       +AST+GGM+IEEVA+ +P+KI K+ IDP IG+    V  L   L 
Sbjct: 111 YLSILLDRAIRKTIIMASTEGGMEIEEVAETHPEKIIKIQIDPGIGIQGSQVRELAFALG 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           +  +A+     L  ++Y A+  +D +LLEINPLI+ K   +   D K+  D+NALYRH D
Sbjct: 171 IPTEAQKSFTALVNSVYNAYIKEDAALLEINPLILTKQNEIIAGDCKMDLDENALYRHPD 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            + LRD++EED  E++AK++NL+Y+ LDGNIGCMVNGAGLAMATMDI+KL G  PANFLD
Sbjct: 231 NEALRDITEEDPYEVKAKEYNLNYVKLDGNIGCMVNGAGLAMATMDIVKLAGAEPANFLD 290

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGGGA+   V   F++I SD +VKGI +N+FGGI+RCD +  GI+ A K+V +++P+V+R
Sbjct: 291 VGGGANPTTVENGFRLILSDPNVKGIFVNVFGGIVRCDRVAVGIIEATKKVNVSVPVVVR 350

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L+G N + G +++ ESG+N++    L DAA KIV  +K
Sbjct: 351 LKGTNAEEGKKILNESGMNIVGVEGLRDAADKIVSLIK 388


>gi|166154165|ref|YP_001654283.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 434/Bu]
 gi|166155040|ref|YP_001653295.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335409|ref|ZP_07223653.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis L2tet1]
 gi|226734936|sp|B0B950|SUCC_CHLT2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734938|sp|B0BAS9|SUCC_CHLTB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|165930153|emb|CAP03637.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis 434/Bu]
 gi|165931028|emb|CAP06591.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 386

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/396 (40%), Positives = 236/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVEAAIQAEQWKAGVVKAQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      VN V +    +I  E YL
Sbjct: 58  -------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPVNKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH ++ 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPELA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  +I  +G+       + + A+  V   +
Sbjct: 351 GTNVDKGKGMIINAGIPCEFVTSMSEGAELAVQLSR 386


>gi|315607959|ref|ZP_07882952.1| succinyl-CoA ligase subunit beta [Prevotella buccae ATCC 33574]
 gi|315250428|gb|EFU30424.1| succinyl-CoA ligase subunit beta [Prevotella buccae ATCC 33574]
          Length = 377

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 232/396 (58%), Gaps = 19/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK     Y +PV   ++  +   A +A K L     VVK+Q+H GGRGK    
Sbjct: 1   MKVHEYQAKGFFASYGLPVDNSILCFTPDEAVAAYKKLGVERAVVKAQVHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S   V      IL   +        G  V+ V V +  DI  E Y+
Sbjct: 58  -------GGVKLAGSETEVRVCAEAILRMNI-------KGFTVDRVLVGEAVDIAAEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR S     + S +GGMDIE VAK+ P+KIFK+ IDP IG+           L   
Sbjct: 104 SIVIDRKSKTAILMLSREGGMDIEAVAKETPEKIFKIAIDPTIGLADFKAREAALKLFDD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    LF  LY+ F +KD SL EINPL+ +K+G L+ +D+K++FDDNALYRH DI 
Sbjct: 164 MAQVKQAIPLFQKLYQLFVEKDASLAEINPLVKLKDGSLKAIDAKMTFDDNALYRHPDIS 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + +EE+ +E EAK+   SY+ L G IGCMVNGAGLAMATMD+IKLYGG PANFLD+G
Sbjct: 224 AMFEPTEEEKKEHEAKEKGFSYVNLGGEIGCMVNGAGLAMATMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  K+  A K++ +D  VK +LINIFGGI RCD + KG++ A KE+K ++P+V+RL 
Sbjct: 284 GSSNPQKIVEAMKLLLADKHVKVVLINIFGGITRCDDVAKGLIEAFKEIKTDMPIVIRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N   G  L+   G     A  + +A +K V   K
Sbjct: 344 GTNEAEGRELLK--GTAFHVAATMSEAGRKAVELAK 377


>gi|159901081|ref|YP_001547328.1| succinyl-CoA synthetase subunit beta [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|226734958|sp|A9B0I2|SUCC_HERA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|159894120|gb|ABX07200.1| succinyl-CoA synthetase, beta subunit [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 378

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 166/397 (41%), Positives = 243/397 (61%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ ++ +Y +PV  G V ++    +   + + GP+ V K+Q+H GGRGK    
Sbjct: 1   MKLHEYQARDIVARYGIPVTGGGVAATAEEVQKVAEQIGGPVAV-KAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++        + ILG  +        G  V  V V +     +E+YL
Sbjct: 57  -------GGIKLANTPAEAFDAGKAILGMDI-------KGLTVEKVLVAEAITFEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +  V  IAS++GG++IEEVAK  P  I KL  DPL+G+       L   + + 
Sbjct: 103 GVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQELAYSIGIT 162

Query: 181 G-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +       +   LY+AF + D  L EINPL+++ NG+L+ LDSKI  DD+ L+RH ++
Sbjct: 163 DAKQARQFSSIATGLYRAFVENDAELAEINPLVVLPNGQLQALDSKIVLDDSGLFRHSEV 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             +RD++ E   EI+A+++ L++I LDGNIGCMVNGAGLAMATMD++ L+GG PANFLD+
Sbjct: 223 AGMRDIAGEPESEIKARENGLTFIKLDGNIGCMVNGAGLAMATMDVVNLFGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA+  KVAAA  II  D +VK +++NIFGGI RCD + KGI+ A K +K  +P+V+RL
Sbjct: 283 GGGANAQKVAAALDIILDDPNVKVVMVNIFGGITRCDEVAKGIVEAQKIIKRQVPMVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N   G R++A++ L    A  L DAAQK V   K
Sbjct: 343 VGTNEAEGQRILADASLT--PASTLADAAQKAVDIAK 377


>gi|159466792|ref|XP_001691582.1| succinate-coa ligase beta chain, minor isoform [Chlamydomonas
           reinhardtii]
 gi|158278928|gb|EDP04690.1| succinate-coa ligase beta chain, minor isoform [Chlamydomonas
           reinhardtii]
          Length = 382

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 169/386 (43%), Positives = 249/386 (64%), Gaps = 7/386 (1%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGG 69
           + K+ V V  G+  +++   + A+  +       V+KSQI AGGRG G+F       +GG
Sbjct: 1   MSKFGVNVPPGIPATTLDEVKKAVDQMADEKGEVVIKSQILAGGRGLGKF---TNGLQGG 57

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V +       +   +++LG+TL+TKQTGP G  VN + +     + RE+Y ++L+DR + 
Sbjct: 58  VHIVP-KAKALELAKQMLGATLVTKQTGPAGKPVNTLLISKKMKLKREMYFAILLDRKTA 116

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               I  ++GG  IE++A+ +P+KI K+ ID  +G+T      + + L + G        
Sbjct: 117 GPMMIGCSEGGTSIEDLAEKFPEKIIKIPIDIRVGITDAQAMQMVEGLRVTGDKAAAAKQ 176

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           +   LY  F   D +++E+NPL    +G L   D+K+ FDDNA YR   I +++D S+ D
Sbjct: 177 I-KALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAYRQKPIFDMKDESQID 235

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
            RE+ A +++L+YI LDG+IGCMVNGAGLAMATMDIIK++GGAPANFLDVGG A++ +V 
Sbjct: 236 PREVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPANFLDVGGSANEQQVV 295

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFKI+T D  VK IL+NIFGGIM+CDV+  GI++A K+V + +PLV+RLEG NV  G  
Sbjct: 296 EAFKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVPLVVRLEGTNVARGKE 355

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAV 395
           ++A SG+ +ITA DLDDAA+K V ++
Sbjct: 356 ILATSGMTIITADDLDDAAKKAVASI 381


>gi|15834828|ref|NP_296587.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum Nigg]
 gi|270284994|ref|ZP_06194388.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum Nigg]
 gi|270289017|ref|ZP_06195319.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum Weiss]
 gi|301336391|ref|ZP_07224593.1| succinyl-CoA synthetase subunit beta [Chlamydia muridarum
           MopnTet14]
 gi|21264060|sp|Q9PL99|SUCC_CHLMU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|7190245|gb|AAF39080.1| succinyl-CoA synthetase, beta subunit [Chlamydia muridarum Nigg]
          Length = 386

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 158/396 (39%), Positives = 234/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +S+  AE AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTSYQLPIPPYHVATSLSEAEVAIQAEQWRSGVVKAQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S + +++    +L     + QT      VN V +    +I  E Y+
Sbjct: 58  -------GGVIVARSPEDLLAATDRLLHMQFSSNQTAGLSLPVNKVLISPLVEIALEYYI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEE+A+  P  + K+ +     + +  +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKSGGIDIEEIAEKQPDLLLKIALPSSGKIYAYQLRHIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F D D SLLEINPL++ K+G L +LD+KI+ DDNALYRH  + 
Sbjct: 171 KLVADRGNHIIRKLLQCFYDNDASLLEINPLVLTKDGDLIILDAKITIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DWYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD +V+ + I+IFGGIM C V+  G++SA++  + +IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKNVRVLFIHIFGGIMDCAVVASGLVSAMQGQQGSIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  +I  SG+       + + A+  V   +
Sbjct: 351 GTNVDKGKEIILRSGIPCEFVASMSEGAELAVKLSR 386


>gi|237803253|ref|YP_002888447.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           B/Jali20/OT]
 gi|231274487|emb|CAX11283.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 386

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      +N V +    +I  E YL
Sbjct: 58  -------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMDIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGMDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  +I  +G+       + + A+  V   +
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELAVQLSR 386


>gi|297620665|ref|YP_003708802.1| Succinyl-CoA synthetase, beta subunit [Waddlia chondrophila WSU
           86-1044]
 gi|297375966|gb|ADI37796.1| Succinyl-CoA synthetase, beta subunit [Waddlia chondrophila WSU
           86-1044]
          Length = 388

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 168/385 (43%), Positives = 233/385 (60%), Gaps = 10/385 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HE+QAK +L KY +P+    VIS +   ES I  L     V+K Q+HAGGRGK    
Sbjct: 1   MNTHEFQAKKILEKYGMPIPPFRVISDLSELESVISDLALDQAVIKVQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + + +    +E+LG  ++  QTG  G   + + +    D  +E Y+
Sbjct: 58  -------GGVKLAKTPEQIREAAKELLGMKIVNNQTGEEGVVAHKILITALTDYRKEYYM 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +     + S  GG+DIEEVA+  P +I KL +       +  +  L   +   
Sbjct: 111 GAVIDRQNARAVLMVSPDGGVDIEEVAEKTPDRILKLPMSLNGTFRNYQLIELVKFMGWS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +    G  L   L KAF D D SL EINPL+  + G L VLD+K+S DDNALYR  +I 
Sbjct: 171 KETAKQGIALAKGLAKAFMDSDASLFEINPLVETEEGDLLVLDAKLSVDDNALYRQKEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D ++    E  A +HNL+Y++L+G +GCMVNGAGLAMATMD++  +GG PANFLDVG
Sbjct: 231 SFYDETQIPKNEAMAHEHNLAYVSLEGEVGCMVNGAGLAMATMDMVYHFGGTPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++KVA  FKII +D +VK IL+NIFGGIM C  L  GI++AV E+K+ +PLV+R+E
Sbjct: 291 GGASKEKVAEGFKIILTDPNVKAILVNIFGGIMNCATLASGIVAAVNELKLQVPLVVRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G NVD G R++A SGLN+  A  + 
Sbjct: 351 GTNVDEGRRILAGSGLNIDIADSMT 375


>gi|328950885|ref|YP_004368220.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451209|gb|AEB12110.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Marinithermus
           hydrothermalis DSM 14884]
          Length = 377

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 153/397 (38%), Positives = 212/397 (53%), Gaps = 22/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +L +Y VPV  G V  +   A+   K       V+K+Q+H GGRGK    
Sbjct: 1   MKLHEYQAKEILARYGVPVPPGKVAYTPEEADRIAKEFG-KTVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++             ILG  +        G  V  V V +  DI +E Y 
Sbjct: 57  -------GGVKLAE-PHEAKEVAGRILGMNI-------KGLTVKKVLVAEAVDIAKEYYA 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR S  V  + S +GG+DIEEVA   P+ I K  IDP  G+   +   +     L+
Sbjct: 102 GLILDRASQRVVLMVSKEGGVDIEEVAARNPEAIIKYPIDPHKGLRPFEAREIVKRAGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY A+   D  L EINPL++  +G++   D+KI  +DNALYRH D+ 
Sbjct: 162 GNL-NKLAAVLVQLYNAYVGVDAFLAEINPLVVTTDGQIVAADAKIDLEDNALYRHPDLA 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+V  E   EIEA  +  +Y+ LDG++G + NGAGL M T+D++   GG PANFLD+G
Sbjct: 221 ELREVEAEHPLEIEASNYGFAYVKLDGDVGIIGNGAGLVMYTLDLVNRAGGKPANFLDIG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKGI INIFGGI R D + KG++ A++E  +  P+ MR+ 
Sbjct: 281 GGAKADVVYNAVKLVARDPDVKGIFINIFGGITRADEVAKGVIRALEEGLLTKPVAMRVA 340

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   RL+   G  +       +AA+ IV  V G
Sbjct: 341 GTAEEEAKRLLE--GKPIYMYPTSIEAAKAIVAMVGG 375


>gi|226227052|ref|YP_002761158.1| succinyl-CoA synthetase beta chain [Gemmatimonas aurantiaca T-27]
 gi|259511783|sp|C1A8X8|SUCC_GEMAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226090243|dbj|BAH38688.1| succinyl-CoA synthetase beta chain [Gemmatimonas aurantiaca T-27]
          Length = 381

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 157/395 (39%), Positives = 222/395 (56%), Gaps = 20/395 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LLR   VP+  G + ++   AE+  K L   + V K+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKELLRVAGVPIPPGEIATTPEQAEAIAKKLGTAVMV-KAQVHAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   + ++       ILG T+           V  V V   ADI  E Y+
Sbjct: 57  -------GGVKFCPTPEAAKEKATAILGMTI-------KDLTVEKVLVTVAADIASEAYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR +    F+ S  GG+DIEEVA   P+KI    +D   G+   +   +   L   
Sbjct: 103 GIIVDRATKKPVFMVSAAGGIDIEEVAATTPEKILYHPVDTRYGLLPFEAMRMGFFLYQD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY AF     S+ EINPL++     L  +D K+  DDN L R   I 
Sbjct: 163 VKLARQAAKIMQQLYTAFMSAGCSIAEINPLVVTPQNELIAVDGKMVIDDNELDRLPQIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD S E   E++A+  NL++I LDGN+GC+VNGAGLAMATMD++K YGG PANFLD+G
Sbjct: 223 ALRDESSEAPSEVDARNANLTFIKLDGNVGCVVNGAGLAMATMDLVKYYGGDPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++ +KV  A +IIT+D +VK IL NIFGGI R D +  GI++A K   + +P+V+RL 
Sbjct: 283 GSSNPEKVVNALRIITADPNVKCILFNIFGGITRTDDVANGIVTATKANPLKVPIVIRLT 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++  +++ E+G +   + D+D A Q+ V   
Sbjct: 343 GTNEELALQILKENGFS--ASSDMDSAVQRAVELA 375


>gi|15605556|ref|NP_220342.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76789566|ref|YP_328652.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           A/HAR-13]
 gi|255349225|ref|ZP_05381232.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 70]
 gi|255503762|ref|ZP_05382152.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 70s]
 gi|255507443|ref|ZP_05383082.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           D(s)2923]
 gi|21264031|sp|O84828|SUCC_CHLTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|123606558|sp|Q3KKL8|SUCC_CHLTA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|3329290|gb|AAC68418.1| Succinyl-CoA Synthetase, Beta [Chlamydia trachomatis D/UW-3/CX]
 gi|76168096|gb|AAX51104.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis A/HAR-13]
 gi|289525867|emb|CBJ15349.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis Sweden2]
 gi|296435452|gb|ADH17630.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis E/150]
 gi|296436376|gb|ADH18550.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis G/9768]
 gi|296437307|gb|ADH19477.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           G/11222]
 gi|296438235|gb|ADH20396.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           G/11074]
 gi|296439169|gb|ADH21322.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           E/11023]
 gi|297140736|gb|ADH97494.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis G/9301]
 gi|297748950|gb|ADI51496.1| Succinyl-CoA synthetase beta chain [Chlamydia trachomatis D-EC]
 gi|297749830|gb|ADI52508.1| Succinyl-CoA synthetase beta chain [Chlamydia trachomatis D-LC]
          Length = 386

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 158/396 (39%), Positives = 235/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      +N V +    +I  E YL
Sbjct: 58  -------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  +I  +G+       + + A+  V   +
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELAVQLSR 386


>gi|253565538|ref|ZP_04842993.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 3_2_5]
 gi|251945817|gb|EES86224.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 3_2_5]
          Length = 382

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/396 (39%), Positives = 231/396 (58%), Gaps = 18/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y +PV +  +  +   A +A   +      +K+Q+  GGRGK    
Sbjct: 1   MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V    + IL  T+        G  V  + + +  +I  E Y+
Sbjct: 58  -------GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILLSEAVNIAAEYYI 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  I S  GGMDIEEVA+  P+KI +  IDPLIGV           L  Q
Sbjct: 104 SFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LYKAF +KD SL EINPL++   G L  +D+K+ FDDNALYRH D+Q
Sbjct: 164 AEQANQMATIIQDLYKAFIEKDASLAEINPLVLTPVGTLLAIDAKMVFDDNALYRHPDLQ 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L + +E++  E  AK+   SY+ +DG IGCMVNGAGLAM TMD+IKLYGG PANFLD+G
Sbjct: 224 KLSEPTEDEKLEAIAKERGFSYVRMDGEIGCMVNGAGLAMTTMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A +++  D  VK + INIFGGI RCD +  G+L A ++++ +IP+++RL 
Sbjct: 284 GSSNPVKVIEAMRLLLDDKKVKVVFINIFGGITRCDDVAIGLLQAFEQIQTDIPIIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  L+ ++      A  +++A +  + ++K
Sbjct: 344 GTNGNMGRELLRKNN-RFQVAQTMEEATKMAIESLK 378


>gi|255311661|ref|ZP_05354231.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 6276]
 gi|255317962|ref|ZP_05359208.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis 6276s]
          Length = 386

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 158/396 (39%), Positives = 235/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  S + +++   ++L     + QT      +N V +    +I  E YL
Sbjct: 58  -------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLPLPINKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM+T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMSTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  +I  +G+       + + A+  V   +
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELAVQLSR 386


>gi|300932903|ref|ZP_07148159.1| succinyl-CoA synthetase subunit beta [Corynebacterium resistens DSM
           45100]
          Length = 401

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 143/405 (35%), Positives = 225/405 (55%), Gaps = 28/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ +   + VPV +  V ++   A+ A   L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDIFEAHGVPVLRAKVATTPEQAKEAATELGTPVVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       +ILG  +        G  V  V + +GADI  E Y 
Sbjct: 58  -------GGVKLAKSPEEAAQHAEQILGMDI-------KGHTVRKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT      + S +GG++IE++A + P+ + +     L G+T E    + +   + 
Sbjct: 104 SILLDRTRRRYLAMFSKEGGVEIEKLAVEKPEALVRRNFTALEGLTEEIAREIAEQGGMT 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   LYK + ++D SL+E+NPL+   +GR+  LD K+S DDNA +RH +  
Sbjct: 164 GEDIDKIVPVMQTLYKVYSEEDASLVEVNPLVKTGDGRIIALDGKVSLDDNAEFRHPEHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA------PA 294
           +L D S  D  E++AK+ +L+Y+ LDGN+G + NGAGL M+T+D++   G        PA
Sbjct: 224 KLADPSSSDPLELKAKELDLNYVKLDGNVGVIGNGAGLVMSTLDVVAYAGEEFDSKPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK----EVK 350
           NFLD+GGGA  + +A    +I  D  VK + +N+FGGI  CD +  GI++A K    +  
Sbjct: 284 NFLDIGGGASAEVMANGLGVILGDEQVKSVFVNVFGGITACDEVANGIVNAFKILADQGV 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHA 394
              PLV+RL+G N D+G R++ E+ L  V     +DDAA++    
Sbjct: 344 EPKPLVVRLDGNNADLGRRILEEANLPRVEMVGSMDDAARRAAEI 388


>gi|262341346|ref|YP_003284201.1| succinyl-CoA ligase (ADP-forming) subunit beta [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272683|gb|ACY40591.1| succinyl-CoA ligase (ADP-forming) subunit beta [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 399

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 158/407 (38%), Positives = 231/407 (56%), Gaps = 21/407 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ + +L  +++ V  G++ SS   +  A K +         V+K+QIHAGGRGK
Sbjct: 1   MNLHEYQGREILNSFSIQVPYGILASSPEESVEAAKIIFKRTGKKSLVIKAQIHAGGRGK 60

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GG+++  +L  V    + ILG  LIT QT   G  V  + + +      
Sbjct: 61  A----------GGIQIAKTLDEVYEKSKNILGKFLITPQTSKKGKLVRKILLSEDIYSNE 110

Query: 117 -----ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YLS+L++R       + S +GG++IE ++K  P KI+   IDP++G+      
Sbjct: 111 LNSPIEYYLSILLNRDIEKDIILYSKEGGVEIENLSKKNPNKIYTEEIDPILGLQLFQTR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L +      +      +LYKA+   D  LLEINPLI   + ++  +D KI  DDN
Sbjct: 171 KIAFNLGMDSDTLKNFSSFLISLYKAYKAYDALLLEINPLIKTFDNKIIPVDIKIVLDDN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH       D  + D  E EA + +L+++ L+GN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKKYAINNDSKDIDFLEKEANEAHLNFLKLEGNVGCMVNGAGLAMATMDMIKFCGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK--EV 349
            PANFLD+GG AD+ +V  AF +I  D SVK ILINIFGGI+RCD + +GI+++    + 
Sbjct: 291 EPANFLDIGGSADKKRVEKAFSLILRDKSVKTILINIFGGIVRCDTVSEGIINSYSKIDH 350

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            I IP+V+RL+G N  I  +++  S L + +   L DAA KI   ++
Sbjct: 351 DIQIPVVVRLQGTNERIAKKMLQNSLLPIYSTDTLKDAADKIKEILQ 397


>gi|298244136|ref|ZP_06967942.1| succinyl-CoA synthetase, beta subunit [Ktedonobacter racemifer DSM
           44963]
 gi|297551617|gb|EFH85482.1| succinyl-CoA synthetase, beta subunit [Ktedonobacter racemifer DSM
           44963]
          Length = 380

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 149/395 (37%), Positives = 221/395 (55%), Gaps = 20/395 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK +L +Y +PV  G V  +   AE+  + L GP+ V+K+Q++ GGRGK    
Sbjct: 1   MKIHEYQAKEVLARYGIPVQPGKVAHTPEEAETIARELDGPV-VIKAQVYVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + +   +    +LG  +        G  V+ V V    DI  E YL
Sbjct: 57  -------GGIQFGDTPEEARASAARVLGMNI-------KGLTVDKVLVTSKIDIKEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ DR S     + S +GG+DIEEVA  +P+KI K  ID   G+   +  ++     L 
Sbjct: 103 GIVHDRKSQTPVVMVSKEGGIDIEEVAATHPEKIIKYPIDMHWGLRPFEALNIVTEAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A      +  NL KA+   D  L EINPL +  +G++   D+KI  DDNALYR  +I 
Sbjct: 163 TKALRPAAAILANLAKAYIGSDAQLAEINPLALTADGKVMAADAKILIDDNALYRQKEIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              +  + +  E EAKQ  L+Y+ LDG++G + NGAGL M T+D++   GG PANFLD+G
Sbjct: 223 SWSEPEDANPIEFEAKQAGLTYVKLDGDVGIIGNGAGLVMTTLDMVARSGGKPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  A   +  D  VKGIL+NIFGGI R + + +G++ A  E+   +P+V+RL 
Sbjct: 283 GGAKAEVMYKALTFVARDPQVKGILVNIFGGITRGEEVARGVIMAQGELPKGMPIVVRLS 342

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G   + G  L+ ++GL+     D+ D+AQKIV A+
Sbjct: 343 GTGAEEGRALLKDAGLD--WGQDMRDSAQKIVAAI 375


>gi|156848382|ref|XP_001647073.1| hypothetical protein Kpol_1050p74 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117756|gb|EDO19215.1| hypothetical protein Kpol_1050p74 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 434

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/414 (39%), Positives = 237/414 (57%), Gaps = 22/414 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESA----IKTLPGP-LYVVKSQIHAGGRG 55
           ++I+E+++  LL +Y V    G V  +   A          L      VVK+Q   GGRG
Sbjct: 20  LSINEFRSAQLLNEYGVNTPAGAVAWTPQQASQVSASLFDKLGRDAQLVVKAQALTGGRG 79

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           KG F         G+++  S +       ++LG  LITKQ+G  G  VN VY+ +   +L
Sbjct: 80  KGHFDN---GFPTGIQMVDSQQQATETASQMLGHRLITKQSGEKGKLVNAVYIVERKKVL 136

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           RE YLS+L+DR       I   +GGM+IEEVA+  P+KI K  IDP  GVT E    +  
Sbjct: 137 REAYLSILMDRAERKPLIIVCEEGGMNIEEVAERSPEKIKKFHIDPSKGVTDEIATGVAK 196

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR----LRVLDSKISFDDN 231
            L    +   D  D    LYK + + D + +EINPL  ++       +  +D+K  FDDN
Sbjct: 197 GLGFSQEVLEDAKDQVKRLYKIYDNTDATQIEINPLSEVETAESKHGVMCMDAKFGFDDN 256

Query: 232 ALYRHLDIQELR---DVSEEDSREIEAK-QHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           A YR   I   R   + S E+    EAK  ++L+++ L+GNIGC+VNGAGLAMATMD+I+
Sbjct: 257 ASYRQERIYSWRNDVEESPEEKFSTEAKRDYDLNFVKLNGNIGCLVNGAGLAMATMDVIQ 316

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKII-----TSDSSVKGILINIFGGIMRCDVLVKGI 342
           LYGG PANFLD GGGA    +  AF++I     TS + +  I +NIFGGI+RCD + +GI
Sbjct: 317 LYGGKPANFLDCGGGATPQTIKKAFELIVDSSKTSATPLDAIFVNIFGGIVRCDFVAQGI 376

Query: 343 LSAVKEVKIN-IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           + A+K++ +  +P+V+RL+G N+D G  ++  SG+N++   +LD AA+K+V   
Sbjct: 377 VDAIKDLNLKDLPIVVRLQGTNLDEGREIVKSSGVNILAFDELDPAAEKVVEVA 430


>gi|333029754|ref|ZP_08457815.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Bacteroides
           coprosuis DSM 18011]
 gi|332740351|gb|EGJ70833.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Bacteroides
           coprosuis DSM 18011]
          Length = 377

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 147/395 (37%), Positives = 225/395 (56%), Gaps = 19/395 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EYQAK++ + Y +P  K  +  S        K+      V+K+Q+  GGRGK    
Sbjct: 1   MKLYEYQAKSVFQAYGIPTEKHYLCFSPQDVVEVFKSNHLDKAVLKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++      +EI G  +           V+ + V +  +I +E Y+
Sbjct: 58  -------GGVKLVKSIEEAELRAKEIFGMQIKN-------LSVHQLLVSEAIEIKKEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DRT+  +  I S  GGMDIE+VAK+ P+K+ K  IDP  G+           L   
Sbjct: 104 SITLDRTTKSMVLILSASGGMDIEQVAKETPEKVLKFPIDPFHGIFDFQAKEYAYYLSSD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY  F +KD SL EINPL++  +G++  +D K+  D+NA YR  +I 
Sbjct: 164 IKEVNQIASILKKLYHLFVEKDASLAEINPLVLCGDGKVLAIDGKMDIDNNAKYRQPEIV 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +   S  +  E +AK+   SY+ LDG+IGCMVNGAGLAM TMD+I+LYGG PANFLD+G
Sbjct: 224 SMYKPSGSEIIEEKAKEKGFSYVQLDGDIGCMVNGAGLAMTTMDMIQLYGGKPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A +I+ SD +VK +LINIFGGI RCD + +G+  A K +K++IP+++RL 
Sbjct: 284 GSSNPQKVIDAMEILVSDPNVKSVLINIFGGITRCDDVARGLQEAFKTIKVDIPVIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N ++G  ++ ++   +  A  +D+A +  V A 
Sbjct: 344 GTNEELGRAMLKDT--PLTVAQTMDEATELAVKAS 376


>gi|288931610|ref|YP_003435670.1| succinyl-CoA synthetase subunit beta [Ferroglobus placidus DSM
           10642]
 gi|288893858|gb|ADC65395.1| succinyl-CoA synthetase, beta subunit [Ferroglobus placidus DSM
           10642]
          Length = 381

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 152/400 (38%), Positives = 233/400 (58%), Gaps = 23/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  KY + + KG + ++V       + L G + V+KSQI  GGRGK    
Sbjct: 1   MRLHEYQAKQIFAKYGIKIPKGKLATTVEEVRKIAEELGGKV-VLKSQILVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S++  +   +++ G  +        G RV  +YVE+  +I RE+Y+
Sbjct: 57  -------GGIKLANSVEEAVEIAKDLFGKVI-------KGHRVEKIYVEEQLNIQREMYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR    +A I S+ GGMDIEE+A  +P+KI ++ I+PL G+    +  +     + 
Sbjct: 103 GLTLDRAEKGIALIVSSVGGMDIEEIAAKHPEKIARITINPLYGLWDFQIREVLYKSGMP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +   LYK   D +  L EINPL++   G L   D++++ DDNALYRH +++
Sbjct: 163 KELHKEITGIIKALYKILIDHEAELTEINPLVLTDKG-LFAADARLNVDDNALYRHPELK 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD +E D  E  A++  L+Y+ LDGNIG + NGAG++M+TMD+I L GG PANFLD+G
Sbjct: 222 ELRDYTEVDQIERIAEEKGLNYVKLDGNIGVIANGAGMSMSTMDLIYLEGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A K I  D +VK I +NIFGGI RCD + KG++ A +E+ I +P+V+RL 
Sbjct: 282 GGASSEVVKEAIKTILMDKNVKVIFMNIFGGITRCDEVAKGLVKAFQEIVIPVPIVLRLA 341

Query: 361 GAN----VDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N      I    +     N+I    +++ A+K V   +
Sbjct: 342 GTNEEEGRRIIEEFLEREKKNIIVVETMEEGAKKAVELAR 381


>gi|53713546|ref|YP_099538.1| succinyl-CoA synthetase subunit beta [Bacteroides fragilis YCH46]
 gi|60681831|ref|YP_211975.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis NCTC 9343]
 gi|255009309|ref|ZP_05281435.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis 3_1_12]
 gi|265763871|ref|ZP_06092439.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_16]
 gi|313147062|ref|ZP_07809255.1| succinyl-CoA synthetase subunit beta [Bacteroides fragilis 3_1_12]
 gi|81315104|sp|Q5LCW4|SUCC_BACFN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|81382505|sp|Q64U25|SUCC_BACFR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|52216411|dbj|BAD49004.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis YCH46]
 gi|60493265|emb|CAH08049.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis NCTC 9343]
 gi|263256479|gb|EEZ27825.1| succinyl-CoA synthetase subunit beta [Bacteroides sp. 2_1_16]
 gi|301163323|emb|CBW22873.1| succinyl-CoA synthetase beta chain [Bacteroides fragilis 638R]
 gi|313135829|gb|EFR53189.1| succinyl-CoA synthetase subunit beta [Bacteroides fragilis 3_1_12]
          Length = 382

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/396 (39%), Positives = 231/396 (58%), Gaps = 18/396 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +   Y +PV +  +  +   A +A   +      +K+Q+  GGRGK    
Sbjct: 1   MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++ + V    + IL  T+        G  V  + + +  +I  E Y+
Sbjct: 58  -------GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILLSEAVNIAAEYYI 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DR +  V  I S  GGMDIEEVA+  P+KI +  IDPLIGV           L  Q
Sbjct: 104 SFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQ 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  +LYKAF +KD SL EINPL++   G L  +D+K+ FDDNALYRH D+Q
Sbjct: 164 AEQANRMATIIQDLYKAFIEKDASLAEINPLVLTPVGTLLAIDAKMVFDDNALYRHPDLQ 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L + +E++  E  AK+   SY+ +DG IGCMVNGAGLAM TMD+IKLYGG PANFLD+G
Sbjct: 224 KLSEPTEDEKLEAIAKERGFSYVRMDGEIGCMVNGAGLAMTTMDMIKLYGGNPANFLDIG 283

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G ++  KV  A +++  D  VK + INIFGGI RCD +  G+L A ++++ +IP+++RL 
Sbjct: 284 GSSNPVKVIEAMRLLLDDKKVKVVFINIFGGITRCDDVAIGLLQAFEQIQTDIPIIVRLT 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G  L+ ++      A  +++A +  + ++K
Sbjct: 344 GTNGNMGRELLRKNN-RFQVAQTMEEATKMAIESLK 378


>gi|282891425|ref|ZP_06299924.1| hypothetical protein pah_c161o043 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498710|gb|EFB41030.1| hypothetical protein pah_c161o043 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 387

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/384 (45%), Positives = 238/384 (61%), Gaps = 10/384 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHE+QAK +L+KY VP++   VIS +      +  L     V+K Q+HAGGRGK    
Sbjct: 1   MNIHEFQAKNILKKYGVPISDYAVISKLEQLPHVLDQLKLDEAVLKIQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S + +    + +LG  L+  QTGP G   + + +    D+ +E YL
Sbjct: 58  -------GGVKIARSREEIRETAKTLLGMKLVNNQTGPEGVVAHQIIISPLVDVKKEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR       IAS +GGMDIEEVA+ +P KI  + I     +       +   +  +
Sbjct: 111 GAIIDRKKAQAVLIASPEGGMDIEEVAEKFPDKIMTVPISFNGDLKPFQQLKISQFMGWK 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L  N+ KAF + D SLLEINPL++  +  L  LD+K+S D+NALYR  +I 
Sbjct: 171 GDIAKQGMRLAKNIAKAFIETDASLLEINPLVLNAHDELIALDAKLSVDENALYRQPEIA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S+  + E  AK+++L+Y+ALDG IGCMVNGAGLAMATMDII  YGGAPANFLDVG
Sbjct: 231 SYYDPSQIPANEAAAKEYDLAYVALDGEIGCMVNGAGLAMATMDIIHHYGGAPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA Q+KVA  FKII +D  VK IL+NIFGGIM C  L  GI+SA  E+ + +PL++R+E
Sbjct: 291 GGATQEKVAEGFKIILADPKVKAILVNIFGGIMNCVTLAAGIISAAGELNVTVPLIIRME 350

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G NV+ G +++ +SG+N++ A  L
Sbjct: 351 GTNVEKGKKMLQDSGVNIVIADSL 374


>gi|316972114|gb|EFV55805.1| succinyl-CoA synthetase, beta subunit [Trichinella spiralis]
          Length = 435

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/395 (38%), Positives = 227/395 (57%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+Q   LL++ ++P  +  VI++V  A  A+  L G  +V+K+ +  GGRG G F 
Sbjct: 25  LSVMEHQGLKLLKELDIPCPEHEVITNVDQATEAMARLGGSDFVLKALVPTGGRGLGVFD 84

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV+   S +  +    +++G  L TKQTG  G     + +     + RE Y 
Sbjct: 85  N---GLKGGVQTICSEEEAVDIASKMIGHHLKTKQTGDKGLLCEKLLLAKRHFLRREYYF 141

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       I   QGGM IE++A + P  I  L +D + G+       +   +   
Sbjct: 142 SITLDRMHNGPVLIGCGQGGMSIEKIAAEDPDAIVYLPVDVVDGIDENKAREMISKMGFT 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    ++F  LY  F   D +L+EINP+    +G L+ +D K+  DD A YR  ++ 
Sbjct: 202 SHCQDQALEIFKKLYSMFMKYDCNLVEINPMAEDSSGNLQCMDCKVVVDDAAAYRQKELF 261

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +      +  E EA + NL+YI L+G+I C+VNGAGLAMATMDIIKL+GG PANFLD+G
Sbjct: 262 AMVGQRATNELEQEAAEFNLNYIPLEGDIACLVNGAGLAMATMDIIKLHGGEPANFLDIG 321

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D+V+AAF+II+ DS V+ IL+NIFGGI+RCDV+  G+  A K++ + +P+V RL+
Sbjct: 322 GGASIDQVSAAFRIISKDSKVRAILVNIFGGILRCDVIATGVCRAAKDLNLTVPIVCRLQ 381

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G  VD    +I  + L V+   +LDDAA+  V   
Sbjct: 382 GTKVDDAKAVITANQLKVLAVDNLDDAAKMSVKLA 416


>gi|312096708|ref|XP_003148752.1| succinate-CoA ligase [Loa loa]
 gi|307756083|gb|EFO15317.1| succinate-CoA ligase [Loa loa]
          Length = 382

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/362 (42%), Positives = 230/362 (63%), Gaps = 4/362 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+Q  +LL++ ++PVA   V  S     +  + + G   VVK+Q+  GGRGKG F+
Sbjct: 24  LSLKEHQGISLLKQADIPVAPFGVSRSADELYNEARKIGGKDLVVKAQVLTGGRGKGYFE 83

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  +GGV++  S +        +LGS + TKQTG +G   + V +       RE Y 
Sbjct: 84  ---SGLEGGVQLVFSPEEAREKASMMLGSKIFTKQTGASGKLCDEVMICKRLFTRREFYF 140

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +G    I S++GG++IEEVA   P+ I K  ID   G+   + +S+ D +  +
Sbjct: 141 SITMDRHTGGPVAIGSSKGGVNIEEVAAKDPKAIVKCPIDIFDGMKDAEASSIADRMGFK 200

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +I   ++F  LY  F   D +L+EINP+    NG+L  LD K++ D NA YR  ++ 
Sbjct: 201 DDLKIQAANIFKKLYNLFIKYDATLIEINPMAEDINGKLYCLDCKLNIDSNASYRQAELF 260

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D  ++D  E  A + +L+YI LDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 261 AMEDKQQQDPLESRAAKADLNYIRLDGNIGCMVNGAGLAMATMDIIKLHGGDPANFLDVG 320

Query: 301 GGADQDKVAAAFKIITSD-SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGA  ++VA AF+IIT+D   V  IL+NIFGGIMRCDV+ +G+++A+ E+++ +P+V+RL
Sbjct: 321 GGATAEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIAQGMITAISELQLKVPVVVRL 380

Query: 360 EG 361
           +G
Sbjct: 381 QG 382


>gi|108804115|ref|YP_644052.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rubrobacter
           xylanophilus DSM 9941]
 gi|123177407|sp|Q1AWI8|SUCC_RUBXD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|108765358|gb|ABG04240.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rubrobacter
           xylanophilus DSM 9941]
          Length = 383

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 161/397 (40%), Positives = 240/397 (60%), Gaps = 19/397 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+Q K LL ++ +    GVV ++   A  A + L G + V K+Q+  GGRGK    
Sbjct: 1   MDLYEHQGKELLGRFGLRTLPGVVATTPEEARRAAERLGGTVAV-KAQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  S +      R ILG  +        G  V  + +E GADI RELYL
Sbjct: 57  -------GGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLIESGADIERELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR S     + ST+GG+DIEEVA+  P  I +L +DPL+G+    V  L     L 
Sbjct: 103 SAMVDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGLLPYQVRELTFASGLS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+   D G    NLY+AF   D SL+EINPL++   G +  LD+K++ D+++LYRH +I 
Sbjct: 163 GETAKDFGRAVQNLYEAFRGIDASLVEINPLVVTGEGEVVALDAKVTVDNSSLYRHQEIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RDV   D +E  A++  L Y+ LDG++G + NGAGL M+T+D++   GG PANF DVG
Sbjct: 223 GWRDVEAADPQEHRAQEVGLQYVKLDGDVGILGNGAGLVMSTLDVVAQAGGRPANFCDVG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +K+A A +I+ S+ +V+ +  NIFGGI R D + +G+L+A+++  I++P+V+RL+
Sbjct: 283 GGADAEKIATALEIVASNENVRSVFFNIFGGITRGDEVARGLLAAIRKTGIDLPVVVRLD 342

Query: 361 GANVDIGNRLIAE-SGLNVITAIDLDDAAQKIVHAVK 396
           G N + G RL+AE +  NV T   + DAA++ V   +
Sbjct: 343 GTNAEEGLRLLAEGAPENVHTEETMLDAARRAVELAR 379


>gi|89890669|ref|ZP_01202178.1| succinyl-CoA synthetase beta chain [Flavobacteria bacterium BBFL7]
 gi|89516814|gb|EAS19472.1| succinyl-CoA synthetase beta chain [Flavobacteria bacterium BBFL7]
          Length = 397

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 172/408 (42%), Positives = 243/408 (59%), Gaps = 22/408 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HEYQ K +L  Y V + +G V ++   A +A K L        +V+K+Q+HA     
Sbjct: 1   MNLHEYQGKEILASYGVTIQRGKVATTAAEAVAAAKELTEETGTGWHVIKAQVHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-- 114
                      GGV++  +L+ V     +I+G  L+T QT   G RV+ V V +      
Sbjct: 56  -----GGRGKGGGVKLAKNLEQVEEIAGQIIGMDLVTPQTSAEGKRVHQVLVAEDVYEPG 110

Query: 115 ---LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              + E Y+S+L+DR  G    + ST+GGMDIE VA++ P  IF   ID   G+      
Sbjct: 111 EVEVEEFYMSVLLDRAQGKNMIMYSTEGGMDIETVAEETPHLIFTETIDASHGLQGFQAR 170

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            +   L L G+A  +       LY A+   D +L EINP++   + R+  +D KI+ D+N
Sbjct: 171 RIAFNLGLSGKAFKEMTKFVAALYNAYVGSDSALFEINPVLKASDNRIIAVDCKITLDEN 230

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL+RH D+  +RD  EE++ E+EAK   L+Y+ LDGN+GCMVNGAGLAMATMD+IK  GG
Sbjct: 231 ALFRHKDLAAMRDTREENATEVEAKAVGLNYVDLDGNVGCMVNGAGLAMATMDLIKQAGG 290

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLDVGG AD  +V  AF+II  D  V+ IL+NIFGGI+RCD + +GI+ A K +  
Sbjct: 291 EPANFLDVGGTADAKRVEEAFRIILKDDKVEAILVNIFGGIVRCDRVAQGIVDAYKNMGD 350

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            IN+P+++RL+G N +I   LI  SGL+V +A++  +AA K V AV G
Sbjct: 351 AINVPIIVRLQGTNAEIAKELIDNSGLDVQSAVEFQEAADK-VQAVIG 397


>gi|237805174|ref|YP_002889328.1| succinyl-CoA synthetase subunit beta [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231273474|emb|CAX10390.1| succinyl-CoA synthetase beta chain [Chlamydia trachomatis
           B/TZ1A828/OT]
          Length = 386

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y +P+    V +SV   E+AI+       VVK+Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQAEQWKAGVVKAQVHAGGRGKN--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  SL+ +++   ++L     + QT      V+ V +    +I  E YL
Sbjct: 58  -------GGVVIAHSLEDLLAAADKLLHMQFSSNQTAGLSLPVDKVLISPLVEIASEYYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GG+DIEEVA+  P ++ K+ +     +    +  +   +E  
Sbjct: 111 AIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  +   L + F +KD SLLEINPL++ K+G L +LD+K++ DDNALYRH  + 
Sbjct: 171 QPIADQGNRIIRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYRHPQLA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D S+E+ R++ AKQ  LSYIALDG IGC+VNGAGLAM T+DI+KLYGG+ ANFLDVG
Sbjct: 231 DCYDPSQENIRDVLAKQLGLSYIALDGTIGCLVNGAGLAMGTLDILKLYGGSAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A + ++  A  ++ SD SV+ + I+IFGGIM C V+  G++SA++  K  IP V+RLE
Sbjct: 291 GSASEKQIQEAISLVLSDKSVRVLFIHIFGGIMDCAVVASGLVSAMQGQKETIPTVIRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD G  +I  +G+       + + A+  V   +
Sbjct: 351 GTNVDKGKDMIINAGIPCEFVTSMSEGAELTVQLSR 386


>gi|313679917|ref|YP_004057656.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oceanithermus
           profundus DSM 14977]
 gi|313152632|gb|ADR36483.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oceanithermus
           profundus DSM 14977]
          Length = 377

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 154/397 (38%), Positives = 217/397 (54%), Gaps = 22/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK LL +Y VPV  G V      AE   K       V+K+Q+H GGRGK    
Sbjct: 1   MKLHEFQAKELLAQYGVPVPPGKVAYGPEEAERIAKDFG-KQVVIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +       +ILG  +        G  V  V V +  DI RE Y 
Sbjct: 57  -------GGVKLAQ-PEEAREVAGKILGMDI-------KGLTVKKVLVAEAVDIAREYYA 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR+S     + S +GG+DIEEVA+  P+ I K  IDP  G+   +   +     L+
Sbjct: 102 GLIIDRSSQRAVLMVSKEGGVDIEEVARTNPEAIVKYPIDPHKGLRHFEAREVVKQAGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       ++   LY AF   D SL EINPL++ + G +   D+KI  DDNAL+RH D+ 
Sbjct: 162 GNL-NRLANVIVQLYNAFKGVDASLAEINPLVVTEQGEIIAADAKIDLDDNALFRHPDLA 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LR+V  E   EIEA  +  +Y+ LDG++G + NGAGL M T+D++   GG PANFLD+G
Sbjct: 221 KLREVEAEHPLEIEASNYGFAYVKLDGDVGVIGNGAGLVMYTLDLVNRAGGKPANFLDIG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A K++  D  VKGI INIFGGI R D + KG++ A++E  + +P+VMR+ 
Sbjct: 281 GGAKAEVVYNAVKLVAKDPDVKGIFINIFGGITRADEVAKGVIQALEEGLVKVPVVMRVA 340

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+   G  +    +  +AA  IV  V G
Sbjct: 341 GTAEEEAKKLLE--GKPIYLYPNSLEAAGAIVTMVGG 375


>gi|254994743|ref|ZP_05276933.1| succinyl-CoA synthetase subunit beta [Anaplasma marginale str.
           Mississippi]
          Length = 386

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 196/395 (49%), Positives = 259/395 (65%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  + V V +GVV+ SV   +  +  L   L  VK+QIHAGGRGK    
Sbjct: 1   MNVHEFQAKGVLSSFGVTVPRGVVVESVEEVDRLLGDLAPGLVAVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +   V S +R++L S L+T QT P G  VN VY+E+G DI +E Y+
Sbjct: 58  -------GGVKIGKTKDEVKSLVRQMLHSVLVTHQTSPEGQ-VNKVYLEEGVDIGKEYYI 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S +VDR+ G V+ I S++GG+DI  VAK+ P  +  + +DPL G  S     LC    L 
Sbjct: 110 SAVVDRSVGRVSIIFSSEGGVDIA-VAKERPNMVSVVHVDPLYGFRSFHGQELCRRFGLG 168

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +YK   + D S +EINP+    +G    LD+KI+FDDN LYR+ +I 
Sbjct: 169 PKQVSGVVSMARKIYKVLVETDASQVEINPMAETSSGEFLALDAKIAFDDNGLYRNPEIA 228

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D  E  + E+EA +H LSYI +DGNIGCMVNGAGLAMATMDIIK YGG PANFLDVG
Sbjct: 229 KLQDPDEYAAEELEAAKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 288

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+Q+ V  AFKII   S VKGIL+NIFGGIMRCDV+ KGI+ + KE+ +N+PLV+RL 
Sbjct: 289 GGANQEAVREAFKIILQ-SGVKGILVNIFGGIMRCDVIAKGIIESTKEIGVNVPLVVRLS 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N +IG +L+ +SGL +  A DLD+AA  IV  V
Sbjct: 348 GTNFEIGRKLLDDSGLGITAAADLDEAASFIVKMV 382


>gi|85860260|ref|YP_462462.1| succinyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB]
 gi|85723351|gb|ABC78294.1| succinyl-CoA synthetase beta chain [Syntrophus aciditrophicus SB]
          Length = 398

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 158/395 (40%), Positives = 236/395 (59%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M I+EYQ K   R + +P  +G    +     +A ++L     V+KSQI          K
Sbjct: 10  MKIYEYQVKEFFRSFGIPTPRGAAGKTSDEIVTAARSLGVMPVVLKSQI----------K 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++L+       ++LGS L+T QTGP G +VN + +E+  D  RELY+
Sbjct: 60  AGGRGKAGGIRTANTLEEAGLQAIDLLGSRLVTAQTGPAGEQVNSLLLEERIDHERELYV 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +LVDR +G  A + S +GG+DIE++ ++ P +I    IDP  G+ S   + +   L L 
Sbjct: 120 GILVDRETGRPALLVSGEGGVDIEKLGREAPGQILCESIDPAYGLRSFQASRVFLSLGLP 179

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     +L  +LY+ F + D S +EINPL +  +G    LD K++ DDNALYRH  + 
Sbjct: 180 SASAARCAELSLSLYRLFMEMDCSDVEINPLALTTSGEPVALDGKVNVDDNALYRHPPLA 239

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L +  EE++ E  A    L+YI L+G++GCMVNGAGLAMATMD+IK+ G  PANFLDVG
Sbjct: 240 SLHEKEEENALEAAASALGLNYIKLNGSVGCMVNGAGLAMATMDLIKMTGAEPANFLDVG 299

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA   ++    +I+ +D +VK + +NIFGGI+RCD + +GI   V+++ I++P+V+RLE
Sbjct: 300 GGASVSRIREGLRIVLADRNVKILFVNIFGGILRCDTVAEGIAQGVRDLSISVPVVIRLE 359

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N D G ++++ SGLN I   DL +A  +I   V
Sbjct: 360 GTNRDEGLKILSSSGLNFIQVTDLREAVLRIGEEV 394


>gi|320101247|ref|YP_004176839.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Desulfurococcus
           mucosus DSM 2162]
 gi|319753599|gb|ADV65357.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfurococcus
           mucosus DSM 2162]
          Length = 379

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 153/400 (38%), Positives = 230/400 (57%), Gaps = 24/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K + R+Y V V +G++ SSV     A + L   + V+K+Q+  GGRG     
Sbjct: 1   MKLYEYEGKEIARRYGVDVPRGLLASSVEEVAEAYRRLGSQVVVLKAQVLVGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   SL+  ++   E+  +++        G RV  + VE+   I RELY+
Sbjct: 58  -------GGVKKAGSLEEAVAKAGELFSTSI-------RGERVGKLLVEEAVCISRELYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL VDR S  + ++ S  GG++IEE+A+ +P K+ ++ +DP  G +S         L L 
Sbjct: 104 SLTVDRASRRLVYLVSGMGGVEIEELARRHPDKVLRIPVDPFNGFSSYMARQALGFLGLP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   +Y+   D D  L+E NPL    +G L  LD+K+  DDN+LYRH D+Q
Sbjct: 164 WDKLGVLENVMRAMYRIMVDYDAELVEFNPLAYTCSGGLTALDAKVIVDDNSLYRHPDLQ 223

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            L  RD S  +     AKQ   +Y+ LDG+IG + NGAGL MATMD I  YGG PANFLD
Sbjct: 224 PLYGRDASSYER---LAKQLEFNYVELDGDIGVISNGAGLTMATMDAILHYGGRPANFLD 280

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA +++V  A KI+ +   VK +L+NIFGGI RCD +  G++ A+KE  +  P+V+R
Sbjct: 281 IGGGATRERVREAAKIVLTHPRVKAVLVNIFGGITRCDEVAAGVVEALKEAGVAKPVVVR 340

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           + G N + G R++ E G+N  T  ++D+A  K+V   + V
Sbjct: 341 MLGTNEEEGRRILREHGINAYT--EMDEAVLKVVQLAREV 378


>gi|297566584|ref|YP_003685556.1| succinyl-CoA synthetase subunit beta [Meiothermus silvanus DSM
           9946]
 gi|296851033|gb|ADH64048.1| succinyl-CoA synthetase, beta subunit [Meiothermus silvanus DSM
           9946]
          Length = 387

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 149/397 (37%), Positives = 206/397 (51%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +Y +PV  G V  +   A+         + V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKELLARYGIPVPPGKVAYTADEAKQIATEYGNTV-VIKAQVHTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G     V V    DI +E Y 
Sbjct: 57  -------GGVKLAKTPEEAREKASQILGLNI-------KGFVTRKVLVAKAVDIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  + S +GG+DIEEVA   P  I K  IDP  G+   +   L     ++
Sbjct: 103 GLILDRVTQRVVLMLSKEGGVDIEEVAATKPYAIIKHPIDPHKGLRPFEARELIKKAGME 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY A+   D S+ EINPL+I   G +   D+KI  DDNALYRH D+ 
Sbjct: 163 GNL-NKLASVLVQLYNAYVGIDASIAEINPLVITPAGDVVAADAKIVLDDNALYRHPDLS 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LR+V  E   E+EA  +  SY+ LDG IG + NGAGL M T+D++   GG  ANFLD+G
Sbjct: 222 TLREVDAEHPLEVEASNYGFSYVKLDGWIGVIGNGAGLVMYTLDLVNRVGGKAANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A+ E  +  P+ MR+ 
Sbjct: 282 GGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRAMDEGILTKPVAMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +    L+   G  +       +AA+ IV    G
Sbjct: 342 GTAEEEAKALLK--GRPIYMYPTSIEAAKAIVSMTGG 376


>gi|149928247|ref|ZP_01916491.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
 gi|149823053|gb|EDM82294.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
          Length = 329

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 168/328 (51%), Positives = 236/328 (71%)

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           ++V  S+  V +   +ILG  LIT QTGP G +V+ + VE+GADI +E Y+ ++VDR + 
Sbjct: 1   MKVAKSMDDVKTYASQILGMQLITHQTGPEGQKVSRLLVEEGADIKKEYYVGMVVDRVTQ 60

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            V  +AS++GGM+IEEVA+  P+ I K+ +DP+ G+T  +   L   + +   +      
Sbjct: 61  RVCVMASSEGGMEIEEVAEHTPELIHKVYVDPVAGLTDSEADDLAVKIGIPAGSVAKARV 120

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
            F  LYKAF + D SL EINPLI+  +G +  LD+K++FD NAL+RH +I  LRD++EED
Sbjct: 121 AFQGLYKAFWETDASLAEINPLILTGSGDIIALDAKLNFDSNALHRHPEIVALRDLAEED 180

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
             EIEA + +LSYI+LDGNIGC+VNGAGLAMATMD IKL+GG PANFLDVGGGA  +KV 
Sbjct: 181 PAEIEASKFDLSYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVT 240

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFKI+  + ++K IL+NIFGGIMRCDV+  G+++A K V +++PLV+R++G N D+G +
Sbjct: 241 EAFKIMLKNPNLKAILVNIFGGIMRCDVIADGVVAASKAVGLSVPLVVRMKGTNEDLGKK 300

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAVKG 397
           ++AESGL +I A  + +AAQK+V A KG
Sbjct: 301 ILAESGLPIIAANTMGEAAQKVVAATKG 328


>gi|18313254|ref|NP_559921.1| succinyl-CoA synthetase subunit beta [Pyrobaculum aerophilum str.
           IM2]
 gi|21264039|sp|Q8ZVF3|SUCC_PYRAE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|18160774|gb|AAL64103.1| succinyl-CoA synthetase beta subunit (sucC) [Pyrobaculum aerophilum
           str. IM2]
          Length = 382

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/401 (34%), Positives = 217/401 (54%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  KY V +  G V  +        + +  P+ V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFSKYGVKIPPGKVALTPEEVLKIAREIGAPV-VLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V +S +      + + G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKVANSPEEAYELSKRMFGMNI-------KGLIVKKLYVTKFVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR S    F+AS  GGMDIEE+AK  P+KI ++ +DP  G+    V S+   L  +
Sbjct: 103 SLIIDRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYVDPATGLRDYHVRSIVSWLGFK 162

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                      +   +Y+   D D  L+E NPL + K G +  LD+++  DDNAL++H +
Sbjct: 163 QGTSQWQQAASIVQAMYRIMVDYDAELVESNPLAVTKEGEVIPLDARVIVDDNALFKHPE 222

Query: 239 IQE--LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++    D  +    E  AK+    Y+ LDG++G + NGAGL MATMD++  +GG PANF
Sbjct: 223 LEKALEEDPRDVTEFEAYAKKIGFHYVELDGDVGIIGNGAGLTMATMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE-VKINIPL 355
           LD+GGGA ++ V  A K++     VK I +NIFGGI R D +  GI  A+ E    N  +
Sbjct: 283 LDIGGGASREVVKEAVKVLLHHPRVKVIFVNIFGGITRADEVALGIKEALAESGGTNKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+R++G N ++G  ++AE G+ +      ++AA+K V   +
Sbjct: 343 VVRMKGTNEELGRAILAEIGVPLF--DSAEEAAKKAVELAR 381


>gi|261749142|ref|YP_003256827.1| succinyl-CoA synthetase subunit beta [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497234|gb|ACX83684.1| succinyl-CoA synthetase, beta subunit [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 409

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 159/412 (38%), Positives = 232/412 (56%), Gaps = 31/412 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           MN+HE+Q K +LR ++V +  GV++++   A  A K +         V+K+QIHA     
Sbjct: 1   MNLHEFQGKEILRSFSVKIPDGVLVTTPEEAVQAAKMIFKKTNKNSLVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL- 115
                      GG+++  SL+ V    + +LG  LIT QT   G  V  V + D      
Sbjct: 56  -----GGRGKGGGIQIAKSLEEVYEKSKNLLGKYLITPQTSKKGKLVRKVLISDDVYSTP 110

Query: 116 --------------RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
                         +E YLS+LV+R       + S +GG+DIE+++K  P KIF   IDP
Sbjct: 111 NRMGEIMKNSFFSPKEYYLSILVNRDIEKNVILYSKEGGIDIEDISKKRPDKIFLEEIDP 170

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
            +G+    V  +   L L  +   D  +   +LY A+   D  LLEINPLI   + ++  
Sbjct: 171 FLGLQLFQVRKIGYNLGLNEEVLKDFRNFLISLYNAYLSCDALLLEINPLIRTFDHQIVA 230

Query: 222 LDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
           +D+K+  DDNAL+R       RD  EED  EIEA +  L+++ L+GN+GCMVNGAGLAMA
Sbjct: 231 VDTKMVLDDNALFRQKKYASFRDQKEEDPVEIEAFEAKLNFLKLEGNVGCMVNGAGLAMA 290

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           TMD+IK  GG P+NFLD+GG AD+++V  AF+II  D SVK I INIFGGI+RCD + +G
Sbjct: 291 TMDMIKSCGGNPSNFLDIGGSADKERVEKAFQIILKDPSVKAIFINIFGGIVRCDTVAEG 350

Query: 342 ILSAVK--EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           I+++    + KI IP+++RL+G N  +  + +  S L +     L +AA +I
Sbjct: 351 IINSYHNIDHKIKIPVIVRLQGTNEMVAKKRLENSQLPIYYTSTLKEAADRI 402


>gi|119872536|ref|YP_930543.1| succinyl-CoA synthetase subunit beta [Pyrobaculum islandicum DSM
           4184]
 gi|189081778|sp|A1RTB8|SUCC_PYRIL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119673944|gb|ABL88200.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pyrobaculum
           islandicum DSM 4184]
          Length = 382

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/401 (34%), Positives = 221/401 (55%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  +Y V +  G +  +        + +  P+ V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFLRYGVKIPPGKLALTPDEVRKIAEEIGTPV-VLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  + +      +++ G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKIAQTPEEAYELSKKMFGMNI-------KGLVVRKLYVTKYVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR S    F+AS  GG+DIEE+AK  P+KI K+ +DP IG+    + S+   L  +
Sbjct: 103 SLIIDRASRRYLFLASPIGGVDIEEIAKTSPEKIKKVYVDPSIGLRDYHIRSIISWLGFK 162

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              Q       +   +Y+   D D  L+E NPL + K G +  LD+++  DDNAL++H D
Sbjct: 163 PGSQQWQQTASVIQAMYRIMVDYDAELVETNPLALSKEGEVIPLDARVIVDDNALFKHPD 222

Query: 239 IQE--LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++    D  +    E  AK+    Y+ LDG+IG + NGAGL MATMD++  +GG PANF
Sbjct: 223 LEKALEEDPRDITEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPL 355
           LD+GGGA ++ V  A K++ +   VK I +NIFGGI R D +  GI  A+ EVK     +
Sbjct: 283 LDIGGGASREVVKEAVKVLLNHPRVKVIFVNIFGGITRADEVALGIKDALAEVKEHTKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+R++G N + G  +++E G+ +    + ++AA+K V   K
Sbjct: 343 VVRIKGTNEEQGKAILSEIGIPLF--ENAEEAAKKAVELAK 381


>gi|73909235|gb|AAH35149.1| SUCLG2 protein [Homo sapiens]
          Length = 362

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 213/353 (60%), Gaps = 3/353 (0%)

Query: 34  AIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLIT 93
           A K L     V+K+QI AGGRGKG F    +  KGGV +      V    ++++G  L T
Sbjct: 1   AAKRLNAKEIVLKAQILAGGRGKGVF---NSGLKGGVHLTKDPNVVGQLAKQMIGYNLAT 57

Query: 94  KQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
           KQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DIEEVA   P+ 
Sbjct: 58  KQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPEL 117

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
           IFK  ID   G+       + + L   G  +    D    LY  F   D + +E+NP   
Sbjct: 118 IFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGE 177

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV 273
              G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI LDGNI C V
Sbjct: 178 TPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFV 237

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ IL+NIFGGI+
Sbjct: 238 NGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIV 297

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +AIDL+D
Sbjct: 298 NCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 350


>gi|296242753|ref|YP_003650240.1| succinyl-CoA synthetase subunit beta [Thermosphaera aggregans DSM
           11486]
 gi|296095337|gb|ADG91288.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermosphaera
           aggregans DSM 11486]
          Length = 376

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/397 (36%), Positives = 225/397 (56%), Gaps = 22/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY++K + RKY V   +GV+ SS   A  A +       V+KSQ+  GGRG     
Sbjct: 1   MKLYEYESKDIARKYGVQTPRGVLASSPEEALRAAEEFGA--VVLKSQVLVGGRGLA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    S        +E+LG  +        G RV  + VE+   + RE Y+
Sbjct: 56  -------GGILKAESPAEAYMKAKELLGKMI-------KGERVEKLLVEEKICVAREYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR +  + ++ S+ GG++IEE+A+ +P+KI ++ +DP IG            +EL 
Sbjct: 102 SITVDRATKQITYLVSSMGGVEIEELARKHPEKIKRMSVDPSIGYLGYMGREAAVFMELP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +Y+   D D  L+E NPL +  + +L  LD+KI  DDN+L++H ++Q
Sbjct: 162 WSLSNQVDHVLSAMYRIMIDYDAELVEFNPLALTCDNKLIALDAKIIVDDNSLFKHPELQ 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L         E +AK+   +Y+ LDG+IG + NGAGL MATMD I  YGG PANFLD+G
Sbjct: 222 ALY-GRGLTPYERKAKELGFNYVELDGDIGVISNGAGLTMATMDAILYYGGRPANFLDIG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  A K++ +   VK +L+NIFGGI RCD +  G+L A+ E  ++ P+V+R+ 
Sbjct: 281 GGAGRERVKEAVKLLLTHPKVKALLVNIFGGITRCDEVAHGVLEALAEAGVSKPVVVRML 340

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G R+++E G+ V +  ++D+A +KIV   +G
Sbjct: 341 GTNEEEGRRILSEKGITVYS--EMDEAVRKIVEYSRG 375


>gi|291295751|ref|YP_003507149.1| succinyl-CoA synthetase subunit beta [Meiothermus ruber DSM 1279]
 gi|290470710|gb|ADD28129.1| succinyl-CoA synthetase, beta subunit [Meiothermus ruber DSM 1279]
          Length = 378

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 150/397 (37%), Positives = 210/397 (52%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L KY +PV  G +  +   A+         L V+K+Q+H GGRGK    
Sbjct: 1   MNLHEYQAKEILAKYGIPVPPGKIAFTADEAKQIASEYG-DLVVIKAQVHTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G     V V  G  I +E Y 
Sbjct: 57  -------GGVKLARTPEEAREKATQILGLNI-------NGFITKKVLVAKGLHIAKEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR S  V  + S +GG+DIEEVA   PQ + K  IDP  G+   +   L     ++
Sbjct: 103 GMILDRVSQRVVLMLSKEGGVDIEEVAATRPQALIKYPIDPHKGLRPFEARELVKRAGME 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   LY+A+   D S  EINPL+I  +G +   D+KI  DDNALYRH D+ 
Sbjct: 163 GNL-NKLADVLVKLYQAYVGIDASTAEINPLVITDSGEVVAADAKIVLDDNALYRHPDLT 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LR+   E   E+EA  +  SY+ LDGNIG + NGAGL M T+D+++  GG  ANFLD+G
Sbjct: 222 PLREFEAEHPLEVEASNYGFSYVKLDGNIGVIGNGAGLVMYTLDLVQRCGGKAANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D V  A K++  D  VKG+ INIFGGI R D + KG++ A+ E  +  P+ MR+ 
Sbjct: 282 GGAKADIVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALDEGLLTKPVAMRVA 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +    L+   G  V       +AA+ I+    G
Sbjct: 342 GTAEEEAKTLLK--GRPVYMYPTSVEAAKAIISMTGG 376


>gi|309791923|ref|ZP_07686405.1| succinyl-CoA synthetase, beta subunit [Oscillochloris trichoides
           DG6]
 gi|308226041|gb|EFO79787.1| succinyl-CoA synthetase, beta subunit [Oscillochloris trichoides
           DG6]
          Length = 378

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 162/385 (42%), Positives = 234/385 (60%), Gaps = 21/385 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQA+ LL +Y +PV  G V S+   A +  + +   + V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYQARDLLARYGIPVTGGGVASTPAEARAIAEQIGAKV-VIKAQVFVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +       +ILG  +        G  V  V V +     +E+YL
Sbjct: 57  -------GGVKLAETPEQAEQVAAQILGMDI-------KGLTVEKVLVAEAISYQKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +  V  IAS +GG++IEEVAK  P  I K+   P +G+       L   + L+
Sbjct: 103 SAILDRATKRVMMIASAEGGVEIEEVAKTNPDAIIKIAAHPQLGLLEYQARELAFAIGLK 162

Query: 181 -GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   LY+ F + D SL EINPL+I  +G L+ LDSK+  DD+ L+RH D+
Sbjct: 163 DGKQARQFAQIASALYRVFVETDASLAEINPLVIRDDGSLQALDSKVLLDDSGLFRHADL 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           + +RD S+E   E +A++  +++I LDG IGCMVNGAGLAMATMD++KLYGG PANFLD+
Sbjct: 223 EAMRDPSDEPEAERQAREAGITFIKLDGTIGCMVNGAGLAMATMDVVKLYGGEPANFLDI 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +DKV AA +II +D +VK ++ NIFGGI R D + +GI++A++EV   +P++ RL
Sbjct: 283 GGGAGKDKVKAALQIILADPNVKAVMFNIFGGITRVDEVARGIIAALEEVDTQVPMIARL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDL 384
            G N + G RL+AES L  I A  L
Sbjct: 343 TGTNEEEGRRLLAESRL--IPAATL 365


>gi|145591733|ref|YP_001153735.1| succinyl-CoA synthetase, beta subunit [Pyrobaculum arsenaticum DSM
           13514]
 gi|189081776|sp|A4WL16|SUCC_PYRAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145283501|gb|ABP51083.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 382

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 137/401 (34%), Positives = 222/401 (55%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  KY V +  G V ++        + + GP+ V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFSKYGVKIPPGRVATTPEEVRKIAEEIGGPV-VLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  + +       ++ G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKVAKTPEEAYELATKMFGMNI-------KGLVVKKIYVTKYVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +    F+AS  GG+DIEE+AK  P+KI ++ +DP +G+    V S+   L  +
Sbjct: 103 SLIIDRATRRYLFLASPIGGVDIEEIAKTQPEKIKRVYVDPSVGLRDYHVRSIVLWLGFK 162

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                      +   +Y    D D  L+E NPL + + G +  LD+++  DDNALY+H +
Sbjct: 163 PETPQWRQASSIVQAMYNIMVDYDAELVESNPLAVTREGDVIPLDARVIVDDNALYKHPE 222

Query: 239 IQELRDVSEEDSREIE--AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++  +    D  E E  AK+    Y+ LDG++G + NGAGL MATMD++  +GG PANF
Sbjct: 223 LEKALEEDPRDVSEFEMYAKKIGFHYVELDGDVGIIGNGAGLTMATMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKINIPL 355
           LD+GGGA +D V  A K++     VK I +NIFGGI R D +  G+ +A+ +E      +
Sbjct: 283 LDIGGGASRDVVKEALKVLLRHPRVKVIFMNIFGGITRADEVAAGVEAALAEEGGTKKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+R++G N ++G +++A+ G+ +    + ++AAQK V   +
Sbjct: 343 VVRMKGTNEELGRQMLAKLGIPLY--ENAEEAAQKAVELAR 381


>gi|302342618|ref|YP_003807147.1| succinyl-CoA synthetase, subunit beta [Desulfarculus baarsii DSM
           2075]
 gi|301639231|gb|ADK84553.1| succinyl-CoA synthetase, beta subunit [Desulfarculus baarsii DSM
           2075]
          Length = 389

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 177/397 (44%), Positives = 242/397 (60%), Gaps = 10/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK +L  + VPV KG +  S   A+     L    YVVK+QIHA         
Sbjct: 1   MNVHEYQAKQMLAAFGVPVPKGGLAESAAQAQDVANGLAAEGYVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +         ++LG  L+T QTGP G +V  V++E    I +ELYL
Sbjct: 52  -GGRGKGGGVKVVKTAAEAAEAAAKMLGMHLVTHQTGPEGKKVRKVWIEQATAIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR S  +A +AS  GGMDIEEVA   P++IF   IDP   + +     L     L 
Sbjct: 111 AVVLDRASECLAVMASPDGGMDIEEVAAKTPERIFATRIDPGQSLWAFQARKLLFGCGLN 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                 G  L  NL +   +K+ +L+EINPL++   G L  +D+KI+FDD+AL R  D+ 
Sbjct: 171 AAQVRQGETLLKNLARLAWEKEATLVEINPLVVTAAGDLLAVDAKINFDDSALKRQPDVA 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D  E D  E+ A +  L+YI L+GN+G MVNGAGLAMATMD+IK+ G  PANFLDVG
Sbjct: 231 ALKDPLETDPLELAATEQGLNYIRLNGNVGTMVNGAGLAMATMDVIKMAGAEPANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  AF+II  D +V+ ILINIFGGI+RCDVL  G+++A ++V + +PLV+RLE
Sbjct: 291 GGASEEMITKAFEIILEDQNVQAILINIFGGILRCDVLAAGVVAAARKVDLKLPLVVRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G NV+ G R++AES L    A  L +AA+KI     G
Sbjct: 351 GTNVEEGRRILAESDLAFEVAASLSEAAEKIAKVAGG 387


>gi|146181817|ref|XP_001023435.2| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila]
 gi|146144022|gb|EAS03190.2| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 429

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/404 (41%), Positives = 248/404 (61%), Gaps = 14/404 (3%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFK 60
           ++HEYQ+K ++RK+N+ V KG +  +   A    + L P    ++K+Q+HAGGRGKG   
Sbjct: 23  DLHEYQSKDIMRKFNIRVQKGDIALTPEQARKVAEPLDPTGGLILKAQVHAGGRGKGHL- 81

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV+V  + + V +  ++++G  LIT QT   G RV+ V V +G DI+R++YL
Sbjct: 82  --TSGLKGGVKVLKTPQEVETYTKQMIGYNLITHQTPKAGLRVDAVLVHEGVDIVRQIYL 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR S   A +AS  GG+DIEEVAK +P+ I    I P  G+T  D+ ++   L+L 
Sbjct: 140 AFILDRNSQKPAIVASVNGGVDIEEVAKTHPESIIVQPICPSAGLTDADLNTVISKLQLT 199

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  D      NLY+ F   D + +EINP       +L  +D+KI+ DDNA +R  ++ 
Sbjct: 200 HIA-EDAKTQIKNLYQMFNKLDATQVEINPWATDPKDKLYCVDAKINIDDNAKFRQQELV 258

Query: 241 ELRDVS----EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +LR  S    + D  E +A Q  L+Y+ALDGNIGC+VNGAGLAM TMDIIKL GG+PANF
Sbjct: 259 QLRKNSVASEDVDPHEEKAIQAGLAYVALDGNIGCLVNGAGLAMGTMDIIKLCGGSPANF 318

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA+ ++V  AF+I+ +   V+ + INIFGGI+ C ++ +GI+ A + V + +PLV
Sbjct: 319 LDVGGGANVEQVKTAFEILNAHPKVETVFINIFGGILSCKLIAEGIIKAAQLVSLRVPLV 378

Query: 357 MRLEGANVDIGNRLI-----AESGLNVITAIDLDDAAQKIVHAV 395
           +RL G   D+G +L+         + +    DL D+A+  V   
Sbjct: 379 VRLSGNQADVGRKLLLEFTDKNPSIKIRVGQDLGDSAELAVKTA 422


>gi|330443809|ref|YP_004376795.1| succinyl-CoA synthetase beta chain [Chlamydophila pecorum E58]
 gi|328806919|gb|AEB41092.1| Succinyl-CoA synthetase beta chain [Chlamydophila pecorum E58]
          Length = 387

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 156/396 (39%), Positives = 230/396 (58%), Gaps = 10/396 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++HEYQAK LL  Y VP+    V+ S+      ++ L     VVK Q+HAGGRGK    
Sbjct: 1   MHLHEYQAKDLLTSYEVPIPPYRVVFSISEVPQVLQDLGMDSGVVKVQVHAGGRGKH--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S + ++  + +++G   I+ QT      V  V +     I +E Y+
Sbjct: 58  -------GGVVVAKSTEEILQAVTKLIGMRFISNQTSGEALPVEKVLISPLVGIAKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++DR       + S  GGMDIEE+A+ +P+ +  L +     + +  +   C  +E  
Sbjct: 111 AVIMDRKHRCPTLMLSKSGGMDIEEIAQKFPELLLFLPLTVFGKIYTYQLRQACSFMEWS 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G     G  L   L + F D D SLLE+NPL++     L  LD+K++ DDNALYRH  ++
Sbjct: 171 GDIANQGVKLIKKLIQCFYDNDASLLEVNPLVLTDADELVALDAKVTLDDNALYRHPHLE 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S+E+ R++ AKQ  LSYIALDG+IGC+VNGAGLAM+T+DI+K YGGA ANFLDVG
Sbjct: 231 ACYDPSQENIRDVLAKQVGLSYIALDGDIGCIVNGAGLAMSTLDILKFYGGAAANFLDVG 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A   ++  A  ++ SD  VK + INIFGGIM C ++  G++S +   K  +P+V+RLE
Sbjct: 291 GSASAQQIKEAVSLVLSDERVKVLFINIFGGIMDCSLVSSGLVSVMGTRKDTLPIVLRLE 350

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G NVD+G  ++ +SG++      + + AQ  V   +
Sbjct: 351 GTNVDLGKTIVQQSGISCHFVSSMQEGAQLSVTLSR 386


>gi|288921662|ref|ZP_06415931.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EUN1f]
 gi|288346931|gb|EFC81239.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EUN1f]
          Length = 388

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 148/393 (37%), Positives = 217/393 (55%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G V ++   A      L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKKLFAEHGVPVPTGKVATTPQQAREIATELGGKV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    +        ILG  +        G  V+ V VE+ +DI  E Y 
Sbjct: 57  -------GGVKVADGPEDAYEKASAILGMDI-------KGHTVHSVLVEEASDIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P  + ++ IDPL GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATNPAALARIHIDPLTGVDAAKAREIAVAAKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   L+K F   D +L+E+NPLI+  +GR+  LD K++ D+NA +RH +  
Sbjct: 163 DAALDGASTLLAKLWKVFVKSDATLVEVNPLILTGDGRVVALDGKVTLDENADFRHPENA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           +L DV+  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 DLVDVAAVDPLEQKAKEKGLNYVKLEGQVGIIGNGAGLVMSTLDVVTYAGEEFGGQKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIP 354
           FLD+GGGA  + +A    II  D SVK + +NIFGGI  CD +  GI+ A+  V  +  P
Sbjct: 283 FLDIGGGASAEVMANGLSIILGDPSVKSVFVNIFGGITACDAVANGIIQALDIVGNVTTP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           LV+RL+G N + G R++ E+ L+V+  +D  D 
Sbjct: 343 LVVRLDGNNAEEGRRILKEANLSVVKPVDTMDG 375


>gi|256052164|ref|XP_002569646.1| succinyl-CoA synthetase beta chain [Schistosoma mansoni]
 gi|227284350|emb|CAY16894.1| succinyl-CoA synthetase beta chain, putative [Schistosoma mansoni]
          Length = 441

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 155/405 (38%), Positives = 232/405 (57%), Gaps = 17/405 (4%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ EYQ K L+  + + V + V++ +    ++         YV+K+QI AGGRG G F++
Sbjct: 23  NLQEYQCKKLMLDHGINVQRFVLVRNPGEVDTTKHNFRVKEYVIKAQIPAGGRGMGVFRD 82

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                KGGV +      +   + ++LG+ LITKQT  +G  V+ V V +  DI RE Y +
Sbjct: 83  ---GFKGGVHLTKDPDEMALIVSKMLGNHLITKQTTSSGILVSQVMVAEALDIHRETYFA 139

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DRTS     +A ++GGMDIEE+AK  P +I K  ID  +GVT +  +     L    
Sbjct: 140 ILMDRTSNSPIMVACSKGGMDIEELAKRCPSEIIKEPIDVTVGVTEDQASRFATALGFNP 199

Query: 182 QAR--IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +           LYK F   D   +E+NP    K+G++   D+K++FD NA+YR  ++
Sbjct: 200 HTQLYEQTCKQIQKLYKMFTALDCVQVEVNPFGETKDGQIVCFDAKLAFDQNAIYRQPEV 259

Query: 240 QEL------RDVSEEDSR-----EIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIK 287
            ++       +V+    +     E +A  + L+YI LD GNIGC+VNGAGLAMATMD+I 
Sbjct: 260 HKMALEVEAVEVAASGPKSAAALEADATHNGLNYIGLDDGNIGCIVNGAGLAMATMDLIH 319

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
            + G PANFLD+GG     +V  AF I+  DS +  IL+NIFGGI+ C  + +G++SA+K
Sbjct: 320 YHHGKPANFLDLGGSVTTSQVEKAFHILARDSRIDCILVNIFGGIVNCKTIAEGLISALK 379

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
              +NIP+V+RL+G N      LI++SGL +I    L++AA   V
Sbjct: 380 NGIVNIPVVVRLQGNNAIEAQSLISDSGLELIAVNSLEEAASLAV 424


>gi|21264526|sp|O28732|SUCC1_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-1;
           AltName: Full=Succinyl-CoA synthetase subunit beta-1;
           Short=SCS-beta-1
          Length = 382

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 24/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  K+ + V +G V +S   AE   + L G + VVK+QI  GGRGK    
Sbjct: 1   MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGRV-VVKAQILVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +S +      ++ILG T+        G RV  V VE+  ++ +E Y+
Sbjct: 57  -------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VD++S +   I S  GGMD+EE+A  +P  I ++  DPL G+   +V         +
Sbjct: 103 GYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      D+   L       +  L EINPL +   G     D++++ DDNALYRH ++ 
Sbjct: 163 GEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVTDEG-FLAADARLNTDDNALYRHPELA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+ +EED  E EA+   ++Y+ L GN+G + NGAGLAMATMDII L GG PANFLD G
Sbjct: 222 ELREATEEDPLEREARLKGINYVHLGGNVGVIANGAGLAMATMDIINLMGGKPANFLDTG 281

Query: 301 GG-ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  K+      +  D +V+ + INI+  I RC+ + +GI+ A+ E    +PLV++L
Sbjct: 282 GGLADPVKMKNCLLHVLKDPNVRVVFINIYAEITRCEKVAEGIILALDEAPRKVPLVVKL 341

Query: 360 EGANVDIGNRLIA----ESGLNVITAIDLDDAAQKIVHAV 395
            G N +IG  ++     E G  +     +++ A+K V   
Sbjct: 342 AGTNEEIGREMLERYSSEKGAEIHFVESIEEGARKAVELA 381


>gi|11499135|ref|NP_070369.1| succinyl-CoA synthetase, beta subunit (sucC-1) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649021|gb|AAB89706.1| succinyl-CoA synthetase, beta subunit (sucC-1) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 383

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 24/400 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +  K+ + V +G V +S   AE   + L G + VVK+QI  GGRGK    
Sbjct: 2   MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGRV-VVKAQILVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +S +      ++ILG T+        G RV  V VE+  ++ +E Y+
Sbjct: 58  -------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VD++S +   I S  GGMD+EE+A  +P  I ++  DPL G+   +V         +
Sbjct: 104 GYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFE 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      D+   L       +  L EINPL +   G     D++++ DDNALYRH ++ 
Sbjct: 164 GEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVTDEG-FLAADARLNTDDNALYRHPELA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELR+ +EED  E EA+   ++Y+ L GN+G + NGAGLAMATMDII L GG PANFLD G
Sbjct: 223 ELREATEEDPLEREARLKGINYVHLGGNVGVIANGAGLAMATMDIINLMGGKPANFLDTG 282

Query: 301 GG-ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  K+      +  D +V+ + INI+  I RC+ + +GI+ A+ E    +PLV++L
Sbjct: 283 GGLADPVKMKNCLLHVLKDPNVRVVFINIYAEITRCEKVAEGIILALDEAPRKVPLVVKL 342

Query: 360 EGANVDIGNRLIA----ESGLNVITAIDLDDAAQKIVHAV 395
            G N +IG  ++     E G  +     +++ A+K V   
Sbjct: 343 AGTNEEIGREMLERYSSEKGAEIHFVESIEEGARKAVELA 382


>gi|126460262|ref|YP_001056540.1| succinyl-CoA synthetase subunit beta [Pyrobaculum calidifontis JCM
           11548]
 gi|189081777|sp|A3MWQ7|SUCC_PYRCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126249983|gb|ABO09074.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Pyrobaculum
           calidifontis JCM 11548]
          Length = 382

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 138/401 (34%), Positives = 216/401 (53%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK L  KY V +  G +  +      A + +  P  V+K+Q+   GRGK    
Sbjct: 1   MKLHEYEAKELFAKYGVKIPPGRLALTPEEVRKAAEEMG-PPVVLKAQVVVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V   ++      +++ G  +        G  V  +YV    ++ RE+YL
Sbjct: 57  -------GGIKVAKRVEEAYELSKQMFGMNI-------KGLTVRKLYVTKYLEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +    F+AS  GGMDIEE+AK  P+KI ++ +DP +G+    V S+   L   
Sbjct: 103 SLIIDRATRRFLFLASPVGGMDIEEIAKTTPEKIKRVYVDPFVGLRDYHVRSIVSWLGFS 162

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                      +   +YK   D D  L+E NPL + K G +  LD+++  DDNAL+RH +
Sbjct: 163 PGTAQWQQAASIVQAMYKIAVDYDAELVESNPLALTKEGDVVPLDARVIVDDNALFRHPE 222

Query: 239 IQE--LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++    D  +    E  AK+    Y+ LDG+IG + NGAGL MATMD++  +GG PANF
Sbjct: 223 LEKALEEDPRDITEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK-EVKINIPL 355
           LD+GGGA ++ V  A K++ +    K I INIFGGI R D +  G+  A++        +
Sbjct: 283 LDIGGGASREVVREAVKVLLNHPRAKVIFINIFGGITRADEVAYGVKEALQAAGGTTKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+R++G N ++G  ++AE G+ +      ++AA+K V   K
Sbjct: 343 VVRMKGTNEELGRAILAEIGVPLF--ESAEEAAKKAVELAK 381


>gi|316976921|gb|EFV60115.1| succinyl-CoA synthetase beta chain [Trichinella spiralis]
          Length = 470

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 150/395 (37%), Positives = 240/395 (60%), Gaps = 3/395 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EY +K LL  + + V K +V+ +   A   ++      YVVK+QI AGGRGKG+F 
Sbjct: 66  LHLQEYHSKQLLDNFGLTVQKFIVVEAAEEAAVRLQKFVANEYVVKAQILAGGRGKGKFD 125

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +GGV++  S K  I  +++++   L T QT   G  V  V + +   I RE YL
Sbjct: 126 N---GLEGGVKLARSPKQAIEYVKKMVNHRLFTNQTSSDGILVKKVMIAESVPIWREGYL 182

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++VDRT      IAS  GG+DIEEV+   P+ + KL ID  +G++      +   L+  
Sbjct: 183 AIMVDRTLESPLIIASPSGGVDIEEVSVKSPELMLKLPIDLEVGLSPAVALKIAKFLQFS 242

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     D   +LY+ F   D +++E+NP+    N  + ++D+K+ FDDNA +R  +I 
Sbjct: 243 ENATEKAKDEILHLYEMFVRTDATMIEVNPICETTNSDVYLVDAKLHFDDNASFRQREIF 302

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L ++S+ D RE EA+ + L+++++DGNIGC+VNGAGLAMATMD+IKL+GG PANFLDVG
Sbjct: 303 ALTNLSDRDPRENEAESYGLNFVSMDGNIGCLVNGAGLAMATMDLIKLHGGEPANFLDVG 362

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  +V+   +II+ D  VK I +NIFGGI+ C  + +G+++A++++   +P+++RLE
Sbjct: 363 GSADASQVSHGIEIISHDPKVKAIFVNIFGGIVNCQTIARGVIAAMEKIGSRLPIILRLE 422

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G +     RL+ ES   ++ A +++      + A+
Sbjct: 423 GTDDLTAKRLLRESHQTMLMANNMEHGVSLSIEAI 457


>gi|242007846|ref|XP_002424730.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
 gi|212508223|gb|EEB11992.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
          Length = 372

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 161/362 (44%), Positives = 227/362 (62%), Gaps = 3/362 (0%)

Query: 24  VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI 83
           ++S+   A+   K L    YVVK+QI AGGRG G F       KGGV +  +   V + +
Sbjct: 2   LVSNHDEADKVAKDLRVEEYVVKAQILAGGRGVGVF---SNGFKGGVHLTKNPSEVGNLV 58

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           +++LG+ LITKQT   G  VN V V +  DI +E Y S+L+DRT      + S +GG+DI
Sbjct: 59  KQMLGNKLITKQTPKDGILVNKVMVAESVDIQKETYFSILMDRTHNGPVVVVSAEGGVDI 118

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           E VA+  P+ I  + ID   G+T +      + L+  G ++         L+K F D D 
Sbjct: 119 ENVAEKNPEAIKIIPIDIFKGLTDDIAVQAAEFLKFTGVSKEKAVSEMKKLWKFFLDVDA 178

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           + +EINPL       +  +D+KI+FDDNA YR  DI E+ + +E D RE+ A Q NL+YI
Sbjct: 179 TQVEINPLAESSKNDVVAVDAKINFDDNAQYRQKDIFEMENKTEIDPRELLASQFNLNYI 238

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            L+GNIGC+VNGAGLAMATMDIIKL GG PANFLDVGG  ++++V  AFK++T D+ VK 
Sbjct: 239 PLEGNIGCLVNGAGLAMATMDIIKLEGGEPANFLDVGGNVNENQVTEAFKLLTYDNKVKA 298

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+N+FGGI+ C  + KGI++A K++ +  P+V+RLEG NV+   +++  SGL +I A  
Sbjct: 299 ILVNVFGGIVNCATIAKGIVAACKKINVKTPIVVRLEGTNVNEAKKILENSGLPIINAKG 358

Query: 384 LD 385
           L 
Sbjct: 359 LQ 360


>gi|332022241|gb|EGI62556.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Acromyrmex echinatior]
          Length = 403

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 169/395 (42%), Positives = 221/395 (55%), Gaps = 50/395 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+ + +LL +  VP  K  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 38  LNVHEHISYSLLNEAGVPTPKFGVAKTPDEAAKLAADLKTKDIVLKAQVLAGGRGKGHFK 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                S  GV++  + +   S   ++LG  LITKQTG  G   N V V       +E YL
Sbjct: 98  ---GTSVSGVKMCETPEEAKSLAGQMLGKLLITKQTGEGGRICNAVMVTQRMFPRKEYYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R  G    IAS+QGG++IEEVA   P  I    ID   G+T E            
Sbjct: 155 AVMMERAFGGPVIIASSQGGVNIEEVAATNPSAIMYEPIDINKGITKEQAEHF------- 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                                                    LD K  FDDNA +R   + 
Sbjct: 208 ----------------------------------------ALDCKCRFDDNAEFRQKALF 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD ++ED +E+EA + +L+YIALDGNIGCMVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 228 NLRDWTQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    V  AFKIITSDS V  +L+NIFGGIMRCDV+ +GI++A KE+ + IP+V+RL+
Sbjct: 288 GGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 347

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA +GL ++   DLD+AA+  V   
Sbjct: 348 GTNVDEAKALIANAGLKIVPIDDLDEAARVAVKLS 382


>gi|256831911|ref|YP_003160638.1| succinyl-CoA synthetase, beta subunit [Jonesia denitrificans DSM
           20603]
 gi|256685442|gb|ACV08335.1| succinyl-CoA synthetase, beta subunit [Jonesia denitrificans DSM
           20603]
          Length = 388

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 136/403 (33%), Positives = 222/403 (55%), Gaps = 25/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  GVV ++   A +  + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGVVATTPQEARNGAEQLGGGTVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      +EILG  +        G  V+ V +  GA I +E Y+
Sbjct: 58  -------GGVKLAHSPQEAHDRAQEILGMDI-------KGHTVHRVMIAQGASIDQEFYV 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     +AS +GGM+IE++A + P+ + ++ +DP +G+       +       
Sbjct: 104 SILLDRANRSYLAMASVEGGMEIEQLAVERPEALARVAVDPTVGIDDAKAIEIAHAANFA 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L+  + D+D +L+E+NPL++  +G +  LD K+S DDNA +RH D  
Sbjct: 164 PELTAKVVEVLKKLWVVYRDEDATLVEVNPLVLTSDGDIVALDGKVSLDDNASFRHPDHG 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           +L D    D  E +A++++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 224 DLADSEATDPLEAKAQENDLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGERHGGVRPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA    +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +      
Sbjct: 284 FLDIGGGASASVMAAGLDVILGDPQVKSVFVNVFGGITACDEVANGIVTALDILGDTATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G  ++  +   ++T A  +D  A +     
Sbjct: 344 PLVVRLDGNNVDEGRAILRAAAHPLVTLADTMDGGADRAAELA 386


>gi|301057860|ref|ZP_07198928.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
 gi|300448056|gb|EFK11753.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
          Length = 392

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 172/399 (43%), Positives = 241/399 (60%), Gaps = 13/399 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQAK  L  Y V V +G +  +   A    K L G + V+K+QIHAG RGK    
Sbjct: 1   MRIHEYQAKKFLADYGVSVPRGAMAKTAAEAAGIAKELGGRV-VIKAQIHAGARGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   S      +   +LGS L T QTG  G  VN V VE+  + ++ELYL
Sbjct: 57  -------GGIKTVDSPDEAERETSSLLGSRLKTHQTGEEGLIVNSVLVEEALNSIKELYL 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL 179
            + +D  +G    +AS  GGM+IE++A+  P+KI K  +DP    +       +   L+L
Sbjct: 110 GIAIDSATGAPLLMASEAGGMEIEQIAEKTPEKIVKCHVDPGTLQLRGFQAREIGFGLKL 169

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             + R    D+ P L   F +KD SL EINPL +  +GR+  +D+K++FDD+ALYRH DI
Sbjct: 170 GDKERAAVIDIVPRLCSLFVEKDCSLAEINPLSVTADGRVLAVDAKLNFDDSALYRHADI 229

Query: 240 QELRDVSEEDSREIEAKQHNL-SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +EL D  +E+  E+ AK+  + SY+ L+G+IG MVNGAGLAMA MD IK  GG PANFLD
Sbjct: 230 KELYDPHQENELEMMAKKKGIASYVKLEGDIGSMVNGAGLAMAVMDAIKHIGGKPANFLD 289

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +G   + ++V  AFKII SD  VK IL+NIFGG+ R DV+ +G++ A  ++ I +P+V R
Sbjct: 290 LGTVNNPERVLNAFKIIASDPGVKCILVNIFGGMARVDVITRGLVEAYSQIDIKVPVVAR 349

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           L+G N   G R+++ESG+N+I A    +A +K V A  G
Sbjct: 350 LKGTNAAEGERILSESGINLIKADAFHEAIEKAVTAASG 388


>gi|226466884|emb|CAX69577.1| succinate-Coenzyme A ligase, GDP-forming, beta subunit [Schistosoma
           japonicum]
          Length = 441

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 162/408 (39%), Positives = 234/408 (57%), Gaps = 17/408 (4%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E+Q K L+  Y + V K +V+ +      A        YV+K+QI AGGRG G F++
Sbjct: 23  NLQEFQCKELMSNYGINVQKFIVVRNPSEVNLAKNNFIVEEYVIKAQIPAGGRGMGVFRD 82

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                KGGV +      +   + ++LG+ L+TKQT  +G  V+ V V +  DI RE Y +
Sbjct: 83  ---GFKGGVHLTKDPNEMAHIVMKMLGNHLVTKQTTSSGILVSQVMVAEALDIRRETYFA 139

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR S     IA +QGGMDIEE+AK  P  I K  I+  IGVT E      + L    
Sbjct: 140 ILMDRISNSPIMIACSQGGMDIEELAKHCPSTIIKESINVTIGVTDEQACRFANALGFTP 199

Query: 182 QAR--IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           Q +   +      NLYK F   D   +EINP    K+G++   D+K++FD NA+YR  +I
Sbjct: 200 QTKLYEETCKQIRNLYKMFTALDCVQIEINPFGETKDGQIVCFDAKLAFDQNAIYRQPEI 259

Query: 240 QELR------DVSEEDSREI-----EAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDIIK 287
            ++       +V+      +     +A  + L+YI L DGNIGC+VNGAGLAMATMD+I 
Sbjct: 260 HKMALEVEDIEVAASGPNSVTALEADAAHNGLNYIGLNDGNIGCIVNGAGLAMATMDLIH 319

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
            + G PANFLD+GG   + +V  AF +++  SS+  IL+NIFGGI+ C ++ +G+LSA+K
Sbjct: 320 YHHGKPANFLDLGGSVTRSQVEKAFCLLSRHSSINCILVNIFGGIVNCKIIAEGLLSALK 379

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
              INIP+V+RLEG +      LI+  GL++I A  L++AA   V   
Sbjct: 380 NNIINIPVVVRLEGNSAVEAQSLISNCGLDLIAATSLEEAASIAVSKA 427


>gi|289641099|ref|ZP_06473267.1| succinyl-CoA synthetase, beta subunit [Frankia symbiont of Datisca
           glomerata]
 gi|289509040|gb|EFD29971.1| succinyl-CoA synthetase, beta subunit [Frankia symbiont of Datisca
           glomerata]
          Length = 388

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 149/393 (37%), Positives = 216/393 (54%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L   + VPV  G V ++   A      L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKKLFADHGVPVPSGKVATTPDEARGIATDLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V        +    ILG  +        G  V+ V VE  +DI  E Y 
Sbjct: 57  -------GGVKVADGPDDATARASAILGMDI-------KGHTVHSVLVEQASDIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+ + ++ IDPL+GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMCSREGGMEIEEVAATKPEALARIPIDPLVGVDATIARQIAVAAKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     +L   L++ F   D +L+E+NPLI+  +GR+  LD K+S D+NA +RH D  
Sbjct: 163 EAALDGATELLVKLWEVFVRADATLVEVNPLILTGDGRVVALDGKVSLDENASFRHSDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
              DV+  D  E  AK+ +L+Y+ L G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFVDVAAVDPLEQRAKEKDLNYVKLSGQVGIIGNGAGLVMSTLDVVTYAGEEFGGQRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIP 354
           FLD+GGGA  + +A    II SD +VK + +NIFGGI  CD +  GI+ A+K V  I  P
Sbjct: 283 FLDIGGGASAEVMADGLSIILSDPAVKSVFVNIFGGITACDAVANGIVQALKIVGDITTP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           LV+RL+G N + G R++ E+ L+V+  +D  D 
Sbjct: 343 LVVRLDGNNAEEGRRILREANLDVVKPVDTMDG 375


>gi|86739364|ref|YP_479764.1| succinyl-CoA synthetase subunit beta [Frankia sp. CcI3]
 gi|123765273|sp|Q2JFA7|SUCC_FRASC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|86566226|gb|ABD10035.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Frankia sp.
           CcI3]
          Length = 388

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 147/393 (37%), Positives = 219/393 (55%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G   ++   A +    L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKKLFAEHGVPVPTGKTATTPEEARAIATELGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V        +    ILG  +        G  V+ V VE+ ++I  E Y 
Sbjct: 57  -------GGVKVADGPDDAFAKATAILGMDI-------KGHTVHSVLVEEASNIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + ++ IDPL GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATKPEALARIAIDPLKGVDAAKAREIAVAAKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     +L   L+  F   D +L+E+NPLI+  +GR+  LD K+S DDNA +RH + +
Sbjct: 163 EAALDGASELLAKLWTVFVKSDATLVEVNPLILTGDGRVVALDGKVSLDDNADFRHPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
              DV+  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFVDVAAVDPLEQKAKEKGLNYVKLEGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIP 354
           FLD+GGGA  + +A    II  D +VK + +NIFGGI  CD +  GI+ A+K V  ++ P
Sbjct: 283 FLDIGGGASAEVMANGLSIILGDPAVKSVFVNIFGGITSCDAVANGIVQALKIVGDVSTP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           LV+RL+G N + G R++AE+ L V+  +D  D 
Sbjct: 343 LVVRLDGNNAEEGRRILAEANLPVVKPVDTMDG 375


>gi|118365146|ref|XP_001015794.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila]
 gi|89297561|gb|EAR95549.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 534

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 172/441 (39%), Positives = 248/441 (56%), Gaps = 53/441 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL------------YVVKSQIH 50
           +HEYQ   LL+KY++PV  G V +S   A +  + L                +VVK+QIH
Sbjct: 82  LHEYQVMDLLQKYDLPVISGSVATSAEQALNVAQQLKNSKPTNQSQGITFTDFVVKAQIH 141

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
           AGGRGKG FKE     + GV+  +S + V     ++LG TLITKQTG  G  VN V V +
Sbjct: 142 AGGRGKGFFKE--NGMQSGVQFATSPQEVKDIAEKMLGKTLITKQTGLRGRSVNSVLVVE 199

Query: 111 GADILR------------------------------------ELYLSLLVDRTSGMVAFI 134
              + +                                    ELYL++ +DR  G V  I
Sbjct: 200 RTFLRKVICFRNRIVYLFIPQYKFMRKWQQCVRLMFLNKQKQELYLAITLDRKQGGVVII 259

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
            + +GG++IE+  +     +    ++   G+T + +  +   L L  Q       +   L
Sbjct: 260 CNERGGVNIEQQDESS---VKTHFVNVHEGLTQQTLDDISKSLNLGSQYNDQLHKIVKGL 316

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           YK F + D +LLEINPL +  +G+L + D K++ DDNA YR  +I ++ D++++DS+EIE
Sbjct: 317 YKCFSETDSTLLEINPLGLTIDGKLLICDQKMNVDDNAAYRQPEIAQMEDITQKDSKEIE 376

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A Q+ L+YIALDGNIGCMVNGAGLAMATMD+I+   G PANFLD GG AD  +V AA KI
Sbjct: 377 ADQNALNYIALDGNIGCMVNGAGLAMATMDLIQSKNGMPANFLDCGGKADDRQVFAALKI 436

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           +  D +V+ I +NIF GI RCD++  G++ A+ E+ +  P+V+RL+G NVD   ++I +S
Sbjct: 437 MEQDPNVEAIFVNIFAGITRCDIICLGLIRALSELGMKKPIVLRLKGTNVDEAKQIIQDS 496

Query: 375 GLNVITAIDLDDAAQKIVHAV 395
           G N++   DL  AA+K V   
Sbjct: 497 GFNMLVTEDLSQAAEKAVKMA 517


>gi|308376558|ref|ZP_07439285.2| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu008]
 gi|308350724|gb|EFP39575.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu008]
          Length = 432

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 136/403 (33%), Positives = 220/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 46  MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMV-KAQVKIGGRGKA--- 101

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 102 -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 147

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 148 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 207

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 208 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 267

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 268 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 327

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 328 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 387

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T    +D+AA K     
Sbjct: 388 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELA 430


>gi|11499768|ref|NP_071011.1| succinyl-CoA synthetase, beta subunit (sucC-2) [Archaeoglobus
           fulgidus DSM 4304]
 gi|6647836|sp|O28097|SUCC2_ARCFU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-2;
           AltName: Full=Succinyl-CoA synthetase subunit beta-2;
           Short=SCS-beta-2
 gi|2648339|gb|AAB89066.1| succinyl-CoA synthetase, beta subunit (sucC-2) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 380

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 148/401 (36%), Positives = 235/401 (58%), Gaps = 24/401 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  K+ + VA+G + +SV       + L G + V+KSQ+  GGRGK    
Sbjct: 1   MRLHEYQAKQIFSKHGIRVARGELATSVEDVRGIAEELGGKV-VLKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   S++  +   +E+ GS L        G  V  +YVE+  ++ RE+Y 
Sbjct: 57  -------GGIKKAYSVEEAVEKAKEMFGSVL-------KGHIVEKIYVEEMIEVQREMYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L +DR +  +A I S+ GGMDIEE+A  +P+KI ++ ++P  G+    +  L    ++ 
Sbjct: 103 GLTIDRANKGIAAILSSVGGMDIEEIAVKHPEKIARIAVNPKWGLWDYQIRELLLNSQMP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   +   +   LY+     +  L+EINPL++  +G L   D++++ DD+AL+RH D++
Sbjct: 163 REYWKEVASILKTLYRIMVHYEAELVEINPLVVTPDG-LVAADARLNIDDSALFRHRDLE 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +LRD +E D  E  A +  L+Y+ LDGN+G + NGAG+AMATMD+I +YGG PANFLD+G
Sbjct: 222 KLRDYTEADQMERIAMEKGLNYVKLDGNVGVLANGAGMAMATMDLIYIYGGKPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A  +I SD +VK + INIFGGI RCD + KG+  A+ +  ++ P+V+RL 
Sbjct: 282 GGASAEVVREAINLILSDKNVKVVFINIFGGITRCDEVAKGLKEALAD--VSTPVVVRLA 339

Query: 361 GANVDIGNRLIAESGL---NVITAIDLDDAAQKIVHAVKGV 398
           G N + G +++ E      N      +++ A+K V   + V
Sbjct: 340 GTNEEEGRKIMDEFAKDRPNFHIVETMEEGAEKAVKLAEEV 380


>gi|118369102|ref|XP_001017756.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila]
 gi|89299523|gb|EAR97511.1| succinyl-CoA synthetase, beta subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 444

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 158/403 (39%), Positives = 244/403 (60%), Gaps = 15/403 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP----------GPLYVVKSQIHAG 52
           +HEYQ   L ++Y +P+ +    +    A    + L              +VVK+Q+HAG
Sbjct: 30  LHEYQVHNLFKEYKLPLLQAYRATHPEDAIKLAEQLERQKPRNNASQFTDFVVKAQVHAG 89

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE  +  +GGV+   S + V     +++G TLITKQTG  G  V+ V + +  
Sbjct: 90  GRGKGYFKE--SSLQGGVQFAHSPEEVGKIAEKMIGKTLITKQTGSRGRNVSSVMITERI 147

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            + +E+Y S+ +DRT G +  I + +GG++IEE     P+ I    ++P I + +E +  
Sbjct: 148 FLRKEMYFSITLDRTRGGLCIICNEKGGVNIEEGD---PKHIKTFFLEPGIEIPNETLNE 204

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +     L         ++  +LYK F D D +LLEINPL +  + ++++ D K++ DDN+
Sbjct: 205 IIAAYNLGSAFDQQLKNIVTSLYKCFIDNDATLLEINPLGLTIDNQIKLCDQKMNIDDNS 264

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            YR   + ++ D++++D +EIEA+++ L+YIALDGNIGCMVNGAGLAMATMDIIK   G 
Sbjct: 265 SYRQPRLSQMEDITQKDWKEIEAQRYGLNYIALDGNIGCMVNGAGLAMATMDIIKQKNGM 324

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLD GG AD  +V  A KI+ +D +V+ IL+NIF GI +CD++  G++  +  + + 
Sbjct: 325 PANFLDCGGKADDTQVVEALKIMDNDPNVEAILVNIFAGITKCDIICLGLIKGMSLLGMK 384

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            P+++RL+G NV+    +I  SG N+I   DLD+AA+K V   
Sbjct: 385 KPIILRLKGNNVEAAKEIIQNSGFNLIFTEDLDEAAEKAVKTA 427


>gi|313214519|emb|CBY40868.1| unnamed protein product [Oikopleura dioica]
 gi|313226411|emb|CBY21555.1| unnamed protein product [Oikopleura dioica]
          Length = 374

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 162/375 (43%), Positives = 223/375 (59%), Gaps = 6/375 (1%)

Query: 24  VISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI 80
           +  +   A    K L     P  V+K+QI AGGRGKG F       KGGV   +      
Sbjct: 1   MAENEAEAVEGGKYLLESGAPELVIKAQILAGGRGKGTFD---TGFKGGVHFATDPAKCG 57

Query: 81  SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGG 140
             +++++G+ L TKQT P G  V  V V    DI RE YL++L+DR       + S  GG
Sbjct: 58  EYVKQMIGNRLTTKQTLPEGVPVQKVMVAHALDISRETYLAVLMDREFNGPVIVGSPDGG 117

Query: 141 MDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCD 200
           MDIEEVA+  P++IF + ID   G++ E    +   L+  G+      +    LY  F  
Sbjct: 118 MDIEEVAEKTPERIFTMPIDINDGISMEQALEMAKNLQFTGEKANTAAEQIMKLYNMFIA 177

Query: 201 KDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNL 260
            D + +EINP      G +   D+KI+FDDNA YR  DI  + D +E D RE+EA++  L
Sbjct: 178 VDATQVEINPFGETPQGEVVCFDAKINFDDNAAYRQQDIFAMGDDTETDPREVEAEKFGL 237

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSS 320
           +Y+ +DG+IGC+VNGAGLAMATMDIIKL GG PANFLD+GGG  +  V  A +IITSD++
Sbjct: 238 NYVGMDGDIGCLVNGAGLAMATMDIIKLEGGEPANFLDLGGGVQESGVFEALRIITSDAA 297

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           VK +L+NIFGGI+ C+++ +G+  A +E+ I  PLV RLEG NVD    ++A+ G  VIT
Sbjct: 298 VKVVLVNIFGGIVNCEIIARGVNRAYEELGITTPLVCRLEGTNVDSAKEILAKGGHPVIT 357

Query: 381 AIDLDDAAQKIVHAV 395
           +    +AA K V A+
Sbjct: 358 SDSFGEAAVKAVAAL 372


>gi|327298261|ref|XP_003233824.1| ATP-specific succinyl-CoA synthetase beta subunit [Trichophyton
           rubrum CBS 118892]
 gi|326464002|gb|EGD89455.1| ATP-specific succinyl-CoA synthetase beta subunit [Trichophyton
           rubrum CBS 118892]
          Length = 393

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 156/398 (39%), Positives = 222/398 (55%), Gaps = 54/398 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY +  LL+ Y V V KG V  S   AE+  K + G   V+K+Q+ AGGRGKG F 
Sbjct: 34  LSIHEYLSANLLKSYGVGVPKGEVARSGEEAEAIAKNIGGEDMVIKAQVLAGGRGKGTFD 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV  S         +++G  LITKQTG  G   N VY+ +     RE YL
Sbjct: 94  N---GLKGGVRVIYSPTEARMFADQMIGHKLITKQTGAQGRLCNAVYICERKFARREFYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +                                                    
Sbjct: 151 AILMDRQTQAPC------------------------------------------------ 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  +    LYK F +KD + +EINPL    + ++  +D+K+ FDDNA +R  ++ 
Sbjct: 163 ---VPEAVETIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD ++ED+ E++A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG+PANFLDVG
Sbjct: 220 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    + +AF++ITSD  V  I +NIFGGI+RCD + +G+++ V+E+ +  P+V RL+
Sbjct: 280 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 339

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N++  + LI+ESGL + +  DL  AA+K V   K V
Sbjct: 340 GTNMEKAHALISESGLKIFSIEDLQVAAEKSVQFSKVV 377


>gi|28175163|gb|AAH43312.1| Suclg2 protein [Mus musculus]
          Length = 355

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/343 (44%), Positives = 210/343 (61%), Gaps = 3/343 (0%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K+QI AGGRGKG F    +  KGGV +    K V    ++++G  L TKQT   G +V
Sbjct: 4   VLKAQILAGGRGKGVF---NSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKV 60

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
           N V V +  DI RE YL++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   
Sbjct: 61  NKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFE 120

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+       + + L   G  +    D    LY  F   D + +E+NP      G++   D
Sbjct: 121 GIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFD 180

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +KI+FDDNA +R  DI  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT 
Sbjct: 181 AKINFDDNAEFRQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATC 240

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DII L GG PANFLD+GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI 
Sbjct: 241 DIIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGIT 300

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            A +E+++ +PLV+RLEG NV     ++  SGL + +A+DL+D
Sbjct: 301 KACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 343


>gi|295396404|ref|ZP_06806566.1| succinyl-CoA ligase subunit beta [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294970706|gb|EFG46619.1| succinyl-CoA ligase subunit beta [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 388

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 217/403 (53%), Gaps = 25/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV K  V S+   A+ A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEKHGVPVLKAKVASTPEEAQKAAEELGGGTVVVKAQVKIGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +         EILG  +        G   + V + +GADI  E Y 
Sbjct: 58  -------GGVKLAHNPAEAKERAEEILGLDI-------KGHITHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGMDIE +A + P+ + K+ +D + G+       +       
Sbjct: 104 SVLLDRANRTFLAMCSKEGGMDIETLAAERPEALAKVPVDAIDGIDEAKAKQIAVEAGFD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L+  F ++D +L+E+NPL+   +  +  LD K+S DDNA +RH + +
Sbjct: 164 AETAGLVTPVLQQLWTVFKEEDATLVEVNPLVKTGDNTILALDGKVSLDDNASFRHEEHE 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           ELRD+  ED  E++AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 224 ELRDIQAEDPLELKAKKLDLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 284 FLDIGGGASAEVMANGLDVILGDDQVKSVFVNVFGGITACDQVANGIVKALEILGDNATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G  ++A++   ++ T   +D  A K     
Sbjct: 344 PLVVRLDGNAVEEGREILAKANHPLVTTVDSMDGGADKAAELA 386


>gi|269128416|ref|YP_003301786.1| succinyl-CoA synthetase subunit beta [Thermomonospora curvata DSM
           43183]
 gi|268313374|gb|ACY99748.1| succinyl-CoA synthetase, beta subunit [Thermomonospora curvata DSM
           43183]
          Length = 396

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/400 (35%), Positives = 216/400 (54%), Gaps = 31/400 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ E+QAK L  +Y VPV  G V  +   A +  + L        V+K+Q+  GGRGK 
Sbjct: 1   MDLFEHQAKELFAEYGVPVPTGKVAHTPQEARAIAEELFAAGSQKVVIKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++        +   +ILG  +        G  V+ V VE G+ I +E
Sbjct: 61  ----------GGVKLADDADEAQALAEQILGMDI-------KGHTVHKVLVEAGSAIAQE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S L+DR +     I S +GGMDIEEVA   P+ + K+ I  L GV       +    
Sbjct: 104 FYFSFLLDRANRSFLSICSAEGGMDIEEVAATKPEAVAKVPISALTGVDRAKAREIAQAG 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L  QA     +L   L+  F D+D +L+E+NP+I+  +GR+  LD K++ DDNA +R  
Sbjct: 164 KLPEQALDGAAELIERLWAVFTDEDATLVEVNPMILTTDGRVMALDGKVTLDDNADFRQP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----A 292
           D   L D    D  E  AK+  L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 224 DHAALADEKTTDPLEARAKEKGLNYVKLDGTVGVIGNGAGLVMSTLDVVAYAGEEFGGQK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--- 349
           PANFLD+GGGA  + +A   +I+ SD SVK + +N+FGGI  CD +  GI++A K +   
Sbjct: 284 PANFLDIGGGASAEVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVTAYKLLAER 343

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDD 386
              ++ PLV+RL+G N ++G +++ ++GL  V     +D+
Sbjct: 344 GESVDRPLVVRLDGNNAELGRKILDDAGLPGVERVDTMDE 383


>gi|184201464|ref|YP_001855671.1| succinyl-CoA synthetase subunit beta [Kocuria rhizophila DC2201]
 gi|226734961|sp|B2GM49|SUCC_KOCRD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|183581694|dbj|BAG30165.1| succinyl-CoA synthetase beta chain [Kocuria rhizophila DC2201]
          Length = 389

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 138/403 (34%), Positives = 223/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G+V ++   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEKHGVPVLAGIVATTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + +      ++ILG  +        G  V+ V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTPEEAYEYAQQILGMDI-------KGHTVHRVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P  + ++ + P  G+T      + +  +  
Sbjct: 103 SVLLDRANRSYLAMCSVEGGMEIEQLAVERPDALARVDVSPADGITEAKAREIVEQAKFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L + +  +D +L+E+NPL+   +G +  LD K+S DDNA +RH +  
Sbjct: 163 AETAEKVIPVLVKLGEVYAKEDATLVEVNPLVKTGDGEILALDGKVSLDDNAAFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  D  E +AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELADKTTADPLEEKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDPQVKSVFVNVFGGITACDAVANGIVKALEILGDSATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA-AQKIVHAV 395
           P+V+RL+G NVD G  ++ E+   +IT  D  DA A K     
Sbjct: 343 PIVVRLDGNNVDEGRAILREANHPLITTADTMDAGADKAAELA 385


>gi|168699854|ref|ZP_02732131.1| succinyl-CoA synthetase (beta subunit) [Gemmata obscuriglobus UQM
           2246]
          Length = 403

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 169/404 (41%), Positives = 228/404 (56%), Gaps = 9/404 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRF 59
           M +HEYQAK LL      V K +V  +     +A   L  G   +VK+QIHAGGRG G+ 
Sbjct: 1   MKVHEYQAKELLAAAGANVPKHIVCKTPDEVAAAFDKLANGGGVMVKAQIHAGGRGAGQL 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
               AD  GGV+  +S +   +    +L   L T QTGP G  +  + V+  A+  +E Y
Sbjct: 61  VGY-ADKLGGVKFCASKEKARAVAETMLKHPLKTLQTGPDGQPIRTLIVQADAEPAQEFY 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           ++++ DR  G    +AS  GGMDIE+VA D P+ IFK+   P  G+           L L
Sbjct: 120 VAVVFDRAIGQPILMASAAGGMDIEKVAHDTPELIFKVPFAPETGLEPAQAKETAAKLGL 179

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+       +   L K +  KD +L E+NPL + K G + VLD+K  FDDNAL+RH D+
Sbjct: 180 AGEQAAKAEQIMLALSKVYLAKDATLAEVNPLAVTKAGDVVVLDAKFDFDDNALFRHPDV 239

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PAN 295
             LRD SEE+  EI A + NL++I LDG + C+VNGAGLAMATMDII  +G A    PAN
Sbjct: 240 AALRDESEENPAEIRAGKANLNFIQLDGTVACLVNGAGLAMATMDIINYHGKAHGVGPAN 299

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLDVGGG        AF+II SD  VKGIL+N+FGGI  C  +   ++ A KEV   +P+
Sbjct: 300 FLDVGGGVTAAGAVEAFRIILSDPKVKGILVNVFGGIASCATIADALVKAGKEVGFKVPV 359

Query: 356 VMRLEGANVDIGNRLIAESGLNVIT---AIDLDDAAQKIVHAVK 396
           V+RLEG  V+    ++  +   + T   A DL  AA+ +V   K
Sbjct: 360 VVRLEGNEVEKARGILTAAAAELPTLKAAPDLTSAAKLVVELSK 403


>gi|297526343|ref|YP_003668367.1| succinyl-CoA synthetase, beta subunit [Staphylothermus hellenicus
           DSM 12710]
 gi|297255259|gb|ADI31468.1| succinyl-CoA synthetase, beta subunit [Staphylothermus hellenicus
           DSM 12710]
          Length = 379

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/398 (35%), Positives = 220/398 (55%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++AK + R   VPV +G +  +   A +  + + G + V+K+Q+  G RG     
Sbjct: 1   MKLYEFEAKEIARNNGVPVPRGNIAKTPEEARTVAEKIGGEV-VLKAQVLVGRRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV   S+        RE+    +        G +   + VE+   I +E YL
Sbjct: 57  -------GGVLFASNPLEAEKVARELFNKRI-------RGEKAQLILVEEKICIDKEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL +DR++  + ++ S  GG++IEE+ K YP K+ ++ +DP+IG  S         L L 
Sbjct: 103 SLTIDRSNREIVYLVSPLGGVEIEELVKKYPNKLLRIRVDPMIGYKSYMSRLAAKFLGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  ++Y    + D  L+E NPL+   +  +  +D+KI+ DDN+LYRH +  
Sbjct: 163 KELWPSIHKIMNSMYNIMKNYDADLVEFNPLVKTCSNEIVAVDAKITIDDNSLYRHPEFA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E +   E    E  AK+   SY+ LDG++G M NGAGL MATMD++  YGG PANFLD+G
Sbjct: 223 E-KYGRELSKLEAIAKKLGFSYVELDGDVGIMCNGAGLTMATMDMVAYYGGRPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  A K++     VK +LINIFGGI RCD + +GI+ AV+E  +  P+V+RL 
Sbjct: 282 GGASRERVKEAAKLLLKHDKVKVLLINIFGGITRCDEVARGIIEAVEETGVKKPIVIRLL 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N +IG RL+ E G +V +  D  DA +K V   K +
Sbjct: 342 GTNEEIGRRLLEEKGYSVFSEAD--DAVKKAVEIAKNL 377


>gi|332242026|ref|XP_003270186.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Nomascus leucogenys]
          Length = 452

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 140/355 (39%), Positives = 205/355 (57%), Gaps = 3/355 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 101 LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 160

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  L TKQTG  G   N V V +     RE Y 
Sbjct: 161 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYF 217

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +   
Sbjct: 218 AIAMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFP 277

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I 
Sbjct: 278 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 337

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 338 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 397

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           GGA   +V  AFK+ITSD  V+  L      +++   +V     A  +VK  +P+
Sbjct: 398 GGATVHQVTEAFKLITSDKKVRAGLDTFLYHVVKLSEIVTLAKQAHVDVKFQLPI 452


>gi|145508425|ref|XP_001440162.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407368|emb|CAK72765.1| unnamed protein product [Paramecium tetraurelia]
          Length = 429

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 160/403 (39%), Positives = 243/403 (60%), Gaps = 10/403 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--------PGPLYVVKSQIHAG 52
           +++HEYQ     + + +P+  G +  +   A  A   +             VVK+Q+H G
Sbjct: 12  LSLHEYQTAEFFKSFQLPIPPGRICKTADEAYKAAARIIQEGSDKNSFTDVVVKAQVHTG 71

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE       G+ + S+ + V     ++LG+TLITKQTG  G +   VYV +  
Sbjct: 72  GRGKGYFKE--NGFNSGIHIASTPEDVREYASKMLGNTLITKQTGSLGKKCEMVYVVERN 129

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            + +ELYLS+L+DR +G +  +AS +GG+ IEE   +Y +K    + + +  + S    S
Sbjct: 130 FLRKELYLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPNAVEEIDSSIYES 189

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  + +L    +    ++  +++  F   D +LLEINPL I   G L + D K++ DDN+
Sbjct: 190 VSKVYKLNPIQQKQMTEILKHMFDIFLQTDATLLEINPLGIDLQGNLIICDQKLNIDDNS 249

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R   I  + DV ++D +E+EA++H L+YIALDGNIGCMVNGAGLAMATMD+IK Y G+
Sbjct: 250 QFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVNGAGLAMATMDLIKQYEGS 309

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGG A   ++ +A KI+  D +V+ IL+NIF GI RCD +V G+L  +  + + 
Sbjct: 310 PANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIARCDQIVLGLLKGLTVLGMK 369

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            P+V+R++G  V+   +LI ESG N++   DLD+AA+K V   
Sbjct: 370 KPMVLRMKGTKVEEAKKLIEESGFNMMFTEDLDEAAKKAVRMA 412


>gi|240172866|ref|ZP_04751525.1| succinyl-CoA synthetase subunit beta [Mycobacterium kansasii ATCC
           12478]
          Length = 387

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 144/403 (35%), Positives = 223/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  S   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDSAEGAKAIATEIGRPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++        + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYQHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGMDIEEVA   P ++ K+ +D + GV S    S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMDIEEVAATKPDRLAKVPVDAVTGVDSAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   +G++  LD+KI+ D NA +RH D  
Sbjct: 163 AEVLDAAAVTISKLWELFVAEDATLVEVNPLVRTPDGQILALDAKITLDANADFRHPDHG 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDEDVKSVFVNVFGGITSCDAVATGIVKALEILGGEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++AE+   ++T    +D+AA K     
Sbjct: 343 PLVVRLDGNNVDEGRRILAEANHPLVTLVPTMDEAADKAAELA 385


>gi|300742290|ref|ZP_07072311.1| succinyl-CoA synthetase, beta subunit [Rothia dentocariosa M567]
 gi|311112207|ref|YP_003983429.1| succinyl-CoA ligase subunit beta [Rothia dentocariosa ATCC 17931]
 gi|300381475|gb|EFJ78037.1| succinyl-CoA synthetase, beta subunit [Rothia dentocariosa M567]
 gi|310943701|gb|ADP39995.1| succinyl-CoA ligase subunit beta [Rothia dentocariosa ATCC 17931]
          Length = 388

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/403 (35%), Positives = 228/403 (56%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV KG+V ++   A++A + + G L V+K+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLKGIVATTPEEAKAAAEEIGG-LTVIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +        ++ILG  +        G  V+ V V  GADI  E Y 
Sbjct: 57  -------GGVKLAKNPDEAYEYAQQILGMDI-------KGHTVHRVLVAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + K+ +DPL+G+ S     + +     
Sbjct: 103 SILLDRANRSYLAMCSVEGGMEIEQLAAERPEALAKVEVDPLVGIDSAKAQEIVEAAGFS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +    ++   L   F  +D +L+E+NPL+    G +  LD K+S DDNA +R  D  
Sbjct: 163 AELQPKVVEVLVKLGDVFNKEDATLVEVNPLVQTPEGDILALDGKVSLDDNAEFRQPDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D S E+  E +AKQH+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDKSAENPLEAKAKQHDLNYVKLDGEVGVVGNGAGLVMSTLDVVAYAGEKHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA  +II  D  VK + +N+FGGI  CD + +GI+ A++ +      
Sbjct: 283 FLDIGGGASAEVMAAGLEIILGDEQVKSVFVNVFGGITSCDAVAEGIVKALEILGDSATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R+++E+    V+ A  +D  A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILSEANHPLVVQATTMDSGADKAAELA 385


>gi|171185915|ref|YP_001794834.1| succinyl-CoA synthetase subunit beta [Thermoproteus neutrophilus
           V24Sta]
 gi|170935127|gb|ACB40388.1| succinyl-CoA synthetase, beta subunit [Thermoproteus neutrophilus
           V24Sta]
          Length = 379

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 136/397 (34%), Positives = 217/397 (54%), Gaps = 24/397 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HEY+AK LL KY V +  G +  +   A  A K +  P+ V+K+Q+   GRGK       
Sbjct: 2   HEYEAKELLAKYGVEIPPGRLALTPDEALKAAKEIGTPV-VLKAQVVVAGRGKA------ 54

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               GG++V  + +      + + G  +        G  V  +YV    +  RE+YLSL+
Sbjct: 55  ----GGIKVAKTPEEAYELSKAMFGMNI-------KGLVVRKIYVTKYVEAEREMYLSLI 103

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG-- 181
           +DR S    F+AS  GG+DIEE+AK  P+KI ++ +DP +G+    +  +   L  +   
Sbjct: 104 IDRASRRYLFLASPVGGVDIEEIAKASPEKIKRVYVDPAVGLREFHIRQIGLWLGFRPGT 163

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +       +   +Y+   + D  L+E NPL + K+G +  LD+++  DDNALYRH D+++
Sbjct: 164 RQWQQISSIVQAMYRVMVEYDAELVESNPLALTKDGDVIPLDARVIVDDNALYRHSDLEK 223

Query: 242 --LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
               D  +    E  AK+    Y+ LDG+IG + NGAGL M+TMD++  +GG PANFLD+
Sbjct: 224 ALEEDPRDVTEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMSTMDLVYHFGGRPANFLDI 283

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++ V  A K++     V+ + INIFGGI R D +  G+  A+ E      +V+RL
Sbjct: 284 GGGASREVVREAVKVLLKHPRVRVVFINIFGGITRADEVALGVKDALAETGATKKIVVRL 343

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +G N + G  +++E G+ +    + ++AAQ+ V   +
Sbjct: 344 KGTNEEQGRAILSEVGVPLF--ENAEEAAQRAVELAR 378


>gi|145529946|ref|XP_001450756.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418378|emb|CAK83359.1| unnamed protein product [Paramecium tetraurelia]
          Length = 429

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 160/403 (39%), Positives = 239/403 (59%), Gaps = 10/403 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--------PGPLYVVKSQIHAG 52
           +++HEYQ     + + +P+  G +  +   A  A   +             VVK+Q H G
Sbjct: 12  LSLHEYQTAEFFKSFQLPIPPGKICKTPDEAYKAAIKIIQEGSERNSFTDLVVKAQCHTG 71

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE       G+ + S+ + V     ++LG+TLITKQTG  G +   VYV +  
Sbjct: 72  GRGKGYFKE--NGFNSGIHIVSNPEDVKEYASKMLGNTLITKQTGSLGKKCEMVYVVERN 129

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            + +ELYLS+L+DR +G +  +AS +GG+ IEE   +Y +K    + + +  +      +
Sbjct: 130 FLRKELYLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPNNVDEIDFSIYEN 189

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  + +L         D+   ++  F   D +LLEINPL I   G L + D K++ DDN+
Sbjct: 190 VSKVYKLNPIQHNQMKDILKKMFDIFLQTDATLLEINPLGIDLQGNLIICDQKLNIDDNS 249

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R   I  + DV ++D +E+EA++H L+YIALDGNIGCMVNGAGLAMATMD+IK Y G+
Sbjct: 250 QFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVNGAGLAMATMDLIKQYEGS 309

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGG A   ++ +A KI+  D +V+ IL+NIF GI RCD +V G+L  +  + + 
Sbjct: 310 PANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIARCDQIVLGLLKGLTVLGMK 369

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            P+V+R++G  V+   +LI ESG N+I   DLD+AA+K V   
Sbjct: 370 KPMVLRMKGTKVEEAKKLIDESGFNMIFTEDLDEAAKKAVRMA 412


>gi|329728951|gb|EGG65365.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 308

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 155/318 (48%), Positives = 205/318 (64%), Gaps = 10/318 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K + R   V V +G V  +   A    K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL  V +  +E+LG TL+T QTGP G  +  +Y+E+G  I +E Y+
Sbjct: 58  -------GGVKIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +   + + 
Sbjct: 111 GFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+RH D+ 
Sbjct: 171 KESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVV 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PANFLD G
Sbjct: 231 ELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAG 290

Query: 301 GGADQDKVAAAFKIITSD 318
           G A ++KV  AFKII  D
Sbjct: 291 GSATREKVTEAFKIILGD 308


>gi|145520645|ref|XP_001446178.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413655|emb|CAK78781.1| unnamed protein product [Paramecium tetraurelia]
          Length = 429

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 158/403 (39%), Positives = 237/403 (58%), Gaps = 10/403 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--------PGPLYVVKSQIHAG 52
           +++HEYQ     + + +P+  G +  +   A  + + +             VVK+Q H G
Sbjct: 12  LSLHEYQTAEFFKSFQLPIPPGRICKTPDEAYKSAQKIIQEGSERNSFTDVVVKAQCHTG 71

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GRGKG FKE       G+ + S+   V     ++LG+TLITKQTG  G +   VYV +  
Sbjct: 72  GRGKGYFKE--NGFNSGIHIASTPDDVKEYASKMLGNTLITKQTGSLGKKCEMVYVVERN 129

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
            + +ELYLS+L+DR +G +  +AS +GG+ IEE   +Y +K    +   +  +       
Sbjct: 130 FLRKELYLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPSNVDDIDFSIYEK 189

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  + +L         D+   ++  F   D +LLEINPL I   G L + D K++ DDN+
Sbjct: 190 VSKVYKLNPIQHNQMKDILKKMFDIFLQTDATLLEINPLGIDLQGNLIICDQKLNIDDNS 249

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R   I  + DV ++D +E+EA++H L+YIALDGNIGCMVNGAGLAMATMD+IK Y G+
Sbjct: 250 QFRQHAIFHMEDVRQKDWKEVEAQKHGLNYIALDGNIGCMVNGAGLAMATMDLIKQYDGS 309

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGG A   ++ +A KI+  D +V+ IL+NIF GI RCD +V G+L  +  + + 
Sbjct: 310 PANFLDVGGKATDQEIVSALKIMDKDPNVEAILVNIFAGIARCDQIVLGLLKGLTVLGMK 369

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            P+V+R++G  +D   +LI ESG N++   DLD+AA+K V   
Sbjct: 370 KPMVLRMKGTKIDEAKKLIEESGFNMMFTEDLDEAAKKAVRMA 412


>gi|327310444|ref|YP_004337341.1| succinyl-CoA synthetase subunit beta [Thermoproteus uzoniensis
           768-20]
 gi|326946923|gb|AEA12029.1| Succinyl-CoA synthetase, subunit beta [Thermoproteus uzoniensis
           768-20]
          Length = 382

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/401 (33%), Positives = 230/401 (57%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+AK +L KY V + +G +  +        + +  P+ V+K+Q+   GRGK    
Sbjct: 1   MKLYEYEAKEILAKYGVKIPRGRLALTPEEVRKIAEEIGKPV-VLKAQVTVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  + +   +  R++ G T+        G  V  +YV +  ++ RE+YL
Sbjct: 57  -------GGIKVAKTPEEAEALARQMFGMTI-------KGLVVKKIYVTEYQEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR +    F+AS  GG+DIEE+AK  P+KI ++ +DP  G+    V ++   L ++
Sbjct: 103 SLIIDRATRRYLFLASPVGGIDIEEIAKKEPEKIKRVYVDPFEGLRDFHVRAIVSWLAIK 162

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                      +   +Y+A  + +  L+E NPL + K G +  LD++I  DDN+L++H D
Sbjct: 163 PGTPQWDQAASIVRAMYRAMTELEAELVESNPLAVTKTGEVVPLDARIIVDDNSLFKHPD 222

Query: 239 IQELRDVSEEDSREIE--AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++  +    D  E E  A++   +Y+ LDG++G + NGAGL M+TMD++  +GG PANF
Sbjct: 223 LEKAYEEDPRDVTEFERYAQKIGFNYVELDGDVGIIGNGAGLTMSTMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPL 355
           LD+GGGA +D V  A K++     VK I INIFGGI R D +  GI +A+ E    N  +
Sbjct: 283 LDIGGGASRDVVKEALKVLLRHPRVKSIFINIFGGITRADEVAAGIEAALAETGGTNKKI 342

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           ++R++G N ++G +++A+ G+ +    + ++AAQK V A +
Sbjct: 343 IVRMKGTNEELGRQMLAKLGIPLY--ENAEEAAQKAVEAAR 381


>gi|313125863|ref|YP_004036133.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Halogeometricum
           borinquense DSM 11551]
 gi|312292228|gb|ADQ66688.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Halogeometricum
           borinquense DSM 11551]
          Length = 381

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/397 (34%), Positives = 212/397 (53%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +  +PV +  + +SV     A++ +  P   +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKDIFAEAGIPVPESRLATSVDEVMEAVEEIGYP-AAIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +          +ILG  L        G  V  V VE G D   ELY+
Sbjct: 57  -------GGIKIATDEDEAREAAEDILGMDL-------KGYTVEKVLVEAGVDFENELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P+ I +  IDP  G+       +     + 
Sbjct: 103 GITMDRGEGKPVAMVSTEGGVNIEEVAEETPEAIAREHIDPAFGLHPYQARKVVYEAGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY  +  KD S +EINP++I  +  +   D+ ++ D +AL+RH D+ 
Sbjct: 163 HDVAGDVATILSTLYDLYESKDASDIEINPVMITSDREVVAADAVMNIDSDALFRHPDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ D + ED  E +A  +   Y+ L GN+G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMEDEAAEDDLERKANDYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++VA A  ++ SD +V  ++ NIFGGI R D + KGI  A++   +I   +V+RL
Sbjct: 283 GGAKAERVANALDMVFSDENVDAVVFNIFGGITRGDEVAKGINEALESFDEIPKKVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G  ++    + V     L+DA Q+ V   +
Sbjct: 343 AGTNAEEGMEILNTDLVEVEK--TLEDAVQQAVENAQ 377


>gi|227498128|ref|ZP_03928301.1| succinyl-CoA synthetase subunit beta [Actinomyces urogenitalis DSM
           15434]
 gi|226832464|gb|EEH64847.1| succinyl-CoA synthetase subunit beta [Actinomyces urogenitalis DSM
           15434]
          Length = 406

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/405 (34%), Positives = 225/405 (55%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L  K+ VPV  G + ++   AE     L      L VVK+Q+  GGRGK 
Sbjct: 4   MDLYEYQARELFAKHGVPVLGGQIATTPEQAEQVATELLNCGTDLLVVKAQVKTGGRGKA 63

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S          ILG  +        G  V  V + +GADI  E
Sbjct: 64  ----------GGVKLARSAAEARQHAEAILGMEI-------KGHTVRTVLISEGADIDSE 106

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR       + S +GGM+IE +AK+ P+ + ++ +DP+ G+T E  A +    
Sbjct: 107 FYFSILLDRAERRYLAMCSREGGMEIETLAKERPEALARVAVDPIEGITPEVAARITAEA 166

Query: 178 EL-QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
               G        +   L++ F  +D +L+E+NPL++  +G +  LD K+S DDNA +RH
Sbjct: 167 GFEPGAVADAVAQVIGRLWEVFTAEDATLVEVNPLVLTPSGTVLALDGKVSLDDNASFRH 226

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK-----LYGG 291
            +   L+D S  D  E  AK+  L+Y+ L G +G + NGAGL M+T+D++        G 
Sbjct: 227 PEHAALKDTSAADPLETRAKEAGLNYVRLTGEVGVLGNGAGLVMSTLDVVAGAGERHGGM 286

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK- 350
            PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  CD +  GI++AV  ++ 
Sbjct: 287 RPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITSCDTVANGIVTAVSTLED 346

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            + P+V+RL+G N  +G +++AE+ ++ +T +D  D A  +V A+
Sbjct: 347 FDKPIVVRLDGNNAALGRQILAEAAIDGVTVVDTMDGAADVVTAL 391


>gi|126642749|ref|YP_001085733.1| succinyl-CoA synthetase beta chain [Acinetobacter baumannii ATCC
           17978]
          Length = 344

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 247/352 (70%), Gaps = 11/352 (3%)

Query: 46  KSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC 105
           K+Q+HAGGRGK           GGV+V  S + VI     I+G+ L+T QT   G  VN 
Sbjct: 2   KAQVHAGGRGKA----------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNS 51

Query: 106 VYVEDGA-DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG 164
           + V +    + RELYL  +VDR+S  + F+AST+GG++IE+VA++ P+KI K+ +DPL+G
Sbjct: 52  IIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVG 111

Query: 165 VTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +       +   L L+ +       +    Y+AF + D +L EINPL + +NG +  +D+
Sbjct: 112 LQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDA 171

Query: 225 KISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD 284
           K+  D NALYR   +  LRD S+E+ RE++A + +L+Y+AL+GNIGCMVNGAGLAMATMD
Sbjct: 172 KVGIDSNALYRLPKVAALRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMD 231

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
           IIKLYGG PANFLDVGGGA +++V  AFKII +D+SV+G+LINIFGGI+RCD++ + I++
Sbjct: 232 IIKLYGGQPANFLDVGGGATKERVIEAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIA 291

Query: 345 AVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           AV+EV + +P+V+RLEG N ++G +L+ ESGL +I+A  L DAA+K+V AVK
Sbjct: 292 AVQEVNVTVPVVVRLEGNNAELGAKLLDESGLKLISANGLSDAAEKVVAAVK 343


>gi|126465378|ref|YP_001040487.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Staphylothermus
           marinus F1]
 gi|189030221|sp|A3DLR9|SUCC_STAMF RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|126014201|gb|ABN69579.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Staphylothermus
           marinus F1]
          Length = 379

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 21/398 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++AK + +   +PV +G +  +   A    + + G + V+K+Q+  G RG     
Sbjct: 1   MKLYEFEAKEIAKNNGIPVPRGGIAKTPEEARIVAEKIGGEV-VLKAQVLVGRRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV   S+        RE+    +        G +V  + VE+   I +E YL
Sbjct: 57  -------GGVLFASNSLEAEKVARELFSKRV-------RGEKVELILVEEKICIDKEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL +DR++  + ++ S  GG++IEE+ K YP K+ ++ +DP+IG            L L 
Sbjct: 103 SLTIDRSNREIVYLVSPLGGVEIEELVKKYPDKLLRIRVDPVIGYKPYMSRLAAKFLGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +  ++Y    + D  L+E NPL+   +  +  +D+KI+ DDN+LYRH++  
Sbjct: 163 KELWPSMHKIMNSMYNIMKNYDADLVEFNPLVKTCSNEIVAVDAKITIDDNSLYRHIEFA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E +   E    E  AK+   SY+ LDG+IG M NGAGL MATMD++  YGG PANFLD+G
Sbjct: 223 E-KYGRELSEMEAIAKKLGFSYVELDGDIGIMCNGAGLTMATMDMVAYYGGRPANFLDIG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  A K++     VK +L+NIFGGI RC+ + +GI+ AV+E  +  P+V+RL 
Sbjct: 282 GGASRERVREAAKLLLKHDKVKVLLVNIFGGITRCNEVARGIIEAVEETGVKKPIVIRLL 341

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N +IG RL+ E G +V +  D  DA +K V   K +
Sbjct: 342 GTNEEIGRRLLEEKGYSVFSEAD--DAVKKAVEIAKNL 377


>gi|156936881|ref|YP_001434677.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ignicoccus
           hospitalis KIN4/I]
 gi|189030247|sp|A8A8L8|SUCC_IGNH4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|156565865|gb|ABU81270.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ignicoccus
           hospitalis KIN4/I]
          Length = 376

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/396 (36%), Positives = 222/396 (56%), Gaps = 22/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EY+AKA+ +KY +P  +GV+I        A++ L  P+ V+K+Q+   GRGK    
Sbjct: 1   MNLLEYEAKAIAKKYGIPTPEGVLIERPEQVNEAVEKLGLPV-VLKAQVPVAGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++       +    E+    +        G  V  + VE   +I +ELYL
Sbjct: 57  -------GGVKLARDPDEALELAEELFSKEI-------KGFPVLSLLVEKAENIQKELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DRT+  V  +AS +GGM+IEE+AK+ P  I KL I+P +G+ + +   +   + L 
Sbjct: 103 SFTIDRTNRKVVMLASAEGGMEIEELAKEKPDAIVKLPIEPEVGLKAHEAREVGKRIGLS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           GQ       +   +YK F D D  L+E NPL I   G L  LD ++  DDNA++RH +++
Sbjct: 163 GQLLRQFEGIAKTMYKIFEDYDAELVESNPLAITDRG-LVALDFRMIVDDNAIFRHPELE 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             R+  E    E EA +    Y+ LDG+IG + NGAGL MATMD++  YGG PANFLD+G
Sbjct: 222 ASRE-RELSELEKEAARWGFFYVELDGDIGIIGNGAGLTMATMDVVNYYGGRPANFLDIG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D+V AA  ++  +  VK I +NIFGGI     + +GI+ A+ E  +  P+V R+ 
Sbjct: 281 GGARRDRVKAAVNVLLKNPKVKVIFVNIFGGITLASEVAQGIVDALSESNVKKPIVARIV 340

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G   + G +++ E+G+ +     +D+AAQ+ V   K
Sbjct: 341 GTAEEEGKKILKEAGIPLF--ESMDEAAQEAVKLAK 374


>gi|239916964|ref|YP_002956522.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Micrococcus
           luteus NCTC 2665]
 gi|281414578|ref|ZP_06246320.1| succinyl-CoA synthetase subunit beta [Micrococcus luteus NCTC 2665]
 gi|259511786|sp|C5C916|SUCC_MICLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|239838171|gb|ACS29968.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Micrococcus
           luteus NCTC 2665]
          Length = 389

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 223/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEAHGVPVLAGIVAQTPDEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +        + ILG  +        G  V+ V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEAYEHAKAILGMDI-------KGHTVHQVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A++ P+ + K+ +  L G+ +E    +       
Sbjct: 103 SVLLDRANRTYLAMCSVEGGMEIEQLAEERPEALAKVPVSALTGIDAETAQKIVAEAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R D  ++   L++ F  +D +L+E+NPL+   +G++  LD K+S DDNA +R     
Sbjct: 163 EELRADVAEVIQKLWEVFEKEDATLVEVNPLVKTGDGKILALDGKVSLDDNAEFRQEGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D   ED  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDERTEDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA+ + +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 283 FLDIGGGANAEVMANGLDVILGDEQVKSVFVNVFGGITACDAVANGIVKALEILGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G R++ E+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNAVEEGRRILQEANHPLVTLAATMDEGADKAAELA 385


>gi|183984520|ref|YP_001852811.1| succinyl-CoA synthetase (beta chain) SucC [Mycobacterium marinum M]
 gi|226734964|sp|B2HED1|SUCC_MYCMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|183177846|gb|ACC42956.1| succinyl-CoA synthetase (beta chain) SucC [Mycobacterium marinum M]
          Length = 387

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 216/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A +    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++          ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYEHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P ++ K+ +D   GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L+  F  +D +L+E+NPL+   + ++  LD K++ D NA +RH D  
Sbjct: 163 AEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ ++   ++T    +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADKAAELA 385


>gi|83768774|dbj|BAE58911.1| unnamed protein product [Aspergillus oryzae]
          Length = 389

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 153/395 (38%), Positives = 229/395 (57%), Gaps = 13/395 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +NI ++ +  LL+++ +PV +G V+ S  AA   +  +  P  V+K+QI AGGRGKG   
Sbjct: 3   LNIAQHHSHNLLKQFQIPVPEGFVVKSPEAARDVVYNIGAP-SVMKAQILAGGRGKG--- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +  +D KGGVR+  S      +   ++G +L+TKQT P G  VN +Y+    DI +E Y+
Sbjct: 59  KYNSDGKGGVRIVDSPDEAFENASNMIGYSLVTKQTPPDGLPVNKLYIYKSVDIAQEFYV 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++  DR       + S  GG++IE        ++ +   +   G+T E  A +       
Sbjct: 119 AITFDRARYKPVLLMSDDGGVNIES----NVNQLQRFWFNLSTGITPEIAAYIEAQFGFS 174

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   L K F +KD +LLE+NP +    G L  +D+K +FDD+A +R  ++ 
Sbjct: 175 DDDMGMVTHILRQLVKLFREKDATLLELNPFVRTTEGSLICIDAKFNFDDSAKFRQPELV 234

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + S E+  E EA Q  LSYI LDGNIG +VNGAGLAMAT D++ LYGG  ANFLD+G
Sbjct: 235 SLVEHSAEEKDEYEASQLGLSYIRLDGNIGVIVNGAGLAMATNDLVTLYGGNCANFLDIG 294

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA ++ ++ AF I+  DS  K + INI+GGI+RCD++ + IL+A   +   +IP+V+RL
Sbjct: 295 GGATKETLSKAFSILQGDSRTKALFINIYGGIVRCDMIAESILAASAAMGGFSIPVVVRL 354

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           +G N + G +L    G N+I   D D AA+KIV  
Sbjct: 355 QGTNYEKGFKL----GNNIILEADFDAAAKKIVEL 385


>gi|41033569|emb|CAF18451.1| succinyl-CoA synthetase beta subunit [Thermoproteus tenax]
          Length = 387

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/401 (34%), Positives = 225/401 (56%), Gaps = 25/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+AK +  KY V +  G +  S        + +  P+ V+K+Q+   GRGK    
Sbjct: 6   MKLYEYEAKEIFAKYGVKIPPGKLALSPQEVRKIAEEIGKPV-VLKAQVTVAGRGKA--- 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++V  S +      +++ G  +        G  V  +YV +  ++ RE+YL
Sbjct: 62  -------GGIKVAKSPQEAEELAKQMFGMNI-------KGLTVRKIYVTEYVEVEREMYL 107

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL++DR S    F+AS  GG+DIEE+AK  P+KI ++ +DP  G+    +  +   L ++
Sbjct: 108 SLIIDRASRRYLFLASPIGGVDIEEIAKREPEKIKRVYVDPFEGLKDFHIRGIVSWLGVK 167

Query: 181 G--QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              Q       +   +YKA  + +  L+E NPL + K+G +  LD++I  DDNALY+H D
Sbjct: 168 AGTQQWEQAAGIVKAMYKAMTELEAELVESNPLAVTKSGDVIPLDARIIIDDNALYKHPD 227

Query: 239 IQELRDVSEEDSREIE--AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
           +++  +    D  E E  A++   +Y+ LDG+IG + NGAGL M+TMD++  YGG PANF
Sbjct: 228 LEKAYEEDPRDVTEFERYAQRIGFNYVELDGDIGIIGNGAGLTMSTMDLVYHYGGRPANF 287

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPL 355
           LD+GGGA ++ V  A K++     VK I INIFGGI R D +  G+  A+ E+      +
Sbjct: 288 LDIGGGASREVVKEALKVLLRHPRVKVIFINIFGGITRADEVAAGVEGALNELGNAGKKI 347

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           ++R++G N ++G +++A+ G+ +  +   ++AAQK V   +
Sbjct: 348 IVRMKGTNEELGRQMLAKIGVPLYESA--EEAAQKAVELAR 386


>gi|296268640|ref|YP_003651272.1| succinyl-CoA synthetase subunit beta [Thermobispora bispora DSM
           43833]
 gi|296091427|gb|ADG87379.1| succinyl-CoA synthetase, beta subunit [Thermobispora bispora DSM
           43833]
          Length = 393

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 149/398 (37%), Positives = 226/398 (56%), Gaps = 30/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QAK L  +Y +PV +G+V  +   A +A +TL G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQAKELFAEYGIPVPRGIVAHTAEEARAAAETLTGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++           ++ILG  +        G  V  V VE+ + I  E Y 
Sbjct: 57  -------GGVKLADGPDDAYEKAQQILGMDI-------KGHTVRKVLVEEASQIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     I S  GGMDIEEVA+  P+K+ K+ IDPL GV       +     L 
Sbjct: 103 SFLLDRANRTFLSICSAAGGMDIEEVARQTPEKVAKVPIDPLTGVDRAKAREIAIAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A     D+   L+  F D+D +L+E+NP+I+  +G +R +D K++ DDNAL+R  D Q
Sbjct: 163 ERALDGAVDIIEKLWAVFVDEDATLVEVNPMILTVDGAVRAIDGKVTLDDNALFRQPDHQ 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
           +  D + ED  E  AK+ +L+Y+ LDG++G + NGAGL M+T+D++   G        PA
Sbjct: 223 KYVDKAAEDPLEARAKELDLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGESFPGQPKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II SD SVK + +N+FGGI  CD +  GI+SA K ++    
Sbjct: 283 NFLDIGGGASAEVMANGLQIILSDPSVKSVFVNVFGGITACDAVANGIVSAFKLLESRGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDD 386
            +  PLV+RL+G N  +G +++ ++ L  V     +D+
Sbjct: 343 AVTRPLVVRLDGNNAALGRKILTDAALPGVELVDTMDE 380


>gi|41406994|ref|NP_959830.1| succinyl-CoA synthetase subunit beta [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395345|gb|AAS03213.1| SucC [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 406

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 139/403 (34%), Positives = 216/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ V K+Q+  GGRGK    
Sbjct: 20  MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGRPVMV-KAQVKTGGRGKA--- 75

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 76  -------GGVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYI 121

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 122 SFLLDRANRTYLAMCSVEGGMEIEEVAATEPERLAKVPVDAVTGVDLATARSIAEKGHLP 181

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 182 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPDNQILALDGKVTLDANADFRQPGHA 241

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+H+L+Y+ LDG +G + NGAGLAM+T+D++   G       PAN
Sbjct: 242 AFEDRDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAYAGEKHGGVKPAN 301

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 302 FLDIGGGASAEVMAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 361

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++AE+    VI A  +D  A K     
Sbjct: 362 PLVVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADKAAELA 404


>gi|222480617|ref|YP_002566854.1| succinyl-CoA synthetase, beta subunit [Halorubrum lacusprofundi
           ATCC 49239]
 gi|254778441|sp|B9LRR0|SUCC_HALLT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|222453519|gb|ACM57784.1| succinyl-CoA synthetase, beta subunit [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 381

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 132/399 (33%), Positives = 215/399 (53%), Gaps = 21/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HE+QAK +     +PV    + ++V  A  A+  +  P   +K+Q+H GGRGK    
Sbjct: 1   MKLHEHQAKTIFADAGIPVPDSRLATTVDEALDAVDEIGYP-AAIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +          EILG  L        G  V+ + VE G D + ELY+
Sbjct: 57  -------GGIKIATDRDEAEQYAEEILGMDL-------KGYTVDQILVEQGVDFVDELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  +DP  G+       +     + 
Sbjct: 103 GVTMDRGEGQPVLMVSTEGGVNIEEVAEENPDAIAREHVDPAFGLHPYQARKVVYEAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +D   +   LY  + + D S +E+NP++I  +  +   D+ ++ D++AL+RH D+ 
Sbjct: 163 ADVALDVASILTTLYDLYEENDASEIEVNPVMITSDRDVIAADAVMNIDEDALFRHPDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + S ED  E +A ++   Y+ L GN+G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMAEESYEDDLERKAGEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYYGGKPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++V  A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I   +V+RL
Sbjct: 283 GGAKAERVTKALDMVFSDENVDAVVFNIFGGITRGDEVAKGINEALEQFDEIPKKVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            G N + G  ++    + V     L+DA Q+ V   + V
Sbjct: 343 AGTNAEEGMEILNTDLVEVE--ETLEDAVQRAVKNAEEV 379


>gi|269796097|ref|YP_003315552.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Sanguibacter
           keddieii DSM 10542]
 gi|269098282|gb|ACZ22718.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sanguibacter
           keddieii DSM 10542]
          Length = 390

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/403 (34%), Positives = 224/403 (55%), Gaps = 25/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  GVV ++   A S  + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGVVATTPEEARSGAEELGGGTVVVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +     +   EILG  +        G  V+ V +  GA I  E Y 
Sbjct: 58  -------GGVKLAHTPDEAAARAEEILGMDI-------KGHTVHRVMIAAGAKIAEEFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     +AS +GGM+IE++A + P+ + K+ +DP++G+       + +     
Sbjct: 104 SVLLDRANRSYLAMASVEGGMEIEQLAVERPEALAKVAVDPIVGIDEAKAVEIAEAAGFA 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    D F  L+  + ++D +L+E+NPL+  ++G +  LD K++ D+NA +RH +  
Sbjct: 164 DDIKAQVVDAFQKLWTVYKEEDATLVEVNPLVRTEDGSIVALDGKVTLDENAGFRHAEHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           +L D +  D  E +AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 224 DLEDKAAADPLEAKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+K +      
Sbjct: 284 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALKVLGDAATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G  ++ E+   ++T A  +D  A K     
Sbjct: 344 PLVVRLDGNNVEEGRAILIEAAHPLVTLADTMDGGADKAAELA 386


>gi|72162976|ref|YP_290633.1| succinyl-CoA synthetase subunit beta [Thermobifida fusca YX]
 gi|71916708|gb|AAZ56610.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermobifida
           fusca YX]
          Length = 410

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/399 (36%), Positives = 223/399 (55%), Gaps = 31/399 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGR 58
           ++ EYQAKAL  +Y VPV +G V S+     +  +       P  VVK+Q+  GGRGK  
Sbjct: 19  DLFEYQAKALFAEYGVPVPQGKVASTPEEVRAIAEEFAAAGKPRVVVKAQVKTGGRGKA- 77

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV+V       ++  ++ILG  +        G  V+ V VE+ +DI  E 
Sbjct: 78  ---------GGVKVADGPDDAVAKAKQILGMDI-------KGHTVHRVLVEEASDIAEEY 121

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S L+DR +     I S +GGM+IEEVA   P  + K+ I PL G  ++  A +    +
Sbjct: 122 YFSFLLDRANRSFLSICSAEGGMEIEEVAATNPDAVAKVPISPLKGAPADVAADIVAQGK 181

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L   A     D+   L+K F +KD +L+E+NPLI+ K+GR+  LD K++ DDNA +R  D
Sbjct: 182 LPEAAAQGAVDVITKLWKVFVEKDATLVEVNPLILTKDGRVVALDGKVTLDDNAEFRQ-D 240

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----AP 293
           ++ L   +E D  E++AK+  L+Y+ LDG +G + NGAGL M+T+D++   G       P
Sbjct: 241 LESLASAAEGDPLEVKAKEKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEQHGGVKP 300

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--- 350
           ANFLD+GGGA  + +A   +II SD +VK + +N+FGGI  CD +  GI+ A++ ++   
Sbjct: 301 ANFLDIGGGASAEVMANGLEIILSDPAVKSVFVNVFGGITACDAVANGIVQALELLESRG 360

Query: 351 --INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
             +  PLV+RL+G N ++G  ++ E     +  +D  D 
Sbjct: 361 EDVTKPLVVRLDGNNAELGRSILNERNHPAVRQVDTMDG 399


>gi|328906125|gb|EGG25900.1| succinate-CoA ligase, beta subunit [Propionibacterium sp. P08]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 215/404 (53%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +GVV  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGVVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V + +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPQEAAEHAKAILGMDI-------KGHTVHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ G+       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGIDDAKAREILTQAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 ESEQDAIAPAVIKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 ALVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +A    +I SD  V  + +N+FGGI  CD +  GI  A++++  K  
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDGQVHSVFVNVFGGITACDQVALGIKGALEKLGDKAT 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G  ++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRTILEEFNHPLVTMVPTMDEAASKAAELA 387


>gi|313835932|gb|EFS73646.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL037PA2]
 gi|314927225|gb|EFS91056.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL044PA1]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 215/404 (53%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +GVV  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGVVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V + +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPQEAAEHAKAILGMDI-------KGHTVHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ G+       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGIDDAKAREILTQAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 ESEQDAIAPAVIKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 ALVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +A    +I SD  V  + +N+FGGI  CD +  GI  A++++  K  
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVHSVFVNVFGGITACDQVALGIKGALEKLGDKAT 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G  ++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRTILEEFNHPLVTMVPTMDEAASKAAELA 387


>gi|229047523|ref|ZP_04193113.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
 gi|228723770|gb|EEL75125.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
          Length = 310

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 158/314 (50%), Positives = 204/314 (64%), Gaps = 10/314 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFKI 314
           GGA  +K+    K+
Sbjct: 291 GGATAEKLQKHSKL 304


>gi|227833887|ref|YP_002835594.1| succinyl-CoA synthetase beta subunit [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262184893|ref|ZP_06044314.1| succinyl-CoA synthetase subunit beta [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227454903|gb|ACP33656.1| succinyl-CoA synthetase beta subunit [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 394

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/395 (35%), Positives = 217/395 (54%), Gaps = 27/395 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +++EYQA+ L   + VP  KG+V +S   AE A   L  P+ VVK+QI  GGRGK     
Sbjct: 6   DLYEYQARDLFEAHGVPTLKGIVATSAVQAEEAAAKLGTPVVVVKAQIKTGGRGKA---- 61

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  S         EILG  +        G  V  V V +GADI  E Y S
Sbjct: 62  ------GGVKLAHSPAEAAEKANEILGLKI-------KGHTVRKVMVAEGADIAAEYYFS 108

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DRT      + S +GG++IE++A++ P  + K    PL G+T      +        
Sbjct: 109 ILLDRTKRRYLAMLSKEGGVEIEKLAEERPDALIKRSFSPLDGMTDTLARDMAYEAGFDE 168

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
                   +F  LY  + ++D +L+E+NPL+   +G +  LD KI+ DDNA +RH + ++
Sbjct: 169 GDVAKLVPVFKKLYTVYTEEDATLVEVNPLVKTSSGEIIALDGKITLDDNAQFRHPEHRD 228

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APAN 295
           L+D    D  E++A++  L+Y+ LDG++G + NGAGL M+T+D++   G        PAN
Sbjct: 229 LQDHGATDPLELKAQKMGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEDLSSQPKPAN 288

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK----EVKI 351
           FLD+GGGA+ + +A   ++I SD  VK + +N+FGGI  CD + KGI+ A K    E   
Sbjct: 289 FLDIGGGANAEVMANGLEVILSDPQVKAVFVNVFGGITACDEVAKGIVQAYKILDSEGIE 348

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
             PLV+RL+G N ++G  ++ ++ L  +  ++  D
Sbjct: 349 PKPLVVRLDGNNAELGRTILNDAHLPKLEQVETMD 383


>gi|271962788|ref|YP_003336984.1| succinate--CoA ligase (ADP-forming) [Streptosporangium roseum DSM
           43021]
 gi|270505963|gb|ACZ84241.1| Succinate--CoA ligase (ADP-forming) [Streptosporangium roseum DSM
           43021]
          Length = 393

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/398 (37%), Positives = 227/398 (57%), Gaps = 30/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QAK L  +Y +PV +GVV  +V  A +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQAKELFAEYGIPVPRGVVAHTVEEARAAAEQLTGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V            +ILG  +        G  V+ V +E+ + I  E Y 
Sbjct: 57  -------GGVKVADDAADAEQKATQILGMDI-------KGHTVHKVLIEEASAIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     I S  GGMDIEEVA   P+K+ K+ + PL GV       + +   L 
Sbjct: 103 SFLLDRANRTFLAICSAAGGMDIEEVAHSAPEKVAKIPVSPLDGVDRARAREIAEAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     +L   L+ AF D+D SL+E+NP+I+  +G+++ LD K++ DDNA++R  D  
Sbjct: 163 VAALDGAAELIEKLWAAFVDEDASLVEVNPMILSADGQVKALDGKVTLDDNAVFRQSDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
              D   ED  E  AK  +L+Y+ LDG++G + NGAGL M+T+D++   G        PA
Sbjct: 223 AFEDKDAEDPLEAAAKAKDLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEAFPGQPKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +AA  +II SD SVK I +N+FGGI  CD +  GI+SA + ++    
Sbjct: 283 NFLDIGGGASAEVMAAGLEIIISDPSVKSIFVNVFGGITACDAVANGIVSAFQLLESRGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDD 386
            ++ PLV+RL+G N ++G +++A++ L+ V     +DD
Sbjct: 343 AVSRPLVVRLDGNNAELGRQILADAKLSGVELVDTMDD 380


>gi|317124200|ref|YP_004098312.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Intrasporangium
           calvum DSM 43043]
 gi|315588288|gb|ADU47585.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Intrasporangium
           calvum DSM 43043]
          Length = 396

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 135/400 (33%), Positives = 217/400 (54%), Gaps = 30/400 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +   + VPV  G + ++   A +A + +    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGAIATTPEEARAAAERIGQSSGGVTVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V +S     +   +ILG  +        G  V+ V +  GA I  E
Sbjct: 61  ----------GGVKVATSADEAQAHAEQILGMDI-------KGHTVHRVMIAQGAKIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR +     + S +GGMDIE++A + P  + K+ +DP +G+       + D  
Sbjct: 104 YYFSILLDRANRSYLAMCSKEGGMDIEQLAVERPDALAKVAVDPNVGIDEAKAREIVDAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L++ + D+D +L+E+NPL+  ++G +  LD K+S D NA +RH 
Sbjct: 164 GFDPETAAKIVPVLGRLWEVYRDEDATLVEVNPLVKTEDGEIIALDGKVSLDANAGFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY-------- 289
           D + L D +  D  E EAK+ +L+Y+ L+G++G + NGAGL M+T+D++           
Sbjct: 224 DHEALEDKTAADPFEAEAKEKDLNYVRLEGSVGIIGNGAGLVMSTLDVVAYAGSEIDSVR 283

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           G  PANFLD+GGGA  + +A    II SD  VK + +N+FGGI  CD +  GI+ A+  +
Sbjct: 284 GPKPANFLDIGGGASAEVMANGLHIILSDPQVKSVFVNVFGGITSCDAVANGIVGALDAL 343

Query: 350 KI--NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
               + PLV+RL+G NV+ G R++AE     +   +  D 
Sbjct: 344 GTEEDRPLVVRLDGNNVEEGRRILAERNHPRVIIEETMDG 383


>gi|314970658|gb|EFT14756.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL037PA3]
          Length = 391

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +GVV  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGVVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +      + ILG  +        G  V+ V + +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPQEAAEHAKAILGMDI-------KGHTVHKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ G+       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGIDDAKAREILTQAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D  L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 ESEQDAIAPAVIKLWETYRDEDAPLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 ALVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +A    +I SD  V  + +N+FGGI  CD +  GI  A++++  K  
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVHSVFVNVFGGITACDQVALGIKGALEKLGDKAT 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G  ++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRTILEEFNHPLVTMVPTMDEAASKAAELA 387


>gi|315605037|ref|ZP_07880091.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313316|gb|EFU61379.1| succinyl-CoA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 395

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/397 (33%), Positives = 221/397 (55%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ + +++ VPV    + S+   A    + L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARQMFKEHGVPVLDYRLASTPDEAREGARELLEGGATLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  + +      +EILG  +        G  V  V +  GADI  E
Sbjct: 61  ----------GGVKLAHTAEEAGEKAQEILGLDI-------KGHVVTRVMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DPL+G+ ++    + D  
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPLVGIDADVARRIVDEA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                       +   L++ + D+D +L+E+NPL++  +G +  +D K++ DDNA +RH 
Sbjct: 164 GFDPATGEAIAPVLQTLWEVYRDEDATLVEVNPLVLSPDGSVWAVDGKVTLDDNARFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY-----GGA 292
           D   L DV+ +D RE  AK+  L+Y+ L+G +G + NGAGL M+T+D++ +      G  
Sbjct: 224 DHAGLVDVAAQDPREAAAKEAGLNYVRLEGEVGVIGNGAGLVMSTLDVVAMAGEEFGGLK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-- 350
           PANFLD+GGGA  + +A   +II  D  V+ + +N+FGGI  CD + +GI+ A+  +   
Sbjct: 284 PANFLDIGGGASAEVMARGLEIILGDDQVRSVFVNVFGGITACDQVARGIIGALDALGET 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
              PLV+RL+G  V+ G  ++AE+   ++   +  D 
Sbjct: 344 ATKPLVVRLDGNRVEEGRAILAEARHPLVRMEETMDG 380


>gi|322370343|ref|ZP_08044902.1| succinyl-CoA synthetase subunit beta [Haladaptatus paucihalophilus
           DX253]
 gi|320550051|gb|EFW91706.1| succinyl-CoA synthetase subunit beta [Haladaptatus paucihalophilus
           DX253]
          Length = 380

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/397 (34%), Positives = 209/397 (52%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P     +  SV     A + +  P+ V K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKEVFSDAGIPTPDSALAESVEEVVEAAEDIGYPVAV-KAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++            +ILG  L        G  V  V VE   D + ELY+
Sbjct: 57  -------GGIKLAEDRDEAEEAAEDILGMDL-------KGYTVEQVLVEGAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG+DIE VA++ P  I +  IDP  G+             + 
Sbjct: 103 GVTMDRGEGKPVAMVSTKGGVDIEAVAEETPDAIAREHIDPAFGMHPYQARKAVFDAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +D   +   LY  + DKD +  EINPL++  +  +   D+ ++ DD+AL+RH D+ 
Sbjct: 163 KDIAMDVAGVLTTLYDLWSDKDANDAEINPLMVTSDDEVIAADAVLNIDDDALFRHPDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + S ED  E +A ++   Y+ LDGN+G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMEEDSYEDDLERKAGEYGFDYVRLDGNVGIIGNGAGLVMTTLDLVDYYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++V  A  ++ SD +V  ++ NIFGGI R D + KGI  A++ + +I  P+V+RL
Sbjct: 283 GGAKAERVTNALDMVFSDENVDSVVFNIFGGITRGDEVAKGINEALESLDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G  ++    + V     L+DA Q+ V   +
Sbjct: 343 AGTNAEEGMDILNTDLVQVEA--TLEDAVQRAVENAE 377


>gi|118619789|ref|YP_908121.1| succinyl-CoA synthetase subunit beta [Mycobacterium ulcerans Agy99]
 gi|189081755|sp|A0PWD1|SUCC_MYCUA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118571899|gb|ABL06650.1| succinyl-CoA synthetase (beta chain) SucC [Mycobacterium ulcerans
           Agy99]
          Length = 387

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 216/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A +    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKGLFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++          ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYEHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P ++ K+ +D   GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L+  F  +D +L+E+NPL+   + ++  LD K++ D NA +RH D  
Sbjct: 163 AEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPDHV 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ ++   ++T    +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADKAAELA 385


>gi|260907284|ref|ZP_05915606.1| succinyl-CoA synthetase subunit beta [Brevibacterium linens BL2]
          Length = 389

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 135/394 (34%), Positives = 222/394 (56%), Gaps = 24/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV K  V ++  AA+ A + L G + VVKSQ+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEKHGVPVLKAQVATTPEAAKKAAEDLGGGVVVVKSQVKMGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + +   +  ++ILG  +        G     V + +GADI  E Y 
Sbjct: 58  -------GGVKVAKNPEEAEARAKDILGLDI-------KGHITEKVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     + S +GG++IE++A++ P+ + K+ +  + G+ +     +       
Sbjct: 104 SVLLDRSNRTYLAMCSKEGGVEIEQLAEERPEALAKIPVSAIDGIDAAKAEEIAKEAGFD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +  +L+  F  +D SL+E+NPL+    G +  LD K+S D+NA +R  + +
Sbjct: 164 ADTAAKVAPVLMSLWTVFEKEDASLVEVNPLVKTGAGDIIALDGKVSLDENADFRQPEHE 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           ELRD S E+  E++AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 224 ELRDDSAENPLELKAKKLDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHSNVKPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A   ++I  D  VK + +N+FGGI  CD +  GI+ A++ +  +   
Sbjct: 284 FLDIGGGASAEVMANGLEVILGDEQVKSVFVNVFGGITACDAVADGIVKALEILGDQATK 343

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           PLV+RL+G NV+ G  ++ E+   ++T  D  D 
Sbjct: 344 PLVVRLDGNNVEEGRAILKEAANPLVTLTDTMDG 377


>gi|118466486|ref|YP_880328.1| succinyl-CoA synthetase subunit beta [Mycobacterium avium 104]
 gi|189081748|sp|A0QBP0|SUCC_MYCA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118167773|gb|ABK68670.1| succinyl-CoA synthetase beta chain [Mycobacterium avium 104]
          Length = 387

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/403 (34%), Positives = 215/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGRPVMV-KAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVTGVDLATARSIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPDNQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFEDRDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++AE+    VI A  +D  A K     
Sbjct: 343 PLVVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADKAAELA 385


>gi|254773954|ref|ZP_05215470.1| succinyl-CoA synthetase subunit beta [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 387

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/403 (34%), Positives = 215/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGARDIAAEIGLPVMV-KAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVTGVDLATARSIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFEDRDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILHDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++AE+    VI A  +D  A K     
Sbjct: 343 PLVVRLDGNNVDQGRRILAEANHPLVIQAETMDSGADKAAELA 385


>gi|31792140|ref|NP_854633.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis
           AF2122/97]
 gi|121636876|ref|YP_977099.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989347|ref|YP_002644034.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|260185851|ref|ZP_05763325.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           CPHL_A]
 gi|260204157|ref|ZP_05771648.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           K85]
 gi|289446523|ref|ZP_06436267.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis CPHL_A]
 gi|289573581|ref|ZP_06453808.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis K85]
 gi|59798840|sp|Q7U0Z1|SUCC_MYCBO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081749|sp|A1KH85|SUCC_MYCBP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778444|sp|C1ALT7|SUCC_MYCBT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|31617728|emb|CAD93837.1| PROBABLE SUCCINYL-COA SYNTHETASE (BETA CHAIN) SUCC (SCS-BETA)
           [Mycobacterium bovis AF2122/97]
 gi|121492523|emb|CAL70991.1| Probable succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|224772460|dbj|BAH25266.1| succinyl-CoA synthetase subunit beta [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|289419481|gb|EFD16682.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis CPHL_A]
 gi|289538012|gb|EFD42590.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis K85]
          Length = 387

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 163 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGLAM+T+D++   G       PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T    +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELA 385


>gi|294881825|ref|XP_002769505.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239872986|gb|EER02223.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 368

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/371 (41%), Positives = 229/371 (61%), Gaps = 5/371 (1%)

Query: 27  SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
           + +  E   + L G   VVK+Q+  GGRG+G FKE     +GGV + SS         ++
Sbjct: 1   NSNEVEDYARRLGGGDVVVKAQVLGGGRGRGHFKE--NGFQGGVHIASSPSEARIVAEQM 58

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
           L  +L+T+QTG +G     V + +   I+ E Y ++++DR  G    + S  GGM IEEV
Sbjct: 59  LNKSLVTRQTGLSGRTCKGVLLCEKLPIVAEKYFAIMLDRGLGGPVMVMSKHGGMSIEEV 118

Query: 147 AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLL 206
           A ++P  + K+ ID   G+T+       + L   G            LY+ F   D ++L
Sbjct: 119 AIEHPDAVTKIPIDVTTGLTTRQAEEAVEHLGFNGD--PSAMATLKGLYRTFVGADCTML 176

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALD 266
           E+NPL  +++GR+ V D+K++FDDNA +R   I   RDV+E D +E+ A +  L+YI+LD
Sbjct: 177 EVNPLAELEDGRIMVCDAKLAFDDNAAFRQRTIHSQRDVTEVDPKEVAASRCGLNYISLD 236

Query: 267 GNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G+IGCMVNGAGLAMATMD++ + GG+PANFLD+GG    ++V  A  II SDS+VK +LI
Sbjct: 237 GSIGCMVNGAGLAMATMDLLSVKGGSPANFLDIGGSVGVEEVKTALGIINSDSNVKSVLI 296

Query: 327 NIFGGIMRCDVLVKGILSAVKEVKIN-IPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           NIFGGI++CDV+ +GI+ A +E+ I+  P+V+RL G NV+ G  ++A++GL+     DL+
Sbjct: 297 NIFGGIVKCDVVAEGIVRAAQELSIDHKPIVVRLVGTNVERGKSILAQAGLDYYAIDDLN 356

Query: 386 DAAQKIVHAVK 396
           +AA K V   K
Sbjct: 357 EAAIKAVELSK 367


>gi|256380494|ref|YP_003104154.1| succinyl-CoA synthetase subunit beta [Actinosynnema mirum DSM
           43827]
 gi|255924797|gb|ACU40308.1| succinyl-CoA synthetase, beta subunit [Actinosynnema mirum DSM
           43827]
          Length = 389

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/393 (35%), Positives = 217/393 (55%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G V S+   A++  + L   + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKDLFAAHGVPVLPGEVASTPAEAKAIAEQLGTTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ ++          ILG  +        G  V+ V V   +DI  E Y 
Sbjct: 57  -------GGVKLATTPAETEEKATGILGLDI-------KGHTVHRVLVTPASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + K+ ID + GV       +    +  
Sbjct: 103 SFLLDRANRTFLAMASVEGGMEIEEVAVKNPEALAKIAIDAVEGVDRAKADEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D    L++ F  +D +L+E+NPL+    G++  LD K++ DDNA +RH    
Sbjct: 163 AEVADQVADTIVKLWETFVAEDATLVEVNPLVRDPEGKIVALDGKVTLDDNASFRHPAHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D   ED  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELVDKQAEDPLEAKAKEKDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHKGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A   +II  D+ V+ + +N+FGGI  CD +  GI+ A++ +  +   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDADVRSVFVNVFGGITSCDAVANGIVKALEILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G R++AE+   ++T +D  D
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVDTMD 375


>gi|269955535|ref|YP_003325324.1| succinyl-CoA synthetase subunit beta [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304216|gb|ACZ29766.1| succinyl-CoA synthetase, beta subunit [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 400

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 142/404 (35%), Positives = 227/404 (56%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  GVV ++   A +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEKHGVPVLGGVVATTPEEARAAAEKLGGGTVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG  +        G  V+ V V  GA I  E Y 
Sbjct: 58  -------GGVKLAHSPAEAAEKAGEILGMDI-------KGHAVHRVMVAQGARIAEEFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + ++ +DP++G+ +   A + +  +  
Sbjct: 104 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALARVAVDPIVGIDAAKAAEIVETAKFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRHLDI 239
              + D   +   L+  F  +D +L+E+NPL+  ++G +  LD K++ DDNA   RH D 
Sbjct: 164 AALQADVAAVIQQLWTVFTAEDATLVEVNPLVRTEDGAIVALDGKVTLDDNASEVRHPDH 223

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  D  E +AK H L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 224 EALEDKASSDPLEAKAKAHGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEEHGGVKPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA+   +AA   +I +D  VK + +N+FGGI  CD + KGI+ A++ +  + +
Sbjct: 284 NFLDIGGGANAQVMAAGLDVILNDPQVKSVFVNVFGGITACDEVAKGIVGALEILGDEAS 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G NV++G  ++ E+   ++T A  +D  A K     
Sbjct: 344 KPLVVRLDGNNVELGRTILREANHPLVTLAETMDGGADKAAELA 387


>gi|15608091|ref|NP_215466.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Rv]
 gi|15840375|ref|NP_335412.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           CDC1551]
 gi|148660730|ref|YP_001282253.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Ra]
 gi|148822160|ref|YP_001286914.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           F11]
 gi|167967813|ref|ZP_02550090.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Ra]
 gi|215402752|ref|ZP_03414933.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           02_1987]
 gi|215410539|ref|ZP_03419347.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429810|ref|ZP_03427729.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|215445097|ref|ZP_03431849.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T85]
 gi|218752616|ref|ZP_03531412.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis GM
           1503]
 gi|253800022|ref|YP_003033023.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 1435]
 gi|254231258|ref|ZP_04924585.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis C]
 gi|254363877|ref|ZP_04979923.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549931|ref|ZP_05140378.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260199972|ref|ZP_05767463.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T46]
 gi|289442367|ref|ZP_06432111.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T46]
 gi|289555268|ref|ZP_06444478.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 605]
 gi|289744682|ref|ZP_06504060.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           02_1987]
 gi|289753007|ref|ZP_06512385.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|289757036|ref|ZP_06516414.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T85]
 gi|289761086|ref|ZP_06520464.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis GM 1503]
 gi|294996436|ref|ZP_06802127.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           210]
 gi|297633473|ref|ZP_06951253.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730458|ref|ZP_06959576.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           KZN R506]
 gi|298524442|ref|ZP_07011851.1| succinyl-CoA synthetase, beta subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775081|ref|ZP_07413418.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu001]
 gi|306782005|ref|ZP_07420342.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu002]
 gi|306783630|ref|ZP_07421952.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu003]
 gi|306787994|ref|ZP_07426316.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu004]
 gi|306792331|ref|ZP_07430633.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu005]
 gi|306796730|ref|ZP_07435032.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu006]
 gi|306806797|ref|ZP_07443465.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu007]
 gi|306966995|ref|ZP_07479656.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu009]
 gi|306971188|ref|ZP_07483849.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu010]
 gi|307078915|ref|ZP_07488085.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu011]
 gi|307083473|ref|ZP_07492586.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu012]
 gi|313657786|ref|ZP_07814666.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           KZN V2475]
 gi|2829506|sp|P71559|SUCC_MYCTU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081754|sp|A5U0Z1|SUCC_MYCTA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1524211|emb|CAB01999.1| PROBABLE SUCCINYL-CoA SYNTHETASE (BETA CHAIN) SUCC (SCS-BETA)
           [Mycobacterium tuberculosis H37Rv]
 gi|13880542|gb|AAK45226.1| succinyl-CoA synthetase, beta subunit [Mycobacterium tuberculosis
           CDC1551]
 gi|124600317|gb|EAY59327.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis C]
 gi|134149391|gb|EBA41436.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504882|gb|ABQ72691.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           H37Ra]
 gi|148720687|gb|ABR05312.1| succinyl-CoA synthetase beta subunit sucC [Mycobacterium
           tuberculosis F11]
 gi|253321525|gb|ACT26128.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 1435]
 gi|289415286|gb|EFD12526.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T46]
 gi|289439900|gb|EFD22393.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 605]
 gi|289685210|gb|EFD52698.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           02_1987]
 gi|289693594|gb|EFD61023.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|289708592|gb|EFD72608.1| succinyl-CoA synthetase (beta chain) sucC [Mycobacterium
           tuberculosis GM 1503]
 gi|289712600|gb|EFD76612.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T85]
 gi|298494236|gb|EFI29530.1| succinyl-CoA synthetase, beta subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216428|gb|EFO75827.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu001]
 gi|308325242|gb|EFP14093.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu002]
 gi|308331628|gb|EFP20479.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu003]
 gi|308335439|gb|EFP24290.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu004]
 gi|308339245|gb|EFP28096.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu005]
 gi|308342889|gb|EFP31740.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu006]
 gi|308346807|gb|EFP35658.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu007]
 gi|308355385|gb|EFP44236.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu009]
 gi|308359324|gb|EFP48175.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu010]
 gi|308363231|gb|EFP52082.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu011]
 gi|308366888|gb|EFP55739.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis SUMu012]
 gi|323720662|gb|EGB29740.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis CDC1551A]
 gi|326904827|gb|EGE51760.1| succinyl-CoA synthetase subunit sucC [Mycobacterium tuberculosis
           W-148]
 gi|326904829|gb|EGE51762.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis W-148]
 gi|328459764|gb|AEB05187.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis KZN 4207]
          Length = 387

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/403 (33%), Positives = 220/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 163 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T    +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELA 385


>gi|320334598|ref|YP_004171309.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           maricopensis DSM 21211]
 gi|319755887|gb|ADV67644.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           maricopensis DSM 21211]
          Length = 381

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/381 (35%), Positives = 208/381 (54%), Gaps = 21/381 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K LLR++ V V +G V  +     +  +    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKELLRRFGVNVQEGKVAHTPEEVRAIAEEYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--EL 118
                  GGV+   +    + + ++ILG  +        G  VN V V    DI    E 
Sbjct: 57  -------GGVKFSPTADKAVENAQKILGMDI-------KGLTVNKVLVTKAVDIDAGVEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +A  +GGM+IEE+A + P+ I +  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSFTLMACAEGGMEIEELAAERPEAIIRHRVDPVAGLRPFEAREIALKAG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G       D+   + KA  + D +L+EINPL +  +G    LD+K   DDNA+YRH D
Sbjct: 163 FKGNL-NKIADMMVKMSKAALELDATLVEINPLFVDADGTPLALDTKFDMDDNAVYRHKD 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           I   R++  E   E+EA ++  +Y+ LDGN+G + NGAG+ M ++D++   G  PANFLD
Sbjct: 222 IAAWRELEAEHPLEVEASEYGFAYVKLDGNVGVLGNGAGIVMTSLDVVNRAGAKPANFLD 281

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA  D V  A K+++ DS VK I +NIFGGI R D + KGI+ A++E  +  P+ MR
Sbjct: 282 IGGGARADIVYNAVKLVSKDSDVKSIFVNIFGGITRADEVAKGIIQALQEGILTKPVRMR 341

Query: 359 LEGANVDIGNRLIAESGLNVI 379
           + G   +    L+A+    +I
Sbjct: 342 VAGTAEEEAKALLADVNSPLI 362


>gi|75764883|ref|ZP_00744242.1| Succinyl-CoA synthetase beta chain [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487628|gb|EAO51485.1| Succinyl-CoA synthetase beta chain [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 307

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 157/313 (50%), Positives = 203/313 (64%), Gaps = 10/313 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+    G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ELRD+ EEDS+EIEA +++L+YI LDGNIG MVNGAGLAMATMDIIK Y G PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGRMVNGAGLAMATMDIIKHYHGDPANFLDVG 290

Query: 301 GGADQDKVAAAFK 313
           GGA  +KV  + +
Sbjct: 291 GGATAEKVTESIQ 303


>gi|120405820|ref|YP_955649.1| succinyl-CoA synthetase subunit beta [Mycobacterium vanbaalenii
           PYR-1]
 gi|189081756|sp|A1TEP3|SUCC_MYCVP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119958638|gb|ABM15643.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           vanbaalenii PYR-1]
          Length = 387

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  S   A++  + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTESAEDAKAIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +  ++  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPEDALTHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV       + +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTIAKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDKDATDPLELKAKENDLNYVKLDGAVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDSQVKSVFVNVFGGITACDAVANGIVKALEILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R+++E+    VI A  +D  A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILSEANHPLVIQADTMDSGADKAAELA 385


>gi|215426222|ref|ZP_03424141.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           T92]
 gi|289749475|ref|ZP_06508853.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T92]
 gi|289690062|gb|EFD57491.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T92]
          Length = 387

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/403 (33%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D NA +R     
Sbjct: 163 AEVLDTAAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E +D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFKDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T    +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELA 385


>gi|118469786|ref|YP_889762.1| succinyl-CoA synthetase subunit beta [Mycobacterium smegmatis str.
           MC2 155]
 gi|189081751|sp|A0R3M4|SUCC_MYCS2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|118171073|gb|ABK71969.1| succinyl-CoA synthetase, beta subunit [Mycobacterium smegmatis str.
           MC2 155]
          Length = 387

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/403 (34%), Positives = 219/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP + G V  S   A++  + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTSPGRVTDSAEDAKTIAEEIGRPVMV-KAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAFTHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D+NA +R     
Sbjct: 163 AEVLDAAAVTIQKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDENAGFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I  DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVQALQILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+    VI A  +D  A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVIQAETMDAGADKAAELA 385


>gi|269218840|ref|ZP_06162694.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269211951|gb|EEZ78291.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 403

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/392 (35%), Positives = 219/392 (55%), Gaps = 23/392 (5%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +++EYQA+ L   + VPV+ G+V S+   AESA + L G L VVK+Q+  GGRGK     
Sbjct: 14  DLYEYQARELFEAHGVPVSAGIVASTPQEAESAARELGGGLVVVKAQVKTGGRGKA---- 69

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  S +       EILG  +        G +V  V V  GADI RE Y S
Sbjct: 70  ------GGVKLARSPQEAADRAEEILGMDI-------KGHKVRRVLVASGADIAREFYFS 116

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR+      + S  GGMDIE +AK+ P+ + K+ +DP +G+       +        
Sbjct: 117 VLLDRSERRYLAMCSVDGGMDIETLAKERPEALAKVAVDPNVGIDEAKAREIASAAGFDA 176

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +       +   L+  +  +D +L+E+NPL++ + G +  LD K++ DDNA +RH   + 
Sbjct: 177 ETGEKAVPVLLKLWDVYSGEDATLVEVNPLVLTEQGEIVALDGKVTLDDNARFRHSGHEA 236

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PANFL 297
           L D + ED  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G      PANFL
Sbjct: 237 LVDKAAEDPLEAKAKALGLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEEYGVGPANFL 296

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INIPL 355
           D+GGGAD + ++    +I  D  V+ + +N+FGGI  CD + KGI++A+  +    + P+
Sbjct: 297 DIGGGADANVMSNGLAVILGDPDVRSVFVNVFGGITACDEVAKGIVAALDALGEAASKPI 356

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           V+RL+G  V  G  ++A++   ++T +D  D 
Sbjct: 357 VVRLDGNAVAEGRAILAQANHPLVTLVDTMDG 388


>gi|296169711|ref|ZP_06851328.1| succinyl-CoA ligase subunit beta [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895608|gb|EFG75305.1| succinyl-CoA ligase subunit beta [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 387

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/403 (34%), Positives = 217/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGAREIATEIGRPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKFAATPEDAYEHAKNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+     L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLATARSIAQQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+     ++  LD K++ D NA +RH D  
Sbjct: 163 AEVLDAAAVTINKLWELFVAEDATLVEVNPLVRDPKDQILALDGKVTLDANADFRHPDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D +  D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRASTDPLELKAKEHDLNYVKLDGAVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++A++    VI A  +D  A K     
Sbjct: 343 PLVVRLDGNNVDEGRRILAQANHPLVIQAETMDAGADKAAELA 385


>gi|55377354|ref|YP_135204.1| succinyl-CoA synthetase subunit beta [Haloarcula marismortui ATCC
           43049]
 gi|74520095|sp|Q5V4Q4|SUCC_HALMA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|55230079|gb|AAV45498.1| succinyl-CoA synthetase beta chain [Haloarcula marismortui ATCC
           43049]
          Length = 382

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 135/400 (33%), Positives = 215/400 (53%), Gaps = 22/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P     +  +V  A  A + +  P+  +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKQVFADAGIPTPASQLAETVDEAVDAAEEIGYPV-AIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  S +       +I+G  L        G  V+ V VE+  D + ELY+
Sbjct: 57  -------GGIKLVESKEEAREAAEDIIGMDL-------KGYHVSKVLVEEAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  IDP  G+       +     + 
Sbjct: 103 GVTMDRGEGRPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKVVYEAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY+ + D+D +  EINPL+I  +  +   D+ ++ D +AL+R  +I 
Sbjct: 163 REVANDVASVLTTLYQLWDDRDGADTEINPLMITSDDEVIAADAVMNVDGDALFRQPEIA 222

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           E+  + +E D  E +A ++   Y+ LDGN+G + NGAGL M T+D++  Y G PANFLDV
Sbjct: 223 EMGEEAAEGDELEQKADEYGFDYVRLDGNVGIIGNGAGLVMTTLDLVDYYDGEPANFLDV 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMR 358
           GGGA  D++A A  ++ SD +V  ++ NIFGGI R D +  GI  A+++  +I  P+ +R
Sbjct: 283 GGGAKADRIANALDMVFSDENVDSVVFNIFGGITRGDEVANGINQALEQFDEIPKPVTVR 342

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           L G N + G  ++ E  + V     L+DA Q+ V   K V
Sbjct: 343 LAGTNAEEGMEILNEDLVTVEH--TLEDAVQRAVEYAKEV 380


>gi|108801291|ref|YP_641488.1| succinyl-CoA synthetase subunit beta [Mycobacterium sp. MCS]
 gi|119870442|ref|YP_940394.1| succinyl-CoA synthetase subunit beta [Mycobacterium sp. KMS]
 gi|126437272|ref|YP_001072963.1| succinyl-CoA synthetase subunit beta [Mycobacterium sp. JLS]
 gi|122976542|sp|Q1B3V2|SUCC_MYCSS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081752|sp|A3Q5P5|SUCC_MYCSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|189081753|sp|A1UL96|SUCC_MYCSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|108771710|gb|ABG10432.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. MCS]
 gi|119696531|gb|ABL93604.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. KMS]
 gi|126237072|gb|ABO00473.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. JLS]
          Length = 387

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/403 (32%), Positives = 219/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++  + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEDAKAIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATADDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GG++IEEVA   P ++ ++ +D   GV       + +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGVEIEEVAATKPDRLARIPVDATKGVDEAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +RH +  
Sbjct: 163 AEVLDAAAVTIAKLWEVFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII-----KLYGGAPAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++     K  G  PAN
Sbjct: 223 EFEDRDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDSQVKSVFVNVFGGITACDAVANGIVKALEILGEEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G +++A++   ++  A  +D+ A K     
Sbjct: 343 PLVVRLDGNRVEEGRKILADANHPLVVLAQTMDEGADKAAELA 385


>gi|329945409|ref|ZP_08293172.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328529031|gb|EGF55962.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 401

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/405 (34%), Positives = 233/405 (57%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARDLFRQHGVPVLNGAVATTPEEARSAAQSLLDAGSDLVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +++   +  R+ILG  +        G  V  V + DG D+  E
Sbjct: 61  ----------GGVKLARTVEEAEARARDILGMDI-------KGHTVRAVLISDGVDLDAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DRT      + S +GGMDIE +A + P+ + ++ IDPL GVT      + +  
Sbjct: 104 YYFSILLDRTERQYLAMCSREGGMDIETLAAERPEALARVGIDPLEGVTPAVAHRIVEAA 163

Query: 178 ELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             + G    +   +   L++ F  +D +L+E+NPL+   +GR+  LD K++ DDN+ +RH
Sbjct: 164 GFEAGALADEVAAVIERLWEVFTAEDATLVEVNPLVKATDGRIIALDGKVTLDDNSRFRH 223

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK-----LYGG 291
               EL D +  D  E  A++  L+Y+ L+G +G + NGAGL M+T+D++        G 
Sbjct: 224 PAHAELVDNAATDPLEARAREAGLNYVRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGM 283

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  CD + +GI++AV+ +  
Sbjct: 284 KPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITSCDTVAQGIVTAVESLGG 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +  P+V+RL+G N + G  ++A++ +  +T +D  D A  +V A+
Sbjct: 344 LPKPVVVRLDGNNAETGRAILADAAIEGVTVVDTMDGAADVVTAI 388


>gi|71892111|ref|YP_277843.1| succinyl-CoA synthetase, beta chain [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796217|gb|AAZ40968.1| succinyl-CoA synthetase, beta chain [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 391

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/398 (39%), Positives = 238/398 (59%), Gaps = 18/398 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI--KTLPGPLYVVKSQIHAGGRGKGR 58
           MN++EYQAK L+ KYN+PV KG V ++++  E  I   ++    +VVK Q+ AGGRGK  
Sbjct: 1   MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGPWVVKCQVRAGGRGKS- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV +  S K+++S   + LG+ LIT QT  TG  V  + +E    I++E 
Sbjct: 60  ---------GGVCLVHSTKNILSFANKWLGNRLITYQTTDTGELVTSILIEPAVKIIQEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+ +DR    +  +ASTQGGM+IE   +  P  I K++I+P +G+       L   L 
Sbjct: 111 YLSISIDRDESQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPYQGRILACKLG 170

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L G        +  ++ +   + D++L+EINPL I  +     LD+K+  D NA++R  +
Sbjct: 171 LSGAKINQFSRIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQSE 230

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  +         +     + ++YI L+GNIGCMVNGAGLAMATMD+IK  GG PANFLD
Sbjct: 231 LLNI-----CAINKPIDMLNFINYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFLD 285

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKINIPLVM 357
           +GGGA+++ + +AF +I  ++ V+ IL+NIFGGI+ CD++ + I++A+ +    +IP+V 
Sbjct: 286 IGGGANKECIISAFNMILKNAKVQAILVNIFGGIVCCDLVAECIITALARYTTKHIPIVA 345

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           RLEG N  +G+  +  S LN+I   +L  A Q+ V AV
Sbjct: 346 RLEGNNSTLGSNRLINSKLNIIVTDNLIYAIQQSVTAV 383


>gi|76802812|ref|YP_330907.1| succinyl-CoA synthetase subunit beta [Natronomonas pharaonis DSM
           2160]
 gi|121717446|sp|Q3INN3|SUCC_NATPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|76558677|emb|CAI50269.1| succinate--CoA ligase (ADP-forming), beta subunit [Natronomonas
           pharaonis DSM 2160]
          Length = 380

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 134/397 (33%), Positives = 214/397 (53%), Gaps = 21/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +PV +  + S+V  A  A   +  P+ + K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKGVFADAGIPVPESTLASTVDEAVEAADDIGYPVAI-KAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +         EILG  L        G  V+ V VE   D   ELY+
Sbjct: 57  -------GGIKLVENADEAREAADEILGMDL-------KGLHVDRVLVEAAVDFTDELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +G    + ST+GG++IEEVA++ P  I +  IDP  G+             + 
Sbjct: 103 GVTMDRAAGKPVAMVSTRGGVNIEEVAEEDPDAIVREHIDPAFGMHPFQARKAAFEAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY+ + DKD + +E+NPL++  +  +   D+ ++ D++AL+RH D++
Sbjct: 163 RAVANDVASILTQLYELWADKDATEIEVNPLMVTDDDEVIAADAVMNIDEDALFRHPDLE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + +  D  E +A ++   Y+ L GN G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 EMEEEAAGDELEAKANEYGFDYVRLSGNTGIIGNGAGLVMTTLDLVDHYGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++VA A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I  P+V+RL
Sbjct: 283 GGAKAERVANALDMVFSDDNVDSVVFNIFGGITRGDEVAKGINEALEQFDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G  ++    + V     L+DA Q+ V   +
Sbjct: 343 AGTNAEEGMEILNTDLVTVEK--TLEDAVQRAVKYAE 377


>gi|119964224|ref|YP_946832.1| succinyl-CoA synthetase subunit beta [Arthrobacter aurescens TC1]
 gi|189046878|sp|A1R3M0|SUCC_ARTAT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119951083|gb|ABM09994.1| succinyl-CoA synthetase, beta subunit [Arthrobacter aurescens TC1]
          Length = 389

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/403 (35%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  + +  +     ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTAEEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + K+ IDP +G+       +       
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFA 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R    D+   L+  F  +D +L+E+NPL+    G +  LD K+S D+NA +RH+   
Sbjct: 163 EELRGKVADVILKLWDVFKKEDATLVEVNPLVRTGAGEIVALDGKVSLDENADFRHVHHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 HLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +A    +I  DS VK + +N+FGGI  CD + KGI+ A+ E+    N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILGDSQVKSVFVNVFGGITACDAVAKGIVGALAELGSSANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTLAATMDEGADKAAELA 385


>gi|220911707|ref|YP_002487016.1| succinyl-CoA synthetase subunit beta [Arthrobacter chlorophenolicus
           A6]
 gi|254778427|sp|B8HDC2|SUCC_ARTCA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|219858585|gb|ACL38927.1| succinyl-CoA synthetase, beta subunit [Arthrobacter
           chlorophenolicus A6]
          Length = 389

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/403 (35%), Positives = 220/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAYTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S    +     ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKSADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + K+ IDP +G+       +       
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFA 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R    D+   L+  F  +D +L+E+NPL+    G +  LD K+S D+NA +RH    
Sbjct: 163 EELRGKVADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVSLDENAEFRHAKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           +L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 QLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD + KGI+ A+ E+    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVAKGIVGALAELGHTANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILNEANHPLVTLAATMDEGADKAAELA 385


>gi|283457345|ref|YP_003361921.1| succinyl-CoA synthetase subunit beta [Rothia mucilaginosa DY-18]
 gi|283133336|dbj|BAI64101.1| succinyl-CoA synthetase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 428

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/402 (35%), Positives = 225/402 (55%), Gaps = 26/402 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L  K+ VPV KG+V ++   A++A + + G L V+K+Q+  GGRGK     
Sbjct: 42  DLFEYQARELFAKHGVPVLKGIVATTPEEAKAAAEEIGG-LTVIKAQVKTGGRGKA---- 96

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  S +      + ILG  +        G  V+ V V DGADI  E Y S
Sbjct: 97  ------GGVKLAKSPEEAYEHAKAILGMDI-------KGHTVHRVLVADGADIAEEYYFS 143

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           LL+DR +     + S +GGM+IE++A + P+ + K+ +DPL+G+       +        
Sbjct: 144 LLLDRANRSYLAMCSVEGGMEIEQLAAERPEALAKIEVDPLVGLDQAKAEEIAKAAGFSA 203

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           + +     +   L + +  +D +L+E+NPL++   G +  LD K+S DDNA +R  + + 
Sbjct: 204 ELQEKVVPVLVKLGEVYTKEDATLVEVNPLVLTPEGTILALDGKVSLDDNAEFRQPEHEA 263

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANF 296
           L D S E+  E +AKQ +L+Y+ LDG +G + NGAGL M+T+D++   G       PANF
Sbjct: 264 LVDKSAENPLEAKAKQFDLNYVKLDGEVGIVGNGAGLVMSTLDVVAYAGENHGNVKPANF 323

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INIP 354
           LD+GGGA  + +AA  +II  D  VK + +N+FGGI  CD +  GI+ A++ +      P
Sbjct: 324 LDIGGGASAEVMAAGLEIILGDEQVKSVFVNVFGGITACDAVADGIVKALEILGDAATKP 383

Query: 355 LVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           LV+RL+G NV  G R+++E+   ++  A  +D  A K     
Sbjct: 384 LVVRLDGNNVAEGRRILSEANHPLVVLAETMDSGADKAAELA 425


>gi|309811916|ref|ZP_07705688.1| succinate-CoA ligase, beta subunit [Dermacoccus sp. Ellin185]
 gi|308434128|gb|EFP57988.1| succinate-CoA ligase, beta subunit [Dermacoccus sp. Ellin185]
          Length = 394

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/399 (32%), Positives = 218/399 (54%), Gaps = 29/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +   + VPV  G   ++   A++A + +    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGQTATTPEEAKAAAEQIGAKSGGVTVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  S        ++ILG  +        G  V  V +  GA I  E
Sbjct: 61  ----------GGVKVAKSADEAEQYAKDILGMDI-------KGHTVGTVMIAQGAKIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR +     + S +GG++IE++A + P+ + ++ +DP +G+       +    
Sbjct: 104 YYFSILLDRANRSYLAMCSKEGGVEIEQLAVERPEALARIEVDPNVGIDGAKADEIVKAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L++ + D+D +L+E+NPL+  ++G +  LD K++ D+NA +RH 
Sbjct: 164 GFDDETAAKVAPVLVKLWETYRDEDATLVEVNPLVKTEDGDIIALDGKVTLDENAGFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------- 290
           D + L D +  D  E +AK  +L+Y+ LDGN+G + NGAGL M+T+D++   G       
Sbjct: 224 DHEALEDKAAADPLEAKAKALDLNYVKLDGNVGIIGNGAGLVMSTLDVVAYAGEDFTGGK 283

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
             PANFLD+GGGA  + +A    +I +D  VK + +N+FGGI  CD +  GI+ A+K++ 
Sbjct: 284 AKPANFLDIGGGASAEVMANGLDVILNDEQVKSVFVNVFGGITACDAVANGIVGALKKLG 343

Query: 351 --INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
                PLV+RL+G NV+ G  ++++    ++T +D  D 
Sbjct: 344 DAATKPLVVRLDGNNVEEGRAILSDFNHPLVTVVDTMDG 382


>gi|323357166|ref|YP_004223562.1| succinyl-CoA synthetase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323273537|dbj|BAJ73682.1| succinyl-CoA synthetase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 387

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/403 (35%), Positives = 225/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  KY VPV  G++  +   A++A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKYEVPVLAGIIADTPEEAKAAAEKLGG-VVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +        + ILG  +        G  V  V V  GA I +E Y 
Sbjct: 57  -------GGVKVAKNPDEAFEAAQAILGLDI-------KGHVVKRVMVAAGARIAKEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     ++S +GGM+IEE+A + P  + ++ +DP+ G+T E    +    +  
Sbjct: 103 SVLLDRSNRSYLSLSSVEGGMEIEELAVERPDALARIEVDPIEGITPEKALEIARAAKFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+F  LY  +  +D +L+E+NPLI  ++G +  LD K+S D+NA +RH D +
Sbjct: 163 EELAPKVADVFVKLYNVYKGEDATLVEVNPLIQSEDGDIIALDGKVSLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D    D  E +AKQH+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKDAADPLEAKAKQHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA    +AA   +I  D  VK + +N+FGGI  C  + +GI+ A++ +      
Sbjct: 283 FLDIGGGASATVMAAGLDVILGDEQVKSVFVNVFGGITSCVAVAEGIVKALEILGDTATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G  ++A +   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNQVEEGREILAGANHPLVTLAAGMDEGADKAAELA 385


>gi|111220617|ref|YP_711411.1| succinyl-CoA synthetase subunit beta [Frankia alni ACN14a]
 gi|111148149|emb|CAJ59818.1| succinyl-CoA synthetase, beta subunit [Frankia alni ACN14a]
          Length = 405

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/392 (36%), Positives = 212/392 (54%), Gaps = 24/392 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQAK L  ++ VPV  G   ++   A +    L G + VVK+Q+          K 
Sbjct: 19  DLFEYQAKKLFAEHGVPVPTGKTATTPEEARAIATELGGKV-VVKAQV----------KA 67

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV+V        +    ILG  +        G  V+ V VE+ ++I  E Y S
Sbjct: 68  GGRGKAGGVKVADGPDDAFAKATAILGMDI-------KGHTVHSVLVEEASNIAEEYYAS 120

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            L+DR +     +AS +GGM+IEEVA   P  + ++ IDPL GV +     +    +L  
Sbjct: 121 FLLDRANRTFLAMASREGGMEIEEVAATNPDALARIAIDPLTGVDAAKAREIAVAAKLPE 180

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
            A     +L   L+  F   D +L+E+NPLI+  +GR+  LD K+S D+NA +RH + + 
Sbjct: 181 TALDGAAELLAKLWTVFVKSDATLVEVNPLILTADGRVVALDGKVSLDENADFRHPENEA 240

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PANF 296
             DVS  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++   G       PANF
Sbjct: 241 FVDVSAVDPLEQKAKEKGLNYVKLEGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPANF 300

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPL 355
           LD+GGGA  + +A    II  D SVK + +NIFGGI  CD +  GI+ A+K V  +  PL
Sbjct: 301 LDIGGGASAEVMANGLSIILGDPSVKSVFVNIFGGITACDAVANGIVQALKIVGDVTTPL 360

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           V+RL+G N + G R++ E+ L+V+  +D  D 
Sbjct: 361 VVRLDGNNAEEGRRILKEANLSVVKPVDTMDG 392


>gi|145222455|ref|YP_001133133.1| succinyl-CoA synthetase subunit beta [Mycobacterium gilvum PYR-GCK]
 gi|315442901|ref|YP_004075780.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Mycobacterium
           sp. Spyr1]
 gi|189081750|sp|A4T6V7|SUCC_MYCGI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145214941|gb|ABP44345.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           gilvum PYR-GCK]
 gi|315261204|gb|ADT97945.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Mycobacterium
           sp. Spyr1]
          Length = 387

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/403 (33%), Positives = 218/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  S   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDSAEDAKAIATEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     + S +GGM+IEEVA   P ++ K+ ++ + GV       + +   L 
Sbjct: 103 SFLLDRSNRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVNAVKGVDLAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFTKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQEGHK 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +DS VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDSQVKSVFVNVFGGITSCDAVANGIVKALEILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++AE+    V+ A  +D  A K     
Sbjct: 343 PLVVRLDGNNVDEGRRILAEANHPLVVQAETMDSGADKAAELA 385


>gi|152967942|ref|YP_001363726.1| succinyl-CoA synthetase subunit beta [Kineococcus radiotolerans
           SRS30216]
 gi|151362459|gb|ABS05462.1| succinyl-CoA synthetase, beta subunit [Kineococcus radiotolerans
           SRS30216]
          Length = 411

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/402 (34%), Positives = 226/402 (56%), Gaps = 25/402 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L   + VPV  G V ++   A +A + + G   VVK+Q+  GGRGK     
Sbjct: 22  DLFEYQARDLFAAHGVPVLDGRVATTPEEARAAAEAMGGGTVVVKAQVKTGGRGKA---- 77

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  S +      REILG  +        G  V+ V + +GA I  E Y S
Sbjct: 78  ------GGVKLAHSPEEAGERAREILGMDI-------KGHTVHQVMIAEGARIAEEFYFS 124

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR++     + S +GGM+IE++A + P+ + ++ +D L G+ +   A + +      
Sbjct: 125 VLLDRSNRTYLAMCSVEGGMEIEQLAVERPEALARVPVDALTGIDAAKAAEIVEAAGFAP 184

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           + R    D+   L+  F  +D +L+E+NPL+  ++G +  LD K++ D+NA +RH    E
Sbjct: 185 ELREKVADVVVKLWGVFTAEDATLVEVNPLVRTEDGSIVALDGKVTLDENADFRHPAHAE 244

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANF 296
           L D +  D  E +AK+  L+Y+ LDG +G + NGAGL M+T+D++   G       PANF
Sbjct: 245 LVDAAAADPLEAKAKELGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPANF 304

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA    +A    +I +D+ VK + +N+FGGI  CD + KGI++A+  +  +   P
Sbjct: 305 LDIGGGASAQVMANGLDVILNDAQVKSVFVNVFGGITACDEVAKGIVAALGILGDEATKP 364

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD-AAQKIVHAV 395
           LV+RL+G NV+ G R++AE+   ++T +D  D AA +     
Sbjct: 365 LVVRLDGNNVEEGRRILAEAAHPLVTVVDTMDGAADRAAELA 406


>gi|293189082|ref|ZP_06607808.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces
           odontolyticus F0309]
 gi|292821927|gb|EFF80860.1| succinyl-CoA ligase [ADP-forming] subunit beta [Actinomyces
           odontolyticus F0309]
          Length = 395

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/397 (32%), Positives = 214/397 (53%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ + +++ VPV    + S+   A    + L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARQMFKEHGVPVLDYRLASTPEEAREGARELLADGASLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +          ILG  +        G  V  V +  GADI  E
Sbjct: 61  ----------GGVKLAHTADEAYEKAEAILGLDI-------KGHIVKKVMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DP +G+ +E    +    
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPAVGINAEVARRIAKEA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                       +   L+  + D+D +L+E+NPL+   +G +  +D K++ DDNA +RH 
Sbjct: 164 GFDEATAEAIAPVLETLWTVYRDEDATLVEVNPLVSSPDGSVWAVDGKVTLDDNARFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY-----GGA 292
              EL DV+ +D RE  AK   L+Y+ L+G +G + NGAGL M+T+D++ +      G  
Sbjct: 224 GHAELVDVAAQDPREAAAKAAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAMAGEEFGGMK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-- 350
           PANFLD+GGGA  + +A    II  D  V+ + +N+FGGI  CD + +GI+ A++ +   
Sbjct: 284 PANFLDIGGGASAEVMAKGLDIILGDEQVRSVFVNVFGGITACDQVARGIIGALETLGDA 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            + PLV+RL+G  V+ G  ++AE+   ++   +  D 
Sbjct: 344 ASKPLVVRLDGNKVEEGRAILAEAAHPLVHMEETMDG 380


>gi|94985192|ref|YP_604556.1| succinyl-CoA synthetase, beta subunit [Deinococcus geothermalis DSM
           11300]
 gi|189029905|sp|Q1IZE7|SUCC_DEIGD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|94555473|gb|ABF45387.1| succinyl-CoA synthetase, beta subunit [Deinococcus geothermalis DSM
           11300]
          Length = 385

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/381 (36%), Positives = 203/381 (53%), Gaps = 21/381 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K LLR++ V V +G V  +        +    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKELLRRFGVNVQEGKVAYTPDEVRDIAREYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--EL 118
                  GGV+   +      + + ILG  +        G  V  V V    DI    E 
Sbjct: 57  -------GGVKFSPTPDKAYENGQNILGMDI-------KGLTVKKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI K  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSYTLMASAEGGMEIEEVAAATPEKIIKYRVDPITGLRPFEAREVALQAG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G       D+   + +A    D  L+EINPL + ++G    LD+K   DDNA+YRH D
Sbjct: 163 FKGNL-NKIADMMVKMSEAALKMDAVLVEINPLFVDESGTPLALDTKFEIDDNAMYRHKD 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           + E R++  E   EIEA ++  +Y+ LDGN+G + NGAG+ M ++D++   G  PANFLD
Sbjct: 222 LAEWRELEAEHPLEIEASKYGFAYVKLDGNVGVLGNGAGIVMTSLDVVNRAGAKPANFLD 281

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA  D V  A K+++ D  VK I +NIFGGI R D + KGI+ A+ E  +  P+ MR
Sbjct: 282 IGGGARADIVYNAVKLVSKDPDVKSIFVNIFGGITRADEVAKGIIQALNEGILTKPVRMR 341

Query: 359 LEGANVDIGNRLIAESGLNVI 379
           + G   +    L+AE    +I
Sbjct: 342 VAGTAEEEAKALLAEVNSPLI 362


>gi|254823468|ref|ZP_05228469.1| succinyl-CoA synthetase subunit beta [Mycobacterium intracellulare
           ATCC 13950]
          Length = 387

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/403 (34%), Positives = 215/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A      +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTDTAEGAREIATEIGRPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++        + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAYEHAKNILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLATARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+     ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTINKLWEVFVAEDATLVEVNPLVRDPKDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+H+L+Y+ LDG++G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDRDATDPLELKAKEHDLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD +  GI++A+  +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDKQVKSVFVNVFGGITSCDAVANGIVTALNMLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NVD G R++A++    VI A  +D  A K     
Sbjct: 343 PLVVRLDGNNVDEGRRILAQANHPLVIQAETMDAGADKAAELA 385


>gi|257068098|ref|YP_003154353.1| succinyl-CoA synthetase subunit beta [Brachybacterium faecium DSM
           4810]
 gi|256558916|gb|ACU84763.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Brachybacterium
           faecium DSM 4810]
          Length = 389

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/393 (35%), Positives = 219/393 (55%), Gaps = 23/393 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  GVV     AA++  + L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLGGVVAEDPAAAKAGAEKLGTPVVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +       EILG  +        G  V+ V +  GADI  E Y 
Sbjct: 58  -------GGVKIAKSPEEAEQKASEILGMDI-------KGHTVHRVMIAAGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +     + S +GGM+IE++A + P+ + ++ +DP +G+       +    +  
Sbjct: 104 SLLLDRANRNYLAMCSVEGGMEIEQLAVERPEALARVAVDPNVGIDQAKAEEIVAAAKFD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L+ A+ ++D +L+E+NPL+   +G +  LD KI+ DDNA +R     
Sbjct: 164 AETGAKVAPVLVKLWDAYREEDATLVEVNPLVKTGDGEIVALDGKITLDDNAQFRQEGHS 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL DV+ ED  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++      +G  PANF
Sbjct: 224 ELVDVASEDPLETKAKSLDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGVKPANF 283

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INIP 354
           LD+GGGA  + +A    +I  D  V  + +N+FGGI  CD +  GI+ A+K++      P
Sbjct: 284 LDIGGGASAEVMANGLDVILGDEQVSAVFVNVFGGITACDAVANGIVGALKKLGDAATKP 343

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           LV+RL+G NV+ G  ++A+    ++T  D  D 
Sbjct: 344 LVVRLDGNNVEEGRSILADFAHPLVTQADTMDG 376


>gi|314969859|gb|EFT13957.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL037PA1]
          Length = 391

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVSAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|325962277|ref|YP_004240183.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323468364|gb|ADX72049.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 389

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/403 (34%), Positives = 216/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAYTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S          ILG  +        G  V  V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKSADEAFEHATNILGMDI-------KGHTVKKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + K+ IDP +G+       +       
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   L+  F  +D +L+E+NPL+    G +  LD K+S D+NA +RH    
Sbjct: 163 EELRGKVAAVILKLWDVFKKEDATLVEVNPLVKTGAGEIVALDGKVSLDENAEFRHAKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 LLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD + KGI+ A+ E+    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVAKGIVGALAELGHTANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILNEANHPLVTLAATMDEGADKAAELA 385


>gi|116199357|ref|XP_001225490.1| hypothetical protein CHGG_07834 [Chaetomium globosum CBS 148.51]
 gi|88179113|gb|EAQ86581.1| hypothetical protein CHGG_07834 [Chaetomium globosum CBS 148.51]
          Length = 447

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 154/406 (37%), Positives = 223/406 (54%), Gaps = 18/406 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHEY++  LLR+Y + + KG V ++   AE+  K +     V+K+Q+ AGGRGKG   
Sbjct: 36  LSIHEYRSADLLRQYGIDLPKGSVATTAAEAEAVAKNIGTDDMVIKAQVLAGGRGKGSVS 95

Query: 61  ELPADSKGGVRVESS-------LKSVISDIREILGSTLITKQTGPTGS-RVNCVYVEDGA 112
              A  +    + +            +    +  G    + Q       +V    V  G 
Sbjct: 96  TKRAQGRRARHLLADRGQDVRRPDDRLQAHHQADGRRRPSVQRRLHLRAQVRPARVLPGH 155

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
                                ++S+QGGMDIE VAK+ P  I    ID  +GVT E    
Sbjct: 156 SH----------GPCFARPVIVSSSQGGMDIEGVAKENPDAITTTHIDINVGVTDEIARG 205

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +   L    Q   D  D   NLY  F +KD + +EINPL    + ++  +D+K  FDDNA
Sbjct: 206 IATKLGFSEQCIEDAKDTIKNLYTIFLEKDATQIEINPLSETSDHKVMCMDAKFGFDDNA 265

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            +R  ++ E RD ++ED  E+ A +  L++I LDG+IGC+VNGAGLAMATMDIIKL GG 
Sbjct: 266 DFRQKEVFEWRDTTQEDPEEVRAAEAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQ 325

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGGGA    +  AF++ITSD  V  I +NIFGGI+RCD +  G+++ VK + + 
Sbjct: 326 PANFLDVGGGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKTLDLK 385

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           IP++ RL+G N++  ++LI ESG+ + +  DL  AA++ V   K V
Sbjct: 386 IPIIARLQGTNMEQAHQLINESGMKIFSIDDLQSAAERAVQLSKVV 431


>gi|227875825|ref|ZP_03993951.1| succinyl-CoA synthetase beta chain [Mobiluncus mulieris ATCC 35243]
 gi|227843573|gb|EEJ53756.1| succinyl-CoA synthetase beta chain [Mobiluncus mulieris ATCC 35243]
          Length = 386

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/392 (35%), Positives = 218/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGEAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ I P  G+       +       
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIERLAKEKPEALAKVPI-PRTGMDETLATEITQQAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA YRH +  
Sbjct: 163 PETGSKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARYRHPEHS 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PANF 296
           EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++   G      PANF
Sbjct: 223 ELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYGTRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INIP 354
           LD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ +    N P
Sbjct: 283 LDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILGDSANKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 343 LVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|84497953|ref|ZP_00996750.1| succinyl-CoA synthetase subunit beta [Janibacter sp. HTCC2649]
 gi|84381453|gb|EAP97336.1| succinyl-CoA synthetase subunit beta [Janibacter sp. HTCC2649]
          Length = 392

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/396 (35%), Positives = 217/396 (54%), Gaps = 26/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G V ++   A +A +T+    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDVFEKHGVPVLAGAVATTPEEARAAAETIGAKSGGVTVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  ++         ILG  +        G  V+ V +  GA I  E
Sbjct: 61  ----------GGVKVAKTVDEAQQHAEAILGMDI-------KGHTVHQVMIAQGAQIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DRT+     + S +GGMDIE++A + P+ + K+ +DP +G+ +     + D  
Sbjct: 104 YYFSVLLDRTNRTYLAMCSVEGGMDIEQLAVERPEALAKVAVDPNVGIDTAKAQEIVDTA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L+  + D+D +L+E+NPL+   +G +  LD K++ D+NA +R  
Sbjct: 164 GFDAETGAKIVPVLEKLWLVYRDEDATLVEVNPLVKTTDGDIVALDGKVTLDENADFRQP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG----AP 293
           D   L D +  D  E  AK+ NL+Y+ LDGN+G + NGAGL M+T+D++   G      P
Sbjct: 224 DHLALEDKAAADPLEAAAKEKNLNYVKLDGNVGIIGNGAGLVMSTLDVVAYAGESVGSKP 283

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--I 351
           ANFLD+GGGA  + +A    II  D  VK + +N+FGGI  CD + +GI+ A+  +    
Sbjct: 284 ANFLDIGGGASAEVMANGLGIILGDEQVKAVFVNVFGGITACDEVARGIVGALDTLGDAA 343

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
             PLV+RL+G NVD G R++AE    ++T  +  D 
Sbjct: 344 TKPLVVRLDGNNVDEGRRILAERNHPLVTIEETMDG 379


>gi|289427664|ref|ZP_06429376.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J165]
 gi|295131280|ref|YP_003581943.1| succinate-CoA ligase [ADP-forming], beta subunit [Propionibacterium
           acnes SK137]
 gi|289159155|gb|EFD07347.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J165]
 gi|291376177|gb|ADE00032.1| succinate-CoA ligase [ADP-forming], beta subunit [Propionibacterium
           acnes SK137]
 gi|313763126|gb|EFS34490.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL013PA1]
 gi|313773163|gb|EFS39129.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL074PA1]
 gi|313810355|gb|EFS48069.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL083PA1]
 gi|313812189|gb|EFS49903.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL025PA1]
 gi|313816466|gb|EFS54180.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL059PA1]
 gi|313817908|gb|EFS55622.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL046PA2]
 gi|313819820|gb|EFS57534.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL036PA1]
 gi|313823310|gb|EFS61024.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL036PA2]
 gi|313824785|gb|EFS62499.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL063PA1]
 gi|313828274|gb|EFS65988.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL063PA2]
 gi|313830206|gb|EFS67920.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL007PA1]
 gi|313832959|gb|EFS70673.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL056PA1]
 gi|314914444|gb|EFS78275.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA4]
 gi|314919506|gb|EFS83337.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL050PA3]
 gi|314925814|gb|EFS89645.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL036PA3]
 gi|314930098|gb|EFS93929.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL067PA1]
 gi|314957101|gb|EFT01206.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL027PA1]
 gi|314957691|gb|EFT01794.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL002PA1]
 gi|314960757|gb|EFT04858.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL002PA2]
 gi|314972986|gb|EFT17082.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL053PA1]
 gi|314979800|gb|EFT23894.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL072PA2]
 gi|314984813|gb|EFT28905.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA1]
 gi|314986166|gb|EFT30258.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA2]
 gi|314988778|gb|EFT32869.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL005PA3]
 gi|315079960|gb|EFT51936.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL078PA1]
 gi|315083288|gb|EFT55264.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL027PA2]
 gi|315086939|gb|EFT58915.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL002PA3]
 gi|315090030|gb|EFT62006.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL072PA1]
 gi|315096647|gb|EFT68623.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL038PA1]
 gi|315097876|gb|EFT69852.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL059PA2]
 gi|315100640|gb|EFT72616.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL046PA1]
 gi|315109267|gb|EFT81243.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL030PA2]
 gi|327325063|gb|EGE66869.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL096PA3]
 gi|327325310|gb|EGE67115.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL096PA2]
 gi|327443825|gb|EGE90479.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL043PA1]
 gi|327449137|gb|EGE95791.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL043PA2]
 gi|327449261|gb|EGE95915.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL013PA2]
 gi|327451319|gb|EGE97973.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL087PA3]
 gi|327451775|gb|EGE98429.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL083PA2]
 gi|328752260|gb|EGF65876.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL087PA1]
 gi|328755355|gb|EGF68971.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL025PA2]
 gi|328756394|gb|EGF70010.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL020PA1]
 gi|328761100|gb|EGF74649.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL099PA1]
          Length = 391

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|292656587|ref|YP_003536484.1| succinyl-CoA synthase subunit beta [Haloferax volcanii DS2]
 gi|291371580|gb|ADE03807.1| succinyl-CoA synthase, beta subunit [Haloferax volcanii DS2]
          Length = 381

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 135/399 (33%), Positives = 214/399 (53%), Gaps = 21/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +  +PV +  + SSV     A++ +  P   +K+Q+H GGRGK    
Sbjct: 1   MKLHEYQAKDIFAEAGIPVPESRLASSVEEVMEAVEEIGYP-AAIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +          +ILG  L        G  V+ V VE G D   ELY+
Sbjct: 57  -------GGIKIATDEDEARQAAEDILGMDL-------KGYTVDRVLVEAGVDFENELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+ G    + ST+GG++IEEVA++ P  I +  IDP  G+       +     + 
Sbjct: 103 GVTMDRSEGKPVAMVSTEGGVNIEEVAEENPDAIAREHIDPAFGLHPYQARKVVFEAGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D       LY  +   D S +EINP++I  +  +   D+ ++ DD+AL+RH D+ 
Sbjct: 163 RDVAFDVASFLTTLYDLYESNDASDIEINPVMITSDRDIVAADAVMNIDDDALFRHDDLA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + + E+  E +A ++   Y+ L GN+G + NGAGL M T+D++  +GG PANFLD+G
Sbjct: 223 AMEEDAYENDLEAKAGEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYFGGEPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  ++VA A  ++ SD +V  ++ NIFGGI R D + KGI  A++   +I  P+V+RL
Sbjct: 283 GGAKAERVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGINEALESFDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            G N + G  ++    + V     L+DA Q+ V   + V
Sbjct: 343 AGTNAEEGMEILNTDLVQVE--GTLEDAVQRAVENAQEV 379


>gi|154509659|ref|ZP_02045301.1| hypothetical protein ACTODO_02192 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799293|gb|EDN81713.1| hypothetical protein ACTODO_02192 [Actinomyces odontolyticus ATCC
           17982]
          Length = 395

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/397 (32%), Positives = 215/397 (54%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ + +++ VPV    + S+   A    + L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARQMFKEHGVPVLDYRLASTPEEAREGARELLADGALLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +          ILG  +        G  V  V +  GADI  E
Sbjct: 61  ----------GGVKLAHTADEAYEKAEAILGLDI-------KGHIVKKVMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DP +G+ +E    +    
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPTVGIDAEVARHIAKEA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +       +   L+  + D+D +L+E+NPL+   +G +  +D K++ DDNA +RH 
Sbjct: 164 GFDEETAEAIAPVLETLWTVYRDEDATLVEVNPLVSSPDGSVWAVDGKVTLDDNARFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY-----GGA 292
              EL DV+ +D RE  AK   L+Y+ L+G +G + NGAGL M+T+D++ +      G  
Sbjct: 224 GHAELVDVAAQDPREAAAKAAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAMAGEEFGGMK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-- 350
           PANFLD+GGGA  + +A    II  D  V+ + +N+FGGI  CD + +GI+ A++ +   
Sbjct: 284 PANFLDIGGGASAEVMAKGLDIILGDEQVRSVFVNVFGGITACDQVARGIIGALETLGDA 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            + PLV+RL+G  V+ G  ++AE+   ++   +  D 
Sbjct: 344 ASKPLVVRLDGNKVEEGRAILAEAAHPLVHMEETMDG 380


>gi|116669380|ref|YP_830313.1| succinyl-CoA synthetase subunit beta [Arthrobacter sp. FB24]
 gi|189046879|sp|A0JT43|SUCC_ARTS2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|116609489|gb|ABK02213.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Arthrobacter
           sp. FB24]
          Length = 389

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/403 (35%), Positives = 219/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +    +     ILG  +        G  VN V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P  + K+ IDP +G+       +       
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEQLAVERPDALAKVAIDPAVGIDQAKADEIVAAAGFA 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R    D+   L+  F  +D +L+E+NPL+    G +  LD K++ D+NA +RH    
Sbjct: 163 EELRGKVADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVTLDENADFRHAKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D    D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 LLEDKDAADPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD + KGI+ A+ E+    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVAKGIVGALAELGHSANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTLAATMDEGADKAAELA 385


>gi|306819106|ref|ZP_07452820.1| succinyl-CoA ligase subunit beta [Mobiluncus mulieris ATCC 35239]
 gi|304648082|gb|EFM45393.1| succinyl-CoA ligase subunit beta [Mobiluncus mulieris ATCC 35239]
          Length = 386

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/392 (35%), Positives = 218/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGEAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ I P  G+       +       
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIERLAKEKPEALAKVPI-PRTGMDETLATEITQQAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA YRH +  
Sbjct: 163 PETGSKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARYRHPEHS 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PANF 296
           EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++   G      PANF
Sbjct: 223 ELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYGTRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--IP 354
           LD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ +  N   P
Sbjct: 283 LDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILGDNASKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 343 LVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|256824634|ref|YP_003148594.1| succinyl-CoA synthetase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256688027|gb|ACV05829.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Kytococcus
           sedentarius DSM 20547]
          Length = 394

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/399 (33%), Positives = 217/399 (54%), Gaps = 30/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G V ++   A +A + +    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDMFEKHGVPVLAGEVATTPEEARAAAERIGQKSGGVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V  S +        ILG  +        G  V+ V +  GA I  E
Sbjct: 61  ----------GGVKVVKSPEEAQEAAEAILGMDI-------KGHTVHTVMIAQGAKIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DRT+     + S +GG++IE++A + P+ + ++ IDP +G+     A + +  
Sbjct: 104 YYFSILLDRTNRSYLAMCSKEGGVEIEQLAVERPEALARIEIDPSVGLDDAKAAEIVEAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                ++ +    F  LY  + ++D SL+E+NPL+  ++G +  LD K++ D+N+ +R  
Sbjct: 164 GFTD-SKDELAKTFKTLYTVYTEEDASLVEVNPLVKTEDGEIIALDGKVTLDENSDFRQP 222

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG------- 290
              +L D    D  E +AK   L+Y+ LDGN+G + NGAGL M+T+D++   G       
Sbjct: 223 HHADLEDKEAADPLEAKAKAKGLNYVKLDGNVGIIGNGAGLVMSTLDVVAYAGEDKTGGK 282

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
             PANFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ + 
Sbjct: 283 AKPANFLDIGGGASAQVMADGLDVILGDEQVKSVFVNVFGGITACDAVANGIVQALEMLG 342

Query: 351 --INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
                PLV+RL+G NV+ G +++A++   +++  D  D 
Sbjct: 343 DDATKPLVVRLDGNNVEEGRKILADANHPLVSIADTMDG 381


>gi|319760465|ref|YP_004124403.1| succinyl-CoA ligase subunit beta [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039179|gb|ADV33729.1| succinyl-CoA ligase subunit beta [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 395

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 156/403 (38%), Positives = 237/403 (58%), Gaps = 18/403 (4%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKT--LPGPLYVVKSQIHAGGRGKGRF 59
           N++EYQAK L RK+ +P+ K  + S +   +    +  + GP ++VK QIH+GGRGK   
Sbjct: 3   NLYEYQAKKLFRKFKIPILKNWIFSDISEIKHCTSSVIMDGPPWIVKCQIHSGGRGKA-- 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGV+V +SL+ + S     LG+ LIT QT   G  VN + VE     + E Y
Sbjct: 61  --------GGVKVANSLEDIYSFATHWLGNRLITDQTSKKGDVVNYILVEPAIKFINEFY 112

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            SL +DR S  +  I S +GG+DIE      P  IFK+ IDP++G        L D L L
Sbjct: 113 FSLFIDRDSSQILCIVSVKGGIDIENTINKSPDLIFKISIDPMVGAYPYQGRILADKLNL 172

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G        ++ ++ + F + D++L+EINP II  N  L  LD+K+S D N+ +R  ++
Sbjct: 173 KGIEINKFVQIYIDIVRMFLENDLTLVEINPFIIDNNHNLLCLDAKVSVDSNSFFRQPNL 232

Query: 240 QEL----RDVSEEDSREIE-AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
             L       +  +++ +  ++  +++Y++L GNIGCMVNGAGLAMATMD+IK  GG PA
Sbjct: 233 LSLCLNKHSTNNLNNKLVPLSQDLSINYVSLHGNIGCMVNGAGLAMATMDLIKSLGGEPA 292

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKINI 353
           NFLD+GG  D D + +AF +I   +SVK + +NIFGGI+ CD++  GI++ + K +  ++
Sbjct: 293 NFLDIGGDTDMDSLMSAFTMILKKTSVKAVFVNIFGGIVCCDLVADGIIAVLTKNINNHV 352

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           P+V+RLEG N  +G++ +  S LN+    +L DA    +  VK
Sbjct: 353 PVVIRLEGNNAILGHKKLINSKLNIFVVNNLLDAVHHTIELVK 395


>gi|269977460|ref|ZP_06184432.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mobiluncus mulieris
           28-1]
 gi|269934376|gb|EEZ90938.1| succinyl-CoA ligase [ADP-forming] subunit beta [Mobiluncus mulieris
           28-1]
          Length = 386

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/392 (35%), Positives = 219/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGEAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ I P  G+       +       
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIERLAKEKPEALAKVPI-PRTGMDETLATEITQQAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +  +    +   L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA YRH +  
Sbjct: 163 PETGLKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARYRHPEHS 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PANF 296
           EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++   G      PANF
Sbjct: 223 ELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYGTRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--IP 354
           LD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ +  N   P
Sbjct: 283 LDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILGDNASKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 343 LVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|314917768|gb|EFS81599.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL050PA1]
          Length = 391

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGPPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|256371136|ref|YP_003108960.1| succinyl-CoA synthetase, beta subunit [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256007720|gb|ACU53287.1| succinyl-CoA synthetase, beta subunit [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 382

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/400 (38%), Positives = 240/400 (60%), Gaps = 21/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K L R++ VP ++G V  +V  A +A +TL  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLKEYQGKDLFRRFGVPTSEGRVCVTVEEAVAAAETLGYPV-VVKAQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV ++ +++      ILG  L        G RV  V++E  +DI RE Y 
Sbjct: 57  -------GGVRVAATEEALREAAGAILGMDL-------KGHRVKEVWIEPASDIRREYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  +DRT+     + S  GG+DIEEVA+ +P+ I ++ IDP+ G+T            + 
Sbjct: 103 SFTLDRTARQYLLMLSAMGGVDIEEVARTHPEAIARVHIDPIDGLTPALAEQAVATAGID 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R +   +   LY+AF + D  L+E+NPLI+  +G+L  LD+K++ DD+A +RH + +
Sbjct: 163 EG-REELPAMLGALYRAFVEGDADLVEVNPLIVRSDGKLWALDAKVTLDDSAAFRHPEWE 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             R   E DSRE  A+   L+YI L+G++G + NGAGLAM+T+D+++  GG  ANFLD+G
Sbjct: 222 AYRADEELDSREAIARARGLNYIGLEGSVGIIANGAGLAMSTLDVVQQVGGRAANFLDLG 281

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  D + AA ++I +D  V+ +L+NIFGGI RCD + +GI++A++ V++  P+V+RL+
Sbjct: 282 GGAGADTMTAALEVIATDPQVRALLVNIFGGITRCDEVARGIVAALERVRLPFPMVVRLD 341

Query: 361 GANVDIGNRLIAE-SGLNVITAIDLDDAAQKIV-HAVKGV 398
           G N   G  +++     ++I    +  AA++ V  A K V
Sbjct: 342 GTNAAEGRAILSSVVSDSIIVEPTMIKAAERAVAEASKAV 381


>gi|315106180|gb|EFT78156.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL030PA1]
          Length = 391

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNYPLVTMVSTMDEAASKAAELA 387


>gi|327332324|gb|EGE74060.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL097PA1]
          Length = 391

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/404 (34%), Positives = 215/404 (53%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  SL         ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSLAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|313793368|gb|EFS41426.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA1]
 gi|313800988|gb|EFS42256.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA2]
 gi|313838058|gb|EFS75772.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL086PA1]
 gi|314963432|gb|EFT07532.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL082PA1]
 gi|315077281|gb|EFT49343.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL053PA2]
 gi|327451704|gb|EGE98358.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL092PA1]
          Length = 391

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 213/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA    +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAKIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|158317722|ref|YP_001510230.1| succinyl-CoA synthetase subunit beta [Frankia sp. EAN1pec]
 gi|226734954|sp|A8LAW3|SUCC_FRASN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|158113127|gb|ABW15324.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EAN1pec]
          Length = 388

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/393 (36%), Positives = 213/393 (54%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G + ++   A      L G + VVK+Q+          K
Sbjct: 1   MDLFEYQAKKLFAEHGVPVPTGKIATTPQQAREIATELGGKV-VVKAQV----------K 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V             ILG  +        G  V+ V VE  ++I  E Y 
Sbjct: 50  AGGRGKAGGVKVADGPDDAFEKASAILGMDI-------KGHTVHSVLVEQASNIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + ++ IDPL GV +     +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATNPEALARIHIDPLTGVDAAKAREIAVAAKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A      L   L++ F   D +L+E+NPLI+  +G++  LD K++ D+NA +RH +  
Sbjct: 163 EAAIEGASVLLVKLWEVFVKADATLVEVNPLILTGDGKVIALDGKVTLDENADFRHPENA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
           EL DV+  D  E +AK+  L+Y+ L+G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELVDVAAVDPLEQKAKEKGLNYVKLEGQVGIIGNGAGLVMSTLDVVTYAGEEFGGQRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIP 354
           FLD+GGGA  + +A    II SD SVK + +NIFGGI  CD +  GI+ A+  V  ++ P
Sbjct: 283 FLDIGGGASAEVMANGLSIILSDPSVKSVFVNIFGGITACDAVANGIVQALAIVGDVSTP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           LV+RL+G N + G R++ E+ L V+  +D  D 
Sbjct: 343 LVVRLDGNNAEEGRRILKEANLPVVKPVDTMDG 375


>gi|314982169|gb|EFT26262.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA3]
          Length = 391

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 NSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDRA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKDALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|289425025|ref|ZP_06426804.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes SK187]
 gi|289154724|gb|EFD03410.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes SK187]
          Length = 391

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAGEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|15790522|ref|NP_280346.1| succinyl-CoA synthetase subunit beta [Halobacterium sp. NRC-1]
 gi|10581028|gb|AAG19826.1| succinyl-CoA synthetase beta chain [Halobacterium sp. NRC-1]
          Length = 423

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/396 (32%), Positives = 208/396 (52%), Gaps = 21/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P  +  + +SV  A      L  P+ V K+Q+H GGRGK    
Sbjct: 42  MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYPVAV-KAQVHVGGRGKA--- 97

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +          ILG  L        G  V+ V VE+  D   ELY+
Sbjct: 98  -------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYV 143

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+ G    + S +GG+DIE VA++ P+ I +  +DP  G+ +    +      ++
Sbjct: 144 GVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIE 203

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   +Y  + D D + +EINP+++     +   D+ +  D++AL+R     
Sbjct: 204 QDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQPAFA 263

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ + + ED  E +A ++   Y+ LDGN G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 264 DMEEDAAEDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTTLDLVDYYGGQPANFLDIG 323

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  D+VA A  ++ SD +V  ++ NIFGGI R D + KGI SA+++  +I  P+V+RL
Sbjct: 324 GGAKADRVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGINSALEQFDEIPTPVVVRL 383

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N   G  ++ +  + V     L+ A Q+ V   
Sbjct: 384 AGTNAAEGREILNDDLVTVE--ETLEGAVQRAVEYA 417


>gi|312138582|ref|YP_004005918.1| succinyl-CoA synthetase beta subunit/malate thiokinase [Rhodococcus
           equi 103S]
 gi|325676351|ref|ZP_08156030.1| succinyl-CoA ligase subunit beta [Rhodococcus equi ATCC 33707]
 gi|311887921|emb|CBH47233.1| succinyl-CoA synthetase beta subunit/malate thiokinase [Rhodococcus
           equi 103S]
 gi|325552912|gb|EGD22595.1| succinyl-CoA ligase subunit beta [Rhodococcus equi ATCC 33707]
          Length = 389

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K++VP + G V  +V  A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHDVPTSAGRVTDTVAGAREIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATADDAQTHAENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D  L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDAAAVTIQKLWEVFVKEDALLVEVNPLVRTPDDQILALDGKVTLDANADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALETLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVATMDEAADKAAELA 385


>gi|282855097|ref|ZP_06264429.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J139]
 gi|282581685|gb|EFB87070.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes J139]
 gi|315090400|gb|EFT62376.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL110PA4]
          Length = 391

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 NSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDRA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|134103099|ref|YP_001108760.1| succinyl-CoA synthetase subunit beta [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291003958|ref|ZP_06561931.1| succinyl-CoA synthetase subunit beta [Saccharopolyspora erythraea
           NRRL 2338]
 gi|189081792|sp|A4FP60|SUCC_SACEN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|133915722|emb|CAM05835.1| putative succinyl-CoA synthetase beta subunit [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 389

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/394 (36%), Positives = 218/394 (55%), Gaps = 25/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VP   G V +    A++A + L GP+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKELFASHGVPTLPGSVATDSDGAKAAAEQLGGPV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +     +    ILG  +        G     V +   +DI+ E Y 
Sbjct: 57  -------GGVKLAENPDEAKTKAEAILGLDI-------KGHITRRVLITTASDIVDEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + K+ IDP+ GV       + D  +  
Sbjct: 103 SFLLDRANRNFLAMASVEGGMEIEEVAATKPEALAKIAIDPIQGVDEAKAREIVDAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L++ F  +D +L+EINPL+    G++  LD K++ D+NA +R     
Sbjct: 163 AEIADQVVEVVVKLWETFVAEDATLVEINPLVKDPQGKIIALDGKVTLDENASFRQPKQA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII-----KLYGGAPAN 295
           EL D   ED  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++     K  G  PAN
Sbjct: 223 ELVDKDAEDPLEAKAKAKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D +VK + +N+FGGI  CD +  GI+ A+K +  +   
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDPAVKSVFVNVFGGITACDAVANGIVQALKILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           PLV+RL+G NV+ G R++AE+    +T +D  D 
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPAVTMVDTMDG 376


>gi|320095657|ref|ZP_08027313.1| succinate--CoA ligase (ADP-forming) subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319977378|gb|EFW09065.1| succinate--CoA ligase (ADP-forming) subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 392

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/396 (33%), Positives = 217/396 (54%), Gaps = 26/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L RK+ VPV    + ++   A  A + L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARELFRKHGVPVLDFELATTPGQARDAAERLLGAGASLLVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  +          ILG  +        G  V  + +  GADI  E
Sbjct: 61  ----------GGVKLARTPDEAREKAEAILGLDI-------KGHVVERLMIASGADIAAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR++     + S +GGMDIE +AK+ P+ + ++ +DP +G+ ++    + D  
Sbjct: 104 YYFSILLDRSNRRHLAMCSREGGMDIETLAKERPEALARVPLDPAVGIDADVARRIVDEA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                A      +   L++ + D+D +L+E+NPL+   +G +  +D K++ DDNA +RH 
Sbjct: 164 GFDRAAGEAIAPVLRTLWEVYRDEDATLVEVNPLVASPDGSIWAVDGKVTLDDNARFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG----GAP 293
              +L D + +D RE  AK+  L+Y+ L+G +G + NGAGL M+T+D++ + G      P
Sbjct: 224 AHADLVDAAAQDPREAAAKEAGLNYVRLEGQVGVIGNGAGLVMSTLDVVAMAGEDLRMRP 283

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--I 351
           ANFLD+GGGA    +A    II  D  V+ + +N+FGGI  CD + +GIL A++E+    
Sbjct: 284 ANFLDIGGGASAAVMAKGLGIILGDEQVRSVFVNVFGGITACDEVARGILGALEELGGAA 343

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           + PLV+RL+G  V  G  ++A +G  ++   +  D 
Sbjct: 344 SKPLVVRLDGNKVAEGRAILAAAGHPLVHLEETMDG 379


>gi|313808728|gb|EFS47182.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL087PA2]
          Length = 391

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/404 (33%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ + V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKMMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|332669627|ref|YP_004452635.1| succinyl-CoA synthetase subunit beta [Cellulomonas fimi ATCC 484]
 gi|332338665|gb|AEE45248.1| succinyl-CoA synthetase, beta subunit [Cellulomonas fimi ATCC 484]
          Length = 393

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/397 (35%), Positives = 222/397 (55%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G+V ++   A  A   L    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGIVATTPDEAREAATRLLPAEGGVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S         EILG  +        G  V+ V +  GA I +E
Sbjct: 61  ----------GGVKLARSADEAAEKAGEILGMDI-------KGHTVHRVMIAAGAKIAQE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y SLL+DR       +AS +GGM+IE++A + P+ + ++ +DP  G+       +    
Sbjct: 104 FYFSLLLDRAERRYLAMASVEGGMEIEQLAVERPEALARVAVDPRTGIDQAKADEIVAAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +   +  D+   L+  + D+D +L+E+NPL++ ++G +  LD K++ D NA +RH 
Sbjct: 164 GFAPEIAGEVADVLQKLWLVYRDEDATLVEVNPLVLTEDGEVVALDGKVTLDANADFRHA 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----A 292
           D + L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 224 DHEALEDKAAADPLEARAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA  + +AA   II +D  VK + +N+FGGI  CD +  GI++A++ +  +
Sbjct: 284 PANFLDIGGGASAEVMAAGLDIILTDPQVKSVFVNVFGGITACDAVANGIVAALEILGDE 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            + PLV+RL+G NV  G R++A++G  ++T  D  D 
Sbjct: 344 ASKPLVVRLDGNNVLEGRRILADAGHPLVTLADTMDG 380


>gi|326383703|ref|ZP_08205388.1| succinyl-CoA synthetase subunit beta [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197467|gb|EGD54656.1| succinyl-CoA synthetase subunit beta [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 387

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/403 (32%), Positives = 216/403 (53%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A +  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTTPGRVTDTAADARAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAQTHAENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P ++ ++ +D + GV       + +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLARIAVDAVKGVDLAFAREIAEKGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFVAEDATLVEVNPLVRTPDDQILALDGKVTLDENAEFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFADKDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  DS VK + +N+FGGI  CD +  GI+ A+ ++    + 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVGALAKLGDAASK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G +++A++   ++T A  +D  A K     
Sbjct: 343 PLVVRLDGNKVEEGRKILADANHPLVTLADTMDSGADKAAELA 385


>gi|255326666|ref|ZP_05367742.1| succinyl-CoA synthetase beta chain [Rothia mucilaginosa ATCC 25296]
 gi|255295883|gb|EET75224.1| succinyl-CoA synthetase beta chain [Rothia mucilaginosa ATCC 25296]
          Length = 388

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/403 (35%), Positives = 225/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV KG+V ++   A++A + + G L V+K+Q+  GGRGK    
Sbjct: 1   MDLFEYQARELFAKHGVPVLKGIVATTPEEAKAAAEEIGG-LTVIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S        + ILG  +        G  V+ V V DGADI  E Y 
Sbjct: 57  -------GGVKLAKSPDEAYEHAKAILGMDI-------KGHTVHRVLVADGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLL+DR +     + S +GGM+IE++A + P+ + K+ +DPL+G+       +       
Sbjct: 103 SLLLDRANRSYLAMCSVEGGMEIEQLAAERPEALAKIEVDPLVGLDQAKAEEIAKAAGFS 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +     +   L + +  +D +L+E+NPL++   G +  LD K+S DDNA +R  + +
Sbjct: 163 AELQEKVVPVLVKLGEVYTKEDATLVEVNPLVLTPEGTILALDGKVSLDDNAEFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D S E+  E +AKQ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDKSAENPLEAKAKQFDLNYVKLDGEVGIVGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA  +II  D  VK + +N+FGGI  CD +  GI+ A++ +      
Sbjct: 283 FLDIGGGASAEVMAAGLEIILGDEQVKSVFVNVFGGITACDAVADGIVKALEILGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV  G R+++E+   ++  A  +D  A K     
Sbjct: 343 PLVVRLDGNNVAEGRRILSEANHPLVVLAETMDSGADKAAELA 385


>gi|115377066|ref|ZP_01464282.1| succinyl-CoA synthetase beta chain [Stigmatella aurantiaca DW4/3-1]
 gi|115365905|gb|EAU64924.1| succinyl-CoA synthetase beta chain [Stigmatella aurantiaca DW4/3-1]
          Length = 308

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/308 (51%), Positives = 222/308 (72%)

Query: 89  STLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAK 148
             L T QTGP G  V+ VY+E+G  I +ELYL + +DR +  + F+AS +GG++IEEVA 
Sbjct: 1   MKLKTIQTGPEGQTVHKVYIEEGLAIGQELYLGVTLDRATSRITFMASREGGVEIEEVAA 60

Query: 149 DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI 208
            +P+KI +  +DP +G        L   L L G            LYK + + D +L+EI
Sbjct: 61  QHPEKILREAVDPAVGFLDFQGRKLAFGLGLSGPTVNKFVQFCSALYKMYTETDAALVEI 120

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
           NPL+I+K+G +  LD+K++FD+NAL++H ++   RD++EE+ RE +AK+ +L+YIALDGN
Sbjct: 121 NPLVILKDGGVVALDAKVTFDENALFKHKELLNYRDLAEEEPRETQAKEFDLAYIALDGN 180

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           IGCMVNGAGLAMATMD IKL GG PANFLDVGGGA ++KV AAFK+I +D +VK +L+NI
Sbjct: 181 IGCMVNGAGLAMATMDTIKLVGGNPANFLDVGGGASKEKVTAAFKLILADPAVKAVLVNI 240

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           FGGIM+CDV+ +GI++A KEV++ +PLV+RLEG NV+ G +L++ SGL +  A +L  AA
Sbjct: 241 FGGIMKCDVIAEGIIAAAKEVQLKVPLVVRLEGTNVEKGKQLLSNSGLAITPADNLRQAA 300

Query: 389 QKIVHAVK 396
           +K V A+K
Sbjct: 301 EKAVAAIK 308


>gi|329938123|ref|ZP_08287574.1| succinyl-CoA synthetase subunit beta [Streptomyces
           griseoaurantiacus M045]
 gi|329302612|gb|EGG46502.1| succinyl-CoA synthetase subunit beta [Streptomyces
           griseoaurantiacus M045]
          Length = 393

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/407 (35%), Positives = 225/407 (55%), Gaps = 30/407 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAAREITERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ +S    ++   +ILG  +        G  VN V + +   +I+ E Y
Sbjct: 57  -------GGVKLAASADEAVARATDILGMDI-------KGHTVNKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GG++IEEVA   P+ + K  ID + GVT E    + +  + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGVEIEEVAATRPEAVAKTPIDAIDGVTPEKAREIVEAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH D 
Sbjct: 163 PAEVADQVANVLVKLWDTFIKEDALLVEVNPLAKVASGEVIALDGKVSLDDNAEFRHPDF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELHDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+K ++    
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            ++ PLV+RL+G N ++G +++ ++G  ++     +D AA K     
Sbjct: 343 NVSKPLVVRLDGNNAELGRKILTDAGHPLVQRVDTMDGAADKAAELA 389


>gi|326771947|ref|ZP_08231232.1| succinyl-CoA synthetase, beta subunit [Actinomyces viscosus C505]
 gi|326638080|gb|EGE38981.1| succinyl-CoA synthetase, beta subunit [Actinomyces viscosus C505]
          Length = 401

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/405 (34%), Positives = 231/405 (57%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARNLFRQHGVPVLDGAVATTPEEARSAAQSLLDAGSELVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  + +   +  R+ILG  +        G  V  V + DG D+  E
Sbjct: 61  ----------GGVKLARTAEEAEARARDILGMDI-------KGHTVRAVLISDGVDLDAE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR       + S +GGMDIE +A + P+ + ++ IDPL G+T      + +  
Sbjct: 104 YYFSILLDRAERQYLAMCSREGGMDIETLAVERPEALARIGIDPLEGITPAVSHRIVEAA 163

Query: 178 ELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
             + G    +   +   L++ F  +D +L+E+NPL+   +GR+  LD K++ DDN+ +RH
Sbjct: 164 GFEAGPLADEVAAVIERLWEVFTAEDATLVEVNPLVKAADGRIIALDGKVTLDDNSRFRH 223

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK-----LYGG 291
               EL D +  D  E  A++  L+Y+ L+G +G + NGAGL M+T+D++        G 
Sbjct: 224 PAHAELVDNAATDPLEARAREAGLNYVRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGM 283

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-K 350
            PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  CD + +GI++AV+ +  
Sbjct: 284 KPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITSCDTVAQGIVTAVESLGG 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +  P+V+RL+G N D G  ++A++ +  +T +D  D A  +V A+
Sbjct: 344 LPKPVVVRLDGNNADTGRAILADAAIEGVTVVDTMDGAADVVTAI 388


>gi|291298133|ref|YP_003509411.1| succinyl-CoA synthetase subunit beta [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567353|gb|ADD40318.1| succinyl-CoA synthetase, beta subunit [Stackebrandtia nassauensis
           DSM 44728]
          Length = 392

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/397 (35%), Positives = 220/397 (55%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ +AL  ++ VPV  G V  +V  A      L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRALFARHGVPVLDGGVAETVEEAVELAGKLDGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  ++         ILG  +        G  V+ V +   ADI  E Y 
Sbjct: 57  -------GGVKLADNVDEAREHATNILGMDI-------KGHTVHKVMLTVTADIDTEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAST+GG++IE+VA + P K+ KL I+ L GV +     + D     
Sbjct: 103 SFLLDRANRTFLCIASTEGGVEIEQVAAETPDKVLKLPINALTGVDATVAGEIADKAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    D+F  L++ F  +D +L+E+NPL+    GR   LD+K++ D+NA +RHLD  
Sbjct: 163 ADLRPQLVDMFVKLWETFVSEDATLVEVNPLVRTPEGRALALDAKVTLDENAAFRHLDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELEDKAAVDPLEQRAKEADLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHDNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A+  +++ SD +VK + +N+FGGI  CD +  GI+ A+     +   
Sbjct: 283 FLDIGGGASAAVMASGLEVVLSDPAVKSVFVNVFGGITACDEVANGIVGALTMLAERGET 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++ PLV+RL+G N ++G  ++  +   ++T +D  D 
Sbjct: 343 VDKPLVVRLDGNNAELGRSILDGANHPLVTRVDTMDG 379


>gi|50843215|ref|YP_056442.1| succinyl-CoA synthetase subunit beta [Propionibacterium acnes
           KPA171202]
 gi|81611260|sp|Q6A6Y0|SUCC_PROAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|50840817|gb|AAT83484.1| succinyl-CoA synthetase beta subunit [Propionibacterium acnes
           KPA171202]
          Length = 391

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSAAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNYPLVTMVSTMDEAASKAAELA 387


>gi|226356091|ref|YP_002785831.1| succinyl-CoA synthetase subunit beta [Deinococcus deserti VCD115]
 gi|259511778|sp|C1CV60|SUCC_DEIDV RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226318081|gb|ACO46077.1| putative succinate--CoA ligase (succinyl-CoA synthetase) beta
           subunit [Deinococcus deserti VCD115]
          Length = 385

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/381 (36%), Positives = 205/381 (53%), Gaps = 21/381 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K +LR++ V V  G V  +        +    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKEILRQFGVNVQDGKVARTPDEVRQIAREYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--EL 118
                  GGV+   +      +  +ILG  +        G  VN V V    DI    E 
Sbjct: 57  -------GGVKFSPTEDKAFENGEKILGMDI-------KGLTVNKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI K  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSFTLMASAEGGMEIEEVAAATPEKIIKHRVDPVTGLRPYEAREVAIRAG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G       D+   + +A   +D  L+EINPL +  +G    LD+K   DDNA+YRH D
Sbjct: 163 FKGNL-NKIADMMVKMSEAALKRDAVLVEINPLFVGPDGVPLALDTKFEIDDNAMYRHQD 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           + + R++  E   EIEA ++  +Y+ LDGN+G + NGAG+ M ++D++   G  PANFLD
Sbjct: 222 LADWRELEAEHPLEIEASKYGFAYVKLDGNVGVLGNGAGIVMTSLDVVNRAGAKPANFLD 281

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA  + V  A K+++ DS VK I INIFGGI R D + KG++ A+K+  +  P+ MR
Sbjct: 282 IGGGAKAEVVYNAVKLVSKDSDVKAIFINIFGGITRADEVAKGVIQALKDGILTKPVRMR 341

Query: 359 LEGANVDIGNRLIAESGLNVI 379
           + G   D    L+AE    +I
Sbjct: 342 IAGTAEDEAKALLAEVNSPLI 362


>gi|121704545|ref|XP_001270536.1| succinyl-CoA synthetase beta chain [Aspergillus clavatus NRRL 1]
 gi|119398681|gb|EAW09110.1| succinyl-CoA synthetase beta chain [Aspergillus clavatus NRRL 1]
          Length = 385

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/385 (39%), Positives = 217/385 (56%), Gaps = 9/385 (2%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            Y++PV KG V+++   A S +  +  P  V+KSQI AGGRGKGRF    +D K G+R+ 
Sbjct: 6   SYSIPVPKGFVVTTPEDARSVVSLINAPS-VLKSQILAGGRGKGRF---GSDGKSGIRIV 61

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
           ++      +  ++LG  L TKQT P G  V  +Y+    DI  E YL+L  DR       
Sbjct: 62  NTPNKAYENAAKMLGYYLTTKQTPPGGLLVKKLYIYKAVDIEHEFYLALTFDRERYCPVI 121

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPN 193
           + S QGG+D+E        ++ K       GVT++ +  +   +            +   
Sbjct: 122 LISDQGGVDVES----SQDQLHKFWFSLSKGVTTDILTKIQREIHFTEAEMKTIQHIVQQ 177

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           + K F +KD  LLE+NPL+    G    LD+K  FDD A +R  DI    +   +   E 
Sbjct: 178 MVKLFQEKDAILLELNPLVRTPKGTFVSLDAKFDFDDAARFRQPDIFSKEEYMPDQRDEY 237

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           EAK+H L YI LDGNIG +VNGAGLAMAT D+I L+GG  ANFLD+GG A  D +  AF+
Sbjct: 238 EAKEHGLVYIRLDGNIGNIVNGAGLAMATNDLINLHGGKSANFLDIGGKATTDTLLEAFE 297

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLIA 372
           I+T D  V+ I INIFGGI+RCD++ + IL A   +    +P+V+RL+G N +   R++A
Sbjct: 298 ILTRDPRVQAIFINIFGGIVRCDMIAESILEAASVLGGFKVPVVVRLQGTNSEQALRMLA 357

Query: 373 ESGLNVITAIDLDDAAQKIVHAVKG 397
           ESG+++ T  D + AA+ I+    G
Sbjct: 358 ESGVDIHTDTDFEGAARDIIRLASG 382


>gi|226307916|ref|YP_002767876.1| succinyl-CoA synthetase beta subunit [Rhodococcus erythropolis PR4]
 gi|259511789|sp|C1A3F2|SUCC_RHOE4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226187033|dbj|BAH35137.1| succinyl-CoA synthetase beta subunit [Rhodococcus erythropolis PR4]
          Length = 389

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/403 (33%), Positives = 223/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTSAGRVTDTVAGAREIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+    + + +++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSPDVDAAVANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F ++D  L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFINEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFEDRDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVATMDEAADKAAELA 385


>gi|307700250|ref|ZP_07637290.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris FB024-16]
 gi|307614461|gb|EFN93690.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris FB024-16]
          Length = 386

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/392 (35%), Positives = 218/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L  K  VPV +G+V S+   A +A + L   L VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKGLFAKNGVPVQRGIVASTPAEASAAYRELGAELAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S     +  + ILG  +        G  V+ V + +G DI RE Y 
Sbjct: 58  -------GGVKLARSAGKAETMAQNILGMDI-------KGHPVHRVLIAEGVDIEREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG++IE +AK+ P+ + K+ I P  G+       +       
Sbjct: 104 SILLDRANRQNLAMCSVEGGVEIERLAKEKPEALAKVPI-PRTGMDETLATEITQQAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   L++ + D+D +L+E+NPL+    G +  LD+K++ DDNA YRH +  
Sbjct: 163 PETGSKVVPVILKLWQTYVDEDATLVEVNPLVQTPAGDIIALDAKVTLDDNARYRHPEHS 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PANF 296
           EL D  + D RE++A++  L+Y+ LDG +G + NGAGL M+T+D++   G      PANF
Sbjct: 223 ELVDQKDADQRELKAQEAGLNYVRLDGQVGIVGNGAGLVMSTLDVVAYAGEKYGTRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--IP 354
           LD+GGGA  + +A   ++I +D  VK   +N+FGGI  CD + KGIL A++ +  N   P
Sbjct: 283 LDIGGGASAEVMAKGLEVILTDPQVKSCFVNVFGGITACDEVAKGILGALEILGDNASKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V  G  ++  +   +IT +   D
Sbjct: 343 LVVRLDGNKVSEGRDILGTANHPLITMVQTMD 374


>gi|314975497|gb|EFT19592.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL045PA1]
          Length = 399

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 213/403 (52%), Gaps = 26/403 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK     
Sbjct: 10  DLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA---- 65

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  S          ILG  +        G  V+ V V +GADI  E Y S
Sbjct: 66  ------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFS 112

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +        
Sbjct: 113 ILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPD 172

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
             +         L++ + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D   
Sbjct: 173 SEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHAG 232

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APAN 295
           L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APAN
Sbjct: 233 LVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPAN 292

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--I 353
           FLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++      
Sbjct: 293 FLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAVK 352

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 353 PLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 395


>gi|300710740|ref|YP_003736554.1| succinyl-CoA synthetase subunit beta [Halalkalicoccus jeotgali B3]
 gi|299124423|gb|ADJ14762.1| succinyl-CoA synthetase subunit beta [Halalkalicoccus jeotgali B3]
          Length = 381

 Score =  368 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 131/399 (32%), Positives = 216/399 (54%), Gaps = 21/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK++     +P     +  S     SA +++  P+ V K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKSVFADAGIPTPDSQLAESTEEVLSAAESVGYPVAV-KAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +  + +        ILG  L        G  V  V VE+  D + ELY+
Sbjct: 57  -------GGIELVENDEEAREAADSILGMDL-------KGYTVERVLVEEAVDFVDELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + S +GG++IEEVA++ P  I +  +DP  G+       +     + 
Sbjct: 103 GVTMDRGEGKPVAMVSRKGGVNIEEVAEEDPDAIAREHVDPAFGLQPYQARRVVYDAGID 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   L+  + D+D S  EINPL++  +G +   D+ ++ D++AL+R  ++ 
Sbjct: 163 REVAGDVSSVLTTLFSLWDDRDASDTEINPLMVTSDGEVIAADAVMNIDEDALFRQAELA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + S  D  E +A ++   Y+ L+G++G + NGAGL M T+D++  YGG PANFLDVG
Sbjct: 223 EMEEESYTDDLERKAGEYGFDYVRLEGDVGIIGNGAGLVMTTLDLVDYYGGEPANFLDVG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  D++A A  ++ SD +V+ ++ NIFGGI R D + KGI +A+++  +I  P+V+RL
Sbjct: 283 GGAKADRIANALDMVFSDENVESVVFNIFGGITRGDEVAKGINNALEQFDEIPKPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            G N + G  ++  + L V     L++A Q+ V   + V
Sbjct: 343 AGTNAEEGMEIL-NADL-VQVEQTLEEAVQRAVENAQEV 379


>gi|110668756|ref|YP_658567.1| succinyl-CoA synthetase subunit beta [Haloquadratum walsbyi DSM
           16790]
 gi|109626503|emb|CAJ52965.1| succinate--CoA ligase beta subunit (ADP-forming) [Haloquadratum
           walsbyi DSM 16790]
          Length = 381

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 132/399 (33%), Positives = 210/399 (52%), Gaps = 21/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK L     +PV      +S     +A++ +  P   +K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKELFADAGIPVPDSQRATSSDEVLTAVEDIGYP-AAIKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++    +   +   EILG  +        G  VN V VE   D   ELY+
Sbjct: 57  -------GGIKIAGDKQEAKAYAEEILGMEI-------KGYTVNSVLVEASVDFENELYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+SG    + ST+GG+DIE VA + P  I +  IDP+ G+             + 
Sbjct: 103 GITMDRSSGKPVAMVSTEGGVDIESVAAETPDAIAREHIDPVFGLHPYQARRAVYDAGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY  +   D S +EINP++I  +  +   D+ ++ D++AL+R  ++ 
Sbjct: 163 SDVASDVAHILSTLYTQYESADASEIEINPVMITTDRDVVAADAVMNIDEDALFRQPELA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D +  D  EI+A ++   Y+ LDG++G + NGAGL M T+D++  YGG+PANFLD+G
Sbjct: 223 SMEDTAAGDDLEIKADEYGFDYVRLDGDVGIIGNGAGLVMTTLDLVDYYGGSPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRL 359
           GGA  ++VA A  ++ +D +V  I+ NIFGGI R D +  GI  A+++   I   +V+RL
Sbjct: 283 GGAKAERVANALDMVFTDDNVDAIVFNIFGGITRGDEVATGINEALEKFDTIPKDVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            G N + G  ++    + V     L+DA ++ V   + V
Sbjct: 343 AGTNAEEGMEILNTDRVEVEA--TLEDAVEQAVINAQEV 379


>gi|169628151|ref|YP_001701800.1| succinyl-CoA synthetase subunit beta [Mycobacterium abscessus ATCC
           19977]
 gi|226734963|sp|B1MJJ0|SUCC_MYCA9 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|169240118|emb|CAM61146.1| Succinyl-CoA synthetase, beta chain [Mycobacterium abscessus]
          Length = 389

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 127/393 (32%), Positives = 212/393 (53%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V ++   A++  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPTTPGRVTTTAEDAKAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++    ++  + ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDALTHAQNILGLDI-------KGHIVKKILVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GG++IE  A++ P  + K+ +D + GV       + +  +L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGVEIEVTAEENPDALAKVPVDAVKGVDLALAREIAEKGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D NA +R     
Sbjct: 163 AEVLDSAAVTIQKLWEVFVGEDATLVEVNPLVRTPDNQILALDGKVTLDGNADFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+H+L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDKDATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--I 353
           FLD+GGGA  + +AA   +I  DS VK + +N+FGGI  CD +  GI+ A+K +      
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDSQVKSVFVNVFGGITACDAVANGIVGALKTLGNTASK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G  V+ G  ++AE    ++   +  D
Sbjct: 343 PLVVRLDGNKVEEGRAILAEFNHPLVIQAETMD 375


>gi|229495126|ref|ZP_04388872.1| succinyl-CoA synthetase beta chain [Rhodococcus erythropolis SK121]
 gi|229318057|gb|EEN83932.1| succinyl-CoA synthetase beta chain [Rhodococcus erythropolis SK121]
          Length = 389

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 134/403 (33%), Positives = 222/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTSAGRVTDTVAGAREIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+    + + +++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSPDVDAAVANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D  L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFIGEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFEDRDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAAVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTVVATMDEAADKAAELA 385


>gi|289596661|ref|YP_003483357.1| succinyl-CoA synthetase, beta subunit [Aciduliprofundum boonei
           T469]
 gi|289534448|gb|ADD08795.1| succinyl-CoA synthetase, beta subunit [Aciduliprofundum boonei
           T469]
          Length = 368

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 142/397 (35%), Positives = 219/397 (55%), Gaps = 31/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EYQ KAL RK+ VP  +G V          IK   G   V+K+Q+  GGRGK    
Sbjct: 1   MNLYEYQGKALFRKFGVPTPEGYVAFKPED----IKEFEGER-VIKAQVLTGGRGKS--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  SSL+      R+IL   +        G +V+ V VE+   I +E Y+
Sbjct: 53  -------GGVKFASSLEEARELARQILAMEI-------KGHKVHAVLVEEKLKIEKEFYV 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     +AS +GG++IE V     +KI+K +++P IGV       L   +   
Sbjct: 99  SILIDRSTRSPLIMASPEGGVEIESVPD---EKIYKFVVNPEIGVQPFVGRLLSKKMGFT 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +  NLY  F + D  L+EINPL++   G+L   DSK+  D ++LYRH D++
Sbjct: 156 GDLAKQFTKILMNLYHMFREYDAELVEINPLVL-SEGKLIAADSKVVIDTDSLYRHKDLE 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  +  E+   E+EA +   +++ LDGN+G + NGAGL MAT+D + LYG  P NFLD+G
Sbjct: 215 E--NAEEKTPLELEANKAGYAFVELDGNVGVIANGAGLTMATLDTLLLYGLKPRNFLDLG 272

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    D    AF  +   ++   IL+NIFGG+ +CD + +GI++A     IN+P+V+RL 
Sbjct: 273 GTDSVDITKNAFTYVLK-ANPDAILVNIFGGVTKCDTVAQGIIAAKDAFNINLPIVVRLS 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G + + G +++ E G  +    D+  A +K+   ++G
Sbjct: 332 GVHEEEGRKMLEEKG--IHAFADMRHAIEKLKSIMEG 366


>gi|315655662|ref|ZP_07908560.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii ATCC 51333]
 gi|315489726|gb|EFU79353.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii ATCC 51333]
          Length = 386

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 139/392 (35%), Positives = 220/392 (56%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  G V S+V   ++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGVPVLPGKVASTVEEVKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++   ++ + ILG  +        G  V  V V  GADI RE Y 
Sbjct: 58  -------GGVKLARSVEEAAANAQAILGMNI-------KGHTVYRVMVVAGADIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+       + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALVKVPI-PASGMDVTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 PETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   ++T ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLVTMMETMD 374


>gi|88855831|ref|ZP_01130494.1| succinyl-CoA synthetase subunit beta [marine actinobacterium
           PHSC20C1]
 gi|88815155|gb|EAR25014.1| succinyl-CoA synthetase subunit beta [marine actinobacterium
           PHSC20C1]
          Length = 389

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 222/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   Y VPV  G++  +   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDVFESYGVPVLAGLIADTPEEAKAAAEKIGGTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +     +   +ILG  +        G  V  V +  GA I +E Y 
Sbjct: 57  -------GGVKVVHNADDAFAAAEQILGLDI-------NGHTVKRVMIAAGARIAQEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG++IE +A + P+ + K+ I+PL G+       +    +  
Sbjct: 103 SVLLDRANRSYLSLCSVEGGVEIEVLAVERPEALAKIEINPLTGIDLAKATEIAIAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  LY  +  +D +L+E+NPL+I ++G +  LD K+S D+NA +RH    
Sbjct: 163 AELVDKVAPVFVKLYDVYKGEDATLVEVNPLVITEDGDIVALDGKVSLDENAEFRHPKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E +AK + L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 SLEDAAAANPLEAKAKANGLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD + KGI+ A+ E+    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDPQVKSVFVNVFGGITACDAVAKGIVGALAELGSAANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G  ++AE+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNKVEEGRAILAEANHPLVTLAASMDEGADKAAELA 385


>gi|50955504|ref|YP_062792.1| succinyl-CoA synthetase subunit beta [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|81390603|sp|Q6AD57|SUCC_LEIXX RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|50951986|gb|AAT89687.1| succinyl-CoA synthetase, beta chain [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 387

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 223/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  KY VPV  G+V  +     +A + L G + VVK+Q+          K
Sbjct: 1   MDLYEYQARDLFEKYGVPVLPGIVADTPEEVRAAAEKLGG-VNVVKAQV----------K 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +        + ILG  +        G  V  V V  GA I RE Y 
Sbjct: 50  TGGRGKVGGVKVAKNPDEAEEAAKAILGLDI-------KGHVVRRVMVSGGARIAREFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++A + P+ + ++ +DP+ GV +     +       
Sbjct: 103 SVLLDRANRSYLSLTSVEGGMEIEQLAVEKPEALARIGVDPIAGVDTTKATEIARAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+F  LY  +  +D +L+E+NPL++ + G +  LD K++ D+NA +RH + +
Sbjct: 163 EELVSKVADVFVKLYDVYKGEDATLVEVNPLVLTEEGEVIALDGKVTLDENAGFRHPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  D  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELEDKAAADPLEAKAKEADLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGERHKGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I +D  VK + +N+FGGI  CD +  GI+ A++ +    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDPQVKSVFVNVFGGITACDAVANGIVKALEILGGDANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ ++   ++T A+ +D+ A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTDANHPLVTLALTMDEGADKAAELA 385


>gi|15826978|ref|NP_301241.1| succinyl-CoA synthetase subunit beta [Mycobacterium leprae TN]
 gi|221229456|ref|YP_002502872.1| succinyl-CoA synthetase subunit beta [Mycobacterium leprae Br4923]
 gi|21264063|sp|Q9Z5H8|SUCC_MYCLE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|254778445|sp|B8ZU00|SUCC_MYCLB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|4455691|emb|CAB36665.1| probable succinyl-CoA synthetase beta subunit [Mycobacterium
           leprae]
 gi|13092525|emb|CAC29663.1| succinyl-CoA synthase [beta] chain [Mycobacterium leprae]
 gi|219932563|emb|CAR70248.1| succinyl-CoA synthase [beta] chain [Mycobacterium leprae Br4923]
          Length = 393

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 141/410 (34%), Positives = 218/410 (53%), Gaps = 32/410 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP  +G V  S   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPGIQGRVTDSAEGAKTIAMEIGRPVMV-KAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPEEAYQQAKNILGLDI-------KGHIVKKLLVVEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+     L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLACARSIAQQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK------NGRLRVLDSKISFDDNALY 234
            +           L++ F  +D +L+E+NPL+         +G++  LD K++ D NA +
Sbjct: 163 AEVLDAAAATIAKLWELFVAEDATLVEVNPLVRTPSRGYGSSGKILALDGKVTLDANARF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           R     E  D +  D  E +AKQHNL+YI LDG +G + NGAGL M+T D++   G    
Sbjct: 223 RQPGHAEFEDRAATDPLEWKAKQHNLNYIKLDGEVGIIGNGAGLTMSTFDVVAYAGEQHG 282

Query: 292 --APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
              PANFLD+GGGA  + +AA+  ++  D  VK + +NIFGGI  CD +  GI+ A++ +
Sbjct: 283 GVKPANFLDIGGGASAEVMAASLDVVLGDVQVKSVFVNIFGGITTCDTVATGIVKALEIL 342

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAVK 396
             + N PLV+RL+G NV  G R++AE+   ++     +D+AA K     +
Sbjct: 343 GDEANKPLVVRLDGNNVGEGRRILAEANHPLVMLVPTMDEAANKAAELAR 392


>gi|302544604|ref|ZP_07296946.1| succinyl-CoA synthetase, beta subunit [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302462222|gb|EFL25315.1| succinyl-CoA synthetase, beta subunit [Streptomyces himastatinicus
           ATCC 53653]
          Length = 390

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 137/397 (34%), Positives = 217/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI++  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVINTPEAAREVAERLGG-RAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPADAVEKANQILGMDI-------KGHTVHKVMLAQTADIKEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA+  P  + K+ +D + GVT E  A +    +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGVEIEVVAEQNPDALAKIPVDAIEGVTPEKAAEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L+  F  +D  L+E+NPL+   +G++  LD K++ D NA +R  +  
Sbjct: 163 AEIADQVADVLQQLWTVFIKEDALLVEVNPLVKTGDGKIIALDGKVTLDANAEFRQPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           EL D +  +  E  AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ELEDKAAANPLEAAAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGED 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++ PLV+RL+G N ++G +++ ++   ++  +D  D 
Sbjct: 343 VSKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMDG 379


>gi|312199954|ref|YP_004020015.1| succinyl-CoA synthetase, subunit beta [Frankia sp. EuI1c]
 gi|311231290|gb|ADP84145.1| succinyl-CoA synthetase, beta subunit [Frankia sp. EuI1c]
          Length = 388

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 145/393 (36%), Positives = 211/393 (53%), Gaps = 24/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL  ++ VPV  G   ++   A +    L G + VVK+Q+          K
Sbjct: 1   MDLFEYQAKALFAEHGVPVPTGKTAATPEEARAIAAELGGKV-VVKAQV----------K 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V             ILG  +        G  V+ V VE  ++I  E Y 
Sbjct: 50  AGGRGKAGGVKVADGPDDAFEKASAILGMDI-------KGHTVHSVLVEQASNIAEEYYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IEEVA   P+ + ++ IDPL GV       +    +L 
Sbjct: 103 SFLLDRANRTFLAMASREGGMEIEEVAATKPEALARIHIDPLAGVDLAKAREIAVAAKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A     +L   L++ F   D +L+E+NPLI+   G +  LD K+S D+NA +RH + +
Sbjct: 163 EAALDGAAELLTKLWEVFVQADATLVEVNPLILTGEGTVVALDGKVSLDENADFRHPENE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
            L D S  D  E +AK+  L+Y+ L G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDNSAVDPLEQKAKEKGLNYVKLTGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIP 354
           FLD+GGGA  + +A    II SD SVK + +NIFGGI  CD +  GI+ A++ V  I  P
Sbjct: 283 FLDIGGGASAEVMANGLSIILSDPSVKSVFVNIFGGITACDAVANGIIKALELVGDITTP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           LV+RL+G N + G R++AE+ L V+  +D  D 
Sbjct: 343 LVVRLDGNNAEEGRRILAEANLPVVKPVDTMDG 375


>gi|297571846|ref|YP_003697620.1| succinyl-CoA synthetase subunit beta [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296932193|gb|ADH93001.1| succinyl-CoA synthetase, beta subunit [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 390

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 129/395 (32%), Positives = 214/395 (54%), Gaps = 26/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           M+++EYQA+ L  K+ VPV  G+V ++   AE A + L     L VVK+Q+  GGRGK  
Sbjct: 1   MDLYEYQARELFAKHGVPVVNGIVATTPEEAEQAARQLLEATNLVVVKAQVKTGGRGKA- 59

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    GGV++  + +       +ILG  +        G  V+ V +  GADI  E 
Sbjct: 60  ---------GGVKLARTPEEAKERAGDILGMDI-------KGHTVHRVLIASGADITEEY 103

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+L+DR+      + S +GGM+IE++A + P+ + K+ ++P +G+T      +     
Sbjct: 104 YFSILLDRSERRYLAMCSKEGGMEIEQLAVERPEALAKVPVNPNVGITEAVAREILTEAG 163

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
              +       +   L+  +  +D +L+E+NPL+   +G +  +D K++ DDNA  RH +
Sbjct: 164 FAPEEHDAIVPVLCRLWDVYTQEDATLVEVNPLVKTADGSIIAVDGKVTLDDNARIRHPE 223

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGA----P 293
             +  D   E+  E  AK   L+Y+ LD G +G + NGAGL M+T+D++   G      P
Sbjct: 224 HAQFVDKQTENPLEARAKSLGLNYVKLDGGQVGIIGNGAGLVMSTLDVVAYAGEEYGVGP 283

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--I 351
           ANFLD+GGGA+ D ++    +I +D  V+ + +N+FGGI  CD + KGI++A+  +    
Sbjct: 284 ANFLDIGGGANADVMSHGLDVILNDPDVRSVFVNVFGGITACDEVAKGIVAALDILGDAA 343

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           + P+V+RL+G  V  G  ++AE+   ++T     D
Sbjct: 344 SKPIVVRLDGNKVAEGRAILAEAHHPLVTLEPTMD 378


>gi|315103905|gb|EFT75881.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL050PA2]
          Length = 391

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 213/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L + + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLSETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQSDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVAEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|296118631|ref|ZP_06837209.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968530|gb|EFG81777.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 397

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 137/406 (33%), Positives = 222/406 (54%), Gaps = 28/406 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K++VPV +G+V +S   AE A + L   + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHDVPVLRGIVATSPTQAEEAAEKLGTDVVVVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         +ILG  +           V  V + +GADI  E Y 
Sbjct: 58  -------GGVKLAKSPAEAAQAADDILGLKI-------KDHTVRRVMIAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT      + S +GG++IE +A + P+ + +    PL G+T+     +       
Sbjct: 104 SILLDRTKRRYLVMLSKEGGVEIETLAVERPEALVRRSFSPLDGMTTTLAREIATEAGFS 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  LY  + ++D +L+E+NPL+   +G +  LD K+S D+NA +RH +  
Sbjct: 164 EEDTDKLVPVFKKLYDTYEEEDATLVEVNPLVKTSSGDIVALDGKVSLDENAGFRHPEHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
           EL D   +D  E++A++  L+Y+ LDG++G + NGAGL M+T+D++   G        PA
Sbjct: 224 ELEDHYAQDPLELKAQKMGLNYVKLDGSVGVIGNGAGLVMSTLDVVAYAGEDLASQPKPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK----EVK 350
           NFLD+GGGA+ + +A   ++I  D  VK + +N+FGGI  CD + KGI+ A +    E  
Sbjct: 284 NFLDIGGGANAEVMANGLEVILGDPQVKSVFVNVFGGITACDEVAKGIVQAFRILESEEI 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
              PLV+RL+G N D+G  ++ ++ L  +     +D+AA+      
Sbjct: 344 EPKPLVVRLDGNNADLGCSILKDADLPKLRQVGTMDEAARVAAELA 389


>gi|194379366|dbj|BAG63649.1| unnamed protein product [Homo sapiens]
          Length = 329

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 144/313 (46%), Positives = 201/313 (64%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G  L TKQTG  G   N V V +     RE Y ++ ++R+      I S+ GG++IE+
Sbjct: 1   MIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA + P+ I K  ID   G+  E    L   +           +    LY  F   D ++
Sbjct: 61  VAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATM 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI L
Sbjct: 121 IEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD  V  IL
Sbjct: 181 DGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+SGL ++   DLD
Sbjct: 241 VNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLD 300

Query: 386 DAAQKIVHAVKGV 398
           +AA+ +V   + V
Sbjct: 301 EAARMVVKLSEIV 313


>gi|15806266|ref|NP_294971.1| succinyl-CoA synthetase subunit beta [Deinococcus radiodurans R1]
 gi|21264061|sp|Q9RUY3|SUCC_DEIRA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|6458989|gb|AAF10816.1|AE001972_6 succinyl-CoA synthetase, beta subunit [Deinococcus radiodurans R1]
          Length = 386

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 140/382 (36%), Positives = 207/382 (54%), Gaps = 22/382 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K +LR + V V  G V ++    ++  K    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKEVLRDFGVNVQDGKVATTPEEVQAIYKEYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--EL 118
                  GGV+  ++    + + + ILG  +        G  VN V V    DI    E 
Sbjct: 57  -------GGVKYSANEDKALENAKNILGMDI-------KGLTVNKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI +  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSYTLMASAEGGMEIEEVAATNPEKIIRHRVDPVTGLRPYEAREVAIKAG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G       D+   + KA  ++D  L+EINPL +  +G    LD+K   DDNA+YRH D
Sbjct: 163 FRGNL-NKIADMMVKMSKAALERDAVLVEINPLFVDADGTPIALDTKFEIDDNAMYRHKD 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +   R++S E   E+EA  +  +Y+ LD GN+G + NGAG+ M T+D++   G  PANFL
Sbjct: 222 LAHYRELSAEHPLEVEASDYGFAYVKLDDGNVGVLGNGAGIVMTTLDVVNRAGAKPANFL 281

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGA  D V  A K+++ D  VK I INIFGGI R D + KG++ A+ E  +  P+ M
Sbjct: 282 DIGGGAKADVVYNAVKLVSKDPDVKAIFINIFGGITRADEVAKGVIRALDEGILTKPVRM 341

Query: 358 RLEGANVDIGNRLIAESGLNVI 379
           R+ G   D    L+ E   ++I
Sbjct: 342 RIAGTAEDEAKALLNEKNSDLI 363


>gi|298345240|ref|YP_003717927.1| succinyl-CoA synthetase subunit beta [Mobiluncus curtisii ATCC
           43063]
 gi|298235301|gb|ADI66433.1| succinyl-CoA synthetase beta chain [Mobiluncus curtisii ATCC 43063]
          Length = 386

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 140/392 (35%), Positives = 221/392 (56%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  G V S+V  A++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGVPVLPGKVASTVEEAKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S++   ++ + ILG  +        G  V  V V  GADI RE Y 
Sbjct: 58  -------GGVKLARSVEEAAANAQAILGMNI-------KGHTVYRVMVVAGADIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+       + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALAKVPI-PASGMDVTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 PETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHSEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   ++T ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLVTMMETMD 374


>gi|227506176|ref|ZP_03936225.1| succinate--CoA ligase (ADP-forming) [Corynebacterium striatum ATCC
           6940]
 gi|227197200|gb|EEI77248.1| succinate--CoA ligase (ADP-forming) [Corynebacterium striatum ATCC
           6940]
          Length = 390

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 135/396 (34%), Positives = 211/396 (53%), Gaps = 27/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VP  +G+V +S   AE A   L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPTLRGIVATSAVQAEEAAAKLGTPIVVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG  +           V  V V +GADI  E Y 
Sbjct: 58  -------GGVKLAKSPAEAAEKAEEILGLKI-------KDHTVRKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DRT      + S +GG++IE++A + P+ + +    PL G+T      +       
Sbjct: 104 SILLDRTKRRYLAMLSKEGGVEIEKLAAERPEALIRRSFSPLDGMTDTLARDMAYEAGFV 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  LYK +  +D +L+E+NPL+    G +  LD K++ D NA +RH +  
Sbjct: 164 EEDVAKLVPVFKQLYKVYTAEDATLVEVNPLVKTAQGDIIALDGKVTLDGNAEFRHSEHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D    D  E++A+Q  L+Y+ LDG++G + NGAGL M+T+D++   G        PA
Sbjct: 224 ALHDHGATDPLELKAQQMGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEDLPNQPKPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK----EVK 350
           NFLD+GGGA+ + +    ++I  D  VK + +N+FGGI  CD + KGI+ A K    +  
Sbjct: 284 NFLDIGGGANAEVMTNGLEVILGDPQVKSVFVNVFGGITACDEVAKGIVQAYKILASDGI 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              PLV+RL+G N ++G  ++ ++ L  +  +   D
Sbjct: 344 EPKPLVVRLDGNNAELGRSILDDAHLPKLEQVSTMD 379


>gi|221090943|ref|XP_002165337.1| PREDICTED: similar to succinate-CoA ligase, ADP-forming, beta
           subunit [Hydra magnipapillata]
          Length = 409

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 163/395 (41%), Positives = 229/395 (57%), Gaps = 58/395 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY A  +LRK ++ V +G V  +   A +  K++    +V+K+Q+ AGGRGKG F 
Sbjct: 54  LSVHEYIAIDMLRKADIKVPRGDVARTQEEALNVAKSIGTHDFVIKAQVLAGGRGKGHFD 113

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S K V     ++LG  L T QTG  G   N V + +     RE Y+
Sbjct: 114 ---SGLKGGVKIAYSAKEVAEIADKMLGQKLYTLQTGSDGRPCNEVLIVERLYPRREYYV 170

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +DR +     IAS+QGGM IE+VA++                               
Sbjct: 171 AITLDRKAKGPLLIASSQGGMSIEDVAREN-----------------------------P 201

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+F                           +  +D K++FDDNAL+RH ++ 
Sbjct: 202 DAIIKHPIDIF--------------------------EVLCMDCKLTFDDNALFRHKELI 235

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+D +++D RE+EA ++NL+YI L+G+IGC+VNGAGLAMATMDIIKL GGAPANFLDVG
Sbjct: 236 ALKDWTQDDHREVEASRYNLNYIGLEGSIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 295

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V AAF+II+SD  VK IL+NIFGGIM+CDV+ +GI+ A K + + IPLV+RL+
Sbjct: 296 GGATAEAVTAAFRIISSDRRVKAILVNIFGGIMKCDVIAEGIIEAAKALHLKIPLVVRLQ 355

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G NVD    LIA SGL ++   DLDDAA+ +V   
Sbjct: 356 GTNVDDAKALIANSGLRILPCDDLDDAARMVVKLS 390


>gi|295838515|ref|ZP_06825448.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. SPB74]
 gi|295827036|gb|EFG65201.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. SPB74]
          Length = 391

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 141/397 (35%), Positives = 216/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPADAVEKAGQILGMDI-------KGHTVHKVMLAQTADIAEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGM+IEEVA   P+ + K+ +D   GVT E    + D     
Sbjct: 103 SFLLDRTNRTFLAMASVEGGMEIEEVAATKPEALAKIAVDANEGVTPEKAREIVDAANFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    +    L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  + +
Sbjct: 163 ADVKDGIAEALQKLWTVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENADFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEN 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++ PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 VSKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 379


>gi|25029006|ref|NP_739060.1| succinyl-CoA synthetase subunit beta [Corynebacterium efficiens
           YS-314]
 gi|23494293|dbj|BAC19260.1| putative succinyl-CoA synthetase beta subunit [Corynebacterium
           efficiens YS-314]
          Length = 425

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 137/395 (34%), Positives = 216/395 (54%), Gaps = 27/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   + VPV +G+V  +   A  A + L GP  VVK+Q+  GGRGK    
Sbjct: 27  MDLFEYQARDLFEAHGVPVVRGIVADTPEDARRAAEELGGPT-VVKAQVKVGGRGKA--- 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+    +        IL   +        G  V  V V +  DI  E Y 
Sbjct: 83  -------GGVRLAGDPQKAQEAAGAILSMDI-------KGHTVEQVMVVEAVDIAEEYYF 128

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +A++ P+ + ++ ++PL G+       +       
Sbjct: 129 SILLDRANRSYLAMCSMEGGMEIEVLARERPEALARVEVNPLTGIDDTKAREIARAAGFD 188

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LY+ + D+D +L+E+NPL++   G +  LD KI+ DDNA +RH + +
Sbjct: 189 DTIAQKIVPVLQQLYRVYHDEDATLVEVNPLVLTAEGEVLALDGKITLDDNADFRHDNRE 248

Query: 241 ELR-DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGG-APA 294
           EL       D  E+ AK++ L+Y+ LDG +G + NGAGL M+T+DI+      +GG APA
Sbjct: 249 ELVGSAGTTDPLELRAKKNGLNYVRLDGTVGIIGNGAGLVMSTLDIVAEAGQRHGGQAPA 308

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  D + A  ++I  D  V+ +L+N+FGGI  CD + +GI+ A++E+     
Sbjct: 309 NFLDIGGGASSDSMVAGLEVIMCDPQVRSVLVNVFGGITACDEVARGIVGALEELGDGAA 368

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDD 386
            P+V+RL+G NVD G  ++ E    ++T    +D+
Sbjct: 369 KPIVVRLDGHNVDKGREILEEFNHPLVTLVAGMDE 403


>gi|297559044|ref|YP_003678018.1| succinyl-CoA synthetase subunit beta [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843492|gb|ADH65512.1| succinyl-CoA synthetase, beta subunit [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 393

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 144/400 (36%), Positives = 216/400 (54%), Gaps = 31/400 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQAK L  +Y VPV +G V S+   A +          P  VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQAKQLFAEYGVPVPQGKVASTAAEARAIADEFAAAGKPRVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV+V    +   +   +ILG  +        G  V+ V VE+ +DI  E
Sbjct: 61  ----------GGVKVAEGPEDAQAKAEQILGMDI-------KGHTVHRVLVEEASDIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S L+DR +     I S +GGMDIEEVA+  P  + K  +D L G  +   A +    
Sbjct: 104 YYFSFLLDRANRTFLSICSAEGGMDIEEVAETNPDAVAKFPVDALTGAPASIAAEIVKAG 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +L   A     ++   L+ AF  KD +L+E+NPLI+ K+GR+  LD K++ D+NA +R  
Sbjct: 164 KLPEAATEGATEVITKLWDAFVGKDATLVEVNPLILTKDGRVVALDGKVTLDENAEFRQ- 222

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----A 292
           D++ L    E D  E+ AK   L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 223 DLESLTFAEEGDPLEVAAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVK 282

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-- 350
           PANFLD+GGGA  + +A    II  D SVK + +N+FGGI  CD +  GI+ A++ ++  
Sbjct: 283 PANFLDIGGGASAEVMANGLDIILGDPSVKSVFVNVFGGITACDAVANGIVQALELLESR 342

Query: 351 ---INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
              ++ PLV+RL+G N ++G  ++ +     +  +D  D 
Sbjct: 343 GDDVSKPLVVRLDGNNAELGREILTKRAHPAVRQVDTMDG 382


>gi|190347664|gb|EDK39982.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 327

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 199/324 (61%)

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + S+ +       ++LG  LITKQTG  G  V  VY+ +  D   E YL++L+DR + + 
Sbjct: 1   MISTPEEAKELSEKMLGHKLITKQTGEAGKEVTAVYIVERKDAKTEAYLAILMDRATQLP 60

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             +AS+QGGMDIE VA   P  I    I    GVT      +  +L    +A  +     
Sbjct: 61  MIVASSQGGMDIEGVAAKDPDAIKTFPIQLDEGVTDSKATEIASVLGFSQEAVPEAASTI 120

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LYK F ++D + +EINPL  + +G +  +D+K+ FDDNA +R  ++   RD ++ED  
Sbjct: 121 QKLYKVFMERDCTQVEINPLSEITDGSVMAMDAKLGFDDNASFRQKEVFSWRDPTQEDPE 180

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E+EA ++ L++I LDGNI  +VNGAGLAMATMDIIKL GG PANFLD GG A  + +  A
Sbjct: 181 EVEAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLNGGEPANFLDCGGTATPETIEKA 240

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           F++I SD  V GI +NIFGGI+RCD + KG+++A K  +++IP+V+RL+G N+     LI
Sbjct: 241 FELILSDKKVNGIFVNIFGGIVRCDYVAKGLIAATKNFQLDIPVVVRLQGTNMKEAKELI 300

Query: 372 AESGLNVITAIDLDDAAQKIVHAV 395
             SGL +    DLD AA+KIV   
Sbjct: 301 NNSGLKLYPFEDLDPAAEKIVSLA 324


>gi|307178344|gb|EFN67098.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Camponotus floridanus]
          Length = 384

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 157/358 (43%), Positives = 220/358 (61%), Gaps = 11/358 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           IHE+ A  LL++  +PV    V  +   A +  K L     V+K+QI AGGR  G FK+ 
Sbjct: 37  IHEHMAYTLLKEAGIPVPPFGVAKTPDEAANLAKNLNTKDLVLKAQILAGGRAMGHFKD- 95

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV +  + + V      ++G  LITKQTG  G   N V V       +E Y+++
Sbjct: 96  --KDLSGVVMCETPEQVKELTSNMIGKVLITKQTGAAGKICNSVMVTARMFPRKEHYMAV 153

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +++      AF  S   G++IEE+A   P+ +  + ID   G+TS    S+ + L L G 
Sbjct: 154 MLES-----AFDVS---GVNIEEIAAVNPEAVTYIPIDISKGLTSAQADSVGEKLGLAGN 205

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            +     +  NLY+ F +KD  L+EINP      G+   LD K  FDD+A +R  ++  L
Sbjct: 206 NKEIASIIACNLYELFVEKDALLVEINPFAEDICGQYYALDCKCKFDDSADFRQKELFTL 265

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGG 302
           +D ++ D +E+EA++HNL+YIALDGNIGCMVNGAGLAMATMDIIKLYGG PANFLDVGG 
Sbjct: 266 KDTTQMDPKEVEAEKHNLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGTPANFLDVGGT 325

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           A  + V   FKI++SD  V+ ILINIFGGIMRCD++ +GI+ A K++K++IP+V+RL+
Sbjct: 326 ATIETVTEGFKILSSDPKVEAILINIFGGIMRCDIIAQGIIDAFKQLKLHIPIVVRLQ 383


>gi|297192594|ref|ZP_06909992.1| succinyl-CoA synthetase subunit beta [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297151419|gb|EFH31148.1| succinyl-CoA synthetase subunit beta [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 393

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 143/398 (35%), Positives = 221/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  VN V + +   +I  E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVNKVMIAETAPEIAEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS +GGMDIEEVA   P+ + K+ +D   GVT E  A +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVEGGMDIEEVAATKPEALAKVPVDANEGVTKEKAAEIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+K F  +D  L+E+NPL  + +GR+  LD K+S D+NA +R  D 
Sbjct: 163 PAEVADQVADILVTLWKTFIAEDALLVEVNPLAKVADGRVIALDGKVSLDENADFRQPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHDNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|302519548|ref|ZP_07271890.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SPB78]
 gi|318058780|ref|ZP_07977503.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SA3_actG]
 gi|318078965|ref|ZP_07986297.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SA3_actF]
 gi|302428443|gb|EFL00259.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. SPB78]
          Length = 391

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 141/397 (35%), Positives = 217/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPADAVKKAGQILGMDI-------KGHTVHKVMLAQTADIAEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGM+IEEVA   P+ + K+ +D   GVT E    + D  +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGMEIEEVAATKPEALAKIAVDANEGVTPEKAREIVDAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    +    L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  + +
Sbjct: 163 EDVKDGIAEALQKLWTVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENADFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEN 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++ PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 VSKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 379


>gi|296140992|ref|YP_003648235.1| succinyl-CoA synthetase subunit beta [Tsukamurella paurometabola
           DSM 20162]
 gi|296029126|gb|ADG79896.1| succinyl-CoA synthetase, beta subunit [Tsukamurella paurometabola
           DSM 20162]
          Length = 387

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 126/403 (31%), Positives = 210/403 (52%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A +  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTTPGRVTDTAADARAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +     +    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAPTADDAQTHSENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GG++IE  A++ P  + K+ ID   GV       + +  +L 
Sbjct: 103 SFLLDRANRTHLAMCSVEGGVEIEVTAEENPDALAKVAIDATKGVDLALAREIAEKGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ +  +D +L+E+NPL+   + ++  LD K++ D+NA +RH +  
Sbjct: 163 AEVLDAAAVTIQKLWEVYVGEDATLVEVNPLVRTPDDQILALDGKVTLDENADFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFADAGSTDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--I 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+  +      
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALNTLGDTASK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G  ++A +   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNKVEEGRAILAAANHPLVTLAQTMDEGADKAAELA 385


>gi|333026621|ref|ZP_08454685.1| putative succinyl-CoA synthetase subunit beta [Streptomyces sp.
           Tu6071]
 gi|332746473|gb|EGJ76914.1| putative succinyl-CoA synthetase subunit beta [Streptomyces sp.
           Tu6071]
          Length = 391

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 141/397 (35%), Positives = 218/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     +    +ILG  +        G  V+ V +   ADI+ E Y+
Sbjct: 57  -------GGVKLASDPADAVEKAGQILGMDI-------KGHTVHKVMLAQTADIVEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GGM+IEEVA   P+ + K+ +D   GVT E    + D  +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGMEIEEVAATKPEALAKIAVDANEGVTPEKAREIVDAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +    +    L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  + +
Sbjct: 163 EDVKDGIAEALQKLWTVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENADFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGEN 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++ PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 VSKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 379


>gi|169236260|ref|YP_001689460.1| succinyl-CoA synthetase subunit beta [Halobacterium salinarum R1]
 gi|21264048|sp|Q9HPP1|SUCC_HALSA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226734957|sp|B0R5U5|SUCC_HALS3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|167727326|emb|CAP14112.1| succinate--CoA ligase (ADP-forming) beta subunit [Halobacterium
           salinarum R1]
          Length = 382

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 130/396 (32%), Positives = 208/396 (52%), Gaps = 21/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P  +  + +SV  A      L  P+ V K+Q+H GGRGK    
Sbjct: 1   MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYPVAV-KAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +          ILG  L        G  V+ V VE+  D   ELY+
Sbjct: 57  -------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR+ G    + S +GG+DIE VA++ P+ I +  +DP  G+ +    +      ++
Sbjct: 103 GVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   +Y  + D D + +EINP+++     +   D+ +  D++AL+R     
Sbjct: 163 QDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQPAFA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++ + + ED  E +A ++   Y+ LDGN G + NGAGL M T+D++  YGG PANFLD+G
Sbjct: 223 DMEEDAAEDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTTLDLVDYYGGQPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           GGA  D+VA A  ++ SD +V  ++ NIFGGI R D + KGI SA+++  +I  P+V+RL
Sbjct: 283 GGAKADRVANALDMVFSDENVDSVVFNIFGGITRGDEVAKGINSALEQFDEIPTPVVVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N   G  ++ +  + V     L+ A Q+ V   
Sbjct: 343 AGTNAAEGREILNDDLVTVE--ETLEGAVQRAVEYA 376


>gi|294631006|ref|ZP_06709566.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. e14]
 gi|292834339|gb|EFF92688.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. e14]
          Length = 393

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 144/407 (35%), Positives = 223/407 (54%), Gaps = 30/407 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAAREITERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + +   +I+ E Y
Sbjct: 57  -------GGVKLAATPDEAVARSTDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGM+IEEVA   P+ + K+ ID + GVT E    +    + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMEIEEVAATRPEAVAKMPIDAIDGVTLEKAREIVAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+  F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH D 
Sbjct: 163 PAEVADKVADVLVKLWDTFIKEDALLVEVNPLAKVASGEVIALDGKVSLDDNAEFRHPDF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELHDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV----- 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           K+  PLV+RL+G N ++G +++ ++   ++     +D AA K     
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILTDANHPLVQRVDTMDGAADKAAELA 389


>gi|257054562|ref|YP_003132394.1| succinyl-CoA synthetase subunit beta [Saccharomonospora viridis DSM
           43017]
 gi|256584434|gb|ACU95567.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Saccharomonospora viridis DSM 43017]
          Length = 389

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 139/393 (35%), Positives = 213/393 (54%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G V+S    A  A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKELFAAHGVPVLPGTVVSEAEEARRAAEEIGGQV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +         R ILG  +        G     V V + ++I  E Y 
Sbjct: 57  -------GGVKLAADPDEAAEKARAILGLDI-------KGHVTRRVLVTEASEIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     +AS +GGM+IE++A + P+ + K+ IDPL GV  +    +       
Sbjct: 103 SFLLDRANRTFLAMASAEGGMEIEQLAAERPEALAKVPIDPLTGVDLDKAREIVTKANFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R    ++   L++ F  +D +L+E+NPL+      +  LD K++ DDNA +R     
Sbjct: 163 EVVREKAAEVIVKLWETFVSEDATLVEVNPLVRDPKDEIIALDGKVTLDDNAAFRQPKHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-----PAN 295
           +L DV  ED  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 DLVDVEAEDPLEAKAKAKGLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA  ++I  D  VK + +N+FGGI  CD +  GI+ A+K +      
Sbjct: 283 FLDIGGGASAEVMAAGLEVILGDPDVKSVFVNVFGGITACDAVANGIVEALKILGDNATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G R++ E+   ++T +D  D
Sbjct: 343 PLVVRLDGNNVEEGRRILTEAAHPLVTLVDTMD 375


>gi|325283198|ref|YP_004255739.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           proteolyticus MRP]
 gi|324315007|gb|ADY26122.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Deinococcus
           proteolyticus MRP]
          Length = 386

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 140/382 (36%), Positives = 209/382 (54%), Gaps = 22/382 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQ K +LR + V V +G V  +    ++  +    P+ VVK+Q+H GGRGK    
Sbjct: 1   MKLHEYQGKEILRDFGVNVQEGKVAHTPEEVKAIAEEYGQPV-VVKAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--EL 118
                  GGV+   + +  + + + ILG  +        G  V  V V    DI    E 
Sbjct: 57  -------GGVKFSPTAEKALENGQNILGMDI-------KGLTVEKVLVTKAVDIDAGTEY 102

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ ++VDR       +AS +GGM+IEEVA   P+KI K  +DP+ G+   +   +     
Sbjct: 103 YVGMIVDRNVQSYTLMASAEGGMEIEEVAAATPEKIIKHRVDPVTGLRPYEAREVAIKAG 162

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G       D+   + KA  ++D  L+EINPL + ++G    LD+K   DDNA+YRH D
Sbjct: 163 FKGNL-NKIADMMVKMSKAALERDAVLVEINPLFVDESGTPLALDTKFEIDDNAMYRHQD 221

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +   R++S E   E+EA ++  +Y+ LD GN+G + NGAG+ M T+D++   G  PANFL
Sbjct: 222 VAHYRELSAEHPLEVEASEYGFAYVKLDDGNVGVLGNGAGIVMTTLDVVNRAGAKPANFL 281

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGGA  D V  A K+++ D  VK I INIFGGI R D + KG++ A+ E  +  P+ M
Sbjct: 282 DIGGGAKADVVYNAVKLVSKDPDVKAIFINIFGGITRADEVAKGVIQALDEGILTKPVRM 341

Query: 358 RLEGANVDIGNRLIAESGLNVI 379
           R+ G   D    L+AE   ++I
Sbjct: 342 RIAGTAEDEAKALLAEKNSDLI 363


>gi|149412748|ref|XP_001510520.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 371

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 137/352 (38%), Positives = 205/352 (58%), Gaps = 3/352 (0%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K+QI AGGRGKG F    +  +GGV +    K V    ++++G  L TKQT   G +V
Sbjct: 20  VLKAQILAGGRGKGTFD---SGLQGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKDGVKV 76

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
           N V + +  DI RE Y ++L+DR       + S +GG+DIE+VA   P+ IFK  +D   
Sbjct: 77  NKVMIAEALDISRETYFAILMDRACNGPVLVGSPKGGVDIEDVAATTPELIFKEEVDIYE 136

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+       + + L  +   +    D    LY  F + D + +E+NP      G++   D
Sbjct: 137 GLKDSQALRMAENLGFKDALKNQAADQIKKLYTLFLEIDATQVEVNPFGETPEGQVVCFD 196

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +KI+FDDNA +R  +I  + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT 
Sbjct: 197 AKINFDDNAEFRQKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATC 256

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DII L GG PANFLD+GGG  + +V  AFK++T+D  V  +++ + G I  C VL + + 
Sbjct: 257 DIISLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVTHLIVQLIGVIYNCIVLSQAVT 316

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
                +   + + + + G NV   +R++ +SGL + +A DL+DAA+K+V +V
Sbjct: 317 KGCLTLSKKLVIFISISGTNVHEAHRILNDSGLPITSANDLEDAAKKVVASV 368


>gi|84998768|ref|XP_954105.1| succinyl-coA ligase, subunit [Theileria annulata]
 gi|65305103|emb|CAI73428.1| succinyl-coA ligase, subunit, putative [Theileria annulata]
          Length = 433

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 140/399 (35%), Positives = 215/399 (53%), Gaps = 8/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           +N+ EY    +L++  V V +    ++   A  A K++      P  V+K+ +  GGRGK
Sbjct: 36  LNVSEYIGMTVLKRNGVRVPEFRSATTPEEAFEASKSIQQVTGKPELVIKALVLTGGRGK 95

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F         GV V +S +S     + +LG+ L TKQT   G   + V +     +  
Sbjct: 96  GVFSNTGFK---GVEVVNSPESASECAKGMLGNYLTTKQTVGKGLLCSQVLLAQKLSLKN 152

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS  +DR SG +  IA+  GG ++EE+A +YP  +  L + PL G+T E+   L   
Sbjct: 153 ERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHEYPDSVLTLSVSPLTGLTDENTEQLVKQ 212

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L      R         +Y  F   D +LLE+NPL+   +G +   DSK+  DDNA YR 
Sbjct: 213 LSFTENVRDQVVAAVKQIYNTFVQFDGTLLEVNPLVETDSGEILACDSKLIVDDNAKYRQ 272

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            ++ ++  V+     E EA +  L+YI+LDGN+ C+VNGAGLAMATMD+I+ +GG  ANF
Sbjct: 273 KELFDMTPVTRT-REEEEADRAGLNYISLDGNVACIVNGAGLAMATMDLIQHHGGRAANF 331

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG +  + ++ A +I+ SD+  K +L+NI GGI+RCD   +  + A K +   +P+V
Sbjct: 332 LDVGGNSTSETLSKALEIVNSDTRAKVLLVNIVGGIVRCDKFAESFVEASKTLSRQLPVV 391

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G   +   +L+ ES +  +   D D   +  V   
Sbjct: 392 IRLQGTRAEAAKKLLNESNIPHLFCTDFDSVCKSAVEIA 430


>gi|314924240|gb|EFS88071.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL001PA1]
          Length = 391

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 213/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L + + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLSETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQSDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDLLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|239979921|ref|ZP_04702445.1| succinyl-CoA synthetase subunit beta [Streptomyces albus J1074]
 gi|291451776|ref|ZP_06591166.1| succinyl-CoA synthetase subunit beta [Streptomyces albus J1074]
 gi|291354725|gb|EFE81627.1| succinyl-CoA synthetase subunit beta [Streptomyces albus J1074]
          Length = 392

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 139/398 (34%), Positives = 221/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + +   +I+ E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ +D   GVT E    +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVDSNTGVTIEKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL  + +G +  LD K+S D+NA +R  D 
Sbjct: 163 PAEVAEKVAEVMVTLWDTFVAEDALLVEVNPLAKVASGEVLALDGKVSLDENADFRQPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKTKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|296130374|ref|YP_003637624.1| succinyl-CoA synthetase, beta subunit [Cellulomonas flavigena DSM
           20109]
 gi|296022189|gb|ADG75425.1| succinyl-CoA synthetase, beta subunit [Cellulomonas flavigena DSM
           20109]
          Length = 393

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 137/397 (34%), Positives = 219/397 (55%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G+V ++   A +A + L    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDIFEKHGVPVLGGIVATTPEEARAAAEQLLPAEGGVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S         EILG  +        G  V+ V +  GA I +E
Sbjct: 61  ----------GGVKIARSADEAAERAGEILGMDI-------KGHTVHRVMIAAGARIAQE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y SLL+DR       + S +GGM+IE++A + P+ + K+ +DP  G+       +    
Sbjct: 104 FYFSLLLDRAERRYLAMCSVEGGMEIEQLAVERPEALAKVAVDPRTGIDQAKADEIVAAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
               +   +   +   L+  + D+D +L+E+NPL++ + G +  LD K++ D NA +RH 
Sbjct: 164 GFAPEIAGEVAAVLQKLWLVYRDEDATLVEVNPLVLTEEGDVVALDGKVTLDANADFRHE 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----A 292
           D   L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 224 DHAALEDKAAADPLEARAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA  + +AA   II ++  VK + +N+FGGI  CD +  GI++A++ +  +
Sbjct: 284 PANFLDIGGGASAEVMAAGLDIILTNPQVKSVFVNVFGGITACDAVANGIVAALEILGDE 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            + PLV+RL+G NV  G R++A +G  ++T  D  D 
Sbjct: 344 ASKPLVVRLDGNNVVEGRRILAAAGHPLVTLADTMDG 380


>gi|76573373|gb|ABA46791.1| succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 311

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 156/310 (50%), Positives = 217/310 (70%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  L+TKQTG  G  V+ VY+ +   ++ E+Y S+++DR +     IA  +GG  IE+
Sbjct: 1   MLGQMLVTKQTGAQGKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +A+ +P  I K+ ID   G++ ED A + D L  +   R D  +    LY  FC+ D ++
Sbjct: 61  LAEKFPDMIIKVPIDVFKGISDEDAAKVVDGLAPKVADRNDSIEQVKKLYNLFCETDCTM 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LEINPL    + +L   D+K++FDDNA YR  +I  LRD S+ED RE+ A + +L+YI L
Sbjct: 121 LEINPLAETSDNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGG A + +V  AFKI+T+D  VK IL
Sbjct: 181 DGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNATEGQVVEAFKILTADEKVKAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGIM+CDV+  GI++A K+V++ +P+++RLEG NV+ G R++ ESG+ +ITA DLD
Sbjct: 241 VNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGMKLITAEDLD 300

Query: 386 DAAQKIVHAV 395
           DAA+K V A+
Sbjct: 301 DAAEKAVKAL 310


>gi|325969473|ref|YP_004245665.1| succinyl-CoA synthetase subunit beta [Vulcanisaeta moutnovskia
           768-28]
 gi|323708676|gb|ADY02163.1| succinyl-CoA synthetase, beta subunit [Vulcanisaeta moutnovskia
           768-28]
          Length = 374

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 147/393 (37%), Positives = 225/393 (57%), Gaps = 22/393 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+ K LL KY V + +G ++ S+      +K L  PL+  KSQ+   GR K    
Sbjct: 1   MRLLEYKGKELLNKYGVKIPRGAIVKSLDDV-QVLKALKFPLFA-KSQVPFAGRAKMGL- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                    VR   ++K   +  R+ LG  +           +  V  E+G ++ +ELY+
Sbjct: 58  ---------VRRVDTIKDAENAARDYLGKVI-------QDYPIRKVLFEEGVNVAKELYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     +AST+GG+DIEEVA+  P+KI +L ID   G+    +  +   L L+
Sbjct: 102 SITLDRENRGYLMLASTEGGIDIEEVARRSPEKIIRLYIDDYEGLRDYMIRGVAQKLGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   +   +Y+ F + D  L+EINPL +  +G+L  LD K+  DDN+L+RH DI 
Sbjct: 162 GSAAQDFATVAKAMYRVFTEYDAELVEINPLALTTDGQLVALDVKVMIDDNSLFRHPDIS 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              + S+    E+EA+++ L Y+ L G +G M NGAGL MATMD++K +G  PA+FLDVG
Sbjct: 222 --VEDSDYTMEELEARRYGLHYVELTGYVGIMANGAGLTMATMDLVKEFGHEPADFLDVG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V    K++  D  +K +L+NIFGGI RCD + +G++ A+ EVK N P+ +RL+
Sbjct: 280 GGASKDSVREGLKMLLMDDRIKAVLVNIFGGITRCDEVARGVVEALNEVKTNKPIFIRLK 339

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIV 392
           G N + G R++ E GL    TA +  +A  + +
Sbjct: 340 GTNEEEGRRILTEVGLKTYETAEEAMEALSRAI 372


>gi|300980468|ref|ZP_07175015.1| putative succinyl-CoA ligase [ADP-forming] subunit beta
           [Escherichia coli MS 200-1]
 gi|300307770|gb|EFJ62290.1| putative succinyl-CoA ligase [ADP-forming] subunit beta
           [Escherichia coli MS 200-1]
          Length = 312

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 157/311 (50%), Positives = 218/311 (70%), Gaps = 1/311 (0%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
           +LGS L+T QTGP G  V+ + + +    + +ELY  ++VDR S  V FI S +GG++IE
Sbjct: 1   MLGSQLVTYQTGPEGQYVSSILLCENIYPVRQELYFGMVVDRESQRVTFIVSPEGGVEIE 60

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +VA + P+KI  + IDPL GV    +  +  +L+L+         L    +KAF + D +
Sbjct: 61  KVAHETPEKISSVSIDPLTGVQPCHIREMFAVLQLEHGLFAAFSRLVNQAWKAFNELDFA 120

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           LLEINPL++ + G     D+K+S DDNALYRH ++Q LRD ++ED RE +A + +L+Y++
Sbjct: 121 LLEINPLVLRETGEFMCADAKVSLDDNALYRHPELQVLRDETQEDPRESQAAKLDLNYVS 180

Query: 265 LDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
           LDGNIGCMVNGAGLAMATMDIIKLYG  PANFLDVGGGA Q++V+ AF++I SDS VK I
Sbjct: 181 LDGNIGCMVNGAGLAMATMDIIKLYGEQPANFLDVGGGATQERVSEAFRLIVSDSKVKAI 240

Query: 325 LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
           L+NIFGGI+RCD++ + I+ A+ E +I +P+V+RL G N   G RL+AESGL V     L
Sbjct: 241 LVNIFGGIVRCDMIARAIIYALNEARITLPVVVRLSGNNAAEGQRLLAESGLTVEAVDSL 300

Query: 385 DDAAQKIVHAV 395
           DDAA++I+  +
Sbjct: 301 DDAAKRIIALL 311


>gi|159039722|ref|YP_001538975.1| succinyl-CoA synthetase subunit beta [Salinispora arenicola
           CNS-205]
 gi|189081793|sp|A8M469|SUCC_SALAI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|157918557|gb|ABV99984.1| succinyl-CoA synthetase, beta subunit [Salinispora arenicola
           CNS-205]
          Length = 392

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 138/397 (34%), Positives = 215/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++       ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGADETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P+K+ K  ID   GV +     +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKAPIDANTGVDAAMARQIITRAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  +L+KAF  +D +L+E+NPL     G L +LD+K+S D+NA +RH D +
Sbjct: 163 AEVVDQAVEVAVDLWKAFVAEDATLVEVNPLARTGQGGLLLLDAKVSLDENAAFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQAAVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A   +I+ SD SVK + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  PLV+RL+G N + G  ++  +   +I  +D  D 
Sbjct: 343 VTRPLVVRLDGNNAEAGRAILDGANNPLIQRVDTMDG 379


>gi|146414762|ref|XP_001483351.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 327

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 199/324 (61%)

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + S+ +       ++LG  LITKQTG  G  V  VY+ +  D   E YL++L+DR + + 
Sbjct: 1   MISTPEEAKELSEKMLGHKLITKQTGEAGKEVTAVYIVERKDAKTEAYLAILMDRATQLP 60

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             +AS+QGGMDIE VA   P  I    I    GVT      +  +L    +A  +     
Sbjct: 61  MIVASSQGGMDIEGVAAKDPDAIKTFPIQLDEGVTDSKATEIASVLGFSQEAVPEAALTI 120

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LYK F ++D + +EINPL  + +G +  +D+K+ FDDNA +R  ++   RD ++ED  
Sbjct: 121 QKLYKVFMERDCTQVEINPLSEITDGSVMAMDAKLGFDDNASFRQKEVFSWRDPTQEDPE 180

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E+EA ++ L++I LDGNI  +VNGAGLAMATMDIIKL GG PANFLD GG A  + +  A
Sbjct: 181 EVEAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLNGGEPANFLDCGGTATPETIEKA 240

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           F++I SD  V GI +NIFGGI+RCD + KG+++A K  +++IP+V+RL+G N+     LI
Sbjct: 241 FELILSDKKVNGIFVNIFGGIVRCDYVAKGLIAATKNFQLDIPVVVRLQGTNMKEAKELI 300

Query: 372 AESGLNVITAIDLDDAAQKIVHAV 395
             SGL +    DLD AA+KIV   
Sbjct: 301 NNSGLKLYPFEDLDPAAEKIVSLA 324


>gi|330470054|ref|YP_004407797.1| succinyl-CoA synthetase subunit beta [Verrucosispora maris
           AB-18-032]
 gi|328813025|gb|AEB47197.1| succinyl-CoA synthetase subunit beta [Verrucosispora maris
           AB-18-032]
          Length = 392

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 139/397 (35%), Positives = 218/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +  ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA D P+K+ K  ID + GV       + +     
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAADTPEKVVKAPIDAVKGVDEAKAREIVEAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +    L++AF  +D +L+E+NPL   K+G+L +LD+K+S D+NA +RH D +
Sbjct: 163 AEVADQVVETAVGLWQAFVAEDATLVEVNPLAKTKDGKLLLLDAKVSLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQATVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA    +A   +I+ SD SVK + +N+FGGI  CD +  GI+ A+  +K     
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVQALDLLKQRGEE 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  PLV+RL+G N + G  ++  +   +I  +D  D 
Sbjct: 343 VTKPLVVRLDGNNAEAGRAILDGANNPLIERVDTMDG 379


>gi|262201313|ref|YP_003272521.1| succinyl-CoA synthetase subunit beta [Gordonia bronchialis DSM
           43247]
 gi|262084660|gb|ACY20628.1| succinyl-CoA synthetase, beta subunit [Gordonia bronchialis DSM
           43247]
          Length = 387

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 134/403 (33%), Positives = 218/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V      A +  + +  P+ ++K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHGVPTTPGRVTDDAADARAIAEEIGKPV-MIKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++     S    ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYAATPDDAQSHAENILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEATARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD K++ D+NA +RH D  
Sbjct: 163 AEVLDAAAVTIAKLWEVFVAEDATLVEVNPLVRTPDDQILALDGKVTLDENADFRHPDHD 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFADKDATDPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+ ++  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALNKLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G  V+ G +++A++   ++T A  +D  A K     
Sbjct: 343 PLVVRLDGNKVEEGRKILADANHPLVTLAETMDSGADKAAELA 385


>gi|226365051|ref|YP_002782834.1| succinyl-CoA synthetase subunit beta [Rhodococcus opacus B4]
 gi|254778448|sp|C1AWW6|SUCC_RHOOB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|226243541|dbj|BAH53889.1| succinyl-CoA synthetase beta chain [Rhodococcus opacus B4]
          Length = 389

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 134/403 (33%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHEVPTSAGRVTDTVAGAREIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  + + +  ++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSADVDAAQANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D  L+E+NPL+   N  +  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFIKEDALLVEVNPLVRTPNDEILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEAAHPLVTVVGTMDEAADKAAELA 385


>gi|289679950|ref|ZP_06500840.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae FF5]
          Length = 290

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 139/300 (46%), Positives = 189/300 (63%), Gaps = 10/300 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVG
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVG 290


>gi|302869843|ref|YP_003838480.1| succinyl-CoA synthetase subunit beta [Micromonospora aurantiaca
           ATCC 27029]
 gi|315501305|ref|YP_004080192.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. L5]
 gi|302572702|gb|ADL48904.1| succinyl-CoA synthetase, beta subunit [Micromonospora aurantiaca
           ATCC 27029]
 gi|315407924|gb|ADU06041.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. L5]
          Length = 392

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 136/397 (34%), Positives = 216/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +  ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P+++ K  ID   GV       +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPERVVKAPIDANTGVDEAKAREIVTAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L++AF  +D +L+E+NPL   K+G+L +LD+K++ D+NA +RH D +
Sbjct: 163 AEIADQVVEVAVKLWQAFVAEDATLVEVNPLATTKDGKLLLLDAKVTLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK  +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQASVDPLEQAAKAKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +I+ SD SVK + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAEVMANGLEIVLSDPSVKSVFVNVFGGITACDAVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
              PLV+RL+G N + G  ++  +   +I  +D  D 
Sbjct: 343 ATKPLVVRLDGNNAEAGRAILDGAANPLIQRVDTMDG 379


>gi|290958040|ref|YP_003489222.1| succinyl-CoA synthetase subunit beta [Streptomyces scabiei 87.22]
 gi|260647566|emb|CBG70671.1| succinyl-CoA synthetase beta chain [Streptomyces scabiei 87.22]
          Length = 392

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 142/398 (35%), Positives = 223/398 (56%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + +   +I+ E Y
Sbjct: 57  -------GGVKLAATADEAVEHATNILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     IAS +GGM+IEEVA   P+ + K  ID   GVT E    + +    
Sbjct: 103 VSYLLDRTNRTFLSIASVEGGMEIEEVAATRPEAVAKTPIDANEGVTPEKAREIVEAANF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F ++D  L+E+NPL  + +G +  LD K+S D+NA +RH D 
Sbjct: 163 PAEVADKVVNVLVTLWKTFIEEDALLVEVNPLAKVASGDVIALDGKVSLDENADFRHPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELVDHAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLKDKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|314964914|gb|EFT09013.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL082PA2]
 gi|315093786|gb|EFT65762.1| succinate-CoA ligase, beta subunit [Propionibacterium acnes
           HL060PA1]
 gi|327325605|gb|EGE67404.1| succinyl-CoA synthetase, beta subunit [Propionibacterium acnes
           HL103PA1]
          Length = 391

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 138/404 (34%), Positives = 213/404 (52%), Gaps = 26/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV +G+V  +   A  A   L  P+  VK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V +GADI  E Y 
Sbjct: 58  -------GGVKIAKSPAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       + S +GGMDIE +AK+ P+ + K+ +DP+ GV       +       
Sbjct: 104 SILLDRGERRYLAMCSRKGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFP 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +         L + + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D  
Sbjct: 164 DSEQDAIVPAVLKLSETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQSDHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APA 294
            L D +  D  E+ A +  L+Y+ LDGN+G + NGAGL M+T+D +   G       APA
Sbjct: 224 GLVDRATTDLLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGEDFPGSPAPA 283

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-- 352
           NFLD+GGGA  + +A    +I SD  V+ + +N+FGGI  CD +  GI  A++++     
Sbjct: 284 NFLDIGGGASAEIMANGLDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAV 343

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G  V  G +++ E    ++T    +D+AA K     
Sbjct: 344 KPLVVRLDGNAVTEGRKILEEFNHPLVTMVSTMDEAASKAAELA 387


>gi|257485471|ref|ZP_05639512.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 288

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 137/298 (45%), Positives = 187/298 (62%), Gaps = 10/298 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQ K L  +Y +PV+KG  + +  AA  A   + G  +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   +  ++ LG  L+T QT   G  V  + VE   DI +ELYL
Sbjct: 58  -------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  + F+AST+GG+DIE++A D P+KI K  IDPL+G        L   L L+
Sbjct: 111 GAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRDLAFQLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +F  L K F D D++LLE+NPL+I  +G L  LD+KI+ D NA+YR   ++
Sbjct: 171 GKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLK 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
              D S++D RE  A +  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLD
Sbjct: 231 GFHDPSQDDPREAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLD 288


>gi|328884532|emb|CCA57771.1| Succinyl-CoA ligase [Streptomyces venezuelae ATCC 10712]
          Length = 424

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 139/397 (35%), Positives = 220/397 (55%), Gaps = 29/397 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L  K+ VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK     
Sbjct: 34  DLFEYQARDLFAKHGVPVLAGEVIDTPEAARAATERLGG-KSVVKAQVKVGGRGKA---- 88

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELYL 120
                 GGV++ +     ++   +ILG  +        G  V+ V + +   +I  E Y+
Sbjct: 89  ------GGVKLAADADEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYYV 135

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++   GVT E    +    +  
Sbjct: 136 SYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNANDGVTLEKAREIVAQAKFP 195

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   L+K F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R  + +
Sbjct: 196 ADVAEGVAEVLVTLWKTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPEHE 255

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 256 ALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 315

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  +
Sbjct: 316 FLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLASKGEE 375

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 376 VTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 412


>gi|284992795|ref|YP_003411349.1| succinyl-CoA synthetase subunit beta [Geodermatophilus obscurus DSM
           43160]
 gi|284066040|gb|ADB76978.1| succinyl-CoA synthetase, beta subunit [Geodermatophilus obscurus
           DSM 43160]
          Length = 387

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 133/394 (33%), Positives = 220/394 (55%), Gaps = 25/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ LL  + VPV  G V  +   AE+  + +   + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLLASHGVPVLPGGVAETPEQAEAIAREIGTTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +   +  ++ILG  +        G   + V V   +DI  E Y 
Sbjct: 57  -------GGVKLADDAEDARARAQDILGLDI-------KGHITHRVMVAQASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     +AS +GGM+IE++A + P+ + ++ +D   GV +     + D     
Sbjct: 103 SYLLDRSNRTFLAMASVEGGMEIEQLAVERPEALARIPVDATTGVDTAKATEIVDAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   L++ F  +D +L+E+NPL    +G +  LD+K++ D+NA +RH + +
Sbjct: 163 AEVRDQVIAIAVQLWEVFAQEDATLVEVNPLAKAPDGTVLALDAKVTLDENARFRHQEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ L+G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 TLEDTAAADPLEAAAKEKDLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGEEFGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    II SD +VK + +N+FGGI  CD +  GI+ A++ +  +   
Sbjct: 283 FLDIGGGASAEVMANGLHIILSDPAVKSVFVNVFGGITACDAVANGIVHALQILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           PLV+RL+G NV+ G R++AE+   ++T +D  D 
Sbjct: 343 PLVVRLDGNNVEEGRRILAEANHPLVTLVDTMDG 376


>gi|156087126|ref|XP_001610970.1| succinly CoA-ligase beta subunit [Babesia bovis T2Bo]
 gi|154798223|gb|EDO07402.1| succinly CoA-ligase beta subunit, putative [Babesia bovis]
          Length = 436

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 141/399 (35%), Positives = 224/399 (56%), Gaps = 8/399 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAE----SAIKTLPGPLYVVKSQIHAGGRGK 56
           +N+ E+    +L+++ +P     +  S   AE      +++      V+K+ +  GGRGK
Sbjct: 39  LNVPEFGGMRILKEHGIPTPMNRLARSPSEAEAMTHEILESTKCGEVVLKALVLTGGRGK 98

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G+F         GV +  S +   +    ++G+ L+TKQTG +G +   V V +  ++ +
Sbjct: 99  GKFV---GTDISGVELAKSPERAKTLAEGMIGNVLVTKQTGASGLKCKEVLVAEKLNLAK 155

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+S ++DR+S  +  IA+  GG ++EEV++  P  +  + I+PL G+T ++V  +   
Sbjct: 156 ERYISFMLDRSSCSIMAIATKHGGGNVEEVSEKDPSAVLTVKINPLKGITDDEVTKIATH 215

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           L+       D      N+Y AF  KD  LLEINPL   +N +L   DSK+  DDNA +R 
Sbjct: 216 LDFSKGLLEDTKSFVKNMYHAFVAKDALLLEINPLSETENSKLVACDSKVIIDDNADFRQ 275

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            +I E    + E+  E  A +  L+YI+L GNI C+VNGAGLAMAT+D++  +GG+P+NF
Sbjct: 276 KEIFESVPPA-ENELEARANEVGLNYISLGGNIACIVNGAGLAMATLDLLTHHGGSPSNF 334

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGG A    +  A  I+ SD+  K +L+NI GGI++CD      + A K  K+ IP+V
Sbjct: 335 LDVGGNATGHMLNQALDIVASDAKAKALLVNIVGGIVQCDQFALSFVEAAKNSKMQIPVV 394

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RL+G N D   R++ E+ +  I   D D AA+ +V   
Sbjct: 395 LRLQGTNADAAKRILNEAQIPHIFCQDFDSAAKSVVEIA 433


>gi|294814560|ref|ZP_06773203.1| succinyl-CoA synthetase subunit beta [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442950|ref|ZP_08217684.1| succinyl-CoA synthetase subunit beta [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327159|gb|EFG08802.1| succinyl-CoA synthetase subunit beta [Streptomyces clavuligerus
           ATCC 27064]
          Length = 391

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 141/398 (35%), Positives = 218/398 (54%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREVTERLGG-RSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ SS +  +    +ILG  +        G  V+ V + +   +I  E Y
Sbjct: 57  -------GGVKLASSPEDAVEKAGQILGMDI-------KGHTVHKVMLAETAPEIAEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS +GGMDIEEVA   P+ + K+ +D   GVT E  A +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVEGGMDIEEVAATKPEALAKIPVDANEGVTPEKAAEIVAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F  +D  L+E+NPL  + +GR+  LD K+S D NA +R    
Sbjct: 163 PAEVADQVAEILVTLWKTFVAEDALLVEVNPLAKVADGRVIALDGKVSLDANADFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKSKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|21223186|ref|NP_628965.1| succinyl-CoA synthetase subunit beta [Streptomyces coelicolor
           A3(2)]
 gi|256785715|ref|ZP_05524146.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
 gi|289769607|ref|ZP_06528985.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
 gi|21264055|sp|Q9KY56|SUCC1_STRCO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-1;
           AltName: Full=Succinyl-CoA synthetase subunit beta-1;
           Short=SCS-beta-1
 gi|8218209|emb|CAB92671.1| succinyl-CoA synthetase beta chain [Streptomyces coelicolor A3(2)]
 gi|289699806|gb|EFD67235.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
          Length = 394

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 142/402 (35%), Positives = 222/402 (55%), Gaps = 30/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAAREITERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ +S    ++   +ILG  +        G  V+ V + +   +I+ E Y
Sbjct: 57  -------GGVKLAASADEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GG++IEEVA   P+ + K  ID + GVT E    + +  + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGVEIEEVAATRPEAVAKTPIDAIDGVTPEKAREIVEAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+  F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH D 
Sbjct: 163 PAEVADKVADILVKLWDTFIKEDALLVEVNPLAKVVSGDVIALDGKVSLDDNAEFRHPDF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALHDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV----- 349
           NFLD+GGGA    +A   +II  D  V+ + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVRSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQK 390
           K+  PLV+RL+G N ++G +++ ++   ++     +D AA K
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILTDANHPLVQRVDTMDGAADK 384


>gi|117927589|ref|YP_872140.1| succinyl-CoA synthetase subunit beta [Acidothermus cellulolyticus
           11B]
 gi|189046869|sp|A0LRU4|SUCC_ACIC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|117648052|gb|ABK52154.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidothermus
           cellulolyticus 11B]
          Length = 392

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 142/406 (34%), Positives = 220/406 (54%), Gaps = 29/406 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L   + VP+  G V  +   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAAHGVPITPGEVAENPDQAADIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     +  +    ILG  +        G RV+ V V    DI  E Y+
Sbjct: 57  -------GGVKLADDADAAAAAAEAILGMEI-------RGHRVHRVLVTTAVDIAHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + LVDR+      + S +GG++IE+VA + PQ I ++ ID   GV +   A + D +   
Sbjct: 103 AFLVDRSRRSFLAMGSAEGGVEIEQVAAENPQAIVRVPIDATEGVDATLAARIADDIGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R +   +   L++AF  +D SL+E+NPL+   + RL  LD K++ DDNA +RH D  
Sbjct: 163 AAVRDEAVRILRGLWEAFQAEDASLVEVNPLVRTLDDRLIALDGKVTLDDNADFRHPDRA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D S  D  E +AK   L Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 RFADPSAADPLEAKAKAAGLHYVKLDGEVGVIGNGAGLVMSTLDVVAYAGETYGGIRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----K 350
           FLD+GGGA  + +AA   ++ +D +V+ +L+N+FGGI  CD + +GI++A + +     +
Sbjct: 283 FLDIGGGASAEVMAAGLTVVLADPAVRAVLVNVFGGITACDAVARGIVAAFENLIAAGER 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           I++PLV+RL+G     G  ++A + L  V     +DDAA+++    
Sbjct: 343 IDVPLVVRLDGNRAAEGRAILAAAQLPRVEQVETMDDAARRVAELA 388


>gi|209879644|ref|XP_002141262.1| succinyl-CoA synthetase, beta subunit [Cryptosporidium muris RN66]
 gi|209556868|gb|EEA06913.1| succinyl-CoA synthetase, beta subunit, putative [Cryptosporidium
           muris RN66]
          Length = 472

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 155/448 (34%), Positives = 248/448 (55%), Gaps = 55/448 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY------VVKSQIHAGGR 54
           +++HEYQ+  LL+KY + + K  V +++   +   K L    +      V+K+Q+  GGR
Sbjct: 27  LHLHEYQSMELLKKYKLAIPKHGVATNLEEVKEIGKELAKQSHNKEFNLVIKAQVLTGGR 86

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           G G FKE   + +GGV+   +L  +I    ++LG TLITKQTG  G     V + +   I
Sbjct: 87  GLGYFKE--NNFQGGVQECKNLDQLIDISEKMLGKTLITKQTGLEGKICKKVLIVEKIPI 144

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL- 173
           L+E+YL++ +DR S     I   +GG  IE+ AK+ P  I K+ IDP  G+T +    + 
Sbjct: 145 LKEMYLAIALDRESASTCIIFCPEGGTSIEDKAKENPNNIHKICIDPKEGLTRDITNKIS 204

Query: 174 ----------------------------------CDMLELQGQARIDGGDLFPNLYKAFC 199
                                                +      + +  ++   LY+ F 
Sbjct: 205 NILLGEYFGNIKDMKSDNFLNLNINKKNLKYFDKIFKMNEVEMLKNEMYEIVNKLYQLFR 264

Query: 200 DKDMSLLEINPLIIMKN----------GRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           + D +L+E+NPL++ KN            L + D KI+ DDNA YR  ++ ++ DV ++D
Sbjct: 265 ETDSTLIEVNPLVLKKNIPKLRDNDSIKNLLICDIKINIDDNASYRQKELFDIEDVEQKD 324

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
             E+EA ++ L+YI L+GN+GC+VNGAGLAMATMDIIK Y   PANFLD+GG A +++V 
Sbjct: 325 QIEVEAAKYGLNYIRLNGNVGCIVNGAGLAMATMDIIKFYNAEPANFLDLGGTAQKEQVC 384

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            A +I+ +D++VK I++N+F GI+R DV+ +GI+ AV+ + I  P+V+RL+G N++    
Sbjct: 385 KALEILHNDNNVKVIMVNVFAGIVRADVVAEGIIEAVETLNIKKPIVVRLQGTNIEQAKV 444

Query: 370 LIAESG--LNVITAIDLDDAAQKIVHAV 395
           L+ +    +N+    DLD  A+K +  +
Sbjct: 445 LMDKKKDSINITFCTDLDSTAKKAISYI 472


>gi|29829995|ref|NP_824629.1| succinyl-CoA synthetase subunit beta [Streptomyces avermitilis
           MA-4680]
 gi|29607105|dbj|BAC71164.1| putative succinyl-CoA synthetase beta subunit [Streptomyces
           avermitilis MA-4680]
          Length = 392

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 140/398 (35%), Positives = 221/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + +   +IL E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ +D + GV+ E    +  + + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVDAVEGVSIEKAREIVALAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL  + +G +  LD K+S D+NA +R  D 
Sbjct: 163 PAEVAEKVAEVLVTLWDTFVAEDALLVEVNPLAKVASGDILALDGKVSLDENAEFRQADH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
             L D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 AALEDKASANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAQVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++  PLV+RL+G N ++G R+++++   ++  +D  D 
Sbjct: 343 EVTKPLVVRLDGNNAELGRRILSDANHPLVQRVDTMDG 380


>gi|307128580|ref|YP_003880610.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           CARI]
 gi|306483042|gb|ADM89912.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           CARI]
          Length = 392

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 151/402 (37%), Positives = 231/402 (57%), Gaps = 23/402 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MNIHEYQA+ +L+ + + V   ++ S++     A K +       + V+K+QIHA     
Sbjct: 1   MNIHEYQAQKILKTFGIKVPYSILASNLEETVYAAKKVFKKTKNYICVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DIL 115
                      GG+++  S+  V      ILG  L+T QT   G  VN V + +   +  
Sbjct: 56  -----GGRGKGGGIKIAKSIDDVYKKSSNILGRRLVTNQTNKKGKLVNKVIISEYVLNSD 110

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           +E Y+S+  DR       + S +GG++IE+++K    KI+   IDP IG+    +  +  
Sbjct: 111 KEYYVSIFYDRNIYKNIILYSKEGGLEIEDISK----KIYFQKIDPYIGLQEFQIRKIAF 166

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            L+++  A     +    LY A+   D SL EINP +I  +  +  +D+K+  DDNA +R
Sbjct: 167 HLKMKYSA---FNNFIKKLYNAYIYSDASLFEINPFLITNDNEILAIDAKVRLDDNAFFR 223

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           +L  +E+ D  E    E+EAK+  L+++ LDGN+ CMVNGAGLAMATMD+IK+YG  PAN
Sbjct: 224 NLSYKEMSDEREYSIIELEAKKAGLNFLKLDGNVACMVNGAGLAMATMDMIKIYGANPAN 283

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-KEVKINIP 354
           FLD+GG AD  ++     +I  D  VK ILINIFGGI+RCD++ +GI+    K+ KIN+P
Sbjct: 284 FLDLGGKADSKRIKKGLDLILKDKKVKLILINIFGGIVRCDIVAEGIIKFFEKKNKINLP 343

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +++RLEG NV+I  +++  S L+      L++AA KI   +K
Sbjct: 344 IIIRLEGTNVNIAKKILNNSKLHYYYVTSLEEAANKIKVLLK 385


>gi|302558887|ref|ZP_07311229.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
 gi|302476505|gb|EFL39598.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
          Length = 392

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 136/398 (34%), Positives = 219/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + +   +IL E Y
Sbjct: 57  -------GGVKLAATPDEAVEHATNILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GG++IEEVA   P+ + K  ID   GVT      + +    
Sbjct: 103 VSFLLDRANRTFLSIASVEGGVEIEEVAASRPEAVAKTPIDANEGVTPAKAREIVEAANF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F  +D  L+E+NPL  + +G +  LD K+S D+NA +R  + 
Sbjct: 163 PAEVADKVANVLVTLWKTFVAEDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRQPEH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L+D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALQDKASANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV----- 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +     
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADRGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 EVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|145596325|ref|YP_001160622.1| succinyl-CoA synthetase subunit beta [Salinispora tropica CNB-440]
 gi|189081796|sp|A4XBE5|SUCC_SALTO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|145305662|gb|ABP56244.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Salinispora
           tropica CNB-440]
          Length = 392

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/397 (34%), Positives = 215/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    +  ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLTEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P+K+ K  ID   GV       +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKEPIDANTGVDVATARRIVTQAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++  +L+KAF  +D +L+E+NPL     G L +LD+K+S D+NA +RH D +
Sbjct: 163 AEVADQTVEIAVDLWKAFVAEDATLVEVNPLAKTAEGGLLLLDAKVSLDENAAFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQAAVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A   +I+ SD +VK + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPAVKSVFVNVFGGITACDAVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  PLV+RL+G N + G  ++  +   +I  +D  D 
Sbjct: 343 VTRPLVVRLDGNNAEAGRAILDGANNPLIQRVDTMDG 379


>gi|229821498|ref|YP_002883024.1| succinyl-CoA synthetase, beta subunit [Beutenbergia cavernae DSM
           12333]
 gi|259511777|sp|C5BZT2|SUCC_BEUC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|229567411|gb|ACQ81262.1| succinyl-CoA synthetase, beta subunit [Beutenbergia cavernae DSM
           12333]
          Length = 395

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 139/395 (35%), Positives = 225/395 (56%), Gaps = 27/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M++ EYQA+ +  K+ VPV  G+V ++V  A +A +TL    G + VVK+Q+  GGRGK 
Sbjct: 1   MDLFEYQARDVFEKHGVPVLGGIVATTVDEARAAAETLTSGAGSVVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  S +       +ILG  +        G  V+ V + +GA I  E
Sbjct: 61  ----------GGVKLARSPEEAAEAAEQILGMDI-------KGHTVHRVMIAEGASIAEE 103

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            Y S+L+DR +     +AS +GG++IE++A + P+ + ++ +DPL+G+ +   A +    
Sbjct: 104 YYFSVLLDRANRSYLAMASVEGGVEIEQLAVERPEALARVAVDPLVGIDAAKAAEIVAAA 163

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                      D+   L+  +  +D +L+E+NPL+   +GR+  LD K++ DDNA +RH 
Sbjct: 164 GFADDVAGAVADVIQKLWTVYDAEDATLVEVNPLVRTTDGRVIALDGKVTLDDNAEFRHP 223

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----A 292
           +  EL D +  D  E +AK H+L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 224 EHAELEDAASADPLEAKAKAHDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVK 283

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--K 350
           PANFLD+GGGA    +AA   +I  D  VK + +N+FGGI  CD + +GI+ A++ +  K
Sbjct: 284 PANFLDIGGGASAAVMAAGLDVILGDPQVKSVFVNVFGGITACDEVARGIVQALEILGDK 343

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
            N PLV+RL+G  V+ G  ++AE+   ++T  +  
Sbjct: 344 ENKPLVVRLDGNAVEEGRAILAEANHPLVTLAETM 378


>gi|182436516|ref|YP_001824235.1| succinyl-CoA synthetase subunit beta [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326777138|ref|ZP_08236403.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Streptomyces cf.
           griseus XylebKG-1]
 gi|226734992|sp|B1W3P6|SUCC_STRGG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|178465032|dbj|BAG19552.1| putative succinyl-CoA synthetase beta chain [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326657471|gb|EGE42317.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Streptomyces cf.
           griseus XylebKG-1]
          Length = 393

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 138/398 (34%), Positives = 216/398 (54%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATEKLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + +   +I  E Y
Sbjct: 57  -------GGVKLAADPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++ + GV       +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGVDIAKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    +    L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R  D 
Sbjct: 163 PADVAEGVAEALVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPDH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D    +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKDAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  V+ + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVRSVFVNVFGGITACDEVANGIVQALALLESKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           K+  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|284029243|ref|YP_003379174.1| succinyl-CoA synthetase subunit beta [Kribbella flavida DSM 17836]
 gi|283808536|gb|ADB30375.1| succinyl-CoA synthetase, beta subunit [Kribbella flavida DSM 17836]
          Length = 390

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 144/397 (36%), Positives = 212/397 (53%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK +  K+ V    G V+++   A +A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLMEYQAKTVFAKHGVRTTVGEVVTTPEQARAAAEKIGGTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ SS        REILG  +        G  V  + +   A I  E Y 
Sbjct: 57  -------GGVKLASSPDEAEQKAREILGLDI-------KGHVVKTLNIVPAAAIGEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGM+IEEVA   P  + K+ IDP  GV       + +     
Sbjct: 103 SFLIDRANRNYLCIASAAGGMEIEEVAHTNPDAVAKISIDPATGVDEALAREIAEQAGYP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        LY+ F  +D SL+E+NPL+ +++G +  LD K++ D+NA +RH D  
Sbjct: 163 ADVLDAAAVEIAKLYQVFIAEDASLVEVNPLVKLEDGNVEALDGKVTLDENADFRHPDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  D S ED  E  AK   L+Y+ LDG++G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFEDSSAEDPLEAAAKAKGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEQFGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-----K 350
           FLD+GGGA  + +A   +II SD  V+ + +N+FGGI  CD +  GI+ A + +      
Sbjct: 283 FLDIGGGASAEVMANGLEIIISDPQVESVFVNVFGGITACDAVANGIVQAFELLAGRGEA 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +N PLV+RL+G N + G R++ E+GL  +  +D  D 
Sbjct: 343 VNKPLVVRLDGNNAEEGRRILDEAGLAGLERVDTMDG 379


>gi|163839116|ref|YP_001623521.1| succinyl-CoA synthetase subunit beta [Renibacterium salmoninarum
           ATCC 33209]
 gi|189081779|sp|A9WKU9|SUCC_RENSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|162952592|gb|ABY22107.1| succinyl-CoA synthetase beta chain [Renibacterium salmoninarum ATCC
           33209]
          Length = 389

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 136/403 (33%), Positives = 222/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +   + VPV  G+V ++   A++A + + G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDMFEAHGVPVLAGIVANTAEEAKAAAEKIGG-VTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +          ILG  +        G  V+ V +  GADI  E Y 
Sbjct: 57  -------GGVKVAKTADEAFEYAGNILGMDI-------KGHTVHKVMIAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG++IE +A + P+ + ++ +DP +G+       + D     
Sbjct: 103 SVLLDRANRNYLAMCSVEGGVEIEVLAVERPEALARIAVDPAVGIDQAKAEEIVDAAGFA 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   +    L+  F  +D +L+E+NPL+   +GR+  LD K++ D NA +RH D +
Sbjct: 163 ADVLDGVIETIKKLWDVFQKEDATLVEVNPLVKTGDGRILALDGKVTLDANADFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D    D  E +AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKDSADPLEAKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGESHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A++ +    N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVKALEILGTSANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++ E+   ++T A  +D+ A K     
Sbjct: 343 PLVVRLDGNNVEEGRRILTEANHPLVTQAATMDEGADKAAELA 385


>gi|258651502|ref|YP_003200658.1| succinyl-CoA synthetase subunit beta [Nakamurella multipartita DSM
           44233]
 gi|258554727|gb|ACV77669.1| succinyl-CoA synthetase, beta subunit [Nakamurella multipartita DSM
           44233]
          Length = 400

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 218/403 (54%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VP   G V  +V  A +A + L  P+ V KSQ+  GGRGK    
Sbjct: 1   MDLYEYQAKELFVAHGVPAPAGRVARTVEEAVAAAQELGVPVMV-KSQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++L  V +    ILG  +        G     V +   ++I +E Y+
Sbjct: 57  -------GGVKFAATLDDVRTHAGNILGLDI-------KGHVTRQVLITPASEIAQEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     +A+  GGM+IE++A++ P  + ++ ++ L GV +E    +    +  
Sbjct: 103 SYLLDRSNRTFLAMATKDGGMEIEQLAEERPDALARIPVNALTGVDAEKAKEIAAAGKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   L+  F  +D +L+E+NPL+    G++  LD K+S D NA +RH +  
Sbjct: 163 ADVVDQVEAVLVGLWDTFVGEDATLVEVNPLVKDGEGKVVALDGKVSLDANADFRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D + E+  E+ AK+  L+Y+ LDG++G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALADTAAENPLEVAAKEKGLNYVKLDGDVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A   +II SD  VK + +N+FGGI  CD +  GI+ A+K +  +   
Sbjct: 283 FLDIGGGASAEVMANGLEIILSDPDVKAVFVNVFGGITACDAVANGIVGALKMLGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           PLV+RL+G NV  G  ++ E+    VI A  +D+ A K     
Sbjct: 343 PLVVRLDGNNVLEGRAILNEANHPLVIQAETMDEGADKAAELA 385


>gi|238060995|ref|ZP_04605704.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. ATCC
           39149]
 gi|237882806|gb|EEP71634.1| succinyl-CoA synthetase, beta subunit [Micromonospora sp. ATCC
           39149]
          Length = 392

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 134/397 (33%), Positives = 215/397 (54%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQ + L  ++ +PV  G V ++   A +  + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQGRDLFERHGLPVLAGGVANTPEEARAIAERLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++       ++   +ILG  +        G  V+ V +   AD+  E Y 
Sbjct: 57  -------GGVKLAEGTDETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS  GGMDIE+VA + P K+ K  ID + GV       +       
Sbjct: 103 SYLLDRANRTFLCIASVAGGMDIEQVAAETPDKVVKAPIDAVTGVDEAKAREIVTAAGFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      ++   L++AF  +D +L+E+NPL    +G+L +LD+K++ D+NA +RH D +
Sbjct: 163 AEVADQVVEVAVGLWQAFVAEDATLVEVNPLAKTGDGKLLLLDAKVTLDENAGFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E  AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDQAAVDPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGNVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA    +A   +I+ SD SV+ + +N+FGGI  CD +  GI+ A+     +  K
Sbjct: 283 FLDIGGGASAAVMANGLEIVLSDPSVRSVFVNVFGGITACDEVANGIVQALALLEQRGEK 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  PLV+RL+G N + G  ++  +   ++  +D  D 
Sbjct: 343 VAKPLVVRLDGNNAEAGRAILDGANNPLVQRVDTMDG 379


>gi|315656423|ref|ZP_07909312.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492982|gb|EFU82584.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 386

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 140/392 (35%), Positives = 220/392 (56%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+ VPV  G V S+V  A++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGVPVLPGKVASTVEEAKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   ++ + ILG  +        G  V  V V  G DI RE Y 
Sbjct: 58  -------GGVKLARSEEEAAANAQAILGMNI-------KGHTVYRVMVAAGTDIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+ +     + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALAKVPI-PASGMDTTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 SETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   +IT ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLITMMETMD 374


>gi|257051525|ref|YP_003129358.1| succinyl-CoA synthetase subunit beta [Halorhabdus utahensis DSM
           12940]
 gi|256690288|gb|ACV10625.1| succinyl-CoA synthetase, beta subunit [Halorhabdus utahensis DSM
           12940]
          Length = 381

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 21/399 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +  +  +PV    + ++V  A  A   +  P+ + K+Q+H GGRGK    
Sbjct: 1   MRLHEYQAKRVFAEAGIPVPDATLATTVEEAVDAAGEIGFPVAI-KAQVHVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++            +ILG  L        G  V+ V VE   D + ELY+
Sbjct: 57  -------GGIKLAEDADEAREAATDILGMDL-------KGYTVDRVLVEQAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR +G    + ST+GG++IEEVA + P  I +  +DP  G+             + 
Sbjct: 103 GVTMDRGAGKPVAMVSTKGGVNIEEVAAENPDAIAREHVDPAYGLHPYQARKAVYDAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY  + +KD S  EINP++I  +  +   D+  + DD+AL+R  +I 
Sbjct: 163 REVAGDVASILSTLYDLWDEKDGSDAEINPVMITDDDEVIAADAVFNVDDDALFRQSEIA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L   + +D  E  A ++   Y+ L GN+G + NGAGL M T+D++  YGG+PANFLD+G
Sbjct: 223 QLEGETTDDDLEAMANEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDHYGGSPANFLDIG 282

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRL 359
           GGA   +V  A +++ +D +V  ++ NIFGGI R D + +GI  A++E   I  P+ +RL
Sbjct: 283 GGAKAGRVRNALEVVFADDNVDSVVFNIFGGITRGDEVARGINEALEEFDTIPNPVTVRL 342

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            G N   G  ++    + V     L++A Q+ V   + V
Sbjct: 343 AGTNSVQGMEILNTDLVTVE--ETLEEAVQRAVADAEEV 379


>gi|259506005|ref|ZP_05748907.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259166486|gb|EEW51040.1| succinyl-CoA ligase [ADP-forming] subunit beta [Corynebacterium
           efficiens YS-314]
          Length = 399

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 137/395 (34%), Positives = 216/395 (54%), Gaps = 27/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   + VPV +G+V  +   A  A + L GP  VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEAHGVPVVRGIVADTPEDARRAAEELGGPT-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+    +        IL   +        G  V  V V +  DI  E Y 
Sbjct: 57  -------GGVRLAGDPQKAQEAAGAILSMDI-------KGHTVEQVMVVEAVDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +A++ P+ + ++ ++PL G+       +       
Sbjct: 103 SILLDRANRSYLAMCSMEGGMEIEVLARERPEALARVEVNPLTGIDDTKAREIARAAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LY+ + D+D +L+E+NPL++   G +  LD KI+ DDNA +RH + +
Sbjct: 163 DTIAQKIVPVLQQLYRVYHDEDATLVEVNPLVLTAEGEVLALDGKITLDDNADFRHDNRE 222

Query: 241 ELR-DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGG-APA 294
           EL       D  E+ AK++ L+Y+ LDG +G + NGAGL M+T+DI+      +GG APA
Sbjct: 223 ELVGSAGTTDPLELRAKKNGLNYVRLDGTVGIIGNGAGLVMSTLDIVAEAGQRHGGQAPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  D + A  ++I  D  V+ +L+N+FGGI  CD + +GI+ A++E+     
Sbjct: 283 NFLDIGGGASSDSMVAGLEVIMCDPQVRSVLVNVFGGITACDEVARGIVGALEELGDGAA 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDD 386
            P+V+RL+G NVD G  ++ E    ++T    +D+
Sbjct: 343 KPIVVRLDGHNVDKGREILEEFNHPLVTLVAGMDE 377


>gi|297201853|ref|ZP_06919250.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
 gi|297147985|gb|EFH28820.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
          Length = 392

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 138/398 (34%), Positives = 219/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + +   +I+ E Y
Sbjct: 57  -------GGVKLAATADEAVEHATNILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGM+IEEVA+  P+ + K  ID  +GVT E    + +    
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMEIEEVAETRPEAVAKTPIDANVGVTPEVARQIVEAANF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F ++D  L+E+NPL  + +G +  LD K+S D+NA +R    
Sbjct: 163 PAEVADKVENVLVTLWKTFIEEDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L+D    +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALQDKDAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|256397087|ref|YP_003118651.1| succinyl-CoA synthetase subunit beta [Catenulispora acidiphila DSM
           44928]
 gi|256363313|gb|ACU76810.1| succinyl-CoA synthetase, beta subunit [Catenulispora acidiphila DSM
           44928]
          Length = 392

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 137/407 (33%), Positives = 215/407 (52%), Gaps = 30/407 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ +  K+ VPV  G V  +   AE+A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDIFAKHGVPVLGGEVAETPEQAEAAAEKLGGRV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++             ILG  +        G  V+ V +   A+I  E Y+
Sbjct: 57  -------GGVKLAEGPADAKEKAAAILGMDI-------KGHTVHKVMLAQTAEIEAEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL---IGVTSEDVASLCDML 177
           S L+DR++     +AS +GGM+IEE+A   P+ + K+ +D      G++ E    +    
Sbjct: 103 SFLLDRSNRTFLAMASVEGGMEIEEIAVSKPEALAKVPVDAAAYHEGLSQEKADEIVKAA 162

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                           L+  F  +D +L+E+NPL+  K G++  LD K+S D+NA +RH 
Sbjct: 163 NFPHHVADQVAATLVTLWDVFVKEDATLVEVNPLVKTKAGKIVALDGKVSLDENASFRHE 222

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----A 292
           D + L D +  D  E +AK  +L+Y+ LDG +G + NGAGL M+T+D++   G       
Sbjct: 223 DHEALEDKASADPLEAKAKAKHLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVK 282

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI- 351
           PANFLD+GGGA  + +A    II +D +VK + +N+FGGI  CD +  GI+ A K +   
Sbjct: 283 PANFLDIGGGASAEVMANGLDIILNDPAVKSVFVNVFGGITACDAVANGIVEAFKLLGAE 342

Query: 352 --NIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
             + PLV+RL+G N ++G +++ ++ L  V     +D AA +     
Sbjct: 343 AGSKPLVVRLDGNNAELGRQILVDAKLPGVEQVDTMDGAADRAAELA 389


>gi|284165339|ref|YP_003403618.1| succinyl-CoA synthetase subunit beta [Haloterrigena turkmenica DSM
           5511]
 gi|284014994|gb|ADB60945.1| succinyl-CoA synthetase, beta subunit [Haloterrigena turkmenica DSM
           5511]
          Length = 384

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 134/400 (33%), Positives = 213/400 (53%), Gaps = 22/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     +P     + S V  A +A + +  P+  +K+Q+  GGRGK    
Sbjct: 3   MKLHEYQAKQVFADAGIPTPASELASDVDGAVAAAEEIGYPV-AIKAQVQVGGRGKA--- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++            EILG  L        G  V+ V VE+  D   ELY+
Sbjct: 59  -------GGIKLVEDEDEAREAADEILGMDL-------KGYHVDRVLVEEAVDFTNELYV 104

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  IDP  G+             + 
Sbjct: 105 GITMDRGEGKPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPYQARKAVYDAGVD 164

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY+ + D+D S  EINPL++  +  +   D+ ++ D++AL+R  ++ 
Sbjct: 165 QSIARDVSSVLTTLYQLWDDRDGSDAEINPLMVTSDDEVIAADAVMNIDEDALFRQPELA 224

Query: 241 ELRDVSE-EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           E+ + +   D  E +A +++  Y+ LDGN+G + NGAGL M T+D++  YGG PANFLDV
Sbjct: 225 EMEEEAAGGDELEQKADEYDFDYVRLDGNVGIIGNGAGLVMTTLDLVDHYGGEPANFLDV 284

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMR 358
           GGGA  +++A A  ++ SD +V  ++ NIFGGI R D + +GI  A+++  +I  P+V+R
Sbjct: 285 GGGAKAERIANALDMVFSDDNVDSVVFNIFGGITRGDEVARGINEALEQFDEIPKPVVVR 344

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           L G N + G  ++ E  + V     L+DA Q+ V     V
Sbjct: 345 LAGTNWEEGMEILNEDLVTVE--QTLEDAVQRAVEYAGEV 382


>gi|147677693|ref|YP_001211908.1| succinyl-CoA synthetase, beta subunit [Pelotomaculum
           thermopropionicum SI]
 gi|146273790|dbj|BAF59539.1| succinyl-CoA synthetase, beta subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 371

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 140/398 (35%), Positives = 208/398 (52%), Gaps = 30/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY  K L  KY +PV KG +  +   A      + GP  VVKSQ+  G RGK    
Sbjct: 1   MKMFEYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIGGPC-VVKSQVLIGKRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  +S +       E+   T+        G  V  V VE+   I +ELY+
Sbjct: 57  -------GGIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYM 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE-- 178
           S+ VD  + M   IAS  GGMDIEE  ++Y   I K  IDP +G+ +     +   +   
Sbjct: 103 SITVDGAAKMPVLIASAYGGMDIEEQPEEY---IIKKHIDPEMGMQAFIARDVVRQMGIS 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           L          +   LYK F ++D  L+EINPL+   + ++   D+K++ DD+AL+RH D
Sbjct: 160 LNSAHGKQLVSIIQTLYKIFKEQDAELVEINPLVFSDD-KVIAADAKVTIDDDALFRHKD 218

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  + D +  +     AK   LSY+ LDG+I  M NGAG+ M T+D ++ YGG PANFLD
Sbjct: 219 LPYVEDRTATEK---AAKDLGLSYVELDGDIAVMANGAGITMTTLDTLQYYGGRPANFLD 275

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
            GGG  ++  A A +++ +  + K I +NIFGGI RCD +   I    K+  I +P+V+R
Sbjct: 276 CGGGTGREVTAKALELLLT-KNPKVIFVNIFGGITRCDDVANAIADVKKDKGIPMPIVVR 334

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           L G N DIG  ++   G+ +     +++AAQK +   K
Sbjct: 335 LVGTNQDIGREILK--GVGIEAFDFMNEAAQKAIELTK 370


>gi|319947696|ref|ZP_08021910.1| succinyl-CoA synthetase subunit beta [Dietzia cinnamea P4]
 gi|319438646|gb|EFV93552.1| succinyl-CoA synthetase subunit beta [Dietzia cinnamea P4]
          Length = 388

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 140/404 (34%), Positives = 218/404 (53%), Gaps = 27/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL  K++VP   G V  +   AE     +  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKALFAKHDVPTTPGRVADTAEEAEKVAAEIGKPV-VVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++    K   +   +ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKLAEDAKEARARAEDILGLDI-------KGHIVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +     + S +GG++IE+VA++ P ++ K+ IDP  GV       +     L 
Sbjct: 103 SFLVDRANRNYLAMCSVEGGVEIEQVAEESPDRLAKINIDPTEGVDVAKAREIAKAGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD-I 239
            +           LY+ F  +D SL+E+NPL+   N  +  LD K++ D+NA +RH D  
Sbjct: 163 EEVLDAAAVTIAKLYEVFVKEDASLVEVNPLVRTPNDEILALDGKVTLDENAEFRHKDTF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
            +  D    D  E +A +++L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 ADFADAGTTDPLEQKAAENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +A    +I  D  VK + +N+FGGI  CD +  GI+ A++ +  + N
Sbjct: 283 NFLDIGGGASAEVMANGLDVILGDEQVKSVFVNVFGGITACDAVANGIVKALEILGDEAN 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G NV+ G +++AE+   ++T A ++D  A K     
Sbjct: 343 KPLVVRLDGNNVEEGRKILAEANHPLVTLADNMDSGADKAAELA 386


>gi|70952059|ref|XP_745223.1| ATP-specific succinyl-CoA synthetase beta subunit, [Plasmodium
           chabaudi chabaudi]
 gi|56525479|emb|CAH78828.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Plasmodium chabaudi chabaudi]
          Length = 338

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 134/318 (42%), Positives = 209/318 (65%)

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
            +     ++L +TL+TKQTGP G + N V++ +   I +E Y++ L+DR S  +  + S+
Sbjct: 5   EIKDVASKMLNNTLVTKQTGPEGKKCNTVFICERFYIRKERYVAFLLDRNSDNICLLGSS 64

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA 197
            GG  IE+++K  P+ I+K+ I+   G+T+      C+ +  +G       D+  NLYK 
Sbjct: 65  VGGSSIEDISKKTPEAIYKININIKDGLTNGQSREFCEQIGFKGNELDIATDMLVNLYKI 124

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQ 257
           F   D +LLEINPL    +GR+   D+K++FDDNA YR  +I + RD+++E+  E+EAK+
Sbjct: 125 FKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEYRQKEIFDKRDLTQENPEELEAKK 184

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITS 317
           +NL+Y++LDGNI CMVNGAGLAMAT+D+I L+ G+P+NFLDVGG A ++++A A KII +
Sbjct: 185 YNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNFLDVGGSATEEEIAEALKIIDN 244

Query: 318 DSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLN 377
           +   K   INI GGIMRCD++ +GI++A K+++   PL++RLEG N     +++ ES + 
Sbjct: 245 NDKAKVCFINILGGIMRCDIIARGIINAAKQIQFKKPLIVRLEGTNEKEAIKILEESNIK 304

Query: 378 VITAIDLDDAAQKIVHAV 395
            I   D++ AA+K V   
Sbjct: 305 CIICQDMNLAAEKAVALA 322


>gi|302536354|ref|ZP_07288696.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. C]
 gi|302445249|gb|EFL17065.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. C]
          Length = 392

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 137/398 (34%), Positives = 223/398 (56%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATEKLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + +   +IL E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS  GGMDIE+VA++ P+K+ K+ ++   GVT E    + ++ + 
Sbjct: 103 VSYLLDRTNRTFLAMASVAGGMDIEQVAEETPEKLAKVPVNANEGVTIEKAREIVELAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+K F  +D  L+E+NPL  + +G +  LD K+S D+NA +R    
Sbjct: 163 PAEVAEKVAEVLVTLWKTFIAEDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRQPSH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +E  D +  +  E  AK+  L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EEFVDHAAANPLEAAAKEKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA    +A   +II  D  VK + +N+FGGI  CD +  GI+ A+K ++    
Sbjct: 283 NFLDIGGGASAAVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 AVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|307595219|ref|YP_003901536.1| succinyl-CoA synthetase subunit beta [Vulcanisaeta distributa DSM
           14429]
 gi|307550420|gb|ADN50485.1| succinyl-CoA synthetase, beta subunit [Vulcanisaeta distributa DSM
           14429]
          Length = 374

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 151/394 (38%), Positives = 230/394 (58%), Gaps = 22/394 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+ K LL KY V + +G ++ S++  +  + TL  PL+  K+Q+   GR K    
Sbjct: 1   MRLLEYKGKELLNKYGVKIPRGAIVKSLNDID-ILNTLKFPLFA-KAQVPFAGRAKMGL- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                    VR  +++K   +  R+ LG  +           +  V  E+G ++ +ELY+
Sbjct: 58  ---------VRRVNTIKDAENAARDYLGKVI-------QDYPIRKVLFEEGVNVAKELYI 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     +AST+GG+DIEEVA+  P+KI +L ID   G+    +  +   L L+
Sbjct: 102 SITLDRENRGYLMLASTEGGIDIEEVARRSPEKIIRLYIDDYEGLRDYMIRGVAQKLGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   +   +Y+ F + D  L+EINPL +  +G+L  LD K+  DDN+LYRH DI 
Sbjct: 162 GSAAQDFVTVAKAMYRVFTEYDAELVEINPLALTTDGQLVALDVKVMIDDNSLYRHPDIS 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              + S+  + E+EA+++ L Y+ L G +G M NGAGL MATMD++K +G  PA+FLDVG
Sbjct: 222 I--EDSDYTTEELEARKYGLHYVELTGYVGIMANGAGLTMATMDLVKEFGHEPADFLDVG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V    K++ +D  +K +LINIFGGI RCD + KG++ A+ EVK N P+ +RL+
Sbjct: 280 GGASKDAVREGLKMLLTDDRIKAVLINIFGGITRCDEVAKGVVEALNEVKTNKPIFIRLK 339

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVH 393
           G N + G R++AE GL    TA +   A  K + 
Sbjct: 340 GTNEEEGRRILAEIGLKTYETAEEAMGALSKAIA 373


>gi|111022539|ref|YP_705511.1| succinyl-CoA synthetase subunit beta [Rhodococcus jostii RHA1]
 gi|123144369|sp|Q0S533|SUCC_RHOSR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|110822069|gb|ABG97353.1| succinate--CoA ligase beta subunit [Rhodococcus jostii RHA1]
          Length = 389

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 133/403 (33%), Positives = 222/403 (55%), Gaps = 26/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP + G V  +V  A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHEVPTSAGRVTDTVAGAREIAEEIGKPVMV-KAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  +   +  ++   ILG  +        G  V  + V + +DI  E Y+
Sbjct: 57  -------GGVKYSADADAAQANAEAILGLDI-------KGHVVKKLLVAEASDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     + S +GG++IE  A++ P  + K+ +D + GV      S+ +  +L 
Sbjct: 103 SFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F ++D  L+E+NPL+   + ++  LD K++ D+NA +R    +
Sbjct: 163 AEVLDAAAVTIQKLWEVFINEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D    D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 AFEDKDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  + N 
Sbjct: 283 FLDIGGGASAEVMANGLDVILNDAQVKSVFVNVFGGITACDAVANGIVGALKTLGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAV 395
           PLV+RL+G NV+ G R++AE+   ++T +  +D+AA K     
Sbjct: 343 PLVVRLDGNNVEEGRRILAEAAHPLVTVVGTMDEAADKAAELA 385


>gi|124027100|ref|YP_001012420.1| succinyl-CoA synthetase beta chain [Hyperthermus butylicus DSM
           5456]
 gi|123977794|gb|ABM80075.1| Succinyl-CoA synthetase beta chain [Hyperthermus butylicus DSM
           5456]
          Length = 377

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 138/397 (34%), Positives = 218/397 (54%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAGGRGKGRF 59
           M + E++AK +LRKY   V  GVVI+    A   I      P  +VKSQ+   GRGK   
Sbjct: 1   MKLFEFEAKEILRKYGADVPPGVVIARGEDAREKILEAGLEPPLMVKSQVLVAGRGKA-- 58

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+R  +S+   +  + E+        +T   G +   + VE   +   ELY
Sbjct: 59  --------GGIRRANSIDEAVRLVGELF-------ETPIKGLKPRYILVEKAVEHEAELY 103

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++ +DR+      + S  GGMDIEE+A++ P+ I ++ +DP++G+       L   + L
Sbjct: 104 TAITLDRSKRRPVVLVSRYGGMDIEEIAREKPESIIRMHVDPVLGLRGYHARKLGKAIGL 163

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+A          +Y+ F D D  L+E NPL ++ + ++  LD++I  DDNALYRH ++
Sbjct: 164 SGRALTSFAAFLQAMYQVFVDYDAELVESNPLGLVGD-KVIPLDARIIVDDNALYRHQEL 222

Query: 240 Q-ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
             ++ +  E    EI+A++  L+++ LDG+IG + NGAGL MATMD++  +GG PANFLD
Sbjct: 223 AKDIEETGEYSEWEIKARRQGLAFVELDGDIGIIGNGAGLTMATMDLVYEHGGRPANFLD 282

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE-VKINIPLVM 357
           +GGGA  + V  A   +      + I INIFGGI RCD + +G++ A+KE   +  P+V+
Sbjct: 283 IGGGASAEAVKRAVLFLFEYPKARKIFINIFGGITRCDEVARGVVEAIKEAGGLRKPIVI 342

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           RL G N + G R++ E G  +    D  +A ++I+  
Sbjct: 343 RLTGTNEEEGRRILREHG--IEAFDDPFEAVKRIISL 377


>gi|307330698|ref|ZP_07609836.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
 gi|306883677|gb|EFN14725.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
          Length = 397

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/396 (34%), Positives = 217/396 (54%), Gaps = 28/396 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK     
Sbjct: 9   DLFEYQARDLFAKHGVPVLAGEVIDTPEAAREVAERLGG-RAVVKAQVKVGGRGKA---- 63

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++ S     +    +ILG  +        G  V+ V +   ADI  E Y+S
Sbjct: 64  ------GGVKLASDPADAVEKAGQILGMDI-------KGHTVHKVMLAQTADIKEEYYVS 110

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            L+DRT+     +AS +GG++IE VA+  P+ + K+ +D + GVT E  A +    +   
Sbjct: 111 FLLDRTNRTFLAMASVEGGVEIEVVAEQNPEALAKIPVDAIEGVTQEKAAEIVAAAKFPA 170

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +      ++   L+  F  +D  L+E+NPL+   +G++  LD K+S D+NA +R  + + 
Sbjct: 171 EIADQVVEVLQKLWVVFIKEDALLVEVNPLVKADDGKIIALDGKVSLDENAAFRQPEHEA 230

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANF 296
           L D +  +  E  AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PANF
Sbjct: 231 LEDKAAANPLEAAAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPANF 290

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-----I 351
           LD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K     +
Sbjct: 291 LDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGEDV 350

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           + PLV+RL+G N ++G +++ ++   ++  +D  D 
Sbjct: 351 SKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMDG 386


>gi|239943707|ref|ZP_04695644.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           15998]
 gi|239990157|ref|ZP_04710821.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           11379]
 gi|291447169|ref|ZP_06586559.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           15998]
 gi|291350116|gb|EFE77020.1| succinyl-CoA synthetase subunit beta [Streptomyces roseosporus NRRL
           15998]
          Length = 393

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 139/398 (34%), Positives = 217/398 (54%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATEKLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + +   +I  E Y
Sbjct: 57  -------GGVKLAADADEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ +D   GV       +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVDSNSGVDIVKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      ++   L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R    
Sbjct: 163 PAEVAEKVAEVLVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGDVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALALLESKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           K+  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 KVEKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|317508744|ref|ZP_07966396.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974]
 gi|316252959|gb|EFV12377.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974]
          Length = 388

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 134/393 (34%), Positives = 206/393 (52%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELYLKHGVPTTPGAVTDTPEGAREIAERIGKPVMV-KAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + + + ADI  E Y 
Sbjct: 57  -------GGVKYAATPEDAYEHAKNILGLDI-------KGHVVKRLLIAEAADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR+ G    I S+ GGM+IEEVA   P+K+ K+ +D   GV       L     L 
Sbjct: 103 SFLLDRSVGGFIAIVSSAGGMEIEEVAHTTPEKVAKIPVDYNAGVDVAKARELAVAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        L++ F  +D +L+E+NPL    + ++  LD K++ D NA +RH D +
Sbjct: 163 EAVLDKAAVTISKLWEVFVKEDATLVEVNPLARTTDDQILALDGKVTLDGNAEFRHPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E     E+D  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFAVAVEQDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEGHKDVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA    +AA   +I  D  VK + +N+FGGI  CD +  GI+ A+  +      
Sbjct: 283 FLDIGGGASASVMAAGLDVILGDEQVKSVFVNVFGGITACDAVANGIVGALDTLGDTATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           P+V+RL+G NV++G +++AE    ++T +   D
Sbjct: 343 PIVVRLDGNNVELGRQILAERAHPLVTEVGTMD 375


>gi|312136261|ref|YP_004003598.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanothermus
           fervidus DSM 2088]
 gi|311223980|gb|ADP76836.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanothermus
           fervidus DSM 2088]
          Length = 367

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 130/395 (32%), Positives = 206/395 (52%), Gaps = 32/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY AK L +   +P+ +G V  +      A K +  P+  +K+Q+  GGRGK    
Sbjct: 1   MKLYEYNAKKLFKMEGIPIPEGYVAKNPDEVYEASKKINAPV-ALKAQVLVGGRGKS--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  SS K+     + +  + +        G +V  + +E+  DI  ELY+
Sbjct: 57  -------GGIKFASSPKNAYDLSKSLFNTKI-------KGEKVKKILIEEKIDIKEELYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     + S  GG+D+EE  ++    I K  ++PL      +   +   + L+
Sbjct: 103 SVIIDRAAKKPLIMGSVHGGVDVEEKVREN--SIVKYHVNPLDKFMPYEGREIARKMGLE 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                  G++    YK F   D  L+EINPL I  + ++  LD+KI  D + +YRH +IQ
Sbjct: 161 SNLIPKVGNIIWKTYKLFKKYDAKLVEINPLAITPDNKVIALDAKIDLDYDGVYRHPEIQ 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L +           K+   ++  LDG+I  + NGAGL +A MDII LYGG PA FLD+G
Sbjct: 221 NLEEY----------KEREFAFTKLDGDIAVIGNGAGLTLAAMDIISLYGGKPATFLDIG 270

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +  A   ++S S+VK I +NI GGI R D + KGI+ A  E+  +IP+V+RL 
Sbjct: 271 GGASSEVIEKALNFVSSLSNVKVIFVNILGGITRADEVAKGIVKASNELDRDIPIVIRLT 330

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N   G+ ++  +G+   T   L+ AA+K V   
Sbjct: 331 GTNQRKGHEILKNAGIPFET--SLEKAAKKAVEIS 363


>gi|304390800|ref|ZP_07372752.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304325683|gb|EFL92929.1| succinyl-CoA ligase subunit beta [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 386

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 138/392 (35%), Positives = 219/392 (55%), Gaps = 24/392 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L  K+  PV  G V S+V  A++A   L  PL VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFNKHGAPVLPGKVASTVEEAKAAFTALEVPLAVVKAQVKTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S +   ++ + ILG  +        G  V  V V  G DI RE Y 
Sbjct: 58  -------GGVKLARSEEEAAANAQAILGMNI-------KGHTVYRVMVAAGTDIDREFYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE++AK+ P+ + K+ I P  G+ +     + D     
Sbjct: 104 SILLDRANRQNLAMCSVEGGMEIEQLAKEKPEALAKVPI-PASGMDTTVARQIADEAGFD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  +  +D +L+E+NPL+    G +  LD K++ DDNA YRH +  
Sbjct: 163 SETAAKVVPVFLKLWDVYTGEDATLVEVNPLVATPQGDIIALDGKVTLDDNARYRHPEHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL----YGGAPANF 296
           EL D    D RE++A++  L+Y+ L+G +G + NGAGL M+T+D++      YG  PANF
Sbjct: 223 ELVDQRAADERELKAQEAGLNYVRLEGQVGIIGNGAGLVMSTLDVVAYAGEKYGTKPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A    +I +D  VK   +N+FGGI  CD +  GI+ A++ +  +   P
Sbjct: 283 LDIGGGASAEVMAKGLDVILTDPQVKSCFVNVFGGITACDEVANGIIGALQILGDQATKP 342

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G  V+ G  ++  +   ++T ++  D
Sbjct: 343 LVVRLDGNKVEEGRAILKAANHPLVTMMETMD 374


>gi|320009001|gb|ADW03851.1| succinyl-CoA synthetase, beta subunit [Streptomyces flavogriseus
           ATCC 33331]
          Length = 393

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/398 (34%), Positives = 220/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + +   +I  E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++ + GV  E    +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGVDIEKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      +    L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R    
Sbjct: 163 PAEVAEGVAEAMVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ L+G +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDEVANGIVQALELLKTKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|300782733|ref|YP_003763024.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
 gi|299792247|gb|ADJ42622.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
          Length = 389

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 129/393 (32%), Positives = 214/393 (54%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L   + VPV  G V S+   A++A + +   + V  +Q+  GGRGK    
Sbjct: 1   MDLYEYQARDLFAAHGVPVLPGSVASTPEEAKAAAEHIGNQVVVK-AQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G     V V + +DI  E Y 
Sbjct: 57  -------GGVKLAQTPDEAKEKAEAILGLDI-------KGHITRRVLVAEASDIASEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     +AS++GGM+IE++A + P+ + K+ +D + GV       +       
Sbjct: 103 SFLLDRSNRTFLAMASSEGGMEIEQLAVERPEALAKIPVDSITGVDKAKALEILKAGNFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  D+   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +R    +
Sbjct: 163 ADIIDEAADVVVKLWETFVSEDATLVEVNPLVRDPQDKIIALDGKVTLDENADFRQPGHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D   E+  E +AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALVDKDAENPLEAKAKAKNLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  +   
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDTDVKSVFVNVFGGITACDAVANGIVEALKILGDEATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV  G +++A++   ++T +D  D
Sbjct: 343 PLVVRLDGNNVVEGRQILADANHPLVTVVDTMD 375


>gi|313901647|ref|ZP_07835082.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468089|gb|EFR63568.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 373

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 141/396 (35%), Positives = 210/396 (53%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK + R+  +P  +G V ++   A      + GP+ V KSQ+ AGGRGK    
Sbjct: 1   MKFFEYMAKEVFRERGIPTPRGRVAATPEEAARVAAEVGGPVAV-KSQVLAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +         ++LG  +        G RV  V VE+   I RELYL
Sbjct: 57  -------GGIRFADTPDQARQVAADLLGQEV-------RGYRVERVLVEEKLRIDRELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + VD    +   IAS  GG++IEEV +     I K  +D  +G+       +   L L+
Sbjct: 103 GIAVDTGRKLPLVIASVHGGVNIEEVPEKD---IVKRPVDITLGLYPYFARGIARRLGLE 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       DL   LY+ F D D  L+EINPL+I  + RL   D +++ DD++ +RH D+ 
Sbjct: 160 GAVARQFADLLTRLYRIFRDYDAELVEINPLVISGD-RLIAADGRLNIDDDSRFRHEDLP 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + +E + R    ++  LSY+ LDG+I  M NGAG+ MAT+D++  YGG   NFLD G
Sbjct: 219 EVSEATELEQRV---REIGLSYVELDGDIAVMANGAGITMATIDVLAEYGGRAMNFLDAG 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +A A  ++ S ++ K I +NIFGGI RCD +   I++  ++  I +PLV+RL 
Sbjct: 276 GGAAVEPMAKAMAVLVS-TNPKAIFVNIFGGITRCDDVANAIVTVKQQQGIPVPLVVRLV 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D G  ++ E G  +    D+ +AA+K V   +
Sbjct: 335 GTNEDKGVAILREHG--IEAFRDMGEAARKAVELAR 368


>gi|297203635|ref|ZP_06921032.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
 gi|197717231|gb|EDY61265.1| succinyl-CoA synthetase subunit beta [Streptomyces sviceus ATCC
           29083]
          Length = 376

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 133/396 (33%), Positives = 207/396 (52%), Gaps = 24/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E++A+AL  +  +PV +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHEARALFEERGIPVPRAEVTDSPQEARVMARRLGGSV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +         R ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVRLATDPAEAERTARRILGKDI-------KGHPVRKVMLAQPVDIESEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + ++DR +G    IAS +GG DIEEVA   P+ + ++ +DP  GVTS     + +   L 
Sbjct: 103 AYVLDRAAGRFLAIASAEGGTDIEEVAAVRPEAVARIPVDPAEGVTSAKAGEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L++    +D  L+E+NPL+  + G +  LD K++ DDNA +R     
Sbjct: 163 P----QTVDVLVRLWEVLVGQDAVLVEVNPLVRTRQGHILALDGKVTLDDNARFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
               ++ +D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 A-ETIAHDDPLEAAAAAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK + +N+FGGI  CD +  GI+ A+ EV++  PLV+RL+
Sbjct: 278 GGASAQVMADGLTVILSDPAVKSVFVNVFGGITACDAVADGIVRALDEVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAV 395
           G N   G  ++ E    ++  A  +D A ++     
Sbjct: 338 GNNASRGRAVLDERAHPLVQQATTMDGAVRRAAELA 373


>gi|18044735|gb|AAH19868.1|AAH19868 Unknown (protein for IMAGE:4996134) [Homo sapiens]
          Length = 321

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 137/308 (44%), Positives = 190/308 (61%)

Query: 79  VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQ 138
           V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S Q
Sbjct: 2   VGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQ 61

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAF 198
           GG+DIEEVA   P+ IFK  ID   G+       + + L   G  +    D    LY  F
Sbjct: 62  GGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLF 121

Query: 199 CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQH 258
              D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA ++
Sbjct: 122 LKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKY 181

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSD 318
           +L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D
Sbjct: 182 DLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTAD 241

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
             V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL +
Sbjct: 242 PKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 301

Query: 379 ITAIDLDD 386
            +AIDL+D
Sbjct: 302 TSAIDLED 309


>gi|282860913|ref|ZP_06269979.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. ACTE]
 gi|282564649|gb|EFB70185.1| succinyl-CoA synthetase, beta subunit [Streptomyces sp. ACTE]
          Length = 393

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/398 (34%), Positives = 217/398 (54%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA  A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ +     ++   +ILG  +        G  V+ V + +   +I  E Y
Sbjct: 57  -------GGVKLAADPDEAVARATDILGMDI-------KGHTVHKVMIAELSPEIEAEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DRT+     +AS QGGMDIEEVA+  P+ + K+ ++ + GV       +    + 
Sbjct: 103 VSYLLDRTNRTFLAMASVQGGMDIEEVAEKTPEALAKVPVNAVDGVDIAKAREIVAQAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    +    L+  F  +D  L+E+NPL+  K+GR+  LD K+S D+NA +R    
Sbjct: 163 PADVAEGVAEALVTLWDTFVAEDALLVEVNPLVKTKDGRILALDGKVSLDENADFRQPGH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           + L D +  +  E  AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EALEDKAAANPLEAAAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGDVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK---- 350
           NFLD+GGGA  + +A   +II  D  V+ + +N+FGGI  CD +  GI+ A++ +K    
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVRSVFVNVFGGITACDEVANGIVQALELLKTKGE 342

Query: 351 -INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
            +  PLV+RL+G N ++G ++++++   ++  +D  D 
Sbjct: 343 DVTKPLVVRLDGNNAELGRKILSDANHPLVQRVDTMDG 380


>gi|257388754|ref|YP_003178527.1| succinyl-CoA synthetase subunit beta [Halomicrobium mukohataei DSM
           12286]
 gi|257171061|gb|ACV48820.1| succinyl-CoA synthetase, beta subunit [Halomicrobium mukohataei DSM
           12286]
          Length = 382

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 135/400 (33%), Positives = 216/400 (54%), Gaps = 22/400 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     VP     + ++V  A  A + +  P+ + K+Q+  GGRGK    
Sbjct: 1   MKLHEYQAKQVFADAGVPTPASTLATTVDEAVDAAEEIGYPVAI-KAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++  +         +ILG  L        G  V+ V VE+  D + ELY+
Sbjct: 57  -------GGIKLAENADEAREYADDILGMDL-------KGLHVDRVLVEEAVDFVNELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P+ I +  IDP  G+       +     + 
Sbjct: 103 GVTMDRGEGKPVAMVSTRGGVNIEEVAEEEPEAIAREHIDPAFGMHHYQARKVVYDAGVD 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D   +   LY  + DKD S  EINPL++  +  +   D+ ++ DD+AL+RH D++
Sbjct: 163 REVANDVAGVLKTLYDLWEDKDGSDAEINPLMVTADDEVIAADAVMNVDDDALFRHPDLE 222

Query: 241 ELRDVSE-EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            + D ++  D  E +A ++   Y+ L GN+G + NGAGL M T+D++  +GG PANFLDV
Sbjct: 223 AMEDEADGGDELEQKADEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDHFGGEPANFLDV 282

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMR 358
           GGGA   ++A A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I  P+V+R
Sbjct: 283 GGGAKAQRIANALDMVFSDDNVDSVVFNIFGGITRGDEVAKGINQALEQFDEIPKPVVVR 342

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           L G N   G  ++ E  + V     L+DA ++ V   + V
Sbjct: 343 LAGTNATEGMEILNEDLVTVE--QTLEDAVERAVIYAEEV 380


>gi|290956175|ref|YP_003487357.1| succinyl-coa synthetase subunit beta [Streptomyces scabiei 87.22]
 gi|260645701|emb|CBG68792.1| succinyl-coa synthetase beta chain [Streptomyces scabiei 87.22]
          Length = 376

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 134/396 (33%), Positives = 211/396 (53%), Gaps = 24/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QA+AL  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQARALFEEHGIAVPRAEVTDSPKEAREIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG+ +        G  V  V + +   I  E Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGTDI-------KGHTVRTVMIAEPVAIESEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS +GGMDIEEVA   P+ + ++ +DP  GVTS   + + +   L 
Sbjct: 103 SYVLDRAAGGFLAIASAEGGMDIEEVAATRPEAVARIPVDPAEGVTSAKASEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L++    +D  L+E+NPL+    GR+  LD K++ DDNA +R     
Sbjct: 163 P----QSVDVLMRLWQVLTREDALLVEVNPLVRTAQGRILALDGKVTLDDNAGFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +    + +D  E  A    L+Y+ L+G +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 D-EGFAHDDPLEAAAAAKGLNYVKLEGEVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK +L+N+FGGI  CD + +GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASARIMADGLSVILSDPAVKSVLVNVFGGITACDAVAEGIVRALDSVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           G N   G  ++       V  A  +D AA++     
Sbjct: 338 GNNAVRGRAILDTRAHPLVHQATTMDGAARRAADLA 373


>gi|221040116|dbj|BAH11821.1| unnamed protein product [Homo sapiens]
          Length = 379

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 135/324 (41%), Positives = 185/324 (57%), Gaps = 3/324 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A+K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAVKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +    D    LY  F   D + +E+NP      G++   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 274

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 275 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 334

Query: 301 GGADQDKVAAAFKIITSDSSVKGI 324
           GG  + +V  AFK++T+D   + +
Sbjct: 335 GGVKEAQVYQAFKLLTADPKQQNL 358


>gi|83699278|dbj|BAE54376.1| succinyl-CoA synthetase beta subunit [Pelotomaculum
           thermopropionicum]
          Length = 369

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 139/395 (35%), Positives = 206/395 (52%), Gaps = 30/395 (7%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
            EY  K L  KY +PV KG +  +   A      + GP  VVKSQ+  G RGK       
Sbjct: 2   FEYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIGGPC-VVKSQVLIGKRGKA------ 54

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               GG++  +S +       E+   T+        G  V  V VE+   I +ELY+S+ 
Sbjct: 55  ----GGIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYMSIT 103

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE--LQG 181
           VD  + M   IAS  GGMDIEE  ++Y   I K  IDP +G+ +     +   +   L  
Sbjct: 104 VDGAAKMPVLIASAYGGMDIEEQPEEY---IIKKHIDPEMGMQAFIARDVVRQMGISLNS 160

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
                   +   LYK F ++D  L+EINPL+   + ++   D+K++ DD+AL+RH D+  
Sbjct: 161 AHGKQLVSIIQTLYKIFKEQDAELVEINPLVFSDD-KVIAADAKVTIDDDALFRHKDLPY 219

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
           + D +  +     AK   LSY+ LDG+I  M NGAG+ M T+D ++ YGG PANFLD GG
Sbjct: 220 VEDRTATEK---AAKDLGLSYVELDGDIAVMANGAGITMTTLDTLQYYGGRPANFLDCGG 276

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           G  ++  A A +++ +  + K I +NIFGGI RCD +   I    K+  I +P+V+RL G
Sbjct: 277 GTGREVTAKALELLLT-KNPKVIFVNIFGGITRCDDVANAIADVKKDKGIPMPIVVRLVG 335

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            N DIG  ++   G+ +     +++AAQK +   K
Sbjct: 336 TNQDIGREILK--GVGIEAFDFMNEAAQKAIELTK 368


>gi|23308950|ref|NP_601764.2| succinyl-CoA synthetase subunit beta [Corynebacterium glutamicum
           ATCC 13032]
 gi|24212428|sp|Q8NMK7|SUCC_CORGL RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|21325338|dbj|BAB99959.1| Succinyl-CoA synthetase beta subunit [Corynebacterium glutamicum
           ATCC 13032]
          Length = 398

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 142/391 (36%), Positives = 225/391 (57%), Gaps = 26/391 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   + VPV KG+V S+  AA  A + + G L VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGG-LTVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  +          ILG  +        G  VN V V  GADI  E Y 
Sbjct: 57  -------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +AK+ P+ + K+ +DPL G+  +    +      +
Sbjct: 103 SILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   +++ + +++ +L+E+NPL++  +G +  LD KI+ DDNA +RH +  
Sbjct: 163 TEVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFRHDNRG 222

Query: 241 ELRDVS-EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
            L + +   D  E++AK+++L+Y+ LDG++G + NGAGL M+T+DI+   G       PA
Sbjct: 223 ALAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNGAGLVMSTLDIVAAAGERHGGQRPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   +I  DS V+ + +N+FGGI  CDV+ KGI+ A+  +  +  
Sbjct: 283 NFLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFGGITACDVVAKGIVGALDVLGDQAT 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAID 383
            PLV+RL+G NV  G R++AE    ++T ++
Sbjct: 343 KPLVVRLDGNNVVEGRRILAEYNHPLVTVVE 373


>gi|311744694|ref|ZP_07718491.1| succinyl-CoA ligase subunit beta [Aeromicrobium marinum DSM 15272]
 gi|311312003|gb|EFQ81923.1| succinyl-CoA ligase subunit beta [Aeromicrobium marinum DSM 15272]
          Length = 389

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 134/405 (33%), Positives = 197/405 (48%), Gaps = 27/405 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VPV  G+V ++   A++A + L   +             K + K
Sbjct: 1   MDLMEYQAKELFAKHGVPVTTGIVATTPDEAKAAAEQLGVVV------------VKAQVK 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G  VN V +   A I  E Y 
Sbjct: 49  AGGRGKAGGVKLAKTPDEAHQHASNILGMQI-------KGLTVNRVLIAPAATIEEEYYF 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS +GG++IEEVAK  P  + ++ ID   GV       +       
Sbjct: 102 SFLLDRANRSYLCIASVEGGVEIEEVAKTNPDAVKQIPIDAGAGVDDAKAREIVAEAGFP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        L+K F ++D +L+E+NPL  ++   L  LD K+S D+NA +RH D  
Sbjct: 162 EALTEQAVTTVLTLWKTFVEEDATLVEVNPLARLEGDVLEALDGKVSLDENAEFRHDDHA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D +  D  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 222 GFEDKAAADPLEAKAKAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 281

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI  A++ +      
Sbjct: 282 FLDIGGGASAQVMADGLDVILGDDQVKSVFVNVFGGITSCDAVANGIKGALELLGDNATK 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAVKG 397
           PLV+RL+G NVD G  ++ E    ++T    +D AA K      G
Sbjct: 342 PLVVRLDGNNVDEGRAILDELNHPLVTQVETMDGAADKAAELANG 386


>gi|317122103|ref|YP_004102106.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Thermaerobacter
           marianensis DSM 12885]
 gi|315592083|gb|ADU51379.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 373

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 140/396 (35%), Positives = 207/396 (52%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK + R+  +P  +G V +S   A      +  P+ + KSQ+ AGGRGK    
Sbjct: 1   MKFFEYMAKEVFRERGIPTPRGRVAASPGEAAQVAAEIGAPVAI-KSQVLAGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +          +LG  +        G RV  V VE+   I RELYL
Sbjct: 57  -------GGIRFADTPDQAREVAAGLLGQEV-------RGYRVERVLVEEKLQIDRELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + VD        IAS  GG++IEEV +     I K  +D  +G+       +   L L+
Sbjct: 103 GIAVDTARKSPLVIASVHGGVNIEEVPEKD---IVKRPVDITLGLYPYFARGIARRLGLE 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   LY+ F D D  L+EINPL+I  + RL   D +++ DD+A +RH D+ 
Sbjct: 160 GAIARQFADILTRLYRIFRDYDAELVEINPLVISGD-RLIAADGRLNIDDDARFRHQDLP 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E+ + +E + R    ++  LSY+ LDG+I  M NGAG+ MAT+D++  YGG   NFLD G
Sbjct: 219 EVSEATELERRV---REIGLSYVELDGDIAVMANGAGITMATIDVLAEYGGRAMNFLDAG 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +A A  ++ S ++ K I +NIFGGI RCD +   I++  ++  I +PLV+RL 
Sbjct: 276 GGAAVEPMAKAMAVLVS-TNPKAIFVNIFGGITRCDDVANAIVTVKQQQGIPVPLVVRLV 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N D G  ++ E G  +    D+ +AA+K V   +
Sbjct: 335 GTNEDKGVAILREHG--IEAFRDMGEAARKAVELAR 368


>gi|325960124|ref|YP_004291590.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Methanobacterium
           sp. AL-21]
 gi|325331556|gb|ADZ10618.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Methanobacterium
           sp. AL-21]
          Length = 368

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 136/394 (34%), Positives = 212/394 (53%), Gaps = 31/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEY AK + +   +PV    ++ +   A  A   +  P+ + KSQI  GGRGK    
Sbjct: 1   MKIHEYIAKEIFKAEGIPVPASQMVKNSEDAHKAALEINKPVAI-KSQILVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  +          +ILGST+        G  V  V VE+   I  E Y+
Sbjct: 57  -------GGIQFATDPDEARDVSSKILGSTV-------KGELVEMVLVEEKLSIESEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR++     +AS+ GGM+IEEVA + P+KI K  I+ L          +   + + 
Sbjct: 103 SVVLDRSAKKPLIMASSSGGMEIEEVATETPEKIVKYYINSLDEFLPYQGREIAIKMGIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   L + F   D ++ EINPL++ K G +   D+K+  DD+ALYR   + 
Sbjct: 163 NELISKVGGIIWKLVQIFDKYDATIAEINPLVLTKEG-IIAADAKLDIDDDALYRQKKLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL ++          K    +Y+ LDGNI  + NGAGL ++ MD++KLYGG PA FLD+G
Sbjct: 222 ELENI----------KSGEFAYVKLDGNIAVIGNGAGLTLSGMDMLKLYGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+ ++ +A A  I+ SD  VK + +N+ GGI R D + +G+L  +KE +  IPLV+RL 
Sbjct: 272 GGSSRENIAKALNIVISDPDVKTVFLNVLGGITRADDVARGVLDVMKESERKIPLVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N + G +++ ++G++  T   ++ AAQK V  
Sbjct: 332 GTNEEEGQKILKDAGVSFET--SMEAAAQKAVEL 363


>gi|148273732|ref|YP_001223293.1| succinyl-CoA synthetase subunit beta [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|189029902|sp|A5CU44|SUCC_CLAM3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|147831662|emb|CAN02631.1| succinyl-CoA synthetase beta chain [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 387

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 136/393 (34%), Positives = 213/393 (54%), Gaps = 25/393 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   Y VPV  G+V  +     +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFESYGVPVLPGIVADTAEEVRAAAEKLGGTV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S  +       ILG  +        G  V+ V V  GA I +E Y 
Sbjct: 57  -------GGVKVAQSADAAFEAAEGILGLDI-------KGHTVHRVMVAAGARIAQEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR       +AS +GGM+IEE+A   P+ + ++ IDP+ G+ +     +       
Sbjct: 103 SILLDRAERSYLCLASYEGGMEIEELAVTRPEALARIEIDPVAGIDAAKAEEIARAASFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +F  L+  + D+D +L+E+NPL++ ++G +  LD K++ D+NA  RH    
Sbjct: 163 EELIAKVAPVFERLWWVYRDEDATLVEVNPLVLTESGEIIALDGKVTLDENAGLRHEGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  D  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDAAAADPLEAKAKESDLNYVKLDGQVGIIGNGAGLVMSTLDVVSYAGEQHGGVRPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA  + +AA   +I  D  V  + +N+FGGI  CD +  GI+ A+ ++      
Sbjct: 283 FLDIGGGASAEVMAAGLDVILGDEQVTSVFVNVFGGITSCDAVANGIVGALDKLGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           PLV+RL+G NV+ G R++ E    ++T +   D
Sbjct: 343 PLVVRLDGNNVEEGRRILEERAHPLVTVVGTMD 375


>gi|239929389|ref|ZP_04686342.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291437715|ref|ZP_06577105.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291340610|gb|EFE67566.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
          Length = 393

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 139/398 (34%), Positives = 221/398 (55%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREITERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    ++   +ILG  +        G  V+ V + +   +I+ E Y
Sbjct: 57  -------GGVKLAATPDEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGMDIEEVA   P+ + K+ ID + GV       +    + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMDIEEVAATRPEAVAKIAIDAIDGVDKAKAQEIAAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L++ F  +D  L+E+NPL  + +G +  LD K+S DDNA +RH + 
Sbjct: 163 PAEVADQVADVLVKLWEVFVKEDALLVEVNPLAKVASGDVLALDGKVSLDDNAEFRHPEF 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL+D +  +  E  AK+ NL+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELQDKAAANPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEAHKGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +++ PLV+RL+G N ++G +++ ++   ++  +D  D 
Sbjct: 343 EVDKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMDG 380


>gi|304315171|ref|YP_003850318.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588630|gb|ADL59005.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           marburgensis str. Marburg]
          Length = 366

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 129/398 (32%), Positives = 212/398 (53%), Gaps = 32/398 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M  +EY AK L R   +PV +G V  +   A    + +   + + K+Q+  GGRGK    
Sbjct: 1   MKFYEYSAKELFRSEGIPVPEGSVARTPQEASEVAENIDSEVAI-KAQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R     ++      ++L S +        G  V  V VE    I RE Y+
Sbjct: 57  -------GGIRFAK-PETAADVASDLLASRV-------KGEEVKSVLVERKISIDREFYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR + M   +AS++GG+DIEE+A + P KI +  ++PL      +   +   + L+
Sbjct: 102 SVVIDRAARMPLIMASSEGGVDIEELAAESPDKIVRYHVNPLDEFLPYEAREIARKMGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   LY  F   D  L EINPL++  +  +   D+K+  DD+++YRH +  
Sbjct: 162 SELIPKVGAVIWKLYHLFRKYDARLAEINPLVLSGD-DVIAADAKLEVDDDSIYRHREFM 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           EL +   E+           +++ LDG+I  + NGAGL +  MD+IKL GG PA FLD+G
Sbjct: 221 ELDEYEPEE----------FAFVKLDGDIAVIGNGAGLTLTAMDLIKLKGGEPATFLDIG 270

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D +  A  ++ S   VK + +N+ GGI R D + +G+++A+K+ + ++PLV+RL 
Sbjct: 271 GGASEDIIRRAINLVISHPDVKVVFLNVLGGITRADDVARGVVNALKDAERDVPLVIRLT 330

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N + G R++ ++G+   T   L+ AA+K V   K +
Sbjct: 331 GTNEEEGQRILKDAGIPFET--SLERAAEKAVEISKAL 366


>gi|54026965|ref|YP_121207.1| succinyl-CoA synthetase subunit beta [Nocardia farcinica IFM 10152]
 gi|81373212|sp|Q5YPP8|SUCC_NOCFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|54018473|dbj|BAD59843.1| putative succinyl-CoA synthetase beta subunit [Nocardia farcinica
           IFM 10152]
          Length = 388

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/395 (33%), Positives = 219/395 (55%), Gaps = 26/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP ++G V  +   A +    +  P+ ++KSQ+  GGRGK    
Sbjct: 1   MDLFEYQAKELFVKHGVPSSEGRVTDTAEDARAIAAEIGKPV-MIKSQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +   +  + ILG  +        G     + V +  DI  E Y+
Sbjct: 57  -------GGVKYAATPEDAFTHAQNILGLDI-------KGHITKKILVAEAKDIAEEYYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ +D + GV      S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+      +  LD K++ D+NA +RH +  
Sbjct: 163 AEVLDAAAVTIQKLWEVFVAEDATLVEVNPLVRTPQDEILALDGKVTLDENAGFRHPEHD 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E  DV   D  E++AK+++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFADVDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A++ +  + N 
Sbjct: 283 FLDIGGGASAEVMAAGLDVILNDAQVKSVFVNVFGGITACDAVANGIVKALEILGDEANK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDA 387
           PLV+RL+G  VD G +++ E+   ++T A  +D+ 
Sbjct: 343 PLVVRLDGNKVDEGRKILVEAAHPLVTLAQTMDEG 377


>gi|302555347|ref|ZP_07307689.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472965|gb|EFL36058.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
          Length = 376

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 132/387 (34%), Positives = 204/387 (52%), Gaps = 23/387 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFEEHGILVPRAEVTDSPKEARGIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVRIAADPAAAELTARQILGMDI-------KGHTVGKVMLAQPVDIEAEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS +GGM+IEEVA   P+ + ++ +DP  GVTS     + +   L 
Sbjct: 103 SYVLDRAAGRFLAIASAEGGMEIEEVAASRPEAVARVPVDPAQGVTSAKAGEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L++    +D  L+E+NPL+    G+L  LD K++ DDNA +R +   
Sbjct: 163 P----QSVDVLVRLWEILVREDALLVEVNPLVRTGQGQLLALDGKVTLDDNARFRQVRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D   +D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 A-EDTGHDDPLEAAAAAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK + +N+FGGI  CD +  GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASARIMADGLSVILSDPAVKSVFVNVFGGITACDAVADGIVQALDTVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDA 387
           G N   G  ++ E    ++  +   D 
Sbjct: 338 GNNAPRGRAILDEHAHPLVEQVTTMDG 364


>gi|84490169|ref|YP_448401.1| hypothetical protein Msp_1386 [Methanosphaera stadtmanae DSM 3091]
 gi|84373488|gb|ABC57758.1| SucC [Methanosphaera stadtmanae DSM 3091]
          Length = 371

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 133/398 (33%), Positives = 212/398 (53%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEY AK + R  N+ + +  + SS   A    K +  P+ V KSQ+ +GGRGK    
Sbjct: 1   MNIHEYVAKKIFRVSNIKIPESYLASSPEEAAEKTKLIGKPVAV-KSQVLSGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELY 119
                  GG+    + +      +E+   T+          +V  V +E+  +    E Y
Sbjct: 57  -------GGILFADTPEEAAQRTKELFTKTI-------KDEKVTQVLIEEKVENKISEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+++DR +     +AS  GGMDIE+VAK+ P+KI K  ++PL         ++   + +
Sbjct: 103 LSIILDRDAKKPLIMASMAGGMDIEQVAKESPEKIVKQYVEPLEEFMPYQARNIAFKMGV 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                   G+    LY+AF D D ++ EINPLI   +G     D+K++ DD+A +RH  +
Sbjct: 163 DTNEVSAVGNFIWKLYQAFNDYDATVAEINPLIKTPDG-FIAADAKMAIDDDAFFRHKKL 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           ++  D+  ED  +      +L+YI LDGNI  + NGAGL +  MD+I+ YG  PA FLDV
Sbjct: 222 KQF-DLEHEDDSD------DLAYIKLDGNIAVIGNGAGLTLTGMDLIQYYGEKPATFLDV 274

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA ++ +  A +++  +  VK I +N+ GGI R D +   +++  KE + +IP+V+RL
Sbjct: 275 GGGASEEVITRALRLVLKNPKVKVIFLNVLGGITRADDVANAVVNVTKEHESDIPVVIRL 334

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            G N + G +++ E  +   T   ++ AAQ  V  + G
Sbjct: 335 TGTNEEEGQKILTEHNIPFET--SMERAAQIAVAKLHG 370


>gi|303244550|ref|ZP_07330884.1| succinyl-CoA synthetase, beta subunit [Methanothermococcus
           okinawensis IH1]
 gi|302485098|gb|EFL48028.1| succinyl-CoA synthetase, beta subunit [Methanothermococcus
           okinawensis IH1]
          Length = 361

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 135/395 (34%), Positives = 217/395 (54%), Gaps = 36/395 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV +G + S+       I+ L  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKKYKIPVPEGFITSN------EIEKLNKPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    ++      I+E+L   +        G +V  V VE+   I +E YL
Sbjct: 51  -------GGVLFADTVNEANEKIKELLNKDI-------KGEKVEKVLVEEKLPIKKEYYL 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR       + ST+GG++IEE+AK  P+KI K  ++PL         ++    ++ 
Sbjct: 97  GITIDRAERKPVIMFSTEGGVEIEEIAKTNPEKIIKYHVNPLNEFLPYIARNILKDADIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LY  F D D  L+EINPL+I ++GR    D+ ++ DD+A YRH D  
Sbjct: 157 SSEISKVADIVYKLYNVFKDMDGMLVEINPLVITEDGRALAADAVLNVDDDAYYRH-DYT 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  + +++D       +   +Y+ LDG+IG + NGAGL +A+MD+IK YGG PA FLD+G
Sbjct: 216 QFEEFNKKD-------KLEFAYVELDGDIGVIGNGAGLTLASMDMIKEYGGNPACFLDIG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  A + +     VKGI IN+  GI RCD + +GI+  +K+   N+   +R+ 
Sbjct: 269 GGANEETVKKALEKVLK-KDVKGIFINVLAGITRCDEVARGIVEVLKK-HPNVKFAVRMM 326

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G R++ E+G+       ++ AA+K++  V
Sbjct: 327 GTNEEEGRRILTENGIPFEY--SMEKAAKKLMEMV 359


>gi|302524119|ref|ZP_07276461.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. AA4]
 gi|302433014|gb|EFL04830.1| succinyl-CoA synthetase subunit beta [Streptomyces sp. AA4]
          Length = 398

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 130/392 (33%), Positives = 215/392 (54%), Gaps = 25/392 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +++EYQA+ L   + VPV  G V S+   A++A + +   + V  +Q+  GGRGK     
Sbjct: 11  DLYEYQARDLFAAHGVPVLPGAVASTPEEAKAAAEQIGTQVVVK-AQVKVGGRGKA---- 65

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++  +          ILG  +        G   + V V + +DI  E Y S
Sbjct: 66  ------GGVKLAQTPDEAKEKAEAILGLDI-------KGHITHRVLVAEASDIASEYYFS 112

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            L+DR +     +AS++GGM+IE++A + P  + K+ +D + GV       +        
Sbjct: 113 FLLDRANRTFLAMASSEGGMEIEQLAVERPDALAKIPVDAIKGVDKATALEILKAGHFPA 172

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +   +  D+   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +RH   +E
Sbjct: 173 EIIDEAADVVVKLWETFVSEDATLVEVNPLVRDPQDKIIALDGKVTLDENAAFRHPAHEE 232

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANF 296
           L D   E+  E +AK  NL+Y+ LDG +G + NGAGL M+T+D++   G       PANF
Sbjct: 233 LVDKQAENPLEAKAKAKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANF 292

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +AA   +I +D+ VK + +N+FGGI  CD +  GI+ A+K +  +   P
Sbjct: 293 LDIGGGASAEVMAAGLDVILNDTDVKSVFVNVFGGITACDAVANGIVEALKILGDEATKP 352

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G NV  G +++A++   ++T +D  D
Sbjct: 353 LVVRLDGNNVVEGRQILADANHPLVTVVDTMD 384


>gi|311896479|dbj|BAJ28887.1| putative succinyl-CoA synthetase beta chain [Kitasatospora setae
           KM-6054]
          Length = 390

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 140/406 (34%), Positives = 218/406 (53%), Gaps = 29/406 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +   A +  +   G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLDGDVIETAADAAAIAERFGG-RAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S  + V++    ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDPQDVVAKAEAILGMDI-------KGHTVHKVMLAQTADIQEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA++ P  + K+ +D   GVT+E  A +    +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGVEIEVVAEENPDALAKIPVDANEGVTAEKAAEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L+  F  +D  L+E+NPLI   +G++  LD K+S D+NA +R  D +
Sbjct: 163 AEIADQVADVLQKLWVVFVKEDALLVEVNPLIKSGDGKIIALDGKVSLDENAEFRQPDHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKGLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGGA  + +A   +II  D+ VK + +N+FGGI  CD +  GI+ A+     K   
Sbjct: 283 FLDIGGGASAEVMANGLEIILGDTDVKSVFVNVFGGITACDAVANGIVQALALLEGKGEA 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAV 395
           +  PLV+RL+G N ++G +++ ++    V     +D AA +     
Sbjct: 343 VTKPLVVRLDGNNAELGRQILTDANHPLVEQVDTMDGAADRAAELA 388


>gi|302553654|ref|ZP_07305996.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471272|gb|EFL34365.1| succinyl-CoA synthetase subunit beta [Streptomyces
           viridochromogenes DSM 40736]
          Length = 393

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 137/398 (34%), Positives = 214/398 (53%), Gaps = 29/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K++VPV  G VI +  AA +A + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGG-KSVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELY 119
                  GGV++ ++    +     ILG  +        G  V+ V + +   +IL E Y
Sbjct: 57  -------GGVKLAATTDEAVEHATNILGMDI-------KGHTVHKVMIAETAPEILEEYY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S L+DR +     IAS +GGM+IEEVA   P+ + K+ ID + GV       +    + 
Sbjct: 103 VSFLLDRANRTFLSIASVEGGMEIEEVAATRPEAVAKIAIDAIDGVDKAKAQEIVAAAKF 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L+  F   D  L+E+NPL  + +G +  LD K+S D+NA +RH + 
Sbjct: 163 PAEVADKVADVLIKLWDTFVKSDALLVEVNPLAKVASGDVIALDGKVSLDENAEFRHPEY 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D    +  E  AK   L+Y+ L+G +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELHDKEAANPLEAAAKAKGLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGEAHKNVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEV 349
           NFLD+GGGA  + +A   +II  D  VK + +N+FGGI  CD +  GI+ A+     K  
Sbjct: 283 NFLDIGGGASAEVMANGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLESKGE 342

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           ++  PLV+RL+G N ++G +++ +    ++  +D  D 
Sbjct: 343 EVTKPLVVRLDGNNAELGRQILDDRNHPLVQRVDTMDG 380


>gi|282908538|ref|ZP_06316368.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282327600|gb|EFB57883.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
           aureus WW2703/97]
          Length = 287

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 146/281 (51%), Positives = 199/281 (70%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           +  Y+  ++DR +  V  +AS +GG +IEEVA   P+KIFK  IDP+IG++      +  
Sbjct: 5   KRYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAF 64

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            + +  ++          LY  F +KD S++EINPL+   +G +  LD+KI+FDDNAL+R
Sbjct: 65  NINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFR 124

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
           H D+ ELRD+ EED +EIEA +H+LSYIALDG+IGCMVNGAGLAMATMD I  +GG PAN
Sbjct: 125 HKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPAN 184

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GG A ++KV  AFKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PL
Sbjct: 185 FLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPL 244

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+RLEG NV++G +++ +SGL +  A  + + AQKIV  VK
Sbjct: 245 VVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIVKLVK 285


>gi|159041785|ref|YP_001541037.1| succinyl-CoA synthetase, beta subunit [Caldivirga maquilingensis
           IC-167]
 gi|157920620|gb|ABW02047.1| succinyl-CoA synthetase, beta subunit [Caldivirga maquilingensis
           IC-167]
          Length = 377

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 144/397 (36%), Positives = 222/397 (55%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+ K +L KY V V KGVVISSV   +     L  P++V KSQ+   GR K    
Sbjct: 1   MRLLEYKGKEILAKYGVSVPKGVVISSVSDIDK--SNLKYPVFV-KSQVPFAGRAKMGL- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                    V+  ++         E LG  +   +       V  V +E+G D+++E Y+
Sbjct: 57  ---------VKRANNKDEAKQIASEYLGKVIQDFE-------VKKVLLEEGVDVVKEYYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR+S     +AS +GG+DIEE+A+  P+KI++  I P  G+    V ++   +   
Sbjct: 101 SVTIDRSSRTFIILASPEGGVDIEEIARTSPEKIYRGRIHPFEGLRDYTVNAINKFMGFT 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       L   +Y  F   D  L+EINPL + ++G    LD KI  DDNALYRH DI 
Sbjct: 161 GELASKFASLLRIMYNVFETYDAELVEINPLALTRDGNFVALDVKIMIDDNALYRHGDI- 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + +  +    E+EA+++   Y+ L G +G + NGAGL MATMD++K + G PA+FLDVG
Sbjct: 220 SVEEEGDLTREELEARKYGFHYVELPGYVGVVGNGAGLTMATMDLVKEFKGEPADFLDVG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V AA  ++  D  +KGI++NIFGGI R D +  G++ A KE+  + PL +RL+
Sbjct: 280 GGASRDIVKAALSLLLKDERIKGIVLNIFGGITRGDEVAYGVVEAFKEIGASKPLAIRLK 339

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N + G R++A  G+ +      ++A  +++  ++G
Sbjct: 340 GTNEEEGRRILAPLGVKIY--ETAEEAIGELMSKLQG 374


>gi|225175980|ref|ZP_03729972.1| succinyl-CoA synthetase, beta subunit [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168568|gb|EEG77370.1| succinyl-CoA synthetase, beta subunit [Dethiobacter alkaliphilus
           AHT 1]
          Length = 369

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 136/397 (34%), Positives = 205/397 (51%), Gaps = 29/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY  K    KY +PV +G V S+   A +  + +     VVKSQ+ +G RGK    
Sbjct: 1   MKLYEYMGKEQFAKYGIPVPEGGVASTPEEAAALTEKIGS--VVVKSQVLSGKRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+              ++LGS L        G  V+ V VE    I +E YL
Sbjct: 56  -------GGIGFTDDPAEAREFSAKLLGSEL-------CGFTVDKVLVEQKLQIDKEFYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ VD  +     +AS QGGMDIEEV +   + + +  +D  IG+       +   L + 
Sbjct: 102 AITVDGAARKPIILASAQGGMDIEEVPE---EHMVRQTLDVTIGMQPYMTRDITRRLGVT 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LYK + + D  L EINPL+I     +   D+K++ DD++L+RH D+ 
Sbjct: 159 GGIAKQIQGILLKLYKLYVELDAELAEINPLVISGE-NVIAADAKVTIDDDSLFRHKDLP 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + + ++ + +   A    LSY+ L+GNI  M NGAG+ MAT+D+I+ YGG+ ANFLD G
Sbjct: 218 VVEERTDAEKK---AHALGLSYVELEGNIAVMANGAGITMATLDLIQYYGGSAANFLDAG 274

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++ + A +++ S  + K ILINIFGGI RCD +        K + I +P+V+RL 
Sbjct: 275 GGAGIEQTSKALELLLS-KNPKAILINIFGGITRCDDVANAFAYVKKNIGIPVPVVIRLV 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D G  ++ E G  +     + +AA K V   KG
Sbjct: 334 GTNEDEGRAILKEVG--IEAYQFMHEAASKAVEIAKG 368


>gi|146323555|ref|XP_746427.2| succinyl-CoA synthetase beta subunit [Aspergillus fumigatus Af293]
 gi|129555252|gb|EAL84389.2| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus Af293]
          Length = 407

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 135/376 (35%), Positives = 215/376 (57%), Gaps = 9/376 (2%)

Query: 18  PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLK 77
            V +G V+++   AE+ + ++  P  V+KSQI AGGRGKG   ++ +D KGG+R+ ++ +
Sbjct: 35  AVPRGYVVTNPGDAEAVVSSIGAPS-VLKSQILAGGRGKG---KMSSDGKGGIRIVATPE 90

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
               +   +LG  L T+QT P G  V  +Y+    D+ +E YL+L  DR       + S 
Sbjct: 91  QAFQNASRMLGHYLATQQTPPHGLLVKKLYIYKAVDVEQEFYLALTFDRERYSPVILISD 150

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA 197
           QGG++IE        K+ +   +   G+T E +A +        +       +   + K 
Sbjct: 151 QGGVNIES----NQDKLHRFWFNLSRGITGETMAGIQKQSCFTDKEMPTIESIIRQMIKL 206

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQ 257
           F ++D  LLE+NPL+    G    LD+K  FD+ A +R  ++    +       E EA+ 
Sbjct: 207 FEERDAILLELNPLVRTPEGSFVCLDAKFEFDNAAQFRQPEVFSKEERMPGFEDEYEAQM 266

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITS 317
           H L YI L+G+IG +VNGAGLAMAT D+I L+GG  ANFLD+GG A  + +  AF+I++ 
Sbjct: 267 HGLVYIRLNGHIGNIVNGAGLAMATNDLINLHGGKCANFLDIGGKATTETLLKAFEILSR 326

Query: 318 DSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLIAESGL 376
           D  V+GI +NIFGGI+RCD++ + I+ A   +    +P+V+RL+G N D   + ++ S L
Sbjct: 327 DQQVRGIFVNIFGGIVRCDMIAESIIQAAHTLGGFRVPVVVRLQGTNCDAAMKRLSTSEL 386

Query: 377 NVITAIDLDDAAQKIV 392
           ++ T  DL+ AA++I+
Sbjct: 387 DISTETDLEKAAKRII 402


>gi|308176362|ref|YP_003915768.1| succinyl-CoA synthetase beta subunit [Arthrobacter arilaitensis
           Re117]
 gi|307743825|emb|CBT74797.1| succinyl-CoA synthetase beta subunit [Arthrobacter arilaitensis
           Re117]
          Length = 390

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 133/404 (32%), Positives = 211/404 (52%), Gaps = 27/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ L   + VPV  G+V  +   A++A + + G +             K + K
Sbjct: 1   MDLYEYQARDLFEAHGVPVLAGIVAYTPEEAKAAAEKIGGVVV-----------VKAQVK 49

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +          ILG  +        G  VN V +  GADI  E Y 
Sbjct: 50  VGGRGKAGGVKVAKTADEAFEHASNILGMDI-------KGHTVNKVMIAQGADIAEEFYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGM+IE +A + P  + K+ +DP++G+ +   A + +     
Sbjct: 103 SVLLDRANRNYLAMCSVEGGMEIEVLAVERPDALAKVAVDPIVGIDAAKAAEIVEAANFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRHLDI 239
            + R    +    L+  F ++D +L+E+NPL+    G +  LD K+S DDNA   RH   
Sbjct: 163 EELRAKVAETIQKLWVVFKEEDATLVEVNPLVKTGAGDIVALDGKVSLDDNASEVRHPAH 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           +EL D    D  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 EELEDKGAADPLEAKAKAAGLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGSVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--IN 352
           NFLD+GGGA  + +A    +I +D  VK + +N+FGGI  CD +  GI+ A+  +    N
Sbjct: 283 NFLDIGGGASAEVMANGLDVILNDPQVKSVFVNVFGGITACDAVANGIVGALNTLGDAAN 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G NV+ G  ++A++   ++T A  +D+ A K     
Sbjct: 343 KPLVVRLDGNNVEEGRAILAQANHPLVTLAATMDEGADKAAELA 386


>gi|296393907|ref|YP_003658791.1| succinyl-CoA synthetase subunit beta [Segniliparus rotundus DSM
           44985]
 gi|296181054|gb|ADG97960.1| succinyl-CoA synthetase, beta subunit [Segniliparus rotundus DSM
           44985]
          Length = 388

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 132/394 (33%), Positives = 205/394 (52%), Gaps = 26/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ VP   G V  +   A    + +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELYLKHGVPTTPGSVTDTPEGAREIAERIGKPVMV-KAQVQVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + I+G  +        G  V  + + + ADI  E Y 
Sbjct: 57  -------GGVKYAATPQEAYEHAKNIIGLDI-------KGHVVKRLLIAEAADIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR+ G    I S+ GGM+IEEVA   P+K+ K+ ID   GV       L     L 
Sbjct: 103 SFLLDRSVGGFIAIVSSAGGMEIEEVAHTTPEKVAKVPIDYNAGVDVAKGRELAAAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        L++ F  +D +L+E+NPL    + ++  LD K++ D NA +RH    
Sbjct: 163 EAILDKAAVTIAKLWEVFVKEDATLVEVNPLARTPDDQILALDGKVTLDGNAEFRHPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           E   + E+D  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 EFAALVEQDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGEGHNGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA    +AA   +I  D  V  + +N+FGGI  CD +  GI+ A+  +      
Sbjct: 283 FLDIGGGASASVMAAGLDVILGDQQVTSVFVNVFGGITACDAVANGIVGALDTLGDAATK 342

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDD 386
           P+V+RL+G NV++G +++AE    ++T    +D+
Sbjct: 343 PIVVRLDGNNVELGRQILAERAHPLVTEVATMDE 376


>gi|71033113|ref|XP_766198.1| ATP-specific succinyl-CoA synthetase beta subunit [Theileria parva
           strain Muguga]
 gi|68353155|gb|EAN33915.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
           [Theileria parva]
          Length = 453

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 142/430 (33%), Positives = 210/430 (48%), Gaps = 44/430 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           +N+ EY    +L++  V V +    ++   A  A K++      P  VVK+ +  GGRGK
Sbjct: 30  LNVSEYIGMTILKRNGVRVPEFRNATTPEEAFEAGKSIQQLTNTPELVVKALVLTGGRGK 89

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G F         GV +  S   V +  R +LG+ L TKQT   G     V V     I  
Sbjct: 90  GTFNTGFK----GVEIVKSPSEVSACARGMLGNYLTTKQTVGKGLLCTEVLVAQKLSIKS 145

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E YLS  +DR SG +  IA+  GG ++EE+A  +P  +  L I PL G+T E    L   
Sbjct: 146 ERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHQHPDAVLTLQISPLTGLTPELTELLVKQ 205

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG------------------- 217
           L    +           LY  F   D +LLE+NPL+   +                    
Sbjct: 206 LSFSNEVTEQVKKTVQQLYDTFVKSDGTLLEVNPLVETHSDVKSSPTQSVESSANSSVES 265

Query: 218 --------RLRVLDSKISFDDNALYRHLDIQEL----RDVSEEDSREIEAKQHNLSYIAL 265
                    +   D+K+  DDNA YR  ++ ++    R   EE     EA +  L+YI+L
Sbjct: 266 SVKSSVKSNVMACDAKLIVDDNAKYRQSELFDMTPVIRTKEEE-----EADRAGLNYISL 320

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGN+ C+VNGAGLAMATMD+I+ +GG  ANFLDVGG +  + ++ A +I+ SD   K +L
Sbjct: 321 DGNVACIVNGAGLAMATMDLIQHHGGKAANFLDVGGNSTPETLSKALEIVNSDLRAKVLL 380

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NI GGI+RCD   +  + A K++   +P+V+RL+G   +   +L+ ES +  +   D D
Sbjct: 381 VNIVGGIVRCDKFAESFVEASKKLSRQLPVVIRLQGTRAESAKKLLNESNIPHLFCTDFD 440

Query: 386 DAAQKIVHAV 395
              +  V   
Sbjct: 441 SVCKSAVEIA 450


>gi|51893671|ref|YP_076362.1| succinyl-CoA synthetase beta subunit [Symbiobacterium thermophilum
           IAM 14863]
 gi|51857360|dbj|BAD41518.1| succinyl-CoA synthetase beta subunit [Symbiobacterium thermophilum
           IAM 14863]
          Length = 373

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 198/385 (51%), Gaps = 29/385 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY AK +  ++ VP   G++ ++   AE A + +      +K+Q+  GGRGK    
Sbjct: 1   MKLYEYLAKQMFAEHGVPTGNGILCTTPEEAEEAARKIG--PCAIKAQVLVGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ ++ +      REILG  L        G  V+ V V+    I +E Y+
Sbjct: 56  -------GGIKLANTPEEARERAREILGMNL-------KGYIVDKVLVDPQIKIEKEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D  +     +AS  GG++IE V      KI    ID   G+       +   + L 
Sbjct: 102 SITLDGMAKKPLVMASEYGGVEIESVPH---DKIVFEHIDIETGLLPFQAREIARKINLT 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI 239
           G        +   LY+AF   D  L+EINPL +   G RL   D + + +D+AL+RH + 
Sbjct: 159 GDLADQFVRILTGLYQAFRKYDAELVEINPLALTDGGTRLIAADGRFNVEDDALFRHPEF 218

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
             + + +E + +    +   L+++ LDG+I  M NGAG+AM T+D +  YGG PANFLD 
Sbjct: 219 PRVEEGTELEKKV---RAIGLAFVQLDGDIAVMANGAGMAMGTLDTLAYYGGRPANFLDA 275

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGG+  +  A AF  +   +  K I +NIFGGI RCD++ + I+   K   I++PLV+R+
Sbjct: 276 GGGSGVEPTAQAFDALLG-TKPKAIFVNIFGGITRCDLVAEAIVQVKKAKGIDVPLVVRM 334

Query: 360 EGANVDIGNRLIAESGLNVITAIDL 384
            G N   G  ++AE+G  +    D+
Sbjct: 335 VGTNDVRGREILAEAG--IQAYTDM 357


>gi|15668382|ref|NP_247178.1| succinyl-CoA synthetase subunit beta [Methanocaldococcus jannaschii
           DSM 2661]
 gi|2500927|sp|Q57663|SUCC_METJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|1590950|gb|AAB98195.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 364

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/393 (33%), Positives = 206/393 (52%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV +  ++S      S          V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKNIFKKYGIPVPESFLVSKEDDLNSINVD---KEVVLKAQVLVGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   S+ +  I    E+    +        G +V  + VE+   I +E Y+
Sbjct: 55  -------GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     I ST+GG+DIEEVA+  P+KI K  ID            +    +L 
Sbjct: 101 SIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKEAKLP 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LYK F + D +++EINPL+I K+G +   D+ +  DD+A +RH    
Sbjct: 161 SNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFRH---- 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 EE       ++   +Y+ LDG++  + NGAGL +A+MDII   G  PA FLD+G
Sbjct: 217 ----NYEEFEEYKNKEKLPFAYVELDGDVAVIGNGAGLTLASMDIINNLGRKPACFLDIG 272

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD + V  A + +  + +VKGI INI GGI RCD + KGI+  +KE   N+   +R+ 
Sbjct: 273 GGADAETVKLALRKVLENKNVKGIFINILGGITRCDEVAKGIVEVLKE-HPNVKFAVRMM 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N +IG +++ E G+   T   +++A +K++ 
Sbjct: 332 GTNEEIGRKILEEHGIPYET--SMEEAGRKLIE 362


>gi|119717812|ref|YP_924777.1| succinyl-CoA synthetase subunit beta [Nocardioides sp. JS614]
 gi|189081760|sp|A1SMQ5|SUCC_NOCSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|119538473|gb|ABL83090.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nocardioides
           sp. JS614]
          Length = 386

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 135/403 (33%), Positives = 203/403 (50%), Gaps = 27/403 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K++VPV  G+V  +   A++A + L   +             K + K
Sbjct: 1   MDLMEYQAKELFAKHDVPVTLGIVAHTPDEAQAAAEQLGVVV------------VKAQVK 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  + +   +    ILG  +        G RVN V +   A I  E Y 
Sbjct: 49  AGGRGKAGGVKLAKTPEEARTHAEAILGMEI-------KGLRVNRVLIAPAASIEEEYYF 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     IAS +GG++IEEVAK  P  + ++ IDP  GV       +    +  
Sbjct: 102 SFLLDRANRRYLCIASVEGGVEIEEVAKTNPDAVRQIPIDPGAGVDEAKAREIVADAKFP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                        L+K F ++D +L+E+NPL  +   +L  LD K+S D+NA +RH +  
Sbjct: 162 EALTEQAVQTVLALWKVFVEEDATLVEVNPLARLAGDKLEALDGKVSLDENAEFRHEEHA 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
                 EED  E  AK   L+Y+ LDG++G + NGAGL M+T+D++   G       PAN
Sbjct: 222 SFVIREEEDPLESAAKDKGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPAN 281

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INI 353
           FLD+GGGA+   +A    +I  D  VK + +N+FGGI  CD +  GI+ A+  +      
Sbjct: 282 FLDIGGGANAQVMADGLHVILGDEQVKAVFVNVFGGITACDEVANGIVGALDILGEDATK 341

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
           PLV+RL+G N D G R++ E+   ++T    +D AA K     
Sbjct: 342 PLVIRLDGNNADEGRRILTEAAHPLVTMVDTMDGAADKAAELA 384


>gi|297563044|ref|YP_003682018.1| succinyl-CoA synthetase subunit beta [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847492|gb|ADH69512.1| succinyl-CoA synthetase, beta subunit [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 395

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 132/402 (32%), Positives = 213/402 (52%), Gaps = 34/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EY+AK L  +Y VP+ +G +  +   A  A   +     VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYEAKQLFGEYGVPLVEGEIADTPEQARLAAGRIG-HRVVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V    +   +   +ILG  +        G  V  V +E+ +DI  E Y 
Sbjct: 57  -------GGVKVAEGPEDAGARAEQILGMDI-------KGHTVRRVLIEEASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     I S +GGMDIEEVA+  P+ + +  + P  GV      ++C    L 
Sbjct: 103 SFLLDRANRTFLSICSAEGGMDIEEVARTRPEAVVRTPVGPG-GVDHGAALAICRAAGLP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + R     +   L++    +D +L+E+NPL+   +GR+  LD K++ D NA +RH +  
Sbjct: 162 EEVRDCAAQVVTRLWQVAVGEDATLVEVNPLVRTADGRIIALDGKVTLDGNAAFRHPERT 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D ++ D RE  A+   L+Y+ LDG +G + NGAGL M+T+D++   GG      PAN
Sbjct: 222 PFADGADTDERERMARARGLNYVRLDGEVGVIGNGAGLVMSTLDVVAHAGGAHGGVRPAN 281

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK----- 350
           FLD+GGGA  + +A   +I+  D SV+ +L+N+FGGI  CD + +GI+ A+  ++     
Sbjct: 282 FLDIGGGASAEVMANGLEIVLGDPSVRSVLVNVFGGITACDAVAEGIVRALDMLEGRSGD 341

Query: 351 -----INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
                +  PLV+RL+G N ++G  ++ +     +  +D  D 
Sbjct: 342 EGFDQLGKPLVVRLDGNNAELGREILTKRAHPAVQQVDTMDG 383


>gi|114587762|ref|XP_001134813.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 313

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 136/301 (45%), Positives = 187/301 (62%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G  L TKQT   G +VN V V +  DI RE YL++L+DR+      + S QGG+DIEE
Sbjct: 1   MIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEE 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA   P+ IFK  ID   G+       + + L   G  +    D    LY  F   D + 
Sbjct: 61  VAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFIGPLKSQAADQITKLYNLFLKIDATQ 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L YI L
Sbjct: 121 VEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V+ IL
Sbjct: 181 DGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +AIDL+
Sbjct: 241 VNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLE 300

Query: 386 D 386
           D
Sbjct: 301 D 301


>gi|62391404|ref|YP_226806.1| succinyl-CoA synthetase subunit beta [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326745|emb|CAF21227.1| SUCCINYL-COA SYNTHETASE BETA SUBUNIT [Corynebacterium glutamicum
           ATCC 13032]
          Length = 402

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 224/390 (57%), Gaps = 26/390 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L   + VPV KG+V S+  AA  A + + G L VVK+Q+  GGRGK     
Sbjct: 6   DLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGG-LTVVKAQVKVGGRGKA---- 60

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGVRV  +          ILG  +        G  VN V V  GADI  E Y S
Sbjct: 61  ------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFS 107

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     + S +GGM+IE +AK+ P+ + K+ +DPL G+  +    +      + 
Sbjct: 108 ILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFET 167

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +       +   +++ + +++ +L+E+NPL++  +G +  LD KI+ DDNA +RH +   
Sbjct: 168 EVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFRHDNRGA 227

Query: 242 LRDVS-EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           L + +   D  E++AK+++L+Y+ LDG++G + NGAGL M+T+DI+   G       PAN
Sbjct: 228 LAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNGAGLVMSTLDIVAAAGERHGGQRPAN 287

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  DS V+ + +N+FGGI  CDV+ KGI+ A+  +  +   
Sbjct: 288 FLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFGGITACDVVAKGIVGALDVLGDQATK 347

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAID 383
           PLV+RL+G NV  G R++AE    ++T ++
Sbjct: 348 PLVVRLDGNNVVEGRRILAEYNHPLVTVVE 377


>gi|302557241|ref|ZP_07309583.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
 gi|302474859|gb|EFL37952.1| succinyl-CoA synthetase, beta subunit [Streptomyces griseoflavus
           Tu4000]
          Length = 376

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 208/386 (53%), Gaps = 23/386 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFAEHGIVVPRAEVTGSSREARDIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVRLAADPAAAELTARQILGMDI-------KGHTVGTVMLAQPVDIAEEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DRT+G    IAS +GGMDIEEVA   P+ + ++ +DP  GVT    A + +   L 
Sbjct: 103 SYVLDRTAGRFLAIASAEGGMDIEEVAATRPEAVARVPVDPAEGVTPATAARIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L++    +D  L+E+NPL+  ++GR+  LD K++ DDNA +R     
Sbjct: 163 ART----VDVLVRLWQVLVREDALLVEVNPLVRTRDGRIMALDGKVTLDDNARFRQERWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + +D +  D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 D-QDDTHTDPLEAAAAAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD SV+ + +N+FGGI  CD +  GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASAQVMADGLSVILSDPSVRSVFVNVFGGITACDAVADGIVRALDTVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  ++      ++  +   D
Sbjct: 338 GNNAARGRAVLDAHAHPLVEQVTTMD 363


>gi|329112627|gb|AEB72017.1| RH70213p [Drosophila melanogaster]
          Length = 312

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 152/312 (48%), Positives = 208/312 (66%), Gaps = 3/312 (0%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G+ LITKQT  +G  VN V V    +I RE YL +L+DR       IAS  GGMDIE 
Sbjct: 1   MIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEA 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA++ P+KI  + +D    +    +  +   LE +G +     +    LY  F   D   
Sbjct: 61  VAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQKLYTLFKAVDAVQ 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE--DSREIEAKQHNLSYI 263
           +EINPL     G +  +D+K++FDDNA +R  DI  + DV+EE  D RE+EA ++NL+Y+
Sbjct: 121 IEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSM-DVTEEESDPREVEAAKYNLNYV 179

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
           A+DGNIGC+VNGAGLAMATMDIIKL GG PANFLDVGGG  +D+VA AF+I+T+D  VKG
Sbjct: 180 AMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKG 239

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+N+FGGI+ C  +  GI++A K++++N+PLV+RLEG NV+    ++  SGL + TA D
Sbjct: 240 ILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASD 299

Query: 384 LDDAAQKIVHAV 395
           LDDAA K V A+
Sbjct: 300 LDDAAHKAVAAL 311


>gi|289580418|ref|YP_003478884.1| succinyl-CoA synthetase subunit beta [Natrialba magadii ATCC 43099]
 gi|289529971|gb|ADD04322.1| succinyl-CoA synthetase, beta subunit [Natrialba magadii ATCC
           43099]
          Length = 385

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 132/401 (32%), Positives = 208/401 (51%), Gaps = 23/401 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEYQAK +     VP     + S V    +A + +  P+ V K+Q+  GGRGK    
Sbjct: 3   MKLHEYQAKQVFADAGVPTPSSQLASDVDGVLTAAEEIGYPVAV-KAQVQVGGRGKA--- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+ +  + +        I+G  L        G  V  V VE   D   ELY+
Sbjct: 59  -------GGIELVENDEEAREAAESIIGMDL-------KGYHVGQVLVEGAVDFTDELYV 104

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR  G    + ST+GG++IEEVA++ P  I +  IDP  G+             + 
Sbjct: 105 GITMDRGEGKPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKAVYDAGVD 164

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   LY  +  +D S  EINPL++  +  +   D+ ++ D++AL+R  ++ 
Sbjct: 165 KSVANDVASVLTTLYDLWESRDGSDAEINPLMVTADDEVIAADAVMNIDEDALFRQPELA 224

Query: 241 ELRDVSEE--DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           E+ + +    D  E +A ++   Y+ L+GN+G + NGAGL M T+D++  YGG PANFLD
Sbjct: 225 EMEEEAASGGDELEQKADEYGFDYVRLEGNVGIIGNGAGLVMTTLDLVDYYGGEPANFLD 284

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVM 357
           VGGGA  +++A A  ++ SD +V  ++ NIFGGI R D + KGI  A+++  +I  P+V+
Sbjct: 285 VGGGAKAERIANALDMVFSDDNVDSVVFNIFGGITRGDEVAKGINEALEQFDEIPKPVVV 344

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           RL G N + G  ++ E  + V     L+DA Q+ V   + V
Sbjct: 345 RLAGTNWEEGMEILNEDLVTVE--QTLEDAVQRTVEYAEEV 383


>gi|289191514|ref|YP_003457455.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus sp.
           FS406-22]
 gi|288937964|gb|ADC68719.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus sp.
           FS406-22]
          Length = 364

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 130/393 (33%), Positives = 207/393 (52%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV    ++S      S    +   + V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKNIFKKYGIPVPNSFLVSKGDDLNSI--EIDREV-VLKAQVLVGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   S+ +  I    E+    +        G +V  + VE+   I +E Y+
Sbjct: 55  -------GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     I ST+GG+DIEEVA+  P+KI K  +D            +    +L 
Sbjct: 101 SIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHVDVKKPFLPYVARWIVKEAKLP 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LYK F + D +++EINPL+I ++G +   D+ +  DD+A +RH    
Sbjct: 161 SNEIGKVADVIYKLYKIFKELDATMVEINPLVITEDGNVYAADAVLHLDDDAAFRH---- 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 EE       ++   +Y+ LDG++  + NGAGL +A+MD+I   G  PA FLD+G
Sbjct: 217 ----NYEEFEEYKNKEKLPFAYVELDGDVAVIGNGAGLTLASMDVINNLGRKPACFLDIG 272

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD + V  A + +  + +VKGI INI GGI RCD + KGI+  +KE   NI   +R+ 
Sbjct: 273 GGADAETVKLALRKVLENKNVKGIFINILGGITRCDEVAKGIVEVLKE-HPNIKFAVRMM 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N DIG +++ E G+   T   +++A +K++ 
Sbjct: 332 GTNEDIGRKILEEHGIPYET--SMEEAGRKLIE 362


>gi|188587004|ref|YP_001918549.1| succinyl-CoA synthetase, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351691|gb|ACB85961.1| succinyl-CoA synthetase, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 375

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 136/395 (34%), Positives = 211/395 (53%), Gaps = 27/395 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY AK L+ +  + V +G    S    E     L  P  V+KSQ+  GGRGK    
Sbjct: 1   MKLYEYMAKKLMNQCGISVPRGEAAFSAQEVEQKFTGLDSP-AVIKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + +      +E+    +        G +V  V VE+  DI  ELYL
Sbjct: 57  -------GGIKFADTPQEARKVSKELFNMQI-------KGEQVTGVLVEEQLDISSELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  +     +ASTQGG+DIEEV+      I K  I+P  GV       + D L L 
Sbjct: 103 SITVDTGTKKPLIMASTQGGVDIEEVSD---DLIVKRHIEPDWGVLPYLCREITDQLNLP 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A      +   LY  F   D  L+EINPL+I ++ R+   D K++ DD+A+YR  ++ 
Sbjct: 160 GEASKQVSAIISKLYDTFKTYDAELVEINPLVITEDNRVIAADGKMTIDDDAMYRQDELP 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
               VSE+ S E + ++  LS++ L+G+I  M NGAG+AMAT+D+I+ YGG  ANFLD G
Sbjct: 220 R---VSEKTSLEQQVEKIGLSFVELEGDIAIMANGAGMAMATVDVIEQYGGKAANFLDAG 276

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +    A +++  ++  + ++INIFGGI RCD +   ++   +++ I +PLV+RL 
Sbjct: 277 GGASVEPTKKALELLL-NTDPRAVIINIFGGITRCDDVANALVQVKQDMGIKVPLVIRLI 335

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G   +   +++ + G  +    D+ +AA+K V   
Sbjct: 336 GTKDEEAVKILGQHG--ISAYQDMGEAAKKAVELA 368


>gi|317145591|ref|XP_001820913.2| succinyl-CoA synthetase beta subunit [Aspergillus oryzae RIB40]
          Length = 372

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 139/359 (38%), Positives = 207/359 (57%), Gaps = 10/359 (2%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           + +PV +G V+ S  AA   +  +   G   V+K+QI AGGRGKG   +  +D KGGVR+
Sbjct: 9   FQIPVPEGFVVKSPEAARDVVYNIATSGAPSVMKAQILAGGRGKG---KYNSDGKGGVRI 65

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
             S      +   ++G +L+TKQT P G  VN +Y+    DI +E Y+++  DR      
Sbjct: 66  VDSPDEAFENASNMIGYSLVTKQTPPDGLPVNKLYIYKSVDIAQEFYVAITFDRARYKPV 125

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            + S  GG++IE        ++ +   +   G+T E  A +                +  
Sbjct: 126 LLMSDDGGVNIES----NVNQLQRFWFNLSTGITPEIAAYIEAQFGFSDDDMGMVTHILR 181

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSRE 252
            L K F +KD +LLE+NP +    G L  +D+K +FDD+A +R  ++  L + S E+  E
Sbjct: 182 QLVKLFREKDATLLELNPFVRTTEGSLICIDAKFNFDDSAKFRQPELVSLVEHSAEEKDE 241

Query: 253 IEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAF 312
            EA Q  LSYI LDGNIG +VNGAGLAMAT D++ LYGG  ANFLD+GGGA ++ ++ AF
Sbjct: 242 YEASQLGLSYIRLDGNIGVIVNGAGLAMATNDLVTLYGGNCANFLDIGGGATKETLSKAF 301

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRL 370
            I+  DS  K + INI+GGI+RCD++ + IL+A   +   +IP+V+RL+G N + G +L
Sbjct: 302 SILQGDSRTKALFINIYGGIVRCDMIAESILAASAAMGGFSIPVVVRLQGTNYEKGFKL 360


>gi|145296561|ref|YP_001139382.1| succinyl-CoA synthetase subunit beta [Corynebacterium glutamicum R]
 gi|140846481|dbj|BAF55480.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 402

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 223/390 (57%), Gaps = 26/390 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L   + VPV KG+V S+  AA  A + + G L VVK+Q+  GGRGK     
Sbjct: 6   DLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGG-LTVVKAQVKVGGRGKA---- 60

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGVRV  +          ILG  +        G  VN V V  GADI  E Y S
Sbjct: 61  ------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFS 107

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR +     + S +GGM+IE +AK+ P+ + K+ +DPL G+  +    +      + 
Sbjct: 108 ILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFET 167

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +       +   +++ + +++ +L+E+NPL++   G +  LD KI+ DDNA +RH +   
Sbjct: 168 EVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTDGGDVIALDGKITLDDNADFRHDNRGA 227

Query: 242 LRDVS-EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
           L + +   D  E++AK+++L+Y+ LDG++G + NGAGL M+T+DI+   G       PAN
Sbjct: 228 LAESAGGLDILELKAKKNDLNYVKLDGSVGIIGNGAGLVMSTLDIVAAAGERHGGQRPAN 287

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +AA   +I  DS V+ + +N+FGGI  CDV+ KGI+ A+  +  +   
Sbjct: 288 FLDIGGGASAESMAAGLDVILGDSQVRSVFVNVFGGITACDVVAKGIVGALDVLGDQATK 347

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAID 383
           PLV+RL+G NV  G R++AE    ++T ++
Sbjct: 348 PLVVRLDGNNVVEGRRILAEYNHPLVTVVE 377


>gi|121727360|ref|ZP_01680499.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V52]
 gi|121630252|gb|EAX62650.1| succinyl-CoA synthase, beta subunit [Vibrio cholerae V52]
          Length = 292

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 151/291 (51%), Positives = 214/291 (73%)

Query: 107 YVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
            VE+ ++I  ELYL  +VDR++  + F+AST+GG++IE+VA++ P+ I K  IDPL+G  
Sbjct: 1   MVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQ 60

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
           +     L   L LQG        +F  L + F   D++LLEINPL+I   G L  LD KI
Sbjct: 61  AYQGRELAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKI 120

Query: 227 SFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII 286
           + D NA+YR   ++++ D S+ED+RE  A +  L+Y+ALDGN+GCMVNGAGLAM TMDI+
Sbjct: 121 NIDSNAMYRQPKLRQMHDASQEDAREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIV 180

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
            L+GG PANFLDVGGGA +++VA AFKII SD++VK +L+NIFGGI+RCD++ +GI+ AV
Sbjct: 181 NLHGGKPANFLDVGGGATKERVAEAFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAV 240

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           KEV +++P+V+RLEG N ++G +++AESGL++I A+ L DAAQK+V A +G
Sbjct: 241 KEVGVSVPVVVRLEGTNAELGRKVLAESGLDIIAAVSLTDAAQKVVAAAEG 291


>gi|284030088|ref|YP_003380019.1| succinyl-CoA synthetase subunit beta [Kribbella flavida DSM 17836]
 gi|283809381|gb|ADB31220.1| succinyl-CoA synthetase, beta subunit [Kribbella flavida DSM 17836]
          Length = 384

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 148/394 (37%), Positives = 217/394 (55%), Gaps = 29/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  ++ VPV  G VI +   A +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLLEYQAKELFARHGVPVTLGRVIENAADAAAAAEALGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +         R+ILG  +        G  V  V +   A I  E YL
Sbjct: 57  -------GGVKLAADPAEATERARDILGMDI-------KGHTVRRVLLAPAAAIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S LVDR +     IAST+GG++IEEVA   P  I K+ IDP +GV     A +     L 
Sbjct: 103 SFLVDRANRDYLCIASTEGGVEIEEVAHSNPDAIAKVSIDPAVGVDDAKAAEIVAAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L+  F  +D SL+E+NPL+ + +G L  LD K++ D+NA YRH D  
Sbjct: 163 AG----AVDVVRRLWAVFVAEDASLVEVNPLVKLADGSLEALDGKVTLDENAAYRHPDHA 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
              D +  D  E  A+   L+Y+ LDG++G + NGAGL M+T+D++   G       PAN
Sbjct: 219 AFEDKAAADPLEAAAQAKGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPAN 278

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINI 353
           FLD+GGGA  + +A    II  D+ VK + +N+FGGI  CD +  GI+ A++++  + N 
Sbjct: 279 FLDIGGGASAEVMANGLGIILGDTQVKSVFVNVFGGITACDAVSNGIVQALEQLGKQANK 338

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           PLV+RL+G NVD G ++++ +   ++T +D  D 
Sbjct: 339 PLVVRLDGNNVDEGRKILSRANHPLVTVVDTMDG 372


>gi|297158168|gb|ADI07880.1| succinyl-CoA synthetase subunit beta [Streptomyces bingchenggensis
           BCW-1]
          Length = 391

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 133/397 (33%), Positives = 212/397 (53%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L  K+ VPV  G VI +  AA    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREVTERLGG-RAVVKAQVKVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S     ++   +ILG  +        G  V+ V +   ADI  E Y+
Sbjct: 57  -------GGVKLASDADDAVAKATQILGMDI-------KGHTVHKVMLAQTADIKEEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DRT+     +AS +GG++IE VA+  P+ + K+ +D + GVT E  A +    +  
Sbjct: 103 SFLLDRTNRTFLAMASVEGGVEIEVVAEQSPEALAKIPVDAIEGVTKEKAAEIVAAAKFP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   L+  F ++D  L+E+NPL+    G++  LD K+S D+NA +R  + +
Sbjct: 163 ADIADQVAEVLQTLWTVFIEEDALLVEVNPLVKTGEGKIIALDGKVSLDENAAFRQPEHE 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APAN 295
            L D +  +  E  AK   L+Y+ L+G +G + NGAGL M+T+D++   G       PAN
Sbjct: 223 ALEDKAAANPLEAAAKAKGLNYVKLEGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPAN 282

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-----KEVK 350
           FLD+GGG          +II  D  VK + +N+FGGI  CD +  GI+ A+     K  +
Sbjct: 283 FLDIGGGGPPRGGGNGLEIILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGEE 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  PLV+RL+G N ++G +++ ++   ++  +D  D 
Sbjct: 343 VTKPLVVRLDGNNAELGRKILTDANHPLVQQVDTMDG 379


>gi|10640675|emb|CAC12453.1| probable succinyl-CoA synthetase, beta subunit [Thermoplasma
           acidophilum]
          Length = 376

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 130/391 (33%), Positives = 215/391 (54%), Gaps = 30/391 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N++EY  K + R+Y +PV  G V+SSV         L  P+ V KSQI  GGRGK    
Sbjct: 12  LNLYEYMGKDIFRQYGIPVPNGYVVSSVDEVR----KLTNPVAV-KSQILLGGRGKA--- 63

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + + +   ++ +LG+ +           V  V +ED  +I  E Y+
Sbjct: 64  -------GGIKFAKTDQELKDAVKALLGAKVRN-------LTVTKVLIEDMLNIKHEYYV 109

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R++     IAS  GG++IE V     +KIFK +IDP +G +          + L 
Sbjct: 110 SITLNRSARAPTVIASAMGGVEIETVPD---EKIFKRIIDPSLGYSDFIGREASTFMGLS 166

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   DL   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A++RH +  
Sbjct: 167 PDLSKQFLDLLKKLYNVYKGEDAELVEINPLVETNDGKLIAADAKVVIDSDAMFRHRE-F 225

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D  E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFLD+G
Sbjct: 226 NIQDP-EKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFLDLG 284

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  + D V  AF ++   +  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+RL 
Sbjct: 285 GTDNVDIVVNAFDLVLE-AKPKAILVNIFGGVTKCDTVAQGIVDAKKKFDIKIPIVVRLS 343

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G + + G +++ E+G  +    ++  A +++
Sbjct: 344 GIHEEEGRQILKENG--IEAFSEMMPAIERV 372


>gi|16082611|ref|NP_394788.1| succinyl-CoA synthetase subunit beta [Thermoplasma acidophilum DSM
           1728]
          Length = 365

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 131/391 (33%), Positives = 215/391 (54%), Gaps = 30/391 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + R+Y +PV  G V+SSV         L  P+ V KSQI  GGRGK    
Sbjct: 1   MNLYEYMGKDIFRQYGIPVPNGYVVSSVDEVR----KLTNPVAV-KSQILLGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + + +   ++ +LG+ +           V  V +ED  +I  E Y+
Sbjct: 53  -------GGIKFAKTDQELKDAVKALLGAKVRN-------LTVTKVLIEDMLNIKHEYYV 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R++     IAS  GG++IE V     +KIFK +IDP +G +          + L 
Sbjct: 99  SITLNRSARAPTVIASAMGGVEIETVPD---EKIFKRIIDPSLGYSDFIGREASTFMGLS 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   DL   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A++RH +  
Sbjct: 156 PDLSKQFLDLLKKLYNVYKGEDAELVEINPLVETNDGKLIAADAKVVIDSDAMFRHRE-F 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D  E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFLD+G
Sbjct: 215 NIQDP-EKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFLDLG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  + D V  AF ++   +  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+RL 
Sbjct: 274 GTDNVDIVVNAFDLVLE-AKPKAILVNIFGGVTKCDTVAQGIVDAKKKFDIKIPIVVRLS 332

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G + + G +++ E+G  +    ++  A +++
Sbjct: 333 GIHEEEGRQILKENG--IEAFSEMMPAIERV 361


>gi|118431318|ref|NP_147696.2| succinyl-CoA synthetase beta chain [Aeropyrum pernix K1]
 gi|116062641|dbj|BAA80050.2| succinyl-CoA synthetase beta chain [Aeropyrum pernix K1]
          Length = 378

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 131/398 (32%), Positives = 212/398 (53%), Gaps = 24/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAGGRGKGRF 59
           M ++E++AK +LR Y V     V++       + I+     P  VVKSQ+   GRGK   
Sbjct: 1   MKLYEFEAKEILRMYGVETPPSVLVMPGDDVAAKIREAGLEPPLVVKSQVLVAGRGKA-- 58

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+++  S++  +    E+    +        G     + VE       ELY
Sbjct: 59  --------GGIKLVESVEDAVRVAGELWRKPI-------KGILPGALLVEKAVPHDAELY 103

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            S+++DR+      +AS  GGMDIEE+A++ P+ I +  +DP +G+   +   +   + L
Sbjct: 104 TSIIIDRSERRPVILASRFGGMDIEEIAREKPESIVRHYVDPFLGLRGYEARMVGKAIGL 163

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G+           LY+ F   +  L+E NPL I+ + ++  LD++I  DDN+L+RH ++
Sbjct: 164 SGRLLNSYASFLQVLYRVFTALEAELVESNPLAIVGD-KVVPLDARIIVDDNSLFRHREL 222

Query: 240 QELRDVSEEDS---REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            E R V +       E++A+Q  L ++ L+G+IG + NGAGL MATMD++  +GG PANF
Sbjct: 223 VERRRVEQRGEYTEWEVKARQQGLPFVELEGDIGIIGNGAGLTMATMDLVYHFGGRPANF 282

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GGGA  + V  A   +      + I IN+FGGI R D + +GI++AV+E   + PLV
Sbjct: 283 LDIGGGARAELVKKAVSFLLEFPKAEKIFINVFGGITRGDEVARGIVAAVRESGSSKPLV 342

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           +RL G   + G R++ E+G  +    D  +A +K+V  
Sbjct: 343 VRLSGTREEEGRRILEEAG--IYAYTDPVEAVKKVVSL 378


>gi|209885686|ref|YP_002289543.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
 gi|209873882|gb|ACI93678.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
          Length = 390

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 139/397 (35%), Positives = 223/397 (56%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  Y +P   G V  +   A +    L G    VK+Q+HAGGR +    
Sbjct: 1   MNLHEFQAKQILAGYGLPSPGGKVAITAEQAVAIYNELGGGDMAVKAQVHAGGRAQA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S K   +    +LG  L+T QTGP G  V  +Y+E   + +REL++
Sbjct: 58  -------GGVKIVHSEKEAKAVATSLLGKKLVTAQTGPAGRVVRRIYLEKAVEPVRELHV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+D +SG +    S +GG DIEE A     ++ +L +       +++VA+    + + 
Sbjct: 111 ALLIDGSSGTLTLFGSARGGDDIEERAARGELRLERLSLGDGSKRQADNVAAFATRIRID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +      +   L +AF D D SL+EINPL I+++G  + LD K+  +DNAL+RH D+ 
Sbjct: 171 AGSVAAFEKIVDGLRRAFVDLDASLIEINPLAILRDGSFQALDVKMVLEDNALFRHPDLT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  E D RE+EA++H L+++++DGNIG + NGAGL +A++D++   GG PANF+D+ 
Sbjct: 231 ALRDEDEIDHREVEAQRHQLNFVSMDGNIGVVANGAGLGLASVDLVCAAGGKPANFMDIR 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMR-CDVLVKGILSAVKEVKINIPLVMRL 359
             A    VA  F ++  + + + I +N+ GG M+ CD + +G+  A++    ++P+V RL
Sbjct: 291 TTATSLDVAYGFGLLLDNPATRAIFLNVHGGGMQPCDTIAEGLGIAMRRTGRSLPIVARL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N +         G  V+   D+  AA K+V   +
Sbjct: 351 AGNNAEFARSRFVNFGCPVVDCPDMWTAATKVVAIAQ 387


>gi|149238846|ref|XP_001525299.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450792|gb|EDK45048.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 313

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 132/310 (42%), Positives = 192/310 (61%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +L   LITKQTG  G  V  VY+ +  D  +E Y+++L+DR       +AS+QGGMDIE 
Sbjct: 1   MLNHKLITKQTGAAGKEVTAVYIVERRDADKEAYVAILMDRAKQTPMIVASSQGGMDIEG 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA+  P  I    +     ++ +    +  +L     A  +       L+K F ++D + 
Sbjct: 61  VAEKDPSAIKTFPVPLDANLSQDKATEIASVLGFSKDAIPEAAKTIQGLFKCFIERDCTQ 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINPL    + ++  +D+K+ FDDNA +R  ++   RD ++ED +E EA ++ L++I L
Sbjct: 121 VEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVYSWRDPTQEDPKEAEAAKYGLNFIKL 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNI  +VNGAGLAMATMDIIKL GG PANFLD GG A  + +  AF++I SD  V GI 
Sbjct: 181 DGNIANIVNGAGLAMATMDIIKLNGGEPANFLDCGGTATPETIEKAFELILSDKKVNGIF 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGI+RCD + KG+++A K  ++ IP+V+RL+G N+    +LI ESGL +    +LD
Sbjct: 241 VNIFGGIVRCDYVAKGLIAATKNFQLEIPVVVRLQGTNMAEAKKLIEESGLKLFAFENLD 300

Query: 386 DAAQKIVHAV 395
            AA+KIV   
Sbjct: 301 SAAEKIVELA 310


>gi|150400481|ref|YP_001324247.1| succinyl-CoA synthetase, beta subunit [Methanococcus aeolicus
           Nankai-3]
 gi|150013184|gb|ABR55635.1| succinyl-CoA synthetase, beta subunit [Methanococcus aeolicus
           Nankai-3]
          Length = 360

 Score =  345 bits (885), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 138/396 (34%), Positives = 204/396 (51%), Gaps = 36/396 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV  G V S        IK L  P  V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKKYKIPVPNGFVASKP------IKELKTP-SVIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    + K                      G +VN V +E+   I  E YL
Sbjct: 51  -------GGILFADTTKEANQ-------HIKKLIGKKIKGEKVNKVLIEEKLPIKYEYYL 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +DR       I ST+GG+DIEE+AK+ P+KI K  IDP          +L     L 
Sbjct: 97  GITIDRAEKKPVIIFSTEGGVDIEEIAKNTPEKIIKYYIDPQNEFLPYMARNLLKEAGLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LY  F D D +L+EINPL+I K+ ++   D  ++ DD+A YRH D  
Sbjct: 157 SNRISKVADIIYKLYNVFKDMDGTLVEINPLVITKDKKVLAADGVLNVDDDAEYRH-DYA 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +    SE+D       +   +Y+ LDG+I  + NGAGL +A+MDI+K YGGAPA FLD+G
Sbjct: 216 QFESYSEKD-------KSEFAYVELDGDIAVIGNGAGLTLASMDIVKEYGGAPACFLDIG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+D++ V  A +       +KG+ INI GGI RCD +  GI+ A  E    I   +R+ 
Sbjct: 269 GGSDKETVEKALEKALE-KDIKGVFINILGGITRCDEVAMGIVKAYYE-HPEIKFSVRMM 326

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G +++ ++G+   +   ++ A +K++  +K
Sbjct: 327 GTNEEEGRKILTKNGIPFES--SMEYAVEKLIDMLK 360


>gi|170782916|ref|YP_001711250.1| succinyl-CoA synthetase subunit beta [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157486|emb|CAQ02676.1| succinyl-CoA synthetase beta chain [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 390

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 135/392 (34%), Positives = 212/392 (54%), Gaps = 25/392 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ EYQA+ L   Y VPV  G+V  +     +A + L G + VVK+Q+  GGRGK     
Sbjct: 5   DLFEYQARDLFESYGVPVLPGIVADTAEEVRAAAEKLGGTV-VVKAQVKTGGRGKA---- 59

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV+V  S  +       ILG  +        G  V+ V V  GA I +E Y S
Sbjct: 60  ------GGVKVAQSAAAAYEAAEGILGLDI-------KGHTVHRVMVAAGARIAQEFYFS 106

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR       +AS +GGM+IEE+A   P+ + ++ IDP+ G+ +     +        
Sbjct: 107 ILLDRAERSYLCLASYEGGMEIEELAVTRPEALARIEIDPVAGIDAAKAEEIARAASFPE 166

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +       +F  L+  + D+D +L+E+NPL++ ++G    LD K++ D+NA +RH     
Sbjct: 167 ELIAKVAPVFERLWWVYRDEDATLVEVNPLVLTESGDSIALDGKVTLDENAGFRHEGHAA 226

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANF 296
           L D +  D  E +AK+ +L+Y+ LDG +G + NGAGL M+T+D++   G       PANF
Sbjct: 227 LEDAAAADPLEAKAKESDLNYVKLDGQVGIIGNGAGLVMSTLDVVSYAGEQHGGVRPANF 286

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INIP 354
           LD+GGGA  + +AA   +I  D  V  + +N+FGGI  CD +  GI+ A+ ++      P
Sbjct: 287 LDIGGGASAEVMAAGLDVILGDEQVTSVFVNVFGGITSCDAVANGIVGALDKLGDAATKP 346

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           LV+RL+G NV+ G R++ E    ++T +   D
Sbjct: 347 LVVRLDGNNVEEGRRILEERAHPLVTVVGTMD 378


>gi|325001241|ref|ZP_08122353.1| succinyl-CoA synthetase subunit beta [Pseudonocardia sp. P1]
          Length = 391

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 132/394 (33%), Positives = 211/394 (53%), Gaps = 26/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G  + +   A +A   L   + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKDLFAAHGVPVLPGKTVDNAADAAAAASELGTAV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S          ILG  +        G  V+ V V + +DI  E Y 
Sbjct: 57  -------GGVKLAQSADEAKEKAEAILGLDI-------KGHTVHQVLVTEASDISEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     + S +GGM+IEE+A + P+ + ++ IDP+ GV       +    ++ 
Sbjct: 103 SFLLDRSNRTFLAMCSAEGGMEIEELAVERPEALARIAIDPIAGVDKAKADEIVAAGKIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +  ++   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +RH    
Sbjct: 163 AAVADEAANVIVKLWETFVAEDATLVEVNPLVRDPQDKVIALDGKVTLDENAAFRHEAHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD-GNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           EL D   E+  E +AK   L+Y+ LD G +G + NGAGL M+T+D++   G       PA
Sbjct: 223 ELVDERTENPLEAKAKAKGLNYVKLDGGQVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--IN 352
           NFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMADGLDVILGDDEVKSVFVNVFGGITACDAVANGIVEALKILGDDAT 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            PLV+RL+G NV+ G +++A++   ++T +   D
Sbjct: 343 KPLVVRLDGNNVEEGRKILADANHPLVTVVGTMD 376


>gi|299133558|ref|ZP_07026752.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
 gi|298591394|gb|EFI51595.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
          Length = 390

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 138/397 (34%), Positives = 222/397 (55%), Gaps = 11/397 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HE+QAK +L  Y +P   G V  +   A +    L G    VK+Q+HAGGR +    
Sbjct: 1   MNLHEFQAKQILAGYGLPSPGGKVAITPDQAVAIYNELGGGAVAVKAQVHAGGRAQA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S K   S    +LG  L+T QTGP G  V  +Y+E   + +REL++
Sbjct: 58  -------GGVKIVHSEKEAKSVAASLLGKKLVTAQTGPAGRVVRRIYIEKAVEPVRELHV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +LL+D +SG +    S  GG DIEE A     ++ +L +       +++VA+    + + 
Sbjct: 111 ALLIDGSSGHLTLFGSAHGGGDIEERAARGELRLERLGLGDGSKRLADEVAAFASKIRID 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +      +   L +AF + D SL+EINPL ++++G  + LD K+  +DNAL+RH D+ 
Sbjct: 171 GASVPAFEAIVDGLRRAFVELDASLIEINPLAMLRDGSFQALDVKMVLEDNALFRHPDLT 230

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            LRD  + D RE+EA++H L+++++DGNIG + NGAGL +A++D++    G PANF+D+ 
Sbjct: 231 ALRDEDDIDQREVEAQRHQLNFVSMDGNIGIVANGAGLGLASVDLVYAAKGKPANFMDIR 290

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMR-CDVLVKGILSAVKEVKINIPLVMRL 359
             A    VA  F ++  + + + I +N+ GG M+ CD + +G+  A++    ++P+V RL
Sbjct: 291 TTATSLDVAYGFGLLLDNPATRAIFLNVHGGGMQPCDTIAEGLGIAMRRTGRSLPVVARL 350

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N +         G  VI   D+  AA K+V   +
Sbjct: 351 AGNNAEFARSRFVNFGCPVIDCPDMWTAATKVVAIAQ 387


>gi|256783949|ref|ZP_05522380.1| succinyl-CoA synthetase subunit beta [Streptomyces lividans TK24]
 gi|289767831|ref|ZP_06527209.1| succinyl-coa synthetase subunit beta [Streptomyces lividans TK24]
 gi|289698030|gb|EFD65459.1| succinyl-coa synthetase subunit beta [Streptomyces lividans TK24]
          Length = 383

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 135/389 (34%), Positives = 204/389 (52%), Gaps = 27/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L +++ + V +  V  S   A    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFKEHGIVVPRAEVTDSPERAREVARALGG-RAVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +         R ILG  +        G  V  V + +  DI RE Y+
Sbjct: 57  -------GGVRLAADPAEAEEAARRILGMDI-------RGHTVGTVMLAEPCDIEREFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR SG    IAS +GG +IEEVA   P+ + ++ +DP  GV +     + D   L 
Sbjct: 103 SYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D    L+K    +D  L+E+NPL+    GR+  LD K++ DDNA +R     
Sbjct: 163 P----QTVDTLVRLWKVLVREDALLVEVNPLVRTAEGRIVALDGKVTLDDNARFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQ--HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           E R   +ED+  +EA+     L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD
Sbjct: 219 ETR---QEDADSLEARAGAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPANFLD 275

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA    +A    ++ SD  V+ +L+N+FGGI  CD +  GI+ A+ EV++  PLV+R
Sbjct: 276 IGGGASARVMADGLSVVLSDPDVRSVLVNVFGGITACDAVADGIVRALDEVRLTKPLVVR 335

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDA 387
           L+G N   G  L+      ++      D 
Sbjct: 336 LDGNNAARGRALLDARAHPLVEQATTMDG 364


>gi|297619455|ref|YP_003707560.1| succinyl-CoA synthetase subunit beta [Methanococcus voltae A3]
 gi|297378432|gb|ADI36587.1| succinyl-CoA synthetase, beta subunit [Methanococcus voltae A3]
          Length = 363

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 133/397 (33%), Positives = 215/397 (54%), Gaps = 35/397 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AKA+ + Y +PV +  +          ++ +  P+ VVK+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKAIFKSYGIPVPESEITD------KKVENIDKPV-VVKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   ++ +     I E+L   +        G +V  V +ED  +I +E Y+
Sbjct: 51  -------GGILFANNTQEANEKIEELLNKEI-------KGEKVEKVLLEDMINIEKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR +     + ST+GG+DIE+VA+  P+KI K  +D           ++     + 
Sbjct: 97  GIVIDRNNKQAVVMFSTEGGVDIEQVAEKTPEKIIKYYVDFDKEFQPYMARNMLIKAGIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYKAF D D SL+EINPL+I K   +   D+  + DD+A Y+H D +
Sbjct: 157 SPEISKIATIISKLYKAFEDMDGSLIEINPLVITKEANVIAADAVFNLDDDAYYKH-DYK 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  + S++D       +   +Y+ LDG+I  + NGAGL +A+MDI+K  GG P+ FLDVG
Sbjct: 216 QFEEFSKQD-------KSEFAYVDLDGDIAVIGNGAGLTLASMDIVKNSGGEPSCFLDVG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG++ + V  A +   S   VKG+ INI GGI RCD + KGI+   K+   N+   +RL 
Sbjct: 269 GGSNSETVQKALRKALSKDGVKGVFINILGGITRCDEVSKGIVEVYKDYP-NVKFAVRLM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D G R++ E+G++  T   +D+AA+K++  ++ 
Sbjct: 328 GTNEDEGRRILNENGISFET--TMDNAAKKLMEIIQS 362


>gi|13541105|ref|NP_110793.1| succinyl-CoA synthetase subunit beta [Thermoplasma volcanium GSS1]
          Length = 365

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 127/391 (32%), Positives = 209/391 (53%), Gaps = 30/391 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + R+Y +PV  G V+SS    +            VKSQI  GGRGK    
Sbjct: 1   MNLYEYMGKDIFREYGIPVPNGYVVSSPQDVKK-----FTNPVAVKSQILLGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + + + + +  +L + +           V  V +ED  +I  E Y+
Sbjct: 53  -------GGIKFAKTDEELKNAVSTLLSTKVRNM-------TVTKVLIEDMLNIKHEYYV 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R +     IAS  GGM+IE V      KIFK +IDP +G +          + L 
Sbjct: 99  SIALNRAAKSPMLIASAMGGMEIENVPD---DKIFKRIIDPSLGYSDFIGREASQFMGLP 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A+YRH +  
Sbjct: 156 PELSKQFLDILKKLYNVYRGEDCELVEINPLVETGDGKLIAADAKVVIDSDAIYRHRE-F 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D  E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFLD+G
Sbjct: 215 SIQDP-EKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFLDLG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  + D V  AF ++   +  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+RL 
Sbjct: 274 GTDNVDIVINAFDLVLE-AKPKAILVNIFGGVTKCDTVAQGIVEAKKKFDIKIPVVVRLS 332

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G +   G +++ ++G  +    ++  A +++
Sbjct: 333 GVHEVEGRKILQDNG--IEAFSEMMPAIERV 361


>gi|21224885|ref|NP_630664.1| succinyl-CoA synthetase subunit beta [Streptomyces coelicolor
           A3(2)]
 gi|21264032|sp|O87840|SUCC2_STRCO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta-2;
           AltName: Full=Succinyl-CoA synthetase subunit beta-2;
           Short=SCS-beta-2
 gi|3288606|emb|CAA19778.1| succinyl-coa synthetase beta chain [Streptomyces coelicolor A3(2)]
          Length = 383

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 134/389 (34%), Positives = 205/389 (52%), Gaps = 27/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L +++ + V +  V  S   A    + L G   VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFKEHGIVVPRAEVTDSPERAREIARALGG-RAVVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+ +         R ILG  +        G  V+ V + +  +I RE Y+
Sbjct: 57  -------GGVRLAADPAEAEEAARHILGMDI-------RGHTVDTVMLAEPCEIEREFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR SG    IAS +GG +IEEVA   P+ + ++ +DP  GV +     + D   L 
Sbjct: 103 SYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D    L+K    +D  L+E+NPL+    GR+  LD K++ DDNA +R     
Sbjct: 163 P----QTVDTLVRLWKVLVREDALLVEVNPLVRTAEGRIVALDGKVTLDDNARFRQSRWG 218

Query: 241 ELRDVSEEDSREIEAKQ--HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           E R   +ED+  +EA+     L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD
Sbjct: 219 ETR---QEDADSLEARAGAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPANFLD 275

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGGA    +A    ++ SD  V+ +L+N+FGGI  CD +  GI+ A+ EV++  PLV+R
Sbjct: 276 IGGGASARVMADGLSVVLSDPDVRSVLVNVFGGITACDAVADGIVRALDEVRLTKPLVVR 335

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDA 387
           L+G N   G  L+      ++      D 
Sbjct: 336 LDGNNAARGRALLDARAHPLVEQATTMDG 364


>gi|20094168|ref|NP_614015.1| succinyl-CoA synthetase beta subunit [Methanopyrus kandleri AV19]
 gi|19887184|gb|AAM01945.1| Succinyl-CoA synthetase beta subunit [Methanopyrus kandleri AV19]
          Length = 359

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 133/394 (33%), Positives = 208/394 (52%), Gaps = 41/394 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EYQAK LL++  VP+ +G V  +   A      L GP+ V K+Q+  G RGK      
Sbjct: 4   LLEYQAKHLLKEAGVPIPEGDVARTSADAARIAAELGGPVAV-KAQVPVGARGKA----- 57

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GG+      +      R++LGS +        G  V  V VE+  DI  E Y+S+
Sbjct: 58  -----GGILFADDPEGARKAARKLLGSRI-------RGETVRKVLVEEKLDIAEEWYVSI 105

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +DR       + S +GG+DIEEV     +KI +  +DP++G+   +         +  +
Sbjct: 106 TLDRAKRRPVLLVSREGGVDIEEVPD---EKIARRYLDPILGLRPFEAREAILEAGIPKE 162

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD-DNALYRHLDIQE 241
              D  ++  ++Y+ F   D  L+EINPL++ +NG +   D+ ++ D D A  RH +  E
Sbjct: 163 HLRDVEEVITSMYEVFESYDAHLVEINPLVLTENGEVVAADAVVNLDEDAANIRHPEFAE 222

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
                         +  +  ++ LDG+IG + NGAGL MAT+D++K  GG PANFLDVGG
Sbjct: 223 --------------ETRDFPFVELDGDIGIIANGAGLTMATIDLVKDLGGKPANFLDVGG 268

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
           GA    +  A   +     VK IL+NIFGGI RCD + +GI+ A+ +  +++PLV+RL G
Sbjct: 269 GAYPTLIRRAILTVAE-LDVKVILLNIFGGITRCDEVAEGIVQALDD--VDVPLVVRLVG 325

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            N + G+R++ E G++V T  +L +A ++ V   
Sbjct: 326 TNEEEGHRILREHGVDVYT--ELKEAVERAVELA 357


>gi|29828360|ref|NP_822994.1| succinyl-CoA synthetase subunit beta [Streptomyces avermitilis
           MA-4680]
 gi|29605463|dbj|BAC69529.1| putative succinyl-CoA synthetase beta subunit [Streptomyces
           avermitilis MA-4680]
          Length = 376

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 131/396 (33%), Positives = 205/396 (51%), Gaps = 24/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L   + + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFADHGILVPRAEVTDSSQEARVIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V  V + +  DI  E Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGMDI-------KGHTVGKVMLAEPVDIEAEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS +GGM+IEEVA   P+ + ++ +DP  GVTS   A + +   L 
Sbjct: 103 SYVLDRAAGRFLAIASAEGGMEIEEVAATRPEAVARVPVDPAEGVTSAKAAEIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L++    +D  L+E+NPL+    G++  LD K++ DDNA +R     
Sbjct: 163 PAT----VDVLVRLWEVLLREDAVLVEVNPLVRTAQGQILALDGKVTLDDNARFRQTRWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                   D  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 A-EAAEHGDQLEAAAAAKGLNYVKLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD +VK + +N+FGGI  CD +  GI+ A+  V++  PLV+RL+
Sbjct: 278 GGASAQIMADGLSVILSDPAVKSVFVNVFGGITACDAVADGIVQALDTVRLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAV 395
           G N   G  ++      ++     +D AA++     
Sbjct: 338 GNNAARGRAILDGRRHPLVQQVTTMDGAARRAAQLA 373


>gi|331699080|ref|YP_004335319.1| succinyl-CoA ligase (ADP-forming) subunit beta [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953769|gb|AEA27466.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Pseudonocardia
           dioxanivorans CB1190]
          Length = 390

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 130/394 (32%), Positives = 207/394 (52%), Gaps = 26/394 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQAK L   + VPV  G  + +   A +A   L   + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEYQAKELFAAHGVPVLPGRTVETADDAAAAAAELGTAV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G  V+ V V   +DI  E Y 
Sbjct: 57  -------GGVKLAENADEAKEKAGAILGMDI-------KGHTVHRVLVTTASDIAEEYYF 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     + S +GGM+IE++A + P  + ++ +D + GV       +    ++ 
Sbjct: 103 SFLLDRSNRTFLAMCSAEGGMEIEQLAVERPDALARIPVDAIAGVDKAKADEIVAAGKIP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   L++ F  +D +L+E+NPL+     ++  LD K++ D+NA +RH D  
Sbjct: 163 AAVAEEAAQVIVKLWETFVSEDATLVEVNPLVRDPQDKVIALDGKVTLDENADFRHPDHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
            L D   E++ E +AK   L+Y+ L DG +G + NGAGL M+T+D++   G       PA
Sbjct: 223 GLVDERTENALEAKAKAKGLNYVKLDDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPA 282

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--IN 352
           NFLD+GGGA    +A    +I  D  VK + +N+FGGI  CD +  GI+ A+K +     
Sbjct: 283 NFLDIGGGASAQVMADGLDVILGDPDVKSVFVNVFGGITACDAVATGIVEALKILGDAAT 342

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            PLV+RL+G NV  G R++ E+   ++T +D  D
Sbjct: 343 KPLVVRLDGNNVIEGRRILDEANHPLVTQVDTMD 376


>gi|255945469|ref|XP_002563502.1| Pc20g10080 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588237|emb|CAP86337.1| Pc20g10080 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 417

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 143/395 (36%), Positives = 227/395 (57%), Gaps = 10/395 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+ +  LL+++ +PV  G ++++   A+  +  L GP  ++K+Q+ AGGRGKG+F 
Sbjct: 25  LSLLEHHSHNLLKEFKIPVPPGFLVTTPEKAKEVVSVLNGPS-MIKAQVLAGGRGKGKF- 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D + GVR+  S      +   +LG  L T QT   G RV+ +Y+     I +E Y 
Sbjct: 83  --NSDGQSGVRLVESPNEAFRNATNMLGYYLTTAQTPQDGLRVDELYIYKAVSIAQEFYF 140

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++  DR       + S+ GG +IE    +    + KL      G+T E  A +   L   
Sbjct: 141 AMTFDRQRAAPVLLISSAGGTNIESNMDN----LHKLYFGLSTGITDEIDAYIQAELGFS 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   + K F +KD +LLE+NPL+    G    LD+K  FDD A YR  ++ 
Sbjct: 197 DAEMKDIHRILVQMLKLFKEKDATLLELNPLVRSGEGEFICLDAKFGFDDAARYRQKELF 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L + S E   E +  +  L+Y+ L+GNIG +VNGAGLAMAT D+I L+GG  ANFLDVG
Sbjct: 257 GLEERSPEQEEEHQLAELGLNYVRLEGNIGNIVNGAGLAMATNDLISLHGGKCANFLDVG 316

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
           G   ++ ++ AF+I+ +D  ++GILINI+GGI+RCD++ + I++A  E+     P+V+RL
Sbjct: 317 GSTTKEALSRAFRILKNDQRIRGILINIYGGIVRCDMIAEAIVAAAAEMGGFKCPVVVRL 376

Query: 360 EGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVH 393
           +G N + G +LI +S L N++   + + AAQ+IV 
Sbjct: 377 QGTNAEKGLKLIEQSELDNLVVEPEFEKAAQRIVK 411


>gi|14324489|dbj|BAB59417.1| succinyl-CoA synthetase beta subunit [Thermoplasma volcanium GSS1]
          Length = 384

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 126/391 (32%), Positives = 209/391 (53%), Gaps = 30/391 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N++EY  K + R+Y +PV  G V+SS    +            VKSQI  GGRGK    
Sbjct: 20  LNLYEYMGKDIFREYGIPVPNGYVVSSPQDVKK-----FTNPVAVKSQILLGGRGKA--- 71

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + + + + +  +L + +           V  V +ED  +I  E Y+
Sbjct: 72  -------GGIKFAKTDEELKNAVSTLLSTKVRNM-------TVTKVLIEDMLNIKHEYYV 117

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R +     IAS  GGM+IE V      KIFK +IDP +G +          + L 
Sbjct: 118 SIALNRAAKSPMLIASAMGGMEIENVPD---DKIFKRIIDPSLGYSDFIGREASQFMGLP 174

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   LY  +  +D  L+EINPL+   +G+L   D+K+  D +A+YRH +  
Sbjct: 175 PELSKQFLDILKKLYNVYRGEDCELVEINPLVETGDGKLIAADAKVVIDSDAIYRHRE-F 233

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            ++D  E+   E++A+    +++ LDG+IG + NGAGL MAT+D + L+ G P NFLD+G
Sbjct: 234 SIQDP-EKTPLELKAEGKGYAFVELDGDIGVIANGAGLTMATLDALLLHKGKPRNFLDLG 292

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  + D V  AF ++   +  K IL+NIFGG+ +CD + +GI+ A K+  I IP+V+RL 
Sbjct: 293 GTDNVDIVINAFDLVLE-AKPKAILVNIFGGVTKCDTVAQGIVEAKKKFDIKIPVVVRLS 351

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G +   G +++ ++G  +    ++  A +++
Sbjct: 352 GVHEVEGRKILQDNG--IEAFSEMMPAIERV 380


>gi|71398764|ref|XP_802641.1| succinyl-CoA ligase [GDP-forming] subunit beta [Trypanosoma cruzi
           strain CL Brener]
 gi|70864362|gb|EAN81195.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
           cruzi]
          Length = 319

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 147/306 (48%), Positives = 216/306 (70%), Gaps = 2/306 (0%)

Query: 83  IREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLLVDRTSGMVAFIASTQGGM 141
            +++L  TL+TKQTGP G RVN +YV +    I RELYL+LL+DR +    FI S +GGM
Sbjct: 1   AKKMLNKTLVTKQTGPKGQRVNLLYVTEAVTGIKRELYLALLLDRKTASPMFIGSAEGGM 60

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
            IEE+A+  P+KI ++ I+   G++ ++  +    L   G+A  +  +    LY     K
Sbjct: 61  GIEELAQKCPEKIKRMRINVQEGISHDNCVAFAKELGFSGRASENAAEQVKALYNVGKSK 120

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D + +EINPL+ ++NG +  +D+K+SFDDNA +R  DI  L D ++ D +E+ AK+++L+
Sbjct: 121 DCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIFSLADDTQIDPKEVLAKKYDLN 180

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           YIALDGN+GC+VNGAGLAMATMD+I + GG PANFLDVGG A ++++ AAF+IIT D  V
Sbjct: 181 YIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVGGSATREQIVAAFQIITGDEKV 240

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVK-INIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           KGIL+NIFGGIMRCD++ +GI++A +E+K  NIP+V+RL G+  + G R++ ESGL +  
Sbjct: 241 KGILVNIFGGIMRCDIIAEGIVAASRELKDRNIPVVVRLSGSKEEEGKRILQESGLPLHP 300

Query: 381 AIDLDD 386
           A + ++
Sbjct: 301 ARNFEE 306


>gi|33519793|ref|NP_878625.1| succinyl-CoA synthetase beta chain [Candidatus Blochmannia
           floridanus]
 gi|33504138|emb|CAD83400.1| succinyl-CoA synthetase beta chain [Candidatus Blochmannia
           floridanus]
          Length = 399

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 159/409 (38%), Positives = 239/409 (58%), Gaps = 23/409 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           MN++EYQAK L +++N+P+ K  +I+     +  I  +   GP ++VK QI         
Sbjct: 1   MNLYEYQAKQLFKQFNIPILKNHIITETSEIKDCISEIIKEGPPWIVKCQI--------- 51

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            +       GGV++ +S++ +++      G  L+T QT   G RVN + +E   +I  E 
Sbjct: 52  -RSGGRGKSGGVQIVNSMEDMLAFANRWFGKNLVTYQTTVDGERVNSILIEPAVNIAHEF 110

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKD---YPQKIFKLLIDPLIGVTSEDVASLCD 175
           YLS+L+DR    +  I ST+GG+DIE V  +       I+K+ IDPLIG  +     L  
Sbjct: 111 YLSILIDRDLSNIICIVSTKGGVDIENVIHESVSTSDVIYKISIDPLIGACAYQGRLLAS 170

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            L L G       D++ NL + F +KD++L+EINPLII KN  L  LD+K+S D NAL+R
Sbjct: 171 KLSLSGTQINQFTDMYINLVRMFIEKDLTLIEINPLIINKNNDLLCLDAKVSIDRNALFR 230

Query: 236 HLDIQEL--RDVSEEDSREIE---AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
            LD+  L  ++ +  D+  +    +K   ++Y+ALDGNIG +VNGAGLAMATMD+IKL+G
Sbjct: 231 QLDLVNLFLKNNNPNDNSHLPKLYSKYGGVNYVALDGNIGLLVNGAGLAMATMDLIKLFG 290

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV--KE 348
           G PANFLD+GG  +Q+ +  A K +    S+K I INIFGGI+ C ++   I+  +  + 
Sbjct: 291 GNPANFLDIGGDTNQESITEALKKLFKQESIKVIFINIFGGIVCCKLIADSIIHTLFDEH 350

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVK 396
            ++NIP+V+RLEG N  +G   +  +    VI   +L +A  KI+  VK
Sbjct: 351 TELNIPIVVRLEGNNAKMGIDKLINANFKNVIIINNLINAVHKIMELVK 399


>gi|170291005|ref|YP_001737821.1| succinyl-CoA synthetase, beta subunit [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175085|gb|ACB08138.1| succinyl-CoA synthetase, beta subunit [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 378

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/397 (35%), Positives = 217/397 (54%), Gaps = 22/397 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY++K  L    +P+ KG++      A SA++ L G   V+K QI  G RGK    
Sbjct: 1   MRLLEYESKEALASKGIPIPKGILARDPEEAASAVEKLGG-RGVLKIQIPHGQRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +S        +E+   T         G  V+ + VE+  D   E+Y+
Sbjct: 57  -------GGIKLVNSPNEAREVAKELFSRTFY-------GYEVSSLLVEEPVDTATEIYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLEL 179
             ++DR S  + FI++  GGMD+EE+A  +P+ I K  + PL+G+ S    +L     + 
Sbjct: 103 GGIIDRNSRGMTFISTPYGGMDVEEIAASHPESIEKRTVHPLMGMRSHIARALAKNAAKN 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                 +   +  +L+    + D  +LEINPL + K+GRL  LD++I  DDNAL+RH++ 
Sbjct: 163 VPDKVNEIQRIISSLWDVAVEYDAVMLEINPLALTKDGRLVALDARIEVDDNALFRHME- 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E R  S E+ RE EA++ +++Y+ LDGNIG M NGAGLAMATMD++  +GG PANF DV
Sbjct: 222 FEKRYYSSENPRENEARKRDIAYVELDGNIGTMANGAGLAMATMDLVHTFGGKPANFCDV 281

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  D+VA A +II S+     +LIN   GI     +  G+ S  ++  + IP+V+R+
Sbjct: 282 GGGASADRVANALEIILSNPRASVVLINTLCGITSALDVALGVKSIKEKGLLKIPVVVRM 341

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D G R++ E G+        ++A +  V   K
Sbjct: 342 SGNQADEGKRILEEIGIK--ATESAEEAVRYAVELAK 376


>gi|315426475|dbj|BAJ48108.1| succinyl-CoA synthetase beta subunit [Candidatus Caldiarchaeum
           subterraneum]
          Length = 374

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 137/384 (35%), Positives = 217/384 (56%), Gaps = 23/384 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++ + L R+Y +PV   VV+ S   A  A + L G   VVK+Q+   GRGK    
Sbjct: 2   MKLYEFEGRELFRRYGIPVNNYVVVRSAEEARRAAEALGG-RTVVKAQVLVAGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++  +    ++L S +        G RV  + V +  ++++ELYL
Sbjct: 58  -------GGVKVAENVEEAVMLAGKMLRSEI-------KGERVESLVVTEYTEVVKELYL 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       IAS +GG++IEE+A+  P  + K  ++PL+G+    V  +   ++L 
Sbjct: 104 GIIVDRFKRAPVVIASAEGGVEIEELARTSPGHVLKTEVNPLLGLADYQVRKIISFMKLD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY+ F + D  L EINPL+I  + RL  LDSKI  DDNAL+R  +  
Sbjct: 164 QKLAQQAAAILRGLYRLFVENDCELAEINPLVITPDNRLVALDSKIIVDDNALFRRGEFS 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                +  ++   EA++   + + LDG+IG + NGAGL MATMD++KL GG+PANFLDVG
Sbjct: 224 RPESGTGLEA---EARRLGFAAVELDGDIGIIGNGAGLTMATMDMVKLKGGSPANFLDVG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V  A +++ +   VK + +NI GGI RCD + +G++SA K V     +V+R+ 
Sbjct: 281 GGASEDVVEKAARLLLTHPRVKVVFVNILGGITRCDEVARGLVSAYKSVGAGKKIVVRMM 340

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N + G R++ E+G  +     +
Sbjct: 341 GTNEEEGKRILIENG--IYPLDSM 362


>gi|261403710|ref|YP_003247934.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus vulcanius
           M7]
 gi|261370703|gb|ACX73452.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus vulcanius
           M7]
          Length = 364

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 131/393 (33%), Positives = 204/393 (51%), Gaps = 31/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY +PV +  +IS      S          V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKNIFKKYGIPVPESFLISKEDDLNSINID---KEVVLKAQVLVGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   S+    I    E+    +        G +V  + VE+   I +E Y+
Sbjct: 55  -------GGILFASNKGEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     I ST+GG+DIEEVA+  P+KI K  ID            +    +L 
Sbjct: 101 SIIIDRDAKKPVIIFSTEGGVDIEEVAEKNPEKIIKYYIDIKKPFLPYITRWIVKDAKLP 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   LYK F + D +++EINPL+I KNG +   D+ +  DD+A ++H    
Sbjct: 161 SNEIGKVADVIYKLYKIFKELDATMVEINPLVITKNGDVYAADAVLHLDDDASFKH---- 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E        ++   +Y+ L+G++  + NGAGL +A+MDII   G  PA FLD+G
Sbjct: 217 ----NYEGFEEYKNKEKLPFAYVELEGDVAVIGNGAGLTLASMDIINNLGRKPACFLDIG 272

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ + V  A K +  + +VKGI INI GGI RCD + KGI+  +KE   NI   +R+ 
Sbjct: 273 GGAEAETVKLALKKVLENKNVKGIFINILGGITRCDEVAKGIVDVLKE-HPNIKFAVRMM 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           G N +IG +++ E G+   T   +++A +K++ 
Sbjct: 332 GTNEEIGRKILEEHGIPYET--SMEEAGRKLIE 362


>gi|229817638|ref|ZP_04447920.1| hypothetical protein BIFANG_02908 [Bifidobacterium angulatum DSM
           20098]
 gi|229785427|gb|EEP21541.1| hypothetical protein BIFANG_02908 [Bifidobacterium angulatum DSM
           20098]
          Length = 397

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 131/408 (32%), Positives = 213/408 (52%), Gaps = 31/408 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  KG+   + H    A + L  P  VVK+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQGIPTPKGIYAQNSHEVAEAAEKLGYP-NVVKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    EIL  T+          +VN V V +G +IL E Y+
Sbjct: 57  -------GGVKLAKTRDEAILASEEILPMTIHN-------HKVNGVLVAEGKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L I+ L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIEALADFDMEAARKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR------LRVLDSKISFDDNALY 234
                   D+   +++ F + D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVDQAADILLKMWRCFKENDATLVEINPLAKIGDPDDESSKMLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E  AK+H L Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFDDPMANDELERRAKEHGLHYVHLHGQVGVIGNGAGLVMSSLDAVSGAGEDLG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +AA+  I+ SD  VK + IN++GGI  C+ + +GIL A++ 
Sbjct: 283 SNVKPANFLDIGGGASAEVMAASLGIVLSDPQVKSVFINVYGGITSCEQVAQGILEALES 342

Query: 349 VKINIPLVMRLEGANVDIGNRLI-AESGLNVITAIDLDDAAQKIVHAV 395
           +    P+++R +G     G  ++ A +  N+  A  +++AA +     
Sbjct: 343 LPSVKPIIVRFDGNAAAEGLSILGASNNPNIHVASTMEEAAYEAARIA 390


>gi|222445221|ref|ZP_03607736.1| hypothetical protein METSMIALI_00849 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434786|gb|EEE41951.1| hypothetical protein METSMIALI_00849 [Methanobrevibacter smithii
           DSM 2375]
          Length = 371

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 122/394 (30%), Positives = 206/394 (52%), Gaps = 31/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK +  +  +P+ +G V +S   A S    +  P+ + KSQ+  GGRGK    
Sbjct: 1   MKFFEYMAKRIFNEEGIPILEGHVANSAEEATSIASDMGVPVAI-KSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +          ++G+T+        G RV+ + +E  A+I++E +L
Sbjct: 57  -------GGIKFADNPGEAYKVADSLIGTTI-------NGERVHQLLIEKKANIIKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     + S +GG++IE +AK  P+KI K   +PLI     +   +   + + 
Sbjct: 103 SISIDRANKRPVIMVSNEGGVEIENLAKTNPEKIIKYHPNPLIEFLPYESREIARKMGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     GD+   LYK F   D    EINPL++   G L   D+K   ++++LYRH D+ 
Sbjct: 163 SELISPMGDVIYKLYKLFEKYDAETAEINPLVLTDEG-LIAADAKFVVENDSLYRHPDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L             K+  + ++ LDG+I  + NGAGL +  MD+IK +GG PA FLD+G
Sbjct: 222 KL----------ARYKKKAVDFVKLDGDIAVIGNGAGLTLTGMDMIKFHGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  +  I+ +   VK + +N+ GGI + D +  G++ A+KE K  + +V+RL 
Sbjct: 272 GGASEESIKKSLNIVLNYEPVKVVFLNVLGGITKADDVAHGVVDAIKESKSLVSIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N + G R++ E+G+       ++ AA+K V  
Sbjct: 332 GTNEEEGQRILEEAGIPYEI--SMEKAAKKAVEL 363


>gi|261350219|ref|ZP_05975636.1| succinyl-CoA synthetase, beta subunit [Methanobrevibacter smithii
           DSM 2374]
 gi|288861005|gb|EFC93303.1| succinyl-CoA synthetase, beta subunit [Methanobrevibacter smithii
           DSM 2374]
          Length = 371

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 122/394 (30%), Positives = 206/394 (52%), Gaps = 31/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK +  +  +P+ +G V +S   A S    +  P+ + KSQ+  GGRGK    
Sbjct: 1   MKFFEYMAKRIFNEEGIPILEGHVANSAEEATSIASDMGVPVAI-KSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +          ++G+T+        G RV+ + +E  A+I++E +L
Sbjct: 57  -------GGIKFADNPGEAYKVADSLIGTTI-------NGERVHQLLIEKKANIIKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     + S +GG++IE +AK  P+KI K   +PLI     +   +   + + 
Sbjct: 103 SISIDRANKRPVIMVSNEGGIEIENLAKTNPEKIIKYHPNPLIEFLPYESREIARKMGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     GD+   LYK F   D    EINPL++   G L   D+K   ++++LYRH D+ 
Sbjct: 163 SELISPMGDVIYKLYKLFEKYDAETAEINPLVLTDEG-LIAADAKFVVENDSLYRHPDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L             K+  + ++ LDG+I  + NGAGL +  MD+IK +GG PA FLD+G
Sbjct: 222 KL----------ARYKKKAVDFVKLDGDIAVIGNGAGLTLTGMDMIKFHGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  +  I+ +   VK + +N+ GGI + D +  G++ A+KE K  + +V+RL 
Sbjct: 272 GGASEESIKKSLNIVLNYEPVKVVFLNVLGGITKADDVAHGVVDAIKESKSLVSIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N + G R++ E+G+       ++ AA+K V  
Sbjct: 332 GTNEEEGQRILEEAGIPYEI--SMEKAAKKAVEL 363


>gi|48478075|ref|YP_023781.1| succinyl-CoA synthetase subunit beta [Picrophilus torridus DSM
           9790]
 gi|48430723|gb|AAT43588.1| succinyl-CoA synthetase beta chain [Picrophilus torridus DSM 9790]
          Length = 368

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 143/397 (36%), Positives = 211/397 (53%), Gaps = 30/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + R Y +PV  G  I                   +KSQI  G RGK    
Sbjct: 1   MNLYEYMGKEIFRNYGIPVPDGYTIEKTDEIRDV-----SYPVAIKSQILIGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +    +    E+LGS +        G  V  + +E   DI +ELYL
Sbjct: 53  -------GGIKFADNKNDAVKYASELLGSKI-------NGMTVTKLLIEKKLDIKKELYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DRT+     IAST+GGMDIEEV      KI K +IDPLIG +      +   ++L 
Sbjct: 99  SITMDRTNRAPVIIASTEGGMDIEEVPD---DKIVKRVIDPLIGYSQYIGREIVSSMKLD 155

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   ++   LY+ F  +D  L+EINPL+I  N  +   DSKI  DDNAL+RH +I 
Sbjct: 156 ADLSKSFLEILERLYRVFMGEDALLVEINPLVIDGNKNIIAADSKIVLDDNALFRHKEI- 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +RD  E+   EIE++  + ++I +DG+IG + NGAGL MAT+D + L+   P NFLD+G
Sbjct: 215 NIRDP-EKTELEIESQSKSFTFIEMDGDIGVIANGAGLTMATLDALTLHNLKPRNFLDLG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G    D V  AF  +   +    I +NIFGG+ + D +  GI+++ KE  I  P+V+RL 
Sbjct: 274 GTDSIDIVKDAFSFVMK-ADPDIIFVNIFGGVTKADTVANGIVASKKEFNITKPIVVRLS 332

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G + D G R++ ++G+N  +  +++DA   IV   +G
Sbjct: 333 GIHEDEGRRILKDNGINAFS--NMNDAILDIVKIKEG 367


>gi|332295922|ref|YP_004437845.1| succinyl-CoA synthetase, beta subunit [Thermodesulfobium narugense
           DSM 14796]
 gi|332179025|gb|AEE14714.1| succinyl-CoA synthetase, beta subunit [Thermodesulfobium narugense
           DSM 14796]
          Length = 365

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 143/395 (36%), Positives = 217/395 (54%), Gaps = 32/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK++L +Y + V KGV+I      +  +  L  P  V+K+Q+  GGRGK    
Sbjct: 1   MRLFEYQAKSILSEY-LNVPKGVIIDK-ENVDQVVTKLNFPC-VLKAQVKVGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV        + + + ++    +        G +VN +  E+  DI RELY 
Sbjct: 55  -------GGVLKVKDSNELKNALEKLFSMEI-------KGEKVNRILAEELIDIDRELYF 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++  R S     +   +GG+DIE++A+  P  I K+ +DP+IG+    + +L    EL 
Sbjct: 101 SVIFYRPSRRYMMVFCKEGGVDIEQLAEAKPDAINKVKVDPIIGIKDFMIRNLIKDFELY 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                       + YK F +KD+ +LEINPL+I KN  +   D+K+ FDDNALY+H + +
Sbjct: 161 NIL----NQFVKSAYKIFVEKDLVMLEINPLVITKNKEVICADAKVEFDDNALYKHPEFE 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              + SE     IEA++   S++ L+G+IG + NGAGL +AT+D +   GG  ANFLD+G
Sbjct: 217 AFLEQSE-----IEARKLGFSFVPLEGDIGILGNGAGLVLATIDSVTRAGGKCANFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  ++V +A K +     +KGILIN+FGGI R D + KG+L   +E K+N+P+V+RL 
Sbjct: 272 GGAKAERVKSALKFLVEQKKLKGILINVFGGITRADEVAKGLLEFEEEQKLNLPVVVRLS 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G   + G  ++ E          L D A+KIV  V
Sbjct: 332 GTKAEEGLEMLKER---FEIVSSLRDGAKKIVELV 363


>gi|15679054|ref|NP_276171.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|6647835|sp|O27115|SUCC_METTH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
           AltName: Full=Succinyl-CoA synthetase subunit beta;
           Short=SCS-beta
 gi|2622139|gb|AAB85532.1| succinyl-CoA synthetase, beta subunit [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 365

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 133/398 (33%), Positives = 209/398 (52%), Gaps = 33/398 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M  +EY AK + R   +   +G V  +   AE     L   + V KSQ+  GGRGK    
Sbjct: 1   MKFYEYSAKEIFRAEGISTPRGGVAETPEEAERIAAELGCDVAV-KSQVLTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   S   V     ++L S +        G  V  V +E+   I RELY+
Sbjct: 57  -------GGIRFA-SPSGVAEVTGDLLSSEV-------RGETVEKVLIEEKIPIDRELYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DRT+ M   +AS +GG+DIEE+A   P+KI +  I+PL      +   +   + L+
Sbjct: 102 SAVIDRTAKMPLIMASAEGGVDIEELAARSPEKIVRYHINPLDEFLPYEAREIARKMGLE 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   LY+ F   D  L EINPL+I  +  +   D+K+  DD+++YRH    
Sbjct: 162 SELIPSVGGVIWKLYQLFRKYDARLAEINPLVISGD-SVIAADAKLEVDDDSIYRHR--- 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                  E     E +    +++ LDG+I  + NGAGL +  MD+IKL G  PA FLD+G
Sbjct: 218 -------EFMEMEEYEPEEFAFVKLDGDIAVIGNGAGLTLTAMDLIKLNG-EPATFLDIG 269

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D +  A  ++ S  SV+ + +N+ GGI R D + +G+++A+++ + ++PLV+RL 
Sbjct: 270 GGASEDVIRRALDLVISHPSVRVVFLNVLGGITRADDVARGVVNALRDARRDVPLVIRLT 329

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           G N + G R++ E+G+   T   L+ AA+K V   K +
Sbjct: 330 GTNEEEGQRILREAGIPFET--SLERAAEKAVEIAKNL 365


>gi|78043370|ref|YP_359761.1| succinyl-CoA synthetase subunit beta [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995485|gb|ABB14384.1| succinyl-CoA synthetase, beta subunit [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 373

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 143/396 (36%), Positives = 219/396 (55%), Gaps = 28/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQ K ++R++ + V +G V   +  A++ ++ +     V+K+Q+  GGRGK    
Sbjct: 1   MKLFEYQVKKIMREFGILVPRGEVFFDLEQAKNHLEKVGEG--VIKAQVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ S+          IL  T+        G +V  + +E+   I +ELYL
Sbjct: 56  -------GGVKIFSNPAEGFELAEAILKMTI-------KGEKVQAILIEEKIPIEQELYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD        IAS  GG+DIEEV +   ++I KL +DPLIGV +     +   L L 
Sbjct: 102 SIFVDGRIKKPVVIASKAGGVDIEEVPE---EEILKLPVDPLIGVRNYHGNLVAQKLGLT 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        L  NLY+ F      L+EINPL+I +  +L   D K++ DD+A +R     
Sbjct: 159 GDLGKQLATLLINLYRIFETYQAELVEINPLVISRE-KLIAADGKMTVDDDARFRWP--A 215

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L    E+   E  A++  +S++ LDG+I  M NGAG+ MAT+D+I  +GG P NF+D G
Sbjct: 216 DLPFNEEKTPLEKRAEEIGVSFVELDGDIAVMANGAGITMATLDLIAYFGGRPKNFMDAG 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+ +++A A  ++ S ++ K ILINIFGGI RCD + K  L+  +E +I +P+V+RL 
Sbjct: 276 GGANAEQMAKALDLLIS-TNPKAILINIFGGITRCDEVAKAYLTVKQEREITVPVVIRLV 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N DIG +++ E+G  V +   L +A  K V   K
Sbjct: 335 GTNEDIGVKMLQEAG--VESFSSLREAVIKAVELAK 368


>gi|94502252|ref|ZP_01308737.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           str. Hc (Homalodisca coagulata)]
 gi|161833698|ref|YP_001597894.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           GWSS]
 gi|94451190|gb|EAT14130.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           str. Hc (Homalodisca coagulata)]
 gi|152206188|gb|ABS30498.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           GWSS]
          Length = 391

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 156/403 (38%), Positives = 225/403 (55%), Gaps = 24/403 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQAK +L  + V V   +   ++     A K +       + V+K+QIHA     
Sbjct: 1   MNLHEYQAKKILATFGVKVPYSINALNIEETVYAAKKVFKKTKEYICVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA---D 113
                      GG+++   +  V     +ILG  L+T QT   G  VN V + +     +
Sbjct: 56  -----GGRGKGGGIKISKYIDDVYKKSSKILGRRLVTNQTNNKGKIVNKVLISEYVFNTE 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E Y+S+  DR       + S +GG++IE   K   +KIF   IDP IG+    +  +
Sbjct: 111 KENEYYISIFYDRNIYQNRILYSKEGGLEIES--KYRYKKIFLQKIDPYIGIQDFLIRKI 168

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L+++  A I       N+Y A+   D SLLEINP+ I KN  +  +D+K+  DDNAL
Sbjct: 169 AFNLKIKYSAFIRFKTFIRNIYNAYIYSDASLLEINPVFITKNNEILAIDAKVILDDNAL 228

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH+D +E+ D  E D  E+EAK+  L+Y+ LDG + CMVNGAGLAM+TMD+IKLYG  P
Sbjct: 229 FRHMDYKEMYDEKEYDLIELEAKKAGLNYLKLDGEVACMVNGAGLAMSTMDMIKLYGANP 288

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GG AD   +   F II  D  VK ILINIFGGI+RCD++ +GI++   +  IN 
Sbjct: 289 ANFLDLGGKADSKCIKKGFDIILKDKKVKIILINIFGGIVRCDIVAEGIINYFNK-SINK 347

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT----AIDLDDAAQKIV 392
            +++RLEG NV++  +LI  S   +         L++AA KI+
Sbjct: 348 KIILRLEGTNVNLAKKLINNSNSIINNSIIYVTSLEEAANKII 390


>gi|293977808|ref|YP_003543238.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           DMIN]
 gi|292667739|gb|ADE35374.1| succinyl-CoA synthetase, beta subunit [Candidatus Sulcia muelleri
           DMIN]
          Length = 392

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 157/404 (38%), Positives = 225/404 (55%), Gaps = 22/404 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           MN+HEYQAK +L  + V V   +   ++     A K +       + V+K+QIHA     
Sbjct: 1   MNLHEYQAKKILATFGVKVPYSINALNIEETVYAAKKVFKKTKEYICVIKAQIHA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA---D 113
                      GG+++   +  V      ILG  L+T QT   G  VN V + +     +
Sbjct: 56  -----GGRGKGGGIKISKYIDDVYKKSSNILGRRLVTNQTNNKGKIVNKVLISEYVFNTE 110

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E Y+S+  DR       + S +GG++IE   K   +KIF   IDP IG+    +  +
Sbjct: 111 KENEYYISIFYDRNIYKNRILYSKEGGLEIES--KYRYKKIFFQKIDPYIGIQDFLIRKI 168

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              L+++  A I       N+Y A+   D SLLEINP+ I KN  +  +D+K+  DDNAL
Sbjct: 169 AFNLKIKYSAFIRFKTFIRNIYNAYIYSDASLLEINPVFITKNNEILAIDAKVILDDNAL 228

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH+D +E+ D  E D  E+EAK+  L+Y+ LDG + CMVNGAGLAM+TMD+IKLYG  P
Sbjct: 229 FRHMDYKEMYDEKEYDLIELEAKKAGLNYLKLDGEVACMVNGAGLAMSTMDMIKLYGANP 288

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GG AD   +   F II  D  VK ILINIFGGI+RCD++ +GI++   +  IN 
Sbjct: 289 ANFLDLGGKADSKCIKKGFDIILKDKKVKIILINIFGGIVRCDIVAEGIINYFNK-SINK 347

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVIT--AIDLDDAAQKIVHAV 395
            +++RLEG NV++  +LI  S +N        L++AA KI   +
Sbjct: 348 KIILRLEGTNVNLAKKLINNSIINNSIIYVTSLEEAANKIKKII 391


>gi|288561080|ref|YP_003424566.1| succinyl-CoA synthetase beta subunit SucC [Methanobrevibacter
           ruminantium M1]
 gi|288543790|gb|ADC47674.1| succinyl-CoA synthetase beta subunit SucC [Methanobrevibacter
           ruminantium M1]
          Length = 374

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 117/394 (29%), Positives = 206/394 (52%), Gaps = 31/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   E+ AK +     + + +G V+ S   A         P+ V+KSQ+  GGRGK    
Sbjct: 1   MKFFEHSAKKVFESEGIKILEGHVVYSPEEAMEVATEFGRPI-VLKSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +    +    E+L   +        G +V  + +E+ A+I +E +L
Sbjct: 57  -------GGIKFADNPGEALEIANELLKLEI-------KGEKVKHLLIEEKANIKKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+  DR +     +AS +GG++IEE+AK  P+KI +  ++PL      +   +   + + 
Sbjct: 103 SVSNDRANRRPIIMASAEGGVEIEELAKTSPEKIIRYNVNPLKEFLPYEAREIARKMGVG 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     G +   LY  +   D  + EINPLI+  +G L   D+K+  +++AL+RH D+ 
Sbjct: 163 SELISPLGSIIWKLYNVYDKYDAEVAEINPLILTDDG-LIAADAKLEIENDALFRHQDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     ++   KQ + +++ LDG+I  + NGAGL +  MD++ L+GG PA FLD+G
Sbjct: 222 ----------KQNRFKQKDFAFVKLDGDIAVIGNGAGLTLTGMDMVTLFGGKPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  A  ++ +   VK + +N+ GGI R D + +G+++A++  K ++ +V+RL 
Sbjct: 272 GGASEETINKALSLVLNYPPVKVVFLNVLGGITRADDVARGVIAALEANKWDVNIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N + G RL  E+G+       L++AA+K V  
Sbjct: 332 GTNEEEGQRLFDEAGIPYEI--SLEEAAKKAVEM 363


>gi|239927749|ref|ZP_04684702.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291436089|ref|ZP_06575479.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
 gi|291338984|gb|EFE65940.1| succinyl-CoA synthetase subunit beta [Streptomyces ghanaensis ATCC
           14672]
          Length = 376

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 131/386 (33%), Positives = 202/386 (52%), Gaps = 23/386 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  ++ + V +  V  S   A    + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARQLFAEHGIVVPRAEVTDSPKRAREIARRLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGMDI-------KGHTVGTVMLAQPVDIAEEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    IAS QGG +IEEVA   P+ + ++ +DP  GVTS   A + +   L 
Sbjct: 103 SYVLDRAAGRFLAIASAQGGTEIEEVAATRPEAVARVPVDPAEGVTSATAARIAEAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L++    +D  L+E+NPL+   +GR+  LD K++ DDNA +RH    
Sbjct: 163 P----QTVDVLVRLWEVLTREDALLVEVNPLVRTGDGRIMALDGKVTLDDNARFRHAPWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D ++ D  E  A    L Y+ LDG +G + NGAGL M+T+D +   G  PANFLD+G
Sbjct: 219 G-EDSADADPLEAAAAAKGLHYVKLDGEVGVIGNGAGLVMSTLDAVAGCGARPANFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    ++ SD +V+ +L+N+FGGI  CD +  GI+ A+  V+   PLV+RL+
Sbjct: 278 GGASAQVMADGLSVVLSDPAVRSVLVNVFGGITACDAVADGIVRALDAVRPTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVITAIDLDD 386
           G N   G  ++      ++      D
Sbjct: 338 GNNAARGQAVLEARAHPLVEQATTMD 363


>gi|256810426|ref|YP_003127795.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus fervens
           AG86]
 gi|256793626|gb|ACV24295.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus fervens
           AG86]
          Length = 365

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 131/395 (33%), Positives = 207/395 (52%), Gaps = 31/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++Y +PV +  +IS      +          V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKNIFKEYGIPVPESFLISKEDDLSNIDID---KEVVLKAQVLVGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   S+ +  I    E+    +        G +V  + VE+   I +E Y+
Sbjct: 55  -------GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S++VDR +     I ST+GG+DIEE+A+  P+KI K  +D            +    ++ 
Sbjct: 101 SIIVDRDAKKPLIIFSTKGGVDIEEIAEKEPEKIVKYHVDVKKPFLPYVARWIVKEAKVP 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   LYK F D D +++EINPL+I K+  +   D+ I  DD+A +RH    
Sbjct: 161 SEEIGKVADIIYKLYKIFKDWDATMVEINPLVITKDKNVYAADAVIHLDDDAAFRHR--- 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 EE       ++   +Y+ LDG+I  + NGAGL +A+MD+I   G  PA FLD+G
Sbjct: 218 -----YEEFEEFKNKEKLPFAYVELDGDIAVIGNGAGLTLASMDVINNLGRKPACFLDIG 272

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD + V  A + +  + +VKGI INI GGI RCD + KGI+  +KE   NI   +R+ 
Sbjct: 273 GGADAETVKLALRKVLENKNVKGIFINILGGITRCDEVAKGIVEVLKE-HPNIKFAVRMM 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N DIG +++ E G+   T   +++A +K++  +
Sbjct: 332 GTNEDIGRKVLEEHGIPYET--SMEEAGKKLIELL 364


>gi|332676154|gb|AEE72970.1| succinyl-CoA ligase [ADP-forming] subunit beta [Propionibacterium
           acnes 266]
          Length = 375

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 201/387 (51%), Gaps = 26/387 (6%)

Query: 18  PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLK 77
           PV +G+V  +   A  A   L  P+  VK+Q+  GGRGK           GGV++  S  
Sbjct: 2   PVLRGIVAETPEQASEAAAKLGTPVVAVKAQVKVGGRGKA----------GGVKIAKSPA 51

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
                   ILG  +        G  V+ V V +GADI  E Y S+L+DR       + S 
Sbjct: 52  EAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSR 104

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA 197
           +GGMDIE +AK+ P+ + K+ +DP+ GV       +          +         L++ 
Sbjct: 105 EGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWET 164

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQ 257
           + D+D +L+E+NP+I   +GR+  +D K++ D+NA +R  D   L D +  D  E+ A +
Sbjct: 165 YRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHAGLVDRATTDPLELRAGE 224

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG------APANFLDVGGGADQDKVAAA 311
             L+Y+ LDGN+G + NGAGL M+T+D +   G       APANFLD+GGGA  + +A  
Sbjct: 225 LGLNYVKLDGNVGVIGNGAGLVMSTLDCVAYAGENFPGSPAPANFLDIGGGASAEIMANG 284

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--IPLVMRLEGANVDIGNR 369
             +I SD  V+ + +N+FGGI  CD +  GI  A++++      PLV+RL+G  V  G +
Sbjct: 285 LDLIMSDEQVRSVFVNVFGGITACDQVALGIKGALEKLGDKAVKPLVVRLDGNAVAEGRK 344

Query: 370 LIAESGLNVIT-AIDLDDAAQKIVHAV 395
           ++ E    ++T    +D+AA K     
Sbjct: 345 ILEEFNHPLVTMVSTMDEAASKAAELA 371


>gi|315427977|dbj|BAJ49567.1| succinyl-CoA synthetase beta subunit [Candidatus Caldiarchaeum
           subterraneum]
          Length = 374

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/384 (35%), Positives = 217/384 (56%), Gaps = 23/384 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E++ + L R+Y +P+   VV+ S   A  A + L G   VVK+Q+   GRGK    
Sbjct: 2   MKLYEFEGRELFRRYGIPLNNYVVVRSAEEARRAAEALGG-RTVVKAQVLVAGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +++  +    ++L S +        G RV  + V +  ++++ELYL
Sbjct: 58  -------GGVKVAENVEEAVMLAVKMLRSEI-------KGERVESLVVTEYTEVVKELYL 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       IAS +GG++IEE+A+  P  + K  ++PL+G+    V  +   ++L 
Sbjct: 104 GIIVDRFKRAPVVIASAEGGVEIEELARTSPGHVLKTEVNPLLGLADYQVRKIISFMKLD 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY+ F + D  L EINPL+I  + RL  LDSKI  DDNAL+R  +  
Sbjct: 164 QKLAQQAAAILRGLYRLFVENDCELAEINPLVITPDNRLVALDSKIIVDDNALFRRGEFS 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                +  ++   EA++   + + LDG+IG + NGAGL MATMD++KL GG+PANFLDVG
Sbjct: 224 RPESGTGLEA---EARRLGFAAVELDGDIGIIGNGAGLTMATMDMVKLKGGSPANFLDVG 280

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +D V  A +++ +   VK + +NI GGI RCD + +G++SA K V     +V+R+ 
Sbjct: 281 GGASEDVVEKAARLLLTHPRVKVVFVNILGGITRCDEVARGLVSAYKSVGAGKKIVVRMM 340

Query: 361 GANVDIGNRLIAESGLNVITAIDL 384
           G N + G R++ E+G  +     +
Sbjct: 341 GTNEEEGKRILIENG--IYPLDSM 362


>gi|148642984|ref|YP_001273497.1| succinyl-CoA synthetase, beta subunit, SucC [Methanobrevibacter
           smithii ATCC 35061]
 gi|148552001|gb|ABQ87129.1| succinyl-CoA synthetase, beta subunit, SucC [Methanobrevibacter
           smithii ATCC 35061]
          Length = 371

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/394 (30%), Positives = 206/394 (52%), Gaps = 31/394 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY AK +  +  +P+ +G V +S   A S    +  P+ + KSQ+  GGRGK    
Sbjct: 1   MKFFEYMAKRIFNEEGIPILEGHVANSAEEATSIASDMGVPVAI-KSQVLVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +          ++G+T+        G RV+ + +E  A+I++E +L
Sbjct: 57  -------GGIKFADNSGEAYKVADSLIGNTI-------NGERVHQLLIEKKANIIKEFFL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     + S +GG++IE +AK  P+KI K   +PLI     +   +   + + 
Sbjct: 103 SISIDRANKKPVIMVSNEGGVEIENLAKTNPEKIIKYHPNPLIEFLPYESREIARKMGVP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +     GD+   LYK F   D    EINPL++   G L   D+K   ++++LYRH D+ 
Sbjct: 163 SELISPMGDVIYKLYKLFEKYDAETAEINPLVLTDEG-LIAADAKFVVENDSLYRHPDLV 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +L             K+  + ++ LDG+I  + NGAGL +  MD+IK +GG PA FLD+G
Sbjct: 222 KL----------ARYKKKAVDFVKLDGDIAVIGNGAGLTLTGMDMIKFHGGEPATFLDIG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ +  +  I+ +   VK + +N+ GGI + D +  G++ A+KE K  + +V+RL 
Sbjct: 272 GGASEESIKKSLNIVLNYEPVKVVFLNVLGGITKADDVAHGVVDAIKESKSLVSIVIRLT 331

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G N + G R++ E+G+       ++ AA+K V  
Sbjct: 332 GTNEEEGQRILEEAGIPYEI--SMEKAAKKAVEL 363


>gi|159121964|gb|EDP47087.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
           fumigatus A1163]
          Length = 394

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 129/350 (36%), Positives = 201/350 (57%), Gaps = 8/350 (2%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+KSQI AGGRGKG   ++ +D KGG+R+ ++ +    +   +LG  L T+QT P G  V
Sbjct: 47  VLKSQILAGGRGKG---KMSSDGKGGIRIVATPEQAFQNASRMLGHYLATQQTPPHGLLV 103

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             +Y+    D+ +E YL+L  DR       + S QGG++IE        K+ +   +   
Sbjct: 104 KKLYIYKAVDVEQEFYLALTFDRERYSPVILISDQGGVNIES----NQDKLHRFWFNLSR 159

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+T E +A +        +       +   + K F ++D  LLE+NPL+    G    LD
Sbjct: 160 GITGETMAGIQKQSCFTDKEMPTIESIIRQMIKLFEERDAILLELNPLVRTPEGSFVCLD 219

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +K  FD+ A +R  ++    +       E EA+ H L YI L+G+IG +VNGAGLAMAT 
Sbjct: 220 AKFEFDNAAQFRQPEVFSKEERMPGFEDEYEAQMHGLVYIRLNGHIGNIVNGAGLAMATN 279

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           D+I L+GG  ANFLD+GG A  + +  AF+I++ D  V+GI +NIFGGI+RCD++ + I+
Sbjct: 280 DLINLHGGKCANFLDIGGKATTETLLKAFEILSRDQQVRGIFVNIFGGIVRCDMIAESII 339

Query: 344 SAVKEV-KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
            A   +    +P+V+RL+G N D   + ++ S L++ T  DL+ AA++I+
Sbjct: 340 QAAHTLGGFRVPVVVRLQGTNCDAAMKRLSTSELDISTETDLEKAAKRII 389


>gi|154487341|ref|ZP_02028748.1| hypothetical protein BIFADO_01191 [Bifidobacterium adolescentis
           L2-32]
 gi|154083859|gb|EDN82904.1| hypothetical protein BIFADO_01191 [Bifidobacterium adolescentis
           L2-32]
          Length = 395

 Score =  335 bits (859), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 124/399 (31%), Positives = 212/399 (53%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAIFAQNSHEVAEAADQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKTRDESILASEDILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALDDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR------LRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKSLCALDAKISLDDNASF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L G++G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFTDPIHVDPYEQKAREHGLHYVHLKGSVGVIGNGAGLVMSSLDAVSGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + ++ + +I+ SD  V+ +LIN++GGI  C+ + KGIL A+ E
Sbjct: 283 TNVKPANFLDIGGGASAEVMSNSLEIVLSDPQVESVLINVYGGITSCEQVAKGILEALDE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDD 386
           +  + P+V+R +G     G  ++A++G  N+  A  +++
Sbjct: 343 LGSSKPIVVRFDGNAAAEGLNILAQAGRANLHVAQTMEE 381


>gi|196020149|ref|XP_002119095.1| hypothetical protein TRIADDRAFT_35139 [Trichoplax adhaerens]
 gi|190576979|gb|EDV18418.1| hypothetical protein TRIADDRAFT_35139 [Trichoplax adhaerens]
          Length = 277

 Score =  334 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 150/276 (54%), Positives = 207/276 (75%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +S+++DR +  +   AST+GGM+IEEVAK+ P+KI    +D  IG+ +  +A L   + L
Sbjct: 1   ISVVLDRDNNCITIAASTEGGMEIEEVAKESPEKIITAQVDFTIGLQNFHIAKLGFGMGL 60

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                     +   LYK+F + D S +EINPLI  ++ +   LD+K +FDDNALY+H DI
Sbjct: 61  DKVQLKSFAKVVRALYKSFVETDASQIEINPLIETEDSKFIPLDAKFNFDDNALYKHPDI 120

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
           + +RD+ EED +E+EAK+++LSY+ +DG+IGCMVNGAGLAMATMDIIKLYG  PANFLDV
Sbjct: 121 EAMRDIHEEDPQEVEAKKYDLSYVKMDGSIGCMVNGAGLAMATMDIIKLYGKEPANFLDV 180

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  +KV  AFKII SDS+VKGIL+NIFGGIM+CD++  GI++A KEV+IN+P+V+RL
Sbjct: 181 GGGATTEKVTEAFKIILSDSNVKGILVNIFGGIMKCDIIANGIVTAAKEVQINVPVVVRL 240

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           EG N ++G +++ ESGL +  A DL+DAA+KIV+ V
Sbjct: 241 EGTNAEMGKKILQESGLKLEAANDLEDAAKKIVNVV 276


>gi|326334136|ref|ZP_08200363.1| succinyl-CoA synthetase, beta subunit [Nocardioidaceae bacterium
           Broad-1]
 gi|325948112|gb|EGD40225.1| succinyl-CoA synthetase, beta subunit [Nocardioidaceae bacterium
           Broad-1]
          Length = 387

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 136/404 (33%), Positives = 209/404 (51%), Gaps = 28/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+ V V +GVV+ +   A  A + +     VVK+Q+          K
Sbjct: 1   MDLMEYQAKKLFAKHGVAVTEGVVVETAEEARKAAEEIG--FCVVKAQV----------K 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +          ILG  +        G +VN V +      + E Y 
Sbjct: 49  AGGRGKAGGVKLAKTADEAFEHASNILGMEI-------KGLKVNRVLITPATPPVEEYYF 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR++     IAS +GG++IEEVAK  P  + ++ IDP  GV       +       
Sbjct: 102 SFLLDRSNRQYLCIASVEGGVEIEEVAKTNPDAVKQIGIDPGKGVDEAKAREIATECGFP 161

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-YRHLDI 239
                    +  +LY  F ++D +L+E+NPL  ++  +L  LD K+S DDNA   RH D 
Sbjct: 162 EPVFEQAVSMIQSLYTVFTEEDATLVEVNPLARLEGDKLEALDGKVSLDDNASEVRHEDH 221

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APA 294
           ++     EED  E +AK   L+Y+ LDG +G + NGAGL M+T+D++   G       PA
Sbjct: 222 EQFVIRDEEDPLEAKAKDKGLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPA 281

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA+   +A    +I +D  VK + +N+FGGI  CD + KGI+ A+  +  +  
Sbjct: 282 NFLDIGGGANAQVMADGLDVILNDEQVKSVFVNVFGGITACDEVAKGIVGALDILGNEAT 341

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G NVD+G ++++E+   ++T    +D  A K     
Sbjct: 342 KPLVVRLDGNNVDLGRQILSEANHPLVTIVDTMDGGADKAAELA 385


>gi|227494730|ref|ZP_03925046.1| succinyl-CoA synthetase beta chain [Actinomyces coleocanis DSM
           15436]
 gi|226831730|gb|EEH64113.1| succinyl-CoA synthetase beta chain [Actinomyces coleocanis DSM
           15436]
          Length = 387

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/393 (35%), Positives = 219/393 (55%), Gaps = 23/393 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQA+ L   Y VPV KGVV ++   AE+A+  L  P+ VVK+Q+  GGRGK    
Sbjct: 1   MDLFEYQARDLFEAYAVPVLKGVVATTPAEAEAAVVELGTPVVVVKAQVKVGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  S         EILG  +        G  VN V V  GA I  E Y 
Sbjct: 58  -------GGVKLAKSPAEAAEKASEILGMDI-------KGHTVNKVMVAQGASIAEEYYF 103

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GGMDIE +AK+ P+ + K+ +D  +G+  E    +       
Sbjct: 104 SILLDRANRSHLAMCSKEGGMDIETLAKERPEALAKVHLDATVGINEEVATQILTAAGFT 163

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              +     +   L++ +  +D +L+E+NPL+ + +G +  LD K+S DDNA +RH    
Sbjct: 164 ADEQPALVPVLVKLWEVYAKEDATLVEVNPLVKVASGEIIALDGKVSLDDNAAFRHPQHA 223

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA----PANF 296
           EL+D+S ED  E +AK   L+Y+ L+G +G + NGAGL M+T+D++   G      PANF
Sbjct: 224 ELKDISAEDPLESKAKAAGLNYVRLEGEVGIIGNGAGLVMSTLDVVAYAGEKYGVHPANF 283

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KINIP 354
           LD+GGGA  + +A   +II  D  V+  L+N+FGGI  CD +  G++ A++ +      P
Sbjct: 284 LDIGGGASAEVMAKGLEIILGDEQVRSCLVNVFGGITACDQVAAGVIGALELLGDNATKP 343

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +V+RL+G  V+ G +++ E+   ++T ++  D 
Sbjct: 344 IVVRLDGNKVEEGRQILMEANHPLVTMVETMDG 376


>gi|302348871|ref|YP_003816509.1| Succinyl-CoA synthetase beta chain [Acidilobus saccharovorans
           345-15]
 gi|302329283|gb|ADL19478.1| Succinyl-CoA synthetase beta chain [Acidilobus saccharovorans
           345-15]
          Length = 382

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 130/380 (34%), Positives = 210/380 (55%), Gaps = 22/380 (5%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAGGRGKGRFK 60
            + EY+AK ++RKY +   KGVV+        AI++    P   VK+Q+   GRGK    
Sbjct: 6   KLFEYEAKEIIRKYGIETPKGVVVREGDDIRKAIESSGLTPPLAVKAQVLVAGRGKA--- 62

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+++ +++   +S  +++  + +        G + + + +E       ELY 
Sbjct: 63  -------GGIKLVNNVDEAVSVSQQLFKTPI-------KGIKPSILLIEQAIKHDAELYA 108

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +++DR       + S  GGMD+EEVA+++P+ I K  +DP  G+ + +   L   L L 
Sbjct: 109 GIVLDRAERKPLVLVSKYGGMDLEEVAREHPEAIIKYYVDPYKGLRNYEARILGKQLGLT 168

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A     +    LY+AF D D  L E NPL ++ + ++  LD +I  DDN+L+RH +  
Sbjct: 169 GKALSSFENFLQALYRAFMDYDAELAESNPLALLPD-KVLPLDLRIIIDDNSLFRHTEYA 227

Query: 241 ELRDVS--EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
                   E   REI A++ +L+Y+ LDG++G + NGAGL M TMD++  +G  PA+FLD
Sbjct: 228 ATEKERLGELSEREIAAREKDLAYVELDGDVGVIGNGAGLTMTTMDLVYEFGMKPADFLD 287

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-IPLVM 357
           VGGGA+ + +  A + + SD  VK + INIFGGI R D + +GI+ A+K++     PLV+
Sbjct: 288 VGGGAEAEHIRDAVEFVMSDPKVKKVFINIFGGITRADEVARGIVMALKDLGNKAKPLVV 347

Query: 358 RLEGANVDIGNRLIAESGLN 377
           RL G N + G  ++ E G+ 
Sbjct: 348 RLTGTNEEQGREILKEVGIT 367


>gi|119025826|ref|YP_909671.1| succinyl-CoA synthetase beta chain [Bifidobacterium adolescentis
           ATCC 15703]
 gi|118765410|dbj|BAF39589.1| succinyl-CoA synthetase beta chain [Bifidobacterium adolescentis
           ATCC 15703]
          Length = 395

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 124/399 (31%), Positives = 211/399 (52%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAIFAQNSHEVAEAADQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKTRDESILASEDILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALDDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR------LRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKSLCALDAKISLDDNASF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L G++G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFTDPIYVDPYEQKAREHGLHYVHLKGSVGVIGNGAGLVMSSLDAVSGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + ++ +  I+ SD  V+ +LIN++GGI  C+ + KGIL A+ E
Sbjct: 283 TNVKPANFLDIGGGASAEVMSNSLGIVLSDPQVESVLINVYGGITSCEQVAKGILEALDE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDD 386
           +  + P+V+R +G     G  ++A++G  N+  A  +++
Sbjct: 343 LGSSKPIVVRFDGNAAAEGLNILAQAGRANLHVAQTMEE 381


>gi|290971634|ref|XP_002668592.1| predicted protein [Naegleria gruberi]
 gi|284082062|gb|EFC35848.1| predicted protein [Naegleria gruberi]
          Length = 366

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 127/291 (43%), Positives = 183/291 (62%), Gaps = 4/291 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-YVVKSQIHAGGRGKGRF 59
           +N+HEYQA+ L R Y++ V +G V++S    + A   L   + Y+VK+Q+ AGGRG+G+F
Sbjct: 30  LNLHEYQAQDLFRSYDISVPRGKVLTSATETKKACTELGNHVDYIVKAQVLAGGRGRGKF 89

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           K   +  KGGV+   S+      + ++LG  L+TKQTG  G   N VYV++     RELY
Sbjct: 90  K---SGLKGGVQKALSIGEAEDYVSKMLGQVLVTKQTGAEGKPCNKVYVQERLYARRELY 146

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++L+DR SG    I STQGGM IE+VA++ P++I  + I    G+       L   L  
Sbjct: 147 LAILLDRQSGGPVLIGSTQGGMAIEDVARESPEEIHTIPISVKEGLHKSQAEGLARKLGF 206

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           + +      D    LY  F   D  LLEINPLI   +G++   D+K++ DDNA +R  ++
Sbjct: 207 RDELLDQAVDQITKLYNLFMKTDSVLLEINPLIETADGKVICADAKVNIDDNAFFRQKEL 266

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
             L+D+++ED R++ A +++L+YI LDGNIGC+VNGAGLAMATMDIIKLYG
Sbjct: 267 FALKDITQEDPRDVRAAKYDLNYIGLDGNIGCIVNGAGLAMATMDIIKLYG 317


>gi|312142573|ref|YP_003994019.1| succinyl-CoA synthetase, beta subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311903224|gb|ADQ13665.1| succinyl-CoA synthetase, beta subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 393

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 141/411 (34%), Positives = 226/411 (54%), Gaps = 32/411 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIK------------TLPGPLYVVKSQ 48
           M + EY++  L   YN+P  KGVVI S+   ++  +             +     VVK+Q
Sbjct: 1   MKLLEYKSMELFYDYNIPSNKGVVIDSLADLDNTQQDDEPTRGSNVGAEIENYPVVVKAQ 60

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  GGRGK           GG++   + + V    +++LGS +        G  +  ++V
Sbjct: 61  VQTGGRGKA----------GGIKFADNAEEVKQISKDLLGSEI-------KGLEIKKLFV 103

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
            D  D+ +E YLS+ +DR +     I ST+GG+DIEE A + P+KI K+ I+P++G+ + 
Sbjct: 104 VDMIDVKKEWYLSITLDRKTKTPLLIFSTEGGVDIEETAHETPEKIAKIPINPMMGIKAY 163

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            +  L +  ++  +   +  +L  NLYK F + D  L EINPL+I +N  L  LD KI  
Sbjct: 164 MLRYLINYFDVDPKYLKELTELVENLYKLFREYDCLLAEINPLVITENEELLALDGKIDI 223

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDII 286
           DDN+L+RH DI + RD   ED++ IEA++++  YI +   GNIG + NG+G+ M++MD+I
Sbjct: 224 DDNSLFRHDDILKFRDELTEDAKVIEAREYDFLYIPIRDTGNIGVISNGSGMIMSSMDLI 283

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
              G      LD+GGGA  ++V  A KI+ S+  V+ +LINIFGGI RCD +  G+  A 
Sbjct: 284 SQRGMEVTCALDLGGGATAERVKEAIKIVLSNDDVEVLLINIFGGITRCDEIANGLKMAA 343

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
             V  +  +++R+EG N + G  +I      V++A  + +  +K+     G
Sbjct: 344 DAVG-DKKVIIRVEGTNKEAGLDIIHGMKDTVVSADSILEGVEKLYEHFSG 393


>gi|212715822|ref|ZP_03323950.1| hypothetical protein BIFCAT_00723 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661189|gb|EEB21764.1| hypothetical protein BIFCAT_00723 [Bifidobacterium catenulatum DSM
           16992]
          Length = 397

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 126/399 (31%), Positives = 210/399 (52%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K V   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAVFAQNSHEVAEAADQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I     IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKNRDEAILVSEGILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALEDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVNQAAQILLKMWQCFKDNDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D    D  E +A++H L Y+ L G++G + NGAGL M+++D I   G    
Sbjct: 223 RHDGWNRFADPVHVDPFEQKAREHGLHYVHLQGSVGVIGNGAGLVMSSLDAISGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +  + +I+ SD  V+ +L+N++GGI  C+ + KGIL A+ +
Sbjct: 283 TNVKPANFLDIGGGASAEVMCGSLEIVLSDPQVESVLVNVYGGITSCEQVAKGILEALDK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDD 386
           +  + PLV+R +G     G R++A++  +N+  A  +++
Sbjct: 343 LGSSKPLVVRFDGNAAAEGLRILAQANRVNLHVAQTMEE 381


>gi|307332148|ref|ZP_07611234.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
 gi|306882213|gb|EFN13313.1| succinyl-CoA synthetase, beta subunit [Streptomyces violaceusniger
           Tu 4113]
          Length = 374

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 203/387 (52%), Gaps = 23/387 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ LL++  V V +  V+ +  AA +A + L G + V+K+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELLQENGVLVPRAEVVDTAEAARAAAERLGGRV-VIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++     +     R ILG  +        G  V+ V V +  ++ RE+YL
Sbjct: 57  -------GGVKLADDPAAAERTARRILGMDI-------KGHTVHRVMVAEPVEVEREMYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
              +DR +G    IAS +GGM+IEEVA   P+ + ++ IDP  GVT    A +     L 
Sbjct: 103 GFTLDRAAGRFLAIASAEGGMEIEEVAAHRPEAVARIPIDPAEGVTEAKAAEIAAAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +       L+      D  L+EINPL++ ++G +  LD K++ DDNA +R     
Sbjct: 163 P----ETAGTIRRLWTVLTAYDALLVEINPLVVTRDGAIVALDGKVTLDDNASFRQPSWD 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  D    D  E  A    L Y+ LDG +G + NGAGL M+T+D++   G  PA+FLD+G
Sbjct: 219 DSGD-RARDPLEARAAAAGLGYVKLDGQVGVIGNGAGLVMSTLDVVAGCGARPADFLDIG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    ++  D  V+ +L+N+FGGI  CD +  GI+ A+  V +  PLV+RL+
Sbjct: 278 GGASAQVMADGLSLVLDDPEVRSVLVNVFGGITACDAVADGIVRALDTVPLTKPLVVRLD 337

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDA 387
           G N   G  ++ +    ++   D  D 
Sbjct: 338 GNNAARGRAILGQLAHPLVHQADTMDG 364


>gi|225352123|ref|ZP_03743146.1| hypothetical protein BIFPSEUDO_03738 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157370|gb|EEG70709.1| hypothetical protein BIFPSEUDO_03738 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 397

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/399 (31%), Positives = 212/399 (53%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +P  K V   + H    A + +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIPTPKAVFAQNSHEVAEAAEQIGYP-NVIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKLAKNRDEAILASEDILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+AK++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALEDFDIEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVNQAAQILLKMWQCFKENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L G++G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFADPVHVDPFEQKAREHGLHYVHLQGSVGVIGNGAGLVMSSLDAVSGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA  + +  + +I+ SD  V+ +LIN++GGI  C+ + KGIL A+ +
Sbjct: 283 TNVKPANFLDIGGGASAEVMCGSLEIVLSDPQVESVLINVYGGITSCEQVAKGILEALDK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDD 386
           +  + PLV+R +G     G  ++A++  +N+  A  +++
Sbjct: 343 LGSSKPLVVRFDGNAAAEGLHILAQADRVNLHVAQTMEE 381


>gi|261337762|ref|ZP_05965646.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bifidobacterium
           gallicum DSM 20093]
 gi|270277215|gb|EFA23069.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bifidobacterium
           gallicum DSM 20093]
          Length = 399

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 121/409 (29%), Positives = 209/409 (51%), Gaps = 29/409 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL++  +P  + +   +V     A+ ++  P  V+K Q   G RG+    
Sbjct: 1   MDLYEYQARELLQEAGIPTPEAIYARNVEEVVEALPSMGLP-AVIKGQAKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VR+  +++   +    IL  ++        G  +N V V    DI  E Y+
Sbjct: 57  -------GAVRLVRTVEEAKAAAEHILPMSI-------QGHEINGVLVAQAKDIRNEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR++     +A++QGG ++E++A++ P  + +L I  L          +   +  +
Sbjct: 103 SISVDRSTRSFCVLATSQGGTEVEQIAQEQPDAVKRLHISKLEDFDQAAALDMAAQIGFE 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR----LRVLDSKISFDDNALYRH 236
                  GD+   +++ F   D +L+EINPL  + +      L  LD+K+S D NA +RH
Sbjct: 163 DADVAQAGDILYRMWQCFTTNDATLVEINPLANVADEDGNLTLCALDAKVSLDGNAAFRH 222

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA---- 292
              Q   D    D+ E  A+   + Y+ LDG +G + NGAGL M+++D +   G A    
Sbjct: 223 DGWQRFTDTRVADTLEARAQAAGMHYVHLDGQVGVIGNGAGLVMSSIDAVTFAGRAQGNG 282

Query: 293 --PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
              ANFLD+GGGA  + +  + + + +D  V+ + IN++GGI  C+ +  GIL A++E+ 
Sbjct: 283 ISAANFLDIGGGASAEAMCRSLETVLADPKVESVFINVYGGITSCEQVALGILQAIEELG 342

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
           ++ PLV+R +G     G R++ ES L+ V  A  ++ AA + V     V
Sbjct: 343 VSKPLVVRFDGNAASEGLRILRESKLDTVHVAETMEQAATQAVSLAASV 391


>gi|323701754|ref|ZP_08113425.1| succinyl-CoA synthetase, beta subunit [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533290|gb|EGB23158.1| succinyl-CoA synthetase, beta subunit [Desulfotomaculum nigrificans
           DSM 574]
          Length = 379

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 124/397 (31%), Positives = 198/397 (49%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY  K + RK  +PV +G    +          L  P  VVKSQ+ +GGR K    
Sbjct: 1   MKLYEYMGKDIFRKEGIPVPRGQAFFNPTGVAEYAAGL--PAVVVKSQVLSGGRSKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  ++     +    +LG+ +           V  V VE+   I +E Y+
Sbjct: 56  -------GGIKFPATATDAAAAAEALLGTVI-------KDLSVQAVLVEEKLTIDKEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ VD        IAS  GG+DIEEV +    ++ K+ +D   G+       +   + L 
Sbjct: 102 AITVDGARRKPLVIASAYGGVDIEEVPEH---QLVKMHVDVHSGIQPYMGREVARRMGLP 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +Y  F   D  L+EINPL++  + +L   D+K + DD A +R  D  
Sbjct: 159 AGEAKQFADILVKMYTIFRKYDAELVEINPLVVSGD-KLVAADAKFNIDDEASFRWPDW- 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L  V E    E+ A +  +S++ LDG+I  M NGAG+ MAT+D++  +GG+P NF+D G
Sbjct: 217 -LPRVEERSQLELRATELGISFVELDGDIAVMANGAGITMATLDMLNHFGGSPRNFMDAG 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  +  A A +I+ S ++ + ILINIFGGI RCD + +      +   I +P+V+RL 
Sbjct: 276 GGASTEATAKALEILLS-TNPRAILINIFGGITRCDDVARAFAHVRETTGIPVPIVIRLV 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N   G  ++ + G++     ++D+A  K+V    G
Sbjct: 335 GTNEQAGIEVLQQQGMS--AYRNIDEAVVKVVELAAG 369


>gi|291456793|ref|ZP_06596183.1| succinyl-CoA synthetase, beta subunit [Bifidobacterium breve DSM
           20213]
 gi|291382070|gb|EFE89588.1| succinyl-CoA synthetase, beta subunit [Bifidobacterium breve DSM
           20213]
          Length = 400

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 124/399 (31%), Positives = 202/399 (50%), Gaps = 30/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPGAIFAQNSHEVAEAADKIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L     E    +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDALDDFDLEAATKMAASIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  + +       +L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWQCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D    D  E  A++H L Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWARFVDPIVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGEEQR 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +A + +I+ SD  V+ + IN++GGI  C  +  GIL AV +
Sbjct: 283 SGIKPANFLDIGGGASATVMAESLEIVLSDPQVESVFINVYGGITSCVEVANGILEAVAK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  + P+V+R +G     G  ++AE+    I   +  + 
Sbjct: 343 LGGSKPIVVRFDGNAAAEGLHILAEANNPNIHVSETMEG 381


>gi|311064391|ref|YP_003971116.1| succinyl-CoA synthetase subunit beta [Bifidobacterium bifidum
           PRL2010]
 gi|310866710|gb|ADP36079.1| SucC Succinyl-CoA synthetase beta chain [Bifidobacterium bifidum
           PRL2010]
          Length = 401

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 124/398 (31%), Positives = 202/398 (50%), Gaps = 30/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P  + V   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQHIPTPRAVFAQNSHEVAEAADAIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I     IL  T+        G +VN V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILLSESILPMTI-------HGHKVNGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L I+ L     E    +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPESVKRLHINALGDFDMEAAKRMAGQIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR------LRVLDSKISFDDNALY 234
                   ++   +++ F D D +L+EINPL  + +        L  LD+KIS D NA +
Sbjct: 163 HADLDQAANILLRMWQCFKDNDATLVEINPLAKIGDPDDEASKSLCALDAKISLDGNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-- 292
           RH       D  + D  E  A +H L Y+ LDG +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWTRFDDPMQADPFEAAAAEHGLHYVHLDGQVGVIGNGAGLVMSSLDAVWDAGKKQG 282

Query: 293 ----PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    ++ +  I+ SD  V+ + IN++GGI  C+ + KGIL A +E
Sbjct: 283 TNVTPANFLDIGGGASAAVMSDSLSIVLSDPQVESVFINVYGGITSCEQVAKGILQAFEE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  + PLV+R +G     G +++A +    +      +
Sbjct: 343 LHTSKPLVVRFDGNAAAEGLQILAAANNPNLHVEGTME 380


>gi|224283108|ref|ZP_03646430.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287476|ref|YP_003938734.1| Succinyl-CoA synthetase beta chain [Bifidobacterium bifidum S17]
 gi|313140257|ref|ZP_07802450.1| succinyl-CoA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|309251412|gb|ADO53160.1| Succinyl-CoA synthetase beta chain [Bifidobacterium bifidum S17]
 gi|313132767|gb|EFR50384.1| succinyl-CoA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 401

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 124/398 (31%), Positives = 202/398 (50%), Gaps = 30/398 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P  + V   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQHIPTPRAVFAQNSHEVAEAADAIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I     IL  T+        G +VN V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILLSESILPMTI-------HGHKVNGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L I+ L     E    +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPESVKRLHINALGDFDMEAAKRMAGQIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR------LRVLDSKISFDDNALY 234
                   ++   +++ F D D +L+EINPL  + +        L  LD+KIS D NA +
Sbjct: 163 HADLDQAANILLRMWQCFKDNDATLVEINPLAKIGDPDDEASKSLCALDAKISLDGNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-- 292
           RH       D  + D  E  A +H L Y+ LDG +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWARFDDPMQADPFEAAAAEHGLHYVHLDGQVGVIGNGAGLVMSSLDAVWDAGKEQG 282

Query: 293 ----PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    ++ +  I+ SD  V+ + IN++GGI  C+ + KGIL A +E
Sbjct: 283 TNVTPANFLDIGGGASAAVMSDSLSIVLSDPQVESVFINVYGGITSCEQVAKGILQAFEE 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +  + PLV+R +G     G +++A +    +      +
Sbjct: 343 LHTSKPLVVRFDGNAAAEGLQILAAANNPNLHVEGTME 380


>gi|171742918|ref|ZP_02918725.1| hypothetical protein BIFDEN_02035 [Bifidobacterium dentium ATCC
           27678]
 gi|306822729|ref|ZP_07456107.1| succinyl-CoA synthetase [Bifidobacterium dentium ATCC 27679]
 gi|309800964|ref|ZP_07695096.1| succinate-CoA ligase, beta subunit [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278532|gb|EDT46193.1| hypothetical protein BIFDEN_02035 [Bifidobacterium dentium ATCC
           27678]
 gi|304554274|gb|EFM42183.1| succinyl-CoA synthetase [Bifidobacterium dentium ATCC 27679]
 gi|308222500|gb|EFO78780.1| succinate-CoA ligase, beta subunit [Bifidobacterium dentium
           JCVIHMP022]
          Length = 397

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 122/399 (30%), Positives = 209/399 (52%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +   K V   + H    A + +  P  VVK+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIATPKAVFAQNSHEVAQAAEGIGYPC-VVKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVRLAKTRDEAILASEDILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+A+++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAREHPESVKRLHIDALEDFDIEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L+G++G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFADPVHVDPFEQKAREHGLHYVHLNGSVGVIGNGAGLVMSSLDAVSGAGEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +  + +I+ SD  V+ +L+N++GGI  C+ + +GIL A+ +
Sbjct: 283 TNVKPANFLDIGGGASAQVMCDSLEIVLSDPQVESVLVNVYGGITSCEQVAEGILEALDK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDD 386
           +  + PLV+R +G     G  ++A +   N+  A  +++
Sbjct: 343 LGSSKPLVVRFDGNAAAEGLSILARADRANLHVAQTMEE 381


>gi|261884695|ref|ZP_06008734.1| succinyl-CoA synthetase subunit beta [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 301

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 134/293 (45%), Positives = 184/293 (62%), Gaps = 4/293 (1%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             +Y+E G +I +E YLSL  DR +  +A IAS  GGM+IEEV      KI  + IDP I
Sbjct: 10  RKLYIEKGTNIDKEYYLSLTFDRINECIAVIASADGGMNIEEVDH---DKIITIRIDPQI 66

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G+      ++ D L L     +    L   LY+ +   D +L+EINPL++ K   L  LD
Sbjct: 67  GLRDFHSLAIADFLNLDKDLSVKLHVLLSKLYRLYWQTDSNLVEINPLVLTKENDLIPLD 126

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +K+ FDD+AL+R   I  +RD+ EE+  E++AK + LSY+ LDGNIGCMVNGAGLAM TM
Sbjct: 127 AKMGFDDSALFRQEQIAIMRDIDEEEPSELDAKTYGLSYVKLDGNIGCMVNGAGLAMGTM 186

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           D I   GG PANFLDVGGGA+   VA AF+II  D +VK I +NIFGGI+RCD +  GIL
Sbjct: 187 DTINGVGGKPANFLDVGGGANPQTVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIANGIL 246

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAV 395
            A K  K+ +P+++RL+G N      ++ ++ + N+I+A DL+  A+  V   
Sbjct: 247 EATKLTKVEVPVIVRLDGTNAKEAAEILKQANITNIISAPDLESGAKMSVELA 299


>gi|296109065|ref|YP_003616014.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus infernus
           ME]
 gi|295433879|gb|ADG13050.1| succinyl-CoA synthetase, beta subunit [Methanocaldococcus infernus
           ME]
          Length = 362

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 117/396 (29%), Positives = 205/396 (51%), Gaps = 37/396 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + +KY + V K  +I      E           V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKKIFKKYGIDVPKSFLIKKGDDVELK----EFDEAVLKAQVLVGGRGKAGGI 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                      + ++ ++    + E+    +        G +V+ + VE+   I +E YL
Sbjct: 57  -----------LFTNKENFKEKVEELFNKEI-------KGEKVDKILVEEKLRIKKEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR       I S++GG+DIEE+A+ +P+KI K  +D            +     ++
Sbjct: 99  SITIDRNEKKPVIIFSSEGGVDIEEIAEKHPEKIIKYYVDIKKPFLPYIGREIAKKAGVE 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               I  GD+   +YK F + D +L+EINPL+I ++ ++   D+ I  DD++ +R  D  
Sbjct: 159 ----IKVGDIIYKVYKIFKELDATLVEINPLVITEDNKIYAADAVIHLDDDSYFRQ-DFS 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           E  +   +++          +Y+ LDG++  + NGAGL +A+MD I  +G  PA FLD+G
Sbjct: 214 EFEEYKNKENLP-------FAYVELDGDVAVIGNGAGLTLASMDTIYDFGLKPACFLDIG 266

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD++    A K +  +  VKGI IN+ GGI RCD + K I+  +K+   NI   +RL 
Sbjct: 267 GGADEETTKLALKKVLENKKVKGIFINVLGGITRCDEVAKAIVEILKD-NPNIKFSVRLT 325

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N ++G +++ E+ +    +  + +A +++  +++
Sbjct: 326 GTNEELGRKILEEANIPY--STSMYEAGKRLAESLR 359


>gi|159905944|ref|YP_001549606.1| succinyl-CoA synthetase subunit beta [Methanococcus maripaludis C6]
 gi|159887437|gb|ABX02374.1| succinyl-CoA synthetase, beta subunit [Methanococcus maripaludis
           C6]
          Length = 362

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 128/395 (32%), Positives = 210/395 (53%), Gaps = 35/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++  +P+ K  +          + ++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENGIPIPKNKLTC------GKVDSIDYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L      I  ++G T+        G  V  V +E+   I +E Y+
Sbjct: 51  -------GGILFADNLDDANEKIESLIGKTV-------KGELVEKVLLEEQIKIAKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++V R       I ST+GG+DIEEVA   P+KI KL ++P           +     + 
Sbjct: 97  GVVVSRNEKNNVVIFSTEGGVDIEEVASKTPKKIIKLQLEPGKEFLPYLAREMLKKAGIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +YKAF D D  L EINPL+  ++G++   D+ ++ DD+A +RH    
Sbjct: 157 SAEIPKVADVLCKVYKAFKDMDGILAEINPLVFTEDGKIIAADAVLNIDDDAYFRHK--- 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D  EE +++   ++   +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA FLDVG
Sbjct: 214 --YDKFEEFNKQ---EKSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACFLDVG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG++++ V  A    TS  +VKG  INI GGI RCD +  GI+  +KE   N+   +R+ 
Sbjct: 269 GGSNRETVKKALLKATSRKNVKGAFINILGGITRCDEVSLGIVDVLKE-NPNLKFAVRMM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G ++++E+G+N      ++ AA+ ++  +
Sbjct: 328 GTNEEEGRKILSENGVNFE--NSMEGAAKALMELI 360


>gi|86211695|gb|ABC87499.1| succinyl-CoA synthetase beta chain [Streptomyces sp. NRRL 30748]
          Length = 372

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 126/378 (33%), Positives = 205/378 (54%), Gaps = 28/378 (7%)

Query: 20  AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSV 79
             G VI +  AA    + L G   VVK+Q+  GGRGK           GGV++ S     
Sbjct: 2   LAGEVIDTPGAAREVAERLGG-RAVVKAQVKTGGRGKA----------GGVKLASDPDDA 50

Query: 80  ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQG 139
           +    +ILG  +        G  V+ V + + ADI  E Y+S L+DRT+     +AS +G
Sbjct: 51  VEKAGQILGMDI-------KGHTVHKVMLAETADIKEEYYVSFLLDRTNRTFLAMASVEG 103

Query: 140 GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
           G++IE VA+  P+ + K+ +D + GVT E  A +    +   +       +   L+  F 
Sbjct: 104 GVEIEVVAEQNPEALAKIPVDAIEGVTEEKAAEIVAAAKFPAEIADQVVAVLQKLWTVFI 163

Query: 200 DKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
            +D  L+E+NPL+  ++G++  LD K+S D+NA +R  + + L D +  +  E  AK   
Sbjct: 164 KEDALLVEVNPLVKTEDGKVIALDGKVSLDENAAFRQPEHEALEDKAAANPLEAAAKAKG 223

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-----APANFLDVGGGADQDKVAAAFKI 314
           L+Y+ LDG +G + NGAGL M+T+D++   G       PANFLD+GGGA  + +A   +I
Sbjct: 224 LNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGNVKPANFLDIGGGASAEVMANGLEI 283

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNR 369
           I  D  VK + +N+FGGI  CD +  GI+ A++ +K     ++ PLV+RL+G N ++G +
Sbjct: 284 ILGDPDVKSVFVNVFGGITACDAVANGIVQALELLKSKGEDVSKPLVVRLDGNNAELGRK 343

Query: 370 LIAESGLNVITAIDLDDA 387
           ++ ++   ++  +D  D 
Sbjct: 344 ILTDANHPLVQQVDTMDG 361


>gi|23335120|ref|ZP_00120358.1| COG0045: Succinyl-CoA synthetase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|23465310|ref|NP_695913.1| succinyl-CoA synthetase beta chain [Bifidobacterium longum NCC2705]
 gi|189439319|ref|YP_001954400.1| succinyl-CoA synthetase subunit beta [Bifidobacterium longum
           DJO10A]
 gi|227547254|ref|ZP_03977303.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239621478|ref|ZP_04664509.1| succinyl-CoA synthetase beta chain protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|312132693|ref|YP_004000032.1| succ [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483242|ref|ZP_07942237.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689204|ref|YP_004208938.1| succinyl-CoA synthase subunit beta [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691270|ref|YP_004220840.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|23325949|gb|AAN24549.1| succinyl-CoA synthetase beta chain [Bifidobacterium longum NCC2705]
 gi|189427754|gb|ACD97902.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium longum
           DJO10A]
 gi|227212213|gb|EEI80109.1| succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239515939|gb|EEQ55806.1| succinyl-CoA synthetase beta chain protein [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|291516878|emb|CBK70494.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bifidobacterium
           longum subsp. longum F8]
 gi|311773651|gb|ADQ03139.1| SucC [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915311|gb|EFV36738.1| succinate-CoA ligase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456126|dbj|BAJ66748.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320460540|dbj|BAJ71160.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 400

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 122/399 (30%), Positives = 200/399 (50%), Gaps = 30/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPDAIFAQNSHEVAEAADKIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L          +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDALGDFDLAAATEMAQSIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  + +       +L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDNASF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D    D  E  A++H L Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWARFVDPIVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGEEQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +A + +I+ SD  V+ + IN++GGI  C  +  GIL AV +
Sbjct: 283 TNIKPANFLDIGGGASAAVMAESLEIVLSDPQVESVFINVYGGITSCVEVANGILEAVAK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  + P+V+R +G     G  ++A +    I   +  + 
Sbjct: 343 LGGSKPIVVRFDGNAAAEGLHILASANNPNIHVSETMEG 381


>gi|257077170|ref|ZP_05571531.1| succinyl-CoA synthetase subunit beta [Ferroplasma acidarmanus fer1]
          Length = 366

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 130/391 (33%), Positives = 209/391 (53%), Gaps = 32/391 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EY  K + +KY +PV  G VI +V      ++    P+ + KSQI +G RGK    
Sbjct: 1   MNLYEYMGKEIFKKYGIPVPDGYVIENVGE----LRKFEYPVAI-KSQILSGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +   +     ++L ST+           V  + +E   +I +E+YL
Sbjct: 53  -------GGIKFARNSNELSEFSDKLLNSTINN-------LTVKKLLIERMLNIKKEIYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR +     I S  GGM+IE V ++    I K+ IDP++G +          +   
Sbjct: 99  SITLDRATKEPVIILSADGGMEIESVPEEN---IHKIHIDPMVGYSDYIAREALSYI--P 153

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            + +    +L  +LYKAF  +D  L EINPL+I     +   DSK+  DDNALYRH D  
Sbjct: 154 VENKKQFSNLLSSLYKAFVGEDALLTEINPLVIDAENNIIAGDSKVIIDDNALYRHKDY- 212

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +    ++ + E EA   + ++I +DG+IG + NGAGL MATMD + L+   P NFLD+G
Sbjct: 213 -MITDPDKTALENEAASKSFTFIEMDGDIGVIANGAGLTMATMDSLTLHKLKPRNFLDLG 271

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G  + + V  AF  +   +  K I +NIFGG+ + D +  GI+S+ K+  I  P+V+RL 
Sbjct: 272 GTDNIEIVEDAFSFVMR-ARPKLIFVNIFGGVTKADTVANGIVSSKKKFDIKQPIVVRLS 330

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G + + G +++ ESG+   T  ++ DA +++
Sbjct: 331 GVHEEEGQKILLESGIKAFT--NMTDAVKEL 359


>gi|283456060|ref|YP_003360624.1| succinyl-CoA synthetase subunit beta [Bifidobacterium dentium Bd1]
 gi|283102694|gb|ADB09800.1| Succinyl-CoA synthetase beta chain [Bifidobacterium dentium Bd1]
          Length = 397

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 121/399 (30%), Positives = 208/399 (52%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL +  +   K V   + H    A + +  P  VVK+Q+  G RG+    
Sbjct: 1   MDLYEYQARELLEEQGIATPKAVFAQNSHEVAQAAEGIGYPC-VVKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I    +IL  T+          +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVRLAKTRDEAILASEDILPMTI-------HKHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EE+A+++P+ + +L ID L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEIAREHPESVKRLHIDALEDFDIEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F + D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E +A++H L Y+ L+G++G + NGAGL M+++D +        
Sbjct: 223 RHDGWKRFADPVHVDPFEQKAREHGLHYVHLNGSVGVIGNGAGLVMSSLDAVSGASEDQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +  + +I+ SD  V+ +L+N++GGI  C+ + +GIL A+ +
Sbjct: 283 TNVKPANFLDIGGGASAQVMCDSLEIVLSDPQVESVLVNVYGGITSCEQVAEGILEALDK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESG-LNVITAIDLDD 386
           +  + PLV+R +G     G  ++A +   N+  A  +++
Sbjct: 343 LGSSKPLVVRFDGNAAAEGLSILARADRANLHVAQTMEE 381


>gi|296454191|ref|YP_003661334.1| succinate--CoA ligase [Bifidobacterium longum subsp. longum JDM301]
 gi|296183622|gb|ADH00504.1| Succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 400

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 122/399 (30%), Positives = 201/399 (50%), Gaps = 30/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPDAIFAQNSHEVAEAADKIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAILESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L          +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDALGDFDLAAATEMAQSIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  + +       +L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDNASF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH       D+   D  E  A++H L Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWARFVDLIVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGEEQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +A + +I+ SD  V+ + IN++GGI  C  +  GIL AV +
Sbjct: 283 TNIKPANFLDIGGGASAAVMAESLEIVLSDPQVESVFINVYGGITSCVEVANGILEAVAK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +  + P+V+R +G     G  ++A +    I   +  + 
Sbjct: 343 LGGSKPIVVRFDGNAAAEGLHILASANNPNIHVSETMEG 381


>gi|297190797|ref|ZP_06908195.1| succinyl-CoA synthetase subunit beta 2 [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722578|gb|EDY66486.1| succinyl-CoA synthetase subunit beta 2 [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 375

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 131/396 (33%), Positives = 206/396 (52%), Gaps = 23/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++E+QA+ L  +Y +PV +     +   A  A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLYEHQARELFGEYGIPVPEAETAQTAAQAREAAERLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V  V +    DI  E Y+
Sbjct: 57  -------GGVKLAADAAAAEVTARQILGMDI-------KGHTVRTVMLAQPVDIEEEFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +     IAS +GGMDIEEVA   P+ + ++ + P  GVT++  A +     L 
Sbjct: 103 SYVLDRAADAFLAIASAEGGMDIEEVAATRPEAVARIPVPPAEGVTADKAAEIAAAAGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +   +   L++    +D  L+E+NPL+    G +  LD K++ DDNA +R     
Sbjct: 163 ----QETAPVLQALWQVLVREDALLVEVNPLVRTTAGDILALDGKVTLDDNARFRQARWG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                  ED  E  A    L+Y+ LDG +G + NGAGL M+T+D++   G  PANFLD+G
Sbjct: 219 NDDATLHEDPLEAVAAAKGLNYVKLDGTVGVIGNGAGLVMSTLDVVAGCGARPANFLDIG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA    +A    +I SD  V  +L+N+FGGI  CD + +GI+ A+  V++  PLV+RL+
Sbjct: 279 GGASAAVMADGLSVILSDRDVNSVLVNVFGGITACDAVAEGIVQALDSVRLTKPLVVRLD 338

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAV 395
           G N   G  ++ E    ++  +  +D AA++     
Sbjct: 339 GNNAARGRAILEERAHPLVQQSTTMDGAARRAADLA 374


>gi|45358668|ref|NP_988225.1| succinate-CoA ligase (ADP-forming), beta chain [Methanococcus
           maripaludis S2]
 gi|45047534|emb|CAF30661.1| succinate-CoA ligase (ADP-forming), beta chain [Methanococcus
           maripaludis S2]
          Length = 362

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 126/395 (31%), Positives = 214/395 (54%), Gaps = 35/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++ N+P+ K  ++S        ++++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENNIPIPKNKLVS------GKVESIDYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    ++      I  ++G+T+        G  V  V +E+   I++E Y+
Sbjct: 51  -------GGILFADNVDDANEKIESLIGNTV-------KGELVEKVLLEEQIKIVKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++V+R       I ST+GG+DIEEVA   P+KI KL ++P           +     + 
Sbjct: 97  GVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKAGIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +YKAF + D  L EINPL+  ++G++   D+ ++ DD+A +RH    
Sbjct: 157 SAEIPKVADVLCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNVDDDAYFRH---- 212

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                 E+     + ++   +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA FLDVG
Sbjct: 213 ----NYEKFEEFNKQEKSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACFLDVG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG++++ V  A    TS  +VKG  INI GGI RCD +  GI+  +KE   N+   +R+ 
Sbjct: 269 GGSNRETVKKALLKATSRKNVKGAFINILGGITRCDEVSMGIVDVLKE-NPNLKFAVRMM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G R+++E+G++  +   ++ AA+ +   +
Sbjct: 328 GTNEEEGRRILSENGISFES--SMEGAAKALTELI 360


>gi|183601650|ref|ZP_02963020.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683816|ref|YP_002470199.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190852|ref|YP_002968246.1| Succinyl-CoA synthetase subunit beta [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196258|ref|YP_002969813.1| Succinyl-CoA synthetase subunit beta [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183219256|gb|EDT89897.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621466|gb|ACL29623.1| succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249244|gb|ACS46184.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240250812|gb|ACS47751.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|289178591|gb|ADC85837.1| Succinyl-CoA synthetase beta chain [Bifidobacterium animalis subsp.
           lactis BB-12]
 gi|295793841|gb|ADG33376.1| Succinyl-CoA synthetase beta subunit [Bifidobacterium animalis
           subsp. lactis V9]
          Length = 397

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 126/397 (31%), Positives = 203/397 (51%), Gaps = 31/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++ V K V   + H    A   +  P+ V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIDVPKAVFAQNSHEVAEAADIIGYPV-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+       I    +IL  T+        G +V+ + V +  +IL E Y+
Sbjct: 57  -------GGVRIAHDRDEAILISEDILPMTI-------HGHKVSGILVTEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDR+S     +A+  GG ++EEVA+ +P+ + +L I  L     E    + + +   
Sbjct: 103 SISVDRSSRDFDVLATANGGTEVEEVARKHPESVKRLHISALEDFDLEAATKMAESIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR------LRVLDSKISFDDNALY 234
                    +  N+++ F   D +L+EINPL  + +        L  LD+KIS DDNA +
Sbjct: 163 HADSAQAAQILLNMWRCFKQNDATLVEINPLAKVGDPDDESSKSLCALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E  A++HNL Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHDGWKRFADPIVPDPFEQRAREHNLHYVHLTGEVGVIGNGAGLVMSSLDAVAFAGEEQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
                ANFLD+GGGA    +  + +II SD  V+ + IN++GGI  C+ +  GIL A  +
Sbjct: 283 TGVKAANFLDIGGGASSQVMCESLEIILSDPQVESVFINVYGGITSCEQVALGILEAADQ 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAES-GLNVITAIDL 384
           +  + P+V+R EG   D G R++AE+   N+     +
Sbjct: 343 LGASKPMVVRFEGNKADEGLRILAEADNPNIHVCETM 379


>gi|150402283|ref|YP_001329577.1| succinyl-CoA synthetase subunit beta [Methanococcus maripaludis C7]
 gi|150033313|gb|ABR65426.1| succinyl-CoA synthetase, beta subunit [Methanococcus maripaludis
           C7]
          Length = 362

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 126/395 (31%), Positives = 207/395 (52%), Gaps = 35/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++  +P+ K  +          + ++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENGIPIPKNKLTC------GKVDSIDYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L      I  ++G+T+        G  V  V +E+   I +E Y+
Sbjct: 51  -------GGILFSDNLDDANEKIESLIGNTV-------KGEVVEKVLLEEQIKISKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++V+R       I ST+GG+DIEEVA   P+KI KL ++            +     + 
Sbjct: 97  GVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLPLESGKEFLPYLAREMLKKAGIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +YKAF D D  L EINPL+  ++G++   D+ ++ DD+A +RH    
Sbjct: 157 SAEIPKVADVLCKVYKAFKDMDGILAEINPLVFTEDGKIIAADAVLNIDDDAYFRH---- 212

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D  EE  ++   ++   +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA FLDVG
Sbjct: 213 -NYDKFEEFEKQ---EKSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGEPACFLDVG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG+ ++ V  A    TS  +VKG  INI GGI RCD +  GI+  + E   N+   +R+ 
Sbjct: 269 GGSTRETVKKALLKATSRKNVKGAFINILGGITRCDEVSLGIVDVLNE-NPNLKFAVRMM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G ++++E+G++      +D AA+ +   +
Sbjct: 328 GTNEEEGRKILSENGVSFE--NSMDGAAKALTELI 360


>gi|213692043|ref|YP_002322629.1| Succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213523504|gb|ACJ52251.1| Succinate--CoA ligase (ADP-forming) [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320458155|dbj|BAJ68776.1| succinyl-CoA synthase beta subunit [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 400

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 123/399 (30%), Positives = 203/399 (50%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+++EYQA+ LL + ++P    +   + H    A   +  P  V+K+Q+  G RG+    
Sbjct: 1   MDLYEYQARQLLEEQDIPTPSAIFAQNSHEVAEAADAIGYPC-VIKAQVKIGHRGQA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I +   IL  T+        G +V+ V V +  +IL E Y+
Sbjct: 57  -------GGVKIAHNRDEAIVESESILPMTI-------HGHKVSGVLVAEAKNILHEYYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VDRTS     +A+  GG ++EE+AK++P+ + +L ID L          +   +   
Sbjct: 103 SISVDRTSRDFDVLATANGGTEVEEIAKEHPESVKRLHIDALGDFDLAAATEMARSIGFY 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN------GRLRVLDSKISFDDNALY 234
                    +   +++ F D D +L+EINPL  + +       +L  LD+KIS DDNA +
Sbjct: 163 HADVDQAAQILLKMWRVFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDDNAAF 222

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--- 291
           RH   +   D    D  E  A++H L Y+ L G +G + NGAGL M+++D +   G    
Sbjct: 223 RHGGWERFVDSVVPDPFEQRAREHGLHYVHLHGEVGVIGNGAGLVMSSLDAVSGAGEEQG 282

Query: 292 ---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
               PANFLD+GGGA    +A + +I+ SD  V+ + INI+GGI  C  +  GIL AV +
Sbjct: 283 SDVKPANFLDIGGGASAAVMAESLQIVLSDPQVESVFINIYGGITSCVEVANGILDAVAK 342

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDD 386
           +  + P+V+R +G     G  ++A +    +  +  ++D
Sbjct: 343 LGGSKPIVVRFDGNAAAEGLHILASANKPNIHVSETMED 381


>gi|167628505|ref|YP_001679004.1| succinyl-coa synthase, beta subunit [Heliobacterium modesticaldum
           Ice1]
 gi|167591245|gb|ABZ82993.1| succinyl-coa synthase, beta subunit [Heliobacterium modesticaldum
           Ice1]
          Length = 375

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 126/396 (31%), Positives = 204/396 (51%), Gaps = 26/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   E+  K +  ++ +PV +G ++ +   A  A   +  P+ V+KSQ+ +G RGK    
Sbjct: 1   MKCFEFMGKEIFARFGIPVPRGRMVLTPEDAAQAAAEIGKPV-VIKSQVLSGKRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   + +       E+L  T+        G  V  V VE+   I  ELY+
Sbjct: 57  -------GGIKFADTPEEAAQAAAEVLSMTV-------QGLPVRRVLVEEKLKIDAELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D  +     IAS +GGMDIEE  +     I K  +D  +G+ +     +   + L+
Sbjct: 103 AITIDGAAKAPVVIASAKGGMDIEEQDEAD---IVKTHLDVFLGLPAFLARDVARKIGLR 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G    +  D+   +Y     KD  L+EINPL++  +  L   D+K++ DD+ALYR  DI 
Sbjct: 160 GNLAKEFSDILSKMYCILNHKDAELVEINPLVVSGD-HLIAADAKLTIDDSALYRQKDIP 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + +   E  +  +A     S++ L G+I  M NGAG+ M T+D+I+L+GG PANF+D G
Sbjct: 219 FVDEDMTEVEKMAKAAGVG-SFVELGGDIAIMANGAGITMGTLDMIQLFGGRPANFMDAG 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG   +  A A  I+ +  + K I INIFGGI RCD +   +    +++ I +P+V+R+ 
Sbjct: 278 GGTGVEGTAKAISILLA-QNPKVIFINIFGGITRCDDVANALAQVKRDMGIPVPVVVRMV 336

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N + G R++ E G++     D+  AAQ  V   K
Sbjct: 337 GTNEEAGVRILKEVGID--AYRDMKTAAQMAVALAK 370


>gi|124485312|ref|YP_001029928.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Methanocorpusculum labreanum Z]
 gi|124362853|gb|ABN06661.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Methanocorpusculum labreanum Z]
          Length = 361

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 137/397 (34%), Positives = 216/397 (54%), Gaps = 37/397 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY+AK + R+  +PV   V+I+S   A +A K +     V+K+Q+  GGRGK    
Sbjct: 1   MKFREYEAKQIFREAGIPVPNSVLITSADEANAAQKKV-AEKVVLKAQVDVGGRGKAGGI 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                      + ++ +++    R++   T+        G  V  + VE+  +I  E YL
Sbjct: 60  -----------LPANAENISDVARDLFAKTI-------KGLPVEKILVEEALEISHEYYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLEL 179
           S+ +DR   M   + S++GG++IE +AK+ P+ + ++ +DP  + +    V ++      
Sbjct: 102 SITIDRAKKMPLILFSSEGGVEIETLAKERPEALRRVYVDPSFVTLPDFIVRNVI----- 156

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G    + G +  +L+  F  +D  L EINPL++   G +   D KI  DDN+L R   I
Sbjct: 157 -GTNPKEIGTIVRDLFAVFRSRDAVLAEINPLVMTPKG-ILAADGKIILDDNSLIRQ-GI 213

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            E RD++    RE EA++H  SY+ L+GNIG + NGAGL MAT+DII  Y G  ANFLDV
Sbjct: 214 SENRDLT---PREAEAEKHGFSYVELEGNIGVIGNGAGLTMATLDIISHYHGKAANFLDV 270

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA  D+V  A +++ S   VK I++N+ GGI RCD + KGI+ A     +  P+++R+
Sbjct: 271 GGGAASDRVMYAVQLVASMPGVKVIVVNLLGGITRCDEVAKGIIEA----GVPQPVIVRI 326

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G RL+ E G   + +  +D A +  V  V+
Sbjct: 327 AGTNEEEGRRLLQECG--YVMSDTMDAAIRAAVEVVQ 361


>gi|299134897|ref|ZP_07028089.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
 gi|298590707|gb|EFI50910.1| Succinate--CoA ligase (ADP-forming) [Afipia sp. 1NLS2]
          Length = 375

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 135/397 (34%), Positives = 210/397 (52%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ EY AK  +L    VP  +G V  +   A +A+  +     V+K+Q+  G RGK   
Sbjct: 1   MNLEEYAAKHHVLVPAGVPTPEGRVCKTPEEAAAAVTAIG--PSVIKAQVPTGKRGKS-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+++  +     S  R+IL  ++        G RV+ V VE    I RELY
Sbjct: 57  --------GGIKIAKTADEAASAARDILSMSIG-------GHRVSQVLVEQLCPIERELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D  S     + ST+GGMDIEEVA+ +P  I K ++D   G ++ D A++   L L
Sbjct: 102 AAVLIDVASRAPLVLFSTEGGMDIEEVAETHPDAIRKHIVDIHKGFSAADAAAMLKGLPL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A     ++   LY  F  KD  L+EINPL ++K+GR+  LD K   DD++  R  D+
Sbjct: 162 -GSAAGAVSEVLAKLYAIFDAKDAELVEINPLALLKDGRVVALDCKFVLDDSSGLRQPDL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++    +  + E    ++ L +I LDGN+G + NGAGL M TMD+I  +GG PANFL++
Sbjct: 221 AKVASPPKMTALEERGAENGLKFIQLDGNVGVLANGAGLTMTTMDVIDHFGGKPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A  ++ S+  VK ++IN  G   R DV+ +G++ A + +K  +P+   +
Sbjct: 281 GGEA-YTKSEIALDLVLSNPGVKSLVINFCGAFARTDVMAEGVVKAWETLKPKVPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D   +L+ E  L +     ++DA +  V A +
Sbjct: 340 HGTGEDEAVKLVRER-LGIEPYDFMEDAVKAAVEAAQ 375


>gi|209885856|ref|YP_002289713.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
 gi|209874052|gb|ACI93848.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
           carboxidovorans OM5]
          Length = 375

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 136/397 (34%), Positives = 211/397 (53%), Gaps = 23/397 (5%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ E+ AK  +L    VP  +G V  +   A +A+  +     V+K+Q+  G RGK   
Sbjct: 1   MNLEEHAAKHHVLVPTGVPTPEGRVCKTPEEAAAAVTAIG--PSVIKAQVPTGKRGKS-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+++  +     S  R+IL  ++        G RV+ V VE    I RELY
Sbjct: 57  --------GGIKIAKTADEAASAARDILSMSIG-------GHRVSQVLVEQLCPIERELY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D  S     + ST+GGMDIEEVA+ +P  I K ++D   G ++ D A++   L L
Sbjct: 102 AAVLIDVASRAPLVLFSTEGGMDIEEVAEKHPDAIRKHVVDIHKGFSAADAAAMLKGLPL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A    G++   LY  F DKD  L+EINPL ++K+GR+  LD K   DD++  R  D+
Sbjct: 162 -GSATEAVGEVLAKLYAIFQDKDAELVEINPLAVLKDGRVVALDCKFVLDDSSALRQPDL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ++   ++    E     + L +I LDGN+G + NGAGL M TMD+I  +GG PANFL++
Sbjct: 221 AKVATPAKMTELEQRGADNGLKFIQLDGNVGVLANGAGLTMTTMDVIDHFGGRPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A  ++ S+  VK ++IN  G   R DV+ +G++ A + +K  +P+   +
Sbjct: 281 GGEA-YTKSEIALDLVLSNPGVKSLVINFCGAFARTDVMAEGVVKAWETLKPKVPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D   +L+ E  L +     ++DA +  V A +
Sbjct: 340 HGTGEDEAVKLVRER-LGIEPYDFMEDAVKAAVEAAQ 375


>gi|294101518|ref|YP_003553376.1| Succinate--CoA ligase (ADP-forming) [Aminobacterium colombiense DSM
           12261]
 gi|293616498|gb|ADE56652.1| Succinate--CoA ligase (ADP-forming) [Aminobacterium colombiense DSM
           12261]
          Length = 377

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 133/402 (33%), Positives = 216/402 (53%), Gaps = 31/402 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q K L  +  + V K  ++ S       ++TL  P  V+KSQ+ +GGRGK    
Sbjct: 1   MKLYEFQGKELFARCGISVPKRRLVRSFED----LETLDAP-LVLKSQVLSGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V     S++ + + ++GS+L        G RV  +  E+  DIL+E YL
Sbjct: 53  -------GGVVVCDDNASLVQEGKRLIGSSL-------KGERVLALLAEEKVDILQEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++D        IAS  GGM+IE+VA++ P+KI KL  DPL G +      + D L L+
Sbjct: 99  SFVIDGELKKPLIIASAAGGMEIEKVAEEEPEKILKLSFDPLAGPSDYHFRRIADFLSLR 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   +   +Y  F   D SL+EINPL+    G L  LDSKI+ DD+A +R  +I 
Sbjct: 159 -NELKDLRKVLRAMYALFNQYDASLIEINPLVKTSAG-LIALDSKINLDDDAEFRQKEIF 216

Query: 241 ELRDVSEEDSREIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
           +     +   ++  AK  +   ++Y+ LDGNIG + +GAG  M ++D+I+ +GG  A+F 
Sbjct: 217 QEFQEQQNVIQQNNAKAKDEGTITYVPLDGNIGMISDGAGTGMLSLDLIRDFGGEAADFC 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSV--KGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           ++GG    D +  A + + + ++   K +L+ + GG  R D + +GI+    +  +++PL
Sbjct: 277 EMGGLTSPDVMYQAMETVFNRATKELKSLLVILIGGFNRMDEMAEGIIRYKNDHGLSVPL 336

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            +RL G     G +++ +SGL V    DL++A +K V A +G
Sbjct: 337 FVRLCGTMETEGKKMMIDSGLPVF--DDLEEAVEKAVMAAEG 376


>gi|134045522|ref|YP_001097008.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Methanococcus
           maripaludis C5]
 gi|132663147|gb|ABO34793.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanococcus
           maripaludis C5]
          Length = 362

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 125/395 (31%), Positives = 209/395 (52%), Gaps = 35/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK + ++  +PV K  +          + ++  P+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKEIFKENGIPVPKNKLTC------GKVDSIEYPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L      I  ++G+T+        G  V  V +++   I +E Y+
Sbjct: 51  -------GGILFADNLDDANKKIESLIGNTV-------KGELVEKVLLDEQIKIAKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++V+R       I ST+GG+DIEEVA   P+KI KL ++            +     + 
Sbjct: 97  GVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLPLESGKEFLPYLAREMLKKAGIP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   +YKAF + D  L EINPL+  ++G++   D+ ++ DD+A +RH    
Sbjct: 157 SAEIPKVADVLCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNIDDDAYFRHK--- 213

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D  EE  ++   ++   +Y+ LDG+I  + NGAGL +A+MDI+K +GG PA FLDVG
Sbjct: 214 --YDKFEEFKKQ---EKSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGEPACFLDVG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG++++ V  A    TS  +VKG  INI GGI RCD +  GI+  +KE   N+   +R+ 
Sbjct: 269 GGSNRETVKKALLKATSRKNVKGAFINILGGITRCDEVSLGIVDVLKE-NPNLKFAVRMM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N + G ++++E+G++      ++ AA+ +   +
Sbjct: 328 GTNEEKGRKILSENGVSFE--NSMEGAARALTELI 360


>gi|150399183|ref|YP_001322950.1| succinyl-CoA synthetase subunit beta [Methanococcus vannielii SB]
 gi|150011886|gb|ABR54338.1| succinyl-CoA synthetase, beta subunit [Methanococcus vannielii SB]
          Length = 362

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 125/395 (31%), Positives = 208/395 (52%), Gaps = 35/395 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+AK +  +  +P+ KG+V  +       ++ + GP+ V+K+Q+  GGRGK    
Sbjct: 1   MKLHEYEAKRIFNENGIPIPKGIVTKT------KLEDIEGPV-VIKAQVLVGGRGKA--- 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+    +L    S I  ++G  +        G  V  + +E+   IL+E Y+
Sbjct: 51  -------GGILFADTLNEANSKIESLIGKEV-------KGEHVESLLIEEKIKILKEYYV 96

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++VDR       I ST+GG+DIEE+A+  P+KI K  ++        +  ++     L 
Sbjct: 97  GVVVDRNEKNNVVIFSTEGGVDIEEIARTSPEKIIKYPVEAGSEFLPYNARNMLKKAGLS 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   +Y AF   D  L E+NPL+I   G++   D+ ++ DD+A ++H    
Sbjct: 157 SEEIPKVADIICKVYSAFKKMDGVLAEVNPLVITSEGKILAADAVLNVDDDAYFKH---- 212

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                  E     + ++   +Y+ LDG+I  + NGAGL +A+MD++K +GG PA FLD+G
Sbjct: 213 ----SYMEFEEFKKQEKSEFAYVELDGDIAVIGNGAGLTLASMDVVKEFGGNPACFLDIG 268

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V +A    T+ +SVKG  INI GGI RCD + KGI+  +KE K  +   +R+ 
Sbjct: 269 GGATREIVKSALLKATARNSVKGAFINILGGITRCDEVSKGIVDVLKE-KPELKFAVRMM 327

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G N   G  ++ ++  NV     ++DAA+ +   +
Sbjct: 328 GTNEKEGREILTKN--NVSYENSMEDAAKALTKII 360


>gi|301057634|ref|ZP_07198712.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
 gi|300448248|gb|EFK11935.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
          Length = 378

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 125/399 (31%), Positives = 205/399 (51%), Gaps = 27/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+   +     +PV +  V  S+  A      +  P+ ++K+Q+  GGRG     
Sbjct: 1   MRLHEYEGADIFESMKIPVPRRGVAESIEDAAKIAGEIGYPV-ILKAQVLVGGRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +++     E+ G  +        G +V  + V + ADI +ELY+
Sbjct: 57  -------GGVKTANTPEALEEMAGELFGKEI-------KGLKVRKIMVSEKADIEQELYI 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D  SG    +AST+GG++IE VA   P KI    +DP  G+      +L   L L 
Sbjct: 103 GITIDGYSGRPVVVASTEGGVNIEAVADQSPDKIASFHVDPKFGLYPYHARNLFGKLGLT 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR--HLD 238
            +A I   D+   LYK F   +   +EINPL ++ NG +  +DS +  D++AL R  H  
Sbjct: 163 QRALISCADVTVKLYKIFTSLEALQVEINPLAVLANGGVIAVDSVLEIDNSALSRIQHP- 221

Query: 239 IQELRDVSE--EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
              L D  E  E+S E + K+  ++Y+ LDG+I  + +GAGL MA+MDII      PANF
Sbjct: 222 ---LPDYWERIENSLERKGKEIGVTYVDLDGDIALISSGAGLGMASMDIIGKT-LKPANF 277

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           L+ GGG   D +     ++T+   +K + INI+GGI       KG++  +KE  + IP+V
Sbjct: 278 LETGGGITADLLYKCMDLVTTKKRIKAVFINIYGGINPIHEGAKGVVRFIKENNLQIPIV 337

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            +  G + +    ++   G++V+T    + A +K+V  +
Sbjct: 338 AKALGNHQEETWEILRSGGVHVVTDAATEAAVEKLVEVL 376


>gi|89892991|ref|YP_516478.1| hypothetical protein DSY0245 [Desulfitobacterium hafniense Y51]
 gi|89332439|dbj|BAE82034.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 372

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 133/397 (33%), Positives = 209/397 (52%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L  +  +P+ +  +I  +    SA++ L  P  V+K+Q+  GGRGK    
Sbjct: 1   MKLFEYQAKELFAESGIPIPQNALIGDISELNSALEKLGLPC-VLKAQVLQGGRGKAGL- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                    V+   + +    +   IL +T         G     + VE+     RE+Y+
Sbjct: 59  ---------VKFVRTKEEAQKEAERILEAT---------GK---KLLVEEAVPYEREMYV 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  SG+   +A  +GG+DIE++A+  P+KI K  +D  +G+ +    ++   L L+
Sbjct: 98  SITVDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGLMAYQADNIMYGLGLE 157

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +G  +   LY+ F   +  L+EINPL+I+++G +   D K + DDNALY+     
Sbjct: 158 QSAAKEGSKILLKLYQLFVKYNAELVEINPLMILRDGTMAAADGKFNLDDNALYKQNRFS 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA    + YIA +G+IG MV GAGLA   +D+I  YGG  AN+L+  
Sbjct: 218 LTRDHYKSD-FEYEAALDGIPYIAFEGDIGMMVAGAGLANVVLDLIHYYGGTVANYLEF- 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG +  K     K++   +  K ILI  FG I R DV+ +GI+ AVKE+K  IP+V  + 
Sbjct: 276 GGPNYHKAQQCMKMMLK-AKPKCILIATFGTIARADVMAQGIVEAVKELKPEIPIVAVIR 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+  +GL  ++  D ++A +K V  V G
Sbjct: 335 GTGEEDAQKLLRSAGLPSLS--DTEEAVRKAVEIVGG 369


>gi|297670915|ref|XP_002813597.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like, partial [Pongo abelii]
          Length = 354

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 130/326 (39%), Positives = 175/326 (53%), Gaps = 28/326 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 38  LNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 96

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 97  --NSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 154

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR+      + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 155 AILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 214

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G  +                         PL     G +   D+KI+FDDNA +R  DI 
Sbjct: 215 GPLKSQVYK--------------------PL-----GDVVCFDAKINFDDNAEFRQKDIF 249

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            + D SE +  E EA +++L YI LDGNI C VNGAGLAMAT DII L GG PANFLD+G
Sbjct: 250 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLG 309

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI 326
           GG  + +V  AFK++T+D  V  + +
Sbjct: 310 GGVKEAQVYQAFKLLTADPKVTFLFV 335


>gi|329765514|ref|ZP_08257090.1| succinate--CoA ligase (ADP-forming) [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137952|gb|EGG42212.1| succinate--CoA ligase (ADP-forming) [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 368

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 128/396 (32%), Positives = 209/396 (52%), Gaps = 29/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+QAK L R+Y + +      +++       K L  P +V+K Q+  GGRGK    
Sbjct: 1   MRLLEFQAKELFRQYGINLLPSKASTNIEEGRKHAKELGYP-FVIKIQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         ++LG T+        G +   + +E  ADI +ELYL
Sbjct: 57  -------GGIQKCQNDDEFDLKYPQVLGLTI-------KGEKARAILLEKMADIKKELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R+      IAS +GG++IE V     +++       L  V+ +    +   ++L+
Sbjct: 103 SMFLNRSKRCYTIIASPEGGVEIESVKNQIIREVG------LGNVSEQVAREVAKEMKLE 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+A  D  D+   L K   +K+  L EINPL IM++G L  LD K   DDN+ +RH ++Q
Sbjct: 157 GKAADDFVDILQKLSKLTIEKEAELAEINPLAIMQDGSLMALDGKFVTDDNSNFRHDELQ 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + ++ +E + R   A++   S + LDGNI  + NGAGL M+T+D++   GG PA FLDVG
Sbjct: 217 KYQEKTEIEER---AEKSGFSLVELDGNIAVVGNGAGLVMSTLDMLSDNGGKPACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A  +I+  S VKGIL+N++GGI++  V+ +  L A  +  I++P+  RL+
Sbjct: 274 GGATTESVYEALTLISKMSRVKGILVNLYGGIVKTTVVAEAFLKAYDDKLIDLPVFARLK 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G   +    ++  S   +     ++DA    V  VK
Sbjct: 334 GTESEKAKEMLKGSRTKIF--DSVEDAINAAVMGVK 367


>gi|219666260|ref|YP_002456695.1| succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
 gi|219536520|gb|ACL18259.1| Succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
          Length = 372

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 132/397 (33%), Positives = 209/397 (52%), Gaps = 28/397 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L  +  +P+ +  +I  +    SA++ +  P  V+K+Q+  GGRGK    
Sbjct: 1   MKLFEYQAKELFAESGIPIPQNALIGDISELNSALEKIGLPC-VLKAQVLQGGRGKAGL- 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                    V+   + +    +   IL +T         G     + VE+     RE+Y+
Sbjct: 59  ---------VKFVRTKEEAQKEAERILEAT---------GK---KLLVEEAVPYEREMYV 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  SG+   +A  +GG+DIE++A+  P+KI K  +D  +G+ +    ++   L L+
Sbjct: 98  SITVDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGLMAYQADNIMYGLGLE 157

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             A  +G  +   LY+ F   +  L+EINPL+I+++G +   D K + DDNALY+     
Sbjct: 158 QSAAKEGSKILLKLYQLFVKYNAELVEINPLMILRDGTMAAADGKFNLDDNALYKQNRFS 217

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D  E EA    + YIA +G+IG MV GAGLA   +D+I  YGG  AN+L+  
Sbjct: 218 LTRDHYKSD-FEYEAALDGIPYIAFEGDIGMMVAGAGLANVVLDLIHYYGGTVANYLEF- 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GG +  K     K++   +  K ILI  FG I R DV+ +GI+ AVKE+K  IP+V  + 
Sbjct: 276 GGPNYHKAQQCMKMMLK-AKPKCILIATFGTIARADVMAQGIVEAVKELKPEIPIVAVIR 334

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G   +   +L+  +GL  ++  D ++A +K V  V G
Sbjct: 335 GTGEEDAQKLLRSAGLPSLS--DTEEAVRKAVEIVGG 369


>gi|221045470|dbj|BAH14412.1| unnamed protein product [Homo sapiens]
          Length = 291

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 130/275 (47%), Positives = 182/275 (66%)

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           ++R+      I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +      
Sbjct: 1   MERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNI 60

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELR 243
                +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+
Sbjct: 61  VESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQ 120

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA 303
           D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA
Sbjct: 121 DWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGA 180

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
              +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  
Sbjct: 181 TVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTR 240

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 241 VDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 275


>gi|134085328|ref|NP_001076816.1| succinate-CoA ligase, GDP-forming, beta subunit [Xenopus (Silurana)
           tropicalis]
 gi|134023817|gb|AAI35373.1| LOC496495 protein [Xenopus (Silurana) tropicalis]
          Length = 269

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 124/264 (46%), Positives = 169/264 (64%)

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
            F  S QGGMDIEEVA+  P+ IFK  ID   G+       + D L  +G  +    +  
Sbjct: 3   LFFGSPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQALRMADNLGFKGPLQQQAAEQI 62

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
             LY  F   D + +E+NP      G++   D+KI+FDDNA +R  +I  + D SE D  
Sbjct: 63  KRLYHLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDDTSETDPI 122

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
           E EA  ++L YI +DGNI C VNGAGLAMAT DII L+GG PANFLD+GGG  + +V  A
Sbjct: 123 ENEANSYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKESQVYQA 182

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FK++T+D  V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    R++
Sbjct: 183 FKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAKRIL 242

Query: 372 AESGLNVITAIDLDDAAQKIVHAV 395
           AESGL + +A DLDDAA+K V ++
Sbjct: 243 AESGLPITSANDLDDAARKAVASI 266


>gi|317486380|ref|ZP_07945208.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
 gi|316922369|gb|EFV43627.1| succinate-CoA ligase [Bilophila wadsworthia 3_1_6]
          Length = 373

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 119/397 (29%), Positives = 189/397 (47%), Gaps = 26/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK   R+  +P  KGV++  +   + A   +  P  V+KSQ+ +GGRGK    
Sbjct: 1   MKLFEYQAKEAFREKGLPTPKGVLVRGMDELDGAFAEVGFPC-VLKSQVLSGGRGKAGLI 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++  D++       +L                          V  + VE+  DI RE+YL
Sbjct: 60  KVVKDAESAKATAKTLFESE--------------------HNVRMLLVEEAVDIDREIYL 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD     +  I   +GG++IE++A   P KI  + +D   G+    V +L   + L 
Sbjct: 100 SITVDPVESKIMLIGCAEGGVEIEKLAATDPDKIVTVRVDIAEGLGGYHVNNLTYGMGLS 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F   D  L EINPL I K+G+    D K+  DDN+++R     
Sbjct: 160 GDLGKQVGAVVRGLYKTFRAYDAQLAEINPLFITKDGKAIAGDGKLIIDDNSVWRQPSYP 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + +    EA Q  + Y+  +G+I  M  GAGL     D+I   GG PA +++  
Sbjct: 220 LTRDYFDSEVEF-EAAQEGIPYLQFNGDIALMCAGAGLTTTVFDLINDAGGHPATYVEF- 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  K     ++     S K IL+  FG I R DV+ +G++ A+K  +   P+V  + 
Sbjct: 278 GGANYTKAVRTMELCLKTPS-KVILVVTFGTIARADVMAQGLVEAIKAHQPKQPIVTCIR 336

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N +    ++ ++GL  +T  + ++A Q+ V    G
Sbjct: 337 GTNEEEAFAILRDAGLEPLT--NTEEAVQRAVDIAAG 371


>gi|297156122|gb|ADI05834.1| succinyl-CoA synthetase subunit beta [Streptomyces bingchenggensis
           BCW-1]
          Length = 375

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 129/387 (33%), Positives = 205/387 (52%), Gaps = 25/387 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+QA+ L  +Y V V +  V  S  AA +A + L G + VVK+Q+  GGRGK    
Sbjct: 1   MDLFEHQARELFERYGVLVPRAEVAGSAPAARAAAERLGGRV-VVKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++ +   +     R+ILG  +        G  V+ V V +  ++ RE Y+
Sbjct: 57  -------GGVKLAADPAAAELTARQILGMDI-------KGHTVHQVMVAEPVEVEREFYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
              +DR  G    IAS +GGM+IEEVA   P+ + ++ +DP  GVT    A +     L 
Sbjct: 103 GYTLDRARGRFLAIASAEGGMEIEEVAARRPEAVARIAVDPEEGVTEAKAAEIAAAGGLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                +       L+    ++D  L+E+NPL++ + G +  LD K++ DDNA +R     
Sbjct: 163 ----AEAAATLHRLWTVLTEQDALLVEVNPLVVTRGGAIVALDGKVTLDDNADFRRT--Y 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D +     E EA    L+Y+ LDG +G + NGAGL M+T+D++   G  PA+FLD+G
Sbjct: 217 AYED-TGGAGLEAEAAAKGLNYVKLDGEVGVIGNGAGLVMSTLDVVAGCGARPADFLDIG 275

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +A    ++  D  V+ +L+N+FGGI  CD + +GI+ A+  V +  PLV+RL+
Sbjct: 276 GGASAEVMADGLSVVLGDPHVRSVLVNVFGGITACDAVAEGIVRALDTVTLTKPLVVRLD 335

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDA 387
           G +   G  ++ E    ++  +D  D 
Sbjct: 336 GNSAARGRAILTERAHPLVHQVDTMDG 362


>gi|289705453|ref|ZP_06501847.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
 gi|289705919|ref|ZP_06502297.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
 gi|289557365|gb|EFD50678.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
 gi|289557838|gb|EFD51135.1| succinate-CoA ligase, beta subunit [Micrococcus luteus SK58]
          Length = 342

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 120/355 (33%), Positives = 192/355 (54%), Gaps = 25/355 (7%)

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  GGRGK           GGV+V  +        + ILG  +        G  V+ V +
Sbjct: 1   MKVGGRGKA----------GGVKVAKTADEAYEHAKAILGMDI-------KGHTVHQVMI 43

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
             GADI  E Y S+L+DR +     + S +GGM+IE++A++ P+ + K+ +  L G+ +E
Sbjct: 44  AQGADIAEEYYFSVLLDRANRTYLAMCSVEGGMEIEQLAEERPEALAKVPVSALTGIDAE 103

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +        + R D  ++   L++ F  +D +L+E+NPL+   +G +  LD K+S 
Sbjct: 104 TAQKIVTEAGFPEELRADVAEVIQKLWEVFEKEDATLVEVNPLVKTGDGTILALDGKVSL 163

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           DDNA +RH     L D   ED  E +AK ++L+Y+ LDG +G + NGAGL M+T+D++  
Sbjct: 164 DDNAQFRHEGHAALVDERTEDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAY 223

Query: 289 YGG-----APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
            G       PANFLD+GGGA+ + +A    +I  D  VK + +N+FGGI  CD +  GI+
Sbjct: 224 AGEQHGGVKPANFLDIGGGANAEVMANGLDVILGDEQVKSVFVNVFGGITACDQVANGIV 283

Query: 344 SAVKEVK--INIPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            A++ +      PLV+RL+G  V+ G R++ E+   ++T A  +D+ A K     
Sbjct: 284 KALEILGDTATKPLVVRLDGNAVEEGRRILQEANHPLVTLAATMDEGADKAAELA 338


>gi|256370651|ref|YP_003108476.1| succinyl-CoA synthetase subunit beta [Candidatus Sulcia muelleri
           SMDSEM]
 gi|256009443|gb|ACU52803.1| succinyl-CoA synthetase beta subunit [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 392

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 147/404 (36%), Positives = 222/404 (54%), Gaps = 25/404 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP----LYVVKSQIHAGGRGK 56
           M +HEYQAK +L+ + + V   ++ S +     A K +       + V+K+QI+A     
Sbjct: 1   MKLHEYQAKKILKTFGIKVPYRIMASKMEETVYAAKKIFKKTKKYICVIKAQINA----- 55

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL- 115
                      GG+++ +S+K V      I+G  L+T QT   G  V  V + +      
Sbjct: 56  -----GGRGKGGGIKIANSIKDVYKKASNIIGKKLVTNQTNKKGKMVKKVIISEEVYTTG 110

Query: 116 --RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             +E YLS+  DR       I S +GG++IE   K      F   IDP IG+    +  +
Sbjct: 111 KNKEYYLSIFSDRNRYKNILIYSKEGGIEIESKKKSV----FFKKIDPYIGIQEFQIRKI 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               +++  A ++      N Y A+   D  LLEINPL+I K   +  +D+K   D+NA+
Sbjct: 167 AFHFKMKDSALMNLKLFIKNFYNAYISSDAYLLEINPLLITKKNEILAIDAKGILDENAI 226

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
           +RH+D + + D  + D RE+EAK+  L+++ LDG + CMVNGAGLAMATMD+IKL G  P
Sbjct: 227 FRHIDYKSM-DCEDLDYRELEAKKAGLNFLKLDGEVACMVNGAGLAMATMDMIKLTGANP 285

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK-IN 352
           ANFLD+GG AD  ++     +I  D  VK ILINIFGGI+RCD++ +GIL   ++ K IN
Sbjct: 286 ANFLDLGGQADLKRIKKGLDLILKDKKVKLILINIFGGIVRCDIVAEGILKFFEKKKFIN 345

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            P+++RLEG NV +  + + +  +N      L++AA KI   +K
Sbjct: 346 FPIIIRLEGTNVKLAKKKLKK--INCFYVSSLEEAAMKIKVLLK 387


>gi|207344930|gb|EDZ71911.1| YGR244Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 277

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/276 (42%), Positives = 176/276 (63%), Gaps = 3/276 (1%)

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           +DR +     IAS+QGGM+IEEVA+  P  I K  I+   G++ +    +   L     A
Sbjct: 1   MDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFSPDA 60

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLII---MKNGRLRVLDSKISFDDNALYRHLDIQ 240
           + +      NLYK F ++D + +EINPL         ++   D+K  FDDNA +R   I 
Sbjct: 61  QDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIY 120

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD+S+ED  E++AK+++L+++ L GNIGC+VNGAGLAMATMD+IKL GG PANFLD G
Sbjct: 121 SWRDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCG 180

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + +   F++I S+ +V  I +NIFGGI+RCD +  G++ A +E+++ +P+V RL+
Sbjct: 181 GGATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQ 240

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  V+ G  +I +SG+ + +  +LD AA+K+V   +
Sbjct: 241 GTKVEEGRDIINKSGVKIYSFDELDPAAKKVVELTQ 276


>gi|55957256|emb|CAI15150.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
          Length = 298

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 119/281 (42%), Positives = 169/281 (60%), Gaps = 3/281 (1%)

Query: 39  PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP 98
                V+K+Q+ AGGRGKG F+   +  KGGV++  S +   +   +++G  L TKQTG 
Sbjct: 21  GSKDVVIKAQVLAGGRGKGTFE---SGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGE 77

Query: 99  TGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL 158
            G   N V V +     RE Y ++ ++R+      I S+ GG++IE+VA + P+ I K  
Sbjct: 78  KGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEP 137

Query: 159 IDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
           ID   G+  E    L   +           +    LY  F   D +++EINP++   +G 
Sbjct: 138 IDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGA 197

Query: 219 LRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGL 278
           +  +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGL
Sbjct: 198 VLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGL 257

Query: 279 AMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDS 319
           AMATMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD 
Sbjct: 258 AMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDK 298


>gi|254513128|ref|ZP_05125194.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
 gi|221533127|gb|EEE36122.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
           KLH11]
          Length = 384

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 121/397 (30%), Positives = 207/397 (52%), Gaps = 14/397 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E  +K LL +Y + + +G    +   AE+A K      YVVK+ I AGGRG     
Sbjct: 1   MFLSEQVSKELLSQYGLLIPEGRTAKTPELAEAACKEFNAKRYVVKALIPAGGRGLA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++  SV      +LGSTL+T+QT   G RV+ VYVE   DI ++ ++
Sbjct: 58  -------GGVKFAATPSSVREIAENLLGSTLVTEQTNEGGERVDAVYVEAAIDIAKDYFI 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D  +G    +AS+ GG++ E+ ++     +   L+ P    +   +      + ++
Sbjct: 111 AIALDPGTGSPLLLASSDGGVEFEQRSRMDEGTVRTHLLAPESDESRAALEGFLKEIGIE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D      +AFC+ DM+LLEINP      G   V+D+K+  D N ++RH + +
Sbjct: 171 GTT---AIDSIFAARRAFCENDMTLLEINPFARTATGDWMVIDAKVLLDGNTIFRHPEFE 227

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            +         E+EA+++N++ + L GN+G + NGAGL +AT D++   GG PANF+D+ 
Sbjct: 228 TMAADLSRPESELEAQKNNINLVKLTGNVGVVANGAGLGLATHDMLVDAGGDPANFMDIR 287

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINI-FGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
             A    VA   +++  D +VK IL+N+  GG+   D + +GI  A    +  +P++  +
Sbjct: 288 TTAKSFDVAKGVELLLGDPNVKVILLNVHGGGMTAADTVAEGINFAYSRSERQLPVIAHI 347

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G N + G R++ +  + V T   + DA  ++V   +
Sbjct: 348 SGQNAEWGIRILRDRKVPVETFDTISDAVSRVVEIAR 384


>gi|322788071|gb|EFZ13896.1| hypothetical protein SINV_14509 [Solenopsis invicta]
          Length = 288

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/288 (45%), Positives = 186/288 (64%), Gaps = 1/288 (0%)

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + +S  +V + ++ +LG  LITKQT   G  V  + + +  DI RE Y+ +L+DR     
Sbjct: 1   LFNSRNAVANYVKNMLGHRLITKQTSKDGILVQKIMIAESVDIARETYVCILMDRQHNGP 60

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL-QGQARIDGGDL 190
             IAS  GGMDIE VA+ +P++I  + +D   G+  E    +C  L   +          
Sbjct: 61  VLIASPAGGMDIETVAEKHPEQIKTVSLDIYHGIDDEIAKDVCIFLGFSKPDILNKAIYE 120

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
             NL+K F D D   +EINPL+   + ++  +D+KI+FDDNA +R  D+  L DVSE+D 
Sbjct: 121 LKNLWKLFVDIDALQVEINPLVETTDKQVVAVDAKITFDDNAQFRQQDLFALEDVSEKDP 180

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           RE++A + NL+YI +DGNIGC+VNGAGLAMATMDIIKL GG+PANFLDVGG   +D+V  
Sbjct: 181 REVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPANFLDVGGNVKEDQVFQ 240

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           AF+I++ D  VK IL+N+FGGI+ C  + KGI++A + + + IPLV+R
Sbjct: 241 AFRILSEDPKVKVILVNVFGGIVNCVTIAKGIIAASQNLGLKIPLVVR 288


>gi|303327248|ref|ZP_07357690.1| succinyl-CoA synthase, beta subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863236|gb|EFL86168.1| succinyl-CoA synthase, beta subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 373

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 123/397 (30%), Positives = 191/397 (48%), Gaps = 26/397 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ EYQAK   R+  +   +GV++ SV   ++A      P  V+KSQ+  GGRGK    
Sbjct: 1   MNLFEYQAKEAFRECGITTPRGVLVRSVEELDAAFAETGFPC-VLKSQVLRGGRGKAGLI 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +  D++ G R                       +   +   V  + VE   DI RE+YL
Sbjct: 60  RMVGDAETGKREA--------------------GELFASAHNVRMLLVEQAVDIAREIYL 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ VD  +G    +   +GG+DIE +A   P+KI ++ +D   G+    V +L   + L 
Sbjct: 100 SITVDPVTGTALLMGCAEGGVDIESLAATQPEKIVRVHVDMAEGLGGYHVNNLIYGMGLS 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+     G     LYK F   D  L EINPL I ++G+    D K+  DDN+L R     
Sbjct: 160 GEEAKQVGAAARGLYKVFRACDAQLAEINPLFITRDGQAVAGDGKLIIDDNSLPRQPRYP 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD  + D    EA +  + Y+  DG+I  M  G+GL     D+I   GG+ A ++D  
Sbjct: 220 LSRDYFDSDVEF-EAAREGIPYLRFDGDIALMCAGSGLTTTVFDLIHDEGGSVATYVDF- 277

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+  +   A ++     S K IL+  FG I R DV+ +G++ A+K++   +P+V+R+ 
Sbjct: 278 GGANYTRAVRAMELCLETPS-KVILVVTFGTIARADVMAEGVVEAIKKLHPKVPVVLRIR 336

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N       + ++GL  +   D ++A  K V    G
Sbjct: 337 GTNEAEAFETLKQAGLANLY--DTEEAVCKAVDLAAG 371


>gi|295698453|ref|YP_003603108.1| succinyl-CoA synthetase beta chain [Candidatus Riesia pediculicola
           USDA]
 gi|291157079|gb|ADD79524.1| succinyl-CoA synthetase beta chain [Candidatus Riesia pediculicola
           USDA]
          Length = 396

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 129/403 (32%), Positives = 211/403 (52%), Gaps = 16/403 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EYQ K +L      V KG    ++    +AI  L   ++V+K QI +GGR K    
Sbjct: 1   MYLYEYQVKRMLFLSGFLVPKGFFCQTIEEVRNAIFQLNQKIFVLKCQIQSGGRKKS--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G + + S++K       + +   LIT QT   G  V  + VE+   I +E Y 
Sbjct: 58  -------GAIEIVSNIKEAELFFFKWMNKKLITNQTNSGGQLVIGILVEEHVSIKKETYA 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D+    +  I S+ GG ++E+  ++  +   K+ IDP+  +T   +    D L  Q
Sbjct: 111 SISLDKNDKQIMLIFSSSGGTEVEKYHRNCKKLFRKIEIDPIKKLTLNILEKHVDNLGYQ 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L   F   D+  +EINP+ I K GR   LD K + D NA +R  +++
Sbjct: 171 KKEGKFFSKFLIKLLNMFFYLDLLFVEINPIAIDKKGRFFCLDGKSNMDCNAFFRKKELK 230

Query: 241 E--LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +  L+  S+ D+ + +  + + +Y+ L GNIGC+ NGAGLAMATMD+IK+YGG PANFLD
Sbjct: 231 KNILKFDSKIDNEKFKLYEPS-NYVLLKGNIGCIANGAGLAMATMDLIKIYGGNPANFLD 289

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN--IPLV 356
           +GG  D   + +    +    +V  ILINIFGGI+RC+++ + ++ ++K+++      ++
Sbjct: 290 IGGNTDLSGMKSYIHKVLVQKNVNVILINIFGGIVRCEIVAEALIQSLKDIQNECFPKIL 349

Query: 357 MRLEGANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKGV 398
           +RL G     G   I +SG  N+    +L+   ++ VH  K V
Sbjct: 350 IRLSGNGYQSGINYIEKSGFNNIFVMDNLEKMVKRSVHLAKNV 392


>gi|85857865|ref|YP_460067.1| succinyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB]
 gi|85720956|gb|ABC75899.1| succinyl-CoA synthetase beta chain [Syntrophus aciditrophicus SB]
          Length = 380

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 110/396 (27%), Positives = 193/396 (48%), Gaps = 20/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +HEY+A  +  +  +PV +  V S++H A      +  P+ ++K+Q+  GGRG     
Sbjct: 1   MRLHEYEALDIFERNGIPVPRRGVASTMHEALRVAGEIGYPV-ILKAQVLVGGRGLA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++  SS   +      +L S +        G  V  + V +  ++ +ELY+
Sbjct: 57  -------GGIKTASSPDELKEVAEALLSSDV-------KGLPVLKLLVCEKVEVAKELYV 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
            + +D  SG    +AST+GGM IEE A+  P+KI  + +D  +        ++   L  +
Sbjct: 103 GITIDGYSGKPVIVASTEGGMLIEETARTSPEKIAAIHVDSSLEFYPYQARTMLGRLSGI 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             Q      D+   LY      +  + EINPL+++ NG L  +D+ +  DD+A+ R    
Sbjct: 163 NQQLLTSWTDVIGQLYNVVMRYEPLICEINPLVVLPNGGLIAVDAVLEVDDSAISRVRFP 222

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              R    E+  E   ++  ++Y+ LDG+IG + +GAGL MA+ DII      PANFL+ 
Sbjct: 223 LPDRVERIENPLERRGREIGVTYVDLDGDIGLISSGAGLGMASTDIIGER-MKPANFLET 281

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGG   D +    ++I     ++ + IN++GGI       KG++  ++E  + IP+V + 
Sbjct: 282 GGGITADLLYKCMELIMMKPGLRAVFINVYGGINPIHEGAKGVVRYIQEHNVKIPIVAKA 341

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G   +    +   +G++V+T    + A  ++   V
Sbjct: 342 LGNRQEETWEIFRSAGVHVVTEAATEKAIDRLYELV 377


>gi|167043822|gb|ABZ08512.1| putative CoA-ligase [uncultured marine crenarchaeote
           HF4000_APKG3D24]
          Length = 368

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 117/395 (29%), Positives = 203/395 (51%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L ++Y + V   +V   V +     + +  P +V+K+Q+  GGRGK    
Sbjct: 1   MRLLEYQAKELFKEYGIRVPTSIVSKDVESGRKDAEKIGYP-FVIKAQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         ++L  T+        G +   V +E  ++  +E+YL
Sbjct: 57  -------GGIQKCHNEDEFELKYPQVLNMTI-------KGEKTRAVLLEKMSEYEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL ++R+      I+ST+GG++IE V     ++I       L  VT +    +   + L 
Sbjct: 103 SLFLNRSKRCYTIISSTEGGVEIESVKNQVIREIG------LGDVTKKVAEEVAKEIGLD 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   L K   +K+  L EINPL+I+K+G +  LD KI  DDN+ +RH ++ 
Sbjct: 157 ENSVTHFVDILQKLSKLTIEKEAELTEINPLVILKDGSMMALDGKIMTDDNSNFRHKELT 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + ++ +E + +   A++   S + LDGNI  + NGAGL M+T+D++   GG  A FLDVG
Sbjct: 217 KYQEKTELEKK---AEESGFSLVELDGNIAVIGNGAGLVMSTLDMLTDNGGKAACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V  A  +I+   +VK +L+N++GGI++  ++    L A  +  I +P+  RL 
Sbjct: 274 GTATTESVYEALTLISRMKNVKAVLVNLYGGIVKTTIVASAFLQAYDDKIIILPVFARLM 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           GA  +    ++ +S      +  +++A  K+V  V
Sbjct: 334 GAESEKSKEMLKDS--ETQLSPSIEEAINKVVMEV 366


>gi|118575316|ref|YP_875059.1| succinyl-CoA synthetase, beta subunit [Cenarchaeum symbiosum A]
 gi|118193837|gb|ABK76755.1| succinyl-CoA synthetase, beta subunit [Cenarchaeum symbiosum A]
          Length = 365

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 129/392 (32%), Positives = 203/392 (51%), Gaps = 29/392 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQAK L  +Y + V +G     +  A    K +  P +V+K Q+  GGRGK        
Sbjct: 2   EYQAKELFAEYGIKVPQGRASKGIEQARKDAKDIGYP-FVIKIQVPVGGRGKA------- 53

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG++  ++   ++    ++   T+        G R   + +E  ADI +ELYLSL +
Sbjct: 54  ---GGIQKCTNEDELVLRYPQVYDLTI-------KGERARAILLEKMADISKELYLSLFL 103

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +R+      IAS +GG++IE V     +++       L  V+ E  A +   + L+G A 
Sbjct: 104 NRSKRCYTVIASAEGGVEIESVKSQIIKEVG------LGKVSPEVAAQVASEMGLEGAAA 157

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
            D  D+   L     +K+  L EINPL I+ +G L  LD K+  DDNA +RH ++++ R+
Sbjct: 158 KDLSDILQKLSLLTTEKEAELAEINPLAILSDGTLLALDGKVMTDDNAAFRHQELEKYRE 217

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
            SE + R   A++   S + LDGNI  + NGAGL M+T+D++   GG PA FLDVGGGA 
Sbjct: 218 SSELEER---AQKSGFSLVELDGNIAVVGNGAGLVMSTLDMLSDSGGRPACFLDVGGGAT 274

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
            + V  A  +I     VKGIL+N++GGI++   +    L A  +  +++P+  RL GA  
Sbjct: 275 TESVYEALTLINKMDRVKGILVNLYGGIVKTTTIASAFLKAYDDGIVDLPVYARLRGAES 334

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           D    ++  S  N+     ++DA    V  ++
Sbjct: 335 DKAREMLKSSSTNLY--DTVEDAISAAVMGIE 364


>gi|300786451|ref|YP_003766742.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
 gi|299795965|gb|ADJ46340.1| succinyl-CoA synthetase beta subunit [Amycolatopsis mediterranei
           U32]
          Length = 380

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 142/402 (35%), Positives = 218/402 (54%), Gaps = 33/402 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E++A+ L  K+ VPV +G V +   AA +A   L  P+ V+K+Q+  GGRGK    
Sbjct: 1   MDLFEHEARELFEKHGVPVPRGRVAADPAAARAAAVALGAPV-VIKAQVKTGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  +         +ILG  +        G RV+ V V + ++I  E YL
Sbjct: 57  -------GGVRVVHTADDAEQAADDILGMDI-------KGHRVHRVLVTEASEIADEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR       +AS +GGMDIEEVA   P  + ++ +DPL G+ +  VA+        
Sbjct: 103 SFLLDRAGRTFLAMASAEGGMDIEEVAATRPDALVRVPVDPLAGIDATAVAAAFPA---- 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
              R +   +   L++ F  +D +L+E+NPL +   G +  LD KI+ DDNA +R     
Sbjct: 159 -DVRAEVAGVVEKLWEVFAAEDCTLVEVNPLALTATG-IVALDGKITLDDNAAFRRS--S 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----KLYGGAPANF 296
              D S+ D  E EA+   L+Y+ LDG+IG + NGAGL M+T+D++    +     PANF
Sbjct: 215 AFDDTSDGDPLEREARAKGLNYVKLDGDIGVIGNGAGLVMSTLDVVAAAAEAGARGPANF 274

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK--INIP 354
           LD+GGGA    +     +I  D  V+ + +N+FGGI  CD +  GI+ +V+ +      P
Sbjct: 275 LDIGGGASAQVMVDGLTVILGDPQVRSVFVNVFGGITACDAVATGIVRSVEVLGSRATKP 334

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAV 395
           LV+RL+G NV  G R++AE+   ++T +  +DDAA++     
Sbjct: 335 LVVRLDGNNVTEGRRILAEAAHPLVTVVATMDDAAREAAKLA 376


>gi|161528631|ref|YP_001582457.1| succinate--CoA ligase [Nitrosopumilus maritimus SCM1]
 gi|160339932|gb|ABX13019.1| Succinate--CoA ligase (ADP-forming) [Nitrosopumilus maritimus SCM1]
          Length = 368

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 119/396 (30%), Positives = 206/396 (52%), Gaps = 29/396 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+QAK L R+Y + +   +  +++       K L  P +V+K Q+  GGRGK    
Sbjct: 1   MQLLEFQAKELFREYGINLLDSISSTNIEEGRKHAKELGYP-FVIKIQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         +++  T+        G +   + +E  ADI +ELYL
Sbjct: 57  -------GGIQKCQNDDEFEIKYPQVMDLTI-------KGEKARAILLEKMADIKKELYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ ++R+      IAS +GG++IE V     ++I       L  V+ +    +   + L+
Sbjct: 103 SIFLNRSKRCYTIIASDEGGVEIESVKNQIIKEIG------LGEVSDDLAQEVAKEMGLE 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      D    L K   +K+  L+EINPL IM++  +  LD K   DDN+ +RH +++
Sbjct: 157 GKHAEGVVDTLKKLSKLTIEKEAELVEINPLAIMQDDSITALDGKFVTDDNSNFRHPELE 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + ++ SE +    +A++   S + LDG+I  + NGAGL M+T+D++   GG PA FLDVG
Sbjct: 217 KYQEKSEIEE---QAEKSGFSLVELDGDIAVVGNGAGLVMSTLDMLSDNGGKPACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA  + V  A  +I+    VKGIL+N++GGI++  V+ +  L A ++  I++P+  RL+
Sbjct: 274 GGATTESVYEALTLISKLDRVKGILVNLYGGIVKTTVVAEAFLKAYEDNVIDLPVFSRLK 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G   +    ++  S   + + +  ++A    V  VK
Sbjct: 334 GTESEKATEMLQGSRTKIFSTV--EEAINAAVMGVK 367


>gi|312116113|ref|YP_004013709.1| succinate--CoA ligase (ADP-forming) [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221242|gb|ADP72610.1| Succinate--CoA ligase (ADP-forming) [Rhodomicrobium vannielii ATCC
           17100]
          Length = 371

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 125/397 (31%), Positives = 189/397 (47%), Gaps = 27/397 (6%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ EY AK  +L +  +PV  G++  +   A  A   L     V+K+Q+  G RGK   
Sbjct: 1   MNLLEYSAKHMVLSRAGIPVPNGILCLTPEDAAGAYDKLGA--CVIKAQVSTGKRGKS-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GGVR+  S          IL  T+        G  V  V  E+ ADI RE Y
Sbjct: 57  --------GGVRLAFSADEAKEAAAAILALTI-------NGFPVAAVLAEEKADIEREYY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L D  +     + S +GGMDIEE+A+  P+ I +  +D   G +  D A L +    
Sbjct: 102 AAILPDPVTRSPMVLFSEEGGMDIEELAERKPEAIRRFYVDVSAGFSEADAAELAE---- 157

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G        +   LY+AF   D  LLEINPL ++K+  +  LD K   D  A +R  ++
Sbjct: 158 -GPYAAGIAPILVRLYEAFVANDGELLEINPLAVLKDKSIVALDCKFILDPAAAFRQPEL 216

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E EA+   L +I L+GN+  + NGAGL M TMD +  +GG PANF ++
Sbjct: 217 AATAVPERRTRLEKEAEDAGLKFIELEGNVAILANGAGLTMTTMDAVSHFGGRPANFQEI 276

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A +I+ S+  VK +++N  G   R DV+ +G+++A +++   IP+   +
Sbjct: 277 GGEA-YTKAETALRIVLSNPGVKSLVVNFCGAFARTDVMAEGVVAAWEKLTPEIPVFFSI 335

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G        L+  S L       ++DA +  V A +
Sbjct: 336 HGTGSGEAINLVR-SRLGFEPYDFMEDAVKAAVEAAR 371


>gi|85706365|ref|ZP_01037459.1| succinyl-CoA synthetase beta subunit [Roseovarius sp. 217]
 gi|85669138|gb|EAQ24005.1| succinyl-CoA synthetase beta subunit [Roseovarius sp. 217]
          Length = 391

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 117/398 (29%), Positives = 194/398 (48%), Gaps = 16/398 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQ+K LL +Y V V +G    +   A+   K +    YVVK+Q            
Sbjct: 1   MFLAEYQSKELLAQYGVHVPEGRPARTPDEAQRLCKEIDARKYVVKAQ----------IG 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++  +V  + R +LGSTL+T QTGP G  V  V +E   DI +  ++
Sbjct: 51  AGGRGLAGGIRFAATPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D  +G    +AS  GG++ E+ A+          + P    + E   +L   L   
Sbjct: 111 AIALDPETGQPMLLASGAGGVEFEQRARMDEDTAQSCPLPPD---SPESRTALATFLSGV 167

Query: 181 GQARIDGGDL--FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           G        +        AF + DM+L+EINP     +GR   +D+K++ D NA +R  +
Sbjct: 168 GMTEAQEAAITAIFAARLAFTENDMTLIEINPFARTGDGRWMAVDAKVAIDPNAGFRRPE 227

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
              +       + E+ A++HN++ + L+GNIG + NGAGL +AT D+I   GG  ANF+D
Sbjct: 228 FASMVADRPAPADELAAQKHNINLVRLEGNIGVVANGAGLGLATNDLIMDAGGKAANFMD 287

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINI-FGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           +   A    VA   +I+ +D  V  IL+ I  GG+   D + +G+  A  +    +P++ 
Sbjct: 288 IRTTASSMDVARGVEILLADDRVTAILLTIHGGGMTSADTVAEGVNFAYAKATRKLPVIA 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            + G + D G+R++ E  + V +   L  A  ++V   
Sbjct: 348 YISGKHADWGHRILRERKVPVESCDTLSAAVGRVVELA 385


>gi|167044265|gb|ABZ08945.1| putative CoA-ligase [uncultured marine crenarchaeote
           HF4000_APKG5N21]
          Length = 368

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 116/395 (29%), Positives = 202/395 (51%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L ++Y + V   +V   V +     + +  P +V+K+Q+  GGRGK    
Sbjct: 1   MRLLEYQAKELFKEYGIRVPTSIVSKDVESGRKDAEKIGYP-FVIKAQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         ++L  T+        G +   V +E  ++  +E+YL
Sbjct: 57  -------GGIQKCHNEDEFELKYPQVLNMTI-------KGEKTRAVLLEKMSEYEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL ++R+      I+S +GG++IE V     ++I       L  VT +    +   + L 
Sbjct: 103 SLFLNRSKRCYTIISSAEGGVEIESVKNQVIREIG------LGDVTKKVAEEVAKEIGLD 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
             +     D+   L K   +K+  L EINPL+I+K+G +  LD KI  DDN+ +RH ++ 
Sbjct: 157 ANSITYFVDILQKLSKLTIEKEAELTEINPLVILKDGSMMALDGKIMTDDNSNFRHKELT 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + ++ +E + +   A++   S + LDGNI  + NGAGL M+T+D++   GG  A FLDVG
Sbjct: 217 KYQEKTELEKK---AEESGFSLVELDGNIAVIGNGAGLVMSTLDMLTDNGGKAACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  + V  A  +I+   +VK +L+N++GGI++  ++    L A  +  I +P+  RL 
Sbjct: 274 GTATTESVYEALTLISRMKNVKAVLVNLYGGIVKTTIVASAFLQAYDDKIIILPVFARLM 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           GA  +    ++ +S      +  +++A  K+V  V
Sbjct: 334 GAESEKSKDMLKDS--ETQLSPSIEEAINKVVMEV 366


>gi|126178791|ref|YP_001046756.1| succinyl-CoA synthetase, beta subunit [Methanoculleus marisnigri
           JR1]
 gi|125861585|gb|ABN56774.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Methanoculleus
           marisnigri JR1]
          Length = 361

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 132/394 (33%), Positives = 209/394 (53%), Gaps = 37/394 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK +  +Y +PV KGVVI +     + +  L G + V+K+Q+  GGRGK    
Sbjct: 1   MKLLEYEAKRVFAEYGIPVPKGVVIRAPEEVAAHLPDLGGGV-VLKAQVDVGGRGKAGGV 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                      + +   +     RE+    +        G  V  +  E+   I  E Y+
Sbjct: 60  -----------LMADRATAAETARELFSREI-------KGVPVGEILAEERLAIEHEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL 179
           S+ VDR+S     + +  GG++IE++A++    + ++++ PL+  +    +  L      
Sbjct: 102 SIAVDRSSRQPVVLFADAGGVEIEKMAQEDESAVRRVVVSPLLRDIPPFLMRELL----- 156

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A  +   +   LY  F  KD  L EINPL+    G +   D+K+  DDNAL R   I
Sbjct: 157 -GGAPKELAPVINCLYHVFQGKDAMLAEINPLVTTPRG-VYAADAKLIVDDNALARQ-GI 213

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD+SE   RE EA++H  SY+ LDG+IG + NGAGL M+T+D+I+ Y G  ANFLDV
Sbjct: 214 AVNRDLSE---REREAEKHGFSYVELDGSIGVIGNGAGLTMSTLDLIEFYNGRAANFLDV 270

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGADQ++V  A +++ S   V  I++N+ GGI RCD + KGI++A     +   +++R+
Sbjct: 271 GGGADQERVMHAVRLVASMPGVNVIVVNLLGGITRCDEVAKGIIAA----GVTPTVIVRM 326

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
            G N + G RL+A  G  ++    +D A +  + 
Sbjct: 327 AGTNEEEGRRLLAGCGYRML--ESMDAAVKAAME 358


>gi|284173632|ref|ZP_06387601.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus solfataricus 98/2]
 gi|261600984|gb|ACX90587.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus solfataricus 98/2]
          Length = 337

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 141/397 (35%), Positives = 217/397 (54%), Gaps = 60/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  G+V +        IK   G   VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGIVTTEP------IKW--GGKAVVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++                V    VE+     +E Y 
Sbjct: 49  ------RGLVRVTDDVYNTILELKKLG---------------VEKFLVEEFVPHEKEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR S     + S +GG+D+E+      + + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRESAEPMLVLSREGGIDVEQA-----KDVKKMIIPLERGVRSYDIIEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F + D  L+EINPL +  +GRL  LDSK+  +DNAL+RH D+ 
Sbjct: 143 G-----LGQIIQGLYKLFVEYDAELVEINPLALTSDGRLLALDSKVILEDNALFRHEDLL 197

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     +E+  ++ + SY+ LDG+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 198 ----------KELGRQEIHDSYVELDGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++ V  +   + S+  VK ++INI+GGI RCD +  GI+ A+KE  I  P+ +RL 
Sbjct: 248 GGASREHVKESVLKVGSNPKVKKVVINIYGGITRCDEVALGIVDALKE--IKKPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ E+G+NV      DD  + I  AV+ 
Sbjct: 306 GTNEELGKKILRENGVNVY-----DDVLKMIGDAVRS 337


>gi|258404678|ref|YP_003197420.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense
           DSM 5692]
 gi|257796905|gb|ACV67842.1| succinyl-CoA synthetase, alpha subunit [Desulfohalobium retbaense
           DSM 5692]
          Length = 696

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 125/388 (32%), Positives = 199/388 (51%), Gaps = 23/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M  +E+Q+K+L +   +PV +G +++      +  +    P +++K+Q+  GGRGK    
Sbjct: 1   MKCNEHQSKSLFKSCGIPVPQGDLVTP--EMAAVYRPDFAPPFMLKAQVLRGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++L+ +   ++EI    +  +        V  V VE  A I RE YL
Sbjct: 56  -------GGIRKVTALQDLPGTLKEIFDMRIGDEA-------VPLVRVEPAAGIAREFYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ + R           +GG+DIE    D    +    +DP +G+ +  V S    L + 
Sbjct: 102 SISIQRALAAPVLTVGREGGVDIEASGADN---LLIQPLDPCLGLRAHHVRSAFFHLGVD 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   L   LY+A   + ++L EINPLI+  +     LD K+  DDNA+    ++ 
Sbjct: 159 NDHWKDFEALVHRLYEAVSHRGVTLAEINPLILTDHDHWLALDGKVELDDNAVELQPELA 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L        +E  A+   LSY  L+G +G MVNGAGLAMATMD++   G   ANFLDVG
Sbjct: 219 SLYQPEHATDQENTARNAGLSYHTLNGRVGLMVNGAGLAMATMDMLNFAGLPAANFLDVG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V AA  ++  D  V+ +LINIFGGI+ C  +   +++A++  ++  PLV+R +
Sbjct: 279 GGADEERVGAALDLLFGDQRVQTVLINIFGGILSCSKVASALIAALEHREVVKPLVVRFD 338

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDA 387
           G   + G + +  +G   V     L DA
Sbjct: 339 GHGAEEGRQRLRHAGHATVTVVETLQDA 366


>gi|218659245|ref|ZP_03515175.1| succinyl-CoA synthetase subunit beta [Rhizobium etli IE4771]
          Length = 288

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 162/266 (60%), Positives = 205/266 (77%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV +  V   E+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 17  MNIHEYQAKALLKGYGAPVAEGVAVLKVEEVEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 76

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY 
Sbjct: 77  ELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYC 136

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SLLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++   L L+
Sbjct: 137 SLLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAISKALALE 196

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G A  D   LFP LYKAF +KDM+LLE+NPLI+MK+G LRVLD+K+SFD NAL+RH D+ 
Sbjct: 197 GAAAEDAKSLFPALYKAFNEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVT 256

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD 266
            LRD +EED++     Q +L+Y+ALD
Sbjct: 257 TLRDETEEDAKGNRGLQVDLAYVALD 282


>gi|154150270|ref|YP_001403888.1| succinyl-CoA synthetase, beta subunit [Candidatus Methanoregula
           boonei 6A8]
 gi|153998822|gb|ABS55245.1| succinyl-CoA synthetase, beta subunit [Methanoregula boonei 6A8]
          Length = 361

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 133/396 (33%), Positives = 209/396 (52%), Gaps = 37/396 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK L  +  + V KG+++         +  +P  + V K+Q+  GGRGK    
Sbjct: 1   MKLLEYEAKQLFSEEGIRVPKGILVGKHEEILLHMDAIPAKVAV-KAQVDVGGRGKAGGV 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                      + +   +VI   R++  +T+        G  V  + +E+  +I  E Y+
Sbjct: 60  -----------LMADRDTVIETARKLFNTTI-------KGLPVQRILIEERLEIRHEYYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLEL 179
           S+ +DRT      + +  GG+DIEE AK   + I  +   PL   V    +  LC     
Sbjct: 102 SITIDRTKKQPVILFAETGGIDIEETAKTDKKAIRSISFCPLLADVPGFLLRELC----- 156

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A ++       LY  FC KD  L EINPL+    G +   D+K+  DDN+L R   I
Sbjct: 157 -GDAPVEIQATVNRLYHVFCHKDALLAEINPLVTTPAG-VYAADAKLIIDDNSLARQ-GI 213

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              RD++E   RE EA++H  SY+ L GNIG + NGAGL MAT+D+I+ YGG  A+FLDV
Sbjct: 214 VLNRDLTE---REREAEKHGFSYVELQGNIGVIGNGAGLTMATLDLIEYYGGRAADFLDV 270

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGAD ++V  A ++++   +VK I++N+ GGI RCD + +GI+++     +  P+++R+
Sbjct: 271 GGGADSERVMHAVRLVSGVPTVKVIVVNLLGGITRCDEVARGIIAS----GVPEPVIVRI 326

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G N + G +L+AE G  ++    +D   +K V   
Sbjct: 327 AGTNAEEGRKLLAEKGYEML--DTMDLVVKKAVEVA 360


>gi|323473766|gb|ADX84372.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus REY15A]
 gi|323476416|gb|ADX81654.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus HVE10/4]
          Length = 337

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 144/397 (36%), Positives = 221/397 (55%), Gaps = 60/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S        I+       VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEP------IRWQG--KAVVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++                V    VE+     +E Y 
Sbjct: 49  ------RGLVRVTEDVYNTILELKKLG---------------VEKFLVEEFVPHEKEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +G    + S +GG+D+E+      + + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETGEPMLVLSREGGIDVEQA-----KDVKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 G-----LGQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ E+G+NV      DD  + I  AV+ 
Sbjct: 306 GTNEELGKKILRENGVNVY-----DDVLKMIGDAVRS 337


>gi|331667094|ref|ZP_08367959.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
 gi|331065450|gb|EGI37343.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
          Length = 253

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 134/252 (53%), Positives = 181/252 (71%)

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +A++ P  I K+ +DPL G        L   L L+G+       +F  L   F ++D++L
Sbjct: 1   MAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLAL 60

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINPL+I K G L  LD K+  D NAL+R  D++E+RD S+ED RE +A Q  L+Y+AL
Sbjct: 61  IEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVAL 120

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVGGGA +++V  AFKII SD  VK +L
Sbjct: 121 DGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVL 180

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NIFGGI+RCD++  GI+ AV EV +N+P+V+RLEG N ++G + +A+SGLN+I A  L 
Sbjct: 181 VNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLT 240

Query: 386 DAAQKIVHAVKG 397
           DAAQ++V AV+G
Sbjct: 241 DAAQQVVAAVEG 252


>gi|227826683|ref|YP_002828462.1| succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.14.25]
 gi|238618770|ref|YP_002913595.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.4]
 gi|227458478|gb|ACP37164.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.14.25]
 gi|238379839|gb|ACR40927.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.4]
          Length = 337

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 143/397 (36%), Positives = 220/397 (55%), Gaps = 60/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S        I+       VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEP------IRWQG--KAVVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++                V    VE+     +E Y 
Sbjct: 49  ------RGLVRVTEDVYNTILELKKLG---------------VEKFLVEEFVPHEKEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG+D+E+      + + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETAEPMLVLSREGGIDVEQA-----KDVKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 G-----LGQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ E+G+NV      DD  + I  AV+ 
Sbjct: 306 GTNEELGKKILRENGVNVY-----DDVLKMIGDAVRS 337


>gi|167042621|gb|ABZ07343.1| putative CoA-ligase [uncultured marine crenarchaeote
           HF4000_ANIW133K13]
          Length = 370

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 118/395 (29%), Positives = 204/395 (51%), Gaps = 29/395 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L ++Y++ V   +  +++       K +  P +V+K+Q+  GGRGK    
Sbjct: 1   MRLLEYQAKELFKEYDIKVPDSISSNNIEKGRKDAKKIGFP-FVIKAQVPVGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +         +ILG T+        G +   + +E  ++  +E+YL
Sbjct: 57  -------GGIQKCHNEDEFELKYPQILGMTI-------KGEKTRAILLEKMSEYEKEIYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL +DR+      I+S +GG++IE V     +++       L  V+ +    +   + L 
Sbjct: 103 SLFLDRSKRCYTVISSAEGGVEIESVKNQVIREVG------LGDVSKKIAEEIAVKIGLD 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            ++     D+   L K   +K+  L EINPL+I+ +G +  LD KI  DDN+ +RH ++ 
Sbjct: 157 EKSVTYFVDILQKLSKLTVEKEAELTEINPLVILNDGSMVALDGKIMTDDNSNFRHGELA 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           + R+ ++ + +   A++   S + LDGNI  + NGAGL M+T D++   GG PA FLDVG
Sbjct: 217 KYREQTKLEEK---AEKSGFSLVELDGNIAVVGNGAGLVMSTFDMLADNGGKPACFLDVG 273

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +  V  A  +I+    VK IL+N+FGGI++  ++    + A     I++P+  RL 
Sbjct: 274 GGATEKSVYEALTLISKMKKVKAILVNLFGGIVKTTIVASAFIKAYDNKLIDLPVYARLM 333

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           GA  D    ++ ++   + T++  + A   IV  V
Sbjct: 334 GAESDKSKEMLKDTKTKMFTSV--EQAINGIVMEV 366


>gi|229583847|ref|YP_002842348.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.27]
 gi|228018896|gb|ACP54303.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus M.16.27]
          Length = 337

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 143/397 (36%), Positives = 220/397 (55%), Gaps = 60/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S        I+       VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEP------IRWQG--KAVVKSQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G VRV   + + I +++++                V    VE+     +E Y 
Sbjct: 49  ------RGLVRVTEDVYNTILELKKLG---------------VEKFLVEEFIPHEKEFYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG+D+E+      + + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETAEPMLVLSREGGIDVEQA-----KDVKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 G-----LGQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  ++ R+        SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 197 -LKELGRQEVRD--------SYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ E+G+NV      DD  + I  AV+ 
Sbjct: 306 GTNEELGKKILRENGVNVY-----DDVLKMIGDAVRS 337


>gi|15899224|ref|NP_343829.1| succinyl-CoA synthetase, beta subunit (sucC) [Sulfolobus
           solfataricus P2]
 gi|227829323|ref|YP_002831102.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           L.S.2.15]
 gi|229578096|ref|YP_002836494.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.G.57.14]
 gi|229583308|ref|YP_002841707.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.N.15.51]
 gi|284996682|ref|YP_003418449.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus L.D.8.5]
 gi|13815784|gb|AAK42619.1| Succinyl-CoA synthetase, beta subunit (sucC) [Sulfolobus
           solfataricus P2]
 gi|227455770|gb|ACP34457.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           L.S.2.15]
 gi|228008810|gb|ACP44572.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.G.57.14]
 gi|228014024|gb|ACP49785.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus
           Y.N.15.51]
 gi|284444577|gb|ADB86079.1| Succinate--CoA ligase (ADP-forming) [Sulfolobus islandicus L.D.8.5]
          Length = 337

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 141/397 (35%), Positives = 213/397 (53%), Gaps = 60/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K+L ++  +PV  GVV S        I+       VVKSQ+  G RGK    
Sbjct: 1   MKLYEYEGKSLFKRVGIPVPNGVVTSEP------IRWQG--KAVVKSQLLEGARGKRGLV 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +                      +I  + L  K+ G     V    VE+     +E+Y 
Sbjct: 53  RVT--------------------EDIYNTILELKKLG-----VEKFLVEEFVPHEKEIYA 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR +     + S +GG+D+E+      + + K++I    GV S D+      L ++
Sbjct: 88  SVLLDRETAEPMLVLSREGGIDVEQA-----KDVKKMIIPLERGVRSYDIVEAEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   LYK F D D  L+EINPL +  +GR+  LDSK+  +DNALYRH D+ 
Sbjct: 143 G-----LGQIIQGLYKLFVDYDAELVEINPLALTNDGRILALDSKVILEDNALYRHEDLL 197

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     +E+  ++   SY+ L+G+IG + NGAGL MA+MD++KL GG PANFLDVG
Sbjct: 198 ----------KELGRQEVRDSYVELEGDIGIIGNGAGLTMASMDLVKLNGGNPANFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA+++ V  +   + S+  VK I+INI+GGI RCD +  GI+ A+KEVK   P+ +RL 
Sbjct: 248 GGANREHVKESVLKVGSNPRVKKIVINIYGGITRCDEVALGIIDALKEVK--KPIFVRLL 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N ++G +++ E+G+NV      DD  + I  AV+ 
Sbjct: 306 GTNEELGKKILRENGVNVY-----DDVLKMIGDAVRS 337


>gi|149202194|ref|ZP_01879167.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
 gi|149144292|gb|EDM32323.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
          Length = 391

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 118/398 (29%), Positives = 192/398 (48%), Gaps = 16/398 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQ+K LL +Y V    G    S   A+   K +    YVVK+Q            
Sbjct: 1   MFLAEYQSKELLAQYGVLAPDGRPARSPDEAQRLCKEIDARKYVVKAQ----------IG 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++  +V  + R +LGSTL+T QTGP G  V  V +E   DI +  ++
Sbjct: 51  AGGRGLAGGIRFAATPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++  D  +G    +AS  GG++ E+ A+            PL   + E  A +   L   
Sbjct: 111 AIAFDPETGQPMLLASGAGGVEFEQRARMDEDTAQSC---PLPSDSPEARAKIAPFLTGV 167

Query: 181 GQARIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           G +      +        AF + DM+L+EINP     +GR   +D+K++ D NA +R  +
Sbjct: 168 GISEAQDAAIDAIFAARLAFTENDMTLIEINPFARTTDGRWMAVDAKVAIDPNAGFRRPE 227

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
              +       + E+ A++HN++ + L+GNIG + NGAGL +AT D+I   GG  ANF+D
Sbjct: 228 FASMVADRPAPADELAAQKHNINLVRLEGNIGVVANGAGLGLATNDMITDAGGKAANFMD 287

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINI-FGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           +   A    VA   +I+ +D  V  IL+ I  GG+   D + +G+  A  +    +P++ 
Sbjct: 288 IRTTASSMDVARGVEILLADDRVSAILLTIHGGGMTSADTVAEGVNFAYAKATRKLPVIA 347

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            + G + D G+R++ E  + V +   L  A  ++V   
Sbjct: 348 YISGKHADWGHRILRERKVPVESCDTLSAAVGRVVELA 385


>gi|238490800|ref|XP_002376637.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
 gi|220697050|gb|EED53391.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
           NRRL3357]
          Length = 339

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 119/301 (39%), Positives = 168/301 (55%), Gaps = 7/301 (2%)

Query: 35  IKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITK 94
            K   G   V+K+QI AGGRGKG   +  +D KGGVR+  S      +   +LG +L+TK
Sbjct: 27  AKGTSGAPSVMKAQILAGGRGKG---KYNSDGKGGVRIVDSPDEAFENASNMLGYSLVTK 83

Query: 95  QTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           QT P G  VN +Y+    DI +E Y+++  DR       + S  GG++IE        ++
Sbjct: 84  QTPPDGLPVNKLYIYKSVDIAQEFYVAITFDRARYKPVLLMSDDGGVNIES----NVNQL 139

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            +   +   G+T E  A +                +   L K F +KD +LLE+NP +  
Sbjct: 140 QRFWFNLSTGITPEIAAYIEAQFGFSDDDMGMVTHILRQLVKLFREKDATLLELNPFVRT 199

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
             G L  +D+K +FDD+A +R  ++  L + S E+  E EA Q  LSYI LDGNIG +VN
Sbjct: 200 TEGSLICIDAKFNFDDSAKFRQPELVSLVEHSAEEKDEYEASQLGLSYIRLDGNIGVIVN 259

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAMAT D++ LYGG  ANFLD+GGGA ++ ++ AF I+  DS  K + INI+GG  R
Sbjct: 260 GAGLAMATNDLVTLYGGNCANFLDIGGGATKETLSNAFSILQGDSRTKALFINIYGGRKR 319

Query: 335 C 335
            
Sbjct: 320 T 320


>gi|290559062|gb|EFD92436.1| Succinate--CoA ligase (ADP-forming) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 366

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 122/392 (31%), Positives = 205/392 (52%), Gaps = 31/392 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E++ K + + Y + +  G +I S    +      P    VVK+Q+ +G RG      
Sbjct: 3   DLLEHEGKKIFKSYGISIPSGYIIHSFKEVKK-----PEKECVVKAQVPSGHRGIN---- 53

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV      + ++  I +I             G +     VE+     +E+Y+ 
Sbjct: 54  ------GGVVKVKEKEEILKAINKI-------SSINFNGFKATSFLVEEMVPHTKEVYVG 100

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L +DR+  M   I S  GG+DIE V  +   +I K  +D L+G+ +       + + L  
Sbjct: 101 LTLDRSRKMPVLILSPSGGVDIEHVPAN---QIKKFYLDILLGMQNYIKREAFNFIGLSE 157

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
             R     L   L+  F  +D  L+EINPL +  +G L  LDSK++ +D+AL+RH + Q 
Sbjct: 158 NYREIFYTLMERLWNVFTGEDCELVEINPLAVTSSG-LVALDSKVTIEDDALFRHKNYQ- 215

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            ++ +  D  E EAK+ +++++ L G+IG + NGAGL +AT+D IKL GG+  +FLD+GG
Sbjct: 216 -KEYTSLDPLEAEAKRKDIAFVRLGGDIGLIANGAGLTLATIDQIKLAGGSAGDFLDLGG 274

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
             D +KVA A  ++   +  K + INIFGG+ + D + +GI+ A+K+   N  +++RL G
Sbjct: 275 TDDPEKVAEAINLV-KKAKPKVVFINIFGGVTKADTVAEGIIKAIKDSDTNPKIIVRLMG 333

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
            N   G +L+  +G++  T  D+ +A +K V 
Sbjct: 334 VNNQRGIQLLKANGIDAFT--DISEAVKKAVE 363


>gi|115525207|ref|YP_782118.1| succinate--CoA ligase (ADP-forming) [Rhodopseudomonas palustris
           BisA53]
 gi|115519154|gb|ABJ07138.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 375

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 118/396 (29%), Positives = 192/396 (48%), Gaps = 23/396 (5%)

Query: 1   MNIHEYQAKAL-LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+ E+ AK L L    +      V      A +A+  L     ++K+Q+  G RGK   
Sbjct: 1   MNLLEHAAKTLVLALAGIATLPSQVCHKPEDAAAAVAVL--SPAMIKAQVPTGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG+R   + +   +  R+IL  T+        G  V+ V VE  ADI  E Y
Sbjct: 57  --------GGIRPADTPEEARAVTRDILAMTI-------DGQDVSSVLVEQRADIADEFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L D    +   + S +GG++IE  A   P  + +  +D L G    +       L+L
Sbjct: 102 AAVLCDTARRLPVVLFSPEGGVEIETTASRSPASLRRYEVDVLRGFGRSEAELFVTGLDL 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G A     D+   LY+AF D D  L+EINPL ++ + R+  LD+K++ D+ A +R   +
Sbjct: 162 RG-ADTAVVDVLVRLYRAFVDSDAELVEINPLAVLTDRRVVALDAKVTLDEAAAFRQPTL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E    +  L ++  DGN+G + NGAGL M TMD+I+ +GG PANFL++
Sbjct: 221 AAAAAPEPATELERRGAEAGLKFLQFDGNVGVLANGAGLTMTTMDVIRHFGGRPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K   A  ++ +   VK +++N  G   R DV+ +G++ A + +K ++P+   +
Sbjct: 281 GGEA-YTKAEIALGLVLAHPGVKSLVVNFCGAFARTDVMAEGVVRAWQTLKPSLPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            G   +   RL+ E  L +     ++DA +  V A 
Sbjct: 340 HGTGEEEAIRLVREQ-LGIEPFDLMEDAVKAAVEAA 374


>gi|307354405|ref|YP_003895456.1| succinyl-CoA synthetase subunit beta [Methanoplanus petrolearius
           DSM 11571]
 gi|307157638|gb|ADN37018.1| succinyl-CoA synthetase, beta subunit [Methanoplanus petrolearius
           DSM 11571]
          Length = 369

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 131/403 (32%), Positives = 203/403 (50%), Gaps = 43/403 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVH------AAESAIKTLP-GPLYVVKSQIHAGG 53
           M + EY+AK + +KY +PVAKG V+             S IK    G   V+K+Q+  GG
Sbjct: 1   MKLLEYEAKDIFKKYGIPVAKGFVVKKTDCDGTGGKINSGIKECELGDEVVIKAQVEVGG 60

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK               V             +    +        G  V+ + VE+   
Sbjct: 61  RGKAGGV-----------VICPAGDAPEKAAAMFAKDI-------KGVLVDTILVEEKLP 102

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVAS 172
           I  E Y+S+ +DR+      + S +GG++IEE AK+ P  + ++ + P L  +    +  
Sbjct: 103 ITGEYYVSITLDRSKKAPVILFSAEGGVEIEETAKNNPGALHRVRVSPMLDDIPDFMMRE 162

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L         A  +   +  +LY+ FC  D  L EINPL+    G +   D+KI  DDNA
Sbjct: 163 LVR------DAPKELAPVIKSLYRVFCKSDAILAEINPLVTTGKG-VYAADAKIIVDDNA 215

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           L R   I   RD++E   RE  A+    SY+ L+GNIG + NGAGL M+T+D+I+ +GG 
Sbjct: 216 LGRQ-GITVNRDLTE---RERLAEDLGFSYVELEGNIGVIGNGAGLTMSTLDMIEYFGGK 271

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLDVGGGAD+ +V +A K+++    VK I++N+ GGI RCD +  GI+ A     ++
Sbjct: 272 AANFLDVGGGADRGRVCSAVKLVSGMDGVKVIVVNLLGGITRCDEVAAGIVEA----GVS 327

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
             +V+RL G N   G ++++E G  ++    +++  +  V   
Sbjct: 328 QQVVVRLAGTNEAEGKKILSEKGYRML--GSMEEVVKFAVEEA 368


>gi|269986365|gb|EEZ92662.1| Succinate--CoA ligase (ADP-forming) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 366

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 126/395 (31%), Positives = 202/395 (51%), Gaps = 31/395 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++  ++ K + + Y + V  G +I S   A+      P    VVK+Q+  G RG      
Sbjct: 3   DLLVHEGKKIFKSYGINVPSGYIIHSFKEAKK-----PEKESVVKAQVPTGHRGIN---- 53

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV      + +   I EI             G +     VE+     +E+Y+ 
Sbjct: 54  ------GGVVKVKDKEEISKAIGEI-------SSIDFNGFKAESFLVEEMVPHSKEIYVG 100

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L +DR+  M   I S  GG+DIE V  +   +I K  +D L+G+         + + L  
Sbjct: 101 LTLDRSKKMPILIISPSGGVDIEHVPAN---QIKKFYLDILLGMQGYVKREAFNFIGLSE 157

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
             R    +L  +L+K F  +D  L+E+NPL +  +G L  LDSK++ +D+AL+RH + Q 
Sbjct: 158 NYREVFYNLMESLWKVFTGEDCELVEVNPLAVTSSG-LVALDSKVTIEDDALFRHKNYQ- 215

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            ++ +  D  E EAK+  ++++ L G+IG + NGAGL +AT+D IKL GG   +FLD+GG
Sbjct: 216 -KEYTSSDPLEAEAKRKGIAFVRLGGDIGLIANGAGLTLATIDQIKLAGGNAGDFLDLGG 274

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
             D +KVA A  ++   +  K + INIFGG+ + D + +GI+ A+K    NI +V+RL G
Sbjct: 275 TDDPEKVAEAINLV-KKAKPKALFINIFGGVTKADTVAEGIVKAIKGSDTNIRIVVRLMG 333

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            N   G +L+  +G  +    D+ +A +K V   K
Sbjct: 334 VNSQRGIQLLKSNG--IEAFTDISEAVKKAVEVSK 366


>gi|218904965|ref|YP_002452799.1| succinyl-CoA synthetase beta chain [Bacillus cereus AH820]
 gi|218538546|gb|ACK90944.1| succinyl-CoA synthetase beta chain [Bacillus cereus AH820]
          Length = 233

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 105/241 (43%), Positives = 143/241 (59%), Gaps = 10/241 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ KA+LR Y V V  G V  +V  A  A K L   + VVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  +L  V +    ILG+TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            L++DR +  V  +AS +GG +IEEVA+  P+KIFK  IDP +G+       +   + + 
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIP 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           LY+AF +KD S+ EINPL+   +G++  LD+K++FD NALYRH DI 
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIF 230

Query: 241 E 241
            
Sbjct: 231 R 231


>gi|242008394|ref|XP_002424991.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
 gi|212508620|gb|EEB12253.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
           corporis]
          Length = 297

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 120/275 (43%), Positives = 166/275 (60%), Gaps = 16/275 (5%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           ++G  L+TKQTG  G   N V V +     +E Y +++++R+      IAS++GG++IE+
Sbjct: 1   MIGQYLVTKQTGEKGRICNSVMVTERKFPRKEYYFAVMMERSFAGPVIIASSEGGVNIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           VA + P  I    +D   G+T E    +   + L  +      D+   LY    +KD  L
Sbjct: 61  VAAENPNAIIYEPVDIKKGLTEEQAKKITSAVGL-DEEMSTTVDMLMKLYNLAMEKDALL 119

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +E+NP     NG    LD+K  FDDNA +R  ++ +LRD S+E  R              
Sbjct: 120 VEVNPYAEDVNGGFFCLDAKFRFDDNADFRQKELFDLRDWSQEIRRR------------- 166

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
             +IGC+VNGAGLAMATMDIIKLYGG PANFLDVGGGA    V  AFKIITSD  V  IL
Sbjct: 167 --DIGCLVNGAGLAMATMDIIKLYGGEPANFLDVGGGATASAVKEAFKIITSDPKVHAIL 224

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           +NIFGGIMRCDV+ +GI++A KE+ + +P+++RL+
Sbjct: 225 VNIFGGIMRCDVIAEGIIAAAKELNLVLPIIVRLQ 259


>gi|269986562|gb|EEZ92845.1| Succinate--CoA ligase (ADP-forming) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 371

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 120/395 (30%), Positives = 206/395 (52%), Gaps = 31/395 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E++ K L + Y + +  G +I S        +       V+K+Q+  G RG      
Sbjct: 3   DLLEFEGKKLFKSYGIEIPSGKLIHSTSDLNDFKEE-----QVIKAQVPTGHRG------ 51

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV    + +  I    +I             G +     VE      +ELY++
Sbjct: 52  ----VNGGVVKFKNKEEFILAFNKI-------SLLKFNGFKPTAFLVEKAIKHNKELYVA 100

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L +DR +     + S+ GG+DIE++ K    +I  + +D  +G+           + L  
Sbjct: 101 LTLDRNNKSPVLLVSSNGGVDIEKIPKS---RIKSIDLDIFMGMQEYIKRQALKFIGLDY 157

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           + +     L  +++K F +KD  L+EINPL +  + +L  LDSKIS +D++L+RH + + 
Sbjct: 158 KYKEQFYALLDSMWKIFTEKDAELVEINPLAVT-DTQLIALDSKISIEDDSLFRHEEYK- 215

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
            RD    D  E++AK+  +S++ L+GNIG + NGAGL +AT+D IKL GG   +FLD+GG
Sbjct: 216 -RDEYSSDELEMKAKKKGISFVRLNGNIGLIANGAGLTLATIDQIKLAGGMAGDFLDLGG 274

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
             D  +VA A +++  DS+ K + INIFGG+ + D + +GI+ A+ ++ I   +V+RL+G
Sbjct: 275 TDDPARVAEAIELV-KDSNPKVLFINIFGGVTKADTVAEGIVQAINKLNITFKIVVRLKG 333

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            N   G  L+ ++   + +  D+ +A Q++V   K
Sbjct: 334 FNEAKGKELLKKN--EIDSFTDMGEAIQEVVKLAK 366


>gi|256829615|ref|YP_003158343.1| succinyl-CoA synthetase subunit alpha [Desulfomicrobium baculatum
           DSM 4028]
 gi|256578791|gb|ACU89927.1| succinyl-CoA synthetase, alpha subunit [Desulfomicrobium baculatum
           DSM 4028]
          Length = 689

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 125/398 (31%), Positives = 197/398 (49%), Gaps = 26/398 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +K L  +  +PV  G ++           +   P +V+KSQ+ +GGRGK    
Sbjct: 1   MKLNEHNSKQLFHEAGIPVPLGALLGPGDEP---APSFALP-WVLKSQVLSGGRGKA--- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R+  +L+ V +++ +I   T+        G +V  V +E  A   RE+YL
Sbjct: 54  -------GGIRMADTLEQVRTELAQIFSLTI-------KGEKVRLVRIEPKAAYTREIYL 99

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR S      A   GGMDIE      PQ +      P  G+    + ++   L L 
Sbjct: 100 SITLDRQSRSFCITAGRFGGMDIESCD---PQTLLIEHAAPDTGLAPFQIRNIFFHLRLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L  NL+       + L EINPL++ ++G+L  LD K+  D + +     + 
Sbjct: 157 KELMKAFSSLLSNLFDCCLRHRLLLAEINPLVLTEDGQLLALDGKVEIDGHRVGIDPSLN 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              + +     E  +++  LSY  LDG +G MVNGAGLAMA+MDI+   G   ANFLD+G
Sbjct: 217 RFFEAAHLSDEENRSREAALSYHRLDGYVGLMVNGAGLAMASMDILNYSGLEAANFLDLG 276

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD   +  A  I+  DS V+ + INIFGGI+ C  + + +L A+   +   P+V+R  
Sbjct: 277 GGADSTAMRTALDILFDDSRVEMVFINIFGGILSCHKVAESMLEALDGQEPRKPIVVRFA 336

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKG 397
           G     G  L+ ++ LN +    DL  A +  +  +KG
Sbjct: 337 GNGSADGLSLLRKAALNGLHLCPDLTTA-RAALEKLKG 373


>gi|13235368|emb|CAC33661.1| Succinyl-CoA synthetase beta subunit [Rickettsia rickettsii]
          Length = 248

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 128/248 (51%), Positives = 172/248 (69%)

Query: 149 DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI 208
             P+KI K  +DP  G+    +  +   L  +        ++  ++Y AF + D + +EI
Sbjct: 1   KTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEI 60

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
           NPLI+  +G L  LD+KI+FDDN L RH +I  +RD  EED  E  A    LSY+ +DGN
Sbjct: 61  NPLIVNSDGNLLALDAKITFDDNGLLRHPNITAMRDHDEEDPLETRAANAGLSYVKMDGN 120

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           IGCMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V  A KII SD +V+GIL+NI
Sbjct: 121 IGCMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERVKEALKIILSDKAVQGILVNI 180

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           FGGIMRCD++ +GI++A K++ I +PLV+RL G NV+ G  +++ SGL +I A DL DAA
Sbjct: 181 FGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLAGTNVEKGKEILSNSGLEIIPAHDLADAA 240

Query: 389 QKIVHAVK 396
            KIV A++
Sbjct: 241 NKIVEAIR 248


>gi|218508840|ref|ZP_03506718.1| succinyl-CoA synthetase subunit beta [Rhizobium etli Brasil 5]
          Length = 259

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 170/259 (65%), Positives = 210/259 (81%)

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAF 198
           GGMDIE VA D P+KI  + IDP  GVT+ DVA +   L+L G A  D   LFP LYKAF
Sbjct: 1   GGMDIEAVAHDTPEKIQTIAIDPETGVTAADVAKISSALKLDGAAAEDAKSLFPLLYKAF 60

Query: 199 CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQH 258
            +KDMSLLEINPLI+MKNG LRVLD+K+SFD NAL+RH D++ LRD +EED++EIEA + 
Sbjct: 61  NEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVRALRDETEEDAKEIEASKW 120

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSD 318
           +L+Y+ALDGNIGCMVNGAGLAMATMDIIKLYG  PANF DVGGGA ++KVAAAFKIIT+D
Sbjct: 121 DLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVAAAFKIITAD 180

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
             V+ IL+NIFGGIM+CDV+ +G+++AVKEV   +PLV+RLEG NV++G +++ ESGL +
Sbjct: 181 PKVESILVNIFGGIMKCDVIAEGVIAAVKEVGFKVPLVVRLEGTNVELGKKILNESGLAI 240

Query: 379 ITAIDLDDAAQKIVHAVKG 397
             A DLDDAA+KIV A+ G
Sbjct: 241 TAADDLDDAAKKIVAAING 259


>gi|322699844|gb|EFY91603.1| succinyl-CoA synthetase beta chain [Metarhizium acridum CQMa 102]
          Length = 313

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 110/312 (35%), Positives = 177/312 (56%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +L   L+TK  G  G  V  +YV + A      YL++ +DR +   A I S +GG++++ 
Sbjct: 1   MLNQRLLTKDNGTDGHLVEKLYVAEAATCDSHWYLAMTIDRENYQPAIIVSKEGGVELDV 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +  + P  +F        G+ +  V  +   L    Q       +   +Y  F D++ + 
Sbjct: 61  LISEQPDSLFTFGFGMSEGINNALVQDIQQRLGTTDQEMAKLTHILTQMYSIFRDREATH 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LEINPL    +G    L++  +FD  A  R  ++  LRD ++E   E+EA++H L Y+ +
Sbjct: 121 LEINPLGRSLDGSFTSLNAIFTFDKAAEQRQEEVSALRDKTQEVPDEVEAEKHGLVYVRM 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DG+IG +VNGAGLAMAT D I  +GGA ANFLD GG A ++ +  AF+IIT D  VK IL
Sbjct: 181 DGDIGNVVNGAGLAMATNDAIGFHGGASANFLDAGGKATKETMIQAFRIITRDERVKAIL 240

Query: 326 INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
           +NI+GGI +CD++ + I+ A  E+ I +P+V+RL+G N + G +++ ++ L ++   D  
Sbjct: 241 VNIYGGITQCDMIAESIIGATSELDIRVPMVVRLQGTNSEKGLKMLEDANLGLVVESDFG 300

Query: 386 DAAQKIVHAVKG 397
            AA++ V   + 
Sbjct: 301 QAAKRAVELAES 312


>gi|13235376|emb|CAC33598.1| Succinyl-CoA synthetase beta subunit [Rickettsia montanensis]
          Length = 249

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 127/248 (51%), Positives = 172/248 (69%)

Query: 149 DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI 208
             P+KI K  +DP  G+    +  +   L  +        ++  ++Y AF + D + +EI
Sbjct: 1   KTPEKIIKFSVDPATGLQDFHMRGIAYELGFKDNQAKQMKEIVKSVYNAFIETDAAQIEI 60

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
           NPLI+  +G L  LD+KI+FDDN L++H +I  +RD  EED  E  A    LSY+ +DGN
Sbjct: 61  NPLIVNSDGNLLALDAKITFDDNGLFQHPNITAMRDHDEEDPLETRAANAGLSYVKMDGN 120

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           IGCMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V  A KII SD  V+GIL+NI
Sbjct: 121 IGCMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERVKEALKIILSDKEVQGILVNI 180

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           FGGIMRCD++ +GI++A K++ I +PLV+RL G NV+ G  +++ SGL +I A DL DAA
Sbjct: 181 FGGIMRCDIIAEGIIAAAKDIGIKVPLVVRLAGTNVEKGEEILSNSGLEIIPAHDLADAA 240

Query: 389 QKIVHAVK 396
            KIV A++
Sbjct: 241 NKIVAAIR 248


>gi|254559361|ref|YP_003066456.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
           DM4]
 gi|254266639|emb|CAX22412.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
           DM4]
          Length = 388

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 124/387 (32%), Positives = 189/387 (48%), Gaps = 23/387 (5%)

Query: 1   MNIHEYQAK-ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN  E+ AK   L    +PV + ++  +   A++A + +     +VK+Q+  G RGK   
Sbjct: 1   MNFLEHVAKARALAPAGIPVPRAILCRTPEEAQAAFEEIG--PCMVKAQVPTGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG++  +S +   S    ILG  +           V  V +E+ A I RE Y
Sbjct: 57  --------GGIKPANSAEEARSVAERILGMRI-------DDHAVGSVLLEEQARIAREFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D        + ST+GGMDIEEVA   P  + +  +DP  G   +  A        
Sbjct: 102 AAVLLDTAGRCPLVLFSTEGGMDIEEVAATRPDALHRHRVDPEAGF-DKAAAHALLAGLD 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
              A      +   LY      D  L+EINPL I+ +GR   LD K++ DD+A +R  D+
Sbjct: 161 LAGAEDQIAGILAALYATSARVDAELIEINPLAILADGRAVALDCKLTLDDSAAFRQADL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E E   + L +I LDG++G + NGAGL+M TMD+I   GG PANFL++
Sbjct: 221 TGEAAEEPMTDLEREGAANGLKFIQLDGDVGVLANGAGLSMTTMDVISHCGGRPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K  AA K++ S+  VK +++N  G   R DV+ KG+++A K +  +IP+   +
Sbjct: 281 GGEA-YTKSEAALKLVLSNPGVKSLVVNFCGAFARTDVMAKGVVTAWKRLAPDIPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDD 386
            G   D   RL+ + GL       ++D
Sbjct: 340 HGTGEDEAVRLVRD-GLGQEPFDLMED 365


>gi|312797176|ref|YP_004030098.1| succinyl-CoA synthetase beta chain [Burkholderia rhizoxinica HKI
           454]
 gi|312168951|emb|CBW75954.1| Succinyl-CoA synthetase beta chain (EC 6.2.1.5) [Burkholderia
           rhizoxinica HKI 454]
          Length = 234

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 117/233 (50%), Positives = 168/233 (72%)

Query: 165 VTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +   +   +   + +   +          LYKAF + D SL EINPLI+  +G++  LD+
Sbjct: 1   MQDAEADEIAKKIGVPEASLAQARANLHGLYKAFWETDASLAEINPLILTGDGKVIALDA 60

Query: 225 KISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD 284
           K +FD NAL+RH +I   RD+ EED  EIEA + +L+YI+LDGNIGC+VNGAGLAMATMD
Sbjct: 61  KFNFDSNALFRHSEIVAYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMD 120

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
            IKL+GG PANFLDVGGGA  +KV  AFK++  + ++K IL+NIFGGIMRCDV+ +G+++
Sbjct: 121 TIKLFGGEPANFLDVGGGATTEKVTEAFKLMLKNPNLKAILVNIFGGIMRCDVIAEGVIA 180

Query: 345 AVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           A K V + +PLV+R++G N D+G +++A+SGL +I+A  +++AAQK+V A +G
Sbjct: 181 ASKAVHLQVPLVVRMKGTNEDLGKKMLADSGLPIISADSMEEAAQKVVAAAEG 233


>gi|13235360|emb|CAC33726.1| Succinyl-CoA synthetase beta subunit [Rickettsia typhi]
          Length = 248

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 126/248 (50%), Positives = 169/248 (68%)

Query: 149 DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI 208
             P+KI K  +DP  G+    +  +   L  +        ++  ++Y AF + D + +EI
Sbjct: 1   KMPEKIIKFAVDPATGLQDFHMRGIAYGLGFKDSQAKQMKEIVKSVYNAFIETDATQIEI 60

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
           NPLII     L  LD+KI+FDDN L++H +I  +RD  EED  E  A    LSY+ +DGN
Sbjct: 61  NPLIINSYKNLLALDAKITFDDNGLFKHPNITAMRDHDEEDPLETRAANAGLSYVKMDGN 120

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           IGCMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD+++V  A KII SD  VKGIL+NI
Sbjct: 121 IGCMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRERVKEALKIILSDKEVKGILVNI 180

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           FGGIMRCD++ +GI++A +++ I +PLV+RL G NV+ G  +++ S L +I A DL DAA
Sbjct: 181 FGGIMRCDIIAEGIIAAARDIGITVPLVVRLAGTNVEKGKEILSNSNLKIIPAHDLADAA 240

Query: 389 QKIVHAVK 396
            KIV A++
Sbjct: 241 NKIVEAIR 248


>gi|218885135|ref|YP_002434456.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756089|gb|ACL06988.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 709

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 118/388 (30%), Positives = 185/388 (47%), Gaps = 22/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L     + V  G         ++     PGP YV K+Q+  GGRGK    
Sbjct: 1   MFLNEHQSKKLFAAAGIAVPAGD-CLGPEDVDAYAPPFPGPWYV-KAQVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    +  ++ +  R ILG T+        G  V  V VE   DI +E YL
Sbjct: 56  -------GGVLRADTPDALRATARTILGMTI-------KGHAVPFVRVEPATDIRKECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++ R    +    S +GGM++E  A      + ++ +D   G+    + +    L   
Sbjct: 102 SFMLSRQRREMLLTTSHRGGMEVEATADSRKPLVQRVPLD--AGLREHHLRAAFFELGAD 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   DL   L++A  D  + L EINPL+    G+   LD K+  DDN +    D+Q
Sbjct: 160 PAGWAGFRDLAERLFRAVRDDGLLLAEINPLVFTGAGQWVALDGKVELDDNVVDLRPDLQ 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                    + E  A+   LSY+ L G +G +VNGAGLAMATMD++   G   ANF+D+G
Sbjct: 220 GYYTPEHHGAEENAARDAGLSYVGLSGWVGLLVNGAGLAMATMDLLNFSGLPAANFMDLG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  A  ++ ++  V+ + IN+FGGI+ C  + + ++ A+   +   P+V+R+ 
Sbjct: 280 GAADGARMRRALDLLFANPQVRAVFINLFGGIVSCAGVARALMEALGTERAAQPVVVRMA 339

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDA 387
           G     G  L+       VI A ++ DA
Sbjct: 340 GHESAEGRELLRAFAHPDVIIADEVTDA 367


>gi|218532112|ref|YP_002422928.1| succinate--CoA ligase (ADP-forming) [Methylobacterium
           chloromethanicum CM4]
 gi|218524415|gb|ACK85000.1| Succinate--CoA ligase (ADP-forming) [Methylobacterium
           chloromethanicum CM4]
          Length = 384

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 124/386 (32%), Positives = 187/386 (48%), Gaps = 23/386 (5%)

Query: 1   MNIHEYQAK-ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN  E+ AK  +L    +PV + V+  +   A +A   L     +VK+Q+  G RGK   
Sbjct: 1   MNFLEHVAKARVLAPAGIPVPRAVLCRTPEEAAAAFGELG--PCMVKAQVPTGKRGKA-- 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   GG++  ++ +        ILG T+     G        V +E  A I  E Y
Sbjct: 57  --------GGIKPANAAEEARGVAERILGMTIDCHAVGA-------VLLEQQATIASEFY 101

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++L+D  S     + ST+GGMDIEEVA   P  + +  +DP  G      A        
Sbjct: 102 AAVLIDTASRCPLVLFSTEGGMDIEEVAATRPDALRRHAVDPEAGF-DAAAARALLAGLD 160

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A     D+  +L +     D  L+EINPL ++ +GR+  LD K++ DD+A +R  D+
Sbjct: 161 LGGAEGAVADILASLTETSGRVDAELIEINPLAVLDDGRVVALDCKLTLDDSAAFRQGDL 220

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E E     L +I LDG++G + NGAGL M TMD+I   GG PANFL++
Sbjct: 221 AAEAAEEPMTELEREGAAQGLKFIQLDGDVGVLANGAGLTMTTMDVISHCGGRPANFLEI 280

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG A   K  AA K++ S+  VK +++N  G   R DV+ +G+++A K +  +IP+   +
Sbjct: 281 GGEA-YTKSEAALKLVLSNPGVKSLVVNFCGAFARTDVMAEGVVTAWKRLDPDIPVFFSI 339

Query: 360 EGANVDIGNRLIAESGLNVITAIDLD 385
            G   D   RL+ E GL       ++
Sbjct: 340 HGTGEDEAVRLVRE-GLGCEPFDLME 364


>gi|70607032|ref|YP_255902.1| succinyl-CoA synthetase beta chain [Sulfolobus acidocaldarius DSM
           639]
 gi|68567680|gb|AAY80609.1| succinyl-CoA synthetase beta chain [Sulfolobus acidocaldarius DSM
           639]
          Length = 337

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 127/379 (33%), Positives = 202/379 (53%), Gaps = 55/379 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K L +   +P+ KGVV  S       IK       VVK+Q+  G RGK    
Sbjct: 1   MKLYEYEGKELFKAVGIPIPKGVVTDSP------IKWDG--KAVVKAQLLEGARGK---- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 +G V+V  +++  I++++++                +    VE+     RELY+
Sbjct: 49  ------RGLVKVTDNVEQTIAEMKKLG---------------IQKFLVEEFIPHTRELYI 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +      AST+GG+DIE  +      +    I    G+ S DV ++   L ++
Sbjct: 88  SALIDRDTAEPIIAASTEGGIDIESNSN-----VKIFHIPMERGIRSYDVYNIEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LY+   + D  L EINPL +  +G++  LDSK+  +DNAL+RH D+ 
Sbjct: 143 GIE-----PILKGLYRLITEFDAELAEINPLAVTNDGKIIALDSKVILEDNALFRHEDL- 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     +++  K    +Y+ LDG++G + NGAGL MATMD++K+ GG PA+F D+G
Sbjct: 197 ---------IQKLGRKPAESNYVELDGDVGIIGNGAGLTMATMDMVKIMGGNPADFFDIG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA +++V  A   I S+  VK I++NI+ GI RCD +  GI+ A+K   + IP+ +RL 
Sbjct: 248 GGAGRERVKEAIINIASNKKVKKIVMNIYSGITRCDEVAMGIVEALK--IVKIPIYVRLV 305

Query: 361 GANVDIGNRLIAESGLNVI 379
           G N + G R++ E+G+ V 
Sbjct: 306 GTNEEEGRRILRENGIPVY 324


>gi|219852541|ref|YP_002466973.1| succinyl-CoA synthetase, beta subunit [Methanosphaerula palustris
           E1-9c]
 gi|219546800|gb|ACL17250.1| succinyl-CoA synthetase, beta subunit [Methanosphaerula palustris
           E1-9c]
          Length = 360

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 129/384 (33%), Positives = 201/384 (52%), Gaps = 36/384 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK +     + V +GVVI+S     S    +P    V+K+Q+  GGRGK    
Sbjct: 1   MKLREYEAKRIFGAAGIQVPRGVVITSPEEITSVA--MPADKVVLKAQVDVGGRGKAGGI 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L   ++                 ++ G T+        G  V+ V VE+   I  E +L
Sbjct: 59  LLCPAAEATATAT-----------DLFGRTI-------KGLPVDQVLVEEQLPITHEYFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLEL 179
           S+ +DR++     + +  GG+DIE  A      I ++ +  L   + +  +  L      
Sbjct: 101 SIAIDRSTKQPILLFADAGGVDIEATAAASSDAIRRVNVPRLMTDLPAFVIRDLL----- 155

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G A  + G +   L+  F +KD  L EINPL+    G +   D+K+  DDNAL+R   I
Sbjct: 156 -GDAPKELGTVINTLWHVFNNKDALLAEINPLVTTTRG-VYAADAKLIIDDNALWRQ-GI 212

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            + RD++    RE EA+QH  SY+ LDG+IG + NGAGL MAT+D+I+ Y G  ANFLDV
Sbjct: 213 TQNRDLT---PREREAEQHGFSYVELDGSIGVVGNGAGLTMATLDLIEYYEGKAANFLDV 269

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGADQ++V  A +++     V+ I++N+ GGI RCD + +GI+SA     ++  +++R+
Sbjct: 270 GGGADQERVRFAVQLLAGAPQVQVIIVNLLGGITRCDEVARGIISA----GVSQRVIVRM 325

Query: 360 EGANVDIGNRLIAESGLNVITAID 383
            G N   G  L+A  G  +  ++D
Sbjct: 326 AGTNEAEGKALLAAHGYQMYESMD 349


>gi|320532402|ref|ZP_08033240.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135379|gb|EFW27489.1| succinate-CoA ligase, beta subunit [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 330

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 110/324 (33%), Positives = 186/324 (57%), Gaps = 14/324 (4%)

Query: 79  VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQ 138
             +  R+ILG  +        G  V  V + DG D+  E Y S+L+DR       + S +
Sbjct: 1   AEARARDILGMDI-------KGHTVRAVLISDGVDLDAEYYFSILLDRAERQYLAMCSRE 53

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ-GQARIDGGDLFPNLYKA 197
           GGMDIE +A + P+ + ++ IDPL G+T      + +    + G    +   +   L++ 
Sbjct: 54  GGMDIETLAAERPEALARVGIDPLEGITPAVAHRIVEAAGFEAGPLADEVAAVIERLWEV 113

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQ 257
           F  +D +L+E+NPL+   +GR+  LD K++ DDN+ +RH    EL D +  D  E  A++
Sbjct: 114 FTAEDATLVEVNPLVKAADGRIIALDGKVTLDDNSRFRHPAHAELVDNAATDPLEARARE 173

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIK-----LYGGAPANFLDVGGGADQDKVAAAF 312
             L+Y+ L+G +G + NGAGL M+T+D++        G  PANFLD+GGG+  + +A   
Sbjct: 174 AGLNYVRLEGEVGVLGNGAGLVMSTLDVVAGAGERHGGMKPANFLDLGGGSSAEVMATGL 233

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLI 371
           +++ SD  V+ IL+N+FGGI  CD + +GI++AV+ +  +  P+V+RL+G N + G  ++
Sbjct: 234 EVVASDPQVRAILVNVFGGITSCDTVAQGIVAAVESLGGLPKPVVVRLDGNNAETGRAIL 293

Query: 372 AESGLNVITAIDLDDAAQKIVHAV 395
           A++ +  +T +D  D A  +V A+
Sbjct: 294 ADAAIEGVTVVDTMDGAADVVTAI 317


>gi|298528735|ref|ZP_07016139.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512387|gb|EFI36289.1| succinyl-CoA synthetase, alpha subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 692

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 130/399 (32%), Positives = 197/399 (49%), Gaps = 27/399 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +K LL+   + V +G +I               P +VVK+ +  GGRGK    
Sbjct: 1   MKLNEHMSKELLKGAGILVPRGEMI-GPGDIRDFAPEFEFP-WVVKAMVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  + +   +  R+ILG  +        G  V  V VE  + I RE+YL
Sbjct: 56  -------GGVRVVQNREEFETAARQILGMQI-------KGESVPFVRVEPASHIQREMYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +DR    +   A   GG+DIE   +D    I  L +DP +G+    +  +   L+L 
Sbjct: 102 SMTLDRQQKSLVLTAGRTGGVDIESSGRDN---ILSLTLDPGLGLHDFQIRRVFFHLDLD 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    L  NLY AF    + L EINPL++     L  LD K+  DDN +  +  + 
Sbjct: 159 KSMFRSFSGLLKNLYTAFTRNRLLLAEINPLVLTGGQELTALDGKVELDDNYVQINRGLL 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                     +E  A +  LSY  LDG +G +VNGAGLAMATMD++   G   ANFLD+G
Sbjct: 219 GYHVPEHLGEQERLAGEAGLSYHRLDGRVGMVVNGAGLAMATMDLLNFSGVPAANFLDLG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQ++++ A  I+ +D  V+ + INIFGGI+ C+ +   + +A++E  +  P+V+R  
Sbjct: 279 GGADQERISRALDILFNDPGVELVFINIFGGILSCEKVALALAAALEEASVARPMVVRFS 338

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDAAQKIVHAVKGV 398
           G       R+I      N+    DL     + + A+K +
Sbjct: 339 GFKAREAGRIIQGLNADNIYYVQDLA----RALEALKEL 373


>gi|332797165|ref|YP_004458665.1| succinyl-CoA synthetase subunit beta [Acidianus hospitalis W1]
 gi|332694900|gb|AEE94367.1| succinyl-CoA synthetase beta subunit [Acidianus hospitalis W1]
          Length = 335

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 133/391 (34%), Positives = 198/391 (50%), Gaps = 58/391 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K L  K  + +  G+V       +           VVK+QI  GGRGK    
Sbjct: 1   MKLYEYEGKLLFSKVGIKIPHGIVTEGNIDWKGKA--------VVKAQILEGGRGKRGLV 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++                V S I+E+                +N   VE+     RE+YL
Sbjct: 53  KVT-------------DDVNSTIQEM------------RKLGINKFLVEEYIPHDREVYL 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++DR +     IAS  GG+DIE   +     + K +I    G    D+  +   L ++
Sbjct: 88  SMILDRDTAEPMLIASPHGGIDIESSGE-----VKKFIIPIERGPRGYDIIEIEKYLGVK 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   LYK F + D  L+EINPL +  NG +  LDSK+  +DNALY+H D  
Sbjct: 143 G-----LFQVIQGLYKIFTEYDAELVEINPLAVTDNG-VIALDSKVILEDNALYKHQDF- 195

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L++++ E S +        SY+ LDG+IG + NGAGL MATMD++KL GG PA+F+DVG
Sbjct: 196 -LKEINREYSPD--------SYVELDGDIGIIGNGAGLTMATMDMVKLMGGNPADFMDVG 246

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD+++V      + S+  VK IL+NI+GGI RCD +  GI+ A     I  P+ +RL 
Sbjct: 247 GGADRERVRYCVIKVGSNPKVKKILVNIYGGITRCDEVALGIVDAY--NVIKKPIFVRLV 304

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           G N + G +++ E G+N     +  DA +  
Sbjct: 305 GTNEEEGWKILKEHGINFY--ENPIDAVRDA 333


>gi|323697830|ref|ZP_08109742.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio sp. ND132]
 gi|323457762|gb|EGB13627.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio desulfuricans
           ND132]
          Length = 692

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 119/388 (30%), Positives = 187/388 (48%), Gaps = 23/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+ +K L  K  +PV +G  +      +      P P + +K+Q+ +GGRGK    
Sbjct: 1   MLLDEHHSKLLFDKARIPVPQGAAVFPGEE-DDFAPDYPLP-WFLKAQVLSGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+          +  R++ G  +        G  V  + VE G  I RE YL
Sbjct: 56  -------GGILRIDDPADFPARARKLFGRDI-------RGEAVPYIRVEPGEAIARECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL V R    +   A  +GG++IE++ +D    +    I    G+    V +    L L 
Sbjct: 102 SLTVSRERRCILLTAGRKGGVEIEKLGQDN---LLVQPITLPGGMAPHQVRAAFFHLGLP 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D  +L   L++   D  + L EINPLI+  + RL  LD K+  DDN +  H +  
Sbjct: 159 RELFKDFSELLDTLFRCMLDNGLLLAEINPLIVTPDDRLVALDGKVEMDDNFVDLHPEAG 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                      E  A+   LS++ L G +G MVNGAGLAMATMD++   G   +NFLD+G
Sbjct: 219 AYYRPEHATPEENMARDAGLSFVRLPGWVGLMVNGAGLAMATMDLLNFSGLPASNFLDLG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGADQ ++  A +++  D  V+ I IN+FGGI+ C+ + + +  A+       P+V+R+ 
Sbjct: 279 GGADQKRMETALELLFGDHRVQAIFINLFGGILSCEKVAQAMKGALGGQSPKKPIVVRMS 338

Query: 361 GANVDIGNRLIAESGL-NVITAIDLDDA 387
           G +   G  ++ E  + N+  A D+  A
Sbjct: 339 GKDALQGLEILRELNVNNLHMAGDMQAA 366


>gi|78357377|ref|YP_388826.1| succinyl-CoA synthetase (ADP-forming) subunit alpha / succinyl-CoA
           synthetase (ADP-forming) subunit beta [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78219782|gb|ABB39131.1| succinyl-CoA synthetase (ADP-forming) alpha subunit / succinyl-CoA
           synthetase (ADP-forming) beta subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 700

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/388 (26%), Positives = 187/388 (48%), Gaps = 22/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +K L  +  +    G +++    AE          + +K+Q+  GGRGK    
Sbjct: 1   MFLNEHMSKVLFAEAGIDTPAGDLLTPGQLAEYTPAV--SAPWFLKAQVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R  ++LK +    +++    +        G RV  + +E   DI RE YL
Sbjct: 56  -------GGIRRAATLKELRETAQDMFTMEI-------KGHRVPFLRIESATDIRRECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++ R    +    S  GG+ +E         + ++ +D   G+    + +    + ++
Sbjct: 102 SFVLSRERRDLLLTTSRAGGIHVESSTGQQKPLVQRVPLD--SGLREHHLRAAFFEMGVE 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       +   LY+A  +  + L EINPL++  +GR   LD K+  DD+ +    D++
Sbjct: 160 KEHWAGFKAMAEKLYRAVREYGLLLAEINPLVLTCDGRWVALDGKVELDDSVVDLQPDLE 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                      E  A++  LSY+ L G +G +VNGAGLAMATMD++   G + ANF+D+G
Sbjct: 220 RFYTPEHHSREENLAREAGLSYVELKGWVGILVNGAGLAMATMDLLNFSGLSAANFMDLG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  A  ++  + +V+ + IN+FGGI+ C  + + ++ A++      P+V+R+ 
Sbjct: 280 GAADASRMRRALDLLFENRNVRAVFINLFGGIVSCADVARALVDALEGGDAPKPIVVRMA 339

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDA 387
           G     G  L+ +     V  A ++ +A
Sbjct: 340 GHESAEGRALLHDFAHPSVTIAQEMHEA 367


>gi|115402819|ref|XP_001217486.1| hypothetical protein ATEG_08900 [Aspergillus terreus NIH2624]
 gi|114189332|gb|EAU31032.1| hypothetical protein ATEG_08900 [Aspergillus terreus NIH2624]
          Length = 294

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/286 (38%), Positives = 165/286 (57%), Gaps = 5/286 (1%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  L+T QT P+G  V  +Y+    DI +E YL++  DR       + S +GG+++E 
Sbjct: 1   MLGHRLVTNQTPPSGLPVEQLYIYRAVDIAKEYYLAVTFDREKATPVLLMSDEGGVNVES 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
                  ++ +       G+T E +A +                +   L + F +KD  L
Sbjct: 61  ----NVNQLQRFRFHFSTGITHEIIAYIEAQFGFSDAEIGAISHILHQLVRLFREKDAIL 116

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LE+NPL     G    LD+K++FDD+A +R  D+  L +   E+  E EA Q  LSY+ L
Sbjct: 117 LELNPLARTTEGSFICLDAKMNFDDSARFRQHDLFCLEEHPPEEKDEYEASQLGLSYVRL 176

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIG +VNGAGLAMAT D++ LYGG  ANFLD+GGGA ++ ++ AF I+  D+ +K +L
Sbjct: 177 DGNIGVIVNGAGLAMATNDLVTLYGGKCANFLDIGGGATRETLSKAFSILQGDARIKALL 236

Query: 326 INIFGGIMRCDVLVKGILSAV-KEVKINIPLVMRLEGANVDIGNRL 370
           +NI+GGI+RCD++ + IL+A         P+V+RL+G N + G+ L
Sbjct: 237 VNIYGGIVRCDMVAESILAAYAATGGFRFPVVVRLQGTNCEEGSHL 282


>gi|324519937|gb|ADY47520.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 359

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 105/275 (38%), Positives = 154/275 (56%), Gaps = 3/275 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL  Y   + + +V SS   AE  ++      Y+VKSQ+ AGGRGKGRF 
Sbjct: 27  LNLQEYQSKKLLEDYGCCIQRFIVASSRDEAEQQMQDFNRRRYMVKSQVLAGGRGKGRFI 86

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  GGV V    +  +S + E++G  L+TKQTG  G  V  V + +   I RE YL
Sbjct: 87  GGRSDL-GGVAVAEGKQKALSLVEEMVGKILVTKQTGKKGLPVKKVLICEAVSIKRETYL 145

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+DR +     + S  GGM IE VA   P+ +FK  ++   G+T E    +   L   
Sbjct: 146 AILMDRETNGPMVVYSPAGGMYIETVAATNPELVFKEPVNIDKGLTKEQADKIAKNLGFN 205

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G +          LYK F   D + +EINPL   +  +   +D+K++FDDNA +R  +I 
Sbjct: 206 GVSAERAAHEISCLYKLFIAVDATQVEINPLAETEGMQAYCIDAKLNFDDNAYFRQKEIF 265

Query: 241 ELRDV--SEEDSREIEAKQHNLSYIALDGNIGCMV 273
            + +   SE ++REI A +HNL+YIAL+G+IGCM 
Sbjct: 266 AMEEASGSEANAREILASEHNLNYIALEGDIGCMG 300


>gi|83589265|ref|YP_429274.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Moorella
           thermoacetica ATCC 39073]
 gi|83572179|gb|ABC18731.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Moorella
           thermoacetica ATCC 39073]
          Length = 417

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 178/407 (43%), Gaps = 51/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + EYQ K  LRK  +PV  G   S+   A      L  P+ V K+Q+ AGGRGK     
Sbjct: 3   KLLEYQGKEWLRKAGIPVPAGRAASTPEEARQIAAELGKPVAV-KAQVQAGGRGKS---- 57

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 G V++ ++ +   +    ILG+ +        G  V  V VE+  DI  E Y++
Sbjct: 58  ------GAVKLVNTPEEARAAAASILGTQI-------KGYPVRQVLVEEKLDIAHEYYVT 104

Query: 122 LLVD--RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           ++V+  R +     + ST+GGMDIE V +   +KIFKL I PL G+   D   L     +
Sbjct: 105 IIVNSARDARCPMLMFSTEGGMDIESVPE---EKIFKLHISPLFGLEVYDAVDLLVKAGI 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD- 238
                ++  +     + A+   D   LE NPL++  +G L   D K+  D++++YRH + 
Sbjct: 162 PNDQLMNFANFLVKFWGAYKKYDCFTLETNPLVMTASGDLVAADCKMDVDNSSVYRHPEM 221

Query: 239 -IQELRDVSEEDSREIEAKQHNLSYIALDGN---------------IGCMVNGAGLAMAT 282
            I+  RD+  E   E++     +    L G+               IG    G G AM  
Sbjct: 222 GIEIARDLGHE-PTELDVIGWGIEKTDLRGSGFVMSMGFDEKSPGYIGYHPIGGGSAMMG 280

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---- 338
           MD +      PAN+ D  G     K+    K+I S  ++ G L+   GG M  +      
Sbjct: 281 MDALNNVNLKPANYADTSGNPVASKIYRVAKVILSQPNIDGYLL---GGFMMANQEQWHH 337

Query: 339 VKGILSAVKEV---KINIPLVMRLEGANVDIGNRLIAESGLNVITAI 382
              ++  ++E+   K  +P V+ L G   +    ++ E   +V  A 
Sbjct: 338 AHAVVKVLREILPKKPGLPCVLLLCGNKEEESLAILREGLKDVEGAT 384


>gi|119719430|ref|YP_919925.1| Fis family transcriptional regulator [Thermofilum pendens Hrk 5]
 gi|119524550|gb|ABL77922.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Thermofilum
           pendens Hrk 5]
          Length = 372

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 120/392 (30%), Positives = 196/392 (50%), Gaps = 35/392 (8%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAES----AIKTLPGPLYVVKSQIHAGGRGKGRF 59
           +E++ K +  K+ VPV K  +++  H A       IK L  P  +VK+Q+   GRGK   
Sbjct: 4   YEFEVKDIFEKFQVPVEKSCLLT--HEALKDSLGCIKGLRTP-LIVKAQVRGWGRGKAGL 60

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                     V+   + +  +   +E              G ++  V V +   ILRE+Y
Sbjct: 61  ----------VKSAENPEEALKVAQEFFLREF-------NGEKIRYVLVSERKRILREMY 103

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS +V         +AS  GG+D+EE++K  P  + K+ IDP  G+    V ++   L +
Sbjct: 104 LSFMVSSNPPGFLLLASKHGGVDVEELSK-TPGGLLKIFIDPFEGLRDYMVRTVAGYLGV 162

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL-- 237
             +       +  +L++ F + + +LLE+NPL + ++G +  LD K   DD+A  +    
Sbjct: 163 PQEHIE---KILRSLWQIFREYNFTLLEVNPLALTEDG-VLALDRKGVIDDDASRKSSLT 218

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            I   R  SE D   + A Q   S + LDG+   + NGAGL MAT+D +   G  P  FL
Sbjct: 219 GIFA-RYFSELDELSLSAFQKGFSVVKLDGDTAVVGNGAGLTMATLDAVLEAGARPGLFL 277

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI-NIPLV 356
           D+GGGAD ++V  A  ++    ++  IL+NI GGI RCD + +G++ A+   K  ++ + 
Sbjct: 278 DLGGGADAERVREALLLVLKQQNISKILLNILGGITRCDEVARGVVQALSSAKPSSVKVA 337

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           +RL G   D G R++ E+GL+      L++A 
Sbjct: 338 VRLSGFMEDEGRRILREAGLS--AFDSLEEAV 367


>gi|88601414|ref|YP_501592.1| succinyl-CoA synthetase subunit beta [Methanospirillum hungatei
           JF-1]
 gi|88186876|gb|ABD39873.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Methanospirillum hungatei JF-1]
          Length = 359

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 51/383 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVIS-------SVHAAESAIKTLPGPLYVVKSQIHAGG 53
           M + EY+AK +L+K  +P+ +GV++        S    E+A          +K+Q+   G
Sbjct: 1   MKLKEYEAKDILQKAGIPIPRGVLVKKGSDYLVSPDIKEAA----------IKAQVEVAG 50

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK                      +++D   I  +T    QT   G  V  + +E+   
Sbjct: 51  RGKAGGI------------------LMADHAGIRDTTEKLFQTTIKGLPVEEILIEEKLQ 92

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-VTSEDVAS 172
           I  E YLS+ +DR+      + +T+GG+DIEEVA+  P  I K  + PL+  V    +  
Sbjct: 93  IQHEYYLSITIDRSQKAPVILFTTEGGVDIEEVAQKNPAAIRKATVYPLLSKVPGYTLRY 152

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L +       A  + G +   LY  F  +D  L EINPL++  +G L   D+K+  DDNA
Sbjct: 153 LLNG------APKEIGAIIQKLYTVFMSQDALLAEINPLVMTPDG-LFAADAKLILDDNA 205

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           L RH  IQE RD+SE   RE +A  H  S++ L+GNIG + NGAGL MAT+D+I   GG 
Sbjct: 206 LARH-GIQENRDLSE---RERKAAAHGFSFVELNGNIGVIGNGAGLTMATVDLINRMGGR 261

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           PANFLDVGGGAD+ +VA A +++ S   V  I++N+ GGI RCD +  GI+ A     ++
Sbjct: 262 PANFLDVGGGADRVRVAHAVRLLGSMPDVTVIIVNLLGGITRCDEVAAGIIEA----GVS 317

Query: 353 IPLVMRLEGANVDIGNRLIAESG 375
             +++RL G N   G  L++  G
Sbjct: 318 QQIIVRLAGTNEAEGKALLSSKG 340


>gi|317485054|ref|ZP_07943936.1| ATP-grasp domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316923589|gb|EFV44793.1| ATP-grasp domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 425

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/396 (28%), Positives = 168/396 (42%), Gaps = 49/396 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
              EYQ K  L K  +PV KG V SS   AE A + + GP+ V K Q+ AGGRGK     
Sbjct: 3   KFLEYQGKEWLAKGGMPVPKGRVASSPEEAEEAARWIGGPVAV-KGQVQAGGRGKA---- 57

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 G V++  + +   +   EIL  T+        G  V  V +E+  DI +E Y S
Sbjct: 58  ------GIVKLADTPEEARALAEEILAKTV-------KGLPVEKVLIEEKLDIKKEYYCS 104

Query: 122 LLVD--RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            +++  R +     + ST+GGMDIE V +     +F+L IDP  G+ S D   +C    +
Sbjct: 105 FVINNAREARCPMLMFSTEGGMDIESVDES---LLFRLNIDPQYGLQSYDAIDVCTQAGI 161

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD- 238
                         L K +   D   LEINP ++  +G L   D K+  D++A++RH D 
Sbjct: 162 APADLSKFASFLTKLSKLYKKYDCQTLEINPFVMTGDGSLYCADCKMEIDNSAVFRHPDF 221

Query: 239 -IQELRDVS-------------EEDSREIEAKQHNLSYIAL-DGNIGCMVNGAGLAMATM 283
            I+  RD+              EE          N+ Y  +  G +G    G G AM  +
Sbjct: 222 GIKIARDLPGQPTDLDVIGWGIEETDARGTGFLMNMGYDEVSPGYVGYHPIGGGSAMMGL 281

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL----V 339
           D +   G   AN+ D  G     K+    K   S  +++G L+   GG M  +       
Sbjct: 282 DALNAVGLKAANYADTSGNPVAAKIYRVAKATLSQPNIEGYLL---GGFMMANQEQWHHA 338

Query: 340 KGILSAVKEVKINI---PLVMRLEGANVDIGNRLIA 372
             ++  ++E+       P V+ L G   D    ++ 
Sbjct: 339 HALVKVLREMLPKKPGFPCVLLLCGNREDESLEILR 374


>gi|146304345|ref|YP_001191661.1| succinyl-CoA synthetase subunit beta [Metallosphaera sedula DSM
           5348]
 gi|145702595|gb|ABP95737.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Metallosphaera
           sedula DSM 5348]
          Length = 337

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 142/397 (35%), Positives = 207/397 (52%), Gaps = 60/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K L    N+PV +G V+ S    +           VVKSQ+  GGRGK    
Sbjct: 1   MKLYEYEGKRLFSLVNIPVPRGQVVKSPVHVQ--------GKVVVKSQLLEGGRGKRGLV 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +  DS G ++                       +    G  +N   +E+     RE+YL
Sbjct: 53  RVTEDSYGTIQ-----------------------ELMKEG--INTFLIEEFVPHTREIYL 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR +G    +AS  GG++IEE      + +   +I     +   DV ++   +  +
Sbjct: 88  SAMMDRETGNPMIVASPFGGINIEES-----KDVKTFVIPIDRKLMRYDVDAIEKYVGYR 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G      G +   L +   + D  L EINPL I +NG L  LDSK+  DDNALYRH ++ 
Sbjct: 143 G-----LGGVIEGLLRLILEYDAELAEINPLAITENGPL-ALDSKVILDDNALYRHEEL- 195

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L+++  E       K    SY+ L+G++G + NGAGL MATMD++KL GG PA+FLDVG
Sbjct: 196 -LKELQRE-------KVPADSYVELEGDVGIVGNGAGLTMATMDLVKLMGGNPADFLDVG 247

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD +KVA+A   + S+  VK I+INIFGGI RCD + KGI+ A +  KIN P+ +RL 
Sbjct: 248 GGADTEKVASAVIRVGSNPKVKKIVINIFGGITRCDEVAKGIVEAYR--KINKPIYVRLT 305

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N D G +++   G+ V      +DA   I  A++ 
Sbjct: 306 GTNEDEGKKILQSQGIRVY-----EDALTAIGDALRS 337


>gi|242279515|ref|YP_002991644.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242122409|gb|ACS80105.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 698

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 116/395 (29%), Positives = 197/395 (49%), Gaps = 36/395 (9%)

Query: 1   MNIHEYQAKALLRKY-NVPVAKGVVISSVHAAESAIKTLPGP------LYVVKSQIHAGG 53
           M ++E+ +K LL++   +PV  GV I+         K LPG        +++K+Q+  GG
Sbjct: 1   MLLNEHLSKVLLKEAAGLPVPTGVKITE--------KDLPGLEPYFPLPWILKAQVPVGG 52

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK           GG++   S        R+ILG  +        G++V  +  E   D
Sbjct: 53  RGKA----------GGIQKVDSRDEYEKTARQILGMEI-------KGNKVPFLRAEPAVD 95

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           I +E YLSL + R    V      +GG++IE +    P+ +    I    G+    + + 
Sbjct: 96  IRKEFYLSLTLSRQRRKVIMTVGREGGVEIENMG---PENLLIQEISLPGGLQPNQIRAA 152

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
              + +  +  +D  ++  NLY    D  + L EINPL +   G+L  LD KI  DDN +
Sbjct: 153 FFHIGIAKELFVDFSNIVKNLYNTMIDYGLLLAEINPLALTGYGKLLALDGKIEMDDNIV 212

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
             +   ++          E  A+   +S+++L G +G + NGAGLAMA+MD +       
Sbjct: 213 DLNPAFEKFYQPEHSTPVENIARDAGMSFVSLKGWVGLIANGAGLAMASMDALNFSDLPA 272

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
           ANFLD+GG ADQ ++  A +++  D  VK ILIN+FGGI+ C+++ K +++A+   +   
Sbjct: 273 ANFLDLGGAADQKRIETALRLLFDDDQVKAILINLFGGILSCELVAKALVAALGGKEPEK 332

Query: 354 PLVMRLEGANVDIGNRLIAE-SGLNVITAIDLDDA 387
           P+V+R+ G + + G  ++ +  G  +  A ++ +A
Sbjct: 333 PIVVRMSGNSAEEGLEVLKQVKGDKLHRARNMQEA 367


>gi|120602142|ref|YP_966542.1| succinyl-CoA synthetase, subunit alpha [Desulfovibrio vulgaris DP4]
 gi|120562371|gb|ABM28115.1| succinyl-CoA synthetase (ADP-forming) beta subunit / succinyl-CoA
           synthetase (ADP-forming) alpha subunit [Desulfovibrio
           vulgaris DP4]
          Length = 691

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 27/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L  +  +   +G++  S    E  +     P +V K+Q+ AGGRGK    
Sbjct: 1   MFLNEHQSKRLFEEAGIETPQGIMTDSA-GIEGCLPPFDAPWFV-KAQVLAGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR    L  +    ++ILG  +        G  V  V +E    I RE Y+
Sbjct: 56  -------GGVRRADDLAGLRDVAKDILGMRIG-------GHAVPFVRIEPATAIARECYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LEL 179
           S +V R    + F AS  GG+++E       + +      PL G   E V         +
Sbjct: 102 SFMVSRKRRELLFTASGSGGVEVESGQGALVRAV------PLTGEMPEHVIRSAFFCTGV 155

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      +    L+ A  D  + L E+NPL++  +GR   LD K+  DDN +    D+
Sbjct: 156 GREHWAGFREFVLRLHGAVRDYGLLLAEVNPLVLTGDGRWLALDGKVEVDDNVVDIRPDL 215

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E  A++  LSY+ L G +G +VNGAGLAMATMD++   G A ANF+D+
Sbjct: 216 LRFHTPEHLAPEENAAREAGLSYVELKGWVGLLVNGAGLAMATMDLLNFSGLAAANFMDL 275

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  ++  A +++  +  V+ + +N+FGGI+ C  +   ++ A+ + +   P+V+R+
Sbjct: 276 GGAADVPRMRRALELLFGNPQVRVVCVNLFGGIVSCAAVAGALVEALGDGRAAKPVVVRM 335

Query: 360 EGANVDIGNRLIAESGLN-VITAIDLDDA 387
           +G     G +L+       V  A D+D A
Sbjct: 336 DGFEAAEGRQLLERRAHPDVHVARDIDHA 364


>gi|167957426|ref|ZP_02544500.1| succinyl-CoA synthetase subunit beta [candidate division TM7
           single-cell isolate TM7c]
          Length = 351

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 125/385 (32%), Positives = 190/385 (49%), Gaps = 41/385 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK LL    +P+ +G V  +V+  ++    +     V+KSQ+  GGRGK    
Sbjct: 1   MRLLEYEAKNLLSACGMPIPRGKV-FAVNELQAIAAPI-----VLKSQVPIGGRGKL--- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++      + S  R++    +        G   + +  E+  DI RE Y 
Sbjct: 52  -------GGVQIVRHQSDLESVARKMFNLKI-------KGFLPSKLLAEEILDISREFYF 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL ++R +  +  +A T GG++IE               D +          L D L++ 
Sbjct: 98  SLNINRQTAGIELLAHTSGGVEIES-----QDTADFFRRDIVNEKFEALADELADYLDIA 152

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +  +   D+  N Y+ F D D  LLEINPLI+ K+ +L   D+KI+ DD A +RHLD  
Sbjct: 153 DKTFL-LQDIIENAYRCFIDNDCLLLEINPLILTKDSKLIAGDAKITVDDAAAFRHLD-W 210

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S E         HN   +  DG +  + NGAGLAM T+D +   G  PANFLD+G
Sbjct: 211 RFEDNSTE---------HNFIILNRDGAVATIANGAGLAMTTVDAVTASGLKPANFLDIG 261

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  DKV   F+ IT+  ++K I+INIFGGI+RCD + + I+ A +++     L +RL 
Sbjct: 262 GTATSDKVLDCFRQITTLDNIKVIIINIFGGIVRCDDIARAIIDAQRQIPNLPKLAIRLS 321

Query: 361 GANVDIGNRLIAESGLNVITAIDLD 385
           G       +L+A+  L +     L+
Sbjct: 322 GNRESEARQLLAQYNLPLF--DSLE 344


>gi|62319649|dbj|BAD95156.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
 gi|222423482|dbj|BAH19711.1| AT2G20420 [Arabidopsis thaliana]
          Length = 210

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 117/207 (56%), Positives = 155/207 (74%)

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
           +    LY+ F   D ++LEINPL      +L   D+K++FDDNA +R  ++  +RD ++E
Sbjct: 2   EQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQE 61

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
           D RE+ A + +L+YI LDG IGCMVNGAGLAMATMDIIKL+GG PANFLDVGG A + +V
Sbjct: 62  DPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQV 121

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
             AFKI+TSD  VK IL+NIFGGIM+CDV+  GI++A KEV + +P+V+RLEG NV+ G 
Sbjct: 122 VEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGK 181

Query: 369 RLIAESGLNVITAIDLDDAAQKIVHAV 395
           R++ ESG+ +ITA DLDDAA+K V A+
Sbjct: 182 RILKESGMKLITADDLDDAAEKAVKAL 208


>gi|238581854|ref|XP_002389745.1| hypothetical protein MPER_11085 [Moniliophthora perniciosa FA553]
 gi|215452342|gb|EEB90675.1| hypothetical protein MPER_11085 [Moniliophthora perniciosa FA553]
          Length = 227

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/225 (48%), Positives = 157/225 (69%), Gaps = 1/225 (0%)

Query: 172 SLCDMLELQGQA-RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +   L  +  + + +  D+F NLY+ F +KD + +EINP+   K+G++  +D+K  FDD
Sbjct: 2   EVAKKLGFKDASTQDEAADIFINLYRIFKEKDATQIEINPMAETKDGKVLCMDAKFGFDD 61

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA +R  DI  LRD+S+E+  E+EA++ NL++I LDG+IGC+VNGAGLAMATMD++ L+G
Sbjct: 62  NAEFRQEDIFALRDISQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLSLHG 121

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLDVGGGA  + V  AF+I+ +D+ VK I INIFGGIMRCD + +G++ A KE+ 
Sbjct: 122 GNPANFLDVGGGATPETVKKAFEILLADTKVKSIFINIFGGIMRCDYIAEGVIKATKELN 181

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           + IPLV+RL+G        +I ESGL  + +  LD+AA++ V   
Sbjct: 182 MTIPLVVRLKGTKEQEAKDMIKESGLKTMHSDGLDEAAERAVQLA 226


>gi|46580542|ref|YP_011350.1| succinyl-CoA synthase, beta/subunit alphas [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46449961|gb|AAS96610.1| succinyl-CoA synthase, beta/alpha subunits [Desulfovibrio vulgaris
           str. Hildenborough]
          Length = 709

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 27/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L  +  +   +G++  S    E  +     P +V K+Q+ AGGRGK    
Sbjct: 19  MFLNEHQSKRLFEEAGIETPQGIMTDSA-GIEGCLPPFDAPWFV-KAQVLAGGRGKA--- 73

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR    L  +    ++ILG  +        G  V  V +E    I RE Y+
Sbjct: 74  -------GGVRRADDLAGLRDVAKDILGMRIG-------GHAVPFVRIEPATAIARECYV 119

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LEL 179
           S +V R    + F AS  GG+++E         +      PL G   E V       + +
Sbjct: 120 SFMVSRKRRELLFTASGSGGVEVESGQGALVCAV------PLTGEMPEHVIRSAFFCIGV 173

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      +    L+ A  D  + L E+NPL++  +GR   LD K+  DDN +    D+
Sbjct: 174 GREHWAGFREFVLRLHGAVRDYGLLLAEVNPLVLTGDGRWLALDGKVEVDDNVVDIRPDL 233

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E  A++  LSY+ L G +G +VNGAGLAMATMD++   G A ANF+D+
Sbjct: 234 LRFHTPEHLAPEENAAREAGLSYVELKGWVGLLVNGAGLAMATMDLLNFSGLAAANFMDL 293

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  ++  A +++  +  V+ + +N+FGGI+ C  +   ++ A+ + +   P+V+R+
Sbjct: 294 GGAADVPRMRRALELLFGNPQVRVVCVNLFGGIVSCAAVAGALVEALGDGRAAKPVVVRM 353

Query: 360 EGANVDIGNRLIAESGLN-VITAIDLDDA 387
           +G     G +L+       V  A D+D A
Sbjct: 354 DGFEAAEGRQLLERRAHPDVHVARDIDHA 382


>gi|225569266|ref|ZP_03778291.1| hypothetical protein CLOHYLEM_05348 [Clostridium hylemonae DSM
           15053]
 gi|225162065|gb|EEG74684.1| hypothetical protein CLOHYLEM_05348 [Clostridium hylemonae DSM
           15053]
          Length = 383

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 125/396 (31%), Positives = 197/396 (49%), Gaps = 27/396 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+  E + KA L ++ +PV + ++++     +     +  P  V+K QI AG RGK    
Sbjct: 1   MDYLEIEGKAQLERFGIPVNESILLTD----DQVPDGIEYPC-VLKGQILAGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VRV  S + +    + I G ++        G  +  V   +   I  E YL
Sbjct: 53  -------GAVRVVKSKEELTEVKKIIEGISI-------NGHTMEGVIACNFLPISEEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D  +  V  + +  GGMDIEE+A   P+K+ +   D   G  +E       + +L 
Sbjct: 99  GMTLDVKNRAVIMLFTPFGGMDIEELAAAAPEKLLR--FDCTEGFDAEAFRMAAAVFDLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L +A    D + +EINPL ++++GRL  +D+K+  DDN+LYR  D  
Sbjct: 157 AARMEQVADIARKLARACFALDATTIEINPLAVLEDGRLIAIDAKLVIDDNSLYRQGDYI 216

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            L R   E+  +E EA+ H+L+Y+ LD  G+IG M  GAG+ MATMD I+ YGG   NFL
Sbjct: 217 ILPRTEQEKTPQEAEAEAHDLTYVELDAKGDIGTMAGGAGIGMATMDTIRHYGGRVNNFL 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG   +K   A  I+  + S   + +N+FGGI  C  + +GI  A  E+ I  P+V+
Sbjct: 277 DLGGGVTAEKTYQAMCILLKNKSTDYVFVNVFGGINNCADMAEGIARAYTELGIRKPVVV 336

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           +  G N + G  +  + G         D+A Q ++ 
Sbjct: 337 KSRGFNQEQGWSIYEKLGFPQTKYGTTDEAVQTLLK 372


>gi|311234280|gb|ADP87134.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio vulgaris
           RCH1]
          Length = 691

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 27/389 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+Q+K L  +  +   +G++  S    E  +     P +V K+Q+ AGGRGK    
Sbjct: 1   MFLNEHQSKRLFEEAGIETPQGIMTDSA-GIEGCLPPFDAPWFV-KAQVLAGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR    L  +    ++ILG  +        G  V  V +E    I RE Y+
Sbjct: 56  -------GGVRRADDLAGLRDVAKDILGMRIG-------GHAVPFVRIEPATAIARECYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LEL 179
           S +V R    + F AS  GG+++E         +      PL G   E V       + +
Sbjct: 102 SFMVSRKRRELLFTASGSGGVEVESGQGALVCAV------PLTGEMPEHVIRSAFFCIGV 155

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      +    L+ A  D  + L E+NPL++  +GR   LD K+  DDN +    D+
Sbjct: 156 GREHWAGFREFVLRLHGAVRDYGLLLAEVNPLVLTGDGRWLALDGKVEVDDNVVDIRPDL 215

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
                       E  A++  LSY+ L G +G +VNGAGLAMATMD++   G A ANF+D+
Sbjct: 216 LRFHTPEHLAPEENAAREAGLSYVELKGWVGLLVNGAGLAMATMDLLNFSGLAAANFMDL 275

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  ++  A +++  +  V+ + +N+FGGI+ C  +   ++ A+ + +   P+V+R+
Sbjct: 276 GGAADVPRMRRALELLFGNPQVRVVCVNLFGGIVSCAAVAGALVEALGDGRAAKPVVVRM 335

Query: 360 EGANVDIGNRLIAESGLN-VITAIDLDDA 387
           +G     G +L+       V  A D+D A
Sbjct: 336 DGFEAAEGRQLLERRAHPDVHVARDIDHA 364


>gi|89893728|ref|YP_517215.1| hypothetical protein DSY0982 [Desulfitobacterium hafniense Y51]
 gi|219668103|ref|YP_002458538.1| succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
 gi|89333176|dbj|BAE82771.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538363|gb|ACL20102.1| Succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
          Length = 390

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 114/401 (28%), Positives = 204/401 (50%), Gaps = 22/401 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+AK +  KY +P+ +  + ++   A      +  P+ VVK+Q+ AGGRGK    
Sbjct: 1   MYLYEYEAKEVFSKYGIPLGQNGIATNPAEAGMICAGIGKPV-VVKAQVMAGGRGKAGLI 59

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              AD +   +  +          +ILG           G +V  + +E+  +I RE+Y 
Sbjct: 60  LPAADPEAAAKAAA----------QILGKE-------HHGEQVKKLLIEEQIEIAREVYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D T G    + S QGGM+IE +A   P+ + K  IDP   V    +  L      +
Sbjct: 103 SITMDFTEGKPVMMVSAQGGMEIESLAAANPELLIKEHIDPWREVFGHRLRDLWRRAGFR 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G   ++  ++   L + F + D    EINPL++ + G++   D+K+  DD A +R  +I 
Sbjct: 163 GGQVVELENILGRLVRVFLETDALTAEINPLVMTQEGKIIAADAKLILDDEASFR-SEII 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
                 E +  E  A   N++Y++++  G+IG +  GAGL+MATMD +   G  PA F+D
Sbjct: 222 RNASRPEINPLEKRAGDLNVTYVSIEEGGDIGIIAGGAGLSMATMDAVYGIGAKPAAFID 281

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           +GGG  ++++  +  ++T   +++GI+IN+FGGI  C  +  G+   + E   ++ +V++
Sbjct: 282 LGGGISRERMKESLLLMTETPNLRGIIINVFGGINNCLTMAAGLADFLDEKPTDVKIVVK 341

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH-AVKGV 398
           + G   + G R++   G+  +     D A + ++    K V
Sbjct: 342 MRGHEQEEGWRILERYGIPTVKFETTDVAIRLLMQVLAKEV 382


>gi|205373359|ref|ZP_03226163.1| succinyl-CoA synthetase subunit beta [Bacillus coahuilensis m4-4]
          Length = 206

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 125/205 (60%), Positives = 162/205 (79%)

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
              LY  F +KD S+ EINPL++  +G +  LD+K++FD NALYRH DI E RD+ EED+
Sbjct: 1   MMGLYTVFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHKDILEYRDLDEEDA 60

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           +EIEA +++LSYI+L GNIGCMVNGAGLAMATMDIIK YGG PANFLDVGGGA  +KV  
Sbjct: 61  KEIEASKYDLSYISLFGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVGGGATAEKVTE 120

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AFKII SD +VKGI +NIFGGIM+CD++  G++ A K+V++ +PLV+RLEG NVD+G ++
Sbjct: 121 AFKIILSDENVKGIFVNIFGGIMKCDIIASGVVEAAKQVELTVPLVVRLEGTNVDLGKKI 180

Query: 371 IAESGLNVITAIDLDDAAQKIVHAV 395
           ++ESGLN+I A  + D A+KIV  V
Sbjct: 181 LSESGLNIIAAESMADGAEKIVAQV 205


>gi|225574243|ref|ZP_03782853.1| hypothetical protein RUMHYD_02307 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038533|gb|EEG48779.1| hypothetical protein RUMHYD_02307 [Blautia hydrogenotrophica DSM
           10507]
          Length = 373

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 119/399 (29%), Positives = 202/399 (50%), Gaps = 31/399 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EY+ K L+R++ +PV +  +I+       A   +P P +V+K+Q+  GGRGK    
Sbjct: 1   MDLFEYEGKQLMRQFEIPVPESCLITDSE----ATPPMPYP-FVLKAQVMTGGRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +  +      + IL   +          RV+ +  E      RELYL
Sbjct: 53  -------GGVKVCADEREFEIHKKNILNMEIKN-------HRVHGLLAEQMVKAKRELYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +   S     IAS  GGMDIE+++++ P +I K+ IDP  G+       L   LE++
Sbjct: 99  SITLQGVS-KPTLIASRMGGMDIEQISRETPDEIVKMEIDPFTGLKGYQKKYLAKRLEIE 157

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +   D       + +AF D    L+EINPL ++ +GRL  +DSK S DD+       ++
Sbjct: 158 DKQ--DFYQFIGKVERAFFDTGAKLVEINPLGVV-DGRLMAMDSKFSLDDHVKKMQGTVE 214

Query: 241 ELRDVSEEDSRE--IEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
           +L    E+  R    E +   ++Y+ LDG+IG + +GAG  M T+D++   G   A+F +
Sbjct: 215 QLEKDREKLYRYQAPEKEMTTITYVPLDGDIGLISDGAGTGMLTLDLLNDEGLHVASFCE 274

Query: 299 VGGGADQDKVAAAFKI-ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           +GG   ++ +  A  + +T    +KG+LI + GG  R D +  GI   VKE ++ IP+  
Sbjct: 275 LGGMTTEEVMYRAMDLTLTGHPQIKGVLIVLIGGFNRMDNMALGITKYVKEHQVKIPIYT 334

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           R+ G   ++G + +  +G++      L +  + +   VK
Sbjct: 335 RMCGTMEEVGLKTMEAAGMSTYNV--LTETVKDLAKTVK 371


>gi|325264240|ref|ZP_08130972.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
 gi|324030724|gb|EGB92007.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
          Length = 376

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 120/393 (30%), Positives = 195/393 (49%), Gaps = 29/393 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M+  E + K  L ++ +P+   ++   +V      +  +P P  V+K QI +G RGK   
Sbjct: 1   MDYLEIEGKKQLNRFGIPINDSILLTENVD-----LTKVPYPC-VLKGQILSGKRGKA-- 52

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G VRV  S + +   ++EI+    I       G  +  +       I+ E Y
Sbjct: 53  --------GAVRVVKSEEELKE-VKEIIEKITI------NGKSMEGIIACGFLPIVEEYY 97

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           + + +D  +  V  + +  GGMDIEE+A   P+K+ +  +D   G           + EL
Sbjct: 98  MGMTLDVKNRAVIMLFTPFGGMDIEELATTSPEKLMR--LDCTEGFDEAAFRESAKIFEL 155

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +      D+   L  A    D + +E+NPL ++++G +  +D+K+  DDN+LYR  D 
Sbjct: 156 PDERLNKIVDIAKKLSTACFALDSTTIEVNPLAVLEDGSVVAIDAKLVIDDNSLYRQEDY 215

Query: 240 QEL-RDVSEEDSREIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
             L R   ++  +E++A +H+L+Y+ LD  GNIG M  GAG+ MATMD I+ YGG   NF
Sbjct: 216 TILPRTSQQKSLQELDAAEHDLTYVELDPNGNIGTMAGGAGIGMATMDTIRHYGGKVNNF 275

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LD+GGG   +K   A +I+  + +   IL+N+FGGI  C  +  GI  A KE   N  +V
Sbjct: 276 LDLGGGVTSEKTYQAMRILLQNENTDMILVNVFGGINNCADMADGIARAYKEFGNNKKVV 335

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           ++  G N + G  +  + G +       D+A Q
Sbjct: 336 VKSRGFNQEQGWEIYEKLGFSQTKYGTTDEAVQ 368


>gi|89894672|ref|YP_518159.1| hypothetical protein DSY1926 [Desulfitobacterium hafniense Y51]
 gi|219669113|ref|YP_002459548.1| succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
 gi|89334120|dbj|BAE83715.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539373|gb|ACL21112.1| Succinate--CoA ligase (ADP-forming) [Desulfitobacterium hafniense
           DCB-2]
          Length = 425

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/395 (26%), Positives = 167/395 (42%), Gaps = 50/395 (12%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
            EYQ K  L K  +PV KG   S+   A  A + + GP+ V K Q+ AGGRGK       
Sbjct: 5   LEYQGKEWLAKAGMPVPKGRPASTPEEAREAAEWIGGPVAV-KGQVQAGGRGKA------ 57

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               G V++ ++     +   EIL  T+        G  V  V VE+  DI +E Y S +
Sbjct: 58  ----GIVKLVNTPDEAAAAAAEILSKTV-------KGLPVRKVLVEEKLDIKKEFYCSFV 106

Query: 124 VDR--TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           V+    +     + S +GGMDIE V +    K+ K+ +DP+ G+ + D   L     +  
Sbjct: 107 VNGAKEARSPMLMFSVEGGMDIESVPE---DKLLKINVDPINGLQTYDAVDLAAKAGIAP 163

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
           +           L + +   D   LEINP ++  NG L   D K+  D++++ RH +   
Sbjct: 164 EELTKFAKFLTKLSQTYKKYDCMTLEINPFVMTGNGNLICADCKMEIDNSSVGRHPEFGF 223

Query: 242 --LRD----VSEEDSREIEAKQHN---------LSYIAL-DGNIGCMVNGAGLAMATMDI 285
              RD     +E D      ++ +         + Y  +  G +G    G G AM  +D 
Sbjct: 224 DIARDLPGEPTELDYIGWSIEETDARGTGFLMNMGYDEVSPGYVGYHPIGGGSAMMGLDA 283

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL----VKG 341
           +   G  PAN+ D  G     K+    K + S  ++ G L+   GG M  +         
Sbjct: 284 LNQVGLKPANYADTSGNPVASKIYRVAKSVLSQPNIDGYLL---GGFMMANQEQWHHAHA 340

Query: 342 ILSAVKEV----KINIPLVMRLEGANVDIGNRLIA 372
           I+  ++E+    K  +P V+ L G   D    ++ 
Sbjct: 341 IVKVLREILPTQKPGLPCVLLLCGNREDESLEILK 375


>gi|330834511|ref|YP_004409239.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Metallosphaera
           cuprina Ar-4]
 gi|329566650|gb|AEB94755.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Metallosphaera
           cuprina Ar-4]
          Length = 336

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 134/397 (33%), Positives = 194/397 (48%), Gaps = 62/397 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++EY+ K +     +P+ KG V+ S                VVK+Q+  GGRGK    
Sbjct: 1   MKLYEYEGKKIFSIVGIPIPKGQVVYSPVNVP--------GKVVVKAQLLEGGRGKRGLV 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +  DS   +                             G  ++   +E+     RE+Y+
Sbjct: 53  RVTEDSFSTI-----------------------SDMMKEG--ISTFLIEEFVSHDREIYI 87

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S ++DR SG    I S  GG++IEE      + +   +I     +   DV ++   +  +
Sbjct: 88  SAMMDRESGNPMIIISPNGGINIEES-----KDVRTFVIPLDRTLMRYDVDAMEKYVGYR 142

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   L K   + D  L EINPL I + G L  LDSK+  DDNAL+RH ++ 
Sbjct: 143 G-----LTPIVQGLLKLLLEYDAELAEINPLAITERGAL-ALDSKVILDDNALFRHEELL 196

Query: 241 -ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
            ELR            K  + SY+ LDG+IG + NGAGL MATMD++KL GG PA+F DV
Sbjct: 197 NELR----------REKPASDSYVELDGDIGIIGNGAGLTMATMDLVKLMGGNPADFFDV 246

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGAD  KVA A + + ++  VK I+INIFGGI RCD + KGIL      K+N P+ +RL
Sbjct: 247 GGGADMQKVAFAIERVGTNPRVKKIVINIFGGITRCDEVAKGILDG--HSKVNKPIYVRL 304

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            G   D G  ++ ++G+ V      +DA   I  A++
Sbjct: 305 TGTKEDEGKEILTKAGIKVY-----EDALSAIGDALR 336


>gi|322702427|gb|EFY94077.1| succinyl-CoA synthetase beta chain [Metarhizium anisopliae ARSEF
           23]
          Length = 353

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 114/328 (34%), Positives = 176/328 (53%), Gaps = 27/328 (8%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +L   L+TK  G  G  V  ++V + A    + YL++ +DR +   A I S +GG++++ 
Sbjct: 1   MLNQRLLTKDNGTDGHVVEKLFVAEAATYDSQWYLAMTIDRENYQPAIIVSKEGGVELDV 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +  + P  +F        G+T+  V  +   L    Q   +   +   LY  F D++ + 
Sbjct: 61  LISERPDSLFTFGFGISEGITNALVQDIQQRLGTTDQETANLTHILTQLYSIFRDREATH 120

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LEINPL    +G    L++   FD  A  R  ++  LRD ++E   E+EA++H L Y+ +
Sbjct: 121 LEINPLGRSLDGSFTSLNANFKFDKAAEQRQEEVSALRDKAQEVPDEVEAEKHGLVYVRM 180

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           DGNIG +VNGAGLAMAT D I  +GGA ANFLD GG A +D +  AF+IIT D  VK IL
Sbjct: 181 DGNIGNVVNGAGLAMATNDAIGFHGGASANFLDAGGKATKDTMIQAFRIITRDERVKAIL 240

Query: 326 INIFG------------------GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           +NI+G                  GI +CD++ + I+ A  E+ I +P+V+RL+G N + G
Sbjct: 241 VNIYGGTYVIGRWSMGKLTGGRVGITQCDMIAESIIGATSELDIQVPMVVRLQGTNSEKG 300

Query: 368 NRLIA---ESGLNVITAIDLDDAAQKIV 392
            ++++   E  + V T+      A K V
Sbjct: 301 LKMVSVYDEVKIEVRTS------ADKAV 322


>gi|317153396|ref|YP_004121444.1| ATP-grasp domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943647|gb|ADU62698.1| ATP-grasp domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 692

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 114/396 (28%), Positives = 183/396 (46%), Gaps = 22/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M ++E+ +KAL  K  +PV +G+ +      E+ +     P +++K+Q   GGRGK    
Sbjct: 1   MLLNEHMSKALFNKAGIPVPQGLSVFPGSE-ETVVPDFALP-WILKAQALTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV             R I G  +        G  V  + VE    I RE YL
Sbjct: 56  -------GGVLRVDDAHDFAPTARRIFGLNI-------QGHSVPFIRVEPAVIIDRECYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL V R+ G +      +GG++IE   +     +    I    G+ +  + +    L L 
Sbjct: 102 SLSVSRSRGCILLTVGREGGVEIESGGRAN---LLVQEIHLPAGLAANQIRAAFFHLGLD 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                D   L    +KA  D  + L EINPL++  + R   LD K+  DDN    +  ++
Sbjct: 159 KALFGDFSALLATFFKAMLDNGLLLAEINPLVLTGDNRFLALDGKVEVDDNFAELNPAME 218

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
                      E  A+   LSY+ LDG +G MVNGAGLAMATMD++        NFLD+G
Sbjct: 219 TYYQPEHASHEENVARAAGLSYVKLDGWVGLMVNGAGLAMATMDLLNFSRLPARNFLDLG 278

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  A +++  D+ V+ + IN++GGI+ C  +   +  A+ + + + P+V R+ 
Sbjct: 279 GAADHTRMRTALELLFGDARVRAVFINMYGGILSCRNVALALREALGDREPDKPIVARMS 338

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G +   G  ++   G + +       AA +I+  +K
Sbjct: 339 GNDAAGGIEVLRAMGCDTVHIASDMQAAIRILETLK 374


>gi|319653328|ref|ZP_08007429.1| hypothetical protein HMPREF1013_04046 [Bacillus sp. 2_A_57_CT2]
 gi|317394977|gb|EFV75714.1| hypothetical protein HMPREF1013_04046 [Bacillus sp. 2_A_57_CT2]
          Length = 399

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 196/411 (47%), Gaps = 41/411 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +L++  +PV    VISS       I        V+K+ +  G RGK           
Sbjct: 9   SKTILKENGIPVPGHSVISSSEQ---IIDQHLVKPCVIKALVPVGKRGKA---------- 55

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           G ++   +++       EI   T+           V  V +E+  DI  E Y+S+ +D  
Sbjct: 56  GAIKFADTVEEAKVKADEIFQMTVRNF-------PVEKVLIEEKIDIDEEWYVSITIDPQ 108

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             + A I +T+GG+++E++ KD P+K+    ++P   +       +   L + G+     
Sbjct: 109 KQVPAIIVTTEGGVEVEDLVKDAPEKVVIYHVEPFNELHPFQAKEIWSELGITGKPLTKA 168

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL----- 242
             +   LY+ F   D  +LEINPL++ K+ ++    S +  DD+ALYRH +++ +     
Sbjct: 169 AAILCKLYQVFLKYDCYILEINPLVLTKDEKVMAAASVMGVDDSALYRHPELEGMVESGS 228

Query: 243 ----RDVSEEDSREIEAKQHNL----SYIALD-GNIGCMVNGAGLAMATMDIIKLYGGAP 293
               R +++ +   ++    +      Y  +D G IG M  G G ++ + D +   G  P
Sbjct: 229 ERSWRPLTQLEKEMVKVNDADYRGTARYTEMDGGEIGFMCGGGGGSLLSFDALANLGVVP 288

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILI--NIFGGIMRCDVLVKGILSAVKEVKI 351
           AN+ + GG   ++KV    K I S   VKG+ +  NI     + DV+ KGI++A++E+ I
Sbjct: 289 ANYTETGGNPPEEKVKGLTKGILSKQGVKGLFVAHNITNN-TQIDVMAKGIVTAIQELGI 347

Query: 352 NI---PLVMRLEGANVDIGNRLIAESGLNVITAI-DLDDAAQKIVHAVKGV 398
           +    P+V+R  G N + G ++  E+G+        +++AA ++V  ++GV
Sbjct: 348 DPKVFPIVVREAGVNDEEGKKIFQEAGITYFGEDLTIEEAAAEMVKKMRGV 398


>gi|213584707|ref|ZP_03366533.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 215

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/225 (40%), Positives = 126/225 (56%), Gaps = 10/225 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           G+       +F  L   F ++D++L+EINPL+I K G L  LD K
Sbjct: 171 GKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGK 215


>gi|325290303|ref|YP_004266484.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324965704|gb|ADY56483.1| succinyl-CoA synthetase (ADP-forming) beta subunit
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 424

 Score =  262 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 110/404 (27%), Positives = 178/404 (44%), Gaps = 49/404 (12%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
            EYQ K+ L K  +PV KG   S+   A+   + + GP+ V K QI AGGRGK       
Sbjct: 5   LEYQGKSWLAKAGMPVPKGRPASTPQEAKEVAEWIGGPVAV-KGQIQAGGRGKA------ 57

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               G V++ ++ +   +   EIL  T+        G  +  V +E+  DI +E Y S +
Sbjct: 58  ----GIVKLVNTPEEAEAAAAEILAKTI-------KGLPIRQVLIEEKLDIKKEFYCSFV 106

Query: 124 VD--RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           ++  R +     + ST+GGMDIE V +   + + K+ +DP+ G+ + D   L     +Q 
Sbjct: 107 INNSREARSPMVMFSTEGGMDIESVPE---ELLIKVNVDPIKGLQTYDAIDLAVKAGIQA 163

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD--I 239
           +        F  L + F   D   LEINP I+   G L   D K+  D++A+ RH +  I
Sbjct: 164 KDLTKFASFFTRLSQTFKKYDCQTLEINPFIMTGKGDLICADCKMEIDNSAVGRHPEFGI 223

Query: 240 QELRD----VSEEDSREIEAKQHN---------LSYIAL-DGNIGCMVNGAGLAMATMDI 285
           +  RD     +E D      ++ +         + Y  +  G IG    G G AM  +D 
Sbjct: 224 KIARDLPGEPTELDIIGWSIEETDARGTGFLMNMGYDEVSPGYIGYHPIGGGSAMMGLDA 283

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL----VKG 341
           +   G  PANF D  G     K+    K + S  ++ G ++   GG M  +         
Sbjct: 284 LNQVGLKPANFADTSGNPVGSKIYRVAKCVLSQPNIDGYVL---GGFMMANQEQWHHANA 340

Query: 342 ILSAVKE---VKINIPLVMRLEGANVDIGNRLIAESGLNVITAI 382
           ++  ++E    K  +P V+ L G   D    ++ +   ++IT  
Sbjct: 341 MVKVLREELPKKPGLPCVLLLCGNREDESLEILRKGLADLITPD 384


>gi|284045663|ref|YP_003396003.1| succinate--CoA ligase (ADP-forming) [Conexibacter woesei DSM 14684]
 gi|283949884|gb|ADB52628.1| Succinate--CoA ligase (ADP-forming) [Conexibacter woesei DSM 14684]
          Length = 403

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 189/420 (45%), Gaps = 41/420 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   EY+++ ++ K  +PV++     +   A    + +  P+ V+KSQ+  GGR K    
Sbjct: 1   MRFFEYESRQIVAKAGIPVSRHGFARTADEARRIAEEIGEPV-VIKSQVLTGGRMKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +     +   +IL       Q    G     V V+   D+ +E Y 
Sbjct: 57  -------GGVKFADTPDEAAAHAADIL-------QLEINGHMPRGVLVDSRVDVKQEFYA 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            ++ D        + S  GG+DIEEVA+ +P ++ +     L  V+  +   +   + + 
Sbjct: 103 GVVWDGIRKQPVMLFSDMGGIDIEEVAETHPDRVGRAHFSNLGEVSDYEAKQVIASIGVT 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD-I 239
           G A      +   L + F ++DM+L EINPL  +++GR   +D+ +  ++ A  R    +
Sbjct: 163 GSALTRATPILVRLARLFVERDMTLAEINPLAQLQDGRFVAVDAHMDMENEARPRQKKLL 222

Query: 240 QELRDVSEEDSREIEAKQHNL---------------SYIALDGNIGCMVNGAGLAMATMD 284
            EL    EE  +  EA +  L               +    DGN+G ++   G ++   D
Sbjct: 223 AELGVGDEETRQAREATEFELAGEAVDAASHRGVAGNVTEFDGNLGLVIGAGGGSLTLFD 282

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI--NIFGGIMRCDVLVKGI 342
            ++ +GG PAN+ ++GG    +K     K++     V  I +  +I     R D++ +G+
Sbjct: 283 AVRAHGGKPANYCEIGGNPSVEKACGLAKLVLQKPGVDKIAVMMSIVSN-TRVDIVARGV 341

Query: 343 LSAVKEVKIN---IPLVMRLEGANVDIGNRLIAESGLNVI-TAIDLDDAAQKIVHAVKGV 398
           + A  E+  +      + R+ GA  D G +++ + G+     ++ + +AA++ V  ++GV
Sbjct: 342 IKACVELGYDPAEKIAIFRIPGAWEDEGFKILEKYGVEYCDRSVSMHEAARRAVEKIEGV 401


>gi|116283894|gb|AAH52774.1| Sucla2 protein [Mus musculus]
          Length = 224

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 111/208 (53%), Positives = 153/208 (73%)

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
               Y  F   D +++EINP++   +G++  +D+KI+FD N+ YR   I +L+D S+ED 
Sbjct: 1   MIKFYNLFLKHDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIFDLQDWSQEDE 60

Query: 251 REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAA 310
           R+ EA   +++YI LDG+IGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  
Sbjct: 61  RDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVQQVTE 120

Query: 311 AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
           AFK+ITSD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    L
Sbjct: 121 AFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKAL 180

Query: 371 IAESGLNVITAIDLDDAAQKIVHAVKGV 398
           IA+SGL ++   DLD+AA+ +V   + V
Sbjct: 181 IADSGLKILACDDLDEAAKMVVKLSEIV 208


>gi|195953640|ref|YP_002121930.1| Succinate--CoA ligase (ADP-forming) [Hydrogenobaculum sp. Y04AAS1]
 gi|195933252|gb|ACG57952.1| Succinate--CoA ligase (ADP-forming) [Hydrogenobaculum sp. Y04AAS1]
          Length = 423

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 110/402 (27%), Positives = 180/402 (44%), Gaps = 52/402 (12%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSV-HAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           MN++E++A   + +KY VPV   +    +    +     L     VVKSQ+  G RGK  
Sbjct: 1   MNLYEFEAYDKIFKKYGVPVLNYMYADHINDDLKDFANKLGES--VVKSQVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V++  + +  I   + +L       Q    G     + + + A IL+EL
Sbjct: 58  ---------GAVKLCKTPEEAIETAKALL-------QYPVYGEMPVGIIIAEKAKILKEL 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+     +     + S +GGMDIEEV    P+K+    IDPL+G+    V      + 
Sbjct: 102 YASITYSTETRTPVLVLSLEGGMDIEEVP---PEKVRTFKIDPLVGLYPYMVREYLMDMG 158

Query: 179 LQGQ---ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK---NGRLRVLDSKISFDDNA 232
              +      +  ++  NLYKAF + +  L+EINPL I       ++  LD+ ++ DD+A
Sbjct: 159 FPKEYIGVLRELSEVIANLYKAFWETEAKLIEINPLAICDVNGKQKVYALDAVVTIDDDA 218

Query: 233 LYRHLDIQELRDVSEEDS--REIEAKQHN--------LSYIALDGNIGCMVNGAGLAMAT 282
                 I  +R   +     REIEA   +         SY+ +DG+I  M  G G +  T
Sbjct: 219 SIPPTKIYGVRSAMKRPPTQREIEASLIDRDDHRGKAGSYVEMDGDIALMTFGGGGSTVT 278

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---- 338
           ++     G  PANF D+GG    +K+     II S   +KG+L+   GG      +    
Sbjct: 279 IETCYNIGLKPANFTDIGGNPPAEKMYKITHIILSKPGIKGVLV--CGGTSNNTRIDVTL 336

Query: 339 VKGILSAVKEVK------INIPLVMRLEGANVDIGNRLIAES 374
            +G+ +A++++K       N   V+R  G   + G R++ E+
Sbjct: 337 GEGVANAIRDLKKEGKLDPNWVWVVRRNGPEAEKGLRMLYEA 378


>gi|213621814|ref|ZP_03374597.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 216

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 122/214 (57%), Positives = 164/214 (76%)

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELR 243
                 +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++E+R
Sbjct: 2   VQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMR 61

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA 303
           D S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVGGGA
Sbjct: 62  DQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGA 121

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
            +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLEG N
Sbjct: 122 TKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNN 181

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 182 AELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 215


>gi|325264212|ref|ZP_08130944.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
 gi|324030696|gb|EGB91979.1| succinyl-CoA synthase, beta subunit [Clostridium sp. D5]
          Length = 377

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 122/401 (30%), Positives = 201/401 (50%), Gaps = 28/401 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M+  E + KA L+++ +PV   ++++     ++  + +  P  V+K QI +G RGK    
Sbjct: 1   MDYLEIEGKAQLKRFGIPVNDSILLN----GDNIPEEVTYPC-VLKGQILSGKRGKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  G VRV  S +      +       + ++    G  +  V       I  E YL
Sbjct: 53  -------GAVRVVKSEEEFREVKK-------VIEEITINGKHMEGVAACGFLPIADEYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            + +D    ++  + +  GGM+IEE+A + P+K+ +   +   G   E       + +L 
Sbjct: 99  GMTLDVKERVMVMLFTPYGGMEIEELAVNAPEKLLR--FNCTAGFDREVFLGEASVFDLP 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      D+   L +A  + D + +EINPL ++++G +  LDSK+  DDN+L R  D  
Sbjct: 157 KERLNKVADIAEKLCRACFELDATTMEINPLAVLEDGSMLALDSKLVIDDNSLVRQGDYT 216

Query: 241 EL-RDVSEEDSREIEAKQHNLSYIALD--GNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            L R   ++  +E +AK H+L+Y+ L+  G+IG M  GAG+ MATMD I+ YGG   NFL
Sbjct: 217 ILPRTAQKKSPQEEDAKAHDLTYVELNPEGDIGTMAGGAGIGMATMDTIRHYGGCVNNFL 276

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D+GGG   +K   A KI+  + S   IL+N+FGGI  C  + +GI  A KE+ I   +V+
Sbjct: 277 DLGGGVTAEKTYHAMKILLQNKSTNYILVNVFGGINNCADMAEGIARAYKELGIQKTVVV 336

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +  G N + G  +    G         D+A Q ++  +KGV
Sbjct: 337 KSRGFNQEQGWTIYENLGFLQTKYGTTDEAVQTLMK-IKGV 376


>gi|332704472|ref|ZP_08424560.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554621|gb|EGJ51665.1| succinyl-CoA synthetase, alpha subunit [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 721

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 180/388 (46%), Gaps = 25/388 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E  +K L R+  V V  G  +          +    P + +K+Q+  GGRGK    
Sbjct: 1   MLLDEQASKRLFREAGVSVPDGECVEPGSE--DGFRPSFPPPWYLKAQVLTGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV      +++    RE+    +        G R   + +E   D +RE Y+
Sbjct: 56  -------GGVLRVDDARALPGRARELFAKDI-------RGHRPPYLLLEPAVDFVRECYV 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  V R    +    S +GG+D+E  A      +   +I    G    ++ +    L++ 
Sbjct: 102 SFAVSRDRASLVLSVSPRGGVDVERSAD-----VLTQVIPLPAGPAERNMRAAFFHLKVG 156

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +      +L   L+ A     + L EINPL++ ++GR   LD K   DDNA     +++
Sbjct: 157 KEYWPGFRELVLRLFDAVRQNSLLLAEINPLVLTRDGRWLALDGKAEIDDNAAALRPELE 216

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D       ++ A+   +S++ L G +GCMVNGAGLAMATMD++ L G   ANFLD+G
Sbjct: 217 RWYDPRHHAHDDVRARDEGMSFVKLGGWVGCMVNGAGLAMATMDLLNLAGLPAANFLDLG 276

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  A +++     V+ + IN+FGGI+ C+ + + +   +   +   PLV+R+ 
Sbjct: 277 GAADSRRLDRALRLLFEGRDVRVVFINLFGGILSCEKVAQALADVLAGNEPAKPLVVRMA 336

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDA 387
           G     G RL+    L+ +    D+  A
Sbjct: 337 GNGASEGRRLLEGLNLHGLTLVEDMTQA 364


>gi|289547975|ref|YP_003472963.1| succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484]
 gi|289181592|gb|ADC88836.1| Succinate--CoA ligase (ADP-forming) [Thermocrinis albus DSM 14484]
          Length = 432

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 189/430 (43%), Gaps = 59/430 (13%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSV-HAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           MN++EY+A   + +K+ +PV + +    V       I  L     VVKSQ+  G RGK  
Sbjct: 1   MNLYEYEAYDKIFKKFGIPVPRYMFADHVNDQLVEFINQLG--ECVVKSQVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V+V  + +  +  +  +L       Q    G     V V + A+IL+EL
Sbjct: 58  ---------GAVKVCKNPEEAVETVEALL-------QYPVYGEMPVGVLVVEKANILKEL 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+             S +GGMDIEEV    P+K+   +IDPL G+    V +    L 
Sbjct: 102 YASITYSTEVRAPVVTLSLEGGMDIEEVP---PEKVRSWVIDPLKGLYPHMVRNYLLELG 158

Query: 179 LQ---GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNA 232
                     +  ++  N+++AF + +  LLEINPL I + G   ++  LD+ ++ DD+A
Sbjct: 159 FPQEYMGVLRELSEVIANMWRAFWESEARLLEINPLAICQVGDKQKVLALDAVVTIDDDA 218

Query: 233 LYRHLDIQELRDVSEEDS--REIEAKQHN--------LSYIALDGNIGCMVNGAGLAMAT 282
                 I  +R   +     REI+A   +         SY+ +DG+I  M  G G +  T
Sbjct: 219 SVPPTKIYGVRTALKRPPTEREIQASLIDRDDHRGKAGSYVEMDGDIAMMTFGGGGSTVT 278

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---- 338
           ++     G  PANF D+GG    +K+    +II S   ++G+L+   GG      +    
Sbjct: 279 IETAYAVGLKPANFTDIGGNPPAEKMYKITRIILSKPGIRGVLV--CGGTANNTRIDVTL 336

Query: 339 VKGILSAVKE------VKINIPLVMRLEGANVDIGNRLI----AESGLNVITAID---LD 385
            +G+ +A+++      +  N   V+R  G   + G R++     E G+          L 
Sbjct: 337 GEGVANAIRDLYKEGKLDPNWIWVVRRNGPEAEKGLRMLYEAFKECGVKGEIYDSTLPLT 396

Query: 386 DAAQKIVHAV 395
           +A  ++   +
Sbjct: 397 EAPIRLKELL 406


>gi|241068532|ref|XP_002408461.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
 gi|215492449|gb|EEC02090.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
           [Ixodes scapularis]
          Length = 210

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 121/210 (57%), Positives = 158/210 (75%)

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS 246
             ++  ++Y AF + D + +EINPLI+  +G L  LD+KI+FDDN L++H +I  +RD  
Sbjct: 1   MKEIVKSVYNAFIETDAAQIEINPLIVNSDGNLLALDAKITFDDNGLFKHPNITAMRDHD 60

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           EED  E  A    LSY+ +DGNIGCMVNGAGLAMATMDIIKLYG +PANFLDVGGGAD++
Sbjct: 61  EEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGASPANFLDVGGGADRE 120

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
           +V  A KII SD  V+GIL+NIFGGIMRCD++ +GI++A KE+ I +PLV+RL G NV+ 
Sbjct: 121 RVKEALKIILSDKEVQGILVNIFGGIMRCDIIAEGIIAAAKEIGIKVPLVVRLAGTNVEK 180

Query: 367 GNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G  +++ SGL +I A DL DAA KIV A+K
Sbjct: 181 GKEILSNSGLEIIPAHDLADAASKIVEAIK 210


>gi|186685262|ref|YP_001868458.1| ATP-grasp domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186467714|gb|ACC83515.1| ATP-grasp domain protein [Nostoc punctiforme PCC 73102]
          Length = 408

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 172/428 (40%), Gaps = 58/428 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I      +     +  P+ V+KSQ+H   R K    
Sbjct: 1   MDLLEYQVKEWFGKIGIPVLPSQRIDHPTDLKR--LKIRFPI-VLKSQVHGAERAKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR   +    I+  + I    +        G     V  E   D  +E YL
Sbjct: 55  -------GGVRFAETTIDAIAAAQNIFSLPI-------WGELPEVVLAESQYDANQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        +   +  +D E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTAVCRPVLLGCKEADIDWESAGEKMHHVVVEQEFSPFY------ARRLALKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y  F  KD+ L+EINPL +  NG++  L+ K+  ++ A+ RH D+ 
Sbjct: 155 GTLMQSVSSVLEKMYHLFVQKDLDLVEINPLAVSANGQVMALNGKVRINERAIKRHPDLA 214

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL- 297
           E+  + +S   S EI     +   + + G IG + NG G  MAT+D++   GG P   L 
Sbjct: 215 EMAAKIISRHTSTEINGILGDWDGVKMHGKIGILGNGTGSVMATLDLVANAGGNPGVCLN 274

Query: 298 -------DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
                  D      +D++    KI+ +D  ++ ILIN  G I + + +VK I   V++  
Sbjct: 275 LRHAFLTDTTPTTFRDRLETGLKILEADKGIQVILINFLGSIPQTEEVVKVIARVVQQDN 334

Query: 351 INI-------------------PLVMRLEGANVDIGNRLIAESGLN---VITAIDLDDAA 388
             +                   PLV+RL G+  +   + +A    +   ++   +LD+A 
Sbjct: 335 SELESQVVRSNGSKSRQVQNFTPLVIRLAGSEFNAARKYLATLKTHSDALLVVENLDEAV 394

Query: 389 QKIVHAVK 396
              V   K
Sbjct: 395 AAAVRLAK 402


>gi|113476345|ref|YP_722406.1| succinyl-CoA synthetase subunit beta [Trichodesmium erythraeum
           IMS101]
 gi|110167393|gb|ABG51933.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Trichodesmium
           erythraeum IMS101]
          Length = 405

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 186/433 (42%), Gaps = 65/433 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL  +  +PV     I      +     +P P+ V+KSQ+H G R      
Sbjct: 1   MDLLEYQAKALFSEMGIPVLPSQRIDYPKDLKK--LKIPYPV-VLKSQVHTGERS----- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                S GG++   +    ++  + I    +              +  E   +  +ELYL
Sbjct: 53  -----SLGGIKFVENTIDAVAAAQTIFNLPI-------KDEYPAVLLAEAKYNADQELYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + S QGG+D E   K   + +      P           L   + L+
Sbjct: 101 AVVLDPIVRRPVLLGSKQGGIDTETAIKSMQKVVVNQEFSPFY------ARRLMVKIGLE 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   +Y+ F +KD+ ++EINPL I   G +  LD K+S +D AL RH ++ 
Sbjct: 155 GKLIELVSHIVEKMYQLFVEKDLDMIEINPLGISPKGEVMALDGKVSVNDYALGRHPELL 214

Query: 241 ELRDVSEEDSREIEAKQ--------------------------HNLSYIALDGNIGCMVN 274
            +   +  D+ EI+ K+                          + L +  L GNIG + N
Sbjct: 215 SIVGQNISDNYEIKQKEVKEIEDSSLLVFNNINAVSNRKIIPDYRLKFKELQGNIGILCN 274

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQD-------KVAAAFKIITSDSSVKGILIN 327
           G GL MAT+D++    G PANFL++  G   +       ++  A  +++   ++K +LIN
Sbjct: 275 GKGLTMATVDMVIQAQGKPANFLNIKLGDYLEVKNSLRSQMFTALDLVSQRDNIKVVLIN 334

Query: 328 IFGGIMRCDVLVKGILSAVKEV----KINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           + G +   D L+  +   + ++    +  I  V+RL G  +      +  S L V    +
Sbjct: 335 VIGIVETSDELITIVYEYLNKLTSIDQKKIRFVLRLLGGRISKARERL--SDLPVEVIEN 392

Query: 384 LDDAAQKIVHAVK 396
           L+DA  + V+  K
Sbjct: 393 LEDAVSQAVYLSK 405


>gi|315049905|ref|XP_003174327.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893]
 gi|311342294|gb|EFR01497.1| succinyl-CoA ligase subunit alpha [Arthroderma gypseum CBS 118893]
          Length = 687

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 100/287 (34%), Positives = 155/287 (54%), Gaps = 21/287 (7%)

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             L++ VDR S       S     +      +Y  +             + D+AS+ D+L
Sbjct: 414 FTLAIAVDRKSCGPCIAVSNSTDGNTHRFPFNYHTR-------------NFDIASIADIL 460

Query: 178 EL---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
                   A      L   L   F  K+  +LEI   I      + VLD++  FDD A  
Sbjct: 461 GFSKNHPVAIESLEKLLHGLMNIFVSKEAFILEIKASITPDTQGIHVLDTRFGFDDAAHR 520

Query: 235 ---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLY 289
              R  DI  LR+ +EE   E++A++  + YI L  +G IG +VNGAGLAM T+D + L+
Sbjct: 521 SSGRQSDIHGLRNKAEEVPAEVDAEKDGIVYITLPGEGRIGTLVNGAGLAMNTVDALTLH 580

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG+ ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +CD++ +GI+ A +++
Sbjct: 581 GGSCANFLDTGGKATAETVKSSFRVILSDPRVKSIFVNIFGGLTKCDMIAEGIIMAFRDL 640

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +N+P+V+RL G N ++G ++IAESGL +      + AA+K++   K
Sbjct: 641 GMNVPVVVRLRGTNEELGQKMIAESGLPLHAFDSFEQAAKKVISLSK 687


>gi|163782675|ref|ZP_02177672.1| hypothetical protein HG1285_17365 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882248|gb|EDP75755.1| hypothetical protein HG1285_17365 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 433

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 114/430 (26%), Positives = 194/430 (45%), Gaps = 59/430 (13%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISS-VHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M+++EY+A   + +KY +P  K + +       E+ +  L     VVKSQ+  G RGK  
Sbjct: 1   MDLYEYEAYDKIFKKYGIPTLKYMFVDHITEEVENFVNQLG--ECVVKSQVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V++ SS +  +  I+ +L   +        G     V V + A+I++E+
Sbjct: 58  ---------GAVKLCSSPEEALETIKTLLEYPVY-------GEMPVGVLVAEKANIVKEI 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+     +       S +GG+DIEEV +    KI    IDPL G+    V +    L 
Sbjct: 102 YASITYSTETRTPVLTLSFEGGVDIEEVPE---DKIGIFPIDPLKGLYPHMVRNYLLELG 158

Query: 179 LQGQ---ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGR--LRVLDSKISFDDNA 232
           +  +   A  +  ++  N+Y AF + +  LLEINPL I+  NG+  +R LD+ +  DD+A
Sbjct: 159 MPQEYLSAMRELSEVVANMYNAFWNAEARLLEINPLAIVDVNGKLRVRALDAVVKIDDDA 218

Query: 233 LYRHLDIQELRDVSEEDS--REIEAKQHN--------LSYIALDGNIGCMVNGAGLAMAT 282
                 I  +R         REI A + +         SY+ +DG+I  M  G G +  T
Sbjct: 219 SIPPAKIYGVRTAMRRPPTEREIAAAEIDKDDHRGKAGSYVEVDGDIAMMTFGGGGSTVT 278

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---- 338
           ++     G  PANF D+GG    +K+    +II S   ++G+L+   GG      +    
Sbjct: 279 IETTYAIGMKPANFTDIGGNPPAEKMYKITRIILSKPGIRGVLV--CGGTANNTRIDVTL 336

Query: 339 VKGILSAVKEVK------INIPLVMRLEGANVDIGNRLI----AESGLNVITAID---LD 385
            +G+ +A++++K       N   V+R  G   + G +++     E G+          L 
Sbjct: 337 GEGVANAIRDLKKEGKLDPNWIWVVRRNGPEAEKGLKMLYEAFKECGVKGEIYDSTLPLT 396

Query: 386 DAAQKIVHAV 395
           +A  ++   +
Sbjct: 397 EAPVRLKELL 406


>gi|209524798|ref|ZP_03273344.1| Succinate--CoA ligase (ADP-forming) [Arthrospira maxima CS-328]
 gi|209494677|gb|EDZ94986.1| Succinate--CoA ligase (ADP-forming) [Arthrospira maxima CS-328]
          Length = 381

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 184/411 (44%), Gaps = 45/411 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L R+  +PV     I   H  +    T+P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYQAKTLFRQMAIPVLPSQRIDFAHDLKG--LTIPYPV-VLKSQVRAGGRGKAGGI 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +   ++   V              + + +  I  +          +  E   D  +E+YL
Sbjct: 58  KFVENTIDAV-----------AAAQCIFNLAIQDEYP------QVLLAEAKYDADQEVYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D  +     + S QGG+++E         I K+++D     +      L   + LQ
Sbjct: 101 AVILDPVTRRPLLLGSVQGGVNVEATMFH----IQKVVVD--QEFSPFYARRLTVKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +   ++   +Y+ F +KD+ L+EINPL I   G L  LD K+  ++ AL RH D+ 
Sbjct: 155 EHHVLSVSNILEKMYRLFVEKDLDLVEINPLGISSTGELMALDGKVVANNQALERHPDLV 214

Query: 241 ELR-----DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            L      D S  +  ++   Q N  ++ LDGNIG + NGA L M T+D I    G PAN
Sbjct: 215 LLVNEQCSDTSAIEPTDLPTNQPN--FVELDGNIGIICNGAALTMTTLDQIIATKGKPAN 272

Query: 296 FLDVGGGADQD-------KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
           F ++GG    D              ++ +   +K ++IN  G     D L + I + ++ 
Sbjct: 273 FFNLGGEDHFDLTETLLQNFYEGLTLVMASDRIKVVMINWLGHQTTTDQLAEAIANFLQR 332

Query: 349 VK--INIP-LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
                 +P  V+RL+    +  + L   + L V    + DDA ++ V   +
Sbjct: 333 QNQSNTLPHFVLRLQVTEPE--SNLAKFADLPVEIVANFDDAVKRTVALSR 381


>gi|284052711|ref|ZP_06382921.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Arthrospira
           platensis str. Paraca]
 gi|291567703|dbj|BAI89975.1| succinyl-CoA synthetase beta chain [Arthrospira platensis NIES-39]
          Length = 381

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 186/411 (45%), Gaps = 45/411 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L R+  +PV     I   H  +    T+P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYQAKTLFRQMAIPVLPSQRIDFAHDLKG--LTIPYPV-VLKSQVRAGGRGKAGGI 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +   ++   V              + + +  I  +          +  E   D  +E+YL
Sbjct: 58  KFVENTIDAV-----------AAAQCIFNLAIQDEYP------QVLLAEAKYDADQEVYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D  +     + S QGG+++E         I K+++D     +      L   + LQ
Sbjct: 101 AVILDPVTRRPLLLGSVQGGVNVEATMFH----IQKVVVD--QEFSPFYARRLMVKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +   ++   +Y+ F +KD+ L+EINPL I   G L  LD K+  ++ AL RH D+ 
Sbjct: 155 EHLILSVSNILEKMYRLFVEKDLDLVEINPLGISSTGELMALDGKVVANNQALERHPDLV 214

Query: 241 ELR-----DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            L      D +  +  ++   Q N  ++ LDGNIG + NGA L M T+D I    G PAN
Sbjct: 215 MLVHEQCSDPAAIEPTDLPTNQPN--FVKLDGNIGIICNGAALTMTTLDQIIATKGKPAN 272

Query: 296 FLDVGGGADQDKVAA-------AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
           FL++GG    +               + +   +K ++IN  G     D + + I + ++ 
Sbjct: 273 FLNLGGEDHFEVTETLLQNLSDGLTSVMASDRIKVVMINWLGHQTTADQIAEAIANFLQH 332

Query: 349 VKI--NIP-LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            K    +P  V+RL    ++  + L   +GL V     LD+A ++ V   +
Sbjct: 333 QKTIETLPHFVLRLTVTELE--STLAKFAGLPVEIVATLDEAVKRTVALSR 381


>gi|146322592|ref|XP_752448.2| succinyl-CoA synthetase subunit alpha [Aspergillus fumigatus Af293]
 gi|129557744|gb|EAL90410.2| succinyl-CoA synthetase subunit alpha, putative [Aspergillus
           fumigatus Af293]
 gi|159131203|gb|EDP56316.1| succinyl-CoA synthetase, alpha subunit, putative [Aspergillus
           fumigatus A1163]
          Length = 678

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 102/295 (34%), Positives = 167/295 (56%), Gaps = 12/295 (4%)

Query: 108 VEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           V +      ++ L++ VDRT+     +AST+  +      + +P              TS
Sbjct: 390 VNEATPSDSDVLLTMTVDRTALSPCIVASTRPDLAQASSDR-FPFAYTTQEFS----STS 444

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
             + S+   L+L   A     +L   L+  F +K+  LLE+   + + +G ++V  ++  
Sbjct: 445 PVLKSVASHLQLPETACGKLAELMQALWGIFKEKEAYLLEVR--VNLSHGEMQVRGARFG 502

Query: 228 FDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMAT 282
           FDD A     R  D+  LRD  +E   E+EA++  + Y+ L G   IG +VNGAGLAM T
Sbjct: 503 FDDAAFRSSGRQEDLHRLRDKEKEVPEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNT 562

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           +D + ++GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+ RCD++ +GI
Sbjct: 563 VDALSIHGGHCANFLDTGGKATSETVKSSFRIIRSDPRVKAIFVNIFGGLTRCDMIAEGI 622

Query: 343 LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           + A +++++N+P+V+RL G N +IG ++IAESGL +      +DAA+K++   + 
Sbjct: 623 IMAFRDLEMNVPVVVRLRGTNEEIGQKMIAESGLPLHAFDSFEDAAKKVISLARS 677


>gi|134076926|emb|CAK45335.1| unnamed protein product [Aspergillus niger]
          Length = 325

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 105/298 (35%), Positives = 172/298 (57%), Gaps = 13/298 (4%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             + V++ A    + +LSL VDRT+     +AST  G +  +  + +P            
Sbjct: 34  ESIPVKEAALSESDFFLSLTVDRTALSPCILASTSAGFEPAQTGR-FPFAYE----GTDF 88

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G T+  V ++   L+L   A  +   L   L++ F +K+  LLE+            V D
Sbjct: 89  GSTTLLVETVASYLQLPATAHDNLAQLLQGLWRVFKEKEAYLLEVRANATSA---FEVRD 145

Query: 224 SKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGL 278
           ++ +FDD A     R  D+Q+LR+ +EE   E+EA++  + Y+ L+G  +IG +VNGAGL
Sbjct: 146 ARFAFDDAAFRSSGRQEDVQQLRNPAEEVPEEVEAEKDGIVYVKLEGKGSIGTLVNGAGL 205

Query: 279 AMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL 338
           AM T+D + ++GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++
Sbjct: 206 AMNTVDALTIHGGHCANFLDTGGKATAETVKSSFRIITSDRRVKAIFVNIFGGLTRCDMI 265

Query: 339 VKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +GI+ A +E+++ +P+V+RL G N + G ++IAESGL +      + AA++++   +
Sbjct: 266 AEGIILAFQEMEMTVPVVVRLRGTNEERGQQMIAESGLPLEAFDSFEAAAKRVIELAE 323


>gi|240276118|gb|EER39630.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H143]
          Length = 645

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 96/301 (31%), Positives = 158/301 (52%), Gaps = 20/301 (6%)

Query: 109 EDGADI-----LRELYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPL 162
           E G  I       + +  + +DR S     IAS T         ++ +P    K      
Sbjct: 352 EKGVAIGESNERSDFFFGISIDRNSRSPCIIASPTTNPATFLSRSRKFPFTYGKTH---- 407

Query: 163 IGVTSEDV--ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
              T+      ++   L L   +          L   F +K+  LLE   +    +G  R
Sbjct: 408 --FTANQANNRAVASYLGLGEISLEPLAKFAQTLLDIFINKEALLLETK-VSGRSDGSFR 464

Query: 221 VLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNG 275
           V +++  FDD A     R  DI +LR++++E   E+EA++  + Y+ L  +G+IG +VNG
Sbjct: 465 VTEARFGFDDAAYKGSKRQEDIHKLRNMAQEVPEEVEAEKEGIVYVKLPGEGSIGTLVNG 524

Query: 276 AGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
           AGLAM T+D + L+GG  ANFLD GG A  + V ++F+I+ SD  VK I +NIFGG+  C
Sbjct: 525 AGLAMNTVDALTLHGGHCANFLDTGGKATSETVKSSFRIVLSDPRVKTIFVNIFGGLTLC 584

Query: 336 DVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           D++  GI+ A +++ + +P+V+RL G N ++G ++IA+SGL +      ++AA K++   
Sbjct: 585 DMIANGIIMAFRDLDMKVPVVVRLRGTNEELGQKMIADSGLPLHAFDSFEEAASKVISLS 644

Query: 396 K 396
           +
Sbjct: 645 R 645


>gi|15606514|ref|NP_213894.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
 gi|2983723|gb|AAC07285.1| succinyl-CoA ligase beta subunit [Aquifex aeolicus VF5]
          Length = 436

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 181/430 (42%), Gaps = 59/430 (13%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISS-VHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M+++EY+A   + +KY +P  K + +          +  L     VVKSQ+  G RGK  
Sbjct: 1   MDLYEYEAYDKIFKKYGIPTPKYMFVEHITDDVVEFVNQLG--ECVVKSQVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G VRV S+    + +I  +L  T+        G     V V + A+IL+EL
Sbjct: 58  ---------GAVRVCSNPDEALEEIETLLRMTVY-------GEMPVGVLVVEKANILKEL 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S++            S +GGMDIEEV    P K+    I+PL G+    V +    L 
Sbjct: 102 YASIVYSTDHRAPVLTLSLEGGMDIEEVP---PDKVKSWPINPLKGLYPHMVRNYLLELG 158

Query: 179 LQG---QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNA 232
                        ++   ++ AF   +  LLEINPL I+  G    +  LD+ +  DD+A
Sbjct: 159 FPHEYMPVLRKLSEVIARMWDAFWGAEARLLEINPLAIVDRGGKPDVLALDAVVKIDDDA 218

Query: 233 LYRHLDIQELRD-----VSEEDSREIEAKQHN-----LSYIALDGNIGCMVNGAGLAMAT 282
                 I  +R       +E +    E  + +      SY+ LDG+I  M  G G +  T
Sbjct: 219 SIPPAKIYGVRTALRRPPTEREIAAAEIDKDDHRGKAGSYVELDGDIAMMTFGGGGSTVT 278

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---- 338
           ++     G  PAN  D+GG    +K+    +II S   ++ +L  I GG      +    
Sbjct: 279 IETCYELGLKPANLTDIGGNPPAEKMYKITRIILSKPGIRAVL--IAGGTANNTRIDVTL 336

Query: 339 VKGILSAVKEVK------INIPLVMRLEGANVDIGNRLI----AESGLNVITAID---LD 385
            +G+ +A++++K       N   V+R  G   + G R++     E G+          L 
Sbjct: 337 GEGVANALRDLKKEGKLDPNWIFVVRRNGPEAEKGLRMLYEAFKECGIKGEIYDSALPLT 396

Query: 386 DAAQKIVHAV 395
           +A  ++   +
Sbjct: 397 EAPVRLKELL 406


>gi|119510291|ref|ZP_01629427.1| succinyl-CoA synthetase beta chain [Nodularia spumigena CCY9414]
 gi|119465035|gb|EAW45936.1| succinyl-CoA synthetase beta chain [Nodularia spumigena CCY9414]
          Length = 408

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 96/429 (22%), Positives = 174/429 (40%), Gaps = 57/429 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I      +     +  P+ V+KSQ++ G R K    
Sbjct: 1   MDLLEYQVKEWFGKIGIPVLPSQRIDHPTDLKR--LKIRYPI-VLKSQVYTGERAKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR   +    I+  + I    +        G     +  E      +E YL
Sbjct: 55  -------GGVRFVETTIDAIAAAQTIFNLPI-------WGELPEVLLAESKYIGEQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + ST+  +D E   +     + +    P           L   + L+
Sbjct: 101 AVVLDTAVCRPVLLGSTEPDIDWESAGEKMHHVVVEQEFSPFY------ARRLALKMGLK 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F  KD+ L+EINPL +  +G++  L+ K+S ++ A+ RH D+ 
Sbjct: 155 GTLMQSVSSVVEKMYQLFVQKDLDLVEINPLAVSASGQVMALNGKVSINERAIGRHRDLA 214

Query: 241 EL--RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL- 297
           E+  +  + +    +     +   + L G IG + NG G  MAT+D++   GG   + L 
Sbjct: 215 EIAVKIANRQSRSSVNGHLGDWDGLELHGKIGILGNGTGSIMATLDLVTSAGGKAGSCLN 274

Query: 298 -------DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
                  DV       ++A    I+ +D S++ IL+N+ G + + + + + I + V+  K
Sbjct: 275 LRHALVTDVSPTTFCSRLAKGLNILAADKSIQVILLNLLGSVPQTEEVAQIISNFVQHDK 334

Query: 351 INI------------------PLVMRLEGANVDIGNRLIAESGLN---VITAIDLDDAAQ 389
             I                  PLV+R+ G+  D+    +A        +    +LD+A  
Sbjct: 335 SEIKSPTVRPSSKTRRESHFPPLVVRITGSEFDVAKDFLATLNTQADALTVVENLDEAVA 394

Query: 390 KIVHAVKGV 398
             V   K +
Sbjct: 395 AAVRLAKPI 403


>gi|317030887|ref|XP_001392414.2| CoA-ligase [Aspergillus niger CBS 513.88]
          Length = 680

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 105/298 (35%), Positives = 172/298 (57%), Gaps = 13/298 (4%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             + V++ A    + +LSL VDRT+     +AST  G +  +  + +P            
Sbjct: 389 ESIPVKEAALSESDFFLSLTVDRTALSPCILASTSAGFEPAQTGR-FPFAYE----GTDF 443

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
           G T+  V ++   L+L   A  +   L   L++ F +K+  LLE+            V D
Sbjct: 444 GSTTLLVETVASYLQLPATAHDNLAQLLQGLWRVFKEKEAYLLEVRANATSA---FEVRD 500

Query: 224 SKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGL 278
           ++ +FDD A     R  D+Q+LR+ +EE   E+EA++  + Y+ L+G  +IG +VNGAGL
Sbjct: 501 ARFAFDDAAFRSSGRQEDVQQLRNPAEEVPEEVEAEKDGIVYVKLEGKGSIGTLVNGAGL 560

Query: 279 AMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL 338
           AM T+D + ++GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++
Sbjct: 561 AMNTVDALTIHGGHCANFLDTGGKATAETVKSSFRIITSDRRVKAIFVNIFGGLTRCDMI 620

Query: 339 VKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +GI+ A +E+++ +P+V+RL G N + G ++IAESGL +      + AA++++   +
Sbjct: 621 AEGIILAFQEMEMTVPVVVRLRGTNEERGQQMIAESGLPLEAFDSFEAAAKRVIELAE 678


>gi|169781606|ref|XP_001825266.1| CoA-ligase [Aspergillus oryzae RIB40]
 gi|83774008|dbj|BAE64133.1| unnamed protein product [Aspergillus oryzae]
          Length = 688

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             + + +      +++L+L VDRT+     IAST         +K +P   F        
Sbjct: 392 KSIPINETEPSESDIFLNLTVDRTALSPCVIASTSADFAPSHTSK-FPFPYFNTDFSSS- 449

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
              S  + S+   L L         +L   L++ F +K+  LLE+      +   L V  
Sbjct: 450 --DSPIIKSIASHLHLPETTHETLAELVQALWQIFKEKEAYLLEVRVNPSTEG--LEVRG 505

Query: 224 SKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGL 278
           ++  FDD A     R  ++  LR+ +EE   E+EA++  + Y+ L G   IG +VNGAGL
Sbjct: 506 ARFGFDDAAFRSSGRQKEVHSLRNPAEEVHEEVEAEKDGIVYVKLQGEGSIGTLVNGAGL 565

Query: 279 AMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL 338
           AM T+D + ++GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++
Sbjct: 566 AMNTVDALTIHGGHCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMI 625

Query: 339 VKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
            +GI+ A +++ +++P+V+RL G N + G ++IAESGL +      + AA+K++    G
Sbjct: 626 AEGIIMAFRDLDMSVPVVVRLRGTNEEEGQKMIAESGLPLHAFDSFEGAAKKVISLAGG 684


>gi|288819034|ref|YP_003433382.1| citryl-CoA synthetase large subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|46849514|dbj|BAD17844.1| citryl-CoA synthetase large subunit [Hydrogenobacter thermophilus]
 gi|288788434|dbj|BAI70181.1| citryl-CoA synthetase large subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308752617|gb|ADO46100.1| Succinate--CoA ligase (ADP-forming) [Hydrogenobacter thermophilus
           TK-6]
          Length = 429

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 114/402 (28%), Positives = 181/402 (45%), Gaps = 52/402 (12%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHA-AESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           MN++EY+A   + +KY +P  + +  SSV       +  L     VVKSQ+  G RGK  
Sbjct: 1   MNLYEYEAYDKIFKKYGIPTPEYMFESSVSDRLVEFVNQLG--ECVVKSQVLVGKRGKA- 57

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                    G V+V S  +S I   + +L   +        G     V V    +IL+EL
Sbjct: 58  ---------GAVKVCSDPQSAIETAQALLNYPVY-------GEMPVGVLVARKVNILKEL 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y S+             S +GGMDIEEV    P+K+    I+PL G+    V +    L 
Sbjct: 102 YASITYSTEVRAPVLTLSLEGGMDIEEVP---PEKVRSWTINPLKGLYPHMVRNYLLELG 158

Query: 179 LQ---GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGR--LRVLDSKISFDDNA 232
                     +  ++  N+Y+AF + +  LLEINPL I   NG+  +  LD+ ++ DD+A
Sbjct: 159 FPQEYMGILRELSEVVSNMYRAFWEAEARLLEINPLAICDVNGKLKVYALDAVVTIDDDA 218

Query: 233 LYRHLDIQELRDVSEEDS--REIEAKQHN--------LSYIALDGNIGCMVNGAGLAMAT 282
                 I  +R   +     REIEA   +         SY+ +DG+I  M  G G +  T
Sbjct: 219 SVPPSKIYGVRTAMKRPPTEREIEASLIDRDDHRGKAGSYVEVDGDIAMMTFGGGGSTVT 278

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---- 338
           ++     G  PANF D+GG    +K+    KII S   ++G+L+   GG      +    
Sbjct: 279 IETTYAIGLKPANFTDIGGNPPAEKMYKITKIILSKPGIRGVLV--CGGTANNTRIDVTL 336

Query: 339 VKGILSAVKE------VKINIPLVMRLEGANVDIGNRLIAES 374
            +G+ +A+++      +  +   V+R  G   + G R++ E+
Sbjct: 337 GEGVANAIRDLYKEGKLNPDWIWVVRRNGPEAEKGLRMLYEA 378


>gi|225560012|gb|EEH08294.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus G186AR]
          Length = 648

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 19/302 (6%)

Query: 109 EDGADI-----LRELYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPL 162
           E G  I       + +  + +DR S     IAS T         ++ +P    K      
Sbjct: 352 EKGVAIGESNKRSDFFFGISIDRNSRSPCIIASPTTNPATFLSRSRKFPFTYGKTHFTAN 411

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
                 ++ ++   L L   +          L   F +K+  LLE   +    +G  RV 
Sbjct: 412 Q----ANIRAVASYLGLGEISLEPLAKFAQTLLDIFINKEALLLETK-VSRRSDGSFRVT 466

Query: 223 DSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVN 274
           +++  FDD A     R  DI +LR++++E   E+EA++  + Y+ +     +G+IG +VN
Sbjct: 467 EARFGFDDAAYKSSKRQEDIHKLRNMAQEVPEEVEAEKEGIVYVKIFRLPGEGSIGTLVN 526

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAM T+D + L+GG  ANFLD GG A  + V ++F+I+ SD  VK I +NIFGG+  
Sbjct: 527 GAGLAMNTVDALTLHGGHCANFLDTGGKATSETVKSSFQIVLSDPRVKTIFVNIFGGLTL 586

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           CD++  GI+ A +++ + +P+V+RL G N ++G ++IA+SGL +      ++AA K++  
Sbjct: 587 CDMIANGIIMAFRDLDMKVPVVVRLRGTNEELGQKMIADSGLPLHAFDSFEEAASKVISL 646

Query: 395 VK 396
            +
Sbjct: 647 SR 648


>gi|67518053|ref|XP_658797.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4]
 gi|40746630|gb|EAA65786.1| hypothetical protein AN1193.2 [Aspergillus nidulans FGSC A4]
          Length = 581

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 104/308 (33%), Positives = 166/308 (53%), Gaps = 16/308 (5%)

Query: 94  KQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
                 G +VN   V        ++++SL +DRT+   A I ST  G +    A+     
Sbjct: 284 DMLKKAGIQVNETSVS-----ASDVHISLTIDRTALSPALITSTSPGFEPSNSAR----- 333

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
           +    I      +   + +    L L   A      +   L++ F  ++  +LE+     
Sbjct: 334 LPFPYIKEKFEASDSIITTAATQLSLPTSAHGKLAGIVQALWQIFKQREAFVLEVRANY- 392

Query: 214 MKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--N 268
              G   V  ++  FDD A     R  +I  LRDV EE   E+EA++  + Y+ L+G  +
Sbjct: 393 SAEGGFEVRGARFGFDDAAFRSSGRQEEIHALRDVKEEVPEEVEAEKDGIVYVKLNGKGS 452

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           IG +VNGAGLAM T+D +  +GG+ ANFLD GG A  + V ++F+IITSD  VK I +NI
Sbjct: 453 IGTLVNGAGLAMNTVDALTHHGGSCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNI 512

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           FGG+ RCD++ +GI+ A +++++++P+V+RL G N + G ++IAESGL +      +DAA
Sbjct: 513 FGGLTRCDMIAEGIILAFRDMQMSVPVVVRLRGTNEESGQQMIAESGLPLHAFDSFEDAA 572

Query: 389 QKIVHAVK 396
           +K++   K
Sbjct: 573 KKVIALAK 580


>gi|325919054|ref|ZP_08181115.1| succinyl-CoA synthetase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550490|gb|EGD21283.1| succinyl-CoA synthetase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 222

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 10/232 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A  A  +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEAANSLGKGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      +N V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+LVDR +  + +IAS++GG++IE+VA + P+ I  L +D + GV           L L 
Sbjct: 111 SVLVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLT 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
            +       +  NLYK F +KD++L+EINPL I+ +G L  LD K   DDNA
Sbjct: 171 AKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNA 222


>gi|242768237|ref|XP_002341527.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218724723|gb|EED24140.1| succinyl-CoA synthetase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 678

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 98/287 (34%), Positives = 151/287 (52%), Gaps = 14/287 (4%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV--ASLC 174
           + +LS+ VDRTS       S+ G   ++   +     I     +P     +++   + + 
Sbjct: 395 DFHLSITVDRTSLSPCVAVSS-GNQSLKSSLR-----IPFNYTNPAFSRAADNTIQSEIV 448

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
             L    + +   G     LYK F D +  +LE        +  + V D++  FDD A  
Sbjct: 449 SFLGYSDECQETVGKYLQQLYKIFRDNEAFVLETRA-SFSPDKEVVVHDARFGFDDAAHK 507

Query: 235 ---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMDIIKLY 289
              RH  + +LRD++ E   E+ A+   + YI L+G   IG +VNGAGLAM T+D++ L 
Sbjct: 508 SSGRHEKLHQLRDIAAEVPEEVRAENSGIVYIKLEGEGSIGTLVNGAGLAMNTVDVLILK 567

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG PANFLD GG A    V   F I+  D+ V  I +NIFGG+ RCD++ +GI+ A +E+
Sbjct: 568 GGKPANFLDTGGKATAATVKECFSILCEDARVNTIFVNIFGGLTRCDMIAEGIMDAFREL 627

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            + +P+V+RL G N + G +LIAESGL +      D+AA K +   +
Sbjct: 628 DMKVPVVVRLRGTNEEKGQKLIAESGLPLHAFDSFDEAADKAIRFAR 674


>gi|325090016|gb|EGC43326.1| succinyl-CoA ligase alpha-chain [Ajellomyces capsulatus H88]
          Length = 648

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 95/304 (31%), Positives = 158/304 (51%), Gaps = 23/304 (7%)

Query: 109 EDGADI-----LRELYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLLIDPL 162
           E G  I       + +  + +DR S     IAS T         ++ +P    K      
Sbjct: 352 EKGVAIGESNERSDFFFGISIDRNSRSPCIIASPTTNPATFLSRSRKFPFTYGKTH---- 407

Query: 163 IGVTSEDV--ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
              T+      ++   L L   +          L   F +K+  LLE   +    +G  R
Sbjct: 408 --FTANQANNRAVASYLGLGEISLEPLAKFAQTLLDIFINKEALLLETK-VSGRSDGSFR 464

Query: 221 VLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
           V +++  FDD A     R  DI +LR++++E   E+EA++  + Y+ +     +G+IG +
Sbjct: 465 VTEARFGFDDAAYKGSKRQEDIHKLRNMAQEVPEEVEAEKEGIVYVKIFRLPGEGSIGTL 524

Query: 273 VNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI 332
           VNGAGLAM T+D + L+GG  ANFLD GG A  + V ++F+I+ SD  VK I +NIFGG+
Sbjct: 525 VNGAGLAMNTVDALTLHGGHCANFLDTGGKATSETVKSSFRIVLSDPRVKTIFVNIFGGL 584

Query: 333 MRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
             CD++  GI+ A +++ + +P+V+RL G N ++G ++IA+SGL +      ++AA K++
Sbjct: 585 TLCDMIANGIIMAFRDLDMKVPVVVRLRGTNEELGQKMIADSGLPLHAFDSFEEAASKVI 644

Query: 393 HAVK 396
              +
Sbjct: 645 SLSR 648


>gi|212542507|ref|XP_002151408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
 gi|210066315|gb|EEA20408.1| succinyl-CoA synthetase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
          Length = 676

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/286 (34%), Positives = 150/286 (52%), Gaps = 10/286 (3%)

Query: 116 RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            + +LS+ VDRTS       S+        +   +     +   +    V SE    +  
Sbjct: 395 EDFHLSITVDRTSRSPCITVSSGSKSTESSLRILFNYTNPEFSTNTTSAVQSE----IVS 450

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
            L  +   +   G     LYK F   +  +LE           + V +++  FDD A   
Sbjct: 451 FLGYETDHQETLGKYLQGLYKIFKTNEAFVLETRA-SFSSEKNIVVHEARFGFDDAAYKS 509

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYG 290
             RH  + +LRDV+ E   E+ A++  + Y+ L  DG+IG +VNGAGLAM T+D + L G
Sbjct: 510 SGRHEKLHQLRDVAAEVPEEVRAEKSGIVYVKLNGDGSIGTLVNGAGLAMNTVDALILKG 569

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G PANFLD GG A    V   F I+  D+ VK I +NIFGG++RCD++ +GI+ A KE+ 
Sbjct: 570 GKPANFLDTGGKATTATVKECFSILCEDARVKTIFVNIFGGLIRCDMIAEGIMEAFKELD 629

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + IP+V+RL G N + G +LIAESGL +      ++AA+K++   K
Sbjct: 630 MKIPVVVRLRGTNEEKGQKLIAESGLPLHAFDSFEEAAEKVISLTK 675


>gi|259488488|tpe|CBF87961.1| TPA: succinyl-CoA synthetase subunit alpha, putative
           (AFU_orthologue; AFUA_1G10830) [Aspergillus nidulans
           FGSC A4]
          Length = 703

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/308 (33%), Positives = 166/308 (53%), Gaps = 16/308 (5%)

Query: 94  KQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
                 G +VN   V        ++++SL +DRT+   A I ST  G +    A+     
Sbjct: 406 DMLKKAGIQVNETSVS-----ASDVHISLTIDRTALSPALITSTSPGFEPSNSAR----- 455

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
           +    I      +   + +    L L   A      +   L++ F  ++  +LE+     
Sbjct: 456 LPFPYIKEKFEASDSIITTAATQLSLPTSAHGKLAGIVQALWQIFKQREAFVLEVRANY- 514

Query: 214 MKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--N 268
              G   V  ++  FDD A     R  +I  LRDV EE   E+EA++  + Y+ L+G  +
Sbjct: 515 SAEGGFEVRGARFGFDDAAFRSSGRQEEIHALRDVKEEVPEEVEAEKDGIVYVKLNGKGS 574

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           IG +VNGAGLAM T+D +  +GG+ ANFLD GG A  + V ++F+IITSD  VK I +NI
Sbjct: 575 IGTLVNGAGLAMNTVDALTHHGGSCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNI 634

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
           FGG+ RCD++ +GI+ A +++++++P+V+RL G N + G ++IAESGL +      +DAA
Sbjct: 635 FGGLTRCDMIAEGIILAFRDMQMSVPVVVRLRGTNEESGQQMIAESGLPLHAFDSFEDAA 694

Query: 389 QKIVHAVK 396
           +K++   K
Sbjct: 695 KKVIALAK 702


>gi|226291384|gb|EEH46812.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
           Pb18]
          Length = 664

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 16/302 (5%)

Query: 106 VYVEDGADILR-----ELYLSLLVDRTSGMVAFIASTQGGMDIE-EVAKDYPQKIFKLLI 159
           +  E G  I       + +  L +DR S     IAS       +   A+ +P    K   
Sbjct: 368 LLKEKGLAIDESNEPGDFFFGLSIDRKSHSPCIIASPTTDPATQLSQARVFPFTYGKTQF 427

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
                    +  ++   + L   A      L  NL   F  K+  +LE   + +  +G  
Sbjct: 428 S----ADGANTRAVASHIGLGEFALTPLAKLAQNLLDIFMSKEAFVLETK-ITVASDGSF 482

Query: 220 RVLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVN 274
           +V  ++  FDD A     R  DI  LR+ +EE   E+EA+++ + YI LDG   IG +VN
Sbjct: 483 QVSGARFGFDDAAYKSSKRQEDIHRLRNEAEEVPEEVEAEKYGIVYIKLDGEGSIGTLVN 542

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAM T+D +  +GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+  
Sbjct: 543 GAGLAMNTVDALSHHGGHCANFLDTGGKATSETVKSSFRIILSDPRVKTIFVNIFGGLTL 602

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           CD++  GI+ A +++ + +P+V+RL G N +IG ++IA+SGL +      ++AA+K++  
Sbjct: 603 CDMIANGIIMAFRDLDMKVPVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEEAAKKVISL 662

Query: 395 VK 396
            +
Sbjct: 663 TR 664


>gi|295667892|ref|XP_002794495.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis
           Pb01]
 gi|226285911|gb|EEH41477.1| succinyl-CoA ligase subunit alpha [Paracoccidioides brasiliensis
           Pb01]
          Length = 670

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 11/286 (3%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIE-EVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           + +  L +DR S     IAS       +   A+ +P    K            +  ++  
Sbjct: 390 DFFFGLSIDRKSHSPCIIASPTTDPATQLSQARVFPFTYGKTQFS----ADGANTRAVAS 445

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA--- 232
            + L   A      L  NL   F  K+  +LE   + +  +G  +V  ++  FDD A   
Sbjct: 446 HIGLGKFALEPLAKLAQNLLDIFMSKEAFVLETK-ITVASDGSFQVSGARFGFDDAAYKS 504

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMDIIKLYG 290
             R  DI  LR+ +EE   E+EA+++ + YI LDG   IG +VNGAGLAM T+D +  +G
Sbjct: 505 SKRQKDIHRLRNEAEEVPEEVEAEKYGIVYIKLDGEGSIGTLVNGAGLAMNTVDALSHHG 564

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+  CD++  GI+ A +++ 
Sbjct: 565 GHCANFLDTGGKATSETVKSSFRIILSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLD 624

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + +P+V+RL G N +IG ++IA+SGL +      ++AA+K++   +
Sbjct: 625 MKVPVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEEAAKKVISLTR 670


>gi|303246553|ref|ZP_07332832.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ]
 gi|302492263|gb|EFL52138.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ]
          Length = 703

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 119/390 (30%), Positives = 179/390 (45%), Gaps = 24/390 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ E+  K LL +  + V  G+         + +K      Y +K+Q  +GGRGK    
Sbjct: 1   MHLTEHAGKTLLAEAGIAVPPGLAFEPGD--VAGLKPPFAAPYYLKAQTLSGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY-VEDGADILRELY 119
                  GGV    S   +      +           P G  V     +E      R LY
Sbjct: 56  -------GGVVRLESAGELPGAAEALFSR--------PCGGVVPPFLRLEPAVAHDRALY 100

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           +SL V R    +    + QGG+D+E +A   P+ +  L + P    T   V        L
Sbjct: 101 ISLGVSRDLRSLCLTLARQGGVDVEGLA-GTPELL-VLPVAPPFVPTPRLVRRAFFHFGL 158

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             +       L   L+ A  D  + L EINPL +  +GR   LD+K+  DD+A      +
Sbjct: 159 ARECYAAFAGLIERLFAAVNDYGLLLAEINPLAVTPDGRFVALDAKVVIDDSASRIIPKL 218

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
               D       E  A+ H LS+++L G+IG + NGAGLAMATMD +   G A ANFLD 
Sbjct: 219 ARFGDDRLATPTERLARDHGLSFVSLSGHIGLVANGAGLAMATMDALDAAGLAAANFLDF 278

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GG AD  ++ AAF +I ++  V    +N+FGGI+ C  + K +L A+ +   + P+V+R 
Sbjct: 279 GGTADAARLRAAFDLIFAEPRVAACCVNMFGGILSCADVAKALLEALGDASPSRPIVVRF 338

Query: 360 EGANVDIGNRLIAESGLN-VITAIDLDDAA 388
            G   ++G  L+   GL  ++ A D+D A 
Sbjct: 339 AGNGAEMGAALLRRQGLPALLVADDMDQAV 368


>gi|15921204|ref|NP_376873.1| succinyl-CoA synthetase subunit beta [Sulfolobus tokodaii str. 7]
 gi|15621989|dbj|BAB65982.1| 272aa long hypothetical succinyl-CoA synthetase beta subunit
           [Sulfolobus tokodaii str. 7]
          Length = 272

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 110/278 (39%), Positives = 155/278 (55%), Gaps = 22/278 (7%)

Query: 103 VNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
           VN   VE+     +E+YLS L+DR       +AS +GG+DIE         +    I   
Sbjct: 5   VNKFLVEEFIPHEKEIYLSALIDRDVAEPIIVASPEGGIDIESSKN-----VKIFHIPIE 59

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
            GV S DV  +   L ++G        +   LYK   + D  L EINPL +  +GRL  L
Sbjct: 60  RGVRSYDVIKIEKYLNVKG-----LEPIIKGLYKLVTEYDAELAEINPLAVTVDGRLYAL 114

Query: 223 DSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMAT 282
           DSK+  +DNAL+RH D+ E          +I       +Y+ LDG+IG + NGAGL MAT
Sbjct: 115 DSKVILEDNALFRHQDLLE----------KIGRSPSKDAYVELDGDIGIIGNGAGLTMAT 164

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           MD++KL GG+PA+F DVGGGAD++KV  A   I S+  VK I+INI+GGI +CD +  GI
Sbjct: 165 MDMVKLMGGSPADFYDVGGGADREKVKEAVLKIGSNPKVKKIIINIYGGITKCDEVALGI 224

Query: 343 LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           + A     I  P+ +RL G N + G +++ ++G+   T
Sbjct: 225 VDAY--SLIKKPIYVRLVGTNEEQGRKILQDNGIKYYT 260


>gi|30268174|emb|CAB45708.2| hypothetical protein [Homo sapiens]
          Length = 211

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/195 (55%), Positives = 149/195 (76%)

Query: 204 SLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI
Sbjct: 1   TMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYI 60

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            LDGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD  V  
Sbjct: 61  GLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLA 120

Query: 324 ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
           IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+SGL ++   D
Sbjct: 121 ILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDD 180

Query: 384 LDDAAQKIVHAVKGV 398
           LD+AA+ +V   + V
Sbjct: 181 LDEAARMVVKLSEIV 195


>gi|225679646|gb|EEH17930.1| succinyl-CoA synthetase beta chain [Paracoccidioides brasiliensis
           Pb03]
          Length = 694

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 16/302 (5%)

Query: 106 VYVEDGADILR-----ELYLSLLVDRTSGMVAFIASTQGGMDIE-EVAKDYPQKIFKLLI 159
           +  E G  I       + +  L +DR S     IAS       +   A+ +P    K   
Sbjct: 398 LLKEKGLAIDESNEPGDFFFGLSIDRKSHSPCIIASPTTDPATQLSQARVFPFTYGKTQF 457

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
                    +  ++   + L   A      L  NL   F  K+  +LE   + +  +G  
Sbjct: 458 S----ADGANTRAVASHIGLGEFALTPLAKLAQNLLDIFMSKEAFVLETK-ITVASDGSF 512

Query: 220 RVLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVN 274
           +V  ++  FDD A     R  DI  LR+ +EE   E+EA+++ + YI LDG   IG +VN
Sbjct: 513 QVSGARFGFDDAAYKSSKRQEDIHRLRNEAEEVPEEVEAEKYGIVYIKLDGEGSIGTLVN 572

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAM T+D +  +GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+  
Sbjct: 573 GAGLAMNTVDALSHHGGHCANFLDTGGKATSETVKSSFRIILSDPRVKTIFVNIFGGLTL 632

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           CD++  GI+ A +++ + +P+V+RL G N +IG ++IA+SGL +      ++AA+K++  
Sbjct: 633 CDMIANGIIMAFRDLDMKVPVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEEAAKKVISL 692

Query: 395 VK 396
            +
Sbjct: 693 TR 694


>gi|255937433|ref|XP_002559743.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584363|emb|CAP92398.1| Pc13g13290 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 676

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 99/281 (35%), Positives = 158/281 (56%), Gaps = 15/281 (5%)

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQ 180
           + VDRT+     IAS+         ++  P +  K           S  +A++   L   
Sbjct: 403 ITVDRTALSPCIIASS--------TSQSNPARPLKFPFPYTQTEFGSSIIAAVASHLGHP 454

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHL 237
             A      L   L++ + +K+   LE   L I  NG L V  ++  FDD A     R  
Sbjct: 455 ASAHEQLTGLVQALWEIYKEKEAFTLETQ-LAISANGTLEVHGARFGFDDAAFRSSGRQE 513

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMDIIKLYGGAPAN 295
           DI +LRD +EE + E+EA++  + Y+ L+G   IG +VNGAGLAM T+D + ++GG  AN
Sbjct: 514 DIHKLRDTAEEVAEEVEAEKDGIVYVKLEGEGSIGTLVNGAGLAMNTVDALTIHGGHCAN 573

Query: 296 FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL 355
           FLD GG A  + V A+F++I SD+ VK + +NIFGG+ RCD++ +GI+ A +++ + +P+
Sbjct: 574 FLDTGGKATSETVKASFRVICSDTRVKAVFVNIFGGLTRCDMIAEGIILAFRDLNMKVPV 633

Query: 356 VMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           V+RL G N ++G ++IAESGL +      ++AA+K +   +
Sbjct: 634 VVRLRGTNEELGQKMIAESGLPLHAFDGFEEAAKKAIALAQ 674


>gi|119495818|ref|XP_001264686.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181]
 gi|119412848|gb|EAW22789.1| CoA-ligase, putative [Neosartorya fischeri NRRL 181]
          Length = 629

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 103/293 (35%), Positives = 169/293 (57%), Gaps = 12/293 (4%)

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
           + A    ++ L++ VDRT+     +AST+  +      + +P              TS  
Sbjct: 343 EAAPSDSDVLLTMTVDRTALSPCIVASTRPDLAQASSDR-FPFAYTTQEFS----STSPV 397

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           + ++   L+L   AR    +L   L++ F +K+  LLE+   +   +G ++V  ++  FD
Sbjct: 398 LEAVASHLQLPETARGKLAELTQALWEIFKEKEAYLLEVR--VNFSHGEMQVRGARFGFD 455

Query: 230 DNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMD 284
           D A     R  D+  LRD+ EE   E+EA++  + Y+ L G   IG +VNGAGLAM T+D
Sbjct: 456 DAAFRSSGRQEDVHRLRDIEEEVPEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVD 515

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
            + ++GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+ RCD++ +GI+ 
Sbjct: 516 ALSIHGGHCANFLDTGGKATSETVKSSFRIIRSDPRVKAIFVNIFGGLTRCDMIAEGIIM 575

Query: 345 AVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           A +++++N+P+V+RL G N +IG ++IAESGL +      +DAA+K++   + 
Sbjct: 576 AFRDLEMNVPVVVRLRGTNEEIGQKMIAESGLPLHAFDSFEDAAKKVISLARS 628


>gi|119493952|ref|ZP_01624513.1| succinyl-CoA synthetase beta chain [Lyngbya sp. PCC 8106]
 gi|119452309|gb|EAW33504.1| succinyl-CoA synthetase beta chain [Lyngbya sp. PCC 8106]
          Length = 392

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 54/421 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L R+ ++PV     I      +     +P P+ V+KSQ+ +GGRGK    
Sbjct: 1   MDLLEYQAKTLFREKDIPVLPSQRIDRAPDVKG--LRIPYPV-VLKSQVRSGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    ++  + I    L  +   P       +  E   +  +E YL
Sbjct: 55  -------GGIRFVENTIDAVAAAQAIFN--LPIRDEYPK-----VLLAEAKYNADQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ +D +S     + ST+GG+ +EE   +  Q +    +D     +S     L   + L 
Sbjct: 101 AVTLDSSSRRPVMLGSTKGGVAVEEAISEVQQVV----VD--QEFSSFYARRLSVKMGLH 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
               +    +   +Y  F +KD+ L+EINPL I  +G +  LD K+  +DNAL RH D+ 
Sbjct: 155 QDLILAVSAIIEKMYCLFVEKDLDLIEINPLGINPSGEVMALDGKVIVNDNALGRHRDLA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSY--------------IALDGNIGCMVNGAGLAMATMDII 286
            L    +  ++      ++  +              + L+GNIG + NGA + + T+D+I
Sbjct: 215 ALIQNHQNPAKASLTDVYSFPFPAQFDRVQLRELKMVELEGNIGILSNGADMTLTTVDLI 274

Query: 287 KLYGGAPANFLDVG-------GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
               G PAN+LD+          A  D +    ++++    VK +++N+   ++     +
Sbjct: 275 IQAKGKPANYLDLEVEDYSELTEAWCDHLYQGLELVSQSKQVKVVIVNLLSHVVSSQKTI 334

Query: 340 KGILSAVKE---VKINIPLVMRLEGANVDIGNRLIAE-SGLNVITAIDLDDAAQKIVHAV 395
             I S +++   +      V+RL          ++ + + L V  A  LD+A +  V   
Sbjct: 335 LEIASYLQKKASMGYLPQFVLRLAVNPP---REILDQLAQLPVQVAESLDEAVKLAVSLA 391

Query: 396 K 396
           K
Sbjct: 392 K 392


>gi|302658494|ref|XP_003020950.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton
           verrucosum HKI 0517]
 gi|291184822|gb|EFE40332.1| succinyl-CoA synthetase beta subunit, putative [Trichophyton
           verrucosum HKI 0517]
          Length = 698

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 112/399 (28%), Positives = 182/399 (45%), Gaps = 37/399 (9%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQI----------HAGGRGKGRFKELPAD 65
            +    G V+    A     +    P    K Q           H    G+G    L   
Sbjct: 319 GIEAPPGRVMGHADAGAWTAE--GEPDARTKIQALQSAGVVMVDHPEKFGEGMKVLLAGA 376

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +    +    K   S  R +L   + +          +   VE          L++ +D
Sbjct: 377 GRRPKPIIRPSKPARSPQRRML--YIKSSDAFGLLKEQDISVVESKGPAN--FTLAIAID 432

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL---QGQ 182
           R +       S     +  +   +Y  +             + D+AS+ D L        
Sbjct: 433 RKTCGPCITVSNSTDGNTHKFPFNYHAR-------------NFDIASVKDTLGFTKYPSM 479

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDI 239
           A      L   L   F  K+  LLE+   I      ++++D++  FDD A     R  DI
Sbjct: 480 ATESLEKLLHGLMNIFVTKEAFLLEVKAGIAPDTNNIQIIDARFGFDDAAYRSSGRQGDI 539

Query: 240 QELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
             LR+ ++E   E+EA++  + YI L  +G IG +VNGAGLAM T+D + L+GG+ ANFL
Sbjct: 540 HVLRNKADEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAMNTVDALTLHGGSCANFL 599

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVM 357
           D GG A  + V ++F++I SD  VKGI +NIFGG+ +CD++ +GI+ A +++ + +P+V+
Sbjct: 600 DTGGKATAETVKSSFRVILSDPRVKGIFVNIFGGLTKCDMIAEGIMMAFRDLGMKVPVVV 659

Query: 358 RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           RL G N ++G ++IAESGL +      + AA+K++   K
Sbjct: 660 RLRGTNEELGQKMIAESGLPLHAFDSFEQAAKKVISLSK 698


>gi|310796925|gb|EFQ32386.1| CoA-ligase [Glomerella graminicola M1.001]
          Length = 278

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 106/261 (40%), Positives = 155/261 (59%), Gaps = 11/261 (4%)

Query: 148 KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLE 207
           + YP++     +    G+T E V S+   L+   + R     +   LYK F  KD +LLE
Sbjct: 3   QQYPEQFRTFTLGYTRGITREIVESISKFLDASAKERDSLQRILGRLYKVFTAKDATLLE 62

Query: 208 INPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG 267
           I  L    +G L  LD ++ FDD A  R +D+  LRDV  E S E+EA+++ L Y+ +DG
Sbjct: 63  IGSLARSHDGTLTCLDVRVVFDDAASKRQVDVFSLRDVMHEISEEVEAEKYGLVYVKMDG 122

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILIN 327
           NIG +VNGAGLAMAT D I LYGG+ ANFLD GG A +  +  AF+II  D  VK IL+N
Sbjct: 123 NIGNVVNGAGLAMATNDAIALYGGSSANFLDAGGQATKHTMVKAFEIILRDERVKTILVN 182

Query: 328 IFGG----------IMRCDVLVKGILSAVKEVK-INIPLVMRLEGANVDIGNRLIAESGL 376
           I+GG          I+RCD++ + I+ A K++  + +P+V+RL+G N ++G +++ E+ L
Sbjct: 183 IYGGKSDRAWCNRWIIRCDMIAESIVGAAKQLGPLKVPMVVRLQGTNSELGLKILEEADL 242

Query: 377 NVITAIDLDDAAQKIVHAVKG 397
            + T  D   AA+K V   +G
Sbjct: 243 GLHTEADFGKAAEKAVELARG 263


>gi|56783615|dbj|BAD81060.1| putative succinyl-CoA synthetase beta subunit [Acidithiobacillus
           thiooxidans]
          Length = 222

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 10/232 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK LL +  +PV + +   SV  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKRLLAEEGIPVPRAIPAFSVREAVNQARELGGPAWVVKAQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVRV  S+  V    +E+LG  L+T QTG     V  + +E+ + I RELYL
Sbjct: 58  -------GGVRVVHSIAGVEKAAQELLGKPLVTAQTGVQAQHVAALLIEEPSSIARELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L+VDR    + F+A+ +GGMDIEE+A   P  + KL+++P  G        L     L 
Sbjct: 111 ALMVDRAQARITFLATREGGMDIEELAVTRPDALKKLVVNPSTGFLPFQARQLGFEFGLD 170

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                    +   +Y+     D  ++EINPL +  +GRL  LD+K+  DDNA
Sbjct: 171 TSQVQQLTRIMQGMYRLAQKLDALMVEINPLAVTSDGRLLALDAKLVMDDNA 222


>gi|75908004|ref|YP_322300.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Anabaena
           variabilis ATCC 29413]
 gi|75701729|gb|ABA21405.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Anabaena
           variabilis ATCC 29413]
          Length = 408

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 174/431 (40%), Gaps = 64/431 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    +  +PV     I      +     +  P+ V+KSQ+HAG R K    
Sbjct: 1   MDLLEYQVKEWFGEIGIPVLPSQRIDHPTDLKR--LKIRYPI-VLKSQVHAGEREK---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I+  + I   ++        G     +  E   +  +E YL
Sbjct: 54  ------VGGVRMVETTIDAIAAAQTIFNLSI-------WGELPEVLLAESKYNSHQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + ST+  +D+E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTAVCRPVLLGSTEADIDLELADQKMQYVVVEQEFSPFY------ARRLALKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F  KD+ L+EINPL +   G +  L+ K+  ++ A+ RH +I 
Sbjct: 155 GTLMQSVSTVLEKMYQLFVQKDLDLVEINPLGVNLAGEVMALNGKVGVNERAIGRHPEIA 214

Query: 241 ELRDVSEEDSREIE---AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            +   ++   R  +   +   + + +     IG + NG G  +AT D++   GG P   L
Sbjct: 215 AM--AAKIIPRHYDKSFSNGRDWNNLEKQRRIGILGNGTGSILATYDLVASGGGKPGICL 272

Query: 298 DVGGGA--------DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           ++   A          D++      + +D + + ILIN+ G I + +   + I   +++ 
Sbjct: 273 NLRHAAITDLSPTKFGDRLTKGLNTLAADKNTQVILINLLGSIPQPEEAAQAIAQFIQQN 332

Query: 350 KINIP------------------LVMRLEGANVDIGNRLIA-----ESGLNVITAIDLDD 386
           K   P                  LV+RL G+ ++    ++A     E GL  I   DLD+
Sbjct: 333 KGEYPPSIAKSNGKNLSQHQSPQLVIRLAGSELNAAKEVLAALQTHEEGL--ILVEDLDE 390

Query: 387 AAQKIVHAVKG 397
           A    V   K 
Sbjct: 391 AVATAVRLTKS 401


>gi|326474235|gb|EGD98244.1| succinyl-CoA synthetase subunit alpha [Trichophyton tonsurans CBS
           112818]
          Length = 620

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 92/285 (32%), Positives = 152/285 (53%), Gaps = 19/285 (6%)

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             L++ +DR +       S     +  +   +Y  +             + D+AS+ D L
Sbjct: 349 FTLAIAIDRKTCGPCITVSNSTDGNTRKFPFNYNAR-------------NFDIASVKDTL 395

Query: 178 EL-QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              +         L   +   F  K+  LLE+   I      + ++D++  FDD A    
Sbjct: 396 GFTKHHPSETLEKLLHGMMNVFVTKEAFLLEVKVGIAPDTNDIHIIDARFRFDDAAHRSS 455

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGG 291
            R  DI  LR+ ++E   E+EA++  + YI L  +G IG +VNGAGLAM T+D + L+GG
Sbjct: 456 GRQGDIHALRNKADEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAMNTVDALTLHGG 515

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           + ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +CD++ +GI+ A +++ +
Sbjct: 516 SCANFLDTGGKATAETVKSSFRVILSDPRVKSIFVNIFGGLTKCDMIAEGIMIAFRDLGM 575

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +P+V+RL G N  +G ++IAESGL +      + AA+K +   +
Sbjct: 576 KVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEQAAKKAISLSR 620


>gi|126335146|ref|XP_001367268.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 263

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 99/231 (42%), Positives = 147/231 (63%), Gaps = 3/231 (1%)

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
           E    L   +           D    LY+ F   D +++EINP++   +G +  +D+KI+
Sbjct: 20  EQAVRLAQKMGFPSNLVDSAADNMVKLYELFLKYDATMVEINPMLEDVDGGVLCMDAKIN 79

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           FD N+LY    I +L+  ++ED R+ +A +  ++YI L+G IGC+VNGA   +ATMDIIK
Sbjct: 80  FDSNSLYCQKKIFDLQGWTQEDERDNDAAKEGINYIGLNGKIGCLVNGA---VATMDIIK 136

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
           L+GG PANFLDVG GA  +++  +FK+ITSD  V+ IL+NIFG IMR  V+ +GI+ AVK
Sbjct: 137 LHGGMPANFLDVGDGASVNQMTHSFKLITSDKKVQAILVNIFGEIMRYGVIAQGIVMAVK 196

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           ++ I IP+V+ L+G  VD    LIA+ GL ++   DLD+AA+ +V   + V
Sbjct: 197 DLDIKIPIVVWLQGTRVDDAKALIADRGLKILAYNDLDEAAKMVVKLSEIV 247


>gi|149049948|gb|EDM02272.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit (predicted)
           [Rattus norvegicus]
          Length = 234

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 3/220 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 11  LSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTF- 69

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +   +   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 70  --TSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGAKGRICNQVLVCERKYPRREYYF 127

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++ ++R+      I S+QGG++IE+VA + P+ I K  +D + GV  E   +L   +   
Sbjct: 128 AITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVKEPVDIIEGVKKEQAVTLAKKMGFP 187

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
                   +    LY  F   D +++EINP++   +G++ 
Sbjct: 188 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVV 227


>gi|119501711|ref|XP_001267612.1| succinyl-CoA synthetase beta chain [Neosartorya fischeri NRRL 181]
 gi|119415778|gb|EAW25715.1| succinyl-CoA synthetase beta chain [Neosartorya fischeri NRRL 181]
          Length = 247

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 94/249 (37%), Positives = 137/249 (55%), Gaps = 4/249 (1%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  L T+QT P+G  V  +Y+    D+ +E YLSL  DR       + S QGG++IE 
Sbjct: 1   MLGHYLTTQQTPPSGLLVRKLYIYKAVDVEQEFYLSLTFDRERYSPVILISDQGGVNIES 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
                  K+ K   +   G+T+E +A +   L    +       +   + K F ++D  L
Sbjct: 61  ----NQDKLHKFWFNLSRGITAETMAGIQKQLCFTNKEMPTIESIIRQMIKLFEERDAIL 116

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           LE+NPL+    G    LD+K  FD+ A +R  +I    +       E EA++H L YI L
Sbjct: 117 LELNPLVRTPEGCFVCLDAKFDFDNAAQFRQPEIFSKEERMPGFEDEYEAQKHGLVYIRL 176

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
            G+IG +VNGAGLAMAT D+I L+GG  ANFLD+GG A  + +  AF+I++ D  V+GI 
Sbjct: 177 HGHIGNIVNGAGLAMATNDLINLHGGKCANFLDIGGKATTETLLKAFEILSRDQQVRGIF 236

Query: 326 INIFGGIMR 334
           +NIFG   +
Sbjct: 237 VNIFGAFPK 245


>gi|17231406|ref|NP_487954.1| succinyl-CoA synthetase beta chain [Nostoc sp. PCC 7120]
 gi|17133048|dbj|BAB75613.1| succinyl-CoA synthetase beta chain [Nostoc sp. PCC 7120]
          Length = 408

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/431 (22%), Positives = 174/431 (40%), Gaps = 64/431 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    +  +PV     I      +     +  P+ V+KSQ+HAG R K    
Sbjct: 1   MDLLEYQVKEWFGEIGIPVLPSQRIDHPTDLKR--LKIRYPI-VLKSQVHAGEREK---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I+  + I   ++        G     +  E   +  +E YL
Sbjct: 54  ------VGGVRMVETTIDAIAAAQTIFNLSI-------WGELPEVLLAESKYNSHQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + ST+  +D+E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTAVCRPVLLGSTEADIDLELADQKMQYVVVEQEFSPFY------ARRLALKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F  KD+ L+EINPL +   G +  L+ K+  ++ A+ RH +I 
Sbjct: 155 GTLMQSVSTVLEKMYQLFVQKDLDLVEINPLGVNLAGEVMALNGKVGVNERAIGRHPEIA 214

Query: 241 ELRDVSEEDSREIE---AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
            +   ++   R  +   +   + + +     I  + NG G  +AT D++   GG P   L
Sbjct: 215 AM--AAKIVPRHYDKSFSNGRDWNNLEKQRRISILGNGTGSILATYDLVASGGGKPGICL 272

Query: 298 DVGGGA--------DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           ++   A          D++      +++D + + ILIN+ G I + +   + I   +++ 
Sbjct: 273 NLRHAAITDLSPTKFGDRLTKGLNTLSADKNTQVILINLLGSIPQPEEAAQAIAQFIQQN 332

Query: 350 KINIP------------------LVMRLEGANVDIGNRLI-----AESGLNVITAIDLDD 386
           K   P                  LV+RL G+ +++   ++      E GL  I   DLD+
Sbjct: 333 KGEYPPSIAKSNGKNLSQHQSPQLVIRLAGSELNVAKEVLAALQTREEGL--ILVEDLDE 390

Query: 387 AAQKIVHAVKG 397
           A    V   K 
Sbjct: 391 AVATAVRLTKS 401


>gi|326479223|gb|EGE03233.1| succinyl-CoA synthetase subunit alpha [Trichophyton equinum CBS
           127.97]
          Length = 683

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 92/285 (32%), Positives = 151/285 (52%), Gaps = 19/285 (6%)

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             L++ +DR +       S     +  +    Y  +             + D+AS+ D L
Sbjct: 412 FTLAIAIDRKTCGPCITVSNSTDGNTRKFPFSYNAR-------------NFDIASVKDTL 458

Query: 178 EL-QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
              +         L   +   F  K+  LLE+   I      + ++D++  FDD A    
Sbjct: 459 GFTKHHPSETLEKLLHGMMNVFVTKEAFLLEVKVGIAPDTNDIHIIDARFGFDDAAHRSS 518

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGG 291
            R  DI  LR+ ++E   E+EA++  + YI L  +G IG +VNGAGLAM T+D + L+GG
Sbjct: 519 GRQGDIHALRNKADEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAMNTVDALTLHGG 578

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           + ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +CD++ +GI+ A +++ +
Sbjct: 579 SCANFLDTGGKATAETVKSSFRVILSDPRVKSIFVNIFGGLTKCDMIAEGIMMAFRDLGM 638

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +P+V+RL G N  +G ++IAESGL +      + AA+K +   +
Sbjct: 639 KVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEQAAKKAISLSR 683


>gi|148530002|gb|ABQ82207.1| succinyl-CoA synthetase beta subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 203

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 109/203 (53%), Positives = 146/203 (71%)

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
           AS  GGM IE+VA    ++I K  IDP  G++     +L   L+L G++      +    
Sbjct: 1   ASQDGGMAIEDVAAATAERILKEPIDPATGLSDYQARTLAARLDLHGRSIRAFTTVLRAA 60

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIE 254
           Y AF   D +++EINPL++ ++G L  LD+K+SFDDNAL+RH +++ELRD +EED RE E
Sbjct: 61  YDAFVALDAAIVEINPLVVTRSGDLLALDAKMSFDDNALFRHPELEELRDENEEDPRERE 120

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A +H L+Y+ LDG IGCMVNGAGLAMATMDIIK+ G  PANFLDVGGGA +++VAAAF+I
Sbjct: 121 AARHGLAYVGLDGTIGCMVNGAGLAMATMDIIKMEGEEPANFLDVGGGATRERVAAAFRI 180

Query: 315 ITSDSSVKGILINIFGGIMRCDV 337
           + +D  V+ IL+NIF GIMRCD+
Sbjct: 181 LLADRKVRRILVNIFRGIMRCDI 203


>gi|121701827|ref|XP_001269178.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1]
 gi|119397321|gb|EAW07752.1| CoA-ligase, putative [Aspergillus clavatus NRRL 1]
          Length = 679

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 99/291 (34%), Positives = 159/291 (54%), Gaps = 12/291 (4%)

Query: 110 DGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
           + +    +  LS+ VDRT+     IAS     D    A  +P         P +  T   
Sbjct: 393 ERSPSESDALLSVTVDRTALSPCIIASGNPTSDPASSA-TFPFAYST----PELSSTHSA 447

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           + ++   L L   AR     L   L++ + +K+  +LE+      ++  + V  +  +FD
Sbjct: 448 IEAVASHLNLPETARGGLAKLAQALWQIYKEKEAYVLEVRINFASED--IEVRGAHFAFD 505

Query: 230 DNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMD 284
           D A     R  D+  LR+  EE   E+EA++  + Y+ L G   IG +VNGAGLAM T+D
Sbjct: 506 DAAFRSSGRQEDVHRLRNKEEEVPEEVEAEKDGIVYVKLQGEGSIGTLVNGAGLAMNTVD 565

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILS 344
            + ++GG  ANFLD GG A  + V ++F+II SD  VK I +NIFGG+ RCD++  GI+ 
Sbjct: 566 ALSIHGGHCANFLDTGGKATSETVKSSFRIIRSDPRVKAIFVNIFGGLTRCDMIADGIIM 625

Query: 345 AVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           A +++++ +P+V+RL G N +IG ++IA+SGL +      +DAA+K++   
Sbjct: 626 AFRDLEMTVPVVVRLRGTNEEIGQKMIADSGLPLHAFDSFEDAAKKVISLA 676


>gi|298490424|ref|YP_003720601.1| ATP-grasp domain-containing protein ['Nostoc azollae' 0708]
 gi|298232342|gb|ADI63478.1| ATP-grasp domain protein ['Nostoc azollae' 0708]
          Length = 405

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 94/427 (22%), Positives = 169/427 (39%), Gaps = 59/427 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I      +     +  P+ V+KSQ+HA  R K    
Sbjct: 1   MDLLEYQVKEWFGKMGIPVLPSQRIDHPTDLKR--LKIRYPI-VLKSQVHADERAKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGVR+  +    I+  + I    +        G     +  E   D   E YL
Sbjct: 55  -------GGVRIVETTIDAIAAAQNIFNLPI-------WGELPEVLLAESKYDAKDEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        +   +  +D E   +     + +    P           L   + LQ
Sbjct: 101 AVVLDTALCRPVLLGCKESDIDWESPGEKMQYVVVEQEFSPFY------ARRLGLKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y+ F  KD+ L+EINPL +   G++  L+ KI  +  A+ RH +I 
Sbjct: 155 GALMQSVSDIVEKMYQLFVQKDLDLVEINPLAVSAAGQVMALNGKIRVNPRAINRHPEIA 214

Query: 241 ELRDVSEEDSREIEAKQHNL----SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA-- 294
           ++   ++  +R   ++ +N+    + + + G IG + NG G  + T+D +   GG P   
Sbjct: 215 QM--AAKIANRNKISRTNNILGDGNGLGVYGKIGILANGTGSLLTTLDAVFNAGGKPGLS 272

Query: 295 ------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV-- 346
                    D       D++A + + + SD S++ ILIN  G I     + K + + +  
Sbjct: 273 FNLRHSFLTDTTPNTFCDRLATSLRNLASDKSIQVILINFLGTIPDLSQMPKVVANFIQV 332

Query: 347 -------------KEVKINIP-LVMRLEGANVDIGNRLIAESGLN---VITAIDLDDAAQ 389
                        K    ++P +V RL G +     + +         +I   +L++A  
Sbjct: 333 DPQELKSPLSTTSKNKSRHLPRMVFRLAGTDFQDTKKHLTALNPESDTLIIVENLNEAVA 392

Query: 390 KIVHAVK 396
           + V   K
Sbjct: 393 QAVRLAK 399


>gi|150021735|ref|YP_001307089.1| succinate--CoA ligase (ADP-forming) [Thermosipho melanesiensis
           BI429]
 gi|149794256|gb|ABR31704.1| Succinate--CoA ligase (ADP-forming) [Thermosipho melanesiensis
           BI429]
          Length = 338

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 108/396 (27%), Positives = 183/396 (46%), Gaps = 59/396 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M I+E+  K L +++ V + +G +++S         T+     V+KSQ+  GGR K    
Sbjct: 1   MKIYEFVGKQLFKEHGVKIPEGYLVTSKDEL-----TIKFLPAVLKSQVLVGGRMKA--- 52

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+   ++ +        +L   +        G +   + +E   +I RE YL
Sbjct: 53  -------GGILFANNQREFYDYGNILLKKNI-------KGEKPYGILIEKMINIKREYYL 98

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+ +D+       + S  GG++IEE A     K+ K+  D                    
Sbjct: 99  SMYIDKLEKDFMILFSEYGGINIEENA----DKVIKINFD------------------KY 136

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   LYK   +KD++L+EINPL    NG L  LD+ +  DDN+++R    +
Sbjct: 137 KVLPKKFHKIILTLYKLMKEKDLTLIEINPLAETLNGDLIALDAVLHLDDNSIFRQKWAK 196

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +    ++              ++ L+G+IG +  GAG+ MATMD +  YGG PANFLD+G
Sbjct: 197 QFSSETQP-----------FHFVKLNGDIGIIGCGAGIVMATMDAVTFYGGKPANFLDLG 245

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGAD      A +    + S+  I++NIFGGI +CD + + I+   K+    I L +RL 
Sbjct: 246 GGADTKTTTLALEY-LKNLSINKIIMNIFGGITKCDEIAQAIVR-FKQKNPQISLYVRLT 303

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G N +I  +++ +  + + +  D+ +  +  V   K
Sbjct: 304 GTNEEIAKQILKKYNIELFS--DMYEMIECAVKEEK 337


>gi|300868661|ref|ZP_07113273.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oscillatoria
           sp. PCC 6506]
 gi|300333355|emb|CBN58465.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Oscillatoria
           sp. PCC 6506]
          Length = 419

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 111/447 (24%), Positives = 189/447 (42%), Gaps = 79/447 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL R+  +PV     I      +     +P P+ V+KSQ+          +
Sbjct: 1   MDLLEYQAKALFREMAIPVLPSQRIDYPTDLKG--LKIPYPV-VLKSQV----------R 47

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +    ++  + I    ++ +           +  E   D  +ELYL
Sbjct: 48  AGGRGRAGGIKFVENTIDAVAAAQTIFNLPIMDE-------YPEVLLAEAKYDADQELYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+D  +     + S QGG+++E       Q I      P           L   + LQ
Sbjct: 101 AVLLDPVARRPVLLGSKQGGINVEAAIAQMQQVIVDQDFSPFY------ARRLTLKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F +KD+ L+EINPL I ++G +  LD K++ +D AL RHLD+ 
Sbjct: 155 GGLIQSVSAIVEKMYQLFVEKDLDLVEINPLGISRSGEVMALDGKVTANDEALGRHLDLA 214

Query: 241 EL---------------------------------RDVSEEDSREIEA--------KQHN 259
            L                                 R  S      ++A            
Sbjct: 215 GLVGKKQFGSRGNIERGSGARASGEVSHSSVSGLRRYDSNVGRSPLDANSNPQQPISHSQ 274

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG-------GGADQDKVAAAF 312
           L+ + L+GNIG + NG GL MAT+D +    G PANFL++G           ++++    
Sbjct: 275 LNLVELEGNIGILCNGIGLTMATLDAVTHAKGKPANFLNLGSFERYELTDTLRERLERGL 334

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK---EVKINIPLVMRLEGANVDIGNR 369
           ++++ D SVK +L+NI G +   + +   I + ++       N  +V+RL G  +D    
Sbjct: 335 ELVSQDKSVKVVLVNILGSVAAGEEMTLAIATYLERKARANRNPQIVLRLVGDQLDTTKE 394

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAVK 396
            +  +GL++  A  LD+A  + V   K
Sbjct: 395 RL--AGLSLQLAEKLDEAVAQAVSLAK 419


>gi|289568924|ref|ZP_06449151.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T17]
 gi|289542678|gb|EFD46326.1| succinyl-CoA synthetase subunit beta sucC [Mycobacterium
           tuberculosis T17]
          Length = 277

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 18/265 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  K+NVP   G V  +   A++    +  P+ V K+Q+  GGRGK    
Sbjct: 1   MDLFEYQAKELFAKHNVPSTPGRVTDTAEGAKAIATEIGRPVMV-KAQVKIGGRGKA--- 56

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  ++ +      + ILG  +        G  V  + V + +DI  E YL
Sbjct: 57  -------GGVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYL 102

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S L+DR +     + S +GGM+IEEVA   P+++ K+ ++ + GV  +   S+ +   L 
Sbjct: 103 SFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLP 162

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +           L++ F  +D +L+E+NPL+   + ++  LD+KI+ D    +R     
Sbjct: 163 AEVLDTAPVTIAELWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDCFFDFRQPGHA 222

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL 265
           E  D +  D  E++AK+H+L+Y+ L
Sbjct: 223 EFEDRAATDPLELKAKEHDLNYVKL 247


>gi|70935244|ref|XP_738734.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56515189|emb|CAH87192.1| hypothetical protein PC302362.00.0 [Plasmodium chabaudi chabaudi]
          Length = 287

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 87/243 (35%), Positives = 135/243 (55%), Gaps = 6/243 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +   AE     L         V+K+QI +GGRG 
Sbjct: 46  LSIHEYLSIDLLRNNNIPCPQGYHAQTPEEAEEKALELQNACGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPEGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y++ L+DR S  +  + S+ GG  IE+++K  P+ I+K+ I+   G+T+      C+ 
Sbjct: 164 ERYVAFLLDRNSDNICLLGSSVGGSSIEDISKKTPEAIYKININIKDGLTNGQSREFCEQ 223

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +  +G       D+  NLYK F   D +LLEINPL    +GR+   D+K++FDDNA YR 
Sbjct: 224 IGFKGNELDIATDMLVNLYKIFKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEYRQ 283

Query: 237 LDI 239
            +I
Sbjct: 284 KEI 286


>gi|327293844|ref|XP_003231618.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS
           118892]
 gi|326466246|gb|EGD91699.1| succinyl-CoA synthetase subunit alpha [Trichophyton rubrum CBS
           118892]
          Length = 689

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/302 (31%), Positives = 154/302 (50%), Gaps = 20/302 (6%)

Query: 105 CVYVEDGADILRELY-----LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159
            +       I    Y     L++ +DR +           G D   +   +P        
Sbjct: 398 RLLEAQNISIAESKYPANFTLAIAIDRKTCGPCITVC--NGTDGNTL--KFPFNYHARNF 453

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
           D         V +    ++    A      L   L   F  K+  LLE+   I      +
Sbjct: 454 DIAS------VRNTLGFVKYHPMATGSLEKLLHGLMNVFVTKEAFLLEVKAGITPDTKDI 507

Query: 220 RVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVN 274
           ++L+++  FDD A     R  DI  LR+ ++E   E+EA+++ + YI L  +G IG +VN
Sbjct: 508 QILEARFGFDDAAYRSSGRQGDIHALRNKADEVPAEVEAEKNGIVYITLPGEGRIGTLVN 567

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAM T+D + L+GG+ ANFLD GG A  + V ++F++I SD  VK I +NIFGG+ +
Sbjct: 568 GAGLAMNTVDALTLHGGSCANFLDTGGKATAETVKSSFQVILSDPRVKSIFVNIFGGLTK 627

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           CD++ +G++ A +++ + +P+V+RL G N  +G ++IAESGL +      + AA+K++  
Sbjct: 628 CDMIAEGVMMAFRDLGMKVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEQAAKKVIGL 687

Query: 395 VK 396
            K
Sbjct: 688 SK 689


>gi|320031967|gb|EFW13924.1| succinyl-CoA synthetase, alpha subunit [Coccidioides posadasii str.
           Silveira]
          Length = 712

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 17/302 (5%)

Query: 106 VYVEDGADILRE------LYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLL 158
           V +++    +RE       +L   +DRT+   +FIAS T       E AK +P +  K  
Sbjct: 414 VLLKERNIPVRESNEPGAFFLGASIDRTAHSPSFIASPTIDAKRYIESAKIFPFEYGKRE 473

Query: 159 IDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
                   S ++ ++   + L    +     L   L   F  K+   LE   + +   G 
Sbjct: 474 FSAN----SAEIQAIAAHVGLAEPVQKSLSTLLEALTDIFMTKEAFSLETK-VAVSSGGV 528

Query: 219 LRVLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMV 273
           L V  ++  FDD A     R  DI +LR+   E   E+EA++  + Y+ L+G   IG +V
Sbjct: 529 LEVQGARFGFDDAAYRSAKRQEDIHKLRNKELEVPEEVEAEKDGIVYVRLEGEGTIGTLV 588

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAM T+D + + GG  ANFLD GG A  + V +AFKII SD  VK I +NIFGG+ 
Sbjct: 589 NGAGLAMNTVDALTIRGGHCANFLDTGGKATSETVKSAFKIILSDPRVKAIFVNIFGGLT 648

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           R +++ +GI+ A +++ + +P+V+RL G N ++G ++IAES L +      ++AA K++ 
Sbjct: 649 RSEMIAEGIIMAFRDLGMKVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFEEAAAKVIS 708

Query: 394 AV 395
             
Sbjct: 709 LS 710


>gi|282895774|ref|ZP_06303861.1| succinyl-CoA synthetase beta chain [Raphidiopsis brookii D9]
 gi|281199274|gb|EFA74140.1| succinyl-CoA synthetase beta chain [Raphidiopsis brookii D9]
          Length = 404

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 93/430 (21%), Positives = 172/430 (40%), Gaps = 64/430 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I      +     +P P+ V+KSQ++A  R +    
Sbjct: 1   MDLLEYQVKEWFNKIGIPVLPSQRIDHPTDLKR--LKIPYPI-VLKSQVYANDRSQ---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I+  + I    +        G     +  E   D   E YL
Sbjct: 54  ------VGGVKIVETTIDAIAAAQSIFSLPIG-------GELPKVLLAESKYDAQEEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        +      +D +   ++    + +    P           L   + L+
Sbjct: 101 AVVLDTVISRPVLLGCRY--IDWQSPGENMQYVVVEQEFSPFY------ARRLAYFMGLR 152

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+      D+   +Y  F  KD+ L+EINPL I  + ++  L+ KI  ++ A+ RH DI 
Sbjct: 153 GELMQSVSDIVTKMYHLFLHKDLDLVEINPLGISSSCQVMTLNGKIRVNERAINRHPDIA 212

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
              D++ + +R+  +K+ N   + +      G IG + NG G A+ T D +   GG PA 
Sbjct: 213 ---DIATKIARDPGSKRINGMLVDMLGWNNQGEIGILANGNGSALTTWDAVVAAGGKPAV 269

Query: 296 FLDVGGGADQDK--------VAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV- 346
            L++                +    +++  D +V+ ILIN+ G I     + + +   + 
Sbjct: 270 SLNLRHSWSNHTEPTKFSQRMETGLRVLAGDRNVQVILINLLGTIPELSEIPRVMTDFMA 329

Query: 347 --------------KEVKINIP-LVMRLEGANVDIGNR----LIAESGLNVITAIDLDDA 387
                         K +   +P +VMRL G +  +  +    ++     N I   +LD A
Sbjct: 330 LQLEELRCFLNTPHKTLPQRLPKIVMRLAGNDFQVARKSLLSILQLQSENFILVENLDVA 389

Query: 388 AQKIVHAVKG 397
            ++ +   K 
Sbjct: 390 VKEALSLTKS 399


>gi|282898786|ref|ZP_06306773.1| succinyl-CoA synthetase beta chain [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196313|gb|EFA71223.1| succinyl-CoA synthetase beta chain [Cylindrospermopsis raciborskii
           CS-505]
          Length = 404

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 92/430 (21%), Positives = 176/430 (40%), Gaps = 64/430 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQ K    K  +PV     I      +     +P P+ V+KSQ++A  R +    
Sbjct: 1   MDLLEYQVKEWFNKIGIPVLPSQRIDHPTDLKR--LKIPYPI-VLKSQVYANDRSQ---- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++  +    I+  + I    +        G     +  E   +   E YL
Sbjct: 54  ------VGGVKIVETTIDAIAAAQSIFSLPIG-------GELPKVLLAESKYNAQEEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        +      +D +   ++    + +    P           L  ++ L+
Sbjct: 101 AVVLDTVISRPVLLGCRY--IDWQSPGENMQYVVVEQEFSPFY------ARRLAYLMGLR 152

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y  F  KD+ L+EINPL +  + ++  L+ KI  ++ A+ RH DI 
Sbjct: 153 GGLMQSVSDIVTKMYHLFLHKDLDLVEINPLGVSSSCQVMTLNGKIRVNERAINRHPDIA 212

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
              D++ + +R+  +K+ N   + +      G IG + NG G A+ T D +   GG PA 
Sbjct: 213 ---DIASKIARDPGSKRINGMLVDMLGRNNQGEIGILANGTGSALTTWDAVVAAGGKPAV 269

Query: 296 FLDVGGGA--------DQDKVAAAFKIITSDSSVKGILINIFGGIM-------------- 333
            L++               ++    +++ +D +++ ILIN+ G I               
Sbjct: 270 SLNLRHSWLNHTEPTKFSQRMETGLRVLAADRNIQVILINLLGTIPELSEVPRVMTDFMA 329

Query: 334 -RCDVLVKGILSAVKEVKINIP-LVMRLEGANVDIGNR----LIAESGLNVITAIDLDDA 387
            + + L   + ++ K +   +P +VMRL G +  +  +    ++     N I   +LD A
Sbjct: 330 LQLEELKWFLNTSQKTLPQRLPKIVMRLAGNDFQVARKSLLSILQVQSENFILVENLDVA 389

Query: 388 AQKIVHAVKG 397
            ++ V   K 
Sbjct: 390 VKEAVSLTKS 399


>gi|154250057|ref|YP_001410882.1| succinate--CoA ligase (ADP-forming) [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153993|gb|ABS61225.1| Succinate--CoA ligase (ADP-forming) [Fervidobacterium nodosum
           Rt17-B1]
          Length = 355

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 112/390 (28%), Positives = 178/390 (45%), Gaps = 60/390 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVH----AAESAIKTLPGPLYVVKSQIHAGGRGK 56
           M I EY  K LL ++   V + + +             I  L  P  V+KSQ+  GGR K
Sbjct: 1   MKIQEYVGKRLLSEHGFYVPRSLFVKEEDIDSKELTQKILELGFPQ-VLKSQVLVGGRMK 59

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      GGV +  +L+  +  +RE++   +        G     V +E+     +
Sbjct: 60  A----------GGVIIAKNLEESMRALRELVNKEI-------KGEMPEGVLIEEFVKHDK 102

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ELY  + +DRT+  +  I S  GG+DIEE ++ +P K+ K                    
Sbjct: 103 ELYFGITIDRTNRNILMIYSEFGGVDIEEASRMFPNKVLKTY------------------ 144

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
                    +  +    L   F   D++LLEINP+ + K+G +  LD+ +  DDNAL+R 
Sbjct: 145 --SFNDLPEEFKETAKVLLDIFKKLDLTLLEINPIGVTKSGYVM-LDAVMHVDDNALFRQ 201

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E  +  E D             + L G+ G +  GAG+ MAT+D++K +G  PANF
Sbjct: 202 SWAMEQMNEREND------------MVLLGGSYGVIGCGAGIVMATIDMLKEFGFEPANF 249

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
            DVGGGA ++ V  A K ++  S  K I++NIFGGI  C  + + I+   KE   ++ L 
Sbjct: 250 YDVGGGATRENVLEALKKVSRIS--KKIVLNIFGGITDCFQVAEAIVL-FKERHPDVELF 306

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDD 386
           +R+ G   +    L++  GL      D+++
Sbjct: 307 LRISGNKEEEARALLSNIGLT--AVSDMNE 334


>gi|303320235|ref|XP_003070117.1| succinyl-CoA synthetase beta chain, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109803|gb|EER27972.1| succinyl-CoA synthetase beta chain, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 712

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 101/302 (33%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 106 VYVEDGADILRE------LYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLL 158
           V +++    +RE       +L   +DRT+   +FIAS T       E AK +P +  K  
Sbjct: 414 VLLKERNIPVRESNEPGAFFLGASIDRTAHSPSFIASPTIDAKRYIESAKIFPFEYGKRE 473

Query: 159 IDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
                   S ++ ++   + L    +     L   L   F  K+   LE   + +   G 
Sbjct: 474 FSAN----SAEIQAIAAHVGLAEPVQKSLSTLLEALTDIFMTKEAFSLETK-VAVSSAGV 528

Query: 219 LRVLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMV 273
           L V  ++  FDD A     R  DI +LR+   E   E+EA++  + Y+ L+G   IG +V
Sbjct: 529 LEVQGARFGFDDAAYRSAKRQEDIHKLRNKELEVPEEVEAEKDGIVYVRLEGEGTIGTLV 588

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAM T+D + + GG  ANFLD GG A  + V +AFKII SD  VK I +NIFGG+ 
Sbjct: 589 NGAGLAMNTVDALTIRGGHCANFLDTGGKATSETVKSAFKIILSDPRVKAIFVNIFGGLT 648

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           R +++ +GI+ A +++ + +P+V+RL G N ++G ++IAES L +       +AA K++ 
Sbjct: 649 RSEMIAEGIIMAFRDLGMKVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFKEAAAKVIS 708

Query: 394 AV 395
             
Sbjct: 709 LS 710


>gi|239906516|ref|YP_002953257.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha
           chain [Desulfovibrio magneticus RS-1]
 gi|239796382|dbj|BAH75371.1| succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha
           chain [Desulfovibrio magneticus RS-1]
          Length = 705

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 115/396 (29%), Positives = 174/396 (43%), Gaps = 23/396 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+  K LL +  + V  G V      A +A+   PGP Y +K+Q+  GGRGK    
Sbjct: 1   MLLTEHAGKELLAEAAIAVPPG-VALEPDDAGAAMPPFPGP-YFLKAQVLGGGRGKAGGV 58

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              A++ G          +    R +  ST         G R   + +E      R  YL
Sbjct: 59  LPVAEASG----------LAEAARTLFSSTFG-------GVRPPFLRLEAAVPHERAFYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL V R           QGG+D+E +A      +  + + P +        +    L L 
Sbjct: 102 SLGVSRQRKGFCLTIGRQGGVDVEALAGT--DALLVIDVPPSLVCPPYAARAAFFHLGLP 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +A      L   L+    D  + L EINPL      R   LD+K++ DDN       + 
Sbjct: 160 AEAYAPFETLLSRLFGVVADNGLLLAEINPLAYCAGERFVALDAKVTIDDNVATLRPALA 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
             RD       E  A +  LS+++L G +G + NGAGLAMATMD ++  G   ANFLD G
Sbjct: 220 RYRDDRFATPAEGRAAEQRLSFVSLPGRVGLVANGAGLAMATMDALEAAGLPAANFLDFG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++  AF ++ +D +V+   +N++GGI+ C  + + +  A+ +     P+V+R  
Sbjct: 280 GTADAARLRVAFDLLFADPAVEACCVNMYGGILSCADVAEAMACAL-DGDDGRPVVVRFA 338

Query: 361 GANVDIGNRLIAES-GLNVITAIDLDDAAQKIVHAV 395
           G     G   +    G  V  A D+D A   +  AV
Sbjct: 339 GNAAKAGMERLRAMPGNRVRVAEDMDQAVVMLAEAV 374


>gi|283853552|ref|ZP_06370791.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B]
 gi|283571051|gb|EFC19072.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B]
          Length = 704

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 109/388 (28%), Positives = 176/388 (45%), Gaps = 22/388 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+  KAL  +  +    G +      A   +     P + +K+Q  +GGRGK    
Sbjct: 1   MLLTEHAGKALFAEAGIETPPG-LALGPGEAAGFVPPFAAP-WYLKAQTLSGGRGKA--- 55

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV        + +    + G +L        G     + +E      R +YL
Sbjct: 56  -------GGVVRLDDPAGLEAAAEGLFGLSLG-------GQTPPFLRLEPVVPFDRAVYL 101

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL V R    +    + QGG+D+E +A    +++  L + P   +T     +    L L+
Sbjct: 102 SLGVSRERKALCLTVARQGGVDVEGLAGS--EELLVLDVPPPFALTPRLGRAAFFHLGLE 159

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +       L   L+ A     + L EINPL +  +GR   LD+K+  DD+A+     + 
Sbjct: 160 PERFEAFFTLLSRLFAAVDAYGLLLAEINPLAVTPDGRFVALDAKVVVDDHAVCVTPALA 219

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D       E  A  H LS+++L G +G + NGAGLAMATMD +   G + ANFLD G
Sbjct: 220 RFGDDRFATPSERRAVAHKLSFVSLAGRVGLVANGAGLAMATMDALDTAGLSAANFLDFG 279

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G AD  ++ AAF +I +D +V    +N++GGI+ C  + + +   + +     P+V+R  
Sbjct: 280 GAADAPRLTAAFDLIFADPNVTACCVNMYGGILSCLDVAEALAVTLADAPPPRPVVVRFA 339

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDA 387
           G     G   +   GL  ++ A D+D+A
Sbjct: 340 GNGATAGAARLRRLGLPSLLVAGDMDEA 367


>gi|256086475|ref|XP_002579424.1| succinyl-CoA synthetase beta chain [Schistosoma mansoni]
 gi|238664858|emb|CAZ35663.1| succinyl-CoA synthetase beta chain, putative [Schistosoma mansoni]
          Length = 347

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 96/184 (52%), Positives = 136/184 (73%)

Query: 212 IIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
           + +++  L  +D K++FDDNA +R  +I   RD S+ED R+++A +  L+YI LDGNIGC
Sbjct: 145 VNIEDIALVCMDCKLNFDDNASFRQKEIFAQRDWSQEDERDVKASKAGLNYIGLDGNIGC 204

Query: 272 MVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGG 331
           +VNGAGLAMATMD+I+L+GG+PANFLDVGGGA  D+V  AF++ITSD  V  IL+NIFGG
Sbjct: 205 LVNGAGLAMATMDLIQLHGGSPANFLDVGGGATADQVTEAFRLITSDPKVNAILVNIFGG 264

Query: 332 IMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           IMRCDV+ +GI++A  E+ I +P+V+RL+G  V+    ++A S + ++   DLD+AAQ  
Sbjct: 265 IMRCDVIAQGIVAAATELNIKVPIVVRLQGTRVEDAKAILATSHMKILGCSDLDEAAQMS 324

Query: 392 VHAV 395
           V   
Sbjct: 325 VKLA 328



 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 18/154 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLP---------------GPLYVVKSQIHAGG 53
             LL+KY +PV K +V  +V    +A K                      V+K+Q+ AGG
Sbjct: 1   MELLKKYEIPVPKFIVARNVDEVRAACKEFGILPEKELENSGETRESTDIVLKAQVLAGG 60

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGKG +    +  KGGV++  S++  ++   ++LG  + T QTG TG   N +   +   
Sbjct: 61  RGKGTWD---SGLKGGVKIVYSMEEAVNVASQMLGHRIYTAQTGDTGQLCNTLLACERKY 117

Query: 114 ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA 147
             RE YL++++DR+ G    I   QGG++IE++A
Sbjct: 118 SRREHYLAIVLDRSCGGPVMIGCQQGGVNIEDIA 151


>gi|261203545|ref|XP_002628986.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081]
 gi|239586771|gb|EEQ69414.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis SLH14081]
 gi|239608195|gb|EEQ85182.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ER-3]
 gi|327349379|gb|EGE78236.1| succinyl-CoA ligase alpha-chain [Ajellomyces dermatitidis ATCC
           18188]
          Length = 687

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 90/302 (29%), Positives = 159/302 (52%), Gaps = 16/302 (5%)

Query: 106 VYVEDGADI-----LRELYLSLLVDRTSGMVAFIASTQGGMDIE-EVAKDYPQKIFKLLI 159
           +  E G  I       +    +++DR S     +AS       +  +++ +     +   
Sbjct: 391 LLKEKGVAIGESNEASDFLFGIVIDRKSRSPCILASPTTNPATQVSLSRKFSFTYGRTQF 450

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
            P       ++ ++   L L   +      L  NL   F +K+  +LE   + +  +G  
Sbjct: 451 TP----DQANIRAVASHLNLGESSLEPLAKLAQNLLDIFMNKEAFVLETM-VSVGSDGSF 505

Query: 220 RVLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVN 274
           ++  ++  FDD A     R  DI +LR+ +EE   E+EA+   + Y+ L  +G+IG +VN
Sbjct: 506 QINGARFGFDDAAFKSSKRQEDIHKLRNKAEEVPEEVEAENEGIVYVKLAGEGSIGTLVN 565

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           GAGLAM T+D +  +GG  ANFLD GG A  + + ++F+II SD  VK I +NIFGG+  
Sbjct: 566 GAGLAMNTVDALTHHGGHCANFLDTGGKATSETIKSSFRIILSDPRVKTIFVNIFGGLTL 625

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
            D++  GI+ A +++ + +P+V+RL G N ++G ++IA+SGL +      ++AA+K++  
Sbjct: 626 GDMIANGIIMAFRDLDMKVPVVVRLRGTNEELGQKMIADSGLPLHAFDSFEEAAKKVISL 685

Query: 395 VK 396
            +
Sbjct: 686 SR 687


>gi|119184194|ref|XP_001243025.1| hypothetical protein CIMG_06921 [Coccidioides immitis RS]
          Length = 467

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 101/299 (33%), Positives = 160/299 (53%), Gaps = 17/299 (5%)

Query: 106 VYVEDGADILRE------LYLSLLVDRTSGMVAFIAS-TQGGMDIEEVAKDYPQKIFKLL 158
           V +++    +RE       +L + +DRT+   +FIAS T       E AK +P +  K  
Sbjct: 169 VLLKERNIPVRESNEPGAFFLGVSIDRTAHSPSFIASPTIDAKRYIESAKKFPFEYGKRE 228

Query: 159 IDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
                   S ++ ++   + L    +     L   L   F  K+   LE   + +   G 
Sbjct: 229 FSAN----SAEIQAIAAHVGLAEPVQKSLSTLLEALTDIFMTKEAFSLETK-VAVSSAGA 283

Query: 219 LRVLDSKISFDDNA---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMV 273
           L V  ++  FDD A     R  DI +LR+   E   E+EA++  + Y+ L+G   IG +V
Sbjct: 284 LEVQGARFGFDDAAYRSAKRQEDIHKLRNKELEVPEEVEAEKDGIVYVRLEGEGTIGTLV 343

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAM T+D + + GG  ANFLD GG A  + V +AFKII SD  VK I +NIFGG+ 
Sbjct: 344 NGAGLAMNTVDALTIRGGHCANFLDTGGKATSETVKSAFKIILSDPRVKAIFVNIFGGLT 403

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           R +++ +GI+ A +++ + +P+V+RL G N ++G ++IAES L +      ++AA K++
Sbjct: 404 RSEMIAEGIIMAFRDLGMKVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFEEAAAKVI 462


>gi|254410665|ref|ZP_05024444.1| ATP-grasp domain family [Microcoleus chthonoplastes PCC 7420]
 gi|196182871|gb|EDX77856.1| ATP-grasp domain family [Microcoleus chthonoplastes PCC 7420]
          Length = 417

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 36/355 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAKAL R+  +PV     I      +     +P P+ V+KSQ+           
Sbjct: 1   MDLLEYQAKALFREIGIPVLPSQCIDHPRDLKQ--LDIPYPV-VLKSQVP---------- 47

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +      GG+R   +    I+  R I   +++       G   N +  E   D  +E YL
Sbjct: 48  KGGRGRAGGIRTVENTIDAIATARAIFNLSIL-------GKYPNVLLAESHYDAEQEFYL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D T      + S QGG+ +E V     + + +    P           L   + LQ
Sbjct: 101 AVILDYTLRRPVLLGSCQGGIHVENVMAQMQRVVVEEDFSPFY------ARRLAFKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y+    KD+ L+EINPL +  N  +  LD KI+ +D+AL R  ++ 
Sbjct: 155 GDLIESVSDIVQKMYQLLIQKDLDLVEINPLGVSANHEVMALDGKIAVNDHALGRQSELA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
            L   S   + +   +  +L +    GNIG + N   LA AT+D++    G PA+ L V 
Sbjct: 215 NLAS-SLTHTPQPADQPTDLQWTDSQGNIGILCNSPCLAAATLDLVYKAKGKPASCLIVD 273

Query: 301 GGADQDKVAAAFKI---------ITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
           G A  D  +AA  +         +T   +++ +L+NI       + + + I S +
Sbjct: 274 GYASWDVPSAASPVQQLQNALQQLTDTQNIQVVLVNILSNEAASEAVAEVIASYL 328


>gi|296816593|ref|XP_002848633.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480]
 gi|238839086|gb|EEQ28748.1| succinyl-CoA ligase alpha-chain [Arthroderma otae CBS 113480]
          Length = 664

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 94/286 (32%), Positives = 148/286 (51%), Gaps = 33/286 (11%)

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E  L+L +DR S       S+    +  +   +Y  +             + D+AS+ D 
Sbjct: 403 EFTLALAIDRKSCGPCINISSGANGNTHKFPFNYHTR-------------NFDIASIADT 449

Query: 177 LEL---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
           L+       A     DL   L   F  K+  LLE+   +      + VLD++  FDD A 
Sbjct: 450 LDFAKYHPSATKSLEDLLHKLMNIFVSKEAFLLEVKVRLTQDTNDVHVLDARFGFDDAAY 509

Query: 234 Y---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
               R  DI  LR+ ++E   E+EA++               VNGAGLAM T+D + L+G
Sbjct: 510 RSSGRQGDIHALRNKADEVPAEVEAEKD--------------VNGAGLAMNTVDALTLHG 555

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
           G+ ANFLD GG A  + V ++F++I SD+ VK I +NIFGG+ RCD++ +GI+ A +++ 
Sbjct: 556 GSCANFLDTGGKATAETVKSSFRVILSDTRVKSIFVNIFGGLTRCDMIAEGIIMAFRDLG 615

Query: 351 INIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + +P+V+RL G N  +G ++IAESGL +      + AA+K +   +
Sbjct: 616 MKVPVVVRLRGTNEQLGQKMIAESGLPLHAFDSFEHAAKKAISLSQ 661


>gi|213420241|ref|ZP_03353307.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 189

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 96/188 (51%), Positives = 128/188 (68%)

Query: 107 YVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
            VE   DI +ELYL  +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G  
Sbjct: 2   LVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPM 61

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
                 L   L L+G+       +F  L   F ++D++L+EINPL+I K G L  LD K+
Sbjct: 62  PYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKL 121

Query: 227 SFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII 286
             D NAL+R  D++E+RD S+ED RE +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+
Sbjct: 122 GADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV 181

Query: 287 KLYGGAPA 294
           KL+GG PA
Sbjct: 182 KLHGGEPA 189


>gi|312383989|gb|EFR28838.1| hypothetical protein AND_02715 [Anopheles darlingi]
          Length = 225

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 105/179 (58%), Positives = 135/179 (75%)

Query: 220 RVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLA 279
             LD+K+ FDDNA +R  D+  LRD+S+ED +E+EA + +L+YIALDG+IGC+VNGAGLA
Sbjct: 27  FALDAKMRFDDNAEFRQKDLFSLRDLSQEDKKEVEASKFDLNYIALDGSIGCLVNGAGLA 86

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           MATMDIIKL+GG PANFLDVGGGA    V  AFKIITSD  V  IL+NIFGGIMRCDV+ 
Sbjct: 87  MATMDIIKLHGGDPANFLDVGGGASVKAVKEAFKIITSDPKVHAILVNIFGGIMRCDVIA 146

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +GI+ A KE+ I +P+++RL+G NV+    LI +S L ++   DLD+AA   VH  + V
Sbjct: 147 EGIIQATKELNIKMPIIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAAMLSVHLAQIV 205


>gi|4406564|gb|AAD20032.1| GTP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
          Length = 199

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 93/185 (50%), Positives = 129/185 (69%)

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLS 261
           D + +E+NP      G++   D+KI+FDDNA +R  DI  + D SE +  E EA +++L 
Sbjct: 3   DATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLK 62

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           YI LDGNI C VNGAGLAMAT DII L GG PANFLD+GGG  + +V  AFK++T+D  V
Sbjct: 63  YIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKV 122

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITA 381
           + IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +A
Sbjct: 123 EAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSA 182

Query: 382 IDLDD 386
           IDL+D
Sbjct: 183 IDLED 187


>gi|218245402|ref|YP_002370773.1| ATP-grasp domain-containing protein [Cyanothece sp. PCC 8801]
 gi|218165880|gb|ACK64617.1| ATP-grasp domain protein [Cyanothece sp. PCC 8801]
          Length = 418

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 97/434 (22%), Positives = 179/434 (41%), Gaps = 75/434 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +P+     I+++   +     +P P+ V+KSQ+ +GGRGK    
Sbjct: 1   MDLLEYQAKELFHRVGIPILPSQPIANLSEIKR--LQIPYPV-VLKSQVRSGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    I+  + I    ++       G     +  E   +   E +L
Sbjct: 55  -------GGIRFVENTIDAIAAAQAIFSLPIL-------GEYPEVILAEARYNTQAEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L D        + S+QGG+++E +       I K+++D     +      L   + L+
Sbjct: 101 CVLFDYQLQCPVLLGSSQGGIEVENLL----SHIEKVVLD--GEFSPFYARRLAIKMGLE 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   +Y+ F +KD+  +EINPL +   G +  LD KI+ +D+AL RH D+ 
Sbjct: 155 GKLIHAVSSIIEKMYQLFREKDLDWIEINPLAVSPTGEVMALDGKIAVNDSALPRHQDLL 214

Query: 241 ELRDVSEEDSREI-----EAKQH-----NLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +L    +  +  +     +A+       +L   +  G +G + N  GLA+ T D++    
Sbjct: 215 DLLTSQQSKASSMTLTSGKAEPWPPILQHLRSTSSKGEVGIISNSWGLALTTWDLLVKQK 274

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSD----SSVKGILINIFGGIMRCDVLVKGILSAV 346
           G P     +     +  +   F +  +     + ++ ILINI G     + + + I    
Sbjct: 275 GKPDCAFVMLEKKPEKSIIEQFSLALAQAMQLTHLQVILINILGSPETAEAIAQAIADYY 334

Query: 347 KE---------------------------------VKINIPLVMRLEGANVDIGNRLIAE 373
           +                                  V   +PLV+RL G ++D   + +  
Sbjct: 335 EPYSKQKNEDRLPRPTGANTSERQGRRQNQTRSLSVTEPLPLVVRLVGGDIDAIKQHL-- 392

Query: 374 SGLNVITAIDLDDA 387
           SGL +    DL+ A
Sbjct: 393 SGLTIYWQEDLETA 406


>gi|257058438|ref|YP_003136326.1| ATP-grasp domain protein [Cyanothece sp. PCC 8802]
 gi|256588604|gb|ACU99490.1| ATP-grasp domain protein [Cyanothece sp. PCC 8802]
          Length = 418

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 97/434 (22%), Positives = 179/434 (41%), Gaps = 75/434 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +P+     I+++   +     +P P+ V+KSQ+ +GGRGK    
Sbjct: 1   MDLLEYQAKELFHRVGIPILPSQPIANLSEIKR--LQIPYPV-VLKSQVRSGGRGKA--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    I+  + I    ++       G     +  E   +   E +L
Sbjct: 55  -------GGIRFVENTIDAIAAAQAIFSLPIL-------GEYPEVILAEARYNTQAEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +L D        + S+QGG+++E +       I K+++D     +      L   + L+
Sbjct: 101 CVLFDYQLQCPVLLGSSQGGIEVENLL----SHIEKVVLD--GEFSPFYARRLAIKMGLE 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   +Y+ F +KD+  +EINPL +   G +  LD KI+ +D+AL RH D+ 
Sbjct: 155 GKLIHAVSSIIEKMYQLFREKDLDWIEINPLAVSPTGEVMALDGKIAVNDSALPRHQDLL 214

Query: 241 ELRDVSEEDSREI-----EAKQH-----NLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +L    +  +  +     +A+       +L   +  G +G + N  GLA+ T D++    
Sbjct: 215 DLLTSQQSKASSMTLTSGKAEPWPPILQHLRSTSSKGEVGIISNSWGLALTTWDLLVKQK 274

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSD----SSVKGILINIFGGIMRCDVLVKGILSAV 346
           G P     +     +  +   F +  +     + ++ ILINI G     + + + I    
Sbjct: 275 GKPDCAFVMLEKKPEKSIIEQFSLALAQAMQLTHLQVILINILGSPETAEAIAQAIADYY 334

Query: 347 KE---------------------------------VKINIPLVMRLEGANVDIGNRLIAE 373
           +                                  V   +PLV+RL G ++D   + +  
Sbjct: 335 EPYSKQKNEDRLPRPTGANTSERQGRRQNQTRSLSVTEPLPLVVRLVGGDIDAIKQHL-- 392

Query: 374 SGLNVITAIDLDDA 387
           SGL +    DL+ A
Sbjct: 393 SGLTIHWQEDLETA 406


>gi|213619250|ref|ZP_03373076.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 183

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/193 (38%), Positives = 104/193 (53%), Gaps = 10/193 (5%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +VDR+S  V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLE 170

Query: 181 GQARIDGGDLFPN 193
           G+       +F  
Sbjct: 171 GKLVQQFTKIFMG 183


>gi|302497886|ref|XP_003010942.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291174488|gb|EFE30302.1| succinyl-CoA synthetase beta subunit, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 510

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 99/285 (34%), Positives = 158/285 (55%), Gaps = 21/285 (7%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++ +DR +       S     +I +   +Y  +             + D+AS+ D L L
Sbjct: 239 LAIAIDRKTCGPCVTVSKGTDGNIRKFPFNYRAR-------------NFDIASVKDTLGL 285

Query: 180 ---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
                 A      L   L   F  K+  LLE+   I      ++++D++  FDD A    
Sbjct: 286 TKYHPMATESLEKLLHGLMNIFVTKEAFLLEVKAGIAPDAKDIQIIDARFGFDDAAYRSS 345

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGG 291
            R  DI  LR+ +EE   E+EA++  + YI L  +G IG +VNGAGLAM T+D + L+GG
Sbjct: 346 GRQGDIHVLRNKAEEVPAEVEAEKDGIVYITLPGEGRIGTLVNGAGLAMNTVDALTLHGG 405

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
           + ANFLD GG A  + V ++F++I SD  VKGI +NIFGG+ +CD++ +GI+ A +++ +
Sbjct: 406 SCANFLDTGGKATAETVKSSFRVILSDPRVKGIFVNIFGGLTKCDMIAEGIMMAFRDLGM 465

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +P+V+RL G N ++G ++IAESGL +      + AA+K++   K
Sbjct: 466 KVPVVVRLRGTNEELGQKMIAESGLPLHAFDSFEQAAKKVISLSK 510


>gi|213579892|ref|ZP_03361718.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 185

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 111/184 (60%), Positives = 146/184 (79%)

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV 273
            K G L  LD K+  D NAL+R  D++E+RD S+ED RE +A Q  L+Y+ALDGNIGCMV
Sbjct: 1   TKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMV 60

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAM TMDI+KL+GG PANFLDVGGGA +++V  AFKII SD +VK +L+NIFGGI+
Sbjct: 61  NGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDNVKAVLVNIFGGIV 120

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           RCD++  GI+ AV+EV +N+P+V+RLEG N ++G + +A+SGLN+I A  L DAAQ++V 
Sbjct: 121 RCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTDAAQQVVA 180

Query: 394 AVKG 397
           AV+G
Sbjct: 181 AVEG 184


>gi|157364314|ref|YP_001471081.1| succinate--CoA ligase (ADP-forming) [Thermotoga lettingae TMO]
 gi|157314918|gb|ABV34017.1| Succinate--CoA ligase (ADP-forming) [Thermotoga lettingae TMO]
          Length = 358

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 111/391 (28%), Positives = 169/391 (43%), Gaps = 60/391 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEY  K +L++    V K V+I+        ++ L  P +V+K+Q+  GGR K    
Sbjct: 22  MKIHEYVGKNVLKENGFNVPKSVLINGPFERRD-LEQLDLP-HVLKAQVLVGGRMKA--- 76

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV    S +     I  +LG  +        G +   V VE+  +  RE YL
Sbjct: 77  -------GGVVFSRSYEETYQKISYLLGRKI-------KGEKCTKVLVEEVFEHDREEYL 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR    +  + S  GG+DIE+V K    KI    I  L     + V          
Sbjct: 123 SILIDRDIRDITVLYSEFGGIDIEDVEKQKIVKIKMEDISKL----PDHVR--------- 169

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   D+   L   F +KD++LLEINP+         +LD  +  D+NALYR     
Sbjct: 170 --------DITYKLVNLFIEKDLTLLEINPIAFNNKDEYMMLDCVMHIDENALYRQNWCP 221

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           ++     E                L G++G +  GAG+ MAT D +   G  P  F D+G
Sbjct: 222 QIPSFDPE----------------LQGDVGIIGCGAGIVMATFDAVIECGLKPGAFCDLG 265

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           GGA ++        ++  +  K I+ NIFGGI     +   I+   K     I +  R+ 
Sbjct: 266 GGAKKENALKVLNDLSKRN--KKIVANIFGGITDTMEIASAIIE-CKGKNPEIQIFARIT 322

Query: 361 GANVDIGNRLIAESGLNVI-TAIDLDDAAQK 390
           G N     +L+ E+G+ V  +  DL +A ++
Sbjct: 323 GNNEMFSRKLLTENGIKVFDSTTDLINALRR 353


>gi|76156544|gb|AAX27731.2| SJCHGC05155 protein [Schistosoma japonicum]
          Length = 243

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 87/230 (37%), Positives = 122/230 (53%), Gaps = 5/230 (2%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E+Q K L+  Y V V K +V+ +      A        YV+K+QI AGGRG G F++
Sbjct: 17  NLQEFQCKELMSNYGVNVQKFIVVRNPSEVNLAKNNFIVEEYVIKAQIPAGGRGMGVFRD 76

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                KGGV +      +   + ++LG+ LITKQT  +G  V+ V V +  DI RE Y +
Sbjct: 77  ---GFKGGVHLTKDPNEMAHIVMKMLGNHLITKQTTSSGILVSQVMVAEALDIRRETYFA 133

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L+DR S     IA +QGGMDIEE+AK  P  I K  I+  IGVT E      + L    
Sbjct: 134 ILMDRISNSPIMIACSQGGMDIEELAKHCPSTIIKESINVTIGVTDEQACRFANALGFTP 193

Query: 182 QAR--IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           Q +   +      NLYK F   D   +EINP    K+G++   D+K++FD
Sbjct: 194 QTKLYEETCKQIRNLYKMFTALDCVQIEINPFGETKDGQIVCFDAKLAFD 243


>gi|194336478|ref|YP_002018272.1| ATP-grasp domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308955|gb|ACF43655.1| ATP-grasp domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 398

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 99/407 (24%), Positives = 161/407 (39%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L    +  +E++G  + T         V  V V +  D   E 
Sbjct: 63  L----------VKLGLNLDEAYAAAKEMIGRQIGTS-------VVRQVIVAEMLDHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+  +R       + S +GG+DIE+        + +L+I      T E +        
Sbjct: 106 YLSIAGNRDGSE--LLLSNKGGVDIEDNW----DTVKRLVISLDETPTIEHITEAALEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
             G+       +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FTGEVAERVAKIASRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q  +   A             GNI  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRSYTEAEQQIMDIDARIKGSVKLVEVPGGNIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG+ AN+ +  G      V A  + I    ++K I++   G I     +     GI+
Sbjct: 279 VARGGSIANYAEYSGDPPDWAVEALTETICRLPNIKHIIV--GGAIANFTDVKATFNGII 336

Query: 344 SAVKEVKI-----NIPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           +  +E K      N+ + +R  G N + G    + + E G ++    
Sbjct: 337 NGFRESKSKGYLENVQIWVRRGGPNENQGLAAMKKLQEEGFDIHVYD 383


>gi|218437307|ref|YP_002375636.1| ATP-grasp domain protein [Cyanothece sp. PCC 7424]
 gi|218170035|gb|ACK68768.1| ATP-grasp domain protein [Cyanothece sp. PCC 7424]
          Length = 416

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 98/442 (22%), Positives = 169/442 (38%), Gaps = 74/442 (16%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EY AK L  +  +P+     I      +     +P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYHAKELFHQVGIPILPSQPIHDPGELKR--LHIPYPV-VLKSQVRAGGRGKS--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    I+  R I    +        G     +  E   +   E +L
Sbjct: 55  -------GGIRFVENTIDAIAAARAIFTLPIF-------GEYPEVLLAEARYNAQEEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + S +GGM+IE + +   + +           +      L   + + 
Sbjct: 101 AIVLDYQLQRPVLLGSPKGGMNIEALLEYMQRVV------IEDEFSPFYARRLAKKMGIA 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +Y  F +KD+ L+EINPL + + G +  LD KIS +D AL RH ++ 
Sbjct: 155 ENLIQSVSAIIEKMYYLFIEKDLDLIEINPLGVSQQGEVMALDGKISVNDYALSRHPELV 214

Query: 241 EL----RDVSEEDSREIEAKQHNLSYIALD---GNIGCMVNGAGLAMATMDIIKLYGGAP 293
            L    ++VS E+         NL ++      GN+  + N   LA+    +I    G P
Sbjct: 215 GLTSAKKEVSSENGNGESEPIINLHWLEDSDELGNVAIICNSLDLALMNWQLITQEKGKP 274

Query: 294 ANFLDVGGGAD----QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV--- 346
           +  L +   +       ++    + IT  S++K IL+NI G     + + K I + +   
Sbjct: 275 SYCLILQENSYSPSIPQQLEMGLEKITELSALKVILVNIVGSPEVSETVAKAIANYLQPQ 334

Query: 347 --------------------------------KEVKINIPLVMRLEGANVDIGNRLIAES 374
                                           +     I  V+RL    ++     +  S
Sbjct: 335 LKQQLSPKGEERLIRATGAASTRKRSTKTRSQQSQPHQIQWVIRLINGEIEALQETL--S 392

Query: 375 GLNVITAIDLDDAAQKIVHAVK 396
            L V     LDDA  K +  +K
Sbjct: 393 VLPVYWTKTLDDAVSKTLSILK 414


>gi|119629180|gb|EAX08775.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_a
           [Homo sapiens]
          Length = 193

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 104/177 (58%), Positives = 137/177 (77%)

Query: 222 LDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
           +D+KI+FD N+ YR   I +L+D ++ED R+ +A + NL+YI LDGNIGC+VNGAGLAMA
Sbjct: 1   MDAKINFDSNSAYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMA 60

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
           TMDIIKL+GG PANFLDVGGGA   +V  AFK+ITSD  V  IL+NIFGGIMRCDV+ +G
Sbjct: 61  TMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQG 120

Query: 342 ILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           I+ AVK+++I IP+V+RL+G  VD    LIA+SGL ++   DLD+AA+ +V   + V
Sbjct: 121 IVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIV 177


>gi|330935373|ref|XP_003304935.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1]
 gi|311318125|gb|EFQ86872.1| hypothetical protein PTT_17669 [Pyrenophora teres f. teres 0-1]
          Length = 724

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 150/337 (44%), Gaps = 46/337 (13%)

Query: 99  TGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL 158
               ++ +   +G+      YL +   R++     IA+               Q++ +  
Sbjct: 393 KSHNIHLILPPEGSPSTH--YLGISPHRSNRSPCIIAAPTANPS------QLNQRVRRFP 444

Query: 159 IDPLIGVTSEDVASLCDMLEL---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            D   G T+E +A+    L+L     +A+     L  NL+  + +K+   + +N  + + 
Sbjct: 445 FDYCSGPTAEGIANAIAHLQLDAAPPKAKAQVVQLIQNLWTLYTEKEAIDVHVNLALSVD 504

Query: 216 NGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIAL------- 265
           +  L V    + FDD A     R   +  LRD +   + + EA+   + Y+ L       
Sbjct: 505 DDELLVYSPYLFFDDAAFKSGKRQAHLHALRDEASVSATDREAEDAGIVYVPLASPMFPP 564

Query: 266 ----DGN---------------IGCMVNGAGLAMATMDIIKLYGGAP------ANFLDVG 300
                G                +G +VNGAGLA+ T+D +     AP      ANFLD G
Sbjct: 565 GTTQKGTQTPPSSPAEDETRNLVGTLVNGAGLALNTIDTLSARLSAPPYATSAANFLDTG 624

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G A  D +  +FK+I SD  V  + +NIFGG+  CD++ +GI+ A KE+ +  P+V+RL 
Sbjct: 625 GKATSDTIKTSFKLILSDPRVSVVFVNIFGGLTLCDMIAEGIILAFKELDVKKPVVVRLR 684

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           G N   G +++ ++ L +    D ++A +K+     G
Sbjct: 685 GTNEAKGQKVLEDAKLPIHAFDDFEEAVKKVGELANG 721


>gi|46127045|ref|XP_388076.1| hypothetical protein FG07900.1 [Gibberella zeae PH-1]
          Length = 577

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 14/325 (4%)

Query: 83  IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA------- 135
             E+L    +             VY ++  D+ +  +L++ +DR                
Sbjct: 3   AAEVLPEDGLKSYLKGDLQPRKTVYFQEELDLHKHWHLTMTIDRKDCRPVIKIRDAKPDN 62

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
           +T+G  + E   K+Y   +     D      ++ +  +   L L   AR         L 
Sbjct: 63  NTRGAPEGELFQKNYLFDLS----DTDSEFMTKTIQKIASELGLVSAARQGFQQGLIALR 118

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ-ELRDVSEEDSREIE 254
           K F +     LE++ L   +N ++   +S+  FDD+A  +  ++   L +   ED  E+ 
Sbjct: 119 KIFMEAQAIFLEVDVL-RQRNSKIVFANSRFCFDDDAKKKARNVYLPLWEPLMEDEAELY 177

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKI 314
           A+   L Y+ ++G+IG +VNGAGLAMAT D I ++GG  ANFLD GG A  D +  AFKI
Sbjct: 178 AETFGLVYVKMNGDIGTVVNGAGLAMATNDAICVHGGKSANFLDAGGQATNDTMKRAFKI 237

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI-NIPLVMRLEGANVDIGNRLIAE 373
           +  D  VK I +NI+GGI RCD++ + I+ AV  +   ++P+V+RL+G N + G +L+ +
Sbjct: 238 VMDDRRVKIIFVNIYGGITRCDMIAESIIDAVNSLGHQSVPMVVRLQGTNSEEGLKLLED 297

Query: 374 SGLNVITAIDLDDAAQKIVHAVKGV 398
           + L +    D D A +K V   + +
Sbjct: 298 ANLGIHVEADFDKATKKAVELAESI 322


>gi|258568988|ref|XP_002585238.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704]
 gi|237906684|gb|EEP81085.1| hypothetical protein UREG_05927 [Uncinocarpus reesii 1704]
          Length = 486

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 95/285 (33%), Positives = 151/285 (52%), Gaps = 11/285 (3%)

Query: 118 LYLSLLVDRTSGMVAFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +L + +DRT+   + IAS            K +P    K          S ++ ++   
Sbjct: 206 FFLGISIDRTAHSASVIASPSAEPTQHLSSTKKFPFGYGKKKFPAN----SPEIQAIAAH 261

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---L 233
           + L G A+     L   L   F  K+   LE   + I   G L V  ++  FDD A    
Sbjct: 262 VGLAGSAQKSLAGLTEALVDIFMTKEAFSLEAK-VAITGAGTLEVQGARFGFDDAAYRSA 320

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMDIIKLYGG 291
            R  DI +LR+   E   E+EA++  + Y+ L+G   IG +VNGAGLAM T+D + + GG
Sbjct: 321 RRQEDIHKLRNKQLEVPEEVEAEKDGIVYVKLEGEGSIGTLVNGAGLAMNTVDALTIRGG 380

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
             ANFLD GG A  + V +AF+I+ SD  VK I +NIFGG+ R +++ +GI+ A +++ +
Sbjct: 381 HCANFLDTGGKATSETVKSAFRILLSDPRVKAIFVNIFGGLTRSEMIAEGIIMAFRDLGM 440

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            +P+V+RL G N ++G ++IAES L +      ++A+ KI+   +
Sbjct: 441 KVPVVVRLRGTNEELGQKMIAESKLPLHAFDSFEEASAKIISLSR 485


>gi|289616472|emb|CBI56787.1| unnamed protein product [Sordaria macrospora]
          Length = 625

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/287 (30%), Positives = 148/287 (51%), Gaps = 14/287 (4%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++ +DR++   A + +     D  E A+     +     D   G     +  +   L+L
Sbjct: 342 LAVGIDRSARSPAILVAPSIE-DWIEEAQRTTAPVKSFPFDYRRGPDGLVIERIASHLQL 400

Query: 180 Q---GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
                 A      L   L   F +K+  LL  +   + + G ++V+ ++ +FD  A +R+
Sbjct: 401 SNKGDSAVDSLRRLIKTLTNLFYEKEGLLLTTHL--VERLGEIKVVHARFAFD-QASFRN 457

Query: 237 L----DIQELRDVSEEDSREIEAKQHNLSYIALDGN---IGCMVNGAGLAMATMDIIKLY 289
                 I+ +   + +D  EIEA++  + Y+ L G    IG +VNGAGLAM T+D +   
Sbjct: 458 GTPPDKIKAMHVRATDDPAEIEAERSGIVYVKLPGEDVTIGTLVNGAGLAMNTVDALADA 517

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG  ANFLD GG A  + V  +F+ I  D  VK + +NIFGG+   D++ +GI+ A KE+
Sbjct: 518 GGKAANFLDTGGKATSETVKESFRTILQDPRVKVVFVNIFGGLTLGDMIARGIIMAFKEL 577

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            + +P+V+R+ G N + G ++IA+SGL +    D ++AA K +   +
Sbjct: 578 SLTVPVVVRIRGTNEEEGQKIIADSGLPLYAFDDFEEAAAKAIELSR 624


>gi|172037272|ref|YP_001803773.1| putative succinyl-CoA synthetase subunit beta [Cyanothece sp. ATCC
           51142]
 gi|171698726|gb|ACB51707.1| putative succinyl-CoA synthetase beta chain [Cyanothece sp. ATCC
           51142]
          Length = 417

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 94/437 (21%), Positives = 170/437 (38%), Gaps = 67/437 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +PV     I+ +   +     +  P+ V+KSQ+H+         
Sbjct: 7   MDLLEYQAKELFHQVGIPVLPSQPIAQLSELKH--LHIRYPV-VLKSQVHS--------- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    ++  + I    ++       G     +  E   D   E +L
Sbjct: 55  -GGRGRAGGIRFVQNTIDAVAAAQAIFSLPIL-------GEYPEVILAEARYDTQDEFFL 106

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+D        + S +GG+D+E + K   + I         G +      L   + L+
Sbjct: 107 SILLDYQLQRPVLMGSAKGGIDVETLLKHMHKVILDQ------GFSPFYARRLATKMGLR 160

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G        +   +Y+ F +KD+ L+EINPL +  +G +  LD KI+ +D AL RHLD+ 
Sbjct: 161 GPLIHGVSTILEKMYQLFIEKDLDLIEINPLAVSASGEVMALDGKITVNDMALSRHLDLL 220

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALD----------GNIGCMVNGAGLAMATMDIIKLYG 290
                  + +  +   Q+ ++               GN+G + NG GL ++T D++    
Sbjct: 221 SFLSPKADQTSSVSPNQNIVTTPPQKPRWLGSKEKGGNVGIIANGLGLTLSTWDLMVNQK 280

Query: 291 GAPANFLDVGGGADQDKVAA----AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
           G P     +   +    +      A + + +   ++ ILINI        ++ +G+L   
Sbjct: 281 GQPLGAFIIEEKSSSKSLIKQLGIAVEKMLTLPEIQIILINIVSSEPTSALVAQGMLDYC 340

Query: 347 KEVKINIPLVMRLE---GANVDIGNRL-------------------IAE-----SGLNVI 379
           +   +      RL    GAN     ++                   I       S L + 
Sbjct: 341 QPTMVTPDSEERLSRPTGANSTRQRQINSSPNSNPIQWVLRLATGDIKSIETSLSDLPIY 400

Query: 380 TAIDLDDAAQKIVHAVK 396
              DL +A +K V   +
Sbjct: 401 CFEDLSEAVKKTVALTQ 417


>gi|21673915|ref|NP_661980.1| citrate lyase, subunit 1 [Chlorobium tepidum TLS]
 gi|21647055|gb|AAM72322.1| citrate lyase, subunit1 [Chlorobium tepidum TLS]
          Length = 398

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 100/407 (24%), Positives = 163/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSV---HAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPKRLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L   I   RE+LG+ + T +       V  V V +  D   E 
Sbjct: 63  L----------VKIGLNLDEAIQASREMLGAKVGTAE-------VRQVIVAEMLDHDAEF 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S++ +R       + S  GG+DIE+        + ++ I      T E + +L     
Sbjct: 106 YVSIIGNRDGAE--LLISKYGGVDIEDNW----DSVRRIQIPLDEHPTIEQLTALAKEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
            +G+     G +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEIAERVGKICSRLVLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q  +   +             G I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMDIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYADAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + I    ++K I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPPDWAVEALTETICRLPNIKHIIV--GGAIANFTDVKATFSGII 336

Query: 344 SAVKEVKIN-----IPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           + ++E K       + + +R  G N   G    R + E G ++    
Sbjct: 337 NGLRESKSKGYLEGVKIWVRRGGPNEAQGLAAIRKLQEEGFDIHVYD 383


>gi|238498400|ref|XP_002380435.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
 gi|220693709|gb|EED50054.1| succinyl-CoA synthetase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
          Length = 655

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 92/275 (33%), Positives = 150/275 (54%), Gaps = 11/275 (4%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             + + +      +++L+L VDRT+     IAST         +K +P   F        
Sbjct: 383 KSIPINETEPSESDIFLNLTVDRTALSPCVIASTSADFAPSHTSK-FPFPYFNTDFSSS- 440

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
              S  + S+   L L         +L   L++ F +K+  LLE+      +   L V  
Sbjct: 441 --DSPIIKSIASHLHLPETTHETLAELVQALWQIFKEKEAYLLEVRVNPSTEG--LEVRG 496

Query: 224 SKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGL 278
           ++  FDD A     R  ++  LR+ +EE   E+EA++  + Y+ L G   IG +VNGAGL
Sbjct: 497 ARFGFDDAAFRSSGRQKEVHSLRNPAEEVHEEVEAEKDGIVYVKLQGEGSIGTLVNGAGL 556

Query: 279 AMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL 338
           AM T+D + ++GG  ANFLD GG A  + V ++F+IITSD  VK I +NIFGG+ RCD++
Sbjct: 557 AMNTVDALTIHGGHCANFLDTGGKATSETVKSSFRIITSDPRVKAIFVNIFGGLTRCDMI 616

Query: 339 VKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
            +GI+ A +++ +++P+V+RL G N + G ++++E
Sbjct: 617 AEGIIMAFRDLDMSVPVVVRLRGTNEEEGQKMVSE 651


>gi|189346749|ref|YP_001943278.1| ATP-grasp domain protein [Chlorobium limicola DSM 245]
 gi|189340896|gb|ACD90299.1| ATP-grasp domain protein [Chlorobium limicola DSM 245]
          Length = 398

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 164/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSV---HAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPNRLEQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  ++  RE++G  + T         +  V V +  D   E 
Sbjct: 63  L----------VKLGLNLEEAVAASREMIGREIGTA-------VIRQVIVAEMLDHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL +  +R    V    S +GG+DIEE        + +L I      + E +        
Sbjct: 106 YLCINGNRDGAEVLL--SNRGGVDIEENW----DTVRRLFIPIDENPSVERLTEFAAEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
             G+     G +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FTGEIAERVGKIVSRLVLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAK----------QHNLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+          + ++ ++ + G  I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAELQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + + +  ++K I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPSDWAVEALTETVCALPNIKHIIV--GGAIANFTDVKATFNGII 336

Query: 344 SAVKEVKI-----NIPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           +  +E K      N+ + +R  G N + G    R + + G ++    
Sbjct: 337 NGFRESKSKGYLENVKIWVRRGGPNENQGLAAIRKLQDEGFDIHVYD 383


>gi|110597562|ref|ZP_01385848.1| citrate lyase, subunit 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340881|gb|EAT59355.1| citrate lyase, subunit 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 398

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 163/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI   +       A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPNRLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  +   +E++G  + T         +  V V +  D   E 
Sbjct: 63  L----------VKLGLNLEQALEAAQEMIGREIGTS-------VIRQVIVAEMLDHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+  +R       + S +GG+DIE+        + +L I      T E++  +     
Sbjct: 106 YLSIAGNRDGAE--LLLSNKGGVDIEDNW----DTVKRLFIPLDENPTIEEITEVAHQAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
             G+       +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FTGEVAERVAKIASRLILCFDNEDSQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q  +   A             G++  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMDIDARIKGSVKLVEVPGGDVALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + I    ++K I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPPDWAVEALTETICRLPNIKHIIV--GGAIANFTDVKATFSGII 336

Query: 344 SAVKEVKI-----NIPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           +  +E K      N+ + +R  G N + G    + + E G ++    
Sbjct: 337 NGFRESKSKGYLENVKIWVRRGGPNENQGLAAIKKLQEEGFDIHVYD 383


>gi|307153608|ref|YP_003888992.1| Succinate--CoA ligase (ADP-forming) [Cyanothece sp. PCC 7822]
 gi|306983836|gb|ADN15717.1| Succinate--CoA ligase (ADP-forming) [Cyanothece sp. PCC 7822]
          Length = 420

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 172/447 (38%), Gaps = 78/447 (17%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EY AK L  +  +PV     I      +     +P P+ V+KSQ+ AGGRGK    
Sbjct: 1   MDLLEYHAKELFDEVGIPVLPSQPIHDTGELKR--LQIPYPV-VLKSQVRAGGRGKS--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    I+  R I    ++       G     +  E   D   E +L
Sbjct: 55  -------GGIRFVENTIDAIAAARAIFSLPIL-------GEYPEVILAEARYDAQEEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + S +GGMD+E + +   + +           +      L   + + 
Sbjct: 101 AVVLDYQLQRPVLLGSVKGGMDVEALLEYMQRVV------IEEEFSPFYARRLVKKMGIA 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                    +   +Y  F +KD+ L+EINPL +   G +  LD KIS +D AL RH ++ 
Sbjct: 155 EGLIESVSTIIEKMYYLFWEKDLDLIEINPLGVNAQGEVMALDGKISVNDCALDRHPELA 214

Query: 241 EL----RDV----SEEDS---REIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
            L    +D     +EE++    E     H L  +   GN+G + N  GLA+ T D+I   
Sbjct: 215 CLICSKKDYLQGAAEENALRDCETVVDLHWLEGVDELGNVGIICNSHGLALTTWDLIVQA 274

Query: 290 GGAPANFLDVGGGAD----QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
            G P   L +  G+D      ++    + +   S++K +L+NI       + + + I + 
Sbjct: 275 QGKPNYCLILEEGSDCPSLSQQLELGLEQMMELSALKAVLVNIVASPEVSETVAQAIANY 334

Query: 346 VKEVKI-----------------------------------NIPLVMRLEGANVDIGNRL 370
           ++                                        I  V+RL    V      
Sbjct: 335 LQPQLKQQLPQKGEERIIRATGAGSSRKRLVKTRSQSSKPQQIQWVIRLINGEVQPIQES 394

Query: 371 IAESGLNVITAIDLDDAAQKIVHAVKG 397
           +  S L +     LDDA  + +  +K 
Sbjct: 395 L--SLLPLHWTKTLDDAVNQTISILKS 419


>gi|145219675|ref|YP_001130384.1| ATP citrate lyase subunit 1 [Prosthecochloris vibrioformis DSM 265]
 gi|145205839|gb|ABP36882.1| ATP citrate lyase subunit 1 [Chlorobium phaeovibrioides DSM 265]
          Length = 398

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 165/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPERLLQLGEANKWLRDSKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V+++ +L+      +E+LG  + T +       +  V V +  +   E 
Sbjct: 63  L----------VKIDLNLEEAYEAAKEMLGRQIGTAE-------IRQVIVAEMLEHDAEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+  +R       + S +GG+DIE+      +    L + P    T ED+  +     
Sbjct: 106 YVSIAGNRDGAE--LLLSNKGGIDIEDNWDTVKRLQIPLDVTP----TIEDLTKIASSAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHL 237
            +G+       +   L   F ++D   +EINPL+I   + R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEVAERVAKIASRLILCFDNEDAQSIEINPLVIRNSDMRFAALDAVMNVDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G  I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + I    ++K I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPSDWAVEALTETICQLPNIKHIIV--GGAIANFTDVKATFSGII 336

Query: 344 SAVKEVKIN-----IPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           +  +  K N     + + +R  G N + G    + +A+ G ++    
Sbjct: 337 NGFRASKANGYLEGVKIWVRRGGPNENQGLAAIKKLADEGFDIHVYD 383


>gi|325066867|ref|ZP_08125540.1| succinyl-CoA synthetase subunit beta [Actinomyces oris K20]
          Length = 255

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 84/242 (34%), Positives = 144/242 (59%), Gaps = 7/242 (2%)

Query: 161 PLIGVTSEDVASLCDMLELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
           PL G+T      + +    + G    +   +   L++ F  +D +L+E+NPL+   +GR+
Sbjct: 1   PLEGITPAVAHRIVEAAGFEAGPLADEVAAVIERLWEVFTAEDATLVEVNPLVKATDGRI 60

Query: 220 RVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLA 279
             LD K++ DDN+ +RH    EL D +  D  E  A++  L+Y+ L+G +G + NGAGL 
Sbjct: 61  IALDGKVTLDDNSRFRHPAHAELVDNAATDPLEARAREAGLNYVRLEGEVGVLGNGAGLV 120

Query: 280 MATMDIIK-----LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR 334
           M+T+D++        G  PANFLD+GGG+  + +A   +++ SD  V+ IL+N+FGGI  
Sbjct: 121 MSTLDVVAGAGERHGGMKPANFLDLGGGSSAEVMATGLEVVASDPQVRAILVNVFGGITS 180

Query: 335 CDVLVKGILSAVKEV-KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
           CD + +GI++AV+ +  +  P+V+RL+G N D G  ++A++ +  +T +D  D A  +V 
Sbjct: 181 CDTVAQGIVTAVESLGGLPKPVVVRLDGNNADTGRAILADAAIEGVTVVDTMDGAADVVT 240

Query: 394 AV 395
           A+
Sbjct: 241 AI 242


>gi|171687991|ref|XP_001908936.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943957|emb|CAP69609.1| unnamed protein product [Podospora anserina S mat+]
          Length = 634

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 18/284 (6%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           +L++ VDR++     +A+     D  E      + + +   D   G     +  +   L 
Sbjct: 360 FLAIGVDRSTRSPCILAAPTVDDDQIE------KMVKRYSFDYRHGPDELAIERVASRLH 413

Query: 179 --LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
             L+  A      L   L   F +K+  L+E    I+ + G ++V+ ++  FDD A    
Sbjct: 414 ISLKESAHESLRRLVHRLSDIFYEKEAYLMETE--IVERLGEIKVVGARFGFDDAAYRSC 471

Query: 235 -RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMVNGAGLAMATMDIIKLYGG 291
            R  ++Q+LR+ + ED+ E+EA++  + YI L+GN  IG +VNGAGLAM T+D +   GG
Sbjct: 472 GRQTELQKLRNTAVEDASELEAEKSGIIYIKLEGNGTIGTLVNGAGLAMNTVDAL---GG 528

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI 351
              NFLD GG A  + V   F++I  D  V+ I +NIFGG+   D++  GI+ A KE+  
Sbjct: 529 HATNFLDTGGKATSETVKHGFEVILKDPRVRVIFVNIFGGLTLGDMIANGIIMAFKELSP 588

Query: 352 NIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            +P+V+R+ G N   G +LI ESGL +    D + A  K +   
Sbjct: 589 RVPVVVRIRGTNEKEGQKLIEESGLPLYAFDDFEAAKAKAIELS 632


>gi|289803981|ref|ZP_06534610.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 192

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 79/192 (41%), Positives = 115/192 (59%)

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           ++V  S + + +     LG  L+T QT   G  VN + VE   DI +ELYL  +VDR+S 
Sbjct: 1   MKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSR 60

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            V F+AST+GG++IE+VA++ P  I K+ +DPL G        L   L L+G+       
Sbjct: 61  RVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTK 120

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEED 249
           +F  L   F ++D++L+EINPL+I K G L  LD K+  D NAL+R  D++E+RD S+ED
Sbjct: 121 IFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQED 180

Query: 250 SREIEAKQHNLS 261
            RE +A Q  L+
Sbjct: 181 PREAQAAQWELN 192


>gi|193216250|ref|YP_001997449.1| ATP-grasp domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089727|gb|ACF15002.1| ATP-grasp domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 398

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/407 (21%), Positives = 164/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAE---SAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A    +K+ +PV   VVI +    +    A K +     VVK+    GGR K  
Sbjct: 3   KILEGTAMKFFQKWGIPVPSYVVIMNPDRLKLLAEANKWMKESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V+V  +L+   + +RE++G  + T         +  V + +  +   E 
Sbjct: 63  L----------VKVGLNLEEADAAVREMIGKKVGTT-------VIKQVIIAEQLEHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+   R       + S  GG+D+EE       K+ ++  D     T E +  L     
Sbjct: 106 YLSINSHR--QGTDLLLSKYGGIDVEENW----DKVQRITFDVDEQPTKEQLIQLAHDAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
            +G+       +   L     ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEIAERVAKIASRLVLCHENEDAQNIEINPLVIRKSDMRFAALDAVMNVDWDARFRHP 219

Query: 238 DIQELRDVSEEDSREIEAK----------QHNLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + +  SE      +A+          + ++ ++ + G  I  +  G G ++   D +
Sbjct: 220 D-WDFKPTSEIGRPYTDAELQIMDIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + I +  ++K I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPPDWAVEALTETICALPNIKHIIV--GGAIANFTDVKATFNGII 336

Query: 344 SAVKEVK-----INIPLVMRLEGANVDIGNRL---IAESGLNVITAI 382
           +  ++ K      ++ + +R  G N   G  +   + E G ++    
Sbjct: 337 NGFRDSKDRGLLKDVKIWVRRGGPNEAAGLEMMRALREEGFDINVYD 383


>gi|119357118|ref|YP_911762.1| ATP citrate lyase subunit 1 [Chlorobium phaeobacteroides DSM 266]
 gi|119354467|gb|ABL65338.1| ATP citrate lyase subunit 1 [Chlorobium phaeobacteroides DSM 266]
          Length = 398

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 164/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPERLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  +   RE++G  + T         V  V V +  +   E 
Sbjct: 63  L----------VKLGLNLEEALEASREMIGRKIGTA-------VVRQVIVAEMLEHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+  +R       + ST+GG+DIE+        + +L I      + E +  +     
Sbjct: 106 YVSIAGNRDGAE--LLLSTKGGVDIEDNW----DTVKRLFIPMDETPSVERLTEVAAEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
             G+       +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FTGEVAERVAKIAARLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G  I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPYTEAEQQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + I     ++ I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPPDWAVEALTETICRLPKIRHIIV--GGAIANFTDVKATFSGII 336

Query: 344 SAVKEVKI-----NIPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           + ++E +      N+ + +R  G N + G    R + + G ++    
Sbjct: 337 NGLRESRSKGYLQNVTIWVRRGGPNENQGLAAIRKLQDEGFDIHVYD 383


>gi|167933006|ref|ZP_02520093.1| succinyl-CoA synthetase, beta subunit [candidate division TM7
           single-cell isolate TM7b]
          Length = 285

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/324 (32%), Positives = 156/324 (48%), Gaps = 39/324 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EY+AK LL    +P+ +G V  +V+  ++    +     V+KSQ+  GGRGK    
Sbjct: 1   MRLLEYEAKNLLSACGMPIPRGKV-FAVNELQAIAAPI-----VLKSQVPIGGRGKL--- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV++      + S  R++    +        G   + +  E+  DI RE Y 
Sbjct: 52  -------GGVQIVRHQSDLESVARKMFNLKI-------KGFLPSKLLAEEILDISREFYF 97

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           SL ++R +  +  +A T GG++IE               D +          L D L++ 
Sbjct: 98  SLNINRQTAGIELLAHTSGGVEIES-----QDTADFFRRDIVNEKFEALADELADYLDIA 152

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +  +   D+  N Y+ F D D  LLEINPLI+ K+ +L   D+KI+ DD A +RHLD  
Sbjct: 153 DKTFL-LQDIIENAYRCFIDNDCLLLEINPLILTKDSKLIAGDAKITVDDAAAFRHLD-W 210

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              D S E         HN   +  DG +  + NGAGLAM T+D +   G  PANFLD+G
Sbjct: 211 RFEDNSTE---------HNFIILNRDGAVATIANGAGLAMTTVDAVTASGLKPANFLDIG 261

Query: 301 GGADQDKVAAAFKIITSDSSVKGI 324
           G A  DKV   F+ IT+  ++K I
Sbjct: 262 GTATSDKVLDCFRQITTLDNIKVI 285


>gi|156053373|ref|XP_001592613.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980]
 gi|154704632|gb|EDO04371.1| hypothetical protein SS1G_06854 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 580

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 31/327 (9%)

Query: 80  ISDIREILGST-LITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQ 138
             D  ++L    +  +Q       V+              +L++ +DR++    FI   Q
Sbjct: 269 EEDAFKLLDQKGISGRQDPSKKDPVHR-------------HLTISIDRSNRCPQFIL--Q 313

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAF 198
           G +   E+    P K  K      +G+T+         L+L          +   L++ F
Sbjct: 314 GPVKKNEI----PSKPKKSPFQYDLGITTGLRQKCATHLQLVH-QHKLLHPIISGLFELF 368

Query: 199 CDKDMSLLEIN-----PLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDS 250
            +K+  LL+       P       R+ +  +   FDD A     RH +I  L     +D 
Sbjct: 369 KEKEAFLLQTTIKGAPPWKERFQHRVSIEHANFGFDDAAFKSANRHSEIHSLPRADIQDP 428

Query: 251 REIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKV 308
            E EA++H + YI L  DGNIG +VNGAGLAM T+D +   GG  ANFLD GG A  + V
Sbjct: 429 AETEAQKHGIVYIKLAGDGNIGTLVNGAGLAMNTVDALADAGGKAANFLDTGGKATAETV 488

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
             +F++I  D  VK + +NIFGG+   D++ +GIL A  E+ + +P+V+R+ G N   G 
Sbjct: 489 KKSFEVILRDERVKVVFVNIFGGLTLGDMIAEGILLAFGELGVRVPVVVRIRGTNEKEGQ 548

Query: 369 RLIAESGLNVITAIDLDDAAQKIVHAV 395
           ++IAESGL +    D D+AA K++   
Sbjct: 549 KIIAESGLPLYAYDDFDEAAAKVIELA 575


>gi|78188767|ref|YP_379105.1| citrate lyase, subunit 1 [Chlorobium chlorochromatii CaD3]
 gi|78170966|gb|ABB28062.1| ATP citrate lyase subunit 1 [Chlorobium chlorochromatii CaD3]
          Length = 398

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAE---SAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VV+   +       A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVVMDPNRLAHLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  +   RE++G  + T         ++ V V +  D   E 
Sbjct: 63  L----------VKLGLNLEQAVEASREMIGRKIGTAM-------ISQVIVAEMLDHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+  +R       + S +GG+DIE+        + +L I      T E +  +     
Sbjct: 106 YISIAGNRDGSE--LLVSNRGGVDIEDNW----DTVRRLAITIGETPTIERITEVATEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
            +G+       +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEIAERVAKIASRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNLDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G NI  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMEIDARIKGSVKFVEVPGGNIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG  AN+ +  G      V A  + I    ++K I++   G I     +     GI+
Sbjct: 279 VARGGTIANYAEYSGDPADWAVEALTETICRLPNIKHIIV--GGAIANFTDVRATFSGII 336

Query: 344 SAVKEVKI-----NIPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
           +  +  K      N+ + +R  G N   G    + + E G ++    
Sbjct: 337 NGFRSSKARGYLENVKIWVRRGGPNEAQGLAAMKQLQEEGFDIHVYD 383


>gi|12407235|dbj|BAB21375.1| ATP-citrate lyase beta-subunit [Chlorobium limicola]
          Length = 398

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 160/405 (39%), Gaps = 48/405 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  I   +E+LG+ + T + G        V + +  +   E 
Sbjct: 63  L----------VKIGLNLEQAIEAAKEMLGAKVGTAEIG-------QVIIAEMLEHDAEF 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S++ ++       + S  GG+DIE+        + ++ I+     T E +  L     
Sbjct: 106 YVSIIGNKDGAE--LLISKHGGVDIEDNW----DSVRRIQIELDENPTIEQLTELAKDAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
            +G+     G +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEIAERVGKICSRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q  +   +             G I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMEIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYADAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSA 345
              GG  AN+ +  G      V A  + I    ++K I++               GI++ 
Sbjct: 279 VARGGTIANYAEYSGDPADWAVEALTETICRLPNIKHIIVGGAIANFTDVKATFSGIING 338

Query: 346 VKEVKIN-----IPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
            +E K       + + +R  G N   G    + + E G ++    
Sbjct: 339 FRESKSKGYLEGVKIWVRRGGPNEAQGLAAIKQLQEEGFDIHVYD 383


>gi|189205729|ref|XP_001939199.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975292|gb|EDU41918.1| succinyl-CoA ligase subunit alpha [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 720

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 44/315 (13%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YL +   R++   + IA+               Q++ +   D   G ++  +A     L+
Sbjct: 407 YLGISPHRSNRSPSIIAAPTANPS------QLNQRVRRFPFDYRSGPSAGAIADAIAHLQ 460

Query: 179 L---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           L     +A+     L  NL+  + +K+     +N  + + +  L +    + FDD A   
Sbjct: 461 LDAAPPKAKAQVVQLIHNLWTLYTEKEAIDAHVNLALSVDDDELLIYSPYLFFDDAAFKS 520

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIAL-----------------------DGN- 268
             R   +  LRD +   + + +A+   + Y+ L                       DG  
Sbjct: 521 GKRQAHLHALRDEASISATDQQAEDAGIVYVPLASPVFPTGTRQKGTQTSPSSAAKDGPR 580

Query: 269 --IGCMVNGAGLAMATMDIIKLYGGAP------ANFLDVGGGADQDKVAAAFKIITSDSS 320
             +G +VNGAGLA+ T+D +     AP      ANFLD GG A  D +  +FK++ SD  
Sbjct: 581 NLVGTLVNGAGLALNTIDTLSARLSAPPHATSAANFLDTGGKATSDTIKTSFKLVLSDPR 640

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           V  + +NIFGG+  CD++ +GI+ A KE+ +  P+V+RL G N   G +++ ++ L +  
Sbjct: 641 VGVVFVNIFGGLTLCDMIAEGIILAFKELDVKKPVVVRLRGTNEAKGQKVLEDAKLPIHA 700

Query: 381 AIDLDDAAQKIVHAV 395
             D ++A +K+    
Sbjct: 701 FDDFEEAVKKVGELA 715


>gi|169610772|ref|XP_001798804.1| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15]
 gi|160702150|gb|EAT83662.2| hypothetical protein SNOG_08494 [Phaeosphaeria nodorum SN15]
          Length = 661

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/394 (24%), Positives = 166/394 (42%), Gaps = 31/394 (7%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKELPADSKG-GVRVESSLKSVISD 82
           + +     +AI         V     A  G G+G  +      +  GV +          
Sbjct: 271 VKNPKPIAAAIGGFQASPGKVMGHAGAWTGLGEGTAESKYKALENVGVTMVDHPAKFGGV 330

Query: 83  IREILG-------STLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           ++EIL        + L   Q     +  N              YL +  DR++   + IA
Sbjct: 331 MKEILAQSGRNVKNILSADQLSEELATANIRISPPPESPRSSHYLGISPDRSARSPSIIA 390

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL---QGQARIDGGDLFP 192
           +               +++ ++  D   G T E ++     L+L     +A+    +L  
Sbjct: 391 APTANPS------QLHKRVIRIPFDYRTGPTPEVISRAIAHLQLDAAPPRAKTQTVELIN 444

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA---LYRHLDIQELRDVSEED 249
           +L+  +   +   L +   +      + V +    FDD A     R   +   R  ++  
Sbjct: 445 SLWSMYTATEAIDLHVRLAVSSAADEIAVYEPYFFFDDAAFKSNKRQSALHAKR--TQPS 502

Query: 250 SREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIK---LYGGAPANFLDVGG 301
             ++EA+   + Y+ L      G +G +VNGAGLAM T D++    +     ANFLD GG
Sbjct: 503 DIDLEAENAGIVYVPLGPEGEKGLVGTLVNGAGLAMNTNDVLNSRLMPHTQSANFLDTGG 562

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A    ++ +FK+I SD  VK + +NIFGG+  CD++ +GI+ A KEV +  P+V+RL G
Sbjct: 563 KATSSTISTSFKLILSDPRVKVVFVNIFGGLTLCDMIAEGIILAFKEVGVRKPVVVRLRG 622

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            N + G R++ E+ L +      ++A +K+   V
Sbjct: 623 TNEEKGGRVLEEAKLPIHAFDGFEEAVEKVGELV 656


>gi|126659214|ref|ZP_01730352.1| succinate--CoA ligase [Cyanothece sp. CCY0110]
 gi|126619519|gb|EAZ90250.1| succinate--CoA ligase [Cyanothece sp. CCY0110]
          Length = 412

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 92/439 (20%), Positives = 167/439 (38%), Gaps = 73/439 (16%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +PV     I+ +   +     +  P+ V+KSQ+H+         
Sbjct: 1   MDLLEYQAKELFHQVGIPVLPSQPIAQLSELKH--LHIRYPV-VLKSQVHS--------- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    ++  + I    ++       G     +  E   D   E +L
Sbjct: 49  -GGRGRAGGIRFVQNTIDAVAAAQAIFSLPIL-------GEYPEVILAEARYDTQEEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+D        + S +GG+D+E + K       K+++D   G +      L   + L+
Sbjct: 101 SILLDYQLQRPVLMGSAKGGIDVETLLKHTQ----KVVLD--QGFSPFYARRLATKMGLK 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   +Y+ F +KD+ L+EINPL +  +G +  LD KI+ +D AL RHLD+ 
Sbjct: 155 GRLIHGVSTILEKMYQLFIEKDLDLIEINPLAVSASGEVMALDGKITVNDTALSRHLDLL 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGC-----------MVNGAGLAMATMDIIKLY 289
                 + D       Q N+                      + NG+GL + T D+I   
Sbjct: 215 SFLTP-KADRPSTVTPQGNIVTTPPQKPRWLGSKDKGGNVGIIGNGSGLTLTTWDLILNQ 273

Query: 290 GGAPANFLDVGGGADQDKVAA----AFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
            G P     +   +    +      A   I + + V+ ILINI       D++ + +   
Sbjct: 274 KGKPIGAFIIEEKSSSKSLIKQLGIAIDKILNIAEVEVILINIVSSEQTSDLVAEAMKDY 333

Query: 346 VKEVKIN-----------------------------IPLVMRLEGANVDIGNRLIAESGL 376
            + +++                              +  V+RL            +   L
Sbjct: 334 CQPLEVTSDNEEQLSRPTSANSAHQRKVNPNLNSNAVKWVLRLA-TGDLESRET-SFGDL 391

Query: 377 NVITAIDLDDAAQKIVHAV 395
            +    DL++A +K V  +
Sbjct: 392 PIHCFEDLNEAVKKTVALI 410


>gi|312214014|emb|CBX94016.1| similar to succinyl-CoA ligase subunit alpha [Leptosphaeria
           maculans]
          Length = 700

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 26/296 (8%)

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+ +   R++   + IA+               Q++ +   D   G T   + +     +
Sbjct: 406 YIGISPARSARSPSIIAALTANPS------HLHQRVKRFPFDYRQGPTQAVIEAALAHAQ 459

Query: 179 L---QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY- 234
           L     +AR     L  NL+K + +K+     +   + +    + V +  + FDD A   
Sbjct: 460 LDAAPPKARAQTATLITNLWKLYKEKEAVDAHVCLALSVDTDEILVYNPHLFFDDAAFKS 519

Query: 235 --RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN---------IGCMVNGAGLAMATM 283
             RH D+  LR  S     +++A+ H + YI L+           IG +VNGAGLAM T+
Sbjct: 520 NNRHPDLHSLRPKSSLSPTDLDAEHHGIVYIRLESPPASPSPRNLIGTLVNGAGLAMNTI 579

Query: 284 DIIKLYGGAP----ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           DI+     AP    ANFLD GG A    +  +F+++  D  V  + +NIFGG+ RCD++ 
Sbjct: 580 DILHTR-LAPTTTCANFLDTGGKATAHTIKTSFELLLRDPRVAVLFVNIFGGLTRCDMIA 638

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +GI+ A +EV +  P+V+RL+G N ++G +++  +G+ ++   + ++A +++   V
Sbjct: 639 EGIVLAYREVGVRKPVVVRLKGTNEEVGGKVLEGAGVPILAVEEFEEAVRRVGELV 694


>gi|78186923|ref|YP_374966.1| citrate lyase, subunit 1 [Chlorobium luteolum DSM 273]
 gi|78166825|gb|ABB23923.1| ATP citrate lyase subunit 1 [Chlorobium luteolum DSM 273]
          Length = 398

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 156/405 (38%), Gaps = 48/405 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPERLMQLGEANKWLRDSKLVVKAHEAIGGRYKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+      +E++G  + T         V  V V +  +   E 
Sbjct: 63  L----------VKIGLNLEEAYEAAKEMIGREIGTA-------VVRQVIVAEMLEHDAEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+  +R       + S +GG+DIE+        + +L I      + E +        
Sbjct: 106 YVSIAGNRDGAE--LLLSNKGGVDIEDNW----DTVKRLFIPLDETPSLEKLTETAADAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
             G+       +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FTGEVAERVAKIASRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G  I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMEIDARIKGSVKFVEVPGGEIALLTAGGGASVFYSDAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSA 345
              GG  AN+ +  G      V A  + I    ++K I++               GI++ 
Sbjct: 279 VARGGTIANYAEYSGDPADWAVEALTETICQLPNIKHIIVGGAIANFTDVKATFSGIING 338

Query: 346 VKEVKIN-----IPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
            +  K       + + +R  G N + G    + + + G ++    
Sbjct: 339 FRASKAKGYLDGVKIWVRRGGPNENQGLAAIKKLEDEGFDIHVYD 383


>gi|193212663|ref|YP_001998616.1| ATP-grasp domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193086140|gb|ACF11416.1| ATP-grasp domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 398

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 160/405 (39%), Gaps = 48/405 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A  L  K+ +PV   VVI           A K L     VVK+    GGR K  
Sbjct: 3   KILEGPAMKLFNKWGIPVPNYVVIMDPDRLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  I   +E+LG+ + T + G        V + +  +   E 
Sbjct: 63  L----------VKIGLNLEQAIEAAKEMLGAKVGTAEIG-------QVIIAEMLEHDAEF 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S++ ++       + S  GG+DIE+        + ++ I+     T E +  L     
Sbjct: 106 YVSIIGNKDGAE--LLISKHGGVDIEDNW----DSVRRIQIELDENPTIERLTELAKDAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
            +G+     G +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FEGEIAERVGKICSRLILCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDYDARFRHA 219

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q  +   +             G I  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMEIDSRIKGSVKFVEVPGGEIALLTAGGGASVFYADAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSA 345
              GG  AN+ +  G      V A  + I    ++K I++               GI++ 
Sbjct: 279 VARGGTIANYAEYSGDPADWAVEALTETICRLPNIKHIIVGGAIANFTDVKATFSGIING 338

Query: 346 VKEVKIN-----IPLVMRLEGANVDIGN---RLIAESGLNVITAI 382
            +E K       + + +R  G N   G    + + E G ++    
Sbjct: 339 FRESKSKGYLEGVKIWVRRGGPNEAQGLAAIKQLQEEGFDIHVYD 383


>gi|116180274|ref|XP_001219986.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51]
 gi|88185062|gb|EAQ92530.1| hypothetical protein CHGG_00765 [Chaetomium globosum CBS 148.51]
          Length = 636

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 97/284 (34%), Positives = 149/284 (52%), Gaps = 18/284 (6%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L + +DRT+     IAS       EE + +  + + +   D    + +  +  +   L+L
Sbjct: 362 LGISIDRTARSPCIIASPTA----EETSLN--ESVERYPFDYGSDLDALVIEQVARHLQL 415

Query: 180 QGQA--RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY--- 234
                       L   L   F DK+   L  +  I+  +G L V+ ++  FDD A     
Sbjct: 416 SPGESGVKSLRHLLKALTAIFYDKEAFFLSTS--IVENSGELMVVGARFGFDDAAYRSCG 473

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDG--NIGCMVNGAGLAMATMDIIKLYGGA 292
           R  ++Q+LR+++ ED  EIEA+++ + YI L G   IG +VNGAGLAM T+D +    G 
Sbjct: 474 RQAELQQLRNIAAEDPCEIEAEKNCIVYIKLKGPGTIGTLVNGAGLAMNTVDALA---GH 530

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
            ANFLD GG A    V  +F+II  D  V+ I +NIFGG+   D++ +GI+ A KE+  +
Sbjct: 531 AANFLDTGGKATSQTVKQSFEIILRDPRVRVIFVNIFGGLTLGDMIARGIIMAFKELSPS 590

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +P+V+R+ G N   G RLI+ESGL +    D + AA K +   K
Sbjct: 591 VPVVVRIRGTNERKGQRLISESGLPLYAFDDFEAAAAKAIELSK 634


>gi|37288581|gb|AAQ90515.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1247]
          Length = 167

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 117/167 (70%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EEDS+E+EA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEVEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288517|gb|AAQ90483.1| succinyl-CoA synthetase beta subunit [Bacillus cereus ATCC 4342]
          Length = 167

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 117/167 (70%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDRNV 167


>gi|189500291|ref|YP_001959761.1| ATP-grasp domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495732|gb|ACE04280.1| ATP-grasp domain protein [Chlorobium phaeobacteroides BS1]
          Length = 398

 Score =  209 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 166/407 (40%), Gaps = 52/407 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A     K+ +PV   VV+   +       A K L     VVK+    GGR K  
Sbjct: 3   KILEGSAMKFFDKWGIPVPNYVVVMDPNRLAQLGEANKWLRESKLVVKAHEAIGGRYKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  +   RE+LG  + T +       +  V V +  D   E 
Sbjct: 63  L----------VKLGLNLEEAVEASREMLGKKIGTAE-------IRQVIVAEMLDHDAEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+  +        + S  GG+DIE+        + ++ +      + E++ +L +   
Sbjct: 106 YLSM--NGNKDGAELLVSKHGGVDIEDNW----DTVKRIQVPLDEAPSIEELTALAESAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRHL 237
            + +     G +   L   F ++D   +EINPL+I K + R   LD+ ++ D +A +RH 
Sbjct: 160 FEKEIAERVGKIASRLLLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRHP 219

Query: 238 DIQELRDVSEEDSREIEAKQH----------NLSYIALDG-NIGCMVNGAGLAMATMDII 286
           D  + + VSE      EA+Q           ++ ++ + G  +  +  G G ++   D +
Sbjct: 220 D-WDFKPVSEIGRPFTEAEQQIMELDARIKGSVKFVEVPGGEVALLTAGGGASVFYADAV 278

Query: 287 KLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGIL 343
              GG+ AN+ +  G      V A  + +    ++K I++   G I     +     GI+
Sbjct: 279 VARGGSIANYAEYSGAPPDWAVEALTETLCKLPNIKHIIV--GGAIANFTDVRATFGGII 336

Query: 344 SAVKEVKIN-----IPLVMRLEGANVDIGNR---LIAESGLNVITAI 382
           + ++E K N     + + +R  G N   G      + + G ++    
Sbjct: 337 NGLRESKTNGYLKGVKIWVRRGGPNEAEGLAAISKLKDEGFDIHVYD 383


>gi|37288573|gb|AAQ90511.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1123]
          Length = 167

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA ++ L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYGLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288507|gb|AAQ90478.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1127]
 gi|37288511|gb|AAQ90480.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1135]
 gi|37288515|gb|AAQ90482.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|37288527|gb|AAQ90488.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 728]
 gi|37288529|gb|AAQ90489.1| succinyl-CoA synthetase beta subunit [Bacillus cereus ATCC 10987]
 gi|37288531|gb|AAQ90490.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 810]
 gi|37288533|gb|AAQ90491.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 812]
 gi|37288535|gb|AAQ90492.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 813]
 gi|37288537|gb|AAQ90493.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 816]
 gi|37288539|gb|AAQ90494.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 817]
 gi|37288541|gb|AAQ90495.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 818]
 gi|37288543|gb|AAQ90496.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 819]
 gi|37288545|gb|AAQ90497.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 820]
 gi|37288547|gb|AAQ90498.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 823]
 gi|37288549|gb|AAQ90499.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 824]
 gi|37288551|gb|AAQ90500.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 825]
 gi|37288553|gb|AAQ90501.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 826]
 gi|37288555|gb|AAQ90502.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 827]
 gi|37288557|gb|AAQ90503.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 828]
 gi|37288559|gb|AAQ90504.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 829]
 gi|37288561|gb|AAQ90505.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 831]
 gi|37288563|gb|AAQ90506.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|37288567|gb|AAQ90508.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288569|gb|AAQ90509.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288591|gb|AAQ90520.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|37288593|gb|AAQ90521.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 267]
 gi|37288647|gb|AAQ90548.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288651|gb|AAQ90550.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 830]
 gi|37288653|gb|AAQ90551.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|37288655|gb|AAQ90552.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|57233289|gb|AAW48231.1| succinyl-CoA synthetase beta subunit [Bacillus cereus NC7401]
 gi|57233291|gb|AAW48232.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233293|gb|AAW48233.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233295|gb|AAW48234.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233297|gb|AAW48235.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233299|gb|AAW48236.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233301|gb|AAW48237.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|57233303|gb|AAW48238.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073252|gb|ABU45984.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|156073254|gb|ABU45985.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|156073256|gb|ABU45986.1| succinyl-CoA synthetase beta subunit [Bacillus anthracis]
 gi|156073258|gb|ABU45987.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073260|gb|ABU45988.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073262|gb|ABU45989.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073264|gb|ABU45990.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073266|gb|ABU45991.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073268|gb|ABU45992.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073270|gb|ABU45993.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073272|gb|ABU45994.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073274|gb|ABU45995.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073276|gb|ABU45996.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073278|gb|ABU45997.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073280|gb|ABU45998.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|156073282|gb|ABU45999.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073284|gb|ABU46000.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073286|gb|ABU46001.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073290|gb|ABU46003.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073294|gb|ABU46005.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073296|gb|ABU46006.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073298|gb|ABU46007.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
          Length = 167

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 117/167 (70%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|251772178|gb|EES52748.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 416

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 98/398 (24%), Positives = 170/398 (42%), Gaps = 48/398 (12%)

Query: 1   MNIHEYQAK-ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M ++E++A  A+ +KY +PV + +  + ++ A +       P  VVKS +  G RGK   
Sbjct: 1   MKLYEHEALGAIFKKYKIPVPRYIFATDMNDAVNQFVE-KEPGVVVKSMVLVGKRGKA-- 57

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V+V S    V   +R++    +  +++           VE+  DI +E Y
Sbjct: 58  --------GAVKVVSDKAKVPDVVRDLATREVYGEKSIGA-------LVEEKLDIEKEFY 102

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           LS+         A I S  GGMD+EE+    P+ I   +I  +  V    +      +  
Sbjct: 103 LSVTYSTKDRAPAIIFSEHGGMDVEEID---PKLIHTHVISDVRSVYPYQIRQFLTGIGF 159

Query: 180 QG-QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNALYR 235
                     ++  N+Y AF   +  LLEINPL++ ++G   ++   D+ +  DD+A   
Sbjct: 160 SDKDLLRPLSEVIVNVYHAFVGAECRLLEINPLVVARSGDKRKIVAADAVVILDDDASVN 219

Query: 236 HLDIQELRDV-------SEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDI 285
              +   R          E+D+  I+   H     SY+ L+G+I  M  G G +  T + 
Sbjct: 220 PAVVYGARSAQGRPMTQREQDAILIDQGDHRGKAGSYVELEGDIAMMTFGGGGSTVTAET 279

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL----VKG 341
               G   AN  D+GG    +K+    +II S   +KG+L+   GG      +     +G
Sbjct: 280 AIEAGLRIANLTDIGGNPPAEKMYRISRIILSKPGIKGVLV--CGGTASNTRIDVTLGEG 337

Query: 342 ILSAVKEVKI------NIPLVMRLEGANVDIGNRLIAE 373
           +  A+ ++        N+  V+R  G     G +++ E
Sbjct: 338 LAKALDDMNAEGKLDKNLIWVVRRSGPEYVKGLKMLHE 375


>gi|156073288|gb|ABU46002.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
 gi|156073292|gb|ABU46004.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
          Length = 167

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 117/167 (70%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDENV 167


>gi|194333911|ref|YP_002015771.1| ATP-grasp domain-containing protein [Prosthecochloris aestuarii DSM
           271]
 gi|194311729|gb|ACF46124.1| ATP-grasp domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 399

 Score =  209 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 88/408 (21%), Positives = 160/408 (39%), Gaps = 53/408 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            I E  A     K+ +PV   VV+   +       A K L     VVK+    GGR K  
Sbjct: 3   KILEGSAMKFFNKWGIPVPNYVVVMDPNRLAQLGEANKWLRESKLVVKAHEAIGGRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      V++  +L+  +   RE++G  + T +       +  V V +  D   E 
Sbjct: 63  L----------VKLGLNLEEAVEASREMIGRKIGTAE-------IRQVIVAEMLDHDEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y+S+  +        + S++GG+DIE+        + ++ I      + E +  L     
Sbjct: 106 YVSIAGNPDGAE--LLLSSKGGVDIEDNW----DTVQRIHIPIDETPSLEALTDLATKAG 159

Query: 179 LQGQAR-IDGGDLFPNLYKAFCDKDMSLLEINPLIIMK-NGRLRVLDSKISFDDNALYRH 236
              Q        +   L   + ++D   +EINPL+I K + R   LD+ ++ D +A +RH
Sbjct: 160 FGDQEIAERVAKIASRLILCYDNEDAQSIEINPLVIRKSDMRFAALDAVMNVDWDARFRH 219

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIAL-----------DGNIGCMVNGAGLAMATMDI 285
            D  + + VSE      EA+Q  +   +             G +  +  G G ++   D 
Sbjct: 220 PD-WDFKPVSEIGRPFTEAEQQIMDIDSRIKGSVKFVEVPGGEVALLTAGGGASVFYADA 278

Query: 286 IKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGI 342
           +   GG+ AN+ +  G      V A  + +    ++K I++   G I     +     GI
Sbjct: 279 VVARGGSIANYAEYSGAPPDWAVEALTETLCQLPNIKHIIV--GGAIANFTDVKATFGGI 336

Query: 343 LSAVKEVKIN-----IPLVMRLEGANVDIGNR---LIAESGLNVITAI 382
           ++ ++E K N     + + +R  G N   G      + + G ++    
Sbjct: 337 INGLRESKANGYLDGVKIWVRRGGPNESEGLAAISKLKDEGFDIHVYD 384


>gi|85111717|ref|XP_964070.1| hypothetical protein NCU09810 [Neurospora crassa OR74A]
 gi|28925833|gb|EAA34834.1| hypothetical protein NCU09810 [Neurospora crassa OR74A]
          Length = 646

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 88/287 (30%), Positives = 143/287 (49%), Gaps = 14/287 (4%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++ +DR++   A + +     D  E A+     +     D   G     +  L   L+L
Sbjct: 363 LAVGIDRSARSPAILVAPSIE-DWMEGAQRTSAPVKSFPFDYRRGPDELAIERLASYLQL 421

Query: 180 Q---GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
                 A      L   L   F +K+  LL  +  I+ +   ++V+ ++ +FD  A +R+
Sbjct: 422 SNKGDSAVDSLRRLIETLATLFYEKEGLLLTTH--IVERLRGIKVVHARFAFD-QATFRN 478

Query: 237 L----DIQELRDVSEEDSREIEAKQHNLSYIALDGN---IGCMVNGAGLAMATMDIIKLY 289
                 I+ +   + ++  E +A++  + YI L G    IG +VNGAGLAM T+D +   
Sbjct: 479 GTPPDKIKAMYVCATDEPAEAKAERSGIVYIKLPGEDATIGTLVNGAGLAMNTVDALADA 538

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG  ANFLD GG A    V  +F II  D  V+ I +NIFGG+ R DV+  GI+ A KE+
Sbjct: 539 GGKAANFLDTGGKATSQTVKESFMIILQDPRVRVIFVNIFGGLTRGDVIAHGIIVAFKEL 598

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            + +P+V+R+ G N   G ++IA+S L +    D + AA K +   +
Sbjct: 599 SLTVPVVVRIRGTNETEGQKIIADSQLPLYAFDDFEVAAAKAIELSR 645


>gi|37288587|gb|AAQ90518.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1272]
 gi|37288589|gb|AAQ90519.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1273]
          Length = 167

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 93/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288509|gb|AAQ90479.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1131]
          Length = 167

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYRH DI ELRD+ EED +EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDVKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288605|gb|AAQ90527.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 546]
          Length = 167

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNIHIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
             G++  LD+K++FD NALYRH DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|308803324|ref|XP_003078975.1| succinyl CoA ligase beta subunit (ISS) [Ostreococcus tauri]
 gi|116057428|emb|CAL51855.1| succinyl CoA ligase beta subunit (ISS) [Ostreococcus tauri]
          Length = 261

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 103/167 (61%), Positives = 135/167 (80%)

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           DNA YR  +   LRD S+ED+RE++A + +L+YI LDGNIGCMVNGAGLAMATMDII+LY
Sbjct: 95  DNAEYRQRETFALRDHSQEDAREVQAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIIQLY 154

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
           GG+PANFLDVGG A +++V  AFKI+T+D  VK IL+NIFGGIM+CDV+  GI++A K+V
Sbjct: 155 GGSPANFLDVGGNASEEQVVEAFKILTADPKVKAILVNIFGGIMKCDVIAAGIVAAAKQV 214

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            + +PL++RLEG NV+ GN +++ S L +ITA DLDDAAQK   ++K
Sbjct: 215 DLRVPLIVRLEGTNVEAGNAILSSSDLTIITASDLDDAAQKACASLK 261


>gi|37288513|gb|AAQ90481.1| succinyl-CoA synthetase beta subunit [Bacillus cereus ATCC 14579]
 gi|37288519|gb|AAQ90484.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
 gi|37288565|gb|AAQ90507.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 889]
 gi|37288575|gb|AAQ90512.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1129]
 gi|37288577|gb|AAQ90513.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1132]
 gi|37288637|gb|AAQ90543.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 716]
 gi|37288639|gb|AAQ90544.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 718]
 gi|37288641|gb|AAQ90545.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 721]
 gi|37288643|gb|AAQ90546.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 726]
 gi|37288649|gb|AAQ90549.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 811]
 gi|37288657|gb|AAQ90553.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1293]
 gi|37288659|gb|AAQ90554.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1294]
 gi|57233305|gb|AAW48239.1| succinyl-CoA synthetase beta subunit [Bacillus cereus]
          Length = 167

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
             G++  LD+K++FD NALYRH DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|218458686|ref|ZP_03498777.1| succinyl-CoA synthetase subunit beta [Rhizobium etli Kim 5]
          Length = 194

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 109/172 (63%), Positives = 136/172 (79%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NIHEYQAKALL+ Y  PVA+GV +  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FKE
Sbjct: 1   NIHEYQAKALLKGYGAPVAEGVAVLKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFKE 60

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L  ++KGGVR+  S+  V++  +E+LG+TL+T QTG  G +VN +Y+EDGADI RELY S
Sbjct: 61  LSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYCS 120

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           LLVDR+ G VAF+ ST+GGMDIE VA D P+KI  + IDP  GVT+ DVA++
Sbjct: 121 LLVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPEAGVTAADVAAI 172


>gi|37288585|gb|AAQ90517.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1271]
 gi|37288599|gb|AAQ90524.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 519]
 gi|37288601|gb|AAQ90525.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 536]
 gi|37288603|gb|AAQ90526.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 542]
 gi|37288609|gb|AAQ90529.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 553]
 gi|37288611|gb|AAQ90530.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 572]
 gi|37288613|gb|AAQ90531.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 607]
 gi|37288645|gb|AAQ90547.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 727]
          Length = 167

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 117/167 (70%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRNKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|218904964|ref|YP_002452798.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           AH820]
 gi|218538744|gb|ACK91142.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
           AH820]
          Length = 169

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/159 (62%), Positives = 127/159 (79%)

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               ELRD+ EED++EIEA +++L+YI LDGNIGCMVNGAGLAMATMDIIK Y G PANF
Sbjct: 10  KTFLELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANF 69

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA  +KV  AFKII SD +VKGI +NIFGGIM+CDV+ +G++ A K+V + +PLV
Sbjct: 70  LDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLV 129

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +RLEG NV++G +++ ESGLN++ A  + D AQKIV  V
Sbjct: 130 VRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLV 168


>gi|37288571|gb|AAQ90510.1| succinyl-CoA synthetase beta subunit [Bacillus thuringiensis]
          Length = 167

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
             G++  LD+K++FD NALYRH DI ELRD+ EED++EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288583|gb|AAQ90516.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 1270]
          Length = 167

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 117/167 (70%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY+AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQTVKFMMGLYRAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRNKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288521|gb|AAQ90485.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 407]
 gi|37288523|gb|AAQ90486.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 632]
 gi|37288525|gb|AAQ90487.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 663]
 gi|37288579|gb|AAQ90514.1| succinyl-CoA synthetase beta subunit [Bacillus weihenstephanensis]
 gi|37288595|gb|AAQ90522.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 403]
 gi|37288597|gb|AAQ90523.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 408]
 gi|37288615|gb|AAQ90532.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 614]
 gi|37288617|gb|AAQ90533.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 627]
 gi|37288619|gb|AAQ90534.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 641]
 gi|37288621|gb|AAQ90535.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 645]
 gi|37288623|gb|AAQ90536.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 650]
 gi|37288625|gb|AAQ90537.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 664]
 gi|37288627|gb|AAQ90538.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 675]
 gi|37288629|gb|AAQ90539.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 676]
 gi|37288631|gb|AAQ90540.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 678]
 gi|37288633|gb|AAQ90541.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 681]
          Length = 167

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRNKDILELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288607|gb|AAQ90528.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 547]
          Length = 167

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLRGFQARRIAFNINIPKELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRNKDILELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  AFKII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNV 167


>gi|37288635|gb|AAQ90542.1| succinyl-CoA synthetase beta subunit [Bacillus sp. AH 685]
          Length = 167

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/167 (54%), Positives = 116/167 (69%)

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           FK  IDP +G+       +   + +  +           LY AF +KD S+ EINPL+  
Sbjct: 1   FKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTT 60

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN 274
            +G++  LD+K++FD NALYR+ DI ELRD+ EEDS+EIEA +++L+YI LDGNIGCMVN
Sbjct: 61  GDGKVMALDAKLNFDSNALYRNKDILELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVN 120

Query: 275 GAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
           GAGLAMATMDIIK Y G PANFLDVGGGA  +KV  A+KII SD +V
Sbjct: 121 GAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAYKIILSDKNV 167


>gi|296531478|gb|ADH29874.1| MIP20559p [Drosophila melanogaster]
          Length = 263

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 3/215 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ E+ + +LL +  +P  +  V  +   A      L     V+K+Q+ AGGRGKG FK
Sbjct: 34  LNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFK 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGVRV    ++      +++   L+TKQTG  G     V V +     RE Y 
Sbjct: 94  N---GLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREFYF 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +++++R       IAS +GG+DIEEVA   P  I    ID   G+TSE    +   + L 
Sbjct: 151 AVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKVGLG 210

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           G        +  NLY  F  KD  L+EINP     
Sbjct: 211 GDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDA 245


>gi|124515910|gb|EAY57419.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum rubarum]
          Length = 416

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 95/399 (23%), Positives = 163/399 (40%), Gaps = 50/399 (12%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHA-AESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M ++E++A   + +KY +P  + V  +  +      I+    P  V+KS +  G RGK  
Sbjct: 1   MKLYEHEALESIYKKYKIPAPRFVFATEPNEKVREFIEK--EPAVVIKSMVLVGKRGKAG 58

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++ +D    + V   L S      + +G+                  VE+  DI +E 
Sbjct: 59  AVKVVSDKAQAIDVFKDLASREVYGEKSIGA-----------------LVEEKLDIKKEF 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+         A I S  GGMD+EE+    P  I   +I  +  V    + +    + 
Sbjct: 102 YLSVTYSTKDRAPAIIFSEHGGMDVEEI---NPALIHTHVIKDVRSVYPYQIRNFLVGIG 158

Query: 179 LQGQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNALY 234
                      +L  N++ AF   +  LLEINPL++ + G   +L   D+ +  DD+A  
Sbjct: 159 FSDPDLLRPLSELIVNVFNAFWLTEARLLEINPLVVAQVGDKKKLVAADAVVLLDDDASV 218

Query: 235 R-------HLDIQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMD 284
                      +       E+D+  I+   H     SY+ LDG++  M  G G +  T +
Sbjct: 219 SPAVRYGARGGMGRPLTQREQDAILIDQGDHRGKAGSYVELDGDVALMTFGGGGSTVTAE 278

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL----VK 340
                G   AN  D+GG    +K+    +II S   +K +L+   GG      +     +
Sbjct: 279 TAIEAGLRIANLTDIGGNPPAEKMYKIARIILSKPGLKAVLV--CGGTASNTRIDVTLGE 336

Query: 341 GILSAVKEVK------INIPLVMRLEGANVDIGNRLIAE 373
           G+  A+ ++K       N+  V+R  G     G +++ E
Sbjct: 337 GLAKALDDMKAEGKLDPNLIWVVRRSGPEYVKGLKMLHE 375


>gi|206602154|gb|EDZ38636.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 416

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 95/399 (23%), Positives = 163/399 (40%), Gaps = 50/399 (12%)

Query: 1   MNIHEYQAKA-LLRKYNVPVAKGVVISSVHA-AESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M ++E++A   + +KY +P  + V  +  +      I+    P  V+KS +  G RGK  
Sbjct: 1   MKLYEHEALESIYKKYKIPAPRFVFATEPNEKVREFIEK--EPAVVIKSMVLVGKRGKAG 58

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++ +D    + V   L S      + +G+                  VE+  DI +E 
Sbjct: 59  AVKVVSDKAQAIDVFKDLASREVYGEKSIGA-----------------LVEEKLDIKKEF 101

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           YLS+         A I S  GGMD+EE+    P  I   +I  +  V    + +    + 
Sbjct: 102 YLSVTYSTKDRAPAIIFSEHGGMDVEEI---NPALIHTHVIKDVRSVYPYQIRNFLVGIG 158

Query: 179 LQGQ-ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNALY 234
                      +L  N++ AF   +  LLEINPL++ + G   +L   D+ +  DD+A  
Sbjct: 159 FSDPDLLRPLSELIVNVFHAFWLTEARLLEINPLVVAQVGDKKKLVAADAVVLLDDDASV 218

Query: 235 R-------HLDIQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMD 284
                      +       E+D+  I+   H     SY+ LDG++  M  G G +  T +
Sbjct: 219 SPAVRYGARGGMGRPLTQREQDAILIDQGDHRGKAGSYVELDGDVALMTFGGGGSTVTAE 278

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL----VK 340
                G   AN  D+GG    +K+    +II S   +K +L+   GG      +     +
Sbjct: 279 TAIEAGLRIANLTDIGGNPPAEKMYKIARIILSKPGLKAVLV--CGGTASNTRIDVTLGE 336

Query: 341 GILSAVKEVK------INIPLVMRLEGANVDIGNRLIAE 373
           G+  A+ ++K       N+  V+R  G     G +++ E
Sbjct: 337 GLAKALDDMKAEGKLDPNLIWVVRRSGPEYVKGLKMLHE 375


>gi|157104413|ref|XP_001648398.1| succinyl-coa synthetase beta chain [Aedes aegypti]
 gi|108880382|gb|EAT44607.1| succinyl-coa synthetase beta chain [Aedes aegypti]
          Length = 214

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 6/205 (2%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
            Y  F   + + +EINPL    +     G++  +D+K++FDDNA +   DI  +    + 
Sbjct: 6   CYYLFVKVEAAQIEINPLANRPDRNQSPGQVISVDAKLNFDDNAQFGQKDIFAMDVHEDT 65

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMA-TMDIIKLYGGAPANFLDVGGGADQDK 307
           D +EIE  ++NL+YIA++GNIGC+VNGA       MDIIKL    P NFLD GG A + +
Sbjct: 66  DPKEIEIHKYNLNYIAMEGNIGCLVNGAVWPWPPYMDIIKLNDEIPVNFLDEGGNAKEKQ 125

Query: 308 VAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
           V    +I+TSD +VK IL+NIFG I+    +  GI++A K + + +PLV+RL+G NVD  
Sbjct: 126 VLKTLQILTSDPNVKAILVNIFGEIVNFTTIADGIVNATKTIGLKVPLVVRLKGTNVDAA 185

Query: 368 NRLIAESGLNVITAIDLDDAAQKIV 392
            +++ ESGL + +  +L++AA+K V
Sbjct: 186 KKILEESGLMIESVHELEEAAKKTV 210


>gi|324533349|gb|ADY49301.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 183

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/171 (53%), Positives = 131/171 (76%), Gaps = 2/171 (1%)

Query: 218 RLRVLDSKISFDDNALYRHLDIQELRDVS--EEDSREIEAKQHNLSYIALDGNIGCMVNG 275
           +   +D+K++FDDNA +R  +I  + + S  E ++REI A +HNL+YIAL+G+IGCMVNG
Sbjct: 2   QAYCIDAKLNFDDNAYFRQKEIFAMEEASGSEANAREILASEHNLNYIALEGDIGCMVNG 61

Query: 276 AGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
           AGLAMATMDIIKL+GG+PANFLDVGG   ++ V AAFKIITSD  VK IL+NIFGGI+ C
Sbjct: 62  AGLAMATMDIIKLHGGSPANFLDVGGTVSEEAVCAAFKIITSDPQVKAILVNIFGGIVSC 121

Query: 336 DVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            V+  G+++A K++++ +PL++RLEG        ++  SGL +ITA+++D+
Sbjct: 122 LVIANGLVAACKKIELKVPLIIRLEGTKAVEAREVLKASGLPLITAVNMDE 172


>gi|294930372|ref|XP_002779544.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239888857|gb|EER11339.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 237

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 6/223 (2%)

Query: 1   MNIHEYQAKALLR-KYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           ++ HEYQ+  LL  +++V  V K     + +  E   + L G   VVK+Q+  GGRG+G 
Sbjct: 19  LHFHEYQSMNLLHHQFHVDAVPKCFYARNSNEVEDYARRLGGGDVVVKAQVLGGGRGRGH 78

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FKE     +GGV + SS         ++L  +L+T+QTG +G     V + +   I+ E 
Sbjct: 79  FKE--NGFQGGVHIASSPSEARIVAEQMLNKSLVTRQTGLSGRTCKGVLLCEKLPIVAEK 136

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++++DR  G    + S  GGM IEEVA ++P  + K+ ID   G+T+       + L 
Sbjct: 137 YFAIMLDRGLGGPVMVMSKHGGMSIEEVAIEHPDAVTKIPIDVTTGLTTRQAEEAVEHLG 196

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
             G            LY+ F   D ++LE+NPL  +++GR+ V
Sbjct: 197 FNGD--PSAMATLKGLYRTFVGADCTMLEVNPLAELEDGRIMV 237


>gi|307103466|gb|EFN51726.1| hypothetical protein CHLNCDRAFT_139908 [Chlorella variabilis]
          Length = 310

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/203 (42%), Positives = 123/203 (60%), Gaps = 34/203 (16%)

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELR 243
           +    +    LY+ F +KD +++E+NPL    +  L   D+K+ FDDNA +R  ++  +R
Sbjct: 132 KAAAAEQIKGLYRLFVEKDCTMVEVNPLAET-DTALVAADAKLGFDDNAAFRQPELFAMR 190

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA 303
           D S+ED RE+ A +++L+YI LDG+IGCMVNGA              GAPANFLD     
Sbjct: 191 DESQEDPREVAAAKYDLNYIGLDGSIGCMVNGAAAR-----------GAPANFLD----- 234

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                            VK IL+NIFGGIMRCDV+  GI++A K+V + +PL++RLEG N
Sbjct: 235 -----------------VKAILVNIFGGIMRCDVIASGIVNAAKQVGVQVPLIVRLEGTN 277

Query: 364 VDIGNRLIAESGLNVITAIDLDD 386
           V+ G  ++A SG+N+I+  DLDD
Sbjct: 278 VERGKEILAGSGMNLISGSDLDD 300



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +N+HEYQ   ++ +Y + V  G+ +  V     A + +       VVKSQI AGGRG G+
Sbjct: 26  LNVHEYQGAQIMSQYGINVPPGIPVHKVEEVGPAAQKMADENGEVVVKSQILAGGRGLGK 85

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP--TGSRVNCVYVEDGADIL 115
           F       +GGV +        S   ++LG TL   +  P   G +V          I 
Sbjct: 86  F---TNGLQGGVHICK-ASEAPSLAAKMLGGTLSGAKGKPMVEGLKVTTDKAAAAEQIK 140


>gi|320593459|gb|EFX05868.1| succinyl-synthetase subunit [Grosmannia clavigera kw1407]
          Length = 707

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/302 (28%), Positives = 141/302 (46%), Gaps = 21/302 (6%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA-KDYPQKIFKLLIDPL 162
           + V   + +      YL++ VDR++     +A+     D   VA K +P       ID L
Sbjct: 400 HGVNAAEYSGHGVRRYLAITVDRSARSPCVLAAPDFDCDRSTVALKRFPFAYGPSGIDGL 459

Query: 163 IGVTSEDVASLCDMLELQGQA--RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
           +      V  +   L L   A       DL   LY  F  ++  L+E    ++ +  +L+
Sbjct: 460 L------VERVAAHLGLSLHAGSVEALRDLLRALYDVFVGQEAFLVETA--VVQRLAQLK 511

Query: 221 VLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL-------DGNIGCMV 273
           V+ +++  DD  +      +     +  +  E  AK++ + YI L         +I  +V
Sbjct: 512 VVGARLGLDDAGVGAR---EATATTTIAEPDEAAAKENGIVYIKLGQSDAAEPAHIATLV 568

Query: 274 NGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIM 333
           NGAGLAM T+D +   GG   NFLD GG A  + V   F ++  D  V+ IL+N+FGG+ 
Sbjct: 569 NGAGLAMNTVDALAGLGGRATNFLDTGGKATSETVRVCFDVLLRDPRVRVILVNVFGGLT 628

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
             D++ +G+L A +E  + +P+V+R+ G N   G  +I ESGL +       +AA K V 
Sbjct: 629 LGDMIARGVLLAFRETCVTVPVVVRIRGTNEAEGQCIIRESGLPLFAFDSFQEAAAKAVE 688

Query: 394 AV 395
             
Sbjct: 689 LA 690


>gi|115489130|ref|NP_001067052.1| Os12g0566300 [Oryza sativa Japonica Group]
 gi|77556190|gb|ABA98986.1| ATP-citrate synthase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649559|dbj|BAF30071.1| Os12g0566300 [Oryza sativa Japonica Group]
 gi|215678666|dbj|BAG92321.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215692808|dbj|BAG88252.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 423

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 164/420 (39%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LLR++       ++ +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELVNQEPWLSSMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVRQFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTVFLPTEKAMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   GD    +Y  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--VRTKIGDFIRGVYSVFQDLDFSFLEMNPFTMV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQHN---LSYIALDGNIGCMVNGAGLA 279
            +++               +   SE    E++ K  +    + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A++E +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVY 402


>gi|302849248|ref|XP_002956154.1| hypothetical protein VOLCADRAFT_97107 [Volvox carteri f.
           nagariensis]
 gi|300258457|gb|EFJ42693.1| hypothetical protein VOLCADRAFT_97107 [Volvox carteri f.
           nagariensis]
          Length = 448

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 91/422 (21%), Positives = 153/422 (36%), Gaps = 55/422 (13%)

Query: 2   NIHEYQAKALLRKY-------NVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            I EY AK LL+ +       ++P+   +    S+     +    L     VVK  +  G
Sbjct: 5   KIREYDAKRLLKAHIKRLAGLDLPIQVVQFTAASNPSDLLNENPWLGNTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADS-KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
            RGK     L  D  +       S    I    + L  T+           +    +E  
Sbjct: 65  QRGKNDLVGLNLDFSQASTMCFPSAIWAIDFATQRLNRTVTVNGCTG---PITTFLIEPF 121

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YLS+   R    V+F  S  GG+ IEE       K+  +++D       +   
Sbjct: 122 VAHEEEFYLSITSTRNGWEVSF--SEAGGIHIEENW----DKLRTVVLD-TTDCPLDSAR 174

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
               +  L  + +          +  F D D +LLE+NP  +  +G+   LD ++  DD 
Sbjct: 175 VAPLIAGLPLELKPALERFILAAFAVFNDLDCTLLEMNPWTLDASGQPFPLDMRVELDDT 234

Query: 232 ALYRHLDIQELRDVSEEDSREI---------------EAKQHNLSYIALD--GNIGCMVN 274
           + YR+     + DV  E                    EA   +L +  L+  G +  MV 
Sbjct: 235 SKYRNGPKWNVGDVELEFPLPFGRLLTPAEEAVSALDEATGASLKFTVLNPAGRVWLMVA 294

Query: 275 GAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINI 328
           G G ++   D I   G A    N+ +  G  +  +     + +     + +  +G ++ I
Sbjct: 295 GGGASVIYTDTIADLGFAQELGNYGEYSGAPNTSETYQYARTVLDCATAHADGRGRVLLI 354

Query: 329 FGGIMRCDVLV---KGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIA----ESGL 376
            GGI     +     GI+ A+KE K       + + +R  G N   G  L+     E G+
Sbjct: 355 GGGIANFTDVAATFTGIIQALKEKKAALQAAKVRIFVRRGGPNYQKGLALMRSLGDELGV 414

Query: 377 NV 378
            +
Sbjct: 415 PI 416


>gi|226490944|ref|NP_001141736.1| hypothetical protein LOC100273868 [Zea mays]
 gi|194705748|gb|ACF86958.1| unknown [Zea mays]
          Length = 423

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/435 (22%), Positives = 170/435 (39%), Gaps = 65/435 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LLR++      +   +    +  S   AE   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAGIDLTILSAQITQSTDFAELVSQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D             V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGLVALNLDF----------NQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +TS+  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTSDSCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+  AR   GD    ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--ARGKIGDFIKGVFAVFLDLDFSFLEMNPFTMV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E    E++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGGIEFPLPFGRVLSPTESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLNYSRVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIG----NRLIAESGLNVI-- 379
               +     GI+ A++E +  +      + +R  G N   G     +L AE G+ +   
Sbjct: 343 NFTDVATTFNGIIRALREKESKLKASRMHIYVRRGGPNYQSGLAKMRKLGAELGVPIEVY 402

Query: 380 -TAIDLDDAAQKIVH 393
                +    ++ + 
Sbjct: 403 GPEATMTGICKQAIE 417


>gi|242069493|ref|XP_002450023.1| hypothetical protein SORBIDRAFT_05g027180 [Sorghum bicolor]
 gi|241935866|gb|EES09011.1| hypothetical protein SORBIDRAFT_05g027180 [Sorghum bicolor]
          Length = 423

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/435 (22%), Positives = 169/435 (38%), Gaps = 65/435 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LLR++      +   +    +  S   AE   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAGIDLTILSAQITQSTDFAELVSQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D             V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGLVALNLDF----------DQVKEFVKERLG---VEIEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTPDSCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+  AR   GD    ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--ARGKIGDFIKGVFAVFQDLDFSFLEMNPFTMV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E    E++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGDIEFPLPFGRVLSSTESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLNYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIG----NRLIAESGLNVI-- 379
               +     GI+ A++E +  +      + +R  G N   G     +L AE G+ +   
Sbjct: 343 NFTDVAATFNGIIRALREKESKLKASRMHIYVRRGGPNYQSGLAKMRKLGAELGVPIEVY 402

Query: 380 -TAIDLDDAAQKIVH 393
                +    ++ + 
Sbjct: 403 GPEETMTGICKQAIE 417


>gi|226507592|ref|NP_001149325.1| LOC100282948 [Zea mays]
 gi|195626414|gb|ACG35037.1| ATP-citrate synthase [Zea mays]
          Length = 422

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 162/420 (38%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LLR++      +   +    V  S    E A +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAGIDLQILSAQVTQSTDFTELANQEPWLSSMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVRQFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGNTISF--SECGGIEIEENW----DKVKTIFLPTEKQMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   G     ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--VRTKIGGFIRAVFSVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++ +             +   SE    E++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFNKWGNIVFPLPFGRVLSPSESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++V    +++     SD   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPKEEEVLQYARVLLDCATSDPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A++E +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVASTFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVY 402


>gi|16329536|ref|NP_440264.1| succinate--CoA ligase [Synechocystis sp. PCC 6803]
 gi|1652018|dbj|BAA16944.1| succinate--CoA ligase [Synechocystis sp. PCC 6803]
          Length = 401

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 78/330 (23%), Positives = 135/330 (40%), Gaps = 37/330 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP-LYVVKSQIHAGGRGKGRF 59
           M++ EYQAK L ++  +P+     I +     +A+K L  P   V+KSQ+ AGGRGK   
Sbjct: 1   MDLLEYQAKELFQQVGIPILPSQTIQNT----TALKRLQIPYPMVLKSQVRAGGRGKAGG 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                ++   +   S                               +  E   D   EL+
Sbjct: 57  VRFVENTIDAIAAAS-----------------AIFHLPIADEYPEVILAEARYDAQSELF 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++++D        + S++GG+D+E + +          +      +      L   + L
Sbjct: 100 LAIVLDYQRQCPVLMGSSEGGIDVETLLEQMQ------SVSLRTNFSPYLARRLAVKMGL 153

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
            G        +   +Y+ F   D+ ++EINPL I  +G +  LD KI+ +D A+ RH D+
Sbjct: 154 TGPLVTAVSGIIGKMYELFVTYDLDVIEINPLGISADGEVMALDGKITVNDTAINRHPDL 213

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
              R         +             G IG + N  GLA++T D++  +G   A  LD 
Sbjct: 214 INWRSEQWTGHSWLPGNLA-------QGQIGLICNSEGLALSTWDLLNSFGITGAYLLDE 266

Query: 300 GGGADQ--DKVAAAFKIITSDSSVKGILIN 327
           G       +++  AF  ++   ++KGI +N
Sbjct: 267 GRSDITLGEQLELAFNHLSQAPNLKGIFVN 296


>gi|242083824|ref|XP_002442337.1| hypothetical protein SORBIDRAFT_08g018480 [Sorghum bicolor]
 gi|241943030|gb|EES16175.1| hypothetical protein SORBIDRAFT_08g018480 [Sorghum bicolor]
          Length = 422

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 162/420 (38%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LLR++      +   +    V  S    E A +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHLKRLAGIDLQILSAQVTQSTDFTELANQEPWLSSMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVRQFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLPTEKQMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   G     ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--VRTKIGGFIRGVFSVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++ +             +   SE    E++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFNKWGDIEFPLPFGRVLSPSESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPKEEEVLQYARVLLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A++E +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLGTELGVPIEVY 402


>gi|147775765|emb|CAN64797.1| hypothetical protein VITISV_017316 [Vitis vinifera]
          Length = 423

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 161/420 (38%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      +   +    V  +   AE   K   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLVGIDLQICSAQVTEATDFAELTNKEPWLSSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++  LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVAEFVKARLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTINLPTEKPMTPETCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   GD    ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--VRGKIGDFIKGVFAVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKTWGNIEFPLPFGRVLSPTEGYIHLLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A+KE +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIIRALKEKESKLKASRMHIYVRRGGPNYQTGLARMRALGEELGIPLEVY 402


>gi|70921230|ref|XP_733977.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506277|emb|CAH89244.1| hypothetical protein PC000082.04.0 [Plasmodium chabaudi chabaudi]
          Length = 207

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 66/171 (38%), Positives = 107/171 (62%)

Query: 93  TKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ 152
           TKQTGP G + N V++ +   I +E Y++ L+DR S  +  + S+ GG  IE+++K  P+
Sbjct: 1   TKQTGPEGKKCNTVFICERFYIRKERYVAFLLDRNSDNICLLGSSVGGSSIEDISKKTPE 60

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI 212
            I+K+ I+   G+T+      C+ +  +G       D+  NLYK F   D +LLEINPL 
Sbjct: 61  AIYKININIKDGLTNGQSREFCEQIGFKGNELDIATDMLVNLYKIFKKYDCTLLEINPLS 120

Query: 213 IMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
              +GR+   D+K++FDDNA YR  +I + RD+++E+  E+EAK++NL+Y+
Sbjct: 121 ETNDGRVLCCDAKLNFDDNAEYRQKEIFDKRDLTQENPEELEAKKYNLNYV 171


>gi|67925570|ref|ZP_00518900.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp
           [Crocosphaera watsonii WH 8501]
 gi|67852589|gb|EAM48018.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp
           [Crocosphaera watsonii WH 8501]
          Length = 418

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 87/445 (19%), Positives = 169/445 (37%), Gaps = 85/445 (19%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M++ EYQAK L  +  +PV     I+ +   +     +P P+ V+KSQ+H+         
Sbjct: 1   MDLLEYQAKELFHQVGIPVLPSQPIAKLSELKH--LHIPYPV-VLKSQVHS--------- 48

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG+R   +    ++  + I    ++ +           +  E   D   E +L
Sbjct: 49  -GGRGRAGGIRFVQNTIDAVAAAQAIFSLPILKE-------YPEVILAEARYDAQEEFFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+++D        + S +GG+D+E + K   + +         G +      L   + LQ
Sbjct: 101 SIVLDYQLQRPVLMGSAKGGIDVETLLKHTQKVVLHQ------GFSPFYARRLATKMGLQ 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G+       +   +Y+ F +KD+ L+EINPL +  +G    LD KI+ +D AL RHLD+ 
Sbjct: 155 GRLIHGVSIILEKMYQLFIEKDLDLVEINPLAVSSSGEFMALDGKITVNDMALSRHLDLL 214

Query: 241 ELRDVS-----------------EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
                                   +    + A++   +   +        NG GL +++ 
Sbjct: 215 SFLKPRVDQPSSQTPQATIVTTPPQKPCWLPAREKGGNIGLI-------GNGFGLTLSSW 267

Query: 284 DIIKLYGGAP-ANFLDVGGGADQDKVAA---AFKIITSDSSVKGILINIFGGIMRCDVLV 339
           D++    G     F+     + +  +     A + + +   +K I INI       +++ 
Sbjct: 268 DLMLEQKGEILGAFVIEEKSSSKSLIKQLGIAIEKMLTVPDIKVIFINIVTKHQTSELVA 327

Query: 340 KGILSAVK--------EVKINIP---------------------LVMRLEGANVDIGNRL 370
           + +L   +        E ++  P                      V+RL   ++      
Sbjct: 328 QALLDYCQPLVVTSGSEERLPRPTGSNSTRQRPITPSPMENPIEWVIRLPVDDLQPIEE- 386

Query: 371 IAESGLNVITAIDLDDAAQKIVHAV 395
            + SGL+V    ++ +A +K V   
Sbjct: 387 -SFSGLSVNCFKEMMEAVKKTVALS 410


>gi|108864675|gb|ABA95548.2| ATP-citrate synthase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|218186206|gb|EEC68633.1| hypothetical protein OsI_37024 [Oryza sativa Indica Group]
          Length = 423

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/437 (21%), Positives = 171/437 (39%), Gaps = 65/437 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   +  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+  AR   GD    ++  F D D S LE+NP  I+ NG    LD +   DD A
Sbjct: 166 LIATLPLE--ARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E    +++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVL---VKGILSAVKEVKINIP-----LVMRLEGANVDIG----NRLIAESGLNVI-- 379
               +     GI+ A++E +  +      + +R  G N   G     +L AE G+ +   
Sbjct: 343 NFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVY 402

Query: 380 -TAIDLDDAAQKIVHAV 395
                +    ++ +  V
Sbjct: 403 GPEATMTGICKQAIECV 419


>gi|225450474|ref|XP_002280514.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296089834|emb|CBI39653.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 159/420 (37%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+ +      +   +    V  +   AE   K   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKDHLKRLAGIDLQICSAQVTEATDFAELTNKEPWLSSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++  LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVAEFVKARLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTINLPTEKPMTPETCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   GD     +  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--VRGKIGDFIKGAFAVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKTWGNIEFPLPFGRVLSPTEGYIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A+KE +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIVRALKEKESKLKASRMHIYVRRGGPNYQTGLARMRALGEELGIPLEVY 402


>gi|326507652|dbj|BAK03219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 423

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 161/420 (38%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      +   +    V  S    E + +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELSNQEPWLSSMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVRQFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTLDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   GD     +  F D D S +E+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--VRTKIGDFIRGSFSVFQDLDFSFMEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   SE    E++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVLSPSESYIHELDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++V    +++     +D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKIN-----IPLVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A++E +       + + +R  G N   G   +     E GL +   
Sbjct: 343 NFTDVAATFSGIIRALREKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVY 402


>gi|15919089|emb|CAC86996.1| ATP citrate lyase b-subunit [Lupinus albus]
          Length = 423

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 90/413 (21%), Positives = 167/413 (40%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++P+    V  +      +     L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHYKRLSGNDLPIKSAQVTETTDFTELQEKEPWLSSSKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V S ++E LG+ +  + +G  G  +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVASFVKERLGNEV--EMSGCKG-PITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ DR    ++F  S  GG++IEE       K+  + +   + +TSE +A 
Sbjct: 112 PHNEEFYLNIVSDRLGNSISF--SECGGIEIEENW----DKVKTVFVPTGVSLTSEIIAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   + +  +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGEIEEFLKVIFNLFQDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +D+V    +++    T++   +   + + GGI 
Sbjct: 283 VIYADTVGDLGFANELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQKRALVVGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A+KE +  +      + +R  G N   G   + E G  +
Sbjct: 343 NFTDVAATFSGIIRALKEKESKLKAARMHIYVRRGGPNYQKGLAKMRELGEEI 395


>gi|205373358|ref|ZP_03226162.1| succinyl-CoA synthetase subunit beta [Bacillus coahuilensis m4-4]
          Length = 145

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/154 (49%), Positives = 97/154 (62%), Gaps = 10/154 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQ K LLRK+ V V  G V  +V  A  A K L   +YVVK+QIHAGGRGK    
Sbjct: 1   MNIHEYQGKELLRKHGVAVPNGTVAYTVEEAVEAAKGLDSNVYVVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V +   EILG TL+T QTGP G  V  + +E+G DI +E Y+
Sbjct: 58  -------GGVKVAKSLDEVRTYSEEILGKTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
            L++DR +  V  +AS +GG +IEEVA++ P+KI
Sbjct: 111 GLVLDRATSQVVLMASEEGGTEIEEVAEETPEKI 144


>gi|224102459|ref|XP_002312686.1| predicted protein [Populus trichocarpa]
 gi|222852506|gb|EEE90053.1| predicted protein [Populus trichocarpa]
          Length = 423

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/435 (20%), Positives = 165/435 (37%), Gaps = 65/435 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++P+    V  S            L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRLSGRDLPIKSAQVTESTDFNELAEKEPWLSSAKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   +++ LG  +   + G     +    +E   
Sbjct: 65  KRGKSGL----------VALNLDLDQVADFVQQRLGKEV---EMGGCKGPITTFIIEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YL+++ +R    ++F  S  GG++IEE       K+  + +      TSE  A 
Sbjct: 112 PHDQEFYLNIVSERLGCSISF--SECGGIEIEENW----DKVKTIFVPTGATFTSEVCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   + L+   + +  +   + +  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATIPLE--IKGEIEEFIQSAFALFQDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQH-------------NLSYIALDGNIGCMVNGAGLA 279
            +++       +      R + + +                + +  +G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPMPFGRVMSSTESFVHGLDEKTSASLKFTVLNPEGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++D+V    +++    TSD       + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEDEVLQYARVVIDCATSDPDGHKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVI-- 379
               +     GI+ A+KE +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIIRALKEKESKLKAARMNIYVRRGGPNYQRGLAKMRALGEEIGIPIEVY 402

Query: 380 -TAIDLDDAAQKIVH 393
                +    ++ + 
Sbjct: 403 GPEATMTGICKQAIE 417


>gi|255568854|ref|XP_002525398.1| ATP-citrate synthase, putative [Ricinus communis]
 gi|223535361|gb|EEF37036.1| ATP-citrate synthase, putative [Ricinus communis]
          Length = 423

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 89/420 (21%), Positives = 159/420 (37%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRK-------YNVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL++       Y +P+    V  S            L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRLSGYELPIKSAQVTESTDFNELAEKEPWLSSGKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++E LG  +   + G     +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAEVAIFVKERLGKEV---EMGGCKGPITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IEE       K+  + +      TSE  A 
Sbjct: 112 PHNEEFYLNMVSERLGCSISF--SECGGIEIEENW----DKVKTIFVPTGASFTSEVCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   + +       ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGELEQFIKVVFALFQDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 TFKNFKKWGDIEFPMPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    TS+   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDYATSNPDGRKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A++E +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIIRALREKESKLKAARMQIFVRRGGPNYQRGLAKMRILGEEIGIPIEVY 402


>gi|297837407|ref|XP_002886585.1| ATP-citrate lyase A-2 [Arabidopsis lyrata subsp. lyrata]
 gi|297332426|gb|EFH62844.1| ATP-citrate lyase A-2 [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 93/414 (22%), Positives = 163/414 (39%), Gaps = 60/414 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
            I EY +K LL+++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5   KIREYDSKRLLKEHFKRLSGQELPI-RSVQINQETDLNELVEKEPWLSSEKLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK     L  D             V + ++E LG  +  + +G  G  +    VE  
Sbjct: 64  GKRGKSGLVALKLDF----------ADVATFVKERLGKEV--EMSGCKG-PITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ DR    ++F  S  GG+DIEE       K+  + I     +T E  A
Sbjct: 111 VPHNEEFYLNIVSDRLGCSISF--SECGGIDIEENW----DKVKTITIPTGASLTPEICA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+   + +  D    ++  F D D + LE+NP  ++ +G+   LD +   DD 
Sbjct: 165 PLVATLPLE--IKGELEDFIQVIFTLFEDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDT 221

Query: 232 ALYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           A +++               +   +E     ++ K       + +   G I  MV G G 
Sbjct: 222 AAFKNFKKWGDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G   +D+V    +++    T++   K   + I GGI
Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341

Query: 333 MRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A+KE +  +      + +R  G N   G   +   G  +
Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEI 395


>gi|170077513|ref|YP_001734151.1| succinate-CoA ligase beta chain [Synechococcus sp. PCC 7002]
 gi|169885182|gb|ACA98895.1| succinate-CoA ligase beta chain [Synechococcus sp. PCC 7002]
          Length = 388

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 135/336 (40%), Gaps = 35/336 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + EYQAK L  +  +P     +I+     +     +P P+ V+KSQ+          +
Sbjct: 1   MELLEYQAKQLFEQVGIPTLPSQIIADPRELKQ--LQIPYPI-VLKSQV----------R 47

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GG++   +    I+  R I    +        G   + +  E   +  +E++L
Sbjct: 48  AGGRGKAGGIKRVQNTIDAIAAARNIFNLAI-------AGQYPDVLLAEAHYERKQEIFL 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++++D        + S  GGM+I+++  +  Q + K    P           L + + ++
Sbjct: 101 AVVLDYELQRPVLLGSAHGGMEIDQLLANLHQVVIKDFFSP------FQARHLLNKMGIR 154

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           G       D+   +Y     KD+ L+EINPL I + G L  LD K++  D AL +H +I 
Sbjct: 155 GALVPALSDIIKKMYDLLLAKDLELVEINPLGINQAGELMALDGKVTVHDTALRKHPEIA 214

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
              +   + S   EA   +  +    G +G +  G G A    D++    G PA    +G
Sbjct: 215 LFYEHQNQLSFTPEAAPLSWQHDVQGGAVGIVCYGVGAAAVIWDMLHDLKGHPACCWLLG 274

Query: 301 GGA-----DQDKVAAAFKIITSD----SSVKGILIN 327
             A         +    +II         +K +L+N
Sbjct: 275 PRAQGRVFSPYDLDEQIEIILEQLAALPQIKVVLLN 310


>gi|119617915|gb|EAW97509.1| hCG1791842, isoform CRA_b [Homo sapiens]
          Length = 293

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 3/195 (1%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E Q+K L+    V V +  V  + + A  A K L     V+K+QI AGGRGKG F 
Sbjct: 34  LSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVF- 92

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  K GV +      V    ++++G  L TKQT   G +VN V V +  DI RE YL
Sbjct: 93  --NSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYL 150

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L+D++      + S Q G+DIEEVA   P+ IFK  ID   G+       + + L   
Sbjct: 151 AILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFV 210

Query: 181 GQARIDGGDLFPNLY 195
           G  +     +  N++
Sbjct: 211 GPLKSQVEAILVNIF 225



 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           S V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+ LEG NV     ++  S L +
Sbjct: 215 SQVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPI 273

Query: 379 ITAIDLDD 386
            +A+DL+D
Sbjct: 274 TSAVDLED 281


>gi|312797177|ref|YP_004030099.1| succinyl-CoA synthetase beta chain [Burkholderia rhizoxinica HKI
           454]
 gi|312168952|emb|CBW75955.1| Succinyl-CoA synthetase beta chain (EC 6.2.1.5) [Burkholderia
           rhizoxinica HKI 454]
          Length = 200

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 10/157 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M IHEYQ K +LRK+ V V +G    SV  A    + L G ++VVK+QIHA         
Sbjct: 1   MKIHEYQGKEILRKFGVTVPRGKPAFSVDEAVKVAEELGGSVWVVKAQIHA--------- 51

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V  SL  V     +ILG  L T QTGP G +VN + +E+GADI +ELY+
Sbjct: 52  -GGRGKGGGVKVAKSLDQVREYSNQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYV 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
            L+VDR S  V  +AS++GGMDIEEVA   P+ I +L
Sbjct: 111 GLVVDRISQKVVLMASSEGGMDIEEVAAKTPELIIRL 147


>gi|297843736|ref|XP_002889749.1| ATP-citrate lyase A-3 [Arabidopsis lyrata subsp. lyrata]
 gi|297335591|gb|EFH66008.1| ATP-citrate lyase A-3 [Arabidopsis lyrata subsp. lyrata]
          Length = 424

 Score =  185 bits (471), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 88/410 (21%), Positives = 160/410 (39%), Gaps = 58/410 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V ++  L  V + ++  LG+ +  +        +    VE   
Sbjct: 65  KRGKSGL----------VALKLDLAEVAAFVKARLGTEVEMEGCKA---PITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTIFLPAEKSMTLEVCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   G+     +  F D D S +E+NP  ++ +G    LD +   DD A
Sbjct: 166 LIATLPLE--VRAKIGNFIMGAFAVFQDLDFSFMEMNPFTLV-DGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++ +             +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFNKWGDIEFPLPFGRVLSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESG 375
               +     GI+ A++E +  +      + +R  G N   G   +   G
Sbjct: 343 NFTDVAATFNGIIRALREKETRLKASRMHIYVRRGGPNYQTGLARMRALG 392


>gi|15217510|ref|NP_172414.1| ACLA-3; ATP citrate synthase [Arabidopsis thaliana]
 gi|3482918|gb|AAC33203.1| Similar to ATP-citrate-lyase [Arabidopsis thaliana]
 gi|22022573|gb|AAM83243.1| At1g09430/F19J9_9 [Arabidopsis thaliana]
 gi|27764922|gb|AAO23582.1| At1g09430/F19J9_9 [Arabidopsis thaliana]
 gi|332190321|gb|AEE28442.1| ATP-citrate lyase A-3 [Arabidopsis thaliana]
          Length = 424

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 88/410 (21%), Positives = 159/410 (38%), Gaps = 58/410 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V ++  L  V   ++  LG+ +  +        +    VE   
Sbjct: 65  KRGKSGL----------VALKLDLAEVADFVKARLGTEVEMEGCKA---PITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ DR    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEYYLSIVSDRLGCTISF--SECGGIEIEENW----DKVKTIFLPAEKSMTLEVCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   G+     +  F D D S +E+NP  ++ +G    LD +   DD A
Sbjct: 166 LIATLPLE--VRAKIGNFIMGAFAVFQDLDFSFMEMNPFTLV-DGEPFPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++ +             +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFNKWGDIEFPLPFGRVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESG 375
               +     GI+ A++E +  +      + +R  G N   G   +   G
Sbjct: 343 NFTDVAATFNGIIRALREKETRLKASRMHIYVRRGGPNYQTGLARMRALG 392


>gi|224124562|ref|XP_002330054.1| predicted protein [Populus trichocarpa]
 gi|222871479|gb|EEF08610.1| predicted protein [Populus trichocarpa]
          Length = 423

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/420 (22%), Positives = 163/420 (38%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      +   +    V       E   K   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLSGIDLQICSAQVTEGTDFTELTNKEPWLSSTKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++  LG+ +   + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVAEFVKARLGAEV---EMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E Y+S++ +R    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEFYISIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTLEACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   GD   +++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--IRGKIGDFIISVFSVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRDV----------SEEDSREIEAKQHN---LSYIALDGNIGCMVNGAGLA 279
            +++       +           +E     ++ K  +    + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNVEFPLPFGRVLSSTESFIHSLDEKTSSSLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++D+V    +++    TSD   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEDEVLQYARVVIDCATSDPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +     GI+ A++E +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRTLGEELGVPLEVY 402


>gi|255543008|ref|XP_002512567.1| ATP-citrate synthase, putative [Ricinus communis]
 gi|223548528|gb|EEF50019.1| ATP-citrate synthase, putative [Ricinus communis]
          Length = 423

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/413 (21%), Positives = 157/413 (38%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGLDIQICSAQVTESTDFTELTNQEPWLSSSRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++  LG   +  +     + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVAEFVKARLG---VEVEMSGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +  E  A 
Sbjct: 112 PHDQEFYLSIVSERLGCTISF--SECGGIEIEENW----DKVKTVFLPTEKPMNLEACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R   G     ++  F D D S +E+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--IRGKIGAFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVLSPTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A++E +  +      + +R  G N   G   +   G  V
Sbjct: 343 NFTDVAATFNGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRTLGEEV 395


>gi|270684422|ref|ZP_06222810.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
 gi|270316240|gb|EFA28194.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
          Length = 165

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 95/151 (62%), Positives = 126/151 (83%)

Query: 218 RLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAG 277
            L  LD+KIS DDNAL+RH D+  L+D+++ D+RE EA++  L+Y+AL+G+IGCMVNGAG
Sbjct: 15  NLVCLDAKISVDDNALFRHKDLLALQDLTQNDAREAEAEKFQLNYVALEGDIGCMVNGAG 74

Query: 278 LAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDV 337
           LAM TMDI+KLYGG PANFLDVGGGA Q++VA AFKII +D SVK IL+NIFGGI+RCD+
Sbjct: 75  LAMGTMDIVKLYGGKPANFLDVGGGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDL 134

Query: 338 LVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
           + +G+++AV EV + +P+V+RLEG N +IG 
Sbjct: 135 IAEGVIAAVNEVGVRVPVVVRLEGTNAEIGR 165


>gi|147832628|emb|CAN70448.1| hypothetical protein VITISV_017947 [Vitis vinifera]
          Length = 423

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 87/413 (21%), Positives = 158/413 (38%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++P+    +  S            L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRXSGTDLPIKSAQITESTDFNELAEKEPWLXSGKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V + ++E LG  +   + G     +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVXTFVKERLGKEV---EMGGCRGPITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IEE       K+  + I      TSE  A 
Sbjct: 112 PHNEEFYLNMVSERLGXSISF--SECGGIEIEENW----DKVKTIFIPTGATFTSEICAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   +    +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGKIEEFIKVVFALFVDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T++       + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A+KE +  +      + +R  G N   G   +   G  +
Sbjct: 343 NFTDVAATFNGIIRALKEKESKLKASRMHIYVRRGGPNYQRGLAKMRTLGEEI 395


>gi|297739077|emb|CBI28566.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 86/413 (20%), Positives = 158/413 (38%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++P+    +  S            L     VVK  +  G
Sbjct: 47  KIREYDSKRLLKEHFKRLSGTDLPIKSAQITESTDFNELAEKEPWLLSGKLVVKPDMLFG 106

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V + ++E LG  +   + G     +    VE   
Sbjct: 107 KRGKSGL----------VALNLDLAQVGTFVKERLGKEV---EMGGCRGPITTFIVEPFI 153

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IEE       K+  + I      TSE  + 
Sbjct: 154 PHNEEFYLNMVSERLGSSISF--SECGGIEIEENW----DKVKTIFIPTGATFTSEICSP 207

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   +    +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 208 LVATLPLE--IKGKIEEFIKVVFALFLDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 264

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 265 AFKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 324

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T++       + I GGI 
Sbjct: 325 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALVIGGGIA 384

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A+KE +  +      + +R  G N   G   +   G  +
Sbjct: 385 NFTDVAATFNGIIRALKEKESKLKASRMHIYVRRGGPNYQRGLAKMRTLGEEI 437


>gi|116787022|gb|ABK24345.1| unknown [Picea sitchensis]
 gi|224285160|gb|ACN40307.1| unknown [Picea sitchensis]
 gi|224285488|gb|ACN40465.1| unknown [Picea sitchensis]
          Length = 423

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 92/413 (22%), Positives = 162/413 (39%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++        V +    V  S    E A +   +     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLTGLQVDIKSAQVTESTDFNELADREPWVSSSKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  VI+ ++E LG  +   + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVIAFVKERLGKEV---EMGGAKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E Y+S++ DR    ++F  S  GG++IEE       K+  + +     +T+E  A 
Sbjct: 112 PHDDEFYMSIMSDRLGSTISF--SECGGIEIEENW----DKVKSVFVPTEKSLTAELCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R         ++  F D D + LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--IRGKIETFIKGVFNLFLDLDFTFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQHN---LSYIALDGNIGCMVNGAGLA 279
            +++               +   SE     ++ K  +    + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVMSPSESAIHGMDEKTSSSLKFTILNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++D+V    +++    T++   +   + I GGI 
Sbjct: 283 VIYADTVGDLGFANELGNYAEYSGAPNEDEVLQYARVLIDCATANPDGRKRALVIGGGIA 342

Query: 334 RCDVL---VKGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A++E +  +      + +R  G N   G   +   G  +
Sbjct: 343 NFTDVSATFSGIIRALREKESKLKASRMQVYVRRGGPNYQNGLAKMRALGEEI 395


>gi|224124954|ref|XP_002319466.1| predicted protein [Populus trichocarpa]
 gi|222857842|gb|EEE95389.1| predicted protein [Populus trichocarpa]
          Length = 423

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 89/413 (21%), Positives = 156/413 (37%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-----NVPVA--KGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      + +      V       E   +   +     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLSGIDLLIRSAQVTEGTDFTELTNQEPWISSTKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V   ++  LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVADFVKARLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E Y S++ +R    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEFYFSIVSERLGCTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTLEACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R    D    ++  F D D S LE+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--IRGKIVDFIICVFSVFQDLDFSFLEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNQKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A++E +  +      L +R  G N   G   +   G  V
Sbjct: 343 NFTDVAATFNGIIRALREKESKLKAARMHLYVRRGGPNYQTGLAKMRTLGEEV 395


>gi|76664064|emb|CAI62554.1| succinyl-CoA ligase [Nyctotherus ovalis]
          Length = 163

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/156 (54%), Positives = 109/156 (69%), Gaps = 5/156 (3%)

Query: 246 SEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ 305
            + D  E +A    ++Y+AL GNIGCMVNGAGLAMATMDIIKL GG PANFLDVGGGA  
Sbjct: 7   EDTDPNEEKASAIGINYVALSGNIGCMVNGAGLAMATMDIIKLKGGEPANFLDVGGGASA 66

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
            +V +AF+I+ S   VKGIL+NIFGGIMRCD++  GI+ A K + + +PLV+RL G N  
Sbjct: 67  SQVKSAFEILESHPQVKGILVNIFGGIMRCDIIADGIIQACKSINLKVPLVVRLTGTNSK 126

Query: 366 IGNRLIAE-----SGLNVITAIDLDDAAQKIVHAVK 396
            G  ++ +         +ITA +LDDAA K+V A+K
Sbjct: 127 QGMEMLNKFTRESKNFKIITADNLDDAATKVVAALK 162


>gi|168000813|ref|XP_001753110.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695809|gb|EDQ82151.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 424

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 166/414 (40%), Gaps = 59/414 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K +L+++       ++ +    V  S    + A +   L     VVK  +  G
Sbjct: 5   KIREYDSKRILKEHLKKLAGIDIAIKSAQVTESTDFTKLAEQEPWLNSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D  G          V++ ++E LG  +  + +G  G  +    VE   
Sbjct: 65  KRGKSGLVALNLDLAG----------VVAFVKERLGKEV--EMSGTKG-PITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-VTSEDVA 171
               E YLS++ DR    V+F  S  GG+DIEE       K+  + +      +TSE  A
Sbjct: 112 PHKDEYYLSIVSDRLGVNVSF--SECGGIDIEENW----DKVKAIFVPTEQSTLTSEICA 165

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+   R    +    ++  F + D +LLE+NP  I+ +G    LD +   DD 
Sbjct: 166 PLVATLPLE--VRPKIEEFLKGVFIVFSELDFTLLEMNPFTIV-DGTPYPLDMRGELDDT 222

Query: 232 ALYRHLDIQELRD----------VSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           AL+++       +           +EE    ++ K      L+ +  +G I  MV G G 
Sbjct: 223 ALFKNTQKWGNVEFPLPFGRTMSPAEEKIHRMDEKTGASLKLTILNPEGRIWTMVAGGGA 282

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G  ++++      A     T++   +   + + GGI
Sbjct: 283 SVIYSDTVGDLGFASELGNYAEYSGAPNEEETLHFARALIDCCTANPDGRRRALVVGGGI 342

Query: 333 MRCDVLV---KGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A +E +       + + +R  G N   G   + E G  +
Sbjct: 343 ANFTDVAATFNGIIRAFREKESQLKAARVQIYVRRGGPNYQKGLAKMRELGAEI 396


>gi|331667093|ref|ZP_08367958.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
 gi|331065449|gb|EGI37342.1| succinyl-CoA ligase [ADP-forming] subunit beta [Escherichia coli
           TA271]
          Length = 145

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 10/150 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+V +S + + +     LG  L+T QT   G  VN + VE   DI +ELYL
Sbjct: 58  -------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDY 150
             +VDR+S  V F+AST+GG++IE+     
Sbjct: 111 GAVVDRSSRRVVFMASTEGGVEIEKSGGRN 140


>gi|225425595|ref|XP_002262914.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 423

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/413 (20%), Positives = 158/413 (38%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++P+    +  S            L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRLSGTDLPIKSAQITESTDFNELAEKEPWLLSGKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V + ++E LG  +   + G     +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAQVGTFVKERLGKEV---EMGGCRGPITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IEE       K+  + I      TSE  + 
Sbjct: 112 PHNEEFYLNMVSERLGSSISF--SECGGIEIEENW----DKVKTIFIPTGATFTSEICSP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   +    +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGKIEEFIKVVFALFLDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T++       + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A+KE +  +      + +R  G N   G   +   G  +
Sbjct: 343 NFTDVAATFNGIIRALKEKESKLKASRMHIYVRRGGPNYQRGLAKMRTLGEEI 395


>gi|168022395|ref|XP_001763725.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684969|gb|EDQ71367.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 423

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 167/420 (39%), Gaps = 62/420 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K + +++       +V +    V  S    E A K   L     VVK  +  G
Sbjct: 5   KIREYNSKRIFKEHLKRLAGIDVDIKAAQVTQSTDFNELANKEAWLNSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D  G          V S +++ LG  +  + +G  G  +    VE   
Sbjct: 65  KRGKSGLVALNLDLAG----------VESFVKDRLGKEV--EMSGTKG-PITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YLS++ DR    ++F  S  GG++IEE      +K+  + I     +TSE  A 
Sbjct: 112 PHSDEFYLSIVSDRLGANISF--SECGGIEIEENW----EKVRSVFIPTEKTLTSELCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+ +  I+        +  F D D +LLE+NP  ++ N  L  LD +   DD A
Sbjct: 166 LIATLPLEVRPIIEA--FLKGSFAVFEDLDFTLLEMNPFTLVNNVPL-PLDMRGELDDTA 222

Query: 233 LYRHLDIQELRD----------VSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
           L+++       +           +EE    ++ K      L+ +   G I  MV G G +
Sbjct: 223 LFKNFQKWGNVEFPLPFGRTMTPAEESIHRMDEKTGASLKLTILNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA----FKIITSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++            T++   +   + + GGI 
Sbjct: 283 VIYADTVGDLGYAHELGNYAEYSGAPNEEETLQYARALIDCCTANPDGRKRALVVGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKIN-----IPLVMRLEGANVDIG----NRLIAESGLNVITA 381
               +     GI+ A++E + +     + + +R  G N   G      L  E+G+ +   
Sbjct: 343 NFTDVAATFNGIIRAMREKQSHLKAARVNIFVRRGGPNYLKGLANMRALSEETGVPIEVY 402


>gi|294948874|ref|XP_002785938.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900046|gb|EER17734.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 237

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 9/199 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HE+Q+  +  KY V V  G    +   AE   K L G   VVK+Q+ AGGRG+G FK
Sbjct: 48  LNLHEHQSLDVFEKYGVCVPHGYDAKTPEEAEQFAKALGGGDVVVKAQVLAGGRGRGYFK 107

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           E     +GGV +  +          ++G TL  K       R++     +   I  E Y 
Sbjct: 108 E--NGFQGGVHIVKNPIEAKDLASRMIGKTLSRKGR----LRLSKF---ERFKIASEKYF 158

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++L++R+ G    +    GGM IE+VA ++P  I K+ +D   G++  +   + + +  +
Sbjct: 159 AILMNRSFGGPVMVGCKYGGMSIEDVAAEHPDAIIKIPVDIDNGISDGEAREMAEKIGFE 218

Query: 181 GQARIDGGDLFPNLYKAFC 199
           G+   +       LY+ F 
Sbjct: 219 GEIVDEAVIAIKALYQTFR 237


>gi|302757147|ref|XP_002961997.1| hypothetical protein SELMODRAFT_164817 [Selaginella moellendorffii]
 gi|300170656|gb|EFJ37257.1| hypothetical protein SELMODRAFT_164817 [Selaginella moellendorffii]
          Length = 423

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 160/413 (38%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V         A K   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKQHLKRLASIDLALHSAQVTQDTDFDALADKEPWLNSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D  G          V + ++E LG  +    T      +    VE   
Sbjct: 65  KRGKSGLVALNLDLAG----------VEAFVKERLGREVEMDGTKA---PITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YLSL+  R    ++F  S  GG++IEE      +K+  + +     +T+E  A 
Sbjct: 112 PHDSEFYLSLVSHRLGVEISF--SECGGIEIEENW----EKVKTVFVPTEQPLTAETCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R         ++  F D D SL+E+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--IRGKIETFIRGVFSVFQDLDFSLIEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRD----------VSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
           L+++       +           +EE   +++ K      L+ +   G I  MV G G +
Sbjct: 223 LFKNFQKWGNVEFPVPFGRVMTPAEESIHKMDEKTGASLKLTILNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++      A    +T++   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYAHELGNYAEYSGAPSEEETLHYARALIDCVTANPDGRRRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A++E +       + + +R  G N   G   +   G ++
Sbjct: 343 NFTDVAATFNGIIRALREKESQLKAAKVHIFVRRGGPNYQKGLERMRTLGRDI 395


>gi|255641571|gb|ACU21059.1| unknown [Glycine max]
          Length = 423

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 94/441 (21%), Positives = 172/441 (39%), Gaps = 69/441 (15%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++        +P+    + +S      +     L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRLSGKELPIKSAQITASTDFTELQEKEPWLSSSKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D             V+S ++E LG  +  + +G  G  +    VE   
Sbjct: 65  KRGKSGLVALNLDF----------AQVVSFVKERLGKEV--EMSGCKG-PITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IE+       K+    +   + +TSE VA 
Sbjct: 112 PHNEEFYLNIVSERLGNSISF--SECGGIEIEDNW----DKVKTAFVPTGMSLTSEIVAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   + +  +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGEIEEFLKVVFTLFQDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGDIEFPLPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++V    +++    T++   +   + I GGI 
Sbjct: 283 VIYADTVGDLGFASELGNYAEYSGAPKEEEVLQYARVVIDCATANPDGQKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVI-- 379
               +     GI+ A+KE +  +        +R  G N   G  L+     E G+ +   
Sbjct: 343 NFTDVAATFSGIIRALKEKESKLKAARMHTFVRRGGPNYQKGLALMRALGEEIGIPIEVY 402

Query: 380 -TAIDLD----DAAQKIVHAV 395
                +     +A Q I  A 
Sbjct: 403 GPEATMTGICKEAIQFITAAA 423


>gi|302775344|ref|XP_002971089.1| hypothetical protein SELMODRAFT_147613 [Selaginella moellendorffii]
 gi|300161071|gb|EFJ27687.1| hypothetical protein SELMODRAFT_147613 [Selaginella moellendorffii]
          Length = 423

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 160/413 (38%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V         A K   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKQHLKRLASIDLALHSAQVTQETDFDALADKEPWLNSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D  G          V + ++E LG  +    T      +    VE   
Sbjct: 65  KRGKSGLVALNLDLAG----------VEAFVKERLGREVEMDGTKA---PITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YLSL+  R    ++F  S  GG++IEE      +K+  + +     +T+E  A 
Sbjct: 112 PHDSEFYLSLVSHRLGVEISF--SECGGIEIEENW----EKVKTVFVPTEQPLTAETCAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   R         ++  F D D SL+E+NP  ++ NG    LD +   DD A
Sbjct: 166 LIATLPLE--IRGKIETFIRGVFSVFEDLDFSLIEMNPFTLV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQELRD----------VSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
           L+++       +           +EE   +++ K      L+ +   G I  MV G G +
Sbjct: 223 LFKNFQKWGNVEFPVPFGRVMTPAEESIHKMDEKTGASLKLTILNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++      A    +T++   +   + I GGI 
Sbjct: 283 VIYADTVGDLGYAHELGNYAEYSGAPSEEETLHYARALIDCVTANPDGRRRALLIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A++E +       + + +R  G N   G   +   G ++
Sbjct: 343 NFTDVAATFNGIIRALREKESQLKVAKVHIFVRRGGPNYQKGLERMRTLGRDI 395


>gi|224110934|ref|XP_002315687.1| predicted protein [Populus trichocarpa]
 gi|222864727|gb|EEF01858.1| predicted protein [Populus trichocarpa]
          Length = 423

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 88/435 (20%), Positives = 161/435 (37%), Gaps = 65/435 (14%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LLR++       ++P+    V  S            L     VVK  +  G
Sbjct: 5   KIREYDSKRLLREHFKRFSGRDLPIKSAQVTESTDFNELAEKEPWLASAKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V ++  L  V   I+  LG  +   + G     +    +E   
Sbjct: 65  KRGKSGL----------VALDLDLDQVAEFIQGRLGKEV---EMGGCKGPITTFIIEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YL+++ +R    ++F  S  GG++IEE       K+  + +      TS D A 
Sbjct: 112 PHNQEFYLNIVSERLGCSISF--SECGGIEIEENW----DKVKTIFVPTRATFTSGDCAL 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L      + +  +    ++  F D D + LE+NP   + +G+   LD +   DD A
Sbjct: 166 LVATL--PSAIKGEIEEFIQVVFALFQDLDFTFLEMNPFTFV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   SE     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGSIEFPMPFGRVMSPSESFLHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G  ++++V    +++    T+D       + I GGI 
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLRYARVVIDCATADPDGHKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIA----ESGLNVI-- 379
               +     GI+  +KE +  +      + +R  G N   G   +     E G+ +   
Sbjct: 343 NFTDVAATFNGIIRTLKEKESKLKAARMSIYVRRGGPNYQTGLAKMRALGEEIGIPIEVY 402

Query: 380 -TAIDLDDAAQKIVH 393
                +    ++ + 
Sbjct: 403 GPEATMTGICKQAIE 417


>gi|167945187|ref|ZP_02532261.1| succinyl-CoA synthetase beta chain [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589068|gb|ABG77043.1| succinyl-CoA ligase beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 136

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 110/136 (80%)

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREI 253
           LY+ +  KD+SL+EINPLI+  +G+L  LD+KI+ D NALYRH D+  LRD S+ED +E 
Sbjct: 1   LYRLYMAKDVSLIEINPLIVTGDGQLMALDAKINIDSNALYRHQDLVALRDPSQEDEKEA 60

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
            A QH+L+YI LDG+IGCMVNGAGLAMATMD++KL+GG PANFLDVGGGA  ++V  AFK
Sbjct: 61  AAAQHDLNYITLDGSIGCMVNGAGLAMATMDMVKLHGGDPANFLDVGGGATAERVTEAFK 120

Query: 314 IITSDSSVKGILINIF 329
           +I SD+ VK +L+NIF
Sbjct: 121 LILSDAKVKTVLVNIF 136


>gi|15220186|ref|NP_172537.1| ACLA-1; ATP citrate synthase [Arabidopsis thaliana]
 gi|30681854|ref|NP_849634.1| ACLA-1; ATP citrate synthase [Arabidopsis thaliana]
 gi|6573737|gb|AAF17657.1|AC009398_6 F20B24.11 [Arabidopsis thaliana]
 gi|15810349|gb|AAL07062.1| putative ATP citrate-lyase [Arabidopsis thaliana]
 gi|16648642|gb|AAL25637.1| ATP-citrate lyase subunit A [Arabidopsis thaliana]
 gi|20453214|gb|AAM19846.1| At1g10670/F20B24_11 [Arabidopsis thaliana]
 gi|21280803|gb|AAM45027.1| putative ATP citrate-lyase [Arabidopsis thaliana]
 gi|110740356|dbj|BAF02073.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190503|gb|AEE28624.1| ATP-citrate lyase A-1 [Arabidopsis thaliana]
 gi|332190504|gb|AEE28625.1| ATP-citrate lyase A-1 [Arabidopsis thaliana]
 gi|332190506|gb|AEE28627.1| ATP-citrate lyase A-1 [Arabidopsis thaliana]
          Length = 423

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 91/414 (21%), Positives = 165/414 (39%), Gaps = 60/414 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
            I EY +K L++++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5   KIREYDSKRLVKEHFKRLSGKELPI-RSVQINETTDLNELVEKEPWLSSEKLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK     L  D             V + ++E LG  +  + +G  G  +    VE  
Sbjct: 64  GKRGKSGLVALKLDF----------ADVATFVKERLGKEV--EMSGCKG-PITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ DR    ++F  S  GG++IEE       K+  + +     +T E  A
Sbjct: 111 VPHNEEYYLNVVSDRLGCSISF--SECGGIEIEENW----DKVKTIFLPTGASLTPEICA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+ +A I+  +    ++  F D D + LE+NP  ++ +G    LD +   DD 
Sbjct: 165 PLVATLPLEIKAEIE--EFIKVIFTLFQDLDFTFLEMNPFTLV-DGSPYPLDMRGELDDT 221

Query: 232 ALYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           A +++               +   +E     ++ K       + +   G I  MV G G 
Sbjct: 222 AAFKNFKKWGDIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G   +D+V    +++    T++   K   + I GGI
Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341

Query: 333 MRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A+KE +  +      + +R  G N   G   +   G ++
Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDDI 395


>gi|19698853|gb|AAL91162.1| similar to ATP-citrate-lyase [Arabidopsis thaliana]
 gi|22136126|gb|AAM91141.1| similar to ATP-citrate-lyase [Arabidopsis thaliana]
          Length = 423

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 163/414 (39%), Gaps = 60/414 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
            I EY +K L++++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5   KIREYDSKRLVKEHFKRLSGQELPI-RSVQINQETDLNELVEREPWLSSEKLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK     L  D             V + ++E LG  +  + +G  G  +    VE  
Sbjct: 64  GKRGKSGLVALNLDF----------ADVATFVKERLGKEV--EMSGCKG-PITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ DR    ++F  S  GG+DIEE       K+  + I     +T E  A
Sbjct: 111 VPHNEEFYLNIVSDRLGCSISF--SECGGIDIEENW----DKVKTITIPTGPSLTFEICA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+   + +  D    ++  F D D + LE+NP  ++ +G+   LD +   DD 
Sbjct: 165 PLVATLPLE--IKGELEDFIQVIFTLFEDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDT 221

Query: 232 ALYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           A +++               +   +E     ++ K       + +   G I  MV G G 
Sbjct: 222 AAFKNFKKWGDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G   +D+V    +++    T++   K   + I GGI
Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341

Query: 333 MRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A+KE +  +      + +R  G N   G   +   G  +
Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEI 395


>gi|15219818|ref|NP_176280.1| ACLA-2; ATP citrate synthase [Arabidopsis thaliana]
 gi|2462746|gb|AAB71965.1| Similar to ATP-citrate-lyase [Arabidopsis thaliana]
 gi|332195614|gb|AEE33735.1| ATP-citrate lyase A-2 [Arabidopsis thaliana]
          Length = 423

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 163/414 (39%), Gaps = 60/414 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
            I EY +K L++++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5   KIREYDSKRLVKEHFKRLSGQELPI-RSVQINQETDLNELVEREPWLSSEKLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK     L  D             V + ++E LG  +  + +G  G  +    VE  
Sbjct: 64  GKRGKSGLVALNLDF----------ADVATFVKERLGKEV--EMSGCKG-PITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ DR    ++F  S  GG+DIEE       K+  + I     +T E  A
Sbjct: 111 VPHNEEFYLNIVSDRLGCSISF--SECGGIDIEENW----DKVKTITIPTGASLTFEICA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+   + +  D    ++  F D D + LE+NP  ++ +G+   LD +   DD 
Sbjct: 165 PLVATLPLE--IKGELEDFIQVIFTLFEDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDT 221

Query: 232 ALYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           A +++               +   +E     ++ K       + +   G I  MV G G 
Sbjct: 222 AAFKNFKKWGDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G   +D+V    +++    T++   K   + I GGI
Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341

Query: 333 MRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A+KE +  +      + +R  G N   G   +   G  +
Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEI 395


>gi|840845|emb|CAA58870.1| succinyl-coA synthetase beta-subunit from sucC [Pseudomonas
           aeruginosa PAO1]
          Length = 150

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 91/148 (61%), Positives = 122/148 (82%)

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
            RE  A++  L+Y+AL+GNIGCMVNGAGLAM TMDI+ L+GG PANFLDVGGGA +++V 
Sbjct: 2   PREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVT 61

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            AFKII SDS+VK +L+NIFGGI+RCD++ +GI+ AVKEV + +P+V+RLEG N ++G +
Sbjct: 62  EAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAK 121

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAVKG 397
           ++AESGLN+I A  L DAAQ++V A +G
Sbjct: 122 VLAESGLNIIAATSLTDAAQQVVKAAEG 149


>gi|302036204|ref|YP_003796526.1| ATP-citrate lyase subunit beta [Candidatus Nitrospira defluvii]
 gi|300604268|emb|CBK40600.1| ATP-citrate lyase, beta subunit [Candidatus Nitrospira defluvii]
          Length = 399

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 80/421 (19%), Positives = 155/421 (36%), Gaps = 53/421 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAA---ESAIKTLPGPLYVVKSQIHAGGRGKGR 58
            + E     L++K+ + V   VV++SV        A + L     V K+    G R K  
Sbjct: 3   KVLEGPGMGLMKKWGINVPNYVVVTSVDELSRLGQANEWLKKSKLVAKAHEALGSRFKLG 62

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             ++  D K             +  +E++G  + +         V  V V +      E 
Sbjct: 63  LVKIDLDFKA----------AEAATKEMIGRQVGS-------ITVTQVIVSEMIPHKEEY 105

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y ++   R    V       GG+++E       +++ +L ++     + E +  L     
Sbjct: 106 YCAVKSTREGSEVLVANC--GGIEVESNW----ERVKRLCLEIGQAPSPESLEKLSKEAG 159

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHL 237
             G       +    ++  F  +D   LE+NP+++   +  L  LD+    D +A +RH 
Sbjct: 160 FSGPLAKKVAEFAGKMFACFDSEDAQYLEVNPVVLRAADEELVALDAVTLLDGDAKFRHP 219

Query: 238 DI-----QEL---RDVSEEDSREIEAKQHN-LSYIALD-GNIGCMVNGAGLAMATMDIIK 287
           D       E        E +   +++K    + +I +  G+   +  G G ++   D + 
Sbjct: 220 DWNFAFAAEFGRAYSKQELEVMAVDSKIKGSVKFIEIPGGDTAMLPAGGGASVYYSDAVV 279

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK---GILS 344
             GG  AN+ +  G      V    + + S   ++ I++   G I     + K   GI++
Sbjct: 280 ARGGKLANYAEYSGDPPDWAVEVLTEKVCSLPGIRNIIV--GGAIANFTDVKKTFGGIIN 337

Query: 345 AVKEVKI-----NIPLVMRLEGANVDIGN---RLIAESGLNVITAI---DLDDAAQKIVH 393
             ++ K      N+ + +R  G     G    R + E G ++        L D   K + 
Sbjct: 338 GFRKAKSEGKLKNVKIWVRRGGPREKEGLDAMRALKEEGFDINVFDRNTPLTDIVDKALQ 397

Query: 394 A 394
           A
Sbjct: 398 A 398


>gi|297843886|ref|XP_002889824.1| ATP-citrate lyase A-1 [Arabidopsis lyrata subsp. lyrata]
 gi|297335666|gb|EFH66083.1| ATP-citrate lyase A-1 [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 89/414 (21%), Positives = 162/414 (39%), Gaps = 60/414 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
            I EY +K L++++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5   KIREYDSKRLVKEHFKRLSGKELPI-RSVQINETTDLNEVVEKEPWLSSEKLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK     L  D             V + +++ LG  +  + +G  G  +    VE  
Sbjct: 64  GKRGKSGLVALKLDF----------ADVATFVKDRLGKEV--EMSGCKG-PITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ DR    ++F  S  GG++IEE       K+  + +     +T E  A
Sbjct: 111 VPHNEEFYLNVVSDRLGCSISF--SECGGIEIEENW----DKVKTIFLPTGASLTPEICA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+ +A     +    ++  F D D + LE+NP  ++ +G    LD +   DD 
Sbjct: 165 PLVATLPLEIKA--QIEEFIKVIFTLFQDLDFTFLEMNPFTLV-DGSPYPLDMRGELDDT 221

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQH-------------NLSYIALDGNIGCMVNGAGL 278
           A +++       +      R + A +                + +   G I  MV G G 
Sbjct: 222 AAFKNFKKWGDIEFPMPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G   +D+V    +++    T++   K   + I GGI
Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341

Query: 333 MRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A+KE +  +      + +R  G N   G   +   G ++
Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRTLGDDI 395


>gi|222617312|gb|EEE53444.1| hypothetical protein OsJ_36536 [Oryza sativa Japonica Group]
          Length = 457

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 151/391 (38%), Gaps = 55/391 (14%)

Query: 24  VISSVHAAESAIK--TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           V  S    E   +   L     VVK  +  G RGK             V +   L  V  
Sbjct: 68  VTESTDFTELVNQEPWLSSMKLVVKPDMLFGKRGKSGL----------VALNLDLAQVRQ 117

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGM 141
            ++E LG   +  + G   + +    VE      +E YLS++ +R    ++F  S  GG+
Sbjct: 118 FVKERLG---VEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISF--SECGGI 172

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           +IEE       K+  + +     +T +  A L   L L+   R   GD    +Y  F D 
Sbjct: 173 EIEENW----DKVKTVFLPTEKAMTPDACAPLIATLPLE--VRTKIGDFIRGVYSVFQDL 226

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD----------IQELRDVSEEDSR 251
           D S LE+NP  ++ NG    LD +   DD A +++               +   SE    
Sbjct: 227 DFSFLEMNPFTMV-NGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFGRVLSPSESFIH 285

Query: 252 EIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQD 306
           E++ K  +    + +   G I  MV G G ++   D +   G A    N+ +  G  +++
Sbjct: 286 ELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEE 345

Query: 307 KVAAAFKIIT----SDSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKINIP----- 354
           +V    +++     +D   +   + I GGI     +     GI+ A++E +  +      
Sbjct: 346 EVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALREKESKLKAARMN 405

Query: 355 LVMRLEGANVDIGNRLIA----ESGLNVITA 381
           + +R  G N   G   +     E G+ +   
Sbjct: 406 IYVRRGGPNYQTGLAKMRTLGAELGVPIEVY 436


>gi|56757245|gb|AAW26794.1| SJCHGC05557 protein [Schistosoma japonicum]
          Length = 177

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 2/178 (1%)

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           +LG  + T QTG +G   N +   +     RE YL++++DR+SG    +   QGG++IE+
Sbjct: 1   MLGHRIFTAQTGDSGQLCNTLLACERKYSRREHYLAIVLDRSSGGPVMVGCKQGGVNIED 60

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           +A+D P  + K+ ID   G+  +D   +   L        +       LYK F   D +L
Sbjct: 61  IARDNPDALIKIPIDIDKGLDKKDAVMMAHKLGFSHS--DEAAVYIERLYKLFDSTDCTL 118

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263
           LEINP+    NG +  +D K++FDDNA +R  +    RD S+ED R+++A    L+YI
Sbjct: 119 LEINPISQDINGHVICMDCKMNFDDNAAFRQKENFAQRDWSQEDERDVKATNAGLNYI 176


>gi|218187089|gb|EEC69516.1| hypothetical protein OsI_38756 [Oryza sativa Indica Group]
          Length = 457

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 94/454 (20%), Positives = 164/454 (36%), Gaps = 96/454 (21%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAI------------------- 35
            I EY +K LLR++       ++ +       +  AA+                      
Sbjct: 5   KIREYDSKRLLREHLKRLAAIDLHILSAQQSYTSTAAKLFAYLMQPAIIGASFVLWDLIS 64

Query: 36  -----------------KTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKS 78
                              L     VVK  +  G RGK             V +   L  
Sbjct: 65  GMMVTESTDFTELVNQEPWLSSMKLVVKPDMLFGKRGKSGL----------VALNLDLAQ 114

Query: 79  VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQ 138
           V   ++E LG   +  + G   + +    VE      +E YLS++ +R    ++F  S  
Sbjct: 115 VRQFVKERLG---VEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGFTISF--SEC 169

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAF 198
           GG++IEE       K+  + +     +T +  A L   L L+   R   GD    +Y  F
Sbjct: 170 GGIEIEENW----DKVKTVFLPTEKAMTPDACAPLIATLPLE--VRTKIGDFIRGVYSVF 223

Query: 199 CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD----------IQELRDVSEE 248
            D D S LE+NP  ++ NG    LD +   DD A +++               +   SE 
Sbjct: 224 QDLDFSFLEMNPFTMV-NGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFGRVLSPSES 282

Query: 249 DSREIEAKQHN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGA 303
              E++ K  +    + +   G I  MV G G ++   D +   G A    N+ +  G  
Sbjct: 283 FIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAP 342

Query: 304 DQDKVAAAFKIIT----SDSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKINIP-- 354
           ++++V    +++     +D   +   + I GGI     +     GI+ A++E +  +   
Sbjct: 343 NEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALREKESKLKAA 402

Query: 355 ---LVMRLEGANVDIGNRLIA----ESGLNVITA 381
              + +R  G N   G   +     E G+ +   
Sbjct: 403 RMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVY 436


>gi|328870358|gb|EGG18733.1| putative ATP citrate synthase [Dictyostelium fasciculatum]
          Length = 464

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 93/424 (21%), Positives = 165/424 (38%), Gaps = 73/424 (17%)

Query: 2   NIHEYQAKALLRKY------------NVPVAKGVVISSVHA--AESAIKTLPGPLYVVKS 47
            I EY +K+LL+++             V V +G +  S+       A   L     VVK 
Sbjct: 5   KIREYSSKSLLKQHLASLCNERLNLKMVQVQQGSL--SLVELMTLPAHSWLQSTKLVVKP 62

Query: 48  QIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
            +  G RGK             V + +++      I+E +G    +         V    
Sbjct: 63  DMLFGKRGKNNL----------VLLNATVVEADQFIKERMGK---SVTISGKTGPVTHFI 109

Query: 108 VEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           VE       E YLS++  R    ++F  S+ GGM+IEE+            +D   G  S
Sbjct: 110 VEPFVPHAVEYYLSVVAKRDVNTISF--SSCGGMEIEELWDKVK------SVDIAYG-DS 160

Query: 168 EDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
            D  +L ++++   Q R    D   N+YK F +     +E+NP  + ++G+   LD +  
Sbjct: 161 IDTVNLHEIVDNTIQNREYIIDFIKNVYKIFEELSFHFIEMNPFTLDQDGKPFPLDMRGE 220

Query: 228 FDDNALYR------------HLDIQELRDVSEEDSREIEAKQH-----NLSYIALDGNIG 270
            D+ A ++                   R++ +E++   +  +       L+ +   G I 
Sbjct: 221 IDECASFKCGNKWMVDGDPIQFPQPFGRELFQEETFINDIDEKTGASLKLTLLNPTGRIW 280

Query: 271 CMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQDKVAAAFKIITS------DSSVK 322
            MV G G ++   D +    YG    N+ +  G  +++        + S      D   +
Sbjct: 281 AMVAGGGASVIYADTVADLGYGHELGNYGEYSGDPNEEDTNKYASTMLSLATRNPDGRPR 340

Query: 323 GILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAES 374
            +L  I GGI     +    KGI+ A+K+     V+ N+ + +R  G N   G + + E 
Sbjct: 341 ALL--IGGGIANFTDVAVTFKGIIHAIKQYSDEIVRSNLHIFVRRGGPNYQSGLQHMREI 398

Query: 375 GLNV 378
           G  +
Sbjct: 399 GHKL 402


>gi|71006788|ref|XP_758051.1| hypothetical protein UM01904.1 [Ustilago maydis 521]
 gi|46097552|gb|EAK82785.1| hypothetical protein UM01904.1 [Ustilago maydis 521]
          Length = 400

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 18/224 (8%)

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
           + G A  +  ++   ++K F   +        +    +  ++V+   + FDD A+ R   
Sbjct: 161 VHGLASKEAQNVIAAMWKVFDQYEGLWFSFTLVPAQGDTEVKVVAPYMEFDDFAVRRQPL 220

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL------------------DGNIGCMVNGAGLAM 280
           ++   +     +    A+   L ++ L                  +GNIGC   GAG AM
Sbjct: 221 LKPYFESRPRHTNTARAEDSGLFFVKLSDVDAPTLTQASDGKELPEGNIGCFGYGAGNAM 280

Query: 281 ATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK 340
           ATMD + + GG PANFLD GGGA++     A + +  D +VK I IN FGGI R D++ +
Sbjct: 281 ATMDGLNVAGGRPANFLDGGGGANRTNAKLAVETLNRDPAVKAIFINTFGGITRTDIVSQ 340

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
           GI+ AVK+ KI  P+V+R++G   +   +++  SGL      D 
Sbjct: 341 GIIDAVKDDKITKPIVVRMKGTGSEDAAKVLQASGLEFAFHDDF 384


>gi|21593129|gb|AAM65078.1| ATP citrate-lyase, putative [Arabidopsis thaliana]
          Length = 423

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 90/414 (21%), Positives = 164/414 (39%), Gaps = 60/414 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
            I EY +K L++++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5   KIREYDSKRLVKEHFKRLSGKELPI-RSVQINETTDLNELVEKEPWLSSEKLVVKPDMLF 63

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK     L  D             V + ++E LG  +  + +G  G  +    VE  
Sbjct: 64  GKRGKSGLVALKLDF----------ADVATFVKERLGKEV--EMSGCKG-PITTFIVEPF 110

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                E YL+++ DR    ++F  S  GG++IEE       K+  + +     +T E  A
Sbjct: 111 VPHNEEYYLNVVSDRLGCSISF--SECGGIEIEENW----DKVKTIFLPTGASLTPEICA 164

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L   L L+ +A I+  +    ++  F D D + LE+NP  ++ +G    LD +   DD 
Sbjct: 165 PLVATLPLEIKAEIE--EFIKVIFTLFQDLDFTFLEMNPFTLV-DGSPYPLDMRGELDDT 221

Query: 232 ALYRHLDIQELRD----------VSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGL 278
           A +++       +           +E     ++ K       + +   G I  MV G G 
Sbjct: 222 AAFKNFKKWGYIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGA 281

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGI 332
           ++   D +   G A    N+ +  G   +D+V    +++    T++   K   + I GGI
Sbjct: 282 SVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGI 341

Query: 333 MRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
                +     GI+ A+KE +  +      + +R    N   G   +   G ++
Sbjct: 342 ANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGRPNYQKGLAKMRALGDDI 395


>gi|255644448|gb|ACU22728.1| unknown [Glycine max]
          Length = 423

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 88/413 (21%), Positives = 165/413 (39%), Gaps = 58/413 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++        +P+    + +S      +     L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRLSGKELPIKSAQITASTDFTELQEKEPWLSPSKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D             V+S ++E LG  +  + +G  G  +    VE   
Sbjct: 65  KRGKSGLVALNLDF----------AQVVSFVKERLGKEV--EMSGCKG-PITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IE+       K+    +   + +TS  VA 
Sbjct: 112 PHNEEFYLNIVSERLGNSISF--SECGGIEIEDNW----DKVKTAFVPTGVSLTSGIVAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   + +  +    ++  F D D + LE+NP  ++ +G+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGEIEEFLKVVFTLFQDLDFTFLEMNPFTLV-DGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E     ++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGDIEFPLPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII----TSDSSVKGILINIFGGIM 333
           +   D +   G A    N+ +  G   +++V    +++    T++   +   + I GGI 
Sbjct: 283 VIYADTVGDLGFASELGNYAEYSGAPKEEEVLQYARVVIDCATANPDDQKRALVIGGGIA 342

Query: 334 RCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
               +     GI+ A+KE +  +      + +R  G N   G  L+   G ++
Sbjct: 343 NFTDVAATFSGIIRALKEKESKLKAARMHIFVRRGGPNYQKGLALMRALGEDI 395


>gi|332190505|gb|AEE28626.1| ATP-citrate lyase A-1 [Arabidopsis thaliana]
          Length = 443

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 91/434 (20%), Positives = 163/434 (37%), Gaps = 80/434 (18%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVISSV-----------------------HAA 31
            I EY +K L++++        +P+ + V    V                       +  
Sbjct: 5   KIREYDSKRLVKEHFKRLSGKELPI-RSVQADDVFWLHSCFGFSDIRHHVINETTDLNEL 63

Query: 32  ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTL 91
                 L     VVK  +  G RGK     L  D             V + ++E LG  +
Sbjct: 64  VEKEPWLSSEKLVVKPDMLFGKRGKSGLVALKLDF----------ADVATFVKERLGKEV 113

Query: 92  ITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYP 151
             + +G  G  +    VE       E YL+++ DR    ++F  S  GG++IEE      
Sbjct: 114 --EMSGCKG-PITTFIVEPFVPHNEEYYLNVVSDRLGCSISF--SECGGIEIEENW---- 164

Query: 152 QKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL 211
            K+  + +     +T E  A L   L L+ +A I+  +    ++  F D D + LE+NP 
Sbjct: 165 DKVKTIFLPTGASLTPEICAPLVATLPLEIKAEIE--EFIKVIFTLFQDLDFTFLEMNPF 222

Query: 212 IIMKNGRLRVLDSKISFDDNALYRHLD----------IQELRDVSEEDSREIEAKQH--- 258
            ++ +G    LD +   DD A +++               +   +E     ++ K     
Sbjct: 223 TLV-DGSPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFGRVMSPTESFIHGLDEKTSASL 281

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII- 315
             + +   G I  MV G G ++   D +   G A    N+ +  G   +D+V    +++ 
Sbjct: 282 KFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVI 341

Query: 316 ---TSDSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANV 364
              T++   K   + I GGI     +     GI+ A+KE +  +      + +R  G N 
Sbjct: 342 DCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNY 401

Query: 365 DIGNRLIAESGLNV 378
             G   +   G ++
Sbjct: 402 QKGLAKMRALGDDI 415


>gi|153820617|ref|ZP_01973284.1| succinyl-CoA synthetase beta chain [Vibrio cholerae NCTC 8457]
 gi|126508840|gb|EAZ71434.1| succinyl-CoA synthetase beta chain [Vibrio cholerae NCTC 8457]
          Length = 148

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 10/150 (6%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L  ++ +PV +G    +   A  A   +     VVK Q+HAGGRGK    
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  + + V +  ++ LG  L+T QT   G  V+ + VE+ ++I  ELYL
Sbjct: 58  -------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYL 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDY 150
             +VDR++  + F+AST+    + +  ++ 
Sbjct: 111 GAVVDRSTRRIVFMASTEVAWKLRKWQRNS 140


>gi|254169451|ref|ZP_04876275.1| Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           [Aciduliprofundum boonei T469]
 gi|197621602|gb|EDY34193.1| Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           [Aciduliprofundum boonei T469]
          Length = 165

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 25/186 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN++EYQ KAL RK+ VP  +G V          IK   G   V+K+Q+  GGRGK    
Sbjct: 3   MNLYEYQGKALFRKFGVPTPEGYVAFKPED----IKEFEGER-VIKAQVLTGGRGKS--- 54

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+  S+L+      R+IL   +        G +V+ V VE+   I +E Y+
Sbjct: 55  -------GGVKFASNLEEARELARQILAMEI-------KGHKVHAVLVEEKLKIEKEFYV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L+DR++     +AS +GG++IE V     +KI+K +++P IGV       L   +   
Sbjct: 101 SILIDRSTRSPLIMASPEGGVEIESVPD---EKIYKFVVNPEIGVQPFVGRLLSKKMGFT 157

Query: 181 GQARID 186
           G     
Sbjct: 158 GDLAKQ 163


>gi|66816581|ref|XP_642300.1| hypothetical protein DDB_G0278341 [Dictyostelium discoideum AX4]
 gi|60470363|gb|EAL68343.1| hypothetical protein DDB_G0278341 [Dictyostelium discoideum AX4]
          Length = 450

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 144/375 (38%), Gaps = 53/375 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            +     VVK  +  G RGK             V + ++L+     I+E +   +   + 
Sbjct: 53  WVNNSKLVVKPDMLFGKRGKNGL----------VLLNATLEEADKFIKEKINKPV---EI 99

Query: 97  GPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK 156
           G     V    VE       E YLS+  +R S  ++F  S  GGM+IEE       K+  
Sbjct: 100 GGKSGLVTHFIVEPFLPHTEEYYLSITAERESNRISF--SNCGGMEIEENW----DKVSS 153

Query: 157 LLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
           + I     +   D+ ++ D      Q R    D   N+YK F D     +E+NP  +   
Sbjct: 154 IEIPYGESIDKFDLHTIIDS---SVQNREYVIDFIRNVYKLFNDLSFHFIEMNPFTLDAE 210

Query: 217 GRLRVLDSKISFDDNALYR------------HLDIQELRDVSEEDSREIEAKQH-----N 259
           G+   LD++   D+ A ++                   R +  E++   E  +       
Sbjct: 211 GKPYPLDARGEVDECASFKCGGRWLVDGEPVQFPQPFGRSLYPEETYVNEIDEKTGASLK 270

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD-KVAAAFKII- 315
           L+ +   G I  MV G G ++   D +    +G    N+ +  G  +++     A  +I 
Sbjct: 271 LTLLNPKGRIWAMVAGGGASVIYADTVADLGFGNELGNYGEYSGDPNEEDTHKYACTLIS 330

Query: 316 --TSDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVD 365
             T +   +   + I GGI     +    KGI+ A+KE     +K N+ + +R  G N  
Sbjct: 331 LATRNPDSRPRALLIGGGIANFTDVAATFKGIIRAIKEYHDDIIKSNLSIFVRRGGPNYQ 390

Query: 366 IGNRLIAESGLNVIT 380
            G + + E G  +  
Sbjct: 391 SGLQHMREIGHKLHI 405


>gi|62732887|gb|AAX95006.1| hypothetical protein LOC_Os11g47120 [Oryza sativa Japonica Group]
 gi|77552658|gb|ABA95455.1| ATP-citrate synthase, putative [Oryza sativa Japonica Group]
 gi|125578059|gb|EAZ19281.1| hypothetical protein OsJ_34825 [Oryza sativa Japonica Group]
          Length = 387

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 94/429 (21%), Positives = 155/429 (36%), Gaps = 85/429 (19%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      +   +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   +  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLSTEKPMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+  AR   GD    ++  F D D S LE+NP  I+ NG    LD +   DD A
Sbjct: 166 LIATLPLE--ARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELDDTA 222

Query: 233 LY---RHLDIQELRDVSEEDS--------REIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
            +   R  +I      S E S          + +     + +   G I  MV G G ++ 
Sbjct: 223 AFKTSRSGEISNSHYHSVEFSVLQKALSMTWMRSASLKFTVLNPKGRIWTMVAGGGASVI 282

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL--- 338
             D                               T+D   +   + I GGI     +   
Sbjct: 283 YADTCA----------------------------TADPDGRKRALLIGGGIANFTDVGAT 314

Query: 339 VKGILSAVKEVKINIP-----LVMRLEGANVDIG----NRLIAESGLNVI---TAIDLDD 386
             GI+ A++E +  +      + +R  G N   G     +L AE G+ +        +  
Sbjct: 315 FSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTG 374

Query: 387 AAQKIVHAV 395
             ++ +  V
Sbjct: 375 ICKQAIECV 383


>gi|330796436|ref|XP_003286273.1| hypothetical protein DICPUDRAFT_54141 [Dictyostelium purpureum]
 gi|325083778|gb|EGC37222.1| hypothetical protein DICPUDRAFT_54141 [Dictyostelium purpureum]
          Length = 455

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 144/375 (38%), Gaps = 53/375 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            +     VVK  +  G RGK             V + ++L+   + I+E +   +   + 
Sbjct: 53  WVNNSKLVVKPDMLFGKRGKNGL----------VLLNATLEEADNFIKEKINKPV---EI 99

Query: 97  GPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK 156
           G     V    VE       E YLS+   R S  ++F  S  GGM+IEE       K+  
Sbjct: 100 GGKSGLVTHFIVEPFVPHTEEYYLSITAQRESNRISF--SNCGGMEIEENW----DKVST 153

Query: 157 LLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
           L I     +   D+ +L D   L    R    +   N+YK F D     +E+NP  +   
Sbjct: 154 LDIPYGETIDKVDLHTLIDSSVLN---REYVIEFIRNIYKLFNDLSFHFIEMNPFTLDHE 210

Query: 217 GRLRVLDSKISFDDNALYR------------HLDIQELRDVSEEDSREIEAKQH-----N 259
           G+   LD++   D+ A ++                   R +  E++   E  +       
Sbjct: 211 GKPYPLDARGEVDECAAFKCGGRWLVDGEPVQFPQPFGRSLYPEETYVNELDEKTGASLK 270

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD-KVAAAFKII- 315
           L+ +   G I  MV G G ++   D +    YG    N+ +  G  +++     A  II 
Sbjct: 271 LTLLNPTGRIWAMVAGGGASVIYADTVADMGYGHELGNYGEYSGDPNEEDTHKYACTIIS 330

Query: 316 --TSDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVD 365
             T +   K   + I GGI     +    KGI+ A+KE     +K N+ L +R  G N  
Sbjct: 331 LATRNPDSKPRALLIGGGIANFTDVAATFKGIIRAIKEYHQDIIKANLSLFVRRGGPNYQ 390

Query: 366 IGNRLIAESGLNVIT 380
            G + + E G  +  
Sbjct: 391 SGLQHMREIGHKLHI 405


>gi|154287808|ref|XP_001544699.1| hypothetical protein HCAG_01746 [Ajellomyces capsulatus NAm1]
 gi|150408340|gb|EDN03881.1| hypothetical protein HCAG_01746 [Ajellomyces capsulatus NAm1]
          Length = 154

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/153 (40%), Positives = 103/153 (67%), Gaps = 2/153 (1%)

Query: 246 SEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA 303
           ++E   E+EA++  + Y+ L  +G+IG +VNGAGLAM T+D + L+GG  ANFLD GG A
Sbjct: 2   AQEVPEEVEAEKEGIVYVKLPGEGSIGTLVNGAGLAMNTVDALTLHGGHCANFLDTGGKA 61

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
             + V ++F+I+ SD  VK I +NIFGG+  CD++  GI+ A +++ + +P+V+RL G N
Sbjct: 62  TSETVKSSFRIVLSDPRVKTIFVNIFGGLTLCDMIANGIIMAFRDLDMKVPVVVRLRGTN 121

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            ++G ++IA+S L +      ++AA K++   +
Sbjct: 122 EELGQKMIADSRLPLHAFDSFEEAASKVISLSR 154


>gi|289810701|ref|ZP_06541330.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 149

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 89/141 (63%), Positives = 117/141 (82%)

Query: 254 EAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           +A Q  L+Y+ALDGNIGCMVNGAGLAM TMDI+KL+GG PANFLDVGGGA +++V  AFK
Sbjct: 1   QAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFK 60

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
           II SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLEG N ++G + +A+
Sbjct: 61  IILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKKLAD 120

Query: 374 SGLNVITAIDLDDAAQKIVHA 394
           SGLN+I A  L DAAQ++V A
Sbjct: 121 SGLNIIAAKSLTDAAQQVVAA 141


>gi|57525528|ref|NP_001006271.1| succinate-CoA ligase, ADP-forming, beta subunit [Gallus gallus]
 gi|53131646|emb|CAG31835.1| hypothetical protein RCJMB04_11p24 [Gallus gallus]
          Length = 200

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 3/149 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V  S   A    K +     VVK+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYLSMGLLQEAGISVPHGLVAKSPEEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 113 ---GGLKGGVKIVFSPEEAKDISSKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYF 169

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKD 149
           ++ ++R+      I S+QGG++IE+VA +
Sbjct: 170 AITMERSFQGPVLIGSSQGGVNIEDVAAE 198


>gi|108864676|gb|ABA95549.2| ATP-citrate synthase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 368

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 82/352 (23%), Positives = 140/352 (39%), Gaps = 47/352 (13%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      +   +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   +  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLPTEKPMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+  AR   GD    ++  F D D S LE+NP  I+ NG    LD +   DD A
Sbjct: 166 LIATLPLE--ARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
            +++               +   +E    +++ K       + +   G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
           +   D +   G A    N+ +  G  ++++V    +++  D S + I I  F
Sbjct: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVL-DVSTQDITITTF 333


>gi|308803326|ref|XP_003078976.1| succinyl-CoA-ligase beta subunit (ISS) [Ostreococcus tauri]
 gi|116057429|emb|CAL51856.1| succinyl-CoA-ligase beta subunit (ISS) [Ostreococcus tauri]
          Length = 203

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 68/182 (37%), Positives = 102/182 (56%), Gaps = 4/182 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+HEYQ   ++ K  V V  GV  +++   ++A   L G   VVKSQI AGGRG G F 
Sbjct: 24  LNVHEYQGAEIMMKNGVRVPIGVACATLDDVDAACDALRGREVVVKSQILAGGRGLGTF- 82

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +   GGV V  +     +   ++LG TL+TKQ+GP G  VN +YV +   + RE+Y 
Sbjct: 83  --ASGFAGGVHVV-AKTEARATAEKMLGGTLVTKQSGPAGKPVNVLYVAEKLKLTREMYF 139

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +L++DR S     IAS +GG  IE++A   P+KI K+ +D + G+T      L + L ++
Sbjct: 140 ALMLDRASAGPLVIASAEGGTSIEDLAATQPEKIIKMRLDIVKGMTRPQADELVEKLGVK 199

Query: 181 GQ 182
             
Sbjct: 200 KH 201


>gi|167945875|ref|ZP_02532949.1| succinyl-CoA synthase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589124|gb|ABG77071.1| succinyl CoA ligase beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 172

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 10/126 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+HEYQAK L   Y +PV +G  +SS   A +A + L G +++VK+Q H GGRGK    
Sbjct: 1   MNLHEYQAKKLFADYGIPVPEGKTVSSPSDARAAAQELGGEVWLVKTQAHTGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV +  SL  V +    ILG TL+TKQTGP G  VN V VE G+DI RELYL
Sbjct: 58  -------GGVTLAKSLDEVEAAAEAILGMTLVTKQTGPEGLPVNLVLVEQGSDIARELYL 110

Query: 121 SLLVDR 126
             L+DR
Sbjct: 111 GALLDR 116


>gi|159485736|ref|XP_001700900.1| ATP citrate lyase, subunit A [Chlamydomonas reinhardtii]
 gi|158281399|gb|EDP07154.1| ATP citrate lyase, subunit A [Chlamydomonas reinhardtii]
          Length = 435

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 95/418 (22%), Positives = 146/418 (34%), Gaps = 63/418 (15%)

Query: 2   NIHEYQAKALLRKY-----NV--PVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            I EY AK LL+ +      +  P+   +    ++     +A   L     VVK  +  G
Sbjct: 5   KIREYDAKRLLKAHMKRLAGIDLPIQVVQFTANTNASDLLNANPWLASTKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D              I      L  T+           +    +E   
Sbjct: 65  QRGKNDLVGLNMDFS----------QAIDFATARLNRTVTVNGCTG---PITTFVIEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI-FKLLIDPLIGVTSEDVA 171
               E YLS+  +R    V+F  S  GG+ IEE        +   L  +P  G+    +A
Sbjct: 112 PHKDEYYLSITTNRNGWEVSF--SEAGGIHIEENWDKLRTVVLDTLDANPSGGLPEGALA 169

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            L     L  + R        + +  F D D SL+E+NP  +   G+   LD ++  DD 
Sbjct: 170 PLI--AGLPLELRPTLERFIASAFAVFHDLDCSLMEMNPWTLDSAGQPFPLDMRVELDDT 227

Query: 232 ALYRHLDIQELRDVSEEDSREI---------------EAKQHNLSYIALD--GNIGCMVN 274
           A YR      L     E                    EA   +L +  L+  G++  MV 
Sbjct: 228 AKYRSGGKWNLDGQELEFPLPFGRLLTPAEAAVSALDEATGASLKFTVLNPHGHVWLMVA 287

Query: 275 GAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS-------DSSVKGIL 325
           G G ++   D I   G A    N+ +  G  +  +  A  K +         D   + +L
Sbjct: 288 GGGASVIYTDTIGDLGYAEELGNYGEYSGAPNTAETYAYAKTVLDCATAHAGDGRPRALL 347

Query: 326 INIFGGIMRCDVLV---KGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLIAESG 375
             I GGI     +     GI++A+KE         + + +R  G N   G  L+   G
Sbjct: 348 --IGGGIANFTDVAATFTGIIAALKEKAAALQAAKVRIFVRRGGPNYQKGLELMRALG 403


>gi|156547848|ref|XP_001604320.1| PREDICTED: similar to ENSANGP00000012364 [Nasonia vitripennis]
          Length = 1087

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/368 (22%), Positives = 138/368 (37%), Gaps = 49/368 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             ++V + L      + E L      +Q 
Sbjct: 48  WLSSERLVVKPDQLIKRRGKLGL----------IKVNADLAQCQQWVAERLNKD---QQI 94

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E Y+ +   RT+  + F    +GG+DI +V      K 
Sbjct: 95  GKATGKLKTFIIEPFVPHKPEEEAYVCIYSHRTADTILF--HHEGGVDIGDVDA----KA 148

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     +  E   +   +  +    +        +LYK + D   + LEINPL++ 
Sbjct: 149 LKLEVPVDSDIPDESTITSRLLAHVANDKKPVIAKFIQSLYKLYVDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  + +LD     D  A +    D  E+       RD   E++   +          L+
Sbjct: 209 DD-SIYILDLAAKLDTTADFICRPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +   G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 268 ILNPSGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILGLM 327

Query: 317 -SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIG 367
             +    G ++ + GGI     +    KGI+ A+++     V+ +I + +R  G N   G
Sbjct: 328 TKERHPDGKVLIVGGGIANFTNVAATFKGIVKALQQFQPKLVEHDIKIFVRRAGPNYQEG 387

Query: 368 NRLIAESG 375
            R+I E G
Sbjct: 388 LRIIREVG 395


>gi|159027650|emb|CAO89514.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 394

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 116/295 (39%), Gaps = 37/295 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP-LYVVKSQIHAGGRGKGRF 59
           M++ EYQAK +  +  +P+     I         +K L  P   V+KSQ+ AGGRGK   
Sbjct: 1   MDLLEYQAKEIFAQVGIPILPSQPIQEP----GGLKRLNIPYPVVLKSQVRAGGRGKAGG 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +  A++   +                             G     +  E   +  +E++
Sbjct: 57  VKFVANTIDAIAAAH-----------------AIFHLPIAGEYPEVILAEARYNPQQEIF 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++L+D        + ++QGGMD++ +     + + +    P           L   + L
Sbjct: 100 LAILLDYHLQRPVLLGASQGGMDVDSLLATMQKVVIEERFSP------YLCRQLAVSMGL 153

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G        +   +Y  F  KD+ ++EINPL I + G +  LD KIS +D AL RHLD+
Sbjct: 154 RGSLIESISQILEKMYSLFVSKDLDIIEINPLGINEAGEVMALDGKISVNDAALARHLDL 213

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
             L     +            S I   G I  + NG GL     D +   G   A
Sbjct: 214 LALTPPQLQSP---------WSIIDQTGQIAVISNGQGLMSTVWDALASKGARLA 259


>gi|166365727|ref|YP_001658000.1| succinyl-CoA synthetase beta chain [Microcystis aeruginosa
           NIES-843]
 gi|166088100|dbj|BAG02808.1| succinyl-CoA synthetase beta chain [Microcystis aeruginosa
           NIES-843]
          Length = 394

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 37/295 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP-LYVVKSQIHAGGRGKGRF 59
           M++ EYQAK +  +  +P+     I         +K L  P   V+KSQ+ AGGRGK   
Sbjct: 1   MDLLEYQAKEIFAQVGIPILPSQPIHEP----GGLKRLNIPYPIVLKSQVRAGGRGKAGG 56

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +  A++   +                             G     +  E   +  +E++
Sbjct: 57  VKFVANTIDAIAAAH-----------------AIFHLPIAGEYPEVILAEARYNPQQEIF 99

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L++L+D        + ++QGGMD++ +     + + +    P           L   + L
Sbjct: 100 LAILLDYHLQRPVLLGASQGGMDVDSLLATMQKVVIEERFSP------YLCRQLAVSMGL 153

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           +G        +   +Y  F  KD+ ++EINPL I + G +  LD KIS +D AL RHLD+
Sbjct: 154 RGSLIESISQILEKMYSLFVSKDLDIIEINPLGINEAGEVMALDGKISVNDAALARHLDL 213

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
             L     +            S I   G I  + NG GL  +  D++   G   A
Sbjct: 214 LALTPPQLQSP---------WSIIDQTGRIAMISNGQGLMSSIWDVLAGQGAKLA 259


>gi|294953978|ref|XP_002787983.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239903108|gb|EER19779.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 194

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)

Query: 1   MNIHEYQAKALLRKYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           MN+  +Q       ++V  V K     + +  E   + L G   VVK+Q+  GGRG+G F
Sbjct: 1   MNLLHHQ-------FHVDAVPKCFYARNSNEVEDYARRLGGGDVVVKAQVLGGGRGRGHF 53

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           KE     +GGV + SS         ++L  +L+T+QTG +G     V + +   I+ E Y
Sbjct: 54  KE--NGFQGGVHIASSPSEARIVAEQMLNKSLVTRQTGLSGRMCKGVLLCEKLPIVAEKY 111

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            ++++DR  G    + S  GGM IEEVA ++P  + K+ ID   G+T+       + L  
Sbjct: 112 FAIMLDRGLGGPVMVMSKHGGMSIEEVAIEHPDAVTKIPIDVTTGLTTRQAEEAVEHLGF 171

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMS 204
            G            LY+ F   D +
Sbjct: 172 NGD--PSAMATLKGLYRTFVGADCT 194


>gi|319956330|ref|YP_004167593.1| ATP citrate lyase subunit 1 [Nitratifractor salsuginis DSM 16511]
 gi|319418734|gb|ADV45844.1| ATP citrate lyase subunit 1 [Nitratifractor salsuginis DSM 16511]
          Length = 439

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 90/431 (20%), Positives = 161/431 (37%), Gaps = 66/431 (15%)

Query: 3   IHEYQAKALLRKY------NVPVA-KGVVISSVHAAESAIK-----TLPGPLYVVKSQIH 50
           I EY  K L  K+            K V+++S        K      L     VVK  + 
Sbjct: 6   IREYDGKQLFAKHWNEYFDGFHYPFKSVLVTSADELRQKAKEHGFEWLNQEPLVVKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +    ++    TL++ Q G    R+    VE 
Sbjct: 66  FGKRGKNDLVLFKKEKPGDVTLEDAAKWIEE--KQSHDVTLLSGQHG----RLTHFIVEP 119

Query: 111 GADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
                  +E Y++              S +GGM++EE  ++   ++ ++ I+ +     E
Sbjct: 120 FTPHTQDQEYYIAATTVGEDD--VLYMSAEGGMEVEEGWEEKVNEV-RIPIN-MPEADIE 175

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                    ++  ++           +K F D   + LEINPL+++      +LD     
Sbjct: 176 KAIRANVPEDIPAESHEAFATFAIQFFKFFRDMHFAYLEINPLVLIGT-DAHILDLVARL 234

Query: 229 DDNALYRHLD---------IQELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVN 274
           DD A +   +            + + S E+    EA   + + + L      G I  MV 
Sbjct: 235 DDTAGFMMKEKWGDIEFPTAFGMEEQSPEEKAIAEADSKSGASLKLTVLNPQGRIWTMVA 294

Query: 275 GAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAA----FKIITSDSSVKGILINI 328
           G G ++   D I    G    AN+ +  GG    +        F ++T     +G ++ I
Sbjct: 295 GGGASVVYADTIADLAGVKDLANYGEYSGGPTTGETEFYAETIFDLMTRYPDPRGKILII 354

Query: 329 FGGIMRCDVLVK---GILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
            G I     + K   GI++A+++      + N  + +R  G N + G +           
Sbjct: 355 GGAIANFTDVAKTFTGIINALEKWAPKLKEHNTKIYVRRGGPNYEKGLQ----------- 403

Query: 381 AIDLDDAAQKI 391
             D+ DAA+++
Sbjct: 404 --DMKDAAERL 412


>gi|324537082|gb|ADY49489.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 159

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 1/158 (0%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +N+ EYQ+K LL  Y   + + +V SS   AE  ++      Y+VKSQ+ AGGRGKGRF 
Sbjct: 2   LNLQEYQSKKLLEDYGCCIQRFIVASSRDEAEQQMQDFNRRRYMVKSQVLAGGRGKGRFI 61

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  GGV V    +  +S + E++G  L+TKQTG  G  V  V + +   I RE YL
Sbjct: 62  GGRSDL-GGVAVAEGKQKALSLVEEMVGKILVTKQTGKKGLPVKKVLICEAVSIKRETYL 120

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL 158
           ++L+DR +     + S  GGMDIE VA   P+ +FK  
Sbjct: 121 AILMDRETNGPMVVYSPAGGMDIETVAATNPELVFKEP 158


>gi|152990401|ref|YP_001356123.1| ATP citrate synthase, subunit 1 [Nitratiruptor sp. SB155-2]
 gi|151422262|dbj|BAF69766.1| ATP citrate synthase, subunit 1 [Nitratiruptor sp. SB155-2]
          Length = 443

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 92/446 (20%), Positives = 169/446 (37%), Gaps = 69/446 (15%)

Query: 3   IHEYQAKALLRKY------NVPVA-KGVVISSVHAAESAIK-----TLPGPLYVVKSQIH 50
           I EY  K L  +        +    + V+++S    +   +      L     V K  + 
Sbjct: 6   IREYDGKKLFAQNWDKYFKGLKYPFESVLVTSGDELKKKAEEPGYEWLKTKPLVAKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +     +   +TL++ Q G     +    VE 
Sbjct: 66  FGKRGKNNLVLFKVNKPGDVTLEDAAKWIDEKRNQ--ETTLLSGQKG----VLTHFIVEP 119

Query: 111 GADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
                   E Y++      +  V ++ S  GGM++EE      +   K+ I+     + E
Sbjct: 120 FTPHSEDEEYYIAATTLDENYDVLYM-SAHGGMEVEENWDKVTEV--KIPIN----ASDE 172

Query: 169 DVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           ++  L       ++    +    +   N YK F D + + LEINP++I+ +  + +LD  
Sbjct: 173 EIEKLIKENIPADIPEDKKEVYANFAVNFYKFFRDLNFAYLEINPVVIVGD-NVYLLDLV 231

Query: 226 ISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGC 271
              DD A +   D+           + + S E+    EA   + + + L     +G I  
Sbjct: 232 ARLDDTAGFLMKDVWGDIEFPTPFGMPEKSPEEKAIAEADAKSGASLKLTILNPEGRIWT 291

Query: 272 MVNGAGLAMATMDIIK-LYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVK 322
           +V G G ++   D I  L GG    AN+ +  GG   D+     + +        D   +
Sbjct: 292 LVAGGGASVVYADTIADLAGGVSELANYGEYSGGPTTDETRFYTETVLDLMTRQKDPKGR 351

Query: 323 GILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES 374
             ++ I G I     + K   GI+ A ++       + + + +R  G N + G + I E+
Sbjct: 352 DKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNYEKGLKDIKEA 411

Query: 375 ----GLNVI---TAIDLDDAAQKIVH 393
               GL +        + D  +  V 
Sbjct: 412 ADKLGLPIKVFGPETHITDIVRMAVE 437


>gi|281209473|gb|EFA83641.1| putative ATP citrate synthase [Polysphondylium pallidum PN500]
          Length = 397

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 83/411 (20%), Positives = 154/411 (37%), Gaps = 64/411 (15%)

Query: 26  SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIRE 85
           +++    +A   L     VVK  +  G RGK             V + ++++     I+E
Sbjct: 10  TNLKEMVTAQPWLGNTKLVVKPDMLFGKRGKNNL----------VLLNANVEQADQFIKE 59

Query: 86  ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +   +    +G  G  V    VE       E YLS++  R    ++F  S  GGM+IEE
Sbjct: 60  RMNKEV--DISGKKG-PVTHFIVEPFVPHTVEYYLSIVAKRDGNTISF--SNVGGMEIEE 114

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
                        +D   G    D A+L ++++     R        N+YK F +     
Sbjct: 115 CWDHVK------TLDIPYG-EPIDAANLHELVDSNTSGREFIIQFIRNVYKIFEELSFHF 167

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYR---------------HLDIQEL--RDVSEE 248
           +E+NP  + ++G+   LD +   D+ A ++                   + L   +    
Sbjct: 168 IEMNPFTLDQDGKPFPLDMRGEVDECASFKCGSKWVVDGEPIQFPQPFGRALFPEETFVN 227

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD 306
           D  E       L+ +  +G I  ++ G G ++   D +    YG    ++ +  G  +++
Sbjct: 228 DIDEKTGASLKLTILNPNGRIWPVIAGGGASVIYADTVADLGYGHELGSYGEYSGDPNEE 287

Query: 307 KVAAAFKIITS------DSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKIN 352
                   + S      D   + +L  I GGI     +    KGI+ A+KE     +K N
Sbjct: 288 DTHKYASTMLSLATRNPDGRPRALL--IGGGIANFTDVAATFKGIIRAIKEYHEDILKAN 345

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVI-------TAIDLDDAAQKIVHAVK 396
           + + +R  G N   G + + E G  +          I++ +     +  +K
Sbjct: 346 LHIFVRRGGPNYQSGLQHMREIGHKLHIPIKVFGPEINMTNIVSMAIQTIK 396


>gi|195488393|ref|XP_002092296.1| GE14108 [Drosophila yakuba]
 gi|194178397|gb|EDW92008.1| GE14108 [Drosophila yakuba]
          Length = 1096

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 144/413 (34%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNNHGAGAATCRFATVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|195583780|ref|XP_002081694.1| GD25577 [Drosophila simulans]
 gi|194193703|gb|EDX07279.1| GD25577 [Drosophila simulans]
          Length = 1095

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 144/413 (34%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNTHGAGAATCRFATVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|51092031|gb|AAT94429.1| RE70805p [Drosophila melanogaster]
          Length = 1112

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 144/413 (34%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNTHGAGAATCRFSTVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|260814543|ref|XP_002601974.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae]
 gi|229287278|gb|EEN57986.1| hypothetical protein BRAFLDRAFT_98927 [Branchiostoma floridae]
          Length = 1097

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 84/389 (21%), Positives = 143/389 (36%), Gaps = 62/389 (15%)

Query: 21  KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI 80
             +V S+          +     V K       RGK             ++V ++L  V 
Sbjct: 39  DFLVASNP--------WMNTERLVAKPDQLIKRRGKLGL----------IKVNATLDEVK 80

Query: 81  SDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQ 138
             ++E +   +     G +   +    VE         E Y+ +   R    + F    +
Sbjct: 81  QWVKERMNKEMK---IGKSTGLLKNFVVEPFVPHKQEEEFYVCIYAHRDGETILF--HHE 135

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID--GGDLFPNLYK 196
           GG+DI +V          + ++ LIG +   +  L   L  +  A           NLY 
Sbjct: 136 GGVDIGDVDAKA------VKLEVLIGESP-SLEDLQKKLVHKAPAPKQPVLAQFISNLYT 188

Query: 197 AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD----------VS 246
            + D   + LEINPL++   G + +LD     D  A +         D            
Sbjct: 189 VYTDLYFTYLEINPLVVTDEG-VYILDLAAKIDQTAEFICKAKWGELDFPPPFGREAYPE 247

Query: 247 EEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGG 301
           E    +++AK      L+ +   G I  MV G G ++   D I   GGA   AN+ +  G
Sbjct: 248 EAYIADLDAKSGASLKLTILNPKGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSG 307

Query: 302 GADQDKVAAAFKIITS----DSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKI--- 351
              + +     K I S    +   +G ++ I GGI     +    KGI+ A+K+ +    
Sbjct: 308 APSEGQTYEYAKTILSLMTREKHAEGKVLIIGGGIANFTNVAATFKGIVRALKDYQAKLK 367

Query: 352 --NIPLVMRLEGANVDIGNRLIAESGLNV 378
             N+ + +R  G N   G R++ E G ++
Sbjct: 368 EYNVTVFVRRGGPNYQEGLRIMRELGQHI 396


>gi|281363477|ref|NP_725514.2| ATP citrate lyase, isoform F [Drosophila melanogaster]
 gi|272432504|gb|AAM70940.2| ATP citrate lyase, isoform F [Drosophila melanogaster]
          Length = 1095

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 144/413 (34%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNTHGAGAATCRFSTVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|281363473|ref|NP_523755.2| ATP citrate lyase, isoform D [Drosophila melanogaster]
 gi|281363475|ref|NP_001137674.2| ATP citrate lyase, isoform E [Drosophila melanogaster]
 gi|28372804|gb|AAD34754.2| LD21334p [Drosophila melanogaster]
 gi|272432502|gb|AAF58082.2| ATP citrate lyase, isoform D [Drosophila melanogaster]
 gi|272432503|gb|ACL83128.2| ATP citrate lyase, isoform E [Drosophila melanogaster]
          Length = 1112

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 144/413 (34%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNTHGAGAATCRFSTVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|321461384|gb|EFX72417.1| hypothetical protein DAPPUDRAFT_308310 [Daphnia pulex]
          Length = 1074

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 134/371 (36%), Gaps = 48/371 (12%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK    ++  D             V   + E +   +   Q 
Sbjct: 48  WLETEKLVVKPDQLIKRRGKLGLIKVNVDFT----------QVQEWVNERIDKDV---QV 94

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E Y+ +  +R       +   QGG+DI +V     +K 
Sbjct: 95  GKATGKLRRFIIEPFIAHKDEEEAYVCVYSERNGD--VILFHHQGGVDIGDVD----EKA 148

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            +L ++     + ED+ S   +       +    D    LY  + D   + +EINPL++ 
Sbjct: 149 LRLSVEIDNKPSREDILSGLLVNVTDNAKKERVADYIVALYDVYVDLHFTYMEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREIE-----AKQHNLS 261
             G + +LD     D  A +                RD   E++   +          L+
Sbjct: 209 AEGGVFMLDLAAKIDATADFLCRTKWGSIEYPPPFGRDAYPEEAYIADLDSKSGASLKLT 268

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I S  
Sbjct: 269 ILNRAGRIWTMVAGGGASVIYSDTICDLGGAAELANYGEYSGAPSEQQTYEYAKTILSLM 328

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAV-----KEVKINIPLVMRLEGANVDIG 367
             D    G ++ I GGI     +    KGI+ A+     K V   + + +R  G N   G
Sbjct: 329 TQDKHPDGKVLIIGGGIANFTNVAATFKGIVKALLQYQTKLVDHKVSIFVRRAGPNYQEG 388

Query: 368 NRLIAESGLNV 378
            R++ E G N+
Sbjct: 389 LRVMREVGANL 399


>gi|152992137|ref|YP_001357858.1| ATP citrate synthase subunit 1 [Sulfurovum sp. NBC37-1]
 gi|151423998|dbj|BAF71501.1| ATP citrate synthase, subunit 1 [Sulfurovum sp. NBC37-1]
          Length = 436

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/420 (21%), Positives = 156/420 (37%), Gaps = 64/420 (15%)

Query: 3   IHEYQAKALLRK----------YNVPVAKGVVISSVHAAESAIK-----TLPGPLYVVKS 47
           I EY  KA+  +          Y     K V++SS        K      L     V K 
Sbjct: 6   IREYDGKAIFARHWNEYFDGFHYGF---KSVLVSSGDELREKAKEHGFEWLNQEPLVAKP 62

Query: 48  QIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
            +  G RGK        +  G V +E + K +    ++    TL++ + G          
Sbjct: 63  DMLFGKRGKNDLVLFRVEKPGDVTLEDAAKWIDE--KQSHDVTLLSGEKGHLTH----FI 116

Query: 108 VEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           VE        +E Y+S              S +GGM++EE      +K+ ++ I     +
Sbjct: 117 VEPFTPHTQDQEYYISATTVGEDD--VLFMSAEGGMEVEEGWD---EKVNEVHIPIN--M 169

Query: 166 TSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
              D+  +       ++  + +          +K + D + + LEINP++++  G + +L
Sbjct: 170 PDADMEKMVKSHIPADIPDENKTAFASFAIQFFKFYRDMNFAYLEINPIVMLDGGEMAIL 229

Query: 223 DSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIALD-----GN 268
           D     DD A +   D            + D+S+E+    EA   + + + L      G 
Sbjct: 230 DLVARLDDTAGFMMKDAWGDIEFPTAFGMEDMSDEEKAIAEADSKSGASLKLTILNPMGR 289

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA----FKIITSDSSVK 322
           I  MV G G ++   D I  + G    AN+ +  GG    +        F ++T     +
Sbjct: 290 IWTMVAGGGASVVYADTIADFAGVEDLANYGEYSGGPTTGETKFYAETIFDLMTRYDDPR 349

Query: 323 GILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANVDIGNRLIAES 374
           G ++ I G I     + K   GI+ A      K  +    + +R  G N + G + I E+
Sbjct: 350 GKVLIIGGAIANFTDVAKTFTGIIQAFEIYADKLKEHKTKIYVRRGGPNYEKGLKDIKEA 409


>gi|62734470|gb|AAX96579.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 325

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 131/343 (38%), Gaps = 55/343 (16%)

Query: 2   NIHEYQAKALLRKY-----NV--PVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++      +   +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   +  V   ++E LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDIAQVKEFVKERLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T +  A 
Sbjct: 112 PHDQEYYLSIVSERLGSTISF--SECGGIEIEENW----DKVKTIFLSTEKPMTPDACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+  AR   GD    ++  F D D S LE+NP  I+ NG    LD +   DD A
Sbjct: 166 LIATLPLE--ARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIV-NGEPYPLDMRGELDDTA 222

Query: 233 LY---RHLDIQELRDVSEEDS--------REIEAKQHNLSYIALDGNIGCMVNGAGLAMA 281
            +   R  +I      S E S          + +     + +   G I  MV G G ++ 
Sbjct: 223 AFKTSRSGEISNSHYHSVEFSVLQKALSMTWMRSASLKFTVLNPKGRIWTMVAGGGASVI 282

Query: 282 TMDIIK-----------LYGGAPANFLDVGGGADQDKVAAAFK 313
             D              L GG  ANF DV  GA    +  A +
Sbjct: 283 YADTCATADPDGRKRALLIGGGIANFTDV--GATFSGIIRALR 323


>gi|2624396|emb|CAA05718.1| succinyl-CoA synthetase beta sub-unit [Rhizobium leguminosarum]
          Length = 125

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MNIHEYQAKALL+ Y  PVA+GV I  V  AE+A K+LPGPLYVVKSQIHAGGRGKG+FK
Sbjct: 1   MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           EL  ++KGGVR+  S+  V++  +E+LG+TL+T QTG    +VN +Y+EDGADI RELY 
Sbjct: 61  ELSPEAKGGVRLAKSIDEVVAHAKEMLGNTLVTAQTGEAXKQVNRLYIEDGADIARELYC 120

Query: 121 SLLVD 125
           SLLVD
Sbjct: 121 SLLVD 125


>gi|116335002|ref|YP_802497.1| succinyl-CoA synthetase beta subunit [Candidatus Carsonella ruddii
           PV]
 gi|116235283|dbj|BAF35131.1| succinyl-CoA synthetase beta subunit [Candidatus Carsonella ruddii
           PV]
          Length = 345

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 91/361 (25%), Positives = 166/361 (45%), Gaps = 49/361 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN+ E+++K +L KYN+P+    + S+    ++         Y+ K Q++   R K    
Sbjct: 1   MNLCEFESKKILFKYNLPILNSYLTSNYTYVKN---------YIYKIQVNLNYRKK---- 47

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGG+ +  S   +    ++        K+T     ++    +E  + I  E +L
Sbjct: 48  ------KGGILIPHSKNELKVFYKKW-------KKTKFNNKKIKYFLLEKISKIEIEFFL 94

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S  V   +  +  I S +GG+++E   K+Y  K+          +    +       ++ 
Sbjct: 95  SFFVHDNN--LTIIISNKGGINVELENKNYFLKLNIKTFIVFYSIYDYLL-----NCKIF 147

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
            +  +   +L   LYK     ++ L+EINPLI+ K  ++ +LD KI              
Sbjct: 148 KKNILSILNLVFKLYKIIICNNLLLVEINPLIVYK-KKIYILDCKIIT------------ 194

Query: 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
               + +E+  +  +    ++YI L GNI C+VNGAGLA+ T+DI+       ANF+D+ 
Sbjct: 195 --EKIKKENFSDNISNILKINYIKLKGNICCIVNGAGLALKTLDILSFNNLKCANFIDLS 252

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
           G   +  +    K+I  D  +  +LINIFGGI+ C+ ++ G L+ +     N  ++++L 
Sbjct: 253 GSITEVNINNLLKVILIDKKLNFLLINIFGGIVSCEKILIGFLN-IFYYDFNFKIIIKLN 311

Query: 361 G 361
           G
Sbjct: 312 G 312


>gi|307109538|gb|EFN57776.1| hypothetical protein CHLNCDRAFT_56081 [Chlorella variabilis]
          Length = 458

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 91/441 (20%), Positives = 154/441 (34%), Gaps = 83/441 (18%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+ +        +P+A   V   ++     +A   +     VVK     G
Sbjct: 5   KIREYDSKRLLKAHIARLAGLQLPIAVAQVKEATNFAELVAANPWMNQTQLVVKPDCLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     L  D+ G  +   +                +    G  G R+N   VE   
Sbjct: 65  KRGKHDLVGLKLDATGAQQFIQA------------RMNKVVDMDGTVG-RINTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL +   R +  ++F  S  GGM+IEE       K+  + I      +S  +A 
Sbjct: 112 AHAEEYYLCIQSGRLADTLSF--SEFGGMEIEENW----DKVRTVSIPTGAEPSSAPLAP 165

Query: 173 LCDML----------------------ELQGQARIDGGDLFPN------LYKAFCDKDMS 204
           L   L                       L+                   L   + D D +
Sbjct: 166 LLSTLPLELRPTWRLSSRPRTRQAGGGGLRWAGEERCNSRLGTGFGCAVLVAVYLDLDFT 225

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD--------IQELRDVSEEDSR----- 251
           LLE+NP  + + G+   LD +   DD A +R           +   R ++ +++R     
Sbjct: 226 LLEMNPFTLDQAGKPFPLDMRGELDDTAAFRSAKKWGDVEFPLPFGRTMTPQEARIHSLD 285

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVA 309
           E       LS +   G I  MV G G ++   D +   G A    N+ +  GG +  +  
Sbjct: 286 EATGASLKLSILNPRGRIWTMVAGGGASVIYADTVADLGYAEELGNYAEYSGGPNTAETY 345

Query: 310 AAFKIIT----SDSSVKGILINIFGGIMRCDVLV---KGILSAVKEVK-----INIPLVM 357
              + +     + +  +G  + + GGI     +    KGI+ A +E +       + + +
Sbjct: 346 QYARTLLDAATAYADGRGRALIVGGGIANFTDVAATFKGIIQAFREKQEAIKAARMKIFV 405

Query: 358 RLEGANVDIGNRLIAESGLNV 378
           R  G N   G  ++   G  +
Sbjct: 406 RRGGPNYQAGLEMMRRLGDEI 426


>gi|149195270|ref|ZP_01872359.1| CoA_binding Ligase_CoA Citrate_synt [Caminibacter mediatlanticus
           TB-2]
 gi|149134612|gb|EDM23099.1| CoA_binding Ligase_CoA Citrate_synt [Caminibacter mediatlanticus
           TB-2]
          Length = 444

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 89/428 (20%), Positives = 160/428 (37%), Gaps = 66/428 (15%)

Query: 3   IHEYQAKALLRKY------NVPVA-KGVVISSVHAAESAI-----KTLPGPLYVVKSQIH 50
           I EY  K L  +        +    + V+++S    +        + L     V K  + 
Sbjct: 6   IREYDGKRLFNENWDKYFSGLEYPFESVLVTSGEELKEIANKPGYEWLKEKPLVAKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +    +    + L++ Q G     +    VE 
Sbjct: 66  FGKRGKNNLVLFKVNKPGDVTLEDAAKWIDE--KRAGKTKLLSGQEG----VLTHFIVEP 119

Query: 111 GADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
                   E Y++      +  V ++ S  GGM++EE      +   K+ ID     T E
Sbjct: 120 FTPHSEDEEYYIAATTFDENYDVLYM-SAHGGMEVEENWDKVTEV--KIPID----ATDE 172

Query: 169 DVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           ++  +       ++    +    +   N YK F D + + LEINP++I+ N ++ +LD  
Sbjct: 173 EIEKIIKENIPADIPEDKKDTYANFAINFYKFFRDLNFAYLEINPVVIVGN-KVYLLDLV 231

Query: 226 ISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQH-----NLSYIALDGNIGC 271
              DD A +   D            + + S E+    EA         L+ +   G I  
Sbjct: 232 ARLDDTAGFLMKDKWGDIEFPTPFGMPEKSPEEKAIAEADAKTGASLKLTVLNPKGRIWT 291

Query: 272 MVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSSVK 322
           +V G G ++   D I    G     AN+ +  GG   D+     + +        D   +
Sbjct: 292 LVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDEKGR 351

Query: 323 GILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES 374
             ++ I G I     + K   GI+ A ++       + + + +R  G N + G + I E+
Sbjct: 352 DKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNYEKGLKDIKEA 411

Query: 375 ----GLNV 378
               GL +
Sbjct: 412 AERLGLPI 419


>gi|195334759|ref|XP_002034044.1| GM20101 [Drosophila sechellia]
 gi|194126014|gb|EDW48057.1| GM20101 [Drosophila sechellia]
          Length = 1095

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 145/413 (35%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++      +    +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNTHGADAATCRFATVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|125811843|ref|XP_001362021.1| GA20986 [Drosophila pseudoobscura pseudoobscura]
 gi|54637198|gb|EAL26601.1| GA20986 [Drosophila pseudoobscura pseudoobscura]
          Length = 1087

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 137/369 (37%), Gaps = 50/369 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK            GV+   S + V   I E +      ++ 
Sbjct: 49  WLLTTPLVVKPDQLIKRRGKLGLI--------GVK--KSFEQVKQWIGERINKD---QKI 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E+Y+ +   R++  + F    QGG+DI +V      K 
Sbjct: 96  GNAVGKLRNFIIEPFLPHTDAEEMYVCIYSHRSADTILFY--HQGGVDIGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     ++  DV S           R         LY  F D   + LEINPL++ 
Sbjct: 150 VKLDVPVNSDLSLADVKSKLLKEVKDASQRERIAKFIGALYATFVDLYFTYLEINPLVVT 209

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  L +LD     D  A +       E+       RD   E++   +          L+
Sbjct: 210 AD-NLYILDLAAKLDSTADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 268

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 269 ILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLM 328

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDI 366
             S     G ++   GGI     +    +GI++A++E     V+ N+ + +R  G N   
Sbjct: 329 TSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQE 388

Query: 367 GNRLIAESG 375
           G R + + G
Sbjct: 389 GLRRMRDFG 397


>gi|194756204|ref|XP_001960369.1| GF13329 [Drosophila ananassae]
 gi|190621667|gb|EDV37191.1| GF13329 [Drosophila ananassae]
          Length = 1097

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 85/416 (20%), Positives = 152/416 (36%), Gaps = 61/416 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVIS-SVHAAESAIK--TLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++ +   ++ ++    L     VVK       
Sbjct: 6   ITEASGKDILNRHLSLHGAGAATCRFATVNATTDWSKLSVDHPWLLTTPLVVKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL I     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDIPVNASLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S   +     + +         LY  + D   + LEINPL++  +  L +LD     D 
Sbjct: 166 KSKLLVEVKDAKVKERIAKFISALYTTYVDLYFTYLEINPLVVTAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       E+       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPAGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G  +
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFGTTL 400


>gi|119114534|ref|XP_319323.3| AGAP010156-PA [Anopheles gambiae str. PEST]
 gi|116118462|gb|EAA13829.3| AGAP010156-PA [Anopheles gambiae str. PEST]
          Length = 1082

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/377 (22%), Positives = 142/377 (37%), Gaps = 51/377 (13%)

Query: 29  HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
                    L     VVK       RGK             + V  +L  V + + E +G
Sbjct: 40  QQLVQDNPWLETSPLVVKPDQLIKRRGKLGL----------IAVNKNLAQVKTWVNERMG 89

Query: 89  STLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
                ++ G    ++    +E         E Y+ +   RT+  + F    QGG+DI +V
Sbjct: 90  KD---QKIGNATGKLRNFIIEPFVPHKDNEEAYVCIYSHRTADTILFY--HQGGVDIGDV 144

Query: 147 AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLL 206
                 K  KL +     VT  ++  +  + E+    +    +   NLYK + D   + L
Sbjct: 145 DA----KALKLEVPVGTDVTMAEIEKVL-LTEISSAKKKRVANFVYNLYKMYVDLYFTYL 199

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE---- 254
           EINPL++  +  + +LD     D  A +       E+       RD   E++   +    
Sbjct: 200 EINPLVVTDD-SIYILDLAAKVDATADFICRPKWGEIDYPPPFGRDAFPEEAYIADLDAK 258

Query: 255 -AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA 311
                 L+ +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +    
Sbjct: 259 SGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEY 318

Query: 312 FKIIT-----SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMR 358
            K I      S     G ++   GGI     +     GI++A+++     ++ N+ + +R
Sbjct: 319 AKTILSLMTSSPKHPDGKVLITGGGIANFTNVAATFSGIITALRDYQQKLIEHNVSIFVR 378

Query: 359 LEGANVDIGNRLIAESG 375
             G N   G R + E G
Sbjct: 379 RAGPNYQEGLRKMREIG 395


>gi|237874159|ref|NP_001153852.1| ATP citrate lyase [Acyrthosiphon pisum]
          Length = 1092

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 135/376 (35%), Gaps = 50/376 (13%)

Query: 29  HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
                    L     V K       RGK    ++  D  G              I E LG
Sbjct: 40  EDLVLDNPWLKAESLVAKPDQLIKRRGKLGLIKVKTDYSG----------AKQWILERLG 89

Query: 89  STLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
                +Q G    ++    +E         E Y+ +   R +  + F    +GG+DI +V
Sbjct: 90  KD---QQIGRANGKLKNFIIEPFIPHKDEEEAYVCIYSHRHADTILF--HHEGGVDIGDV 144

Query: 147 AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLL 206
                 K  KL +     VT E +     + ++    +         LYK + +   + L
Sbjct: 145 DA----KALKLEVPIGQSVTEEQILEKL-LTKVSPAKQKTIATFIVALYKMYVNLYFTYL 199

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREIEAKQH 258
           EINPL++  +  + +LD     D  A +                RD   E++   +    
Sbjct: 200 EINPLVVTDSA-IYILDLAAKIDSTADFICRASWGEIEYPPPFGRDAFPEEAYIADLDAK 258

Query: 259 NLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA 311
           + + + L      G I  MV G G ++   D I  YGGA   AN+ +  G   + +    
Sbjct: 259 SGASLKLTILNKKGRIWTMVAGGGASVIYADTICDYGGASELANYGEYSGAPSEQQTYEY 318

Query: 312 FKIITS----DSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRL 359
            K I S    +    G ++   GGI     +    KGI++A+ E     +  NI + +R 
Sbjct: 319 AKTILSLMTQEKHPDGKVLITGGGIANFTNVAATFKGIVTALTEYQTKILDHNITIYVRR 378

Query: 360 EGANVDIGNRLIAESG 375
            G N   G R+I E G
Sbjct: 379 AGPNYQEGLRIIREVG 394


>gi|157105391|ref|XP_001648848.1| ATP-citrate synthase [Aedes aegypti]
 gi|108880117|gb|EAT44342.1| ATP-citrate synthase [Aedes aegypti]
          Length = 1127

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 140/369 (37%), Gaps = 51/369 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +  +             V   + E +G     ++ 
Sbjct: 48  WLETTPLVVKPDQLIKRRGKLGLIAVNKNFT----------QVKQWVDERMGKD---QKV 94

Query: 97  GPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E Y+ +   RT+  + F    QGG+DI +V      K 
Sbjct: 95  GNATGKLRNFIIEPFVPHKDNEEAYVCIYSHRTADTILFY--HQGGVDIGDVD----SKA 148

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     VT E +  +  + E+    +        NLYK + D   + LEINPL++ 
Sbjct: 149 LKLDVPVGQDVTLESIEKVL-LTEVAAAKKKRVASFIYNLYKLYVDLYFTYLEINPLVVT 207

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
           ++  + +LD     D  A +       E+       RD   E++   +          L+
Sbjct: 208 ES-SIYILDLAAKIDATADFVCRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 266

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 267 ILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLM 326

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDI 366
             S    +G ++   GGI     +     GI++A++E     ++ N+ + +R  G N   
Sbjct: 327 TSSPKHPQGKVLITGGGIANFTNVAATFSGIITALREFQQKLIEHNVSIFVRRAGPNYQE 386

Query: 367 GNRLIAESG 375
           G R + E G
Sbjct: 387 GLRKMREIG 395


>gi|195171228|ref|XP_002026409.1| GL20648 [Drosophila persimilis]
 gi|194111311|gb|EDW33354.1| GL20648 [Drosophila persimilis]
          Length = 1069

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 137/369 (37%), Gaps = 50/369 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK            GV+   S + V   I E +      ++ 
Sbjct: 49  WLLTTPLVVKPDQLIKRRGKLGLI--------GVK--KSFEQVKQWIGERINKD---QKI 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E+Y+ +   R++  + F    QGG+DI +V      K 
Sbjct: 96  GNAVGKLRNFIIEPFLPHTDAEEMYVCIYSHRSADTILFY--HQGGVDIGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     ++  DV S           +         LY  F D   + LEINPL++ 
Sbjct: 150 VKLDVPVNSDLSLADVKSKLLKEVKDASQKERIAKFIGALYATFVDLYFTYLEINPLVVT 209

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  L +LD     D  A +       E+       RD   E++   +          L+
Sbjct: 210 AD-NLYILDLAAKLDSTADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 268

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 269 ILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLM 328

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDI 366
             S     G ++   GGI     +    +GI++A++E     V+ N+ + +R  G N   
Sbjct: 329 TSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQE 388

Query: 367 GNRLIAESG 375
           G R + + G
Sbjct: 389 GLRRMRDFG 397


>gi|195121624|ref|XP_002005320.1| GI20417 [Drosophila mojavensis]
 gi|193910388|gb|EDW09255.1| GI20417 [Drosophila mojavensis]
          Length = 1097

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 80/369 (21%), Positives = 135/369 (36%), Gaps = 50/369 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +  +           + V   I E +      ++ 
Sbjct: 49  WLLTTPLVVKPDQLIKRRGKLGLIGVKKNF----------EEVKQWIGERINKD---QKI 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E+Y+ +   R++  + F    QGG+DI +V      K 
Sbjct: 96  GNAVGKLRNFIIEPFIPHTEAEEMYVCIYSHRSADTILFY--HQGGVDIGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     ++  DV +           +         LY  F D   + LEINPL++ 
Sbjct: 150 VKLDVKVDSTLSLADVKTTLLKAITDASKKERIAKFIYGLYATFADLYFTYLEINPLVVT 209

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  L +LD     D  A +       E+       RD   E++   +          L+
Sbjct: 210 AD-NLYILDLAAKLDSTADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 268

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 269 ILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILNLM 328

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDI 366
             S     G ++   GGI     +    +GI++A++E     V+ N+ + +R  G N   
Sbjct: 329 TSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQE 388

Query: 367 GNRLIAESG 375
           G R + + G
Sbjct: 389 GLRRMRDFG 397


>gi|167518137|ref|XP_001743409.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778508|gb|EDQ92123.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1085

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 95/414 (22%), Positives = 156/414 (37%), Gaps = 65/414 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKG-------VVISSVH----AAESAIKT-LPGPLYVVKSQIH 50
           I+E + K LL ++   + +G       +V    H        A    L     V K    
Sbjct: 6   IYECEGKRLLAQW---LPEGTPGRDNLLVADFAHGFNWETIEAAHPFLSKTELVAKPDQL 62

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
              RGK             V+V+ SL    + ++E +   +   +T      +N   +E 
Sbjct: 63  IKRRGKLGL----------VKVKLSLDQAKTWVKEHMDKEISIGKTTGK---LNHFVIEP 109

Query: 111 GADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
                   E YL +   R    + F    +GG+D+ +V      K  KL++D     T E
Sbjct: 110 FVAHTDSDEHYLCIFAGREGNTIMF--CHEGGVDVGDVDA----KAAKLVLDIDEMPTEE 163

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            + S     +L             NLYK F D   + LEINP++++ +  L VLD     
Sbjct: 164 KIKSTLFA-QLPADRHALIATFIVNLYKTFLDLHFTYLEINPIVVV-DNELYVLDLAAKL 221

Query: 229 DDNALYRHLDIQEL--------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNG 275
           D  A Y   D            RD   E++   E    + + + L     +G I  MV G
Sbjct: 222 DQTAEYLCNDKWGNISFPPPFGRDALPEEAYIAELDSKSGASLKLTILNAEGRIWTMVAG 281

Query: 276 AGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIF 329
            G ++   D I   GG    AN+ +  G   + +     K I       +  +G ++ I 
Sbjct: 282 GGASVVYSDTICDLGGSTELANYGEYSGAPSESQTFEYAKTILTLMTKQAHPEGKVLIIG 341

Query: 330 GGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
           GGI     +    KGI+ A+++      + NI + +R  G N   G + + ++G
Sbjct: 342 GGIANFTNVASTFKGIIRALEDFAAIIKEHNIRIFVRRGGPNFQEGLKRMRDAG 395


>gi|194882681|ref|XP_001975439.1| GG22311 [Drosophila erecta]
 gi|190658626|gb|EDV55839.1| GG22311 [Drosophila erecta]
          Length = 1095

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 83/413 (20%), Positives = 145/413 (35%), Gaps = 61/413 (14%)

Query: 3   IHEYQAKALLRKY------NVPVAKGVVISSVHAAESAI---KTLPGPLYVVKSQIHAGG 53
           I E   K +L ++           +   ++S             L     V K       
Sbjct: 6   ITEASGKDILNRHLNNHGAGAATCRFATVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT-GPTGSRVNCVYVEDGA 112
           RGK     +  +                 +++ +G  L   Q  G    ++    +E   
Sbjct: 66  RGKLGLIGVKKNF--------------EQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+ +   R +  + F    QGG+DI +V      K  KL +     ++  DV
Sbjct: 112 PHTDAEEMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSSLSLADV 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            S           +         LY  + D   + LEINPL+++ +  L +LD     D 
Sbjct: 166 KSKLLKEVKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVIAD-NLYILDLAAKLDS 224

Query: 231 NALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAG 277
            A +       ++       RD   E++   +          L+ +  +G I  MV G G
Sbjct: 225 TADFICRPKWGDIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGG 284

Query: 278 LAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFG 330
            ++   D I   GGA   AN+ +  G   + +     K I      S     G ++   G
Sbjct: 285 ASVIYSDTICDLGGATELANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGG 344

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A++E     V+ N+ + +R  G N   G R + + G
Sbjct: 345 GIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFG 397


>gi|66530142|ref|XP_623083.1| PREDICTED: ATP-citrate synthase isoform 1 [Apis mellifera]
          Length = 1086

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 87/370 (23%), Positives = 147/370 (39%), Gaps = 53/370 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             ++V + L +V   I E +      +Q 
Sbjct: 48  WLQTERLVVKPDQLIKRRGKLGL----------IKVNADLATVKQWIAERMNKD---QQV 94

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G T  ++    +E         E Y+ +   R +  + F    +GG+DI +V        
Sbjct: 95  GKTTGKLRTFIIEPFIPHKQEEEAYVCIFSHRKADTILF--HHEGGVDIGDVDAKA---- 148

Query: 155 FKLLIDPLIGVTSEDVASLCDML--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI 212
             L +D  +G  + + +++ + L   +    +   G+   +LYK +     + LEINPL+
Sbjct: 149 --LKLDIAVGEEAPNRSTIIEKLLINVTDDKKEIIGNFIESLYKLYVTLYFTYLEINPLV 206

Query: 213 IMKNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIEAKQHNLSYIA 264
           I +N ++ +LD     D  A +    D  E+       RD   E++   +    + + + 
Sbjct: 207 ITEN-KIYILDLAAKLDTTADFICRPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLK 265

Query: 265 LD-----GNIGCMVNGAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITS 317
           L      G I  MV G G ++   D I   G     AN+ +  G   + +     K I S
Sbjct: 266 LTILNPAGRIWTMVAGGGASVIYSDTICDLGVANELANYGEYSGAPSEQQTYEYAKTILS 325

Query: 318 ----DSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVD 365
               +   +G ++ I GGI     +    KGI+ A++E     V  NI + +R  G N  
Sbjct: 326 LMTKEKRKEGKVLIIGGGIANFTNVAATFKGIVKALQEYQPKLVDHNIQIFVRRAGPNYQ 385

Query: 366 IGNRLIAESG 375
            G R+I E G
Sbjct: 386 EGLRIIREVG 395


>gi|170029202|ref|XP_001842482.1| ATP-citrate synthase [Culex quinquefasciatus]
 gi|167881585|gb|EDS44968.1| ATP-citrate synthase [Culex quinquefasciatus]
          Length = 1096

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 138/369 (37%), Gaps = 51/369 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +                V   + E +G     ++ 
Sbjct: 50  WLETTPLVVKPDQLIKRRGKLGLIAVNKKFP----------DVKKWVDERMGKD---QKV 96

Query: 97  GPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E Y+ +   RT+  + F    QGG+DI +V      K 
Sbjct: 97  GNATGKLRNFIIEPFVPHKDNEEAYVCIYSHRTADTILFY--HQGGVDIGDVDA----KA 150

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     VT+E +  +  + E+    +        NLYK + D   + LEINPL++ 
Sbjct: 151 LKLEVPVGTDVTAESIEKVL-LTEVAAGKKKRIASFVYNLYKLYVDLYFTYLEINPLVVT 209

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  + +LD     D  A +       E+       RD   E++   +          L+
Sbjct: 210 DSA-IYILDLAAKVDATADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 268

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 269 ILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTILSLM 328

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDI 366
             S     G ++   GGI     +     GI++A++E     ++ N+ + +R  G N   
Sbjct: 329 TSSPKHKDGKVLITGGGIANFTNVAATFSGIITALREFQQRLIEHNVSIFVRRAGPNYQE 388

Query: 367 GNRLIAESG 375
           G R + E G
Sbjct: 389 GLRKMREIG 397


>gi|291237585|ref|XP_002738714.1| PREDICTED: acly protein-like [Saccoglossus kowalevskii]
          Length = 1092

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 157/416 (37%), Gaps = 63/416 (15%)

Query: 3   IHEYQAKALLRKY----NVPVAKGVVISSVHAAESAIK---TLPGPLYVVKSQIHAGGRG 55
           I E   K LL KY    +    K  V++         +    L     VVK       RG
Sbjct: 6   IREATGKGLLNKYLGYEDAATTKFAVLTEDTDWNQLTQEHPWLLTEKLVVKPDQLIKRRG 65

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI- 114
           K    E+  D  G          V   +   LGS +   Q G     +    +E      
Sbjct: 66  KLGLIEVNTDLNG----------VKEWVSTRLGSEI---QIGAASGLLKTFIIEPFVAHK 112

Query: 115 -LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              E+Y+ +   R S  + F    +GG+DI +V     +  F++ +D  + VT+++V   
Sbjct: 113 PEDEMYVCIYSSRNSDTILFY--HEGGVDIGDVDTKAVK--FEVQVDFDMVVTADEVKQK 168

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
             ++++  + +         LYK +     + LEINPL++    ++ VLD     D  A 
Sbjct: 169 L-LMKVPKEKQDMVAGFIVALYKQYTALYFTYLEINPLVVTD--KIYVLDLAAKLDQTAE 225

Query: 234 YRHLDIQELRDVSEEDSREIEA---------------KQHNLSYIALDGNIGCMVNGAGL 278
           +      +  D++       EA                   L+ +  +G I  MV G G 
Sbjct: 226 FICK--VKWGDITFPPPFGREAFPEEAYIADLDAKSGASLKLTILNPNGRIWTMVAGGGA 283

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS------DSSVKGILINIFG 330
           ++   D I   GGA   AN+ +  G   + +     K +          S + ILI I G
Sbjct: 284 SVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAKTVLGLMTRRPHPSGEKILI-IGG 342

Query: 331 GIMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAESGLNV 378
           GI     +    KGI+ A+KE +  +      + +R  G N   G R++ E G N+
Sbjct: 343 GIANFTNVAATFKGIVRALKEYQQKLKDVNASVYVRRGGPNYQEGLRVMRELGQNL 398


>gi|225851245|ref|YP_002731479.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage
           enzyme) [Persephonella marina EX-H1]
 gi|225645643|gb|ACO03829.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage
           enzyme) [Persephonella marina EX-H1]
          Length = 436

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 93/447 (20%), Positives = 167/447 (37%), Gaps = 69/447 (15%)

Query: 3   IHEYQAKALLRK-----------YNVPVAKGVVISSVHAAESAIK---TLPGPLYVVKSQ 48
           I EY  K +L +           Y+    K V+I+     +   +    +     V K  
Sbjct: 6   IREYDGKRILAQNWDEYFDGAFQYDF---KSVLITPDTDLDKVPEEHPWVKEMPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +  G V    + + V   I++ +   +  +  G  G   +   V
Sbjct: 63  MLFGKRGKLGLIFFKKEKPGDV----TWEDVKEWIKQKMSEEI--EINGVKGHLTH-FLV 115

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+++             S  GG+++EE      +        P+    
Sbjct: 116 EPFVPHKPEEEYYVAITTGEDED--IIYMSAFGGIEVEENWDKVVEVKI-----PVTASD 168

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
            E    + + +    + R    D    LYK F D   + LEINPL+++ + ++  LD   
Sbjct: 169 EEIKKLIEENVPADIKDREKYADFVFRLYKLFRDLHFTYLEINPLVMV-DSKIYPLDFVG 227

Query: 227 SFDDNALY---RHLDIQEL-----RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMV 273
             DD A +   R     E      RD++ E+    E  + + + + L     +G I  +V
Sbjct: 228 RVDDTAQFVAGRKWGDLEFPAGFGRDLTPEEKYIKEMDEKSGASLKLTILNPEGRIWTLV 287

Query: 274 NGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKGILIN 327
            G G ++   D +   G     AN+ +  G       ++ V   F ++T     KG  I 
Sbjct: 288 AGGGASVVYADTVADLGYVKELANYGEYSGNPSRAETREYVKTVFDLMTRSKHPKGHKIL 347

Query: 328 IFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES---- 374
           I GG I     + K   GI+ A+KE      +I + + +R  G N ++G + I E+    
Sbjct: 348 IIGGAIANFTDVAKTFDGIIDAMKEYADKLREIGVRIYVRRGGPNYEVGLKRIKEAAEEL 407

Query: 375 GLNVI---TAIDLDDAAQKIVHAVKGV 398
           GL +        + +  +K +   + +
Sbjct: 408 GLPIEVYGPETHMTEIVRKAIKEAEEI 434


>gi|255633622|gb|ACU17170.1| unknown [Glycine max]
          Length = 172

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 6/149 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGR 58
           +NIHEYQ   L+ K+ V V +GV +SSV  A   IK L       VVKSQI AGGRG G 
Sbjct: 28  LNIHEYQGAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPNENELVVKSQILAGGRGLGT 87

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           FK   +  KGGV +  +   V     ++LG  L+TKQTGP G  V+ VY+ +   ++ E+
Sbjct: 88  FK---SGLKGGVHIVKT-DQVEDIAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVA 147
           Y ++ +DRTS     IA ++GG  IE++A
Sbjct: 144 YFAITLDRTSAGPIIIACSKGGTSIEDLA 172


>gi|224372752|ref|YP_002607124.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia
           profundicola AmH]
 gi|223588537|gb|ACM92273.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Nautilia
           profundicola AmH]
          Length = 444

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 91/432 (21%), Positives = 158/432 (36%), Gaps = 68/432 (15%)

Query: 3   IHEYQAKALLRKY------NVPVA-KGVVISSVHAAESAIK-----TLPGPLYVVKSQIH 50
           I EY  K L  +        +    + V+++S     +  K      L     V K  + 
Sbjct: 6   IREYDGKKLFAQNWDKYFSGLNYPFESVLVTSGDELRAKAKEPGYEWLNEKPLVAKPDML 65

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            G RGK        +  G V +E + K +    +     TL++ Q+G          VE 
Sbjct: 66  FGKRGKNNLVLFKVNKPGDVTLEDAAKWIDE--KRSGKVTLLSGQSGELTH----FIVEP 119

Query: 111 GADI--LRELYLSLL-VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                   E Y++    D  +       S  GGM++EE      +   K+ ID     + 
Sbjct: 120 FTPHSEDEEYYIAATTFDEVND--VLYLSAHGGMEVEENWDKVTEV--KIPID----ASD 171

Query: 168 EDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           E++  L       ++    +    +   N YK F D + + LEINP++I+ N  + +LD 
Sbjct: 172 EEIEKLVKENIPADIPADKKDVYANFAINFYKFFRDLNFAYLEINPVVIVGN-NVYLLDL 230

Query: 225 KISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIAL-----DGNIG 270
               DD A +   D            + + S E+    EA   + + + L      G I 
Sbjct: 231 VARLDDTAGFMMKDKWGDIEFPTPFGMPEKSPEEKAIAEADAKSGASLKLTILNPKGRIW 290

Query: 271 CMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
            +V G G ++   D I  + GG    AN+ +  GG   D+     + +        D   
Sbjct: 291 TLVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPKG 350

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAE 373
           +  ++ I G I     + K   GI+ A ++    +      + +R  G N + G + I  
Sbjct: 351 RDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNYEKGLKDIKA 410

Query: 374 S----GLNVITA 381
           +    GL +   
Sbjct: 411 AAERLGLPIEVY 422


>gi|332028433|gb|EGI68476.1| ATP-citrate synthase [Acromyrmex echinatior]
          Length = 1088

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 139/368 (37%), Gaps = 49/368 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK    ++ AD     +          +  + +G  +     
Sbjct: 48  WLKTERLVVKPDQLIKRRGKLGLIKVNADLIAVQKWI----EQHMNKEQRIGKAIG---- 99

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
                ++    +E         E Y+ +   R +  + F    QGG+DI +V      K 
Sbjct: 100 -----KLKTFIIEPFVPHKSEEEAYVCIYSHRKADTILF--HHQGGIDIGDVDA----KA 148

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL I     +    +     +  +    ++   +   +LYK + +   + LEINPL+I 
Sbjct: 149 LKLNISVGSEMPDRSILINRLLTNVMDDKKVVIAEFIESLYKLYVNLHFTYLEINPLVIT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH-LDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            N  + VLD     D  A +    D  E+       RD   E++   +          L+
Sbjct: 209 DNA-IHVLDLAAKLDTTADFICKPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-D 318
            +  DG I  MV G G ++   D I   G     AN+ +  G   + +     K I S  
Sbjct: 268 ILNPDGRIWTMVAGGGASVIYSDTICDLGAADELANYGEYSGAPSEQQTYEYAKTILSLM 327

Query: 319 SSVK---GILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIG 367
           + VK   G ++ I GGI     +    KGI+ A++E     V+ +I + +R  G N   G
Sbjct: 328 TKVKRSDGKVLIIGGGIANFTNVAATFKGIVKALQEYQSKLVEYDIKIFVRRAGPNYQEG 387

Query: 368 NRLIAESG 375
            R+I E G
Sbjct: 388 LRIIREVG 395


>gi|320170052|gb|EFW46951.1| ATP citrate-lyase [Capsaspora owczarzaki ATCC 30864]
          Length = 1105

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 137/373 (36%), Gaps = 47/373 (12%)

Query: 33  SAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLI 92
            A   L     VVK       RGK    ++  D  G V+              I      
Sbjct: 54  EAHPWLLTTPLVVKPDQLIKRRGKLGLIKVNTDLAGAVQ-------------WITERRNK 100

Query: 93  TKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDY 150
           +   G     ++   +E         E Y+ +L +R    + F    +GG+DI +V    
Sbjct: 101 SFNIGAVEGTLDTFIIEPFVPHEASDEYYICILSERDGDEILF--HHEGGVDIGDVDAKA 158

Query: 151 PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
            + +  +       VT + +       ++    +    +   +LYK +     + LEINP
Sbjct: 159 VRLMVNVKEIGAQSVTPQLIREQLLQ-KVPAARQEFLANFIHSLYKLYVALFFTYLEINP 217

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQEL---------RDVSEEDSREIEAKQHNLS 261
           L+++   ++ VLD     D  A +                 R+ S E+    E  Q + S
Sbjct: 218 LVVVGT-QVHVLDLAAKLDQTAEFECKPYWAEKIEFPPPFGREASAEERYIAELDQKSGS 276

Query: 262 YIAL-----DGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKI 314
            + L      G I  MV G G ++   D I   GGA   AN+ +  G   + +     K 
Sbjct: 277 SLKLTILNRKGRIWTMVAGGGASVVYSDTICDLGGAAELANYGEYSGAPSESQTYEYAKT 336

Query: 315 ITS----DSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGA 362
           I      +   +G ++ I GGI     +    KGI+ A+KE     V+  I + +R  G 
Sbjct: 337 ILKCMTDERDERGKVLIIGGGIANFTNVADTFKGIVRALKEFQKLIVEHGISIYVRRGGP 396

Query: 363 NVDIGNRLIAESG 375
           N   G R++ + G
Sbjct: 397 NYQEGLRIMRDLG 409


>gi|313681794|ref|YP_004059532.1| ATP citrate lyase subunit 1 [Sulfuricurvum kujiense DSM 16994]
 gi|313154654|gb|ADR33332.1| ATP citrate lyase subunit 1 [Sulfuricurvum kujiense DSM 16994]
          Length = 438

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 86/423 (20%), Positives = 152/423 (35%), Gaps = 68/423 (16%)

Query: 3   IHEYQAKALLRK----------YNVPVAKGVVISSVHAAESAI-----KTLPGPLYVVKS 47
           I EY  KA+  K          Y     K V++++     +       + L     V K 
Sbjct: 6   IREYDGKAIFSKHWEKYFSGFHYGF---KSVLVTNGDELRACAQKHGFEWLKQEALVAKP 62

Query: 48  QIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
            +  G RGK        +  G V +E + K +   I     +TL++ Q G     +    
Sbjct: 63  DMLFGKRGKNDLVLFKTNKPGDVTLEDAAKWIDEKISH--ETTLLSGQHG----TLTHFI 116

Query: 108 VEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           +E        +E Y+S              S +GGM++EE  +   +K+ ++ I     +
Sbjct: 117 IEPFTPHSQDQEYYISATTVGEDD--VLYLSAEGGMEVEEGWE---EKVNEVTIPIT--M 169

Query: 166 TSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
              ++A L        +  + +          YK + D + + LEINP++++ N  + +L
Sbjct: 170 DDANIAHLIRANVPAGIPAENKERFITFAEQFYKFYRDLNFAYLEINPIVMIGN-DMHIL 228

Query: 223 DSKISFDDNALYRH---------LDIQELRDVSEEDSREIEAKQHNLSYIALD-----GN 268
           D     DD A +                + D S E+    EA   + + + L      G 
Sbjct: 229 DLVARLDDTAGFMMGESWCGAEFPTAFGMEDQSPEEKAIAEADSKSGASLKLTILNPMGR 288

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDS 319
           I  MV G G ++   D I    G     AN+ +  GG    +       +        D 
Sbjct: 289 IWTMVAGGGASVVYADTIADLSGNVADLANYGEYSGGPTTGETKFYADTVLDLMTRHKDP 348

Query: 320 SVKGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGANVDIGNRLI 371
             +  ++ I G I     + K   GI+ + +     +  V     +R  G N + G + I
Sbjct: 349 KGRDKILIIGGAIANFTDVAKTFTGIIQSFETYAEKMKAVGTRIYVRRGGPNYEKGLKDI 408

Query: 372 AES 374
            E+
Sbjct: 409 KEA 411


>gi|195425586|ref|XP_002061078.1| GK10643 [Drosophila willistoni]
 gi|194157163|gb|EDW72064.1| GK10643 [Drosophila willistoni]
          Length = 1095

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 84/411 (20%), Positives = 146/411 (35%), Gaps = 59/411 (14%)

Query: 8   AKALLRKY----NVPVAKGVVISSVHAAESAI-----KTLPGPLYVVKSQIHAGGRGKGR 58
            K +L ++       VA     +       +        L     VVK       RGK  
Sbjct: 11  GKDILNRHLNNHGASVATCRFATVNAETNWSQLSVDHPWLLTTPLVVKPDQLIKRRGKLG 70

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LR 116
              +  +           + V   I E +      ++ G    ++    +E         
Sbjct: 71  LIGVKKNF----------EEVKQWIGERINKD---QKIGNAVGKLRNFIIEPFLPHTDDE 117

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E+Y+ +   R +  + F    QGG+DI +V      K  KL +     +   DV S    
Sbjct: 118 EMYVCIYSHRAADTILFY--HQGGVDIGDVDA----KAVKLDVPVNSKLAQADVKSKLLK 171

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-R 235
                  +    +    LY  F D   + LEINP+++  +  L +LD     D  A +  
Sbjct: 172 EVTDSAKKERIANFITALYATFVDLYFTYLEINPVVVTAD-NLYILDLAAKLDSTADFIC 230

Query: 236 HLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATM 283
                E+       RD   E++   +          L+ +  +G I  MV G G ++   
Sbjct: 231 RPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYS 290

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMRCD 336
           D I   GGA   AN+ +  G   + +     K I      S    +G ++   GGI    
Sbjct: 291 DTICDLGGATELANYGEYSGAPSEQQTYEYAKTILTLMTSSPKHPEGKVLITGGGIANFT 350

Query: 337 VLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
            +    +GI++A++E     V+ N+ + +R  G N   G R + + G  ++
Sbjct: 351 NVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQEGLRRMRDFGATLL 401


>gi|307197888|gb|EFN78987.1| ATP-citrate synthase [Harpegnathos saltator]
          Length = 1087

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 87/390 (22%), Positives = 150/390 (38%), Gaps = 56/390 (14%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           VPV +    ++     +    L     VVK       RGK             ++  ++L
Sbjct: 31  VPVTEN---TNWTDIVNEYSWLKTEKLVVKPDQLIKRRGKLGL----------IKANANL 77

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFI 134
            +V   + + +      +Q G    ++    +E         E Y+ +   R +  + F 
Sbjct: 78  STVQEWVTQRMNKE---QQVGKATGKLKTFIIEPFIPHKLEEEAYVCIYSHRRADTILF- 133

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--ELQGQARIDGGDLFP 192
              QGG+DI +V          L +D  +G    D ++L D L   +    ++   +   
Sbjct: 134 -HHQGGIDIGDVDAKA------LKLDVPVGSELPDRSTLIDELLTNVMDDKKMVIAEFIE 186

Query: 193 NLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-RHLDIQEL-------RD 244
           +LYK + +   + LEINPL++  +  + +LD     D  A +    D  E+       RD
Sbjct: 187 SLYKFYVNLYFTYLEINPLVVT-DTAIYILDLAAKLDTTADFICRPDWGEIDYPPPFGRD 245

Query: 245 VSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFL 297
              E++   +          L+ +   G I  MV G G ++   D I   G     AN+ 
Sbjct: 246 AYSEEAYIADLDAKSGASLKLTILNPSGRIWTMVAGGGASVIYSDTICDLGAADELANYG 305

Query: 298 DVGGGADQDKVAAAFKIITS----DSSVKGILINIFGGIMRCDVLV---KGILSAVKE-- 348
           +  G   + +     K I S    +    G ++ I GGI     +    KGI+ A++E  
Sbjct: 306 EYSGAPSEQQTYEYAKTILSLMTKEKRTDGKVLIIGGGIANFTNVAATFKGIVKALQEYQ 365

Query: 349 ---VKINIPLVMRLEGANVDIGNRLIAESG 375
              V+ NI + +R  G N   G R+I E G
Sbjct: 366 PKLVEYNIKIFVRRAGPNYQEGLRIIREVG 395


>gi|116488186|gb|ABJ98675.1| succinate-CoA ligase ADP-forming beta subunit [Scophthalmus
           maximus]
          Length = 188

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 3/137 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  + V  G+V SS   A +  K +     VVK+Q+ AGGRGKG F+
Sbjct: 55  LSLHEYMSIGLLKEAGISVPVGLVASSSEEAYAVAKQIGSKDLVVKAQVLAGGRGKGTFE 114

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 KGGV++  S +       +++G  L TKQTG  G   N V++ +     RE Y 
Sbjct: 115 ---GGLKGGVKIVYSPEEARDISSQMIGRKLYTKQTGEAGRICNQVFICERRYPRREYYF 171

Query: 121 SLLVDRTSGMVAFIAST 137
           ++ ++R+      I S+
Sbjct: 172 AITMERSFQGPVLIGSS 188


>gi|56753963|gb|AAW25174.1| SJCHGC06370 protein [Schistosoma japonicum]
          Length = 180

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 71/144 (49%), Positives = 98/144 (68%), Gaps = 1/144 (0%)

Query: 253 IEAKQHNLSYIAL-DGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
            +A  + L+YI L DGNIGC+VNGAGLAMATMD+I  + G PANFLD+GG   + +V  A
Sbjct: 23  ADAAHNGLNYIGLNDGNIGCIVNGAGLAMATMDLIHYHHGKPANFLDLGGSVTRSQVEKA 82

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           F ++   SS+  IL+NIFGGI+ C ++ +G+LSA+K   INIP+V+RLEG +      LI
Sbjct: 83  FCLLARHSSINCILVNIFGGIVNCKIIAEGLLSALKNNIINIPVVVRLEGNSAVEAQSLI 142

Query: 372 AESGLNVITAIDLDDAAQKIVHAV 395
           +  GL++I A  L++AA   V   
Sbjct: 143 SNCGLDLIAATSLEEAASIAVSKA 166


>gi|195383876|ref|XP_002050651.1| GJ20089 [Drosophila virilis]
 gi|194145448|gb|EDW61844.1| GJ20089 [Drosophila virilis]
          Length = 1098

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 136/369 (36%), Gaps = 50/369 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK            GV+   S + V   I E L      ++ 
Sbjct: 49  WLLTTPLVVKPDQLIKRRGKLGLI--------GVK--KSFEQVKQWIGERLNKD---QKI 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E+Y+ +   R++  + F     GG+DI +V      K 
Sbjct: 96  GNAVGKLRNFIIEPFVPHTEAEEMYVCIYSHRSADTILFY--HLGGVDIGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL +     ++  DV +           +         LY  F D   + LEINPL++ 
Sbjct: 150 VKLEVPVDSTLSLADVKTTLLKAITDASKKERIAKFIYALYATFADLYFTYLEINPLVVT 209

Query: 215 KNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  L +LD     D  A +       E+       RD   E++   +          L+
Sbjct: 210 AD-NLYILDLAAKLDSTADFICRPKWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 268

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--- 316
            +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I    
Sbjct: 269 ILNRNGRIWTMVAGGGASVIYSDTICDLGGATELANYGEYSGAPSEQQTYEYAKTILNLM 328

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDI 366
             S     G ++   GGI     +    +GI++A++E     V+ N+ + +R  G N   
Sbjct: 329 TSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPNYQE 388

Query: 367 GNRLIAESG 375
           G R + + G
Sbjct: 389 GLRRMRDFG 397


>gi|296439767|sp|P86226|SUCB1_MESAU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=ATP-specific succinyl-CoA
           synthetase subunit beta; AltName: Full=Succinyl-CoA
           synthetase beta-A chain; Short=SCS-betaA
          Length = 221

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 92/356 (25%), Positives = 126/356 (35%), Gaps = 152/356 (42%)

Query: 43  YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR 102
            V+K+Q+ AGGR                 +  S +             LITKQTG  G  
Sbjct: 2   VVIKAQVLAGGR-----------------IVFSPEEAK----------LITKQTGAKGRI 34

Query: 103 VNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
            N V V +     RE Y ++ ++R+      I S QGG++IE+VA + P+ I K      
Sbjct: 35  CNQVLVCER----REYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVK------ 84

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
                         +           +    LY  F                        
Sbjct: 85  -------------KMGFPSNIVDSAAENMIKLYNLFL----------------------- 108

Query: 223 DSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMAT 282
             KI+FD N+ YR   I +L+D S+ED R                               
Sbjct: 109 --KINFDSNSAYRQK-IFDLQDWSQEDER------------------------------- 134

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
                L+GG PANFLDVGGGA   +V  AFK       V+ IL+NIFGGIM         
Sbjct: 135 -----LHGGTPANFLDVGGGATVQQVTEAFK-------VQAILVNIFGGIM--------- 173

Query: 343 LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
                          RL+G  VD            ++   DLD+AA+ +V   + V
Sbjct: 174 ---------------RLQGTRVDDAK---------ILACDDLDEAAKMVVKLSEIV 205


>gi|312183635|gb|ADQ42387.1| ATP-citrate lyase subunit B [Methanosaeta harundinacea]
          Length = 425

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 83/419 (19%), Positives = 147/419 (35%), Gaps = 73/419 (17%)

Query: 3   IHEYQAKALLRKYNVPVAK--------GVVIS-SVH---AAESA-IKTLPGPLYVVKSQI 49
           I EY AK LL +    +          G +   +        +     +     VVK   
Sbjct: 6   IREYDAKKLLAE---RLPDYADDFDYDGQIALVTPETDLEVVAIKNPWVKKKRLVVKPDQ 62

Query: 50  HAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             G RG              + +++S       I+E +G  ++          ++   +E
Sbjct: 63  LFGKRGAHGL----------ILLDASWDEAKGYIQENMGREVLVGSVVG---TLDTFLIE 109

Query: 110 DGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                    ELY+++  +R         S +GG+DIE   +   +    + +D L     
Sbjct: 110 PFIPHGPEEELYVAIKSERDKD--VIYFSPRGGVDIEANWESVTE----IPVDILA--RP 161

Query: 168 EDVASLCDML--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           E++  L   L   L  +           LY+ + D   + LEINP +   +GR+  LD  
Sbjct: 162 EEL-DLGSKLPAGLADRLAPTAA-FIKGLYRLYRDLGFAYLEINPFVFT-DGRVVPLDLV 218

Query: 226 ISFDDNALYRHLDIQ---ELRDV-----SEEDSREIE-----AKQHNLSYIALDGNIGCM 272
              DD   +         E  +      +EE++   E          L+ +   G +  M
Sbjct: 219 ARLDDAEAFWQRKAWLGLEFPEPFGRALTEEEAWIKEIDSRTGASLKLTILNPRGRVWTM 278

Query: 273 VNGAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D I   G  G  AN+ +  G    +      K I        D   +  
Sbjct: 279 VAGGGASVIYADTICDLGFAGELANYGEYSGDPSTEDTYEYTKTILDLMTREEDPEGRPK 338

Query: 325 LINIFGGIMRCDVLV---KGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
            + I GGI     +    KG++ A+++ K       + + +R  G N + G R++ + G
Sbjct: 339 YLLIGGGIANFTDVAKTFKGVVMALEDYKERLREAGVEIYVRRGGPNYEEGLRIMRKLG 397


>gi|195029649|ref|XP_001987684.1| GH19829 [Drosophila grimshawi]
 gi|193903684|gb|EDW02551.1| GH19829 [Drosophila grimshawi]
          Length = 1100

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 78/370 (21%), Positives = 135/370 (36%), Gaps = 52/370 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +                    +++ +G  L   Q 
Sbjct: 49  WLLTTPLVVKPDQLIKRRGKLGLVGVKKSF--------------EQVKQWIGERLNQDQK 94

Query: 97  -GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
            G    ++    +E         E+Y+ +   R++  + F     GG+DI +V      K
Sbjct: 95  IGNAVGKLRNFIIEPFVPHTEAEEMYVCIYSHRSADTILFY--HLGGVDIGDVDA----K 148

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
             KL +     ++  DV +           +    +    LY  F +   + LEINPL++
Sbjct: 149 AVKLDVPVDSELSLADVKTTLLKAITDESKKERIANFIYALYATFAELYFTYLEINPLVV 208

Query: 214 MKNGRLRVLDSKISFDDNALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNL 260
             +  L +LD     D  A +    +  E+       RD   E++   +          L
Sbjct: 209 TAD-NLYILDLAAKLDSTADFICRPNWGEIDYPPPFGRDAFPEEAYIADLDAKSGASLKL 267

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-- 316
           + +  +G I  MV G G ++   D I   GGA   AN+ +  G   + +     K I   
Sbjct: 268 TILNRNGRIWTMVAGGGASVIYSDTICDLGGATELANYGEYSGAPSEQQTYEYAKTILNL 327

Query: 317 ---SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVD 365
              S     G ++   GGI     +    +GI++A++E     V+ N+ + +R  G N  
Sbjct: 328 MTSSPKHPDGKVLITGGGIANFTNVASTFQGIITALREFQSKLVEHNVSIFVRRAGPNYQ 387

Query: 366 IGNRLIAESG 375
            G R + + G
Sbjct: 388 EGLRRMRDFG 397


>gi|170671419|gb|ACB29553.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671421|gb|ACB29554.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671423|gb|ACB29555.1| succinyl-CoA synthetase [Alteromonas macleodii]
          Length = 132

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/131 (42%), Positives = 78/131 (59%)

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   DI  ELYL  +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G    
Sbjct: 1   ESCTDIANELYLGAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPY 60

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L L G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  
Sbjct: 61  QAREMAFKLGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGI 120

Query: 229 DDNALYRHLDI 239
           D NALYR   +
Sbjct: 121 DGNALYRQPKL 131


>gi|170671381|gb|ACB29534.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671383|gb|ACB29535.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671385|gb|ACB29536.1| succinyl-CoA synthetase [Alteromonas macleodii ATCC 27126]
 gi|170671387|gb|ACB29537.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671389|gb|ACB29538.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671391|gb|ACB29539.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671393|gb|ACB29540.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671395|gb|ACB29541.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671397|gb|ACB29542.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671399|gb|ACB29543.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671401|gb|ACB29544.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671403|gb|ACB29545.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671405|gb|ACB29546.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671407|gb|ACB29547.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671409|gb|ACB29548.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671411|gb|ACB29549.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671413|gb|ACB29550.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671415|gb|ACB29551.1| succinyl-CoA synthetase [Alteromonas macleodii]
 gi|170671417|gb|ACB29552.1| succinyl-CoA synthetase [Alteromonas macleodii]
          Length = 132

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/131 (42%), Positives = 78/131 (59%)

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   DI  ELYL  +VDRT+  V F+AST+GG++IE VA++ P+KI K  IDP++G    
Sbjct: 1   ESCTDIANELYLGAVVDRTTRRVVFMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPY 60

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L L G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  
Sbjct: 61  QAREMAFALGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGI 120

Query: 229 DDNALYRHLDI 239
           D NALYR   +
Sbjct: 121 DGNALYRQPKL 131


>gi|307181417|gb|EFN69012.1| ATP-citrate synthase [Camponotus floridanus]
          Length = 819

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 79/368 (21%), Positives = 142/368 (38%), Gaps = 49/368 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             ++V + L +V   + + +      ++ 
Sbjct: 48  WLKTEKLVVKPDQLIKRRGKLGL----------IKVNADLPTVQKWVEQRMNKE---QRV 94

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G    ++    +E         E+Y+ +   R +  + F    QGG+DI +V      K 
Sbjct: 95  GKATGKLKTFIIEPFVSHKPEEEVYICIYSHRKADTILF--HHQGGVDIGDVDA----KA 148

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KL I     +    +     ++ +    ++   +   +LYK + +   + +EINPL++ 
Sbjct: 149 LKLDIPVGGELPDRSILINKLLVNVADDKKVMIAEFIESLYKLYVNLYFTYMEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH-LDIQEL-------RDVSEEDSREIE-----AKQHNLS 261
            +  + +LD     D  A +    D  E+       RD   E++   +          L+
Sbjct: 209 DSA-IYILDLAAKLDTTADFICKPDWGEIDYPPPFGRDAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS 319
            +  +G I  MV G G ++   D I   G     AN+ +  G   + +     K I S  
Sbjct: 268 ILNPNGRIWTMVAGGGASVIYSDTICDLGAADELANYGEYSGAPSEQQTYEYAKTILSLM 327

Query: 320 SV----KGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIG 367
           +      G ++ I GGI     +    KGI+ A++E     V+ +I + +R  G N   G
Sbjct: 328 TKTKHSNGKVLIIGGGIANFTNVAATFKGIVKALQEYQPKLVEHDIRIFVRRAGPNYQEG 387

Query: 368 NRLIAESG 375
            R+I E G
Sbjct: 388 LRIIREVG 395


>gi|189238364|ref|XP_001808341.1| PREDICTED: similar to ATP-citrate synthase [Tribolium castaneum]
          Length = 1092

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 146/413 (35%), Gaps = 64/413 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI-----------SSVHAAESAIKTLPGPLYVVKSQIHA 51
           I E   K L+ K+   +  G              +      +    L     VVK     
Sbjct: 6   IREATGKNLINKH---LPGGTAAVQCRFASVEPETKFSELVATHPWLKSEKLVVKPDQLI 62

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
             RGK             + V   L  V   I + +      ++ G    ++    +E  
Sbjct: 63  KRRGKLGL----------IAVNKDLAEVQQWISDRMNKE---QKIGAATGKLRNFIIEPF 109

Query: 112 ADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                  E+Y+ +   R    + F    QGG+DI +V      K  KL +     V  + 
Sbjct: 110 VPHKDNEEVYVCIYSHRHGDTILFY--HQGGVDIGDVD----SKAVKLEVPVGESVDEKR 163

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +     + ++    +    +   NLYK + D   + LEINPL++ +   + VLD     D
Sbjct: 164 ITE-ALLSQVDASKKAMIANFVNNLYKLYVDLYFTYLEINPLVVTQ-KEIYVLDLAAKLD 221

Query: 230 DNALYRHLDIQEL--------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGA 276
             A +    +           RD   E++   +    + + + L      G I  MV G 
Sbjct: 222 ATADFICKPMWGEIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKSGRIWTMVAGG 281

Query: 277 GLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS----DSSVKGILINIFG 330
           G ++   D I   GG    AN+ +  G   + +     K I S    +   +G ++   G
Sbjct: 282 GASVIYSDTICDLGGAKELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGKVLITGG 341

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A+ E     ++  + + +R  G N   G R + E G
Sbjct: 342 GIANFTNVAATFRGIITALVEFQQRLIEHKVSIFVRRAGPNYQEGLRRMREVG 394


>gi|270008566|gb|EFA05014.1| hypothetical protein TcasGA2_TC015096 [Tribolium castaneum]
          Length = 1089

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 146/413 (35%), Gaps = 64/413 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI-----------SSVHAAESAIKTLPGPLYVVKSQIHA 51
           I E   K L+ K+   +  G              +      +    L     VVK     
Sbjct: 6   IREATGKNLINKH---LPGGTAAVQCRFASVEPETKFSELVATHPWLKSEKLVVKPDQLI 62

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
             RGK             + V   L  V   I + +      ++ G    ++    +E  
Sbjct: 63  KRRGKLGL----------IAVNKDLAEVQQWISDRMNKE---QKIGAATGKLRNFIIEPF 109

Query: 112 ADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
                  E+Y+ +   R    + F    QGG+DI +V      K  KL +     V  + 
Sbjct: 110 VPHKDNEEVYVCIYSHRHGDTILFY--HQGGVDIGDVD----SKAVKLEVPVGESVDEKR 163

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +     + ++    +    +   NLYK + D   + LEINPL++ +   + VLD     D
Sbjct: 164 ITE-ALLSQVDASKKAMIANFVNNLYKLYVDLYFTYLEINPLVVTQ-KEIYVLDLAAKLD 221

Query: 230 DNALYRHLDIQEL--------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGA 276
             A +    +           RD   E++   +    + + + L      G I  MV G 
Sbjct: 222 ATADFICKPMWGEIDYPPPFGRDAYPEEAYIADLDSKSGASLKLTILNKSGRIWTMVAGG 281

Query: 277 GLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS----DSSVKGILINIFG 330
           G ++   D I   GG    AN+ +  G   + +     K I S    +   +G ++   G
Sbjct: 282 GASVIYSDTICDLGGAKELANYGEYSGAPSEQQTYEYAKTILSLMTQEKHPQGKVLITGG 341

Query: 331 GIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           GI     +    +GI++A+ E     ++  + + +R  G N   G R + E G
Sbjct: 342 GIANFTNVAATFRGIITALVEFQQRLIEHKVSIFVRRAGPNYQEGLRRMREVG 394


>gi|326432316|gb|EGD77886.1| acly protein [Salpingoeca sp. ATCC 50818]
          Length = 1083

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 88/411 (21%), Positives = 147/411 (35%), Gaps = 59/411 (14%)

Query: 3   IHEYQAKALLRKY---------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGG 53
           I E   K LL ++         N+ +A      S          L     V K       
Sbjct: 6   IREVDGKRLLAEFLPADCPGKKNIAIAAFGPGDSWERLAENHPFLTQKTLVAKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK    ++  D +G            + + E + STL   Q G     +    +E    
Sbjct: 66  RGKLGLVKVKVDFEG----------AKTWVNEKMNSTL---QIGSATGTLKHFVLEPFVA 112

Query: 114 ILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
             +  E Y  +   R    + F    +GG+DI +V      K  ++ +      T + + 
Sbjct: 113 HEQSDEHYCCIYAGRDFNTILF--HHEGGVDIGDVDA----KAARMEVQLDTKPTPDQIR 166

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
               +  L    +    D    LY  F D   + +EINP+++ K+  + +LD     D  
Sbjct: 167 E-SLLTHLDASRQQVVADFLSQLYALFIDLHFTYMEINPIVV-KDNEVYILDLAAKLDQT 224

Query: 232 ALY-RHLDIQEL-------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGL 278
           A Y  H     +       RD   E++   E          L+ +   G I  MV G G 
Sbjct: 225 AEYLCHNKWGAITFPPPFGRDALPEEAYIAELDAKSGASLKLTILNPRGRIWTMVAGGGA 284

Query: 279 AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS----DSSVKGILINIFGGI 332
           ++   D I   GGA   AN+ +  G   + +     K I S    ++   G ++ I GGI
Sbjct: 285 SVVYSDTICDLGGASELANYGEYSGAPSESQTFEYAKTILSLMTREAHPDGKVLIIGGGI 344

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                +    KGI+ A+ E      +  + + +R  G N   G + + ++G
Sbjct: 345 ANFTNVASTFKGIIRALDEYHGILHEQKVKIFVRRGGPNFQEGLKCMRDAG 395


>gi|170671425|gb|ACB29556.1| succinyl-CoA synthetase [Alteromonas macleodii]
          Length = 132

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/131 (41%), Positives = 77/131 (58%)

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   DI  ELYL  +VDRT+  V  +AST+GG++IE VA++ P+KI K  IDP++G    
Sbjct: 1   ESCTDIANELYLGAVVDRTTRCVVSMASTEGGVEIETVAEETPEKILKAEIDPIVGPQPY 60

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L L G        +F  L K F + D++L+EINPL+I  +G L  LD+K+  
Sbjct: 61  QAREMAFALGLSGVQIKQFTQIFLGLAKMFEELDVALIEINPLVIKTDGNLHCLDAKVGI 120

Query: 229 DDNALYRHLDI 239
           D NALYR   +
Sbjct: 121 DGNALYRQPKL 131


>gi|34558814|gb|AAQ75158.1| citrate lyase subunit 1 [Alvinella pompejana epibiont 7G3]
          Length = 447

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 82/422 (19%), Positives = 151/422 (35%), Gaps = 59/422 (13%)

Query: 3   IHEYQAKALLRKY-NVPVAKG------VVISSVHAAESAIK----TLPGPLYVVKSQIHA 51
           I EY AK++L ++ +    K       +++ +    + A +     L     V K  +  
Sbjct: 6   IREYDAKSILARHWDTYFPKFNYPYQTILVETGEQLKKAAETTHPWLKEKPLVAKPDMLF 65

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR----VNCVY 107
           G RGK        +  G V +E +   +                  P G      +    
Sbjct: 66  GKRGKNGLVLFKVNKPGDVTLEDAANWIDEKRATKQKVYFSFDGDTPAGEPSEDYLTHFI 125

Query: 108 VEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ---KIFKLLIDPL 162
           VE         E Y+S  V           S +GGM++EE      +   KI +   D  
Sbjct: 126 VEPFTPHSQDEEYYISATVVGDDD--VLYMSAEGGMEVEENWDKVIEVKFKINETEDDIE 183

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
             +     A +      + + + +  +     +KA+ + + + LEINP ++  + ++ +L
Sbjct: 184 KKIRENIPADV------KEEDKENFAEFAIGFFKAYRELNFAYLEINPFVMQ-DNKIELL 236

Query: 223 DSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIAL-----DGN 268
           D     DD A +  +D            +   S+E+    EA     + + L     +  
Sbjct: 237 DMVAKLDDTAGFMMVDHWGKIEFPMPFGMEAKSKEEQAVEEADSKTGASLKLTVLKPEAR 296

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
           I  MV G G ++   D I  + G    AN+ +  GG    +     + I        D  
Sbjct: 297 IWTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQ 356

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA 372
            +  ++ I G I     + K   GI+ A +E       + + + +R  G N + G R I 
Sbjct: 357 GREKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNYEKGLRDIR 416

Query: 373 ES 374
           ++
Sbjct: 417 DA 418


>gi|196002753|ref|XP_002111244.1| hypothetical protein TRIADDRAFT_22398 [Trichoplax adhaerens]
 gi|190587195|gb|EDV27248.1| hypothetical protein TRIADDRAFT_22398 [Trichoplax adhaerens]
          Length = 1088

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 147/412 (35%), Gaps = 57/412 (13%)

Query: 3   IHEYQAKALLRKYN-----VPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRG 55
           I+E   K L+ ++       P+   V  S++  A+   +   L     VVK       RG
Sbjct: 6   IYEADGKRLISQHLQFPQLAPIKSAVAASNLDCAKLQDESSWLSSERLVVKPDQLIKRRG 65

Query: 56  KGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI- 114
           K    ++ AD             V   I E +   +   Q       +    VE      
Sbjct: 66  KLGLIKVNADWP----------EVQKWITERMNKPI---QVSGATGTLRRFIVEPFVKHT 112

Query: 115 -LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             +ELYL +   R    + F    +GG+D+  V     +K  KL I      + + V   
Sbjct: 113 QDQELYLCIYGTREGDSILFY--HEGGVDVGNVD----EKALKLDIAANKLPSIDQVEKE 166

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
                +    +    +    L+  +     + LEINPL+++ N  + +LD     D  A 
Sbjct: 167 LVK-NVAAPIKRLVAEFIVALFNIYRKLYFAYLEINPLVVVDNA-IYILDLAAKIDATAE 224

Query: 234 YRHLDIQEL--------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAM 280
           Y                RD   E++   E          L+ +   G +  MV G G ++
Sbjct: 225 YLCKKEWGEITFPPPFGRDAYPEEAYIAELDAKSGASLKLTILNEQGRVWTMVAGGGASV 284

Query: 281 ATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITS----DSSVKGILINIFGGIMR 334
              D I   G     AN+ +  G   + +     K++ S        +G ++ I GGI  
Sbjct: 285 IYSDTICDLGFSHELANYGEYSGAPTESQTYEYAKVVLSLICRHKHPEGKVLIIGGGIAN 344

Query: 335 CDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
              +    KGI+ A+ E     V+  + +  R  G N   G R++ + G ++
Sbjct: 345 FTNVAATFKGIIRALMEFRHLLVESKVSIFARRGGPNYQEGLRMMRDLGTDL 396


>gi|292619409|ref|XP_001334195.3| PREDICTED: hypothetical protein LOC794259 [Danio rerio]
          Length = 2571

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 136/381 (35%), Gaps = 56/381 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +                    ++E L S L+T+ T
Sbjct: 49  WLLTERLVVKPDQLIKRRGKLGLVAVDLKL--------------ESVQEWLKSHLMTEIT 94

Query: 97  GPTGSRV-NCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
                 V     +E         E Y+ +   R    V F    +GG++I +V     + 
Sbjct: 95  VGNAKGVLKKFLIEPFVPHIQEEEFYVCIYASREGSHVLF--HHEGGVEIGDVDNKAQRL 152

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
              L ID    +  E V     ++ +    +         L+  + D   + LEINPL++
Sbjct: 153 --TLGID--EKLMEEIVTQQL-LVHVPDDKKEVLASFIVGLFNLYEDLYFTYLEINPLVV 207

Query: 214 MKNGRLRVLDSKISFDDNALYRH-LDIQEL-------RDVSEEDSREIEAKQHNLSYIAL 265
            K+G + VLD     D  A Y       ++       R+   E++   +    + + + L
Sbjct: 208 TKDG-VYVLDMAAKIDSAAEYICKPKWGDVEFPPPFGREAYPEEAYIADLDSKSGASLKL 266

Query: 266 D-----GNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-- 316
                 G I  MV G G ++   D I   GG    AN+ +  G   + ++    K I   
Sbjct: 267 TVLNPSGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGSPSEQQMYDYAKTILLL 326

Query: 317 --SDSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDI 366
              +    G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   
Sbjct: 327 MTREKHSDGKVLIIGGSIANFTNVAATFKGIVRAIKDYQEPLKEHEVTIFVRRGGPNYQE 386

Query: 367 GNRLIAE----SGLNVITAID 383
           G R++ E    +G+ +     
Sbjct: 387 GLRVMGEVGKTTGIPIHVFGT 407


>gi|307721497|ref|YP_003892637.1| ATP citrate lyase subunit 1 [Sulfurimonas autotrophica DSM 16294]
 gi|306979590|gb|ADN09625.1| ATP citrate lyase subunit 1 [Sulfurimonas autotrophica DSM 16294]
          Length = 446

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 90/421 (21%), Positives = 152/421 (36%), Gaps = 57/421 (13%)

Query: 3   IHEYQAKALLRKY-NVPVAKG------VVISSVHAAESAIK---TLPGPLYVVKSQIHAG 52
           I EY AK++L K+ N            V+++S      A K    L     VVK  +  G
Sbjct: 6   IREYDAKSILAKHWNKYFPDFSYAYETVLVTSGAELLEAAKEKPWLKEKPLVVKPDMLFG 65

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR----VNCVYV 108
            RGK           G V +E +   +    +E            PTG      +    V
Sbjct: 66  KRGKNGLVLFKDQKPGDVTLEKAAAWIDEKAKEDQSVYFSFDGDTPTGEPKVDRLTHFIV 125

Query: 109 EDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+S  V           S +GGM++EE      +K+ +L        T
Sbjct: 126 EPFTPHDQSEEYYISATVVGDED--VLYLSAEGGMEVEEGWD---EKVTELAFPITA--T 178

Query: 167 SEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            E++A         +++ + + +        +KA+   + + LEINP ++  + ++ +LD
Sbjct: 179 EEEIAEKIKANVPADVKPEDKENFAKFAIGFFKAYRKLNFAYLEINPFVMQGS-KIELLD 237

Query: 224 SKISFDDNALYRH---------LDIQELRDVSEEDSREIEAKQHNLSYIAL-----DGNI 269
                DD A +                +   S E     EA     + + L     D  I
Sbjct: 238 MVAKLDDTAGFMMTEEWGDIEYPTAFGMEAKSPEVEAIEEADAKTGASLKLTLLKPDARI 297

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        D   
Sbjct: 298 WTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPKG 357

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAE 373
           +  ++ I G I     + K   GI+ A +E      ++ I + +R  G N + G + I E
Sbjct: 358 RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKEVGIKIYVRRGGPNYEKGLKDIKE 417

Query: 374 S 374
           +
Sbjct: 418 A 418


>gi|68488751|ref|XP_711801.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
 gi|68488788|ref|XP_711783.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
 gi|46433107|gb|EAK92561.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
 gi|46433126|gb|EAK92579.1| likely succinyl-CoA synthetase beta-subunit fragment [Candida
           albicans SC5314]
          Length = 120

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/116 (53%), Positives = 80/116 (68%)

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           MATMDIIKLYGG PANFLD GG A  + +  AF++I SD  V GI +NIFGGI+RCD + 
Sbjct: 1   MATMDIIKLYGGEPANFLDCGGTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVA 60

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           KG+++A K   ++IP+V+RL+G N+     LI  SGL +    DLD AA+KIV   
Sbjct: 61  KGLIAATKNFNLDIPVVVRLQGTNMAEAKELIDNSGLKLYAFEDLDPAAEKIVQLA 116


>gi|188996978|ref|YP_001931229.1| ATP citrate synthase, subunit 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932045|gb|ACD66675.1| ATP citrate synthase, subunit 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 435

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 163/447 (36%), Gaps = 72/447 (16%)

Query: 3   IHEYQAKALLRK-----YN---------VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I EY  K ++ +     +          V V      +           L     V K  
Sbjct: 6   IREYDGKRIIAQNWKDYFGDAFNYEFKSVLVTP---ETDFDKLPEQYPWLKETPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +  G V+ E ++K +   ++E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLVLYKIEKPGDVKYEDAVKWIKQKMQE------EVEINGVKGHLTH-FLI 115

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+S  +           S  GG+D+EE       K+ ++ I P    +
Sbjct: 116 EPFVPHKPEEEYYVSFSMGDDYDT--VYMSAFGGIDVEENW----DKVVEVHIPPTA--S 167

Query: 167 SEDVASLCDM-LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E++  L    +  + + R   GD     YK F D      EINPL+++ +  + +LD  
Sbjct: 168 DEEIEKLIKANVPKEIKDREKYGDFVVRAYKMFRDLHFVYFEINPLVMV-DNNVYLLDFV 226

Query: 226 ISFDDNALYRH-LDIQEL-------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
              DD A +       EL       RD++ E+    E  + + S + L     +G I  +
Sbjct: 227 GKVDDTAGFVVGKKWGELEFPSGFGRDLTPEEKYIKELDEKSGSSLKLTILNPEGRIWTL 286

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D +   G     AN+ +  G   + +     K +          S K  
Sbjct: 287 VAGGGASVVYADTVADMGYVNDLANYGEYSGNPTRTETREYVKTVLDLMTRSKHPSGKPK 346

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES-- 374
           ++ I G I     + K   GI+ A KE      ++ + + +R  G N ++G + I ++  
Sbjct: 347 ILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVRIYVRRGGPNYEVGLKRIKQAAE 406

Query: 375 --GLNVI---TAIDLDDAAQKIVHAVK 396
             GL +      + + D  +K +   K
Sbjct: 407 ELGLPIEVYGPELHMTDIVRKALEEEK 433


>gi|268325585|emb|CBH39173.1| conserved hypothetical protein containing ATP-grasp domain
           [uncultured archaeon]
          Length = 425

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 90/438 (20%), Positives = 163/438 (37%), Gaps = 71/438 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKG------VVI-----SSVHAAESAIKTLPGPLYVVKSQIHA 51
           I EY AK +L K+   ++KG       V      +S+ AA      +      VK     
Sbjct: 6   IREYDAKRILAKHMRRLSKGTFKYRGRVALVTPDTSIEAAAKKKPWVKTEKLTVKPDQLF 65

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           G RGK             + V ++     S + E + S +   + G    ++    V+  
Sbjct: 66  GKRGKHGL----------LLVNATYDEAKSWLEEKMNSIV---EVGKVQGKLTHFLVQPY 112

Query: 112 ADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
            ++ +E YL+    +      F  S +GG+DIE         +  + +     +   D++
Sbjct: 113 VELDKEYYLAFAGHQEGDYAHF--SAEGGVDIEANW----DMVTTVNVPIDAKIEDVDIS 166

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
            + D +      R    DL   L++ +       LE NP    KNG    +D+    DD 
Sbjct: 167 PILDRVSNDD--RDAFRDLITALFRFYRKLQFGFLEFNPFTH-KNGEFFPVDTVARLDDT 223

Query: 232 ALY-RHLDIQEL-------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGL 278
           A +  H D +++       R++  E+    E  + + S + L      G +  MV G G 
Sbjct: 224 AHFLCHEDWKDVEFPAPFGRELRPEEQYIEELDEKSGSSLKLTILNPKGRVWTMVAGGGA 283

Query: 279 AMATMDIIKL--YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGI----LINIFGGI 332
           ++   D +    +G   A + +  G    ++     K +    + + +    ++ I GGI
Sbjct: 284 SVIYADTVVDLGFGDELATYGEYSGNPTTEETYDYAKTLLDLMTREKVEGGKVLIIGGGI 343

Query: 333 MRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
                +     GI+ A+ +      + +I + +R  G N   G   I E+G  +    DL
Sbjct: 344 ANFTDVAMTFDGIIQALDDYAEQIKEQDIKIFIRRGGPNYKAGLAKIREAGKRL----DL 399

Query: 385 DDAAQ-------KIVHAV 395
           D A         K+V   
Sbjct: 400 DMAVHGPDMHMTKVVSIA 417


>gi|115621242|ref|XP_791999.2| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus
           purpuratus]
 gi|115925081|ref|XP_001197442.1| PREDICTED: similar to ATP citrate lyase [Strongylocentrotus
           purpuratus]
          Length = 1042

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 142/365 (38%), Gaps = 51/365 (13%)

Query: 43  YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR 102
            VVK       RGK    ++ AD +G          V   +   LG  +   + G    +
Sbjct: 6   LVVKPDQLIKRRGKLGLIKVNADLQG----------VKDWLTTRLGQNI---EVGAANGK 52

Query: 103 VNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
           +    +E         E Y+ +   R S     + + +GG+D+ +V      K  KL I 
Sbjct: 53  LKNFLIEPFVAHKPEDEFYVCIYCQRASD--VILFTHEGGVDVGDVDA----KAVKLEIG 106

Query: 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
               +T+E + +   +  +    +        +LY+ F D   + LEINPL++    ++ 
Sbjct: 107 LQEEITAEGIKT-ALLSNVTAGKKEMVAGFVLDLYQRFRDLYFTYLEINPLVVTD--KVY 163

Query: 221 VLDSKISFDDNALYRHL-DIQEL-------RDVSEEDSREIEAKQHNLSYIALD-----G 267
           VLD     D  A Y       +L       R+   E++   +    + + + L      G
Sbjct: 164 VLDLAAKIDATAEYLCKVQWGDLEFPPPFGREAFPEEAYIADLDAKSGASLKLTILNPVG 223

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSSV 321
            I  MV G G ++   D I   GGA   AN+ +  G   + +     K I      +   
Sbjct: 224 RIWTMVAGGGASVIYSDTICDLGGAAELANYGEYSGAPSEGQTYEYAKTILGLMTREQHP 283

Query: 322 KGILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAE 373
            G ++ I GGI     +    KGI+ A+K+     ++  + + +R  G N   G R++ E
Sbjct: 284 DGKVLIIGGGIANFTNVASTFKGIVKALKQFREKLIEFRVSIYVRRGGPNYQEGLRVMRE 343

Query: 374 SGLNV 378
            G N+
Sbjct: 344 LGGNL 348


>gi|319789997|ref|YP_004151630.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage
           enzyme) [Thermovibrio ammonificans HB-1]
 gi|317114499|gb|ADU96989.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage
           enzyme) [Thermovibrio ammonificans HB-1]
          Length = 433

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 87/442 (19%), Positives = 163/442 (36%), Gaps = 72/442 (16%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I EY  K +L ++              +V V      + +         L     V K  
Sbjct: 6   IREYDGKRILAEHWNEYFAPEFEYDFKSVLVTP---ETDLDRLPEQYPWLLEMPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +    V  E+  + +   ++E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLILFKKEKPCDVDYETVKQWIREKMQE------EVEIKGKKGKLTH-FLI 115

Query: 109 EDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+++ +           S  GG+D+EE       K+ +++I PL   T
Sbjct: 116 EPCVPHAPEDEYYVAMTLGYDGDH--IYMSAFGGIDVEENW----DKVREIVIPPLA--T 167

Query: 167 SEDVASLCD-MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E++  L +  +  + + +    D    LY+ F D   + LEINPL+++ N ++  LD  
Sbjct: 168 EEEIDRLIEENVPEEIKDKEKYADFVKRLYRFFRDMHFAYLEINPLVMVGN-KVYPLDFV 226

Query: 226 ISFDDNALYRH-LDIQELR-------DVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
              DD A +       EL        ++S E+    E  + + + + L     +G I  +
Sbjct: 227 GRVDDTAQFLVGRKWGELEFPAGFGGELSPEEKYIKEMDEKSGASLKLTILNPEGRIWTL 286

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D +   G     AN+ +  G   + +     K +        D   +  
Sbjct: 287 VAGGGASVVYADTVADLGYVKELANYGEYSGNPSRAETREYVKTVLDLMTRHKDPQGRPK 346

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES-- 374
           ++ I G I     + K   GI+ A KE      ++ + + +R  G N ++G   I ++  
Sbjct: 347 ILIIGGAIANFTDVAKTFDGIIDAFKEYADKMKEVGVKIYVRRGGPNYEVGLAKIKKAAE 406

Query: 375 --GLNVI---TAIDLDDAAQKI 391
             GL +        + +  +K 
Sbjct: 407 ELGLPIEVYGPETHMTEIVKKA 428


>gi|255645379|gb|ACU23186.1| unknown [Glycine max]
          Length = 318

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 126/313 (40%), Gaps = 44/313 (14%)

Query: 2   NIHEYQAKALLRKY-----N--VPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAG 52
            I EY +K LL+++        +P+    V  S +          L     VVK  +  G
Sbjct: 5   KIREYDSKRLLKEHFKRISGQELPIKSAQVTESTNFSELAEKEPWLLSSKLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   L  V S ++E LG  +   + G     +    VE   
Sbjct: 65  KRGKSGL----------VALNLDLAEVDSFVKERLGKEV---EMGGCKGPITTFIVEPFI 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E YL+++ +R    ++F  S  GG++IEE       K+  + +   + +TSE +A 
Sbjct: 112 PHNEEFYLNIVSERLGNSISF--SECGGIEIEENW----DKVKTVFMPTGVSLTSESIAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L   L L+   + +  +    ++  F D D + LE+NP  ++ NG+   LD +   DD A
Sbjct: 166 LVATLPLE--IKGEIEEFLKVIFTLFQDLDFTFLEMNPFTLV-NGKPYPLDMRGELDDTA 222

Query: 233 LYRHLD----------IQELRDVSEEDSREIEAK-QHNLSYIALD--GNIGCMVNGAGLA 279
            +++               +   +E     ++ K   +L +  L+  G I  MV G G +
Sbjct: 223 AFKNFKKWGNIEFPLPFGRVMSTTEAFIHGLDEKTSASLKFTVLNPMGRIWTMVAGGGAS 282

Query: 280 MATMDIIKLYGGA 292
           +   D +   G A
Sbjct: 283 VIYADTVGDLGYA 295


>gi|225848355|ref|YP_002728518.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage
           enzyme) [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643229|gb|ACN98279.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(Citrate cleavage
           enzyme) [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 435

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 166/447 (37%), Gaps = 72/447 (16%)

Query: 3   IHEYQAKALLR-----------KYNVPVAKGVVISSVHAAESAIK---TLPGPLYVVKSQ 48
           I EY  K ++            +Y+    K V+++     E   +    L     V K  
Sbjct: 6   IREYDGKRIIAQNWKDYFGDAFEYDF---KSVLVTPETDFEKLPEEHPWLKTTPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +  G V  E ++K +   ++E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLVLFKINEPGDVTYEDAVKWIKQKMQE------EVEINGVKGHLTH-FLI 115

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y++  +           S  GG+D+EE       K+ ++ I P    +
Sbjct: 116 EPFVPHKPEEEYYVAFSMGDDYDT--VYMSAFGGIDVEENW----DKVSEVKIPPTA--S 167

Query: 167 SEDVASLCDM-LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E++  L    +  + + +    D     YK F D      EINPL+++ N +  +LD  
Sbjct: 168 DEEIEKLIKQNVPKEIKDKEKYADFVIRAYKMFRDLHFVYFEINPLVLVGN-KAYLLDFV 226

Query: 226 ISFDDNALYRH-LDIQEL-------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
              DD A +       EL       RD++ E+    E  + + S + L     +G I  +
Sbjct: 227 GKVDDTAGFVVGKKWGELEFPSGFGRDLTPEEKYIKELDEKSGSSLKLTILNPEGRIWTL 286

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D +   G     AN+ +  G   + +     K +          S K  
Sbjct: 287 VAGGGASVVYADTVADMGYVNELANYGEYSGNPTRTETREYVKTVLDLMTRNKHPSGKPK 346

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES-- 374
           ++ I G I     + K   GI+ A KE      ++ + + +R  G N ++G + I ++  
Sbjct: 347 ILLIGGAIANFTDVAKTFDGIIDAFKEYAEKMRQVGVRIYVRRGGPNYEVGLKKIKQAAE 406

Query: 375 --GLNVI---TAIDLDDAAQKIVHAVK 396
             GL +      + + D  +K +   K
Sbjct: 407 ELGLPIEVYGPELHMTDIVRKALEEEK 433


>gi|237756013|ref|ZP_04584596.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691829|gb|EEP60854.1| ATP-citrate synthase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 435

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 84/398 (21%), Positives = 149/398 (37%), Gaps = 53/398 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     V K  +  G RGK        +  G V+ E ++K +   ++E        +  
Sbjct: 51  WLKDTPLVAKPDMLFGKRGKLGLVLYKIEKPGDVKYEDAVKWIKQKMQE------EVEIN 104

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G  G   +   +E         E Y+S  +           S  GG+D+EE       K+
Sbjct: 105 GVKGHLTH-FLIEPFVPHKPEEEYYVSFSMGDDYDT--VYMSAFGGIDVEENW----DKV 157

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            ++ I P      E    +   +  + + +   GD     YK F D      E+NPL+++
Sbjct: 158 VEVRIPPTAS-DEEIEKPIKANVPNEIKDKEKYGDFVVRAYKMFRDLHFVYFEVNPLVMV 216

Query: 215 KNGRLRVLDSKISFDDNALYRH-LDIQEL-------RDVSEEDSREIEAKQHNLSYIAL- 265
            +  + +LD     DD A +       EL       RD++ E+    E  + + S + L 
Sbjct: 217 -DNNVYLLDFVGKVDDTAAFVVGKKWGELEFPAGFGRDLTPEEKYIKELDEKSGSSLKLT 275

Query: 266 ----DGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT--- 316
               +G I  +V G G ++   D I   G     AN+ +  G   + +     K +    
Sbjct: 276 ILNPEGRIWTLVAGGGASVVYADTIADMGYVNELANYGEYSGNPTRTETREYVKTVLDLM 335

Query: 317 ---SDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVD 365
                 S K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N +
Sbjct: 336 TRSKHPSGKPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMKQVGVKIYVRRGGPNYE 395

Query: 366 IGNRLIAES----GLNVI---TAIDLDDAAQKIVHAVK 396
           +G + I ++    GL +      + + D  +K +   K
Sbjct: 396 VGLKRIKQAAEELGLPIEVYGPELHMTDIVRKALEEEK 433


>gi|325295317|ref|YP_004281831.1| ATP-grasp domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065765|gb|ADY73772.1| ATP-grasp domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 433

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 158/429 (36%), Gaps = 69/429 (16%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I EY  K +L ++              +V V      + +         L     V K  
Sbjct: 6   IREYDGKRILAEHWNEYFAPEFEYDFKSVLVTPQ---TDLDKLPEEYPWLRELPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +    V  E++ + +   + E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLILFKKEKPCDVDYEAAKEWIKKKMEE------DVEIKGKKGKLTH-FLI 115

Query: 109 EDGADILRE--LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E      +E   Y+++ + +         S  GG+D+EE      + +  +L       T
Sbjct: 116 EPCVPHAQEDEYYVAMTLGQDGDH--IFMSAFGGIDVEENWDKVKEVVIPVL------AT 167

Query: 167 SEDVASLCD-MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E+   L +  +  + + +    D    LYK F D   + LEINPL+++ N ++  LD  
Sbjct: 168 DEEAEKLIEENVPEEIKDKEKYADFVKRLYKFFKDMHFAYLEINPLVMVGN-KIYPLDFV 226

Query: 226 ISFDDNALY----RHLDIQELR----DVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
              DD A +    +  +I+       +++ E+    E  + + + + L     +G I  +
Sbjct: 227 GRLDDTAQFLVGRKWGEIEFPAGFGGELTPEEKYIKEMDEKSGASLKLTILNPEGRIWTL 286

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D +   G     AN+ +  G   + +     K +        D   +  
Sbjct: 287 VAGGGASVVYADTVADLGYVNELANYGEYSGNPSRAETREYVKTVLDLMTRKKDPQGRPK 346

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES-- 374
           ++ I G I     + K   GI+ A KE      ++ + + +R  G N ++G   I ++  
Sbjct: 347 ILIIGGAIANFTDVAKTFDGIIDAFKEYADKMKEVGVKIYVRRGGPNYEVGLARIKKAAE 406

Query: 375 --GLNVITA 381
             GL +   
Sbjct: 407 ELGLPIEVY 415


>gi|34558782|gb|AAQ75127.1| citrate lyase subunit 1 [Alvinella pompejana epibiont 6C6]
          Length = 447

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 83/422 (19%), Positives = 151/422 (35%), Gaps = 59/422 (13%)

Query: 3   IHEYQAKALLRKY-NVPVAKG------VVISSVHAAESAIK----TLPGPLYVVKSQIHA 51
           I EY AK++L ++ +    K       V++ +      A +     L     V K  +  
Sbjct: 6   IREYDAKSILARHWDRYFPKFNYPYQTVLVETGEQLREASETTHPWLKEKPLVAKPDMLF 65

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR----VNCVY 107
           G RGK        +  G V +E +   +                  P G      +    
Sbjct: 66  GKRGKNSLVLFKVNKPGDVTLEDAANWIDEKRATQQKVYFSFDGDTPAGEPSEDYLTHFI 125

Query: 108 VEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ---KIFKLLIDPL 162
           VE         E Y+S  V           S +GGM++EE      +   KI +   D  
Sbjct: 126 VEPFTPHSQDEEYYISATVVGDDD--VLYMSAEGGMEVEENWDKVIEVKFKINETEDDIE 183

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
             +     A +      + + + +  +     +KA+ + + + LEINP ++  + ++ +L
Sbjct: 184 KKIRENIPADV------KEEDKENFAEFAIGFFKAYRELNFAYLEINPFVMQ-DNKIELL 236

Query: 223 DSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIAL-----DGN 268
           D     DD A +  +D            +   S+E+    EA     + + L     +  
Sbjct: 237 DMVAKLDDTAGFMMVDHWGKIEFPMPFGMEAKSKEEQAVEEADSKTGASLKLTVLKPEAR 296

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
           I  MV G G ++   D I  + G    AN+ +  GG    +     + I        D+ 
Sbjct: 297 IWTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDTQ 356

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA 372
            +  ++ I G I     + K   GI+ A +E       + + + +R  G N + G R I 
Sbjct: 357 GREKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNYEKGLRDIQ 416

Query: 373 ES 374
           ++
Sbjct: 417 DA 418


>gi|31580727|gb|AAP55203.1| succinyl-CoA synthetase beta subunit [Xanthomonas axonopodis pv.
           citri]
          Length = 118

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 10/126 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN HEYQ+K LL +Y +PV  G V ++   A     +L    ++VK+QIHAGGRGK    
Sbjct: 1   MNFHEYQSKQLLAEYGIPVPAGKVAATPDEAVEVANSLGNGPWMVKAQIHAGGRGKA--- 57

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV+   +   V +   ++LG+ + T QT      VN V V    +I++ELYL
Sbjct: 58  -------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110

Query: 121 SLLVDR 126
           S+LVDR
Sbjct: 111 SILVDR 116


>gi|114054990|gb|ABI50077.1| ATP citrate lyase beta subunit [Desulfurobacterium crinifex]
          Length = 433

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 82/429 (19%), Positives = 158/429 (36%), Gaps = 69/429 (16%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I EY  K +L ++              +V V      + +         L     V K  
Sbjct: 6   IREYDGKRILAEHWNEYFAPEFEYDFKSVLVTPQ---TDLDKLPEEYPWLKELPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +    V  E++ + +   + E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLILFKKEKPCDVDYEAAKEWIKKKMEE------DVEIKGKKGKLTH-FLI 115

Query: 109 EDGADILRE--LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E      +E   Y+++ + +         S  GG+D+EE      + +  +L       T
Sbjct: 116 EPCVPHAQEDEYYVAMTLGQDGDH--IFMSAFGGIDVEENWDKVREVVIPVL------AT 167

Query: 167 SEDVASLCD-MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E+   L +  +  + + +    D    LYK F D   + LEINPL+++ N ++  LD  
Sbjct: 168 DEEAEKLIEENVPEEIKDKEKYADFVKRLYKFFKDMHFAYLEINPLVMVGN-KIYPLDFV 226

Query: 226 ISFDDNALY----RHLDIQELR----DVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
              DD A +    +  +I+       +++ E+    E  + + + + L     +G I  +
Sbjct: 227 GRLDDTAQFLVGRKWGEIEFPAGFGGELTPEEKYIKEMDEKSGASLKLTILNPEGRIWTL 286

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D +   G     AN+ +  G   + +     K +        D   +  
Sbjct: 287 VAGGGASVVYADTVADLGYVNELANYGEYSGNPSRAETREYVKTVLDLMTRKKDPQGRPK 346

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES-- 374
           ++ I G I     + K   GI+ A KE      ++ + + +R  G N ++G   I ++  
Sbjct: 347 ILIIGGAIANFTDVAKTFDGIIDAFKEYADKMKEVGVKIYVRRGGPNYEVGLARIKKAAE 406

Query: 375 --GLNVITA 381
             GL +   
Sbjct: 407 ELGLPIEVY 415


>gi|73965859|ref|XP_860955.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 3
           [Canis familiaris]
          Length = 951

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|114055039|gb|ABI50084.1| ATP citrate lyase beta subunit [Sulfurihydrogenibium subterraneum]
          Length = 435

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 88/449 (19%), Positives = 160/449 (35%), Gaps = 76/449 (16%)

Query: 3   IHEYQAKAL----------------LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK 46
           I EY  K +                 +   V   +    +           L     V K
Sbjct: 6   IREYDGKRIIYQNWKDYFGDAFEYDFKSVLV-TPE----TDFDKLPEEHPWLKTTPLVAK 60

Query: 47  SQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
             +  G RGK        +  G V  E ++K +   ++E        +  G  G   +  
Sbjct: 61  PDMLFGKRGKLGLVLFKVNKPGDVTYEDAVKWIKQKMQE------EVEINGVKGHLTH-F 113

Query: 107 YVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG 164
            +E         E Y++  +           S  GG+D+EE       K+ ++ I P   
Sbjct: 114 LIEPFVPHKPEEEYYVAFSMGDDYDT--VYMSAFGGIDVEENW----DKVSEVKIPPTA- 166

Query: 165 VTSEDVASLCDM-LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            + E++  L    +  + + +    D     YK F D      EINPL+++ N +  +LD
Sbjct: 167 -SDEEIEKLIKQNVPKEIKDKEKYADFVIRAYKMFRDLHFVYFEINPLVLVGN-KAYLLD 224

Query: 224 SKISFDDNALY----RHLDIQEL----RDVSEEDSREIEAKQHNLSYIAL-----DGNIG 270
                DD A +    +  D +      RD++ E+    E  + + S + L     +G I 
Sbjct: 225 FVGKVDDTAGFVAGKKWGDFEFPSGFGRDLTPEEKYIKELDEKSGSSLKLTILNPEGRIW 284

Query: 271 CMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVK 322
            +V G G ++   D +   G     AN+ +  G   + +     K +          S K
Sbjct: 285 TLVAGGGASVVYADTVADMGYVNELANYGEYSGNPTRTETREYVKTVLDLMTRNKHPSGK 344

Query: 323 GILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES 374
             ++ I G I     + K   GI+ A KE      ++ + + +R  G N ++G + I ++
Sbjct: 345 PKILLIGGAIANFTDVAKTFDGIIDAFKEYAEKMRQVGVRIYVRRGGPNYELGLKRIKQA 404

Query: 375 ----GLNVI---TAIDLDDAAQKIVHAVK 396
               GL +      + + D  +K +   K
Sbjct: 405 AEELGLPIEVYGPELHMTDIVRKALEEEK 433


>gi|114054980|gb|ABI50075.1| ATP citrate lyase beta subunit [Balnearium lithotrophicum]
          Length = 434

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 87/431 (20%), Positives = 158/431 (36%), Gaps = 72/431 (16%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I EY  K +L ++              +V V      + ++        L     V K  
Sbjct: 6   IREYDGKRILAQHWNEYFSPEFEYDFKSVLVTP---ETDLNKLPEKYPWLKEVPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +    V  E+  + +   + E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLILFKKEKPCDVDYETVKEWIKKKMEE------EVEIKGKKGKLTH-FLI 115

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+++ +           S  GG+D+EE       K+ +++I PL   T
Sbjct: 116 EPCIPHSPEDEYYVAMTLGYDGDH--IYMSAFGGIDVEENW----DKVKEVVIPPLA--T 167

Query: 167 SEDVASLCD-MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E++  L +  +  + + +    D    LY+ F D   + LEINPL+++ N ++  LD  
Sbjct: 168 EEEIDRLIEENVPPEIKDKEKYADFVKRLYRFFRDMHFAYLEINPLVMVGN-KVCPLDFV 226

Query: 226 ISFDDNALY---RHLDIQEL------------RDVSEEDSREIEAKQHNLSYIALDGNIG 270
              DD A +   R     EL            R+ S     +  A    L+ +  +G I 
Sbjct: 227 GRVDDTAQFLVGRKWGELELPAGFGGGALTWKRNTSRRWDEKSGASLK-LTILNPEGRIW 285

Query: 271 CMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVK 322
            +V G G ++   D +   G     AN+ +  G   + +     K +        D   +
Sbjct: 286 TLVAGGGASVVYADTVADLGYVKELANYGEYSGNPSRAETREYVKTVLDLMTRHKDPQGR 345

Query: 323 GILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES 374
             ++ I G I     + K   GI+ A+KE      ++ + + +R  G N ++G   I ++
Sbjct: 346 PKILIIGGAIANFTDVAKTFDGIIDALKEYADKLKEVGVKIYVRRGGPNYEVGLAKIKKA 405

Query: 375 ----GLNVITA 381
               GL +   
Sbjct: 406 AEELGLPIEVY 416


>gi|114055002|gb|ABI50079.1| ATP citrate lyase beta subunit [Desulfurobacterium
           thermolithotrophum]
          Length = 432

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/428 (18%), Positives = 157/428 (36%), Gaps = 68/428 (15%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I EY  K +L ++              +V V      + +         L     V K  
Sbjct: 6   IREYDGKRILAEHWNEYFAPEFEYDFKSVLVTPQ---TDLDKLPEEYPWLRELPLVAKPD 62

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           +  G RGK        +    V  E++ + +   + E        +  G  G   +   +
Sbjct: 63  MLFGKRGKLGLILFKKEKPCDVDYEAAKEWIKKKMEE------DVEIKGKKGKLTH-FLI 115

Query: 109 EDGADILRE--LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E      +E   Y+++ + +         S  GG+D+EE      + +  +L       T
Sbjct: 116 EPCVPHAQEDEYYVAMTLGQDGDH--IFMSAFGGIDVEENWDKVKEVVIPVL------AT 167

Query: 167 SEDVASLCD-MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
            E+   L +  +  + + +    D    LYK F D   + LEINPL+++ N ++  LD  
Sbjct: 168 DEEAEKLIEENVPEEIKDKEKYADFVKRLYKFFKDMHFAYLEINPLVMVGN-KIYPLDFV 226

Query: 226 ISFDDNALY----RHLDIQELR----DVSEEDSREIEAKQHN----LSYIALDGNIGCMV 273
              DD A +    +  +I+       +++ E+      ++      L+ +  +G I  +V
Sbjct: 227 GRLDDTAQFLVGRKWGEIEFPAGFGGELTPEEKYIKNGRKSGASLKLTILNPEGRIWTLV 286

Query: 274 NGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGIL 325
            G G ++   D +   G     AN+ +  G   + +     K +        D   +  +
Sbjct: 287 AGGGASVVYADTVADLGYVNELANYGEYSGNPSRAETREYVKTVLDFMTGKKDPQGRPKI 346

Query: 326 INIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES--- 374
           + I G I     + K   GI+ A KE      ++ + + +R  G N ++G   I ++   
Sbjct: 347 LIIGGAIANFTDVAKTFDGIIDAFKEYADKMKEVGVKIYVRHGGPNYEVGLARIKKAAEE 406

Query: 375 -GLNVITA 381
            GL +   
Sbjct: 407 LGLPIEVY 414


>gi|67043836|gb|AAY64012.1| ATP synthetase [Pelodiscus sinensis]
          Length = 156

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ EY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F 
Sbjct: 35  LSLLEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGSF- 93

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +  KGGV++  S +  ++   +++G  LITKQTG  G   N V V +     RE Y 
Sbjct: 94  --TSGLKGGVKIVFSPEEALAVSSQMIGQILITKQTGAKGRICNQVLVCERKFPRREYYF 151

Query: 121 SLLVD 125
           ++ ++
Sbjct: 152 AITME 156


>gi|317419433|emb|CBN81470.1| ATP-citrate synthase [Dicentrarchus labrax]
          Length = 1092

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 137/381 (35%), Gaps = 56/381 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +  D +G              +RE L   L+ + T
Sbjct: 49  WLLTERLVVKPDQLIKRRGKLGLVGINLDLEG--------------VREWLSGHLMRETT 94

Query: 97  GPTGSRVNC-VYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
                 V     +E         E Y+ +   R    V F    +GG+++ +V     + 
Sbjct: 95  VGKAKGVLKNFLIEPFVPHTQEEEFYVCIYATREGDHVLF--HHEGGVEVGDVDAKAQRL 152

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
              + +D    ++ + V     + ++    +         L+  + D   + LEINPL++
Sbjct: 153 --MVAVD--EKLSEDQVTEQL-LTQVPDDKKEVLASFIVGLFNLYEDLYFTYLEINPLVV 207

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NL 260
            ++G + VLD     D  A Y         +            E    +++AK      L
Sbjct: 208 TQDG-VYVLDMAAKIDATADYICKAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKL 266

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS- 317
           + +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S 
Sbjct: 267 TLLNPRGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSL 326

Query: 318 ---DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDI 366
              +   +G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   
Sbjct: 327 MTREKHSQGKVLIIGGSIANFTNVAATFKGIVRAIKDYQGPLKEHEVTIFVRRGGPNYQE 386

Query: 367 GNRLIAE----SGLNVITAID 383
           G R++ E    +G+ +     
Sbjct: 387 GLRVMGEVGKTTGIPIHVFGT 407


>gi|326934168|ref|XP_003213166.1| PREDICTED: ATP-citrate synthase-like isoform 2 [Meleagris
           gallopavo]
          Length = 1101

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 133/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V +  +L  V   +++ LG    T   
Sbjct: 49  WLLSERLVVKPDQLIKRRGKLGL----------VGINLTLDQVKLWLKQRLGQE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 97  NAKG-ILKNFLIEPFVPHRQEEEFYVCIYAAREGDCVLFY--HEGGVDVGDVDAKAQKLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
             + +D    +   DV             +         L+  + D   + LEINPL++ 
Sbjct: 154 --VAVD--EKLNESDVKKHLLQ-HAPADKKDILASFICGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKIDATADYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|326934166|ref|XP_003213165.1| PREDICTED: ATP-citrate synthase-like isoform 1 [Meleagris
           gallopavo]
          Length = 1091

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 133/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V +  +L  V   +++ LG    T   
Sbjct: 49  WLLSERLVVKPDQLIKRRGKLGL----------VGINLTLDQVKLWLKQRLGQE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 97  NAKG-ILKNFLIEPFVPHRQEEEFYVCIYAAREGDCVLFY--HEGGVDVGDVDAKAQKLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
             + +D    +   DV             +         L+  + D   + LEINPL++ 
Sbjct: 154 --VAVD--EKLNESDVKKHLLQ-HAPADKKDILASFICGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKIDATADYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|298707507|emb|CBJ30109.1| atp-citrate synthase [Ectocarpus siliculosus]
          Length = 1098

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 88/421 (20%), Positives = 152/421 (36%), Gaps = 66/421 (15%)

Query: 3   IHEYQAKAL----LRKYN--------VPV----AKGVVISSVHAAESAIKTLPGPLYVVK 46
           I EY  K L    + +Y         V V     +G   +     E     L     VVK
Sbjct: 6   IREYHGKRLVSKWISEYGDYDIENRCVQVKADMLQGGADAGFAKIEQDNSWLANTPLVVK 65

Query: 47  SQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
                  RGK             + V  +   V + I E +G    +++       ++  
Sbjct: 66  PDQLIKRRGKAGL----------LAVNKTWPEVKAWISERMGK---SQEVEVVTGILDTF 112

Query: 107 YVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG 164
            VE      +  E Y+ +  +R      F+   +GG+D+ +V      K  +L +     
Sbjct: 113 IVEPFVPHEQSDEYYVCINSNREGEE--FLFCHEGGVDVGDVDA----KADRLQVPIGDK 166

Query: 165 VTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
            T+ D+     + ++    +    D    L+K + D +   +EINP++++   R+  LD 
Sbjct: 167 ATASDIKE-ALLSKVPESRQDMLADFLAALFKLYIDLNFVYMEINPIVVVGE-RITPLDM 224

Query: 225 KISFDDNALYRHLDIQELRDV-----SEEDSREIEAKQHN--------LSYIALDGNIGC 271
               D+ A +         D        E   E   K+ +        L+ +   G +  
Sbjct: 225 AAKIDETASFLCGPKWGEIDFPAPFGRPEFPEEAYIKKLDGSTGASLKLTILNHSGRVWT 284

Query: 272 MVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDSSV----KGIL 325
           MV G G ++   D I  YG     AN+ +  G   +       K I    +     KG +
Sbjct: 285 MVAGGGASVVYADTISDYGYGKELANYGEYSGAPSEQMTYNYAKTILGLMTRVKDDKGKV 344

Query: 326 INIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLN 377
           + I GGI     +     GI++A+K+        NI + +R  G N   G R I E+G +
Sbjct: 345 LIIGGGIANFTDVAATFTGIITALKQYAEELRDGNISIWVRRAGPNYQEGLRKIRETGES 404

Query: 378 V 378
           +
Sbjct: 405 I 405


>gi|17557344|ref|NP_506267.1| hypothetical protein B0365.1 [Caenorhabditis elegans]
 gi|3873757|emb|CAB02690.1| C. elegans protein B0365.1, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 1099

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 78/392 (19%), Positives = 142/392 (36%), Gaps = 61/392 (15%)

Query: 30  AAESAIKTLPGP-LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
              +  + L      V+K       RGK    ++            S K + +   +   
Sbjct: 41  DVAAKYEWLAQDNKGVIKPDQLIKRRGKLGLVKIG-----------SPKELEAWFGKTAN 89

Query: 89  STLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
           S +   QT     R++   VE         E+Y+++  +R       +   QGG+DI +V
Sbjct: 90  SYVKVGQTEG---RLHTFIVEPFCAHTENEEMYIAIYSER--CRDVIMFYEQGGVDIGDV 144

Query: 147 AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLL 206
            +        + +D      SE    L  +L      + D      +LY+A+     + L
Sbjct: 145 EEKARSVHVPVQLDDNAMSISE--RELGVLLG-PCSDKDDIRKFVRSLYEAYKALHFTYL 201

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS-------------------- 246
           EINP ++  NG++ +LD     D+ A +   D    R+ S                    
Sbjct: 202 EINPFVLT-NGKIHILDLAAKLDETASFLCSDKWSGRNASARIAPTLEFPAPFGRDLTSE 260

Query: 247 EEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGG 301
           E+   +++AK      L+ +   G +  MV G G ++   D +   GG+   AN+ +  G
Sbjct: 261 EQYISDMDAKTGASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGSSELANYGEYSG 320

Query: 302 GADQDKVAAAFKIITSDS-----SVKGILINIFGGIMRCDVLVK---GILSAVKEV---- 349
              + +     K I S          G ++ I G I     + K   GI+ A +      
Sbjct: 321 DPSEAQTYEYAKTILSVMTEGAPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFETFIDKL 380

Query: 350 -KINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
            + N+ + +R  G N   G R + ++   +  
Sbjct: 381 KEHNVSIYVRRGGPNYQEGLRRVKDAATKLEI 412


>gi|73965865|ref|XP_861037.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 6 [Canis
           familiaris]
          Length = 1088

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|327275431|ref|XP_003222477.1| PREDICTED: LOW QUALITY PROTEIN: ATP-citrate synthase-like [Anolis
           carolinensis]
          Length = 1101

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V   L  V + ++  LG  L T   
Sbjct: 49  WLLTERLVVKPDQLIKRRGKLGL----------VGVNLDLDQVKTWLKPRLG--LETTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 97  KAKG-ILKNFLIEPFVPHKQAEEFYVCIYAAREGDYVLFY--HEGGVDVGDVDAKAQKLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            ++       +   D+     +L      +         L+  + D   + LEINPL++ 
Sbjct: 154 VRVD----EKLHESDIKKHL-LLHAPKDKQDILASFISGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NLS 261
            NG + VLD     D  A Y         D            E    +++AK      L+
Sbjct: 209 VNG-VYVLDLAAKIDATADYICKVKWGDVDFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|297701138|ref|XP_002827587.1| PREDICTED: ATP-citrate synthase-like [Pongo abelii]
          Length = 1058

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965875|ref|XP_861179.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 11
           [Canis familiaris]
          Length = 1097

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965881|ref|XP_861266.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 14
           [Canis familiaris]
          Length = 1101

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|126307954|ref|XP_001364183.1| PREDICTED: similar to ATP citrate lyase isoform 1 [Monodelphis
           domestica]
          Length = 1101

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 140/380 (36%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG  +   + 
Sbjct: 49  WLISQQLVVKPDQLIKRRGKLGL----------VGVNLNLDGVKSWLKTRLGKEITIAK- 97

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    + F    +GGMD+ +V      K 
Sbjct: 98  -AKG-ILKNFLIEPFVAHTQAEEFYICIYATREGDYILF--HHEGGMDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  +++     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGINEKLHPDNIKQHL-LVHAPDSKKEILASFISGLFHLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHL-DIQEL-------RDVSEEDSREIEAKQHNLSYIAL- 265
           K+G + +LD     D  A Y       +L       R+   E++   +    + + + L 
Sbjct: 209 KDG-VYILDLAAKIDATADYICKVKWGDLEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 266 ----DGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
                G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPQGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965867|ref|XP_861064.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 7
           [Canis familiaris]
          Length = 1103

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965863|ref|XP_861010.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 5 [Canis
           familiaris]
          Length = 1085

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965873|ref|XP_861149.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 10 [Canis
           familiaris]
          Length = 1087

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|74096325|ref|NP_001027756.1| ATP citrate-lyase [Ciona intestinalis]
 gi|9229902|dbj|BAB00624.1| ATP citrate-lyase [Ciona intestinalis]
          Length = 1101

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 82/385 (21%), Positives = 140/385 (36%), Gaps = 62/385 (16%)

Query: 29  HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
                    L     +VK       RGK    ++  D  G              +++ +G
Sbjct: 41  DELAVKHPWLLTEKLIVKPDQLIKRRGKLGLIKINTDYAG--------------VQQWVG 86

Query: 89  -STLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
              L     G T   +    +E         E Y+ +   R    + F    +GG++I +
Sbjct: 87  ERMLKEISIGETKGILKHFIIEPFVAHKQEEEFYICIHSSREEDTILF--HHEGGVNIGD 144

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDV--ASLCDMLELQGQARID---GGDLFPNLYKAFCD 200
           V      K  KL I     +T E      +   L L+  +R +         +LY+ +  
Sbjct: 145 VDA----KANKLHI-----LTGEKADSTKITTAL-LKSVSRENQRLLEPFILSLYEFYTS 194

Query: 201 KDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQ 257
              + LEINPL++  +G++ VLD     D  A +   R     E       ++   EA  
Sbjct: 195 LHFTYLEINPLVV-NDGKIYVLDLAAKLDQCAEFVCARTWGPVEFPPPFGREAYPEEAYI 253

Query: 258 HNLS----------YIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQ 305
            +L            +  +G I  MV G G ++   D I   GGA   AN+ +  G   +
Sbjct: 254 ADLDAKSGASLKLTILNPNGRIWTMVAGGGASVVYSDTICDLGGASELANYGEYSGAPSE 313

Query: 306 DKVAAAFKIITSDSSV----KGILINIFGGIMRCDVLV---KGILSAVKEVK-----INI 353
            +     + I S  +      G ++ I GGI     +    KGI+ A+K+ +       +
Sbjct: 314 QQTYDYARTILSLMTRTPRDDGKVLIIGGGIANFTNVAATFKGIVRALKQFQASLRSNKV 373

Query: 354 PLVMRLEGANVDIGNRLIAESGLNV 378
            + +R  G N   G R++ E G ++
Sbjct: 374 SIFVRRGGPNYQEGLRVMREVGQHL 398


>gi|73965857|ref|XP_850198.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 2
           [Canis familiaris]
 gi|73965885|ref|XP_861323.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 16
           [Canis familiaris]
 gi|73965887|ref|XP_861351.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 17
           [Canis familiaris]
          Length = 1101

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|297273034|ref|XP_001108114.2| PREDICTED: ATP-citrate synthase isoform 2 [Macaca mulatta]
          Length = 1011

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTVFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965871|ref|XP_861122.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 9 [Canis
           familiaris]
          Length = 1095

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965877|ref|XP_861212.1| PREDICTED: similar to ATP-citrate synthase (ATP-citrate
           (pro-S-)-lyase) (Citrate cleavage enzyme) isoform 12
           [Canis familiaris]
          Length = 1111

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|126307956|ref|XP_001364262.1| PREDICTED: similar to ATP citrate lyase isoform 2 [Monodelphis
           domestica]
          Length = 1091

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 140/380 (36%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG  +   + 
Sbjct: 49  WLISQQLVVKPDQLIKRRGKLGL----------VGVNLNLDGVKSWLKTRLGKEITIAK- 97

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    + F    +GGMD+ +V      K 
Sbjct: 98  -AKG-ILKNFLIEPFVAHTQAEEFYICIYATREGDYILF--HHEGGMDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  +++     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGINEKLHPDNIKQHL-LVHAPDSKKEILASFISGLFHLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHL-DIQEL-------RDVSEEDSREIEAKQHNLSYIAL- 265
           K+G + +LD     D  A Y       +L       R+   E++   +    + + + L 
Sbjct: 209 KDG-VYILDLAAKIDATADYICKVKWGDLEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 266 ----DGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
                G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPQGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|242014064|ref|XP_002427718.1| ATP-citrate synthase, putative [Pediculus humanus corporis]
 gi|212512153|gb|EEB14980.1| ATP-citrate synthase, putative [Pediculus humanus corporis]
          Length = 1093

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 132/371 (35%), Gaps = 51/371 (13%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             ++V +    V   I E +      ++ 
Sbjct: 47  WLGQEKLVVKCDQLIKRRGKLGL----------IQVNADYDKVKQWISERINRD---QKI 93

Query: 97  GPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
                ++    +E         E Y+ +   R    + F    +GG++I +V      K 
Sbjct: 94  QKAVGKLRNFIIEPFVPHADNEEFYVCIYSHRHGDTILF--HHEGGIEIGDVD----SKA 147

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            +L +          + ++   +    Q  I   +   +LYK + D   + LEINPL++ 
Sbjct: 148 LRLEVSVNENFDINRLKTILRNVSPSKQIII--AEFIQSLYKVYVDLYFTYLEINPLVVT 205

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREIEAKQHNLSYIAL- 265
            N  + VLD     D  A +    +           RD   E++   +    + + + L 
Sbjct: 206 -NESVYVLDMAAKVDATADFMCRTLWGEIDFPPPFGRDAYPEEAYIADLDSKSGASLKLT 264

Query: 266 ----DGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS 319
                G I  MV G G ++   D +    G    AN+ +  G   + +     K I S  
Sbjct: 265 ILNKKGRIWMMVAGGGASVIYADTLCDLCGVNELANYGEYSGAPSEQQTYEYAKTILSLM 324

Query: 320 SVK-------GILINIFGGIMRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIG 367
           + +        I+              KGI++A++E     V++N+ + +R  G N   G
Sbjct: 325 TQEPHPDGKILIIGGGIANFTNVAATFKGIVTALQEYQPRLVEMNVSIFVRRAGPNYQEG 384

Query: 368 NRLIAESGLNV 378
            R + E G N+
Sbjct: 385 LRRMREVGQNL 395


>gi|73965869|ref|XP_861090.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 8 [Canis
           familiaris]
          Length = 1089

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|603074|gb|AAB60340.1| ATP:citrate lyase [Homo sapiens]
          Length = 1101

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPDDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965861|ref|XP_860980.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 4 [Canis
           familiaris]
          Length = 1089

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|73965883|ref|XP_861298.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 15 [Canis
           familiaris]
          Length = 1091

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|301773523|ref|XP_002922169.1| PREDICTED: ATP-citrate synthase-like [Ailuropoda melanoleuca]
          Length = 1101

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFDFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|324502258|gb|ADY40994.1| ATP-citrate synthase [Ascaris suum]
          Length = 1117

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 87/421 (20%), Positives = 156/421 (37%), Gaps = 64/421 (15%)

Query: 3   IHEYQAKALLRKYN-----VPVAKGVVISSVHAAESA---IKTLP-GPLYVVKSQIHAGG 53
           I EY  K LL ++      V     V I      + A         G   V+K       
Sbjct: 6   ISEYTGKELLYRHLKRLDFVDKPIAVKIDDHDDFDKAISGATWFNEGRKGVIKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK    +                 + +     L +     Q G T  R++   VE   +
Sbjct: 66  RGKHGLVKWG--------------DLKTIREWYLSNKGKAVQVGKTTGRLHNFIVEPFVE 111

Query: 114 ILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDV 170
                E+Y+++L  R   ++ F    +GG+D+ ++     + +  + + +  + +   ++
Sbjct: 112 HNETDEMYMAILSRRDHDIIMFY--EKGGIDVGDIDIKARKLLVPVELGESSMELPETEL 169

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             L + +  + ++    G     LY  + D   + LEINPL+ M NG++ +LD     D+
Sbjct: 170 QRLVEPVAEEKRSL--VGTFIRELYNVYKDNFFTYLEINPLV-MNNGKVYILDLAAKLDE 226

Query: 231 NALY--------RHLDIQEL-----RDVSEEDSREIE-----AKQHNLSYIALDGNIGCM 272
            AL+        R  +  E      RD++ E+    +          L+ +   G I  M
Sbjct: 227 TALFLCSEKWKTRTGEAVEFPAPFGRDLTAEEQYIADLDAKTGASLKLTILNRHGRIWTM 286

Query: 273 VNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGIL 325
           V G G ++   D +   GGA   AN+ +  G   + +     K I            G +
Sbjct: 287 VAGGGASVVFADTVCDLGGAAELANYGEYSGDPSETQTYEYAKTILGVMTEGPPRPDGKV 346

Query: 326 INIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLN 377
           + I G I     +    KGI+ A +       +  + + +R  G N   G R + ESG  
Sbjct: 347 LIIGGSIANFTNVAMTFKGIVRAFETFQERLHEHRVTIYVRRGGPNYQEGLRKMKESGTK 406

Query: 378 V 378
           +
Sbjct: 407 L 407


>gi|73965879|ref|XP_861238.1| PREDICTED: similar to ATP citrate lyase isoform 2 isoform 13 [Canis
           familiaris]
          Length = 1094

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|194380758|dbj|BAG58532.1| unnamed protein product [Homo sapiens]
          Length = 1145

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 103 WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 149

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 150 GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 203

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 204 QKLLVGVDEKLNPEDIKKHL-LVHAPDDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 262

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 263 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 321

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 322 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 381

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 382 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 441

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 442 LRVMGEVGKTTGIPIHVFGT 461


>gi|156374103|ref|XP_001629648.1| predicted protein [Nematostella vectensis]
 gi|156216653|gb|EDO37585.1| predicted protein [Nematostella vectensis]
          Length = 1089

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 140/405 (34%), Gaps = 56/405 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVV-----ISSVHAAESA---IKTLPGPLYVVKSQIHAGGR 54
           I+E   K LL  Y +     V      I++    +        L      VK       R
Sbjct: 6   IYESDGKTLLSSY-LSCPNYVPNKFVEITNDTDWKKIEADTPWLKEEKLAVKPDQLIKRR 64

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           GK             ++V   ++   + I E +G  +   Q G +   +    +E     
Sbjct: 65  GKLGL----------IKVNVDIEQAKTWISERMGKDI---QVGSSCGPLKRFILEPFVAH 111

Query: 115 L--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E Y+ +   R    + F    +GG+DI +V      K  KL I     VT+  +  
Sbjct: 112 HQSEEHYVCIYAQRHCDTILFY--HEGGVDIGDVD----SKAIKLDIGLQEKVTAVWLEK 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
              M+ +  Q +    +    LY  F D   + LEINPL+++ + ++  LD     D  A
Sbjct: 166 TL-MINVPEQKKKPLAEFVHALYSLFTDLYFTYLEINPLVMVAD-KIYALDLAAKLDQTA 223

Query: 233 LYRHLDIQELRDVSEEDSREIEA-------KQHNLSYIALDGNIGCMVNGAGLAMATMDI 285
            +         D+        +A           L+ +   G I  MV G G ++   D 
Sbjct: 224 EFICKTKWG--DIEFPPPFGRDAFPEVHSGASLKLTILNRRGRIWTMVAGGGASVIYSDT 281

Query: 286 IKLYGG--APANFLDVGGGADQDKVAAAFKIITSDSS--------VKGILINIFGGIMRC 335
           I   GG    AN+ +  G   + +     K +    +           I+          
Sbjct: 282 ICDLGGAMELANYGEYSGAPSEGQTFEYAKTLLKLMTEGEPHPDGKILIIGGGIANFTNV 341

Query: 336 DVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
               KGI+ A++      ++ N+ + +R  G N   G R++ E G
Sbjct: 342 SATFKGIVRALQNFQKNLIEHNVEVFVRRGGPNYQEGLRIMREVG 386


>gi|148222521|ref|NP_001088255.1| ATP citrate lyase [Xenopus laevis]
 gi|54038148|gb|AAH84253.1| LOC495086 protein [Xenopus laevis]
          Length = 1091

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 140/380 (36%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG    T   
Sbjct: 49  WLLTEPLVVKPDQLIKRRGKLGL----------VGVNLNLEQVKSWLKLRLGHE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 97  KAKG-ILKNFLIEPFVPHKQEEEFYVCIYAAREGDYVLF--HHEGGVDVGDVD----SKA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +T + V S   ++ +    +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVGERLTEQQVKSHL-LIHVAQDNKEVLASFITGLFHLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NLS 261
           +NG + VLD     D  A Y         D            E    +++AK      L+
Sbjct: 209 QNG-VYVLDMAAKIDATADYICKAKWGDVDFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPRGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIG 367
             +  + G ++ I G I     +    KGI+ A+K+ +  +      + +R  G N   G
Sbjct: 328 TREKHLDGKVLIIGGSIANFTNVAATFKGIVRAIKDFQGPLKEHEVMIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|149723798|ref|XP_001495696.1| PREDICTED: ATP citrate lyase isoform 1 [Equus caballus]
          Length = 1101

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     ++ ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLSPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|68533125|dbj|BAE06117.1| ACLY variant protein [Homo sapiens]
          Length = 1137

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 85  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 131

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 132 GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 185

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 186 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 244

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 245 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 303

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 304 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 363

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 364 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 423

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 424 LRVMGEVGKTTGIPIHVFGT 443


>gi|149723800|ref|XP_001495733.1| PREDICTED: ATP citrate lyase isoform 2 [Equus caballus]
          Length = 1091

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     ++ ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLSPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|38569421|ref|NP_001087.2| ATP-citrate synthase isoform 1 [Homo sapiens]
 gi|116241237|sp|P53396|ACLY_HUMAN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; Short=ACL; AltName: Full=Citrate
           cleavage enzyme
 gi|13623199|gb|AAH06195.1| ATP citrate lyase [Homo sapiens]
 gi|119581183|gb|EAW60779.1| ATP citrate lyase, isoform CRA_b [Homo sapiens]
 gi|119581185|gb|EAW60781.1| ATP citrate lyase, isoform CRA_b [Homo sapiens]
 gi|168270894|dbj|BAG10240.1| ATP-citrate synthase [synthetic construct]
 gi|325463509|gb|ADZ15525.1| ATP citrate lyase [synthetic construct]
          Length = 1101

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|332260732|ref|XP_003279435.1| PREDICTED: ATP-citrate synthase [Nomascus leucogenys]
          Length = 1095

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|281344523|gb|EFB20107.1| hypothetical protein PANDA_011141 [Ailuropoda melanoleuca]
          Length = 1086

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLEGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKARGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++   G  +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDKKLNPEDIKKHL-LVHAPGDKKEILASFISGLFDFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKIDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|28935|emb|CAA45614.1| ATP-citrate (pro-S-)-lyase [Homo sapiens]
          Length = 1105

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 137/380 (36%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V+ +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVDLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E  A      E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFAPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPDDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                 +    E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGRVAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|308500690|ref|XP_003112530.1| hypothetical protein CRE_30753 [Caenorhabditis remanei]
 gi|308267098|gb|EFP11051.1| hypothetical protein CRE_30753 [Caenorhabditis remanei]
          Length = 1099

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 134/378 (35%), Gaps = 62/378 (16%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           VVK       RGK    ++            +   + +   +   + +   QT     R+
Sbjct: 56  VVKPDQLIKRRGKLGLVKIG-----------TPSELEAWFEKTANTYVKVGQTEG---RL 101

Query: 104 NCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKD-YPQKIFKLLID 160
           +   VE         E+Y+++  +R       +   QGG+DI +V +      I   L D
Sbjct: 102 HTFIVEPFCAHTDDEEMYIAIYSER--CRDVIMFYEQGGVDIGDVEEKARAVHIPVKLDD 159

Query: 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
             + +T      L  +L    + +        NLY+A+     + LEINP ++  NG++ 
Sbjct: 160 SEMSITE---RELDVLLG-PCKEKDVIRKFVKNLYEAYKTLHFTYLEINPFVLT-NGKIH 214

Query: 221 VLDSKISFDDNALYRHLDIQELRDVSEEDSREIE-----------------------AKQ 257
           +LD     D+ A +   D    R  S   +R IE                          
Sbjct: 215 ILDLAAKLDETANFLCSDKWSSRTASARIARSIEFPAPFGRDLTTEEQYISDMDAKTGAS 274

Query: 258 HNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII 315
             L+ +   G +  MV G G ++   D +   GGA   AN+ +  G   + +     K I
Sbjct: 275 LKLTILNRQGRVWTMVAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTI 334

Query: 316 TS-----DSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGA 362
            S          G ++ I G I     + K   GI+ A +       +  + + +R  G 
Sbjct: 335 LSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFETFIDKLKEHKVSIYVRRGGP 394

Query: 363 NVDIGNRLIAESGLNVIT 380
           N   G R + ++   +  
Sbjct: 395 NYQEGLRRVKDAATKLEI 412


>gi|332847769|ref|XP_511495.3| PREDICTED: ATP-citrate synthase [Pan troglodytes]
          Length = 1041

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|296202905|ref|XP_002748671.1| PREDICTED: ATP-citrate synthase [Callithrix jacchus]
          Length = 1091

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y         D            E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIDFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|38569423|ref|NP_942127.1| ATP-citrate synthase isoform 2 [Homo sapiens]
 gi|119581181|gb|EAW60777.1| ATP citrate lyase, isoform CRA_a [Homo sapiens]
 gi|119581182|gb|EAW60778.1| ATP citrate lyase, isoform CRA_a [Homo sapiens]
          Length = 1091

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|56118260|ref|NP_001008028.1| ATP citrate lyase [Xenopus (Silurana) tropicalis]
 gi|51703371|gb|AAH80908.1| acly protein [Xenopus (Silurana) tropicalis]
          Length = 1091

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 85/380 (22%), Positives = 140/380 (36%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG+   T   
Sbjct: 49  WLLTQPLVVKPDQLIKRRGKLGL----------VGVNLNLDQVKSWLKPRLGNE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 97  KAKG-ILKNFLIEPFVPHKQEEEFYVCIYAAREGDYVLF--HHEGGVDVGDVD----SKA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +T ++V S   ++ +    +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVGERLTEKEVKS-RLLIHVAQDKQEVLASFITGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y         +            E    +++AK      L+
Sbjct: 209 KDG-VYVLDMAAKIDATADYICKAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPRGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+K+ +  +      + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIKDFQCPLKEHEVMIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|148222492|ref|NP_001088452.1| hypothetical protein LOC495316 [Xenopus laevis]
 gi|54311201|gb|AAH84776.1| LOC495316 protein [Xenopus laevis]
          Length = 1101

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 85/380 (22%), Positives = 139/380 (36%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L+ V S ++  LG    T   
Sbjct: 49  WLLTEPLVVKPDQLIKRRGKLGL----------VGVNLNLEQVKSWLKARLGHE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 97  KAKG-ILKNFLIEPFVPHKQEEEYYVCIYAAREGDYVLF--HHEGGVDVGDVD----SKA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +T + V S   ++ +    +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVGERLTEQQVKSQL-LIHVAQDKKEVLSSFITGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NLS 261
           +NG + VLD     D  A Y         +            E    +++AK      L+
Sbjct: 209 QNG-VYVLDMAAKIDATADYICKAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPRGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+K+ +  +      + +R  G N   G
Sbjct: 328 TREKHSDGKILIIGGSIANFTNVAATFKGIVRAIKDSQGPLKEHEVMIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|74193875|dbj|BAE36874.1| unnamed protein product [Mus musculus]
 gi|123231522|emb|CAM27798.1| ATP citrate lyase [Mus musculus]
          Length = 491

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNTEDIKRHL-LVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|312066071|ref|XP_003136095.1| ATP-citrate synthase [Loa loa]
 gi|307768733|gb|EFO27967.1| ATP-citrate synthase [Loa loa]
          Length = 1113

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 88/418 (21%), Positives = 158/418 (37%), Gaps = 64/418 (15%)

Query: 3   IHEYQAKALLRKYN-----VPVAKGVVISSVHA---AESAIKTLPGPL-YVVKSQIHAGG 53
           I EY  K LL ++      V   + + ++S  +       IK L      V+K       
Sbjct: 6   ISEYTGKELLYRHLKELEFVEKPQALKLTSSDSFDVVTDKIKWLNHDKKAVIKPDQLIKR 65

Query: 54  RGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           RGK    +             ++  +     E+   ++   +       +    +E    
Sbjct: 66  RGKLGLVK-----------CGNVSVLRDWFNEMKNKSMQIDKVVGC---LRNFIMEPFCM 111

Query: 114 ILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDV 170
                E+Y++++  R   ++ F     GG+DI ++     +  F + ID   + +   DV
Sbjct: 112 HSESDEMYIAIISRREDDVILFY--EHGGVDIGDIDAKARKLYFPVDIDRKSVSIADHDV 169

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            SL   +E Q  + +        LY  + +   + LEINP +++ N ++ +LD     D+
Sbjct: 170 ESLIGPMESQKLSLLK--TFVKALYYVYKENCFTYLEINPFVLVNN-KIYILDLAAKLDE 226

Query: 231 NALYRHLDIQELRDVSEED-----SREIEAKQH-------------NLSYIALDGNIGCM 272
            AL+   +I + RD    D      R+  A++               L+ +   G I  M
Sbjct: 227 TALFLCSEIWKTRDGEPVDFPAPFGRDKMAEEKYVADLDSRTGASLKLTILNRRGRIWTM 286

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-----DSSVKGIL 325
           V G G ++   D I   GG    AN+ +  G   +       K I S         KG +
Sbjct: 287 VAGGGASVVYTDTICDLGGMSELANYGEYSGDPSEIMTYEYAKTILSVLTEGSPHPKGKI 346

Query: 326 INIFGGIMRCDVLVK---GILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           + I G I     + K   GI+ A++E      +  + + +R  G N   G R + E+G
Sbjct: 347 LIIGGSIANFTNVAKTFRGIIKAIEEYGELLHEHKVTIHVRRGGPNYQEGLRKMKETG 404


>gi|302566700|gb|ADL41159.1| ATP-citrate lyase [Anser anser anser]
          Length = 1091

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V +  +L  V   +++ LG    T   
Sbjct: 49  WLLSERLVVKPDQLIKRRGKLGL----------VGINLTLDQVKVWLKQRLGQE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 97  NAKG-ILKNFLIEPFVPHKQEEEFYVCIYAAREGDYVLF--HHEGGVDVGDVDAKAQKLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
             + +D    ++  DV             +         L+  + D   + LEINPL++ 
Sbjct: 154 --VAVD--EKLSESDVKKQLLQYA-PANKKDVLASFICGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKIDATADYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|298508701|pdb|3MWE|A Chain A, Truncated Human Atp-Citrate Lyase With Tartrate Bound
          Length = 425

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|78776769|ref|YP_393084.1| ATP-dependent citrate lyase beta subunit [Sulfurimonas
           denitrificans DSM 1251]
 gi|78497309|gb|ABB43849.1| ATP-dependent citrate lyase beta subunit [Sulfurimonas
           denitrificans DSM 1251]
          Length = 444

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 81/421 (19%), Positives = 143/421 (33%), Gaps = 58/421 (13%)

Query: 3   IHEYQAKALLRKY-NVPVAKG------VVISSVHAAESAIK---TLPGPLYVVKSQIHAG 52
           I E+ AK++L K+ +            V++ +    + A K    L     V K  +  G
Sbjct: 6   IREFDAKSILAKHWDKYFPNFTYAYETVMVQNGSELKKAAKEKTWLKDKKLVAKPDMLFG 65

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGS----RVNCVYV 108
            RGK           G V +  +   +     E            P+G      +    V
Sbjct: 66  KRGKNGLVLFRDSKPGDVSLTKASSWIDEKSGEKQSVYFSFDGDTPSGEAKVDMLTHFIV 125

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+S              S +GGM++EE      +  F +        T
Sbjct: 126 EPFTPHSQEEEYYISATCVGDDD--VLYMSAEGGMEVEENWDKVTEVAFPIT------AT 177

Query: 167 SEDVASLCDMLELQGQARID---GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            E++         +  A  D     D     ++A+ + + + LEINP ++    ++ +LD
Sbjct: 178 EEEIEKKIKASIPKDVAAKDKEAFADFAIGFFRAYRELNFAYLEINPFVLQG-KKVELLD 236

Query: 224 SKISFDDNALYRHLDIQ---------ELRDVSE-----EDSREIEAKQHNLSYIALDGNI 269
                DD A +   +            + + S      ED+         L+ +  +  +
Sbjct: 237 MVAKLDDTAGFMMREEWGDVDFPTSFGMEEKSPEVLAIEDADSKSGASLKLTILKPEARV 296

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 297 WTMVAGGGASVVYADTIADLAGIEDLANYGEYSGGPTTSETKFYAETILDLMTRDKDLKG 356

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANVDIGNRLIAE 373
           +  ++ I G I     + K   GI+ A      K  ++ I + +R  G N + G + I E
Sbjct: 357 RDKVLIIGGAIANFTDVAKTFTGIIQAFELYADKMKQVGIKIYVRRGGPNYEKGLKDIKE 416

Query: 374 S 374
           +
Sbjct: 417 A 417


>gi|82697335|ref|NP_001032534.1| ATP-citrate synthase [Bos taurus]
 gi|121957975|sp|Q32PF2|ACLY_BOVIN RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|79158721|gb|AAI08139.1| ATP citrate lyase [Bos taurus]
 gi|296476337|gb|DAA18452.1| ATP citrate lyase [Bos taurus]
          Length = 1091

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             + V  +L  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------IGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|84490419|ref|NP_001033711.1| ATP-citrate synthase [Ovis aries]
 gi|121957977|sp|Q2TCH3|ACLY_SHEEP RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|63364938|gb|AAY40742.1| ATP-citrate lyase [Ovis aries]
          Length = 1101

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 134/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 96  GKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLF--HHEGGVDVGDVDAKAQKLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
             + +D    +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 154 --VAVD--EKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|311267217|ref|XP_003131469.1| PREDICTED: ATP-citrate synthase-like [Sus scrofa]
          Length = 718

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 132/380 (34%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSESLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 96  GKARGFLKNFLIEPFVPHSQEEEFYVCIYAARDGDHVLF--HHEGGVDVGDVDAKAQRLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
               +     +  E +     ++      +         L+  + D   + LEINPL++ 
Sbjct: 154 ----VGVDEKLNPEAIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|71896389|ref|NP_001025711.1| ATP-citrate synthase [Gallus gallus]
 gi|60098703|emb|CAH65182.1| hypothetical protein RCJMB04_6f14 [Gallus gallus]
          Length = 1101

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 133/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V +  +L  V   +++ LG    T   
Sbjct: 49  WLLSERLVVKPDQLIKRRGKLGL----------VGINLTLDQVKVWLKQHLGQE--TTIA 96

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              G  +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 97  NAKG-ILKNFLIEPFVPHKQEEEFYVCIYAAREGDYVLFY--HEGGVDVGDVDAKAQKLL 153

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
             + +D    +   DV             +         L+  + D   + LEINPL++ 
Sbjct: 154 --VAVD--EKLNESDVKKHLLQ-HAPADKKDILASFICGLFNLYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKIDATADYICKVKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 ILNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+K+      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIKDYQGPLKEHEVRIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|162287306|ref|NP_058683.2| ATP-citrate synthase isoform 1 [Rattus norvegicus]
 gi|149054225|gb|EDM06042.1| ATP citrate lyase, isoform CRA_a [Rattus norvegicus]
          Length = 1101

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNAEDIKRHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|313151222|ref|NP_001186225.1| ATP-citrate synthase isoform 1 [Mus musculus]
 gi|74210124|dbj|BAE21336.1| unnamed protein product [Mus musculus]
 gi|123231524|emb|CAM27800.1| ATP citrate lyase [Mus musculus]
 gi|123236002|emb|CAM23024.1| ATP citrate lyase [Mus musculus]
          Length = 1101

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNTEDIKRHL-LVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|113116|sp|P16638|ACLY_RAT RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|203490|gb|AAA74463.1| ATP citrate-lyase [Rattus norvegicus]
          Length = 1100

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNAEDIKRHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|148670608|gb|EDL02555.1| ATP citrate lyase, isoform CRA_a [Mus musculus]
          Length = 1102

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNTEDIKRHL-LVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|297849424|ref|XP_002892593.1| hypothetical protein ARALYDRAFT_888357 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338435|gb|EFH68852.1| hypothetical protein ARALYDRAFT_888357 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 395

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 127/325 (39%), Gaps = 34/325 (10%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
            + ++        L     VVK  +  G RGK     L  D             V + ++
Sbjct: 24  TTDLNEVVEKEPWLSSEKLVVKPDMLFGKRGKSGLVALKLDF----------ADVATFVK 73

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
           + LG  +  + +G  G  +    VE       E YL+++ DR    ++F  S  GG++IE
Sbjct: 74  DRLGKEV--EMSGCKG-PITTFIVEPFVPHNEEFYLNVVSDRLLCSISF--SECGGIEIE 128

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           E       K+  + +     +T E  A L   L L+ +A I+  +    ++  F D D +
Sbjct: 129 ENW----DKVKTIFLPTGASLTPEICAPLVATLPLEIKAEIE--EFIKVIFTLFQDLDFT 182

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHN----L 260
            LE+NP  ++ +G    LD +  +  +  +       +   ++     ++ K  +     
Sbjct: 183 FLEMNPFTLV-DGSPYPLDMRGEW-GDIKFPMP-FGRVMSPTKSFIHRLDEKTTSASLKF 239

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKII--- 315
           + +   G I  MV G G  +   D +   G A    N+ +  G   +D+V    +++   
Sbjct: 240 TVLNPKGRIWTMVAGGGARVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYTRVVIDC 299

Query: 316 -TSDSSVKGILINIFGGIMRCDVLV 339
            T++   K   + I GGI     + 
Sbjct: 300 ATANPDGKSRALVIGGGIANFTDVA 324


>gi|157427728|ref|NP_001098772.1| ATP citrate lyase [Sus scrofa]
 gi|156140098|gb|ABU51323.1| ATP citrate lyase [Sus scrofa]
          Length = 1076

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 85/424 (20%), Positives = 143/424 (33%), Gaps = 65/424 (15%)

Query: 3   IHEYQAKALLRKYNVPVA-----KGVVISSVHAAESAI-----KTLPGPLYVVKSQIHAG 52
           I E   K LL KY +        +          + A        L     VVK      
Sbjct: 6   ILEQTGKELLYKY-ICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSESLVVKPDQLIK 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V V  +L  V S ++  LG        G     +    +E   
Sbjct: 65  RRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATVGKARGFLKNFLIEPFV 111

Query: 113 DI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E Y+ +   R    V F    +GG+D+ +V     + +    +     +  E +
Sbjct: 112 PHSQEEEFYVCIYAARDGDHVLF--HHEGGVDVGDVDAKAQRLL----VGVDEKLNPEAI 165

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                ++      +         L+  + D   + LEINPL++ K+G + VLD     D 
Sbjct: 166 KKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDA 223

Query: 231 NALYRH----------LDIQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAG 277
            A Y                      E    +++AK      L+ +   G I  MV G G
Sbjct: 224 TADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGG 283

Query: 278 LAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS----DSSVKGILINIFGG 331
            ++   D I   GG    AN+ +  G   + +     K I S    +   +G ++ I G 
Sbjct: 284 ASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGS 343

Query: 332 IMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAE----SGLNVI 379
           I     +    KGI+ A+++ +  +      + +R  G N   G R++ E    +G+ + 
Sbjct: 344 IANFTNVAATFKGIVRAIRDYQGPLKEHEATIFVRRGGPNYQEGLRVMGEVGKTTGIPIH 403

Query: 380 TAID 383
               
Sbjct: 404 VFGT 407


>gi|71004972|ref|XP_757152.1| hypothetical protein UM01005.1 [Ustilago maydis 521]
 gi|46096782|gb|EAK82015.1| hypothetical protein UM01005.1 [Ustilago maydis 521]
          Length = 1152

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 80/410 (19%), Positives = 139/410 (33%), Gaps = 72/410 (17%)

Query: 24  VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI 83
           V +S+  A      +     V K       RGK    +L  D               + I
Sbjct: 50  VTNSITDASQLPAWVQSSKLVAKPDQLIKRRGKAGLLKLNCDW----------ADAKTWI 99

Query: 84  REILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGM 141
           +E  G     +        +N   VE         E Y+ +   R    + F  + +GG+
Sbjct: 100 QERAGKAQKVETVTG---TLNNFIVEPFCPHPADTEFYVCINSAREGDWILF--THEGGV 154

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           D+ +V     + +  +  DP       +  +   +  +    R    D    LY  + D 
Sbjct: 155 DVGDVDAKALKLL--IPADPAAPFPKREEWTSTLLGGVPAAKREVLTDFLIRLYSVYVDL 212

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH-LDIQELRDVS-------------- 246
             + LEINPL+   +G++  LD     D  A +         RD S              
Sbjct: 213 HFAYLEINPLVATDDGQIAYLDMAAKLDQTADFICGPKWAIARDPSIYLGASAGASGNKG 272

Query: 247 --------------------EEDSREIEA---KQHNLSYIALDGNIGCMVNGAGLAMATM 283
                               E    +++A       L+ +   G I  MV G G ++   
Sbjct: 273 EDRGPPMYWPAPFGRDLTKEEAYIAKLDAGTGASLKLTVLNPTGRIWTMVAGGGASVVYS 332

Query: 284 DIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCD 336
           D I  +G A   AN+ +  G   + +     K +       + + +G L+ I GGI    
Sbjct: 333 DAIAAHGYAHELANYGEYSGAPSEGQTFEYAKTLLDLMTRGEVNPQGKLLIIGGGIANFT 392

Query: 337 VLV---KGILSAVKEVKIN-----IPLVMRLEGANVDIGNRLIAESGLNV 378
            +    KGI+ A+KE K++     + + +R  G N   G + +   G ++
Sbjct: 393 NVASTFKGIIRALKEYKLSLAKHGVRIFVRRGGPNYQEGLKAMRLLGEDL 442


>gi|161760632|ref|NP_001104565.1| ATP-citrate synthase isoform 2 [Rattus norvegicus]
 gi|149054226|gb|EDM06043.1| ATP citrate lyase, isoform CRA_b [Rattus norvegicus]
          Length = 1091

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNAEDIKRHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|29293809|ref|NP_598798.1| ATP-citrate synthase isoform 2 [Mus musculus]
 gi|21263374|sp|Q91V92|ACLY_MOUSE RecName: Full=ATP-citrate synthase; AltName: Full=ATP-citrate
           (pro-S-)-lyase; AltName: Full=Citrate cleavage enzyme
 gi|14193670|gb|AAK56080.1|AF332051_1 ATP citrate lyase [Mus musculus]
 gi|14193672|gb|AAK56081.1|AF332052_1 ATP citrate lyase [Mus musculus]
 gi|38614162|gb|AAH56378.1| ATP citrate lyase [Mus musculus]
 gi|123231523|emb|CAM27799.1| ATP citrate lyase [Mus musculus]
 gi|123236003|emb|CAM23025.1| ATP citrate lyase [Mus musculus]
 gi|148670609|gb|EDL02556.1| ATP citrate lyase, isoform CRA_b [Mus musculus]
          Length = 1091

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNTEDIKRHL-LVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|325066866|ref|ZP_08125539.1| succinyl-CoA synthetase subunit beta [Actinomyces oris K20]
          Length = 123

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 20/140 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
           M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1   MDLYEYQARNLFRQHGVPVLDGAVATTPEEARSAAQSLLDAGSELVVVKAQVKTGGRGKA 60

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     GGV++  + +   +  R+ILG  +        G  V  V + DG D+  E
Sbjct: 61  ----------GGVKLARTAEEAEARARDILGMDI-------KGHTVRAVLISDGVDLDAE 103

Query: 118 LYLSLLVDRTSGMVAFIAST 137
            Y S+L+DR       + S 
Sbjct: 104 YYFSILLDRAERQYLAMCSR 123


>gi|313227556|emb|CBY22703.1| unnamed protein product [Oikopleura dioica]
          Length = 899

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 89/416 (21%), Positives = 148/416 (35%), Gaps = 69/416 (16%)

Query: 3   IHEYQAKAL--------------LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           I E+ AK L              L    +PV      +S+ A+ S  +       V K  
Sbjct: 6   ISEFDAKRLVWNNINLSCVANKNLA---IPVNPATDFNSIRASYSWAQD---SSLVAKPD 59

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
                RGK             V+V+ SL         I          G T  ++    +
Sbjct: 60  QLIKRRGKLGL----------VKVKCSLDDA---AVWITDKQKDPFTIGNTSGKLKNFII 106

Query: 109 EDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E+Y+++   +    + F    +GG+DI +V     +K   L +D    + 
Sbjct: 107 EPFVAHEEKDEMYVAIYGTKAGDKILF--HHEGGVDIGDVD----EKAVSLDVDVDQKLK 160

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
             DV             +    +    L+  +     + +EINP+++ ++G++ +LD   
Sbjct: 161 KNDVEEKLLAGVKDADQKALVAEFIVGLFAVYRKLYFAYMEINPIVV-RDGKIYILDLAA 219

Query: 227 SFDDNALYRH-LDIQEL-------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMV 273
             D  A Y    +   L       RD   E+    E    + S + L      GNI  MV
Sbjct: 220 KLDQCAEYICSREWGSLTFPPPFGRDAFPEEKYIAELDAKSGSSMKLTIMNPKGNIWTMV 279

Query: 274 NGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITS----DSSVKGILIN 327
            G G ++   D I   GG    AN+ +  G   + +     + I S        +G  + 
Sbjct: 280 AGGGASVIYSDTICELGGTSELANYGEYSGAPSEQQTYDYARTILSLLTRYPHPEGKKLI 339

Query: 328 IFGGIMRCDVLV---KGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLIAESG 375
           I GGI     +    KGI+ A+KE ++        + +R  G N   G R++ E G
Sbjct: 340 IGGGIANFTNVAATFKGIVRALKEYQMQLQEHKTQIFVRRGGPNYQEGLRIMKELG 395


>gi|71680955|gb|AAI00619.1| Acly protein [Rattus norvegicus]
          Length = 1091

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 136/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E       + E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQVEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNAEDIKRHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|50540366|ref|NP_001002649.1| ATP-citrate synthase [Danio rerio]
 gi|49904342|gb|AAH76484.1| ATP citrate lyase [Danio rerio]
          Length = 1092

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 136/381 (35%), Gaps = 56/381 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITK-Q 95
            L     VVK       RGK     +  D  G              ++E L + L+ +  
Sbjct: 49  WLLTERLVVKPDQLIKRRGKLGLVGVNLDLNG--------------VKEWLKTRLMQETM 94

Query: 96  TGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
            G     +    +E         E Y+ +   R    + F    +GG+D+ +V      K
Sbjct: 95  VGKAKGILKNFLIEPFVAHKQEEEFYVCIYATREGDYMLF--HHEGGVDVGDVD----SK 148

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
             KLL+     ++++ V S   +       +         L+  + D   + LEINPL++
Sbjct: 149 ALKLLVGVDEKISADTVKSQL-LTHAPADKKEILSSFLVGLFNLYEDLYFTYLEINPLVV 207

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NL 260
            K+G + VLD     D  A Y         +            E    +++AK      L
Sbjct: 208 TKDG-VYVLDMAAKIDATADYLCKAKWGDVEFPPPFGREAYPEEAYIADLDAKSGASLKL 266

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS- 317
           + +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S 
Sbjct: 267 TLLNPRGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSL 326

Query: 318 ---DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDI 366
              +    G ++ I G I     +    KGI+ A K+      +  + + +R  G N   
Sbjct: 327 MTREKHPDGKVLIIGGSIANFTNVAATFKGIVRAFKDYQDPLKEHEVTIFVRRGGPNYQE 386

Query: 367 GNRLIAE----SGLNVITAID 383
           G R++ E    +G+ +     
Sbjct: 387 GLRVMGEVGKTTGIPIHVFGT 407


>gi|326497339|dbj|BAK02254.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1102

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 79/413 (19%), Positives = 146/413 (35%), Gaps = 57/413 (13%)

Query: 3   IHEYQAKALLRKYNVP----VAKGVV---ISSVHAAESAI-KTLPGPLYVVKSQIHAGGR 54
           I E+  K L+ ++       V  GVV     +V     A    L     VVK       R
Sbjct: 6   IREFDGKLLMSRWLKANSDFVLPGVVQIKADTVIPDLPARHDWLLESKLVVKPDQLIKRR 65

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           GK             +++ +SL  V+  + + +   +  +Q       ++   VE     
Sbjct: 66  GKAGL----------IKLNASLNDVMEWVNQRMNKEVQVEQVAG---LLDHFIVEPFIPH 112

Query: 115 L--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
               E Y+ +   RT   + F    +GG+D+ +V      K  +LL+  +   + ED+++
Sbjct: 113 KPTDEYYICINSQRTGDEILFY--HEGGVDVGDVDA----KALRLLVPIMSSPSIEDIST 166

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
              + ++              L++ +     + LEINPL+++ +  +  LD     D+ A
Sbjct: 167 KL-LAQVPKARVARLALFISKLFEMYAKLHFAYLEINPLVMLDDLSVIPLDLAAKLDETA 225

Query: 233 LYRHLDIQEL--------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLA 279
            +                R  S E++   E          L+ +  +G I  M+ G G +
Sbjct: 226 KFECSKHWGSIEFPAAFGRPPSPEEAYIQELDSSTGASLKLTVLNPNGRIWTMIAGGGAS 285

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-------SDSSVKGILINIFG 330
           +   D I   GG    AN+ +  G   +       K I         D     I+     
Sbjct: 286 VIYADTIVDLGGGAELANYGEYSGAPSESATYEYAKTILKLMTKVKRDDGKILIIGGGIA 345

Query: 331 GIMRCDVLVKGILSAVKEVKIN-----IPLVMRLEGANVDIGNRLIAESGLNV 378
                    KGI+ A+ E         I + +R  G N   G  ++ +  +++
Sbjct: 346 NFTNVADTFKGIIRALTEFADTIRAHGIKIFVRRGGPNYQEGLNMMRQLAVDL 398


>gi|10802763|gb|AAG23603.1|AF244654_1 hypothetical succinyl-CoA synthetase [Carboxydothermus
           hydrogenoformans]
          Length = 146

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/133 (42%), Positives = 90/133 (67%), Gaps = 1/133 (0%)

Query: 250 SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVA 309
               +++   +S++ LDG+I  M NGAG+ MAT+D+I  +GG P NF+D GGGA+ +++A
Sbjct: 11  PVGKKSRGIGVSFVELDGDIAVMANGAGITMATLDLIAYFGGRPKNFMDAGGGANAEQMA 70

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
            A  ++ S ++ K ILINIFGGI RCD + K  L+  +E +I +P+V+RL G N DIG +
Sbjct: 71  KALDLLIS-TNPKAILINIFGGITRCDEVAKAYLTVKQEREITVPVVIRLVGTNEDIGVK 129

Query: 370 LIAESGLNVITAI 382
           ++ E+G+   ++ 
Sbjct: 130 MLQEAGVESFSSA 142


>gi|74146613|dbj|BAE41315.1| unnamed protein product [Mus musculus]
          Length = 1091

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + + D+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNTGDIKRHL-LVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|298508699|pdb|3MWD|A Chain A, Truncated Human Atp-Citrate Lyase With Citrate Bound
          Length = 425

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 132/380 (34%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  +L  V S ++  LG        
Sbjct: 49  WLLSQNLVVKPDQLIKRRGKLGL----------VGVNLTLDGVKSWLKPRLGQE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     +  ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNPEDIKKHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + VLD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +   G I   V G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKGRIWTXVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLX 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R+  E    +G+ +     
Sbjct: 388 LRVXGEVGKTTGIPIHVFGT 407


>gi|308489338|ref|XP_003106862.1| hypothetical protein CRE_17185 [Caenorhabditis remanei]
 gi|308252750|gb|EFO96702.1| hypothetical protein CRE_17185 [Caenorhabditis remanei]
          Length = 1112

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 141/395 (35%), Gaps = 61/395 (15%)

Query: 26  SSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
            S     +  + L      V+K       RGK    ++            + + + +   
Sbjct: 37  ESFDEIANKYEWLARDNKGVIKPDQLIKRRGKLGLVKIG-----------TPQELKTWFE 85

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMD 142
           +   + +   QT     R++   VE         E+Y+++  +RT      +    GG+D
Sbjct: 86  KTGNTHVKVGQTEG---RLHTFIVEPFCAHTEKDEMYIAIFSERTRD--VIMFYEHGGVD 140

Query: 143 IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKD 202
           I +V +        + +D    ++  D   L  +L     +          LYKA+ D  
Sbjct: 141 IGDVEEKARSVSIPVQLD-NKAMSPSD-EELSTLLGPVKDS-ELIRKFVVELYKAYKDLH 197

Query: 203 MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELR------------------- 243
            + LEINP +++ N ++ VLD     D+ A +   D  + R                   
Sbjct: 198 FTYLEINPFVLLNN-QIHVLDLAAKLDETANFLCADKWKSRLTPYGGPNHVEFPAPFGRD 256

Query: 244 -DVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFL 297
               E+   +++AK      L+ +   G +  MV G G ++   D +   GGA   AN+ 
Sbjct: 257 LTTEEQYISDMDAKTGASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGATELANYG 316

Query: 298 DVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIMRCDVLVK---GILSAVKEV 349
           +  G   + +     K I S          G ++ I G I     + K   GI+ A +  
Sbjct: 317 EYSGDPSESQTYEYAKTILSVMTEGAPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFETF 376

Query: 350 -----KINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                +  + + +R  G N   G R I ++   + 
Sbjct: 377 VSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLE 411


>gi|309361866|emb|CAP29152.2| hypothetical protein CBG_09435 [Caenorhabditis briggsae AF16]
          Length = 1111

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 141/391 (36%), Gaps = 63/391 (16%)

Query: 30  AAESAIKTLPGP-LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
              +  + L      V+K       RGK    ++            +   + +   +   
Sbjct: 47  EVSAKYEWLAQDNKGVIKPDQLIKRRGKLGLVKIG-----------TPAELEAWFDKTAN 95

Query: 89  STLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
           + +   QT     R++   VE         E+Y+++  +R       +    GG+DI +V
Sbjct: 96  TYIKVGQTEG---RLHTFIVEPFCAHSEDEEMYIAIYSER--CRDVIMFYEHGGVDIGDV 150

Query: 147 AKD-YPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
            +      I   L D  + +T  ++  L        + +        NLY+A+     + 
Sbjct: 151 EEKARAVHIPVQLNDNEMTITERELDMLLG----PCKEKDIIRKFVLNLYEAYKALHFTY 206

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHL----------------DIQEL--RDVS- 246
           LEINP ++  NG++ VLD     D+ A +                   +      RD++ 
Sbjct: 207 LEINPFVLT-NGKIHVLDLAAKLDETANFLCSDRWSSRSASSRITRSIEFPAPFGRDLTV 265

Query: 247 -EEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVG 300
            E+   +++AK      L+ +   G +  MV G G ++   D +   GGA   AN+ +  
Sbjct: 266 EEQYISDMDAKTGASLKLTILNRQGRVWTMVAGGGASVVFTDTVCDLGGANELANYGEYS 325

Query: 301 GGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLVK---GILSAVKEV--- 349
           G   + +     K I S          G ++ I G I     + K   GI+ A +     
Sbjct: 326 GDPSESQTYEYAKTILSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFETFIDK 385

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNV 378
             +  + + +R  G N   G R + ++   +
Sbjct: 386 LKEHKVSIYVRRGGPNYQEGLRRVKDAATKL 416


>gi|268557936|ref|XP_002636958.1| Hypothetical protein CBG09435 [Caenorhabditis briggsae]
          Length = 1099

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 141/391 (36%), Gaps = 63/391 (16%)

Query: 30  AAESAIKTLPGP-LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
              +  + L      V+K       RGK    ++            +   + +   +   
Sbjct: 41  EVSAKYEWLAQDNKGVIKPDQLIKRRGKLGLVKIG-----------TPAELEAWFDKTAN 89

Query: 89  STLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
           + +   QT     R++   VE         E+Y+++  +R       +    GG+DI +V
Sbjct: 90  TYIKVGQTEG---RLHTFIVEPFCAHSEDEEMYIAIYSER--CRDVIMFYEHGGVDIGDV 144

Query: 147 AKD-YPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
            +      I   L D  + +T  ++  L        + +        NLY+A+     + 
Sbjct: 145 EEKARAVHIPVQLNDNEMTITERELDMLLG----PCKEKDIIRKFVLNLYEAYKALHFTY 200

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHL----------------DIQEL--RDVS- 246
           LEINP ++  NG++ VLD     D+ A +                   +      RD++ 
Sbjct: 201 LEINPFVLT-NGKIHVLDLAAKLDETANFLCSDRWSSRSASSRITRSIEFPAPFGRDLTV 259

Query: 247 -EEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVG 300
            E+   +++AK      L+ +   G +  MV G G ++   D +   GGA   AN+ +  
Sbjct: 260 EEQYISDMDAKTGASLKLTILNRQGRVWTMVAGGGASVVFTDTVCDLGGANELANYGEYS 319

Query: 301 GGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLVK---GILSAVKEV--- 349
           G   + +     K I S          G ++ I G I     + K   GI+ A +     
Sbjct: 320 GDPSESQTYEYAKTILSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFETFIDK 379

Query: 350 --KINIPLVMRLEGANVDIGNRLIAESGLNV 378
             +  + + +R  G N   G R + ++   +
Sbjct: 380 LKEHKVSIYVRRGGPNYQEGLRRVKDAATKL 410


>gi|157104411|ref|XP_001648397.1| hypothetical protein AaeL_AAEL004051 [Aedes aegypti]
 gi|108880381|gb|EAT44606.1| hypothetical protein AaeL_AAEL004051 [Aedes aegypti]
          Length = 253

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 35/179 (19%)

Query: 217 GRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGA 276
           G++  +D+K++FDDNA +   DI  +    + D +EIE          L G         
Sbjct: 56  GQVISVDAKLNFDDNAQFGQKDIFAMDVHEDTDPKEIEIHN------QLPGR-------- 101

Query: 277 GLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD 336
                         G   N         + +V    +I+TSD +VK IL+NIFG I+   
Sbjct: 102 --------------GRQCN-------VKEKQVLKTLQILTSDPNVKAILVNIFGEIVNFT 140

Query: 337 VLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            +  GI++A K + + +PLV+RL+G NVD   +++ ESGL + +  +L++AA+K ++  
Sbjct: 141 TIADGIVNATKTIGLKVPLVVRLKGTNVDAAKKILEESGLMIESVHELEEAAKKTINYA 199


>gi|17551266|ref|NP_508280.1| hypothetical protein D1005.1 [Caenorhabditis elegans]
 gi|1703082|sp|P53585|ACLY_CAEEL RecName: Full=Probable ATP-citrate synthase; AltName:
           Full=ATP-citrate (pro-S-)-lyase; AltName: Full=Citrate
           cleavage enzyme
 gi|1326262|gb|AAB00585.1| Hypothetical protein D1005.1 [Caenorhabditis elegans]
          Length = 1106

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 143/396 (36%), Gaps = 63/396 (15%)

Query: 26  SSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
            +     +  + L      V+K       RGK    ++            + + + +   
Sbjct: 37  ENFDEIANKYEWLARDNKGVIKPDQLIKRRGKLGLVKIG-----------TPQELKAWFE 85

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMD 142
           +   S +   QT     R++   VE         E+Y+++  +R       +   QGG+D
Sbjct: 86  KTGDSYVRVGQTEG---RLHTFIVEPFCAHTEKDEMYIAIYSERFRD--VIMFYEQGGVD 140

Query: 143 IEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK 201
           I +V +        + ++   +  + E++ +L   L+     R         LYKA+ D 
Sbjct: 141 IGDVEEKARTVSVPVQLNENAMTPSDEELTTLLGPLKDSDIVR----RFVVELYKAYKDL 196

Query: 202 DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH-------------LDIQEL-----R 243
             + LEINP +++ N ++ VLD     D+ A +                +  E      R
Sbjct: 197 HFTYLEINPFVLLNN-QIHVLDLAARLDETANFLCADKWKSRLTPYGGPNHVEFPAPFGR 255

Query: 244 DVSEEDSREIEAKQH-----NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANF 296
           D++ E+    E          L+ +   G +  MV G G ++   D +   GGA   AN+
Sbjct: 256 DLTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGASELANY 315

Query: 297 LDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLVK---GILSAVKE 348
            +  G   + +     K + S          G ++ I G I     + K   GI+ A + 
Sbjct: 316 GEYSGDPSESQTYEYAKTLLSVMTEGTPRPDGKVLIIGGSIANFTNVAKTFGGIVRAFET 375

Query: 349 V-----KINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                 +  + + +R  G N   G R I ++   + 
Sbjct: 376 FVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLE 411


>gi|145615655|ref|XP_360366.2| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15]
 gi|145022445|gb|EDK06465.1| hypothetical protein MGG_05740 [Magnaporthe oryzae 70-15]
          Length = 1341

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 34/182 (18%)

Query: 249  DSREIEAKQHNLSYIALDGN------IGCMVNGAGLAMATMDIIKL--------YGGA-- 292
            D  E EA  H +++ +L         IG + NGAGLAM  +D +           GG   
Sbjct: 934  DPVEAEAATHGITHFSLPTEPHQRRCIGVLSNGAGLAMNMIDALHAELGRRRVAAGGRGA 993

Query: 293  -----PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
                  ANFLD GG A  + ++     I  D  V+ + +NIFGGI+R DV+ +G++ A+K
Sbjct: 994  EEDVAVANFLDTGGKATSETISRCLGWILRDERVRVVFVNIFGGIIRGDVIAEGLIMALK 1053

Query: 348  EV------------KINIPLVMRLEGANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHA 394
            E+            +  +PLV+R+ G     G  L+AESGL+ V    D   AA   V  
Sbjct: 1054 EMRQGGAVCGQGTGRAAVPLVVRIRGTREKEGQALLAESGLDGVYVFDDFHRAADMAVEL 1113

Query: 395  VK 396
             K
Sbjct: 1114 AK 1115


>gi|117926913|ref|YP_867530.1| ATP-grasp domain-containing protein [Magnetococcus sp. MC-1]
 gi|117610669|gb|ABK46124.1| ATP-grasp domain protein [Magnetococcus sp. MC-1]
          Length = 424

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 76/345 (22%), Positives = 130/345 (37%), Gaps = 31/345 (8%)

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            K V + ++E         Q G   ++   V  E   +   E+Y S+             
Sbjct: 65  AKDVQTALKEKERLYFAEHQHGNAYAKAEGVTFESFVEAKYEVYFSITDSTKYRAPTVTI 124

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
           +  GG+DIEE+    P+KI  +  DPL G     V++    L    +         P L+
Sbjct: 125 THHGGVDIEELP---PEKIATVPFDPLTGFKGFVVSNALTRLGAPNEIISPLVQNLPKLW 181

Query: 196 KAFCDKDMSLLEINPLIIMKN--GRL--RVLDSKISFD-DNALYRHLDIQ---ELRDVS- 246
             + +  M+ LE+NP+ +M +  GRL     D K SFD D+     L++    ++ D S 
Sbjct: 182 DLYHNYGMTTLELNPIRMMPDASGRLVPVACDFKCSFDGDDPNVERLNLPTDLDMADYSN 241

Query: 247 ---EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA 303
              E +       Q ++  I   G+I  M  G G   A   + +  G       D GG  
Sbjct: 242 FEMEVNQLRTYQGQSDVYVINDQGSITAMTFGGG---ANALVTEQLGDRATISSDFGGNP 298

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAVKE-----VKINIPL 355
              K+    +I       +  +  I GG      + +   G+  A++E         + +
Sbjct: 299 PYQKMYDISRITMKYWIKQSNVFFIIGGKANNTDIFETFRGMADALREYFGEYGPTPLYV 358

Query: 356 VMRLEGANVDIGNRLIAES----GLNVITAIDLDDAAQKIVHAVK 396
           V+   G N+  G   + ++    GL        D A  ++V+  K
Sbjct: 359 VVGRGGPNLIRGMGYLKDTLDALGLPYRFF-GYDSAMSEVVNYAK 402


>gi|74204023|dbj|BAE29010.1| unnamed protein product [Mus musculus]
          Length = 1034

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 135/380 (35%), Gaps = 54/380 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL++ 
Sbjct: 150 QKLLVGVDEKLNTEDIKRHL-LVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVT 208

Query: 215 KNGRLRVLDSKISFDDNALYRH----------LDIQELRDVSEEDSREIEAKQH---NLS 261
           K+G + +LD     D  A Y                      E    +++AK      L+
Sbjct: 209 KDG-VYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLT 267

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-- 317
            +     I  MV G G ++   D I   GG    AN+ +  G   + +     K I S  
Sbjct: 268 LLNPKVRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLM 327

Query: 318 --DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIG 367
             +   +G ++ I G I     +    KGI+ A+++      +  + + +R  G N   G
Sbjct: 328 TREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEG 387

Query: 368 NRLIAE----SGLNVITAID 383
            R++ E    +G+ +     
Sbjct: 388 LRVMGEVGKTTGIPIHVFGT 407


>gi|268569740|ref|XP_002648327.1| Hypothetical protein CBG24512 [Caenorhabditis briggsae]
          Length = 1112

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 79/423 (18%), Positives = 139/423 (32%), Gaps = 71/423 (16%)

Query: 5   EYQAKALLRKYNV---P----VAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGK 56
           E+  K       +   P    V  G    S     +    L      V+K       RGK
Sbjct: 19  EFSGKEYFESSGLLFSPHAFHVKAG---DSFAEIANKYDWLVRDNKAVIKPDQLIKRRGK 75

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                +            + + + +   +   + +   QT     R++   VE       
Sbjct: 76  LGLVNIG-----------TPQELKAWFEKTANTYVKIGQTEG---RLHTFIVEPFCAHTE 121

Query: 117 --ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
             E+Y+++  +R       +    GG+DI +V +        + +D      SE+   L 
Sbjct: 122 KDEMYIAIFSER--SRDVIMFYEHGGVDIGDVEEKARSVSISVQLDNKAMAISEE--ELT 177

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
            +L    +           LY A+ D   + LEINP +++ + ++ VLD     D+ A +
Sbjct: 178 HLLG-PVKDNKVVRKFVLELYGAYKDLHFTYLEINPFVVLND-KVHVLDLAAKLDETANF 235

Query: 235 RHLDIQELRDVSEEDSREIE-----------------------AKQHNLSYIALDGNIGC 271
              D  E R         +E                            L+ +   G +  
Sbjct: 236 LCADKWESRMTPYGGPNHVEFPAPFGRDLTSEEQYISDMDAKTGASLKLTILNRKGRVWT 295

Query: 272 MVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS-----SVKGI 324
           MV G G ++   D +   GGA   AN+ +  G   + +     K I S          G 
Sbjct: 296 MVAGGGASVVFTDTVCDLGGATELANYGEYSGDPSESQTYEYAKTILSVMTEGAPRPDGK 355

Query: 325 LINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           ++ I G I     + K   GI+ A      K  +  + + +R  G N   G R I ++  
Sbjct: 356 VLIIGGSIANFTNVAKTFGGIVRAFESFVSKLKEHKVTIFVRRGGPNYQEGLRKIKDAAT 415

Query: 377 NVI 379
            + 
Sbjct: 416 KLE 418


>gi|55957257|emb|CAI15151.1| succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
          Length = 154

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 64/124 (51%)

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           +     I S+ GG++IE+VA + P+ I K  ID   G+  E    L   +          
Sbjct: 29  AQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESA 88

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSE 247
            +    LY  F   D +++EINP++   +G +  +D+KI+FD N+ YR   I +L+D ++
Sbjct: 89  AENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQ 148

Query: 248 EDSR 251
           ED R
Sbjct: 149 EDER 152


>gi|70938599|ref|XP_739953.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56517325|emb|CAH80172.1| hypothetical protein PC000760.03.0 [Plasmodium chabaudi chabaudi]
          Length = 192

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 6/149 (4%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGK 56
           ++IHEY +  LLR  N+P  +G    +   AE     L         V+K+QI +GGRG 
Sbjct: 46  LSIHEYLSIDLLRNNNIPCPQGYHAQTPEEAEEKALELQNACGDIDLVIKAQILSGGRGL 105

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
           G FKE     +GGV +  +   +     ++L +TL+TKQTGP G + N V++ +   I +
Sbjct: 106 GYFKE--NKFEGGVHICRNSMEIKDVASKMLNNTLVTKQTGPEGKKCNTVFICERFYIRK 163

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           E Y++ L+DR S  +  + S+ GG  IE+
Sbjct: 164 ERYVAFLLDRNSDNICLLGSSVGGSSIED 192


>gi|309366645|emb|CAP21104.2| hypothetical protein CBG_24512 [Caenorhabditis briggsae AF16]
          Length = 1106

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 80/427 (18%), Positives = 142/427 (33%), Gaps = 75/427 (17%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVH-----------AAESAIKTL-PGPLYVVKSQIHAG 52
           E+  K +L KY        ++ S H              +    L      V+K      
Sbjct: 8   EFSGKEVLYKY---FESSGLLFSPHAFHVKAGDSFAEIANKYDWLVRDNKAVIKPDQLIK 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK     +            + + + +   +   + +   QT     R++   VE   
Sbjct: 65  RRGKLGLVNIG-----------TPQELKAWFEKTANTYVKIGQTEG---RLHTFIVEPFC 110

Query: 113 DILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
                 E+Y+++  +R       +    GG+DI +V +        + +D      SE+ 
Sbjct: 111 AHTEKDEMYIAIFSER--SRDVIMFYEHGGVDIGDVEEKARSVSISVQLDNKAMAISEE- 167

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             L  +L    +           LY A+ D   + LEINP +++ + ++ VLD     D+
Sbjct: 168 -ELTHLLG-PVKDNKVVRKFVLELYGAYKDLHFTYLEINPFVVLND-KVHVLDLAAKLDE 224

Query: 231 NALYRHLDIQELRDVSEEDSREIE-----------------------AKQHNLSYIALDG 267
            A +   D  E R         +E                            L+ +   G
Sbjct: 225 TANFLCADKWESRMTPYGGPNHVEFPAPFGRDLTSEEQYISDMDAKTGASLKLTILNRKG 284

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS-----S 320
            +  MV G G ++   D +   GGA   AN+ +  G   + +     K I S        
Sbjct: 285 RVWTMVAGGGASVVFTDTVCDLGGATELANYGEYSGDPSESQTYEYAKTILSVMTEGAPR 344

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANVDIGNRLIA 372
             G ++ I G I     + K   GI+ A      K  +  + + +R  G N   G R I 
Sbjct: 345 PDGKVLIIGGSIANFTNVAKTFGGIVRAFESFVSKLKEHKVTIFVRRGGPNYQEGLRKIK 404

Query: 373 ESGLNVI 379
           ++   + 
Sbjct: 405 DAATKLE 411


>gi|21410180|gb|AAH30947.1| Suclg2 protein [Mus musculus]
          Length = 115

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/103 (50%), Positives = 74/103 (71%)

Query: 284 DIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGIL 343
           DII L GG PANFLD+GGG  + +V  AFK++TSD  V+ IL+NIFGGI+ C ++  GI 
Sbjct: 1   DIIFLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGIT 60

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            A +E+++ +PLV+RLEG NV     ++  SGL + +A+DL+D
Sbjct: 61  KACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 103


>gi|47204551|emb|CAF96059.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 615

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/310 (22%), Positives = 118/310 (38%), Gaps = 37/310 (11%)

Query: 96  TGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
            G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K
Sbjct: 1   VGKARGVLKNFLIEPFVPHKQEEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----K 54

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
             KLLI     ++ + V      L +    +         L+  + D   + LEINPL++
Sbjct: 55  AKKLLIGVDEKISEDTVKKELLPL-VPNHKKSVLSSFIIGLFNLYEDLFFTYLEINPLVV 113

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NL 260
            K+G + VLD     D  A Y         D            E    +++AK      L
Sbjct: 114 TKDG-VFVLDMAAKIDATADYICKAKWGDVDFPPPFGREAYPEEAYIADLDAKSGASLKL 172

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS- 317
           + +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S 
Sbjct: 173 TLLNPRGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSL 232

Query: 318 ---DSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKIN-----IPLVMRLEGANVDI 366
              +   +G ++ I G I     +    KGI+ A+K+ ++      + + +R  G N   
Sbjct: 233 MTREKHPEGKVLIIGGSIANFTNVAATFKGIVRAIKDYQVPLKENEVTIFVRRGGPNYQE 292

Query: 367 GNRLIAESGL 376
           G R++ E G+
Sbjct: 293 GLRVMGEVGV 302


>gi|255640311|gb|ACU20444.1| unknown [Glycine max]
          Length = 266

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 31/248 (12%)

Query: 2   NIHEYQAKALLRKY-------NVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAG 52
            I EY +K LL+++       ++ +    V  S    E   +   L     VVK  +  G
Sbjct: 5   KIREYHSKRLLKEHLKRLASIDLQILSAQVTESTDFTELTDQHPWLSSTRLVVKPDMLFG 64

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK             V +   +  V   ++  LG   +  + G   + +    VE   
Sbjct: 65  KRGKSGL----------VALNLDIAQVAEFVKARLG---VEVEMGGCKAPITTFIVEPFV 111

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
              +E YLS++ +R    ++F  S  GG++IEE       K+  + +     +T E  A 
Sbjct: 112 PHDQEFYLSIVSERHGSTISF--SECGGIEIEENW----DKVKTIFLPTEKPLTPEACAP 165

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           L  +L L+   R   GD    ++  F D D S LE+NP  ++ N +   LD +   DD A
Sbjct: 166 LIAILPLE--IRGTIGDFIMGVFAVFKDLDFSFLEMNPFTLV-NEKPYPLDMRGELDDTA 222

Query: 233 LYRHLDIQ 240
            +++ +  
Sbjct: 223 AFKNFNKW 230


>gi|254457438|ref|ZP_05070866.1| CoA_binding Ligase_CoA Citrate_synt [Campylobacterales bacterium GD
           1]
 gi|207086230|gb|EDZ63514.1| CoA_binding Ligase_CoA Citrate_synt [Campylobacterales bacterium GD
           1]
          Length = 445

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 81/418 (19%), Positives = 145/418 (34%), Gaps = 51/418 (12%)

Query: 3   IHEYQAKALLRKY-NVPVAKG------VVISSVHAAESAIK---TLPGPLYVVKSQIHAG 52
           I EY AK++L K+ +            V++ +    + A K    L     V K  +  G
Sbjct: 6   IREYDAKSILAKHWDKYFPDFTYAYETVMVQNGSELKKASKDKAWLKDKALVAKPDMLFG 65

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGS----RVNCVYV 108
            RGK           G V +  +   +                  PTG      +    V
Sbjct: 66  KRGKNDLVLFRDAKPGDVSLAKATSWIDEKSSTEQSVYFSFDGETPTGEAKVDMLTQFIV 125

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
           E         E Y+S  V           S +GGM++EE   +   ++   + D    + 
Sbjct: 126 EPFTPHKQEEEYYISATVVGDYD--MLYMSAEGGMEVEEGWDEKVTEVAFAITDTEEEIA 183

Query: 167 SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
            +  A++   +      +    +     +KA+ + + + LEINP ++    ++ +LD   
Sbjct: 184 KKIKANIPADV--AKADKAAFAEFAIGFFKAYRELNFAYLEINPFVMQG-KKIELLDMVA 240

Query: 227 SFDDNALYRH---------LDIQELRDVSEEDSREIEAKQHNLSYIAL-----DGNIGCM 272
             DD A +                +   S E +   EA     + + L     +  I  M
Sbjct: 241 KLDDTAGFMMVEEWGDVEYPTAFGMEAKSPEVAAIEEADSKTGASLKLTLLKPEARIWTM 300

Query: 273 VNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVKGI 324
           V G G ++   D I    G    AN+ +  GG    +     + +        DS  +  
Sbjct: 301 VAGGGASVVYADTIADLAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDSKDREK 360

Query: 325 LINIFGGIMRCDVLV---KGILSAV-----KEVKINIPLVMRLEGANVDIGNRLIAES 374
           ++ I G I     +     GI+ A      K +++ I + +R  G N + G + I E+
Sbjct: 361 ILIIGGAIANFTDVAATFTGIIQAFENYAEKMLEVGIKIYVRRGGPNYEKGLKDIKEA 418


>gi|316973647|gb|EFV57211.1| ATP-citrate synthase [Trichinella spiralis]
          Length = 1157

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 87/429 (20%), Positives = 152/429 (35%), Gaps = 73/429 (17%)

Query: 3   IHEYQAKALLRKYN---------VPVAKGVVISSVHAAESAIKTLP-GPLYVVKSQIHAG 52
           I E+QAK ++  YN         +P+A   +  S  + E+    +      VVK      
Sbjct: 6   ITEFQAKTIV--YNNIDQCPLKILPIAHFDLRQSWDSFENVNHWIDQETRLVVKVDQLIK 63

Query: 53  GRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            RGK    E         +   S       I +I G              V    +E   
Sbjct: 64  RRGKLGLLEKDVTYLSAKKWIKSKSEKEIQIGKIHGY-------------VTNFVIEPYI 110

Query: 113 DILRE--LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
               E   Y+ +   R+  +V F    +GG+D+ +V +        L   P      E V
Sbjct: 111 SHKEEDECYVCIYSVRSGDVVLFY--HRGGIDVGDVDQKSENLFIPLEKTPSY---VEIV 165

Query: 171 ASLCDMLELQGQARID-GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISF 228
           + L   + L+   +     +    LY+ + +   + LEINPL++  + + + +LD     
Sbjct: 166 SKLL--INLKCNVKKQLVAEFIIKLYQLYVNLHFTYLEINPLLVNGDDKTIYMLDIAAKL 223

Query: 229 DDNALYR-HLDIQELRDVSEEDSREIEAKQH------------NLSYIALDGNIGCMVNG 275
           D  A +       E+   +    + +  +Q+             L+ +  DG I  MV G
Sbjct: 224 DSAADFMCRRQWGEIEFPTPFGRQLLPEEQYVAELDSRSGASLKLTVLNKDGRIWTMVAG 283

Query: 276 AGL---------AMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS----- 319
            G          + +  D I   G A   AN+ +  G   + +     K I         
Sbjct: 284 GGASFLFYLLCFSNSYSDTICDMGEASELANYGEYSGAPTEVQTYEYAKTILKLMTSTKV 343

Query: 320 SVKGILINIFGGIMRCDVLV---KGILSAVKEVKI-----NIPLVMRLEGANVDIGNRLI 371
              G ++ I G I     +    KGI+ A++E ++      + + +R  G N   G RL+
Sbjct: 344 HKSGKVLIIGGSIANFTNVADTFKGIILALEEYRLELIRHKVSIYVRRGGPNFQEGLRLM 403

Query: 372 AESGLNVIT 380
            E+G  +  
Sbjct: 404 KEAGKTLEI 412


>gi|324547113|gb|ADY49720.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Ascaris suum]
          Length = 118

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/107 (54%), Positives = 81/107 (75%)

Query: 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLV 339
           MATMDIIKL+GG PANFLDVGG   ++ V AAFKIITSD  VK IL+NIFGGI+ C V+ 
Sbjct: 1   MATMDIIKLHGGRPANFLDVGGTVSEEAVCAAFKIITSDPQVKAILVNIFGGIVSCLVIA 60

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
            G+++A K++++ +PL++RLEG        ++  SGL +ITA+++D+
Sbjct: 61  NGLVAACKKIELKVPLIIRLEGTKAVEAREVLKASGLPLITAVNMDE 107


>gi|294945953|ref|XP_002784891.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
 gi|239898169|gb|EER16687.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
          Length = 116

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/115 (47%), Positives = 82/115 (71%), Gaps = 1/115 (0%)

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGI 342
           MD++ + GG+PANFLD+GG    ++V  A  II SDS+VK +LINIFGGI++CDV+ +GI
Sbjct: 1   MDLLSVKGGSPANFLDIGGSVGVEEVKTALGIINSDSNVKSVLINIFGGIVKCDVVAEGI 60

Query: 343 LSAVKEVKIN-IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           + A +E+ I+  P+V+RL G NV+ G  ++A++GL+     DL++AA K V   K
Sbjct: 61  VRAAQELSIDHKPIVVRLVGTNVERGKSILAQAGLDYYAIDDLNEAAIKAVELSK 115


>gi|328767640|gb|EGF77689.1| hypothetical protein BATDEDRAFT_35901 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1206

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 80/425 (18%), Positives = 140/425 (32%), Gaps = 85/425 (20%)

Query: 16  NVPVAKGVVISSVH--------AAESAIKT-----LPGPLYVVKSQIHAGGRGKGRFKEL 62
            +P    VV +           A   A ++     L G   V K       RGK     +
Sbjct: 76  GIP-PASVVAAQAQKMFDTHMAAVFQAAESKHPWLLSGCRLVCKPDQLVKRRGKNGLLGI 134

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYL 120
             D             V + I    G  +   ++      ++   VE         E Y+
Sbjct: 135 NLDWNA----------VKAWISARAGKKIKIDRSTG---YLHTFLVEPFCPHPQDSEFYI 181

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +   R    + F  + +GG+D+ +V     + +  + +   I  T + VA+L    ++ 
Sbjct: 182 CIQSVRDGDQIFF--THEGGVDVGDVDAKARKML--IPVGSTIPTTKDVVAALLS--DIP 235

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLII-----MKNGRLRVLDSKISFDDNALY- 234
                        LY  + D   + LEINPL++         ++  LD     D  A + 
Sbjct: 236 ASKVDTLVHFISRLYAVYVDLQFTYLEINPLVVLDPVGSAPAQIFYLDLAAKLDQTADFE 295

Query: 235 ------------------------RHLDIQELRDVSEEDSREIEAKQHNLSYIALD---- 266
                                           R++++E+S   +      + + L     
Sbjct: 296 CGKKWSDGLRIAYASDPSSLLGPAIQFPAPFGRELTKEESYIADLDAKTGASLKLTVMNA 355

Query: 267 -GNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS---- 319
            G I  MV G G ++   D I  +G A   AN+ +  G   + +     K I        
Sbjct: 356 SGRIWTMVAGGGASVVYSDAIAAHGFAHELANYGEYSGAPSESQTYEYAKTILDLMTRGA 415

Query: 320 -SVKGILINIFGGIMRCDVLV---KGILSAVKEVKIN-----IPLVMRLEGANVDIGNRL 370
              +G  + I GGI     +    KGI+ A++E +       + + +R  G N   G RL
Sbjct: 416 PHPEGKFLFIGGGIANFTNVAATFKGIIRALREFQQRLQNHAVKIYVRRAGPNFQEGLRL 475

Query: 371 IAESG 375
           +   G
Sbjct: 476 MRTVG 480


>gi|186470804|ref|YP_001862122.1| ATP-grasp domain-containing protein [Burkholderia phymatum STM815]
 gi|184197113|gb|ACC75076.1| ATP-grasp domain protein [Burkholderia phymatum STM815]
          Length = 432

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/316 (21%), Positives = 116/316 (36%), Gaps = 26/316 (8%)

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
            + + + E           G   ++ N V  E G     E+Y S+             S 
Sbjct: 67  DLKTALAEKERLYFAEHVVGHVRAKANGVTFEAGVPAKHEVYFSITDSTRFRAPTMTLSH 126

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA 197
            GGMDIEEV    PQ +  +  D L G+ +  VA+    +    +         P L++ 
Sbjct: 127 MGGMDIEEVD---PQHVAMVPFDALTGLKAFVVANALSEIGAPREIISPLVQQLPKLWEL 183

Query: 198 FCDKDMSLLEINPLIIMKNGR----LRVLDSKISFD-DNALY------RHLDIQELRDVS 246
           F D  M+ LE+NP+ + ++ +        D K  FD D+  +       HL   +  D  
Sbjct: 184 FHDFGMTTLELNPIRMREDKKGRLTPVACDFKCGFDRDDPRFSRLGLPPHLFAADYSDFE 243

Query: 247 EE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ 305
           +E +       Q ++  I   G I     G G   A   + ++ G A     D GG    
Sbjct: 244 QEINQLRTHQGQSDVYVINERGTILAPTFGGG---ANSLVTEMLGDAAIISSDFGGNPPY 300

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV---KINIPLVMRL 359
           +K+    +I       +  ++ I GG      + +    +  A++E        PL + L
Sbjct: 301 EKMKEVARICFRHWLKQSNVLFIIGGKSNNTDIYETLRAMADALREHFSEHGPTPLYVVL 360

Query: 360 --EGANVDIGNRLIAE 373
              G N+  G   + +
Sbjct: 361 GRGGPNLVRGMSALRD 376


>gi|261190616|ref|XP_002621717.1| ATP-citrate-lyase [Ajellomyces dermatitidis SLH14081]
 gi|239591140|gb|EEQ73721.1| ATP-citrate-lyase [Ajellomyces dermatitidis SLH14081]
          Length = 471

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 132/395 (33%), Gaps = 66/395 (16%)

Query: 29  HAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDARLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A+L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLK-NYPSNDEIAATLLSKI--PQGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNG-----RLRVLDSKISFDDNALY---------------------RHLD 238
            LEINPL+++ N      ++  LD     D  A +                     R  +
Sbjct: 220 YLEINPLVVIPNDTKTSAQVHFLDLAAKLDQTAEFECGTKWAVARSPAALGTPNAPRQTE 279

Query: 239 IQELRDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP-- 293
               R   E+   +++AK      L+ +  +G I  +V G G ++   D I   G     
Sbjct: 280 SNHRRRKEEKFIADMDAKTGASLKLTVLNANGRIWTLVAGGGASVVYADAIASAGFVADL 339

Query: 294 ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMRCDVLV---KGILSA 345
           AN+ +  G   + +     + +      +    +G ++ I GGI     +    KG++ A
Sbjct: 340 ANYGEYSGAPTETQTFNYARTVLDLMLRAPMHPQGKVLFIGGGIANFTNVASTFKGVIRA 399

Query: 346 VKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
           ++EV     +  + + +R  G N   G + I   G
Sbjct: 400 LREVASILLEHKVQIWVRRAGPNYQEGLKNIKAVG 434


>gi|219118523|ref|XP_002180032.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408289|gb|EEC48223.1| atp-citrate synthase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1082

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 77/413 (18%), Positives = 146/413 (35%), Gaps = 58/413 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKG--------VVISSVHAAESA---IKTLPGPLYVVKSQIHA 51
           + E+  K L+ ++   V++G        V+I++    E+       L   L VVK     
Sbjct: 6   VREFHGKKLIARHVHEVSEGKHSIDDRSVLITTETDLETLPISETWLSDTLLVVKPDQLI 65

Query: 52  GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
             RGK     +  + +G          V   +   +   +   Q       ++   VE  
Sbjct: 66  KRRGKAGLVGIKLNWQG----------VQEWVNARMQKEI---QIEHATGTLDHFIVEPF 112

Query: 112 ADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
               +  E Y+ +  DR    + F    +GG+D+ +V  D   K   + ID    +T + 
Sbjct: 113 VPHEQSDEYYICIQSDREGEEILF--CAEGGVDVGDV--DTKAKRLHVAIDDDY-LTPDR 167

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +     +  +    +         L+  +   +   +EINP++    G +  LD     D
Sbjct: 168 ILEADLLEGVPADRQDSLASFVLTLFTVYRKLNFVYMEINPIVYTAEGTIVPLDLAAKID 227

Query: 230 DNALYRH-LDIQEL---------RDVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGA 276
           + A + +  D   L             E   R+++AK      L+ +   G +  MV G 
Sbjct: 228 ETAAFLNAPDWGHLDFPAPFGRKEFPEEAYIRDLDAKTGASLKLTILNHAGRVWTMVAGG 287

Query: 277 GLAMATMDIIKL--YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG-------ILIN 327
           G ++   D I    +G   AN+ +  G    +      K + S  + +        I+  
Sbjct: 288 GASVVYADTISDLGFGHELANYGEYSGAPSTEHTFEYAKTLISLMTREKDPRGKIFIIGG 347

Query: 328 IFGGIMRCDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
                        G++ A+K  +      +I + +R  G N   G RL+ + G
Sbjct: 348 GIANFTDVAATFTGLIKAIKAFQEILKAHHIKIWVRRAGPNYQEGLRLMRDCG 400


>gi|312370903|gb|EFR19206.1| hypothetical protein AND_22915 [Anopheles darlingi]
          Length = 891

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 34/272 (12%)

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             +   QGG+DI +V      K  KL +     V+  D+  +  + E+ G  +    +  
Sbjct: 56  TILFYHQGGVDIGDVD----SKALKLDVPVGQDVSLADIEKVL-LTEISGAKKQRIANFV 110

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALY-RHLDIQEL-------R 243
            NLY+ + D   + LEINPL++  +  + +LD     D  A +       ++       R
Sbjct: 111 YNLYRMYVDMYFTYLEINPLVVTND-SIYILDLAAKLDATADFICRPKWGDIDYPPPFGR 169

Query: 244 DVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANF 296
           D   E++   +          L+ +  +G I  MV G G ++   D I   GGA   AN+
Sbjct: 170 DAFPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGATELANY 229

Query: 297 LDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMRCDVLV---KGILSAVKE 348
            +  G   + +     K I      S     G ++   GGI     +     GI++A++E
Sbjct: 230 GEYSGAPSEQQTYEYAKTILSLMTSSPKHPDGKVLITGGGIANFTNVAATFSGIITALRE 289

Query: 349 -----VKINIPLVMRLEGANVDIGNRLIAESG 375
                +   + + +R  G N   G R + E G
Sbjct: 290 YQQKLIDHKVSIFVRRAGPNYQEGLRKMREIG 321


>gi|331220513|ref|XP_003322932.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301922|gb|EFP78513.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1145

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 75/393 (19%), Positives = 129/393 (32%), Gaps = 73/393 (18%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            +     VVK       RGK     L            +     + I+E  G  +  +  
Sbjct: 63  WVFSEKLVVKPDQLIKRRGKAGLLGLNK----------TWPEAKAWIQERAGKPVNVEGV 112

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
                 +N   VE  A      E Y+ +   R   M+ F  + +GG+DI +V      K 
Sbjct: 113 VG---TLNTFIVEPFAPHPSDTEYYVCINSVREGDMILF--THEGGVDIGDVDA----KA 163

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            K+ +     +          +  +    +    D    LY  + D   + LEINPL+ M
Sbjct: 164 AKITVPVDGDLPDRAQLKAGLLAAVPSHRQDALVDFLVRLYSTYVDLHYTYLEINPLVCM 223

Query: 215 KNGR----LRVLDSKISFDDNALYRHLDIQEL---------------------------- 242
           +       +  LD     D  A Y       +                            
Sbjct: 224 EAADGSPSIAFLDMAAKLDQTADYLCGAKWAIGRETSGAVNGTKTFADRGPPMVFPAPFG 283

Query: 243 RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--AN 295
           RD+++E++   +          L+ +   G +  MV G G ++   D I  +G A   AN
Sbjct: 284 RDLTKEEAYIQKLDASTGASLKLTVLNAHGRVWTMVAGGGASVVYSDAIAAHGFAHELAN 343

Query: 296 FLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLVK---GILSAVK 347
           + +  G   + +     K I       +   +G ++ I GGI     +     GI+ A+K
Sbjct: 344 YGEYSGAPTKSQTFEYAKTILDLMTRGEPHPEGKVLIIGGGIANFTNVAATFGGIIDALK 403

Query: 348 EVK-----INIPLVMRLEGANVDIGNRLIAESG 375
             K       + + +R  G N   G + +   G
Sbjct: 404 NYKEGLQRHKVKIFVRRGGPNYQEGLKKMRLIG 436


>gi|331220505|ref|XP_003322928.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301918|gb|EFP78509.1| ATP-citrate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1086

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 75/393 (19%), Positives = 129/393 (32%), Gaps = 73/393 (18%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            +     VVK       RGK     L            +     + I+E  G  +  +  
Sbjct: 63  WVFSEKLVVKPDQLIKRRGKAGLLGLNK----------TWPEAKAWIQERAGKPVNVEGV 112

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
                 +N   VE  A      E Y+ +   R   M+ F  + +GG+DI +V      K 
Sbjct: 113 VG---TLNTFIVEPFAPHPSDTEYYVCINSVREGDMILF--THEGGVDIGDVDA----KA 163

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            K+ +     +          +  +    +    D    LY  + D   + LEINPL+ M
Sbjct: 164 AKITVPVDGDLPDRAQLKAGLLAAVPSHRQDALVDFLVRLYSTYVDLHYTYLEINPLVCM 223

Query: 215 KNGR----LRVLDSKISFDDNALYRHLDIQEL---------------------------- 242
           +       +  LD     D  A Y       +                            
Sbjct: 224 EAADGSPSIAFLDMAAKLDQTADYLCGAKWAIGRETSGAVNGTKTFADRGPPMVFPAPFG 283

Query: 243 RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--AN 295
           RD+++E++   +          L+ +   G +  MV G G ++   D I  +G A   AN
Sbjct: 284 RDLTKEEAYIQKLDASTGASLKLTVLNAHGRVWTMVAGGGASVVYSDAIAAHGFAHELAN 343

Query: 296 FLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLVK---GILSAVK 347
           + +  G   + +     K I       +   +G ++ I GGI     +     GI+ A+K
Sbjct: 344 YGEYSGAPTKSQTFEYAKTILDLMTRGEPHPEGKVLIIGGGIANFTNVAATFGGIIDALK 403

Query: 348 EVK-----INIPLVMRLEGANVDIGNRLIAESG 375
             K       + + +R  G N   G + +   G
Sbjct: 404 NYKEGLQRHRVKIFVRRGGPNYQEGLKKMRLIG 436


>gi|257485470|ref|ZP_05639511.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 99

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/98 (56%), Positives = 79/98 (80%)

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA +++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RL
Sbjct: 1   GGGATKERVTEAFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRL 60

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           EG N ++G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 61  EGNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 98


>gi|50551515|ref|XP_503231.1| YALI0D24431p [Yarrowia lipolytica]
 gi|49649099|emb|CAG81432.1| YALI0D24431p [Yarrowia lipolytica]
          Length = 497

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 83/461 (18%), Positives = 145/461 (31%), Gaps = 104/461 (22%)

Query: 2   NIHEYQAKALLRKY--NVPV-AKGVVISS------------------VHAAESAIKTL-- 38
           +IHE   KALL  +    PV A+   I++                       +A +    
Sbjct: 5   SIHEADGKALLAHFLSKAPVWAEQQPINTFEMGTPKLASLTFEDGVAPEQIFAAAEKTYP 64

Query: 39  ----PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITK 94
                G  +V K       RGK     L            S +     I E     +  +
Sbjct: 65  WLLESGAKFVAKPDQLIKRRGKAGLLVLNK----------SWEECKPWIAERAAKPINVE 114

Query: 95  QTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ 152
                   +    VE      +  E Y+++   R    + F    +GG+D+ +V     +
Sbjct: 115 GIDG---VLRTFLVEPFVPHDQKHEYYINIHSVREGDWILFY--HEGGVDVGDVDAKAAK 169

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI 212
            +  + +D      S    +   +  +         D    LY  + D   + LEINPL+
Sbjct: 170 IL--IPVDIENEYPSNATLTKELLAHVPEDQHQTLLDFINRLYAVYVDLQFTYLEINPLV 227

Query: 213 IMKNGR---LRVLDSKISFDDNALYRH-LDIQELRDV----------------------- 245
           ++   +   +  LD     D  A +         R                         
Sbjct: 228 VIPTAQGVEVHYLDLAGKLDQTAEFECGPKWAAARSPAALGQVVTIDAGSTKVSIDAGPA 287

Query: 246 -----------SEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
                      S+E++   E          L+ +   G I  +V G G ++   D I   
Sbjct: 288 MVFPAPFGRELSKEEAYIAELDSKTGASLKLTVLNAKGRIWTLVAGGGASVVYADAIASA 347

Query: 290 G--GAPANFLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVL---V 339
           G     AN+ +  G  ++ +     K +       D+  +G ++ I GGI     +    
Sbjct: 348 GFADELANYGEYSGAPNETQTYEYAKTVLDLMTRGDAHPEGKVLFIGGGIANFTQVGSTF 407

Query: 340 KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
           KGI+ A ++         + + +R  G N   G RLI  +G
Sbjct: 408 KGIIRAFRDYQSSLHNHKVKIYVRRGGPNWQEGLRLIKSAG 448


>gi|328849140|gb|EGF98326.1| hypothetical protein MELLADRAFT_46071 [Melampsora larici-populina
           98AG31]
          Length = 1145

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 89/455 (19%), Positives = 149/455 (32%), Gaps = 103/455 (22%)

Query: 3   IHEYQAKAL----LR---KYNV--PVAKG------VVIS----------SVHAAESAIKT 37
           I EY AK L    L    ++    PV K        V            +  A   A   
Sbjct: 6   IREYDAKLLVGYWLARAPQFGAACPVPKSFKSPEVKVAQISWDSATNTITPDANLPA--W 63

Query: 38  LPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTG 97
           +     VVK       RGK     L            +     + I E  G  +  +   
Sbjct: 64  VFTEKLVVKPDQLIKRRGKAGLLGLNK----------TWNEAKAWIIEKAGKPVNVEGVV 113

Query: 98  PTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF 155
                ++   VE  A      E Y+ +   R   M+ F  + +GG+DI +V      K  
Sbjct: 114 G---TLSNFIVEPFAPHPSDTEYYVCINSVREGDMILF--THEGGVDIGDVDA----KAA 164

Query: 156 KLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           K+ +     + + D      +  +    +    D    LY A+ D   + LEINPL+ M+
Sbjct: 165 KITVPVDGDLPTRDELKSGLLAAVPPHRQDALVDFLARLYSAYVDLHYTYLEINPLVCME 224

Query: 216 NGR----LRVLDSKISFDDNALYRHLDIQEL----------------------------- 242
                  +  LD     D  A Y       +                             
Sbjct: 225 AADGSPSIAFLDMAAKLDQTADYLCGAKWAIARDTSGPVTDAGGAKVFADRGPPMVFPAP 284

Query: 243 --RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP-- 293
             RD+++E++   +          L+ +  +G +  MV G G ++   D I  +G A   
Sbjct: 285 FGRDLTKEEAYIQKLDASTGASLKLTVLNAEGRVWTMVAGGGASVVYSDAIAAHGFAHEL 344

Query: 294 ANFLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLV---KGILSA 345
           AN+ +  G   +++     K I       +   +G ++ I GGI     +     GI+ A
Sbjct: 345 ANYGEYSGAPTKNQTFEYAKTILDLMTRGEPHPEGKVLIIGGGIANFTNVAATFAGIIDA 404

Query: 346 VKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
           +K  K       + + +R  G N   G + +   G
Sbjct: 405 LKNFKEGLHRHKVRIFVRRGGPNYQDGLKKMRLIG 439


>gi|322698614|gb|EFY90383.1| ATP citrate lyase [Metarhizium acridum CQMa 102]
          Length = 489

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 77/417 (18%), Positives = 142/417 (34%), Gaps = 86/417 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  P   +V K       RGK     L            +     + + E 
Sbjct: 58  DQAEATFPWLLLPNAKFVAKPDQLIKRRGKSGLLALNK----------TWPEARAWVAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     + T      +    VE         E Y+++  +R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVEHTTG---VLRQFLVEPFVPHPQDTEYYININSERDGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
            V +   + +  + +D     ++E++A      E+         D    LY  + D   +
Sbjct: 163 NVDEKAKKLL--IPVDLAEFPSNEEIAESLLK-EVPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNEDKTSAVVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNVAPANG 279

Query: 243 ------------------RDVSEEDSREIEAKQH-----NLSYIALDGNIGCMVNGAGLA 279
                             R++++E++   E          L+ +  +G I  +V G G +
Sbjct: 280 EKVNIDAGPPIEFPAPFGRELTKEEAYIAEMDAKTGASLKLTVLNPNGRIWTLVAGGGAS 339

Query: 280 MATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITSDSSV-----KGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +           KG ++ I GGI
Sbjct: 340 VVYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPISDKGKVLFIGGGI 399

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
                +    KG++ A+++      + N+ + +R  G N   G + +     E GLN
Sbjct: 400 ANFTNVASTFKGVIRALRDYATQLTEHNVQIWVRRAGPNYQEGLKNMKAATQELGLN 456


>gi|154277250|ref|XP_001539466.1| hypothetical protein HCAG_04933 [Ajellomyces capsulatus NAm1]
 gi|150413051|gb|EDN08434.1| hypothetical protein HCAG_04933 [Ajellomyces capsulatus NAm1]
          Length = 486

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 74/411 (18%), Positives = 132/411 (32%), Gaps = 83/411 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLANDVRLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILRE--LYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE      +E   Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHSQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           +V     + +  + +D        E  A+L   +           D    LY  + D   
Sbjct: 163 DVDAKAEKLL--IPVDLKNYPSNDEIAATLLSKI--PQGLHNVLVDFITRLYAVYVDCQF 218

Query: 204 SLLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL---------------- 242
           + LEINPL+++ N       +  LD     D  A +       +                
Sbjct: 219 TYLEINPLVVIPNATKTSAAVHFLDLAAKLDQTAEFECGTKWAMARSPAALGTPNAPRTD 278

Query: 243 ------------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLA 279
                             R++S+E+    +      + + L     +G I  +V G G +
Sbjct: 279 GKVTIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNANGRIWTLVAGGGAS 338

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + I      +    +G ++ I GGI
Sbjct: 339 VVYADAIASAGFVADLANYGEYSGAPTETQTFNYARTILDLMLRAPMHPQGKVLFIGGGI 398

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                +    KG++ A++E     V+  + + +R  G N   G + I   G
Sbjct: 399 ANFTNVASTFKGVIRALREVASILVEHKVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|325096707|gb|EGC50017.1| ATP-citrate lyase [Ajellomyces capsulatus H88]
          Length = 486

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 74/411 (18%), Positives = 131/411 (31%), Gaps = 83/411 (20%)

Query: 29  HAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDVRLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           +V     + +  + +D        E  A+L   +           D    LY  + D   
Sbjct: 163 DVDAKAEKLL--IPVDLKNYPSNDEIAATLLSKI--PQGLHNVLVDFITRLYAVYVDCQF 218

Query: 204 SLLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL---------------- 242
           + LEINPL+++ N       +  LD     D  A +       +                
Sbjct: 219 TYLEINPLVVIPNATKTSAAVHFLDLAAKLDQTAEFECGTKWAMARSPAALGTPNAPRTD 278

Query: 243 ------------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLA 279
                             R++S+E+    +      + + L     +G I  +V G G +
Sbjct: 279 GKVTIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNANGRIWTLVAGGGAS 338

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + I      +    +G ++ I GGI
Sbjct: 339 VVYADAIASAGFVADLANYGEYSGAPTETQTFNYARTILDLMLRAPMHPQGKVLFIGGGI 398

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                +    KG++ A++E     V+  + + +R  G N   G + I   G
Sbjct: 399 ANFTNVASTFKGVIRALREVASILVEHKVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|225557291|gb|EEH05577.1| ATP-citrate-lyase [Ajellomyces capsulatus G186AR]
          Length = 486

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 74/411 (18%), Positives = 131/411 (31%), Gaps = 83/411 (20%)

Query: 29  HAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDVRLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
           +V     + +  + +D        E  A+L   +           D    LY  + D   
Sbjct: 163 DVDAKAEKLL--IPVDLKNYPSNDEIAATLLSKI--PQGLHNVLVDFITRLYAVYVDCQF 218

Query: 204 SLLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL---------------- 242
           + LEINPL+++ N       +  LD     D  A +       +                
Sbjct: 219 TYLEINPLVVIPNASKTSAAVHFLDLAAKLDQTAEFECGTKWAMARSPAALGTPNAPRTD 278

Query: 243 ------------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLA 279
                             R++S+E+    +      + + L     +G I  +V G G +
Sbjct: 279 GKVTIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNANGRIWTLVAGGGAS 338

Query: 280 MATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + I      +    +G ++ I GGI
Sbjct: 339 VVYADAIASAGFVADLANYGEYSGAPTETQTFNYARTILDLMLRAPMHPQGKVLFIGGGI 398

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
                +    KG++ A++E     V+  + + +R  G N   G + I   G
Sbjct: 399 ANFTNVASTFKGVIRALREVASILVEHKVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|322709755|gb|EFZ01330.1| ATP citrate lyase [Metarhizium anisopliae ARSEF 23]
          Length = 489

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 78/417 (18%), Positives = 143/417 (34%), Gaps = 86/417 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L   G  +V K       RGK     L            +     + I E 
Sbjct: 58  EQAEATYPWLLHDGARFVAKPDQLIKRRGKSGLLALNK----------TWPEAKAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     + T      +    VE         E Y+++  +R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVEHTTG---VLRQFLVEPFVPHPQDTEYYININSERRGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
            V +     +  + +D     ++E++A    + ++         D    LY  + D   +
Sbjct: 163 NVDEKAKSLL--IPVDLTEFPSNEEIAK-ALLEQVPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNEDKTSAVVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNVAPANG 279

Query: 243 ------------------RDVSEEDSREIEAKQH-----NLSYIALDGNIGCMVNGAGLA 279
                             R++++E++   E          L+ +   G I  +V G G +
Sbjct: 280 EKVNIDAGPPIEFPAPFGRELTKEEAYIAEMDAKTGASLKLTVLNPSGRIWTLVAGGGAS 339

Query: 280 MATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +      +  S KG ++ I GGI
Sbjct: 340 VVYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPMSDKGKVLFIGGGI 399

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
                +    KG++ A+++      + N+ + +R  G N   G + +     E GLN
Sbjct: 400 ANFTNVASTFKGVIRALRDYATQLNEHNVQIWVRRAGPNYQEGLKNMKAATQELGLN 456


>gi|301093042|ref|XP_002997370.1| ATP-citrate synthase [Phytophthora infestans T30-4]
 gi|262110768|gb|EEY68820.1| ATP-citrate synthase [Phytophthora infestans T30-4]
          Length = 1091

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 81/420 (19%), Positives = 144/420 (34%), Gaps = 82/420 (19%)

Query: 3   IHEYQAKALL----------RKY-NVPVAKGVVISSVHAAESAIKT-------LPGPLYV 44
           I E+  K +L          +++  V V+K            AI+T       L     V
Sbjct: 6   IREFDGKRILSTSLPAFNLNKRFAQVAVSKSFAGQGREDFFGAIETTSPWLTTLGETKLV 65

Query: 45  VKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
           VK       RGK     L A          +   V   + E +   +   Q       + 
Sbjct: 66  VKPDQLIKRRGKANLLLLNA----------TWAEVQDWVWERINKPV---QVETVTGVLT 112

Query: 105 CVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
              VE         E Y+ ++ +R    + F    +GG+D+ +V      K  +L +   
Sbjct: 113 HFIVEPFLKHGAADEHYVCIVSNRDGEEILF--HHEGGVDVGDVD----SKAKRLQVGIE 166

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
              + E+                        +   F +     +EINP++++ + ++ VL
Sbjct: 167 SVASEEE---------------PILAKFLVGMLAKFRELHFVYMEINPIVLVGD-QISVL 210

Query: 223 DSKISFDDNALYR----------HLDIQELRDVSEEDSREIEAKQH---NLSYIALDGNI 269
           D     D+ A +                  +   EE  +++++K      L+ +   G I
Sbjct: 211 DMAAKLDETANFLVGDRWGAIEFPPAFGRAKFPEEEFIQDLDSKTGASLKLTILNHTGRI 270

Query: 270 GCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQDKVAAAFKIIT----SDSSVKG 323
             MV G G ++   D I    YG   AN+ +  G   +       K I      +   +G
Sbjct: 271 WTMVAGGGASVVYADTIADLGYGHELANYGEYSGAPSETHTYHYAKTILDLMTRNFDERG 330

Query: 324 ILINIFGGIMRCDVLV---KGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESG 375
            ++ I GGI     +    KGI+ A+KE +       + + +R  G N   G  ++ E G
Sbjct: 331 KVLIIGGGIANFTDVALTFKGIIRAIKEYQQKLKDNKVHIWVRRGGPNCQEGLTIMREVG 390


>gi|302498023|ref|XP_003011010.1| hypothetical protein ARB_02742 [Arthroderma benhamiae CBS 112371]
 gi|291174557|gb|EFE30370.1| hypothetical protein ARB_02742 [Arthroderma benhamiae CBS 112371]
          Length = 627

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 136/415 (32%), Gaps = 82/415 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 199 DQAEATYPWLLAPGARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 248

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 249 AGKE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 303

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 304 DVDAKAEKLLVPVNLK-QYPSNEEIAAGLLSKI--PKGLHNVLVDFITRLYAVYVDCQFT 360

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 361 YLEINPLVVIPNEDKTSASVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLAATTASTS 420

Query: 243 ------------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
                             R++S+E+    +++AK      L+ +  +G I  +V G G +
Sbjct: 421 SKVTIDAGPPMDFPAPFGREMSKEEKYISDMDAKTGASLKLTVLNANGRIWTLVAGGGAS 480

Query: 280 MATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +           +G ++ I GGI
Sbjct: 481 VVYADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGI 540

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                +    KG++ A++E     V+    + +R  G N   G + I   G  + 
Sbjct: 541 ANFTNVATTFKGVIRALREVAPVLVEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 595


>gi|52545516|emb|CAB43323.2| hypothetical protein [Homo sapiens]
          Length = 192

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 61/123 (49%)

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
                 V    ++++G  L TKQT   G +VN V V +  DI RE YL++L+DR+     
Sbjct: 1   TKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPV 60

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            + S QGG+DIEEVA   P+ IFK  ID   G+       + + L   G  +     +  
Sbjct: 61  LVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQVEAILV 120

Query: 193 NLY 195
           N++
Sbjct: 121 NIF 123



 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/68 (47%), Positives = 49/68 (72%)

Query: 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           S V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL +
Sbjct: 113 SQVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 172

Query: 379 ITAIDLDD 386
            +AIDL+D
Sbjct: 173 TSAIDLED 180


>gi|320039168|gb|EFW21103.1| ATP-citrate-lyase [Coccidioides posadasii str. Silveira]
          Length = 486

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 130/414 (31%), Gaps = 81/414 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L   G  +V K       RGK     L            S +     I   
Sbjct: 58  DQAESTYPWLLAKGAKFVAKPDQLIKRRGKSGLLALNK----------SWEEAREWIAAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKP---QQVETVTGVLRHFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLKNFPS-NDEIAAKLLSKI--PRGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQELR------- 243
            LEINPL+++ N       +  LD     D  A +         R      +R       
Sbjct: 220 YLEINPLVVIPNADKTSAEVHFLDLAAKLDQTAEFECGTKWAVARSPAALGIRAPLKNDD 279

Query: 244 --------------------DVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                                  E+   +++AK      L+ +   G I  +V G G ++
Sbjct: 280 KVTIDAGPPMDFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNSTGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNVI 379
               +    KG++ A++EV     +    + +R  G N   G + I   G  + 
Sbjct: 400 NFTNVATTFKGVIRALREVAPVLNEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 453


>gi|323448894|gb|EGB04787.1| hypothetical protein AURANDRAFT_72443 [Aureococcus anophagefferens]
          Length = 1127

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 80/440 (18%), Positives = 144/440 (32%), Gaps = 76/440 (17%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLY----- 43
           + EY  K LL KY               + V  G   S   +  S    L    +     
Sbjct: 6   VREYFGKQLLAKYLGEASGGEFEFEGRGMLVKSG--ASDPASPSSWAALLAAHPWARDAR 63

Query: 44  -VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR 102
            V K       RGK             + ++ S     + +   + +T+     G  G  
Sbjct: 64  LVAKPDQLIKRRGKAGL----------LAIDKSFDECRAWVDARMNATI--DVEGVEG-V 110

Query: 103 VNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
           ++   VE      +  E Y+ ++ +R    + F            V         K L  
Sbjct: 111 LHTFLVEPFVPHAQADEYYVCVVSNREGEELLF-------CKDGGVDVGDVDAKAKRLQV 163

Query: 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
           PL    + D  +   +  +    +         L   +       +EINP++  + G++ 
Sbjct: 164 PLGESAAPDALAAALLDGVPEARKPKLARFLATLLGVYRQLHFVYMEINPIVFEEGGKIT 223

Query: 221 VLDSKISFDDNALYR-HLDIQELRD----------VSEEDSREIEAKQH---NLSYIALD 266
            LD     D+ A +          D            E   R ++AK      L+ + + 
Sbjct: 224 PLDLAAKLDETAAFLVQNKWGPGVDFPAPFGRAEFPEEAYIRSMDAKTGASLKLTILNVA 283

Query: 267 GNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT----SDSS 320
           G +  MV G G ++   D I   G A   AN+ +  G  + ++     + I         
Sbjct: 284 GRVWTMVAGGGASVVYADTICDLGFAHELANYGEYSGAPNDEQTYNYARTILGLMTRTRR 343

Query: 321 VKGILINIFGGIMRCDVLV---KGILSAVKEVKIN-----IPLVMRLEGANVDIGNRLI- 371
             G ++ + GGI     +    +G++ A++  K       + + +R  G N   G R++ 
Sbjct: 344 DDGKVLIVGGGIANFTDVAATFRGLIKALRAFKDELKAGGVKIYVRRAGPNYQEGLRMML 403

Query: 372 ---AESGLNVITAIDLDDAA 388
               E+GL+V       DA 
Sbjct: 404 RLRDETGLHVRVFGPEQDAV 423


>gi|303318313|ref|XP_003069156.1| ATP-citrate-lyase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240108842|gb|EER27011.1| ATP-citrate-lyase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 486

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 130/414 (31%), Gaps = 81/414 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L   G  +V K       RGK     L            S +     I   
Sbjct: 58  DQAESTYPWLLAKGAKFVAKPDQLIKRRGKSGLLALNK----------SWEEAREWIAAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKP---QQVETVTGVLRHFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLKNFPS-NDEIAAKLLSKI--PQGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQELR------- 243
            LEINPL+++ N       +  LD     D  A +         R      +R       
Sbjct: 220 YLEINPLVVIPNADKTSAEVHFLDLAAKLDQTAEFECGTKWAVARSPAALGIRAPLKNDD 279

Query: 244 --------------------DVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                                  E+   +++AK      L+ +   G I  +V G G ++
Sbjct: 280 KVTIDAGPPMDFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNSTGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNVI 379
               +    KG++ A++EV     +    + +R  G N   G + I   G  + 
Sbjct: 400 NFTNVATTFKGVIRALREVAPVLNEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 453


>gi|269148458|gb|ACZ28601.1| ATP-grasp domain-containing protein [uncultured organism]
          Length = 432

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 131/355 (36%), Gaps = 37/355 (10%)

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +     L + I++   +  +       G + ++   V  E G     E+Y+S+       
Sbjct: 62  IGFAKDLDTAIAEKERLYFAK---HSHGNSVAKSEGVTFESGIPAEYEIYVSITDSTIYR 118

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                 +  GG+DIEE+ +    KI  +  DPL G+    +++    L    +       
Sbjct: 119 APTLTITHHGGVDIEELPE---DKIATVPFDPLTGLKGFVISNTLRQLGAPNEIISPLVQ 175

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGR----LRVLDSKISFD-DNALYRHLDIQELRD 244
             P L+  + +  M++LE+NP+ +M N +        D K SFD D+  ++ L +    D
Sbjct: 176 NLPKLWDLYHNYGMNMLELNPIRMMPNAKGRLVPVACDFKCSFDTDDPNWKRLKLPASLD 235

Query: 245 VSEEDSREIEAK-------QHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
             E  + E+E         Q ++      G I  M  G G      +++   G   ++F 
Sbjct: 236 SGELCAYELEVNQLRTYQGQSDVFVTNDKGTITAMTFGGGANALVTELLGDAGIVSSDFG 295

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGILSAVKEVKIN-- 352
                A ++ V      +      +  ++ I GG      +    + +  A+++      
Sbjct: 296 --RQPAVREDVRNQPHYLFKHWLAQSNVLFIIGGKANNTDIYETFRAMADALRDHLNETG 353

Query: 353 -IPLVMRL--EGANVDIGNRLIAES--GLNV----ITAIDLDDAAQKIVHAVKGV 398
             PL + +   G N+  G   + ++  G+ +            A    V+  K V
Sbjct: 354 LKPLYVVIGRGGPNLIRGMGYMKDALDGMKIPYKMFGFDSSMSAV---VNYAKDV 405


>gi|119175816|ref|XP_001240070.1| ATP-citrate-lyase [Coccidioides immitis RS]
          Length = 486

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 75/414 (18%), Positives = 130/414 (31%), Gaps = 81/414 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L   G  +V K       RGK     L            + +     I   
Sbjct: 58  DQAESTYPWLLAKGAKFVAKPDQLIKRRGKSGLLALNK----------TWEEAREWIAAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKP---QQVETVTGVLRHFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLKNFPS-NDEIAAKLLSKI--PQGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQELR------- 243
            LEINPL+++ N       +  LD     D  A +         R      +R       
Sbjct: 220 YLEINPLVVIPNADKTSAEVHFLDLAAKLDQTAEFECGTKWAVARSPAALGIRAPLKNDD 279

Query: 244 --------------------DVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                                  E+   +++AK      L+ +   G I  +V G G ++
Sbjct: 280 KVTIDAGPPMDFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNSTGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNVI 379
               +    KG++ A++EV     +    + +R  G N   G + I   G  + 
Sbjct: 400 NFTNVATTFKGVIRALREVAPVLNEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 453


>gi|310795721|gb|EFQ31182.1| hypothetical protein GLRG_06326 [Glomerella graminicola M1.001]
          Length = 489

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 71/406 (17%), Positives = 137/406 (33%), Gaps = 86/406 (21%)

Query: 39  PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP 98
           PG  +V K       RGK     L            +     + I E  G  +  +    
Sbjct: 70  PGVKFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAERAGKEVKVETVNG 119

Query: 99  TGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK 156
               +    VE         E Y++++  R    + F  + +GG+D+ +V     + +  
Sbjct: 120 ---VLRQFLVEPFVPHPQDTEYYINIMSVRDGDWILF--THEGGVDVGDVDAKAEKLL-- 172

Query: 157 LLIDPLIGVT-SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           + +D     +  E  A+L     +         D    LY  + +   + LEINPL+++ 
Sbjct: 173 IPVDLSQYPSNDEIAATLLKK--VPKGVHNVLVDFISRLYAVYVECQFTYLEINPLVVIP 230

Query: 216 NGR-----LRVLDSKISFDDNALY---------RHLDIQEL------------------- 242
           N       +  LD     D  A +         R      L                   
Sbjct: 231 NEDATSASVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNVASSNGEKVNIDAGPPM 290

Query: 243 -------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
                  R++++E++   +          L+ +  +G I  +V G G ++   D I   G
Sbjct: 291 EFPAPFGRELTKEEAYIADLDAKTGASLKLTVLNPNGRIWTLVAGGGASVVYADAIASAG 350

Query: 291 --GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMRCDVLV---K 340
                AN+ +  G   + +     + +      +  +  G ++ I GGI     +    K
Sbjct: 351 FADELANYGEYSGAPTESQTYHYARTVLDLMLRAPMNDAGKVLFIGGGIANFTNVASTFK 410

Query: 341 GILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
           G++ A+++      +  + + +R  G N   G + +     E GLN
Sbjct: 411 GVIRALRDYASQLNEHKVQIWVRRAGPNYQEGLKNMKAATQELGLN 456


>gi|119471599|ref|XP_001258191.1| ATP citrate lyase subunit (Acl), putatibe [Neosartorya fischeri
           NRRL 181]
 gi|119406343|gb|EAW16294.1| ATP citrate lyase subunit (Acl), putatibe [Neosartorya fischeri
           NRRL 181]
          Length = 486

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 75/410 (18%), Positives = 135/410 (32%), Gaps = 81/410 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
              E     L  PG  +V K       RGK     L            +       I   
Sbjct: 58  DQTEVVYPWLLTPGAKFVAKPDQLIKRRGKSGLLALNK----------TWPEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G  +  +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEIKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++       E  A+L     +         D    LY  + D   +
Sbjct: 163 DVDAKAEKLLIPVNLN-NYPSNEEIAAALLSK--VPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNAEGTSAEVHFLDLAAKLDQTAEFECGTKWAIARSPVNLGLATVPQADG 279

Query: 243 -----------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                            R++S+E+    +++AK      L+ +  +G I  +V G G ++
Sbjct: 280 KVNIDAGPPMEFPAPFGRELSKEEKFISDMDAKTGASLKLTVLNANGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     K +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYAKTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
               +    KG++ A++EV     + N+ + +R  G N   G + I   G
Sbjct: 400 NFTNVASTFKGVIRAIREVAPVLNEHNVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|312212764|emb|CBX92847.1| similar to ATP citrate lyase subunit [Leptosphaeria maculans]
          Length = 486

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 75/413 (18%), Positives = 142/413 (34%), Gaps = 81/413 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 58  DQAEATYPWLLTPGSKFVAKPDQLIKRRGKSGLLALNK----------TWAEAKAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     ++       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKP---QRVETVDGVLRQFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V +   + +  + +D     ++E++AS     ++         D    LY  + D   +
Sbjct: 163 DVDEKAEKLL--IPVDLKDYPSNEEIASTLLK-KVPSGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNAEGTSAEVHFLDLAAKIDQTAEFECGAKWAIARSVTALGIPAAPQKEA 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAM 280
                            R++S+E++   E      + + L      G +  +V G G ++
Sbjct: 280 KTTVDVGPPLEFPAPFGREMSKEEAYIAEMDAKTGASLKLTILNSVGRVWTLVAGGGASV 339

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G A   AN+ +  G   + +     + +      +    +G ++ I GGI 
Sbjct: 340 VYADAIASAGFASELANYGEYSGAPTETQTFHYARTVLDLMLRAPQHPEGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNV 378
               +    KG++ A++EV     +  + + +R  G N   G + I   G  +
Sbjct: 400 NFTNVASTFKGVIRALREVAPQLIEHKVQIWIRRAGPNYQEGLKNIKGVGQEL 452


>gi|70992211|ref|XP_750954.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus fumigatus
           Af293]
 gi|66848587|gb|EAL88916.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus fumigatus
           Af293]
          Length = 486

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 75/410 (18%), Positives = 136/410 (33%), Gaps = 81/410 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
              E     L  PG  +V K       RGK     L            +       I   
Sbjct: 58  DQTEVVYPWLLTPGAKFVAKPDQLIKRRGKSGLLALNK----------TWPEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G  +  +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEIKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++     ++E++A    + ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVNLRNYPSNEEIA-AALLSKVPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQELRDVSEED- 249
            LEINPL+++ N       +  LD     D  A +         R      L  V + D 
Sbjct: 220 YLEINPLVVIPNAEGTSAEVHFLDLAAKLDQTAEFECGTKWAIARSPANLGLATVPQTDG 279

Query: 250 --------------------------SREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                                       +++AK      L+ +  +G I  +V G G ++
Sbjct: 280 KVNIDAGPPMEFPAPFGRELSKEEKFISDMDAKTGASLKLTVLNANGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     K +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYAKTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
               +    KG++ A++EV     + N+ + +R  G N   G + I   G
Sbjct: 400 NFTNVASTFKGVIRAIREVAPVLNEHNVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|189189552|ref|XP_001931115.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187972721|gb|EDU40220.1| ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 486

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 140/413 (33%), Gaps = 81/413 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +       I   
Sbjct: 58  DQAEATYPWLLTPGSKFVAKPDQLIKRRGKSGLLALNK----------TWAEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     ++       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QRVETVDGVLRQFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V +   + +  + +D     ++E++A+     ++         D    LY  + D   +
Sbjct: 163 DVDEKAEKLL--IPVDLKEYPSNEEIAATLLK-KVPEGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNEDKTSAEVHFLDLAAKLDQTAEFECGAKWAIARSATALGIPAAPQKEA 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAM 280
                            R++S+E++   E      + + L      G +  +V G G ++
Sbjct: 280 KQTIDVGPPMEFPAPFGREMSKEEAYIAEMDAKTGASLKLTILNSVGRVWTLVAGGGASV 339

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G A   AN+ +  G   + +     + +      +    +G ++ I GGI 
Sbjct: 340 VYADAIASAGFASELANYGEYSGAPTETQTFHYARTVLDLMLRAPQHEEGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNV 378
               +    KG++ A++EV     +  + + +R  G N   G + I   G  +
Sbjct: 400 NFTNVASTFKGVIRALREVAPLLIEHKVQIWIRRAGPNYQEGLKNIKNVGQEL 452


>gi|330938221|ref|XP_003305705.1| hypothetical protein PTT_18620 [Pyrenophora teres f. teres 0-1]
 gi|311317131|gb|EFQ86172.1| hypothetical protein PTT_18620 [Pyrenophora teres f. teres 0-1]
          Length = 486

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 73/413 (17%), Positives = 140/413 (33%), Gaps = 81/413 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +       I   
Sbjct: 58  DQAEATYPWLLTPGSKFVAKPDQLIKRRGKSGLLALNK----------TWAEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     ++       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QRVETVDGVLRQFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V +   + +  + +D     ++E++A+     ++         D    LY  + D   +
Sbjct: 163 DVDEKAEKLL--IPVDLKEYPSNEEIAATLLK-KVPEGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNEDKTSAEVHFLDLAAKLDQTAEFECGAKWAIARSATALGIPAAPQKEA 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAM 280
                            R++S+E++   E      + + L      G +  +V G G ++
Sbjct: 280 KQTIDIGPPMEFPAPFGREMSKEEAYIAEMDAKTGASLKLTILNSVGRVWTLVAGGGASV 339

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G A   AN+ +  G   + +     + +      +    +G ++ I GGI 
Sbjct: 340 VYADAIASAGFASELANYGEYSGAPTETQTFHYARTVLDLMLRAPQHEEGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNV 378
               +    KG++ A++EV     +  + + +R  G N   G + I   G  +
Sbjct: 400 NFTNVASTFKGVIRALREVAPLLIEHKVQIWIRRAGPNYQEGLKNIKNVGQEL 452


>gi|302655993|ref|XP_003019754.1| hypothetical protein TRV_06177 [Trichophyton verrucosum HKI 0517]
 gi|291183523|gb|EFE39130.1| hypothetical protein TRV_06177 [Trichophyton verrucosum HKI 0517]
          Length = 602

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 136/415 (32%), Gaps = 82/415 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 174 DQAEATYPWLLAPGARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 223

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 224 AGKE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 278

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 279 DVDAKAEKLLVPVNLK-QYPSNEEIAAGLLSKI--PKGLHNVLVDFITRLYAVYVDCQFT 335

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 336 YLEINPLVVIPNEDKTSASVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLAATTASTS 395

Query: 243 ------------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
                             R++S+E+    +++AK      L+ +  +G I  +V G G +
Sbjct: 396 SKVTIDAGPPMDFPAPFGREMSKEEKYISDMDAKTGASLKLTVLNANGRIWTLVAGGGAS 455

Query: 280 MATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +           +G ++ I GGI
Sbjct: 456 VVYADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGI 515

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                +    KG++ A++E     V+    + +R  G N   G + I   G  + 
Sbjct: 516 ANFTNVATTFKGVIRALREVAPVLVEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 570


>gi|315053181|ref|XP_003175964.1| ATP-citrate synthase [Arthroderma gypseum CBS 118893]
 gi|311337810|gb|EFQ97012.1| ATP-citrate synthase [Arthroderma gypseum CBS 118893]
          Length = 485

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 137/414 (33%), Gaps = 81/414 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + + E 
Sbjct: 58  DQAEATYPWLLAPGARFVAKPDQLIKRRGKSGLLALNK----------TWPEARAWVAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLIPVNLK-QYPSNEEIAAGLLSKI--PKGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNADKTSASVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLASTTAATS 279

Query: 243 -----------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                            R++S+E+    +++AK      L+ +  +G I  +V G G ++
Sbjct: 280 KVTIDAGPPMEFPAPFGREMSKEEKYISDMDAKTGASLKLTVLNANGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +           +G ++ I GGI 
Sbjct: 340 VYADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
               +    KG++ A++E     V+    + +R  G N   G + I   G  + 
Sbjct: 400 NFTNVATTFKGVIRALREVAPVLVEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 453


>gi|239614827|gb|EEQ91814.1| ATP-citrate-lyase [Ajellomyces dermatitidis ER-3]
 gi|327352263|gb|EGE81120.1| ATP-citrate-lyase [Ajellomyces dermatitidis ATCC 18188]
          Length = 486

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 72/410 (17%), Positives = 131/410 (31%), Gaps = 81/410 (19%)

Query: 29  HAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDARLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A+L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLK-NYPSNDEIAATLLSKI--PQGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNG-----RLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N      ++  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNDTKTSAQVHFLDLAAKLDQTAEFECGTKWAVARSPAALGTPNAPKTDG 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAM 280
                            R++S+E+    +      + + L     +G I  +V G G ++
Sbjct: 280 KVTIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNANGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +    +G ++ I GGI 
Sbjct: 340 VYADAIASAGFVADLANYGEYSGAPTETQTFNYARTVLDLMLRAPMHPQGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
               +    KG++ A++EV     +  + + +R  G N   G + I   G
Sbjct: 400 NFTNVASTFKGVIRALREVASILLEHKVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|159124522|gb|EDP49640.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus fumigatus
           A1163]
          Length = 486

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 74/410 (18%), Positives = 136/410 (33%), Gaps = 81/410 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
              E     L  PG  +V K       RGK     L            +       I   
Sbjct: 58  DQTEVVYPWLLTPGAKFVAKPDQLIKRRGKSGLLALNK----------TWPEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILRE--LYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G  +  +        +    VE      +E   Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEIKVETVTG---VLRQFLVEPFVPHSQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++     ++E++A    + ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVNLRNYPSNEEIA-AALLSKVPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNAEGTSAEVHFLDLAAKLDQTAEFECGTKWAIARSPANLGLATVPQTDG 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAM 280
                            R++S+E+    +      + + L      G I  +V G G ++
Sbjct: 280 KVNIDAGPPMEFPAPFGRELSKEEKFISDMDAKTGASLKLTVLNAIGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     K +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYAKTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
               +    KG++ A++EV     + N+ + +R  G N   G + I   G
Sbjct: 400 NFTNVASTFKGVIRAIREVAPVLNEHNVQIWVRRAGPNYQEGLKNIKAVG 449


>gi|145243018|ref|XP_001394057.1| ATP-citrate synthase subunit 2 [Aspergillus niger CBS 513.88]
 gi|134078724|emb|CAK48286.1| unnamed protein product [Aspergillus niger]
          Length = 485

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 80/429 (18%), Positives = 143/429 (33%), Gaps = 85/429 (19%)

Query: 20  AKGVVISSV-HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
            + V +  V   AE     L  PG  +V K       RGK     L            + 
Sbjct: 48  PEDVAVKDVLDQAEVRYPWLLTPGSKFVAKPDQLIKRRGKSGLLALNK----------TW 97

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFI 134
                 I       +   Q       +    VE         E Y+++   R    + F 
Sbjct: 98  AEAREWIEARAAKDV---QVETVTGVLRQFLVEPFVPHPQETEYYINIHSVREGDWILF- 153

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
            + +GG+D+ +V     + +  + ++     ++E++A    + ++         D    L
Sbjct: 154 -THEGGVDVGDVDAKAEKLL--IPVNLEQYPSNEEIA-AALLSKVPKGVHNVLVDFISRL 209

Query: 195 YKAFCDKDMSLLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQ 240
           Y  + D   + LEINPL+++ N       +  LD     D  A +         R     
Sbjct: 210 YAVYVDCQFTYLEINPLVVIPNADATSADVHFLDLAAKLDQTAEFECGTKWAIARSPANL 269

Query: 241 EL------------------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGC 271
            L                        R++S+E+    E      + + L     +G +  
Sbjct: 270 GLPTLPSSDKVNIDAGPPMEFPAPFGRELSKEEKFISEMDAKTGASLKLTVLNANGRVWT 329

Query: 272 MVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGI 324
           +V G G ++   D I   G     AN+ +  G   + +     + I      S     G 
Sbjct: 330 LVAGGGASVVYADAIASAGFVSELANYGEYSGAPTETQTFNYARTILDLMLRSPIHPDGK 389

Query: 325 LINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA---- 372
           ++ I GGI     +    KG++ A++EV     +  + + +R  G N   G + I     
Sbjct: 390 VLFIGGGIANFTNVASTFKGVIRALREVAPVLNEHKVQIWVRRAGPNYQEGLKNIKAVGE 449

Query: 373 ESGLNVITA 381
           E GLN+   
Sbjct: 450 ELGLNMHVY 458


>gi|256072375|ref|XP_002572511.1| ATP-citrate synthase [Schistosoma mansoni]
 gi|238657671|emb|CAZ28743.1| ATP-citrate synthase, putative [Schistosoma mansoni]
          Length = 1164

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 128/397 (32%), Gaps = 83/397 (20%)

Query: 36  KTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQ 95
           + +     V K  +    RGK             V    +       I+ +L S      
Sbjct: 44  EWILHNNLVSKPDVLIKRRGKLGL----------VFAGFNWADSQKKIKSLLASKFTIGS 93

Query: 96  TGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
           T      ++   +E         E YL +   RTS     +    GG+D+ EV       
Sbjct: 94  TCG---ILDRFLIEPFVPHEQQEEYYLCMYTQRTSN--VILFHHAGGVDVGEVDSKVRTV 148

Query: 154 IF--KLLIDPLIGVT-SEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           +    + I  L GV   +    L +                  L+  F     + LEINP
Sbjct: 149 LSLASVKISLLSGVKCPKRARMLAE--------------FIVELHAVFDKLYFTYLEINP 194

Query: 211 LIIMKNGR----LRVLDSKISFDDNALYRHLDIQEL----------------RDVSEEDS 250
           L+I  +      + +LD     D  A +      E                     E   
Sbjct: 195 LVIYNDINEQLYIHILDVAAKLDQCAEHLFTSSLEWSVNGKMLEFPFGFGKTETKEEAYI 254

Query: 251 REIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDII-------KLYGGAP------A 294
            +++A+      L+ +  +G I  M  G G ++   D +       K  GG        A
Sbjct: 255 AKLDARTGASLKLTILNPNGRIWTMSAGGGASVIYADTVCELAEKVKAAGGISQGVKDLA 314

Query: 295 NFLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLV---KGILSAV 346
           N+ +  G   ++      K I +     +    G ++ I GGI     +    KGI+ A+
Sbjct: 315 NYGEYSGAPSEELTYEYSKTILTLMTTGEPHPDGKVLLIGGGIANFTNIAATFKGIVRAL 374

Query: 347 KEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
            E K      NI + +R  G N   G R++ E G  +
Sbjct: 375 TEFKEQLKRHNIRIFVRRAGPNYQEGLRIMRELGRTI 411


>gi|164424575|ref|XP_963624.2| hypothetical protein NCU06783 [Neurospora crassa OR74A]
 gi|18376007|emb|CAB91741.2| probable ATP citrate lyase subunit 2 [Neurospora crassa]
 gi|157070571|gb|EAA34388.2| hypothetical protein NCU06783 [Neurospora crassa OR74A]
          Length = 487

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 80/414 (19%), Positives = 140/414 (33%), Gaps = 84/414 (20%)

Query: 30  AAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREIL 87
            AE     L   G  +V K       RGK     L            +     + I E  
Sbjct: 59  QAEVTYPWLLQEGARFVAKPDQLIKRRGKSGLLALNK----------TWAEAKAWIAERA 108

Query: 88  GSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           G     + T      +    VE         E Y+++   R    + F    +GG+D+ +
Sbjct: 109 GKPQKVEHTEG---VLRQFLVEPFVPHPQETEYYININSVRDGDWILFY--HEGGVDVGD 163

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           V     +KI  + +D     ++E++AS      +         D    LY  + D   + 
Sbjct: 164 VDAKA-EKIL-IPVDLSQYPSNEELASTLLK-HVPKGIHNVLVDFIARLYAVYVDCQFTY 220

Query: 206 LEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL------------------ 242
           LEINPL+++ N       +  LD     D  A +   +   +                  
Sbjct: 221 LEINPLVVIPNEDATSAEVHFLDLAAKLDQTADFECGNKWAIARSPAALGIVAQSSNTGV 280

Query: 243 ---------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMAT 282
                          R++S+E++   E          L+ +  +G I  +V G G ++  
Sbjct: 281 NIDAGPPIEFPAPFGRELSKEEAYIAELDAKTGASLKLTVLNPNGRIWTLVAGGGASVVY 340

Query: 283 MDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITSDSSV-----KGILINIFGGIMRC 335
            D I   G     AN+ +  G   + +     + +           KG ++ I GGI   
Sbjct: 341 ADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPVSEKGKVLFIGGGIANF 400

Query: 336 DVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
             +    KG++ A++E     ++ N  + +R  G N   G + +     E GLN
Sbjct: 401 TNVASTFKGVIKALREYGKALIEHNTQIWVRRAGPNYQEGLKNLKAATQELGLN 454


>gi|327293006|ref|XP_003231200.1| ATP-citrate-lyase [Trichophyton rubrum CBS 118892]
 gi|326466619|gb|EGD92072.1| ATP-citrate-lyase [Trichophyton rubrum CBS 118892]
          Length = 486

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 136/415 (32%), Gaps = 82/415 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 58  DQAEATYPWLLAPGARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLK-QYPSNEEIAAGLLSKI--PKGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNEDKTSASVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLAATTASTS 279

Query: 243 ------------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
                             R++S+E+    +++AK      L+ +  +G I  +V G G +
Sbjct: 280 SKVTIDAGPPMDFPAPFGREMSKEEKYISDMDAKTGASLKLTVLNANGRIWTLVAGGGAS 339

Query: 280 MATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +           +G ++ I GGI
Sbjct: 340 VVYADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGI 399

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                +    KG++ A++E     V+    + +R  G N   G + I   G  + 
Sbjct: 400 ANFTNVATTFKGVIRALREVAPVLVEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 454


>gi|156060479|ref|XP_001596162.1| ATP citrate lyase, subunit 2 [Sclerotinia sclerotiorum 1980]
 gi|154699786|gb|EDN99524.1| ATP citrate lyase, subunit 2 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 488

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 73/418 (17%), Positives = 143/418 (34%), Gaps = 81/418 (19%)

Query: 24  VISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           V + +  AE     L  PG  +V K       RGK     L            +     +
Sbjct: 53  VSTVLDQAEILYPWLLVPGSKFVAKPDQLIKRRGKSGLLALNK----------TWPEAKA 102

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQG 139
            I E     +  + T      +    VE         E Y+++   R    + F  + +G
Sbjct: 103 WIAERAAKPVTVETTVG---TLRQFLVEPFVPHPEGTEYYININSQREGDWILF--THEG 157

Query: 140 GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
           G+D+ +V     + +  + +D     ++E++++     ++         D    LY  + 
Sbjct: 158 GVDVGDVDAKAEKLL--IPVDLAEYPSNEEISAGLLK-KVPQGVHNVLVDFITRLYAVYV 214

Query: 200 DKDMSLLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL--- 242
           D   + LEINPL+++ N       +  LD     D  A +         R      +   
Sbjct: 215 DCQFTYLEINPLVVIPNAEGTSAEVHFLDLAAKLDQTAEFECGVKWAVARSPAALGMTPA 274

Query: 243 ----------------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNG 275
                                 R++S+E++   E          L+ +  +G +  +V G
Sbjct: 275 KAVDGKVNIDAGPPMEFPAPFGRELSKEEAYIAELDAKTGASLKLTVLNANGRVWTLVAG 334

Query: 276 AGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITSDSSV-----KGILINI 328
            G ++   D I   G     AN+ +  G   + +     + +           +G ++ I
Sbjct: 335 GGASVVYADAIASSGFADELANYGEYSGAPTETQTYHYARTVLDLMLRAPITSEGKVLFI 394

Query: 329 FGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
            GGI     +    KG++ A++E     ++  + + +R  G N   G + I   G  +
Sbjct: 395 GGGIANFTNVASTFKGVIRALREFSSLLIEHKVQIWVRRAGPNYQEGLKNIKAVGQEL 452


>gi|242819165|ref|XP_002487261.1| ATP citrate lyase subunit (Acl), putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218713726|gb|EED13150.1| ATP citrate lyase subunit (Acl), putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 485

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 132/409 (32%), Gaps = 80/409 (19%)

Query: 29  HAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L      +V K       RGK     L            +     + I   
Sbjct: 58  DQAEATYPWLLAKDAKFVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G  +   Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEI---QVETVKGYLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A+L     +         D    LY  + D   +
Sbjct: 163 DVDAKAEKILIPVNLK-NYPSNEEIAATLLKK--VPSGLHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNG-----RLRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNANATSAEVHFLDLAAKLDQTAEFECGTKWAIARSPSALGLPAPKGDGR 279

Query: 243 ----------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMA 281
                           R++S+E+    +      + + L     +G +  +V G G ++ 
Sbjct: 280 VNIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNANGRVWTLVAGGGASVV 339

Query: 282 TMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMR 334
             D I   G     AN+ +  G   + +     + +      +    +G ++ I GGI  
Sbjct: 340 YADAIASAGFVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPQHPEGKVLFIGGGIAN 399

Query: 335 CDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
              +    KG++ A++EV     +  + + +R  G N   G + I   G
Sbjct: 400 FTNVASTFKGVIRALREVASTLNEHKVQIWVRRAGPNYQEGLKNIKAVG 448


>gi|212530266|ref|XP_002145290.1| ATP citrate lyase subunit (Acl), putative [Penicillium marneffei
           ATCC 18224]
 gi|210074688|gb|EEA28775.1| ATP citrate lyase subunit (Acl), putative [Penicillium marneffei
           ATCC 18224]
          Length = 484

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 76/409 (18%), Positives = 137/409 (33%), Gaps = 80/409 (19%)

Query: 29  HAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L      +V K       RGK     L            +     + I E 
Sbjct: 58  DQAEATYPWLLAKDARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QQVEHIKGYLRQFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A+L     +         D    LY  + D   +
Sbjct: 163 DVDAKAEKILIPVNLKNFPS-NEEIAATLLKK--VPSGIHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNTTATSAEVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLPAPRGDGK 279

Query: 243 ----------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                           R++S+E+    +++AK      L+ +  +G I  +V G G ++ 
Sbjct: 280 VNVDAGPPMEFPAPFGRELSKEEKFISDMDAKTGASLKLTVLNANGRIWTLVAGGGASVV 339

Query: 282 TMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMR 334
             D I   G     AN+ +  G   + +     + +      +    +G ++ I GGI  
Sbjct: 340 YADAIASAGFVSELANYGEYSGAPTETQTFNYARTVLDLMLRAPQRPEGKVLFIGGGIAN 399

Query: 335 CDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
              +    KG++ A++EV     +  + + +R  G N   G + I   G
Sbjct: 400 FTNVASTFKGVIRALREVASTLNEHKVQIWVRRAGPNYQEGLKNIKAVG 448


>gi|67523959|ref|XP_660039.1| hypothetical protein AN2435.2 [Aspergillus nidulans FGSC A4]
 gi|40744985|gb|EAA64141.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259487848|tpe|CBF86848.1| TPA: citrate lyase subunit (Eurofung) [Aspergillus nidulans FGSC
           A4]
          Length = 485

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 79/419 (18%), Positives = 148/419 (35%), Gaps = 84/419 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE     L  PG  +V K       RGK     L            +  +    +  +
Sbjct: 58  DQAEVTYPWLLTPGSKFVAKPDQLIKRRGKSGLLALNKTWAEAREWIEARATKEQQVETV 117

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
           +G              +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 118 VG-------------VLRHFLVEPFVPHPQETEYYINIHSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++     ++E++AS   + ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVNLKNYPSNEEIAS-ALLSKVPKGIHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALYR------------HLDIQEL----- 242
            LEINPL+++ N       +  LD     D  A +             +L +  L     
Sbjct: 220 YLEINPLVVIPNADATSADVHFLDLAAKLDQTAEFECGTKWAVARSPANLGLAALPTSDK 279

Query: 243 ----------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                           R++S+E+    +++AK      L+ +  +G +  +V G G ++ 
Sbjct: 280 VNIDAGPPMEFPAPFGRELSKEEKFISDMDAKTGASLKLTVLNPNGRVWTLVAGGGASVV 339

Query: 282 TMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMR 334
             D I   G     AN+ +  G   + +     + I      S     G ++ I GGI  
Sbjct: 340 YADAIASAGFVSELANYGEYSGAPTETQTFNYARTILDLMLRSPIHPDGKVLFIGGGIAN 399

Query: 335 CDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA----ESGLNVITA 381
              +    KG++ A++EV     +  + + +R  G N   G + I     E GLN+   
Sbjct: 400 FTNVASTFKGVIRALREVAPVLNEHKVQIWVRRAGPNYQEGLKNIKAVGEELGLNMHVY 458


>gi|326484007|gb|EGE08017.1| ATP-citrate synthase [Trichophyton equinum CBS 127.97]
          Length = 486

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 76/415 (18%), Positives = 136/415 (32%), Gaps = 82/415 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 58  DQAEATYPWLLAPGARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLIPVNLK-QYPSNEEIAAGLLSKI--PKGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNEDKTSASVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLAASAAATS 279

Query: 243 ------------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
                             R++S+E+    +++AK      L+ +  +G I  +V G G +
Sbjct: 280 SKVTIDAGPPMDFPAPFGREMSKEEKYISDMDAKTGASLKLTVLNANGRIWTLVAGGGAS 339

Query: 280 MATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +           +G ++ I GGI
Sbjct: 340 VVYADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGI 399

Query: 333 MRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
                +    KG++ A++E     V+    + +R  G N   G + I   G  + 
Sbjct: 400 ANFTNVATTFKGVIRALREVAPVLVEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 454


>gi|289679951|ref|ZP_06500841.1| succinyl-CoA synthetase subunit beta [Pseudomonas syringae pv.
           syringae FF5]
          Length = 93

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/92 (55%), Positives = 74/92 (80%)

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
           ++V  AFKII SD++V  +L+NIFGGI+RCD++ +GI+ AVKEV + IP+V+RLEG N +
Sbjct: 1   ERVTEAFKIILSDANVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAE 60

Query: 366 IGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +G +++AESGLN+I A  L DAAQ++V A +G
Sbjct: 61  LGAKVLAESGLNIIAATSLTDAAQQVVKAAEG 92


>gi|39977671|ref|XP_370223.1| hypothetical protein MGG_06720 [Magnaporthe oryzae 70-15]
 gi|145013763|gb|EDJ98404.1| hypothetical protein MGG_06720 [Magnaporthe oryzae 70-15]
          Length = 486

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 78/414 (18%), Positives = 144/414 (34%), Gaps = 83/414 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE     L  PG  +V K       RGK     L            +     + + E 
Sbjct: 58  DQAEVTYPWLLQPGAKFVAKPDQLIKRRGKSGLLALNK----------TWAEAKAWVAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVEHVTG---VLRNFLVEPFVPHPDGTEYYININSVRDGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V +   + +  + +D     ++E++AS     ++         D    LY  + D   +
Sbjct: 163 DVDEKAEKLL--IPVDLSEYPSNEEIASALLK-KVPKGIHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      L        
Sbjct: 220 YLEINPLVVIPNEDATSAAVHFLDLAAKLDQTADFECGVKWAIARSPAALGLAATASSKI 279

Query: 243 ---------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMAT 282
                          R++++E++   E      + + L     +G +  +V G G ++  
Sbjct: 280 NIDAGPPMEFPAPFGRELTKEEAYIAELDAKTGASLKLTVLNGNGRVWTLVAGGGASVVY 339

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIMRC 335
            D I   G A   AN+ +  G   + +     + +         + +G ++ I GGI   
Sbjct: 340 ADAIASAGFADQLANYGEYSGAPTESQTYHYARTVLDLMLRAPLAPEGKVLFIGGGIANF 399

Query: 336 DVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
             +    KG++ A++E      + N+ + +R  G N   G R +     E GLN
Sbjct: 400 TNVASTFKGVIKALREYAKALNEHNVSIWVRRAGPNYQEGLRNMKAATQELGLN 453


>gi|225684100|gb|EEH22384.1| ATP citrate lyase subunit [Paracoccidioides brasiliensis Pb03]
          Length = 486

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 76/420 (18%), Positives = 136/420 (32%), Gaps = 85/420 (20%)

Query: 29  HAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDIRLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYINISSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++     +++++AS   + ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVNLANYPSNDEIAS-ALLSKIPSGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNPSKTSAAVHFLDLAAKLDQTAEFECGTKWAIARSPAALGIRKATNTDA 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAM 280
                            R+ S+E+    +      S + L     +G I  +V G G ++
Sbjct: 280 KVTVDAGPPMEFPPPFGREPSKEEKFVADMDAKTGSSLKLTVLNPNGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + I            G ++ I GGI 
Sbjct: 340 IYADAIASAGFVSELANYGEYSGAPTETQTFNYARTILDLMLRAPLHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +    KG++ A++EV     +    + +R  G N   G + I     E GLN+   
Sbjct: 400 NFTNVASTFKGVIRALREVAPILNEHKTQIWVRRAGPNYQEGLKNIKAVGEELGLNMHVY 459


>gi|73293989|gb|AAZ74671.1| ATP citrate lyase beta subunit [Sulfurovum lithotrophicum]
          Length = 311

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 117/305 (38%), Gaps = 41/305 (13%)

Query: 92  ITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKD 149
           +T  +G  G   +   VE        +E Y+S              S +GGM++EE    
Sbjct: 15  VTLLSGEKGHLTH-FIVEPFTPHTQEQEYYISATTVGEDD--VLFMSAEGGMEVEEGWD- 70

Query: 150 YPQKIFKLLIDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLL 206
             +K+ ++ I     +   D+  +       ++  + +          +K + D + + L
Sbjct: 71  --EKVNEVHIPIN--MPDADMEKMVKSHIPADIPDENKTAFASFAIQFFKFYRDMNFAYL 126

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQ 257
           EINP++++  G + +LD     DD A +   D            + D+S+E+    EA  
Sbjct: 127 EINPIVMLDGGEMAILDLVARLDDTAGFMMKDAWGDIEFPTAFGMEDMSDEEKAIAEADS 186

Query: 258 HNLSYIALD-----GNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAA 310
            + + + L      G I  MV G G ++   D I  + G    AN+ +  GG    +   
Sbjct: 187 KSGASLKLTILNPMGRIWTMVAGGGASVVYADTIADFAGVEDLANYGEYSGGPTTGETKF 246

Query: 311 A----FKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMR 358
                F ++T     +G ++ I G I     + K   GI+ A      K  +    + +R
Sbjct: 247 YAETIFDLMTRYDDPRGKVLIIGGAIANFTDVAKTFTGIIQAFEIYADKLKEHKTKIYVR 306

Query: 359 LEGAN 363
             G N
Sbjct: 307 RGGPN 311


>gi|226293495|gb|EEH48915.1| ATP-citrate-lyase [Paracoccidioides brasiliensis Pb18]
          Length = 486

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 76/420 (18%), Positives = 136/420 (32%), Gaps = 85/420 (20%)

Query: 29  HAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDIRLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYINISSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++     +++++AS   + ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVNLANYPSNDEIAS-ALLSKIPSGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNPSKTSAAVHFLDLAAKLDQTAEFECGTKWAIARSPAALGIRKATNTDA 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAM 280
                            R+ S+E+    +      S + L     +G I  +V G G ++
Sbjct: 280 KVTIDAGPPMEFPPPFGREPSKEEKFVADMDAKTGSSLKLTVLNPNGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + I            G ++ I GGI 
Sbjct: 340 IYADAIASAGFVSELANYGEYSGAPTETQTFNYARTILDLMLRAPLHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA----ESGLNVITA 381
               +    KG++ A++EV     +    + +R  G N   G + I     E GLN+   
Sbjct: 400 NFTNVASTFKGVIRALREVAPILNEHKTQIWVRRAGPNYQEGLKNIKAVGEELGLNMHVY 459


>gi|7159697|emb|CAA10666.1| ATP-citrat-lyase [Gibberella pulicaris]
          Length = 489

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 143/415 (34%), Gaps = 82/415 (19%)

Query: 24  VISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           V   ++ AE     L  P   +V K       RGK     L            S     +
Sbjct: 53  VADILNQAEVTYPWLLQPDAKFVAKPDQLIKRRGKSGLLALNK----------SWPEAKA 102

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQG 139
            + E  G     +Q   T   +    VE         E Y+++   R +  + F  + +G
Sbjct: 103 WVAERAGKE---QQVEHTTGVLRQFLVEPFVPHPQDTEYYININSVRDATGILF--THEG 157

Query: 140 GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
           G+D+ +V     + +  + +D     ++E++A+     ++         D    LY  + 
Sbjct: 158 GVDVGDVDAKAEKLL--IPVDLAEYPSNEEIAATLLK-KVPQGVHNVLVDFITRLYAVYV 214

Query: 200 DKDMSLLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQEL--- 242
           D   + LEINPL+++ N       +  LD     D  A +         R      L   
Sbjct: 215 DCQFTYLEINPLVVIPNEDKTSAEVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNI 274

Query: 243 -----------------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVN 274
                                  R++++E++   +          L+ +   G I  +V 
Sbjct: 275 APSADGKISIDAGPPMEFPAPFGRELTKEEAYIADLDAKTGASLKLTVLNAKGRIWTLVA 334

Query: 275 GAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILIN 327
           G G ++   D I   G     AN+ +  G   + +     + +      +  + +G ++ 
Sbjct: 335 GGGASVVYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLLLRAPKTDEGKVLF 394

Query: 328 IFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAES 374
           I GGI     +    KG++ A+++     V+    + +R  G N   G + +  +
Sbjct: 395 IGGGIANFTNVASTFKGVIRALRDFAPKLVEHKTAIWVRRAGPNYQEGLKNMKAA 449


>gi|270668481|ref|ZP_06222536.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
 gi|270316678|gb|EFA28470.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
          Length = 112

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 58/103 (56%), Positives = 82/103 (79%)

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIP 354
           NFLDVGGGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P
Sbjct: 8   NFLDVGGGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVP 67

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +V+RLEG N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 68  VVVRLEGTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 110


>gi|221486273|gb|EEE24534.1| ATP-citrate synthase, putative [Toxoplasma gondii GT1]
          Length = 1281

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 77/443 (17%), Positives = 139/443 (31%), Gaps = 101/443 (22%)

Query: 19  VAKGVV-----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           V +GV       + +    +    L      VK  +    RGK             V+++
Sbjct: 54  VLRGVCVAVNSATDLTELPNDHPWLLTSRLTVKPDVLLKRRGKSGL----------VKLD 103

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---ELYLSLLVDRTSGM 130
            S      ++R ++G+   T+  G TG  ++   VE          E Y+++   R    
Sbjct: 104 LSWPEAQKELRALMGTQFTTQ--GLTG-TLDHFIVEPFFPHDEATNEFYVAIRTLREGDE 160

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-------------------DVA 171
           V F  S +GG+D+  V +   + +  +  D      +                    D  
Sbjct: 161 VLF--SPRGGVDVGNVDEHARRVLIPIACDEARASQAAGAKTNGMADASASEGDATKDAR 218

Query: 172 SLCDM-LELQG----------------------------QARIDGGDLFPNLYKAFCDKD 202
             C   L L+                              A+         LY+ FC+  
Sbjct: 219 KACTQPLALEATRKYGIECRLTQEELEALVAPLVTDVATDAKKAMPAFLAQLYRQFCEMH 278

Query: 203 MSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREI 253
            + LEINP           +LD     D  A +                R  +EE+    
Sbjct: 279 FAFLEINPFCFDVATQTFVILDCAAKLDHTAEFLCDKKWGHVSFPSPFGRRFTEEERYIR 338

Query: 254 E-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD 306
           E          L+ +   G I  ++ G G ++   D +    +G    N+ +  G   + 
Sbjct: 339 ELDSKTGASLKLTVLNPKGRIWTLIAGGGASVVYADTVCDLGFGDELCNYGEYSGAPSEV 398

Query: 307 KVAAAFKIITSDSSV------KGILINIFGGIMRCDVLVK---GILSAVKEV-----KIN 352
                 K I    +       +G ++ I GGI     +     G++ A++E      +  
Sbjct: 399 TTYEYTKTILGLMTAPGSYREEGKILLIGGGIANFTNVADTFRGVIRALREFREQLREFK 458

Query: 353 IPLVMRLEGANVDIGNRLIAESG 375
           + + +R  G N   G + + E G
Sbjct: 459 VRIYVRRGGPNYQEGLKRMREVG 481


>gi|171689598|ref|XP_001909739.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944761|emb|CAP70872.1| unnamed protein product [Podospora anserina S mat+]
          Length = 488

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 77/420 (18%), Positives = 141/420 (33%), Gaps = 84/420 (20%)

Query: 20  AKGVVISSV-HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
            +   +S+V   AE     L      +V K       RGK     L            + 
Sbjct: 48  PEDQDVSTVLDQAEVTYPWLLQSDAKFVAKPDQLIKRRGKSGLLALNK----------TW 97

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFI 134
               + I E  G    T+Q       +    VE         E Y+++   R    + F 
Sbjct: 98  PEAKAWIAERAGK---TQQVEHVEGVLRQFLVEPFVPHPANTEYYININSVRDGDWILF- 153

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQARIDGGDLFPN 193
            + +GG+D+ +V +   +KI  + +D     +  E  A+L   +           D    
Sbjct: 154 -THEGGVDVGDVDEKA-EKIL-IPVDLSEFPSNEEIAATLLKKI--PKGLHNVLVDFIVR 208

Query: 194 LYKAFCDKDMSLLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL------ 242
           LY  + D   + +EINPL+++ N       +  LD     D  A +       +      
Sbjct: 209 LYAVYVDCQFTYMEINPLVVIPNEDATSASVHFLDLAAKLDQTADFECGVKWAIARSPAA 268

Query: 243 ----------------------------RDVSEEDSREIE-----AKQHNLSYIALDGNI 269
                                       R++S+E++   E          L+ +  +G I
Sbjct: 269 LGITAPSSANGSVNIDAGPPIEFPAPFGRELSKEEAYIAELDAKTGASLKLTVLNPNGRI 328

Query: 270 GCMVNGAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITSDSSV-----K 322
             +V G G ++   D I   G     AN+ +  G   + +     + +           K
Sbjct: 329 WTLVAGGGASVVYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPLSDK 388

Query: 323 GILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAES 374
           G ++ I GGI     +    KG++ A++E      + N+ + +R  G N   G + +  +
Sbjct: 389 GKVLFIGGGIANFTNVASTFKGVIKALREYAKALNEHNVQIWVRRAGPNYQEGLKNMKAA 448


>gi|237833545|ref|XP_002366070.1| ATP-citrate synthase, putative [Toxoplasma gondii ME49]
 gi|211963734|gb|EEA98929.1| ATP-citrate synthase, putative [Toxoplasma gondii ME49]
          Length = 1281

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 77/443 (17%), Positives = 139/443 (31%), Gaps = 101/443 (22%)

Query: 19  VAKGVV-----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           V +GV       + +    +    L      VK  +    RGK             V+++
Sbjct: 54  VLRGVCVAVNSATDLTELPNDHPWLLTSRLTVKPDVLLKRRGKSGL----------VKLD 103

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---ELYLSLLVDRTSGM 130
            S      ++R ++G+   T+  G TG  ++   VE          E Y+++   R    
Sbjct: 104 LSWPEAQKELRALMGTQFRTQ--GLTG-TLDHFIVEPFFPHDEATNEFYVAIRTLREGDE 160

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-------------------DVA 171
           V F  S +GG+D+  V +   + +  +  D      +                    D  
Sbjct: 161 VLF--SPRGGVDVGNVDEHARRVLIPIACDEARASQAAGAKTNGMADASASEGDATKDAR 218

Query: 172 SLCDM-LELQG----------------------------QARIDGGDLFPNLYKAFCDKD 202
             C   L L+                              A+         LY+ FC+  
Sbjct: 219 KACTQPLALEATRKYGIECRLTQEELEALVAPLVTDVATDAKKAMPAFLAQLYRQFCEMH 278

Query: 203 MSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREI 253
            + LEINP           +LD     D  A +                R  +EE+    
Sbjct: 279 FAFLEINPFCFDVATQTFVILDCAAKLDHTAEFLCDKKWGHVSFPSPFGRRFTEEERYIR 338

Query: 254 E-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD 306
           E          L+ +   G I  ++ G G ++   D +    +G    N+ +  G   + 
Sbjct: 339 ELDSKTGASLKLTVLNPKGRIWTLIAGGGASVVYADTVCDLGFGDELCNYGEYSGAPSEV 398

Query: 307 KVAAAFKIITSDSSV------KGILINIFGGIMRCDVLVK---GILSAVKEV-----KIN 352
                 K I    +       +G ++ I GGI     +     G++ A++E      +  
Sbjct: 399 TTYEYTKTILGLMTAPGSYREEGKILLIGGGIANFTNVADTFRGVIRALREFREQLREFK 458

Query: 353 IPLVMRLEGANVDIGNRLIAESG 375
           + + +R  G N   G + + E G
Sbjct: 459 VRIYVRRGGPNYQEGLKRMREVG 481


>gi|76162633|gb|AAX30586.2| SJCHGC05313 protein [Schistosoma japonicum]
          Length = 115

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/96 (44%), Positives = 64/96 (66%)

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           GGGA   +V  AF++ITSD  V  IL+NIFGGIMRCD++ +GI++A  E+ I +P+++RL
Sbjct: 1   GGGATATQVTEAFRLITSDPKVNAILVNIFGGIMRCDIIAQGIVAAATELNIKVPIIVRL 60

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           +G  V+    +IA S + ++   DLD+AA   V   
Sbjct: 61  QGTRVEDAKAIIATSHMKILGCSDLDEAAHMSVKLA 96


>gi|296814084|ref|XP_002847379.1| ATP-citrate synthase [Arthroderma otae CBS 113480]
 gi|238840404|gb|EEQ30066.1| ATP-citrate synthase [Arthroderma otae CBS 113480]
          Length = 483

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 134/413 (32%), Gaps = 81/413 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L      +V K       RGK     L            +     + I E 
Sbjct: 58  DQAEATYPWLLSKDARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGRE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPNLYKAFCDKDM 203
           +V     + +  + ++     ++E +A    +L ++         D    LY  + D   
Sbjct: 163 DVDAKAEKLL--VPVNLKQYPSNEQIA--AGLLSKIPKGLHNVLVDFITRLYAVYVDCQF 218

Query: 204 SLLEINPLIIMKNG-----RLRVLDSKISFDDNALYRHL-DIQELRDV------------ 245
           + LEINPL+++ +       +  LD     D  A +         R              
Sbjct: 219 TYLEINPLVVIPDASKSSATVHFLDLAAKLDQTAEFECGTKWAAARSPAALGLAATAAAK 278

Query: 246 ---------------------SEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMA 281
                                 E    +++AK      L+ +  +G I  +V G G ++ 
Sbjct: 279 VTIDAGPPMEFPAPFGREMSKEERYISDMDAKTGASLKLTVLNANGRIWTLVAGGGASVV 338

Query: 282 TMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIMR 334
             D I   G     AN+ +  G   + +     + +           +G ++ I GGI  
Sbjct: 339 YADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGIAN 398

Query: 335 CDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
              +    KG++ A++E     V+    + +R  G N   G + I   G  + 
Sbjct: 399 FTNVATTFKGVIRALREVAPVLVEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 451


>gi|121699810|ref|XP_001268170.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus clavatus
           NRRL 1]
 gi|119396312|gb|EAW06744.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus clavatus
           NRRL 1]
          Length = 486

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 77/408 (18%), Positives = 141/408 (34%), Gaps = 83/408 (20%)

Query: 39  PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP 98
           PG  +V K       RGK     L            +       I    G  +   Q   
Sbjct: 70  PGAKFVAKPDQLIKRRGKSGLLALNK----------TWADAREWIEARAGKEI---QVET 116

Query: 99  TGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK 156
               +    VE         E Y+++   R    + F  + +GG+D+ +V     + +  
Sbjct: 117 VTGVLRHFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVGDVDAKAEKLL-- 172

Query: 157 LLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
           + ++     ++E++A    + ++         D    LY  + D   + LEINPL+++ N
Sbjct: 173 IPVNLKNYPSNEEIA-AALLSKVPKGVHNVLVDFISRLYAVYVDCQFTYLEINPLVVIPN 231

Query: 217 -----GRLRVLDSKISFDDNALY---------RHLDIQEL-------------------- 242
                  +  LD     D  A +         R      L                    
Sbjct: 232 AEGTSAEVHFLDLAAKLDQTAEFECGTKWAIARSPANLGLATVPQNDGKVNIDAGPPMEF 291

Query: 243 -----RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG- 291
                R++S+E+    +++AK      L+ +  +G +  +V G G ++   D I   G  
Sbjct: 292 PAPFGRELSKEEKFISDMDAKTGASLKLTVLNANGRVWTLVAGGGASVVYADAIASAGFV 351

Query: 292 -APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIMRCDVLV---KGI 342
              AN+ +  G   + +     K +            G ++ I GGI     +    KG+
Sbjct: 352 SELANYGEYSGAPTETQTYNYAKTVLDLMLRAPIHPDGKVLFIGGGIANFTNVASTFKGV 411

Query: 343 LSAVKEV-----KINIPLVMRLEGANVDIGNRLIA----ESGLNVITA 381
           + A++EV     + N+ + +R  G N   G + I     E GLN+   
Sbjct: 412 IRAIREVAPVLNEHNVQIWVRRAGPNYQEGLKNIKAVGEELGLNMHVY 459


>gi|302916511|ref|XP_003052066.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733005|gb|EEU46353.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 489

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 138/402 (34%), Gaps = 84/402 (20%)

Query: 42  LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGS 101
            +V K       RGK     L            +     + + E  G     +Q   T  
Sbjct: 73  KFVAKPDQLIKRRGKSGLLALNK----------TWPEAKAWVAERAGKE---QQVEHTTG 119

Query: 102 RVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159
            +    VE         E Y+++   R    + F  + +GG+D+ +V     + +  + +
Sbjct: 120 VLRQFLVEPFVPHPQDTEYYININSVRDGDWILF--THEGGVDVGDVDAKAEKLL--IPV 175

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR- 218
           D     ++E++A+      +         D    LY  + D   + LEINPL+++ N   
Sbjct: 176 DLAEYPSNEEIAATLLK-NVPEGVHNVLVDFITRLYAVYVDCQFTYLEINPLVVIPNEDK 234

Query: 219 ----LRVLDSKISFDDNALY---------RHLDIQEL----------------------- 242
               +  LD     D  A +         R      L                       
Sbjct: 235 TSAAVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNVAAATGDKVNIDAGPPMEFPA 294

Query: 243 ---RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG--GA 292
              R++++E++   +          L+ +   G I  +V G G ++   D I   G    
Sbjct: 295 PFGRELTKEEAYIADLDAKTGASLKLTVLNAKGRIWTLVAGGGASVVYADAIASAGFADE 354

Query: 293 PANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMRCDVLV---KGILS 344
            AN+ +  G   + +     + +      +  S KG ++ I GGI     +    KG++ 
Sbjct: 355 LANYGEYSGAPTESQTYHYARTVLDLLLRAPESDKGKVLFIGGGIANFTNVASTFKGVIR 414

Query: 345 AVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
           A+++      + N+ + +R  G N   G + +     E GLN
Sbjct: 415 ALRDFAPKLNEHNVQIWVRRAGPNYQEGLKNMKAATQELGLN 456


>gi|255956567|ref|XP_002569036.1| Pc21g20490 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590747|emb|CAP96946.1| Pc21g20490 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 485

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 74/413 (17%), Positives = 135/413 (32%), Gaps = 81/413 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE +   L  PG  +V K       RGK     L            +       I   
Sbjct: 58  DQAEVSYPWLLTPGAKFVAKPDQLIKRRGKSGLLALNK----------TWAEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
               +   Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 ATKDV---QVETVTGVLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A+L     +         D    LY  + D   +
Sbjct: 163 DVDAKAEKLLIPVNLK-QYPSNEEIAATLLSK--VPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNG-----RLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNADATSAEVHFLDLAAKLDQTAEFECGTKWAVARSPAALGSPALASADG 279

Query: 243 -----------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                            R++S+E+    +++AK      L+ +   G +  +V G G ++
Sbjct: 280 KVSIDAGPPMEFPAPFGRELSKEEKFISDMDAKTGASLKLTVLNSSGRVWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTFNYARTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNV 378
               +    KG++ A++EV     +  + + +R  G N   G + I   GL +
Sbjct: 400 NFTNVASTFKGVIRAIREVANLLNEHKVQIWVRRAGPNYQEGLKNIKSVGLEL 452


>gi|46123323|ref|XP_386215.1| hypothetical protein FG06039.1 [Gibberella zeae PH-1]
          Length = 489

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 72/415 (17%), Positives = 141/415 (33%), Gaps = 82/415 (19%)

Query: 24  VISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           V   ++ AE     L  P   +V K       RGK     L            S     +
Sbjct: 53  VADILNQAEVTYPWLLQPDAKFVAKPDQLIKRRGKSGLLALNK----------SWPEAKA 102

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQG 139
            + E  G     +Q   T   +    VE         E Y+++   R    + F  + +G
Sbjct: 103 WVAERAGKE---QQVEHTTGVLRQFLVEPFVPHPQDTEYYININSVRDGDWILF--THEG 157

Query: 140 GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
           G+D+ +V     + +  + +D     ++E++A+     ++         D    LY  + 
Sbjct: 158 GVDVGDVDAKAEKLL--IPVDLAEYPSNEEIAATLLK-KVPQGVHNVLVDFITRLYAVYV 214

Query: 200 DKDMSLLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQEL--- 242
           D   + LEINPL+++ N       +  LD     D  A +         R      L   
Sbjct: 215 DCQFTYLEINPLVVIPNEDKTSAEVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNI 274

Query: 243 -----------------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVN 274
                                  R++++E++   +          L+ +   G I  +V 
Sbjct: 275 APSADGKISIDAGPPMEFPAPFGRELTKEEAYIADLDAKTGASLKLTVLNAKGRIWTLVA 334

Query: 275 GAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILIN 327
           G G ++   D I   G     AN+ +  G   + +     + +      +  + +G ++ 
Sbjct: 335 GGGASVVYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLLLRAPKTEEGKVLF 394

Query: 328 IFGGIMRCDVLV---KGILSAVKEVKINIP-----LVMRLEGANVDIGNRLIAES 374
           I GGI     +    KG++ A+++    +      + +R  G N   G + +  +
Sbjct: 395 IGGGIANFTNVASTFKGVIRALRDFAPKLIEHKTAIWVRRAGPNYQEGLKNMKAA 449


>gi|329727816|gb|EGG64267.1| CoA-ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 87

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/85 (55%), Positives = 65/85 (76%)

Query: 312 FKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLI 371
           FKII  D +VKGI +NIFGGIM+CDV+ +GI+ AVKEV + +PLV+RLEG NV++G +++
Sbjct: 1   FKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKIL 60

Query: 372 AESGLNVITAIDLDDAAQKIVHAVK 396
            +SGL +  A  + + AQKIV  VK
Sbjct: 61  KDSGLAIEPAATMAEGAQKIVKLVK 85


>gi|221508061|gb|EEE33648.1| ATP-citrate synthase, putative [Toxoplasma gondii VEG]
          Length = 1281

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 77/443 (17%), Positives = 140/443 (31%), Gaps = 101/443 (22%)

Query: 19  VAKGVVI-----SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           V +GV +     + +    +    L      VK  +    RGK             V+++
Sbjct: 54  VLRGVCVAVNSTTDLTELPNDHPWLLTSRLTVKPDVLLKRRGKSGL----------VKLD 103

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---ELYLSLLVDRTSGM 130
            S      ++R ++G+   T+  G TG  ++   VE          E Y+++   R    
Sbjct: 104 LSWPEAQKELRALMGTQFTTQ--GLTG-TLDHFIVEPFFPHDEATNEFYVAIRTLREGDE 160

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-------------------DVA 171
           V F  S +GG+D+  V +   + +  +  D      +                    D  
Sbjct: 161 VLF--SPRGGVDVGNVDEHARRVLIPIACDEARASQAAGAKTNGMADASASEGDATKDAR 218

Query: 172 SLCDM-LELQG----------------------------QARIDGGDLFPNLYKAFCDKD 202
             C   L L+                              A+         LY+ FC+  
Sbjct: 219 KACTQPLALEATRKYGIECRLTQEELEALVAPLVTDVATDAKKAMPAFLAQLYRQFCEMH 278

Query: 203 MSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREI 253
            + LEINP           +LD     D  A +                R  +EE+    
Sbjct: 279 FAFLEINPFCFDVATQTFVILDCAAKLDHTAEFLCDKKWGHVSFPSPFGRRFTEEERYIR 338

Query: 254 E-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD 306
           E          L+ +   G I  ++ G G ++   D +    +G    N+ +  G   + 
Sbjct: 339 ELDSKTGASLKLTVLNPKGRIWTLIAGGGASVVYADTVCDLGFGDELCNYGEYSGAPSEV 398

Query: 307 KVAAAFKIITSDSSV------KGILINIFGGIMRCDVLVK---GILSAVKEV-----KIN 352
                 K I    +       +G ++ I GGI     +     G++ A++E      +  
Sbjct: 399 TTYEYTKTILGLMTAPGSYREEGKILLIGGGIANFTNVADTFRGVIRALREFREQLREFK 458

Query: 353 IPLVMRLEGANVDIGNRLIAESG 375
           + + +R  G N   G + + E G
Sbjct: 459 VRIYVRRGGPNYQEGLKRMREVG 481


>gi|299739746|ref|XP_001839751.2| ATP citrate lyase isoform 2 [Coprinopsis cinerea okayama7#130]
 gi|298403919|gb|EAU82052.2| ATP citrate lyase isoform 2 [Coprinopsis cinerea okayama7#130]
          Length = 1160

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 87/473 (18%), Positives = 142/473 (30%), Gaps = 119/473 (25%)

Query: 3   IHEYQAKALLRKYNV---PVAKGVVISS--VHAAESAIK------------------TLP 39
           I EY AK LL  +     PVA    + +   + A    +                   + 
Sbjct: 6   IREYDAKLLLAYWLERAPPVAPHAQVKTKFAYPAPKVAQVSWDPETNSITPDSKLPSWVF 65

Query: 40  GPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
               V K       RGK     L            +     + I E  G     +Q    
Sbjct: 66  TTKLVAKPDQLIKRRGKAGLLTLNK----------TWDEAKAWISERAGKP---QQVESV 112

Query: 100 GSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
              +N   VE         E Y+ +   R    + F  + +GG+DI +V       +  +
Sbjct: 113 TGTLNNFIVEPFLPHPSNTEYYVCITSQREGDSILF--THEGGVDIGDVDAKA--LVLNI 168

Query: 158 LIDPLIGVTSEDVAS-LCDML--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            +              + D L   +  + +    D    LY  + D   + LEINPL+++
Sbjct: 169 PVT-----DPFPTRETIADTLLTHVPAEKKDTLVDFLIRLYSVYVDLHFAYLEINPLVVL 223

Query: 215 KNG-----RLRVLDSKISFDDNALYRH-LDIQELRDVS-----EEDSREIEAKQHN---- 259
                   ++  LD     D  A           RD+S     E +S +  A +      
Sbjct: 224 DGENGAPPQIHYLDMAAKLDQTAESICGPKWAIARDLSVYEANESESSKATASKGGKINT 283

Query: 260 -----------------------------------LSYIALDGNIGCMVNGAGLAMATMD 284
                                              L+ +  +G I  MV G G ++   D
Sbjct: 284 DRGPPMVWPAPFGRDLTKEEAYIQKLDASTGASLKLTVLNPEGRIWTMVAGGGASVVYSD 343

Query: 285 IIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT--------SDSSVKGILINIFGGIMR 334
            I  +G A   AN+ +  G   + +     K I                I+         
Sbjct: 344 AIAAHGYAHELANYGEYSGAPSEGQTYEYAKTIIDLITRGTPHPDGKILIIGGGIANFTN 403

Query: 335 CDVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNR---LIAES-GLNV 378
                KGI+ A+KE K       + + +R  G N   G +   L+ ES G+ +
Sbjct: 404 VAATFKGIIRALKEYKAGLINHQVKIFVRRGGPNYQEGLKAMRLLGESLGVPI 456


>gi|321258632|ref|XP_003194037.1| ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1)
           [Cryptococcus gattii WM276]
 gi|317460507|gb|ADV22250.1| ATP-citrate synthase subunit 1 (ATP-citrate (pro-S-)-lyase 1),
           putative [Cryptococcus gattii WM276]
          Length = 1150

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 85/447 (19%), Positives = 153/447 (34%), Gaps = 87/447 (19%)

Query: 3   IHEYQAKAL----LRKYNVPVA-----KGVVISSVH-AAESAIKTL--------PGPLYV 44
           I EY AK L    L +   P+          +       + A K L          P +V
Sbjct: 6   IREYDAKQLVSYWLNRSPTPIPCKTDTSFTAVQVAQVQWDPATKQLSPPIKPGQGLPDWV 65

Query: 45  VKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
             S++     GK           G + +    +   + I +  G  +  ++T      +N
Sbjct: 66  FTSKLV----GKPDQLIKRRGKAGLLCLNKGWEETGAWIEQRAGKPVTVEKTTG---TLN 118

Query: 105 CVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
              +E         E Y+ +   R    + F  + +GG+D+ +V      K  KLLI   
Sbjct: 119 TFIIEPFCPHPAETEYYVCINSAREGDWILF--THEGGVDVGDVDA----KALKLLIAVG 172

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGR-- 218
               + +      +  +    +    D    LY  + D   + LEINPL+ +   +G+  
Sbjct: 173 EEFPTRETIISTLLANVAPAKQDVLCDFLIRLYGVYVDLHFAYLEINPLVCLDAVDGKPA 232

Query: 219 -LRVLDSKISFDDNALYRHLDIQEL-----------------------------RDVSEE 248
            ++ LD     D  A +    +  +                             RD+++E
Sbjct: 233 EIQYLDMAAKLDQTADFLCGPMWAVARDVSSTTTGGAGIKADRGPPMVWPAPFGRDLTKE 292

Query: 249 DSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGG 301
           ++   +          L+ +  +G +  MV G G ++   D I   G A   AN+ +  G
Sbjct: 293 EAYIQKLDASTGASLKLTVLNAEGRVWTMVAGGGASVVYSDAIAAAGFAHELANYGEYSG 352

Query: 302 GADQDKVAAAFKIITSDS-----SVKGILINIFGGIMRCDVLV---KGILSAVKEVK--- 350
              + +     K I           +G ++ I GG      +    KGI+ A+KE K   
Sbjct: 353 APTEGQTYEYAKTIIDLMTRGIPHPEGKVLIIGGGAANFSDVAATFKGIIRALKEYKEGL 412

Query: 351 --INIPLVMRLEGANVDIGNRLIAESG 375
              N+ + +R  G N   G + +   G
Sbjct: 413 VRHNVKIWVRRAGPNYQEGLKAMRLCG 439


>gi|58260100|ref|XP_567460.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116646|ref|XP_772995.1| hypothetical protein CNBJ2710 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255615|gb|EAL18348.1| hypothetical protein CNBJ2710 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229510|gb|AAW45943.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1149

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 85/447 (19%), Positives = 153/447 (34%), Gaps = 87/447 (19%)

Query: 3   IHEYQAKAL----LRKYNVPVA-----KGVVISSVH-AAESAIKTL--------PGPLYV 44
           I EY AK L    L +   P+          +       + A K L          P +V
Sbjct: 6   IREYDAKQLVSYWLNRSPTPIPCKTDTSFTAVQVAQVQWDPATKQLSPPIKPGQGLPDWV 65

Query: 45  VKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
             S++     GK           G + +    +   + I E  G  +  ++T      +N
Sbjct: 66  FSSKLV----GKPDQLIKRRGKAGLLCLNKGWEETGAWIEEKAGKPVTVEKTTG---TLN 118

Query: 105 CVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
              +E         E Y+ +   R    + F  + +GG+D+ +V      K  KLLI   
Sbjct: 119 TFIIEPFCPHPAETEYYVCINSAREGDWILF--THEGGVDVGDVDA----KALKLLIAVG 172

Query: 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGR-- 218
               + +      +  +    +    D    LY  + D   + LEINPL+ +   +G+  
Sbjct: 173 EEFPTRETIISTLLANVAPAKQDVLCDFLIRLYGVYVDLHFAYLEINPLVCLDAVDGKPA 232

Query: 219 -LRVLDSKISFDDNALYRHLDIQEL-----------------------------RDVSEE 248
            ++ LD     D  A +    +  +                             RD+++E
Sbjct: 233 EIQYLDMAAKLDQTADFLCGPMWAVARDVSSTTTGATGIKADRGPAMVWPAPFGRDLTKE 292

Query: 249 DSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGG 301
           ++   +          L+ +  +G +  MV G G ++   D I   G A   AN+ +  G
Sbjct: 293 EAYIQKLDASTGASLKLTVLNSEGRVWTMVAGGGASVVYSDAIAAAGFAHELANYGEYSG 352

Query: 302 GADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRCDVLV---KGILSAVKEVK--- 350
              + +     K I           +G ++ I GG      +    KGI+ A+KE K   
Sbjct: 353 APTEGQTYEYAKTIVDLMTRGTPHPEGKVLIIGGGAANFSDVAATFKGIIRALKEYKEGL 412

Query: 351 --INIPLVMRLEGANVDIGNRLIAESG 375
              ++ + +R  G N   G + +   G
Sbjct: 413 VRHSVKIWVRRAGPNYQEGLKAMRLCG 439


>gi|169772623|ref|XP_001820780.1| ATP-citrate synthase subunit 2 [Aspergillus oryzae RIB40]
 gi|238490538|ref|XP_002376506.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus flavus
           NRRL3357]
 gi|83768641|dbj|BAE58778.1| unnamed protein product [Aspergillus oryzae]
 gi|220696919|gb|EED53260.1| ATP citrate lyase subunit (Acl), putatibe [Aspergillus flavus
           NRRL3357]
          Length = 484

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 75/419 (17%), Positives = 129/419 (30%), Gaps = 84/419 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE     L   G  +V K       RGK     L            +       I   
Sbjct: 58  DQAEVTYPWLLASGAKFVAKPDQLIKRRGKSGLLALNK----------TWAEAREWIEAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
               +   Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AAKDV---QVETVTGVLRQFLVEPFVPHPQETEYYINIHSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A+L     +         D    LY  + D   +
Sbjct: 163 DVDAKAEKLLIPVNLK-NYPSNEEIAATLLKK--VPSGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNG-----RLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNADATSAEVHFLDLAAKLDQTAEFECGTKWAIARSPANLGIAVAPQEGK 279

Query: 243 ----------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMA 281
                           R++S+E+    E          L+ +   G +  +V G G ++ 
Sbjct: 280 VNIDAGPPMEFPAPFGREMSKEEKFIAELDAKTGASLKLTVLNPKGRVWTLVAGGGASVV 339

Query: 282 TMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIMR 334
             D I   G     AN+ +  G   + +       +            G ++ I GGI  
Sbjct: 340 YADAIASAGFVSELANYGEYSGAPTETQTYNYAHTVLDLMLRAPIHPDGKVLFIGGGIAN 399

Query: 335 CDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIA----ESGLNVITA 381
              +    KG++ A++EV     +  + + +R  G N   G R I     E GLN+   
Sbjct: 400 FTNVASTFKGVIRALREVAPVLNEHKVQIWVRRAGPNYQEGLRNIKSVGEELGLNMHVY 458


>gi|73293887|gb|AAZ74669.1| ATP citrate lyase beta subunit [Thioreductor micantisoli BKB25Ts-Y]
          Length = 299

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 45/307 (14%)

Query: 90  TLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA 147
           TL++ QTG    R+    VE        +E Y+S              S +GGM++EE  
Sbjct: 5   TLLSGQTG----RLTHFIVEPFTPHTQEQEYYISATTVGEDD--VLYLSAEGGMEVEENW 58

Query: 148 KDYPQKIFKLLIDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMS 204
               +    + ID    +   D+           +      +        YK + D + +
Sbjct: 59  DKVNE--IHIPID----LNDNDIEKAIKADIPAGITADKVEEFAAFAFAFYKFYRDLNFA 112

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD---------IQELRDVSEEDSREIEA 255
            LEINP++++ N ++ +LD     DD A +   D            + D S E+     A
Sbjct: 113 YLEINPIVMLDNNKMAILDLVARLDDTAGFLMADKWGDIEYPTAFGMEDKSPEEEAIALA 172

Query: 256 KQHNLSYIALD-----GNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA-DQDK 307
              + + + L      G I  MV G G ++   D I  + G    AN+ +  GG    + 
Sbjct: 173 DSKSGASLKLTILNPMGRIWTMVAGGGASVVYADTIADFAGVKDLANYGEYSGGPTTAET 232

Query: 308 VAAA---FKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLV 356
              A   F ++T     +G ++ I G I     + K   GI++A ++      +    + 
Sbjct: 233 EFYADTIFDLMTRHQDPRGKILIIGGAIANFTDIAKTFTGIINAFEKYADKLKENKTKIY 292

Query: 357 MRLEGAN 363
           +R  G N
Sbjct: 293 VRRGGPN 299


>gi|258572702|ref|XP_002545113.1| hypothetical protein UREG_04630 [Uncinocarpus reesii 1704]
 gi|237905383|gb|EEP79784.1| hypothetical protein UREG_04630 [Uncinocarpus reesii 1704]
          Length = 486

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 74/414 (17%), Positives = 130/414 (31%), Gaps = 81/414 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L   G  +V K       RGK     L            + +     I   
Sbjct: 58  DQAESTHPWLLAKGAKFVAKPDQLIKRRGKSGLLALNK----------TWEEAREWIAAR 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QQVETVVGALRHFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  + L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLVPVNLKHYPSNQ-EIASKLLSKI--PQGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQELR------- 243
            LEINPL+++ N       +  LD     D  A +         R      +R       
Sbjct: 220 YLEINPLVVIPNADKTSADVHFLDLAAKLDQTAEFECGTKWAVARSPAALGIRAAARADD 279

Query: 244 --------------------DVSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAM 280
                                  E+   +++AK      L+ +   G I  +V G G ++
Sbjct: 280 KVTVDAGPPMDFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNASGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +     G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPMHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESGLNVI 379
               +    KG++ A++EV     +    + +R  G N   G + I   G  + 
Sbjct: 400 NFTNVATTFKGVIRALREVAPVLNEHKTQIWVRRAGPNYQEGLKNIKAVGEELH 453


>gi|320586906|gb|EFW99569.1| ATP citrate lyase subunit putatibe [Grosmannia clavigera kw1407]
          Length = 489

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 78/418 (18%), Positives = 140/418 (33%), Gaps = 88/418 (21%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE     L      +V K       RGK     L  +               SD R  
Sbjct: 58  DQAEVTYPWLLQSSAKFVAKPDQLIKRRGKSGLLALNKNW--------------SDARAW 103

Query: 87  LGSTLITKQTGPTGSRV-NCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDI 143
           +       Q       V     VE         E Y+++   R    + F  + +GG+D+
Sbjct: 104 IAVLAGKVQKVENTHGVLRHFLVEPFVPHQQNEEYYININSVRDGDWILF--THEGGVDV 161

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDM 203
            +V     + +  + +D     ++E++AS      +         D    LY  + D   
Sbjct: 162 GDVDAKAEKLL--IPVDLSDYPSNEEIASTLLK-NIPEGLHSVLVDFITRLYAVYVDCQF 218

Query: 204 SLLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL------- 242
           + LEINPL+++ N       +  LD     D  A +         R      L       
Sbjct: 219 TYLEINPLVVVPNEDATSAAVHFLDLAAKLDQTADFECGVKWAIARSPAALGLTNIATQS 278

Query: 243 -------------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGL 278
                              R++++E++   E          L+ +  +G I  +V G G 
Sbjct: 279 GGAVNIDAGPPMEFPAPFGRELTKEEAYIAELDAKTGASLKLTVLNANGRIWTLVAGGGA 338

Query: 279 AMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGG 331
           ++   D I   G     AN+ +  G   + +     + +      +  + KG ++ I GG
Sbjct: 339 SVVYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPMNDKGKVLFIGGG 398

Query: 332 IMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
           I     +    KG++ A+++      + N+ + +R  G N   G + +     E GLN
Sbjct: 399 IANFTNVASTFKGVIKALRDYAKALNEHNVQIWVRRAGPNYQEGLKNMKAATEELGLN 456


>gi|169607549|ref|XP_001797194.1| hypothetical protein SNOG_06833 [Phaeosphaeria nodorum SN15]
 gi|111064364|gb|EAT85484.1| hypothetical protein SNOG_06833 [Phaeosphaeria nodorum SN15]
          Length = 488

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 73/415 (17%), Positives = 135/415 (32%), Gaps = 83/415 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L  +                 I E 
Sbjct: 58  DQAEATYPWLLTPGAKFVAKPDQLIKRRGKSGLLALNKEW----------AEAKEWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKPQKVETVDG---VLRQFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V +   + +  + +D     ++E +AS     ++         D    LY  + D   +
Sbjct: 163 DVDEKAEKLL--IPVDLKEYPSNEQIASTLLS-KVPKGVHNVLVDFISRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNADATSAEVHFLDLAAKLDQTAEFECGAKWAIARSATALGTPLALAKDA 279

Query: 243 -----------------RDVSEEDSREIEAKQH-----NLSYIALDGNIGCMVNGAGLAM 280
                            R++S+E++   E          L+ +   G +  +V G G ++
Sbjct: 280 KTNIDVGPPMEFPAPFGREMSKEEAYIAEMDAKTGASLKLTILNATGRVWTLVAGGGASV 339

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDSSVKGIL-----INIFGG-- 331
              D I   G A   AN+ +  G   + +     + +    + +        +   GG  
Sbjct: 340 VYADAIASAGFASELANYGEYSGAPTETQTFHYARTVPRPHAPRSSARGGQRVLFIGGVV 399

Query: 332 ---IMRCDVLVKGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
                      KG++ A++E     V+ N+ + +R  G N   G + I   G  +
Sbjct: 400 LANFTNVASTFKGVIRALREVAPLLVEHNVQIWIRRAGPNYQEGLKNIKNVGQEL 454


>gi|296416285|ref|XP_002837811.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633694|emb|CAZ82002.1| unnamed protein product [Tuber melanosporum]
          Length = 485

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 75/413 (18%), Positives = 139/413 (33%), Gaps = 81/413 (19%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
            AAE     L   G  +V K       RGK     L  +               + I+E 
Sbjct: 57  DAAEQQYPWLLEQGAKFVAKPDQLIKRRGKAGLLALNKNW----------ADARAWIQER 106

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            GS +  +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 107 AGSEVQVEVVKG---YLRTFLVEPFCPHKPEEEYYINIHSVREGDWILF--THEGGVDVG 161

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +D     ++E +AS     ++         D    LY  + D   +
Sbjct: 162 DVDAKAEKLL--IPVDLKQYPSNETIASTLLK-KVPSGVHNVLVDFITRLYAVYVDCQFT 218

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 219 YLEINPLVVIPNEDKTSAEVHFLDLAAKLDQTAEFECGAKWAVARSPIALGLRPVAGNST 278

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAM 280
                            R++S+E++   E      + + L      G +  +V G G ++
Sbjct: 279 TVSIDAGPPMEFPAPFGRELSKEEAYIAELDAKTGASLKLTVLNPVGRVWTLVAGGGASV 338

Query: 281 ATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIM 333
              D I   G A   AN+ +  G   + +     + +            G ++ I GGI 
Sbjct: 339 VYADAIASSGFASELANYGEYSGAPTEGQTYLYARTVFDLMLRAPIHPDGRVLFIGGGIA 398

Query: 334 RCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
               +    KG++ A++E     ++  + + +R  G N   G + I   G  +
Sbjct: 399 NFTNVASTFKGVIRALREFAPVFIEHKVQIWVRRAGPNYQEGLKNIKNVGQEL 451


>gi|83588808|gb|ABC25000.1| ATP-specific succinyl-CoA synthetase beta subunit [Bos taurus]
          Length = 141

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++HEY +  LL++  V V KG V  S   A +  K L     V+K+Q+ AGGRGKG F+
Sbjct: 53  LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFE 112

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLI 92
              +  KGGV++  S +   +   +++G  L 
Sbjct: 113 ---SGLKGGVKIVFSPEEAKAVSSQMIGKKLF 141


>gi|154721400|gb|ABS84822.1| ATP citrate lyase [Toxoplasma gondii]
          Length = 1281

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 75/443 (16%), Positives = 138/443 (31%), Gaps = 101/443 (22%)

Query: 19  VAKGVV-----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           V +GV       + +    +    L      VK  +    RGK             V+++
Sbjct: 54  VLRGVCVAVNSATDLTELPNDHPWLLTSRLTVKPDVLLKRRGKSGL----------VKLD 103

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---ELYLSLLVDRTSGM 130
            S      ++R ++G+   T+  G TG  ++   VE          E Y+++   R    
Sbjct: 104 LSWPEAQKELRALMGTQFTTQ--GLTG-TLDHFIVEPFFPHDEATNEFYVAIRTLREGDE 160

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLELQGQARIDGG 188
           V F  S +GG+D+  V +   + +  +  D      +    +  + D    +G A     
Sbjct: 161 VLF--SPRGGVDVGNVDEHARRVLIPIACDEARASQAAGAKTNGMADASASEGDATKGAR 218

Query: 189 D----------------------------------------------LFPNLYKAFCDKD 202
                                                              LY+ FC+  
Sbjct: 219 KACTQPLALEATRKYGIECRLTQEELEALVAPLVTDVATDAKKAMPAFLAQLYRQFCEMH 278

Query: 203 MSLLEINPLIIM-KNGRLRVLDSKISFDDNALYRHLDIQEL--------RDVSEEDSREI 253
            + LEINP           +LD     D  A +                R  +EE+    
Sbjct: 279 FAFLEINPFCFDAATQTFVILDCAAKLDHTAEFLCDKKWGHVSFPSPFGRRFTEEERYIR 338

Query: 254 E-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQD 306
           E          L+ +   G I  ++ G G ++   D +    +G    N+ +  G   + 
Sbjct: 339 ELDSKTGASLKLTVLNPKGRIWTLIAGGGASVVYADTVCDLGFGDELCNYGEYSGAPSEV 398

Query: 307 KVAAAFKIITSDSSV------KGILINIFGGIMRCDVLVK---GILSAVKEV-----KIN 352
                 K I    +       +G ++ I GGI     +     G++ A++E      +  
Sbjct: 399 TTYEYTKTILGLMTAPGSYREEGKILLIGGGIASFTNVADTFRGVIRALREFREQLREFK 458

Query: 353 IPLVMRLEGANVDIGNRLIAESG 375
           + + +R  G N   G + + E G
Sbjct: 459 VRIYVRRGGPNYQEGLKRMREVG 481


>gi|295664927|ref|XP_002793015.1| ATP-citrate-lyase [Paracoccidioides brasiliensis Pb01]
 gi|226278536|gb|EEH34102.1| ATP-citrate-lyase [Paracoccidioides brasiliensis Pb01]
          Length = 486

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 133/410 (32%), Gaps = 81/410 (19%)

Query: 29  HAAESAIKTLPGPL--YVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDIRLVAKPDQLIKRRGKSGLLALDR----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +        +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFVPHPQETEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + ++     +++++AS   + ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVNLANYPSNDEIAS-ALLSKIPSGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNPSKTSAAVHFLDLAAKLDQTAEFECGTKWAIARSPAALGIRKATNTDG 279

Query: 243 -----------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAM 280
                            R++S+E+    +      S + L     +G I  +V G G ++
Sbjct: 280 KVTIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGSSLKLTVLNPNGRIWTLVAGGGASV 339

Query: 281 ATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + I            G ++ I GGI 
Sbjct: 340 VYADAIASAGFVSELANYGEYSGAPTETQTFNYARTILDLMLRAPLHPDGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAESG 375
               +    KG++ A++EV     +    + +R  G N   G + I   G
Sbjct: 400 NFTNVASTFKGVIRALREVAPILNEHKTQIWVRRAGPNYQEGLKNIKAVG 449


>gi|167465542|ref|ZP_02330631.1| succinyl-CoA synthetase, beta subunit [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 80

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/80 (57%), Positives = 64/80 (80%)

Query: 317 SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           SD  VKG+ INIFGGIMRCDV+ KG+++AVKE+ ++ PLV+RLEG NV++G +++ ESGL
Sbjct: 1   SDEKVKGVFINIFGGIMRCDVIAKGVVAAVKELGLDRPLVVRLEGTNVELGQQILNESGL 60

Query: 377 NVITAIDLDDAAQKIVHAVK 396
           N++ A  + D AQKIV  V+
Sbjct: 61  NIVAADSMADGAQKIVSLVQ 80


>gi|19114158|ref|NP_593246.1| ATP-citrate synthase subunit 2 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74581921|sp|O13907|ACL2_SCHPO RecName: Full=Probable ATP-citrate synthase subunit 2; AltName:
           Full=ATP-citrate (pro-S-)-lyase 2; AltName: Full=Citrate
           cleavage enzyme subunit 2
 gi|2414609|emb|CAB16586.1| ATP-citrate synthase subunit 2 (predicted) [Schizosaccharomyces
           pombe]
          Length = 492

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 69/409 (16%), Positives = 128/409 (31%), Gaps = 81/409 (19%)

Query: 31  AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGST 90
            E     +     V K       RGK    +L A          +       IRE  G  
Sbjct: 71  VEQEHPWVKETKLVAKPDQLIKRRGKSGLLKLNA----------TWDEAKEWIRERAGK- 119

Query: 91  LITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAK 148
              ++       +    VE         E Y+++   R    + F    +GG+D+ +V  
Sbjct: 120 --NQKVQHAVGYLTTFLVEPFVPHPPNTEYYININSVREGDWILF--CNEGGVDVGDVDA 175

Query: 149 DYPQKIFKLLIDPLIGVTSEDVASLCDML--ELQGQARIDGGDLFPNLYKAFCDKDMSLL 206
              + +  + +           A++   L  ++  +      D    LY  + D   + L
Sbjct: 176 KARKLLVPVRLSEFPS-----RATIASTLLSDIPVEQHESLVDFIIRLYSVYVDCQFTYL 230

Query: 207 EINPLIIMKNGR---LRVLDSKISFDDNALY---------RHLDIQELRDVSEE------ 248
           EINPL+++   +   +  LD     D  A +         R  +   ++   EE      
Sbjct: 231 EINPLVVIPTAKGADVFYLDLAAKLDQTAEFECGAKWAVARAPESLGIKTSGEESGAINA 290

Query: 249 --DSREIEAKQHN----------------------LSYIALDGNIGCMVNGAGLAMATMD 284
                 +                            L+ +  +G +  +V G G ++   D
Sbjct: 291 DHGPPMVFPAPFGRELSKEEAYVQGLDAKTGASLKLTILNAEGRVWNLVAGGGASVVYAD 350

Query: 285 IIKLYGG--APANFLDVGGGADQDKVAAAFKIITS-----DSSVKGILINIFGGIMRC-- 335
            + + G     AN+ +  G     +     K +       +    G ++ I GGI     
Sbjct: 351 AVAVNGAADELANYGEYSGAPTDGQTYEYAKTVLDLMTRGEPRADGKVLFIGGGIANFTS 410

Query: 336 -DVLVKGILSAVKEVK-----INIPLVMRLEGANVDIGNRLIAESGLNV 378
             V  + I  A+ + K       + + +R  G N   G R+I E+G   
Sbjct: 411 PAVTFRAIARALGDYKDKLHAHKVSIWVRRAGPNYQEGLRVIREAGKKF 459


>gi|220922716|ref|YP_002498018.1| ATP-grasp domain-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219947323|gb|ACL57715.1| ATP-grasp domain protein [Methylobacterium nodulans ORS 2060]
          Length = 431

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 61/316 (19%), Positives = 118/316 (37%), Gaps = 26/316 (8%)

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
            + + +RE      +  + G   ++ N V  E       E+Y S+             + 
Sbjct: 67  DLGTALREKERLYFVEHRHGNALAKANGVTFEGAVPAEHEVYFSITDSTRFRAPTMTLTH 126

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA 197
           +GG+DIEE+ +    ++ ++  DPL G+ +  VA+    L              P L++ 
Sbjct: 127 RGGVDIEELDRS---EVAQVPFDPLTGLKAFVVANALSELNAPKALISPLVQQLPKLWEL 183

Query: 198 FCDKDMSLLEINPLIIMKN--GRL--RVLDSKISFD-DNALYRHLDIQ------ELRD-V 245
           +    M+ +E+NP+ +  +  GRL     D K  FD D+  ++ L +       +  D  
Sbjct: 184 YHGFGMTTVELNPIRMRPDRTGRLTPVACDFKCGFDRDDPRWQRLGLPGHLFSVDYSDFE 243

Query: 246 SEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ 305
           +E +       Q ++  I   G I     G G   A   + ++ G       D GG    
Sbjct: 244 AEINGLRTYQGQSDVCVINPAGTILAPTFGGG---ANSLVTEMLGDDAIISSDFGGNPPY 300

Query: 306 DKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVM 357
            K+    +I       +  ++ I GG      + +    +  A++E         + +V 
Sbjct: 301 AKMKEVARICFKHWLKQANVLFIIGGKSNNTDIFETFRAMADALREHVGRHGPTPLYIVA 360

Query: 358 RLEGANVDIGNRLIAE 373
              G N+  G   + +
Sbjct: 361 GRGGPNLVRGMGALRD 376


>gi|115693479|ref|XP_001191770.1| PREDICTED: similar to ATP citrate lyase, partial
           [Strongylocentrotus purpuratus]
 gi|115738618|ref|XP_001189521.1| PREDICTED: similar to ATP citrate lyase, partial
           [Strongylocentrotus purpuratus]
          Length = 273

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 29/219 (13%)

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL-DIQEL--- 242
                 +LY+ F D   + LEINPL++    ++ VLD     D  A Y       +L   
Sbjct: 2   VAGFVLDLYQRFRDLYFTYLEINPLVVTD--KVYVLDLAAKIDATAEYLCKVQWGDLEFP 59

Query: 243 ----RDVSEEDSREIEAKQHNLSYIALD-----GNIGCMVNGAGLAMATMDIIKLYGGAP 293
               R+   E++   +    + + + L      G I  MV G G ++   D I   GGA 
Sbjct: 60  PPFGREAFPEEAYIADLDAKSGASLKLTILNPVGRIWTMVAGGGASVIYSDTICDLGGAA 119

Query: 294 --ANFLDVGGGADQDKVAAAFKIIT----SDSSVKGILINIFGGIMRCDVLV---KGILS 344
             AN+ +  G   + +     K I      +    G ++ I GGI     +    KGI+ 
Sbjct: 120 ELANYGEYSGAPSEGQTYEYAKTILGLMTREQHPDGKVLIIGGGIANFTNVASTFKGIVK 179

Query: 345 AVKE-----VKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           A+K+     ++  + + +R  G N   G R++ E G N+
Sbjct: 180 ALKQFREKLIEFRVSIYVRRGGPNYQEGLRVMRELGGNL 218


>gi|215410541|ref|ZP_03419349.1| succinyl-CoA synthetase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
          Length = 106

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV--KIN 352
           NFLD+GGGA  + +AA   ++  D  VK + +N+FGGI  CD +  GI+ A+  +  + N
Sbjct: 1   NFLDIGGGASAEVMAAGLDVVLGDQQVKSVFVNVFGGITSCDAVATGIVKALGMLGDEAN 60

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVIT-AIDLDDAAQKIVHAV 395
            PLV+RL+G NV+ G R++ E+   ++T    +D+AA K     
Sbjct: 61  KPLVVRLDGNNVEEGRRILTEANHPLVTLVATMDEAADKAAELA 104


>gi|73294041|gb|AAZ74672.1| ATP citrate lyase beta subunit [Lebetimonas acidiphila]
          Length = 303

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 113/307 (36%), Gaps = 42/307 (13%)

Query: 90  TLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA 147
           TL++ Q G    R+    VE         E Y++      +       S  GGM++EE  
Sbjct: 6   TLLSGQKG----RLTHFIVEPFTPHTEDEEYYIAATT-LDAYHDVLYLSAHGGMEVEENW 60

Query: 148 KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLE 207
               +   K+ ID +     E +       ++  + +          YK   D + + LE
Sbjct: 61  DKVTE--IKIPID-MDEANLEHLIRANIPADIPEENKERFVTFAEQFYKFSRDLNFAYLE 117

Query: 208 INPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQH 258
           INPL++  N  + +LD     DD A +   D            + + S E+    EA   
Sbjct: 118 INPLVLQGN-NIYILDLVARLDDTAGFLMKDKWGNIEFPTPFGMPEKSPEEKAIAEADAK 176

Query: 259 NLSYIALD-----GNIGCMVNGAGLAMATMDIIK-LYGG--APANFLDVGGGADQDKVAA 310
           + + + L      G I  +V G G ++   D I  L GG    AN+ +  GG   D+   
Sbjct: 177 SGASLKLTILNPMGRIWTLVAGGGASVVYADTIADLAGGVNELANYGEYSGGPTTDETRF 236

Query: 311 AFKIIT------SDSSVKGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLV 356
             + +        D   +  ++ I G I     + K   GI+ A      K   + + + 
Sbjct: 237 YTETVLDLMTREKDPQGRDKILIIGGAIANFTDVAKTFTGIIQAFNKYADKMKDVGVRIY 296

Query: 357 MRLEGAN 363
           +R  G N
Sbjct: 297 VRRGGPN 303


>gi|116205083|ref|XP_001228352.1| hypothetical protein CHGG_10425 [Chaetomium globosum CBS 148.51]
 gi|88176553|gb|EAQ84021.1| hypothetical protein CHGG_10425 [Chaetomium globosum CBS 148.51]
          Length = 482

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 75/416 (18%), Positives = 140/416 (33%), Gaps = 91/416 (21%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE     L   G  +V K       RGK     L            +     + + E 
Sbjct: 58  DQAEITYPWLLHQGAKFVAKPDQLIKRRGKSGLLALNK----------TWPEAKAWVAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     + T      +    VE         E Y++            + + +GG+D+ 
Sbjct: 108 AGKVQKVEHTEG---VLRQFLVEPFVPHPDGTEYYINGDW--------ILFTHEGGVDVG 156

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +D     ++E++AS     ++         D    LY  + D   +
Sbjct: 157 DVDAKAEKLL--IPVDLTQYPSNEEIASTLLS-KVPKGVHNVLVDFITRLYAVYVDCQFT 213

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      +        
Sbjct: 214 YLEINPLVVIPNEDATSASVHFLDLAAKLDQTADFECGVKWAIARSPAALGITAPTSSNG 273

Query: 243 -----------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAM 280
                            R++++E++   E          L+ +  +G I  +V G G ++
Sbjct: 274 TVNIDAGPPIEFPAPFGRELTKEEAYIAELDAKTGASLKLTVLNPNGRIWTLVAGGGASV 333

Query: 281 ATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      +  + KG ++ I GGI 
Sbjct: 334 VYADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPMNSKGKVLFIGGGIA 393

Query: 334 RCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
               +    KG++ A++E      + N+ + +R  G N   G + +     E GLN
Sbjct: 394 NFTNVASTFKGVIKALREYANTLNEHNVQIWVRRAGPNYQEGLKNMKAATQELGLN 449


>gi|270643364|ref|ZP_06222156.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
 gi|270317286|gb|EFA28848.1| succinyl-CoA synthetase beta chain [Haemophilus influenzae HK1212]
          Length = 103

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/101 (55%), Positives = 80/101 (79%)

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLV 356
           LDVGGGA Q++VA AFKII +D SVK IL+NIFGGI+RCD++ +G+++AV EV + +P+V
Sbjct: 1   LDVGGGATQERVAEAFKIILTDPSVKVILVNIFGGIVRCDLIAEGVIAAVNEVGVRVPVV 60

Query: 357 MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           +RLEG N +IG +++ ES +N++TA  L  AA+  V+A KG
Sbjct: 61  VRLEGTNAEIGRQILVESDVNILTAQSLQQAAELAVNAAKG 101


>gi|23491645|dbj|BAC16793.1| putative succinyl-CoA synthetase beta subunit N-terminal domain
          [Acidithiobacillus thiooxidans]
          Length = 86

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 10/96 (10%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          MN+HEYQAK LL +  +PV + +   SV  A +  + L GP +VVK+Q+HAGGRGK    
Sbjct: 1  MNLHEYQAKRLLAEEGIPVPRAIPAFSVREAVNQARELGGPAWVVKAQVHAGGRGKA--- 57

Query: 61 ELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
                 GGVRV  S+  V    +E+LG  L+T QT
Sbjct: 58 -------GGVRVVHSIAGVEKAAQELLGKPLVTAQT 86


>gi|215512095|gb|ACJ68034.1| ATP citrate lyase beta subunit [Caminibacter profundus]
          Length = 300

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 37/295 (12%)

Query: 90  TLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVA 147
           TL++ Q G    R+    VE         E Y++      +       S  GGM++EE  
Sbjct: 15  TLLSGQKG----RLTHFIVEPFTPHTEDEEYYIAATT-LDAYHDVLYLSAHGGMEVEENW 69

Query: 148 KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLE 207
               +   K+ ID +     E +       ++  + +          YK F D + + LE
Sbjct: 70  DKVTE--IKIPID-MDEANLEHLIRANIPADIPEENKERFVTFAEQFYKFFRDLNFAYLE 126

Query: 208 INPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQH 258
           INPL++  N  + +LD     DD A +   D            + + S E+    EA   
Sbjct: 127 INPLVLQGN-NIYILDLVARLDDTAGFLMKDKWGNIEFPTPFGMPEKSPEEKAIAEADAK 185

Query: 259 NLSYIALD-----GNIGCMVNGAGLAMATMDIIK-LYGG--APANFLDVGGGADQDKVAA 310
           + + + L      G I  +V G G ++   D I  L GG    AN+ +  GG   D+   
Sbjct: 186 SGASLKLTILNPMGRIWTLVAGGGASVVYADTIADLAGGVNELANYGEYSGGPTTDETRF 245

Query: 311 AFKIIT------SDSSVKGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV 356
             + +        D   +  ++ I G I     + K   GI+ A  +    +  V
Sbjct: 246 YTETVLDLMTREKDPQGRDKILIIGGAIANFTDVAKTFTGIIQAFNKYADKMKDV 300


>gi|242216681|ref|XP_002474146.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726691|gb|EED80632.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1153

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 92/468 (19%), Positives = 141/468 (30%), Gaps = 113/468 (24%)

Query: 3   IHEYQAKALLR-----------------KYNVPVAK-GVVISSVH-AAESAIKTLPGPLY 43
           I EY AK LL                  K+  P  K   V       A +A   LP  ++
Sbjct: 6   IREYDAKLLLAYWLERAPSVDPSAQLATKFVFPSPKVAQVAWDPETNAITADTQLPSWVF 65

Query: 44  ----VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
               V K       RGK     L            +       I+   G     +     
Sbjct: 66  TTKLVAKPDQLIKRRGKAGLLALNK----------TWDEAREWIQARAGKPQRVESVVG- 114

Query: 100 GSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
              +N   VE         E Y+ +   R    + F  + +GG+DI +V      K  KL
Sbjct: 115 --TLNNFIVEPFLPHPSNTEYYVCINSAREGDAILF--THEGGVDIGDVDA----KALKL 166

Query: 158 LIDPLIGVTSEDVASLCDML--ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            I       S  V  + D L   +    +    D    LY  + D   + LEINPLI + 
Sbjct: 167 EIPVNAPFPSRQV--IADTLLKHVTAAKKDTLVDFLIRLYSVYVDLHFAYLEINPLICLD 224

Query: 216 NGR-----LRVLDSKISFDDNALYRHLDIQEL---------------------------- 242
                   +  LD     D  A         +                            
Sbjct: 225 AADGGQPTIFYLDMAAKLDQTAESICGPKWAIARDLSIYESGSQATTSKGKSVSADRGPP 284

Query: 243 --------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
                   RD+++E++   +          L+ +  +G I  MV G G ++   D I  +
Sbjct: 285 MVWPAPFGRDLTKEEAYIQKLDASTGASLKLTVLNPEGRIWTMVAGGGASVVYADAIAAH 344

Query: 290 G--GAPANFLDVGGGADQDKVAAAFKIIT--------SDSSVKGILINIFGGIMRCDVLV 339
           G     AN+ +  G   + +     K I                I+              
Sbjct: 345 GFADELANYGEYSGAPTEGQTYEYAKTIIDLITRGKPRSDGKILIIGGGIANFTNVAATF 404

Query: 340 KGILSAVKEVK-----INIPLVMRLEGANVDIGNR---LIAES-GLNV 378
           KGI+ A+KE K       + + +R  G N   G +   L+ ES G+ +
Sbjct: 405 KGIIRALKEYKSPLIAHKVQIYVRRGGPNYQEGLKAMRLLGESLGVPI 452


>gi|170102777|ref|XP_001882604.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642501|gb|EDR06757.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1157

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 80/468 (17%), Positives = 135/468 (28%), Gaps = 114/468 (24%)

Query: 3   IHEYQAKALLR-----------KYNVPV----AKGVVI--------SSVHAAESAIKTLP 39
           I EY AK LL               V          V          S+         + 
Sbjct: 6   IREYDAKLLLAYWLERAPPIAPHAQVKTKFVYPTAKVAQIAWDPATDSITPDTQLPSWVF 65

Query: 40  GPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
               V K       RGK     L            +       I +  G     +     
Sbjct: 66  TSKLVAKPDQLIKRRGKAGLLALNK----------TWDEAKPWIAQRAGKPQKVESITG- 114

Query: 100 GSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
              +N   VE         E Y+ +   R    + F  + +GG+DI +V       +  L
Sbjct: 115 --TLNNFIVEPFLPHPSHTEYYVCITSGREGDSILF--THEGGVDIGDVDAKA--LVLNL 168

Query: 158 LIDPLIGVTSEDVASLCD---MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            +     +       +     +  +  + +    D    LY  + D   + LEINPL+++
Sbjct: 169 PV-----IQPFPTRDVIASTLLTHVPAEKKDTLVDFLIRLYSVYVDLHFAYLEINPLVVL 223

Query: 215 K-----NGRLRVLDSKISFDDNALYRHLDIQEL--------------------------- 242
                    +  LD     D  A         +                           
Sbjct: 224 DAKDGGEPEVAYLDMAAKLDQTAESICGPKWAIARDLSVYNQTATTSTTGGKVSADRGPP 283

Query: 243 --------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
                   RD+++E++   +          L+ +  +G I  MV G G ++   D I  +
Sbjct: 284 MVWPAPFGRDLTKEEAYIQKLDGSTGASLKLTVLNAEGRIWTMVAGGGASVVYSDAIAAH 343

Query: 290 GGAP--ANFLDVGGGADQDKVAAAFKIIT--------SDSSVKGILINIFGGIMRCDVLV 339
           G A   AN+ +  G   + +     K I                I+              
Sbjct: 344 GFAHELANYGEYSGAPTEGQTYEYAKTIIDLITRGTPHPEGKILIIGGGIANFTNVAATF 403

Query: 340 KGILSAVKEVK-----INIPLVMRLEGANVDIGNR---LIAES-GLNV 378
           KGI+ A+KE K      ++ + +R  G N   G +   L+ ES G+ +
Sbjct: 404 KGIIRALKEYKSQLIAHSVKIFVRRGGPNYQEGLKAMRLLGESLGVPI 451


>gi|302678201|ref|XP_003028783.1| hypothetical protein SCHCODRAFT_78811 [Schizophyllum commune H4-8]
 gi|300102472|gb|EFI93880.1| hypothetical protein SCHCODRAFT_78811 [Schizophyllum commune H4-8]
          Length = 1170

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 74/409 (18%), Positives = 120/409 (29%), Gaps = 86/409 (21%)

Query: 40  GPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
               V K  +    RGK     L             +   I  I E  G     K    T
Sbjct: 71  TSKLVAKPDMLIKRRGKAGLLSLNKG----------IDESIQWINERAGKP--CKVESTT 118

Query: 100 GSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
           G   N   +E         E Y+ +   R +  + F  + +GG+DI +       K+   
Sbjct: 119 GLLTN-FIIEPFLPHPSENEFYVCITSGRDADTILF--THEGGVDIGDADAKS-LKLDIP 174

Query: 158 LIDPLIGVTSEDVASLCDMLELQGQARID---GGDLFPNLYKAFCDKDMSLLEINPLIIM 214
           ++                   L   A        D    LY  + D   + LEINPL+++
Sbjct: 175 VLAVGEYGQPFPTREEIQKTLLPNVAADKKDVLTDFVLRLYAVYVDLHFAYLEINPLVVL 234

Query: 215 K------NGRLRVLDSKISFDDNALYRHLDIQEL-RDVS-----------------EEDS 250
                     +  LD+    D  A         + RD S                 +   
Sbjct: 235 DPKEPGGTPTVHFLDTAAKLDQTAESIVGQKWAIARDESVILGQESKPVVGGKVQADRGP 294

Query: 251 REIEAKQHN----------------------LSYIALDGNIGCMVNGAGLAMATMDIIKL 288
             +                            L+ +  +G +  MV G G ++   D I  
Sbjct: 295 PMVFPAPFGRQLTKEEAYIQKLDASTGASLKLTVLNAEGRVWTMVAGGGASVVYSDAIAA 354

Query: 289 YGGAP--ANFLDVGGGADQDKVAAAFKIIT--------SDSSVKGILINIFGGIMRCDVL 338
           +G A   AN+ +  G   + +     K I          +     I+             
Sbjct: 355 HGFAHELANYGEYSGAPSEGQTYEYAKTILDLMTRGTPREDGKILIIGGGIANFTNVAAT 414

Query: 339 VKGILSAVKEVK-----INIPLVMRLEGANVDIGNR---LIAES-GLNV 378
            KGI+ A+KE K       + + +R  G N   G +   L+ ES G+ +
Sbjct: 415 FKGIIRALKEFKAPLIAHKVKIFVRRGGPNYQEGLKAMRLLGESLGVPI 463


>gi|73294119|gb|AAZ74673.1| ATP citrate lyase beta subunit [Hydrogenimonas thermophila]
          Length = 296

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 112/294 (38%), Gaps = 41/294 (13%)

Query: 103 VNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
           +    VE        +E Y+S  V           S +GGM++EE   +   ++ ++ I+
Sbjct: 11  LTHFIVEPFTPHTQDQEYYISATVVDNDD--VLYMSAEGGMEVEEGWDEKVNEV-RIPIN 67

Query: 161 PLIGVTSEDVASLCDML---ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
               +T E++           +  + +          +K + D + + LEINP+++++N 
Sbjct: 68  ----MTDEEMEKAVRANVPEGIPAENKERFAKFAIQFFKFYRDLNFAYLEINPIVMIEN- 122

Query: 218 RLRVLDSKISFDDNALYRHLDIQ---------ELRDVSEEDSREIEAKQHNLSYIAL--- 265
              +LD     DD A +   D            + D S E+    EA   + + + L   
Sbjct: 123 NAHILDLVARLDDTAGFLMRDKWGDIEFPTPFGMEDQSPEEKAIAEADAKSGASLKLTIL 182

Query: 266 --DGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITS 317
              G I  MV G G ++   D I    G    AN+ +  GG  + +          ++T 
Sbjct: 183 NPKGRIWTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTESETQFYAETILTLMTR 242

Query: 318 DSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
               +G ++ I G I     + K   GI+ A+ +        N  + +R  G N
Sbjct: 243 YEDERGKILIIGGAIANFTDVAKTFTGIIKALDKYADKLKAHNTKIYVRRGGPN 296


>gi|213418395|ref|ZP_03351461.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 96

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/95 (54%), Positives = 76/95 (80%)

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A +++V  AFKII SD +VK +L+NIFGGI+RCD++  GI+ AV+EV +N+P+V+RLEG 
Sbjct: 1   ATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGN 60

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
           N ++G + +A+SGLN+I A  L DAAQ++V AV+G
Sbjct: 61  NAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEG 95


>gi|325118886|emb|CBZ54438.1| cDNA FLJ55447, highly similar to ATP-citrate synthase, related
           [Neospora caninum Liverpool]
          Length = 1295

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 80/451 (17%), Positives = 144/451 (31%), Gaps = 110/451 (24%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
            + +    SA   L      VK  +    RGK             V+++ S      +++
Sbjct: 65  TTDLEDLPSAHPWLLTSRLTVKPDVLLKRRGKSGL----------VKLDLSWADAQKELK 114

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADI---LRELYLSLLVDRTSGMVAFIASTQGGM 141
            ++G+    +  G TG  ++   VE          E Y+++   R    + F  S +GG+
Sbjct: 115 ALMGTQFTMQ--GLTG-TLDHFIVEPFFPHDVAANEFYVAIRTLREGDEILF--SHRGGV 169

Query: 142 DIEEVAK---------DYPQKIFKLLI--------------------------DPLIG-- 164
           D+  V +         +   K     I                          D + G  
Sbjct: 170 DVGNVDEHARRVLIPIESQAKNDAEPISAMTNGCVPAAVPAAAAPCSTSLSAGDAMKGNV 229

Query: 165 --------------------VTSEDVASLCDML--ELQGQARIDGGDLFPN-LYKAFCDK 201
                               +T E++ SL   L  ++ G        +F   LY+ FC+ 
Sbjct: 230 NGSTQPKTLEEISKRGSECRLTQEELVSLVAPLVTDVAGNEAKKALPVFLAELYRQFCEM 289

Query: 202 DMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLDIQEL--------RDVSEEDSRE 252
             + LEINP            LD     D  A +                R  +EE+   
Sbjct: 290 HFAFLEINPFCFDAATHAFAILDCAAKLDHTAEFLCDKKWGHICFPSPFGRRFTEEERYI 349

Query: 253 IE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQ 305
            E          L+ +   G I  ++ G G ++   D +    +G    N+ +  G   +
Sbjct: 350 RELDSKTGASLKLTVLNPKGRIWTLIAGGGASVVYADTVCDLGFGDELCNYGEYSGAPSE 409

Query: 306 DKVAAAFKIITSDSSV------KGILINIFGGIMRCDVLVK---GILSAVKEV-----KI 351
                  K I    +       +G ++ I GGI     +     GI+ A+++      + 
Sbjct: 410 ITTYEYTKTILGLMTAPGSYREEGKVLLIGGGIANFTNVADTFRGIIRALRDFREQLREF 469

Query: 352 NIPLVMRLEGANVDIGNRLIAESG--LNVIT 380
            + + +R  G N   G + + E G  LN+  
Sbjct: 470 KVRIYVRRGGPNYQEGLKRMREVGEELNIHV 500


>gi|7160184|emb|CAB76164.1| ATP citrate lyase, subunit 2 [Sordaria macrospora]
 gi|289614488|emb|CBI58772.1| ATP citrate lyase subunit 2 [Sordaria macrospora]
          Length = 481

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 137/414 (33%), Gaps = 90/414 (21%)

Query: 30  AAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREIL 87
            AE     L   G  +V K       RGK     L            +     + I E  
Sbjct: 59  QAEVTYPWLLQDGARFVAKPDQLIKRRGKSGLLALNK----------TWPEAKAWIAERA 108

Query: 88  GSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEE 145
           G     + T      +    VE         E Y++            +   +GG+D+ +
Sbjct: 109 GKAQKVEHTEG---VLRQFLVEPFVPHPQETEYYINGDW--------ILFYHEGGVDVGD 157

Query: 146 VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
           V     +KI  + +D     ++E++AS      +         D    LY  + D   + 
Sbjct: 158 VDAKA-EKIL-IPVDLSQYPSNEELASTLLK-HVPKGIHNVLVDFIARLYAVYVDCQFTY 214

Query: 206 LEINPLIIMKN-----GRLRVLDSKISFDDNALYRHLDIQEL------------------ 242
           LEINPL+++ N       +  LD     D  A +   +   +                  
Sbjct: 215 LEINPLVVIPNEDATSAEVHFLDLAAKLDQTADFECGNKWAIARSPAALGIVAQSSNGGV 274

Query: 243 ---------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMAT 282
                          R++++E++   E          L+ +  +G I  +V G G ++  
Sbjct: 275 NIDAGPPIEFPAPFGRELTKEEAYIAELDAKTGASLKLTVLNPNGRIWTLVAGGGASVVY 334

Query: 283 MDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIITSDSSV-----KGILINIFGGIMRC 335
            D I   G     AN+ +  G   + +     + +           +G ++ I GGI   
Sbjct: 335 ADAIASAGFADELANYGEYSGAPTESQTYHYARTVLDLMLRAPVSEQGKVLFIGGGIANF 394

Query: 336 DVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA----ESGLN 377
             +    KG++ A++E     ++ N  + +R  G N   G + +     E GLN
Sbjct: 395 TNVASTFKGVIKALREYGKALIEHNTQIWVRRAGPNYQEGLKNLKAATQELGLN 448


>gi|154311915|ref|XP_001555286.1| hypothetical protein BC1G_05991 [Botryotinia fuckeliana B05.10]
 gi|150850641|gb|EDN25834.1| hypothetical protein BC1G_05991 [Botryotinia fuckeliana B05.10]
          Length = 475

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 132/379 (34%), Gaps = 76/379 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 58  DQAETLYPWLLVPGSKFVAKPDQLIKRRGKSGLLALNK----------TWPEAKAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G  +  + T      +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKPVTVETTVG---TLRQFLVEPFVPHPEGTEYYININSQREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +D     ++E++A+     ++         D    LY  + D   +
Sbjct: 163 DVDAKAEKLL--IPVDLAEYPSNEEIAAGLLK-KVPQGVHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLDIQEL-------- 242
            LEINPL+++ N       +  LD     D  A +         R      +        
Sbjct: 220 YLEINPLVVIPNAEGTSAEVHFLDLAAKIDQTAEFECGVKWAIARSPAALGMAAVKAADG 279

Query: 243 -----------------RDVSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAM 280
                            R++++E++   E          L+ +  +G +  +V G G ++
Sbjct: 280 KVNIDAGPPMEFPAPFGRELTKEEAYIAELDAKTGASLKLTVLNANGRVWTLVAGGGASV 339

Query: 281 ATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIM 333
              D I   G     AN+ +  G   + +     + +      S  S +G ++ I GGI 
Sbjct: 340 VYADAIASSGFADELANYGEYSGAPTETQTFHYARTVLDLMLRSPPSPEGKVLFIGGGIA 399

Query: 334 RCDVLV---KGILSAVKEV 349
               +    KG++ A++EV
Sbjct: 400 NFTNVASTFKGVIRALREV 418


>gi|12834797|dbj|BAB23048.1| unnamed protein product [Mus musculus]
          Length = 98

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/82 (52%), Positives = 61/82 (74%)

Query: 317 SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGL 376
           SD  V+ IL+NIFGGIMRCDV+ +GI+ AVK+++I IP+V+RL+G  VD    LIA+SGL
Sbjct: 1   SDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGL 60

Query: 377 NVITAIDLDDAAQKIVHAVKGV 398
            ++   DLD+AA+ +V   + V
Sbjct: 61  KILACDDLDEAAKMVVKLSEIV 82


>gi|73293938|gb|AAZ74670.1| ATP citrate lyase beta subunit [Nitratifractor salsuginis DSM
           16511]
          Length = 310

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 115/316 (36%), Gaps = 39/316 (12%)

Query: 81  SDIREILGSTLITKQTGPTGS--RVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIAS 136
            D  + +        T  +G   R+    VE        +E Y++              S
Sbjct: 1   EDAAKWIDEKQSHDVTLLSGQHGRLTHFIVEPFTPPTQDQEYYIAATTVGEDD--VLYMS 58

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
            +GGM++EE  +   +K+ ++ I   +     E         ++  ++           +
Sbjct: 59  AEGGMEVEEGWE---EKVHEVRIPINMPEADIEKAIRANVPEDIPAESHEAFATFAIQFF 115

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD---------IQELRDVS 246
           K F D   + LEINPL+++      +LD     DD A +   +            + + S
Sbjct: 116 KFFRDMHFAYLEINPLVLIGT-DAHILDLVARLDDTAGFMMKEKWGDIEFPTAFGMEEQS 174

Query: 247 EEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDV 299
            E+    EA   + + + L      G I  MV G G ++   D I    G    AN+ + 
Sbjct: 175 PEEKAIAEADSKSGASLKLTVLNPQGRIWTMVAGGGASVVYADTIADLAGVKDLANYGEY 234

Query: 300 GGGADQDKVAAA----FKIITSDSSVKGILINIFGGIMRCDVLVK---GILSAVKE---- 348
            GG    +        F ++T     +G ++ I G I     + K   GI++A+++    
Sbjct: 235 SGGPTTGETEFYAETIFDLMTRYPDPRGKILIIGGAIANFTDVAKTFTGIINALEKWAPK 294

Query: 349 -VKINIPLVMRLEGAN 363
             + N  + +   G N
Sbjct: 295 LKEHNTKIYVSSGGPN 310


>gi|70922358|ref|XP_734358.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56507024|emb|CAH83414.1| hypothetical protein PC300490.00.0 [Plasmodium chabaudi chabaudi]
          Length = 113

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
           VGG A ++++A A KII ++   K   INI GGIMRCD++ +GI++A K+++   PL++R
Sbjct: 1   VGGSATEEEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIQFKKPLIVR 60

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           LEG N     +++ ES +  I   D++ AA+K V   
Sbjct: 61  LEGTNEKEAIKILEESNIKCIICQDMNLAAEKAVALA 97


>gi|240280197|gb|EER43701.1| ATP-citrate lyase [Ajellomyces capsulatus H143]
          Length = 468

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 71/409 (17%), Positives = 125/409 (30%), Gaps = 97/409 (23%)

Query: 29  HAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AES    L       V K       RGK     L            +     + I E 
Sbjct: 58  DQAESTYPWLLAKDVRLVAKPDQLIKRRGKSGLLALNK----------TWPEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
            G     +        +    VE   D                    + + +GG+D+ +V
Sbjct: 108 AGKEQKVETVTG---VLRQFLVEPFGD------------------WILFTHEGGVDVGDV 146

Query: 147 AKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL 205
                + +  + +D        E  A+L   +           D    LY  + D   + 
Sbjct: 147 DAKAEKLL--IPVDLKNYPSNDEIAATLLSKI--PQGLHNVLVDFITRLYAVYVDCQFTY 202

Query: 206 LEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL------------------ 242
           LEINPL+++ N       +  LD     D  A +       +                  
Sbjct: 203 LEINPLVVIPNATKTSAAVHFLDLAAKLDQTAEFECGTKWAMARSPAALGTPNAPRTDGK 262

Query: 243 ----------------RDVSEEDSREIEAKQHNLSYIAL-----DGNIGCMVNGAGLAMA 281
                           R++S+E+    +      + + L     +G I  +V G G ++ 
Sbjct: 263 VTIDAGPPMEFPAPFGRELSKEEKFIADMDAKTGASLKLTVLNANGRIWTLVAGGGASVV 322

Query: 282 TMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMR 334
             D I   G     AN+ +  G   + +     + I      +    +G ++ I GGI  
Sbjct: 323 YADAIASAGFVADLANYGEYSGAPTETQTFNYARTILDLMLRAPMHPQGKVLFIGGGIAN 382

Query: 335 CDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIAESG 375
              +    KG++ A++E     V+  + + +R  G N   G + I   G
Sbjct: 383 FTNVASTFKGVIRALREVASILVEHKVQIWVRRAGPNYQEGLKNIKAVG 431


>gi|78221528|ref|YP_383275.1| ATP citrate lyase subunit 1 [Geobacter metallireducens GS-15]
 gi|78192783|gb|ABB30550.1| ATP citrate lyase subunit 1 [Geobacter metallireducens GS-15]
          Length = 423

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 63/306 (20%), Positives = 117/306 (38%), Gaps = 23/306 (7%)

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           VR+ S++   +   R++      T   G    +   V  E       E+Y+S+       
Sbjct: 63  VRICSNVFDAMVAKRDLF---FATHHQGNREVQACGVTFEGYIASDIEIYVSISESSEYR 119

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           M   + +T+GG+D+E+V    P+    ++ +P+ GV S  +      L+   Q       
Sbjct: 120 MPVLLLTTKGGVDVEDVP---PEDKRTIVFNPVTGVKSFHINDALRELKCPPQYISSLVQ 176

Query: 190 LFPNLYKAFCDKDMSLLEINPL---IIMKNGRLRVLDSKISFD-DNALYRHLDIQE---- 241
             P L++ + +  ++ LE+NP+    +         D K SFD DN  ++ L   E    
Sbjct: 177 HLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFDQDNPAWKRLGYPEEIFS 236

Query: 242 ---LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
               +  SE +       Q +++ +   G I   + G G   A  +I+           D
Sbjct: 237 TTITQFESEINVLRTHQGQSDVTEVNPKGTILPFIFGGGANSAATEILAD---RAIISSD 293

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGILSAVKEVKINIPL 355
            GG    +K+ A   I       +  ++ + GG      +    K I  +++E     P 
Sbjct: 294 FGGNPPYEKIRAIADITFKHWLPQANVVLLIGGRANNTNIFTTFKAIFDSLREHIRLNPD 353

Query: 356 VMRLEG 361
           V  + G
Sbjct: 354 VFVVAG 359


>gi|73294270|gb|AAZ74675.1| ATP citrate lyase beta subunit [Sulfurimonas autotrophica DSM
           16294]
          Length = 306

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 63/303 (20%), Positives = 114/303 (37%), Gaps = 47/303 (15%)

Query: 98  PTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF 155
           P   R+    VE         E Y+S  V           S +GGM++EE      +K+ 
Sbjct: 14  PKVDRLTHFIVEPFTPHDQSEEYYISATVVGDED--VLYLSAEGGMEVEEGWD---EKVT 68

Query: 156 KLLIDPLIGVTSEDVASLCDML---ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI 212
           +L        T E++A     +   +++ + + +        +KA+   + + LEINP +
Sbjct: 69  ELAFPITA--TEEEIAEKIKAMSRPDVKPEDKENFAKFAIGFFKAYRKLNFAYLEINPFV 126

Query: 213 IMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHN------------- 259
           +  + ++ +LD     DD A +   +  E  D+    +  +EAK                
Sbjct: 127 MQGS-KIELLDMVAKLDDTAGFMMTE--EWGDIEYPTAFGMEAKSPEVEADLISRCKNRA 183

Query: 260 ---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKI 314
              L+ +  D  I  MV G G ++   D I  + G    AN+ +  GG          + 
Sbjct: 184 SLKLTLLKPDARIWTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGXTKFYAET 243

Query: 315 IT------SDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLE 360
           +        D   +  ++ I G I     + K   GI+ A +E      ++ I + +R  
Sbjct: 244 LLDLMTREKDPKGRDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKEVGIKIYVRRG 303

Query: 361 GAN 363
           G N
Sbjct: 304 GPN 306


>gi|73294212|gb|AAZ74674.1| ATP citrate lyase beta subunit [Sulfurimonas sp. Go25-1]
          Length = 308

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 112/301 (37%), Gaps = 43/301 (14%)

Query: 98  PTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF 155
           P   ++    VE         E Y+S  V           S +GGM++EE  +   +K+ 
Sbjct: 16  PKVDKLTHFIVEPFTPHDQSEEYYISATVVGDQD--VLYMSAEGGMEVEEGWE---EKVT 70

Query: 156 KLLIDPLIGVTSEDVASLCDM---LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI 212
           ++        T E++A         +++ + + +        +KA+ + + + LEINP +
Sbjct: 71  EVAFPITA--TEEEIAEKIKANIPADVKEEDKENFAKFAIGFFKAYRELNSAYLEINPFV 128

Query: 213 IMKNGRLRVLDSKISFDDNALYRH---------LDIQELRDVSEEDSREIEAKQHNLSYI 263
           +  + ++ +LD     DD A +                +   S E     EA     + +
Sbjct: 129 MQGS-KIELLDMVAKLDDTAGFMTVEEWGDVEYPTAFGMESKSPEVEAIEEADAKTGASL 187

Query: 264 AL-----DGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT 316
            L     +  I  MV G G ++   D I  + G    AN+ +  GG    +     + + 
Sbjct: 188 KLTLLKPEARIWTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGETKFYAETLL 247

Query: 317 ------SDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGA 362
                  D   +  ++ I G I     + K   GI+ A +E      ++ + + +R  G 
Sbjct: 248 DLMTREKDPKGRDKILIIGGAIANFTDVAKTFTGIIQAFEEYAEKMKEVGVKIYVRRGGP 307

Query: 363 N 363
           N
Sbjct: 308 N 308


>gi|319414081|gb|ADV52238.1| succinate dehydrogenase [Chortoicetes terminifera]
          Length = 80

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/80 (56%), Positives = 60/80 (75%)

Query: 206 LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
           +EINPL     G +  +D+KI FDDNA +R  +I EL + +E D RE++A ++NL+YI +
Sbjct: 1   VEINPLAETAEGNVVAVDAKIQFDDNAKFRQREIFELDNTTETDPREVQAAKYNLNYIGM 60

Query: 266 DGNIGCMVNGAGLAMATMDI 285
            GNIGC+VNGAGLAMATMDI
Sbjct: 61  SGNIGCLVNGAGLAMATMDI 80


>gi|261885863|ref|ZP_06009902.1| succinyl-CoA synthetase subunit beta [Campylobacter fetus subsp.
          venerealis str. Azul-94]
          Length = 87

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 10/97 (10%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          MNIHE+QAK LLR + + VA G+++ SV  A +A K L G ++ VK+QIHA         
Sbjct: 1  MNIHEFQAKELLRDFGINVADGIMVVSVDDALNAAKKLGGSVWAVKAQIHA--------- 51

Query: 61 ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTG 97
                 GGV++  SL  V     +ILG TL+TKQTG
Sbjct: 52 -GGRGLGGGVKIAKSLDEVKEYASKILGMTLVTKQTG 87


>gi|149928248|ref|ZP_01916492.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
 gi|149823054|gb|EDM82295.1| succinyl-CoA synthetase subunit beta [Limnobacter sp. MED105]
          Length = 59

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/57 (54%), Positives = 39/57 (68%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
          M IHEYQ K +L+KY V V  G    S+  A +A + L GP++VVK+QIHAGGRGK 
Sbjct: 1  MKIHEYQGKEILKKYGVAVPTGYPCFSIDEAIAAAEKLGGPVWVVKAQIHAGGRGKA 57


>gi|294948876|ref|XP_002785939.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900047|gb|EER17735.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
          Length = 116

 Score = 95.8 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/76 (55%), Positives = 57/76 (75%)

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           ++EINP   +K+GR+ V D+K++FDDN  +R  DI   RD S+ D RE+ A + +L+YI 
Sbjct: 1   MVEINPRAEIKDGRVTVCDAKVNFDDNVQFRQKDIFSRRDASQGDPREVAAFEWDLNYIG 60

Query: 265 LDGNIGCMVNGAGLAM 280
           LDG+IGCMVNGAGLAM
Sbjct: 61  LDGSIGCMVNGAGLAM 76


>gi|213861747|ref|ZP_03386217.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 88

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 49/77 (63%)

Query: 93  TKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQ 152
           T QT   G  VN + VE   DI +ELYL  +VDR+S  V F+AST+GG++IE+VA++ P 
Sbjct: 1   TYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPH 60

Query: 153 KIFKLLIDPLIGVTSED 169
            I K+ +DPL G     
Sbjct: 61  LIHKVALDPLTGPIPYQ 77


>gi|326471619|gb|EGD95628.1| ATP-citrate-lyase [Trichophyton tonsurans CBS 112818]
          Length = 425

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 115/362 (31%), Gaps = 74/362 (20%)

Query: 29  HAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86
             AE+    L  PG  +V K       RGK     L            +     + I E 
Sbjct: 58  DQAEATYPWLLAPGARFVAKPDQLIKRRGKSGLLALNK----------TWAEARAWIAER 107

Query: 87  LGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            G     +Q       +    VE         E Y+++   R    + F  + +GG+D+ 
Sbjct: 108 AGKE---QQVETVVGVLRHFLVEPFVPHPQDTEYYININSVREGDWILF--THEGGVDVG 162

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS 204
           +V     + +  + +        E  A L   +           D    LY  + D   +
Sbjct: 163 DVDAKAEKLLIPVNLK-QYPSNEEIAAGLLSKI--PKGLHNVLVDFITRLYAVYVDCQFT 219

Query: 205 LLEINPLIIMKNGR-----LRVLDSKISFDDNALYRHLDIQEL----------------- 242
            LEINPL+++ N       +  LD     D  A +       +                 
Sbjct: 220 YLEINPLVVIPNEDKTSASVHFLDLAAKLDQTAEFECGTKWAIARSPAALGLAASAAATS 279

Query: 243 ------------------RDVSEED--SREIEAKQH---NLSYIALDGNIGCMVNGAGLA 279
                             R++S+E+    +++AK      L+ +  +G I  +V G G +
Sbjct: 280 SKVTIDAGPPMDFPAPFGREMSKEEKYISDMDAKTGASLKLTVLNANGRIWTLVAGGGAS 339

Query: 280 MATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITSDS-----SVKGILINIFGGI 332
           +   D I   G     AN+ +  G   + +     + +           +G ++ I GGI
Sbjct: 340 VVYADAIASAGHVSELANYGEYSGAPTETQTYNYARTVLDLMLRAPLRPEGKVLFIGGGI 399

Query: 333 MR 334
             
Sbjct: 400 AN 401


>gi|154315096|ref|XP_001556871.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10]
 gi|150847550|gb|EDN22743.1| hypothetical protein BC1G_04587 [Botryotinia fuckeliana B05.10]
          Length = 384

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 17/176 (9%)

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +L++ +DR++     I   QG  +      + P K  KL         S  ++     L
Sbjct: 204 YHLTVGIDRSNRCPCLIIQEQGKEN------EPPTKSIKLPFSYDATRMSNVLSKCSSYL 257

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEI-----NPLIIMKNGRLRVLDSKISFDDNA 232
            L+ Q+R+    L  +LY+ F +K+  LLE          +  + R+ V++++  FDD A
Sbjct: 258 GLKPQSRL-LKSLVSDLYELFKEKEAFLLECVVKSQKATKLEAHQRMVVVNARFGFDDAA 316

Query: 233 ---LYRHLDIQELRDVSEEDSREIEAKQHNLSYIAL--DGNIGCMVNGAGLAMATM 283
                R  +I  L     +D  E +A++  + YI L  DGNIG +VNGAGLAM T+
Sbjct: 317 FKSSNRQAEIHSLPRADIQDPAEKDAEKDGIVYIKLAGDGNIGTLVNGAGLAMNTV 372


>gi|302412755|ref|XP_003004210.1| ATP-citrate synthase [Verticillium albo-atrum VaMs.102]
 gi|261356786|gb|EEY19214.1| ATP-citrate synthase [Verticillium albo-atrum VaMs.102]
          Length = 368

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 117/307 (38%), Gaps = 65/307 (21%)

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            + + +GG+D+ +V +   +KI  + +D     ++E++AS     ++         D   
Sbjct: 32  ILFTHEGGVDVGDVDEKA-EKIL-IPVDLSEYPSNEEIASTLLK-KVPKGVHNVLVDFIS 88

Query: 193 NLYKAFCDKDMSLLEINPLIIMKN-----GRLRVLDSKISFDDNALY---------RHLD 238
            LY  + + + + LEINPL+++ N       +  LD     D  A +         R   
Sbjct: 89  RLYAVYVECNFTYLEINPLVVIPNEDATSATVHFLDLAAKIDQTADFECGVKWAIARSPA 148

Query: 239 IQEL------------------------RDVSEEDSREIE-----AKQHNLSYIALDGNI 269
              L                        R++++E++   +          L+ +   G I
Sbjct: 149 ALGLTNVAGGEKVNIDAGPPLDFPAPFGRELTKEEAYIADLDAKTGASLKLTVLNATGRI 208

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIITSDS-----SVK 322
             +V G G ++   D I   G A   AN+ +  G   + +     + +         + +
Sbjct: 209 WTLVAGGGASVVYADAIASAGFADQLANYGEYSGAPTESQTYHYARTVLDLMLRAPVAKE 268

Query: 323 GILINIFGGIMRCDVLV---KGILSAVKE-----VKINIPLVMRLEGANVDIGNRLIA-- 372
           G ++ I GGI     +    KG++ A++E      + N+ + +R  G N   G + +   
Sbjct: 269 GKVLFIGGGIANFTNVASTFKGVIRALREFATTLNEHNVQIWVRRAGPNYQEGLKNMKAA 328

Query: 373 --ESGLN 377
             E GLN
Sbjct: 329 TQELGLN 335


>gi|297670917|ref|XP_002813598.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
           mitochondrial-like [Pongo abelii]
          Length = 79

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 48/66 (72%)

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           V+ IL+NIFGGI+ C ++  GI  A +E+++ +PLV+RLEG NV    +++  SGL + +
Sbjct: 2   VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITS 61

Query: 381 AIDLDD 386
           AIDL+D
Sbjct: 62  AIDLED 67


>gi|47204438|emb|CAF96146.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 289

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 90/262 (34%), Gaps = 38/262 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK     +  D  G              +R+ L S L+ + T
Sbjct: 49  WLLTERLVVKPDQLIKRRGKLGLVGVNLDLNG--------------VRDWLKSRLMKETT 94

Query: 97  GPTGSRVNC-VYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK 153
                 V     +E         E Y+ +   R    V F    +GG+D+ +V      K
Sbjct: 95  VGKARGVLKNFLIEPFVPHKQEEEFYVCIYATREGDYVLF--HHEGGVDVGDVDA----K 148

Query: 154 IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
             KLLI     ++ + V      L +    +         L+  + D   + LEINPL++
Sbjct: 149 AKKLLIGVDEKISEDTVKKELLPL-VPNDKKSVLSSFIVGLFNLYEDLFFTYLEINPLVV 207

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRD----------VSEEDSREIEAKQH---NL 260
            K+G + VLD     D  A Y         D            E    +++AK      L
Sbjct: 208 TKDG-VFVLDMAAKIDATADYICKAKWGDVDFPPPFGREAYPEEAYIADLDAKSGASLKL 266

Query: 261 SYIALDGNIGCMVNGAGLAMAT 282
           + +   G I  MV G G ++  
Sbjct: 267 TLLNPRGRIWTMVAGGGASVVY 288


>gi|320532400|ref|ZP_08033239.1| ATP-grasp domain protein [Actinomyces sp. oral taxon 171 str.
          F0337]
 gi|320135387|gb|EFW27496.1| ATP-grasp domain protein [Actinomyces sp. oral taxon 171 str.
          F0337]
          Length = 65

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKG 57
          M+++EYQA+ L R++ VPV  G V ++   A SA ++L      L VVK+Q+  GGRGK 
Sbjct: 1  MDLYEYQARNLFRQHGVPVLDGAVATTPEEARSAAQSLLDAGSELVVVKAQVKTGGRGKA 60

Query: 58 RFKEL 62
             +L
Sbjct: 61 GGVKL 65


>gi|115491467|ref|XP_001210361.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
 gi|114197221|gb|EAU38921.1| succinyl-CoA ligase alpha-chain, mitochondrial precursor
           [Aspergillus terreus NIH2624]
          Length = 577

 Score = 89.6 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 11/175 (6%)

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             + V +      ++YL+L VDRT+     +AST         ++           D   
Sbjct: 393 KSIPVREATPAESDIYLNLTVDRTALSPCILASTSADFTPAATSRFPFPYATTQFTDGEN 452

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLD 223
            +    V ++   L+L   A+    +L   L++ F +K+  LLE+  + +  +G   V  
Sbjct: 453 SI----VEAVASHLQLPPSAKGRLAELIQALWEIFKEKEAYLLEVRTISV--DGAFEVRG 506

Query: 224 SKISFDDNALY---RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN--IGCMV 273
           ++  FDD A     R  ++  LR + EE   E+EA++  + Y+ LDG   IG + 
Sbjct: 507 ARFGFDDAAFRSSGRQEEVHRLRQLEEEVHEEVEAEKDGIVYVKLDGEGSIGTLG 561


>gi|213416643|ref|ZP_03349787.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 73

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 12 LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
            +Y +P   G   ++   AE A   +    +VVK Q+HAGGRGK           GGV+
Sbjct: 1  FARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA----------GGVK 50

Query: 72 VESSLKSVISDIREILGSTLITK 94
          V  S + + +     LG  L+T 
Sbjct: 51 VVKSKEEIRAFAENWLGKRLVTY 73


>gi|290558794|gb|EFD92188.1| hypothetical protein BJBARM5_1988 [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 109

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 56/92 (60%), Gaps = 3/92 (3%)

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV 364
           + +VA A +++  DS+ K + INIFGG+ + D + +GI+ A+ ++ I   +V+RL+G N 
Sbjct: 16  RQRVAEAIELV-KDSNPKVLFINIFGGVTKADTVAEGIVQAINKLNITFKIVVRLKGFNE 74

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             G  L+ ++   + +  D+ +A Q++V   K
Sbjct: 75  AKGKELLKKN--EIDSFTDMGEAIQEVVKLAK 104


>gi|255633624|gb|ACU17171.1| unknown [Glycine max]
          Length = 65

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/63 (58%), Positives = 49/63 (77%)

Query: 333 MRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           M+CDV+  GI++A KEV + +P+V+RLEG NVD G R++ ESG+ +ITA DLDDAAQK V
Sbjct: 1   MKCDVIASGIVNAAKEVALKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAAQKAV 60

Query: 393 HAV 395
            A 
Sbjct: 61  KAA 63


>gi|229047522|ref|ZP_04193112.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
 gi|228723769|gb|EEL75124.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
           AH676]
          Length = 64

 Score = 82.7 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/63 (49%), Positives = 48/63 (76%)

Query: 333 MRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           M+CDV+ +G++ A K+V + +PLV+RLEG NV++G +++ ESGLN++ A  + D AQKIV
Sbjct: 1   MKCDVIAEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 60

Query: 393 HAV 395
             V
Sbjct: 61  SLV 63


>gi|313214854|emb|CBY41091.1| unnamed protein product [Oikopleura dioica]
          Length = 70

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 34/56 (60%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
          ++IHEY +  LL +Y V   +G + +S   A    K LP P  VVK+Q+ AGGRGK
Sbjct: 15 LSIHEYMSFNLLNQYGVKTPEGHMATSPEQAFDIAKNLPTPDCVVKAQVLAGGRGK 70


>gi|24658419|ref|NP_729076.1| sucb, isoform B [Drosophila melanogaster]
 gi|23094101|gb|AAN12099.1| sucb, isoform B [Drosophila melanogaster]
          Length = 112

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          +N+ E+Q+K LL+KY V + +  V+++  A    +KT   P YVVK+QI AGGRGKG F 
Sbjct: 23 LNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFD 82

Query: 61 ELPADSKGGVRVE 73
                KGGV + 
Sbjct: 83 N---GFKGGVHIT 92


>gi|158520154|ref|YP_001528024.1| ATP-grasp domain-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158508980|gb|ABW65947.1| ATP-grasp domain protein [Desulfococcus oleovorans Hxd3]
          Length = 253

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK +L  Y VPV + V+  +   A +A   L  P+ V+K+              +
Sbjct: 42  LSEYEAKQVLAAYGVPVTREVLAKTPDEAVAAAGELGYPV-VLKA---------CSPSLM 91

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G V +  + +  +    + + S L ++  G        + V +     REL + +
Sbjct: 92  HKSDTGLVELGLADEKAVRSAFDRISSRLTSEADG--------MLVSEMVSGKRELVVGM 143

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G    +    GG+  E       +      I+      S   A L D       
Sbjct: 144 NRDPQFGPCVMLG--LGGVMTEIFKDAVFRMAPVDPIEVAEMAGSLKAAKLLDAFRGEAP 201

Query: 182 QARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDN 231
             R           +   D D    ++INP+++  +GR++ +D+ I  + +
Sbjct: 202 ADRDALYRCVIGAGRIGLDWDAVSEIDINPVLVSADGRVKAVDALIVLNPD 252


>gi|116789331|gb|ABK25207.1| unknown [Picea sitchensis]
          Length = 225

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 28/198 (14%)

Query: 208 INPLIIMKNGRLRVLDSKISFDDNALYRHLD----------IQELRDVSEEDSREIEAKQ 257
           +NP  ++ NG    LD +   DD A +++               +   SE     ++ K 
Sbjct: 1   MNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVMSPSESAIHGMDEKT 59

Query: 258 HN---LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAF 312
            +    + +   G I  MV G G ++   D +   G A    N+ +  G  ++D+V    
Sbjct: 60  SSSLKFTILNPKGRIWTMVAGGGASVIYADTVGDLGFANELGNYAEYSGAPNEDEVLQYA 119

Query: 313 KII----TSDSSVKGILINIFGGIMRCDVL---VKGILSAVKEVKINIP-----LVMRLE 360
           +++    T++   +   + I GGI     +     GI+ A++E +  +      + +R  
Sbjct: 120 RVLIDCATANPDGRKRALVIGGGIANFTDVSATFSGIIRALREKESKLKASRMQVYVRRG 179

Query: 361 GANVDIGNRLIAESGLNV 378
           G N   G   +   G  +
Sbjct: 180 GPNYQNGLAKMRALGEEI 197


>gi|17028103|gb|AAL34316.1| ATP-citrate lyase [Rattus norvegicus]
          Length = 851

 Score = 77.7 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 18/142 (12%)

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS 317
           L+ +   G I  MV G G ++   D I   GG    AN+ +  G   + +     K I S
Sbjct: 17  LTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILS 76

Query: 318 ----DSSVKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANVD 365
               +    G ++ I G I     +    KGI+ A+++      +  + + +R  G N  
Sbjct: 77  LMTREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQ 136

Query: 366 IGNRLIAE----SGLNVITAID 383
            G R++ E    +G+ +     
Sbjct: 137 EGLRVMGEVGKTTGIPIHVFGT 158


>gi|156379982|ref|XP_001631734.1| predicted protein [Nematostella vectensis]
 gi|156218779|gb|EDO39671.1| predicted protein [Nematostella vectensis]
          Length = 79

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
          +++HE+ +  +L+   +   KG V  +   A      L     VVK+Q+ AGGRGKG+F+
Sbjct: 8  LSVHEHHSMKILQDAGILTPKGGVARTAEQAYEIATVLVEGDMVVKAQVLAGGRGKGKFE 67

Query: 61 ELPADSKGGVRVESS 75
                KGGVR+  S
Sbjct: 68 ---GGLKGGVRIVFS 79


>gi|16263072|ref|NP_435865.1| hypothetical protein SMa1146 [Sinorhizobium meliloti 1021]
 gi|14523730|gb|AAK65277.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 899

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 83/243 (34%), Gaps = 29/243 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           ++E +AKA+L  Y +PV + ++ +S   AE+    L    P  VVK           +  
Sbjct: 489 LNEPEAKAVLAAYGIPVPQTIIATSPKEAEAIAGLLLAGAPKLVVK--------LISKSI 540

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  G V    S  +       I+                    +E       EL L
Sbjct: 541 THKSDVGGVVLDILSPVAAREAAEAIVARLKAHDPIAVVDGFAVQPMIERK--HAWELLL 598

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------L 173
            +  D   G V    S  GG+ +E VA         + + PL  V + D+         L
Sbjct: 599 GVTRDPIFGPVVLFGS--GGVSVEVVADTA------VALPPLDAVLAGDLIDETRVGKLL 650

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNA 232
                     R         L +   D    L ++INPL+    G +  LD +I  +  A
Sbjct: 651 AGFRNEPAADRAAICKALTALSQLIVDFPCVLSMDINPLVASAEG-VIALDGRIEINPRA 709

Query: 233 LYR 235
           + R
Sbjct: 710 VTR 712



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 59/166 (35%), Gaps = 33/166 (19%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG---- 290
           R   + EL D +E  +R    +            +  + NG G  +  +D +  +G    
Sbjct: 274 RIEGLGELFDATETIARFPPLEHS---------RVAIVTNGGGAGVLAVDRLIDFGCALA 324

Query: 291 -GAP----------------ANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGI 332
             +P                AN +D+ G A   +   A + I  D  V  +++ N   G+
Sbjct: 325 DLSPETVGTLDRNLPANWSRANPVDIIGDAPPHRYKTAVETIVRDVGVDILIVMNCPTGL 384

Query: 333 MRCDVLVKGILSAVKEVKIN-IPLV-MRLEGANVDIGNRLIAESGL 376
                    I S  +   I+  P++   L G     G  L+ ++GL
Sbjct: 385 ASPVDAAHAIASLAQSGTISGKPVLTCWLGGRTAREGRTLLQQAGL 430


>gi|311108110|ref|YP_003980963.1| ATP-grasp domain-containing protein 2 [Achromobacter xylosoxidans
           A8]
 gi|310762799|gb|ADP18248.1| ATP-grasp domain protein 2 [Achromobacter xylosoxidans A8]
          Length = 710

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 75/241 (31%), Gaps = 37/241 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AKALL +  +PV +G V  +   A  A + L     V+K                
Sbjct: 486 LSEVDAKALLGRAGLPVPRGEVARTPDEAARAFEVLRCDGVVMKV--------ISSTITH 537

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
             D  G      S  +  +    I                   V VE        E+ + 
Sbjct: 538 KTDVGGVQLGVRSPDAARAAHTRICEQVAQAHPEHAN----QGVLVEAMLPGRFVEVVVG 593

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D   G V       GG+ IE       + +          +T +   ++        
Sbjct: 594 IHRDPVFGHVCTFG--LGGVSIELFKDVSRRLLP---------LTPQAARAMIAETRCSQ 642

Query: 178 ---ELQGQARIDGGDLFPNLYKA--FCDKDMS---LLEINPLIIMKNGR-LRVLDSKISF 228
                +GQ   D   L   L K   F          LEINPL +   G+ +  LD+ +SF
Sbjct: 643 LLNGYRGQEPYDVDALVEALVKMSDFVAGHADRIEELEINPLAVRPRGQGVMALDAVLSF 702

Query: 229 D 229
           D
Sbjct: 703 D 703


>gi|225571893|ref|ZP_03780763.1| hypothetical protein CLOHYLEM_07867 [Clostridium hylemonae DSM
           15053]
 gi|225159450|gb|EEG72069.1| hypothetical protein CLOHYLEM_07867 [Clostridium hylemonae DSM
           15053]
          Length = 87

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 37/76 (48%)

Query: 318 DSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLN 377
           + S   + +N+FGGI  C  + +GI  A  E+ I  P+V++  G N + G  +  + G  
Sbjct: 1   NKSTDYVFVNVFGGINNCADMAEGIARAYTELGIRKPVVVKSRGFNQEQGWSIYEKLGFP 60

Query: 378 VITAIDLDDAAQKIVH 393
                  D+A Q ++ 
Sbjct: 61  QTKYGTTDEAVQTLLK 76


>gi|116619397|ref|YP_821553.1| CoA-binding domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222559|gb|ABJ81268.1| CoA-binding domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 703

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 82/226 (36%), Gaps = 20/226 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY+AK +L ++ +PV  G +  +V  A++       P+  +K+Q  A             
Sbjct: 491 EYKAKEILARFGIPVPGGALARTVEEAQAIAAKAGYPV-ALKAQAAAL---------SHK 540

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV    SL+   +             +  P G  ++ V VE  +    EL +    
Sbjct: 541 SDAGGV--ALSLRDGEALASAWSRMHDSLSRATP-GLELDGVLVEQMSPPGVELIVGARR 597

Query: 125 DRTSGMVAFIASTQGGMDIEEVA--KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           D   G+V  +    GG+  E     +  P +I +  I   + +  +  A L  +      
Sbjct: 598 DPDWGLVLLVG--FGGVLAEAFHDVRLLPPEISRERISQEL-LRMKSGALLRGLRGSPAM 654

Query: 183 ARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGR-LRVLDSKI 226
                 D+   L          L ++INP+++   G     LD+  
Sbjct: 655 DVAAAADIVARLANLVLSTPSILEVDINPVMVYPAGEGAVALDALF 700


>gi|73537703|ref|YP_298070.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72121040|gb|AAZ63226.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 711

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 77/233 (33%), Gaps = 21/233 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E + KALL +  VP  +GVV  S   A  A + +     V+K    A          
Sbjct: 486 NLSEAKTKALLEQAGVPTPQGVVARSPAEAAQAFRNVGNGKAVMKIVSAA---------I 536

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYL 120
                 GGVR+  + +       E + +  +          ++ V VE        E  +
Sbjct: 537 THKTDIGGVRLGIASEGAAMAAYEEIHANGVKACDAAQ---IDGVLVEPMLPSPFVEAVV 593

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
            +  D   G V       GG+ IE       + +          +T      L       
Sbjct: 594 GIHRDPVFGHVCTFG--LGGVSIELFKDVSRRLLPLTPASAREMITETRCYELLKGYRGQ 651

Query: 180 QGQARIDGGDLFPNLYKAFCDKDM---SLLEINPLIIMKNGR-LRVLDSKISF 228
                    D+   L   F  K       LEINPL +   G+ +  LD+ +SF
Sbjct: 652 PAFDIDALVDMLVKLSD-FVGKHAARIEELEINPLAVRPQGQGVAALDAVLSF 703


>gi|170579976|ref|XP_001895063.1| ATP-citrate synthase-like protein [Brugia malayi]
 gi|158598125|gb|EDP36090.1| ATP-citrate synthase-like protein [Brugia malayi]
          Length = 204

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 22/209 (10%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V+K       RGK    +             +L  +     E+   ++   Q G T   +
Sbjct: 3   VIKPDQLIKRRGKLGLVK-----------CGNLSVLREWFNEMKDKSI---QIGKTVGTL 48

Query: 104 NCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
               +E   +     E+Y++++  R   ++ F     GG+D+  +     +    + +D 
Sbjct: 49  QNFILEPFCNHSDSDEMYIAIISRREDDVILFY--EHGGVDVGNIDDKARKLHIPIDLDK 106

Query: 162 LIG-VTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
             G ++ +D+ SL    E Q    +        LY  + +   + LEINP +++ N ++ 
Sbjct: 107 QSGSISDDDLESLIGPNESQKLLLLK--TFVKALYHVYKENYFTYLEINPFVLVNN-KIY 163

Query: 221 VLDSKISFDDNALYRHLDIQELRDVSEED 249
           +LD     D+ AL+   +  + R+    D
Sbjct: 164 ILDLAAKLDETALFLCSENWKTRNGEPID 192


>gi|300980469|ref|ZP_07175016.1| hypothetical protein HMPREF9553_01584 [Escherichia coli MS 200-1]
 gi|300307771|gb|EFJ62291.1| hypothetical protein HMPREF9553_01584 [Escherichia coli MS 200-1]
          Length = 66

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGGRGKGR 58
          MN+HEYQAK+LL    +P  K + I  +     A + +  P    V+K+Q+HAGGRGK  
Sbjct: 1  MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKAG 60

Query: 59 FKEL 62
            ++
Sbjct: 61 GVKV 64


>gi|330503667|ref|YP_004380536.1| CoA-binding domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328917953|gb|AEB58784.1| CoA-binding domain protein [Pseudomonas mendocina NK-01]
          Length = 707

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 85/238 (35%), Gaps = 44/238 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  +  + V +  V++S   A  A + L  P+ V+K             K L     
Sbjct: 483 AKALFSQVGLRVPQSRVVASREEAVQAARELEHPV-VLKV---------LDAKLLHKSDI 532

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV +  +  ++ +   ++     +T+ TG  G R +   VE       EL L    D  
Sbjct: 533 GGVALHQTADTIGARFDKM-----VTEVTGHVGYRPDRFLVEAMVAGGHELILGANRDAL 587

Query: 128 SGMVAF----------------IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
              +                  +   QGG+ +E+      Q I   L+D   G    D  
Sbjct: 588 GTTILLGAGGVTAELYKDTALRMLPEQGGLTLEQAHLMMQQLITWPLLDGYRGSKRRDTE 647

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISF 228
           +L                 F  L  AF ++ +   EINPL ++  G+ +   D+ +  
Sbjct: 648 ALA-----------QAIVNFSALVAAFGER-LVTAEINPLFVLPEGQGVVAADAVLVL 693


>gi|218778225|ref|YP_002429543.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218759609|gb|ACL02075.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 709

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 25/228 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+QAK +L  Y +PV+   + SS   A  A ++L  P+ +         + +    +L
Sbjct: 505 LDEFQAKRILADYGIPVSPESLASSRDDAVQAAESLGYPVVIKACSPDILHKTEKGLVKL 564

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       + +        I        Q G  G  V    V     + RE    +
Sbjct: 565 NLG---------NPQEAAEAYDAI--------QEGAPGVPV---IVGKMLPVQREFMAGI 604

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
              R  G    +    GG+  E +     +       + L  + S   + L D     G 
Sbjct: 605 T--RFEGYPPCVLFGMGGVLAEALKDFSLRLAPMTQAEALAMIDSLKSSVLLDDFRNMGA 662

Query: 183 A-RIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
             R     +  NL Y A    ++  +++NP++IM +G+    D+ I  
Sbjct: 663 VDREALASMLVNLGYLAMDFPEIKEIDLNPILIM-DGKPVAADALIVL 709


>gi|149179619|ref|ZP_01858134.1| succinyl-CoA synthetase, beta subunit [Planctomyces maris DSM
          8797]
 gi|148841543|gb|EDL55991.1| succinyl-CoA synthetase, beta subunit [Planctomyces maris DSM
          8797]
          Length = 42

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/41 (53%), Positives = 24/41 (58%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
          MNIHEYQAK LL KY + V  G    +V  A    K LPGP
Sbjct: 1  MNIHEYQAKELLAKYGIAVPAGHAAMTVEEAVEGAKKLPGP 41


>gi|62321488|dbj|BAD94933.1| hypothetical protein [Arabidopsis thaliana]
          Length = 181

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 17/151 (11%)

Query: 245 VSEEDSREIEAKQH---NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAP--ANFLDV 299
            +E     ++ K       + +   G I  MV G G ++   D +   G A    N+ + 
Sbjct: 3   PTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 62

Query: 300 GGGADQDKVAAAFKII----TSDSSVKGILINIFGGIMRCDVLV---KGILSAVKEVKIN 352
            G   +D+V    +++    T++   K   + I GGI     +     GI+ A+KE +  
Sbjct: 63  SGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKEKEAK 122

Query: 353 IP-----LVMRLEGANVDIGNRLIAESGLNV 378
           +      + +R  G N   G   +   G ++
Sbjct: 123 LKAARMHIFVRRGGPNYQKGLAKMRALGDDI 153


>gi|257388337|ref|YP_003178110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Halomicrobium mukohataei DSM 12286]
 gi|257170644|gb|ACV48403.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Halomicrobium mukohataei DSM 12286]
          Length = 699

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 80/227 (35%), Gaps = 21/227 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P  +G V+ S   A+S  +++     V+K               L    
Sbjct: 486 EAMDLLDAYGIPTPEGEVVDSPSEAQSVAESIG-DEVVMKIV---------SPDILHKSD 535

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            GGV V  S + V     ++    ++  +     + +  V V++  D+    E  L +  
Sbjct: 536 IGGVEVGVSPEDVWDTYEDL----VVRARNYQQDATILGVQVQEMLDVDAGTETILGVNR 591

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQA 183
           D   G +       GG+ +E +     +       D    +   E    L          
Sbjct: 592 DPQFGPLVLFG--LGGIFVEVLEDTTLRVAPVSEPDARSMLDDIESAPLLRGARGRDPVD 649

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFD 229
                +    L +   +    + L+INPL+   +G +  +D +++ D
Sbjct: 650 EDALVETIQRLSQLVTEFPAIVELDINPLVATNDG-VAAIDLRLTLD 695


>gi|224371672|ref|YP_002605836.1| putative acyl-CoA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223694389|gb|ACN17672.1| putative acyl-CoA synthetase [Desulfobacterium autotrophicum HRM2]
          Length = 724

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 63/347 (18%), Positives = 114/347 (32%), Gaps = 30/347 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  AK LL+ Y VP+   +  S +  A +A + +  P+ V+K                
Sbjct: 18  LNERDAKQLLKSYGVPMVMEMTASDIETALAAAQKMGYPV-VLK---------GYGTTLQ 67

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
               +G V +     +SV             T      GS +  + ++      RE    
Sbjct: 68  HKTERGLVHLNLCDAESVRMAA---------TSIMTEAGSELEGLLIQPCLTGQREFVAG 118

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCDMLELQ 180
           +  D+  G V       GG+  E V     +     LID    +   +  A L       
Sbjct: 119 MFRDQLFGPVVMFG--LGGVFTEAVHDVSLRLAPLSLIDAGEMLNEINAQAMLGRFRGEA 176

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
           G  R    D+   L +   +K D++ ++INPLI    GR+  +D+ + F      ++  I
Sbjct: 177 GVDRNSIKDILMGLSRLAMEKPDIAEIDINPLIADATGRITAVDALVCF--REKEKNTGI 234

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDV 299
               D    +          +   +  G  G ++  + L+      + +     A   D 
Sbjct: 235 TSPVDYRRINRFFYPESIAFVGASSTFGKWGYLLPLSTLSWDYKGKVYMVNPTGATLFDQ 294

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILINI----FGGIMRCDVLVKGI 342
            G      +     +         +L  I      GI    ++  G 
Sbjct: 295 TGYPKVTDIPGPVDLAVVTIPAARVLDLIPQFKAKGIKNMLLITSGF 341


>gi|270208663|ref|YP_003329434.1| hypothetical protein pSmeSM11ap136 [Sinorhizobium meliloti]
 gi|76880937|gb|ABA56107.1| conserved hypothetical protein [Sinorhizobium meliloti]
          Length = 899

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 90/255 (35%), Gaps = 26/255 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           ++E +AKA++  Y +PV   V+  S   AE    +L    P  VVK           +  
Sbjct: 489 LNEPEAKAVIAAYGIPVPPTVIAKSPKEAEGIAGSLLASAPRIVVK--------LISKSI 540

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  G V    +  +       I+        T           +E       EL L
Sbjct: 541 THKSDVGGVVLDVLTPLAAREAAEGIVARLEAHDPTAVVDGFAVQPMIERR--HSWELLL 598

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
            +  D   G V    S  GG+ +E VA      +    +D ++     D   +  +L   
Sbjct: 599 GVTRDPIFGPVILFGS--GGVSVEVVADT---AVALPPLDAVLAGDLIDETRVGKLLAGF 653

Query: 180 QGQARIDGGDL---FPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           + +   D   +      L +   D    L ++INPL+    G +  LD +I  D  A+ R
Sbjct: 654 RSEPPADRATICRALTALSQLIVDFPCVLSMDINPLVASAEG-VIALDVRIEIDPRAVTR 712

Query: 236 ---HLDIQELRDVSE 247
              + D+      SE
Sbjct: 713 PGPNPDLAIRPYPSE 727



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 35/186 (18%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD-----IIKLY 289
           R   + EL D +E  +R    ++           +  + NG G  +  +D        L 
Sbjct: 274 RIEGLGELFDATETVARFPPLERS---------RVAIVTNGGGAGVLAVDRLMDFACALA 324

Query: 290 GGAP----------------ANFLDVGGGADQDKVAAAFKIITSDSSVKG-ILINIFGGI 332
             +P                AN +D+ G A  D+   A +II  D  V   I++N   G+
Sbjct: 325 DLSPETIRALDRVLPANWSRANPVDIIGDAPPDRYQTAIEIIAQDPEVDILIIMNCPTGL 384

Query: 333 MRCDVLVKGILSAVKEVKIN-IPLV-MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
                  + + S  +   I+  P++   L G     G  ++ ++GL   +     D A  
Sbjct: 385 ASPVDAARAVASLARSGTISEKPVLTCWLGGRTAREGRHVLQQAGLP--SYDTPSDVALA 442

Query: 391 IVHAVK 396
             +  K
Sbjct: 443 ASYLAK 448


>gi|85860014|ref|YP_462216.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB]
 gi|85723105|gb|ABC78048.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB]
          Length = 773

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 23/224 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E+Q+K L   Y +PV +GV + S   A +A++ + G   V+K+         G     
Sbjct: 65  LNEWQSKTLFAAYGIPVPEGVPVKSETEAAAAVEQIRG-RAVLKA--------IGTDIHH 115

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             ++   V      +   +  R      L  +  G     +  V VE      REL + +
Sbjct: 116 KTEAGLVVLGVEDPEEAAATYR-----LLKKRAAGA----LEAVLVEQMVAGNRELMVGM 166

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G V       GG+  E +             D           SL         
Sbjct: 167 KRDPVFGPVVAFG--LGGVLAEALGDVVLALAPMDDWDAAELPDLIKARSLLGSFRGFPP 224

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDS 224
             R+    +   + +   D   ++ +++NP ++++ G+   +D+
Sbjct: 225 VDRVALAKILQAIGQIAIDHPRIAEIDVNP-VLVRGGQPVAVDA 267


>gi|23009910|ref|ZP_00050784.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 53

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/51 (60%), Positives = 36/51 (70%)

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +K +     LV+RLEG NV+ G  +I  SGLNVI A DLDDAAQKIV AVK
Sbjct: 1   MKPLASKCRLVVRLEGTNVEEGKEIIRTSGLNVIPADDLDDAAQKIVAAVK 51


>gi|292491665|ref|YP_003527104.1| CoA-binding protein [Nitrosococcus halophilus Nc4]
 gi|291580260|gb|ADE14717.1| CoA-binding domain protein [Nitrosococcus halophilus Nc4]
          Length = 895

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 36/238 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E QAK +L  Y +PV    V  +   A+   + L  P+  +K                
Sbjct: 491 LSEPQAKEILAAYGIPVVATRVAKTPEEAQQMAQELGFPV-ALKI--------LSPDISH 541

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
            +D  G V    + ++V S+   IL       Q     +++    V++ A      EL +
Sbjct: 542 KSDVGGVVLDLETPEAVQSEAERILRRL----QELRPEAQLEGFTVQEMAHRPGAHELLI 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEE---------VAKDYPQKIFKLLIDPLIGVTSEDVA 171
               D   G V         ++I +           +   + I +  +            
Sbjct: 598 GATTDPIFGPVILFGQGGTAVEIIQDRAVALPPLNMRLAQELISRTRV----------AK 647

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            L    +     +     +   + +   D  +++ L+INPL+    G +  LD+++  
Sbjct: 648 LLAGYRDRPAADQEAIARVLIQIAELMADIPEITELDINPLLADDKG-VLALDARMGI 704



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 28/151 (18%)

Query: 263 IALDGN-IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + + GN +  + NG G  +   D + L  G  A                     N +D+ 
Sbjct: 297 LPMKGNRLTILTNGGGPGVMATDAVALADGQLATLSEKTIQQLDQVLPPTWSHGNPVDII 356

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFG--GIMRCDVLVKGILSAVKEVKINIPLVMR 358
           G A  ++   A KI+ +D     IL+ I     I+  D + + I++ VKE K N+ L   
Sbjct: 357 GDAPAERYVKALKILLNDPQSDAILL-IHAPTAIVPSDHIAEAIVTVVKEAKRNV-LTCW 414

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           L G  V+    + A + +   T    ++A Q
Sbjct: 415 LGGEAVEKARDIFARADIP--TYGTPEEAVQ 443


>gi|289803980|ref|ZP_06534609.1| succinyl-CoA synthetase subunit beta [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 36

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI 35
          MN+HEYQAK L  +Y +P   G   ++   AE A 
Sbjct: 1  MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAA 35


>gi|119629181|gb|EAX08776.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_b
          [Homo sapiens]
          Length = 137

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
          +++HEY +  LL++  V V KG V  S   A +  K L   
Sbjct: 53 LSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGTE 93


>gi|305663978|ref|YP_003860266.1| acetyl-CoA synthetase (ADP-forming) beta subunit ;branched-chain
           acyl-CoA synthetase (ADP-forming) beta subunit
           [Ignisphaera aggregans DSM 17230]
 gi|304378547|gb|ADM28386.1| acetyl-CoA synthetase (ADP-forming) beta subunit ;branched-chain
           acyl-CoA synthetase (ADP-forming) beta subunit
           [Ignisphaera aggregans DSM 17230]
          Length = 232

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 88/230 (38%), Gaps = 18/230 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A  +L +Y  PV K  +  S   A     ++  P+ V+K               
Sbjct: 17  KLLEHEAYEILSEYKFPVPKFGLAKSEEEAVKIADSIGYPV-VLKIV---------SPDI 66

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           +     GGV +  +LK   SD+RE     ++  +     +R+  V +++      E+ + 
Sbjct: 67  VHKSDVGGVII--NLKD-SSDVREGFRKIMLNVRNRAPNARIEGVLIQEMVPQGLEIIVG 123

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
              D   G +       GG+ +E +     +      ID  + +       + +      
Sbjct: 124 STRDTIFGPIVMFG--LGGVFVEVLRDVSFRVAPITPIDADMMIRELKAYKILEGYRGSP 181

Query: 181 GQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +      D+         + +++  +++NP+++ + G+  ++ D++I  
Sbjct: 182 PRDLDAVKDILIKTSNIMLEVEEIQDIDLNPIMLFERGKGAKIADARIML 231


>gi|189218038|ref|YP_001938680.1| acyl-CoA synthetase (ADP forming) alpha and beta chain
           [Methylacidiphilum infernorum V4]
 gi|189184896|gb|ACD82081.1| Acyl-CoA synthetase (ADP forming) alpha and beta chain
           [Methylacidiphilum infernorum V4]
          Length = 908

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 31/241 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EYQ+K +L  Y + V +  +  S   A    + +  P+           +        
Sbjct: 500 LTEYQSKKILNCYGIEVNETYLAQSAEEALLIAEEIGYPVVA---------KLNSSRVTH 550

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLI-TKQTGPTGSRVNCVYVEDGADILRELYLS 121
            +D  G +   S  +S+     +I  +TL  + +    G  V  +  E G     EL L 
Sbjct: 551 KSDIGGVILGISDRESLKRAFEKIRENTLKQSTENAFEGITVQKMISEKGL----ELILG 606

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA---SLCDML- 177
             VD   G V    S  GG+ +E            L + PL  V S  +     +     
Sbjct: 607 GSVDPQFGPVLLFGS--GGVFVEIYQDRA------LALPPLTTVLSSILVERTKIAKAFD 658

Query: 178 ---ELQGQARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               +    +    +      +    +  +  +++NPL +  N R+  LD+++     ++
Sbjct: 659 GFRGIPPVEKKRLNETLVRFSELLVNEPRIKEIDVNPLFVYGN-RVMALDARVILHPFSI 717

Query: 234 Y 234
            
Sbjct: 718 D 718


>gi|326332439|ref|ZP_08198715.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1]
 gi|325949752|gb|EGD41816.1| acetyltransferase, GNAT family [Nocardioidaceae bacterium Broad-1]
          Length = 763

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 69/241 (28%), Gaps = 25/241 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A+ LL  Y + V   V+      A  A + +  P+ VVK       R       L    
Sbjct: 539 DARQLLAAYGIGVLPSVLADGAEEAVDAAEWVGYPV-VVKVADPVAHRTDVGGVRLGL-- 595

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                   S   V     E+LG           G  V             EL   +  D+
Sbjct: 596 -------RSPDEVRRAAHELLG-----IAAERPGLLVQR-----QVPAGVELIAGVTQDK 638

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIF-KLLIDPLIGVTSEDVASLCDMLELQGQARI 185
             G +  +    GG+  E +                           L            
Sbjct: 639 VFGPLVMVG--YGGVYTELIEDRSFLLTPLCRADAAAAIADLRTAPLLAGYRGAPAADAA 696

Query: 186 DGGDLFPNLYKAFCDKDMS-LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               L   L +   D      +++NP+I+ + G + V+D+K+     A     D++ LR 
Sbjct: 697 AVEHLLVCLGRLADDLPAVAEIDLNPVIVHERG-VSVVDAKVRLHPAAQAPDPDLRSLRP 755

Query: 245 V 245
            
Sbjct: 756 P 756


>gi|329765691|ref|ZP_08257260.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137757|gb|EGG42024.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 705

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 31/247 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +K +L+ Y V V    +++S   A    K +  PL   VV  QI                
Sbjct: 24  SKTILKTYGVKVPPFALVTSAEEAAKQAKKIGFPLVMKVVSPQIL------------HKT 71

Query: 66  SKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             GGV+V   ++  V    +++ G       +   G  V  + +E       EL + +  
Sbjct: 72  DVGGVKVGLDNVNDVKKTFKDMYGRL-----SKKKGVEVKGILLEKMVPKGVELIVGIQN 126

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G    +    GG+  E +     + +     D    +     ++L           
Sbjct: 127 DPQFG-PVIMVGL-GGIMTEVMKDVAFRMLPISTSDAKSMLNELKGSALLKGFRGSDPID 184

Query: 184 RIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDSKISFD-----DNALYRH 236
                 +   + K   +    ++ ++ NP+++       V D+KI  +     D+     
Sbjct: 185 TNMVAQMLVQIGKLGVENADYINSIDFNPVVVYPKSHFVV-DAKIILNKEIRKDSISKAK 243

Query: 237 LDIQELR 243
            +I+ + 
Sbjct: 244 PNIESME 250


>gi|9502268|gb|AAF88064.1|AF286346_1 acetyl-CoA synthetase [Entamoeba histolytica]
          Length = 713

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 34/237 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           EY+ K +  KY +P+ KG+   S+   A +    +  P+ +                 + 
Sbjct: 485 EYEGKMMFSKYGIPI-KGMAKASTEDEAVAEAMKIGTPVVM----------KILSPDIMH 533

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               GGV+V+ + +    +IR+     + + +     +R++ V +E       E  +   
Sbjct: 534 KTDVGGVKVKLTTEE---EIRKAYRDIMTSVKEKKPEARIHGVLLEKMVGFKYECIIGCK 590

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE----DVASLCDML-- 177
            D   G    +    GG+ +E                P IG+       D   +  +L  
Sbjct: 591 KDPLFG-PVIVF-GMGGVTVELYKDTNIAL-------PPIGLQEADRLIDGTKISKLLRG 641

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              +          +     K   D  ++S ++INPL +       VLD+KI  D N
Sbjct: 642 YRGMPACDVEGLKKILVQFSKMIMDFPEISEVDINPLAVSYE-EFLVLDAKIVLDKN 697


>gi|167383747|ref|XP_001736656.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165900837|gb|EDR27069.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 713

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 34/237 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           EY+ K +  KY +P+ KG+   S+   A +    +  P+ +                 + 
Sbjct: 485 EYEGKMMFSKYGIPI-KGMAKASTEDEAVAEAMKIGTPVVM----------KILSPDIMH 533

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               GGV+V+ + +    +IR+     + + +     +R++ V +E       E  +   
Sbjct: 534 KTDVGGVKVKLTTEE---EIRKAYRDIMTSVKEKKPEARIHGVLLEKMVGFKYECIIGCK 590

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE----DVASLCDML-- 177
            D   G    +    GG+ +E                P IG+       D   +  +L  
Sbjct: 591 KDPLFG-PVIVF-GMGGVTVELYKDTNIAL-------PPIGLQEADRLIDGTKISKLLRG 641

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              +          +     K   D  ++S ++INPL +       VLD+KI  D N
Sbjct: 642 YRGMPACDVEGLKKILVQFSKMIMDFPEISEVDINPLAVSYE-EFLVLDAKIVLDKN 697


>gi|67481881|ref|XP_656290.1| acetyl-CoA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56473479|gb|EAL50904.1| acetyl-CoA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 713

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 34/237 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           EY+ K +  KY +P+ KG+   S+   A +    +  P+ +                 + 
Sbjct: 485 EYEGKMMFSKYGIPI-KGMAKASTEDEAVAEAMKIGTPVVM----------KILSPDIMH 533

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               GGV+V+ + +    +IR+     + + +     +R++ V +E       E  +   
Sbjct: 534 KTDVGGVKVKLTTEE---EIRKAYRDIMTSVKEKKPEARIHGVLLEKMVGFKYECIIGCK 590

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE----DVASLCDML-- 177
            D   G    +    GG+ +E                P IG+       D   +  +L  
Sbjct: 591 KDPLFG-PVIVF-GMGGVTVELYKDTNIAL-------PPIGLQEADRLIDGTKISKLLRG 641

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              +          +     K   D  ++S ++INPL +       VLD+KI  D N
Sbjct: 642 YRGMPACDVEGLKKILVQFSKMIMDFPEISEVDINPLAVSYE-EFLVLDAKIVLDKN 697


>gi|126179647|ref|YP_001047612.1| CoA-binding domain-containing protein [Methanoculleus marisnigri
           JR1]
 gi|125862441|gb|ABN57630.1| CoA-binding domain protein [Methanoculleus marisnigri JR1]
          Length = 680

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 86/233 (36%), Gaps = 18/233 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++  LL++Y VPV +  ++ +V  A      +  P+ V+K             + +
Sbjct: 6   LSEFESYDLLKQYGVPVPEHAIVKTVAEAGKMADKIGFPV-VMKIH---------SPQIV 55

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV V  S K       E     +   +     + +  V VE  A    EL +  
Sbjct: 56  HKSDAGGVIVSISSKQA---AEEAFNKIVANAKAYNPEAEIKGVIVEQQAAPGLELIIGG 112

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G V       GG  +E +     + +     +  + V       +       + 
Sbjct: 113 KTDPAFGKVLTFG--MGGTLVELMKDVTLRILPVSEEEIRVMVREIHGYPMIQGYRGSKP 170

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
           +       +   + + F +  ++   +INP+ + ++G   V D++I  DD A+
Sbjct: 171 RDEETLVQVMWAINRFFAENTNVVEFDINPVRLYESGACIV-DARIFIDDEAV 222


>gi|218780519|ref|YP_002431837.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218761903|gb|ACL04369.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 729

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 75/224 (33%), Gaps = 22/224 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL +Y VPV +  +  S   A    +    P+ V+K      G       E+
Sbjct: 18  LTESESKALLAEYGVPVVEEKIADSPEKAGELAEETGFPV-VLK----GLGESLTHKSEM 72

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              + G         SV +  R++          G  G  +    V+      RE    L
Sbjct: 73  GLVAVGLA----DKDSVAASARDM---------KGRAGDALEGFLVQPLVRGDREFVAGL 119

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D   G V       GG+  E ++    +       D            L      Q  
Sbjct: 120 FTDPVFGPVVMFG--LGGVFTEALSDVVFRLAPCSEKDLETMPDEIQAKKLLGDFRGQAA 177

Query: 183 ARIDGG-DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDS 224
           A      +    L +   D   ++ ++INPL I  +G +  +D+
Sbjct: 178 ADKQAILNALAGLSRLVQDNPQVAEVDINPLKIGPDGAVTAVDA 221


>gi|23012766|ref|ZP_00052772.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 52

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 37/46 (80%)

Query: 349 VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           +KI++PLV+RL G NV+ G +++AESGL++ITA  L DAA+K V A
Sbjct: 1   MKIDVPLVVRLAGTNVEAGQKILAESGLDLITAETLTDAARKAVEA 46


>gi|302343108|ref|YP_003807637.1| ATP-grasp domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639721|gb|ADK85043.1| ATP-grasp domain protein [Desulfarculus baarsii DSM 2075]
          Length = 231

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 79/226 (34%), Gaps = 23/226 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E+++K  L  + VPV+   +  S   A    + L  P+ +         + +G +  L
Sbjct: 18  LNEHESKLALAAHGVPVSAEGLAQSADQAVELARELGFPVALKACAASLMHKSEGGWVRL 77

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               +  VR                    I  +    G  ++ V V++     REL L L
Sbjct: 78  GLGDETAVRAAYDD---------------IAGRAARAGLALDGVLVQEMVGGNRELVLGL 122

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA---SLCDMLEL 179
             D   G    +    GG+  E +A    +      ++ L  +  E +     L      
Sbjct: 123 SRDPQFGPCVMLG--LGGVLAEALADTVFRMAPLERLEVLDML--EQLRCRPMLAAFRGQ 178

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDS 224
                         L +   + D  + +++NPLII   GR++ +D 
Sbjct: 179 SPADLEALCAAVIGLGRLGLEHDAVVEVDVNPLIITARGRVKAVDG 224


>gi|159041658|ref|YP_001540910.1| hypothetical protein Cmaq_1092 [Caldivirga maquilingensis IC-167]
 gi|157920493|gb|ABW01920.1| conserved hypothetical protein [Caldivirga maquilingensis IC-167]
          Length = 233

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 77/230 (33%), Gaps = 18/230 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + +++A  LL  Y +P     V+S+   A  A   +  P+ +         +       
Sbjct: 16  KLLDHEAYELLEAYGIPTPGYRVVSNYEEAIKAANEVGYPVAI---------KVISPDIM 66

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
              D  G +   +S   V     E+  +     +     +RV    V+       E+ + 
Sbjct: 67  HKTDVGGVILNVNSDDDVKRACGEMTNNI----KHLAPYARVFGFLVQHMVQGGLEVIVG 122

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQ 180
            L DR  G V       GG+  E       +       D L  +       L      + 
Sbjct: 123 GLRDRIFGTVILFG--IGGVLTELYKDTSMRVAPITEDDALSMIKETKAYQLMIGYRGMP 180

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +      D+     +   +   +S  ++NP+I+++NG+    +D++   
Sbjct: 181 RRDIYSLVDIIVKFSRLMIENPQISEADLNPVIMLENGKGSYAVDARFII 230


>gi|11499522|ref|NP_070763.1| hypothetical protein AF1938 [Archaeoglobus fulgidus DSM 4304]
 gi|2648606|gb|AAB89317.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 673

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 24/245 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+++KALL KY +  AK +   +   A  A K +  P+      +   GR      
Sbjct: 1   MLLLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVV-----MKVAGREIVH-- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  G +    S   V    + ++        + P    VN   ++   +   E+ +
Sbjct: 54  --KSDVGGVILNVKSEDEVREVFQRLM--------SIPKAEGVN---IQPQLEKGIEVIV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  +   G VA      GG+ +E +     + +     D    V       L +     
Sbjct: 101 GVAENEQFGSVAMFG--LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRRV 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
                   DL   L +    + +  +++NP+ + + G +   D++I   +   +    I 
Sbjct: 159 KGDVGAVVDLLLKLNEVVERESIVEMDLNPVFVYERGAVVA-DARIVVGERKRF-DYTIP 216

Query: 241 ELRDV 245
           +LRD+
Sbjct: 217 DLRDL 221


>gi|73537537|ref|YP_297904.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72120874|gb|AAZ63060.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 725

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 37/240 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+A  LL +  VPVA   +      A    + L  P+ V               + L
Sbjct: 501 LSEYEAMRLLAEAGVPVAPHDLARDAEEAVRIAERLGYPVVV----------KLCSREIL 550

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV--NCVYVEDGADILRELYL 120
                GGV +  +    + D    +   +   +T   G+ V  + V V        E+ +
Sbjct: 551 HKSDVGGVALNLANAQAVRDAFGRMAQAVAGLRTD-KGTPVALDGVLVARMVRGWGEVMV 609

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM---- 176
            +  D   G+VA      GG  +E         IF+     L  ++ E   ++       
Sbjct: 610 GVRRDPVFGLVALAG--IGGTAVE---------IFRQTACGLAPLSREQARAMLHASRVA 658

Query: 177 ------LELQGQARIDGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNGRLRVLDSKISF 228
                              +  ++ +   +    +  +EINP I+   G L   D+ ++ 
Sbjct: 659 ALCEGHRGHPQVDLNAAAQVLASVSQLAAELGDRLDTIEINPFIVTAPG-LVAADAVVTL 717


>gi|291300927|ref|YP_003512205.1| CoA-binding domain-containing protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570147|gb|ADD43112.1| CoA-binding domain protein [Stackebrandtia nassauensis DSM 44728]
          Length = 898

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 44/248 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           ++ LL  Y +P  +    +SVH A +A   +  P+  +K+              +    +
Sbjct: 680 SRGLLASYGIPHVETRFATSVHEAVAAADAIGFPV-ALKAD---------DPTMVHKTER 729

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           G V +     + +      +G+ L T         V  V V+       EL   +  DR 
Sbjct: 730 GAVHLGLDSAAAVKSAYLAIGNALHTS--------VPRVAVQPMVTGTVELIAGVTHDRQ 781

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---------- 177
            G V  +   +GG+  E    +  + +          +T  D   +   L          
Sbjct: 782 FGSVVMLG--RGGIQTELWDDNAFRLLP---------LTDLDARRMWRSLRTAPLLTGYR 830

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF---DDNAL 233
             Q        DL   L +   D  +++ L+INPL+    G L  +D K++    D  A 
Sbjct: 831 GSQPVDTYRLEDLMLRLARLAEDFPELAELDINPLLAGP-GLLAAVDVKVNVAATDTGAE 889

Query: 234 YRHLDIQE 241
           +    ++E
Sbjct: 890 WMLPTLRE 897


>gi|302342545|ref|YP_003807074.1| ATP-grasp domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639158|gb|ADK84480.1| ATP-grasp domain protein [Desulfarculus baarsii DSM 2075]
          Length = 228

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 81/226 (35%), Gaps = 27/226 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY +K +L  Y VPV + ++  S   A +A + L GP+ +         + +     L
Sbjct: 19  LSEYDSKKVLAAYGVPVTREILAGSADEAIAAAQVLGGPVALKACSAKLLHKTERGAVRL 78

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                  +          +         L+  +    G     V V++     REL + L
Sbjct: 79  GLRQPADI--------ARAFAE------LMALEPDLDG-----VLVQEMVSGARELVMGL 119

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D   G    +    GG+  E +A    +      I+       + +     +   +GQ
Sbjct: 120 KRDAQFGPCVMLG--LGGVLTEILADTAFRAAPIDAIEARD--MCDQLRGKAMLGAFRGQ 175

Query: 183 ARIDGGDL---FPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDS 224
           A  D   L      L +   D      +++NPLII  NGRL  +D+
Sbjct: 176 APADMDALCAALVGLGRIGLDLPAVSEIDVNPLIIDANGRLAAVDA 221


>gi|124485685|ref|YP_001030301.1| hypothetical protein Mlab_0863 [Methanocorpusculum labreanum Z]
 gi|124363226|gb|ABN07034.1| CoA-binding domain protein [Methanocorpusculum labreanum Z]
          Length = 707

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 30/254 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E     LLR++NVP     ++ +   A  A   +  P+   +V  QI           
Sbjct: 29  LSEADGYDLLRQFNVPAPAFEIVQTPDDAAKAATKIGYPVVMKIVSPQI----------- 77

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +     GGV V        ++ +E     + + +     + +  V VE+ A    EL +
Sbjct: 78  -IHKSDAGGVIVGIKTD---AEAKEAFNKIVTSAKAYDASAEIKGVIVEEMAKSGLELII 133

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
              +D   G V       GG  +E       + +     D    +    + +   +   +
Sbjct: 134 GGKIDPAFGRVLTFG--LGGTLVEFYKDVGIRLLPCDDEDIRSLI--HQIKAYTLIRGYR 189

Query: 181 GQARIDGGDLFPNLYKA--FCDKDMSLLE--INPLIIMKNGRLRVLDSKISFDDNALYRH 236
           GQA +D   LF  L  A  F +K+++++E  INPL + + G    +D+++   D  +   
Sbjct: 190 GQAPLDEEFLFQTLKNACDFFEKNVNVVEFDINPLRLYEKGG-CAVDARVIVQDEPV--- 245

Query: 237 LDIQELRDVSEEDS 250
            ++    D ++   
Sbjct: 246 -ELPAHYDPAKIVP 258


>gi|332664762|ref|YP_004447550.1| GCN5-like N-acetyltransferase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333576|gb|AEE50677.1| GCN5-related N-acetyltransferase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 890

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 95/258 (36%), Gaps = 50/258 (19%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + +++AKALL  Y +PV +GV+  +V  A +A K L  PL +       G +       L
Sbjct: 489 LLDHEAKALLAAYQIPVNRGVLCQTVDEAAAAGKQLGYPLALKLVSPDIGHKTDVGGVSL 548

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               +  +R+                +TL   +T   G+R   V VE       E+ +  
Sbjct: 549 HLQDENALRLA-------------FRNTLHNLETQRPGARAAGVIVEKMIYRPFEIIIGA 595

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G    +   +GG+ +E               D  +G+   ++A L   L     
Sbjct: 596 KKDPVFG-PVIVF-GRGGIAVEVFK------------DTQMGLPPLNMA-LAQRLIEGTR 640

Query: 178 ---------ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
                     L G    +   L         D  ++  +E+NPL+   NG + V D+ + 
Sbjct: 641 MYPLLRGYRGLPGSNLAELDYLLCKFSYLVMDFPEIKEIEMNPLLADANGGIVV-DATVV 699

Query: 228 FDDN------ALYRHLDI 239
            ++N        YRHL I
Sbjct: 700 LEENHLEQSGPEYRHLVI 717


>gi|254500447|ref|ZP_05112598.1| ATP-grasp domain family [Labrenzia alexandrii DFL-11]
 gi|222436518|gb|EEE43197.1| ATP-grasp domain family [Labrenzia alexandrii DFL-11]
          Length = 677

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 31/224 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+QAK  L  + + V K    +S   A    +++  P+ V+K Q              
Sbjct: 473 LSEHQAKQQLGAFGIRVPKSGTAASPEKAAEVAESVGFPV-VLKGQ----------GIAH 521

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLS 121
            +++   +   +S + V     ++                V    VE+       EL + 
Sbjct: 522 KSEAGAVILNLNSREDVEVAAGKM---------------PVGTFLVEEMVTGAQAELLIG 566

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQ 180
           ++ D   G V  IA+  GG+  E +       I     +    +    ++  L       
Sbjct: 567 IVKDPGHGHVLTIAA--GGVFTELLQDGVSLTIPANRREIEEALEHLKISKVLAGYRGRP 624

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
                   D    L        +   EINPL+  ++      D+
Sbjct: 625 ACDLPKVLDTIMALQDYVQSGTVEEAEINPLLCGQD-FAIAADA 667


>gi|327311346|ref|YP_004338243.1| ATP-grasp domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326947825|gb|AEA12931.1| ATP-grasp domain protein [Thermoproteus uzoniensis 768-20]
          Length = 231

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 75/228 (32%), Gaps = 18/228 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            ++E++A  LLRKY +PV    +      A S  + +  P+ V         +   R   
Sbjct: 14  KLYEHEAFELLRKYAIPVPDYGIAKDEDEAVSLAERIGYPVAV---------KVISRQIV 64

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
              D  G V   ++   +I+  ++I  S             +    ++       EL + 
Sbjct: 65  HKTDVGGVVLGVTNRDELIAACKKIRESVKARAPYAE----IEGCLIQRMVPQGVELIIG 120

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCDMLELQ 180
            + D   G V       GG+  E       + +     D    +        L       
Sbjct: 121 AVYDDIFGHVLAFG--LGGILTELYRDVSMRLVPIEEEDAWEMLREVKAYRLLTGYRGTP 178

Query: 181 GQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGR-LRVLDSKI 226
            +      D+     +   +       ++NP+I ++ G+   V+D++ 
Sbjct: 179 PRDLHAIVDIIVKFSRLLSENPAIREADLNPVIALEEGKGAYVVDARF 226


>gi|269793016|ref|YP_003317920.1| CoA-binding domain-containing protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100651|gb|ACZ19638.1| CoA-binding domain protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 699

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 83/236 (35%), Gaps = 35/236 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E+QAK +L+ + VPV    ++     A  A + +  P+   V+  QI    +      
Sbjct: 486 LTEHQAKQVLKAWGVPVTMEEMVRDPDEARVAAERIGYPVALKVMSRQIP--HKTDAGVV 543

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTL--ITKQTGPTGSRVNCVYVEDGADILREL 118
            L     G ++       V+   R + G+ L  +  Q   +G       VE    + R+ 
Sbjct: 544 ALNVKGPGELKEAFDR--VMDAARRVQGARLDGVLVQRMASG-------VECIVGVKRDP 594

Query: 119 YLSLLVDRTSGMVAF-----IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
               +V    G V       +A  +  +  EE  +         +  P  G    D    
Sbjct: 595 VFGPVVVFGLGGVLVEVLKDVAVRRAPVSPEEALEMIRSLRGYPIFGPFRGRGPLD---- 650

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISF 228
                     +    ++   +     D  +  L++NPL +M+ G+ +   D+ ++ 
Sbjct: 651 ----------QGAVAEVISRVSILAMDPRLLELDVNPLFVMEEGQGVVCADALMNV 696


>gi|148256413|ref|YP_001240998.1| acyl-CoA synthetase domain-containing protein [Bradyrhizobium sp.
           BTAi1]
 gi|146408586|gb|ABQ37092.1| putative Acyl-CoA synthetase domain protein [Bradyrhizobium sp.
           BTAi1]
          Length = 718

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 28/228 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+  K LL +  V V  G + +S   A      +  P+  +K+Q                
Sbjct: 506 EWVGKQLLARLGVRVPAGALATSPDDAARIAADIGYPV-ALKAQAATL---------AHK 555

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  + ++ +    + L   +   Q    G  ++   VE   +   EL +    
Sbjct: 556 SEVGGVLLNIADETALRAAWQRLHDNVARAQ---PGLVLDGALVEKMGERGLELVVGASR 612

Query: 125 DRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           D        +    G       D++ +A D P+            +     A L D    
Sbjct: 613 DAQ-WGPILMVGLGGIWVEALGDVQLLAPDLPRAAIIER------LRRLKAAKLLDGFRG 665

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDS 224
                     D+   L +      +++ ++INPL+    G+ +  LD+
Sbjct: 666 APPIDLDAVADVVALLGQLMLQYPEVTEVDINPLVAYGRGQGVVALDA 713


>gi|15921831|ref|NP_377500.1| hypothetical protein ST1537 [Sulfolobus tokodaii str. 7]
 gi|15622618|dbj|BAB66609.1| 659aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 659

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 28/227 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + +Y+A  L+  Y +   K  +  SV  A+    ++  P+ +               + +
Sbjct: 461 LRDYEAMKLMEIYGIRTPKWGIAESVEEAQRIADSIGYPVVM----------KISPDEPV 510

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV V      V     ++                   V +++  +   E+Y+  
Sbjct: 511 HKTEMKGVVVNVEKDQVKDVYSQL-------------SKITKRVMIQEQLN-GLEVYIGG 556

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           + D   G V  + S  GG+ +E V K+    +  +  D    +  E           +G 
Sbjct: 557 IRDPVFGHVVLVGS--GGIYVE-VLKNVAYGLSPIYEDEAQELLMESKIHAMLTARKRGY 613

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                     ++ +   D ++  ++INPL + + G    +D +I FD
Sbjct: 614 DENSLIRTIISVSRMIVDLNIREMDINPLFVNERGAF-AVDVRIVFD 659



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 29/142 (20%)

Query: 271 CMVNGAGLAMATMDIIKLYGGA---------------------PANFLDVGGGADQDKVA 309
            + N  G  + T D I+  G                       P N LD+ G A++++  
Sbjct: 296 VITNSGGHGVLTSDEIEKNGLRMVEIPDWMKETLRKILPPTSVPRNPLDLTGDANKERYY 355

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNR 369
           +A KI++  +S K +++     ++ C  + + I +   +  I I +     G + D   +
Sbjct: 356 SALKIVSELNSTKLVIVQAL-PMVSCTDVARVISNFKGKGVIGITM-----GLDEDTALK 409

Query: 370 LIAESGLNVITAIDLDDAAQKI 391
           ++  +G+   T    +DA + I
Sbjct: 410 ILETTGIPAYTFP--EDAVKAI 429


>gi|269124770|ref|YP_003298140.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM
           43183]
 gi|268309728|gb|ACY96102.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183]
          Length = 887

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 19/227 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           QA  LL  Y +P+A      +   A +A + L G +  +K+   AG   K     L    
Sbjct: 667 QAMELLEAYRLPMAPWRWARTEEEAVAAARKLGGSV-ALKAHA-AGVVHKTEAGALRLGL 724

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G   V  + + +     + L            G  V    V + AD   E+   ++ ++
Sbjct: 725 SGEAEVRRAHRELAERFGDAL-----------EGVLVQA-MVGERADDGVEVLAGVIQEQ 772

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQARI 185
             G V  +    GG+  E +     +      +D    +     A L             
Sbjct: 773 IFGPVVVLG--LGGVATEVLGDRCARMAPLTDVDAEELIDGLRAAPLLRGHRGRPPADLP 830

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              +    L +   D+ +++ L++NPLI   +G +  +D++I    N
Sbjct: 831 ALREALLRLSRLAADRPEIAELDLNPLIARPDG-VVAVDARIRLVPN 876


>gi|260654365|ref|ZP_05859855.1| CoA-binding protein [Jonquetella anthropi E3_33 E1]
 gi|260630998|gb|EEX49192.1| CoA-binding protein [Jonquetella anthropi E3_33 E1]
          Length = 704

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 81/226 (35%), Gaps = 24/226 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY AK LL KY +PV +  + +++  A  A   +  P  V+K        G         
Sbjct: 486 EYDAKCLLSKYGIPVTREALCTNMEEAFDAADDIGFP-LVLK--------GMSGKIMHKT 536

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           ++        +L+ +  D +++        Q     + +    V +      E  + +  
Sbjct: 537 EADVVRLDIRTLEELRQDFKKMR----TNMQAQVADADIQGFLVGEMVKGGMECIVGIKR 592

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G V  +    GG+ +E +       +    +D    +           L   +GQ 
Sbjct: 593 DPVFGPVVAVG--LGGIYVEVLGDVS---LRHAPVDEAEALRMIQELKGFGFLSGARGQK 647

Query: 184 RIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
           R D   L   + +    A  + D+  L+INP+ +M  G+     D+
Sbjct: 648 RKDTAALARIVSQVSKLACVEPDLLELDINPVFVMPEGQGAVAADA 693


>gi|119871999|ref|YP_930006.1| hypothetical protein Pisl_0485 [Pyrobaculum islandicum DSM 4184]
 gi|119673407|gb|ABL87663.1| branched-chain acyl-CoA synthetase (ADP-forming) beta subunit /
           acetyl-CoA synthetase (ADP-forming) beta subunit
           [Pyrobaculum islandicum DSM 4184]
          Length = 232

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 76/232 (32%), Gaps = 23/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRF 59
            + E +A ALL+ Y +P     +      A    + +  P+ V  V  QI          
Sbjct: 16  KLREDEALALLKAYGIPTPDFALARDEEEAVKLAEQIGYPVAVKIVSPQIV--------- 66

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                D  G +   S+ + V     +I    +I K        +  V ++       EL 
Sbjct: 67  --HKTDVGGVILGVSNEREVREACVQI--KEIIKKVPYAE---LEGVLIQKMVPKGVELI 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +  + D   G V       GG+  E       + +     D    +       +      
Sbjct: 120 IGTVYDEIFGHVILFG--LGGIYTEVYKDVSMRIVPITEEDAWEMIREVKAYRILTGYRG 177

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
           +  +      D+     +   +  ++   ++NP+I ++ G+   V+D++   
Sbjct: 178 MPPRDVAAVVDILVKFSRLVQENPEIREADLNPVIALEEGKGAYVVDARFIL 229


>gi|124028191|ref|YP_001013511.1| hypothetical protein Hbut_1337 [Hyperthermus butylicus DSM 5456]
 gi|123978885|gb|ABM81166.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 238

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 75/219 (34%), Gaps = 17/219 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A A+   Y +PV +  +      A    + +  P+ V+K               
Sbjct: 18  KLLEHEAYAVAEAYGLPVPRYGLARDPDEAARLSREIGFPV-VLKIV--------SPDIT 68

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +D  G +    S         +I+ +     +     +R+  V +++      E+ + 
Sbjct: 69  HKSDVGGVILDIRSEDDARKAFTQIIENV----KKHAPEARIAGVLIQEMVPSDLEVIVG 124

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
              D+  G    +    GG+ +E +     +      ID    +       + +      
Sbjct: 125 ATRDQIFG-PLLMFGL-GGIFVEVLKDVSFRLAPVTPIDAEEMIKEIKAYRILEGYRGKP 182

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR 218
            +      D+     K   +  ++  +++NP+++ + G+
Sbjct: 183 PRDIEALKDIIVKTSKLMLENPEIQDIDLNPIMVFEKGK 221


>gi|171060913|ref|YP_001793262.1| GCN5-like N-acetyltransferase [Leptothrix cholodnii SP-6]
 gi|170778358|gb|ACB36497.1| GCN5-related N-acetyltransferase [Leptothrix cholodnii SP-6]
          Length = 904

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 90/234 (38%), Gaps = 26/234 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +++PV + ++  S + A      L  P+  +K                
Sbjct: 493 LTEMESKALLAAFHIPVTRTMLARSANEAMLIASQLGYPV-ALKID--------SPDISH 543

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D +G      S  +V     ++L +          G+R+N V ++  A     RE+Y+
Sbjct: 544 KSDVQGVALNVVSATAVRDTYHDMLAAV----SRAQPGARINGVTIQPMAAKRRGREIYI 599

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            +  D   G         GG  IE +A    + +    ++  +     + A +   L   
Sbjct: 600 GMTTDDPFG-PVITF-GAGGTMIELIAD---RAMELPPLNQFLAHRLIERARVAATLDAW 654

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                        +   + +  C    +  ++INP+I+ ++G +  +D++I  D
Sbjct: 655 RGQPAVKLEAIEQVLLRVSEMVCALPQLREMDINPIIVDEDGAV-AVDARIVID 707


>gi|89056314|ref|YP_511765.1| acyl-CoA synthetase, putative [Jannaschia sp. CCS1]
 gi|88865863|gb|ABD56740.1| acyl-CoA synthetase putative [Jannaschia sp. CCS1]
          Length = 680

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 74/225 (32%), Gaps = 37/225 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E  AKALLR + V V K  + SS   A      L G +  +K+   A           
Sbjct: 477 ISEADAKALLRAHGVEVPKLGIASSPVQAAQVAAKLGG-VVALKAMGVA----------- 524

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                G VR+  +   V +  R+I                     +E+    +  EL + 
Sbjct: 525 HKSEVGAVRLNLTPPEVDAAARQI---------------PAQSFLIEEMIGGLAIELLIG 569

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L D   G+V  + +  GG   E +       +     D +  +    +     +   +G
Sbjct: 570 VLRDPAHGLVLTLGA--GGTLTELLNDTTHLLLPCTADDIIDALG--HLRIFPRLKGYRG 625

Query: 182 QARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRV 221
               D   +   +     Y      D+  +EINPL+      +  
Sbjct: 626 APHADLSAIASAVLAVQDYVTANAPDIFEVEINPLLCTPTHAVAA 670


>gi|88601867|ref|YP_502045.1| CoA-binding [Methanospirillum hungatei JF-1]
 gi|88187329|gb|ABD40326.1| CoA-binding protein [Methanospirillum hungatei JF-1]
          Length = 688

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 20/248 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +   LL KY +P  K  +++    A SA + +  P+ V+K                
Sbjct: 6   LSESEGYDLLSKYGIPTPKYRIVTRAEDAGSAAEAIGFPV-VMKI--------ISPDIVH 56

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+ G +    + +S  S   +I+ +     Q       ++ V VE+ A    EL +  
Sbjct: 57  KSDAGGVIVGIGTKESAQSAFNQIVANARAYNQNAD----IHGVIVENQAAPGLELIIGG 112

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D T G V       GG  +E +     + +     +    VT  D   L       + 
Sbjct: 113 KTDPTFGKVITFG--IGGTLVELMKDVTLRILPIDEDEIRKMVTDIDSYPLITGYRGSKP 170

Query: 182 QARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240
           +       +  N+ K F D KD+   +INP+ +  +G    +D++I  D++     LD+ 
Sbjct: 171 KDEECLIQIIKNVCKMFEDQKDLREFDINPIRLYDSG-ACAVDARIIMDNDIHL--LDVV 227

Query: 241 ELRDVSEE 248
           EL  +  E
Sbjct: 228 ELEPIPPE 235


>gi|73538616|ref|YP_298983.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72121953|gb|AAZ64139.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 741

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 81/222 (36%), Gaps = 18/222 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ KA L    + V +G + +S   A +    +  P+ V+K+Q           +    
Sbjct: 528 EYQGKAWLAAAGLTVPEGALATSADDATAIAARIGYPV-VIKAQA---------SELPHK 577

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV V  + ++ +    + L   + T +    G  ++ V VE       EL +    
Sbjct: 578 SDVGGVIVGLADEAALRAGWDRLQQNIATHR---PGLTLDGVLVEAMGPRGLELVVGARR 634

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D   G V  +    GG+ IE +             D +  +     ASL   +       
Sbjct: 635 DAGWGPVVLVG--LGGVWIEALKDVRLIPADLAEADVVQELGRLKAASLLRGIRGAAAVD 692

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDS 224
           +        L  A    + ++ EI  NPL+   + R+  LD+
Sbjct: 693 VAAIARAVTLIGAQMRANPAITEIDVNPLVAYPD-RVLALDA 733


>gi|254500981|ref|ZP_05113132.1| CoA binding domain protein [Labrenzia alexandrii DFL-11]
 gi|222437052|gb|EEE43731.1| CoA binding domain protein [Labrenzia alexandrii DFL-11]
          Length = 709

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 23/224 (10%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA+L    +PV + V+  S   A  A   + GP+ V+K               L     
Sbjct: 490 AKAILASAGIPVTRDVLTESAEEAVKAWHGIGGPV-VLKI---------ASPDILHKTEI 539

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV ++ + +  I++  E++ +     Q     + +  V V +      E  L +  D  
Sbjct: 540 GGVLIDLNDEQAIAEGFEVILNRAREAQ---PDATIEGVLVCEMVSGGVETVLGVTND-P 595

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           +   A +    GG+ +E V KD   ++    ID    +  E +     +  ++G    D 
Sbjct: 596 ALGPAVMFGL-GGVFVE-VMKDVTFRLAPFGIDEAHRMIGE-IKGRAMLDGVRGAPPADV 652

Query: 188 GDLFPNLYK--AFCDKDMSLLE---INPLIIMKNGRLRVLDSKI 226
             L   L +   F  ++   LE   INP +++ +  +  LD+ I
Sbjct: 653 KALAQALSRLSVFAAENADRLETIDINPFVVLPDSAV-ALDAVI 695


>gi|218783011|ref|YP_002434329.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764395|gb|ACL06861.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 725

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 86/240 (35%), Gaps = 36/240 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E ++K LL  Y +PV +  +++    A S  + +  P+ V+K             + 
Sbjct: 18  SLTEAESKILLSAYGIPVVEEAIVTEEDDAASQAQKIGFPV-VLKGH---------GARL 67

Query: 62  LPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                +G V+V   S   VI   R+I             G       ++   +  RE   
Sbjct: 68  THKTERGLVKVNLRSDFEVIQAYRQI---------KEAAGEDWEGCLIQPLIEGKREFAA 118

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------L 173
            L+ D   G         GG+  E +            I P     +E +         L
Sbjct: 119 GLVRDPQFGPTVMFG--LGGVFTEALGDA------TFRIAPFSETQAEVMLDEIKSSKLL 170

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                 +   R         L +   +  ++  ++INPLI+  +G+++ +D+ +  D+NA
Sbjct: 171 GAFRGEEKADRDALKQTLLGLARLGLEHPEIKEVDINPLIVTPDGKVKAVDALVVLDENA 230


>gi|11498792|ref|NP_070021.1| hypothetical protein AF1192 [Archaeoglobus fulgidus DSM 4304]
 gi|2649402|gb|AAB90053.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 664

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 82/228 (35%), Gaps = 23/228 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E+++KALL KY +  AK +   +   A  A K +  P+      +   GR      
Sbjct: 1   MLLLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVV-----MKVAGREIVH-- 53

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  G +    S   V    + ++        + P    VN   V+   +   E+ +
Sbjct: 54  --KSDVGGVILNVKSEDEVREVFQRLM--------SIPKAEGVN---VQPQLEKGIEVIV 100

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  +   G VA      GG+ +E +     + +     D    V       L +     
Sbjct: 101 GVAENEQFGSVAMFG--LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRGV 158

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                   DL   L +    + +  +++NP+ + + G +   D++I  
Sbjct: 159 RGDVGAVVDLLLKLNEVVERESIVEMDLNPVFVYERGAVVA-DARIVV 205


>gi|240102799|ref|YP_002959108.1| Acetyl-CoA synthetase (ADP forming), beta chain (acdB)
           [Thermococcus gammatolerans EJ3]
 gi|239910353|gb|ACS33244.1| Acetyl-CoA synthetase (ADP forming), beta chain (acdB)
           [Thermococcus gammatolerans EJ3]
          Length = 253

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 23/230 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y +PV +  +  ++  A    + +  P+   ++  QI             
Sbjct: 22  EYEAKQVLKAYGLPVPEEKLAKTLDEALKYAEEIGYPVALKLMSPQIL-----------H 70

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+K  +    S + +     EI  +     +     + +  V V       RE+ + +
Sbjct: 71  KSDAKVVMLNIKSPEELKQKWEEIHEN----ARKYRPDAEILGVLVAPMLRPGREIIIGV 126

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQG 181
             D   G         GG+ +E +     + I     D    +T      +       + 
Sbjct: 127 TEDPQFGHAIMFG--LGGIFVEVLKDVTFRIIPITERDARKMITEIKGYPILAGARGEEP 184

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
                  DL   + +   +    + E+  NP+ + + G+   ++D++I  
Sbjct: 185 ADIDAIVDLLLKVSQLVDELRDYIKEMDLNPVFVYEKGKGAVIVDARIIL 234


>gi|145592006|ref|YP_001154008.1| hypothetical protein Pars_1805 [Pyrobaculum arsenaticum DSM 13514]
 gi|145283774|gb|ABP51356.1| conserved hypothetical protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 233

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 23/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
            + E +A  LLR Y +PV    ++ +   A    + +  P+   VV  QI          
Sbjct: 16  KLREDEALTLLRAYGIPVPDFALVKNEEEAVKVAEAIGFPVVAKVVSPQIV--------- 66

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                D  G V   +  + V    R +    ++ +        +  V ++       EL 
Sbjct: 67  --HKTDVGGVVVGINDAQGVREACRRL--REVVKRVPYAE---LEGVLIQKMVPKGVELI 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +  + D   G V       GG+  E       + +   + D    V       L      
Sbjct: 120 VGAVYDEIFGHVVAFG--LGGIYTELYKDISMRVVPVDVEDVWEMVREVKAYRLLTGFRG 177

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
           +  +      D+     +   D  ++S  ++NP+I ++ G+   V+D++   
Sbjct: 178 MPPRDIPAVVDIVYKFSRLIEDNPEISEADLNPVIALEEGKGAYVVDARFIL 229


>gi|167044911|gb|ABZ09578.1| putative CoA-binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG8D22]
          Length = 318

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 75/228 (32%), Gaps = 26/228 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK++L+KY V V    + +S   A    K L  PL   VV  QI                
Sbjct: 24  AKSILKKYKVSVPGFSLATSADQAVRDAKRLGFPLVMKVVSPQIL------------HKT 71

Query: 66  SKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             GGV+V   ++  V     ++ G       +   G  V  + +E       EL + +  
Sbjct: 72  DVGGVKVGVDNIADVKKTFNDMYGRL-----SKKKGVNVKGILLEKMVPKGVELIVGIQT 126

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G    +    GG     +     + +     D    +     + +       +   
Sbjct: 127 DPQLG-PVIMVGL-GGTLTNLLNDVSWRMLPITTSDAKSMLNDLKGSKILKGFRGSKPID 184

Query: 184 RIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                     + K   D    ++ ++ NP+++       V+D+KI  +
Sbjct: 185 LNMLAKALVQIGKIGVDNADYINSIDFNPIVVYP-KSYNVVDAKIILN 231


>gi|149054228|gb|EDM06045.1| ATP citrate lyase, isoform CRA_d [Rattus norvegicus]
          Length = 225

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 63/188 (33%), Gaps = 27/188 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V      K 
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDT----KA 149

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIM 214
            KLL+     + +ED+     ++      +         L+  + D   + LEINPL   
Sbjct: 150 QKLLVGVDEKLNAEDIKRHL-LVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPL--- 205

Query: 215 KNGRLRVL 222
             G +  L
Sbjct: 206 --GNMLCL 211


>gi|126180267|ref|YP_001048232.1| CoA-binding domain-containing protein [Methanoculleus marisnigri
           JR1]
 gi|125863061|gb|ABN58250.1| CoA-binding domain protein [Methanoculleus marisnigri JR1]
          Length = 707

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 77/234 (32%), Gaps = 22/234 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E +   LL    +PV    + +S   A +A   +  P+   V+  QI           
Sbjct: 31  LTESEGYRLLESCGIPVPPNHLATSAEDARAAAGRIGYPVVMKVISPQIV---------- 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 K  V    +         E  G+ +         + V  + VE       E+ +
Sbjct: 81  -----HKSDVGGVITGIESPDGAEEAFGTIMQNAAARAPEATVAGIIVEKQMPAGLEVLI 135

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLEL 179
               D + G V       GG  +E +     + +     +    +   E    +      
Sbjct: 136 GGKTDPSFGKVITFG--LGGKLVELLEDVSIRVLPVTDSEIRAMIREIEGYRLIRGYRGE 193

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             +       +   + +AF +   +   ++NP+I+ + G + V+D++I   D A
Sbjct: 194 SPKDEEALVRVIAAMAQAFIEDPRIREFDLNPVIVYEKG-VSVVDARIIVGDTA 246


>gi|307353320|ref|YP_003894371.1| CoA-binding domain-containing protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156553|gb|ADN35933.1| CoA-binding domain protein [Methanoplanus petrolearius DSM 11571]
          Length = 690

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 22/228 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
              LLR + VP  K  ++ S   A  A   +  P+   +V  QI            +   
Sbjct: 11  GYQLLRDFGVPAPKFKIVKSAEEAAKAGAEIGYPVVMKIVSPQI------------VHKS 58

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GGV V  + K      R+     + + +     +++  + VE+ A    EL L    D
Sbjct: 59  DAGGVIVGVTGKDA---ARDAYNKIVESAKAYNPDAQIEGIIVEEMAKPGLELILGGKTD 115

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
              G V       GG  +E +     + +     D    VT  +   L      ++ +  
Sbjct: 116 PAFGKVITFG--MGGTLVELMKDVTLRILPVDEDDIRTMVTEINAYPLISGYRGMKPKDE 173

Query: 185 IDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDN 231
               ++  ++ K F + + +   +INPL + + G    +D++I  DD+
Sbjct: 174 EALVEIIKSVAKFFEESENVKEFDINPLRLYEEG-ACAVDARIIIDDD 220



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 10/103 (9%)

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR----CDVLVKGILSAVKEV 349
           AN LD+ G A + +    F ++   S +  I   I  G        +   + I++  ++ 
Sbjct: 578 ANPLDLLGDASEKRFTQVFDVLARHSDLWDIAFVI--GFPNLVLDSEHFAQAIVNFSEKT 635

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
              + +   L G  ++ G + + ESG+      DL+ A  K+V
Sbjct: 636 DNPV-IGTLLGGECMEAGIKHLKESGIP--NFDDLEQA-YKVV 674


>gi|302039142|ref|YP_003799464.1| putative acyl-CoA synthetase [Candidatus Nitrospira defluvii]
 gi|300607206|emb|CBK43539.1| putative Acyl-CoA synthetase (NDP forming) [Candidatus Nitrospira
           defluvii]
          Length = 911

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 86/233 (36%), Gaps = 30/233 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +ALL   ++P+  G V +S   A    + +  P+ VVK   H                 G
Sbjct: 700 RALLNAMSIPLPPGGVATSAEEAALLAEQIGFPV-VVKLASHTLV---------HKTEIG 749

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  + K+ +    E + + L   Q+      +  V V+       E+   ++ D + 
Sbjct: 750 GVHLNLNTKAEVRHAFEQIAARLAQDQSLEA---MEGVLVQPMVAGGVEVMAGMVQDPSF 806

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQG 181
           G    +    GG+ +E +         +  I PL  + + D+         L        
Sbjct: 807 G--PLVGFGLGGIHVEILGD------VRFRITPLTELDAADLIRSIKGYRLLQGYRGHPP 858

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                  +L   L +   +  ++  L++NP+  M  G+  R++D++I     A
Sbjct: 859 GDVDAIQELLLRLSRLVEEVPEIVELDLNPIFAMPPGQGCRIVDARIRVAGTA 911



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 29/152 (19%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           AL++   I  LR  + ED   + A   +      +  +G + N  G A+   D  +  G 
Sbjct: 470 ALFQQTGI--LRAETLEDMFALAAGLSDQPLPKGN-RVGIITNAGGPAILCADACEACGL 526

Query: 292 A-----------------PANFL----DVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
                             PA  L    D+   AD ++ A A   +     +  +++    
Sbjct: 527 DVPELSQATVTHLASFLPPAAALRNPVDLIASADPEQYAQAIATLLKSDDIDALIVLYIA 586

Query: 331 GIMR-----CDVLVKGILSAVKEVKINIPLVM 357
                     D + KGIL A     +  P+ +
Sbjct: 587 VTATDVAPIADGIKKGILEARATASVKKPIYI 618


>gi|254171916|ref|ZP_04878592.1| AcdB acetate--coA ligase (ADP-forming) , beta chain [Thermococcus
           sp. AM4]
 gi|214033812|gb|EEB74638.1| AcdB acetate--coA ligase (ADP-forming) , beta chain [Thermococcus
           sp. AM4]
          Length = 253

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 41/239 (17%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y +PV    +  ++  A    + +  P+   ++  QI             
Sbjct: 22  EYEAKQVLKAYGLPVPNEKLAKTLDEALKYAEEIGYPVALKLMSPQIL-----------H 70

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+K  +    S + +     EI  +     +     + +  V V       RE+ + +
Sbjct: 71  KSDAKVVMLNIKSPEELKQKWEEIHEN----ARRYRPDAEILGVLVAPMLRPGREIIIGV 126

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS---------- 172
             D   G         GG+ +E +     + I          +T  D             
Sbjct: 127 TEDPQFGHAIMFG--LGGIFVEVLKDVTFRIIP---------ITERDARKMIREIKSYPI 175

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
           L      +        DL   + +   +    + E+  NP+ + + G+   ++D++I  
Sbjct: 176 LAGARGEEPADIDAIVDLLLKVSQLVDELRDYIKEMDLNPVFVYEKGKGAVIVDARIIL 234


>gi|332527130|ref|ZP_08403209.1| GCN5-like N-acetyltransferase [Rubrivivax benzoatilyticus JA2]
 gi|332111560|gb|EGJ11542.1| GCN5-like N-acetyltransferase [Rubrivivax benzoatilyticus JA2]
          Length = 874

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 93/245 (37%), Gaps = 31/245 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +++PV + ++  + + A      L  P+  +K                
Sbjct: 460 LTEMESKALLAAFHIPVTRTMLARTPNEAMLIASQLGYPV-ALKID--------SPDISH 510

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-----DILRE 117
            +D KG      S   V     ++     + +       R+N + V+  A        RE
Sbjct: 511 KSDVKGVALDVHSAAQVRDRFNDM--MEAVRRAMPSA--RINGITVQPMAGRNSRGKTRE 566

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +Y+ L  D   G         GG  IE +A    + +    ++  +     + A + + L
Sbjct: 567 VYVGLTTDDPFG-PVITF-GAGGTMIELIAD---RAMELPPLNQFLAHRLIERARVAESL 621

Query: 178 E-----LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
                 L          +   + +  C+   +  ++INP+I+ +NG +  +D++I  D +
Sbjct: 622 GEWRGALPAD-IQALEQVLLRVSEMVCELPQLREMDINPIIVDENGAV-AVDARIVIDHS 679

Query: 232 ALYRH 236
           A   H
Sbjct: 680 AASPH 684


>gi|289193036|ref|YP_003458977.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanocaldococcus sp. FS406-22]
 gi|288939486|gb|ADC70241.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanocaldococcus sp. FS406-22]
          Length = 699

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 40/237 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY-VVKSQIHAGGRGKGRFKELP 63
           EY+AK LL  Y +PV KG +  +   A    K L   +  +V  QI            + 
Sbjct: 486 EYKAKKLLSIYGLPVPKGYLAKNEDEAVEYCKKLGKCVMKIVSPQI------------IH 533

Query: 64  ADSKGGVRVESSLKSVISDIREIL-GSTLITKQTGPTGSRVNCVYVEDGADILR-ELYLS 121
               GGV +  + ++     ++++  +    K+       +  V VE+  +  + E+ + 
Sbjct: 534 KTEAGGVII--NPENPKEAFKKLIENAKNYAKRMDIDDLIIEGVLVEEFIEKDKMEIIVG 591

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
              D   G V  +    GG+ +E +            I P   +T +    +   L    
Sbjct: 592 AKRDDIFGSVVMVG--LGGVFVEVLKDVS------FGISP---ITRDFAHEMLKELKSYK 640

Query: 178 ---ELQGQARIDGGDLFPNLYK--AFCDKDMSLLEI--NPLIIMKNGRLRVL-DSKI 226
               ++G+ + D   +   L K   F D    + E+  NP+ +  +     + D++I
Sbjct: 641 VLEGVRGRPKRDINFIVDTLIKIGVFMDIHSEIKEMDLNPVFVFNDKEGGCIGDARI 697



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 25/141 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            IG + N  G  +   D    Y    +NF                     LD+ G A  +
Sbjct: 294 EIGIITNAGGFGVLAADSCVDYNMKLSNFEKSTIEKLKEILPPTANISNPLDIIGDATPE 353

Query: 307 KVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVK--INIPLVMR-LEGA 362
           +     +++  D+++KG+L+ +    + +   + K I+      K   N PL+   + G 
Sbjct: 354 RYRRVIEVLAEDNNIKGLLVILTPQEMTKPLEVAKSIVEVKNSHKEFANKPLITSFVGGV 413

Query: 363 NVDIGNRLIAESGLNVITAID 383
           +V      + ++G+      +
Sbjct: 414 SVKGAKSYLRKNGIPAYITPE 434


>gi|322369639|ref|ZP_08044203.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550809|gb|EFW92459.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 700

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 80/229 (34%), Gaps = 17/229 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P  +G +  S   A SA + + G + +                 L    
Sbjct: 487 EAMGLLDAYGIPTPEGTIADSPEDAVSAAQDIEGNVVM----------KIVSPDILHKSD 536

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV+V    + V     ++    +   +     + +  V V++  D+       + ++R
Sbjct: 537 IGGVKVGVGNEDVYDAYEDL----VTRARNYQPDATILGVQVQEMVDLDSGTETIIGMNR 592

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  +    GG+ +E +     +       +    V   + A L             
Sbjct: 593 DPQFGPLLLFGLGGIFVEIIEDTTFRVAPISEREASEMVNDIEAAPLLRGARGRDPADID 652

Query: 186 DGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNAL 233
              +    L +   D    L L++NPL+   +G +R +D +++ D + L
Sbjct: 653 GVVESLQRLSQLVTDFPAILELDVNPLVATPDG-VRAIDIRLTVDTDEL 700


>gi|283782387|ref|YP_003373142.1| CoA-binding domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283440840|gb|ADB19282.1| CoA-binding domain protein [Pirellula staleyi DSM 6068]
          Length = 911

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 72/240 (30%), Gaps = 40/240 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E  +K LL  Y +PV K +  S+   A    + L  P+   V+  QI           
Sbjct: 491 LTENASKDLLETYGIPVTKPIAASTAAQAVEVARQLGYPVVLKVLSPQI----------- 539

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
               D +G      S         +I+ S  ++       G  V    V     +  EL 
Sbjct: 540 SHKTDVQGVKLNLRSDDETAQAFEQIISSARMLRPDADVQGVTVQR-MVTAVNSV--ELI 596

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-- 177
           L    D   G    +    GG+  E       +         L  +       + + L  
Sbjct: 597 LGAKRDPVFG-PVIMV-GMGGIAAEVYQDRTIE---------LPPLNERLARRMLESLRS 645

Query: 178 --------ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                              ++         D  ++  ++INPL++  +     LD+++  
Sbjct: 646 WPLLSGYRGRPVVNIDRLVEVLMRFSYLVADLPEVQEVDINPLLVSAS-DAMALDARVFV 704


>gi|34604717|gb|AAQ79812.1| acetyl-CoA synthetase (ADP-forming) beta subunit [Haloarcula sp.
           D1]
          Length = 247

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 71/244 (29%), Gaps = 19/244 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E + K LL    +      +  +   A  A   +  P+        A         + 
Sbjct: 17  LTEAEGKRLLADAGIETPPFALCGTAEEAVEAAGDIGYPVV-------AKVSAPSVTHKS 69

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYL 120
                 GV V       +      +      +           V VE   D+    E+ +
Sbjct: 70  EWADGAGVAVGLDSAEAVRGAAGRIFEAAADRGVEAE------VLVEAAMDVDAGTEVIV 123

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
             L D + G V       GG+  E       +       +    +     A L +     
Sbjct: 124 GGLRDPSFGPVVLTG--LGGVFTEVFEDTSHRIAPIDAAEARAAIEELQAARLLEGYRGS 181

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
                    ++   +     D  ++ L+INP++   +G +  LD+ +  ++ A     D 
Sbjct: 182 DPADVAALAEVVATVSDLVTDYPIAELDINPVLASADGAV-ALDALVVLENEATTSTADS 240

Query: 240 QELR 243
            EL 
Sbjct: 241 AELE 244


>gi|91780610|ref|YP_555817.1| putative CoA ligase [Burkholderia xenovorans LB400]
 gi|91693270|gb|ABE36467.1| Putative CoA ligase [Burkholderia xenovorans LB400]
          Length = 708

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 25/236 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE +A+ LL ++ +   +   +S    A SA   + G L V                  
Sbjct: 488 LHEVKARELLLRFGIRGPESECVSDASEASSAAARIGGRLAV----------KIVSDSIT 537

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               +G V +  S  +      EI       +   P    +    VE+G     EL++ +
Sbjct: 538 HRTDRGLVHLNVSPATAFEVASEIELRVKQEEPANPRCQILVQKMVEEGV---AELFIGV 594

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQG 181
              R+      +    GG+ +E    D+  +I    +DP+  G    ++     +   +G
Sbjct: 595 T-RRSGHRPTLLV-GMGGILVELFG-DHVSRIC--PVDPVQAGEMLRELRGFPLLDGFRG 649

Query: 182 QARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISFDDN 231
           + + D   +   L     +     + +   EINPLI++  GR    +D+ +  D N
Sbjct: 650 RPKADLQSVIRTLCAMSDFAMAASQWLGEAEINPLIVLPEGRGALAVDALVVVDSN 705


>gi|18978209|ref|NP_579566.1| hypothetical protein PF1837 [Pyrococcus furiosus DSM 3638]
 gi|18894020|gb|AAL81961.1| hypothetical protein PF1837 [Pyrococcus furiosus DSM 3638]
          Length = 236

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 81/230 (35%), Gaps = 23/230 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y +PV +  +  ++  A    + +  P+ +  +  QI             
Sbjct: 22  EYEAKQVLKAYGLPVPEEKLAKTLDEALKYAEEIGYPVAMKLMSPQIL-----------H 70

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+K  +    S + +     EI  +     +     + +  V +       RE+ + +
Sbjct: 71  KSDAKVVMLNIKSPEELKKKWEEIHEN----ARKYRPDAEIFGVLIAPMLKPGREVIIGV 126

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQG 181
             D   G         GG+ +E +     + I     D    +T      +       + 
Sbjct: 127 TEDPQFGHAIMFG--LGGIFVEILKDVTFRIIPITEKDARKMITEIKAYPILAGARGEEP 184

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
                  D+   + K   D    + E+  NP+ + + G    V+D++I  
Sbjct: 185 ADIEAIVDMLLKVSKLVDDLKDYIKEMDLNPVFVYRKGEGAVVVDARIIL 234


>gi|254173698|ref|ZP_04880370.1| AcdB acetate--coA ligase (ADP-forming) , beta chain [Thermococcus
           sp. AM4]
 gi|214032390|gb|EEB73220.1| AcdB acetate--coA ligase (ADP-forming) , beta chain [Thermococcus
           sp. AM4]
          Length = 232

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 88/226 (38%), Gaps = 26/226 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +LR Y VPV    V ++   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILRLYGVPVPDFKVATNEEEAVKFAREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV+V         + RE   + +   +     + +  V +     + +E+ + ++ 
Sbjct: 73  SDAGGVKVNIKNDE---EAREAFRTIMENAKKYKPDADLWGVIIYKMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   G  A +    GG+ +E   +V+        +  ++ +  + +  +  L      + 
Sbjct: 130 DPQFG-PAIMFGL-GGIFVEILKDVSFRVAPITKEEALEMIKEIKAYPI--LAGARGEKP 185

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                  D+   + +   +  ++  L+INP+   ++G +  +D+++
Sbjct: 186 VDIEALADIIVKVGELALELPEIKELDINPIFAYEDGAV-AVDARM 230


>gi|108805336|ref|YP_645273.1| CoA-binding protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766579|gb|ABG05461.1| CoA-binding protein [Rubrobacter xylanophilus DSM 9941]
          Length = 911

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY++K LL  Y +P  +  V  S   A +    +  P+ V+K                
Sbjct: 505 LTEYESKRLLAAYGIPTVETRVARSPDEAAAHAARIGYPV-VLKLH---------SETIT 554

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                GGVR+   + + V    RE+      +   G  G+ V  +   +G     EL + 
Sbjct: 555 HKTDVGGVRLNLQNEEEVRRAYREM----EASVGEGFDGATVQPMVSLEGY----ELIIG 606

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
              D   G V    S  GG  +E            L + PL    +        + E   
Sbjct: 607 SSPDPQFGPVVLFGS--GGQLVEVYRDRA------LALPPLTTTLARRTMERTRIYEALK 658

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLE--------INPLIIMKNGRLRVLDSKISFD 229
             R         L K F      + E        +NPL+     RL  LD+++   
Sbjct: 659 GVRGRAPVDLGALEKLFVRFSHLVAEQPWIREMDVNPLLASPE-RLLALDARVVLH 713


>gi|158333635|ref|YP_001514807.1| Acetyl-CoA synthetase [Acaryochloris marina MBIC11017]
 gi|158303876|gb|ABW25493.1| Acetyl-CoA synthetase, putative [Acaryochloris marina MBIC11017]
          Length = 917

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 72/241 (29%), Gaps = 44/241 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K  L+ Y +P     +  +   A +  +TL  P+ V+K   H            
Sbjct: 505 LSEWESKQFLQSYGIPTVLSHLAQTPEQAVAFAETLGYPV-VLKLHSHT---------IT 554

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYLS 121
                GGV +     + +      +   +         G  V  +   +G     EL L 
Sbjct: 555 HKTDVGGVHLNLPNAAAVQAAFTSIQQNMQPYGKQAFLGVTVQPMLNHEGY----ELILG 610

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED---VASLCDML- 177
              D   G +       GG  +E               D  +G+   +      L +   
Sbjct: 611 SSSDPQFGPIILFG--LGGQLVEVFQ------------DRALGLPPLNSTLARRLMEQTK 656

Query: 178 ---------ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
                      Q         +         +   +  ++INPL++     +  LD++I 
Sbjct: 657 IYQALQGVRGHQSVNLDQLEQILVKFSHLIVEYPQIKEIDINPLLV-SEHHIVALDARII 715

Query: 228 F 228
            
Sbjct: 716 L 716


>gi|294508161|ref|YP_003572219.1| Acyl-CoA synthetase (NDP forming) [Salinibacter ruber M8]
 gi|294344489|emb|CBH25267.1| Acyl-CoA synthetase (NDP forming) [Salinibacter ruber M8]
          Length = 940

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 26/237 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+ +K LL  Y +P     V  +   A +A + +  P+ VVK                  
Sbjct: 540 EHASKELLAAYGIPTVDSPVAETPEEAVAAAQEIGYPV-VVKLH---------STSITHK 589

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  +  + +                G  G  V  +   D +D   EL +   +
Sbjct: 590 SDVGGVHLGLTSDADVEAA---FAQVENNVAEGFDGVTVQPMI--DRSD-GYELIIGSSM 643

Query: 125 DRTSGMVAFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G V    S    ++  ++ A   P     L    +      +   L  +   +   
Sbjct: 644 DEQFGPVLLFGSGGQLVEVYQDRALGLPPLNRTLARRMMEQTQIYEA--LQGVRGREPVD 701

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINP-LIIMKNGRLRVLDSKISF-----DDNAL 233
                 L     +   ++  +  +++NP L    +  L  LD+++       DD+ L
Sbjct: 702 LDALETLLVRFSQLVVEQPRVKEIDVNPLLARPGDDGLLALDARVVLHPYTKDDDEL 758



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 32/183 (17%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLY 289
           NA +R   +  + D+++         +        +G N+  + N  G  +   D +   
Sbjct: 315 NAAFRRSGVLRVDDINDLFYMAEVLSKQ----PRPEGRNLTILTNAGGPGVLATDALIGG 370

Query: 290 GGA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG                        N +D+ G AD ++ A + ++  +D +  G+L+ +
Sbjct: 371 GGELTPISEDATDAFDDILPGAWSHGNPVDILGDADPERYAESLEVAANDENSDGLLVVL 430

Query: 329 F-GGIMRCDVLVKGILSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVITAIDLDD 386
               +       + +    ++   + P++   + G  V  G  ++ ESGL      D   
Sbjct: 431 TPQAMTEPTKTAEHLRPYARDN--DKPILASWMGGDAVASGENILNESGLPTFAYPDT-- 486

Query: 387 AAQ 389
           AA+
Sbjct: 487 AAR 489


>gi|212223473|ref|YP_002306709.1| acetyl-CoA synthetase I (NDP forming), beta subunit [Thermococcus
           onnurineus NA1]
 gi|212008430|gb|ACJ15812.1| acetyl-CoA synthetase I (NDP forming), beta subunit [Thermococcus
           onnurineus NA1]
          Length = 232

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 87/226 (38%), Gaps = 26/226 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +L+ Y VPV    V ++   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILKLYGVPVPDFKVATNEEEAVQFAREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV+V         + R+   + +   +     + +  V V     + +E+ + ++ 
Sbjct: 73  SDAGGVKVNIKNDE---EARQAFRTIMENAKNYKPDADLWGVIVYKMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   G  A +    GG+ +E   +V+        +  +D +  + +  +  L      + 
Sbjct: 130 DPQFG-PAIMFGL-GGIFVEILKDVSFRVAPITKEEALDMIKEIKAYPI--LAGARGEKP 185

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                  D+   + +   +  ++  L+INP+   ++  +  +D+++
Sbjct: 186 VDIDTLADIIVKVGELALELPEIKELDINPIFAYEDSAV-AVDARM 230


>gi|262089241|gb|ACY24463.1| CoA-binding domain-containing protein [uncultured crenarchaeote
           29d5]
          Length = 706

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 107/324 (33%), Gaps = 31/324 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +L +Y + V K  +++S   A    K +  P  V K               L     
Sbjct: 26  SKEILSEYGIKVPKYALVTSSDEAVQKSKEIGFP-LVAKIV---------SPDILHKTDV 75

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV+V  S +  +    + + + L  K        V  V +E       EL + L  D  
Sbjct: 76  GGVKVGLSSEDEVKKAFDDMFNRLKEKFD------VKGVLLEKMVPKGVELIVGLQNDSQ 129

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARID 186
            G  + +    GG+  E       + +     +    + S     +              
Sbjct: 130 FG-PSIMVGL-GGIYTELFKDVSFRVLPVTKNEAAKMLESLRGKDILKGFRGSTPVDLDM 187

Query: 187 GGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
             +   N+     D       ++ NP+++  +    V+D+KI   D +     D   +  
Sbjct: 188 LSEAIVNIGTLGVDMAGKYESIDFNPVVVYPD-SYYVVDAKIILKDKSSD---DAISMAS 243

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
                  ++     +++ I     IG + N    ++A  D    Y G     ++  G  +
Sbjct: 244 PD-SSYMDLFFNAKSVALIGASPEIGKIGNSVMESLAKHD----YKGKV-YPVNAKGYPE 297

Query: 305 QDKVAAAFKIITSDSSVKGILINI 328
              V A   ++  +  V  +++ +
Sbjct: 298 IMGVKAYKNLMDIEDPVDVVIVTV 321


>gi|224369289|ref|YP_002603453.1| putative acetyl-CoA synthetase [Desulfobacterium autotrophicum
           HRM2]
 gi|223692006|gb|ACN15289.1| putative acetyl-CoA synthetase [Desulfobacterium autotrophicum
           HRM2]
          Length = 225

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 28/227 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K +L  + +P  +  ++     A    +T+  P+ +     H   + +     L
Sbjct: 15  LSEHQSKKVLEAFGIPTTRETLVHGCKEAVVTAETMGYPVVLKACAAHLMHKSEKNCVRL 74

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                           V      I+ S  +          ++ + V++     REL + +
Sbjct: 75  NLTG---------PDQVRDAYDSIMDSIDVE---------IDGILVQEAIHGQRELIMGM 116

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE-LQG 181
             D   G    +    GG+  E       +       D               ML   +G
Sbjct: 117 TRDPQFGACIMLG--MGGIATEIFKDSVFRVA---PFDRGEATDMARELKAAAMLGRFRG 171

Query: 182 QARIDGGDL---FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDS 224
           QAR D   +      L     D  ++S ++INPLII   G++  +D+
Sbjct: 172 QARADMDTICNCLMALAAIALDHPEISEIDINPLIIDPQGKVTAVDA 218


>gi|242399078|ref|YP_002994502.1| Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit beta
           [Thermococcus sibiricus MM 739]
 gi|242265471|gb|ACS90153.1| Acetyl-CoA synthetase I (ACSI, ADP-forming), subunit beta
           [Thermococcus sibiricus MM 739]
          Length = 232

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 83/224 (37%), Gaps = 22/224 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +L+ Y VPV +  V ++   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILQLYGVPVPEFKVATNEEEAVQFAREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV+V         + +E   + +   +     + +  V +     + +E+ + ++ 
Sbjct: 73  SDAGGVKVNIKSDE---EAKEAFNTIMKNAKNYKPDADLWGVIIYKMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK-LLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G           ++I +        I K   ++ +  + +  +  L      +   
Sbjct: 130 DPQFGPAIMFGLGGIFVEILKDVSFRVAPISKEEALEMIKEIKAYPI--LAGARGEKPVN 187

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                ++   + +   +  ++  L+INP+   ++  +  +D++I
Sbjct: 188 IEALAEIIMKVGELALELPEVKELDINPVFAYEDTSV-AVDARI 230


>gi|291614007|ref|YP_003524164.1| CoA-binding domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291584119|gb|ADE11777.1| CoA-binding domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 896

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 26/240 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +N+PVA+ +V  S   A    + L  P+ +         +        
Sbjct: 494 LTEMESKALLAAFNIPVARTMVAHSPGEALLIAQQLGFPVAM---------KVNSPDITH 544

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
            +D+ G V   ++   V +  + I+ +     Q     + +N + +E        REL +
Sbjct: 545 KSDAGGVVLNLNNAHEVRAAYQHIIDNV----QHNRPNATMNGISIEPMIVKPNGRELMI 600

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK--IFKLLIDPLIGVTSEDVASLCDMLE 178
            +  D   G         GG  +E +         +   L+  +IG T      LC    
Sbjct: 601 GVTSDPVFG-PVITF-GAGGTSVEIMGDRAVALPPLNAFLVKDMIGRT-HISKMLCAFRN 657

Query: 179 LQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +         D+   + +  C+   +  ++INPLI+ +NG L   D+++  +    YR  
Sbjct: 658 MAPARIEALEDVLLRVSEMVCELPLLKEMDINPLILDENGAL-AADARVVVE----YRQP 712


>gi|57640400|ref|YP_182878.1| acetyl-CoA synthetase I (NDP forming), beta subunit [Thermococcus
           kodakarensis KOD1]
 gi|57158724|dbj|BAD84654.1| acetyl-CoA synthetase I (NDP forming), beta subunit [Thermococcus
           kodakarensis KOD1]
          Length = 232

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 89/225 (39%), Gaps = 24/225 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +LR Y VPV    V ++   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILRLYGVPVPDFKVATNEEEAVKFAREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV+V         + R+   + +   +     + +  V +     + +E+ + ++ 
Sbjct: 73  SDAGGVKVNIKNDE---EARQAFRTIMENARNYKPDADLWGVIIYRMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLELQGQ 182
           D   G  A +    GG+ +E + KD   ++  +  D  + +  E  A   L      +  
Sbjct: 130 DPQFG-PAIMFGL-GGIFVE-ILKDVSFRVAPISKDEALEMIKEIKAYPILAGARGEKPV 186

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                 D+   + +   +  ++  L+INP+   ++G +  +D+++
Sbjct: 187 DIEALADIIVKVGELALELPEIRELDINPIFAYEDGAV-AVDARM 230


>gi|83814189|ref|YP_446229.1| acetyltransferase [Salinibacter ruber DSM 13855]
 gi|83755583|gb|ABC43696.1| acetyltransferase, GNAT family [Salinibacter ruber DSM 13855]
          Length = 916

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 26/237 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+ +K LL  Y +P     V  +   A +A + +  P+ VVK                  
Sbjct: 516 EHASKELLAAYGIPTVDSPVAETPEEAVAAAQEIGYPV-VVKLH---------STSITHK 565

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  +  + +                G  G  V  +   D +D   EL +   +
Sbjct: 566 SDVGGVHLGLTSDADVEAA---FAQVENNVAEGFDGVTVQPMI--DRSD-GYELIIGSSM 619

Query: 125 DRTSGMVAFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G V    S    ++  ++ A   P     L    +      +   L  +   +   
Sbjct: 620 DEQFGPVLLFGSGGQLVEVYQDRALGLPPLNRTLARRMMEQTQIYEA--LQGVRGREPVD 677

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINP-LIIMKNGRLRVLDSKISF-----DDNAL 233
                 L     +   ++  +  +++NP L    +  L  LD+++       DD+ L
Sbjct: 678 LDALETLLVRFSQLVVEQPRVKEIDVNPLLARPGDDGLLALDARVVLHPYTKDDDEL 734



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 32/183 (17%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLY 289
           NA +R   +  + D+++         +        +G N+  + N  G  +   D +   
Sbjct: 291 NAAFRRSGVLRVDDINDLFYMAEVLSKQ----PRPEGRNLTILTNAGGPGVLATDALIGG 346

Query: 290 GGA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG                        N +D+ G AD ++ A + ++  +D +  G+L+ +
Sbjct: 347 GGELTPISEDATDAFDDILPGAWSHGNPVDILGDADPERYAESLEVAANDENSDGLLVVL 406

Query: 329 F-GGIMRCDVLVKGILSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVITAIDLDD 386
               +       + +    ++   + P++   + G  V  G  ++ ESGL      D   
Sbjct: 407 TPQAMTEPTKTAEHLRPYARDN--DKPILASWMGGDAVASGENILNESGLPTFAYPDT-- 462

Query: 387 AAQ 389
           AA+
Sbjct: 463 AAR 465


>gi|282901587|ref|ZP_06309506.1| GCN5-related N-acetyltransferase [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193513|gb|EFA68491.1| GCN5-related N-acetyltransferase [Cylindrospermopsis raciborskii
           CS-505]
          Length = 922

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK 46
           + E+++K +L  Y +PV +G +  S   A    + +  P+ V+K
Sbjct: 511 LTEFESKEILAAYGIPVVRGSIAQSPEEAVEWAEKIGYPV-VLK 553



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 29/143 (20%)

Query: 271 CMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKVA 309
            + N  G  +   D +   GG  A                     N +D+ G AD  +  
Sbjct: 323 ILTNAGGPGVLATDSLIESGGELAVIAPQTMENLNHILPPQWSHNNPIDILGDADPQRYT 382

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK---EVKINIPLVMRLEGANVDI 366
            A +I + D++  G+L+ +     +       I   +K   +++    L   + G ++  
Sbjct: 383 KALEIASKDTNSDGLLVIL---TPQAMTDPTKIAEELKPYSQMQDKPILASWMGGEDIAE 439

Query: 367 GNRLIAESGLNVITAIDLDDAAQ 389
           G +++   G+   +  D   AA+
Sbjct: 440 GQKILNLEGIPTYSYPDT--AAR 460


>gi|154150457|ref|YP_001404075.1| CoA-binding domain-containing protein [Candidatus Methanoregula
           boonei 6A8]
 gi|153999009|gb|ABS55432.1| CoA-binding domain protein [Methanoregula boonei 6A8]
          Length = 687

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 87/233 (37%), Gaps = 24/233 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E +   +LRKY++PV    ++ +   A  A + +  P+   ++  QI    +      
Sbjct: 6   LSEAEGYDILRKYDIPVPAYQIVKNGEDAAIAAEKMGCPVVMKIISPQIV--HKSDAGGV 63

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +   S+       +               +   +     + ++ V VE  A+   EL +
Sbjct: 64  MVGIGSRKAALGAFT-------------RIIDNAKAYNADAEIDGVMVEQQAEPGLELII 110

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLE 178
               D   G V       GG  +E + KD   +I  +  D +  +  E  A   +     
Sbjct: 111 GGRTDPAFGKVITFG--MGGTMVE-LMKDVTLRILPVTEDEIRQMVKEINAYPLIAGYRG 167

Query: 179 LQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
            + +       +  ++ + F + + +   +INPL + ++G    +D+++   D
Sbjct: 168 SKPRDEETLVKIIGDVSRFFLENEHIVEFDINPLRLYESG-ACAVDARVIVTD 219


>gi|327401888|ref|YP_004342727.1| CoA-binding domain-containing protein [Archaeoglobus veneficus
           SNP6]
 gi|327317396|gb|AEA48012.1| CoA-binding domain protein [Archaeoglobus veneficus SNP6]
          Length = 659

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 75/220 (34%), Gaps = 20/220 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+   +P  +  V+ +   A     ++  P+ +               + +     G 
Sbjct: 452 EILKACGIPAPRYGVVRTADEAVKIADSIGYPVAM----------KVLSPEIVHKTDVGC 501

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V+++   + V     EI     +T+       R++ V ++      +E+ + +  D  S 
Sbjct: 502 VKLDVEREEVRRAFIEI-----VTRAEMLGDVRIDGVLIQQMIKGGKEVIVGMKRD-PSF 555

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGG 188
               +    GG+ +E       +       D    +       L   +   +        
Sbjct: 556 GPMLMFGL-GGIYVEVFRDVTFRIAPVTENDAYEMIREVKSYRLLRGVRGEKPCDIDSIA 614

Query: 189 DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
           D+   + +   +   +  +EINPL + ++G    LD KI+
Sbjct: 615 DVILKMSQLSIEIPQIMEMEINPLKVFEDG-CYALDFKIT 653


>gi|167045569|gb|ABZ10219.1| putative CoA-binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG10I20]
          Length = 219

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 25/215 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK++L+KY V V    + +S   A    K L  PL   VV  QI                
Sbjct: 24  AKSILKKYKVSVPGFSLATSADQAVRDAKRLGFPLVMKVVSPQIL------------HKT 71

Query: 66  SKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             GGV+V   ++  V     ++ G       +   G  V  + +E       EL + +  
Sbjct: 72  DVGGVKVGVDNIADVKKTFNDMYGRL-----SKKKGVNVKGILLEKMVPKGVELIVGIQT 126

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G    +    GG     +     + +     D    +     + +       +   
Sbjct: 127 DPQLG-PVIMVGL-GGTLTNLLNDVSWRMLPITTSDAKSMLNDLKGSKILKGFRGSKPID 184

Query: 184 RIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKN 216
                     + K   D    ++ ++ NP+++  N
Sbjct: 185 LNMLAKALVQIGKIGVDNADYINSIDFNPIVVYPN 219


>gi|257053345|ref|YP_003131178.1| CoA-binding domain protein [Halorhabdus utahensis DSM 12940]
 gi|256692108|gb|ACV12445.1| CoA-binding domain protein [Halorhabdus utahensis DSM 12940]
          Length = 698

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 21/227 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P  +G ++S  +AA  A K +PG + +                 L    
Sbjct: 485 EAMELLEAYGIPTPQGAIVSDKNAAVEAAKDIPGNVVM----------KIVSPDILHKSD 534

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            GGV V      V S   +++       +     + +  V V++ AD+    E  + +  
Sbjct: 535 IGGVEVSVPDDEVASTYDDLIAR----ARNYQPDATILGVQVQEMADLDAGTETIVGINR 590

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G +       GG+ +E +     +       +    +   D A L       +   
Sbjct: 591 DPQFGPLVMFG--LGGIFVEVLEDATFRVAPVSEPEAEEMIDEIDSAPLLRGARGREPVD 648

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFD 229
                +    + K   D    L L+INPL+   +G +  +D + + D
Sbjct: 649 EAGVVETIQRISKLVTDFPAILELDINPLVATPDG-VVAVDIRATVD 694



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 25/132 (18%)

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDK 307
           I  + N  G  + + D I   G   A                     N +DV G A  ++
Sbjct: 299 IAIVTNAGGPGVMSTDAIGDSGLEMATLTDETLEALEADMPDGANIYNPVDVLGDAPSER 358

Query: 308 VAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRL-EGANVD 365
              A  ++  D +V  +++      ++  + L + +    +E    +P+   L  G +  
Sbjct: 359 YEQALDVVLQDPNVGSVVVVACPTAVLSFEKLAETVTDKFEEYG--VPMAASLMGGDSAQ 416

Query: 366 IGNRLIAESGLN 377
             N ++ E+G+ 
Sbjct: 417 QANEILGEAGIP 428


>gi|152990670|ref|YP_001356392.1| hypothetical protein NIS_0924 [Nitratiruptor sp. SB155-2]
 gi|151422531|dbj|BAF70035.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 636

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVH----AAESAIKTLPGPLYVVKSQIHAGGRGK 56
           M   E++   LLR+Y + V K  V    H        A+  +     V KS +       
Sbjct: 1   MK--EFEIYELLRRYGINVPKYAVYEIDHMLSFDRFPAVLKIASDKVVHKSDV------- 51

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                      G      S+  +    REI+ S  I           +   VE+      
Sbjct: 52  ----------GGVRTGIHSMDELQEAKREIINSLQIHGIFLDLN---DRFIVEEEL-HGE 97

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           E Y+  + D     V      +GG+ +E +       ++    + L    +  V+ +   
Sbjct: 98  EFYIGGIYDPIFEEVLLFG--KGGVMLEILKDICYIDVYANKDEILRSFKTTKVSKMFPH 155

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
              +        D      + F ++++S  +INPLI   +G    +D++I     + + H
Sbjct: 156 FRGKEYKIEYLLDTIQKFQQLFLEENISEFDINPLIYTDDG-FVAVDARIK--RGSKFHH 212

Query: 237 LDIQELRDVSEEDS 250
              + + D+ E ++
Sbjct: 213 KRRKRVYDLFENEN 226


>gi|91778593|ref|YP_553801.1| putative acetyl-CoA synthetase [Burkholderia xenovorans LB400]
 gi|91691253|gb|ABE34451.1| Putative acetyl-CoA synthetase [Burkholderia xenovorans LB400]
          Length = 892

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 91/238 (38%), Gaps = 32/238 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +++P+ + ++  + + A      +  P+  +K                
Sbjct: 481 LTEMESKALLAAFHIPITQTILAHNANEAMLIASQIGYPV-ALKID--------SPDIAH 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED--GADILRELYL 120
            +D +G V    +  SV     ++    + T +     +R+N V ++   G    RELY+
Sbjct: 532 KSDVQGVVLNVLNATSVRDIYNDM----IATVRRLRPDARINGVTIQKMSGKKHGRELYI 587

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASL 173
            ++ D+  G         GG  IE +     +      + PL    S           +L
Sbjct: 588 GVVTDQPFG-PVITF-GAGGTMIELINDRAVE------LPPLNQFLSQRLIQRVRSAETL 639

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +              +   + +  C    +  ++INPLI+ + G L  +D+++  D+
Sbjct: 640 GEWRGAPAVRSEAIEHVLLRVSEMVCALPQLREMDINPLIVDETGAL-AVDARVVIDN 696


>gi|56478632|ref|YP_160221.1| organic acid-CoA ligase (ADP forming), feruloyl-CoA synthetase
           [Aromatoleum aromaticum EbN1]
 gi|56314675|emb|CAI09320.1| Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA
           synthetase [Aromatoleum aromaticum EbN1]
          Length = 712

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKE 61
           I EY+ KA L +  +P   G +   V  A      L  P+ V+K+Q  A   +       
Sbjct: 494 IAEYRGKAWLAQAGLPTPPGALARDVDEAVRIATGLGWPV-VLKAQASALPHKSDVGGVI 552

Query: 62  LPADSKGGVRVESSL--KSVISDIREILGSTLITKQTGPTGS 101
           +    + G+R   +     V     +++   ++ ++ G  G 
Sbjct: 553 VNIGDEAGLRAAWTRMQDDVARARPDLVLDGILVEKMGARGL 594


>gi|158521259|ref|YP_001529129.1| CoA-binding domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158510085|gb|ABW67052.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3]
          Length = 753

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 75/224 (33%), Gaps = 22/224 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  +KA+L++Y +PV +     +  AA +A + +  P+ V         + +     L
Sbjct: 45  LSEKDSKAVLKQYGIPVVEETAALNTDAAVAAAEAMGFPVVVKGLGAKLLHKTEAGLVHL 104

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              S   VR                      K     G  +    V+   +  RE    L
Sbjct: 105 KLGSADAVRNACD------------------KIQKGAGDLLEGFLVQPHVEGKREFVAGL 146

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G V       GG+  E ++    +       D    +      SL D     + 
Sbjct: 147 FYDPVFGPVVMFG--LGGIFTEALSDVTFRVAPLEAADAREMLDEIRSRSLLDDFRGEKA 204

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDS 224
             R     +   L        D++ ++INPLI+   GR+  +D+
Sbjct: 205 ADRDQLVSVLMGLSDLSQKAPDVAEVDINPLIVDAEGRVCAVDA 248


>gi|218778877|ref|YP_002430195.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760261|gb|ACL02727.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Desulfatibacillum alkenivorans AK-01]
          Length = 726

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 81/224 (36%), Gaps = 18/224 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  +L+ Y  PV +  V +S    +  +  L  P+ V+K           R      D+
Sbjct: 497 EANEILKIYGFPVLQNRVATSPEEVKPIMDELGTPV-VMKI--------ISRDIVHKFDA 547

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G +    SL+   +   +IL    +  +     + ++ V VE  A+   E+ +    + 
Sbjct: 548 GGVMLNIESLEEAQAAYDQIL----LNAKAFKEDAVIDGVLVEQMAEKGVEIIIG-SHND 602

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
            S     +    GG  +E +     +         +  + S   +++   L         
Sbjct: 603 PSFGPMCMFGL-GGTFVEAIGDVSFRLAPMWESSAVEMIGSTKASTILGGLRGKPPSDID 661

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              D    L +   D  ++  ++INPLI+   G     DS+I+ 
Sbjct: 662 AIKDCLLRLSQLVTDHPEIVEMDINPLIVYPKGCKVA-DSRITL 704


>gi|312879525|ref|ZP_07739325.1| CoA-binding domain protein [Aminomonas paucivorans DSM 12260]
 gi|310782816|gb|EFQ23214.1| CoA-binding domain protein [Aminomonas paucivorans DSM 12260]
          Length = 698

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 19/145 (13%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
           ++ E+ AK  L ++ +PV +  +++S   A  A + +  P+   V+  QI          
Sbjct: 483 SLTEHDAKRFLARHGIPVTRERLVTSREEALEAARQIGYPVALKVMSPQIP--------- 533

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                   G V +       +++     G  L +         +  V V++      E  
Sbjct: 534 ---HKTEAGAVALGLGGDEALTNA---YGRILESALRFAPEGVIQGVLVQEMVREGFECL 587

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIE 144
           + +  D   G    +A   GG+ +E
Sbjct: 588 VGVKRDPLFG--PLVAVGLGGIYVE 610


>gi|118575233|ref|YP_874976.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A]
 gi|118193754|gb|ABK76672.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A]
          Length = 701

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 88/232 (37%), Gaps = 22/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
           ++ E + +A+LR Y +P+ +    S    A  A K +  P+   ++  QI          
Sbjct: 483 SLLEEEGQAVLRAYGLPMPESAAASDPDKAVEAAKKIGYPVVMKIISPQI---------- 532

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
               +D+ G     S+ +   +   EI+ +     Q       +  V + +     RE+ 
Sbjct: 533 -THKSDAGGVKVGISNEQEARAAYSEIIENAKKYDQNAE----IKGVLIVEMVKGGREMI 587

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +             +    GG+ +E +     +       +    ++   +  + D +  
Sbjct: 588 IG-SKQEPGMGPVIML-GMGGIYVEVLKDVTFRLAPITDKEAEEMISGIKMHRILDGVRG 645

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +   +    +    L +   D  ++  L++NP+++++NGR  RVLD +I  
Sbjct: 646 EKPSDKTALAECMLRLSRLASDFAEIRELDMNPVLVLENGRGCRVLDVRIGL 697


>gi|284164917|ref|YP_003403196.1| CoA-binding protein [Haloterrigena turkmenica DSM 5511]
 gi|284014572|gb|ADB60523.1| CoA-binding domain protein [Haloterrigena turkmenica DSM 5511]
          Length = 709

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++  LL  Y +P   G ++     A    +++ G + +                      
Sbjct: 485 ESMELLEAYGIPTPDGEIVDDPDRAREVAESIAGDVVM----------KIVSPDISHKSD 534

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV+V      V     +++       +     + +  V V++  D+       + ++R
Sbjct: 535 IGGVKVGVPDDEVYDAYEDLVAR----ARNYQPDATILGVQVQEMLDLETATETIVGMNR 590

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  +    GG+ +E +     +       +    +     A L       +     
Sbjct: 591 DPQFGPLLLFGLGGIFVEILEDTSVRVAPIGESEARDMIDEIQAAPLLRGARGREPADVE 650

Query: 186 DGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNAL 233
              +    L +   D    L L++NPL+   +G ++ +D +++ D + L
Sbjct: 651 GVVETIQRLSQLVTDFPAVLELDVNPLVAGPDG-VQAIDLRLTVDPDEL 698


>gi|296156217|ref|ZP_06839056.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1]
 gi|295893723|gb|EFG73502.1| GCN5-related N-acetyltransferase [Burkholderia sp. Ch1-1]
          Length = 892

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 91/238 (38%), Gaps = 32/238 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +++P+ + ++  + + A      +  P+  +K                
Sbjct: 481 LTEMESKALLAAFHIPITQTILAHNANEAMLIASQIGYPV-ALKID--------SPDIAH 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED--GADILRELYL 120
            +D +G V    +  SV     ++    + T +     +R+N V ++   G    RELY+
Sbjct: 532 KSDVQGVVLNVLNATSVRDIYNDM----IATVRRLRPDARINGVTIQKMSGKKHGRELYI 587

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASL 173
            ++ D+  G         GG  IE +     +      + PL    S           +L
Sbjct: 588 GVVTDQPFG-PVITF-GAGGTMIELINDRAVE------LPPLNQFLSQRLIQRVRSAETL 639

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +              +   + +  C    +  ++INPLI+ + G L  +D+++  D+
Sbjct: 640 GEWRGAPAVRSEAIEHVLLRVSEMVCALPQLREMDINPLIVDEAGAL-AVDARVVIDN 696



 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 39/202 (19%)

Query: 212 IIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
            +  +G +   D       +A  R      +R  ++  S    AK     Y  +   +  
Sbjct: 244 ALTHSGNIIGSDEVF----DAALRRAGAVRVRSFAQLFS---AAKCLASRYRPVGSRLAI 296

Query: 272 MVNGAGLAMATMDIIKLYGG---------------------APANFLDVGGGADQDKVAA 310
           + NG G  +  +D +   G                        AN LD+   A      A
Sbjct: 297 VTNGGGPGVLAVDWLTELGLVLARLSPDTSAALAPQLPRLATIANLLDLSEEAGPQHYRA 356

Query: 311 AFKIITSDSSVKGILINI---FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG-ANVDI 366
           A     +DS V GIL+      G  +    + + ++ A     I  PL+    G   V  
Sbjct: 357 AAAACAADSEVDGILVIYSPKLG--VDPTAVAQELVLAS--ANIGKPLLTCWMGDQKVAE 412

Query: 367 GNRLIAESGLNVITAIDLDDAA 388
              +I  +G+    +    +AA
Sbjct: 413 AREIINGAGIATFRSP---EAA 431


>gi|167042749|gb|ABZ07469.1| putative CoA-binding domain protein [uncultured marine
           crenarchaeote HF4000_ANIW133O4]
          Length = 705

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 26/228 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK++L+KY + V    + +S   A    K +  PL   VV  QI                
Sbjct: 24  AKSILKKYKISVPGFSLATSADQAVRDAKRIGFPLVMKVVSPQIL------------HKT 71

Query: 66  SKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             GGV+V   ++  V     ++ G       +   G  V  + +E       EL + +  
Sbjct: 72  DVGGVKVGIDNVADVKKTFNDMYGRL-----SKKKGVNVKGILLEKMVPKGEELIVGIQN 126

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G    +    GG+  E       + +     D    +     + +       +   
Sbjct: 127 DPQFG-PVIMVGL-GGVLTEIFKDVAFRMLPITTSDAKSMLNELKGSKILKGFRGRKPVD 184

Query: 184 RIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                     + K   D    ++ ++ NP+++       V+D+KI  +
Sbjct: 185 LNMLAKALVQIGKIGVDNADYINSVDFNPIVVYP-KSYNVVDAKIILN 231


>gi|83593139|ref|YP_426891.1| N-acetyltransferase [Rhodospirillum rubrum ATCC 11170]
 gi|83576053|gb|ABC22604.1| N-acetyltransferase [Rhodospirillum rubrum ATCC 11170]
          Length = 913

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 81/233 (34%), Gaps = 32/233 (13%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +AKA+   Y +P  +  +  +   AE   + + GP+  +K           R     +D 
Sbjct: 510 EAKAVFAAYGIPTVETHIAHTAEEAEDVARRMNGPV-ALKI--------LSRDITHKSDV 560

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQ-TGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G V      ++V     +++G    T       G  V  +          EL +    D
Sbjct: 561 GGVVLDLDHPETVRKAAEDMIGRVTATFPGARLEGFTVQRM---ARRPGAHELIVGATTD 617

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV--ASLCDMLELQGQA 183
              G V      QGG  +E +          + + PL    + D+   +    L L+G  
Sbjct: 618 PIFGPVILFG--QGGTAVEIIRDRS------VALPPLNMALAHDMLERTRVFRL-LEGYR 668

Query: 184 RIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                D+         + +   D  ++  LEINPL     G +  +D+++  +
Sbjct: 669 DKPAADIESICVTLIQVAQMMIDIPEIVELEINPLFADSRG-VLAVDARVRLE 720



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 24/144 (16%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGA---------------------PANFLDVGGGADQD 306
            +  + NG G+ +  +D +   GG                       AN L++GG A  +
Sbjct: 317 RLAILTNGGGIGVMAVDELSDRGGTLAKLSPETLARLHTVVPASTVVANPLNIGGSAPGE 376

Query: 307 KVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
           +  AA +++     V  +L+ +          + + ++   +  +        +  A+V 
Sbjct: 377 RYTAALEVLLDSHDVDAVLVMHAPSAFSSPSDIARKVIDVARARRTASIFTCWVGQASVT 436

Query: 366 IGNRLIAESGLNVITAIDLDDAAQ 389
               L AE+ +   +  D  +  Q
Sbjct: 437 EARGLFAEAQIPTFSTPD--EGVQ 458


>gi|91975831|ref|YP_568490.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5]
 gi|91682287|gb|ABE38589.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB5]
          Length = 907

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 118/394 (29%), Gaps = 66/394 (16%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V K    AG RG      + A+   G     S     +      G  LI       G   
Sbjct: 82  VAKIVAEAGERGVAGAIIISAEMGRGK---GSYAEAANRAARKSGIRLI-------GPNC 131

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI--------- 154
             + V         L  S            + S  G +    V     + I         
Sbjct: 132 LGIMV-----PSSNLNASFAAHMPRRGNLALISQSGAIAAGMVDWAAVKNIGFSGIVSIG 186

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA------FCDKDMSLLEI 208
            +L +D    +           + L  +A  D          A         K   +   
Sbjct: 187 DQLDVDIADMLDFYAADIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKSGRMAHG 246

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
                   G L   D+       A +R   +  + D+ E       A+            
Sbjct: 247 AMAAETHTGALAGADAVYG----AAFRRAGMLRVFDLRELFDC---AETLGRVSAPRGKR 299

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDK 307
           +  + NG G+ +  +D +   GG PA                     N +D+ G AD ++
Sbjct: 300 VAILTNGGGIGVLAVDRLAELGGIPATLSKDVCDKLDAVLPPSWSGSNPIDITGDADAER 359

Query: 308 VAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKIN----IPLVMRLEGA 362
            AA+  ++ +D     IL+ N+   +     + K ++  V E ++      P+     GA
Sbjct: 360 YAASLAVLLADPDNDAILVMNVQTAMTSSAEIAKAVIRVVGEERVRRSFFKPVFAVWVGA 419

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +  +     A S  N +T    DDA + I++ V+
Sbjct: 420 DDTVTKAFDAASIPNYLTE---DDAVRSIINLVR 450


>gi|187918807|ref|YP_001887838.1| CoA-binding domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187717245|gb|ACD18468.1| CoA-binding domain protein [Burkholderia phytofirmans PsJN]
          Length = 750

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 21/229 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++ E+ ++ALLR Y + V K  +  +   A +  + +  P  V+K Q            
Sbjct: 504 LDLTEHASQALLRDYGIDVPKSGLAQNRDQACALARAIGFP-LVIKVQ---------SPD 553

Query: 61  ELPADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  G VRV    ++ ++    EI+G+     +  P  +R+  V V++      E+ 
Sbjct: 554 IAHKTEAGAVRVGIRDEATLAAAFDEIVGN---AHRHVPH-ARIEGVLVQEEIRDALEMI 609

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           + +  D  S   A +    GG+  E +     +       D    +      ++ D    
Sbjct: 610 VGIEND-ASFGPAVM-CGLGGIYAEVLKDVSFRLAPVTHADAHAMIRELRSFAMLDGARG 667

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGR-LRVLDS 224
                     +    L     D+  SL  L+INPL ++  G+ +R  D+
Sbjct: 668 KPPGDIEALVETIVALSTMALDQRASLRELDINPLFVLPAGKGVRAGDA 716


>gi|218778166|ref|YP_002429484.1| ATP-grasp domain-containing protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759550|gb|ACL02016.1| ATP-grasp domain-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 223

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 81/224 (36%), Gaps = 23/224 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L +YN+P+ K ++ ++    + A++ +  PL +         + +    ++
Sbjct: 15  LSESESKQILNQYNIPITKEILATNAQELDQAVQEIGFPLVMKGCAADLAHKTESGLVKI 74

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                         +        ++        +   G     V V++     REL + L
Sbjct: 75  D---------IRDAQEAREAFESMMAKM----DSADKG-----VLVQEMVKGKRELVVGL 116

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G    +    GG+  E +     +       D L  ++      + + +  ++ 
Sbjct: 117 TRDPQFG-PCVMFGL-GGIFTEVLEDIAFRVAPITKADALDMMSEIKGKKILEAIRGMEA 174

Query: 182 QARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDS 224
             +    D+   + K   +      ++INPLI+   G+   +D+
Sbjct: 175 ADKDMLADILVAVGKLGEENQAVSEVDINPLILTG-GKPVAVDA 217


>gi|311269131|ref|XP_003132356.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
          mitochondrial-like [Sus scrofa]
          Length = 82

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL 38
          +N+ EYQ+K L+    V V +  V  + + A  A K L
Sbjct: 38 LNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL 75


>gi|161528627|ref|YP_001582453.1| phosphoribosylamine--glycine ligase [Nitrosopumilus maritimus SCM1]
 gi|160339928|gb|ABX13015.1| phosphoribosylamine--glycine ligase [Nitrosopumilus maritimus SCM1]
          Length = 421

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 88/233 (37%), Gaps = 46/233 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +++ ++P A+  +      A+  IK+L   + VVK+   A G+             
Sbjct: 104 AKDFMKRNDIPTARFEIFDDAEKAQDYIKSLDYNV-VVKADGLAAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +S    IS I+ IL    + K  G  G   N + VE+  D +   Y++ L D  
Sbjct: 150 -GVIVCNSSDEAISAIQTIL----VKKTFGDAG---NRIIVEERIDGIEASYIA-LSDGN 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             +   +AS+Q          G +   +    P  I     D    +  + +      ++
Sbjct: 201 VAIP--MASSQDHKRIFDDDKGPNTGGMGAYSPTPIIDE--DLAKKIQEKIIDKTIQSMK 256

Query: 179 LQGQARIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            +G            LY      D +  +LE N  + M +   + +  ++ FD
Sbjct: 257 NEGITFKGF------LYAGIMIKDNEPYVLEYN--VRMGDPECQPITMRMDFD 301


>gi|222478754|ref|YP_002564991.1| CoA-binding domain protein [Halorubrum lacusprofundi ATCC 49239]
 gi|222451656|gb|ACM55921.1| CoA-binding domain protein [Halorubrum lacusprofundi ATCC 49239]
          Length = 704

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 26/232 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P   G ++ S   A      + G + +                 L    
Sbjct: 484 EAMELLDAYGIPTPAGEIVDSPERAAEVAADIGGDVVM----------KIVSPDILHKSD 533

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            GGV V  S   V     ++    +   +     + V  V V++  D+    E  + +  
Sbjct: 534 IGGVAVGVSDADVTDTYEDL----ITRARNYQPDATVLGVQVQEMVDLDDGVETIVGMNR 589

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDMLELQGQ 182
           D   G    +    GG+ +E V +D   ++  +       +T E      L         
Sbjct: 590 DPQFG-PLLMFGL-GGIFVE-VMEDTTFRVAPVSEPEAREMTEEIQSAPLLRGARGRDPV 646

Query: 183 ARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGR----LRVLDSKISFD 229
                 +    L +   D    L L+INPL+ + +         +D +++ D
Sbjct: 647 DVDAVIETIGRLSQLVTDFPAILELDINPLVALPDADGGTNAAAVDVRLTVD 698


>gi|256811312|ref|YP_003128681.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanocaldococcus fervens AG86]
 gi|256794512|gb|ACV25181.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanocaldococcus fervens AG86]
          Length = 699

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 91/237 (38%), Gaps = 40/237 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY-VVKSQIHAGGRGKGRFKELP 63
           EY+AK LL  Y  PV +G +  +   A +  K L   +  +V  QI            + 
Sbjct: 486 EYKAKKLLAIYGFPVPEGYLAKNEDEALNYAKKLGKCVMKIVSPQI------------IH 533

Query: 64  ADSKGGVRVES-SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-ELYLS 121
               GGV +   + K     +  I  +    ++ G     +  V VE+  +  + E+ + 
Sbjct: 534 KTEAGGVAINPENPKEAFKIL--IENAKKYAEKIGIDDLIIEGVLVEEFIERDKMEIIIG 591

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
              D   G V  +    GG+ +E +            I P   +T E    +   L    
Sbjct: 592 AKRDEIFGSVVMVG--LGGVFVEVLKDVS------FGISP---ITREFAHEMLKELKSYK 640

Query: 178 ---ELQGQARIDGGDLFPNLYK--AFCD--KDMSLLEINPLIIMKNGRLRVL-DSKI 226
               ++G+A+ D   +   L K   F D  K++  +++NP+ +  +     + D++I
Sbjct: 641 VLEGVRGRAKRDIEFIVDCLIKIGVFMDIHKEIKEMDLNPVFVFNDKEGGCIGDARI 697


>gi|239943416|ref|ZP_04695353.1| putative acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989869|ref|ZP_04710533.1| putative acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379]
          Length = 742

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 21/226 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S   A  A   +  P+      + A G       EL
Sbjct: 529 LSEHAAKQLLRAYGIRVPREQLVTSAAGAVRAAGPVGYPVV-----MKASGPRLAHKTEL 583

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T         ++ + V    D   E+ + +
Sbjct: 584 GLVKVG----LTSASQVRDAYREL------TDIARYESVDLDGILVCQMIDRGVEMMVGV 633

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G    +    GG+ +E +     +       D    +      +L + +     
Sbjct: 634 THDALFGPTVTVG--LGGVLVEVLHDAAVRVPPFGERDARDMLGELRGRALLEGVRGGAP 691

Query: 182 QARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                  ++   + +   +   D++ L+INPL+++  G+    LD+
Sbjct: 692 VDVDALVEVVLRVQRMALELGDDLAELDINPLVVLGRGQGAVALDA 737


>gi|291446885|ref|ZP_06586275.1| pimeloyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291349832|gb|EFE76736.1| pimeloyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 712

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 21/226 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S   A  A   +  P+      + A G       EL
Sbjct: 499 LSEHAAKQLLRAYGIRVPREQLVTSAAGAVRAAGPVGYPVV-----MKASGPRLAHKTEL 553

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T         ++ + V    D   E+ + +
Sbjct: 554 GLVKVG----LTSASQVRDAYREL------TDIARYESVDLDGILVCQMIDRGVEMMVGV 603

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G    +    GG+ +E +     +       D    +      +L + +     
Sbjct: 604 THDALFGPTVTVG--LGGVLVEVLHDAAVRVPPFGERDARDMLGELRGRALLEGVRGGAP 661

Query: 182 QARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                  ++   + +   +   D++ L+INPL+++  G+    LD+
Sbjct: 662 VDVDALVEVVLRVQRMALELGDDLAELDINPLVVLGRGQGAVALDA 707


>gi|82523921|emb|CAI78643.1| Acyl-CoA synthetase (NDP forming) [uncultured delta
           proteobacterium]
          Length = 249

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 88/228 (38%), Gaps = 24/228 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++EY+AK+ L  + VP+ + V+ SSV AA +    +  P+ V+K+         G     
Sbjct: 42  LNEYEAKSFLAAFGVPICREVLASSVDAAFAEAVKIGFPV-VLKA--------SGEKLAH 92

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             ++ G V    S   + S+ + +L            G     + V++     REL   L
Sbjct: 93  KTEAGGVVLNVKSELEIRSEGQRLL---------EIPG--CEALLVQEMIVGARELVCGL 141

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D  S   + +    GG+  E +     +     + D    ++     ++   L     
Sbjct: 142 TRD-HSFGPSVMFGL-GGILTETLKDTVFRIAPLTMYDAKDMMSGIKANTILQPLRGEAA 199

Query: 182 QARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISF 228
                   +   + +     + ++ ++INPL I ++G+   +D+ I  
Sbjct: 200 VDTDLLAKILITVGEIGLQFETIAEIDINPLKICRDGKPVAVDALIVL 247


>gi|161527714|ref|YP_001581540.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus
           SCM1]
 gi|160339015|gb|ABX12102.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1]
          Length = 698

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 95/232 (40%), Gaps = 22/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E + + +L+ Y +P+ K  +  +   A  A K +  P+ +               + 
Sbjct: 484 NLLEEEGQEVLKAYGLPLPKSTLAKNEAEAVKAAKKIGYPVVM----------KIASPQI 533

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           +     GGV+V  +     +++++   + +   +     + +  V + +     +EL + 
Sbjct: 534 IHKSDAGGVKVNLTND---AEVKDAFKTIVKNAKKYNKKAEIKGVLIVEMVKGGKELIIG 590

Query: 122 LLVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             ++   G V  +    GG+ +E   +V         K   D +  + ++ +  L  +  
Sbjct: 591 SKLEPGFGPVIMLG--MGGIYVEVLKDVTFKLAPVTDKEADDMIASIKTQKL--LQGVRG 646

Query: 179 LQGQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +    +   +    L +   D K++  L++NP+++M+ G+  R+LD +I  
Sbjct: 647 EKPSDIVKLSECIQRLSQLVSDFKEIKELDMNPVLVMEKGKGCRILDVRIGL 698


>gi|209517965|ref|ZP_03266797.1| CoA-binding domain protein [Burkholderia sp. H160]
 gi|209501571|gb|EEA01595.1| CoA-binding domain protein [Burkholderia sp. H160]
          Length = 717

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           EYQ K  L    +PV KG +  S+  A      +  P+ V+K+Q
Sbjct: 499 EYQGKGWLAAAGLPVPKGCLAKSLDEALKIADEIGYPV-VLKAQ 541


>gi|11499106|ref|NP_070340.1| hypothetical protein AF1511 [Archaeoglobus fulgidus DSM 4304]
 gi|2649053|gb|AAB89736.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 881

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 31/230 (13%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LLR + +   +   + +      A K        +K+              +    
Sbjct: 679 EAFELLRCFGISFPEYEYVKTPEEVYEAAKKFG--RVALKAHAP---------NLIHKTE 727

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           KG V+V  + K    +  E+L               V    V        E+++ +  D 
Sbjct: 728 KGAVKVNLTPKEAKKEAEEMLKRI----------GEVEGFLV-QRMSRGVEMFVGVAEDP 776

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           + G    I    GG+ +E +     +       D +  V       L +    +G  + +
Sbjct: 777 SFG--PLITCGAGGILVELMKDVSVRVTPITRQDAVEMVRELKAYRLLE--GYRGGEKAN 832

Query: 187 GGDLFPNLYKA--FCDKDMSLLEI--NPLIIMKNGRLRVLDSKISFDDNA 232
                  + +     ++   ++E+  NP+++  +G   V+D+KI    N+
Sbjct: 833 VEAFIETILRINYLIEEFPEIVEMDCNPVMVSSSG-AEVVDAKIRIRRNS 881


>gi|240103345|ref|YP_002959654.1| Acetyl-CoA synthetase (ADP forming), beta chain (acdB)
           [Thermococcus gammatolerans EJ3]
 gi|239910899|gb|ACS33790.1| Acetyl-CoA synthetase (ADP forming), beta chain (acdB)
           [Thermococcus gammatolerans EJ3]
          Length = 232

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 87/226 (38%), Gaps = 26/226 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +LR Y VPV    V ++   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILRLYGVPVPDFKVATNEEEAVKFAREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV+V         + RE   + +   +     + +  V +     + +E+ + ++ 
Sbjct: 73  SDAGGVKVNIKNDE---EAREAFRTIMENARKYKPDADLWGVIIYKMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   G  A +    GG+ +E   +V+        +  ++ +  + +  +  L      + 
Sbjct: 130 DPQFG-PAIMFGL-GGIFVEILKDVSFRVAPITKEEALEMIKEIKAYPI--LAGARGEKP 185

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                  D+   + +   +  ++  L+INP+   ++  +  +D+++
Sbjct: 186 VDIEALADIIVKVGELALELPEIKELDINPIFAYEDSAV-AVDARM 230


>gi|219850672|ref|YP_002465105.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing
           protein [Chloroflexus aggregans DSM 9485]
 gi|219544931|gb|ACL26669.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Chloroflexus aggregans DSM 9485]
          Length = 696

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 89/233 (38%), Gaps = 28/233 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A+ ++  Y + + K  +  +   A +       P+ +                 L  
Sbjct: 484 EVEARQVMEAYGMRLPKSRLAHTPEEAVAIANEFGYPVVM----------KISSPDILHK 533

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGVRV  S  + +SD  E++       +     +R+  + V++     RE+ + +  
Sbjct: 534 SDIGGVRVGLSDAAAVSDAFELIEYR---ARKYVPSARIWGILVQEMVRKGREVLVGVSR 590

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDML-----E 178
           D   G    IA   GG+ +E V KD   ++  L ++ +     E + S+    L      
Sbjct: 591 DPQFG--PLIAVGMGGIYVE-VLKDVAFRLAPLSVEEVQ----EQIRSIRAYPLLRGVRG 643

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFD 229
                     +    + +   D  ++  ++INPL++   G    VLD++I  +
Sbjct: 644 EPPADIAALEETVLRVSQLVTDFPEIVEMDINPLVVHYEGEGAVVLDARIILN 696


>gi|114055026|gb|ABI50082.1| ATP citrate lyase beta subunit [Thermovibrio ruber]
          Length = 149

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 271 CMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSVK 322
            MV G G ++   D +   G     AN+ +  G   + +     K +        D   +
Sbjct: 1   TMVAGGGASVVYADTVADLGYVKELANYGEYSGNPSRAETREYVKTVLDLMTRHKDPQGR 60

Query: 323 GILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANVDIGNRLIAES 374
             ++ I G I     + K   GI+ A+KE      ++ + + +R  G N ++G   I ++
Sbjct: 61  PKILIIGGAIANFTDVAKTFDGIIDALKEYADKLKEVGVKIYVRRGGPNYEVGLAKIKKA 120

Query: 375 ----GLNVITA 381
               GL +   
Sbjct: 121 AEELGLPIEVY 131


>gi|90417805|ref|ZP_01225717.1| acetyltransferase, GNAT family [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337477|gb|EAS51128.1| acetyltransferase, GNAT family [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 897

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 84/239 (35%), Gaps = 24/239 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK LL  + +P     +   V  A +  + +  P  V+K                
Sbjct: 490 LSEYEAKRLLATFGIPTVTTRMAGDVDGAVACFEAIGAP-AVLKIV--------SAEISH 540

Query: 63  PADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
            +D+ G      S + +      +L +           G  V  + V DGA    EL   
Sbjct: 541 KSDAGGVRLNIGSAQEMRESAEAMLEAVRAYAPHARIDGFTVQPMIVRDGAY---ELIAG 597

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D  +     +   +GG   E +     + I    ++ ++         +  +L    
Sbjct: 598 IAPD-PTFGPVILF-GRGGKAAEVIGD---RAIGLPPLNSVLAREMIRATRISKLLAGYR 652

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           ++   A     D+   L +      D++ L+INPL+    G +  LD++IS       R
Sbjct: 653 DVAPVAFDALADVLVRLSELAVHLPDVAELDINPLLADAEG-VLALDARISLHAAGAVR 710



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 39/194 (20%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IGCMVNGAGLAMATMDIIKLY 289
           +A +R   I  +R++ E      EA     S + + G+ +  + NG G  +  +D ++  
Sbjct: 267 DAAFRRAGILRVREIEELF----EAAATLASGVRISGDRLTILTNGGGAGVLAVDALESD 322

Query: 290 GGA----------------P-----ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG                 P     AN +D+ G A  ++  AA  I+  +     IL+  
Sbjct: 323 GGRLARLSEEGIAALDGVLPPTWSRANPVDIIGDATPERYGAALDILMKERESDAILV-- 380

Query: 329 FGGIMRCDVLVKGI-----LSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVITAI 382
              I     +  G+     ++A+ + +   P++   L G +      L A     V T  
Sbjct: 381 ---INCPTAVADGMEAGRRIAAIAKRRPRFPVLTNWLGGTSAAPVRDLFAAE--KVATFD 435

Query: 383 DLDDAAQKIVHAVK 396
             + A +   H V+
Sbjct: 436 SPEKAIRAFTHLVE 449


>gi|290973168|ref|XP_002669321.1| GCN5-related N-acetyltransferase [Naegleria gruberi]
 gi|284082867|gb|EFC36577.1| GCN5-related N-acetyltransferase [Naegleria gruberi]
          Length = 1100

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 75/244 (30%), Gaps = 34/244 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK---SQIHAGGRGKGRF 59
           ++EY+++ LL  Y + V +  + +S   A  A K +  P+ V+K   S         G  
Sbjct: 646 LNEYESQHLLSLYGIGVPQTRIANSAEEAVEAAKHIGYPV-VLKLHNSDTTISKLDLGGV 704

Query: 60  KELPADSKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                D K   +  +S+K  +     +  G T+ +            +       I  EL
Sbjct: 705 LLNLMDEKQVKQGFNSIKQSVEKSNVKFTGVTVQSD--------CKKIATGKRDSISFEL 756

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCD 175
           YL   VD           T G +      K Y        I PL    +  +     + D
Sbjct: 757 YLGSEVD-EKFGPVISFGTGGSLHQIYKDKSY-------GIPPLTAPLAYQLLRKTKISD 808

Query: 176 ML-----ELQGQARIDGGDLFPNLYKAFCDKD--MSLLEINP---LIIMKNGRLRVLDSK 225
            L                 L     +   D    +   EINP   L          LD +
Sbjct: 809 ALVERFRNKPAIDIEGLKSLLVRFSRMVLDNSDLIKEFEINPLQALATDNEKSFTALDCR 868

Query: 226 ISFD 229
           ++  
Sbjct: 869 LTLH 872



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 42/196 (21%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK--- 287
           NAL+  + I  LR  S E+   +  +      I     I  + N  G A   +D I    
Sbjct: 405 NALFERVGI--LRVNSIEEMFYMS-QLIGKQAITKGNTITVISNSGGAATLAVDAIYQSN 461

Query: 288 -------------------------LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVK 322
                                    L  G  A  +++   A  ++  AA  I+ +D    
Sbjct: 462 ITELGAISNKSAKLLQESGIDVEEALLSGKKAIPVNIRNTATPEQYVAALDIVYNDPKTD 521

Query: 323 GILINIFGGIMRCD--VLVKG----ILSAVKEVKINIPLVMR-LEGANVDIGNRLIAESG 375
            +L+ +     R +     +     I+   KE K++ P++   + G +V+ G  ++  + 
Sbjct: 522 SVLV-MLTPQTRTEPTRTAQFLQRYIVEKTKEGKLSKPIMCCFMGGRDVEAGRSILLSAN 580

Query: 376 LNVITAIDLDDAAQKI 391
           +      ++   A K+
Sbjct: 581 IPAFAFPEI---ATKV 593


>gi|307322696|ref|ZP_07602022.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Sinorhizobium meliloti AK83]
 gi|306891653|gb|EFN22513.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Sinorhizobium meliloti AK83]
          Length = 442

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 27/142 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL    VP+    V ++    ESA+  +  P+ V+K  + +G                
Sbjct: 118 RQLLEHAGVPIPDYRVATNATEVESAVAEIGLPV-VIKPVVGSG--------------SS 162

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV++  ++  V    R +LG T + + +         + VE+ A      Y    VD   
Sbjct: 163 GVQMCRTVDEVAEHTRHLLGGTHMWQSSP-------RILVEEFAQGQ---YF--TVDMMG 210

Query: 129 GMVAFIASTQGGMDIEEVAKDY 150
           G V  I +   G     V ++Y
Sbjct: 211 GRVVGIGAGDFGPPPHFVYREY 232


>gi|313126866|ref|YP_004037136.1| acyl-CoA synthetase (ndp forming) [Halogeometricum borinquense DSM
           11551]
 gi|312293231|gb|ADQ67691.1| acyl-CoA synthetase (NDP forming) [Halogeometricum borinquense DSM
           11551]
          Length = 697

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 23/230 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +    G ++ +   A    + + G + +                 L    
Sbjct: 484 EAMDLLDAYGIQTPDGDIVDAPAEALEVAEDIEGDVVM----------KIVSPDILHKSD 533

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            GGV+V    + V     ++    +   +     + +  V V++  D+    E  + +  
Sbjct: 534 IGGVKVGVPNEEVYDAYEDL----VTRARNYQPDANIIGVQVQEMVDLDSGVETIVGMNR 589

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDMLELQGQ 182
           D   G    +    GG+ +E V +D   ++  +       +T E      L         
Sbjct: 590 DPQFG-PLLMFGL-GGIFVE-VLEDTTFRVAPVSESEAHEMTEEIDSAPLLRGARGRDPV 646

Query: 183 ARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDN 231
                 +    L +   D    L L+INPL+   +G ++ +D +++ D +
Sbjct: 647 DVAGVTETIQRLSQLVTDFPAILELDINPLVATPDG-VQAVDVRLTVDPD 695


>gi|309790917|ref|ZP_07685459.1| acetyl coenzyme A synthetase subunit alpha [Oscillochloris
           trichoides DG6]
 gi|308227031|gb|EFO80717.1| acetyl coenzyme A synthetase subunit alpha [Oscillochloris
           trichoides DG6]
          Length = 696

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 87/234 (37%), Gaps = 32/234 (13%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A+ ++  Y + + K  + SS   A      +  P+ +                 L  
Sbjct: 484 EIEAREVIDAYGMRLPKSRLASSPDEAAQIASEIGFPVVM----------KISSPDILHK 533

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGVRV  +  +   D  E++       +    G+R+  V V++     RE+ + +  
Sbjct: 534 TDIGGVRVGITDAASARDSYELIEYR---ARKYSPGARIWGVLVQEMVRKGREILVGVTR 590

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQK--IFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           D   G    I    GG+ +E +     +   I +  +D       E + S+     L+G 
Sbjct: 591 DPQFG--PLIGVGMGGIYVEVLKDIAFRLAPISEQEVD-------EQLRSIRTFPLLRGV 641

Query: 183 ARIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                 D+         + +   D  ++  ++INPL++   G    VLD++I  
Sbjct: 642 RGEPSADIAAIEETVLRVSQLVMDFPEIVEMDINPLVVHNQGEGAIVLDARIIL 695


>gi|11498537|ref|NP_069765.1| hypothetical protein AF0932 [Archaeoglobus fulgidus DSM 4304]
 gi|2649664|gb|AAB90306.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 666

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 23/226 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++KALL KY +  AK +   +   A  A K +  P+      +   GR        
Sbjct: 4   LLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVV-----MKVAGREIIH---- 54

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D  G +    S   V    + ++        + P    VN   ++   +   E+ + +
Sbjct: 55  KSDVGGVILNVKSEDEVREVFQRLM--------SIPKAEGVN---IQPQLEKGIEVIIGV 103

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             +   G VA      GG+ +E +     + +     D    V       L +       
Sbjct: 104 AENEQFGSVAMFG--LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRGVKG 161

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                 DL   L +    + +  +++NP+ + + G + V D++I  
Sbjct: 162 DVGAVVDLLLKLNEVVEKEGIVEMDLNPVFVYERGAVVV-DARIVV 206


>gi|126466133|ref|YP_001041242.1| branched-chain acyl-CoA synthetase (ADP-forming) beta subunit /
           acetyl-CoA synthetase (ADP-forming) beta subunit
           [Staphylothermus marinus F1]
 gi|126014956|gb|ABN70334.1| branched-chain acyl-CoA synthetase (ADP-forming) beta subunit /
           acetyl-CoA synthetase (ADP-forming) beta subunit
           [Staphylothermus marinus F1]
          Length = 231

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 84/229 (36%), Gaps = 18/229 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A  +++ YN+P  +  +  S+  A    + +  P  V+K               
Sbjct: 17  KLLEHEAFEIIKAYNIPAPETAIARSLEEAIKIAEKIGYP-LVLKIV--------SPDIS 67

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +D  G +    S + +I    +I  +          G+R+  V ++  A    E+ + 
Sbjct: 68  HKSDVGGVILNIKSKEELIKAFNKIYENV----SKNAPGARIVGVLIQKMAPKGLEVIIG 123

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
            L D   G V       GG+ +E +     +       D    ++    + L +      
Sbjct: 124 GLRDNIFGPVVMFG--LGGIFVEVLKDVSFRIAPLTEEDAFEMMSEIKASKLLEGYRGQP 181

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              +     +  ++ K   +  ++  +++NP++   +  + V D++I  
Sbjct: 182 PVDKKSLAKIILSVSKLLEENPEIESIDLNPVMAYPDNAVVV-DARIIL 229


>gi|167945657|ref|ZP_02532731.1| ATP-grasp domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
 gi|110589108|gb|ABG77063.1| putative citryl-CoA synthetase large subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 170

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 102 RVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
           +   V  E       E+Y S+             +  GGMDIEE+    P+KI  +  DP
Sbjct: 91  KAEGVTFEGAVPAKYEIYFSITDSTEFRAPTITITHHGGMDIEELP---PEKIASIPFDP 147

Query: 162 LIGVTSEDVASLCDMLELQGQAR 184
           L G+    V++    L    +  
Sbjct: 148 LTGLKGFVVSNALKRLGAPSELI 170


>gi|254488401|ref|ZP_05101606.1| hypothetical protein RGAI101_3063 [Roseobacter sp. GAI101]
 gi|214045270|gb|EEB85908.1| hypothetical protein RGAI101_3063 [Roseobacter sp. GAI101]
          Length = 671

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 75/229 (32%), Gaps = 40/229 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA L+ + + V +G V  +   A     +  G + V+K Q  A           
Sbjct: 471 LTEAEAKAALQGFGLRVPQGQVAQTPKEAARIALSFGGAV-VLKGQGLA----------- 518

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                G V V    + V +    +        Q G          VE+   D + EL + 
Sbjct: 519 HKSEAGAVAVGLQPQDVEAAAARM--------QAG-------SFLVEEMITDPVAELLIG 563

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
           +  D   G +  + +  GG+  E         +          V       +  +L   +
Sbjct: 564 VTRDPAHGFLLTLGA--GGVLTELWQDTTSLLLPVTETQIGDAV---QALRIAPLLNGYR 618

Query: 181 GQARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           G+   D   +   +     Y       +S +EINPLI         +D+
Sbjct: 619 GKPGADIPAVIAAVLSVQAYVIAHLDTISEVEINPLICTTT-SAIAVDA 666


>gi|88602746|ref|YP_502924.1| CoA-binding [Methanospirillum hungatei JF-1]
 gi|88188208|gb|ABD41205.1| CoA-binding protein [Methanospirillum hungatei JF-1]
          Length = 687

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 32/231 (13%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           E++   +L ++ + +     ++S   A  A + L  P+   VV  Q+            +
Sbjct: 8   EFEGYRILHEHGISIPDYSFVTSHEDALKAAEKLGYPVVIKVVSPQV------------I 55

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV +  S    I     ++      K   P  + ++   V        E  +  
Sbjct: 56  HKSDAGGVALNLSCPDAIQTA--LVQMDNRVKAAVPD-AEISGYMVVQEVPSGTEFLIGG 112

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS------LCDM 176
            +D + G +  +    GG+ +E +       +  L + P      E +        +   
Sbjct: 113 RIDPSFGKIITVG--MGGILVELLHD---FSMRVLPVSPDE--YREMIREMSGYKLITGF 165

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKI 226
              +        +L       F + D +   +INP+I+ + G    +D+++
Sbjct: 166 RGRKPLDEDALVELLQKAGTMFFEDDRIIEFDINPVILYEKG-AYAVDARM 215


>gi|541242|pir||S42876 probable succinate-CoA ligase (ADP-forming) (EC 6.2.1.5) beta
          chain - Coxiella burnetii (fragment)
          Length = 35

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAI 35
          MN+HEYQ+K LL KYN+ V    V+ +  AA  A 
Sbjct: 1  MNLHEYQSKYLLNKYNIAVPASEVVFNPDAAVDAA 35


>gi|282895347|ref|ZP_06303548.1| GCN5-related N-acetyltransferase [Raphidiopsis brookii D9]
 gi|281199598|gb|EFA74459.1| GCN5-related N-acetyltransferase [Raphidiopsis brookii D9]
          Length = 993

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK 46
           + E+++K +L  Y +PV  G +  S   A    + +  P+ V+K
Sbjct: 582 LTEFESKEILAAYGIPVVGGSIAQSPEEAVEWAEKIGYPV-VLK 624



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 29/143 (20%)

Query: 271 CMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKVA 309
            + N  G  +   D +   GG  A                     N +D+ G AD  +  
Sbjct: 394 ILTNAGGPGVLATDSLIESGGELAVISPQTMENLNHILPPQWSHNNPIDILGDADPQRYT 453

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK---EVKINIPLVMRLEGANVDI 366
            A +I + DS+  G+L+ +     +       I   +K   +++    L   + G ++  
Sbjct: 454 KALQIASEDSNSDGLLVIL---TPQAMTDPTRIAQELKPYSQMQGKPILASWMGGDDIAE 510

Query: 367 GNRLIAESGLNVITAIDLDDAAQ 389
           G +++   G+   +  D   AA+
Sbjct: 511 GKKILNLEGIPTYSYPDT--AAR 531


>gi|15668770|ref|NP_247570.1| hypothetical protein MJ_0590 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496062|sp|Q58010|Y590_METJA RecName: Full=Uncharacterized protein MJ0590
 gi|1591298|gb|AAB98580.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 704

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 15/133 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY-VVKSQIHAGGRGKGRFKELP 63
           EY AK LL  Y +PV KG +  +   A    K L   +  +V  QI       G      
Sbjct: 491 EYTAKKLLSIYGLPVPKGYLAKNEDEALEYCKKLGKCVMKIVSPQIIHKTEAGGVIINPK 550

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLSL 122
              +   ++   +++     + +          G     +  V VE+  +    E+ +  
Sbjct: 551 NPKEAFKKL---IENAKEYAKRM----------GIDNLIIEGVLVEEFIEKDMMEIIIGA 597

Query: 123 LVDRTSGMVAFIA 135
             D   G V  + 
Sbjct: 598 KRDDIFGSVVMVG 610



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 25/141 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            IG + N  G  +   D    Y    +NF                     LD+ G A  +
Sbjct: 299 EIGIITNAGGFGVLAADSCVDYNMKLSNFEKSTIEKLKNILPPTANISNPLDIIGDATPE 358

Query: 307 KVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGIL---SAVKEVKINIPLVMRLEGA 362
           +     +++  DS+VKG+L+ +    + +   + K I+   ++ KE K    +   + G 
Sbjct: 359 RYKKVIEVLAEDSNVKGLLVILTPQEMTKPLEVAKSIIEVKNSHKEFKNKPLITSFVGGV 418

Query: 363 NVDIGNRLIAESGLNVITAID 383
           +V      + ++G+      +
Sbjct: 419 SVKGAKSYLRKNGIPAYITPE 439


>gi|152974119|ref|YP_001373636.1| phosphoribosylamine--glycine ligase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022871|gb|ABS20641.1| phosphoribosylamine--glycine ligase [Bacillus cytotoxicus NVH
           391-98]
          Length = 423

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A     +    A + IK +  P+ V+K+   A G+             
Sbjct: 106 AKELMKKYDIPTAAYETFTDYEEAVAYIKKVGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+  +   RE+L            G     + +E+  D  +E  L   V+ T
Sbjct: 152 -GVTVAMTLEEALEAAREML-------HDVKFGESSKKIVIEEFLD-GQEFSLMAFVNGT 202

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 203 TVHPMVIA 210


>gi|225181233|ref|ZP_03734678.1| CoA-binding domain protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168013|gb|EEG76819.1| CoA-binding domain protein [Dethiobacter alkaliphilus AHT 1]
          Length = 716

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 76/228 (33%), Gaps = 24/228 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EYQAK +L  Y +PV +  +      A  A + L  P+ +  S      + +     L
Sbjct: 508 LDEYQAKQVLAAYGIPVTRERLAHCAQEAAEAAQKLGFPVVLKASSPDIAHKTEQGLVHL 567

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              +   V+   S                        GS+V  V V +     REL L+ 
Sbjct: 568 NLKTVDDVKQAYSA------------------VIAAAGSQV-PVLVAEMVQGQREL-LAG 607

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQG 181
           +          +    GG+  E +     +       +    +T     A L     +  
Sbjct: 608 MSRFPGFGPCIMF-GIGGIFTEAIKDVTFRAAPLTETEAEEMLTDIRTAALLQQFRGMPA 666

Query: 182 QARIDGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   L   L + A     ++ ++INP+++  + R   +D+ I  
Sbjct: 667 AETAELARLLRKLGELALLHPRIAEIDINPIVLSGS-RPVAVDALIVL 713


>gi|34499131|ref|NP_903346.1| acetyl-CoA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|34104982|gb|AAQ61338.1| probable acetyl-CoA synthetase [Chromobacterium violaceum ATCC
           12472]
          Length = 891

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 24/232 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  +++PV    +  +   A      +  P+ V+K               +
Sbjct: 489 LSERESKQVLAAFHIPVNPTTLARTADQAVKQAAKIGYPV-VLKID---------SPDII 538

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD--ILRELYL 120
                GGV +  S +  +    E + S   T+Q  P  +R++ V V+        REL +
Sbjct: 539 YKSDVGGVELNISNEETLRAAFEAIVSR--TRQARPE-ARIDGVSVQPMRKRRFARELMV 595

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +   R +G+   IA   GG+ +E   ++A   P     L +D +IG  +     L    
Sbjct: 596 GVA--RDAGLGPVIAFGAGGIAVEVMRDLALSLPPLNDYL-VDSMIG-QTRIGQLLGPFK 651

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            L      +   +   + +  C+   +  ++INPL+  + G +  LD++I  
Sbjct: 652 NLPPVDVDELRHVLLQVSEMVCELPQLREMDINPLVADEQG-VIALDARIFV 702


>gi|118476050|ref|YP_893201.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis str. Al
           Hakam]
 gi|225862338|ref|YP_002747716.1| phosphoribosylamine--glycine ligase [Bacillus cereus 03BB102]
 gi|118415275|gb|ABK83694.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis str. Al
           Hakam]
 gi|225790027|gb|ACO30244.1| phosphoribosylamine--glycine ligase [Bacillus cereus 03BB102]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|86136858|ref|ZP_01055436.1| acyl-CoA synthetase, putative [Roseobacter sp. MED193]
 gi|85826182|gb|EAQ46379.1| acyl-CoA synthetase, putative [Roseobacter sp. MED193]
          Length = 682

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 80/243 (32%), Gaps = 45/243 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E +AK  L  Y + V K +   S  AA +A   +  P+ +           KG     
Sbjct: 477 ISEAEAKQRLSDYGLRVPKSIRAKSPGAARAAAADIGYPVVL-----------KGEGVAH 525

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLS 121
             ++   V    S  +V     ++                     VE+     + EL + 
Sbjct: 526 KTEAGAVVLNLHSGAAVSESASQM---------------PAQRFLVEEMVTGAVAELLIG 570

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           ++ D   G V  +A+  GG   E +       I     D    +    VA L   +  +G
Sbjct: 571 VVKDPAHGFVLTLAA--GGTLTEILQDSTSLLIPASETDVNAALDRLKVAKLL--VGYRG 626

Query: 182 QARIDGGDLFPNLYKA--FCDKD---MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           Q   D   +   +     +   D   +  +EINPL+    G +           +AL R 
Sbjct: 627 QPAADRAAILQAVQAVQDYVQADPIGLEEIEINPLLCTPEGAVAA---------DALMRR 677

Query: 237 LDI 239
            DI
Sbjct: 678 KDI 680


>gi|329765910|ref|ZP_08257475.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137616|gb|EGG41887.1| CoA-binding domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 698

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 93/232 (40%), Gaps = 22/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E + + +L+ Y +P+ K  +  +   A    K +  P+ +               + 
Sbjct: 484 NLLEEEGQEVLKAYGLPLPKSALAKTEADAIKIAKQIGYPVVM----------KIASPQI 533

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           +     GGV+V  +     S+I+E   + +   +     + +  V + +     +EL + 
Sbjct: 534 IHKSDAGGVKVNLTND---SEIKEAFKTIIANAKKYNKNAEIKGVLIVEMVKGGKELIIG 590

Query: 122 LLVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             ++   G V  +    GG+ +E   +V         K   D +  + ++ +  L  +  
Sbjct: 591 SKLEPGFGPVIMLG--MGGIYVEVLKDVTFKLAPVTDKEADDMIASIKTQKL--LQGVRG 646

Query: 179 LQGQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +        +    L +   D K++  L++NP+++M+ G+  ++LD +I  
Sbjct: 647 EKPSDIAKLSECIQRLSQLVTDFKEIKELDMNPVLVMEKGKGCKILDVRIGL 698


>gi|229089414|ref|ZP_04220685.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-42]
 gi|228693891|gb|EEL47583.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-42]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|228995653|ref|ZP_04155316.1| Phosphoribosylamine--glycine ligase [Bacillus mycoides Rock3-17]
 gi|228764030|gb|EEM12914.1| Phosphoribosylamine--glycine ligase [Bacillus mycoides Rock3-17]
          Length = 421

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     ++   A + I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTNYEEAVAYIRKIGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|228989458|ref|ZP_04149444.1| Phosphoribosylamine--glycine ligase [Bacillus pseudomycoides DSM
           12442]
 gi|229003282|ref|ZP_04161112.1| Phosphoribosylamine--glycine ligase [Bacillus mycoides Rock1-4]
 gi|228757900|gb|EEM07115.1| Phosphoribosylamine--glycine ligase [Bacillus mycoides Rock1-4]
 gi|228770279|gb|EEM18857.1| Phosphoribosylamine--glycine ligase [Bacillus pseudomycoides DSM
           12442]
          Length = 421

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     ++   A + I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTNYEEAVAYIRKIGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|217970133|ref|YP_002355367.1| CoA-binding protein [Thauera sp. MZ1T]
 gi|217507460|gb|ACK54471.1| CoA-binding domain protein [Thauera sp. MZ1T]
          Length = 901

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 90/261 (34%), Gaps = 28/261 (10%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E ++K +L  Y VPV +  + ++   A      +  P+ +  + +    R K     
Sbjct: 495 SLTESESKDVLAAYGVPVIQTHLAATPEEAAQIAGRIGLPVAL--TLMSRDIRRKWDV-- 550

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT----GSRVNCVYVEDGADILRE 117
                 GGV +       +       G      +  P     G  V    V  G    R+
Sbjct: 551 ------GGVALNLESTEAVQVAAR--GMIERAGRAEPPVSVSGFTVQR-MVMRG--HARQ 599

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEV---AKDYPQKIFKLLIDPLIGVTSEDVASLC 174
           L + +  DR  G    +   +GG  +E     A   P     L  D +    S+  A L 
Sbjct: 600 LLIGVSTDRLFG-PVIVF-GEGGRALEIFRGLAVGLPPLNKPLADDLIT--RSKAAALLE 655

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
               L    R         + +   D  ++  ++INP+ + ++G ++ LD+ +       
Sbjct: 656 ARSHLPAADRDALALTLTKVSQIVVDHPEIHEMDINPVFVDEHG-VQALDAHMRLRPATA 714

Query: 234 YRHLDIQELRDVSEEDSREIE 254
           + H    +    + E+   + 
Sbjct: 715 HEHRLAIQPYPKALEEPSRLR 735


>gi|300118919|ref|ZP_07056630.1| phosphoribosylamine--glycine ligase [Bacillus cereus SJ1]
 gi|298723535|gb|EFI64266.1| phosphoribosylamine--glycine ligase [Bacillus cereus SJ1]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|196040097|ref|ZP_03107399.1| phosphoribosylamine--glycine ligase [Bacillus cereus NVH0597-99]
 gi|196028952|gb|EDX67557.1| phosphoribosylamine--glycine ligase [Bacillus cereus NVH0597-99]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|154245686|ref|YP_001416644.1| GCN5-related N-acetyltransferase [Xanthobacter autotrophicus Py2]
 gi|154159771|gb|ABS66987.1| GCN5-related N-acetyltransferase [Xanthobacter autotrophicus Py2]
          Length = 903

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 83/237 (35%), Gaps = 30/237 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKE 61
           + E +AK +L  Y++PV +  V ++   A      +  P+ VVK   H    +       
Sbjct: 491 LSEVEAKTVLCAYDIPVVETRVAATPEDAGRCAAEIGWPV-VVKVLSHDLTHKSDVGGVR 549

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L   S   V        + S   +  G+ +          R N           +EL   
Sbjct: 550 LDLRSSAAVEDAC-RAIIASVAEKRPGAHIAGFTVQAMVRRPN----------AQELIAG 598

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLC 174
           +  D+T G V      QGG  +E +          + + PL GV + +          L 
Sbjct: 599 IAYDKTFGPVVLFG--QGGTAVEVIGDRA------VALPPLNGVLAREMIERTRVAKLLA 650

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
              +               L +   D   ++ L+INPL+  +NG +  LD++I   +
Sbjct: 651 GYRDHPPADMGAVAGTLVKLAELLADLPQIAELDINPLLADENG-VIALDARIVVHE 706


>gi|229182682|ref|ZP_04309923.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BGSC 6E1]
 gi|228600767|gb|EEK58346.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BGSC 6E1]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|196045253|ref|ZP_03112485.1| phosphoribosylamine--glycine ligase [Bacillus cereus 03BB108]
 gi|196023837|gb|EDX62512.1| phosphoribosylamine--glycine ligase [Bacillus cereus 03BB108]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|84501817|ref|ZP_00999975.1| putative pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389812|gb|EAQ02446.1| putative pimeloyl-CoA synthetase [Oceanicola batsensis HTCC2597]
          Length = 715

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 78/223 (34%), Gaps = 20/223 (8%)

Query: 5   EYQAKALLRKY-NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           E+ +K LL    ++    GV  +     +    +L  P  VVK Q               
Sbjct: 496 EHLSKDLLCDATSLQRPVGVFATDADQLKKVGASLTAP-LVVKLQ--------SPEMLHK 546

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           + S G      S+++     R+++      +     G  V+ V VE+      E  + L 
Sbjct: 547 SGSGGIALGLESVEAAAEAARKMI------ESATERGISVDGVLVEEMVPFDHEFIVGLR 600

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQ 182
            D   G +  +   +GG+ +E         +          + S   A L +     +  
Sbjct: 601 CDPVFGPMLVLG--RGGVTVELEPDVTRAFLPLTAEQIEDLIRSLRAAPLLEGFRGAKPC 658

Query: 183 ARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDS 224
                      L   +  D+ +S +EINPL+  +NGR   LD+
Sbjct: 659 DIAGLARTVKELCDLYLSDETLSEIEINPLVADRNGRFVALDA 701


>gi|307352932|ref|YP_003893983.1| CoA-binding domain-containing protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156165|gb|ADN35545.1| CoA-binding domain protein [Methanoplanus petrolearius DSM 11571]
          Length = 702

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 83/233 (35%), Gaps = 26/233 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +   LL ++ +P  +  +  S   A    + L  P+ V+K                 +D+
Sbjct: 24  EGYRLLDRFGIPHPEYGLAHSEDEAAGIAENLGFPV-VMKV--------ISPDIIHKSDA 74

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G V    S          I+ ++L        G+ +  V VE  A    E+ +    D 
Sbjct: 75  GGVVLDIGSAGEAREAYSRIIRNSLSAV----PGALIEGVIVEKSARPGLEIIVGGKTDP 130

Query: 127 TSGMVAFIASTQGGMDIEE-----VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
             G      +    + I +     +    P+K  K+    + G+ +  +  +      + 
Sbjct: 131 AFGKTLTFGTGGTNVSIYKDVSFAILPLTPEKAKKM----IRGIRAFPL--IRGYRGSKP 184

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
           +   +   +  +  + F +   +S  +INPL + + G    +D+   FD++ +
Sbjct: 185 KDEAEMVRILVSAARMFGETPGLSEFDINPLRLYEEG-ACAIDTAFIFDESTV 236


>gi|163849442|ref|YP_001637486.1| acetyl coenzyme A synthetase subunit alpha [Chloroflexus
           aurantiacus J-10-fl]
 gi|222527446|ref|YP_002571917.1| acetyl coenzyme A synthetase alpha domain-containing protein
           [Chloroflexus sp. Y-400-fl]
 gi|163670731|gb|ABY37097.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Chloroflexus aurantiacus J-10-fl]
 gi|222451325|gb|ACM55591.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Chloroflexus sp. Y-400-fl]
          Length = 696

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 38/238 (15%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A+ ++  Y + + K  +  +   A +       P+ +                 L  
Sbjct: 484 EVEAREVIEAYGMRLPKSRLAQTPDEAVAIANEFGYPVVM----------KISSPDILHK 533

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGVRV  S  S + D  E++       +     +R+  V V++     RE+ + +  
Sbjct: 534 SDIGGVRVGLSDASAVRDAFELIEYR---ARKYLPSARIWGVLVQEMVRKGREVLVGVSR 590

Query: 125 DRTSGMVAFIASTQGGMDIEEVA-----------KDYPQKIFKLLIDPLI-GVTSEDVAS 172
           D   G    IA   GG+ +E +            ++  ++I  +   PL+ GV  E  A 
Sbjct: 591 DPQFG--PLIAVGMGGIYVEVLKDVAFRLAPLSVEEVQEQIRSIRAYPLLRGVRGEAPAD 648

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISFD 229
           +         A  +       L   F +  +  ++INPL++   G    VLD++I  +
Sbjct: 649 IA--------AIEETVLRVSQLVTDFPE--IVEMDINPLVVHHEGEGAVVLDARIILN 696


>gi|209966034|ref|YP_002298949.1| acetyltransferase [Rhodospirillum centenum SW]
 gi|209959500|gb|ACJ00137.1| acetyltransferase [Rhodospirillum centenum SW]
          Length = 900

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 80/231 (34%), Gaps = 23/231 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EYQAK +LR Y +P  + V  ++   AE A + L G + +                  
Sbjct: 493 LSEYQAKEVLRAYGIPCVQTVTAATPAEAERAARRLGGRIAL----------KILSPDIT 542

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
                GGV +  +   V ++   +L        T     R+    V++ A      EL +
Sbjct: 543 HKSDLGGVALNLAPNQVWAEAEAMLERVRSFMPTA----RIEGFTVQEMAHRPDAHELIV 598

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLE 178
            ++ D   G V    +   G+   EV  D    +  L ++    + S       L     
Sbjct: 599 GMIDDELFGPVILFGAGGTGV---EVVADKELGLPPLNMNLAREMMSRTRIHRLLLGYRS 655

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                          + +   D  ++  L+INPL     G +  LD++I  
Sbjct: 656 RPKADLDAIALSLIKVSQLVTDFPEIVELDINPLFADDKG-VLALDARIKV 705



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 65/191 (34%), Gaps = 31/191 (16%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IGCMVNGAGLAMATMDIIKLY 289
           +A +R      +  VSE D    +A +   + + + G+ +  + NG G+ +   D +   
Sbjct: 268 DAAFRR---AGMLRVSELDE-LFDAVETLATGVQIKGDRLAILTNGGGIGVLATDALVGQ 323

Query: 290 GGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI-N 327
           GG  A                     N +D+ G A   + A A  I+  D     +L+ N
Sbjct: 324 GGRLAALTPETLEKLGRVLPPTWSHGNPVDIIGDAPGKRYADALGILLEDPGCDAVLVMN 383

Query: 328 IFGGIMRCDVLVKGILSAVKEVKINIPLVM--RLEGANVDIGNRLIAESGLNVITAIDLD 385
               +         ++S +K        V+   L         R  A+  +      +  
Sbjct: 384 CPTAVADSVDAADAVVSVLKAKGNKRTPVLTSWLGETAAAEARRQFAKQRIPDYHTPN-- 441

Query: 386 DAAQKIVHAVK 396
            A +  +H V+
Sbjct: 442 QAVRAFMHLVR 452


>gi|118575373|ref|YP_875116.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A]
 gi|118193894|gb|ABK76812.1| acyl-CoA synthetase (NDP forming) [Cenarchaeum symbiosum A]
          Length = 688

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 80/241 (33%), Gaps = 43/241 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           I E  AK++L+ Y + V    ++ S   A    K +  PL   VV  QI           
Sbjct: 2   ITEEDAKSILKSYGLKVPDYALVGSADEAARQAKKIGFPLVMKVVSPQIL---------- 51

Query: 61  ELPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  GGV+V   ++  V     E+ G     +     G  +  +   DG     EL 
Sbjct: 52  --HKTDVGGVKVGLDNVNDVKKTFTEMYGRLSKRRGVKVKGILLEKMMPRDGV----ELI 105

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-- 177
           + L  D   G    +    GG+  E +     + +          +T  D  S+   L  
Sbjct: 106 VGLQNDPQFG-PVIMV-GMGGVLTEVMRDVSFRMLP---------ITVSDARSMLKELKG 154

Query: 178 -----ELQGQARIDGGDLFPNLYK-----AFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
                  +G   +D   L   L +              ++ NP+++       VLD+KI 
Sbjct: 155 SRMLRGFRGSKAVDLVMLAKALVQIGRMGMASAAYFESIDFNPVMVYP-KSYSVLDAKII 213

Query: 228 F 228
            
Sbjct: 214 L 214


>gi|49479085|ref|YP_034621.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49330641|gb|AAT61287.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|254168144|ref|ZP_04874991.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Aciduliprofundum boonei T469]
 gi|197622910|gb|EDY35478.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Aciduliprofundum boonei T469]
          Length = 711

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 25/232 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK +   Y +PV KG +  +   A    + +  P+ +                 +
Sbjct: 482 LTEPEAKEVFAAYGLPVPKGKLAHNPEEAVKIARAVEYPVVM----------KIVSPNIV 531

Query: 63  PADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                GGV+V   S   V    +EI+ +     +     + +  VYV+       E  + 
Sbjct: 532 HKSDAGGVKVNIKSDDEVRKAFQEIIEN----AERYDPHAEIMGVYVQHMEPWGTETIIG 587

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSEDVASLCDMLE 178
            + D   G         GG+ +E +     +         +D +  +    +        
Sbjct: 588 SINDSQFGPTVMFG--LGGIFVEILKDVTFRIAPFSKDEALDMVKEINGYGILKGAR--G 643

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISF 228
            + +      +    L +   D    + E+  NP+I+ + G L V+D++I  
Sbjct: 644 EKPKDIEAIAEAVSRLSQLVWDFRDVIKEVDANPVIVYEKG-LSVVDARIIL 694



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 28/174 (16%)

Query: 232 ALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           A ++   +    ++    D     A Q  +    L      + NG G+ +   D  + YG
Sbjct: 263 AAFKQGHVVWAENLDALFDETMALALQKPMRGDNL----LIITNGGGVGVLATDAAEKYG 318

Query: 291 ---------------------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
                                G P N +D+ G AD+ +   + +       V G+++   
Sbjct: 319 VPIKDAPDDLKLLMFKHMPEFGNPKNPVDLTGMADRPEYEGSIRDALKHDWVDGVVVLYC 378

Query: 330 -GGIMRCDVLVKGILSAVKEVKINIPLVMRL-EGANVDIGNRLIAESGLNVITA 381
                    + +GI  A K+  ++ P+ + L  G         + E+G+    +
Sbjct: 379 ETSFTDPQNIAEGIYKAYKDSGVDKPIAVSLVGGERSVKAGEWLIENGIPYYNS 432


>gi|228913027|ref|ZP_04076666.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846432|gb|EEM91445.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 423

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|332157984|ref|YP_004423263.1| succinyl-coa synthetase, beta subunit related protein [Pyrococcus
           sp. NA2]
 gi|331033447|gb|AEC51259.1| succinyl-coa synthetase, beta subunit related protein [Pyrococcus
           sp. NA2]
          Length = 232

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 73/222 (32%), Gaps = 18/222 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +AK +L+ Y +PV +  V      A    + +  P+ +     H   +      ++    
Sbjct: 25  EAKEILKLYGIPVPEFKVARDEEEAVKFSREIGYPVVMKIVSPHIIHKSDAGGVKIN--- 81

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                   +        R I+ +     +     + +  V +     + RE+ + ++ D 
Sbjct: 82  ------IKNDDEAREAFRTIMENV----RKYKPDADLWGVIIYRMLPLGREVIVGMIRDP 131

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQARI 185
             G         GG+ +E +     +       D L  +       +       +     
Sbjct: 132 QFGPAVMFG--LGGIFVEILKDVSFRVAPITKEDALEMIKEIKAYPILAGARGEKPVNID 189

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
              D+   + +   +  ++  L+INP+   ++     +D+++
Sbjct: 190 ALADIIVKVGELALELPEIRELDINPIFAYED-EAVAVDARM 230


>gi|196034571|ref|ZP_03101979.1| phosphoribosylamine--glycine ligase [Bacillus cereus W]
 gi|228944096|ref|ZP_04106475.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229119946|ref|ZP_04249201.1| Phosphoribosylamine--glycine ligase [Bacillus cereus 95/8201]
 gi|254724759|ref|ZP_05186542.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A1055]
 gi|195992614|gb|EDX56574.1| phosphoribosylamine--glycine ligase [Bacillus cereus W]
 gi|228663412|gb|EEL18997.1| Phosphoribosylamine--glycine ligase [Bacillus cereus 95/8201]
 gi|228815485|gb|EEM61727.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 423

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|116694312|ref|YP_728523.1| Acyl-CoA synthetase [Ralstonia eutropha H16]
 gi|113528811|emb|CAJ95158.1| Acyl-CoA synthetase [Ralstonia eutropha H16]
          Length = 721

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 67/230 (29%), Gaps = 24/230 (10%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGRFKELPA 64
            KALL    V V  GVV +S   A  A +          V+K    A             
Sbjct: 499 GKALLASAGVTVPGGVVATSADEAAQAFRNAAAQGTGKVVMKIVSAA--------ITHKT 550

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           D  G     +S  +  +   EI  +            R+  V VE        E  + + 
Sbjct: 551 DIGGVRLGIASEDAARAAFEEIYAN----GCKAAPADRIEGVLVEPMLPSPFVEAVVGIH 606

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQ 182
            D   G V       GG+ IE       + +          +       L          
Sbjct: 607 RDEVFGHVCTFG--LGGVAIELFKDVSRRLLPLTPQSARAMIAETRCHELLKGHRGQTPF 664

Query: 183 ARIDGGDLFPNLYKAFCDKDM---SLLEINPLIIMKNGR-LRVLDSKISF 228
                 D    L   F  +       LEINPL +   G+ +  LD+ I+F
Sbjct: 665 DIDALADTLVKLSD-FVARHADRIDELEINPLAVRPQGQGVVALDAVIAF 713


>gi|30260472|ref|NP_842849.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. Ames]
 gi|47525562|ref|YP_016911.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183314|ref|YP_026566.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str.
           Sterne]
 gi|65317724|ref|ZP_00390683.1| COG0151: Phosphoribosylamine-glycine ligase [Bacillus anthracis
           str. A2012]
 gi|165871412|ref|ZP_02216060.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0488]
 gi|167634136|ref|ZP_02392458.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0442]
 gi|167640069|ref|ZP_02398336.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0193]
 gi|170688336|ref|ZP_02879545.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0465]
 gi|170708735|ref|ZP_02899172.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0389]
 gi|177653662|ref|ZP_02935801.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0174]
 gi|190567335|ref|ZP_03020249.1| phosphoribosylamine--glycine ligase [Bacillus anthracis
           Tsiankovskii-I]
 gi|190567589|ref|ZP_03020502.1| phosphoribosylamine--glycine ligase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227812964|ref|YP_002812973.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. CDC
           684]
 gi|229601995|ref|YP_002864917.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0248]
 gi|254686683|ref|ZP_05150541.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str.
           CNEVA-9066]
 gi|254739092|ref|ZP_05196794.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str.
           Western North America USA6153]
 gi|254742286|ref|ZP_05199972.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. Kruger
           B]
 gi|254756062|ref|ZP_05208091.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str.
           Vollum]
 gi|254761879|ref|ZP_05213728.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str.
           Australia 94]
 gi|30253840|gb|AAP24335.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. Ames]
 gi|47500710|gb|AAT29386.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49177241|gb|AAT52617.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str.
           Sterne]
 gi|164712896|gb|EDR18425.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0488]
 gi|167511880|gb|EDR87259.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0193]
 gi|167530450|gb|EDR93165.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0442]
 gi|170126314|gb|EDS95204.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0389]
 gi|170667668|gb|EDT18422.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0465]
 gi|172081242|gb|EDT66317.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0174]
 gi|190561376|gb|EDV15348.1| phosphoribosylamine--glycine ligase [Bacillus anthracis
           Tsiankovskii-I]
 gi|190561462|gb|EDV15433.1| phosphoribosylamine--glycine ligase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227007751|gb|ACP17494.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. CDC
           684]
 gi|229266403|gb|ACQ48040.1| phosphoribosylamine--glycine ligase [Bacillus anthracis str. A0248]
          Length = 423

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|119719515|ref|YP_920010.1| CoA-binding domain-containing protein [Thermofilum pendens Hrk 5]
 gi|119524635|gb|ABL78007.1| CoA-binding domain protein [Thermofilum pendens Hrk 5]
          Length = 704

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 18/217 (8%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y +PV    +  S   A    + +  P+ +           +       +D  G +    
Sbjct: 500 YGIPVLAKKIAKSPEEAVRIAREIGYPVVL---------EVESPDILHKSDIGGILVGLQ 550

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S   V     +IL +           +RVN + V   A+  +E+ L +  D   G +  +
Sbjct: 551 SDAEVAEGYSKILDNV----SKKAPSARVNGIIVRKMAEKGKEIALGVHRDPIFGPLVMV 606

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
            S  GG+ +E       +     L D    +    +  +                D+   
Sbjct: 607 GS--GGVLVELYRDVSFRVAPLSLEDAYEMLEETKIYKVLKGYRGEPPSDYEKVVDVLIR 664

Query: 194 LYKAFCD-KDMSLLEINPLIIMKNGR-LRVLDSKISF 228
           L K  CD +++  ++INP  + + G+    +D K++ 
Sbjct: 665 LSKLACDVEEIEDIDINPFFVYERGKGGIAVDVKVTL 701


>gi|229028138|ref|ZP_04184280.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH1271]
 gi|228733156|gb|EEL83996.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH1271]
          Length = 423

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTN 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|224367413|ref|YP_002601576.1| hypothetical protein HRM2_02900 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690129|gb|ACN13412.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 730

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 22/224 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AK L+  + +PV     +SS   A  A   L  P+ V+K+               
Sbjct: 22  LLEDDAKKLIAGFGIPVVDEHRVSSADEAVRAAYDLGFPV-VLKAM---------GATLT 71

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               KG VRV  + +   +D+RE          T   G  +  + VE      RE    +
Sbjct: 72  HKTEKGLVRVGLAGE---ADVRE-----AAATLTALAGDALEFLLVEPQIMGKREFVAGI 123

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G V       GG+  E +     +       D    + S     L         
Sbjct: 124 FRDPQFGPVVMFG--LGGVFTEALDDVVFRLSPLNPFDMDQMLESIASKQLLGKFRGDAP 181

Query: 182 QARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDS 224
             R     +   L        +   ++INPLI+   G +  +D+
Sbjct: 182 ADRTALLSVLKGLSDIAERLPLVREIDINPLIVTPEGGIVAVDA 225


>gi|42779409|ref|NP_976656.1| phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 10987]
 gi|42735325|gb|AAS39264.1| phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 10987]
          Length = 423

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTN 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|282163118|ref|YP_003355503.1| acetyl-CoA synthetase beta subunit [Methanocella paludicola SANAE]
 gi|282155432|dbj|BAI60520.1| acetyl-CoA synthetase beta subunit [Methanocella paludicola SANAE]
          Length = 213

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 76/236 (32%), Gaps = 29/236 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E +AK LL  Y +PV +G    S   A  A + +  P  V         +      
Sbjct: 1   MMLSELEAKELLAGYGIPVNEGRAACSAIEASEAARHIGFPAVVKVLSEKIVHKSDLGLV 60

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L            +   V  +   IL          P    V    VE  A    E+ +
Sbjct: 61  ALNL---------CNPSDVGRNAERILAK---AHTIDPDAKVV----VESMAPQGTEVIV 104

Query: 121 SLLVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
               D   G    +    G       D+        + +   +ID + G      A L  
Sbjct: 105 GARRDPQFG-PTILFGLGGIFVEVFKDVSIRVAPVDRAMAMDMIDDVKGY-----AILKG 158

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
               +G       D+  N  K   ++D +  L++NP++  +NG    +D++    D
Sbjct: 159 ARGKKGVDIEALADIIVNTSKLMMEQDRVMELDMNPVMAYENG-AMAVDARALVRD 213


>gi|319942556|ref|ZP_08016865.1| hypothetical protein HMPREF9464_02084 [Sutterella wadsworthensis
           3_1_45B]
 gi|319803852|gb|EFW00774.1| hypothetical protein HMPREF9464_02084 [Sutterella wadsworthensis
           3_1_45B]
          Length = 746

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 74/230 (32%), Gaps = 18/230 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++  +L    V   +  +  S   A      +  P+ +  +      +       +    
Sbjct: 529 ESLEVLDACGVRTCRSGMAHSEAEAVELAARVGYPIVMKMTSKSTSHKTDVGGVRVGIAD 588

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +  +R E        + + +L         G  G     V +++     REL   +  D 
Sbjct: 589 EAQLRAEYQDLLAKLEAKGLL--------EGLEG-----VIIQEMVKSKRELVTGIATDP 635

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
             G    +    GG+ +E +     +      ID    + S     L +    +      
Sbjct: 636 QMG-PMIMFGL-GGVFVEVLKDVAFRIAPLTDIDAQELIRSVKAVKLLEGARGMIPAQMD 693

Query: 186 DGGDLFPNLYKAFCDKDM-SLLEINPL-IIMKNGRLRVLDSKISFDDNAL 233
              D    + +          L+INPL +  K+G    +D++I+ D +A+
Sbjct: 694 KVEDTLLRISQLADQHRFVKELDINPLMVSDKDGEPIAVDARIAIDVDAV 743


>gi|14521495|ref|NP_126971.1| hypothetical protein PAB0854 [Pyrococcus abyssi GE5]
 gi|5458714|emb|CAB50201.1| acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain
           [Pyrococcus abyssi GE5]
          Length = 457

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 28/158 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  M N  G  + T D +   G   AN                      +D+   A  +
Sbjct: 295 RVAIMTNAGGPGVLTADELDKRGLKLANLEEKTIEELRSFLPPMAAVKNPVDMIASARGE 354

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR-LEG 361
                 K++  D +V  +    ++  F G+   +   +GI+ A+KEV    P++   + G
Sbjct: 355 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTPTEH-AEGIIRAIKEVNNGKPVLAMFMAG 413

Query: 362 ANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
              +    L+ ++G+       D+  AA  +V   K V
Sbjct: 414 YVSEKAKELLEKNGIPTYERPEDVASAAYALVEQAKNV 451


>gi|126738394|ref|ZP_01754099.1| acyl-CoA synthetase, putative [Roseobacter sp. SK209-2-6]
 gi|126720193|gb|EBA16899.1| acyl-CoA synthetase, putative [Roseobacter sp. SK209-2-6]
          Length = 678

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 76/241 (31%), Gaps = 45/241 (18%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK  L  Y + V K +   S  +A +    +  P+ +           KG       
Sbjct: 475 EAEAKQRLSDYGLRVPKSIRARSPGSARAVAADIGYPVVL-----------KGEGVAHKT 523

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           ++   V   +S  +V     ++                     VE+     + EL + ++
Sbjct: 524 EAGAVVLNLTSGGAVSEAASQM---------------PAERFLVEEMVTGAVAELLVGVV 568

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D   G V  +A+  GG   E +       I          +    VA +      +GQ 
Sbjct: 569 KDPAHGFVLTLAA--GGTLTEILGDSTSLLIPASEASVNAALDRLKVAKML--AGYRGQP 624

Query: 184 RIDGGDLFPNLYKA--FCDKD---MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
             D   +   +     +   D   +  +EINPL+      +           +AL R  D
Sbjct: 625 AADRAAILRAVQAVQDYVQADPVGLEEIEINPLLCTPEDAVAA---------DALMRRKD 675

Query: 239 I 239
           I
Sbjct: 676 I 676


>gi|83589248|ref|YP_429257.1| CoA-binding [Moorella thermoacetica ATCC 39073]
 gi|83572162|gb|ABC18714.1| CoA-binding protein [Moorella thermoacetica ATCC 39073]
          Length = 707

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 22/231 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
           N+ E +A  +LR Y + +  G +  S   A    + +  P+   +V  QI          
Sbjct: 493 NLLEPEAIEVLRDYGIKMQPGRITHSREEAVRCAQEIGYPVVLKIVSPQIV--------- 543

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
               +D  G      + + V     E+    + + Q     + +  V V        E+ 
Sbjct: 544 --HKSDYGGVKLNLQTAEEVGRAYEEL----IASVQAKAPTAEIKGVLVTPFVSGGTEVI 597

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           + +L D   G V       GG+ +E       +       + L  +      +L   +  
Sbjct: 598 IGVLRDNQFGPVVMFG--LGGIFVEVFKDVSFRVAPFSREEALSMIAETKAYTLLKGIRG 655

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            Q +      DL   + +       +  +++NP+ +++ G   VLD ++  
Sbjct: 656 GQPKDITALADLLVKIGELAISNPQVKEMDLNPVAVLEEG-FAVLDVRMII 705



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 53/109 (48%), Gaps = 10/109 (9%)

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG---GIMRCDVLVKGILSAVKE 348
            P  ++D+   A + + A A +++  D +V  +L+   G     +  + + + I +  K 
Sbjct: 356 KPNGYIDMTAAAMEREHAEALRLVLEDPNVDAVLL--IGLPPTFLPAERVAQAIAAVAK- 412

Query: 349 VKINIPLVMR-LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            K + P+++  + G  ++ G R + E G+   T    D AA+ +++ +K
Sbjct: 413 -KYDKPVLVCFMTGKAMEDGRRYLEERGIP--TFDTPDRAARALINLIK 458


>gi|85859779|ref|YP_461981.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Syntrophus aciditrophicus SB]
 gi|85722870|gb|ABC77813.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Syntrophus aciditrophicus SB]
          Length = 918

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 88/252 (34%), Gaps = 47/252 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E ++K  L  Y +P     + SSV  A +    +  P+ V+K                
Sbjct: 515 LNEDESKEFLAAYGIPTTVPSLTSSVEEAVTVAGQIGYPV-VIKIV--------SPDISH 565

Query: 63  PADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             D  G V   +S + +      +L        +    G  V    +E   DI  EL L 
Sbjct: 566 KTDVGGVVAGINSDEQLRHAYEGMLKRVRDHAPKALIEGVTVQK-MIE---DIDYELILG 621

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
              D+  G V       GG+          + I    I    G+   +  +L   L    
Sbjct: 622 SKKDKDFGSVILFG--MGGV--------TAELIRDFSI----GLPPLN-RTLAKRLMEAT 666

Query: 178 -------ELQGQARIDGGDLFPNL----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
                    +G+   + G+L   L    Y      +++ ++INPL I   G L  LD++I
Sbjct: 667 KAYKLIQGWRGKPPANLGELETILVYFSYLIVDFPEIAEIDINPLAITG-GVLCALDARI 725

Query: 227 SFDDNALYRHLD 238
             D +  YR  D
Sbjct: 726 ILDKD--YRQSD 735


>gi|229088710|ref|ZP_04220273.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-44]
 gi|228694606|gb|EEL48019.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-44]
          Length = 421

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 35/172 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A + I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVAYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALEAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
                IA               GGM         P+      I+ ++  T+E
Sbjct: 204 VYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQIPESAVSEAIETILHPTAE 255


>gi|212224151|ref|YP_002307387.1| acetyl-CoA synthetase II (NDP forming), beta subunit [Thermococcus
           onnurineus NA1]
 gi|212009108|gb|ACJ16490.1| acetyl-CoA synthetase II (NDP forming), beta subunit [Thermococcus
           onnurineus NA1]
          Length = 241

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 81/230 (35%), Gaps = 23/230 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y +PV +  +  ++  A    + +  P+ +  +  QI             
Sbjct: 22  EYEAKQVLKAYGLPVPEEKLAKTLDEALKYAEEIGYPVAMKLMSPQIL-----------H 70

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+K  +    + + +      I  +     +     + +  V +       RE+ + +
Sbjct: 71  KSDAKVVLLNIKTPEELKEKWEIIHEN----ARKYRPDAEILGVLIAPMLKPGREIIIGV 126

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQG 181
             D   G         GG+ +E +     + +     D    +   +    L      + 
Sbjct: 127 TEDPQFGHAIMFG--LGGIFVEVLKDVTFRLVPITENDARKMIREIKSYPILAGARGEEP 184

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
                  DL   + +   +    + E+  NP+ + + G+   V+D++I  
Sbjct: 185 ADIDAIVDLLLKVSQLVDELREYVKEMDLNPVFVYEQGKGAVVVDARIIL 234


>gi|301052011|ref|YP_003790222.1| phosphoribosylamine--glycine ligase [Bacillus anthracis CI]
 gi|300374180|gb|ADK03084.1| phosphoribosylamine--glycine ligase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 423

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|219852563|ref|YP_002466995.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c]
 gi|219546822|gb|ACL17272.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c]
          Length = 680

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 88/234 (37%), Gaps = 20/234 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +  ALLR+Y+VPV    +++S   A  A   +  P+ V+K                
Sbjct: 6   LSEAEGYALLRQYDVPVPGFQIVTSAKDAGKAATEIGFPV-VMKV--------ISPEIIH 56

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+ G +    S +   +   +I        +     + V  + VE+ A    EL +  
Sbjct: 57  KSDAGGVITGIGSKEQAEAAFAQIHA----GAKAYNPDATVTGIIVEEQAAPGLELIIGG 112

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLELQ 180
             D   G V        G  + E+ KD   +I  +  D +  +  E  A   +       
Sbjct: 113 KTDAAFGKVLTFG---MGGTLVELMKDVTLRILPISEDEIRCMIREIEAYPLISGYRGSH 169

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
            +       +  ++ + F +  ++   +INP  + + G    +D++I  DD  +
Sbjct: 170 PRDEQALVKVITDVARFFGENLNVVEFDINPFRLYETGG-CAVDARIITDDTVV 222


>gi|57640878|ref|YP_183356.1| acetyl-CoA synthetase II (NDP forming), beta subunit [Thermococcus
           kodakarensis KOD1]
 gi|57159202|dbj|BAD85132.1| acetyl-CoA synthetase II (NDP forming), beta subunit [Thermococcus
           kodakarensis KOD1]
          Length = 243

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 83/237 (35%), Gaps = 41/237 (17%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y++PV    +  ++  A    + +  P+ +  +  QI             
Sbjct: 24  EYEAKQVLKAYSLPVPNEKLAKTLDEALEYAEEIGYPVAMKLMSPQIL-----------H 72

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+K  +    S + +     EI  +     +     + +  V +       RE+ + +
Sbjct: 73  KSDAKVVILNIKSPEELKQKWEEIHEN----ARKYRPDAEILGVLIAPMLRPGREIIIGV 128

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS---------- 172
             D   G         GG+ +E +     + I          +T +D             
Sbjct: 129 TEDPQFGHAIMFG--LGGIFVEVLKDVTFRIIP---------ITEKDARKMIAEIKGYPI 177

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKI 226
           L      +        D+   + +   +    + E+  NP+ + + G+   V+D++I
Sbjct: 178 LAGARGEEPADIDAIVDMLLKVSQLVDELRDYIKEMDLNPVFVYEKGKGAVVVDARI 234


>gi|261403430|ref|YP_003247654.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanocaldococcus vulcanius M7]
 gi|261370423|gb|ACX73172.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanocaldococcus vulcanius M7]
          Length = 700

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 38/239 (15%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY-VVKSQIHAGGRGKGRFKELP 63
           EY  K++L+ Y  PV +G ++ S   AE   K L   +  +V  QI              
Sbjct: 486 EYNVKSVLKIYGFPVPEGYLVKSEDEAELYCKKLGKCVMKIVSPQIL-----------HK 534

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-ELYLSL 122
            D+KG +    + +     +  I  +    ++ G    +++ V VE+  +  + E+ +  
Sbjct: 535 TDAKGVIIKPENPREAFRTL--IENAKRYAEEKGIKDLKIDGVLVEEYIEKEKMEIIIGS 592

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D+  G V  +    GG+ +E +            I P   +T +    +   L     
Sbjct: 593 KRDKIFGSVVMVG--LGGVFVEVLKDVS------FGISP---ITRDFAYEMLKSLKSYKV 641

Query: 178 --ELQGQARIDGGDLFPNLYK--AFCD--KDMSLLEINPLIIMKNGRLRVL-DSKISFD 229
              ++G+ R D   +   L K   F D  +++  +++NP+ +  +G    + D+KI  +
Sbjct: 642 LEGVRGRPRKDIEFVVDCLIKIGVFMDIHEEIKEMDLNPVFVFNDGEGGCIGDAKIILE 700



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 25/135 (18%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            IG + N  G  +   D    YG   ANF                     LD+ G A  +
Sbjct: 294 EIGIITNAGGFGVLAADSCVDYGMKLANFEDSTVETLKNILPKTATISNPLDIIGDATPE 353

Query: 307 KVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSA---VKEVKINIPLVMRLEGA 362
           +      +++ D +VKG+L+ +    + +   + K I+      +++K+   +   + G 
Sbjct: 354 RYKKVVDVLSKDKNVKGLLVILTPQEMTKPLEVAKSIIEVKTTHEDLKLKPLITSFVGGV 413

Query: 363 NVDIGNRLIAESGLN 377
           +V      + ++G+ 
Sbjct: 414 SVKGAKSYLRKNGIP 428


>gi|228931790|ref|ZP_04094686.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827770|gb|EEM73508.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 423

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|18976904|ref|NP_578261.1| hypothetical protein PF0532 [Pyrococcus furiosus DSM 3638]
 gi|18892519|gb|AAL80656.1| hypothetical protein PF0532 [Pyrococcus furiosus DSM 3638]
          Length = 457

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 30/159 (18%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  M N  G  + T D I   G   AN                      +D+   A  +
Sbjct: 295 RVAIMTNAGGPGVLTADEIDKRGLKLANLEEKTIEELRSFLPPMAAVKNPVDMIASARGE 354

Query: 307 KVAAAFKIITSDSSVKGILINI-----FGGIMRCDVLVKGILSAVKEVKINIPLVMR-LE 360
                 K++  D +V  ILI I     F G+   +   +GI+ AVKEV    P++   + 
Sbjct: 355 DYYRTAKLLLQDPNVD-ILIAICVVPTFAGMTPTEH-AEGIIRAVKEVNNGKPVLALFMA 412

Query: 361 GANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
           G   +    L+ ++G+       D+  AA  +V   K V
Sbjct: 413 GYVSEKAKELLEKNGIPTYERPEDVAAAAYALVQQAKNV 451


>gi|294876809|ref|XP_002767806.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
 gi|239869666|gb|EER00524.1| succinyl-coa synthetase beta chain, putative [Perkinsus marinus
           ATCC 50983]
          Length = 84

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 13/88 (14%)

Query: 205 LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA 264
           ++EINP   +K+GR+              +R   I     +++       A + +L+YI 
Sbjct: 1   MVEINPRAEIKDGRV-------------TFRQKHIFSQETLAKRIPEMFAAFEWDLNYIG 47

Query: 265 LDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           LDG+IGCMVNGAGLAM     I      
Sbjct: 48  LDGSIGCMVNGAGLAMLKDITISDVKDK 75


>gi|330998790|ref|ZP_08322518.1| acetyl coenzyme A synthetase, alpha domain protein [Parasutterella
           excrementihominis YIT 11859]
 gi|329576287|gb|EGG57803.1| acetyl coenzyme A synthetase, alpha domain protein [Parasutterella
           excrementihominis YIT 11859]
          Length = 711

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 72/228 (31%), Gaps = 22/228 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++  +L  Y V V +         A +    +  P+ +               K      
Sbjct: 490 ESLQVLAAYGVRVCRDGEAKDADEAVALANKIGYPVVM----------KLNSKKISHKTD 539

Query: 67  KGGVRV-ESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GGVRV       + ++  +++   T      G  G     V +++     RE+      
Sbjct: 540 VGGVRVGIKDADQLRAEFADLVNKLTEKGLMDGFEG-----VIIQEMVKSDREMVCGCAK 594

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQGQA 183
           D   G +       GG+ +E +     +     + D    + S      L          
Sbjct: 595 DPQYGQMMMFG--LGGVFVEVMKDVTFRLAPLTVEDASDMIHSVKAYKLLAGARGAVPAQ 652

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIM-KNGRLRVLDSKISFD 229
                +    L +   D      L+INPL+I  K+G    +D +I F+
Sbjct: 653 INKVEETLLRLSQLVEDFAFIDELDINPLMISGKDGEPIAVDGRIKFN 700


>gi|229194673|ref|ZP_04321466.1| Phosphoribosylamine--glycine ligase [Bacillus cereus m1293]
 gi|228588776|gb|EEK46801.1| Phosphoribosylamine--glycine ligase [Bacillus cereus m1293]
          Length = 423

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVKYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|217957858|ref|YP_002336402.1| phosphoribosylamine--glycine ligase [Bacillus cereus AH187]
 gi|229137124|ref|ZP_04265743.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-ST26]
 gi|217064633|gb|ACJ78883.1| phosphoribosylamine--glycine ligase [Bacillus cereus AH187]
 gi|228646296|gb|EEL02511.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-ST26]
          Length = 423

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTN 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|324324299|gb|ADY19559.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 423

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVKYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|124266204|ref|YP_001020208.1| acyl-CoA synthetase [Methylibium petroleiphilum PM1]
 gi|124258979|gb|ABM93973.1| acyl-CoA synthetase (ADP forming) [Methylibium petroleiphilum PM1]
          Length = 918

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 93/235 (39%), Gaps = 28/235 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV   ++  S + A      L  P+  +K    +    K   + +
Sbjct: 503 LTEMESKTLLSSFHIPVTNTILARSANEAMMIATQLGFPV-ALKID-SSDISHKSDVEGV 560

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
             +   G     +   ++  +  +             G+R+N V V+  A     RE+Y+
Sbjct: 561 ALNIMNGASARDTYTDMVERVARL-----------QPGARINGVTVQKMARARRGREIYI 609

Query: 121 SLLVDRTSGMVAFIASTQGGM--DIEEVAKDYP---QKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G    +    G M   I + A + P   + + + LI+      S    +L +
Sbjct: 610 GLVTDDPFG-PVIVFGAGGTMIELINDRAMELPPLNRFLARRLIE-----RSRVAETLGE 663

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                         +   + +  C+   +  ++INP+I+ ++G +  +D++I  D
Sbjct: 664 WRGASAVNLDALEQVLLRVSEMVCELPQLREMDINPIIVDESGAV-AVDARIVID 717


>gi|17228264|ref|NP_484812.1| acetyl-CoA synthetase [Nostoc sp. PCC 7120]
 gi|17130114|dbj|BAB72726.1| acetyl-CoA synthetase [Nostoc sp. PCC 7120]
          Length = 916

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 83/237 (35%), Gaps = 27/237 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY++K +L  Y +P+    V  +   A    +++  P+ VVK   H            
Sbjct: 510 LTEYESKQILAAYGIPIVATCVAKTEDEAIKCAESIGYPV-VVKLYSHT---------IT 559

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGV++       +     ++  ++  K        V    ++        EL + 
Sbjct: 560 HKTDVGGVQLNLPDADAVRRAYRMIAESVEQKAGSEHFLGVT---IQPMVKTDGYELIIG 616

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
             +D   G V    +  GG  +E         I    ++  +     +   +   L  ++
Sbjct: 617 SSLDPQFGPVLLFGA--GGQLVEVFQDG---AIALPPLNSTLARRMMEHTKIYKALKGVR 671

Query: 181 GQARIDG---GDLFPNLYKAFCDKD-MSLLEINPLIIMKNGR---LRVLDSKISFDD 230
           G+  +D      L     +   ++  +  ++INPL+    G    L  LD+++   +
Sbjct: 672 GRQSVDMEGLEQLLVAFSQLVVEQHWIKEIDINPLLASPMGENSSLIALDARVVLHE 728


>gi|218901489|ref|YP_002449323.1| phosphoribosylamine--glycine ligase [Bacillus cereus AH820]
 gi|228925544|ref|ZP_04088633.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|218535218|gb|ACK87616.1| phosphoribosylamine--glycine ligase [Bacillus cereus AH820]
 gi|228834022|gb|EEM79570.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 423

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAAKEML-------QDVKFGEASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|52144945|ref|YP_081883.1| phosphoribosylamine--glycine ligase [Bacillus cereus E33L]
 gi|51978414|gb|AAU19964.1| phosphoribosylamine--glycine ligase [Bacillus cereus E33L]
          Length = 423

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVKYIEKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|269836565|ref|YP_003318793.1| CoA-binding domain-containing protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785828|gb|ACZ37971.1| CoA-binding domain protein [Sphaerobacter thermophilus DSM 20745]
          Length = 743

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 28/239 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIH-AGGRGKGRFKELP 63
           E +AKA+L +Y +PV + V+ ++   A  A + +  P+ V+K +      + +     L 
Sbjct: 524 EREAKAILARYGIPVTREVLATTPDEAVVAAEAIGYPV-VLKVESPDILHKTEAGGVLLG 582

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELYLSL 122
                 VR   +  +  +                   + +  V V++       EL L +
Sbjct: 583 LQDADAVREGFARVTAGARA-------------YAPWAEIRGVLVQEMVPAGGHELILGM 629

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D   G    +    GG+ +E +             D    ++    A +      +GQ
Sbjct: 630 TQDAAFGPAVAVG--LGGVFVETLKDVALAVPPISNRDAHAMLSRLRAAPILTGHGARGQ 687

Query: 183 ARID---GGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
              D     D+         D   D++ ++INPL+    G+     +++  D   + R 
Sbjct: 688 GAADLDAVADILVRFSSLCRDLRDDVAEIDINPLVAFGPGK----GARV-VDCLIVPRQ 741


>gi|126665857|ref|ZP_01736838.1| putative acyl-coa synthetase protein [Marinobacter sp. ELB17]
 gi|126629791|gb|EBA00408.1| putative acyl-coa synthetase protein [Marinobacter sp. ELB17]
          Length = 699

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 35/228 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L    + + +  ++SS     +A + L  P+ V           K        D  
Sbjct: 480 AKEALAACGLSIPRFRIVSSTADGVAAAEELGYPVVV-----------KALGVAHKTDVG 528

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLLVDR 126
           G          V + +  +L                  V +E      + EL + +  D 
Sbjct: 529 GVRLNLVQPGEVAAAVSHMLTMG-------------RDVLIEKMVSGSVAELIVGVSRDD 575

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             G+   + +  GG+ +E +   +P  +     +    + S   + L      +G++  D
Sbjct: 576 QFGLHLVVGA--GGILVELLKDSHPLLLPTNRTEVEKALRSLQTSRLLF--GFRGRSEGD 631

Query: 187 GGDLFPNL--YKAFCDKD---MSLLEINPLIIMKNGR-LRVLDSKISF 228
              +   +    A+ +     +  L++NPL++M  G      D+ I F
Sbjct: 632 LEAVIDAVLAIAAYAENHTDSLIELDVNPLMVMPEGHGAMAADALIRF 679


>gi|41352965|gb|AAS01104.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T     KG
Sbjct: 1   WTMVAGGGASVVYSDTVADLGYVKELANYGEYSGNPSRAETREYVKTVFDLMTRSKHPKG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A++E      +I I + +R  G N 
Sbjct: 61  HKILIIGGAIANFTDVAKTFDGIIDAMREYADKLREIGIRIYVRRGGPNY 110


>gi|55377722|ref|YP_135572.1| succinyl-CoA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55230447|gb|AAV45866.1| succinyl-Coa synthetase [Haloarcula marismortui ATCC 43049]
          Length = 701

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 82/225 (36%), Gaps = 17/225 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P  +G V+SS   AE+  + +     V+K               L    
Sbjct: 488 EAMELLDAYGIPTPQGDVVSSPVEAEAVAEEIG-DDVVMKIV---------SPDILHKSD 537

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV V   ++ V     ++    ++  +     + +  V V++  D+   +   L ++R
Sbjct: 538 IGGVEVAVPVEEVRDTYEDL----VVRARNYQEDATILGVQVQEMVDLDNGVETILGMNR 593

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  +    GG+ +E +  +          +    +   D A L             
Sbjct: 594 DPQFGPLLLFGLGGIFVEVLEDNTVSVAPVSETEAKGMLDDIDSAPLLRGARGRDPVDEA 653

Query: 186 DGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFD 229
              +    L +   D    + L+INPL+   +G ++ +D +++ D
Sbjct: 654 TLVETIQRLSQLVTDFPAIVELDINPLVATPDG-VQAVDLRLTLD 697


>gi|229159440|ref|ZP_04287458.1| Phosphoribosylamine--glycine ligase [Bacillus cereus R309803]
 gi|228624011|gb|EEK80819.1| Phosphoribosylamine--glycine ligase [Bacillus cereus R309803]
          Length = 423

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASQKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|163938290|ref|YP_001643174.1| phosphoribosylamine--glycine ligase [Bacillus weihenstephanensis
           KBAB4]
 gi|163860487|gb|ABY41546.1| phosphoribosylamine--glycine ligase [Bacillus weihenstephanensis
           KBAB4]
          Length = 423

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|303257788|ref|ZP_07343798.1| acetyltransferase, GNAT family [Burkholderiales bacterium 1_1_47]
 gi|302859391|gb|EFL82472.1| acetyltransferase, GNAT family [Burkholderiales bacterium 1_1_47]
          Length = 711

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 72/228 (31%), Gaps = 22/228 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++  +L  Y V V +         A +    +  P+ +               K      
Sbjct: 490 ESLQVLAAYGVRVCRDGEAKDADEAVALANKIGYPVVM----------KLNSKKISHKTD 539

Query: 67  KGGVRV-ESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GGVRV       + ++  +++   T      G  G     V +++     RE+      
Sbjct: 540 VGGVRVGIKDADQLRAEFTDLVNKLTEKGLMDGFEG-----VIIQEMVKSDREMVCGCAK 594

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQGQA 183
           D   G +       GG+ +E +     +     + D    + S      L          
Sbjct: 595 DPQYGQMMMFG--LGGVFVEVMKDVTFRLAPLTVEDASDMIHSVKAYKLLAGARGAVPAQ 652

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIM-KNGRLRVLDSKISFD 229
                +    L +   D      L+INPL+I  K+G    +D +I F+
Sbjct: 653 INKVEETLLRLSQLVEDFAFIDELDINPLMISGKDGEPIAVDGRIKFN 700


>gi|256068577|ref|XP_002570852.1| succinyl-CoA synthetase beta chain [Schistosoma mansoni]
 gi|238651622|emb|CAZ38537.1| succinyl-CoA synthetase beta chain, putative [Schistosoma mansoni]
          Length = 84

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 46  KSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC 105
           K+QI AGGRG G F++     KGGV +      +   + ++LG+ LITKQT  +G  V+ 
Sbjct: 13  KAQIPAGGRGMGVFRD---GFKGGVHLTKDPDEMALIVSKMLGNHLITKQTTSSGILVSQ 69

Query: 106 V 106
           V
Sbjct: 70  V 70


>gi|149174218|ref|ZP_01852845.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Planctomyces maris DSM 8797]
 gi|148846763|gb|EDL61099.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Planctomyces maris DSM 8797]
          Length = 899

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 76/239 (31%), Gaps = 36/239 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E  +K LL  Y +PV + VV  S   A    + +  P+   V   QI           
Sbjct: 491 LSECTSKTLLEAYGIPVNRTVVARSAEEAVQLSQQMGRPVVLKVYSEQI----------- 539

Query: 61  ELPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILREL 118
                  GGV ++    + +      I+     ++      G  V    V +      EL
Sbjct: 540 -THKTDVGGVELDLFDDREISEAYARIMQRVKESRPDADVEGVTVQR-MVSE--PEGHEL 595

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS------ 172
            L +  D   GMV  + +  GG   E            L + PL    +           
Sbjct: 596 ILGVKRDPVFGMVLLVGA--GGTSAELYQDRA------LELPPLNERLARHALESLRSWP 647

Query: 173 -LCDMLELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
            L               ++   L Y       +  L+INPL++     +  LD++I  D
Sbjct: 648 LLNGYRGRPPVNLDQLIEVLIRLSYFVADFPQIVELDINPLMVTPRNSV-ALDARIVVD 705



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 18/169 (10%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGA------GLAMATMDIIKL 288
           R  ++ +L D +E  +R    +   L+ +   G  G M   A       LA  + + I+ 
Sbjct: 279 RVFELDDLFDCAELLARHRPPRGERLAILTNAGGPGVMCTDALLERKGVLASLSEETIEQ 338

Query: 289 YG--GAPA----NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL--VK 340
                 PA    N LD+ G A  ++   A +II  DS V G+L+ +       D      
Sbjct: 339 LNRVLPPAWSHGNPLDILGDALPERFGKALEIILVDSQVDGVLV-VLSPQAMTDPTGAAD 397

Query: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
            ++ A K +     L   + G  V  G   +  +G+   T    + A +
Sbjct: 398 AVIKAAK-LTSKPILTSWMGGGKVLEGITRLTAAGIP--TYNTPEQAVR 443


>gi|18978159|ref|NP_579516.1| acetyl-CoA synthetase [Pyrococcus furiosus DSM 3638]
 gi|5419968|emb|CAB46517.1| acetyl-CoA synthetase [Pyrococcus furiosus]
 gi|18893964|gb|AAL81911.1| acetyl-CoA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 232

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 78/226 (34%), Gaps = 22/226 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +L+ Y +PV +  V  +   A      +  P+   +V  QI            +  
Sbjct: 25  EAKEILKLYGIPVPEFKVARNEEEAVKFSGEIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV++         + RE   + +   +     + +  V +     + RE+ + ++ 
Sbjct: 73  SDAGGVKINIKNDE---EAREAFRTIMQNARNYKPDADLWGVIIYRMLPLGREVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQA 183
           D   G         GG+ +E +     +       D L  +       +       +   
Sbjct: 130 DPQFGPAVMFG--LGGIFVEILKDVSFRVAPITKEDALEMIREIKAYPILAGARGEKPVN 187

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                D+   + +   +  ++  ++INP+   ++     +D+++  
Sbjct: 188 IEALADIIVKVGELALELPEIKEIDINPIFAYED-SAIAVDARMIL 232


>gi|229068042|ref|ZP_04201350.1| Phosphoribosylamine--glycine ligase [Bacillus cereus F65185]
 gi|228715050|gb|EEL66917.1| Phosphoribosylamine--glycine ligase [Bacillus cereus F65185]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMIIA 210


>gi|229077644|ref|ZP_04210274.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock4-2]
 gi|228705585|gb|EEL57941.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock4-2]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMIIA 210


>gi|284161406|ref|YP_003400029.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Archaeoglobus profundus DSM 5631]
 gi|284011403|gb|ADB57356.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Archaeoglobus profundus DSM 5631]
          Length = 663

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 22/221 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            ++R+Y +PV    +  S   A      +  P+ +               K +     G 
Sbjct: 463 EVVREYGIPVPPYGIARSAEEALEIADKIGYPVAM----------KVVSPKIIHKTDVGC 512

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V++  +   V+    EIL       +       V  V ++      +E+ + +  D + G
Sbjct: 513 VKLNVTRNEVVKIFYEIL-------KRAEEFGDVEGVMIQKMMPTGKEVIVGMKRDPSFG 565

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGG 188
            +       GG+ ++       +       D    V       +   +   +        
Sbjct: 566 PLVMFG--MGGIYVDVFRDVSFRIAPISREDAEEMVREVKAYRILQGVRGEKPSDVDAII 623

Query: 189 DLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISF 228
           D+   + +   D +  L L+INP+ + + G    +D K+  
Sbjct: 624 DVILRVSQMVMDLEEILELDINPIFVYEKG-CCAVDVKVIV 663



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 70/191 (36%), Gaps = 38/191 (19%)

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIA-LDGNIGCMVNGAGLAMATMDIIKL 288
               +R   + E   V E            LSYI    G +  + N  G A+   D ++ 
Sbjct: 256 CRTAFRQSGVVEAESVEELFDFSTV-----LSYIKGFRGGVAIVTNSGGPAVMASDAVEK 310

Query: 289 YGGAPANF--------------------LDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           Y    A+F                    +DV G AD ++   A  I+  D +V  IL   
Sbjct: 311 YNLNLASFEHETVEMLRSIAPYGNVYNPVDVLGDADAERFCKALDIVAKDRNVGLILA-- 368

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMR-LEGANVDIGNRLIAESGLNVITAIDLDDA 387
              I+     + G+  A K V IN  +V   + G + +   R++ E G+      + +D 
Sbjct: 369 ---ILTPTATIDGVKVAEKIVGINKKVVGCFMGGKSFEEAVRILREKGI-----ANFNDP 420

Query: 388 AQKIVHAVKGV 398
             + V A+  V
Sbjct: 421 V-RAVKAIASV 430


>gi|228950841|ref|ZP_04112964.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228808770|gb|EEM55266.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMIIA 210


>gi|229113956|ref|ZP_04243382.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock1-3]
 gi|228669415|gb|EEL24831.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock1-3]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ VVK+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYDEAVKYIQKVGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGVASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|229131287|ref|ZP_04260189.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-ST196]
 gi|228652173|gb|EEL08108.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-ST196]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|229095003|ref|ZP_04225999.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-29]
 gi|228688333|gb|EEL42215.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-29]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ VVK+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYDEAVKYIQKVGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGVASKKVVIEEFLD-GQEFSLMAFVNGTN 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|315230532|ref|YP_004070968.1| acetyl-CoA synthetase subunit beta [Thermococcus barophilus MP]
 gi|315183560|gb|ADT83745.1| acetyl-CoA synthetase (ADP-forming) beta chain [Thermococcus
           barophilus MP]
          Length = 232

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 79/224 (35%), Gaps = 22/224 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +L+ Y +P     V  +   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILKLYGIPTPDFKVARNEEEAVKFAREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV++         + RE   + +   +     + +  V +     + +E+ + ++ 
Sbjct: 73  SDAGGVKINIKNDD---EAREAFRTIMENAKRYKPDADLWGVIIYKMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK-LLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G           ++I +        I K   ++ +  + +  +  L      +   
Sbjct: 130 DPQFGPAVMFGLGGIFVEILKDVSFRVAPITKEEALEMIKEIKAYPI--LAGARGEKPVN 187

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                D+   + +   +  ++  L+INP+   ++     +D+++
Sbjct: 188 IEALADIIVKVGELALELPEVKELDINPIFAYED-EAVAVDARM 230


>gi|229188556|ref|ZP_04315595.1| Phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 10876]
 gi|228594745|gb|EEK52525.1| Phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 10876]
          Length = 423

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMIIA 210


>gi|92113241|ref|YP_573169.1| cyanophycin synthetase [Chromohalobacter salexigens DSM 3043]
 gi|91796331|gb|ABE58470.1| Cyanophycin synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 879

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           K +L +  +PV +G V  S+  A    + +  P+ VVK  I   GRG     E
Sbjct: 220 KRILEEAGIPVPRGYVCHSLDEASETAREVGYPV-VVKPLIGNHGRGVSTDVE 271


>gi|297527187|ref|YP_003669211.1| ATP-grasp domain protein [Staphylothermus hellenicus DSM 12710]
 gi|297256103|gb|ADI32312.1| ATP-grasp domain protein [Staphylothermus hellenicus DSM 12710]
          Length = 231

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 82/229 (35%), Gaps = 18/229 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A  +++ YN+   +  +  S+  A    + +  P  V+K               
Sbjct: 17  KLLEHEAFEIIKAYNISAPETAIARSLDEAVEYAEKIGYP-LVLKIV--------SPDIS 67

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +D  G +    S + +I    +I  +          G+R+  V ++  A    E+ + 
Sbjct: 68  HKSDVGGVILNIKSKEELIEAYNKIYENV----SKNAPGARIVGVLIQKMAPKGLEVIIG 123

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
            L D   G V       GG+ +E +     +       D    +     A L +      
Sbjct: 124 GLRDNIFGPVVMFG--LGGIFVEVLRDVSFRIAPLTEEDAFEMMNEIKAAKLLEGYRGQP 181

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              +     +  ++ K   +  ++  +++NP++   +  + V D++I  
Sbjct: 182 PVDKKSLAKIILSVSKLLEENPEIESIDLNPVMAYPDNAVVV-DARIIL 229


>gi|29830371|ref|NP_825005.1| pimeloyl-CoA synthetase [Streptomyces avermitilis MA-4680]
 gi|29607482|dbj|BAC71540.1| putative pimeloyl-CoA synthetase [Streptomyces avermitilis MA-4680]
          Length = 713

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 83/235 (35%), Gaps = 39/235 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+ +  S      + +    ++
Sbjct: 500 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAASQVGYPVVMKASGAQIAHKTELGLVKI 559

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       S   V    RE+      T      G  ++ V V    +   EL + +
Sbjct: 560 GLT---------SASQVRDAYREL------TDIARYEGISLDGVLVCQMVERGVELVVGV 604

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D+  G    +    GG+ +E +          + + P      +   ++   L     
Sbjct: 605 THDQLFGPTVTVG--LGGVLVEVLRDVA------VRVPPFG---EDQARAMLGELRGRAL 653

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                           ++   + +   +   D++ L+INPL+++  G+    LD+
Sbjct: 654 LDGVRGGPPVDVDALVEVVIRVQRMALELGDDLAELDINPLMVLPRGQGAVALDA 708


>gi|261856448|ref|YP_003263731.1| CoA-binding protein [Halothiobacillus neapolitanus c2]
 gi|261836917|gb|ACX96684.1| CoA-binding domain protein [Halothiobacillus neapolitanus c2]
          Length = 900

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 85/232 (36%), Gaps = 32/232 (13%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KA+L  +++P  + ++      A  A ++L  P+  +K                    
Sbjct: 501 ESKAILNAFHIPTTQTILARDADEAMLAAESLGFPV-ALKISAPTL---------THKTD 550

Query: 67  KGGVRV-ESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GGVR+   S+++     +E+L        +    G  V     E      REL L +  
Sbjct: 551 VGGVRLNVRSVQTTRQQAQEMLDRVRAQHPEAQIEGITVER-MAE--VGHARELLLGVTR 607

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-------TSEDVASLCDML 177
           D   G    IA   GG+ +E +          L + PL G+        +     L    
Sbjct: 608 DPVFG--PVIAFGMGGIAVEVLRDRA------LALPPLNGLLIDRLIAQTHAARMLGPFR 659

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     R     +   + +  C+  +++ ++INPL+      +  +D++I  
Sbjct: 660 DEPAVDRKSLDQILMRVSELVCELPEVAGIDINPLLA-GEFSVVAVDARIEL 710


>gi|56478657|ref|YP_160246.1| organic acid-CoA ligase (ADP forming) feruloyl-CoA synthetase
           [Aromatoleum aromaticum EbN1]
 gi|56314700|emb|CAI09345.1| Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA
           synthetase [Aromatoleum aromaticum EbN1]
          Length = 716

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 74/226 (32%), Gaps = 26/226 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQ K  L    + +  G +   V  A      +  P+ V+K+Q  A             
Sbjct: 495 EYQGKQWLAAAGMTIPAGRLAGDVDEATRIAAEIGYPV-VIKAQADAL---------PHK 544

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV V    ++ +    E L + L   +       ++ V VE  A+   EL +    
Sbjct: 545 SDVGGVIVALVDEAALRRGWEQLHTNLAQAR---PDLVLDGVLVETMAEKGLELVVGARR 601

Query: 125 DRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           D        +    G       D+  +  D  +      +  L G      A L  +   
Sbjct: 602 D-PDWGPVVMVGLGGVWIEALKDVRLLPPDLGEAQIVEELHHLKG-----AALLRGLRGS 655

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDS 224
                         +        +++ ++INPL+   + R+ VLD+
Sbjct: 656 PAVDVRKVAAAVAVVGALMRTNPEVTEIDINPLVAYPD-RVVVLDA 700


>gi|311109846|ref|YP_003982697.1| ATP-grasp domain-containing protein 4 [Achromobacter xylosoxidans
           A8]
 gi|310764535|gb|ADP19982.1| ATP-grasp domain protein 4 [Achromobacter xylosoxidans A8]
          Length = 707

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 20/224 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY+ K  L ++ VPV    V +S   AE+  + + G   +                    
Sbjct: 490 EYEVKQWLAQFGVPVGAAEVAASPEQAEAIARRMGGLSAM----------KILSPDVAHK 539

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGVR+    +   +  R I  +             +  + V+     + EL + +  
Sbjct: 540 TEVGGVRLNIRPEDAQAAARGIEEAARAAAPQAE----LRGLLVQPMESGVGELIVGVTR 595

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIF---KLLIDPLIGVTSEDVASLCDMLELQG 181
           D   G+   +    GG+  E       + +     + +D L  +    +           
Sbjct: 596 DPVFGLAMTVG--LGGIMTEIFQDVAHRLLPVDETIALDMLQELRGAALLQGFRGRPKAD 653

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
                      +     C   ++ +EINPL+I   G+    LD+
Sbjct: 654 VQAAARAIAAVSRAALACGPGLTDIEINPLLIKAEGQGAVALDA 697


>gi|229171132|ref|ZP_04298726.1| Phosphoribosylamine--glycine ligase [Bacillus cereus MM3]
 gi|228612310|gb|EEK69538.1| Phosphoribosylamine--glycine ligase [Bacillus cereus MM3]
          Length = 423

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|226939292|ref|YP_002794363.1| acetyl-CoA synthetase [Laribacter hongkongensis HLHK9]
 gi|226714216|gb|ACO73354.1| Probable acetyl-CoA synthetase [Laribacter hongkongensis HLHK9]
          Length = 897

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 93/244 (38%), Gaps = 26/244 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +N+PV +  +  +   A +  +    P+ V+K               +
Sbjct: 489 LSELESKALLAAFNLPVNQVRLARTSAEAVAYAEEFGYPV-VLKID---------SPDVI 538

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
                GGV +    ++    +R +  + L   +     +R+N + V+        REL +
Sbjct: 539 YKSDVGGVELNLRTEAA---VRAMFEAILERTRQHRPDARINGILVQPMTRPRYGRELMV 595

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSED--VASLCDML 177
            +  D  S          GG+ +E +       I    + D L     E   V ++    
Sbjct: 596 GVTHD-DSFGPVMTF-GMGGIAVEVLNDTS---IALPPLNDYLAERMIEQTRVRTILGAF 650

Query: 178 ELQGQARIDGG-DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           +     R+D    +   + +  C   ++  ++INPLI  +NG +  LD+++   +    R
Sbjct: 651 KNMPPVRLDAIRQVLLRVSEMVCALPELWEMDINPLIADENG-VVALDARVVIREAGSER 709

Query: 236 HLDI 239
               
Sbjct: 710 RFGH 713


>gi|39937300|ref|NP_949576.1| GCN5-like N-acetyltransferase [Rhodopseudomonas palustris CGA009]
 gi|192293080|ref|YP_001993685.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris TIE-1]
 gi|39651158|emb|CAE29681.1| GCN5-related N-acetyltransferase:CoA Binding Domain
           [Rhodopseudomonas palustris CGA009]
 gi|192286829|gb|ACF03210.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris TIE-1]
          Length = 907

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 125/402 (31%), Gaps = 76/402 (18%)

Query: 41  PLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           P  V K    AG  G      + ++   G     S     +      G  LI       G
Sbjct: 79  PRSVAKVVAEAGELGVAGAIIISSEMGRGK---GSYAEAANRAARKSGIRLI-------G 128

Query: 101 SRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI------ 154
                + +  G ++      S            + S  G +    V     ++I      
Sbjct: 129 PNCLGIMI-PGVNLNA----SFAAHMPRRGNLALISQSGAIAAGMVDWAAVKEIGFSGIV 183

Query: 155 ---FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL 211
               +L +D    +           + L  +A  D          A          + P+
Sbjct: 184 SIGDQLDVDIADMLDFYAADLDTRAILLYIEAVTDARKFMSAARAAAR--------VKPV 235

Query: 212 IIMKNGRLRVLDSKI---------SFD--DNALYRHLDIQELRDVSEEDSREIEAKQHNL 260
           +++K+GR     +K            D    A +R   +  + D+ E       A+    
Sbjct: 236 VVVKSGR-MAHGAKAAATHTGAFAGADAVYEAAFRRAGMLRVYDLRELFDC---AETLGR 291

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDV 299
                   +  + NG G+ +  +D +   GG PA                     N +D+
Sbjct: 292 VSAPRGKRVAILTNGGGIGILAVDRLVELGGEPATLSADLHKKLDAILPTSWSGFNPIDI 351

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKIN----IP 354
            G AD ++ +A   ++ +D     IL+ N+   +     + + ++  V E ++      P
Sbjct: 352 TGDADAERYSATLSMLLADPDNDAILVMNVQTAVASPRDIAREVIRVVGEERVRRTLFKP 411

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +     GA   + +   A S +      D  DA + I++ V+
Sbjct: 412 VFAVWVGAEEAVTHAFDAAS-IPNYPTED--DAVRSIMNMVR 450



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 21/224 (9%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           L   Y +P+   +  ++   A S   +    G   VVK           R     +D  G
Sbjct: 499 LFAAYQIPMIPTLAATNAEEAVSWASSFLSQGVTVVVKV--------LSRDIPHKSDIGG 550

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDR 126
            V   +S+++V   + EI+      +       R+  V V+        REL + +  D 
Sbjct: 551 VVLNLTSVEAVRVAVNEIMARAAKLRPNA----RLEGVMVQPMILRPKARELTIGI-ADD 605

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQGQARI 185
            +     IA  QGG  +E +           L      +    V+  LC   ++    R 
Sbjct: 606 PTFGPV-IAFGQGGTGVELIDDRSLALPPLDLPLAESLIARTRVSKLLCAYRDVPEVKRS 664

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                   L +   D  ++  L++NPL+  ++G +  +D+++  
Sbjct: 665 AVALTLVKLSQMAADLPEIRELDVNPLLADESG-VVAIDARVVV 707


>gi|316935761|ref|YP_004110743.1| GCN5-like N-acetyltransferase [Rhodopseudomonas palustris DX-1]
 gi|315603475|gb|ADU46010.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris DX-1]
          Length = 907

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/402 (16%), Positives = 126/402 (31%), Gaps = 76/402 (18%)

Query: 41  PLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           P  V K    AG  G      + ++   G     S     +      G  LI       G
Sbjct: 79  PRSVAKVVAEAGELGVAGAIIISSEMGRGK---GSYAEAANRAARKSGIRLI-------G 128

Query: 101 SRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI------ 154
                + +  GA++      S            + S  G +    V     ++I      
Sbjct: 129 PNCLGIMI-PGANLNA----SFAAHMPRRGNLALISQSGAIAAGMVDWAAVKEIGFSGIV 183

Query: 155 ---FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL 211
               +L +D    +           + L  +A  D          A          + P+
Sbjct: 184 SIGDQLDVDIADMLDFYAADLETRAILLYIEAVTDARKFMSAARAAAR--------VKPV 235

Query: 212 IIMKNGRLRVLDSKI---------SFD--DNALYRHLDIQELRDVSEEDSREIEAKQHNL 260
           +++K+GR     +K            D    A +R   +  + D+ E       A+    
Sbjct: 236 VVVKSGR-MAHGAKAAATHTGAFAGADAVYEAAFRRAGMLRVYDLRELFDC---AETLGR 291

Query: 261 SYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDV 299
                   +  + NG G+ +  +D +   GG PA                     N +D+
Sbjct: 292 VSAPRGKRVAILTNGGGIGILAVDRLVELGGEPATLSADLHKKLDAILPTSWSGFNPIDI 351

Query: 300 GGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKIN----IP 354
            G AD ++ +A   ++ +D     +L+ N+   +     + + ++  V E ++      P
Sbjct: 352 TGDADAERYSATLSMLLADPDNDAVLVMNVQTAVASPRDIAREVIRVVGEERVRRTLFKP 411

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +     GA   + +   A S +      D  DA + I++ V+
Sbjct: 412 VFAVWVGAEEAVTHAFDAAS-IPNYPTED--DAVRSIMNMVR 450



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 84/227 (37%), Gaps = 27/227 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           L   Y +P+   +  ++   A S   +    G   VVK           R     +D  G
Sbjct: 499 LFAAYQIPMIPTLAATNAEEAVSWASSFLSQGVTVVVKV--------LSRDIPHKSDIGG 550

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDR 126
            V   +S+++V   + EIL      +       R++ V V+        REL + +  D 
Sbjct: 551 VVLNLTSVEAVRVAVDEILARAARLRPDA----RLDGVMVQPMILRPKARELTIGIADDP 606

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE----LQGQ 182
           T G V        G+++ +        +   L + LIG T      +  +L     +   
Sbjct: 607 TFGPVIAFGQGGTGVELIDDRSLALPPLDLPLAESLIGRT-----RVSKLLGAYRDVPEV 661

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            R         L +   D  ++  L++NPL+  +NG +  +D+++  
Sbjct: 662 KRSAVALTLVKLSQMAADLPEIRELDVNPLLADENG-VVAIDARVVV 707


>gi|281354479|gb|EFB30063.1| hypothetical protein PANDA_017939 [Ailuropoda melanoleuca]
          Length = 45

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           P    L G NV     ++  SGL + +A+DL+DAA+K V  V
Sbjct: 1   PCTPHLLGTNVHEAQNILNNSGLPITSAVDLEDAAKKSVACV 42


>gi|34592287|gb|AAQ76340.1| ATP citrate lyase beta [Persephonella marina]
          Length = 110

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T     KG
Sbjct: 1   WTMVAGGGASVVYADTVADLGYVKELANYGEYSGNPSRAETREYVKTVFDLMTRSKHPKG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+KE      +I + + +R  G N 
Sbjct: 61  HRILIIGGAIANFTDVAKTFDGIIDAMKEYADKLREIGVRIYVRRGGPNY 110


>gi|229154052|ref|ZP_04282177.1| Phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 4342]
 gi|228629332|gb|EEK86034.1| Phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 4342]
          Length = 423

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYYTFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+  +
Sbjct: 152 GVTVAMTLEEALQATKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGKT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|218233779|ref|YP_002365128.1| phosphoribosylamine--glycine ligase [Bacillus cereus B4264]
 gi|218161736|gb|ACK61728.1| phosphoribosylamine--glycine ligase [Bacillus cereus B4264]
          Length = 423

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  SL+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMSLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|219852506|ref|YP_002466938.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c]
 gi|219546765|gb|ACL17215.1| CoA-binding domain protein [Methanosphaerula palustris E1-9c]
          Length = 676

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 82/244 (33%), Gaps = 22/244 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +  ALL +  VPV +   ++S   AE A + +  P+   VV +++    +       +  
Sbjct: 9   EGYALLSRVGVPVPQHRRVTSTPEAEDAAEAIGFPVVLKVVSAEVV--HKTDAGGVVMNL 66

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +  VR+     S                     G+ +    VE+      EL++    
Sbjct: 67  SDRAAVRIAYQQISTQVAAA-------------IPGAVIEGFLVEEQVRPGLELFIGGRT 113

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D + G V       GG+ +E +     + +     D    +       L           
Sbjct: 114 DPSFGKVITFG--LGGVLVELIHDVTIRVLPVDRDDVSSMIRGIKGYPLIRGFRSSPPLD 171

Query: 185 ID-GGDLFPNLYKAF-CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
                DL   +   F  +  ++  +INPL + ++ +   +D++   D   +Y       L
Sbjct: 172 EALLVDLILAITTWFGSEPTITEFDINPLRLYRD-QAVAVDARFYEDPEGIYPACSEHAL 230

Query: 243 RDVS 246
            D S
Sbjct: 231 VDPS 234


>gi|260892228|ref|YP_003238325.1| phosphoribosylamine/glycine ligase [Ammonifex degensii KC4]
 gi|260864369|gb|ACX51475.1| phosphoribosylamine/glycine ligase [Ammonifex degensii KC4]
          Length = 426

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++Y +P A+  + +S   A++ +++L  P  VVK+   A G+             
Sbjct: 106 AKKLMQRYGIPTARAAIFTSPEEAKAYVRSLETPC-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++++     I ++    ++ +  G  G     V +E+  +   E  +  L D  
Sbjct: 152 -GVVVAATVEEAEKAIEDM----MVRRVFGTAG---ERVLIEEKLE-GEEASVIALTDGK 202

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 203 TVLPLLPA 210


>gi|229055126|ref|ZP_04195554.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH603]
 gi|228721202|gb|EEL72731.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH603]
          Length = 423

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|254167991|ref|ZP_04874839.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Aciduliprofundum boonei T469]
 gi|289595997|ref|YP_003482693.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Aciduliprofundum boonei T469]
 gi|197623034|gb|EDY35601.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Aciduliprofundum boonei T469]
 gi|289533784|gb|ADD08131.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Aciduliprofundum boonei T469]
          Length = 711

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 25/232 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK +   Y +P+ KG +  +   A    + +  P+ +                 +
Sbjct: 482 LTEPEAKEVFAAYGLPIPKGKMARNPEEAVKIARAVEYPVVM----------KIVSPNIV 531

Query: 63  PADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                GGV+V   +   V    +EI+ +     +     + +  VYV+       E  + 
Sbjct: 532 HKSDAGGVKVNIKNDDEVRKAFQEIIEN----AERYDPHAEIMGVYVQHMEPWGTETIIG 587

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSEDVASLCDMLE 178
            + D   G         GG+ +E +     +         +D +  +    +        
Sbjct: 588 SINDSQFGPTVMFG--LGGIFVEILKDVTFRIAPFSKDEALDMVKEINGYGILKGAR--G 643

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISF 228
            + +      +    L +   D    + E+  NP+I+ + G L V+D++I  
Sbjct: 644 EKPKDIEAIAEAVSRLSQLVWDFRDVIKEVDANPVIVYEKG-LSVVDARIIL 694



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 28/174 (16%)

Query: 232 ALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           A ++   +    ++    D     A Q  +    L      + NG G+ +   D  + YG
Sbjct: 263 AAFKQGHVVWAENLDALFDETMALALQKPMRGDNL----LIITNGGGVGVLATDAAEKYG 318

Query: 291 ---------------------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
                                G P N +D+ G AD+ +   + +       V G+++   
Sbjct: 319 VPIKDAPDDLKLLMFKHMPEFGNPKNPVDLTGMADRPEYEGSIRDALKHDWVDGVVVLYC 378

Query: 330 -GGIMRCDVLVKGILSAVKEVKINIPLVMRL-EGANVDIGNRLIAESGLNVITA 381
                    + +GI  A K+  ++ P+ + L  G         + E+G+    +
Sbjct: 379 ETSFTDPQNIAEGIYKAYKDSGVDKPIAVSLVGGERSVKAGEWLIENGIPYYNS 432


>gi|73539026|ref|YP_299393.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72122363|gb|AAZ64549.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 711

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EYQAK  L  + VP+    + ++   A  A  ++  P+ V                    
Sbjct: 494 EYQAKQWLAGFGVPIGAEAMAATPDEAAMAADSIGYPVVV----------KVLSPDIAHK 543

Query: 65  DSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              GGVR+     + V +   E++ + +              V V+  A  + EL + + 
Sbjct: 544 TEVGGVRLGLVDAEQVRTAAGEVVANAVKAMPQAEQ----RGVLVQKMASGVCELIVGVT 599

Query: 124 VD 125
            D
Sbjct: 600 RD 601


>gi|294814280|ref|ZP_06772923.1| Pimeloyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442672|ref|ZP_08217406.1| hypothetical protein SclaA2_16493 [Streptomyces clavuligerus ATCC
           27064]
 gi|294326879|gb|EFG08522.1| Pimeloyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 745

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 80/231 (34%), Gaps = 31/231 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 532 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAAQVGYPVV-----MKASGPQLAHKTEL 586

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE++            G  ++ V V        E  + +
Sbjct: 587 GLVKVG----ITSASQVRDAYRELI------DIARYEGVELDGVLVCQMVGHGLETMVGV 636

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF------KLLIDPLIGVTSEDVASLCDM 176
             D   G    +    GG+ +E V     +         + ++D L G    D       
Sbjct: 637 TRDALFGPTVTVG--LGGVLVEVVQDTAVRVPPFGEGGARAMLDELRGRALFDGVR---- 690

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                       ++   + +   +    L E  INPL++++ G+    LD+
Sbjct: 691 -GGPPLDLDALVEVVLRVQRMALELGGELAELDINPLVVLERGQGAVALDA 740


>gi|163855521|ref|YP_001629819.1| putative acetyl-CoA synthetase [Bordetella petrii DSM 12804]
 gi|163259249|emb|CAP41549.1| putative acetyl-CoA synthetase [Bordetella petrii]
          Length = 722

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 38/234 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  + VPV +  +   V AA  A   +  P+ +           K    ++
Sbjct: 505 LSESESKRLLVAFGVPVTRERLADGVDAAVLAATEIGFPVAL-----------KLDSADI 553

Query: 63  PADSKGGVRVESSLKSVI-SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           P  ++ GV               E L          P    +N + V++ A    E  + 
Sbjct: 554 PHKTEAGVIRLGLRDEAEVQSAAEALQKI---GAAFPHRPVINGILVQEMAKAGTEFMVG 610

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE--- 178
           +  D   G +       GG+D+E V       +    +D       E    L   L+   
Sbjct: 611 MRRDPQFGSLVL--CGFGGVDVELVRDV---AVQLAPVD------REQARDLILSLKRAP 659

Query: 179 -------LQGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDS 224
                            D+   +     D    + ++INP I+ ++G +  +D+
Sbjct: 660 ILTGYRNRPALDLEALIDVVCRVSDLAIDMQGIVEIDINPFILHEHGGV-AVDA 712


>gi|27381487|ref|NP_773016.1| hypothetical protein bll6376 [Bradyrhizobium japonicum USDA 110]
 gi|27354655|dbj|BAC51641.1| bll6376 [Bradyrhizobium japonicum USDA 110]
          Length = 750

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 83/227 (36%), Gaps = 25/227 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY AK LL ++ +PV    V+S+   A  A + +  P+ V+K                  
Sbjct: 512 EYNAKLLLGRHGIPVLAERVVSTPAQAAEAAREVGLPV-VLKIV--------SPDIPHKT 562

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +  G V    ++++     R +L      +       R++ + V        E    ++ 
Sbjct: 563 EVGGVVLDVRTVEAAEEQARALLHRVAEARPDA----RISGILVSPMRSGGIESICGVVN 618

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQA 183
           D   G V       GG+ +E +     +       D         ++     +L  +G A
Sbjct: 619 DAVFGPVVVFG--LGGIHVELLRDVSFRLA---PFDEAEAHRMIREIRGAQILLGARGGA 673

Query: 184 RIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
           R D   L  +L     +       ++ ++INP++++  G  +  LD+
Sbjct: 674 RGDVDALARSLAALSRFAVAHRDQVAEVDINPMMVLPEGEGVVALDA 720


>gi|332159046|ref|YP_004424325.1| hypothetical protein PNA2_1406 [Pyrococcus sp. NA2]
 gi|331034509|gb|AEC52321.1| hypothetical protein PNA2_1406 [Pyrococcus sp. NA2]
          Length = 458

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 28/158 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  M N  G  + T D +   G   AN                      +D+   A  +
Sbjct: 295 RVAIMTNAGGPGVLTADELDKRGLKLANLEEKTIEELRSFLPPMAAVKNPVDMIASARGE 354

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR-LEG 361
                 K++  D +V  +    ++  F G+   +   +GI+ A+KEV    P++   + G
Sbjct: 355 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMSPTEH-AEGIIRAMKEVNNGKPVLAMFMAG 413

Query: 362 ANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
              +    L+ ++G+       D+  AA  +V   K V
Sbjct: 414 YISEKAKELLEKNGIPTYERPEDVAAAAYALVEQAKNV 451


>gi|229042187|ref|ZP_04189941.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH676]
 gi|228727122|gb|EEL78325.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH676]
          Length = 423

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|229101104|ref|ZP_04231870.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-28]
 gi|228682232|gb|EEL36343.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock3-28]
          Length = 423

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYDEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGVASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|160898200|ref|YP_001563782.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1]
 gi|160363784|gb|ABX35397.1| CoA-binding domain protein [Delftia acidovorans SPH-1]
          Length = 729

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 83/231 (35%), Gaps = 18/231 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY++KA+L +  +P A+G + +SV  A +    +  P+  +K+Q                
Sbjct: 513 EYESKAVLAQAGIPFARGRLATSVEQAVAIASEIGWPV-ALKAQ---------SADLSHK 562

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  +    + +    L + +    +      ++ V +E       E+ +    
Sbjct: 563 SDAGGVILNIADAQAMGEAWSRLHANVAAYDSAIA---LDGVLIEAMGQRGLEMIIGARN 619

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D        +A   GG+  E +             + L  +     A L           
Sbjct: 620 DPQ-WGPVILAGL-GGVTAEIMRDARLLDADLSTGEVLRELDRLQGAPLLHGYRGAPALD 677

Query: 184 RIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
           R    +L   L +          +++NP+I++  G+ +  LD+ +  + +A
Sbjct: 678 RQALAELIVRLGQVLRGTPAIREIDLNPVIVLPEGKGVVALDALMLVEHSA 728


>gi|221632152|ref|YP_002521373.1| putative pimeloyl-CoA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156130|gb|ACM05257.1| putative pimeloyl-CoA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 716

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 31/225 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK +L +  +P+     ++ +  A +A   +  P+ V+K+Q             L
Sbjct: 495 LTEYEAKQILARIGLPIPSERWVTCLEEALAAADEIGFPV-VLKAQ---------GPNLL 544

Query: 63  PADSKGGVRVESSLKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                G VR+  S +  + +  + ++ +   T     TG  V             EL L 
Sbjct: 545 HKSDLGAVRLGISDRQALIEAWQGMVETLAATPSLEVTGYLVQR-----QIPHGLELLLG 599

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            L D T G    + S   G +  E+ +D      K  + P        ++ L     L G
Sbjct: 600 CLRDSTFG---MVVSVGLGGEFVEIWRDV--VYRKAPVSPEEA--DRMLSELRGAALLAG 652

Query: 182 QARIDGGDLFPNL-------YKAFCDKDM-SLLEINPLIIMKNGR 218
             R+   D            + A    D+  + E+NPLI+++ GR
Sbjct: 653 HRRLAPRDRRAAAEAIARFSWFAVAAADLIEVAEVNPLIVLEEGR 697


>gi|296501115|ref|YP_003662815.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis BMB171]
 gi|296322167|gb|ADH05095.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis BMB171]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|254388372|ref|ZP_05003607.1| pimeloyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197702094|gb|EDY47906.1| pimeloyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 703

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 80/231 (34%), Gaps = 31/231 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 490 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAAQVGYPVV-----MKASGPQLAHKTEL 544

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE++            G  ++ V V        E  + +
Sbjct: 545 GLVKVG----ITSASQVRDAYRELI------DIARYEGVELDGVLVCQMVGHGLETMVGV 594

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF------KLLIDPLIGVTSEDVASLCDM 176
             D   G    +    GG+ +E V     +         + ++D L G    D       
Sbjct: 595 TRDALFGPTVTVG--LGGVLVEVVQDTAVRVPPFGEGGARAMLDELRGRALFDGVR---- 648

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                       ++   + +   +    L E  INPL++++ G+    LD+
Sbjct: 649 -GGPPLDLDALVEVVLRVQRMALELGGELAELDINPLVVLERGQGAVALDA 698


>gi|228919222|ref|ZP_04082592.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840329|gb|EEM85600.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|206968234|ref|ZP_03229190.1| phosphoribosylamine--glycine ligase [Bacillus cereus AH1134]
 gi|229176878|ref|ZP_04304274.1| Phosphoribosylamine--glycine ligase [Bacillus cereus 172560W]
 gi|206737154|gb|EDZ54301.1| phosphoribosylamine--glycine ligase [Bacillus cereus AH1134]
 gi|228606551|gb|EEK63976.1| Phosphoribosylamine--glycine ligase [Bacillus cereus 172560W]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|75759922|ref|ZP_00739993.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228899017|ref|ZP_04063290.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis IBL
           4222]
 gi|228963380|ref|ZP_04124541.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|74492589|gb|EAO55734.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228796274|gb|EEM43721.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228860592|gb|EEN04979.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis IBL
           4222]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|302552205|ref|ZP_07304547.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing
           protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469823|gb|EFL32916.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing
           protein [Streptomyces viridochromogenes DSM 40736]
          Length = 661

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 79/238 (33%), Gaps = 45/238 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 447 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVV-----MKASGARIAHKTEL 501

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T      G  ++ V V    +   E+ + +
Sbjct: 502 GLVKIG----LTSASQVRDAYREL------TDIARYEGVSLDGVLVCQMVEQGVEMVVGV 551

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE---DVASLCDML-- 177
             D   G    +    GG+ +E +             D  +GV          +   L  
Sbjct: 552 THDDLFGPTVTVG--LGGVLVEVLR------------DTAVGVPPFGEEQARDMLAGLRG 597

Query: 178 --------ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                              ++   + +   +    L E  INPL+++  G+    LD+
Sbjct: 598 RALLDGVRGRPPADLDALVEVVLRVQRMALELGDRLAELDINPLMVLPQGQGAVALDA 655


>gi|222094058|ref|YP_002528115.1| phosphoribosylamine--glycine ligase [Bacillus cereus Q1]
 gi|221238113|gb|ACM10823.1| phosphoribosylamine--glycine ligase [Bacillus cereus Q1]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQATKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|229148688|ref|ZP_04276938.1| Phosphoribosylamine--glycine ligase [Bacillus cereus m1550]
 gi|228634696|gb|EEK91275.1| Phosphoribosylamine--glycine ligase [Bacillus cereus m1550]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|229015680|ref|ZP_04172663.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH1273]
 gi|229021872|ref|ZP_04178442.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH1272]
 gi|228739418|gb|EEL89844.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH1272]
 gi|228745597|gb|EEL95616.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH1273]
          Length = 423

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEDALQAVKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|328953449|ref|YP_004370783.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328453773|gb|AEB09602.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 690

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 71/230 (30%), Gaps = 39/230 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A   L  Y +PV  G +  +   A +A  +   P+ V+K               L    +
Sbjct: 484 ALEFLAAYQIPVVSGRLTHTPEEAAAAAASSGYPV-VLKIIAPEW---------LHKSDR 533

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV +    +  +    E L        +GP G  V            REL L +  D +
Sbjct: 534 GGVILNLMTEEAVRAGFERLQYLSALPFSGPVGILVQKQL------SGRELLLGIKAD-S 586

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---------- 177
           +     +A   GG+  E             ++  L  V       +   L          
Sbjct: 587 TFGPVIVA-GYGGVHTELWGD---------VVKTLAPVNLAQAREMLASLRSYPLLTGYR 636

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                A  +      +L         +  L+INPL+    G    +D+++
Sbjct: 637 GAPPAAIDELAQTLVHLSNLAVAHPTLRELDINPLMATPEGCW-AVDARL 685


>gi|41352957|gb|AAS01100.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++      KG
Sbjct: 1   WTMVAGGGASVVYSDTVADLGYVKELANYGEYSGNPSRAETREYVKTVFDLMARSKHPKG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+KE      +I I + +R  G N 
Sbjct: 61  HKILIIGGAIANFTDVAKTFDGIIDAMKEYADKLREIGIRIYVRRGGPNY 110


>gi|50084972|ref|YP_046482.1| pimeloyl-CoA synthetase [Acinetobacter sp. ADP1]
 gi|49530948|emb|CAG68660.1| pimeloyl-CoA synthetase [Acinetobacter sp. ADP1]
          Length = 701

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 83/230 (36%), Gaps = 25/230 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN  E+ AK +L++  +P    ++I+       A   L  P  V+K              
Sbjct: 482 MN--EFAAKQILKQAGIPCLPEILIAPDDDPTLAANELGYP-LVMKI---------ASAD 529

Query: 61  ELPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                  GG+R+   S + V      +L       Q     ++++ V +       RE  
Sbjct: 530 LPHKTEVGGIRLNLKSAQEVSDAKANMLRHV----QQLAPSAQLDGVILTPMLKGGRETI 585

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDML 177
           + +  D  S     +    GG+ +E V KD   +I    ID    + +E    A L  + 
Sbjct: 586 VGVFND-QSFGPVVMFGL-GGIFVE-VLKDVTFRIAPFGIDQAKAMIAEIKGYALLQGVR 642

Query: 178 ELQGQARIDGGDLFPNL--YKAFCDKDMSLLEINP-LIIMKNGRLRVLDS 224
             Q         L   L  + A        +++NP L++ ++  +  LD+
Sbjct: 643 GEQPADIDALAKLLSTLSEFAAVHADQFDSIDLNPVLVLDQDQGVIALDA 692


>gi|325294623|ref|YP_004281137.1| phosphoribosylamine--glycine ligase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065071|gb|ADY73078.1| Phosphoribosylamine--glycine ligase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 424

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 23/143 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +++KY VP A   V      A+  I+    P+ VVK+   A G+             
Sbjct: 106 SKEMMKKYGVPTADFEVFDDPEKAKEYIRKKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S++  +  I +I    +I +  G  G   N V VED        YL ++ D  
Sbjct: 152 -GVVVAKSVEEALEAIDKI----MIERVFGDAG---NKVVVEDCLFGEEASYL-VVTDGE 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDY 150
           + +    A     +  E+   + 
Sbjct: 203 NFIPLATAQDHKAVFDEDKGPNT 225


>gi|13475061|ref|NP_106624.1| hypothetical protein mll6062 [Mesorhizobium loti MAFF303099]
 gi|14025811|dbj|BAB52410.1| mll6062 [Mesorhizobium loti MAFF303099]
          Length = 409

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 22/104 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VP+    + ++    ESA + +  P+ +VK  + +G R              
Sbjct: 116 RQLLAEAGVPIPAYRMAANAAEVESASEEIGLPV-IVKPAVGSGSR-------------- 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GVR+  ++  +      +LG   I + +         + VE+ A
Sbjct: 161 GVRLCRNVDELAEHTTYLLGEEHIWRSSP-------RILVEEFA 197


>gi|92113219|ref|YP_573147.1| GCN5-related N-acetyltransferase [Chromohalobacter salexigens DSM
           3043]
 gi|91796309|gb|ABE58448.1| GCN5-related N-acetyltransferase [Chromohalobacter salexigens DSM
           3043]
          Length = 893

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 26/262 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +A A+L  Y++P    +V  +   A  A + L  P+ V+K                
Sbjct: 491 LTEPEAVAVLAAYDIPTVPAIVARTPEEASQAAQRLGFPV-VLKI--------LSPDISH 541

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
            +D  G     +S  +V     ++L +     +     +RV    V+         EL +
Sbjct: 542 KSDVGGVQLNLASPGAVTQAAEDMLAAV----RRAQPEARVEGFNVQPMIRRPGAHELIV 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
            +  D   G    +   QGG  +E +     + +    ++PL+      ++     L   
Sbjct: 598 GVAEDSLFG-PVIVF-GQGGTAVEVIGD---RVVGLPPLNPLLARDMIASTRVARLLRGY 652

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
            +               + +   D   +  L+INPL+   +G +  LD++I        R
Sbjct: 653 RDRPAADLEAVTATLIKVSQLVSDLTRVVELDINPLLTDASG-VIALDARIVVRAEGDQR 711

Query: 236 HLDIQELRDVSEEDSREIEAKQ 257
                       E+  E  A Q
Sbjct: 712 KPLAIRPYPQQLEEEIETRAGQ 733


>gi|327439812|dbj|BAK16177.1| acyl-CoA synthetase [Solibacillus silvestris StLB046]
          Length = 721

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 19/225 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +A  +L +Y +P+ K  V  S   A      +  P+ V+K           +    
Sbjct: 497 LSESEASEVLARYGIPITKRYVTLSAEEAVERALQIGFPV-VLKID--------SQQIPH 547

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             ++       SS + V     EI    +   +     + +N V V++      E+ +  
Sbjct: 548 KTEADAIRLNVSSEEEVKEAFMEI----MKNARNYNPAAVLNGVSVQEMLPQGTEVIIGA 603

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D        +A   GG+ +E       +       D    +      ++ D       
Sbjct: 604 KND-EVFGPVIMAGL-GGIFVEVFKDIAFKIAPLSRQDAGTLLDELQAKAILDGARGQVA 661

Query: 182 QARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDS 224
             +    D+   + +   D    +  L+INPLI+ +NG ++  D+
Sbjct: 662 VDKEAIIDVLLRVSQLMLDYRDQIKELDINPLIVYENG-IKAADA 705


>gi|228906062|ref|ZP_04069951.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis IBL
           200]
 gi|228853471|gb|EEM98239.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis IBL
           200]
          Length = 423

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|157930993|gb|ABW04211.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 111

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D +   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTVADMGYVNELANYGEYSGNPTRTETREYVKTVLDLMTRSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N 
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVKIYVRRGGPNY 111


>gi|291542757|emb|CBL15867.1| phosphoribosylamine--glycine ligase [Ruminococcus bromii L2-63]
          Length = 421

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 63/311 (20%), Positives = 111/311 (35%), Gaps = 57/311 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK  V +    A   IK       VVK+   A G+             
Sbjct: 106 SKNLMKKYGIPTAKYEVFNDAQKAIDYIKNENTAPVVVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S+   I  ++EI    +  K+ G +G   N + +E+         +S+L    
Sbjct: 153 -GVIIAQSVDEAIEAVKEI----MEDKKFGDSG---NNIVIEEFLTGPE---VSVLAFTD 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSEDVASLCDMLELQGQAR 184
              V  + S++      + A D  + +       I P    T E      D + +     
Sbjct: 202 GKCVKPMVSSKD----HKRAFDNDEGLNTGGMGTISPNPYYTDEIAKECMDKIFIPTIEA 257

Query: 185 --IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQE 241
              +G      LY               L+I  NG ++   +++   D  A      ++ 
Sbjct: 258 MNKEGRPFKGCLY-------------FGLMITPNGPKVIEYNARFG-DPEAQVVLPRLK- 302

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMV-NGAGLAMATMDIIKLYGGAPANFLDVG 300
             D+ +     I+ K  +L     +G   C+V    G  ++    I+++G      L+  
Sbjct: 303 -TDLVDICEAVIDEKLSDLDIEWDNGAAACVVMASGGYPVSYKKGIEMFG------LNDN 355

Query: 301 GGADQDKVAAA 311
           GG D   V  A
Sbjct: 356 GGVDGAIVYHA 366


>gi|14520517|ref|NP_125992.1| succinyl-coa synthetase, beta subunit related protein [Pyrococcus
           abyssi GE5]
 gi|5457733|emb|CAB49223.1| acdB acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta chain
           [Pyrococcus abyssi GE5]
          Length = 232

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 78/224 (34%), Gaps = 22/224 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +L+ Y +P+ +  V      A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV++         + RE   + +   +     + +  V +     + +E+ + ++ 
Sbjct: 73  SDAGGVKINIKNDE---EAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQA 183
           D   G         GG+ +E +     +       D L  +       +       +   
Sbjct: 130 DPQFGPAVMFG--LGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEKPVN 187

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                D+   + +   +  ++  L+INP+   ++     +D+++
Sbjct: 188 IDALADIIVKVGELALELPEIRELDINPIFAYED-EAVAVDARM 230


>gi|154252417|ref|YP_001413241.1| CoA-binding domain-containing protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156367|gb|ABS63584.1| CoA-binding domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 893

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 32/236 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK LL  Y VPV    ++SS   A      +  P+  +K                
Sbjct: 493 LSEAEAKHLLAAYGVPVVDTRIVSSASEAARTADEIGYPV-ALKI--------LSPDITH 543

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
            +D  G      + ++V      +L            G+ +    V+         EL L
Sbjct: 544 KSDVGGVALGLDNAEAVSEAASRMLSRV----ARFCPGAEIEGFTVQQMVRKPDAFELIL 599

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASL 173
            ++ D  +     +   QGG  +E V          + + PL    ++D+         L
Sbjct: 600 GIVDD-ATFGPVLLF-GQGGTSVEVVRDKA------MALPPLNRALADDLISRTRVSRLL 651

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                     R         L     D  +++ L+INPL   +NG +  LD+++  
Sbjct: 652 EGYRGRPPADREGIASALMALGDLAADNPEVAELDINPLWADENG-VIALDARVRI 706


>gi|288941452|ref|YP_003443692.1| CoA-binding domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288896824|gb|ADC62660.1| CoA-binding domain protein [Allochromatium vinosum DSM 180]
          Length = 892

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 86/228 (37%), Gaps = 22/228 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +AKA+L  + +P  + ++  + + A  A + L  P+ +  +      +      +L  D 
Sbjct: 494 EAKAILSAFRIPTMQAILARTPNEALMAAQALGFPVVMKINSPDLEHKSDVDGVKLNIDD 553

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              VR   +   ++   + +             G  V    V   A   REL + +  D+
Sbjct: 554 AQSVRRTFT--EIMERAKRL------RPDARFDGITVER-MVSTRA--ARELMIGVFRDK 602

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE----LQGQ 182
             G V    +  GG  +E +     + +    ++  I  T  D   +  ++     +   
Sbjct: 603 IFGPVILFGA--GGTKVEVLGD---RALGLPPLNAFIIETMIDHTRVARLMGAFQHMPPM 657

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
            R+    +   + +  C+  ++  ++INPLI   +  +  +D +I  D
Sbjct: 658 NRVALARILQRVSEMVCELPEIISMDINPLI-GNDKEVIAVDVRIKVD 704


>gi|159900267|ref|YP_001546514.1| acetyl coenzyme A synthetase subunit alpha [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159893306|gb|ABX06386.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 697

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 87/234 (37%), Gaps = 32/234 (13%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A+ ++  Y + +    +  S   A    K +  P+ +                 L  
Sbjct: 484 EIEAREVMAAYGMRLPDSRLSRSPEEAAEIAKEIGFPVVM----------KISSPDILHK 533

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGVRV  +     SD  E++       +     +R+  V V++ A   RE+ + +  
Sbjct: 534 SDIGGVRVGIADPQAASDSYELIAYR---ARKFSPNARIWGVLVQEMARKGREVLVGVSR 590

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQK--IFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           D   G  A I    GG+ +E +     +   + +  +        E + ++     LQG 
Sbjct: 591 DPQFG--ALIGVGMGGIYVEVLKDVVFRLAPLSREEV-------REQLRAIRSFPLLQGV 641

Query: 183 ARIDGG------DLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                       D+   + +   D  ++  ++INPL++   G  + VLD++I  
Sbjct: 642 RGEQTADLEAVEDIVLRVSQLVSDFPEIVEMDINPLVVYNRGEGVIVLDARIIL 695


>gi|269926006|ref|YP_003322629.1| CoA-binding domain protein [Thermobaculum terrenum ATCC BAA-798]
 gi|269789666|gb|ACZ41807.1| CoA-binding domain protein [Thermobaculum terrenum ATCC BAA-798]
          Length = 915

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 40/275 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E++ K +L  Y++P  + +   ++  A  A   +  P+ V         +       L
Sbjct: 508 LTEWETKQILNYYSIPTVRTIPAHTLDEALEAAIEIGYPVVVKLLSNRITHKTDVGGVYL 567

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              +  GV+           ++  LG           G  V  +  E G     EL +  
Sbjct: 568 NITTPEGVK------DAWHTMKSALGEDF-------DGVTVQPMIKESGY----ELIIGS 610

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----E 178
            VD   G V    S  GG  +E       +++    ++  +     +   +   L     
Sbjct: 611 SVDPQFGPVLVFGS--GGQLVEVYRD---RELGLPPLNTTLARRMMERTKIFQALLGVRG 665

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN--ALYR 235
            +         +     +   D  ++  +EINPL+   N  +  LD++    D   + + 
Sbjct: 666 RKRVDISALEQIIVRFSQLVVDYPEIKEIEINPLLASSN-NILALDARAILHDKDVSSFP 724

Query: 236 HLDI----------QELRDVSEEDSREIEAKQHNL 260
              I            L D +E   R I A+   L
Sbjct: 725 RPAIRPYPAEYIWRVNLEDGTELTIRPIRAEDEPL 759


>gi|229009783|ref|ZP_04167003.1| Phosphoribosylamine--glycine ligase [Bacillus mycoides DSM 2048]
 gi|228751401|gb|EEM01207.1| Phosphoribosylamine--glycine ligase [Bacillus mycoides DSM 2048]
          Length = 423

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|14591546|ref|NP_143628.1| hypothetical protein PH1788 [Pyrococcus horikoshii OT3]
 gi|82407393|pdb|1WR2|A Chain A, Crystal Structure Of Ph1788 From Pyrococcus Horikoshii Ot3
 gi|3258224|dbj|BAA30907.1| 238aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 238

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 78/233 (33%), Gaps = 29/233 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK---SQIHAGGRGKGRFKE 61
           EY+AK +L+ Y +PV +  +  ++  A    K +  P+ V+K    QI      K     
Sbjct: 22  EYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPV-VLKLMSPQILHKSDAKVVMLN 80

Query: 62  LPADSKGGVRVESSLKSVISDI--REILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           +  + +   + E   ++        EILG                 V V       RE+ 
Sbjct: 81  IKNEEELKKKWEEIHENAKKYRPDAEILG-----------------VLVAPMLKPGREVI 123

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLE 178
           + +  D   G         GG+ +E +     + +     D    +       +      
Sbjct: 124 IGVTEDPQFGHAIMFG--LGGIFVEILKDVTFRLVPITEKDARKMIQEIKAYPILAGARG 181

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
            +        D+   + K   D    + E+  NP+ +   G    ++DS+I  
Sbjct: 182 EEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFVYNKGEGAVIVDSRIIL 234


>gi|307545088|ref|YP_003897567.1| hypothetical protein HELO_2498 [Halomonas elongata DSM 2581]
 gi|307217112|emb|CBV42382.1| K09181 hypothetical protein [Halomonas elongata DSM 2581]
          Length = 892

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 22/240 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +A A+L  Y++P A  +   +   A  A + L  P+ V         R        
Sbjct: 491 LTEPEATAILAAYDIPTAPAITARTPEEASQAAQQLGFPVVV-----KILSRDISH---- 541

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELY 119
                GGV++  +S  +V+    ++L S     Q+    +R++   V+         EL 
Sbjct: 542 -KSDVGGVQLNLASPGAVLQAAEDMLASI----QSIAPKARIDGFNVQSMIHRPDAHELI 596

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           + +  D   G +      QGG  +E +            +     +    ++ L      
Sbjct: 597 VGVAEDSVFGPLILFG--QGGTAVEVIGDRVVGLPPLNQLLAREMIQESRISRLLRGYRD 654

Query: 180 QGQARIDGGDL-FPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +  A ++   L    L    C  + +  L+INPL+   +G +  LD++I       +R  
Sbjct: 655 RPAADLEAITLTLIKLSHLVCGLERVVELDINPLLADPSG-VIALDARIVVRAERAHRRP 713


>gi|300175837|emb|CBK21833.2| unnamed protein product [Blastocystis hominis]
          Length = 905

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 77/235 (32%), Gaps = 28/235 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  Y +PV + VV  +V  A    + +  P+ V  +      +      +L
Sbjct: 508 LTENESKQLLASYGIPVVQTVVCETVEKAVETAEGMKYPVVVKLNSETITHKSDVGGVQL 567

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               K GV    +    I +  E LG        G  G  V             EL    
Sbjct: 568 NIRDKEGVVTAWN---TIRNNLEKLGKL-----DGFQGVTVQRQL---NLSDGYELIFGC 616

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDMLEL 179
            +D   G    +  T GG  +E            + + PL    +        +   L+ 
Sbjct: 617 NLDNQVG-PVIVFGT-GGTLVEVYKDSN------MALPPLNTAQARHCMSKTKIYKALKG 668

Query: 180 QGQARIDGGDLFPNLYKAFCDK--DMSL---LEINPLIIMKNGRLRVLDSKISFD 229
                    DL   ++  F +   D      L+INP++      +  LD+++   
Sbjct: 669 VRGKAPCDLDLLDQVFVRFSELISDQHWIKELDINPMLATPT-DIIALDARVVLH 722



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 33/145 (22%)

Query: 271 CMVNGAGLAMATMDIIKLYGGA----------------PA-----NFLDVGGGADQDKVA 309
            + N  G  + T D I   GG                 PA     N +DV G A  +  A
Sbjct: 325 VITNAGGPGVITTDEIVTGGGQLAKVSPEAMEQYNSFLPAAWSHSNPVDVLGDAPPEMYA 384

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK-----EVKINIPLVMRLEGANV 364
            A K+   D    G+L+     I+    + K   +AV+      ++    L   + G ++
Sbjct: 385 KALKVAGDDHESDGMLV-----ILTPQSVTKPTETAVELAKYAHIEGKPVLASWMGGNDL 439

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQ 389
           + G +++ E+G+ V  + D   AA+
Sbjct: 440 EKGRQILREAGIPVFESPDT--AAK 462


>gi|300123828|emb|CBK25099.2| unnamed protein product [Blastocystis hominis]
          Length = 905

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 77/235 (32%), Gaps = 28/235 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  Y +PV + VV  +V  A    + +  P+ V  +      +      +L
Sbjct: 508 LTENESKQLLASYGIPVVQTVVCETVEKAVETAEGMKYPVVVKLNSETITHKSDVGGVQL 567

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               K GV    +    I +  E LG        G  G  V             EL    
Sbjct: 568 NIRDKEGVVTAWN---TIRNNLEKLGKL-----DGFQGVTVQRQL---NLSDGYELIFGC 616

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDMLEL 179
            +D   G    +  T GG  +E            + + PL    +        +   L+ 
Sbjct: 617 NLDNQVG-PVIVFGT-GGTLVEVYKDSN------MALPPLNTAQARHCMSKTKIYKALKG 668

Query: 180 QGQARIDGGDLFPNLYKAFCDK--DMSL---LEINPLIIMKNGRLRVLDSKISFD 229
                    DL   ++  F +   D      L+INP++      +  LD+++   
Sbjct: 669 VRGKAPCDLDLLDQVFVRFSELISDQHWIKELDINPMLATPT-DIIALDARVVLH 722



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 25/141 (17%)

Query: 271 CMVNGAGLAMATMDIIKLYGGA----------------PA-----NFLDVGGGADQDKVA 309
            + N  G  + T D I   GG                 PA     N +DV G A  +  A
Sbjct: 325 VITNAGGPGVITTDEIVTGGGQLAKVSPEAMEQYNSFLPAAWSHSNPVDVLGDAPPEMYA 384

Query: 310 AAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
            A K+   D    G+L+ +    + +     + +      ++    L   + G +++ G 
Sbjct: 385 KALKVAGDDHESDGMLVILTPQSVTKPTETAEELAKYA-HIEGKPVLASWMGGNDLEKGR 443

Query: 369 RLIAESGLNVITAIDLDDAAQ 389
           +++ E+G+ V  + D   AA+
Sbjct: 444 QILREAGIPVFESPDT--AAK 462


>gi|320100341|ref|YP_004175933.1| acetyl-CoA synthetase (ADP-forming) subunit beta [Desulfurococcus
           mucosus DSM 2162]
 gi|319752693|gb|ADV64451.1| acetyl-CoA synthetase (ADP-forming) beta subunit [Desulfurococcus
           mucosus DSM 2162]
          Length = 232

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 84/229 (36%), Gaps = 18/229 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A  L++ Y +P  + VV+ S   A +    +  P+  +K               
Sbjct: 17  KLLEHEAFQLIKHYGIPSPEVVVVKSPEEAVALADKVGYPI-ALKIV--------SPDIS 67

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +D  G      S + V   ++E+L     T       +R+  V + + A    E+ + 
Sbjct: 68  HKSDVGGVKLGLRSREEVGKAVKEMLE----TVPRRAPSARIVGVLMYNMAPQGLEVIIG 123

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
            + D   G V       GG+ +E +     +       D L  +     AS+ +      
Sbjct: 124 GVRDSVFGPVVMFG--LGGIFVEVLKDVSFRVSPVSKEDALTMLKEIKSASILEGYRGQP 181

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              +    ++     +   D  ++  +++NP++    G +  +D++I  
Sbjct: 182 PVDKDAIAEMIVKTARLMEDNPEIESIDLNPVMAYSKGAI-AVDARIIL 229


>gi|229165265|ref|ZP_04293053.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH621]
 gi|228618212|gb|EEK75249.1| Phosphoribosylamine--glycine ligase [Bacillus cereus AH621]
          Length = 423

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVKYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|296128164|ref|YP_003635414.1| CoA-binding domain protein [Cellulomonas flavigena DSM 20109]
 gi|296019979|gb|ADG73215.1| CoA-binding domain protein [Cellulomonas flavigena DSM 20109]
          Length = 707

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 91/241 (37%), Gaps = 29/241 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           + E++AK LL  + +   +  V +    A +A+  L   G   VVK  + A    K    
Sbjct: 473 LDEHEAKTLLEGHGLRTPRRHVATDRAQAHAALADLVHGGGRAVVKV-LAADVPHKSDVG 531

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +    +    ++ +L ++ +  R        T   GP         +E+ A    EL +
Sbjct: 532 GVHVGVRDDAGLDRALDAIDAIPRGADPDDRATDGAGPDVRAPRRYLIEELAAPGPELIV 591

Query: 121 SLLVDRTSGMVAFIA----STQGGMDI--------EEVAKDYPQKIFKLLIDPLIGVTSE 168
             + D   G V  +     + + G +          E A +  + +   ++    G    
Sbjct: 592 GAVRDPVFGPVVLLGLGGVAAELGGEPVLRLAPLSAERAHEMVRALPPAVLHGFRGAPPV 651

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
           DVA+L D+L   G      G             D++ L++NP+ +  +G + VLD+ +  
Sbjct: 652 DVAALADVLRAVGDVVTTYG-------------DVTELDLNPVRLTADGPV-VLDALVVA 697

Query: 229 D 229
           D
Sbjct: 698 D 698


>gi|209885939|ref|YP_002289796.1| N-acetyltransferase [Oligotropha carboxidovorans OM5]
 gi|209874135|gb|ACI93931.1| N-acetyltransferase [Oligotropha carboxidovorans OM5]
          Length = 898

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 41/243 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA+ + Y +PV + +V  S    E A   L      V  ++ +           
Sbjct: 489 LTEPEAKAVAKAYGIPVPEIIVAHSPDDVEQAATDLLANSNKVAVKLLS-------KSIT 541

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD--ILRELYL 120
                GGV +     +   +  E +   L   Q  P G  +    V+   +    +EL L
Sbjct: 542 HKSDVGGVVLSLETAAAAREAAEAITRRL--HQHRPDG-TIEGFAVQPMIERRQAQELIL 598

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED----------- 169
            +  D   G +    +  GG+ +E +             D  IG+   D           
Sbjct: 599 GVNRDAIFGPIILFGA--GGVAVEVMD------------DIAIGLPPMDDILAGDLIDRT 644

Query: 170 --VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKI 226
                L    + +   R         L +   D      ++INPL+   +G +  LD++I
Sbjct: 645 RIGRLLAGFRDRKPADRAAISQALNGLSQLVVDFPCVTAVDINPLLADSDG-VIALDARI 703

Query: 227 SFD 229
             D
Sbjct: 704 EID 706



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 24/134 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGA---------------------PANFLDVGGGADQD 306
            +G + NG G  +  +D +  + G                       AN +D+ G A  +
Sbjct: 298 RVGIVTNGGGAGVLAVDRLMDFHGELAVLSPKTIAALDQTLPSNWSHANPVDIVGDAPPE 357

Query: 307 KVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKIN-IPLVMRLEGANV 364
           +  AA + + +D  V  +++ N   G+         + S  K   IN  P++    G   
Sbjct: 358 RYRAAVEAVAADPDVDVLMVMNCPTGVASSSDAATTVASLAKNGTINDKPVLTCWLGEQS 417

Query: 365 DIG-NRLIAESGLN 377
             G  RL+  +G+ 
Sbjct: 418 ARGARRLLQAAGIT 431


>gi|262089323|gb|ACY24543.1| CoA-binding domain-containing protein [uncultured crenarchaeote
           76h13]
          Length = 706

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 104/331 (31%), Gaps = 45/331 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +L +Y + V K  +++S   A    K +  P  V K               L     
Sbjct: 26  SKEILGEYGIKVPKYALVTSSDEAVQKSKEIGFP-LVAKIV---------SPDILHKTDV 75

Query: 68  GGVRVESSLK-SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV+V  S +  V     ++                V  V +E       EL + L  D 
Sbjct: 76  DGVKVGLSSEAEVKEAFDDMFNRL-------KEKFDVKGVLLEKMVPKGVELIVGLQNDF 128

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSEDVASLCDMLELQGQA 183
             G  + +    GG+  E       + +       +  L  +  +D+         +   
Sbjct: 129 QFG-PSIMVGL-GGIYTELFKDVSFRVLPVTKNEAVKMLESLRGKDILK--GFRGSKPID 184

Query: 184 RIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISF----DDNALYRHL 237
                +   N+     D       ++ NP+++  +    V+D+KI       D+A+    
Sbjct: 185 LDMLSEAIVNIGNLGVDMAGKYESIDFNPVVVYPD-SYYVVDAKIILKEKSSDDAISM-- 241

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL 297
               + D S  D          +     +G I       G ++    +   Y G     +
Sbjct: 242 ---AIPDSSYMDLFFNAKSVALIGASPEEGKI-------GNSVMESLVKHDYKGKV-YPV 290

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           +  G  +   V A   ++  +  V  +++ +
Sbjct: 291 NAKGYPEIMGVKAYKNLMDIEEPVDVVIVTV 321


>gi|18250631|emb|CAC83622.1| feruloyl-CoA synthetase [Delftia acidovorans]
          Length = 723

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 23/233 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY++KA+L +  +P A+G + +S   A +    +  P+  +K+Q                
Sbjct: 508 EYESKAVLAQAGIPFARGRLATSAEQAVAIASEIGWPV-ALKAQ---------SADLSHK 557

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  +    + +    L + +    +      ++ V +E       E+ +    
Sbjct: 558 SDAGGVILNIADAQAMGEAWGRLHANVAAYDSAIA---LDGVLIEAMGQRGLEMIIGARN 614

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS---LCDMLELQG 181
           D        +A   GG+  E +A    +  +     P     +        L        
Sbjct: 615 DPQ-WGPVILAGL-GGVTAEIIAM---RACWTPTCPPARCCANWTACRPPLLHGYRGAPA 669

Query: 182 QARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNG-RLRVLDSKISFDDNA 232
             R    +L   L +          +++NP+I++  G  +  LD+ +  + +A
Sbjct: 670 LDRQALAELIVRLGQVLRGTPAIREIDLNPVIVLPEGLVVVALDALMLVEHSA 722


>gi|14520569|ref|NP_126044.1| hypothetical protein PAB2113 [Pyrococcus abyssi GE5]
 gi|5457785|emb|CAB49275.1| Hypothetical protein [Pyrococcus abyssi GE5]
          Length = 238

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 79/236 (33%), Gaps = 27/236 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y +PV +  +  ++  A    K +  P+ +  +  QI      +     +
Sbjct: 22  EYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVMLNI 81

Query: 63  PADSKGGVRVESSLKSVISD--IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             + +   + E   ++        EILG                 V +       RE+ +
Sbjct: 82  KDEEELKKKWEEIHENAKKYNPNAEILG-----------------VLIAPMLKPGREVII 124

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLEL 179
            +  D   G         GG+ +E +     + +     D    +T      +       
Sbjct: 125 GVTEDPQFGHAIMFG--LGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGE 182

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISFDDNA 232
           +        D+   + K   +    + E+  NP+ +   G    ++D++I     A
Sbjct: 183 EPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA 238


>gi|52549000|gb|AAU82849.1| conserved hypothetical protein [uncultured archaeon GZfos1D1]
          Length = 209

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 23/229 (10%)

Query: 1   MNIH-EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           M I  E+++K LL +Y +PV    V  S   A      +  P+                 
Sbjct: 1   MKILTEHESKKLLAEYGIPVTTESVARSREDALLLACEIGFPV--------------AMK 46

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
              P  +         L     D+     + +   +     +R++ V V++      E+ 
Sbjct: 47  ISSPDIAHKNAAGCVLLDVGEQDVGAAYNALVKNVKKHAPNARIDGVLVQEMVPRGTEIV 106

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           + +  D   G         GG+ +E +     + +     D +     E    +     L
Sbjct: 107 IGVKRDPQFGHAVMFG--LGGVFVEVLDDVSFRIVPLTKQDAI-----EMTEEIRGRSIL 159

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            G       D    + +    + +  L+INPL+    G +  +D+++ F
Sbjct: 160 AGCDVGAIVDTILKVSEMAAKEKIFELDINPLVACGIG-VVAVDARVVF 207


>gi|228956721|ref|ZP_04118507.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802909|gb|EEM49741.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 423

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|157930989|gb|ABW04209.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D +   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTVADMGYVSELANYGEYSGNPTRTETREYVKTVLDLMTRSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVKIYVRRGGPN 110


>gi|229107961|ref|ZP_04237588.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock1-15]
 gi|228675464|gb|EEL30681.1| Phosphoribosylamine--glycine ligase [Bacillus cereus Rock1-15]
          Length = 423

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|30018542|ref|NP_830173.1| phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 14579]
 gi|229125786|ref|ZP_04254812.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-Cer4]
 gi|229143084|ref|ZP_04271517.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-ST24]
 gi|29894083|gb|AAP07374.1| Phosphoribosylamine--glycine ligase [Bacillus cereus ATCC 14579]
 gi|228640357|gb|EEK96754.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-ST24]
 gi|228657643|gb|EEL13455.1| Phosphoribosylamine--glycine ligase [Bacillus cereus BDRD-Cer4]
          Length = 423

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|147920675|ref|YP_685524.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion
           [uncultured methanogenic archaeon RC-I]
 gi|110620920|emb|CAJ36198.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion
           [uncultured methanogenic archaeon RC-I]
          Length = 694

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 24/223 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKGG 69
           L  Y +P  K  ++ S   A +  K    P+   +V  QI            +     GG
Sbjct: 489 LEAYGIPTLKYRIVDSADKAVATAKEFGYPVVMKIVSPQI------------VHKSDVGG 536

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           VRV       + +        +   +      +++ V ++  A   +E+ L +  D   G
Sbjct: 537 VRVGLDSDEAVLNA---YNKMMRDVKVAVPHCQISGVLIQQMAVGGKEVILGVNRDPQFG 593

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-VTSEDVASLCDML-ELQGQARIDG 187
               +    GG+ +E V KD   ++  L     +G +       L + +   +       
Sbjct: 594 -PLIMFGL-GGIYVE-VLKDVQFRVAPLSEHDALGMIYGIKAHQLLEGVRGEKPADIEKL 650

Query: 188 GDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +    L +   D  ++  L+INP+ + + G     LD++++ 
Sbjct: 651 VEFLQRLSQLVTDFPEILELDINPVKVYEKGTGCLALDARMTI 693


>gi|323705831|ref|ZP_08117403.1| cyanophycin synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534827|gb|EGB24606.1| cyanophycin synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 875

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 16/112 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++++Y +PV +G V  + + A +  + +  P+ VVK   + G +GKG F  L    + 
Sbjct: 217 KKIIKEYGLPVPEGDVAYNENDAIAIAEEIGYPV-VVKP--YNGNQGKGVFLNLSNKEEL 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGADIL 115
            V           + + I    ++ K       RV       V V +     
Sbjct: 274 IV--------AYRNAKNISDIVIVEKHIKGKNYRVLVVGDRVVAVAERIPAR 317


>gi|14590635|ref|NP_142703.1| hypothetical protein PH0766 [Pyrococcus horikoshii OT3]
 gi|3257174|dbj|BAA29857.1| 457aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 457

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 28/157 (17%)

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDK 307
           +  M N  G  + T D +   G   A                     N +D+   A  + 
Sbjct: 296 VAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGED 355

Query: 308 VAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR-LEGA 362
                K++  D +V  +    ++  F G+   +   +GI+ AVKEV    P++   + G 
Sbjct: 356 YYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEH-AEGIIRAVKEVNNEKPVLAMFMAGY 414

Query: 363 NVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
             +    L+ ++G+       D+  AA  +V   K V
Sbjct: 415 VSEKAKELLEKNGIPTYERPEDVASAAYALVEQAKNV 451


>gi|298530844|ref|ZP_07018246.1| GCN5-related N-acetyltransferase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510218|gb|EFI34122.1| GCN5-related N-acetyltransferase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 901

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 96/243 (39%), Gaps = 32/243 (13%)

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD--NALYRH 236
           L  ++  +          A  +K + +++ +   I        +DS +S DD  + ++R 
Sbjct: 215 LYMESVSNARKFISAARSASRNKPLVVIKGDKFNISAVRDASYIDSPVSTDDIYDGVFRR 274

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IGCMVNGAGLAMATMDIIKLYGGAPAN 295
             +  + D++E      +A +    Y  L G+ +  + NG G AM   D++K  GG+ A 
Sbjct: 275 AGMLRVFDLAELF----DAVEAMARYKPLRGDRLAILSNGGGPAMMARDVLKTRGGSLAE 330

Query: 296 FLD-----VGGG----------------ADQDKVAAAFKIITSDSSVKGILIN-IFGGIM 333
             +     +  G                A  +  + A +I+  D +V  I++  +     
Sbjct: 331 LSEQTRQQLQHGLQAELSHQEPVRIIDHASSETYSRALEILIQDQNVDAIMVIHVPTAFA 390

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVH 393
               +   +++++   + N+ + + L   +     R+ A +G+   T    D AA+  + 
Sbjct: 391 SSQDIAGAVINSLGRTRKNV-ITVWLGEKDAAQARRMFALAGIP--TYETPDQAARLFMD 447

Query: 394 AVK 396
            V+
Sbjct: 448 MVR 450


>gi|157930991|gb|ABW04210.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTIADMGYVSELANYGEYSGNPTRTETREYVKTVLDLMTRGKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVKIYVRRGGPN 110


>gi|228983540|ref|ZP_04143745.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228776136|gb|EEM24497.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 423

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+  +
Sbjct: 152 GVTVAMTLEEALQATKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGKT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|206974370|ref|ZP_03235287.1| phosphoribosylamine--glycine ligase [Bacillus cereus H3081.97]
 gi|206747610|gb|EDZ59000.1| phosphoribosylamine--glycine ligase [Bacillus cereus H3081.97]
          Length = 423

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+  +
Sbjct: 152 GVTVAMTLEEALQATKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGKT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|89901129|ref|YP_523600.1| GCN5-like protein N-acetyltransferase [Rhodoferax ferrireducens
           T118]
 gi|89345866|gb|ABD70069.1| GCN5-related N-acetyltransferase [Rhodoferax ferrireducens T118]
          Length = 892

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 96/247 (38%), Gaps = 27/247 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K+LL  +++PV + ++  SV+ A      L  P+  +K                
Sbjct: 481 LTEMESKSLLAAFHIPVTRTILARSVNEAIMIATQLGFPV-ALKID--------SPDISH 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D +G      +   V     ++     +T+       R+N V +++ +     RE+Y+
Sbjct: 532 KSDVQGVALNILNAVGVRDTYVDM--METVTRLQPEA--RINGVTIQNMSSQQRGREVYV 587

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
            ++ D   G V    S  GG  IE +     +      ++  +     + A + + L   
Sbjct: 588 GMVTDDPFGPVIAFGS--GGTMIELINDRVMEL---PPLNQFLARRLIERARVAETLGDW 642

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN-ALY 234
                        +   + +  C+   +  ++INP+I+ + G +  +D++I  D+     
Sbjct: 643 RGAAPVNMEALEQILLRVSEMVCELPQLREMDINPIIVDETGAV-AVDARIVIDNTPPSA 701

Query: 235 RHLDIQE 241
           RH +   
Sbjct: 702 RHYNHLA 708


>gi|317406543|gb|EFV86738.1| acetyl-CoA synthetase [Achromobacter xylosoxidans C54]
          Length = 344

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 15/132 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E QAKAL  ++ VP  + + + S   A  A + L  P  V+K               
Sbjct: 122 SLDEAQAKALFARFGVPGVREIAVRSPAEAVEAARQLG-PRVVLK---------LLSGDI 171

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV V  +   +   +R +            TG       V++      E+ L 
Sbjct: 172 LHKSEVGGVAVNLTPDEIGPRLRRM-----AADVQRHTGRVAEAFLVQEMVAGAAEVILG 226

Query: 122 LLVDRTSGMVAF 133
              D     +  
Sbjct: 227 FHRDPLGTAILL 238


>gi|217969079|ref|YP_002354313.1| CoA-binding protein [Thauera sp. MZ1T]
 gi|217506406|gb|ACK53417.1| CoA-binding domain protein [Thauera sp. MZ1T]
          Length = 728

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 21/229 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +++E++A+ALLR + V VA+ +V  +      AI+        +K               
Sbjct: 508 DLYEHEARALLRTHGVAVAEEIVAHTADELAVAIERFGDQPLAMKVV---------SKDI 558

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV++    ++ + +        L   +     + +  V +   A    E+ + 
Sbjct: 559 LHKSDAGGVKLNLVGEAALREA---WAQILAGCRAYDADADIRGVLLTPMARKGVEVIVG 615

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           ++ D   G    +    GG+ +E +     + I     D    V       +     ++G
Sbjct: 616 VVRDPIFG-PVLMFGL-GGIFVEILEDVAFRAIPLSRRDAETMVDQLGARKVL--AGVRG 671

Query: 182 QARIDGGDLFPNLYKAFCDKDMS----LLEINPLIIMKNGRLRVLDSKI 226
           +A +D   L   L +             L++NP+I   +G   V+D++I
Sbjct: 672 EAAVDKVALVELLLRVSSIVSAYPQLSELDLNPVIAYPDG-YAVVDARI 719


>gi|56476649|ref|YP_158238.1| Acetyl-CoA synthetase [Aromatoleum aromaticum EbN1]
 gi|56312692|emb|CAI07337.1| predicted Acetyl-CoA synthetase [Aromatoleum aromaticum EbN1]
          Length = 727

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 35/243 (14%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E++AK LLR + V V    ++ +V   +           V+K               
Sbjct: 503 NLFEFEAKTLLRAHGVDVPAEALVRNVDELDEVAARFGDRPLVMKVV---------SKDI 553

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV++        + +RE     + +       + +  V +   A    E+ + 
Sbjct: 554 LHKSDAGGVKLNLHG---RAALREAFDQIIGSCHAYKPAADIKGVLITPMARKGIEVIIG 610

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D   G    +    GG+ +E +     + I          ++     S+ + +    
Sbjct: 611 VSRDPIFG-PVLMFGL-GGIFVEILEDVAFRAIP---------LSRYAARSMVEQIRARR 659

Query: 178 ------ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                       +    DL   +         ++ L++NP+I+ ++G   V D+++  + 
Sbjct: 660 ILQGARGEAAVDKEALVDLLLKVSSIVAAYPQLAELDLNPVILYEDGYAIV-DARVIVNQ 718

Query: 231 NAL 233
             L
Sbjct: 719 TVL 721


>gi|186472044|ref|YP_001859386.1| CoA-binding domain-containing protein [Burkholderia phymatum
           STM815]
 gi|184194376|gb|ACC72340.1| CoA-binding domain protein [Burkholderia phymatum STM815]
          Length = 718

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 77/226 (34%), Gaps = 23/226 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E ++KA L  + + V +  + ++   A SA K L  P+ V+K                  
Sbjct: 489 ERESKAFLADHGIAVTREQLATNADDAASAAKRLGFPV-VLKID--------SEDIPHKT 539

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +  G V   +S   V +   +++      ++  P    +N   V+   D   E  + +  
Sbjct: 540 EVGGVVLNLASEAEVATAFDDLIARV---RKHMPQAH-INGALVQQQIDKGIEAIVGIAT 595

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
            +  G    + S  GG+ +E V             D    +    +A L           
Sbjct: 596 HKPFGPGVLVGS--GGVLVELVKDATFDIAPVTTRDASSMIARTRLADLTRGFRGATPAD 653

Query: 184 RIDGGDLFPNLYKAFC----DKDMSLLEINPLIIMKNGR-LRVLDS 224
           R    +L   L +       + D   L  NP+ +   G+   VLD+
Sbjct: 654 REALAELVSRLSEVAIVYADELDAMDL--NPVSVQPIGKGAIVLDA 697


>gi|222100298|ref|YP_002534866.1| Phosphoribosylamine--glycine ligase [Thermotoga neapolitana DSM
           4359]
 gi|221572688|gb|ACM23500.1| Phosphoribosylamine--glycine ligase [Thermotoga neapolitana DSM
           4359]
          Length = 400

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 15/91 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  A+  V  +    +  IK    P YV+K+   A  RGK           
Sbjct: 98  AKRFMKKYGIRTARFEVAETPEELKEKIKKF-SPPYVIKADGLA--RGK----------- 143

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGP 98
            GV +  S +  I    +++   LI    GP
Sbjct: 144 -GVLILDSEEEAIEKGSKLITGELIKGVKGP 173


>gi|86748496|ref|YP_484992.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2]
 gi|86571524|gb|ABD06081.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris HaA2]
          Length = 907

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 68/394 (17%), Positives = 118/394 (29%), Gaps = 66/394 (16%)

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           V K    AG RG      + A+   G     S     +      G  LI       G   
Sbjct: 82  VAKIITEAGERGVAGAIIISAEMGRGQ---GSYADAANRAARKSGIRLI-------GPNC 131

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI--------- 154
             + V  G+++      S            + S  G +    V     + I         
Sbjct: 132 LGIMV-PGSNLNA----SFAAHMPRRGHLALISQSGAIAAGMVDWAAVKNIGFSGIVSIG 186

Query: 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA------FCDKDMSLLEI 208
            +L +D    +           + L  +A  D          A         K   +   
Sbjct: 187 DQLDVDIADMLDYYAGDIETRAILLYIEAVTDARKFMSAARAAARVKPVVVVKSGRMAHG 246

Query: 209 NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
                   G L   D+       A +R   +  + D+ E       A+            
Sbjct: 247 ALAAATHTGALAGADAVYG----AAFRRAGMLRVFDLRELFDC---AETLGRVSAPRGKR 299

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDK 307
           +  + NG G+ +  +D +   GG PA                     N +D+ G AD ++
Sbjct: 300 VAILTNGGGIGVLAVDRLAELGGIPATLSKAVCDKLDAVLPPTWSGSNPIDITGDADAER 359

Query: 308 VAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKIN----IPLVMRLEGA 362
            A A  I+ +D     IL+ N+   +     + K ++  V E ++      P+     GA
Sbjct: 360 YAVALSILLADPENDAILVMNVQTAMASSAEIAKAVIRVVGEERVRRSFFKPVFAVWVGA 419

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +  +     A S   +      DDA + I++ V+
Sbjct: 420 DDAVTKAFDAAS---IPNYPTEDDAVRSIINLVR 450


>gi|82702800|ref|YP_412366.1| GCN5-related N-acetyltransferase [Nitrosospira multiformis ATCC
           25196]
 gi|82410865|gb|ABB74974.1| GCN5-related N-acetyltransferase [Nitrosospira multiformis ATCC
           25196]
          Length = 889

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 34/234 (14%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KA+L  +++PVA  ++  S   A    + L  P+ +                      
Sbjct: 491 ESKAVLAAFHIPVAPTMLARSPAEALLIAQQLGFPVVM----------KINSPDITHKTD 540

Query: 67  KGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            GGV +   +   V +  +++L +    ++  P       V +E        REL + + 
Sbjct: 541 VGGVLLNLKNAHEVRAAYQDMLDTV---REKRPEAHL-EGVSIEPMIRKANGRELMVGVT 596

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDMLE-- 178
            D  +          GG D+E   +  P     + + PL    S ++   A++  +L   
Sbjct: 597 SD-PAFGPVITFGP-GGTDVE--IRSTPA----IALPPLNKFLSRELIREANIARLLGAF 648

Query: 179 --LQGQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISFD 229
             +         D+   + +  C+      ++INPLI+ + G L   D++I  +
Sbjct: 649 RQMSPANLGALEDVLLRVSEMVCELPFLKEMDINPLILDEAGAL-AADARIIVE 701


>gi|47569944|ref|ZP_00240609.1| phosphoribosylamine--glycine ligase [Bacillus cereus G9241]
 gi|47553390|gb|EAL11776.1| phosphoribosylamine--glycine ligase [Bacillus cereus G9241]
          Length = 423

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KYN+P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYNIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +   +E+L       Q    G     V +E+  D  +E  L   V+  +
Sbjct: 152 GVTVAMTLEEALQATKEML-------QDVKFGEASKKVVIEEFLD-GQEFSLMAFVNGKT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VYPMVIA 210


>gi|228937578|ref|ZP_04100216.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970465|ref|ZP_04131116.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977035|ref|ZP_04137438.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis Bt407]
 gi|228782652|gb|EEM30827.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis Bt407]
 gi|228789197|gb|EEM37125.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822059|gb|EEM68049.1| Phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938072|gb|AEA13968.1| phosphoribosylamine--glycine ligase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 423

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G+    + +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QDVKFGAASKKIVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMVIA 210


>gi|126460460|ref|YP_001056738.1| ATP-grasp domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126250181|gb|ABO09272.1| ATP-grasp domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 232

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 23/230 (10%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
            + E +A  LLR Y +P     +  S   A +A + +  P+   VV  QI          
Sbjct: 16  KLREDEALELLRHYGIPTPDFALAHSEEEAVAAAEKIGYPVALKVVSPQIV--------- 66

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                D  G V   ++   V    R+I     ITK        +  V V+       EL 
Sbjct: 67  --HKTDVGGVVLNVTTPDGVREACRKI---KAITKTVPYA--EIEGVLVQKMVPKGVELI 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +  L D   G V       GG+  E       +       D    V       L      
Sbjct: 120 VGALYDEIFGHVILFG--LGGIYTELYKDVSMRLAPLDEQDAWDMVKEVKAYKLLTGFRG 177

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKI 226
              +      D+     +   +  +++  ++NP+I ++ G+   V+D++I
Sbjct: 178 TPPRDIPAVVDVIVKFSRLLEENPEITEADLNPVIALEEGKGAYVVDARI 227


>gi|41352993|gb|AAS01118.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 15/109 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T     +G
Sbjct: 1   WTMVAGGGASVVYSDTVADLGAVKELANYGEYSGNPTRAETREYVKTVFDLMTRSRHPQG 60

Query: 324 ILINIFGG-IMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGAN 363
             I I GG I     +    +GI+ A+KE      ++ + + +R  G N
Sbjct: 61  DKILIIGGAIANFTDVAKTFEGIIDAMKEYADKLKEVGVKIYVRRGGPN 109


>gi|238020042|ref|ZP_04600468.1| hypothetical protein VEIDISOL_01919 [Veillonella dispar ATCC 17748]
 gi|237863566|gb|EEP64856.1| hypothetical protein VEIDISOL_01919 [Veillonella dispar ATCC 17748]
          Length = 420

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V   V  A+  I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFHKVDEAKEFISQTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + + ++L       + G  G   + V +E+  +      L+ + D  
Sbjct: 152 -GVVVAMTIDEANAAVEDML----SGNRFGEAG---STVVIEEFMEGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|73538383|ref|YP_298750.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72121720|gb|AAZ63906.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 715

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 88/232 (37%), Gaps = 33/232 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKE 61
           + E +AK +L  Y VPV    + +S   A  A +T   P+ V+K +  A   + +     
Sbjct: 498 LTEREAKDVLAAYGVPVVGEALATSEQDAVRAAQTCGYPV-VLKVESPAIPHKSEAGVIR 556

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L   +   V      + V+++ R++            T  R+N V V+       E+ + 
Sbjct: 557 LGLKNADEVAAAW--RDVMANARKV-----------TTDDRINGVLVQSQVPAGVEILVG 603

Query: 122 LLVDRTSGMVAFIASTQGGMDIE----EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             VD   G +  +    GG+ +E     VA   P    K           E +  +  + 
Sbjct: 604 ARVDPHLGPLLIVG--LGGVMVELMQDTVAAMAPVSAQKARD------MLEQLRGVALLK 655

Query: 178 ELQGQA---RIDGGDLFPNLYK-AFCDKDM-SLLEINPLIIMKNGRLRVLDS 224
             +G A        ++   L + A   +D     ++NPLI   + R+  +D+
Sbjct: 656 GFRGAAGVDIARLAEVIAALSEFAHDQRDAIEEFDVNPLICTAD-RIVAVDA 706


>gi|253579875|ref|ZP_04857143.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848874|gb|EES76836.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 1071

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 61/204 (29%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P  KG  + +   A+ A   L  P+ V  S +  G                G
Sbjct: 676 EILEKCEIPRPKGQTVFTAEEAKKAANELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +R+  S + V   I    +I     I       G  +    V DG DI   L   ++   
Sbjct: 721 MRIAVSDEDVEEYIGVINQIAQEHPILVDKYLMGKEIEVDAVCDGEDI---LIPGIMEHI 777

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               +        G  I         +  K  I       +E    L   L + G   I 
Sbjct: 778 ERAGI------HSGDSISVYPAKTISEKAKETI-------AEYTRRLARALHVIGMINIQ 824

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                          D+ ++E+NP
Sbjct: 825 F---------IVLGDDVYVIEVNP 839


>gi|170289742|ref|YP_001736558.1| hypothetical protein Kcr_0115 [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170173822|gb|ACB06875.1| conserved hypothetical protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 230

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 28/234 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
           ++ E++AK  +  Y +PV    +  S   A +  + +  P+   +V  Q+          
Sbjct: 17  SLLEHEAKYFISSYGIPVTNIRLAKSEEEAVNFSREIGFPVVLKIVSPQV---------- 66

Query: 60  KELPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             +     GGV+V   S + V    REI+ +             +  + V++ A    EL
Sbjct: 67  --VHKSDVGGVKVNLRSEEEVRKAYREIIENVKRNVPNAE----IEGILVQEFAPPGVEL 120

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            + LL D   G         GG+ +E       +       D    +       L     
Sbjct: 121 IIGLLRDPQFGPTVMFG--LGGVFVELFRDVSFRVAPLSEQDAESMIKEVKAYKLLT--G 176

Query: 179 LQGQARIDGGDLFPNLYKA----FCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            +G   +D   +   L +A      +++++ +++NP+I    G ++V+D++I  
Sbjct: 177 FRGMEPVDIEAIKDALIRAGRIGVENEEIAEMDLNPVIAYPKG-IKVVDARIIL 229


>gi|254417269|ref|ZP_05031013.1| acetyltransferase, GNAT family [Microcoleus chthonoplastes PCC
           7420]
 gi|196175922|gb|EDX70942.1| acetyltransferase, GNAT family [Microcoleus chthonoplastes PCC
           7420]
          Length = 913

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 28/236 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  YN+P+    V  +   A +   +L  P+ V+K                
Sbjct: 508 LTELESKQLLAAYNIPIVHTGVAKTEENAVNWANSLGYPV-VLK---------LFSETIT 557

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT---GSRVNCVYVEDGADILRELY 119
                GGV++  + +  +      + ST +T++ G     G  V    V    D   EL 
Sbjct: 558 HKTDVGGVQLNLTDEEAVRWAYNRIQST-VTEKVGAEHFLGVTVQQ-MVHQ--DGAYELI 613

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +  +VD   G V    S  GG  +E       + I    ++  +     +   +   L  
Sbjct: 614 IGSIVDPQFGPVLVFGS--GGQLVEVFKD---RAIALPPLNTTLARRMIEQTQIYKALKG 668

Query: 179 LQGQARIDGG---DLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
           ++G+  +D      +     +   ++  +  ++INPL    + RL  LD++I   D
Sbjct: 669 VRGRQAVDLAELEQIMVRFSQLVIEQRWIKEIDINPLQASSD-RLIALDARIILQD 723


>gi|303231535|ref|ZP_07318264.1| phosphoribosylamine--glycine ligase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513781|gb|EFL55794.1| phosphoribosylamine--glycine ligase [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 420

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V S+   A+  I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFSNADEAKQFIAKTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + + ++L       + G  G   + V +E+  +      L+ + D  
Sbjct: 152 -GVVVAMTVEEANAAVDDML----SGNRFGEAG---STVVIEEFMEGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|294101562|ref|YP_003553420.1| CoA-binding domain protein [Aminobacterium colombiense DSM 12261]
 gi|293616542|gb|ADE56696.1| CoA-binding domain protein [Aminobacterium colombiense DSM 12261]
          Length = 684

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 23/222 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY AK LL  +N+ + K  +  S+  A    +T+  P+ +     +   + + R   L  
Sbjct: 474 EYDAKRLLAFHNIDITKEYLCHSLEEAIETAETIGYPVALKVMSPNIVHKSEARIIALNL 533

Query: 65  DSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVY---VEDGADILRELYL 120
             +         + + +     L    L        G  V  +    +E    I R+   
Sbjct: 534 RGE---------EELRNAYGRTLEKARLANPAADIRGVLVQEMLEDGIECTVAIKRDTVF 584

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             ++    G +   A     M +  V ++    + +     L G +      L  +    
Sbjct: 585 GAVLSVGLGGIYASAVRDFVMRVAPVDEESAMAMIRE----LKGYS-----LLRGVWGRP 635

Query: 181 GQARIDGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRV 221
           G        +  +L + A  +  +  LEINP+ + K G + V
Sbjct: 636 GYDVAAFAKMVASLSRLACTETRLVQLEINPVFVKKKGAVVV 677


>gi|218895406|ref|YP_002443817.1| phosphoribosylamine--glycine ligase [Bacillus cereus G9842]
 gi|218543741|gb|ACK96135.1| phosphoribosylamine--glycine ligase [Bacillus cereus G9842]
          Length = 423

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++KY++P A     +    A   I+ +  P+ V+K+   A G+              
Sbjct: 107 KELMKKYDIPTAAYETFTDYEEAVQYIQKVGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +  ++E+L       Q    G     V +E+  D  +E  L   V+ T+
Sbjct: 152 GVTVAMTLEEALQAVKEML-------QYVKFGEASKKVVIEEFLD-GQEFSLMAFVNGTT 203

Query: 129 GMVAFIA 135
                IA
Sbjct: 204 VHPMGIA 210


>gi|94312844|ref|YP_586053.1| putative acetyl-CoA synthetase [Cupriavidus metallidurans CH34]
 gi|93356696|gb|ABF10784.1| putative acetyl-CoA synthetase [Cupriavidus metallidurans CH34]
          Length = 703

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 71/229 (31%), Gaps = 23/229 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  A ALL +  VPVA   +      A    +++  P+ V                 L
Sbjct: 494 LSEADAMALLLQAGVPVAPHGLARDADEAVRVAESIGYPVVV----------KLCSPDIL 543

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV +  S    +    E +     T +            V        E+ + +
Sbjct: 544 HKSDVGGVVLNLSDADAVRAAFERVRRAAGTARFDGA-------LVARMVRGWGEIMVGV 596

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQG 181
             D   G+VA      GG  +E   +                +T    A+L         
Sbjct: 597 RRDPVFGLVALAG--IGGTAVEIFRQMSFGLAPVSRERARAMLTQSRAAALCAGHRGHPP 654

Query: 182 QARIDGGDLFPNLYKA--FCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                  D+  N+ +A       +  LEINP I+  +G L   D+ I+ 
Sbjct: 655 LDLDAVADVIVNVSRAADAIGDRLDTLEINPFIVSADG-LVAADAVITL 702


>gi|254168094|ref|ZP_04874941.1| hypothetical protein ABOONEI_711 [Aciduliprofundum boonei T469]
 gi|197622860|gb|EDY35428.1| hypothetical protein ABOONEI_711 [Aciduliprofundum boonei T469]
          Length = 201

 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 85/227 (37%), Gaps = 29/227 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN  EY+AK LL+ Y + V +G +I+ +   ++    L  P+                 K
Sbjct: 1   MN--EYEAKLLLKDYGIKVPEGALINDLREIDN--LDLNYPVVA----------KIASEK 46

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L     GGV +  + K  + +  +IL     +            V VE+      E+ +
Sbjct: 47  ILHKSDVGGVILNINNKEELKEKVKILMEKFSSP-----------VLVEEMLSGGLEVIV 95

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  D T G         GG+  E       + I    +D    +       + +     
Sbjct: 96  GVTKDPTFGHAIMFG--LGGIFTEVFKDVTFRVIPISRLDAEFMLNEIKGRKILEGYRGV 153

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
             ++    +L   + K   +  D+  +++NP++  +N  + VLD+KI
Sbjct: 154 RVSKEAIIELLLKVSKFVEENADIEGMDLNPVLARENDCV-VLDAKI 199


>gi|295311890|gb|ADF97284.1| succinyl-CoA ligase [Litomosoides sigmodontis]
          Length = 41

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/41 (73%), Positives = 36/41 (87%)

Query: 273 VNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFK 313
           VNGAGLAMATMDIIKL+GG PANFLDVGG A  ++V+ +F+
Sbjct: 1   VNGAGLAMATMDIIKLHGGDPANFLDVGGSATAEQVSESFR 41


>gi|126738923|ref|ZP_01754619.1| predicted Acetyl-CoA synthetase [Roseobacter sp. SK209-2-6]
 gi|126720104|gb|EBA16811.1| predicted Acetyl-CoA synthetase [Roseobacter sp. SK209-2-6]
          Length = 714

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 83/229 (36%), Gaps = 19/229 (8%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +EY+AK LL  Y + V    +             L      +K               L 
Sbjct: 498 YEYEAKDLLATYGIKVPGQFLARCEDDLTQVSTALGDAPMAMKIV---------SQDILH 548

Query: 64  ADSKGGVRVESSLKSV-ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               GGV++  S +    +D REIL +     +     + V+ V +   A+   E+ + +
Sbjct: 549 KSDAGGVKLRVSGEPALRADYREILAN----ARAYNPDADVHGVLIAPMAEPGVEVIIGV 604

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
           + D   G    +    GG+ +E +     + +     D    V     + + D +     
Sbjct: 605 VHDPMFG-PVLMFGL-GGIFVEVMKDVSFRALPMSRADAQEMVEEIQSSKVLDGVRGGLP 662

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
             ++   DL   + +      ++  +++NP+I+  +G     D+++  +
Sbjct: 663 VDKLALVDLMMKVSQLALAHPEIKEIDLNPVILRSDGYDIA-DARMILN 710


>gi|41352989|gb|AAS01116.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYSDTVADLGAVKELANYGEYSGNPSRTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+ E      ++ + + +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYADKLKEVGVKIYVRRGGPNY 110


>gi|288919901|ref|ZP_06414224.1| CoA-binding domain protein [Frankia sp. EUN1f]
 gi|288348733|gb|EFC82987.1| CoA-binding domain protein [Frankia sp. EUN1f]
          Length = 742

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 22/228 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +K LL  Y +PV    + +S   A +    L  P+ +  +      +       +
Sbjct: 525 LNEVDSKQLLAAYGIPVVAERLTTSPDEAVATATELGFPVVLKIASADIAHKSDLGLVAV 584

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                  VR   +                 T +T    +R++ V V +   D + E+ L 
Sbjct: 585 GVRDAADVRAAYA-------------RLTSTARTAAPDARIDGVVVAEMVTDAVAEVILG 631

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLEL 179
            L  +            G     EV  D    +     D    V  ++  V  L      
Sbjct: 632 -LSHQPPFGPTITFGLGGVFT--EVFADVAFAVPPFDADRARAVIESTRGVRLLRGARGR 688

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                    +    L     D    + E  INP+++   GR +  +D+
Sbjct: 689 PAGDIDALVETIMRLQVLAVDVGDQIAELDINPVMVRPAGRGVVAVDA 736


>gi|284048613|ref|YP_003398952.1| phosphoribosylamine/glycine ligase [Acidaminococcus fermentans DSM
           20731]
 gi|283952834|gb|ADB47637.1| phosphoribosylamine/glycine ligase [Acidaminococcus fermentans DSM
           20731]
          Length = 427

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KY VP A   V  ++  A + ++    P+ V+K+   A G+             
Sbjct: 106 SKELMEKYGVPTAFFKVCDNLADARAFVEEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +    ++ + E++G+     + G  G   N V +E+  +      L+   D  
Sbjct: 152 -GVVVAMTRDEALAALDEMMGA----HKFGSAG---NRVVIEEFMEGEEASLLAFT-DGK 202

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 203 TIVPMLAA 210


>gi|74318042|ref|YP_315782.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
           25259]
 gi|74057537|gb|AAZ97977.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
           25259]
          Length = 892

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 32/236 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E ++KALL  + +P+A+ ++      A    + +  P+ +                  
Sbjct: 490 LNEVESKALLSAFRIPIAQTLIARDPMEAMLTAQQIGFPVAM----------KINSPDIT 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
                 GVR+  S    +       G  L   +     +R+  + +E        RE+ L
Sbjct: 540 HKSDVNGVRLGLSSGHAVRSA---FGEMLADVKRLRPEARLEGIVIEPMVTRPHAREVLL 596

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVA--SLCDML 177
            +  D        +    GG+D+E            + + PL   +T + +    +  +L
Sbjct: 597 GMTSD-PVLGPVIVF-GAGGVDVEAFQDRA------VTLPPLNTYLTRDLIRRTRVATLL 648

Query: 178 EL----QGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISF 228
                          ++   L +  C+   ++ L+INPL++ + G L  LD++I  
Sbjct: 649 GSFRNRPPVDMAALENVLLRLSEMVCELPWLAELDINPLLVDEGGAL-ALDARIVI 703



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 32/195 (16%)

Query: 212 IIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IG 270
           +    G L   D+      +AL R   +  +  + +  +       H    I   GN + 
Sbjct: 253 VQSHTGALVGSDAVF----DALVRRAGVVRVNTILQLFASARALATH----IQPSGNRLA 304

Query: 271 CMVNGAGLAMATMDIIKLYGGA----------------PA-----NFLDVGGGADQDKVA 309
            + NG G  +   D+    G                  PA     N LD+ G A  ++  
Sbjct: 305 IVTNGGGPGVMATDLAVDVGLRMAELSPATIAELDAVLPATWSRGNPLDIIGDATAERYR 364

Query: 310 AAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
           AA      D++V G+L+      + R   +   ++   K+    + L   +  A V  G 
Sbjct: 365 AAVGACLHDNNVDGVLVMLTPQAMTRPTAVADAVIDVAKQAPKPV-LTCWMGEAQVHEGR 423

Query: 369 RLIAESGLNVITAID 383
           +   ++G+   T  +
Sbjct: 424 QRFKQAGIPYFTTPE 438


>gi|319940829|ref|ZP_08015168.1| hypothetical protein HMPREF9464_00387 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805711|gb|EFW02492.1| hypothetical protein HMPREF9464_00387 [Sutterella wadsworthensis
           3_1_45B]
          Length = 869

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 82/264 (31%), Gaps = 35/264 (13%)

Query: 3   IHEYQAKALLRKYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +HE     L+R   + PV  G +  S+  A+ A + L  P+ +  S    G R       
Sbjct: 466 LHE-----LMRHLGLRPV-DGRITHSLEEAQQAARELGWPVAIKASSTALGSRSASGLVF 519

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELY 119
           L            +L S  +        T    +  P     + V VE  +     REL 
Sbjct: 520 L------------NLDSAEALADAWKELTTNWAENSPWSQP-DGVLVESMSQHAFERELR 566

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-- 177
           L + +D   G V       G      +  D    +  L  D    +           L  
Sbjct: 567 LGIRLDPVLGPVVEFG---GAGLASTLYNDLSVALAPLSQDEAESL--AHAPRYAQTLDA 621

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
              L      +  D    L            L + P++   NG L V+D+ ++  D  L 
Sbjct: 622 YRGLPPINWDELTDALGRLGDLAAALPALRSLRLEPVVPTDNG-LLVIDASVALYDAPLI 680

Query: 235 RHLDIQE--LRDVSEEDSREIEAK 256
              D     LR    ED  E  A+
Sbjct: 681 PRRDYPHLVLRPAPIEDQTEARAR 704


>gi|320335715|ref|YP_004172426.1| cyanophycin synthetase [Deinococcus maricopensis DSM 21211]
 gi|319757004|gb|ADV68761.1| cyanophycin synthetase [Deinococcus maricopensis DSM 21211]
          Length = 919

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  +PV +G V+ +   A  A K +  P+ V K      GRG       P   +G
Sbjct: 251 KTLLDRAGLPVPRGAVVRTAEEAVRAAKRVGYPV-VTKPLDGNHGRGVSMDLMTPEQVEG 309

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGAD 113
           G       +      R    + ++ +Q      RV     + V V +   
Sbjct: 310 G------FEEARQHSR----NVVVEQQYRGNDHRVLVVNGHVVAVAERVP 349


>gi|301064113|ref|ZP_07204560.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300441733|gb|EFK06051.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 222

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 82/229 (35%), Gaps = 23/229 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK +LR Y +PV   + +++    ++A   +  P  V+K        G       
Sbjct: 15  LSEYEAKQVLRAYQIPVTHEITVTNQADLKTAAAEIGFP-LVLK--------GCAPSITH 65

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       +++  +          + T   G      N V V++     REL   L
Sbjct: 66  KTGKGLIEVDIRNMEEALGA-----FDRISTNMDGKE----NEVLVQEMIKGQRELVAGL 116

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G    +    GG+  E +     +       D L  ++      + D +  +  
Sbjct: 117 TRDPQFG-PCVMFGL-GGIFTEVLRDISFRVAPLEKHDALEMMSEIKAHKILDAVRGMPE 174

Query: 182 QARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISFD 229
             R    D+  ++ +   + D    ++INPLI+  + R   +D+ I  +
Sbjct: 175 VDRDLLADILISVGRIGLENDAVKEIDINPLILSGS-RPVAVDALIILE 222


>gi|41352959|gb|AAS01101.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGAVKELANYGEYSGNPSRTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+ E      ++ +   +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYADKLKEVGVKTYVRRGGPNY 110


>gi|157930997|gb|ABW04213.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D +   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTVADMGYVNELANYGEYSGNPTRTETREYVKTVLDLMTRNKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVRIYVRRGGPN 110


>gi|91779088|ref|YP_554296.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400]
 gi|91691748|gb|ABE34946.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400]
          Length = 703

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 46/245 (18%)

Query: 2   NIHEYQAKALLRKYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ E+QAK L  ++ + PV +  V+++   AE+A  TL G + V+K  I +G        
Sbjct: 479 SLDEHQAKQLFSRFGIAPVEE-KVVTTAVQAEAAANTLGGAV-VLK--ILSGE------- 527

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  +   V S ++ +       +    TG       V+       E+ +
Sbjct: 528 ITHKTDVGGVAVNLTADQVSSRLQAM-----TVEVEQKTGVAPTRFLVQQMLSGGTEMIV 582

Query: 121 SLLVDRTSGMVAF----------------IASTQGGMDIEEVAKDYPQKIFKLLIDPLIG 164
            +  D     +                  + S +GG+  E+V +   +     ++    G
Sbjct: 583 GMHRDALGTAILLGMGGITAELFDDTSMRLLSGRGGLSREQVMEMLAELKTLRVLQGFRG 642

Query: 165 VTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPL-IIMKNGRLRVLD 223
               D+ +L         A +    +   L        +   EINPL ++ +   +R  D
Sbjct: 643 RPKADIEALV-------TAVVAFSTMVSQLGD-----RLMAAEINPLFVLPETQGVRAAD 690

Query: 224 SKISF 228
                
Sbjct: 691 GVAVL 695


>gi|282165588|ref|YP_003357973.1| acetyl-CoA synthetase [Methanocella paludicola SANAE]
 gi|282157902|dbj|BAI62990.1| acetyl-CoA synthetase [Methanocella paludicola SANAE]
          Length = 696

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 24/223 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L  Y +P  K  + +SV+ A  A + +  P+ +                 +     GGV+
Sbjct: 489 LEAYGIPTLKYRIATSVNDAMQAAREIGYPIVM----------KIVSPDIIHKSDVGGVK 538

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V  S    + +        +          R++ V ++  A   +E+ L +  D   G  
Sbjct: 539 VGISNDEELENA---YNKMMKDVTLAAPRCRISGVLIQQMATGGKEVILGMNKDPQFG-P 594

Query: 132 AFIASTQGGMDIEEVAKDYPQKI----FKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +    GG+ +E V KD   +I     K     + G+ +  +  L      +       
Sbjct: 595 LIMFGL-GGIYVE-VLKDVQFRIAPLNEKDAYGMIYGIKTHQM--LEGTRGEKPSDIEKL 650

Query: 188 GDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
            +    L +   D  D+  ++INP+ + + GR    LD +++ 
Sbjct: 651 VEFLERLSQLVTDFPDILEMDINPVKVYEKGRGCLALDVRLAI 693


>gi|124485110|ref|YP_001029726.1| carbamoyl phosphate synthase large subunit [Methanocorpusculum
           labreanum Z]
 gi|167006443|sp|A2SQ53|CARB_METLZ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|124362651|gb|ABN06459.1| carbamoyl-phosphate synthase large subunit [Methanocorpusculum
           labreanum Z]
          Length = 1053

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 43/213 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ K  +++ +   + A + +  P  +  +    G             + G
Sbjct: 131 KKLMLEIGEPIPKSFILTKIEQLDEAYEEVGLPAIIRPAYTLGG-------------AGG 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV   ++ + + + +             G T SRV+ V +E+      E+   ++  R +
Sbjct: 178 GV--ANTKEELRTIVE-----------HGLTKSRVHQVLIEESVKGWNEIEFEVM--RDA 222

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                I      +D   +     + +    I        G+       +   L +QG   
Sbjct: 223 ADTCIIICGMENVDP--MGVHTGESVVVAPILSLTSDEFGIMRRAAIKIIRALNVQGGCN 280

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I           AF + D  ++E+NP +   + 
Sbjct: 281 IQF---------AFNNGDYRVIEVNPRVSRSSA 304



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 43/186 (23%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL + N+P        S   A +    +  P+ V  S +  G                 +
Sbjct: 663 LLDQNNIPSPANGSAYSEKEAYAIANKIGYPVLVRPSYVLGG---------------RAM 707

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
            +      + + I+E +  +             + V ++   D   EL +  + D  +  
Sbjct: 708 ELVHDELELQTYIKEAVRVSNT-----------HPVLIDRYLDNATELDVDAVSDGET-- 754

Query: 131 VAFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQGQ 182
              I    G M+ IEE           +   P   +T E +         +   L + G 
Sbjct: 755 -VLIG---GVMEHIEEAGVHSGDSACVI---PTQTLTPEQIATVKDYTRKIALSLGVVGL 807

Query: 183 ARIDGG 188
             I   
Sbjct: 808 INIQYA 813


>gi|86607714|ref|YP_476476.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556256|gb|ABD01213.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 1082

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +++  + V +  +  ++  A+   + +  PL +  +    G             + G
Sbjct: 133 KQAMQRIGLAVPRSGLAHTLEEAKQIAQEIGYPLIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    + +                   G   S V+ + VE+     +E  L ++ D  +
Sbjct: 180 GV--AYNQEEFEEICAA-----------GLEASPVSQILVEESVIGWKEFELEVMRD-LA 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE +          + + P   +T ++   L D
Sbjct: 226 DNVVIICS------IENMDPMGVHTGDSITVAPAQTLTDKEYQRLRD 266



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 116/390 (29%), Gaps = 65/390 (16%)

Query: 10   ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
             +LR+ ++      +  SV  +    + +  P+ V  S +  G   +  + +        
Sbjct: 677  RILRELDIRQPANGIARSVEESLEIARRIGYPVVVRPSYVLGGRAMEIVYSDQDLQRYMQ 736

Query: 70   VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
            + V                                 V V+   +   E+ +  + DRT  
Sbjct: 737  LAVAVDPD--------------------------RPVLVDQFLEEAVEVDVDAIADRTG- 769

Query: 130  MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 A T GG+   IE+           L   P   ++ E +  + +   ++    +  
Sbjct: 770  -----AVTIGGILEHIEQAGIHSGDSACVL---PSRTLSPEVLRVIREWT-VKLAQALKV 820

Query: 188  GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH-LDIQELRDVS 246
              L    Y A     + +LE NP        +         D  A       ++EL    
Sbjct: 821  VGLINVQY-AVQKGQVYILEANPRASRTVPFVSKAIGHPLADYAAQVMSGKTLEELGFTQ 879

Query: 247  EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
            E     I  K+  L +    G    +          M I   +G                
Sbjct: 880  EVIPSHIAVKEAVLPFHKFPGTDTLLGPEMRSTGEVMGIDTDFG---------------R 924

Query: 307  KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDI 366
              A A      +  ++G +      I   D   + ++   +E    + L  RL     + 
Sbjct: 925  AYAKAQLAAGQNLPLQGTVF-----ISVSDRDKQAVIPVAREF---VGLGFRLLAT--EG 974

Query: 367  GNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
              +++AE G+ V   + L +    ++ A+K
Sbjct: 975  TQKVLAEHGIPVDKVLKLHEGRPHVIDAIK 1004


>gi|315230936|ref|YP_004071372.1| succinyl-CoA ligase subunit beta [Thermococcus barophilus MP]
 gi|315183964|gb|ADT84149.1| archaeal succinyl-CoA ligase (ADP-forming), beta chain
           [Thermococcus barophilus MP]
          Length = 235

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 77/233 (33%), Gaps = 29/233 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK---SQIHAGGRGKGRFKE 61
           EY+AK +L+ Y +PV    +  ++  A    K +  P+ V+K    QI      K     
Sbjct: 22  EYEAKQVLKAYELPVPDEKLAKTLDEALEYAKEIGYPV-VLKLMSPQILHKSDAKIIALN 80

Query: 62  LPADSKGGVRVESSLKSVISDI--REILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           +  + +   + E   ++        EILG                 V V       RE+ 
Sbjct: 81  IKNEEELKKKWEEIHENAKKYRPDAEILG-----------------VLVAPMLKPGREVI 123

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLE 178
           + +  D   G         GG+ +E +     + I     D    + S     +      
Sbjct: 124 IGVTEDPQFGHAIMFG--LGGIFVEILKDVTFRIIPIEEKDAWAMIKSIKGYPILAGARG 181

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
                     D+   + K   D    + E+  NP+ +   G    V+D++I  
Sbjct: 182 EPPADMKALVDMMLKVSKLVDDLKDYIKEMDLNPVFVYNEGEGAVVVDARIIL 234


>gi|41352981|gb|AAS01112.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 15/109 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T     +G
Sbjct: 1   WTMVAGGGASVGYSDTVADLGAVKELANYGEYSGNPTRAETREYVKTVFDLMTRSRHPQG 60

Query: 324 ILINIFGG-IMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGAN 363
             I I GG I     +    +GI+ A+KE      ++ + + +R  G N
Sbjct: 61  DKILIIGGAIANFTDVAKTFEGIIDAMKEYADKLKEVGVKIYVRRGGPN 109


>gi|307596480|ref|YP_003902797.1| ATP-grasp domain-containing protein [Vulcanisaeta distributa DSM
           14429]
 gi|307551681|gb|ADN51746.1| ATP-grasp domain protein [Vulcanisaeta distributa DSM 14429]
          Length = 237

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 87/239 (36%), Gaps = 36/239 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E+++  LLR+YN+PV    ++  V+ A   +K +  P+ V+K               
Sbjct: 20  KLLEHESFELLRQYNIPVPDFALVQDVNDALKVVKDIGYPV-VLKVV---------SPDI 69

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           +     GGV +  S    +    E + S +  K       R++   V+       E  + 
Sbjct: 70  IHKSDVGGVILNISNDDELRSACERIRSNIKEKAPYA---RISGFLVQRMVPEGLETIIG 126

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE--- 178
              D   G    IA   GG+ +E +     + +          +T ED  ++   ++   
Sbjct: 127 ATKDPIFGH--VIAFGLGGVMVEVLQDVSFRIVP---------ITEEDARAMVREIKGYR 175

Query: 179 -------LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                  +  +       +     +   D  ++   ++NP+I+++ G+     D++   
Sbjct: 176 LFNGYRNMPVRDEEAVIYIITKFSELLSDNPNIVEADLNPVIVLERGKGAYAADARFII 234


>gi|237752815|ref|ZP_04583295.1| carbamoyl-phosphate synthase subunit large [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376304|gb|EEO26395.1| carbamoyl-phosphate synthase subunit large [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 1089

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + K     ++  A  A K +  PL +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKSRYAYTLEEALEAAKEIGFPLIIRASYTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++    +             Q G   S +N + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIDEFKALA-----------QNGLEVSPINEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R    +           IE +          + I P + +T ++   + D 
Sbjct: 222 RVDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 265


>gi|218884240|ref|YP_002428622.1| AcdB acetate--coA ligase (ADP-forming), beta chain [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765856|gb|ACL11255.1| AcdB acetate--coA ligase (ADP-forming), beta chain [Desulfurococcus
           kamchatkensis 1221n]
          Length = 232

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 82/230 (35%), Gaps = 20/230 (8%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A  +++ Y +P  + VV+ S   A      +  P+ +                 
Sbjct: 17  KLLEHEAFQIIKYYGIPSPEVVVVKSPAEAVELADKIGYPIAL----------KIVSPDI 66

Query: 62  LPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 GGV++   S + V   + E+L     T       +R+  V + + A    E+ +
Sbjct: 67  THKSDVGGVKLGLKSREEVGKAVEEMLR----TVSLKAPNARLVGVLMYNMAPQGLEVIV 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
             + D   G    +    GG+ +E +     +       D L  +     + + +     
Sbjct: 123 GGVRDGIFG-PVIMFGL-GGIFVEVLKDVSFRIAPITRNDALGMLNEIKSSKILEGYRGQ 180

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
               +    D+     +   +  ++  +++NP++    G +  +D++I  
Sbjct: 181 PPVDKEAIADIIVKTARLMEENPEIESIDLNPVMAYPKGAI-AVDARIIL 229


>gi|212224464|ref|YP_002307700.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus
           onnurineus NA1]
 gi|212009421|gb|ACJ16803.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus
           onnurineus NA1]
          Length = 459

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 28/158 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  M N  G  + T D I   G   AN                      +D+   A  +
Sbjct: 296 RVAIMTNAGGPGVLTADEIDKRGLKLANLEEKTMGGLRSFLPPMAAVKNPVDMIASARGE 355

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEG 361
                 K++  D +V  +    ++  F G+   +   +G++ AVKEV    P++ + + G
Sbjct: 356 DYYRTAKLLLEDPNVDMLIAICVVPTFAGMTPTEH-AEGVVRAVKEVNNGKPVLGLFMAG 414

Query: 362 ANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
              +    ++ ++G+       D+  AA  +V   K V
Sbjct: 415 YISEPAKEVLEKAGIPSYERPEDVASAAYALVEFAKDV 452


>gi|41352979|gb|AAS01111.1| AclB [uncultured prokaryote]
 gi|41352999|gb|AAS01121.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGAVKELANYGEYSGNPSRTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+ E      ++ + + +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYADKLKEVGVKIYVRRGGPNY 110


>gi|41353055|gb|AAS01149.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   FK++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGXVNELANYGEYSGNPSRTETREYVKTVFKLMTRNKDPQG 60

Query: 324 I--LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
              ++ I G I     + K   GI+ A+KE      ++ + + +R  G N
Sbjct: 61  RPKILIIGGAIANFTDVAKTFDGIIDAMKEYADKLREVGVKIYVRRGGPN 110


>gi|20804025|emb|CAD31602.1| PUTATIVE LIGASE/CARBOXYLASE PROTEIN [Mesorhizobium loti R7A]
          Length = 411

 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 86/266 (32%), Gaps = 55/266 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VP+    + ++    ES    +  P+ V+K  + +G                
Sbjct: 118 RQLLSEAGVPIPAYRLAANATEVESCAAEIGLPV-VLKPAVGSG--------------SI 162

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GVR+  S++ V      +L     T Q+ P       + VE+ A      Y +L++    
Sbjct: 163 GVRLCRSVEEVAEHTTYLLDGK-HTWQSSP------KILVEEFA--QGPYYCTLVMGNEV 213

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-------MLELQG 181
                I +   G          P  +F   I P   VT ++   + D        L L  
Sbjct: 214 LG---IGAADFGP--------LPHFVFLRSIFPAP-VTDDEHRRIADVSLSCLRALGLGW 261

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
                           +  +   ++E+NP ++   G      +    D    +  L I +
Sbjct: 262 GPTNIELR--------WTRRGPVVIEVNPRLVGGTGPRLAQAAH-GIDLVTEHIKLVIGD 312

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDG 267
             D+    S    A+      +  DG
Sbjct: 313 EWDLRRRHSHIAAAR---FLLVDRDG 335


>gi|292655160|ref|YP_003535057.1| acetyl-CoA synthetase [Haloferax volcanii DS2]
 gi|291372641|gb|ADE04868.1| acetyl-CoA synthetase [Haloferax volcanii DS2]
          Length = 697

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 77/231 (33%), Gaps = 21/231 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +    G ++     A    + + G + +                 L    
Sbjct: 484 EAMELLDAYGIETPAGDIVDDPADALEVAEDIDGNVVM----------KIVSPDILHKSD 533

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV+V    + V     ++    +   +     + +  V V++  ++   +   + ++R
Sbjct: 534 IGGVKVGVENEDVYDAYEDL----ITRAKNYQPDANILGVQVQEMVNLDDGVETIVGMNR 589

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIF---KLLIDPLIGVTSEDVASLCDMLELQGQA 183
                  +    GG+ +E +     +          D    + +     L          
Sbjct: 590 DPQFGPLMMFGLGGIFVEILEDTTFRVAPVSETEAEDMTKEIDA--APMLRGARGNDPVD 647

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNAL 233
                +    L +   D    L L+INPL+ + +G ++ +D +++ D + L
Sbjct: 648 IGGITETIQRLSQLVTDFPAILELDINPLVALPDG-VKAVDVRLTVDPDEL 697


>gi|282858018|ref|ZP_06267219.1| phosphoribosylamine--glycine ligase [Pyramidobacter piscolens
           W5455]
 gi|282584172|gb|EFB89539.1| phosphoribosylamine--glycine ligase [Pyramidobacter piscolens
           W5455]
          Length = 347

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A   V  ++  AE A+    GP Y+VK+   A G+             
Sbjct: 21  SKNFMARHRIPTADFYVCRTMDEAEKALSHFSGP-YIVKASGLAAGK------------- 66

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV VE +L       R++L    + K+ G  G     + +E+     REL L ++ D  
Sbjct: 67  -GVFVEPTLDGAREAARQML----VGKKLGAAG---ETLVIEEALP-GRELSLMVVTDGA 117

Query: 128 SGMVA 132
           +  + 
Sbjct: 118 AYRLL 122


>gi|256376047|ref|YP_003099707.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827]
 gi|255920350|gb|ACU35861.1| CoA-binding domain protein [Actinosynnema mirum DSM 43827]
          Length = 852

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 84/226 (37%), Gaps = 24/226 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q   LL  + +P+  GV+ S V  A +A K+   P+ +         + K    +L    
Sbjct: 637 QVVRLLSAFGLPILGGVLASDVEGAVAAQKSFGQPIAMKAVARGVLHKSKAGGVKLNLG- 695

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                   + + V  +          T      G R+  V+V+  A+  REL + ++ D+
Sbjct: 696 --------TPERVAEE---------FTGMQERFGDRLQGVFVQPMAESGRELLVGVVSDQ 738

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             G +       GG+D + +             D    +     ++     +   +   D
Sbjct: 739 RFGPLVVTG--LGGVDTDLLDDRAAALAPLTSADVDDLLRGFRASAKVFE-QHPEEPVHD 795

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                  L +   +  ++ L++NPL++ K  R+  +D+++  +  A
Sbjct: 796 VLLRVSRLAEMVPE--IAELDLNPLVV-KGERVIAVDARVRLEPVA 838


>gi|312114586|ref|YP_004012182.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219715|gb|ADP71083.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 887

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 78/245 (31%), Gaps = 33/245 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  ++ LL  Y +P  + +++ +   A +  + +  P+ +                  
Sbjct: 482 LSEPDSRRLLASYGIPTLESILVGTADEAAAVAERIGYPVAL----------TLSSPDLP 531

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                G V +   +  +V S    I+     +  +    G  +  + V       R+L +
Sbjct: 532 RKWDAGAVALNLENADAVRSAAEGIMRRVRDVAPEVRIEGFALQRMVV---WPHSRQLMM 588

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK------IFKLLIDPLIGVTSEDVASLC 174
            +  D   G V      +GG  +E V             + + +ID        +   L 
Sbjct: 589 GISCDPLFGPVLVFG--EGGRAVELVRDHTVALPPLNLPLARQMIDRTRISRRFEAHGLR 646

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF---DD 230
                    R         L     D  +++  +INPL     G +  +D++I     DD
Sbjct: 647 -----PEANRDAIAQALVRLSALLVDNPEITACDINPLFANHQG-VVAVDARIQLVAPDD 700

Query: 231 NALYR 235
               R
Sbjct: 701 TDRRR 705



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG--GIMRCDVLVKGILSAVK 347
           G  PAN +D+G GA  D   AA K+++    V GILI I     +     + + ++ A K
Sbjct: 337 GRRPANPVDLGAGASADDYTAALKVLSEALEVDGILI-IHAPNAMTDSSEIARAVVEAQK 395

Query: 348 EVKINIPLVMRLEGANVDIGNRLIAESGL 376
             +  + L   L G        L AE+GL
Sbjct: 396 RYRSGV-LACWLGGETASAALALFAEAGL 423


>gi|16554478|ref|NP_444202.1| Acetyl-CoA synthetase [Halobacterium sp. NRC-1]
 gi|169235787|ref|YP_001688987.1| acyl-CoA synthetase ( acetate--CoA ligase (ADP-forming))
           [Halobacterium salinarum R1]
 gi|167726853|emb|CAP13639.1| acyl-CoA synthetase (homolog to acetate--CoA ligase (ADP-forming))
           [Halobacterium salinarum R1]
          Length = 700

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 21/231 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P   G V+ S  AA    + + G + +                 L    
Sbjct: 487 EAMDLLDAYGIPTPTGDVVDSPDAARRVARDIEGDVVM----------KIVSPDILHKSD 536

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            GGV+V     +V     ++    +         + +  + V++  D+    E  L +  
Sbjct: 537 IGGVKVGVETDAVADAYEDL----ITRATNYQPDATILGIQVQEMVDVDAGTETILGMNR 592

Query: 125 DRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G +         ++I E+ +        +   D +  + S  +             
Sbjct: 593 DPQFGPLLLFGLGGIFVEILEDTSVRVAPVSEREAGDMIDDLDSAPLLRGAR--GRDPAD 650

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNAL 233
                +    L +   D    L L++NPL+   +     LD +++ D + L
Sbjct: 651 EAAITEAIQRLSQLVTDFPAILELDVNPLLATGD-SATALDVQLTIDPDEL 700


>gi|308273328|emb|CBX29931.1| hypothetical protein N47_F16260 [uncultured Desulfobacterium sp.]
          Length = 899

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 39/239 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E +AK+LL  Y +PV +  +      A    + L  P+ +                 +
Sbjct: 492 LNEVEAKSLLLSYGIPVNRTEIACCAEEAVQKAQQLGFPVAM----------KICSRDVV 541

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYL 120
              S  G+R++ +S+  V     +IL S L  K       +++ V ++        EL L
Sbjct: 542 HKTSVNGIRLDLNSVSDVEKSYEDILASCLSCKPKA----KIDGVTIQPMLKRPDFELIL 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  DR  G V       GG+  E +     + I    ++ L+         L +  ++ 
Sbjct: 598 GIKKDREFGPVILFG--MGGVMTEILKD---RAIAFPPLNRLL------ARRLMEETKVY 646

Query: 181 GQARIDGG----------DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              +              ++   L +   D  ++  L+INPLI+  +  +  LD+++  
Sbjct: 647 RILKGQAAHNSTDLYLIEEILIRLAQLAADFPEIEELDINPLILT-DNSVCALDARVVI 704



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 34/184 (18%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F    + R    +EL D +E  ++        L           + N  GL +  +D + 
Sbjct: 273 FKRAGIVRVKTFEELFDCAELLAKNPHPSGPGL---------AIITNAGGLGVMAVDALS 323

Query: 288 LYGGAP---------------------ANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
            YG  P                     +N +D+ G AD ++     KI      + G+L+
Sbjct: 324 DYGIEPVALSAETIKKLDKELPSYWSHSNPIDLIGDADHERYLNTVKICIEAPEINGLLV 383

Query: 327 NIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD 385
            +   G+     + K +   +K     +     L G  V+ G + + ++ +   T    +
Sbjct: 384 ILVPQGLNDPANIAKILADFLKNHPFPV-FTSWLGGPGVEKGRQFLNDALIP--TFDTPE 440

Query: 386 DAAQ 389
            A +
Sbjct: 441 RAVR 444


>gi|294794974|ref|ZP_06760109.1| phosphoribosylamine--glycine ligase [Veillonella sp. 3_1_44]
 gi|294454336|gb|EFG22710.1| phosphoribosylamine--glycine ligase [Veillonella sp. 3_1_44]
          Length = 420

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V   V  A++ I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFHKVDEAKAFIAQTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + + ++L       + G  G   + V +E+  +      L+ + D  
Sbjct: 152 -GVVVAMTIDEANAAVEDML----SGNRFGDAG---STVVIEEFMEGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|256390296|ref|YP_003111860.1| carbamoyl-phosphate synthase L chain ATP- binding [Catenulispora
           acidiphila DSM 44928]
 gi|256356522|gb|ACU70019.1| Carbamoyl-phosphate synthase L chain ATP- binding [Catenulispora
           acidiphila DSM 44928]
          Length = 459

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 24/124 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ +  +PV  G    ++ +  A    + +  P  ++K+    GGRG          
Sbjct: 119 ARRLMAEAGLPVLPGSTGAVNGLAEARKVAERIGYP-LILKAVAGGGGRGIAVV------ 171

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +   ++  + +   +  R + G                 +Y+E   +  R + + +L D
Sbjct: 172 -RAADQLTQAYRETCAHARAVFGD--------------ERLYIERFVEDARHIEVQVLCD 216

Query: 126 RTSG 129
           R  G
Sbjct: 217 RHGG 220


>gi|295401721|ref|ZP_06811687.1| phosphoribosylamine/glycine ligase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976208|gb|EFG51820.1| phosphoribosylamine/glycine ligase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 430

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++KY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKEMMKKYGIPTAEHAAFTSYEEAKAYVEKKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L   +      L   ++ K+ G  G     V VE+  +   E  L   V   
Sbjct: 152 -GVTVAATLPEAMEA----LRMMMVEKRFGAAG---ERVVVEEYLE-GEEFSLMAFVHGE 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 RVYPMVIA 210


>gi|242280507|ref|YP_002992636.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242123401|gb|ACS81097.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 708

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 90/234 (38%), Gaps = 29/234 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+QA+ ++  Y +P  +  +  S   A +  + L  P+ V+K             +    
Sbjct: 483 EFQARDIVTAYGLPTPESDLARSGDEAVAIAEQLGYPV-VLKI---------ASPEISHK 532

Query: 65  DSKGGVRVESS-LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
               GVRV  +  + V +   +I   T  T++  P      C+  +  +   RE+ +   
Sbjct: 533 SDVDGVRVGLNCAEEVRAAFWDI---TARTQRLRPDVFIAGCLVQQMASPQSREVIVGFR 589

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D+  G    +    GG+ +E + KD   ++  L ++       E V  +   + L+G  
Sbjct: 590 RDKQFG-PLLMFGL-GGVYVE-ILKDISFRLAPLSVEEA----GEMVREIRSYMLLKGVK 642

Query: 184 ------RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                      D+   +     D  ++   E NP+++  +  L   D++++  D
Sbjct: 643 GGEPVDFEAITDVLIRMSCLADDFPEIYEAEFNPVLVNSDEALVA-DARMTVVD 695



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 72/190 (37%), Gaps = 36/190 (18%)

Query: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII--- 286
            +A +R   +  +  + E  +    AK  ++  + L  N+G + N  G  +   D     
Sbjct: 262 CDAAFRQSGVIRVEKLDELFN---LAKAFSVQELPLGPNLGIVTNAGGPGILAADACGES 318

Query: 287 -------------KLYGGAPA-----NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
                        +L    P      N +D+ G AD +    A +I+  D +V  +L+ I
Sbjct: 319 VMRMPTFSPGTIGELQRMLPGYASLYNPVDLLGDADAESYGRAVRIVGHDPAVNSLLV-I 377

Query: 329 FGGIMRCD--VLVKGILSAVKEVKINIPLVMRLEG-ANVDIGNRLIAESGLNVITAIDLD 385
               +  D   + K ++  + E  ++ P+   L G  N      + AE+G+ V       
Sbjct: 378 IAPTVNLDFTEVAKAVVQGMGE--VSKPVFCCLMGRKNSAEAREIFAEAGVPVYDFP--- 432

Query: 386 DAAQKIVHAV 395
              ++ V A+
Sbjct: 433 ---KQAVRAM 439


>gi|147920257|ref|YP_685976.1| carbamoyl phosphate synthase large subunit [uncultured methanogenic
           archaeon RC-I]
 gi|110621372|emb|CAJ36650.1| carbamoyl-phosphate synthase, large subunit [uncultured
           methanogenic archaeon RC-I]
          Length = 1080

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 68/216 (31%), Gaps = 49/216 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +      V + +   SV  A  A++TL  P+ +  +    G                
Sbjct: 133 KHAMESIGEKVPRSIPCHSVEEAVKAVETLGLPMIIRSAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +++ V                 G   SR++ + VE+     +E    ++  R +
Sbjct: 178 GSGVARTIEEVRQIAE-----------IGIKRSRIHQILVEESILGWKEFEYEVM--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                       +D   +     + I   ++ P   ++  D          +   L ++G
Sbjct: 225 SDTCITICNMENVDP--MGIHTGESI---VVTPSQTLSDADHQKLRTAAIKIIRALGIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I           A+ D D  ++E+NP +   + 
Sbjct: 280 GCNIQF---------AWKDGDYRIVEVNPRVSRSSA 306



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            L+++  +   +  +  S+  A++  + +  P+ V  S +  G
Sbjct: 674 RLMKEQGILQPESGIAYSIDDAKAVARRIGFPILVRPSYVLGG 716


>gi|254167947|ref|ZP_04874795.1| hypothetical protein ABOONEI_94 [Aciduliprofundum boonei T469]
 gi|289595995|ref|YP_003482691.1| acetyl-CoA synthetase (ADP forming), beta chain (AcdB)
           [Aciduliprofundum boonei T469]
 gi|197622990|gb|EDY35557.1| hypothetical protein ABOONEI_94 [Aciduliprofundum boonei T469]
 gi|289533782|gb|ADD08129.1| acetyl-CoA synthetase (ADP forming), beta chain (AcdB)
           [Aciduliprofundum boonei T469]
          Length = 201

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 87/227 (38%), Gaps = 29/227 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN  EY+AK LL+ Y + V +G +I+ +    +    L  P+    +      +      
Sbjct: 1   MN--EYEAKLLLKDYGIKVPEGALINDLREIYN--LDLNYPVVAKVASEKILHK------ 50

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D  G +    + + +   ++      L+ K + P       V VE+      E+ +
Sbjct: 51  ---SDVGGVILNIKNKEELKEKVK-----ILMEKFSSP-------VLVEEMLSGGLEVIV 95

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            +  D T G         GG+  E       + I    +D  + +       + +     
Sbjct: 96  GVTKDPTFGHAIMFG--LGGIFTEVFKDVTFRVIPISRLDAELMLNEIKGRKILEGYRGV 153

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
             ++    +L   + K   +  D+  +++NP++  +N  + VLD+KI
Sbjct: 154 RVSKEAIIELLLKVSKFVEENADVEGMDLNPVLARENDCV-VLDAKI 199


>gi|158520603|ref|YP_001528473.1| CoA-binding domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158509429|gb|ABW66396.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3]
          Length = 705

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 102/285 (35%), Gaps = 28/285 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +  LL  Y +P+  G +++    A    + L  P+ V+K+                   K
Sbjct: 11  SADLLEAYGIPIL-GKMVTDPQQAVQVARDLGYPV-VLKA------------ISEKIIHK 56

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
              +V          ++  L   +   +    G   + + V+  AD   EL +    D  
Sbjct: 57  TDAQVVFLNLKTEEAVKNALDRLMENVKQAGAGLP-DGILVQKMADPGFELLVGAKQDPG 115

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            G V  +    GG  +E  A   P        D    ++     ++ +        +   
Sbjct: 116 FGPVTMVG--HGGRFVELWADVQPGIGILTETDVEEMLSQTMAGTVLNGFRGPALDKPAV 173

Query: 188 GDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVS 246
             L  N+ +   D  +++ L++NP+I+ + G   V D ++  DD        +    D+S
Sbjct: 174 IRLAINVSRFMADHPEINELDLNPVIVYEQGYAIV-DCRLIADDPIT-----VPSGTDLS 227

Query: 247 EEDSREIEA----KQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           EE  + ++A    +   +   +  G +G ++    L + T+  I 
Sbjct: 228 EEKMKSLKAVFSPRSVAIVGASRPGTMGGIILKNCLGIPTVYPIN 272


>gi|70948377|ref|XP_743707.1| acetyl CoA synthetase [Plasmodium chabaudi chabaudi]
 gi|56523336|emb|CAH80919.1| acetyl CoA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 587

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 82/244 (33%), Gaps = 35/244 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++EY +K +L  Y++PV    +  ++   E+A   +  P  +         +        
Sbjct: 189 LNEYDSKQILEAYDIPVVNTKIYKTLSDVENA-DKINYPCAM---------KIYSDTITH 238

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYL 120
             D  G +   +S + +I+  ++I     +       G     V ++D  +I    EL L
Sbjct: 239 KKDIGGVILNINSKEELINAYKKI--YENVQAHKQEKGF--QGVTIQDMININDGIELIL 294

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE-- 178
               D+  G V    S  GG  +E            LLI P+    +        +    
Sbjct: 295 GYYYDKCFGPVLLFGS--GGSYVEIFKDTV------LLIPPITYSYAHHTIKNTKIYNAL 346

Query: 179 ------LQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISFDD 230
                  +            N  +   D    + E  INPL +  N ++  LD++ +   
Sbjct: 347 LGNSSRFKKCDMPKLITTIMNFSELVSDLLPYINESDINPLFVSGN-KMIALDARFTLRK 405

Query: 231 NALY 234
              +
Sbjct: 406 TINF 409


>gi|110677991|ref|YP_680998.1| acyl-CoA synthetase, putative [Roseobacter denitrificans OCh 114]
 gi|109454107|gb|ABG30312.1| acyl-CoA synthetase, putative [Roseobacter denitrificans OCh 114]
          Length = 676

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 77/219 (35%), Gaps = 38/219 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK  L ++ +PV +G+V+      E A   L  P  V+K+   A           
Sbjct: 464 LSEAEAKQSLARFGIPVPRGLVVKRAD-LEGAATALDAP-LVLKAMGLA----------- 510

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLS 121
                G +R+    +++ +  R++ G               +   VE+     + EL + 
Sbjct: 511 HKSEAGALRLNVQAETLATAARDMPG---------------DRFLVEEMVTGTVAELLIG 555

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP---LIGVTSEDVASLCDMLE 178
           +  D   G V  +A+  GG+  E         I    +D    L G+ +  +  LC    
Sbjct: 556 VTRDAAHGFVLTLAA--GGVLTELWGDQRSLLIPASRVDVADALAGLRAYPL--LCGYRG 611

Query: 179 LQGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMK 215
                     D    L     D    +  +EINPL+   
Sbjct: 612 AAPACLPAVIDAVMGLQDYVMDNADHVHEVEINPLMCTP 650


>gi|157930987|gb|ABW04208.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTIADMGFVNELANYGEYSGNPTRTETREYVKTVLDLMTRSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVRIYVRRGGPN 110


>gi|332981725|ref|YP_004463166.1| cyanophycin synthetase [Mahella australiensis 50-1 BON]
 gi|332699403|gb|AEE96344.1| cyanophycin synthetase [Mahella australiensis 50-1 BON]
          Length = 879

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 54/288 (18%), Positives = 98/288 (34%), Gaps = 45/288 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K++L    +PV  G   S    A S  +++  P+ VVK +   G +GKG + EL      
Sbjct: 219 KSILADIGIPVPIGQSCSEADEAISIAESIGYPV-VVKPK--GGNQGKGVWLELN----- 270

Query: 69  GVRVESSLKSVISDIREI-LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                 + ++V    +   L    I  +    G     + V D    + E     +V   
Sbjct: 271 ------NPEAVKQAFKSASLFDQEIIVEKYIKGRDYRVLVVGDKIIAVSEKIPPYVVGDG 324

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
              +  + +     +      + P  + K+ ID       E V S      L   +    
Sbjct: 325 HHTIVELVNMINSDERRGDDHERP--LTKIKID-------EQVTSYLHKNGLNIDSIPQS 375

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSE 247
           G       K +   + + L    + I +  ++   ++ ++       R   I  L DV+ 
Sbjct: 376 GQ------KVYLRVNGN-LSTGGIAIDRTDKIHPYNADLAL------RAARIIGL-DVAG 421

Query: 248 EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
            D   I A   ++    ++G I  +    G+ M        Y G P N
Sbjct: 422 ID---ITALDIDVPLDGVNGAIIEINAAPGIRMHHYP----YKGKPRN 462


>gi|303229171|ref|ZP_07315972.1| phosphoribosylamine--glycine ligase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516184|gb|EFL58125.1| phosphoribosylamine--glycine ligase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 420

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V S+V  A+  I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFSNVDEAKQFIAKTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + + ++L       + G  G   + V +E+         L+ + D  
Sbjct: 152 -GVVVAMTVEEANAAVDDML----SGNRFGEAG---STVVIEEFMAGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|148270645|ref|YP_001245105.1| phosphoribosylamine--glycine ligase [Thermotoga petrophila RKU-1]
 gi|147736189|gb|ABQ47529.1| phosphoribosylamine--glycine ligase [Thermotoga petrophila RKU-1]
          Length = 397

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 15/91 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  A+  V  +       IK    P YV+K+   A  RGK           
Sbjct: 95  AKRFMKKYGIRTARFEVAETPEELREKIKKF-SPPYVIKADGLA--RGK----------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGP 98
            GV +  S +  I    +++   LI    GP
Sbjct: 141 -GVLILDSKEETIEKGSKLIIGELIKGVKGP 170


>gi|91204565|emb|CAJ70793.1| strongly similar to acetate-CoA ligase (ADP-forming) subunit beta
           [Candidatus Kuenenia stuttgartiensis]
          Length = 242

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 80/228 (35%), Gaps = 18/228 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK LL  Y +   + +V SS H A  A  ++  P+ V+K                
Sbjct: 27  LLEPEAKQLLGTYGIVTTRFLVASSAHEAIQAANSIKYPV-VLKI--------ISPDLSH 77

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D+ G +    + K V +   +I  +   T        R+  + VE+ +    E+ +  
Sbjct: 78  KTDAGGVMLNIQNDKEVAAAYEKIFKNISKTVPDA----RIYGILVEEMSTPSTEIIVGG 133

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           L D   G         GG+ +E       +       + L  +     A L         
Sbjct: 134 LRDPQFGPTVMFG--IGGIFVELFKDVSFRIAPVEDYEALDMIREVKGARLLSGFRNAAP 191

Query: 183 A-RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   +   +        ++  +++NP++I   G  + +D++I  
Sbjct: 192 LDISEICHIIIRVSDIMISNEEIKEIDLNPILIYPKGT-KTVDARIVL 238


>gi|311108121|ref|YP_003980974.1| CoA-binding protein [Achromobacter xylosoxidans A8]
 gi|310762810|gb|ADP18259.1| CoA binding domain protein 5 [Achromobacter xylosoxidans A8]
          Length = 709

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 79/223 (35%), Gaps = 25/223 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADS 66
           KA+LR+  + V +G +  S     +A + L  P+   +V +QI                 
Sbjct: 494 KAMLREAGIAVPQGSLCRSAEETAAAAQALGFPVALKIVSAQIL------------HKTE 541

Query: 67  KGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLSLLV 124
            GGV +   +          +    +   Q     +R++ V VE    D  RE+ +++  
Sbjct: 542 VGGVWLDVRTPGQAAEAHTRM----VSQVQARRPDARIDGVLVEKMLHDAGREMLIAIRT 597

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQA 183
           D   G V  I    GG+ +E +     + +     D    +      A L     L    
Sbjct: 598 DLMYGRVLTIG--LGGIFVELLKDVAHRVLPIQPADVHDMLADLRHGAYLGQFRNLPPMD 655

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDS 224
                 L   L +   D+ D+   E NP+ +   G    VLD+
Sbjct: 656 TDALVRLVIQLAEFVSDRPDILEAEFNPVWVGPAGEGAWVLDA 698


>gi|170289351|ref|YP_001739589.1| phosphoribosylamine--glycine ligase [Thermotoga sp. RQ2]
 gi|281412955|ref|YP_003347034.1| phosphoribosylamine/glycine ligase [Thermotoga naphthophila RKU-10]
 gi|170176854|gb|ACB09906.1| phosphoribosylamine--glycine ligase [Thermotoga sp. RQ2]
 gi|281374058|gb|ADA67620.1| phosphoribosylamine/glycine ligase [Thermotoga naphthophila RKU-10]
          Length = 397

 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 15/91 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  A+  V  +       IK    P YV+K+   A  RGK           
Sbjct: 95  AKRFMKKYGIRTARFEVAETPEELREKIKKF-SPPYVIKADGLA--RGK----------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGP 98
            GV +  S +  I    +++   LI    GP
Sbjct: 141 -GVLILDSKEETIEKGSKLIIGELIKGVKGP 170


>gi|237756658|ref|ZP_04585167.1| phosphoribosylamine--glycine ligase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691178|gb|EEP60277.1| phosphoribosylamine--glycine ligase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 431

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 23/118 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P AK         A   IK +  P+ V+K+   A G+             
Sbjct: 106 AKNLMKKYGIPTAKFESFEKEEDAIKFIKEVGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GV V  + +  I  ++++          GP   RV    +E+  +     Y+  + D
Sbjct: 152 -GVVVAKTEEEAIQAVKDMFAGKF-----GPASKRV---VIEEFLEGEEASYICFVKD 200


>gi|11498873|ref|NP_070102.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
           [Archaeoglobus fulgidus DSM 4304]
 gi|22095482|sp|O28994|CARB_ARCFU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|2649305|gb|AAB89970.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
           [Archaeoglobus fulgidus DSM 4304]
          Length = 1076

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 33/169 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +RK  + V K  V   V  A +    +  P+ V  +    G             + G
Sbjct: 133 KEAMRKIGLDVPKSDVAHDVSEALAIADEIGYPVVVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +       +  ++           +N V +E+G    +E  L ++ D  +
Sbjct: 180 GI--AYNREELREIAERGIKMSM-----------INQVLIEEGVLGWKEFELEVMRD-LA 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S      IE            + + P   +T  +   L D  
Sbjct: 226 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDVEYQYLRDAA 268



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL + N+P  +  +  S+  A+   + +  P+ V  S +  G
Sbjct: 681 ELLERLNIPQPENGIAHSLEEAKEIARKIGFPVLVRPSYVLGG 723


>gi|15644006|ref|NP_229055.1| phosphoribosylamine--glycine ligase [Thermotoga maritima MSB8]
 gi|7994671|sp|Q9X0X7|PUR2_THEMA RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|4981805|gb|AAD36325.1|AE001780_9 phosphoribosylamine--glycine ligase [Thermotoga maritima MSB8]
          Length = 400

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 15/91 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  A+  V  +       IK    P YV+K+   A  RGK           
Sbjct: 98  AKRFMKKYGIRTARFEVAETPEELREKIKKF-SPPYVIKADGLA--RGK----------- 143

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGP 98
            GV +  S +  I    +++   LI    GP
Sbjct: 144 -GVLILDSKEETIEKGSKLIIGELIKGVKGP 173


>gi|57640074|ref|YP_182552.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus
           kodakarensis KOD1]
 gi|57158398|dbj|BAD84328.1| acetyl-CoA synthetase II (NDP forming), alpha subunit [Thermococcus
           kodakarensis KOD1]
          Length = 458

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 28/158 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  M N  G  + T D I   G   AN                      +D+   A  +
Sbjct: 296 RVAIMTNAGGPGVLTADAIDRKGLKLANLEEKTIEELRSFLPPMAAVKNPVDMIASARGE 355

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEG 361
                 K++  D +V  +    ++  F G+   +   +G++ AVKEV    P++ + + G
Sbjct: 356 DYYRTAKLLLRDPNVDMLIAICVVPTFAGMTPTEH-AEGVIKAVKEVNNGKPVLGLFMAG 414

Query: 362 ANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
              +    L+  +G+       D+   A  +V   K V
Sbjct: 415 YVSEKAKELLEANGIPSYERPEDVAAGAYALVQQAKNV 452


>gi|157930995|gb|ABW04212.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTIADMGFVNELANYGEYSGNPTRTETREYVKTVLDLMTGSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVRIYVRRGGPN 110


>gi|116694339|ref|YP_728550.1| Acetyl-CoA synthetase (NDP-forming) [Ralstonia eutropha H16]
 gi|113528838|emb|CAJ95185.1| Acetyl-CoA synthetase (NDP-forming) [Ralstonia eutropha H16]
          Length = 714

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 33/232 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKE 61
           + E +AK +L  Y VPV    + +S   A  A      P+ V+K +  A   + +     
Sbjct: 498 LTEREAKDVLAMYGVPVVGESLATSEQDAVRAADACGYPV-VLKVESPAIPHKSEAGVIR 556

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L  +S   V V    + V+++ R++               R+N V V+       E+ + 
Sbjct: 557 LGVNSAQEVAVAY--REVMANARKV-----------TADDRINGVLVQSQVPTGIEILVG 603

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDML 177
             VD   G +  +    GG+ +E +            I P     +    E +  +  + 
Sbjct: 604 ARVDPHLGALLVVG--LGGVMVELMQDTVA------TIAPCSAQQARAMLEQLRGVALLK 655

Query: 178 ELQGQARIDG---GDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDS 224
             +G A +D     ++  +L +   D+   + E  +NPLI   + R+  +D+
Sbjct: 656 GFRGAAGVDMDLLAEIVASLSEFAADQRDVIAEFDVNPLICTPD-RIVAVDA 706


>gi|41352987|gb|AAS01115.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGAVKELANYGEYSGNPSRTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGANV 364
             I I GG I     + K   GI+ A+ E    +  V     +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYAXKLKXVGVXIYVRRGGPNY 110


>gi|148254555|ref|YP_001239140.1| hypothetical protein BBta_3116 [Bradyrhizobium sp. BTAi1]
 gi|146406728|gb|ABQ35234.1| hypothetical protein BBta_3116 [Bradyrhizobium sp. BTAi1]
          Length = 713

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 87/268 (32%), Gaps = 22/268 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           + K +   Y +PV K  +  S   A      +  P+   +V   I               
Sbjct: 31  EGKLVCDAYGIPVPKEGLAKSAAEAARIAGDMGFPVVMKIVSPDIL-----------HKT 79

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           ++ G +    +          IL +     +     +++  + V+       E+ +  + 
Sbjct: 80  EAGGVIVGVKTADDAQKAYETILAN----AKKYKADAKIEGIQVQQMLTGGTEVIVGSIT 135

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D + G    +A   GG+ +E +     +       D L  +       +   +      +
Sbjct: 136 DGSFGK--LVAFGLGGVLVEVLKDVTFRLAPATKEDALSMLDGIQAHEMLKGVRGGDAVS 193

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
           R    D+   + +   D  ++  L++NP+   KNG +   D +I  D +   R       
Sbjct: 194 REALSDVIVKVSQLVSDFPEIVELDLNPVFATKNGAI-AADVRIVVDFDYKPRPAPRSND 252

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIG 270
             V+  +          +   A DG IG
Sbjct: 253 EIVTAMNRIMKPQAVAVIGASAEDGKIG 280


>gi|325968248|ref|YP_004244440.1| ATP-grasp domain protein [Vulcanisaeta moutnovskia 768-28]
 gi|323707451|gb|ADY00938.1| ATP-grasp domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 237

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 88/239 (36%), Gaps = 36/239 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E+++  LLR+YN+PV    ++  V+ A   +K +  P+ V+K               
Sbjct: 20  KLLEHESFELLRQYNIPVPDFALVQDVNEALKVVKDIGYPV-VLKVV---------SPDI 69

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           +     GGV +  +    + +  + + + +  K       R++   ++       E  + 
Sbjct: 70  IHKSDVGGVILNINNDDELRNACDRIKNNIKEKAPYA---RISGFLIQRMVPEGLETIIG 126

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE--- 178
              D   G    IA   GG+ +E +     + +          +T ED  ++   ++   
Sbjct: 127 ATKDPIFGH--VIAFGLGGIMVEVLQDVSFRIVP---------ITEEDARAMVREIKGYR 175

Query: 179 -------LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                  +  +       +     +   D  ++   ++NP+I+++ G+     D++   
Sbjct: 176 LFNGYRNMPARDEEAIIYVITKFSELLSDNPNIVEADLNPVIVLERGKGAYAADARFII 234


>gi|313893821|ref|ZP_07827387.1| phosphoribosylamine--glycine ligase [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441385|gb|EFR59811.1| phosphoribosylamine--glycine ligase [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 420

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++KYN+P A   V  +V  A+  I     P+ VVK+   A G+             
Sbjct: 106 AKDVMKKYNIPTAAYGVFHNVDEAKEFIAQTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + + ++L       + G  G   + V +E+  +      L+ + D  
Sbjct: 152 -GVVVAMTIEEANAAVEDMLR----GNRFGDAG---STVVIEEFMEGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|295110643|emb|CBL24596.1| carbamoyl-phosphate synthase, large subunit [Ruminococcus obeum
           A2-162]
          Length = 1071

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  + +   A+ A   L  P+ V  S +  G                G
Sbjct: 676 EILEQCQIPRPKGHTVFTAEEAKKAASELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +R+  S + V   I    +I     I       G  +    V DG DI   L   ++   
Sbjct: 721 MRIAVSDEDVEEYIGIINQIAQEHPILVDKYLMGKEIEVDAVCDGNDI---LIPGIMEHI 777

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               +        G  I         K  K  I       +E    L   L + G   I 
Sbjct: 778 ERAGI------HSGDSISVYPAQTISKKAKDTI-------AEYTRRLAKALHVIGMINIQ 824

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                       C +++ ++E+NP
Sbjct: 825 F---------IVCGEEVYVIEVNP 839


>gi|241763202|ref|ZP_04761261.1| cyanophycin synthetase [Acidovorax delafieldii 2AN]
 gi|241367701|gb|EER61967.1| cyanophycin synthetase [Acidovorax delafieldii 2AN]
          Length = 736

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL+   VP+ +G V++S   A  A + +  P+ VVK      GRG         D + 
Sbjct: 225 KSLLKSCGVPIPEGQVVNSPEEAWEAAQDIGLPV-VVKPSDGNHGRGVTLDLHKKEDIEA 283

Query: 69  GVRVES 74
              V  
Sbjct: 284 AYHVAY 289


>gi|317152576|ref|YP_004120624.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942827|gb|ADU61878.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 706

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+QA+ +LR Y +P  K V+  S   A +A   +  P+ +  +  +   +      ++  
Sbjct: 489 EFQAQEVLRAYGLPTPKTVLARSSEEAVAAAVEIGYPVVLKIASPNISHKSDVGGVKVNL 548

Query: 65  DSKGGVRVESSLKSVISDIREI 86
              G V   ++ + + +    +
Sbjct: 549 RDAGEVL--TNFREITARAMRM 568


>gi|153812946|ref|ZP_01965614.1| hypothetical protein RUMOBE_03353 [Ruminococcus obeum ATCC 29174]
 gi|149831024|gb|EDM86114.1| hypothetical protein RUMOBE_03353 [Ruminococcus obeum ATCC 29174]
          Length = 1071

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P  KG  + +   A+ A   L  P+ V  S +  G                G
Sbjct: 676 EILEKCEIPRPKGQTVFTAEEAKKAANELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +R+  S + V   I    +I     I       G  +    V DG DI   L   ++   
Sbjct: 721 MRIAVSDEDVEEYIGIINQIAQEHPILVDKYLMGKEIEVDAVCDGEDI---LIPGIMEHI 777

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               +        G  I         +  K  I       +E    L   L + G   I 
Sbjct: 778 ERAGI------HSGDSISVYPAQTISQRAKDTI-------AEYTRRLAKALHVVGMINIQ 824

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                       C +++ ++E+NP
Sbjct: 825 F---------IVCGEEVYVIEVNP 839


>gi|224370841|ref|YP_002605005.1| SucC4 [Desulfobacterium autotrophicum HRM2]
 gi|223693558|gb|ACN16841.1| SucC4 [Desulfobacterium autotrophicum HRM2]
          Length = 892

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 30/182 (16%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +A +R   I  + D  E       A+          G +  + N  G  +  +D ++  G
Sbjct: 268 DAAFRRAGILRVNDFEELFDC---AEFLAKLQRPKGGRLAVVSNAGGPGVMAVDALERQG 324

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
             PA                     N +D+ G    ++   A +I        G+L+ IF
Sbjct: 325 VEPALLSRETLSKLDAILPQGWSRQNPVDILGDTSPEQYMEAARICIEAEETDGLLL-IF 383

Query: 330 G--GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
              G+     L   +   +KE    +     + G N+D   ++  E+G  V+T    +  
Sbjct: 384 APVGLFDATTLATPLAQFLKESTFPV-FTAWMGGTNIDKARKIFNEAG--VVTYDSPERG 440

Query: 388 AQ 389
            +
Sbjct: 441 VR 442



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 25/234 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M   E +AK LLR Y +PV   ++  +   A      +   + +         +      
Sbjct: 488 MEFTEVEAKDLLRAYGIPVNACLLAETADKAAELAGQMGSSVALKVCSRDLLHKSDVGGV 547

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELY 119
           +L    +         K V    ++I+ S +   +  PT   +  V V+  A     EL 
Sbjct: 548 KLNLMGE---------KEVRQGFQDIMASVV---EYDPTAHIL-GVTVQPMAPAGDYELI 594

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG---VTSEDVASLCDM 176
                D  S     +    GG+  E         I    ++  +    V+   ++ + + 
Sbjct: 595 FGAKKD-ASFGPVLLF-GMGGVLTEVFRDT---AIGLPPLNVALAKTLVSDTKISRVFEG 649

Query: 177 L-ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              +         D+   L +   D  ++  L+INP +++  G L  +D+++  
Sbjct: 650 FRNISAVNITLVEDILIRLGRLVTDFPEIDELDINP-VLVSQGHLLAVDARVVI 702


>gi|188996498|ref|YP_001930749.1| phosphoribosylamine/glycine ligase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931565|gb|ACD66195.1| phosphoribosylamine/glycine ligase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 424

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 23/118 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P AK         A   IK +  P+ V+K+   A G+             
Sbjct: 106 AKNLMKKYGIPTAKFESFEKEEDAIKFIKEVGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GV V  + +  I  ++++          GP   RV    +E+  +     Y+  + D
Sbjct: 152 -GVVVAKTEEEAIQAVKDMFAGKF-----GPASKRV---VIEEFLEGEEASYICFVKD 200


>gi|312385225|gb|EFR29777.1| hypothetical protein AND_01012 [Anopheles darlingi]
          Length = 1760

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 21/122 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A+    ++   A++ I++ P    VVK+   A G+             
Sbjct: 494 SKDFMHRHGIPTARYASFTNPDEAKAFIRSAPYAALVVKASGLAAGK------------- 540

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + + EILG      + G  G  V    VE+         L+ +  RT
Sbjct: 541 -GVIVADTIEQACAAVDEILGDR----RFGAAGEVV---VVEELLTGEEVSVLAFVDSRT 592

Query: 128 SG 129
             
Sbjct: 593 VR 594


>gi|258406251|ref|YP_003198993.1| CoA-binding domain-containing protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798478|gb|ACV69415.1| CoA-binding domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 904

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 23/232 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK +L  Y +P+    +      A+     L  P+  +K+              L
Sbjct: 491 LSEPEAKEVLGAYGIPIVPTRIALDDEEAQLLAWDLGYPV-ALKA---------YSPDIL 540

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYL 120
                GGV ++  S + V   +  I G     K      G  V  +          ELY+
Sbjct: 541 HKSEVGGVALDLESPEEVEHAMGSIKGRLQKLKPDARLQGFTVQKM---ARRPGSYELYV 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLE 178
               D   G V      +GG  +E V +D    +  L +     +   +     L    E
Sbjct: 598 GATTDPVFGPVILFG--EGGTAVE-VIRDRAVGLPPLNMTLAKELIQQTRIARMLQSHPE 654

Query: 179 LQGQARIDGGDL-FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                 +D   L    + +   D  ++  L+INPLI+   G + VLD+++  
Sbjct: 655 QPNGVDMDAVRLTLMQVSQLIIDIPEVMELDINPLIVDHEG-VLVLDARLVV 705


>gi|284161775|ref|YP_003400398.1| carbamoyl-phosphate synthase, large subunit [Archaeoglobus
           profundus DSM 5631]
 gi|284011772|gb|ADB57725.1| carbamoyl-phosphate synthase, large subunit [Archaeoglobus
           profundus DSM 5631]
          Length = 1091

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 27/130 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +RK  + V +  +   V  A +  + +  P+ V  +    G             + G
Sbjct: 133 KECMRKIGLDVPRSDIARDVDEALAIAEEIGYPVVVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + K +   + + L  +L           ++ V +E+G    +E  L ++ D  +
Sbjct: 180 GI--AYNKKELREIVEKGLKLSL-----------IHQVLIEEGVIGWKEYELEVMRD-LA 225

Query: 129 GMVAFIASTQ 138
             V  I S +
Sbjct: 226 DNVVIICSIE 235



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P  +  +  SV  A+   + +  P+ V  S +  G
Sbjct: 683 KLLEELGIPQPEHGIAHSVEEAKEVARKIGYPVLVRPSYVLGG 725


>gi|149926398|ref|ZP_01914659.1| Cyanophycin synthetase [Limnobacter sp. MED105]
 gi|149824761|gb|EDM83975.1| Cyanophycin synthetase [Limnobacter sp. MED105]
          Length = 703

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  VPV +G +  S   A    + +  P+ VVK      GRG      L    + 
Sbjct: 213 KELLAQCGVPVPEGEMAKSPEHAWGIAQDIGVPV-VVKPVDGNWGRG----VSLELTKEE 267

Query: 69  GVRVESSLKSVISD 82
            V+    L    S 
Sbjct: 268 DVKNAWPLADKESY 281


>gi|332158035|ref|YP_004423314.1| hypothetical protein PNA2_0393 [Pyrococcus sp. NA2]
 gi|331033498|gb|AEC51310.1| hypothetical protein PNA2_0393 [Pyrococcus sp. NA2]
          Length = 238

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 27/236 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y +PV +  +  ++  A    K +  P+ +  +  QI      +     +
Sbjct: 22  EYEAKQVLKAYGLPVPEEKLAKTLDEAIEYAKEIGYPIAMKLMSPQILHKSDARVVMLNI 81

Query: 63  PADSKGGVRVESSLKSVISDI--REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             + +   + E   ++        EILG                 V +       RE+ +
Sbjct: 82  KDEEELKKKWEEIHENARKYRPDAEILG-----------------VLIAPMLKPGREVII 124

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLEL 179
            +  D   G         GG+ +E +     + +     D    +       +       
Sbjct: 125 GVTEDPQFGHAIMFG--LGGIFVEILKDVTFRLVPITEKDARKMIREIKAYPILAGARGE 182

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISFDDNA 232
           +        D+   + K   +    + E+  NP+ +   G    ++D++I     A
Sbjct: 183 KPADIEAIVDMLLKVSKLVDELKDYIKEMDLNPVFVYNEGEGAVIVDARIILKPRA 238


>gi|206889843|ref|YP_002249397.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206890566|ref|YP_002249447.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741781|gb|ACI20838.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742504|gb|ACI21561.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 695

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 83/224 (37%), Gaps = 18/224 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  +L  Y     +  +  +   A +  + +  P+ +  S  H   +      +L  ++
Sbjct: 488 EAMQILSLYGFSFPERALAKTPMEAVAIAERIGYPVVMKVSSPHILHKTDVGGVKLNLNN 547

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              V        + ++++ ++             + +  + + +     +E+   +  DR
Sbjct: 548 DKAVYNAF--VEITTNVKRVM-----------PDAYIEGIMIYEMVTGGKEVIFGVSYDR 594

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           T G +       GG+ +E +     + +     + L  +T    + + D +   +   + 
Sbjct: 595 TFGHMIMFG--LGGIYVEVLKDVSFRIVPVSEQEALEMITEIKGSKILDGVRGEKPYDKT 652

Query: 186 DGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISF 228
           D  +    L K   D   +  ++INP ++  NG +  LD++I  
Sbjct: 653 DIANCIRKLSKLVMDFPIIKEIDINPYMVFNNGGIG-LDARIII 695


>gi|10580499|gb|AAG19369.1| acetyl-CoA synthetase [Halobacterium sp. NRC-1]
          Length = 542

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 21/231 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  LL  Y +P   G V+ S  AA    + + G + +                 L    
Sbjct: 329 EAMDLLDAYGIPTPTGDVVDSPDAARRVARDIEGDVVM----------KIVSPDILHKSD 378

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            GGV+V     +V     ++    +         + +  + V++  D+    E  L +  
Sbjct: 379 IGGVKVGVETDAVADAYEDL----ITRATNYQPDATILGIQVQEMVDVDAGTETILGMNR 434

Query: 125 DRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G +         ++I E+ +        +   D +  + S  +             
Sbjct: 435 DPQFGPLLLFGLGGIFVEILEDTSVRVAPVSEREAGDMIDDLDSAPLLRGAR--GRDPAD 492

Query: 184 RIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNAL 233
                +    L +   D    L L++NPL+   +     LD +++ D + L
Sbjct: 493 EAAITEAIQRLSQLVTDFPAILELDVNPLLATGD-SATALDVQLTIDPDEL 542


>gi|307322827|ref|ZP_07602134.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Sinorhizobium meliloti AK83]
 gi|306891523|gb|EFN22402.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Sinorhizobium meliloti AK83]
          Length = 492

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 36/167 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VPV    + ++    ESA   +  P+                 K    +   
Sbjct: 199 RQLLAEAGVPVPAYRLAANATEVESAAAEIGLPVI---------------LKPAVGNGST 243

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GVR+      +      +LG   I + +         + VE+ A      Y     D   
Sbjct: 244 GVRLCRDAGELAEHTTYLLGGKYIWQTSP-------RILVEEFAQGP---YF--TADIMG 291

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + +   G          P  ++   I P   +T +    + D
Sbjct: 292 NEVVAVGAATFGP--------PPHFVYDEYIYPAP-LTDDQRTRIVD 329


>gi|170741641|ref|YP_001770296.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46]
 gi|168195915|gb|ACA17862.1| CoA-binding domain protein [Methylobacterium sp. 4-46]
          Length = 707

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 13/131 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY AKA L    VP  +G + +++  A  A + L  P+ V+K+Q           +    
Sbjct: 493 EYAAKAALAPLGVPFPEGRMATTLAEALRAAEVLGYPV-VLKAQ---------SAELSHK 542

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV V       +++  E L + +   +    G  ++ V VE       EL L    
Sbjct: 543 SDAGGVIVGLRDAQALAEGWERLAANVARHR---PGLVLDGVLVERMGPRGVELILGGRN 599

Query: 125 DRTSGMVAFIA 135
           D   G V  + 
Sbjct: 600 DPEWGPVVLVG 610


>gi|241766064|ref|ZP_04763979.1| phosphoribosylamine/glycine ligase [Acidovorax delafieldii 2AN]
 gi|241363920|gb|EER59214.1| phosphoribosylamine/glycine ligase [Acidovorax delafieldii 2AN]
          Length = 416

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 20/143 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA +R++ +P A     +   AA + +  L  P+ V+K+   A G+             
Sbjct: 92  SKAFMRRHGIPTADYDTFTDPAAAHAFVDRLGAPI-VIKADGLAAGK------------- 137

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GV V ++L+     +  +L      +T   G  G  V  V +E+  +   E    +L D
Sbjct: 138 -GVVVATTLQEAHDAVDFMLVDNKYGVTHNEGADGKAVPRVVIEEFLE-GEEASFIVLCD 195

Query: 126 RTSGMVAFIASTQGGMDIEEVAK 148
             +  V  +A++Q    +++  +
Sbjct: 196 GKN--VLALATSQDHKRLKDGDE 216


>gi|115374715|ref|ZP_01461992.1| acetyltransferase, gnat family [Stigmatella aurantiaca DW4/3-1]
 gi|310822736|ref|YP_003955094.1| acetyl-CoA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115368286|gb|EAU67244.1| acetyltransferase, gnat family [Stigmatella aurantiaca DW4/3-1]
 gi|309395808|gb|ADO73267.1| Acetyl-CoA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 911

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 96/287 (33%), Gaps = 47/287 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY++K LL  Y +   +  + ++   A S  + L  P+ VVK                
Sbjct: 505 LTEYESKQLLAAYGIATVETRLAATEDEAVSQAEALGYPV-VVKLH---------SRTIS 554

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGVR+  +  S + +    +  TL           V    V+    +   EL + 
Sbjct: 555 HKTDVGGVRLNLASASQVREAFSGIQRTLHGLGQADAFHGVT---VQPMVRLDGYELIVG 611

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
             +D   G V    +  GG+ +E       + +    ++  +     +   +   L    
Sbjct: 612 SSLDAQFGPVLLFGA--GGILVEVFQD---RALGLPPLNTTLARRLMERTRIYKALQGVR 666

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNALY-- 234
                       L     K   ++ +   ++INPL+     RL  LD+++   +  +   
Sbjct: 667 GRPPVDLAALEKLLVRFSKLVVEQRLIQEVDINPLLASAE-RLLALDARVVLHEPGVPES 725

Query: 235 ------------------RHLDIQEL--RDVSEEDSREIEAKQHNLS 261
                             R  D  EL  R +  ED  ++EA  H LS
Sbjct: 726 SLPPLAIHPYPYQYEGRLRTKDGAELIVRPIRPEDEPKMEAFHHALS 772


>gi|218884036|ref|YP_002428418.1| Branched-chain acyl-CoA synthetase (ADP-forming) beta subunit /
           acetyl-CoA synthetase (ADP-forming) beta subunit
           [Desulfurococcus kamchatkensis 1221n]
 gi|218765652|gb|ACL11051.1| Branched-chain acyl-CoA synthetase (ADP-forming) beta subunit /
           acetyl-CoA synthetase (ADP-forming) beta subunit
           [Desulfurococcus kamchatkensis 1221n]
          Length = 232

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 26/224 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +L  YN+P+A     S+   A    + +  P+ V                       GGV
Sbjct: 27  ILESYNIPLASYGFASTPGEAVEIAEKIGYPVVV----------KVVSPDISHKSDVGGV 76

Query: 71  RVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           R+  +S   V   + E+        Q    G+R+    V+       E+ +  L D   G
Sbjct: 77  RLGLTSSSEVYRAVEEMNRVI----QVKAPGARIEGFLVQKMMPKGVEVIIGSLNDAVFG 132

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVAS---LCDMLELQGQARI 185
            V       GG+  E       +      ID    +   E++ +         +    + 
Sbjct: 133 GVVMFG--LGGIFTEVFRDVSFRVA---PIDVREALEMIEELRASSIFNGYRGIPPVNKH 187

Query: 186 DGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISF 228
              D+   + +   +   +  +++NP+I   + +  V+D++I  
Sbjct: 188 ALADILVKVSRLIIENPWIDSMDLNPVIAYPD-KAVVVDARIIV 230


>gi|220910205|ref|YP_002485516.1| cyanophycin synthetase [Cyanothece sp. PCC 7425]
 gi|219866816|gb|ACL47155.1| cyanophycin synthetase [Cyanothece sp. PCC 7425]
          Length = 918

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 15/111 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    +PV KG VI  +   E AI ++ G   V+K      GRG          + 
Sbjct: 223 AKKVMADAGIPVPKGTVIRYLDELEDAIASIGGYPVVIKPLNGNHGRGITIGVNSWEIA- 281

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGAD 113
                    +       E+  S ++         RV       V V +   
Sbjct: 282 ---------EQAYDVASEVSKSVIVEHYHPGKDFRVLVVNGKVVAVAERVP 323


>gi|260903923|ref|ZP_05912245.1| phosphoribosylamine--glycine ligase [Brevibacterium linens BL2]
          Length = 780

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   NVP A+ VV  +   A +A+     P YVVK+   A G+             
Sbjct: 106 AKEIMESANVPTARAVVAYTPDEAAAALDEFGAP-YVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILG-STLITKQTGPTGSRVNCVYVEDG 111
            GV V S     ++     L  S  +  +    G  V+   + DG
Sbjct: 152 -GVVVTSDRAEALTHASSCLEVSDRVVIEDYLDGPEVSLFVLCDG 195


>gi|326777427|ref|ZP_08236692.1| CoA-binding domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326657760|gb|EGE42606.1| CoA-binding domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 742

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 84/228 (36%), Gaps = 25/228 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 529 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGPVGYPVV-----MKASGPRLAHKTEL 583

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T         ++ V V    D   E+ + +
Sbjct: 584 GLVKVG----LTSASQVRDAYREL------TDIARYESVDLDGVLVCQMIDRGVEMMVGV 633

Query: 123 LVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
             D   G    +    GG+ +E   + A   P    +   D L  +     A L  +   
Sbjct: 634 THDALFGPTVTVG--LGGVLVEVLHDAAVRVPPFGEQEARDMLGELRGR--ALLEGVRGG 689

Query: 180 QGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                    ++   + +   +   D++ L+INPL+++  G+    LD+
Sbjct: 690 PPVDVDALVEVVLRVQRMALELGDDLTELDINPLVVLGRGQGAVALDA 737


>gi|157375215|ref|YP_001473815.1| GCN5-related N-acetyltransferase [Shewanella sediminis HAW-EB3]
 gi|157317589|gb|ABV36687.1| GCN5-related N-acetyltransferase [Shewanella sediminis HAW-EB3]
          Length = 896

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 16/144 (11%)

Query: 3   IHE-YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           I E ++++ +L  Y +      V ++   A +    +  P+ V K Q             
Sbjct: 494 ILETHESQEILSAYGLNTIDTYVANTPEDAVTVANKIGYPVAV-KVQ--------SPDIH 544

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYL 120
             +D  G +   +    VI     I    L+T       G  V  + +  G    +E+ +
Sbjct: 545 HKSDVHGVMLNLTCEDEVIQAATAIRSRVLLTNPDAKLEGLIVQKMALTAG---AQEIRV 601

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE 144
           +++ D   G    +   +GG + E
Sbjct: 602 AVINDPVFGPAILLG--EGGSEWE 623


>gi|313902289|ref|ZP_07835694.1| phosphoribosylamine--glycine ligase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313467440|gb|EFR62949.1| phosphoribosylamine--glycine ligase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 448

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 26/166 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P A G V     AAE  ++  PGP +VVK+   A G+             
Sbjct: 107 AKAFMARHGIPTAPGWVFDDPAAAEDFLRRHPGP-WVVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V     + +  +R ++   ++    G  G RV    +E+  +      LS+L    
Sbjct: 153 -GVLVCDDAAASLEAVRRLMRQGVL----GAAGRRV---VIEERLEGRE---LSVLAVTD 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
                 +A  +    +E+  +  P         P+ GV+   + ++
Sbjct: 202 GRRAHLLAPARDYKRLEDGDRG-PNTGGMGAFSPVPGVSPALLDAI 246


>gi|77919825|ref|YP_357640.1| phosphoribosylamine--glycine ligase [Pelobacter carbinolicus DSM
           2380]
 gi|77545908|gb|ABA89470.1| phosphoribosylamine--glycine ligase [Pelobacter carbinolicus DSM
           2380]
          Length = 423

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 114/346 (32%), Gaps = 53/346 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ KY VP A     +    A + IK    P+ VVK+   A G+              
Sbjct: 107 KDLMAKYGVPTASYGTFTDCDEAVAFIKQQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +++  ++ +  IL         G  GS    V +E+  +     +L+       
Sbjct: 152 GVILADTVEQAVAAVESIL-------CEGAFGSAGARVVIEEFLEGEEASFLAFT---DG 201

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +  +AS+Q            P         P   VT E    + + + L+        
Sbjct: 202 ERIVPLASSQ-DHKAAYDGDTGPNTGGMGAYSPAPVVTPEIHDKIIEQV-LKPTIAGMAA 259

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
                      +       +   +++K+G L+VL+    F D        +  L+  S+ 
Sbjct: 260 -----------EGCAYSSILYAGLMIKDGELKVLEFNARFGDPET--QPLLARLK--SDI 304

Query: 249 DSREIEAKQHNLSYIALDGN----IGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
               +   + +LS + L+ +    +  ++   G             G   + LD   G +
Sbjct: 305 VPVLLACARGDLSGVELEWHDKAAVCVVMASGGYPG------DYAKGHAIDGLDAAAGIE 358

Query: 305 QDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVK 350
              V  A   +  DS V      + G       + + I  A + VK
Sbjct: 359 DLVVFHAGTTLQDDSIVTAGG-RVLGVTGLGTTVAEAIERAYQGVK 403


>gi|73542270|ref|YP_296790.1| cyanophycin synthetase [Ralstonia eutropha JMP134]
 gi|72119683|gb|AAZ61946.1| Cyanophycin synthetase [Ralstonia eutropha JMP134]
          Length = 878

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 224 KSLLESCGVPVPEGRMVESPEDAWEAAEDIGVPV-VVKP--YDGNHGRGVFTNLMTREEV 280

Query: 69  GVRVESSLKS 78
                 +++ 
Sbjct: 281 ETAYAVAIEE 290


>gi|311900598|dbj|BAJ33006.1| putative acyl-CoA carboxylase [Kitasatospora setae KM-6054]
          Length = 455

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 24/122 (19%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ +  +PV  G V  + S   A +    +  P+ ++K+    GGRG    ++    
Sbjct: 119 ARRLMGEAGLPVLPGSVGAVRSPAEARATAARVGYPV-ILKAVAGGGGRGMAVVRDDA-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  + +   +  R + G                 +Y+E   D  R + + +L D
Sbjct: 176 -----EMAGAYQETRAHARAVFGD--------------ERLYLERYVDGARHIEVQVLCD 216

Query: 126 RT 127
           R 
Sbjct: 217 RH 218


>gi|149182972|ref|ZP_01861428.1| UDP-N-acetylmuramyl tripeptide synthase [Bacillus sp. SG-1]
 gi|148849309|gb|EDL63503.1| UDP-N-acetylmuramyl tripeptide synthase [Bacillus sp. SG-1]
          Length = 876

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           AK +L++  +PV KG   SS     +A + +  P  V+K     G +GKG
Sbjct: 219 AKQILQQAGLPVPKGEPASSTEEIFAAAERIGYP-LVLKP--LHGRQGKG 265


>gi|157382752|gb|ABV48813.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 110

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGAVKELANYGEYSGNPSGTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+ E      ++ + + +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYADKLKEVGVRVYVRRGGPNY 110


>gi|55378214|ref|YP_136064.1| phosphoribosylaminoimidazole carboxylase ATP binding subunit
           [Haloarcula marismortui ATCC 43049]
 gi|55230939|gb|AAV46358.1| phosphoribosylaminoimidazole carboxylase ATP binding subunit
           [Haloarcula marismortui ATCC 43049]
          Length = 381

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 32/121 (26%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L    VPV +   + +      A + L  P  ++K+            +    D +G
Sbjct: 112 KRRLSDAGVPVPEFRAVDTADDLREACEELGYP-AMLKA------------RTGGYDGRG 158

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            +RVE   + V   + EI G                   VE+  D  RE  L+++  R +
Sbjct: 159 NIRVEG-PEDVADAVDEIAGPA----------------MVEEMVDFERE--LAVMGCRGA 199

Query: 129 G 129
            
Sbjct: 200 D 200


>gi|16082167|ref|NP_394609.1| acetyl-CoA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|10640464|emb|CAC12278.1| probable acetyl-CoA synthetase [Thermoplasma acidophilum]
          Length = 698

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 80/229 (34%), Gaps = 18/229 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +++E ++K +   Y + V K  +  S    +S +K    P+ V+K Q             
Sbjct: 486 SLNELESKEIFEAYGIKVNKTELAKSRDELKSLLKDFKYPV-VLKIQ--------SPDIV 536

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
              D  G +         +     I    +   +     +R++ V VE+      E  + 
Sbjct: 537 HKTDVGGVIVNVKDQDEALKAYDTI----ISNVKANAPQARIDGVVVEEMFRGDLETIIG 592

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            + D  +     +    GG  +E +     +       +    +       +      +G
Sbjct: 593 TVND-PTFGPTVMFGL-GGTAVEVLEDVSFRVAPVCEKEAYDMIRDTVAGKMMQKFRGRG 650

Query: 182 QARIDGG--DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
              +D     +    + A+   ++  ++ NP+I+ ++G + V D++I  
Sbjct: 651 PLNVDAVVDQIIRFSWLAYDHPEIKGIDANPMIVSEDGAIVV-DARIML 698



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 21/178 (11%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVN-------------GAGLAMA 281
           R   I+EL D+S   S +      NL  +   G IG +                  L   
Sbjct: 276 RANSIEELFDLSLTLSLQPPMGGDNLMVVTNGGGIGVLATDQAELSGIPLQTPSDDLQAK 335

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD--VLV 339
              +I  +G    N +D+   A  +  A   K +  D SV G+++ ++  +   D     
Sbjct: 336 IRQVIPSFGST-KNPIDMSAMATPEIYADTIKTVMEDDSVDGLVV-LYCEVANLDPSDAA 393

Query: 340 KGILSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           KGI++ V      IP+V   + G +    +  + ++G+   T    D A  K + A++
Sbjct: 394 KGIINGVLSSNRKIPVVAGFVGGEHSKNASLYLIKNGIP--TFDSPDKAV-KAMAALR 448


>gi|157382750|gb|ABV48812.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 110

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGAVKELANYGEYSGNPSRTETREYVRTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+ E      ++ + + +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYADKLKEVGVRVYVRRGGPNY 110


>gi|157931003|gb|ABW04216.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 111

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTIADMGFVNELANYGEYSGNPTRTETREYIKTVLDLMTRSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G+N 
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKTRQVGVKIYVREGGSNY 111


>gi|157382764|gb|ABV48819.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 110

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G+++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGVSVVYADTVADLGAVKELANYGEYSGNPSRTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+ E      ++ + + +R  G N 
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNEYADKLKEVGVRVYVRRGGPNY 110


>gi|110634576|ref|YP_674784.1| GCN5-related N-acetyltransferase [Mesorhizobium sp. BNC1]
 gi|110285560|gb|ABG63619.1| GCN5-related N-acetyltransferase [Chelativorans sp. BNC1]
          Length = 893

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 19/232 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA +  Y + V + +V+ + + A  A K L      +K       +   +    
Sbjct: 489 LTEPEAKAAIEAYGISVPETIVVRTGNDAGKAAKRL------LKQSEKIVVKLLSKEISH 542

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D  G V   ++ ++ +  +  I      T + G     V    V       +E+ L +
Sbjct: 543 KSDVGGVVLGIATPEAAVEAVHGIEERLRKTGEAGNIDGFVVQPMVTRKG--AQEVILGV 600

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDMLE 178
             D   G      +  GG  +E +       I    +D ++       +     L    +
Sbjct: 601 GRDPIFGPTVLFGA--GGTAVEILDDT---AIALPPLDNVLSGDLIDRTRIGRLLAGYRD 655

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                R         L +   D   +  ++INPL+    G +  LD++I  +
Sbjct: 656 RPPANRQAIVRALNALSQLIVDFPGIVSMDINPLLADGEG-VIALDARIEIE 706



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 33/166 (19%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA-- 292
           R   ++EL D +E  +R  + ++           +G + NG G  +  +D +   G    
Sbjct: 274 RVRGLRELFDAAETVARFPKLERS---------RVGIVTNGGGAGVLAVDRLADLGAELA 324

Query: 293 --------------P-----ANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGI 332
                         P     AN +D+ G A  ++  A+   +  DS    +L+ N   G+
Sbjct: 325 ALSQETIGKLDRVLPTNWSRANPVDIIGDAPAERYGASVAAVAEDSGTDALLVMNCPTGL 384

Query: 333 MRCDVLVKGILSAVKEVKIN-IPLVMRLEGAN-VDIGNRLIAESGL 376
                  + +    KE  IN  P++    G      G R++ E+G+
Sbjct: 385 ASPAEAAQAVARLAKEGMINGKPVLTCWLGEKTAREGRRVLQEAGI 430


>gi|87308769|ref|ZP_01090908.1| GCN5-related N-acetyltransferase [Blastopirellula marina DSM 3645]
 gi|87288480|gb|EAQ80375.1| GCN5-related N-acetyltransferase [Blastopirellula marina DSM 3645]
          Length = 895

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 89/262 (33%), Gaps = 41/262 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +KALL  Y +PV K  V  S + A    + L  P+   +   QI      K     +  +
Sbjct: 496 SKALLEAYEIPVTKPHVAWSKNDAVILAERLGYPVVMKIFSPQI----THKTDVDGVKLN 551

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                RVE++  ++I+  ++              G  +  +          EL +    D
Sbjct: 552 LSNAGRVEAAFDAMIASAKQ------KRPDAMIEGVTIQKMI---SVPNAHELIVGAKRD 602

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------- 177
              G V  + +  GG+  E            L + P   V       + + L        
Sbjct: 603 DVFGTVLMVGA--GGIAAEIFRDRA------LELPP---VNERLARRMLESLRSWPLLEG 651

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL- 233
               +G       +    +     D  ++  L+INPL+  ++  +  LD++I  D +A  
Sbjct: 652 YRGRKGVNVDRLIETLMRISYLVADYPEIKELDINPLLATED-DVVALDARIILDRDAFL 710

Query: 234 --YRHLDIQELRDVSEEDSREI 253
              R      +R   EE +R  
Sbjct: 711 NPPRPYSHLAIRPYPEELTRTA 732


>gi|320100611|ref|YP_004176203.1| acetyl-CoA synthetase (ADP-forming) subunit beta [Desulfurococcus
           mucosus DSM 2162]
 gi|319752963|gb|ADV64721.1| acetyl-CoA synthetase (ADP-forming) beta subunit [Desulfurococcus
           mucosus DSM 2162]
          Length = 234

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 20/220 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +P+A     S+   A +  + L  P+ V         +         +D  G 
Sbjct: 27  QLLESYGIPLAPYGFASTPMEAAAVAEKLGFPVVV---------KIVSPDIVHKSDVGGV 77

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
               SS + V      +L +          G+R+    V+       E+ +  L DR   
Sbjct: 78  ALGLSSGREVAEAASRMLEAV----SEKARGARIQGFLVQKMMPKGVEVIVGGLNDRV-- 131

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDML-ELQGQARIDG 187
               +     G    EV +D   ++  + ++  + +  E   + + +    +    +   
Sbjct: 132 -FGGVVMLGLGGVFTEVFRDVSFRVAPVSLEDALEMMGELKASRVFEGYRGMPPVDKAAL 190

Query: 188 GDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKI 226
            D+     +   +   +  +++NP+I   + +  V+D++I
Sbjct: 191 ADIVVKASRLIAENPWVDSMDLNPVIAYTD-KAVVVDARI 229


>gi|182436832|ref|YP_001824551.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465348|dbj|BAG19868.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 726

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 84/228 (36%), Gaps = 25/228 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 513 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGPVGYPVV-----MKASGPRLAHKTEL 567

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T         ++ V V    D   E+ + +
Sbjct: 568 GLVKVG----LTSASQVRDAYREL------TDIARYESVDLDGVLVCQMIDRGVEMMVGV 617

Query: 123 LVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
             D   G    +    GG+ +E   + A   P    +   D L  +     A L  +   
Sbjct: 618 THDALFGPTVTVG--LGGVLVEVLHDAAVRVPPFGEQEARDMLGELRGR--ALLEGVRGG 673

Query: 180 QGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                    ++   + +   +   D++ L+INPL+++  G+    LD+
Sbjct: 674 PPVDVDALVEVVLRVQRMALELGDDLTELDINPLVVLGRGQGAVALDA 721


>gi|220936220|ref|YP_002515119.1| acetyltransferase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997530|gb|ACL74132.1| acetyltransferase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 897

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 84/229 (36%), Gaps = 26/229 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +AKA+L  + +PV + ++  +   A  A  TL  PL +  +      +       L    
Sbjct: 499 EAKAVLSAFRIPVTQTLLARTPAEALVAASTLGYPLAMKIASPDITHKSDVGGVRLNITG 558

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              VR     + ++   RE     LI       G  +  +Y    +   REL + +L D 
Sbjct: 559 AEAVRRHF--QEMLQAAREAQPDALI------EGVTLERMY---RSHYGRELMVGVLRDP 607

Query: 127 TSGMVAFIASTQGGMDIEEVA------KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             G V    S  GG  +E +           + I + +I       +     L     + 
Sbjct: 608 VFGPVISFGS--GGTSMEVMQDRAVALPPLNETIIRNMIS-----RTRVARLLARFRHMP 660

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                    +   + +  C+   +  ++INPLI+ ++G L  +D++I  
Sbjct: 661 AVDAAALERVLLRISEMVCELPQVVEMDINPLIVDEHG-LAAVDARIGV 708


>gi|218245501|ref|YP_002370872.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC
           8801]
 gi|218165979|gb|ACK64716.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC
           8801]
          Length = 1081

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  VPV    + +++  A+   + +     +++     GG G G           
Sbjct: 133 KEAMAKIGVPVCPSGIANTLKEAQMIAEQIGSYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEEMA-----------QFGIDSSPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|255659542|ref|ZP_05404951.1| phosphoribosylamine--glycine ligase [Mitsuokella multacida DSM
           20544]
 gi|260848096|gb|EEX68103.1| phosphoribosylamine--glycine ligase [Mitsuokella multacida DSM
           20544]
          Length = 427

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK  V +    A + IK    P+ V+K+   A G+             
Sbjct: 107 SKNLMKKYGIPTAKYEVFTDADEARAYIKKEGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +L+  +  + EI+            G   + V +E+  +      L+  
Sbjct: 153 -GVIVAMTLEEALDAVHEIM-------DDAAFGKAGSRVVIEEFMEGEEASLLAFT 200


>gi|157930999|gb|ABW04214.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKII------TSDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +      +   S 
Sbjct: 1   WTMVAGGGASVVYADTIADMGFVNELANYGEYSGNPTRTETREYVKTVPDLMTRSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + + +R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVRIYVRRGGPN 110


>gi|41352953|gb|AAS01098.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 15/108 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T     +G
Sbjct: 1   WTMVAGGGASVVYSDTVADLGAVKELANYGEYSGNPTRAETREYVKTVFDLMTRSRHPQG 60

Query: 324 ILINIFGG-IMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGA 362
             I I GG I     +    +GI+ A+KE      ++ + + +R  G 
Sbjct: 61  DKILIIGGAIANFTDVAKTFEGIIDAMKEYADKLKEVGVKIYVRRGGP 108


>gi|319785382|ref|YP_004144858.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171270|gb|ADV14808.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 406

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VP+    V ++V   ES+   +  P+ ++K  +  G +              
Sbjct: 115 RQLLAEAGVPIPAYRVATNVADVESSAAEIGLPV-ILKPAVGTGSQ-------------- 159

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GVR+  ++  +      +LG   I +           + VE+ A+
Sbjct: 160 GVRLCRNIHELAEHTTYLLGGKHIWRSPP-------RILVEEFAE 197


>gi|260461858|ref|ZP_05810104.1| protein of unknown function DUF201 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032499|gb|EEW33764.1| protein of unknown function DUF201 [Mesorhizobium opportunistum
           WSM2075]
          Length = 389

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VP+    V ++V   ES+   +  P+ ++K  +  G +              
Sbjct: 98  RQLLAEAGVPIPAYRVATNVADVESSAAEIGLPV-ILKPAVGTGSQ-------------- 142

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GVR+  ++  +      +LG   I +           + VE+ A+
Sbjct: 143 GVRLCRNIHELAEHTTYLLGGKHIWRSPP-------RILVEEFAE 180


>gi|33591854|ref|NP_879498.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I]
 gi|33571497|emb|CAE44987.1| putative acetyl-CoA synthetase [Bordetella pertussis Tohama I]
 gi|332381271|gb|AEE66118.1| putative acetyl-CoA synthetase [Bordetella pertussis CS]
          Length = 713

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 86/237 (36%), Gaps = 37/237 (15%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E + KALLR Y +P+A+     +   A  A + +  P+ V+K+            + +  
Sbjct: 497 ESEVKALLRAYGIPLAQERFCRTAEQAVEAARAIGFPV-VLKAV---------SAQLVHK 546

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G V++  +  + +      +   L ++     G+ ++   V +      EL +  + 
Sbjct: 547 SDIGAVKLRLADDAAVRRAWAEIEQALSSQV---DGAVLDGCLVAEMVTAQSELLVGAIN 603

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML------- 177
           D   G    +    GG+ +E V      ++    +D      +E   +L   L       
Sbjct: 604 DAQFG-PMIMV-GFGGVTVELVPDT---QLAVAPVD------TEQAMALLRRLKQWPLLD 652

Query: 178 ---ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMK-NGRLRVLDSKISF 228
               +         ++   +     D    + E  INPL+I   +G+   +D++ + 
Sbjct: 653 GYRGMPKADVAAVAEVVSRVSWLIADLRDQVAELDINPLLIRAGDGKPIGVDARAAM 709


>gi|116754555|ref|YP_843673.1| carbamoyl phosphate synthase large subunit [Methanosaeta
           thermophila PT]
 gi|121694744|sp|A0B8K9|CARB_METTP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|116666006|gb|ABK15033.1| carbamoyl-phosphate synthase large subunit [Methanosaeta
           thermophila PT]
          Length = 1074

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 47/224 (20%)

Query: 2   NIHEYQAKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           +I E + + L +K       PV + + ++S+  AE A+K L  PL V  +    G     
Sbjct: 122 SIQEAEDRDLFKKAMERIGEPVPRSIAVTSLEEAEEAMKELGLPLIVRPAYTLGG----- 176

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                   S GGV    + + ++                G   SR++ V +E+      E
Sbjct: 177 --------SGGGV--ARTHEELMRICE-----------MGLKRSRIHQVLLEESVIGWTE 215

Query: 118 LYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASL 173
           +   ++  R S            MD   +     + I    I    D  I +      ++
Sbjct: 216 VEYEVM--RDSNNTCITICNMENMDP--MGIHTGESIVVTPIQTLSDHEIQMLRSAAINI 271

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              L ++G   I           A  + +  ++E+NP +   + 
Sbjct: 272 IRALGIEGGCNIQF---------AVRNGEYRVIEVNPRVSRSSA 306



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 46/206 (22%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P  K  +  S   A+   K +  P+ V  S +  G   +  + E        
Sbjct: 675 KLLNKLGIPQPKAGIAYSPEEAKRVAKEIGYPVLVRPSYVLGGRAMEIVYDESG------ 728

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             +E  ++  +    E                  + V ++D      E+ +  + D   G
Sbjct: 729 --LELYMREAVRVSHE------------------HPVLIDDFLQNAVEIDVDAVSD---G 765

Query: 130 MVAFIAS-----TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
               I +      + G+   + A   P     L  D +  V    V  +   L+++G   
Sbjct: 766 RDVLIGAIMEHIEEAGIHSGDSACMIPP--QTLPEDVIATVKDY-VRRIALALDVKGIIN 822

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
           I           A+ D  + +LE NP
Sbjct: 823 IQM---------AYKDGIVYVLEANP 839


>gi|51244510|ref|YP_064394.1| acetyl-CoA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875547|emb|CAG35387.1| probable acetyl-CoA synthetase [Desulfotalea psychrophila LSv54]
          Length = 701

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 82/229 (35%), Gaps = 26/229 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK +L  Y   V +G ++ S   A    + +  P+   VV   I            +   
Sbjct: 486 AKKILDAYGFNVPEGYLVDSADEAVEYARRIGFPVALKVVSPDI------------VHKT 533

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GGV +  +    + D  ++    L  KQ  P  +R+  VYVE  AD   E+ + +  D
Sbjct: 534 DMGGVCLNLTNAQQVQDGYDL--MKLRIKQQLPN-ARIQGVYVEKMADPGLEVIIGMNRD 590

Query: 126 RTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
              G    +    GG+ +E   +V            I  L    S  +         +  
Sbjct: 591 PQFG-PMLMFGL-GGIFVEVMKDVTFHLAPITQDEAIQMLKATRSYQIME--GRRGNKAV 646

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNG-RLRVLDSKISFD 229
             +   +    + +   D   +  L+INP I+ + G    V D+ I+ +
Sbjct: 647 DIVAIANGLQRISQLATDYPQIVELDINPFIVGEVGSDPIVADACITLE 695


>gi|297159701|gb|ADI09413.1| hypothetical protein SBI_06293 [Streptomyces bingchenggensis BCW-1]
          Length = 743

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 86/227 (37%), Gaps = 23/227 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+ +  S      + +     L
Sbjct: 530 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVAMKASAPQLAHKTELGLVRL 589

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       S   V    R++      T      G  ++ V V    +   E+ + +
Sbjct: 590 GLT---------SASQVRDTYRDL------TDIARYEGVELDGVLVCQMVERGVEMVVGV 634

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-VTSEDVASLCDML-ELQ 180
             D   G    +    GG+ +E V +D   ++     D     +T     +L D +  + 
Sbjct: 635 THDSLFGPTVTVG--IGGVLVE-VLRDTAVRVPPFGEDQARAMLTELRGRALLDGVRGMP 691

Query: 181 GQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                   ++   + +   +   D++ L++NPL+++  G+    LD+
Sbjct: 692 PCDVDALVEVVLRVQRMALELGDDLAELDVNPLMVLPRGQGAVALDA 738


>gi|297569084|ref|YP_003690428.1| CoA-binding domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924999|gb|ADH85809.1| CoA-binding domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 699

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 82/229 (35%), Gaps = 26/229 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK++L  Y   + +G + ++   A  A + +  P+   VV   I            +   
Sbjct: 488 AKSILGAYGFQIPEGYLATTADEAVEAAQRVGFPVAMKVVSPDI------------IHKS 535

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GGV++         D  ++   TL   Q  P  +R+  +YVE       E+ + +  D
Sbjct: 536 DLGGVKLNLIDAEAARDAFDL--MTLRIGQRAPE-ARIEGIYVEKMLGKGLEVIIGMSRD 592

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSEDVASLCDMLELQGQ 182
              G    +    GG+ +E +               I  L    S ++  L      +G 
Sbjct: 593 AQFG-PMLMFGL-GGIFVEVMKDVTFHLAPISEAEAIQMLKSTRSYEI--LEGRRGQRGV 648

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLII-MKNGRLRVLDSKISFD 229
                      + +   D   ++ L+INP I+     +  V D++I+ +
Sbjct: 649 DLAAIAQGLQRISQLTTDFPQIAELDINPFIVGEIGQQPMVADARITLE 697


>gi|294792983|ref|ZP_06758129.1| phosphoribosylamine--glycine ligase [Veillonella sp. 6_1_27]
 gi|294455928|gb|EFG24292.1| phosphoribosylamine--glycine ligase [Veillonella sp. 6_1_27]
          Length = 420

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V   V  A++ I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFHKVDEAKAFIAQTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++      + ++L       + G  G   + V +E+  +      L+ + D  
Sbjct: 152 -GVVVAMTIDEANVAVEDML----SGNRFGDAG---STVVIEEFMEGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|257058535|ref|YP_003136423.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC
           8802]
 gi|256588701|gb|ACU99587.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC
           8802]
          Length = 1081

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  VPV    + +++  A+   + +     +++     GG G G           
Sbjct: 133 KEAMAKIGVPVCPSGIANTLKEAQMIAEQIGSYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEEMA-----------QFGIDSSPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|157930985|gb|ABW04207.1| ATP citrate lyase beta subunit [uncultured Sulfurihydrogenibium
           sp.]
          Length = 110

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTIADMGFVNELANYGEYSGNPTRTETREYVKTVLDLMTRSKHPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           K  ++ I G I     + K   GI+ A KE      ++ + +  R  G N
Sbjct: 61  KPKILLIGGAIANFTDVAKTFDGIIDAFKEYADKMRQVGVRIYARRGGPN 110


>gi|307946507|ref|ZP_07661842.1| CoA-binding protein [Roseibium sp. TrichSKD4]
 gi|307770171|gb|EFO29397.1| CoA-binding protein [Roseibium sp. TrichSKD4]
          Length = 677

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 33/226 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           MN  E ++KALL+ + V +      S    A    K +  P+ +           KG   
Sbjct: 473 MN--EAKSKALLKDHGVRIPVNKSASGADEAADVAKAIGFPVVL-----------KGTGI 519

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELY 119
               ++   +   +   +V      +                 N   VE+     + EL 
Sbjct: 520 AHKTEAGAVILGLTDRAAVQEAANRM---------------PTNQFLVEEMVTGTIAELL 564

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLE 178
           + ++ D   G V  +A+  GG+  E +       +          + S +    L     
Sbjct: 565 IGVVRDPAHGFVLTLAA--GGVLTELLKDSVSLLVPSSREAVRESLLSLKVARQLTGYRG 622

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
                     D    +        +  +EINPL+   +      D+
Sbjct: 623 QPACDLDAVLDTIEAVQACVMAHPIEEIEINPLLCGPD-FAIAADA 667


>gi|154151162|ref|YP_001404780.1| CoA-binding domain-containing protein [Candidatus Methanoregula
           boonei 6A8]
 gi|153999714|gb|ABS56137.1| CoA-binding domain protein [Methanoregula boonei 6A8]
          Length = 694

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 85/239 (35%), Gaps = 36/239 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E Q  ALL KY +PV +  ++ +   AE   + +  P  V K                
Sbjct: 6   LSEAQGYALLEKYGIPVPRYAIVQTAAEAEKKAEEIGFP-LVAKIV--------SSDVIH 56

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+ G +   +S +      R I+G+  +       G  +  V +E+      EL +  
Sbjct: 57  KSDAGGVITGIASAEEAGEAFRSIMGN--VKAAYPEAG--IQGVILEEQQKAGLELIVGG 112

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G V  +    GG  +E +     + +           + E V ++   L     
Sbjct: 113 KTDPAFGKVLSVG--MGGTLVELLRDISLRLLP---------ASDETVRAMVRSLRGYPL 161

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                    +       +   L + F +  +++  +INP+I+   G    +D++I   D
Sbjct: 162 LAGYRGAGPKDEEAFCAIIGALGRMFLEHAEIAEFDINPVILYGKG-ACAVDARIYVSD 219


>gi|41352963|gb|AAS01103.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYG--GAPANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T      G
Sbjct: 1   WTMVAGGGASVVYADTVADLGQVKELANYGEYSGNPSRAETREYVKTVFDLMTRSKHPAG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             I I GG I     + K   GI+ A+KE      +I I + +R  G N 
Sbjct: 61  HKILIIGGAIANFTDVAKTFDGIIDAMKEYADKLKEIGIRIYVRRGGPNY 110


>gi|224012040|ref|XP_002294673.1| acetyl-coa synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220969693|gb|EED88033.1| acetyl-coa synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 973

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 76/240 (31%), Gaps = 35/240 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  Y +P    ++  +   A  A   +  P+ V                  
Sbjct: 534 LTELESKQLLSAYGIPTVTTILACTAEEAALAADGVGYPVVV----------KINSETIT 583

Query: 63  PADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELY 119
                GGV++   S + V     EI        +   +      V V+   D+    EL 
Sbjct: 584 HKTDVGGVKLNIHSAEQVREAFCEI----EKDVEAKFSRDYFQGVTVQPMVDVRDSYELI 639

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDM 176
           +    D   G V    S  GG  +E            L + PL    +  +     +   
Sbjct: 640 VGASPDSQFGPVMLFGS--GGTLVEIYQDKA------LALPPLNSNLAHLMMKETKIYKA 691

Query: 177 L----ELQGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           L                L  N      +K   +  +EINPL++  N  L  LD+++   D
Sbjct: 692 LKGTRGRSSVDLSALERLIVNFSHLVMEKWNWIREIEINPLLV-SNNSLVALDARVILHD 750



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 22/198 (11%)

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALD 266
               L    +    VLD+        + R   I+E+ ++ E   ++   K  +L+ +   
Sbjct: 299 HTGSLAGSDD----VLDAAFK--RCGVLRVNKIREVFEIVELLGKQPRPKGKHLTIVTNA 352

Query: 267 GNIGCMV------NGAGLAMATMDIIKLYGG------APANFLDVGGGADQDKVAAAFKI 314
           G  G +       +G  L+  + D +K          + +N +D+ G A     A   +I
Sbjct: 353 GGPGVISTDALIESGGQLSWISDDTMKSLNEILPPHWSHSNPIDILGDATPATYAKVVEI 412

Query: 315 ITSDSSVKGIL-INIFGGIMRCDVLVKGILSAVKEVKINIPLVM-RLEGANVDIGNRLIA 372
              D    GIL +     +       +GI    +++    P++   + G  V+ G  ++ 
Sbjct: 413 AAQDEYSDGILIVLTPQSMTDPSATARGIAEIARKIGGRKPILASWMGGKGVEEGRAILD 472

Query: 373 ESGLNVITAIDLDDAAQK 390
           E+G+   T    D AA+ 
Sbjct: 473 EAGIP--TYDYPDSAAEM 488


>gi|240102483|ref|YP_002958792.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA)
           [Thermococcus gammatolerans EJ3]
 gi|239910037|gb|ACS32928.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA)
           [Thermococcus gammatolerans EJ3]
          Length = 458

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 28/156 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQD 306
            +  M N  G  + T D I   G   A                     N +D+   A  +
Sbjct: 296 RVAIMTNAGGPGVLTADQIDKRGLKLADLEEKTIEELRSFLPPMAAVKNPVDMIASARGE 355

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEG 361
                 K++  D +V  +    ++  F G+   +   +G++ AVKEV    P++ + + G
Sbjct: 356 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTPTEH-AEGVIRAVKEVNNGKPVLGLFMAG 414

Query: 362 ANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVK 396
              +    L+ E+G+       D+   A  +V   K
Sbjct: 415 YVSEKAKELLEENGIPSYERPEDVAAGAYALVQQAK 450


>gi|256831202|ref|YP_003159930.1| CoA-binding domain-containing protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256580378|gb|ACU91514.1| CoA-binding domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 710

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 86/223 (38%), Gaps = 23/223 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKELPA 64
           Q++ LL  Y++PV  G +I ++  A+   + L  P+ +  V SQI      K     +  
Sbjct: 10  QSRTLLDAYDIPVL-GRMIRTLEQAKQTAQELGFPVAMKTVSSQIIH----KTDLGCVLL 64

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           D K        L  + +   E++ +      T   G     + ++       E+ +    
Sbjct: 65  DRK-------DLTELEAGYAELMDNVRAAGVTEIDG-----ILIQPMVKPGLEVLIGATQ 112

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D + G +  I S  GG  +E +A   P        +    +       + D        +
Sbjct: 113 DPSFGPMTMIGS--GGRFVELLADVTPGIGILEENEVRAMLDRTHAGRILDGFRGPALDK 170

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                L  N+ +   +  ++  L++NP+I+ + G   ++D+++
Sbjct: 171 EAVIRLAMNVSRFMAEHPEIHELDLNPVIVYEEG-FAIVDARL 212


>gi|325697204|gb|EGD39090.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK160]
          Length = 419

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|297538643|ref|YP_003674412.1| cyanophycin synthetase [Methylotenera sp. 301]
 gi|297257990|gb|ADI29835.1| cyanophycin synthetase [Methylotenera sp. 301]
          Length = 720

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+   VPV +G ++ S   A  A + +  P+ VVK      GRG         D + 
Sbjct: 219 KQLLQNCGVPVPEGRIVESPEDAWEAAEDIGLPV-VVKPSDGNHGRGVSTELMTRVDVEA 277

Query: 69  GVRVES 74
             ++  
Sbjct: 278 AFKLAD 283


>gi|309779051|ref|ZP_07673818.1| cyanophycin synthase (L-aspartate-adding) [Ralstonia sp. 5_7_47FAA]
 gi|308922116|gb|EFP67746.1| cyanophycin synthase (L-aspartate-adding) [Ralstonia sp. 5_7_47FAA]
          Length = 886

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL+   VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 224 KSLLQSCGVPVPEGRMVDSAEDAWEAAEDIGVPV-VVKP--YDGNHGRGVFTNLMTREEV 280

Query: 69  GVRVESSLKS 78
                 +++ 
Sbjct: 281 ETAYAVAIEE 290


>gi|156740102|ref|YP_001430231.1| acetyl coenzyme A synthetase subunit alpha [Roseiflexus
           castenholzii DSM 13941]
 gi|156231430|gb|ABU56213.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain
           [Roseiflexus castenholzii DSM 13941]
          Length = 698

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 18/227 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A+ ++  Y + + K ++  S   A      L  P+ +  S      +      +L  
Sbjct: 485 ELEAREVIEAYGMRLPKSLLAQSPEEAAEIAARLGFPVVMKISSPDILHKSDIGGVKLGI 544

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                 R    L    +             +     +R+  V V++     RE+ + +  
Sbjct: 545 GDSAAARDAYELIEYRA-------------RKYSREARIWGVLVQEQVRKGREVLVGVSR 591

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G    IA   GG+ +E +     +       +    V +     L   +       
Sbjct: 592 DPQFG--PLIAFGLGGIYVEALRDVAFRLAPVSRQEAAEQVRAIRAFPLLRGVRGEPPAD 649

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                ++   + +   D  ++  ++INPL++   G    VLD++I  
Sbjct: 650 IAAAEEVILRVSQLVTDFPEIVEMDINPLVVYNRGEGATVLDARIIL 696


>gi|41352985|gb|AAS01114.1| AclB [uncultured prokaryote]
 gi|41353003|gb|AAS01123.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHEDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI++A+++      +    + +R  G N 
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIINALEKYADKLKEHKTKIYVRRGGPNY 109


>gi|332286695|ref|YP_004418606.1| putative pimeloyl-CoA synthetase [Pusillimonas sp. T7-7]
 gi|330430648|gb|AEC21982.1| putative pimeloyl-CoA synthetase [Pusillimonas sp. T7-7]
          Length = 707

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 25/226 (11%)

Query: 3   IHEYQAKALLRKYN-VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E+  K LL   + + + + ++++       A  T PG   V K Q           + 
Sbjct: 494 LSEWDGKQLLHTQDAIMLPRAILVTDTEP--DARPTPPGFPAVAKLQ---------STQL 542

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV +       ++D  + L            G  V  V VE+      EL L 
Sbjct: 543 LHKSDAGGVILPLHDSQAVNDATQALFQK-----GSALGIAVQGVLVEEMIPFDHELLLG 597

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L   R       ++  +GG++ E       + +     D ++ +  E + S   +   +G
Sbjct: 598 L--QRHPRFGPVLSLARGGVEAELDPDVVTRLLPLDENDIVMML--ESLRSSALLRGFRG 653

Query: 182 QARIDGGDLFPNLY---KAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
              +D   +   +    + F  ++++ +EINPL +  + RL  LD+
Sbjct: 654 GPSVDISAIAQRIAFFCEWFLSQELAEVEINPLAVKGD-RLWALDA 698


>gi|317057961|gb|ADU90681.1| putative cyanophycin synthetase [Collimonas sp. MPS11E8]
          Length = 718

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL+   VPV +G V+ S   A  A + +  P+ V
Sbjct: 222 KTLLQACGVPVPEGQVVDSPAEAWEAAEDIGLPVVV 257


>gi|71908331|ref|YP_285918.1| GCN5-related N-acetyltransferase:CoA-binding [Dechloromonas
           aromatica RCB]
 gi|71847952|gb|AAZ47448.1| GCN5-related N-acetyltransferase:CoA-binding protein [Dechloromonas
           aromatica RCB]
          Length = 905

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 89/241 (36%), Gaps = 32/241 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KA+LR + VPVA+ +V  +   A    + +  P+ +         +       L
Sbjct: 491 LSEMESKAILRAFRVPVAQTMVARTATEALLLAEQIGFPIAMKVDSPDLPHKSDAGGVRL 550

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
              +   VR                   + T Q     +++N V +E        REL +
Sbjct: 551 NIGNAPAVRNAYH-------------DIIDTVQKRRPDAKINGVSIEPFLSRPNGRELMI 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED------VASLC 174
            +  D   G         GG D+E  +         + + PL    ++D       + + 
Sbjct: 598 GVFRDPIFG-PVITF-GAGGFDVEIFSDRS------VALPPLNKFLAKDLIESTRASKIL 649

Query: 175 DMLE-LQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           D    +    R    ++   + +  C+   +  L++NPLI+ +NG +   D++I  D  A
Sbjct: 650 DQFHNMPPVDREALKEVLLCISEMVCELPWIQELDLNPLIVDENGAI-AADARIVIDHAA 708

Query: 233 L 233
            
Sbjct: 709 S 709



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 64/189 (33%), Gaps = 32/189 (16%)

Query: 214 MKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV 273
             +G   V DS      +A  R   +  +++V +       AK     +  L   +  + 
Sbjct: 256 THSGMAAVSDSVF----DAAVRRAGVVRVQNVGQLF---YAAKALASKFRPLGNRLAIIT 308

Query: 274 NGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKVAAAF 312
           NG G      D     G   A                     N +D+GG A  ++   A 
Sbjct: 309 NGGGPGAMAADRAGDMGIPLAELSNETMAVLNKAMPTNWSHSNPIDIGGDATPERYREAI 368

Query: 313 KIITSDSSVKGILINIFGGIMRCD--VLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
             +T+D +V   L+ +       D   + + I+    ++  +I     +    V  G +L
Sbjct: 369 MAVTNDPNVDSTLV-MLSPQAMTDPLAVAQAIVEVADKLNRSIIC-CWMGEEQVREGRKL 426

Query: 371 IAESGLNVI 379
           + +SG+   
Sbjct: 427 LEDSGIPAF 435


>gi|319789917|ref|YP_004151550.1| phosphoribosylamine/glycine ligase [Thermovibrio ammonificans HB-1]
 gi|317114419|gb|ADU96909.1| phosphoribosylamine/glycine ligase [Thermovibrio ammonificans HB-1]
          Length = 426

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R+  VP A   V    + A+  IK    P+ VVK+   A G+             
Sbjct: 106 AKEIMRELGVPTAPFWVFEDPNKAKEFIKEKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +  +  I    ++ K  G  G   N + VE+        YL ++ D  
Sbjct: 152 -GVVVAQTVEEALEAVERI----MVQKVFGEAG---NRIVVEECLKGEEVSYL-VVTDGE 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 RYIPL 207


>gi|260461869|ref|ZP_05810115.1| Carbamoyl-phosphate synthase L chain ATP-binding [Mesorhizobium
           opportunistum WSM2075]
 gi|319785392|ref|YP_004144868.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032510|gb|EEW33775.1| Carbamoyl-phosphate synthase L chain ATP-binding [Mesorhizobium
           opportunistum WSM2075]
 gi|317171280|gb|ADV14818.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 428

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 38/167 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VP+    + ++    ESA+  +  P+ +               K        
Sbjct: 118 RQLLAEAGVPMPSYRLAANAAEVESAVAQIGLPVVI---------------KPALGSGSI 162

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GVR+  ++  +      +L       ++ P       + VE+ A                
Sbjct: 163 GVRLCRNVDDLAEHATYLLSGR---HRSSP------RILVEEFA------------QGPH 201

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
                + +   G++  E     P  IF+  I P   +TSE+   + D
Sbjct: 202 YSADIMGNEVIGIEAAEFGPP-PHFIFREYIHPAP-LTSEEYKCIAD 246


>gi|150400899|ref|YP_001324665.1| carbamoyl-phosphate synthase, large subunit [Methanococcus aeolicus
           Nankai-3]
 gi|150013602|gb|ABR56053.1| carbamoyl-phosphate synthase, large subunit [Methanococcus aeolicus
           Nankai-3]
          Length = 1061

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 32/139 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      V V K  V  +V  + S  + L  P+ V  +    G            
Sbjct: 129 RELFKEACKKVGVDVLKSEVAYTVEESLSIAEKLGYPVVVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    + + + S   + L  +L            N + +E+     +E    ++ 
Sbjct: 177 -TGGGV--AFNPEELKSIASKGLEYSLK-----------NQILIEESIIGWKEYEYEVI- 221

Query: 125 DRTSGMVAFIASTQGGMDI 143
            R       I  T   +D 
Sbjct: 222 -RDLNDNVIIVCTIENIDP 239


>gi|307331569|ref|ZP_07610680.1| ATP-grasp domain protein [Streptomyces violaceusniger Tu 4113]
 gi|306882789|gb|EFN13864.1| ATP-grasp domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 749

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 77/235 (32%), Gaps = 39/235 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+ +  S      + +     L
Sbjct: 536 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVVMKASAPQLAHKTELGLVRL 595

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       S   V    RE+      T      G  ++ V V        E+ + +
Sbjct: 596 GLT---------SASQVRDTYREL------TDIARCEGVELDGVLVCQMVQRGVEMVVGM 640

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G    +    GG+ +E            + + P      +   ++   L     
Sbjct: 641 SHDTLFGPTVTVG--IGGVLVEVFRDAA------VRVPPFG---EDQARAMLAELRGRAL 689

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                           ++   + +   +    L E  +NPL++++ G+    LD+
Sbjct: 690 LDGVRGAPPADVDALVEVVLRVQRMALELGDHLAELDVNPLMVLERGQGAVALDA 744


>gi|301632899|ref|XP_002945517.1| PREDICTED: cyanophycin synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 582

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G V++    A    + + GP+ V  S          R   L    + 
Sbjct: 302 KRLLAACGVPVPEGRVVAHAEEAWEVAQDIGGPVTVKPS-----DGNHARGVTLELTGEA 356

Query: 69  GVRVESSLKS 78
            ++   +L  
Sbjct: 357 EIKAAFALAE 366


>gi|161528817|ref|YP_001582643.1| CoA-binding domain-containing protein [Nitrosopumilus maritimus
           SCM1]
 gi|160340118|gb|ABX13205.1| CoA-binding domain protein [Nitrosopumilus maritimus SCM1]
          Length = 705

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +K++L+ Y V V    +++S   A    K +  PL   VV  QI                
Sbjct: 24  SKSILKNYGVKVPPYALVTSAEEAAKEAKKIGFPLVMKVVSPQIL------------HKT 71

Query: 66  SKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             GGV+V   ++  V     ++ G       +   G  V  + +E       EL + +  
Sbjct: 72  DVGGVKVGLDNVADVKKTFTDMYGRL-----SKKKGVNVKGILLEKMVPKGVELIVGIQN 126

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G +  +    GG+  E +     + +     D    +     + L       +   
Sbjct: 127 DSQFGPIIMVG--MGGIMTEVMKDVAFRMLPITTSDAKSMLNELKGSKLLKGFRGSEPID 184

Query: 184 RIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                 +  N+ K   +    ++ ++ NP+I+       V+D+KI  +
Sbjct: 185 TNLVAKMLVNIGKLGVENADYINSIDFNPVIVYPKSH-YVVDAKIILN 231


>gi|226349955|ref|YP_002777068.1| putative acyl-CoA synthetase [Rhodococcus opacus B4]
 gi|226245870|dbj|BAH47137.1| putative acyl-CoA synthetase [Rhodococcus opacus B4]
          Length = 711

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 27/222 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            + LL +  +P     + +S   A +A   L  P+ +         + +    EL     
Sbjct: 502 GRDLLERAGIPAVPATLATSTDDAVAAAVRLGEPVALKMCSAQVAHKTELGGVELGVSGT 561

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V       +  +                  G  ++ V V        EL + +  D  
Sbjct: 562 TAVAAAYERLAARAQAA---------------GVELDGVLVSPMRTGGVELLVGVTHD-P 605

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQA 183
                  A   GG  +E +       +  L + P    +  +      +L      +   
Sbjct: 606 DWGPVL-AVAVGGALVELLDDS---ALRVLPVGPDEVRSMFEELRGYKLLTGFRGSKPAD 661

Query: 184 RIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLD 223
                D+   L +       S+  +EINPL++  + R+  LD
Sbjct: 662 IDGLVDVVLRLSELALALGPSVESVEINPLLVDGD-RIEALD 702


>gi|27378270|ref|NP_769799.1| hypothetical protein blr3159 [Bradyrhizobium japonicum USDA 110]
 gi|27351417|dbj|BAC48424.1| blr3159 [Bradyrhizobium japonicum USDA 110]
          Length = 790

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 116/368 (31%), Gaps = 45/368 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           + K +   Y +PV K  V  S   A     ++  P+   +V   I               
Sbjct: 108 EGKLVCDAYGIPVPKEGVARSAGEAGKMAASMGFPVVMKIVSPDIL-----------HKT 156

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           ++ G +    + +        ILG+     +     +++  V V+       E+ +  + 
Sbjct: 157 EAGGVIVGLKTAEDAEKAYETILGN----AKKYKADAKIEGVQVQQMLAGGTEVIVGSIT 212

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D + G    +A   GG+ +E +     +       D L  +       +   +   +   
Sbjct: 213 DGSFGK--LVAFGLGGVLVEVLKDITFRLAPATKEDALSMLDGIQAHEILKGVRGGEPVN 270

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
           R    D+   + +   D  ++  L++NP+           D +I  D             
Sbjct: 271 RTALADVIVKVSQLVTDFPEIVELDLNPVFATA-KSAIAADVRIVVD------------F 317

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY--GGAPANFLDVG 300
             V +   R  E     +S I     +  +   A        ++K    GG   +   + 
Sbjct: 318 AYVPKPKPRPTEEIVAAMSRIMQPKAVAVVGASAEDGKIGNSVMKNLINGGYKGDIYPIH 377

Query: 301 GGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRL 359
             A +     A+K +     V G++      I       K + +A+ E  +  IP  + +
Sbjct: 378 PKATEILGYKAYKSV---KDVPGVIDTAVFAIP-----AKFVAAALTECGEKKIPGAVLI 429

Query: 360 EGANVDIG 367
                + G
Sbjct: 430 PSGFAEAG 437


>gi|332365376|gb|EGJ43139.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK1059]
          Length = 420

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|330831886|ref|YP_004400711.1| phosphoribosylamine-glycine ligase [Streptococcus suis ST3]
 gi|329306109|gb|AEB80525.1| phosphoribosylamine-glycine ligase [Streptococcus suis ST3]
          Length = 420

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S+   A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +   RE+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAAREML----LDNKFGDSGARV---VIEEFL 189


>gi|33603770|ref|NP_891330.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50]
 gi|33577895|emb|CAE35160.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50]
          Length = 713

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 85/235 (36%), Gaps = 37/235 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + KALLR Y +P+A+     +   A  A + +  P+ V+K+            + +    
Sbjct: 499 EVKALLRAYGIPLAQERFCRTAEQAVEAARAIGFPV-VLKAV---------SAQLVHKSD 548

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G V++  +  + +      +   L ++     G+ ++   V +      EL +  + D 
Sbjct: 549 IGAVKLRLADDAAVRRAWAEIEQALSSQV---DGAVLDGCLVAEMVTAQSELLVGAINDA 605

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--------- 177
             G    +    GG+ +E V      ++    +D      +E   +L   L         
Sbjct: 606 QFG-PMIMV-GFGGVTVELVPDT---QLAVAPVD------TEQAMALLRRLKQWPLLDGY 654

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMK-NGRLRVLDSKISF 228
             +         ++   +     D    + E  INPL+I   +G+   +D++ + 
Sbjct: 655 RGMPKADVAAVAEVVSRVSWLIADLRDQVAELDINPLLIRAGDGKPIGVDARAAM 709


>gi|291548468|emb|CBL21576.1| carbamoyl-phosphate synthase, large subunit [Ruminococcus sp.
           SR1/5]
          Length = 1071

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 63/204 (30%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L K  +P  KG  + +   A+ A   L  P+ V  S +  G                G
Sbjct: 676 AILEKCEIPRPKGHTVFTAEEAKKAANELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +R+  S + V   I    +I     I       G  +    V DG DI   L   ++   
Sbjct: 721 MRIAVSDEDVEEYIGIINQIAQEHPILVDKYLMGKEIEVDAVCDGEDI---LIPGIMEHI 777

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               +        G  I         +  K  I       +E    L   L + G   I 
Sbjct: 778 ERAGI------HSGDSISVYPAQTISQKAKDTI-------AEYTRRLAQALHVIGMINIQ 824

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                         +D+ ++E+NP
Sbjct: 825 F---------IVVGEDVYVIEVNP 839


>gi|125716921|ref|YP_001034054.1| phosphoribosylamine--glycine ligase [Streptococcus sanguinis SK36]
 gi|125496838|gb|ABN43504.1| Phosphoribosylamine-glycine ligase; phosphoribosyl glycinamide
           synthetase (GARS), putative [Streptococcus sanguinis
           SK36]
          Length = 420

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|282849163|ref|ZP_06258548.1| phosphoribosylamine--glycine ligase [Veillonella parvula ATCC
           17745]
 gi|282580867|gb|EFB86265.1| phosphoribosylamine--glycine ligase [Veillonella parvula ATCC
           17745]
          Length = 420

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V   V  A++ I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFHKVDEAKAFIAQTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++      + ++L       + G  G   + V +E+  +      L+ +  +T
Sbjct: 152 -GVVVAMTIDEANVAVEDML----SGNRFGDAG---STVVIEEFMEGEEASLLAFVDGKT 203

Query: 128 SGMVAFIASTQG 139
              V+ IAS   
Sbjct: 204 V--VSMIASQDH 213


>gi|311108632|ref|YP_003981485.1| ATP-grasp domain-containing protein 3 [Achromobacter xylosoxidans
           A8]
 gi|310763321|gb|ADP18770.1| ATP-grasp domain protein 3 [Achromobacter xylosoxidans A8]
          Length = 711

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 24/230 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E QAKALL +Y V   +    +S  AA +A + +  P+ +         +         +
Sbjct: 499 EAQAKALLAQYGVRSPRESQAASAEAAAAAARAIGFPVAL---------KLVADGVLHKS 549

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +  G          V      IL +     Q       +  V V +      E+ + L  
Sbjct: 550 EIGGVQLRLRDEAEVREAFERILANA-ARHQVPAA--AIRGVLVSEMVVDGVEMLVGLHR 606

Query: 125 DRTSGMVAFIAS----TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           D   G V  + +     +   D+        +   +  +D      +     L     L 
Sbjct: 607 DEVFGPVLSVGAGGVWVEVDADVARCHLPANRAQIEQALD-----QTRIARRLASHRGLP 661

Query: 181 GQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDSKIS 227
            + +    D    +   F      +  LE+NPL+++  G+ +  LD+ I 
Sbjct: 662 ARDKAALVDAVQRIAALFTALGDGVQSLEVNPLVVLNQGQGVVALDAVIE 711


>gi|41352973|gb|AAS01108.1| AclB [uncultured prokaryote]
 gi|41352991|gb|AAS01117.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHKDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI++A ++      +    + +R  G N 
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIINAFEKYADKLKEHKTKIYVRRGGPNY 109


>gi|223932374|ref|ZP_03624377.1| phosphoribosylamine/glycine ligase [Streptococcus suis 89/1591]
 gi|302023138|ref|ZP_07248349.1| phosphoribosylamine--glycine ligase [Streptococcus suis 05HAS68]
 gi|223899055|gb|EEF65413.1| phosphoribosylamine/glycine ligase [Streptococcus suis 89/1591]
          Length = 420

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S+   A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +   RE+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAAREML----LDNKFGDSGARV---VIEEFL 189


>gi|30913184|sp|Q9F1S9|PUR2_STRSU RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|12082205|dbj|BAB20832.1| phosphoribosylamine-glycine ligase [Streptococcus suis]
          Length = 420

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S+   A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +   RE+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAAREML----LDNKFGDSGARV---VIEEFL 189


>gi|14591497|ref|NP_143577.1| hypothetical protein PH1739 [Pyrococcus horikoshii OT3]
 gi|3258170|dbj|BAA30853.1| 212aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 212

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 64/197 (32%), Gaps = 20/197 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPA 64
           +AK +L+ Y +P+ +  V  +   A    + +  P+   +V  QI            +  
Sbjct: 25  EAKEILKLYGIPIPEFKVARNEEEAVKFSREIGYPVVMKIVSPQI------------IHK 72

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV++         + RE   + +   +     + +  V +     + RE+ + ++ 
Sbjct: 73  SDAGGVKINIKNDE---EAREAFRTIMENARRYKPDADLWGVIIYKMLPLGREVIVGMIR 129

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQA 183
           D   G         GG+ +E +     +       D L  +       +       +   
Sbjct: 130 DPQFGPAVMFG--LGGIFVEILKDVSFRVAPISKDDALEMIKEIKAYPILAGARGEKPVN 187

Query: 184 RIDGGDLFPNLYKAFCD 200
                D+   + +   +
Sbjct: 188 IEALADIIVKVGELALE 204


>gi|303245359|ref|ZP_07331643.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ]
 gi|302493208|gb|EFL53070.1| CoA-binding domain protein [Desulfovibrio fructosovorans JJ]
          Length = 703

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 82/228 (35%), Gaps = 21/228 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+QA+ +LR YN+P    V+  S   A +  + +  P+ V+K             +    
Sbjct: 490 EFQAQEVLRAYNLPTPNTVLARSSDEAVAGAEKIGYPV-VLKI---------ASPQISHK 539

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLSLL 123
              GGV+V  +    + +            Q     + +    V++ A    +E+ +   
Sbjct: 540 SDVGGVKVNLADAEAVKNA---FFDITARAQRMRPEAYIAGCLVQEMAPKGCKEIIIGFK 596

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--ELQG 181
            D   G    +    GG+ +E V KD   ++  L  D   G+  E  + +          
Sbjct: 597 RDEQFG-PLLMFGL-GGIYVE-VLKDIAFRLAPLGRDDAKGIIREIKSYMLLKGVRGEPP 653

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  D+   + +   D  ++   E NP+++     +   D +I+ 
Sbjct: 654 VNFQAIEDILLTMSELALDFPEIQEAEFNPVLVNAEKAVVA-DVRITL 700


>gi|304318121|ref|YP_003853266.1| cyanophycin synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779623|gb|ADL70182.1| cyanophycin synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 875

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 16/112 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++++Y +PV +G V  + + A +  + +  P+ VVK     G +GKG F  L    + 
Sbjct: 217 KNIIKEYGLPVPEGDVAYNENDAIAIAEEIGYPV-VVKP--FNGNQGKGVFLNLLNKEEL 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGADIL 115
            V           + + I    ++ +       RV       V V +     
Sbjct: 274 IV--------AYRNAKNISDLVIVERHIKGKNYRVLVVGDRVVAVSERIPAR 317


>gi|222874691|gb|EEF11822.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           EY++KA+L +  +P A+G + +S   A +    +  P+  +K+Q
Sbjct: 181 EYESKAVLAQAGIPFARGRLATSAEQAVAIAAEIGWPV-ALKAQ 223


>gi|94970033|ref|YP_592081.1| CoA-binding protein [Candidatus Koribacter versatilis Ellin345]
 gi|94552083|gb|ABF42007.1| CoA-binding protein [Candidatus Koribacter versatilis Ellin345]
          Length = 912

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 27/234 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY++K LL  Y +P     V ++   A +    +  P+ V+K                
Sbjct: 508 LTEYESKKLLEMYGIPTVPTEVAATEEEAVAHADKMGYPI-VLKLYSLT--------ITH 558

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
             D  G V       +V     +I   T +T++ G        V V+  A +   EL + 
Sbjct: 559 KTDVGGVVLNLRDAAAVRKAFNDI--RTAVTEKKGAE--HFQGVTVQPMAKLDGYELIIG 614

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
             +D   G    +  T G   + EV KD    I    ++  +     D   +   L  ++
Sbjct: 615 SSLDPQFG-PVLLFGTGG--QLVEVFKDRALAIP--PLNSTLARRMMDQTKIYTALKGVR 669

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSL-----LEINPLIIMKNGRLRVLDSKISFD 229
           G+  +D      NL   F +          L+INPL+   + RL  LD+++   
Sbjct: 670 GRKSVDMAA-LENLMVRFSELIAEQPWIKELDINPLLASPD-RLLALDARVVVH 721


>gi|48290859|dbj|BAB63438.2| phosphoribosylamine-glycine ligase [Streptococcus suis]
          Length = 418

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S+   A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  I   RE+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAIEAAREML----LDNKFGDSGARV---VIEEFL 189


>gi|323700569|ref|ZP_08112481.1| CoA-binding domain protein [Desulfovibrio sp. ND132]
 gi|323460501|gb|EGB16366.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132]
          Length = 701

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 80/228 (35%), Gaps = 21/228 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A+ +LR Y +P  +  +  +   A +A + +  P+ V+K         K     +  
Sbjct: 489 EFEAQQVLRAYGLPTPRTKLARTSDEAVAAAEEIGYPV-VLKI-ASPDISHKTDVGGVAV 546

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +      V  + K + +  + +       +     G  V     E     +RE+ +    
Sbjct: 547 NLLNAREVMETFKEITARAQRM------RRDAYIAGCLVQ----EMAPPGVREVIIGFKR 596

Query: 125 DRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   G    +    GG+ +E   +++        +   + +  + S  +         + 
Sbjct: 597 DEQFG-PMLMFGL-GGVYVEIMKDISFKLAPLSRQDAFEIVREIKSYMLLKGLK--GDKP 652

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                   +   + +   D  ++   E NP +++ N R  V D +++ 
Sbjct: 653 VNLAALERIIMVMSRLAQDLPEVLEAEFNP-VLVNNERAMVADVRMTL 699


>gi|300711702|ref|YP_003737516.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halalkalicoccus jeotgali B3]
 gi|299125385|gb|ADJ15724.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halalkalicoccus jeotgali B3]
          Length = 384

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 31/110 (28%), Gaps = 30/110 (27%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L    VPV     + S     +A++ L  P  V   +    GRG             
Sbjct: 113 KRALADAGVPVPAFRAVDSPEELRAALEELGTPAMVKAREGGYDGRGN------------ 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                   +     + E+ G+                  VE+  D  REL
Sbjct: 161 --LPIEDPEEAADVLSELGGAA----------------MVEEMVDFEREL 192


>gi|124027049|ref|YP_001012369.1| Acyl-CoA synthetase (NDP forming) [Hyperthermus butylicus DSM 5456]
 gi|123977743|gb|ABM80024.1| Acyl-CoA synthetase (NDP forming) [Hyperthermus butylicus DSM 5456]
          Length = 245

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 19/230 (8%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A A+   Y VPVA   +  +   A  A + +  P+ V+K               
Sbjct: 22  KLLEHEALAVAELYGVPVAGYGLARNEDEAVEAAERIGYPV-VLKIV--------SPDIV 72

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELYL 120
             +D  G +      + V     EI+ +    K+  P    V  V V+  A     E+ +
Sbjct: 73  HKSDVGGVIVGLEKPEDVKKAYNEIIENV---KRHAPNARIV-GVLVQKMAPKGAVEVIV 128

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
             L D   G    +    GG+ +E       +       D    +     + +      L
Sbjct: 129 GGLRDPVFG-PTIMFGL-GGIFVEVFRDVSFRVAPFTERDAEEMINEIKASKILKGYRNL 186

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             +       +     K   +  ++  L++NP++   +     +D++I  
Sbjct: 187 PPRDIKALIKVIMAAQKLMVENPEIRELDLNPVLSYPD-SAITVDARIIV 235


>gi|87118828|ref|ZP_01074727.1| predicted Acetyl-CoA synthetase [Marinomonas sp. MED121]
 gi|86166462|gb|EAQ67728.1| predicted Acetyl-CoA synthetase [Marinomonas sp. MED121]
          Length = 727

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E++AK LL  Y + VAK +++      + A         V+K               
Sbjct: 510 DLFEFEAKNLLSSYRLDVAKEIIVRDAAELDDAYAEFGDIPLVMKVV---------SKDI 560

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV++  + K  +   RE   S L +       + +  V +   A    E+ + 
Sbjct: 561 LHKSDAGGVKLNLTGKDALYAARE---SILASCFAYKADADIEGVLITPMARKGTEVIIG 617

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
           +  D   G    +    GG+ +E +     + I     D +  +     + L + +    
Sbjct: 618 MSQDPIFG-PVLMFGL-GGIFVEILKDVSFRAIPLSRYDAITMIDQIKASKLFEGVRGEL 675

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
              +    DL   +     +  D+S L++NP+I    G   V D++I  D
Sbjct: 676 PVDKDALVDLLLTVSAIIENHPDISELDLNPVIAYDKGYAIV-DARIIVD 724


>gi|22299875|ref|NP_683122.1| carbamoyl phosphate synthase large subunit [Thermosynechococcus
           elongatus BP-1]
 gi|22296060|dbj|BAC09884.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Thermosynechococcus elongatus BP-1]
          Length = 1100

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 56/169 (33%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +++  V V    + +++  A +  + +     +++     GG G G           
Sbjct: 133 KEAMQRIGVAVCPSGLANTLEEARAIAQEIGVYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +               G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEAIATA-----------GLEASPVSQILIEQSLIGWKEYELEVMRD-MA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S +   +I+ +       I    + P   +T ++   L D  
Sbjct: 227 DNVVIICSIE---NIDPMGIHTGDSI---TVAPAQTLTDKEYQRLRDAA 269



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +LR+ N+P        S   A S  + +  P+ V  S +  G
Sbjct: 703 KILRELNIPQPPNGTARSYAEALSIAERIGYPVVVRPSYVLGG 745


>gi|226358157|ref|YP_002787896.1| cyanophycin synthetase [Deinococcus deserti VCD115]
 gi|226319800|gb|ACO47794.1| putative cyanophycin synthetase [Deinococcus deserti VCD115]
          Length = 917

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KALL +  +PV +G V+ +   A +A + L GP+ V K     G  G+G   EL  D + 
Sbjct: 242 KALLDRAGLPVPRGAVVRTAEDAVAAARRLRGPV-VTKP--LDGNHGRGVSIELTEDEQV 298

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                 + +     + E        +     G  V    V +   
Sbjct: 299 RQGFAEARQHSRDVVVEQYFQGNDHRVLVINGEVVA---VAERIP 340


>gi|167945874|ref|ZP_02532948.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 42

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 141 MDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           M+IEEVA + P+KI   ++DP  G+       L   L L+G
Sbjct: 1   MNIEEVAAETPEKILTTVVDPAAGLQPYQCRKLAFGLGLEG 41


>gi|332970027|gb|EGK09025.1| phosphoribosylamine-glycine ligase [Desmospora sp. 8437]
          Length = 449

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KY VP  +    +   AA   I+    P+ VVK+   A G+             
Sbjct: 131 AKELMEKYGVPTGRYRAFTDPEAAIRYIREQGAPI-VVKADGLAAGK------------- 176

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      + +++ S          G     + VE+  +   E+ L   VD  
Sbjct: 177 -GVIVARTLDEAEKAVEDLMRSRTF-------GKAGEEIVVEEYLE-GEEISLMAFVDGE 227

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 228 TVRPMVPA 235


>gi|312139423|ref|YP_004006759.1| gnat acetyltransferase [Rhodococcus equi 103S]
 gi|325672688|ref|ZP_08152384.1| GNAT family acetyltransferase [Rhodococcus equi ATCC 33707]
 gi|311888762|emb|CBH48074.1| putative GNAT acetyltransferase [Rhodococcus equi 103S]
 gi|325556565|gb|EGD26231.1| GNAT family acetyltransferase [Rhodococcus equi ATCC 33707]
          Length = 898

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 25/69 (36%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  LL  Y VPV +    ++   A +A   L  P+ V  +      R       L   
Sbjct: 680 FEAAQLLECYGVPVVEFRAATTEDEAVAAADELGYPVAVKATGELWRHRPDLGGVRLDLV 739

Query: 66  SKGGVRVES 74
               VR+  
Sbjct: 740 GPDSVRLAY 748


>gi|302878607|ref|YP_003847171.1| CoA-binding domain-containing protein [Gallionella
           capsiferriformans ES-2]
 gi|302581396|gb|ADL55407.1| CoA-binding domain protein [Gallionella capsiferriformans ES-2]
          Length = 892

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 89/243 (36%), Gaps = 32/243 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KA+L  +++PVA+ +V  S + A    + L  P+ +  +      +      +L
Sbjct: 490 LSEMESKAVLAAFHIPVAQTMVARSPNEALLIAQQLGFPVAMKVNSRDITHKSDAGGVKL 549

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              +   VR     +   +  +   G+ +      P   + N           REL + +
Sbjct: 550 NLGNAQAVRAAYH-EITENIKKNRPGAHMDGISIQPMIVKANG----------RELMVGV 598

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCD 175
           + D   G         GG  +E +         ++ + PL    + D+         L  
Sbjct: 599 ICDPVFG-PVITF-GAGGTMVEVMGDA------QVTLPPLNSFLARDLINRTNVSRLLGA 650

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFDDNALY 234
              +          +   + +  C+  M   ++INPLI+ ++G +   D+++  +    +
Sbjct: 651 FRHMPPVNMEALESVLLRVSEMVCELPMLTEMDINPLILDEHG-VLAADARVVVE----F 705

Query: 235 RHL 237
           +  
Sbjct: 706 KQP 708


>gi|57234039|ref|YP_181915.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides
           ethenogenes 195]
 gi|57224487|gb|AAW39544.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides
           ethenogenes 195]
          Length = 1089

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL K   PV     +++   A    + +  P+ +  +    G                
Sbjct: 140 KELLAKIGEPVPPSETVTTAEDALKVAREIGLPVVIRPAYTLGG---------------T 184

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G    ++ + V               QTG   S ++ + VE      +E+   ++  R  
Sbjct: 185 GGGFANNWEEVEEVA-----------QTGLNASPIHQILVEKSVAGWKEIEYEVM--RDG 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
                        D   +       I  + +  L    S+ +      +   L ++G   
Sbjct: 232 ADNCITICNMENFDP--MGVHTGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCN 289

Query: 185 IDGG 188
           +   
Sbjct: 290 VQLS 293



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 12/102 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P A G  I+++  A S  +++  P+ V  S +  GGR      E+ +D+   
Sbjct: 684 RLLSEMGIPQAPGAGITTLDEALSIAESIGYPVVVRPSYVL-GGRAM----EIVSDASDL 738

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           +R  S+   + +    ++   L+       G  V    + DG
Sbjct: 739 IRYMSAAIELNTGHPILIDKYLV-------GKEVEVDAIADG 773


>gi|315231078|ref|YP_004071514.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP]
 gi|315184106|gb|ADT84291.1| acetyl-CoA synthetase (ADP-forming) alpha chain [Thermococcus
           barophilus MP]
          Length = 454

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 27/138 (19%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  M N  G  + T D I  +G   AN                      +D+   A  +
Sbjct: 296 RVAIMTNAGGPGVLTADEIDKHGLKLANLEEETMQKLREFLPPMAAVKNPVDMIASARGE 355

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR-LEG 361
           +     K++  D +V  +    ++  F G+   +   +G++ AVKEV    P++   + G
Sbjct: 356 EYYKTAKLLLEDKNVDMLIAICVVPTFAGMTPTEH-AEGVIRAVKEVNNGKPVLALFMAG 414

Query: 362 ANVDIGNRLIAESGLNVI 379
              +    L+ + G+ V 
Sbjct: 415 YVSEPAKELLEKEGIPVY 432


>gi|46447204|ref|YP_008569.1| hypothetical protein pc1570 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46400845|emb|CAF24294.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 920

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 27/236 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K +L  Y +P+ +  V  +   A         P+ V+K                
Sbjct: 510 LTEFESKQVLSLYGIPIIQTEVAKNAAEAVKLADQFGYPV-VLK---------LFSETIT 559

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYL 120
                GGV++   + + V+    EI  S    K      G  V  +  + G     EL L
Sbjct: 560 HKTDVGGVKLNLKTSQEVLIAYEEIFQSISKIKGVQHFNGVTVQRMIKQSGY----ELIL 615

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--- 177
               D   G    +  T GG  +E       + +    ++  +         + + L   
Sbjct: 616 GSSTDPQFG-PVLLFGT-GGQLVEVFKD---RALALPPLNRNLAQQLMQKTKIYEALLGV 670

Query: 178 -ELQGQARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              +        ++     +    +K +   +INPL++  +  +  LD +I   DN
Sbjct: 671 RGRKAINLSHLEEILIRFSQLIVGNKWIKECDINPLLV-SDNEIIALDGRIILHDN 725


>gi|312865866|ref|ZP_07726088.1| phosphoribosylamine--glycine ligase [Streptococcus downei F0415]
 gi|311098741|gb|EFQ56963.1| phosphoribosylamine--glycine ligase [Streptococcus downei F0415]
          Length = 419

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 100/285 (35%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+++ KY VP A+    S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMAKYGVPTARYQTFSDFEQAKAYIEAQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYILPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVNRS 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            +      L     +    L +    LI+  +G ++   +S+   D         +    
Sbjct: 247 VETIVKPVLEGMMAEGRPYLGVLYAGLILTADGPKVIEFNSRFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  S  ++ K+ NL++      +G +V   G  +A    ++L
Sbjct: 304 DFAQNISDILDGKEPNLTWTEQGVTLGVVVASEGYPLAYEKGVEL 348


>gi|320354216|ref|YP_004195555.1| CoA-binding domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122718|gb|ADW18264.1| CoA-binding domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 889

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 40/200 (20%)

Query: 217 GRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGA 276
           G   V D+        + R   +  L D +E  +++       L+ +          NG 
Sbjct: 257 GEDAVYDAAFK--RAGIVRVPSLARLFDCAELTAKQPRPAGTRLAIV---------TNGG 305

Query: 277 GLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKVAAAFKII 315
           G  +   D +  YG  PA                     N +D+ G A  ++   A +I 
Sbjct: 306 GPGVMAADTLAEYGLEPARIPDEIMTQLGEILPPYWSRGNPIDILGNATVERYTKALEIC 365

Query: 316 TSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
            +     GIL+ +    +   + + + ++  VK  ++ +     + G  +     ++ ++
Sbjct: 366 LASREFDGILVIMVPQDLTPPEEVARALVKLVKRKRVPV-FAAWMGGKRMAEAINILNQA 424

Query: 375 GLNVITAIDLDDAAQKIVHA 394
            +            ++ V A
Sbjct: 425 NIPTYETP------ERAVRA 438



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 31/236 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E Q+K +L  Y +PV    + +++         +  PL +         +        
Sbjct: 485 LSEMQSKEILAAYGIPVNDTRLAATIEEVIDLAAEMEMPLAM---------KLVSPDISH 535

Query: 63  PADSKGGVRVESSLKSVISDIREIL-GSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
            +D+ G      +   + +  + I+ G+     +    G  +             EL + 
Sbjct: 536 KSDANGVQLDLRNEDDLRAAFQRIMDGARAHNPEARILGVTLQTFIAHP----DFELLIG 591

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL-- 179
              D   G V    S  GG+  E +          L + PL  + +  +     +L L  
Sbjct: 592 SKTDDNFGPVICFGS--GGVFAEVLDDKA------LGLPPLNRLLARRMMEETRILPLLK 643

Query: 180 -----QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                         +L   L +   D  ++  L+INP +++KNG    +D++I  +
Sbjct: 644 GYRNSTPADLEKLEELLMRLSQLVIDFPEIVELDINP-VLVKNGEPCAVDARIRLE 698


>gi|146317693|ref|YP_001197405.1| phosphoribosylamine--glycine ligase [Streptococcus suis 05ZYH33]
 gi|146319884|ref|YP_001199595.1| phosphoribosylamine--glycine ligase [Streptococcus suis 98HAH33]
 gi|253750954|ref|YP_003024095.1| phosphoribosylamine-glycine ligase [Streptococcus suis SC84]
 gi|253752853|ref|YP_003025993.1| phosphoribosylamine-glycine ligase [Streptococcus suis P1/7]
 gi|253754678|ref|YP_003027818.1| phosphoribosylamine-glycine ligase [Streptococcus suis BM407]
 gi|145688499|gb|ABP89005.1| Phosphoribosylamine-glycine ligase [Streptococcus suis 05ZYH33]
 gi|145690690|gb|ABP91195.1| Phosphoribosylamine-glycine ligase [Streptococcus suis 98HAH33]
 gi|251815243|emb|CAZ50807.1| phosphoribosylamine-glycine ligase [Streptococcus suis SC84]
 gi|251817142|emb|CAZ54863.1| phosphoribosylamine-glycine ligase [Streptococcus suis BM407]
 gi|251819098|emb|CAR44139.1| phosphoribosylamine-glycine ligase [Streptococcus suis P1/7]
 gi|292557495|gb|ADE30496.1| Phosphoribosylglycinamide synthetase [Streptococcus suis GZ1]
 gi|319757203|gb|ADV69145.1| phosphoribosylamine--glycine ligase [Streptococcus suis JS14]
          Length = 420

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S+   A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +   RE+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAAREML----LDNKFGDSGARV---VIEEFL 189


>gi|158521438|ref|YP_001529308.1| phosphoribosylamine--glycine ligase [Desulfococcus oleovorans Hxd3]
 gi|158510264|gb|ABW67231.1| phosphoribosylamine--glycine ligase [Desulfococcus oleovorans Hxd3]
          Length = 591

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +L KYN+P A+G        A + +K L G + VVK+   A G+             
Sbjct: 106 AKEILLKYNIPTARGRCFDDYDEALAYLKELGGAV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V +S K     +R+I+   L     G  G   N V +E+  +     +++L 
Sbjct: 152 -GVFVCNSEKQAADALRQIMKDRLF----GDAG---NRVVIEERLEGEEASFIALT 199


>gi|115761337|ref|XP_001196395.1| PREDICTED: similar to ENSANGP00000012364 [Strongylocentrotus
           purpuratus]
 gi|115948420|ref|XP_799305.2| PREDICTED: similar to ENSANGP00000012364 [Strongylocentrotus
           purpuratus]
          Length = 588

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 37/230 (16%)

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD-- 244
                 +L K + D   +LLEINPL+++   ++  LD     D  A     D     +  
Sbjct: 36  VASFIVDLVKMYQDLHFTLLEINPLVVLD--KVYPLDLAAMLDTKATPVCKDRWGRVEFP 93

Query: 245 ------VSEEDSREIE-----AKQHNLSYIALDGNIGCMVNGAGLAMATMDI--IKLYGG 291
                  SEE+    E          L+ +     I   ++G G+++   D   +     
Sbjct: 94  PPFGRLPSEEERFISELEIGTPANVKLTVLNRKARIWSAISGGGISLLLGDTAMVHECSH 153

Query: 292 APANFLDVGGGADQDKVA----AAFKIITSDSSVKGILINIFG-GIMRCDVLVK------ 340
               +    G  +  ++         ++ ++    G ++      I    ++        
Sbjct: 154 EIGCYAQFSGPLNPTQMYGFTKTVLDLMLAEKHPDGKVLVTGSQAIDVTTLVANKIGPGA 213

Query: 341 GILSAVKE-----VKINIPLVMR----LEGANVDIGNRLIAESGLNVITA 381
           G+++A++E     +K  + L +R    + GA  +   R +A  G+ V   
Sbjct: 214 GMMNALEEYKDQLIKHKVSLYIRTTVGIVGAENEKLPRTLANLGIPVYVF 263


>gi|41353035|gb|AAS01139.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D +   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTVADLGQVEELANYGEYSGNPSRTETREYVKTVFDLMTREKHESG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           K  ++ I G I     + K   GI+ A+KE       + + + +R  G N 
Sbjct: 61  KPKILIIGGAIANFTDVAKTFDGIIDAMKEYADKLKDVGVKVYVRRGGPNY 111


>gi|149173091|ref|ZP_01851722.1| Cyanophycin synthetase [Planctomyces maris DSM 8797]
 gi|148847897|gb|EDL62229.1| Cyanophycin synthetase [Planctomyces maris DSM 8797]
          Length = 885

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 3/103 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LLR+  +P  +GV++SS+   + A + +  P+  +K ++   GRG         + + 
Sbjct: 219 KLLLRQAGIPAPEGVLVSSLSEIKQAAERIGYPV-AIKPEVGNHGRGITAQVCNVKELET 277

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
                 ++   +   + + G     +     G  V     E  
Sbjct: 278 AFMSAWTVCESVIVEQSLTG--FDFRVLVINGKLVAAALREPA 318


>gi|302543244|ref|ZP_07295586.1| 6-carboxyhexanoate-CoA ligase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460862|gb|EFL23955.1| 6-carboxyhexanoate-CoA ligase [Streptomyces himastatinicus ATCC
           53653]
          Length = 227

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 39/235 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+ +  S      + +     L
Sbjct: 14  LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVVMKASAPQLAHKTELGLVRL 73

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       S   V    RE+      T      G  ++ V V    +   E+ + +
Sbjct: 74  GLT---------SASQVRDTYREL------TDIARYEGVELDGVLVCQMVERGVEMVVGV 118

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G    +    GG+ +E +          + + P      +   ++   L     
Sbjct: 119 THDSLFGPTVTVG--IGGVLVEVLRDTA------VRVPPFG---EDQARAMLAELRGHAL 167

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                           ++   + +   +    L E  +NPL+++  G+    LD+
Sbjct: 168 LDGVRGAPPSDVDALVEVVLRVQRMALELGDQLAELDVNPLMVLPRGQGAVALDA 222


>gi|242398198|ref|YP_002993622.1| Acetyl-CoA synthetase II (ACSII, ADP-forming) and succinyl-CoA
           synthetase (SCS, ADP-forming), subunit beta
           [Thermococcus sibiricus MM 739]
 gi|242264591|gb|ACS89273.1| Acetyl-CoA synthetase II (ACSII, ADP-forming) and succinyl-CoA
           synthetase (SCS, ADP-forming), subunit beta
           [Thermococcus sibiricus MM 739]
          Length = 235

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 79/230 (34%), Gaps = 23/230 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKEL 62
           EY+AK +L+ Y++P+ +  +  ++  A      +  P+ +  +  QI             
Sbjct: 22  EYEAKQVLKAYDLPLPEEKLAKNLDEAIKYANEIGYPVVMKLMSPQIL-----------H 70

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+K  +    + + +     EI  +     +     + +  V +       RE+ + +
Sbjct: 71  KSDAKVVMLKIKNDEELKQKWEEIHEN----ARKYKPDAEILGVLIAPMLKPGREIIIGV 126

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQG 181
             D   G         GG+ +E +     + I     D    + S     +         
Sbjct: 127 TEDPQFGHALMFG--LGGIFVEILKDVTFRIIPIEEKDAWAMIKSIKGYPILAGARGEAP 184

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDSKISF 228
                  D+   + +   D    + E+  NP+ +   G    ++D++I  
Sbjct: 185 ADMKAIVDMMLKVSQLIDDLKDYIKEMDLNPIFVYPEGEGAVIVDARIIL 234


>gi|239906640|ref|YP_002953381.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1]
 gi|239796506|dbj|BAH75495.1| CoA-binding domain protein [Desulfovibrio magneticus RS-1]
          Length = 701

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 84/232 (36%), Gaps = 29/232 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+QA+ +LR YN+P     +  S   A +A   +  P+ V+K             +    
Sbjct: 489 EFQAQEVLRAYNLPTPNTGLARSSDEAVAAADKIGYPV-VLKI---------ASPQISHK 538

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLSLL 123
              GGV+V  +    + +            Q     + +    V++ A    +E+ +   
Sbjct: 539 SDVGGVKVNLADAEAVRNA---FFDITARAQRMRPEAYIAGCLVQEMAPKGCKEIIIGFK 595

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D   G    +    GG+ +E + KD   ++  L  D   G+    +  +   + L+G  
Sbjct: 596 RDDQFG-PLLMFGL-GGIYVE-ILKDIAFRLAPLGRDDAKGI----IREIKSYMLLKGVR 648

Query: 184 RIDGG------DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                      D+   + +   D  ++   E NP+++     +   D +I+ 
Sbjct: 649 GEQPVNFQAIEDILITMSELALDFPEIVEAEFNPVLVNAEKAVVA-DVRITL 699



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 80/211 (37%), Gaps = 32/211 (15%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRV--------LDSKISFDD--NALYRH------LDIQE 241
           F ++   + +  P+I++K+G              +    D    A +R        D+  
Sbjct: 226 FIEQAAKVTQEKPVIMIKSGTTTAGAKAASSHTGAIAGSDQAYTAAFRKTGVIRANDMAT 285

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMV---------NGAGLAMATMDIIKLYGGA 292
           L D+++  S +   +   L  +   G  G +          N A L+ +T++ +K +   
Sbjct: 286 LFDLAQAFSTQPLPEGPGLCIVTNSGGPGILAADATEKSSLNMARLSNSTIERMKEFLPP 345

Query: 293 PA---NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI-MRCDVLVKGILSAVKE 348
            A   N +D+ G A  ++     +++  D  V  IL+ +            + I+   K 
Sbjct: 346 YASLYNPVDLIGDAPAERYRKTLEVVIDDPQVHSILVLLTPTASAEIIETAEAIIEVSK- 404

Query: 349 VKINIPLVM-RLEGANVDIGNRLIAESGLNV 378
            K   P+ +  + G     G +++ ++G+  
Sbjct: 405 -KTKKPIFVNYMGGQRTRPGQKMLTDAGIPC 434


>gi|115941024|ref|XP_001185699.1| PREDICTED: similar to Succinate-CoA ligase, ADP-forming, beta
           subunit, partial [Strongylocentrotus purpuratus]
          Length = 38

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/38 (76%), Positives = 32/38 (84%)

Query: 283 MDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSS 320
           MDIIKL+GG PANFLDVGGGA  D+V  AFK+ITSDS 
Sbjct: 1   MDIIKLHGGTPANFLDVGGGATADQVKQAFKLITSDSK 38


>gi|16519926|ref|NP_444046.1| conserved putative dicarboxylase [Sinorhizobium fredii NGR234]
 gi|2493314|sp|P55641|Y4RH_RHISN RecName: Full=Uncharacterized protein y4rH
 gi|2182606|gb|AAB91833.1| conserved putative dicarboxylase [Sinorhizobium fredii NGR234]
          Length = 478

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 25/228 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK- 67
           + +L    VPV      ++    +     +  P  V+K  + +G RG    ++    ++ 
Sbjct: 174 RQVLAAAGVPVPGYRSATTAAEVQCVAAEIGLP-AVLKPAVGSGSRGVRLCRDARELAEH 232

Query: 68  -----GGVRVESSLKSVI--------SDIREILGSTLITKQTGPTGSRVNCVY--VEDGA 112
                GG  +  S   V+          I EI+G  +I       G   + V+  +   A
Sbjct: 233 TDYLLGGKHMWRSSPEVLVEQFVDGPHYIAEIMGDEVIGIGITEYGPPPHFVFRQLTFPA 292

Query: 113 DILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVA 171
            +  E Y   + D     +  +    G  +IE    +    +  + ++P L G     + 
Sbjct: 293 PLTDEQYERAV-DVVQRCLRALGLGWGPTNIEFRWTEVGPVV--IEVNPRLAGNPDPQLV 349

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
            L   ++L G+          NL K    +         LI  ++G L
Sbjct: 350 QLAFDVDLIGEHIKLAIGEQCNLSK----RQSRTATARSLIADRDGTL 393


>gi|301059526|ref|ZP_07200439.1| putative acetyl coenzyme A synthetase (ADP forming), alpha domain
           protein [delta proteobacterium NaphS2]
 gi|300446421|gb|EFK10273.1| putative acetyl coenzyme A synthetase (ADP forming), alpha domain
           protein [delta proteobacterium NaphS2]
          Length = 895

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKV 308
           G + NG G  +   D +  +   PA                     N +D+ G A  ++ 
Sbjct: 304 GIITNGGGPGVMAADALSAFDLEPATLAPETLQKLDSVLPPFWSRSNPMDILGDAPPERW 363

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPL----VMRLEGANV 364
             A  I+ S   +   L+ IF  + +       +  AV E+  + P      + + G ++
Sbjct: 364 RQAMDIVLSAREI-AALVIIF--VPQSLSSGTAVSRAVSELVRSRPCPPIFAVWMGGQSI 420

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           D G R++ + G+   T    + A    VH 
Sbjct: 421 DEGRRILNKEGIP--TYDTPERAIAAFVHL 448



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 27/233 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K L   Y +PV    +  +   A      +  P+  +K           R    
Sbjct: 491 LTEIESKNLFDAYGIPVVPTELAKNADQAVHLADHMGFPV-AMKIH--------SRDITH 541

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+ G      S K V +   +I    + + Q     + ++ V V+  A I  +  + L
Sbjct: 542 KSDASGVQLNLRSEKDVRAAFDQI----VQSAQAYNPEASIDGVAVQPMAGI-HDYEVIL 596

Query: 123 LVDR-TSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
              R        I    G M     D         + + + +I+            L   
Sbjct: 597 GSKRDPLFGPVLIFGMGGIMTEILKDRAIALPPLNRLLARRIIESTK-----VYRMLAGY 651

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                       +    L +   D  ++  L+INP+I+  + R+  +D ++  
Sbjct: 652 RNKPPARLDLLEEALIRLSQMVSDFPEIVELDINPMILQAD-RICAVDGRVRV 703


>gi|146341824|ref|YP_001206872.1| hypothetical protein BRADO4953 [Bradyrhizobium sp. ORS278]
 gi|146194630|emb|CAL78655.1| conserved hypothetical protein with a putative CoA binding domain;
           putative succinyl-CoA (or acyl-CoA) synthetase
           [Bradyrhizobium sp. ORS278]
          Length = 713

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 84/260 (32%), Gaps = 22/260 (8%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           Y +PV K  +  S   A      +  P+   +V   I               ++ G +  
Sbjct: 39  YGIPVPKEGLAKSAGDAAKLAGDMGFPVVMKIVSPDIL-----------HKTEAGGVIVG 87

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
             +          IL +     +     +++  + V+       E+ +  + D + G   
Sbjct: 88  VKTADDAQKAYETILAN----AKKYKADAKIEGIQVQQMLTGGTEVIVGSITDGSFGK-- 141

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLF 191
            +A   GG+ +E +     +       D L  +       +   +      +R    D+ 
Sbjct: 142 LVAFGLGGVLVEVLKDVTFRLAPATKDDALSMLDGIQAHEMLKGVRGGDAVSREALADVI 201

Query: 192 PNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
             + K   D  ++  L++NP+   KNG +   D +I  D +   R         V+  + 
Sbjct: 202 VKVSKLVSDFPEIVELDLNPVFATKNGAI-AADVRIVVDFDYKPRPAPRSNEEIVTAMNR 260

Query: 251 REIEAKQHNLSYIALDGNIG 270
                    +   A DG IG
Sbjct: 261 IMKPQAVAVIGASAEDGKIG 280


>gi|41353031|gb|AAS01137.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA----FKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTTGETKFYAETIFDLVTRYEDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI+ A++         N  + +R  G N 
Sbjct: 61  KVLIIGGAIANFTDVAKTFTGIIQALENYADKLKAHNTKIYVRRGGPNY 109


>gi|160947597|ref|ZP_02094764.1| hypothetical protein PEPMIC_01532 [Parvimonas micra ATCC 33270]
 gi|158446731|gb|EDP23726.1| hypothetical protein PEPMIC_01532 [Parvimonas micra ATCC 33270]
          Length = 413

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 22/117 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KYNVP AK   I S+   + AI+    P+ V+K+     G+             
Sbjct: 104 AKKFMKKYNVPTAKYETIKSIEEGKKAIENFSYPI-VIKADGLCAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GVR+ ++   V+   +E+    +        G     V +E+         L  + 
Sbjct: 150 -GVRICNTKDEVLDYFKELFEDKIF-------GKEGTTVVIEEFLKGKEASLLCFVS 198


>gi|170739807|ref|YP_001768462.1| CoA-binding domain-containing protein [Methylobacterium sp. 4-46]
 gi|168194081|gb|ACA16028.1| CoA-binding domain protein [Methylobacterium sp. 4-46]
          Length = 722

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 75/199 (37%), Gaps = 17/199 (8%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y +PV K  V +S   A  A +++  P+ V+K               L     GGV V  
Sbjct: 48  YGIPVPKEAVATSAQDAVRAAESMGFPV-VLKIV---------SPDILHKTEAGGVMVGL 97

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S    ++   E +   L   +     +R++ V ++       E+ +  + D + G    +
Sbjct: 98  SSAQAVAQGYETI---LANAKRYKADARIDGVQIQQMLAGGTEVIVGAVTDGSFGK--LV 152

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
           A   GG+ +E +     +       D L  +     A +   +      +R    D+   
Sbjct: 153 AFGLGGVLVEVLKDITFRLAPATRDDALSMLDGIQAAEMLRGVRGADPVSREALADIIVK 212

Query: 194 LYKAFCDK-DMSLLEINPL 211
           + +   D  +++ L++NP+
Sbjct: 213 VSQLVTDFPEIAELDLNPV 231


>gi|145588856|ref|YP_001155453.1| cyanophycin synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047262|gb|ABP33889.1| cyanophycin synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 730

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VP+ +G  ++S   A  A + +  P+ V       G  G+G F  L    + 
Sbjct: 230 KSLLASAGVPIPEGRTVTSPDDAWEAAQDIGLPVVVKPID---GNHGRGVFINLYTQQEI 286

Query: 69  GVRVESSLKSVISDIREI 86
                 ++      + E 
Sbjct: 287 EAAYAVAIDEGSEVLVER 304


>gi|325686334|gb|EGD28364.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK72]
          Length = 419

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|302390048|ref|YP_003825869.1| phosphoribosylamine--glycine ligase [Thermosediminibacter oceani
           DSM 16646]
 gi|302200676|gb|ADL08246.1| phosphoribosylamine--glycine ligase [Thermosediminibacter oceani
           DSM 16646]
          Length = 417

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A   V      A   I+    P  V+K++  A G+             
Sbjct: 106 AKELMKKYGIPTADYRVFDDPEEAGRYIREAETP-LVIKAEGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V    +  +  ++ I    +     G +G RV    +E+  +  RE+ +    D  
Sbjct: 152 -GVMVAREREEALDAVKSI----MKDGIFGDSGRRV---VIEEFLE-GREVTVLAFCDGV 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 TAVPM 207


>gi|34592243|gb|AAQ76318.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             M  G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMGAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  RKKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|160901140|ref|YP_001566722.1| cyanophycin synthetase [Delftia acidovorans SPH-1]
 gi|160366724|gb|ABX38337.1| cyanophycin synthetase [Delftia acidovorans SPH-1]
          Length = 730

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 71/227 (31%), Gaps = 29/227 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G ++ S   A    + +  P+ V  S    G   +G   +L  ++  
Sbjct: 225 KRLLAACGVPVPEGQIVHSPEEAWEVAQDIGFPVTVKPSD---GNHARGVTLDLRDEADI 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVE-DGADILRELYLSL 122
                 +       I E        +     G  V       V V  +G   LREL +++
Sbjct: 282 KAAFALAQPEGSDVIVERFIDGTEHRILVVGGKVVAACRGETVSVAGNGKSTLREL-VAV 340

Query: 123 LVDRTSGMVA------FIASTQGGMDIE-EVAKDYPQKIF------------KLLIDPLI 163
           +               +I      + +E +     P  I              + ID   
Sbjct: 341 VNQDPRRGPEQEYPLDWINLEAPAVKLELKRQNVTPDTIPAQGTSVLLQRNGNMAIDCTD 400

Query: 164 GVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
            V  E         ++ G        +  ++ +   ++  ++LE+N 
Sbjct: 401 EVHPEVAYMATLAAKIVGLDIAGMDMILQDVSRPMKEQGGAILEVNA 447


>gi|41352975|gb|AAS01109.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHKDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI++A ++      +    + +R  G N 
Sbjct: 61  KILIIGGAIANFTDVAKTFAGIINAFEKYADKLKEHKTKIYVRRGGPNY 109


>gi|324995761|gb|EGC27672.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK678]
          Length = 419

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|297538841|ref|YP_003674610.1| CoA-binding domain-containing protein [Methylotenera sp. 301]
 gi|297258188|gb|ADI30033.1| CoA-binding domain protein [Methylotenera sp. 301]
          Length = 892

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 88/229 (38%), Gaps = 20/229 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E ++KALL  +++PVA  +V  S + A    + L  P+ +         +         +
Sbjct: 492 EMESKALLSAFHIPVAHTMVARSPNEALLIAQQLGFPVAM---------KINSPDITHKS 542

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYLSLL 123
           D  G V   ++ + + S    I+ +    +      G  +  + V+      REL + + 
Sbjct: 543 DVGGVVLNLANAQEIRSAYHSIIENVKSKRPNAHINGISIQPMIVKPN---GRELMVGVT 599

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQK--IFKLLIDPLIGVTSEDVASLCDMLELQG 181
            D   G    I    GG  +E +A        +   L+  LI  T      L     +  
Sbjct: 600 NDPVFG--PIITFGAGGTTVEIIADRSVALPPLNNFLVKDLINNT-HVAKMLGTFRNMPP 656

Query: 182 QARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFD 229
                   +   + +  C+  M + ++INPLI+ +NG +   D++I  +
Sbjct: 657 VNMEALESVMLRVSEMVCELPMLMEMDINPLILDENG-VLAADARIMVE 704


>gi|156743296|ref|YP_001433425.1| carbamoyl-phosphate synthase large subunit [Roseiflexus
           castenholzii DSM 13941]
 gi|156234624|gb|ABU59407.1| carbamoyl-phosphate synthase, large subunit [Roseiflexus
           castenholzii DSM 13941]
          Length = 1112

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 37/175 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V  G  +S+V  A  A   +  P+ V  S    G            
Sbjct: 129 RELFKRAMIDAGLRVPLGETVSTVDQALEAAARIGYPVLVRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S GGV    S   +       L ++            V  V +E      +E  L ++ 
Sbjct: 177 -SGGGV--AYSEAQLREIADRGLRAS-----------PVTQVLIEQSVLGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           DR    V           IE +          + I P + +T  +   L +M ++
Sbjct: 223 DRMDNFVVV-------CSIENLDPMGVHTGDSITIAPTMTLTDREYQRLREMAKI 270


>gi|323350867|ref|ZP_08086525.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis VMC66]
 gi|322122849|gb|EFX94555.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis VMC66]
          Length = 419

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSEFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|219852895|ref|YP_002467327.1| carbamoyl phosphate synthase large subunit [Methanosphaerula
           palustris E1-9c]
 gi|254813601|sp|B8GEA3|CARB_METPE RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|219547154|gb|ACL17604.1| carbamoyl-phosphate synthase, large subunit [Methanosphaerula
           palustris E1-9c]
          Length = 1056

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 75/222 (33%), Gaps = 49/222 (22%)

Query: 6   YQA------KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           YQ       KAL++K   PV + ++++ +      I+ +  P+ +  +    G       
Sbjct: 122 YQGEDREKFKALMQKIGEPVPRSMILNRLDQLGEVIEKVGLPVIIRPAYTLGG------- 174

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                    G  +  ++  +   +             G   SR++ V +E+     +EL 
Sbjct: 175 --------AGGGIAHTVDELKRIVE-----------IGLQRSRIHQVLIEESVMGWKELE 215

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCD 175
             ++  R +     I  +   +D   +     + +    I    D    +       +  
Sbjct: 216 FEVM--RDAKDTCVIICSMENVDP--MGVHTGESVVVAPILTLRDDEYQMMRSASIKIIR 271

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L++QG   I           AF D D  ++E+NP +   + 
Sbjct: 272 ALDVQGGCNIQF---------AFQDGDYRVIEVNPRVSRSSA 304


>gi|41353001|gb|AAS01122.1| AclB [uncultured prokaryote]
          Length = 108

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 14/108 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGAD-QDKVAAA---FKIITSDSSVKG 323
             MV G G ++   D I  + G    AN+ +  GG    +    A   F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADFAGVKDLANYGEYSGGPTTAETEFYAETIFDLMTRHKDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGAN 363
            ++ I G I     + K   GI++A+++    +      + +R  G N
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIINALEKYADKLKEHGTKIYVRRGGPN 108


>gi|218886815|ref|YP_002436136.1| phosphoribosylamine--glycine ligase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757769|gb|ACL08668.1| phosphoribosylamine/glycine ligase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 425

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 77/229 (33%), Gaps = 41/229 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R   VP A   V  +  AA + I+    P+ VVK+   A G+             
Sbjct: 106 AKEVMRAAGVPTAAFGVFDTADAARAYIRQNGAPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++   +  + ++    ++ +  G  G   + V VE         +L  L D  
Sbjct: 152 -GVVVARTVDEALEAVDDM----MVRRAFGDAG---DRVVVESALAGEEASFLC-LCDGE 202

Query: 128 SGMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           + +    A               GGM     A   P+  ++ +ID +I      +  L  
Sbjct: 203 TVLPLPSAQDHKAVFDNDEGPNTGGMGAYSPAPVLPETRYEEMIDLVI---RPVLRELIK 259

Query: 176 MLELQGQARIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGRLRVL 222
                    +  G +         +        E  PL++  +G L  +
Sbjct: 260 R-GHPFTGVLYAGLMMTADGPMVLEFNTRFGDPECQPLLMRLDGDLAAI 307


>gi|34592209|gb|AAQ76301.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEECADKMKDVGVKIYVRRGGPNY 111


>gi|288575091|ref|ZP_06393448.1| phosphoribosylamine/glycine ligase [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570832|gb|EFC92389.1| phosphoribosylamine/glycine ligase [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 426

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A   +  S+  A  A++    P Y+VK+   A G  KG F        
Sbjct: 106 SKEFMARHGIPTAPFKICRSMDEAREALEE-RKPPYIVKADGLAAG--KGVFISDDLS-- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
              +   S + ++    +  G TL+  + G TG  V+ + + DG
Sbjct: 161 ---QALDSCEELLDGSLDEAGKTLVV-ENGLTGREVSVMIITDG 200


>gi|312112471|ref|YP_003990787.1| phosphoribosylamine/glycine ligase [Geobacillus sp. Y4.1MC1]
 gi|311217572|gb|ADP76176.1| phosphoribosylamine/glycine ligase [Geobacillus sp. Y4.1MC1]
          Length = 430

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 39/201 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++KY +P A+     S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKEMMKKYGIPTAEHAAFISYEEAKAYVEKKGVPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L   +      L   ++ K+ G  G     V VE+  +   E  L   V   
Sbjct: 152 -GVTVAATLPEAMEA----LRMMMVEKRFGAAG---ERVVVEEYLE-GEEFSLMAFVHGE 202

Query: 128 SGMVAFIASTQ------------GGMD----IEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                 IA               GGM     + +++ +        +I+P+    + +  
Sbjct: 203 RVYPMVIAQDHKRAYDNDQGPNTGGMGAYSPVPQISAETVDAALSQIIEPMAKALAAEGR 262

Query: 172 SLCDMLELQGQARIDGGDLFP 192
               +L     A   G  +  
Sbjct: 263 PFTGVLYAGLMATKQGPKVIE 283


>gi|34592255|gb|AAQ76324.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQA 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|313109987|ref|ZP_07795912.1| putative acyl-CoA synthetase [Pseudomonas aeruginosa 39016]
 gi|310882414|gb|EFQ41008.1| putative acyl-CoA synthetase [Pseudomonas aeruginosa 39016]
          Length = 696

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  L+ + +P+  G V+S+   A  A   L  P  V+K+   A           
Sbjct: 481 LDEWQSKQALKSFGLPLPPG-VLSTPGQAREAALDLGFP-LVLKAVSAAL---------P 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                GGV +    ++ +     +        +  P       V +E  A   L EL + 
Sbjct: 530 HKTEAGGVALGLRNEAALEAA--LFDMRESLARHAPQ-LVFERVLLERMAGAPLAELIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 587 VKREEGFGLALVIGA--GGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRP 644

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
             +          + +  C+    LLE  +NPL+    G L  +D+ I  
Sbjct: 645 AVSMEALVAAIRAVAEFACEHAERLLELDVNPLLADAEGAL-AVDALIRL 693


>gi|284030093|ref|YP_003380024.1| CoA-binding domain-containing protein [Kribbella flavida DSM 17836]
 gi|283809386|gb|ADB31225.1| CoA-binding domain protein [Kribbella flavida DSM 17836]
          Length = 714

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 80/239 (33%), Gaps = 37/239 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +AK +   Y +P     + ++   A S    +  P+ V+K               L    
Sbjct: 27  EAKQVADAYGIPTPGEGLATTAEEAASLAAGIGFPV-VLKIV---------SPDILHKTD 76

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT--GSRVNCVYVEDGADILRELYLSLLV 124
            GGV V            E + +     Q      G +V  + V  G   ++E+ +  + 
Sbjct: 77  AGGVVVGVDSAEAAVAAYERIVTNAKAYQADARISGVQVQKMLVTGGD--VQEVIVGAVT 134

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML------- 177
           D T G +       GG+ +E +     +         L  VT ++  S+ D +       
Sbjct: 135 DPTFGKIVAFG--LGGVLVEVLKDVTFR---------LAPVTGDEARSMVDGISAHEMLN 183

Query: 178 ---ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                Q   +     +   +     D    + +++NP++   +G    +D +I  D  A
Sbjct: 184 GVRGAQPVDKDALAAVIQQVSDLVEDFPQFAEVDLNPVLAGPDG-ATAVDFRIIVDAEA 241


>gi|167043891|gb|ABZ08579.1| putative CoA-binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG3H9]
          Length = 700

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 85/219 (38%), Gaps = 20/219 (9%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            Y  P+ K ++  +   A  +   +   + +               + +     GGV+V 
Sbjct: 498 SYGFPLPKNILAKTEDEAVESANNIGYSVVM----------KIASPQIVHKSDAGGVKVN 547

Query: 74  -SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
            ++ + V +  +EI+G+     +   + + +  V V +     +E+ +   ++   G V 
Sbjct: 548 LTNDEEVRNAFKEIVGN----AKKYDSNAEIKGVLVVEMVKGGKEMIIGSKLEPGFGPVL 603

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLF 191
            +    GG+ +E +     +       +    ++S     L + +   +        +  
Sbjct: 604 MLG--MGGIYVEILKDVTFRLAPVTDQEANDMISSIKTKKLLEGVRGEKPSDVEKLSECI 661

Query: 192 PNLYKAFCD-KDMSLLEINPLIIMKNGR-LRVLDSKISF 228
             L +   D K++  L++NP+++M+ G   ++LD +I  
Sbjct: 662 QRLSQLVTDFKEIKELDMNPVLVMEKGEGCKILDVRIGI 700


>gi|306481127|emb|CBN08509.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 111

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASLVYADTIADMAGIDDLANYGEYSGGPTTGETKFYTETLFDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E      +++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDKLKEVDTKIYVRRGGPNY 111


>gi|34592237|gb|AAQ76315.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 110

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N
Sbjct: 61  RKKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPN 110


>gi|288930712|ref|YP_003434772.1| carbamoyl-phosphate synthase, large subunit [Ferroglobus placidus
           DSM 10642]
 gi|288892960|gb|ADC64497.1| carbamoyl-phosphate synthase, large subunit [Ferroglobus placidus
           DSM 10642]
          Length = 1081

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 37/173 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      + V +  +  SV  A +  + L  P+ V  +    G            
Sbjct: 129 RDLFKKAMENIGLEVPRSEIAESVSDALTIAEELGYPVVVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +   +R+ L  ++           ++ V +E+     +E  L ++ 
Sbjct: 177 -TGGGI--AYNREELKEIVRKGLELSM-----------IHQVLIEESVIGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           D+ +  V  I S      IE            + + P   +T  +   L D  
Sbjct: 223 DK-ADNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDYEYQRLRDAA 268



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            + RK  +P  +  +  SV  A+   K +  P+ V  S +  G
Sbjct: 681 EICRKLGIPQPENGIAFSVEEAKEVAKKIGYPVLVRPSYVLGG 723


>gi|187926155|ref|YP_001892500.1| cyanophycin synthetase [Ralstonia pickettii 12J]
 gi|241665643|ref|YP_002984002.1| cyanophycin synthetase [Ralstonia pickettii 12D]
 gi|187727909|gb|ACD29073.1| cyanophycin synthetase [Ralstonia pickettii 12J]
 gi|240867670|gb|ACS65330.1| cyanophycin synthetase [Ralstonia pickettii 12D]
          Length = 886

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL+   VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 224 KSLLQSCGVPVPEGRMVDSAEDAWDAAEDIGVPV-VVKP--YDGNHGRGVFTNLMTREEV 280

Query: 69  GVRVESSLKS 78
                 +++ 
Sbjct: 281 ETAYAVAIEE 290


>gi|147919944|ref|YP_686303.1| acetyl-coa synthetase (ADP-forming), beta subunit [uncultured
           methanogenic archaeon RC-I]
 gi|110621699|emb|CAJ36977.1| acetyl-coa synthetase (ADP-forming), beta subunit [uncultured
           methanogenic archaeon RC-I]
          Length = 218

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 25/232 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E +AK LL  Y + +  G  +SS   A  A   L  P+ +   ++ +          L
Sbjct: 8   LNELEAKELLASYGITINAGQAVSSPTEAADAAAKLGFPVAL---KVLSDKISHKSDLGL 64

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            A +             I      L          P  + V       G    RE+ +  
Sbjct: 65  VALNIASADCARGAYDRIITAARALD---------PEATAVVQTMAAPG----REVIVGA 111

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI---FKLLIDPLIGVTSEDVASLCDMLEL 179
             D   G +       GG+ +E       +      +  I+ +  +       L +    
Sbjct: 112 KRDPQFGPIVLFG--MGGVFVEVFKDVSIRVAPVDHQTAIEMIKEIKGY--RMLTEFRGQ 167

Query: 180 QGQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           +        D+  N+ +   + +D+  L+ NP++  ++G +  +D+++   D
Sbjct: 168 KSVDIDALADVIVNISRLIMEREDILELDANPVMAYESGAI-AVDARVLLKD 218


>gi|194288896|ref|YP_002004803.1| cyanophycin synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|193222731|emb|CAQ68734.1| Cyanophycin synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 877

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 224 KSLLESCGVPVPEGRLVESPEDAWDAAEDIGVPV-VVKP--YDGNHGRGVFTNLMTREEV 280

Query: 69  GVRVESSLKS 78
                 ++  
Sbjct: 281 ETAYGVAIDE 290


>gi|41352983|gb|AAS01113.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I  + G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADFAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHKDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGANV 364
            ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIIKAFEKYADKLKEHGTKIYVRRGGPNY 109


>gi|92117458|ref|YP_577187.1| GCN5-related N-acetyltransferase [Nitrobacter hamburgensis X14]
 gi|91800352|gb|ABE62727.1| GCN5-related N-acetyltransferase [Nitrobacter hamburgensis X14]
          Length = 897

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 102/311 (32%), Gaps = 52/311 (16%)

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S            + S  G +    V     + +    I   + V  +    + D+LE  
Sbjct: 144 SFAAHMPRAGNLALISQSGAIATGMVDWAARRNVGFSGI---VSVGDQLDVDIADLLEFF 200

Query: 181 GQARIDGGDLF----PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI---------S 227
                    L         + F     +   + P++++K+GR     +K           
Sbjct: 201 ALDTDTKAILMYIEAVKDARKFMSAARAAARVKPVVVVKSGR-MAQGAKAAATHTGALAG 259

Query: 228 FD--DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDI 285
            D   +A +R   I  + D+ E         +   ++      +  + NG G+ +  +D 
Sbjct: 260 SDAVYDAAFRRAGILRVFDLRELFDCAETLSRVKFAFGK---RLAMLTNGGGIGVLAVDR 316

Query: 286 IKLYGGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGI 324
           +   GG PA                     N +D+ G AD  +  AA +I+  D     +
Sbjct: 317 LIELGGIPAALNPVVKQQLDAVLPVTWSGSNPVDIIGDADPARYVAALEILLEDGDSDAV 376

Query: 325 LI-NIFGGIMRCDVLVKGILSAV-----KEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           L+ N+   I     +   +  AV     K      P++    GA+ +  +R   ++G+  
Sbjct: 377 LVMNVQTAIADSGAIATAVTRAVDADRRKHTVSAKPVLAVWVGAD-EKISRTFTDAGIPD 435

Query: 379 ITAIDLDDAAQ 389
               D  DA +
Sbjct: 436 FPTED--DAVR 444


>gi|34592241|gb|AAQ76317.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFTGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|291570715|dbj|BAI92987.1| acetyl-CoA synthetase [Arthrospira platensis NIES-39]
          Length = 916

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 88/237 (37%), Gaps = 31/237 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K LL  Y +PV    + S+V AA +A + +  P+ +                  
Sbjct: 509 LTEFESKELLALYGIPVVDTRMASTVDAALAAAEAIGYPVAL----------KLLSETIT 558

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGV++  +    +    E + S++  K        V    V++   +   EL + 
Sbjct: 559 HKTDVGGVKLNLTSAEEVQAAYEAIASSVAEKVGPEHFQGVT---VQEMLKLDGYELIIG 615

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVASLC 174
             +D   G    +  T G   + EV KD       L + PL       +   ++   +L 
Sbjct: 616 SSLDPQFG-PVLLFGTGG--QLVEVFKDR-----TLALPPLNTTLARRMMEQTKIYKALL 667

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +             L         ++  +  ++INPL+  ++ RL  LD+++   D
Sbjct: 668 GVRGRPPVDMDALEQLMVRFSHIVVEQPWIKEIDINPLVASED-RLVALDARVVLHD 723


>gi|85539447|emb|CAJ57339.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++  + +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYSVKMKDVGTRIYVRRGGPNY 112


>gi|117924405|ref|YP_865022.1| CoA-binding domain-containing protein [Magnetococcus sp. MC-1]
 gi|117608161|gb|ABK43616.1| CoA-binding domain protein [Magnetococcus sp. MC-1]
          Length = 706

 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 18/230 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +H+ +A  ++  Y +PV K  + +S+   E  +  +  P+ +                 +
Sbjct: 489 LHQAEAGQIMAAYGLPVLKNGLATSLEDLERVLDEVGLPVAM----------KISSPDIV 538

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV ++   +      RE   + +   +     +R+  VYVE  A    E+ L  
Sbjct: 539 HKSDAGGVMIKLKTREA---AREAFTTIVANAKAYDANARITGVYVEQMAKKGVEVILGS 595

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D   G +       GG+ +E       +      I     V       +   +     
Sbjct: 596 SRDPKFGPLVMFG--LGGVMVEVFKDVTFRLAPMWEISAERMVQEVKAYKILQGVRGNPA 653

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVL-DSKISFD 229
                  +    + +   D   +  L+INP+I+   G    + D ++  +
Sbjct: 654 SDVESIREAILRVSQMLTDNPQIQELDINPMIVHAEGLGSAVADCRMVIE 703


>gi|34592187|gb|AAQ76290.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592193|gb|AAQ76293.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592195|gb|AAQ76294.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592197|gb|AAQ76295.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592201|gb|AAQ76297.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592203|gb|AAQ76298.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592219|gb|AAQ76306.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592221|gb|AAQ76307.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592223|gb|AAQ76308.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592225|gb|AAQ76309.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592235|gb|AAQ76314.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|222869522|gb|EEF06653.1| predicted protein [Populus trichocarpa]
          Length = 393

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G ++ S   A    + +  P+ V
Sbjct: 225 KRLLAACGVPVPEGQIVHSPEEAWEVAQDIGFPVTV 260


>gi|34592215|gb|AAQ76304.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 109

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA----FKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTTGETKFYAETIFDLMTRYEDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI+ A++         N  + +R  G N 
Sbjct: 61  KVLIIGGAIANFTDVAKTFTGIIQALENYADKLKAHNTKIYVRRGGPNY 109


>gi|29830692|ref|NP_825326.1| phosphoribosylamine--glycine ligase [Streptomyces avermitilis
           MA-4680]
 gi|29607804|dbj|BAC71861.1| putative phosphoribosylglycinamide synthetase [Streptomyces
           avermitilis MA-4680]
          Length = 417

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++   AE A+     P YVVK    A G+             
Sbjct: 106 AKDVMAGAGVPTARSYVCTTPEEAEEALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V S L +  +  R                     V +E+  D
Sbjct: 152 -GVVVTSDLDAAKAHARA-----------------CERVVIEEFLD 179


>gi|41353015|gb|AAS01129.1| AclB [uncultured prokaryote]
          Length = 112

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  L GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEELANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  GRDRILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|323097757|emb|CBJ18440.1| ATP citrate lyase [uncultured bacterium]
          Length = 112

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG---APANFLDVGGGADQDKVAAAFKII------TSDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+       I        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLSGNVAELANYGEYSGGPTTDETKFYADTIFDLMSRFKDPE 60

Query: 321 VKGILINIFGGIMRCDVLV---KGILSAVKEVKINIPLV-----MRLEGANV 364
            +G ++ I G I     +    KGI+ +++E    +  V     +R  G N 
Sbjct: 61  GRGKILIIGGAIANFTDVAKTFKGIIQSLEEYADKLKSVGTKIYVRRGGPNY 112


>gi|238024091|ref|YP_002908323.1| CoA-binding protein [Burkholderia glumae BGR1]
 gi|237878756|gb|ACR31088.1| CoA-binding protein [Burkholderia glumae BGR1]
          Length = 719

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 78/227 (34%), Gaps = 26/227 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++AKA+L    +P A+G + + +  A +    +  P+  +K Q                
Sbjct: 503 EHRAKAMLAPLGIPFARGALAADIDDALAIAGRVGYPV-ALKVQ---------SGDISHK 552

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +       +      LGS +         + +  V VE   D   E+ +    
Sbjct: 553 SDVGGVMLGIDDAQALRAAWMQLGSNVKRH---APSAVIEGVLVEAMGDRGLEMIVGARN 609

Query: 125 DRTSGMVAFIA----STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           D   G V  +     + +   D+  +  D P+      I  L G      A L       
Sbjct: 610 DPQWGPVILVGFGGVAAEVMHDVRLLPHDLPRDGVIREISLLKG-----AALLRGFRGEP 664

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGR-LRVLDS 224
            +      D+   L  A    +  + EI  NP+++   GR    LD+
Sbjct: 665 ARDVGALADIVMRL-GALLQYEPGIREIDLNPVVLYPEGRGALALDA 710


>gi|218437868|ref|YP_002376197.1| cyanophycin synthetase [Cyanothece sp. PCC 7424]
 gi|218170596|gb|ACK69329.1| cyanophycin synthetase [Cyanothece sp. PCC 7424]
          Length = 879

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 3/107 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +PV KG VI  V     AI+ + G   VVK      GRG         +++ 
Sbjct: 224 KTILQDAGIPVPKGTVIQYVDELAEAIEDVGGFPIVVKPLDGNHGRGITIDVNSWEEAEE 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
              + S+     S I E        +     G  V    V +     
Sbjct: 284 AYDLASTASKTRSVIIERYYRGSDHRVLVINGKLVA---VAERIPAR 327


>gi|67921146|ref|ZP_00514665.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Crocosphaera watsonii WH 8501]
 gi|67857263|gb|EAM52503.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Crocosphaera watsonii WH 8501]
          Length = 1081

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  VPV    + S++  A++  + +     +++     GG G G           
Sbjct: 133 KEAMNKIGVPVCPSGIASTLKEAKAIGEEIGSYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEEMA-----------QFGIDASPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|172036953|ref|YP_001803454.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. ATCC
           51142]
 gi|171698407|gb|ACB51388.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. ATCC
           51142]
          Length = 1081

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  VPV    + S++  A++  + +     +++     GG G G           
Sbjct: 133 KDAMAKIGVPVCPSGIASTLKEAKAIGEEIGSYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEEMA-----------QFGIDASPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|41352961|gb|AAS01102.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTTAETQFYAETIFDLMTRYEDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI++A ++        N  + +R  G N 
Sbjct: 61  KVLIIGGAIANFTDVAKTFTGIINAFEKYADKLKAHNTKIYVRRGGPNY 109


>gi|34592269|gb|AAQ76331.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|295110871|emb|CBL27621.1| Acyl-CoA synthetase (NDP forming) [Synergistetes bacterium SGP1]
          Length = 703

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 36/232 (15%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY AK  L +Y++PV +  +  ++  A  A + L  P+ +         +G         
Sbjct: 491 EYDAKVFLSRYDIPVTRERLCLNLEEACDAAEELGFPVAL---------KGMAASVLHKT 541

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           ++        S + +   ++ +          G     V    V +      E  + +  
Sbjct: 542 EAGIVALDVRSFEELRGALKTVRKHLADYVGDGA----VQGFLVSEMVRGGFECIVGVKR 597

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML------- 177
           D   G    IA   GG+ +E +       +    +D       E+  ++   L       
Sbjct: 598 DPVFG--PMIAVGLGGIYVEVLGDVS---LRHGPVD------EEEALNMIRQLKGYSFLS 646

Query: 178 ---ELQGQARIDGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
                + +       +   + + A  + D+  L+INP+ +++ G+     D+
Sbjct: 647 GTRGSKPRDIRALAGIVSRVSRLAAIETDLLELDINPVFVLEEGKGAVAADA 698


>gi|148658610|ref|YP_001278815.1| CoA-binding domain-containing protein [Roseiflexus sp. RS-1]
 gi|148570720|gb|ABQ92865.1| CoA-binding domain protein [Roseiflexus sp. RS-1]
          Length = 698

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A+ ++  Y + + + ++  S   A      L  P+ +                 L  
Sbjct: 485 ELEARQVIEAYGMRLPRSLLAQSPEEAAEIAAHLGFPVVM----------KISSPDILHK 534

Query: 65  DSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              GGV++             E++              R+  V V++     RE+ + + 
Sbjct: 535 SDIGGVKLGIRDPDEARD-AYELIEYRARKYSREA---RIWGVLVQEQVRKGREVLVGVS 590

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQ 182
            D   G    IA    G+ +E +     +       +    V S     +   +      
Sbjct: 591 RDPQFG--PLIAFGLSGIYVEALKDVAFRLAPVSRQEAAEQVRSIRAFPILRGVRGEPPA 648

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                 ++   + +   D  ++  ++INPL++   G    VLD++I  
Sbjct: 649 DIATAEEIILRVAQLVTDFPEIVEMDINPLVVYNQGEGAIVLDARIIL 696


>gi|322376073|ref|ZP_08050583.1| phosphoribosylamine--glycine ligase [Streptococcus sp. C300]
 gi|321279023|gb|EFX56066.1| phosphoribosylamine--glycine ligase [Streptococcus sp. C300]
          Length = 420

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|304939611|emb|CBH30822.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTRERDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E      +++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDKLKEVDTKIYVRRGGPNY 111


>gi|304436685|ref|ZP_07396654.1| phosphoribosylamine-glycine ligase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304370381|gb|EFM24037.1| phosphoribosylamine-glycine ligase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 419

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+  V ++   A + I+    P+ VVK+   A G+             
Sbjct: 103 AKDLMKKYGIPTARYEVFTAAEPARAYIRQEGAPI-VVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  +  I    +     G  G+RV    +E+  +      L+   D T
Sbjct: 149 -GVIVAMTEQEALDAVDAI----MEDHSFGDAGARV---VIEEFMEGEEASLLAFT-DGT 199

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 200 TIRPMISA 207


>gi|226324796|ref|ZP_03800314.1| hypothetical protein COPCOM_02583 [Coprococcus comes ATCC 27758]
 gi|225207244|gb|EEG89598.1| hypothetical protein COPCOM_02583 [Coprococcus comes ATCC 27758]
          Length = 1066

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 60/201 (29%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L + N+P  KG  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILAQCNIPRPKGDTVFTAEEAKEVANRLGYPVLVRPSYVL-GGQGMQIAIND------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 +   I  I  I     I       G  +    V DG DI   L   ++      
Sbjct: 725 ----HDIDEFIGIINRIAQDHPILVDKYLVGKEIEVDAVCDGTDI---LIPGIMEHIERA 777

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            +        G  I         ++ K  I        E    L   L + G   I    
Sbjct: 778 GI------HSGDSISVYPAQSISEVTKRKI-------EEYTKRLAKALHVIGMINIQF-- 822

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                    C +D+ ++E+NP
Sbjct: 823 -------IVCGEDVYVIEVNP 836


>gi|126658369|ref|ZP_01729518.1| carbamoyl-phosphate synthase large subunit [Cyanothece sp. CCY0110]
 gi|126620301|gb|EAZ91021.1| carbamoyl-phosphate synthase large subunit [Cyanothece sp. CCY0110]
          Length = 1081

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  VPV    + S++  A+   K +     +++     GG G G           
Sbjct: 133 KDAMAKIGVPVCPSGIASTLEEAQVIGKEIGSYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEEMA-----------QFGIDASPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|34592281|gb|AAQ76337.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 109

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHXDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
             + I G I     + K   GI++A ++      +    + +R  G N 
Sbjct: 61  KXLIIGGAIANFTDVAKTFTGIINAFEKYADKLKEHKTKIYVRRGGPNY 109


>gi|304939629|emb|CBH30831.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK-----INIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E K     ++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYKDKLKEVDTKIYVRRGGPNY 111


>gi|311104895|ref|YP_003977748.1| ATP-grasp domain-containing protein 1 [Achromobacter xylosoxidans
           A8]
 gi|310759584|gb|ADP15033.1| ATP-grasp domain protein 1 [Achromobacter xylosoxidans A8]
          Length = 709

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 88/233 (37%), Gaps = 26/233 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK+LLR+  +P+ +G V++S   A S  + L  P+   VV +QI                
Sbjct: 486 AKSLLREAGLPIPEGRVVASAEQAASEAERLGFPVVMKVVSAQI------------AHKT 533

Query: 66  SKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELYLSLL 123
             GGV++  ++  +       I      +      G+ ++ + VE       RE+ + + 
Sbjct: 534 EAGGVKLGIANPDAAREAYAAIHE----SVARHHPGAIIDGILVERMLPPGGREVLVGV- 588

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQ 182
             R +     +    GG+ +E +     + +     D    +     A + D +      
Sbjct: 589 -HRDAAFGLVLTFGLGGIFVETIRDVAHRMVPLSRDDARALLREIRYAEVLDGVRGQPPA 647

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSL-LEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 DL   +   A+  +D    LE+NP+ +   G+    LD+ I    +A
Sbjct: 648 DLAALEDLILRVSDFAWSHRDALQELELNPVWVGAEGQGAMPLDALIGLRPDA 700


>gi|304939663|emb|CBH30848.1| ATP citrate lyase [uncultured bacterium]
          Length = 109

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G  +   D I    G    AN+ +  GG    +        F ++T D   +G
Sbjct: 1   WTMVAGGGACVVYADTIADLAGVNDLANYGEYSGGPTTAETQFYAETVFDLMTRDKDDRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            ++ I G I     + K   GI++A ++      +    + +R  G N 
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIINAFEKYADKLKEHKTKIYVRRGGPNY 109


>gi|41353009|gb|AAS01126.1| AclB [uncultured prokaryote]
          Length = 109

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 14/109 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAA----FKIITSDSSVKG 323
             MV G G ++   D I  + G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADFAGVEDLANYGEYSGGPTTGETKFYAETIFDLMTRYDDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
            ++ I G I     + K   GI+ A      K       + +R  G N 
Sbjct: 61  KVLIIGGAIANFTDVAKTFTGIIQAFEMYADKLKSHKTKIYVRRGGPNY 109


>gi|270291694|ref|ZP_06197910.1| phosphoribosylamine--glycine ligase [Streptococcus sp. M143]
 gi|270279779|gb|EFA25620.1| phosphoribosylamine--glycine ligase [Streptococcus sp. M143]
          Length = 420

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIERQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  ++   +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVDQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|116694873|ref|YP_729084.1| 6-carboxyhexanoate-CoA ligase [Ralstonia eutropha H16]
 gi|113529372|emb|CAJ95719.1| 6-Carboxyhexanoate-CoA ligase [Ralstonia eutropha H16]
          Length = 716

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 67/231 (29%), Gaps = 19/231 (8%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E++A   L    +P A   +      A    + +  P+ V                 
Sbjct: 495 SLSEFEAMQWLNACGIPTAPHGLARDADEAVRIAEGIGYPVAV----------KLCSPDI 544

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV +  +    +      + +      +           V        EL + 
Sbjct: 545 LHKSDVGGVVLNVADAQAVRAAFAQVQAAATNHGSPARF---EGALVAGMVRGWGELMVG 601

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCDMLELQ 180
           +  D   G+VA      GG  +E   +                + +    A LC      
Sbjct: 602 VRRDPVFGLVALAG--IGGTAVEIFRQTAFGLAPLTHARACTMLRASRAEALLCGHRGHP 659

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFD 229
                   ++   + +A       L  LEINPLI+   G +   D+ ++  
Sbjct: 660 AVDADAVAEVLARVSQAAAALGPRLDTLEINPLIVTAQG-VVAADAVVTLH 709


>gi|220907091|ref|YP_002482402.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC
           7425]
 gi|219863702|gb|ACL44041.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC
           7425]
          Length = 1107

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ +  V V    +  ++  A++  + +     +++     GG G G           
Sbjct: 133 KEVMEEIGVGVCPSGLAENMAEAKAIAQRIGVYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q+G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEEIA-----------QSGLEASPVSQILIEQSLIGWKEYELEVMRD-MA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T ++   L D 
Sbjct: 227 DNVVIICS------IENLDPMGIHTGDSITVAPAQTLTDKEYQRLRDA 268


>gi|209519442|ref|ZP_03268238.1| CoA-binding domain protein [Burkholderia sp. H160]
 gi|209500109|gb|EEA00169.1| CoA-binding domain protein [Burkholderia sp. H160]
          Length = 707

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 16/222 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY+AK +L    VP ++G + + V AA +  + +  P+  +K Q           +    
Sbjct: 493 EYRAKQVLAPLGVPFSRGELATDVDAALTIAERIGYPV-ALKVQA---------SEISHK 542

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +       +      LGS +           ++ V VE       E+ +    
Sbjct: 543 SDVGGVMLGIDGPQALRAAWMQLGSNVKRHAPAVA---LDGVLVEAMGKRGLEMIVGARN 599

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D   G+V  +       ++    +  P  + +  +   IG   +    L           
Sbjct: 600 DPQWGLVILVGFGGVAAEVMRDVRLLPHDLTREAVVREIG-RLKGAPLLHGYRGEPALDV 658

Query: 185 IDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGR-LRVLDS 224
               D+   L      ++ +  +++NP+++   G+ +  LD+
Sbjct: 659 EALADVVVRLGALLQSEQRIREIDLNPVVVYPAGQGVLALDA 700


>gi|120402714|ref|YP_952543.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119955532|gb|ABM12537.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Mycobacterium
           vanbaalenii PYR-1]
          Length = 401

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 46/193 (23%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  L    VPV +   + SV  A +    L GP+ V+K+ +  G  G+            
Sbjct: 115 RERLSSLGVPVPRYTAVGSVDDAVAFCTELGGPV-VIKT-VRGGYDGR------------ 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV + SS+  V S + + L            G  V    +E+   + RE  L+ LV R  
Sbjct: 161 GVIMASSVAEVRSVVSQYLD----------DGVPV---LIEERVAMRRE--LAALVAR-- 203

Query: 129 GMVAFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQ 180
                  S  G G     V       I   ++ P  G++        E   S+   L + 
Sbjct: 204 -------SPFGQGAAWPVVETVQRDGICVTVLAPAPGLSDELGSAASELALSVASSLGVV 256

Query: 181 GQARIDGGDLFPN 193
           G   ++  +    
Sbjct: 257 GVLAVELFETVSG 269


>gi|226357454|ref|YP_002787193.1| cyanophycin synthetase [Deinococcus deserti VCD115]
 gi|226319444|gb|ACO47439.1| putative cyanophycin synthetase [Deinococcus deserti VCD115]
          Length = 886

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 35/100 (35%), Gaps = 14/100 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  +PV +G V+ +V  A    + L  P+ V K      GRG       P   + 
Sbjct: 217 KRLLDRAGLPVPQGAVVRTVDEAVRVARRLGTPV-VTKPLDGNHGRGVSLNLSTPEQVRH 275

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           G       +      RE++     T          + V V
Sbjct: 276 G------FEEARQHSREVVVEQFFTGND-------HRVLV 302


>gi|254445945|ref|ZP_05059421.1| carbamoyl-phosphate synthase, large subunit [Verrucomicrobiae
           bacterium DG1235]
 gi|198260253|gb|EDY84561.1| carbamoyl-phosphate synthase, large subunit [Verrucomicrobiae
           bacterium DG1235]
          Length = 1079

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 51/193 (26%)

Query: 3   IHEY---------------QAKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLY 43
           +HEY               + + L ++      + VA    ++S+  A SA K + G   
Sbjct: 108 LHEYGVEMIGAKPDAIKKGEDRELFKEAMLKIGLDVAHSRTVNSLEEARSAAKEIGGFPL 167

Query: 44  VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           +++     GG G G              +  + +     +             G   S V
Sbjct: 168 IIRPSFTMGGSGGG--------------IAYNREEFEDIVSN-----------GLELSPV 202

Query: 104 NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
           + V VE+     +E  + ++ DR    V           IE            + + P +
Sbjct: 203 HEVLVEECLLGWKEYEMEVMRDRKDQCVVI-------CSIENFDPMGVHTGDSITVAPAM 255

Query: 164 GVTSEDVASLCDM 176
            ++  +  ++ D 
Sbjct: 256 TLSDREYQAMRDA 268


>gi|41353007|gb|AAS01125.1| AclB [uncultured prokaryote]
          Length = 112

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  L GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEELANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|323448893|gb|EGB04786.1| hypothetical protein AURANDRAFT_66963 [Aureococcus anophagefferens]
          Length = 313

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 70/242 (28%), Gaps = 44/242 (18%)

Query: 3   IHEYQAKALLRKY--------------NVPVAKGVVISSVHAAESAIKTLPGPLY----- 43
           + EY  K LL KY               + V  G   S   +  S    L    +     
Sbjct: 6   VREYFGKQLLAKYLGEASGGEFEFEGRGMLVKSG--ASDPASPSSWAALLAAHPWARDAR 63

Query: 44  -VVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR 102
            V K       RGK             + ++ S     + +   + +T+     G  G  
Sbjct: 64  LVAKPDQLIKRRGKAGL----------LAIDKSFDECRAWVDARMNATI--DVEGVEG-V 110

Query: 103 VNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
           ++   VE      +  E Y+ ++ +R    + F            V         K L  
Sbjct: 111 LHTFLVEPFVPHAQADEYYVCVVSNREGEELLF-------CKDGGVDVGDVDAKAKRLQV 163

Query: 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
           PL    + D  +   +  +    +         L   +       +EINP+  +++    
Sbjct: 164 PLGESAAPDALAAALLDGVPEARKPKLARFLATLLGVYRQLHFVYMEINPIGRVRSMETN 223

Query: 221 VL 222
            +
Sbjct: 224 AV 225


>gi|119510362|ref|ZP_01629497.1| GCN5-related N-acetyltransferase [Nodularia spumigena CCY9414]
 gi|119464999|gb|EAW45901.1| GCN5-related N-acetyltransferase [Nodularia spumigena CCY9414]
          Length = 743

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV-VKSQIHAGGRGKGRFKE 61
           + E+++K +L  Y VPV    V  S   A    + +  P+ + V S      +      +
Sbjct: 519 LTEFESKQILAAYGVPVVTTCVAESEDEAVRCAENMGYPVVLKVFSHTIT-HKTDVGGVQ 577

Query: 62  LPADSKGGVRVESSLKSVISDIR 84
           L       VR+  +  +     +
Sbjct: 578 LNLRDAEAVRLAYNAIAESVSAK 600


>gi|163758484|ref|ZP_02165572.1| putative acyl-CoA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284773|gb|EDQ35056.1| putative acyl-CoA synthetase [Hoeflea phototrophica DFL-43]
          Length = 696

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 77/226 (34%), Gaps = 28/226 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV-VKSQIHAGGRGKGRFKELP 63
           E  +KA L+ + +     +V+  +  A +A  +L  P+ V V S   A     G      
Sbjct: 491 EAVSKAALKAFGLTTPHHIVV-PIEDAANAASSLGFPVTVKVHSDTIAHKARIGGVHLNL 549

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSL 122
            DS        S+   +S                  G  V  V VE        EL L +
Sbjct: 550 GDSAMVTAAVVSMTETVSRAEG--------------GHAVTHVLVESMIAGAEAELILGI 595

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
               + G+   I   +GG+  E++A         +    L+ +   ++      L  +  
Sbjct: 596 KRHPSMGLALMIG--KGGVHAEDLA---------VFETVLLPIDGPELDRALHRLGYRNH 644

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
             +         Y      ++  L++NPL+I  +G+    D+ I  
Sbjct: 645 EAVLAAAHAVANYALSNAAELVTLDVNPLLITTDGQAIAADALIVL 690


>gi|300121799|emb|CBK22373.2| Acetyl CoA synthetase subunit ? [Blastocystis hominis]
          Length = 768

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 77/240 (32%), Gaps = 19/240 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           + E +   +L    +      V++S  +A      L   G   VV   +           
Sbjct: 531 LTEVEGYEVLCHCGIQTPAHAVVTSGTSAGDFAAKLFSRGVRSVVAKVV--------SPD 582

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L     GGV +    +  +S     L +          G   + + V +      E+ +
Sbjct: 583 ILHKTDVGGVSLNLESEEAVSREVARLHAKFS-----AQGIEYHGIMVSEMVPKGLEMMI 637

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLEL 179
               +R +       +  GG+ +E +           + +    +       + +  L L
Sbjct: 638 G--ANRDAAFGPLTVAGAGGVFVELLKDVAFNMCPVSIEEAKRSLCHLKYREMMEGKLGL 695

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
               +         +     +  ++  L+INPLI MK+G L  +DS I  + +  ++   
Sbjct: 696 PPLNQGLFARSVSAVSCLMKECPEIKELDINPLIQMKDGNLTAVDSVIKLEWSVCWKQRK 755


>gi|18313936|ref|NP_560603.1| hypothetical protein PAE3249 [Pyrobaculum aerophilum str. IM2]
 gi|18161507|gb|AAL64785.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 232

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 23/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
            + E +A ALLR Y +PV +  V      A  A + +  P+   ++  QI          
Sbjct: 16  KLKEDEALALLRAYGIPVPEFAVARDEEEAVKAAEEIGFPVVAKIISRQI---------- 65

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             +     GGV +  +    I D  + L   +           +  V ++       EL 
Sbjct: 66  --VHKTDVGGVILGINDAQGIRDACKRLREVVKRVPYAE----LEGVLIQKMIPRGVELI 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +  + D   G         GG+  E       + I     D    V       L      
Sbjct: 120 VGSVYDEIFGHAVLFG--LGGIFTELYKDISMRIIPIEPEDAWEMVQEVKAYRLLTGFRG 177

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
           +  +      D+     +   +  +++  ++NP+I ++ G+   V+D++   
Sbjct: 178 MPPRDIPAVVDIVLKFARLIQENPEIAEADLNPVIALEEGKGAYVVDARFIL 229


>gi|225850922|ref|YP_002731156.1| phosphoribosylamine--glycine ligase [Persephonella marina EX-H1]
 gi|225645317|gb|ACO03503.1| phosphoribosylamine--glycine ligase [Persephonella marina EX-H1]
          Length = 429

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 47/116 (40%), Gaps = 23/116 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A      + + A   +K +  P+ V+K+   A G+             
Sbjct: 106 AKNFMKKYGIPTAFYETFDNENEAVEFVKKMGTPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV + +S +  ++ I+++ G           G     + +E+        Y++++
Sbjct: 152 -GVVIANSEEEAVNTIKDMFGGRF--------GEASKRIVIEEFLTGEEASYIAMV 198


>gi|218782210|ref|YP_002433528.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763594|gb|ACL06060.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 694

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 28/230 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ +K +L    +PV + ++ +    A +A + L  P+      +     G       
Sbjct: 489 LDEHASKQILAATGIPVVQEILAAGQDQAVTAAEKLGYPVV-----MKGLAPGMIH---- 539

Query: 63  PADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
               +G VR+   + +       ++             G     V V+  A I  E+   
Sbjct: 540 -KTEQGLVRLNIRAKQEAARTFEDL------MSAMDGQG----KVLVQQQAVIDMEIIAG 588

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE--DVASLCDMLEL 179
           L+ D   G    +    GG+   EV  D    +  L +D  + +     +   L      
Sbjct: 589 LVKDPQFG-PCVM-CGLGGV-YAEVLNDAVFAMAPLDMDAALALIGRLKNQRMLDGFRGA 645

Query: 180 QGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISF 228
               R+   ++   L     + D +  L+INPL+I   G+   +D+ I  
Sbjct: 646 APVDRMALAEILVRLGALGMELDNVRELDINPLVI-SEGKPLAVDASIIL 694


>gi|94309649|ref|YP_582859.1| cyanophycin synthetase [Cupriavidus metallidurans CH34]
 gi|93353501|gb|ABF07590.1| cyanophycin synthetase [Cupriavidus metallidurans CH34]
          Length = 883

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 224 KSLLESCGVPVPEGRMVESAEDAWDAAEDIGVPV-VVKP--YDGNHGRGVFTNLMTREEV 280

Query: 69  GVRVESSLKS 78
                 +++ 
Sbjct: 281 ETAYAVAIEE 290


>gi|293364598|ref|ZP_06611319.1| phosphoribosylamine-glycine ligase [Streptococcus oralis ATCC
           35037]
 gi|307702850|ref|ZP_07639798.1| phosphoribosylamine--glycine ligase [Streptococcus oralis ATCC
           35037]
 gi|291316856|gb|EFE57288.1| phosphoribosylamine-glycine ligase [Streptococcus oralis ATCC
           35037]
 gi|307623530|gb|EFO02519.1| phosphoribosylamine--glycine ligase [Streptococcus oralis ATCC
           35037]
          Length = 421

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVATA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRSYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  ++ K+  +++      +G +V   G  +A    +KL
Sbjct: 304 DFAQNITDILDGKEPAITWTDEGVTLGVVVASNGYPLAYEKGVKL 348


>gi|290959566|ref|YP_003490748.1| hypothetical protein SCAB_51681 [Streptomyces scabiei 87.22]
 gi|260649092|emb|CBG72206.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 750

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 87/227 (38%), Gaps = 23/227 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 537 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAASLVGYPVV-----MKASGARIAHKTEL 591

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   +    RE+      T         ++ V V    +   E+ + +
Sbjct: 592 GLVKVG----LTSASQIRDAYREL------TDIARYEDVSLDGVLVCQMVERGVEMVVGV 641

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDML-ELQ 180
             D   G    +    GG+ +E V +D   ++     D    + +E    +L D +    
Sbjct: 642 THDDLFGPTVTVG--LGGVLVE-VLRDSAVRVPPFAEDQAHAMLAELRGRALLDGVRGAP 698

Query: 181 GQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                   ++   + +   +   +++ L+INPL+++  G+    LD+
Sbjct: 699 PADVDALVEVVLRVQRMALELGDEIAELDINPLMVLPRGQGAVALDA 745


>gi|171060710|ref|YP_001793059.1| cyanophycin synthetase [Leptothrix cholodnii SP-6]
 gi|170778155|gb|ACB36294.1| cyanophycin synthetase [Leptothrix cholodnii SP-6]
          Length = 865

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +K LL    VPV  G  ++SV  A +  + +  P+ V+K Q   G +GKG    + 
Sbjct: 211 SKRLLAAAGVPVPIGRPVTSVDDAWAVAQEIGLPV-VLKPQ--DGNQGKGVTVNIV 263


>gi|238926163|ref|ZP_04657923.1| phosphoribosylamine--glycine ligase [Selenomonas flueggei ATCC
           43531]
 gi|238885843|gb|EEQ49481.1| phosphoribosylamine--glycine ligase [Selenomonas flueggei ATCC
           43531]
          Length = 419

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+  V ++   A + I+    P+ VVK+   A G+             
Sbjct: 103 AKDLMKKYGIPTARYEVFTAAEPARAYIRQEGAPI-VVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  ++ +  I    +     G  G+RV    +E+  +      L+   D  
Sbjct: 149 -GVIVAMTEQEALNAVDAI----MEDHSFGDAGARV---VIEEFMEGEEASLLAFT-DGM 199

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 200 TIRPMISA 207


>gi|41353011|gb|AAS01127.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D +   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTVADLGRVKELANYGEYSGNPSRTETREYVKTVFDLMTREKHESG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           K  ++ I G I     + K   GI+ A+KE       + + + +R  G N 
Sbjct: 61  KPKILIIGGAIANFTDVAKTFDGIIDAMKEYADKLKDVGVRIYVRRGGPNY 111


>gi|47210997|emb|CAF95829.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 962

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 72/245 (29%), Gaps = 42/245 (17%)

Query: 41  PLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
              VVK       RGK     +  D +G              +RE L S L+ + T    
Sbjct: 2   KRLVVKPDQLIKRRGKLGLVGIDLDLQG--------------VREWLRSHLMQETTVGKA 47

Query: 101 SRVNC-VYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
             V     +E      +  E Y+ +   R    V F    +GG D+ +V     +    +
Sbjct: 48  KGVLKNFLIEPFVLHTQEDEFYVCIYATREGDHVLF--HHEGGADVGDVDAKAQRL--MV 103

Query: 158 LIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            +D    +T E V+    +L      + +  D+   L   F   +               
Sbjct: 104 AVD--DKLTEEQVSE--QLLTHVFDDKKECKDIHGTLVTTFKVSEKWNAPACKRKETP-- 157

Query: 218 RLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAG 277
                D +             I   ++    D          L+ +   G I  MV G G
Sbjct: 158 ----RDFRF-----------KITRPQEAYIADLDAKSGASLKLTLLNPRGRIWTMVAGGG 202

Query: 278 LAMAT 282
            ++  
Sbjct: 203 ASVVY 207


>gi|258591244|emb|CBE67541.1| Acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [NC10 bacterium 'Dutch sediment']
          Length = 888

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 83/246 (33%), Gaps = 43/246 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K  L  Y +P  K  +  ++  A S   ++  P+ V+K                
Sbjct: 487 LTEKESKRFLVNYGIPTVKPYLTKNLEEALSVANSVGYPV-VLK------------IVSP 533

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLS 121
               K  V    +      +++   G  +   Q     + ++ + V+   + +  EL L 
Sbjct: 534 DILHKSDVGGVVTGIDSDRELKSEYGHLIKRVQKKAPQATISGISVQQMVEKVDYELILG 593

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED---VASLCDML- 177
           +  D+  G V       GG+ +E               D  IG+   +      L +   
Sbjct: 594 MKKDKDFGSVILFG--MGGIGVEMFQ------------DFSIGLPPLNQTLARRLMEETK 639

Query: 178 ---------ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
                                +  +      D  +++ ++INPL I   G+   LD++I 
Sbjct: 640 VFRMIQGYRGRPAADMTQLEQILVSFSNLVIDFPEIAEIDINPLAI-SEGKACALDARIV 698

Query: 228 FDDNAL 233
            D +A+
Sbjct: 699 LDQHAV 704


>gi|157382786|gb|ABV48830.1| ATP citrate lyase beta subunit [enrichment culture clone BSEaclB2]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKII------TSDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +      +     
Sbjct: 1   WTMVAGGGASVVYADTIADLGYVNELANYGEYSGNPSRTETREYVKTVFDLMTRSKHPEG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGA 362
           K  ++ I G I     + K   GI+ A++E      ++ + + +R  G 
Sbjct: 61  KSKILIIGGAIANFTDVAKTSAGIIDAMQEYADKLKEVGVRIYVRRGGP 109


>gi|37992755|gb|AAR06584.1| glycinamide ribonucleotide synthetase [Nicotiana tabacum]
          Length = 515

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+L  KY +P AK    +   AA   IK    P+ VVK+   A G+              
Sbjct: 191 KSLCDKYGIPTAKYQAFTDPSAANEYIKQEGAPI-VVKADGLAAGK-------------- 235

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L+     +  +L    +    G  G   + V VE+  +     + +L+
Sbjct: 236 GVIVAMTLEQAYEAVDSML----VENAFGSAG---SRVIVEEYLEGEEASFFALV 283


>gi|34592245|gb|AAQ76319.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQD 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + +   +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKTYVRRGGPNY 111


>gi|22299713|ref|NP_682960.1| cyanophycin synthetase [Thermosynechococcus elongatus BP-1]
 gi|10047072|emb|CAC07987.1| cyanphycin synthetase [Synechococcus elongatus]
 gi|22295897|dbj|BAC09722.1| cyanophycin synthetase [Thermosynechococcus elongatus BP-1]
          Length = 896

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK LL+   +PV KG VI  +     AI+ + G   V+K      GRG
Sbjct: 223 AKRLLQDAGIPVPKGTVIRYIEDLPEAIEEIGGYPIVIKPLNGNHGRG 270


>gi|11498757|ref|NP_069986.1| phosphoribosylamine--glycine ligase (purD) [Archaeoglobus fulgidus
           DSM 4304]
 gi|7994661|sp|O29108|PUR2_ARCFU RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|2649432|gb|AAB90089.1| phosphoribosylamine--glycine ligase (purD) [Archaeoglobus fulgidus
           DSM 4304]
          Length = 470

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L++  VP+ +     +   A+  I+       VVK+   A G+             
Sbjct: 114 AKDFLKRIGVPIPEYANFDNPEEAKEYIREKFNNGIVVKADGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  S++  +  + EI    ++ K+ G  G   N + VE+  
Sbjct: 161 -GVYVCDSVEEALRAVDEI----MVQKKFGEAG---NRIVVEERL 197


>gi|94270187|ref|ZP_01291672.1| putative UDP-N-acetylmuramyl tripeptide synthase [delta
           proteobacterium MLMS-1]
 gi|93450905|gb|EAT01912.1| putative UDP-N-acetylmuramyl tripeptide synthase [delta
           proteobacterium MLMS-1]
          Length = 891

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           H+Y A  LL  + +PV    + +++  A    + L  P+ V
Sbjct: 225 HKYVANRLLADHGLPVPPAGLAANLEQAVKLAEQLGWPVVV 265


>gi|304939607|emb|CBH30820.1| ATP citrate lyase [uncultured bacterium]
 gi|304939617|emb|CBH30825.1| ATP citrate lyase [uncultured bacterium]
 gi|304939623|emb|CBH30828.1| ATP citrate lyase [uncultured bacterium]
 gi|304939627|emb|CBH30830.1| ATP citrate lyase [uncultured bacterium]
 gi|304939631|emb|CBH30832.1| ATP citrate lyase [uncultured bacterium]
 gi|304939633|emb|CBH30833.1| ATP citrate lyase [uncultured bacterium]
 gi|304939637|emb|CBH30835.1| ATP citrate lyase [uncultured bacterium]
 gi|304939639|emb|CBH30836.1| ATP citrate lyase [uncultured bacterium]
 gi|304939641|emb|CBH30837.1| ATP citrate lyase [uncultured bacterium]
 gi|304939647|emb|CBH30840.1| ATP citrate lyase [uncultured bacterium]
 gi|304939651|emb|CBH30842.1| ATP citrate lyase [uncultured bacterium]
 gi|304939653|emb|CBH30843.1| ATP citrate lyase [uncultured bacterium]
 gi|304939655|emb|CBH30844.1| ATP citrate lyase [uncultured bacterium]
 gi|304939665|emb|CBH30849.1| ATP citrate lyase [uncultured bacterium]
 gi|306481129|emb|CBN08510.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E      +++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDKLKEVDTKIYVRRGGPNY 111


>gi|157382788|gb|ABV48831.1| ATP citrate lyase beta subunit [enrichment culture clone BSEaclB5]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKII------TSDSSV 321
             MV G G ++   D I   G     AN+ +  G   + +     K +      +     
Sbjct: 1   WTMVAGGGASVVYADTIADLGYVNELANYGEYSGNPSRTETREYVKTVFDLMTRSKHPEG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGA 362
           K  ++ I G I     + K   GI+ A++E      ++ + + +R  G 
Sbjct: 61  KSKILIIGGAIANFTDVAKTFAGIIDAMQEYADKLKEVGVRIYVRRGGP 109


>gi|218441180|ref|YP_002379509.1| CoA-binding protein [Cyanothece sp. PCC 7424]
 gi|218173908|gb|ACK72641.1| CoA-binding domain protein [Cyanothece sp. PCC 7424]
          Length = 921

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 93/281 (33%), Gaps = 44/281 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  Y +P+ +    +S   A +  +++  P+ V                  
Sbjct: 508 LTEAESKQILAAYGIPIVRTATATSEEEAIAIAESMGYPVVV----------KLYSKTIT 557

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT---GSRVNCVYVEDGADILRELY 119
                GGV++  + K  +    + +    + ++ GP    G  V  +      +   EL 
Sbjct: 558 HKTDVGGVQLNLTDKEAVRWAYQDI-KISVEERVGPEHFQGVTVQPML---NLNGGYELI 613

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-- 177
           L   +D   G    +  T GG  +E         I    ++  +     +   +   L  
Sbjct: 614 LGSSIDPQFG-PVLLFGT-GGQLVEVFRDH---AIALPPLNTTLARRMMEQTKIYKALQG 668

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
               +         L     +   ++  +  ++INPL+   + RL  LD++I      LY
Sbjct: 669 VRGRKPVNLEALEYLLVRFSQLVVEQPWIKEIDINPLLA-SSQRLTALDARIV-----LY 722

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNG 275
                    D   E       + + + Y+        M NG
Sbjct: 723 PQ-------DTPIEQLPRPAIRPYPMQYVTP----WTMPNG 752



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 31/183 (16%)

Query: 231 NALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           +A +R   + E+  +SE  D  E+  KQ +L        +  + N  G  +   D +   
Sbjct: 284 DAAFRRCGVLEVNRISEMFDMAELLGKQSHLPKSP---RLSIVTNAGGPGVLATDALINT 340

Query: 290 GGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG  A                     N +D+ G A  ++   AF I+  D +  GIL+ I
Sbjct: 341 GGELAQLCPETLAKLDEVLPPHWSHGNPIDILGDATPERYTKAFDIVQEDPNTDGILV-I 399

Query: 329 FGGIMRCD--VLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
                  D     + +   +K+ K  + L   + G+ +  G  ++ +S +      D   
Sbjct: 400 LTPQAMTDPTQTAQQLKPYIKKAKKPV-LASWMGGSEIIDGETILNDSQIPTYRYPD--S 456

Query: 387 AAQ 389
           AA+
Sbjct: 457 AAR 459


>gi|120611483|ref|YP_971161.1| GCN5-like N-acetyltransferase [Acidovorax citrulli AAC00-1]
 gi|120589947|gb|ABM33387.1| GCN5-related N-acetyltransferase [Acidovorax citrulli AAC00-1]
          Length = 897

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 82/238 (34%), Gaps = 28/238 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  + VPV K ++  S H A      L  P+  +K                
Sbjct: 482 LTEMESKTLLAAFQVPVTKTLLARSAHEAMMIATQLGFPV-ALKID--------SPDIAH 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D  G      S  +      +++            G+R+N V V+  A     RE+ +
Sbjct: 533 KSDVGGVALDIHSGTAARDAYTDMVQRV----ARLQPGARINGVTVQKMARARRGREICI 588

Query: 121 SLLVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G         G M     D         Q + + LI+      S    +L +
Sbjct: 589 GLVTDDPFG-PVITFGAGGTMIELIDDRAMELPPLNQFLARRLIE-----RSRVAETLGE 642

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                   R         + +  C    +  ++INPLI+   G +  +D++I   D A
Sbjct: 643 WRGASAVDRDALEQTLLRVSEMVCALPQLREMDINPLIVDAGG-VVAVDARIVVRDTA 699


>gi|34592227|gb|AAQ76310.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQD 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R+ G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRIGGPNY 111


>gi|85539421|emb|CAJ57326.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539423|emb|CAJ57327.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539427|emb|CAJ57329.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539443|emb|CAJ57337.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539445|emb|CAJ57338.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539449|emb|CAJ57340.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539451|emb|CAJ57341.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539453|emb|CAJ57342.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539459|emb|CAJ57345.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539461|emb|CAJ57346.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539463|emb|CAJ57347.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539465|emb|CAJ57348.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++  + +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYAVKMKDVGTRIYVRRGGPNY 112


>gi|330507720|ref|YP_004384148.1| CoA-binding domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928528|gb|AEB68330.1| CoA-binding domain protein [Methanosaeta concilii GP-6]
          Length = 693

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 29/231 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E+++KA+L +  +     VV  +   A    K+L  P+   V+   +           
Sbjct: 22  LMEHESKAILEELGISTTGSVVARTEEEAVEIFKSLASPVALKVLSPDV----------- 70

Query: 61  ELPADSKGGVRVESSLK-SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +     GGV++  + +  V    R+I         +   G  V  + V+  A    E  
Sbjct: 71  -VHKSDAGGVKLHLNEENDVRRAYRDI--------VSSFQGKPVEGISVQKMAPTGIEAI 121

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           + +  D  +     +    GG+ +E +     + I     D    +      SL      
Sbjct: 122 VGVAND-PTFGPVLMFGL-GGVFVEVLKDVSFRSIPITRSDAQEMIEEIRGYSLLKGSRG 179

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISF 228
                    DL   +   F + +  + E+  NP+ +  +G   V+D++I  
Sbjct: 180 HSADIEALKDLLMRISD-FVNLEPRIWEMDLNPVFLYPHG-CTVVDARIIL 228


>gi|116753867|ref|YP_842985.1| CoA-binding domain-containing protein [Methanosaeta thermophila PT]
 gi|116665318|gb|ABK14345.1| CoA-binding domain protein [Methanosaeta thermophila PT]
          Length = 689

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 103/374 (27%), Gaps = 41/374 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K +L    +      + SS   A      L  P+ +         +       L
Sbjct: 20  LMEHESKRILMDVGLETTGAHLASSADDAVRIANQLGYPVVLKVLSKEVIHKSDAGGVRL 79

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                  VR        I   R ++G                 V V+  A    E+ + +
Sbjct: 80  NLQGAEAVRSAYHEMEKIFRERGMIG-----------------VSVQRMASPGIEVIIGV 122

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D  +     +    GG+ +E +     + I     D    +       L         
Sbjct: 123 TRD-PTFGPVLMFGL-GGVFVEILRDVSFRSIPISEEDAESMIREIRGYPLLRGYRGISG 180

Query: 183 ARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
                  +   +         +  +++NP+ +   G     D++I  D ++         
Sbjct: 181 DIDAIKSILLRVSDLVEKHSIIKEMDLNPVFVYPMGYTIA-DARIILDSSS----PSPAA 235

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGG 301
           +   S  D          L Y      IG       L       +  +G     +     
Sbjct: 236 MHPQSAGD-------LKGLFYPQSIAVIGASNTKGKLGWNVFYNLLTHGYRGRLYPVNPN 288

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
            A+   V A   I      V   ++ +  G M   V+     + VK       +V+   G
Sbjct: 289 AAEVQGVKAYPSIRDVPEPVDVAVVLVPAG-MTPQVVQDCCAAGVKY------IVVESAG 341

Query: 362 ANV--DIGNRLIAE 373
                D G R+  E
Sbjct: 342 FAELGDEGKRIERE 355


>gi|262283686|ref|ZP_06061451.1| phosphoribosylamine-glycine ligase [Streptococcus sp. 2_1_36FAA]
 gi|262260743|gb|EEY79444.1| phosphoribosylamine-glycine ligase [Streptococcus sp. 2_1_36FAA]
          Length = 419

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|126665000|ref|ZP_01735983.1| predicted Acetyl-CoA synthetase [Marinobacter sp. ELB17]
 gi|126630370|gb|EBA00985.1| predicted Acetyl-CoA synthetase [Marinobacter sp. ELB17]
          Length = 714

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 17/229 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E++AK+LLR Y V V K +++ +      A+         +K               
Sbjct: 495 DLFEFEAKSLLRTYGVDVPKELIVRNEAEFLEAVAEFGHTSLAMKVV---------SKDI 545

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV++  S +   +D+R      L   +     + +  V +   A    E+ + 
Sbjct: 546 LHKSDAGGVKLNLSGE---ADLRRGHAEILAACKLYKADAEIEGVLLAPMARKGTEVIIG 602

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
           +  D   G    +    GG+ +E +     + I     D    V       + D      
Sbjct: 603 VSRDPVFG-PVLMFGL-GGIFVEVLEDVAFRAIPLSRNDAHAMVNQIKARKILDGTRGEP 660

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISF 228
             ++    +L   +          L L++NP+I   +G   V+D+++  
Sbjct: 661 AVSKDALVELLLKVSSIVDAHSEILELDLNPVIAYDDG-YAVVDARVIV 708


>gi|41352997|gb|AAS01120.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 17/111 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  L GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVAELANYGEYSGGPTTDETRFYTETVLDLMTREKDPQ 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
            +  ++ I G I     + K   GI+ A ++       + + + +R  G N
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPN 111


>gi|85539415|emb|CAJ57323.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539417|emb|CAJ57324.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++  + +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKFAVKMKDVGTRIYVRRGGPNY 112


>gi|52696133|pdb|1VKZ|A Chain A, Crystal Structure Of Phosphoribosylamine--Glycine Ligase
           (Tm1250) From Thermotoga Maritima At 2.30 A Resolution
 gi|52696134|pdb|1VKZ|B Chain B, Crystal Structure Of Phosphoribosylamine--Glycine Ligase
           (Tm1250) From Thermotoga Maritima At 2.30 A Resolution
          Length = 412

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 15/91 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK   +KY +  A+  V  +       IK    P YV+K+   A  RGK           
Sbjct: 110 AKRFXKKYGIRTARFEVAETPEELREKIKKF-SPPYVIKADGLA--RGK----------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGP 98
            GV +  S +  I    +++   LI    GP
Sbjct: 156 -GVLILDSKEETIEKGSKLIIGELIKGVKGP 185


>gi|269797436|ref|YP_003311336.1| phosphoribosylamine/glycine ligase [Veillonella parvula DSM 2008]
 gi|269094065|gb|ACZ24056.1| phosphoribosylamine/glycine ligase [Veillonella parvula DSM 2008]
          Length = 420

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A   V   +  A++ I     P+ VVK+   A G+             
Sbjct: 106 AKDLMKKYNIPTAAYGVFHKIDEAKAFIAQTEAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + + ++L       + G  G   + V +E+  +      L+ + D  
Sbjct: 152 -GVVVAMTVDEANAAVEDML----SGNRFGDAG---STVVIEEFMEGEEASLLAFV-DGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMI 208


>gi|324992709|gb|EGC24630.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK405]
          Length = 420

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKSYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +  ++E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAVQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|297156179|gb|ADI05891.1| Carbamoyl-phosphate synthase L chain ATP- binding protein
           [Streptomyces bingchenggensis BCW-1]
          Length = 492

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 24/114 (21%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            +PV  G    +++   A+     +  P  ++K+    GGRG    +E  A       + 
Sbjct: 127 GLPVLPGSTGAVATPAEAKDIAGRIGYP-LILKAVAGGGGRGMAVVREPDA-------LV 178

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            +     +  R + G                 +Y+E   +  R + + +L DR 
Sbjct: 179 PAFNETRAHARAVFGD--------------ERLYMERFVEHARHVEVQVLADRH 218


>gi|255283885|ref|ZP_05348440.1| carbamoyl-phosphate synthase, large subunit [Bryantella
           formatexigens DSM 14469]
 gi|255265606|gb|EET58811.1| carbamoyl-phosphate synthase, large subunit [Bryantella
           formatexigens DSM 14469]
          Length = 1065

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +L K  +P   G  + +   A+ A   L  P+ V  S +  G                G+
Sbjct: 674 ILEKCGIPRPAGHTVFTAEEAKKAANELGYPVLVRPSYVLGG---------------QGM 718

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           ++  S + V   I     I     I       G  +    V DG DI
Sbjct: 719 QIAISDEDVDEFIGIINRIAQEHPILVDKYLVGKEIEVDAVCDGTDI 765


>gi|332363640|gb|EGJ41420.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK49]
          Length = 419

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|327463386|gb|EGF09705.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK1057]
          Length = 420

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|34592231|gb|AAQ76312.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592233|gb|AAQ76313.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQD 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|324990073|gb|EGC22014.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK353]
          Length = 419

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|319793646|ref|YP_004155286.1| gcn5-related N-acetyltransferase [Variovorax paradoxus EPS]
 gi|315596109|gb|ADU37175.1| GCN5-related N-acetyltransferase [Variovorax paradoxus EPS]
          Length = 899

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 89/235 (37%), Gaps = 28/235 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K+LL  +++P+ + ++  S + A      L  P+  +K         K   + +
Sbjct: 481 LTEMESKSLLSCFHIPITRTLLARSANEAMMIATQLGFPV-ALKIDSP-DISHKSDVEGV 538

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
             +   G     +   ++  +  +              +R+N V V+        RE+Y+
Sbjct: 539 ALNVLNGTSARDTYVEMMERVARL-----------APEARINGVTVQKMVKARRGREIYV 587

Query: 121 SLLVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G    +    G M     D         Q +   LI+      S    +L +
Sbjct: 588 GLVTDEPFG-PVIVFGAGGTMIELMNDRAMELPPLNQFLAHRLIE-----RSRVAETLGE 641

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                        D+   + +  C+  ++  ++INP+I+ ++G +  +D++I  D
Sbjct: 642 WRGANPVNMEALEDVLLRVSEMVCELPELREMDINPIIVDEHGAV-SVDARIVVD 695


>gi|34592207|gb|AAQ76300.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.7 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       ++++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFENYADKMKEVDLKIYVRRGGPNY 111


>gi|327398758|ref|YP_004339627.1| phosphoribosylamine--glycine ligase [Hippea maritima DSM 10411]
 gi|327181387|gb|AEA33568.1| Phosphoribosylamine--glycine ligase [Hippea maritima DSM 10411]
          Length = 424

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 23/142 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+KYN+P A+    +S   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDFLKKYNIPTAEYETFTSFEDAKAYIEKKGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +  I  ++ I     I K+ G  G   N V +E+  +     +L +  D  +
Sbjct: 152 GVTVAKTKEEAIKALKSI----FIEKRFGEAG---NRVVIEEFLEGEEASFL-VFSDGEN 203

Query: 129 GMVAFIASTQGGMDIEEVAKDY 150
            +    A     +   +   + 
Sbjct: 204 ILPMIAAQDHKPIYNNDEGPNT 225


>gi|327468011|gb|EGF13501.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK330]
          Length = 420

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|304939635|emb|CBH30834.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTRDKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A++E      +++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIHALEEYQDKLKEVDTKIYVRRGGPNY 111


>gi|307594352|ref|YP_003900669.1| carbamoyl-phosphate synthase large subunit [Vulcanisaeta distributa
           DSM 14429]
 gi|307549553|gb|ADN49618.1| carbamoyl-phosphate synthase, large subunit [Vulcanisaeta
           distributa DSM 14429]
          Length = 1030

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 26/127 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K+ +PV       S++ A SA + L  P+    +++     G G F         
Sbjct: 129 KDLMNKHGIPVLPSKTTYSLNEALSAARELGYPVL---ARVSFNLGGAGAFV-------- 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                     +IS   + L  +            +  V +E      +E+   ++ D+  
Sbjct: 178 ----AHDDDELISKYHKALAMS-----------EIKEVLIEKYIGGWKEIEFEVMRDQYG 222

Query: 129 GMVAFIA 135
             VA + 
Sbjct: 223 ESVAVVC 229


>gi|304939659|emb|CBH30846.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK-----INIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +     +++ + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKAVDVKIYVRRGGPNY 111


>gi|114761144|ref|ZP_01441059.1| CoA-binding protein [Pelagibaca bermudensis HTCC2601]
 gi|114545392|gb|EAU48394.1| CoA-binding protein [Roseovarius sp. HTCC2601]
          Length = 701

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E  AKA L      V +G+V  +   A      L G + V   +I +   G         
Sbjct: 488 EADAKAFLAANGFDVPRGMVAETAADAGPLADRLGGAVVV---KILSAEIG-------HK 537

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV++  +  +  +   E+        +       +    +E+ A    E+ L L  
Sbjct: 538 TELGGVQLNLNGATASAAAEEMGARI----REVAPDLELRGFLIEEMAAPGVEMILGLSR 593

Query: 125 DRTSGMVAFIA 135
           D   GMV  + 
Sbjct: 594 DPVFGMVLTVG 604


>gi|222053277|ref|YP_002535639.1| CoA-binding domain protein [Geobacter sp. FRC-32]
 gi|221562566|gb|ACM18538.1| CoA-binding domain protein [Geobacter sp. FRC-32]
          Length = 695

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 22/220 (10%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +   Y +PVA   V  +   A +A   +  P+ VVK    A         +  +D  G  
Sbjct: 496 IFEAYGIPVAGWGVTVNTAEAVAAADRIGYPV-VVKVDCEA--------IDHKSDMGGVA 546

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
                  SV + + ++       ++ G  G+     +V+      REL +    +R  G 
Sbjct: 547 VNLKDAASVQATVEDM------QRRLGHFGTL--KFFVQKFLPGGRELIIGATAERGLGH 598

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQARIDGGD 189
           +       GG+ +E +     +      ++    ++S    A L  +   +G  R    +
Sbjct: 599 LVMFG--LGGIYVEVLKDVSFKIAPVTQVEAEEMLSSLRTAALLNGVRGEKGINREAVMN 656

Query: 190 LFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISF 228
           +     +   D  M   +++NPL+   +G    +D +I  
Sbjct: 657 IIQRASQLLGDLPMIQEMDMNPLMAFADGAF-AVDGRIRI 695


>gi|332797732|ref|YP_004459232.1| acetyl coenzyme A synthetase alpha domain-containing protein
           [Acidianus hospitalis W1]
 gi|332695467|gb|AEE94934.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Acidianus hospitalis W1]
          Length = 660

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 78/223 (34%), Gaps = 28/223 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+A  L+  Y +   K  ++ S   A+    ++  P+ +               K L   
Sbjct: 466 YEALKLMEIYGIKTPKWGIVQSEEEAQRVADSIGYPVVM----------KISADKPLHKT 515

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +      V S  +++                   V +++      E+++  L D
Sbjct: 516 EMKGVVMNVEKDMVKSVYKQL-------------SQITKRVMIQEQLT-GLEVFVGGLKD 561

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G    + S  GG+ +E V K+    I  +  D  + +  E           +G    
Sbjct: 562 PVFGHTVLVGS--GGIYVE-VLKNVSYGISPVYEDEALEMLKESKVHDMLTARKRGYDEG 618

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                   + +   D ++  ++INPLI+ +NG    +D +I F
Sbjct: 619 SLIRTIVTVSRMIVDLNIKEMDINPLIVNENGAF-AVDVRILF 660



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 30/150 (20%)

Query: 264 ALDGNIGCMVNGAGLAMATMDIIKLYGGA---------------------PANFLDVGGG 302
            + G+I  + N  G  + T D I   G                       P N LD+ G 
Sbjct: 291 PIKGDILVVTNSGGHGVLTSDAISRSGLNMVDIPDRIKDELRKILPVTSLPKNPLDLSGD 350

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGA 362
           A +D+ A A KI+      K +++     ++ C  + K +L+   +  + +     + G 
Sbjct: 351 AGRDRYAEAMKIVQDLDCTKLVIVQSL-PVVSCSEVAKVLLNYKGKGVVGV-----MMGV 404

Query: 363 NVDIGNRLIAESGLNVITAIDLDDAAQKIV 392
           + D   R++  + +    A +  +AA + +
Sbjct: 405 DEDSALRILESASIP---AFNFPEAAVRAI 431


>gi|85539413|emb|CAJ57322.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDSANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|219670027|ref|YP_002460462.1| carbamoyl-phosphate synthase, large subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219540287|gb|ACL22026.1| carbamoyl-phosphate synthase, large subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 1065

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 75/228 (32%), Gaps = 41/228 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           ++L+R+   PV   V++S +  A S  + +  P+ V  +    G             + G
Sbjct: 139 RSLMRELGEPVPPSVIVSDLEEALSFGEEIGYPVIVRPAYTLGG-------------TGG 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +    +  L ++L           ++ + VE      +E+   +L  R S
Sbjct: 186 GI--AHNREQLKEIAKSGLQASL-----------IDQILVEKSVAGWKEIEYEVL--RDS 230

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQG 181
                       MD   V          +++ P   +T  +V         +   L ++G
Sbjct: 231 QGNCITICNMENMDPVGVHTG-----DSMVVAPCQTLTDREVQALRTSSRKIVAALGIEG 285

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
              +        L     + +  L   + L     G     + +KI+ 
Sbjct: 286 GCNVQYALHPERLEYVVIEVNPRLSRSSALASKATGYPIAKVAAKIAL 333


>gi|225390332|ref|ZP_03760056.1| hypothetical protein CLOSTASPAR_04085 [Clostridium asparagiforme
           DSM 15981]
 gi|225043604|gb|EEG53850.1| hypothetical protein CLOSTASPAR_04085 [Clostridium asparagiforme
           DSM 15981]
          Length = 426

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A      +  AA   ++T P P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYETFDTPEAALEYLETAPVPV-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +     ++ +    ++ KQ G  G   + + VE+         +S+L    
Sbjct: 152 -GVLICNTREEAREGVKTL----MLDKQFGSAG---DRIVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIRIMTSAQD 212


>gi|114776861|ref|ZP_01451904.1| phosphoribosylamine--glycine ligase [Mariprofundus ferrooxydans
           PV-1]
 gi|114552947|gb|EAU55378.1| phosphoribosylamine--glycine ligase [Mariprofundus ferrooxydans
           PV-1]
          Length = 427

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 120/344 (34%), Gaps = 58/344 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ +  VP A+  V   V+ A   I++   P+ V+K+   A G+             
Sbjct: 106 SKRLMYEAGVPTARFEVHVDVNEAVDTIRSWGAPI-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + K  I   R++L         G  G   + V +E+   +  E   S L   +
Sbjct: 152 -GVIVARTEKEAIDAARDMLA----GNSFGDAG---SQVIIEECL-VGEE--ASCLFIVS 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR--I 185
              +  +AS+Q    + +  K  P         P   VT E    + + +     A    
Sbjct: 201 GDTILPLASSQDHKALLDGDKG-PNTGGMGAYSPAPCVTDEVADEVLETIARPIIAALKK 259

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDV 245
            G +    LY                +++ +  ++ L+  + F D        +  L+  
Sbjct: 260 KGAEFIGTLY--------------AGVMLTDDGVKTLEFNVRFGDPE--CQPLMSRLK-- 301

Query: 246 SEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ 305
           S+     + A +  L  + L+   G            + ++    G P NF         
Sbjct: 302 SDLGEVLLAAAERRLDGVQLEWEAGT----------ALCVVVTSDGYPGNFDKGQVIGGL 351

Query: 306 DKVAAAFKIITS--DSSVKGILINIFGGIMRCDVLVKGILSAVK 347
           D + AA  ++     +   G+++N  G ++    + + +  A +
Sbjct: 352 DDMEAAGALVFHAGTAEKDGMIVNSGGRVLGVTAVAQSVSQAQR 395


>gi|326317241|ref|YP_004234913.1| GCN5-like N-acetyltransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374077|gb|ADX46346.1| GCN5-related N-acetyltransferase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 897

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 82/238 (34%), Gaps = 28/238 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  + VPV K ++  S H A      L  P+  +K                
Sbjct: 482 LTEMESKTLLAAFQVPVTKTLLARSAHEAMMIATQLGFPV-ALKID--------SPDIAH 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D  G      +  +      +++            G+R+N V V+  A     RE+ +
Sbjct: 533 KSDVGGVALDIHTGTAARDAYTDMVQRV----ARLQPGARINGVTVQKMARARRGREICI 588

Query: 121 SLLVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G         G M     D         Q + + LI+      S    +L +
Sbjct: 589 GLVTDDPFG-PVITFGAGGTMIELIDDRAMELPPLNQFLARRLIE-----RSRVAETLGE 642

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                   R         + +  C    +  ++INPLI+   G +  +D++I   D A
Sbjct: 643 WRGASAVDRDALEQTLLRVSEMVCALPQLREMDINPLIVDAGG-VVAVDARIVVRDTA 699


>gi|157150927|ref|YP_001451340.1| phosphoribosylamine--glycine ligase [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075721|gb|ABV10404.1| phosphoribosylamine--glycine ligase [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 419

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|112490214|pdb|2CSU|A Chain A, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3
 gi|112490215|pdb|2CSU|B Chain B, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3
          Length = 457

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDK 307
           +    N  G  + T D +   G   A                     N +D    A  + 
Sbjct: 296 VAIXTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPXAAVKNPVDXIASARGED 355

Query: 308 VAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL-EGA 362
                K++  D +V  +    ++  F G    +   +GI+ AVKEV    P++     G 
Sbjct: 356 YYRTAKLLLQDPNVDXLIAICVVPTFAGXTLTEH-AEGIIRAVKEVNNEKPVLAXFXAGY 414

Query: 363 NVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVKGV 398
             +    L+ ++G+       D+  AA  +V   K V
Sbjct: 415 VSEKAKELLEKNGIPTYERPEDVASAAYALVEQAKNV 451


>gi|325689127|gb|EGD31134.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK115]
          Length = 420

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|320160964|ref|YP_004174188.1| putative acetyl-CoA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994817|dbj|BAJ63588.1| putative acetyl-CoA synthetase [Anaerolinea thermophila UNI-1]
          Length = 701

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQDKVA 309
            + N  G A    D + ++G + AN                      +D+ GGA+ +   
Sbjct: 303 ILTNSGGPAALASDSLGMHGFSLANLEKETQEVLRSHLNPSAQVSNPVDMLGGAEPEDYE 362

Query: 310 AAFKIITSDSSVKGIL-INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN-VDIG 367
            +FK +  D +V  +L I +   +++ + +   I++A K   ++ P++    G   V   
Sbjct: 363 RSFKELAKDPNVDILLPILVPQALIKAEKVADAIVNAAK--GLDKPVLCCFMGDEAVQEA 420

Query: 368 NRLIAESGLNVITAID 383
            R++ ++G  + T  D
Sbjct: 421 RRVLHKNGFPMFTFPD 436



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 40/232 (17%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKG 68
           +L  Y +PV  G   ++++ A+   +     +   +V   I              +D  G
Sbjct: 491 ILEAYGIPVIAGGFAANLNEAQKLYQEFGPSVVMKIVSPHIL-----------HKSDVGG 539

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 + + + +   +++      KQ  P  + +  V +E  A   +E+ + +  D   
Sbjct: 540 IRIGIRNPEELEAAYHQMMEEV---KQKMPE-AMIEGVLIEKMAPKGQEVIIGMKRDPVF 595

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE---------- 178
           G    +    GG+ +E              I P   V  ++   +    +          
Sbjct: 596 G-PLLMF-GFGGIFVEVFQDVA------FRIAP---VDHQEAREMVFETKSGKLLTGYRN 644

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINP-LIIMKNGRLRVLDSKISF 228
           L         +    L +   D   ++ +EINP L++ K   +  LD +I  
Sbjct: 645 LPEFDVEGIVEGIQRLGQLALDFPQIAEVEINPCLVLPKGQGVLALDGRIVL 696


>gi|271963526|ref|YP_003337722.1| CoA-binding domain-containing protein [Streptosporangium roseum DSM
           43021]
 gi|270506701|gb|ACZ84979.1| CoA-binding domain protein [Streptosporangium roseum DSM 43021]
          Length = 711

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 114/354 (32%), Gaps = 60/354 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++ KALLR+  V V +G   +S     +A   L  P  V+K+              +  
Sbjct: 15  EHEVKALLREAGVAVPRGATAASAEGVAAAAGGL-TPPLVLKA---------FGPGLVHK 64

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G VR+  +  +  +     +   L+ +   P G       VE+ AD   EL + ++ 
Sbjct: 65  SDSGAVRLALAGPAEAAGAAAEMLGGLLAQGITPDG-----FLVEEQADPGVELIVGVVR 119

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML------- 177
           D        +A   GG+  E +     +            V+  D   +   L       
Sbjct: 120 D-PGFGPVLLAGL-GGVWTEALRDTAVRVCP---------VSEADARRMLASLRGSRLLR 168

Query: 178 ELQGQARIDGGDLFPNLYK------AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
             +G+   D   L   L         +   ++   E+NP+I    G +  +D++      
Sbjct: 169 GYRGRPAADMDALVKLLLTIGGAGGLWERLELGEFELNPVIATGRGAV-AVDARYIPGG- 226

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
                          EE  R   A + + + +     +  +   A         ++ Y  
Sbjct: 227 -------------PREEAPRPAPAAETDFTALFEPRAVAVVGASASRPNFGNMFLEFYRA 273

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVL---VKGI 342
                + V   AD+     A     +D+     L+ +  G  RC  +     GI
Sbjct: 274 TGVPLVAVHPEADEIDGVPAVPT-LADADADYALVAVPAG--RCAEVVRQADGI 324


>gi|333027644|ref|ZP_08455708.1| putative carboxylase [Streptomyces sp. Tu6071]
 gi|332747496|gb|EGJ77937.1| putative carboxylase [Streptomyces sp. Tu6071]
          Length = 854

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 26/173 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L  +  VP A+ V + SVH A  A  T+  P+ V+K   HA              +  
Sbjct: 554 RRLFAEAGVPSARSVRVQSVHEAAQAAATIGYPV-VLKPASHA--------------ASI 598

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV   S  +   +       +     + GP G     V VE+  D      +S+     +
Sbjct: 599 GVIKASRPE---ALAEAWEFANAGAGEQGPEGH---GVLVEEYLDGPE---ISVECMTFA 649

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           G    +A T+  +      ++    + +   D L+ + S         L +  
Sbjct: 650 GETVALAVTRKEVSFAPFFEEVGHTVERD--DSLLPLVSPVARQALAALGVTD 700


>gi|119897952|ref|YP_933165.1| hypothetical protein azo1661 [Azoarcus sp. BH72]
 gi|119670365|emb|CAL94278.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 895

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 92/234 (39%), Gaps = 24/234 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E ++KALL  + +P+A+ V+  S   A    + +  P+ +         + +     L
Sbjct: 491 LNEMESKALLAAFRIPIAQTVIARSATEAMVLAEEIGLPVVMKIDSPSIIHKSESGGVRL 550

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
              S   VR     + +  ++R+               + +N V +E        REL +
Sbjct: 551 NLGSLAAVRTAY--QEIQDEVRK-----------NRPEAAINGVAIEPMILKRNGRELMV 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +  D   G        +GG  +E   +VA   P     L  D +   ++     L D  
Sbjct: 598 GVRRDPVFG-PVITF-GEGGNRVEANRDVAVALPPLNNYLAGDLIR--STRVHRLLGDFR 653

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
            L          +   + +  C+   ++ ++INPLI+ +NG +  +D++I  D+
Sbjct: 654 NLPPVDMEALELVLLRVSEMVCELPWITEMDINPLIVDENGAV-AVDARIVVDN 706


>gi|329905042|ref|ZP_08273977.1| Cyanophycin synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547778|gb|EGF32551.1| Cyanophycin synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 831

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +S V  A  A   +  P+ VVK     G +GKG    + +  + 
Sbjct: 184 KKLLSAAGVPVPNGRAVSDVDDAWEAALEIGLPV-VVKP--LDGNQGKGVTVNVTSREQL 240

Query: 69  GVRVESSLK 77
                ++ +
Sbjct: 241 AAAYATASE 249


>gi|327401416|ref|YP_004342255.1| carbamoyl-phosphate synthase large subunit [Archaeoglobus veneficus
           SNP6]
 gi|327316924|gb|AEA47540.1| carbamoyl-phosphate synthase, large subunit [Archaeoglobus
           veneficus SNP6]
          Length = 1076

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 37/173 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V +  + + +  A S  + +  P+ V  +    G            
Sbjct: 129 RELFKECMHRIGLEVPRSDIANDISEALSIAEEIGYPVVVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +       L  ++           +N V +E+G    +E  L ++ 
Sbjct: 177 -TGGGI--AYNREELKEIAAHGLEMSM-----------INQVLIEEGVIGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           D  +  V  I S      IE            + + P   +T  +   L D  
Sbjct: 223 D-LADNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDWEYQRLRDAA 268



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L  +  +P  +  +  S+  A+     +  P+ V  S +  G   +  + E   +    
Sbjct: 681 ELCNRLGIPQPENGIAHSIEEAKEIAARIGYPVLVRPSYVLGGRAMEIVYDEETLERYIS 740

Query: 70  VRVESSLK 77
             +E S +
Sbjct: 741 EALEVSPE 748


>gi|304939609|emb|CBH30821.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKLYAETLFDLMTREEDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E      +++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDKLKEVDTKIYVRRGGPNY 111


>gi|306481131|emb|CBN08511.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREPDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGANV 364
           +G ++ I G I     + K   GI+ A +E +  +  V     +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDKLKAVDTKIYVRRGGPNY 111


>gi|26990431|ref|NP_745856.1| acyl-CoA synthetase, putative [Pseudomonas putida KT2440]
 gi|24985400|gb|AAN69320.1|AE016569_4 acyl-CoA synthetase, putative [Pseudomonas putida KT2440]
          Length = 705

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 84/238 (35%), Gaps = 21/238 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  LR + +PV  G V+S+   A +    +  P  V+K+             +L
Sbjct: 484 LDEWQSKQALRAFGLPVPAG-VLSTPERAVADAARVGYP-LVLKA----------VSAQL 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
           P  ++ G  V  +L+   +    ++          P  +  + V +E  A   L EL + 
Sbjct: 532 PHKTEAGA-VALNLRDARALEAALVQMRQCIADYAPQVAF-DQVLLEPMAEPPLAELIVG 589

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +   R +     +    GG+ +E +       +          + +    + L       
Sbjct: 590 I--KRENNFALALVIGAGGVLVELLKDSVSLLLPTTDSAIRAALLNLRSASLLQGFRGRP 647

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISFDDNALYRH 236
                        +    C+    L+E  +NPL++  NG    +D+ I        RH
Sbjct: 648 AANLDALVSAIRAVADYACENAGQLMELDVNPLMVGANGT-TAVDALIRLGQAQGERH 704


>gi|187735121|ref|YP_001877233.1| carbamoyl-phosphate synthase, large subunit [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187425173|gb|ACD04452.1| carbamoyl-phosphate synthase, large subunit [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 1064

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 35/203 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPVAK   + SV  AE     L  P+ V++     GG G G           
Sbjct: 133 KETMDRIGVPVAKSEPVYSVEEAEKVASELGYPV-VLRPAYTMGGTGGG----------- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +++ +   +   L ++L           +N V VE+      EL L ++ D   
Sbjct: 181 ---IVYNVEELRQVVPRGLAASL-----------INQVLVEECVLGWEELELEVVRDAKG 226

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          M +          +  +  +    +       + D + + G   +  
Sbjct: 227 QKITVCFIENVDPMGVHTGDSFCVAPMLTVPQEVQDKLQDYSYR-ILDAIGVTGGTNVQF 285

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                       D  + ++EINP
Sbjct: 286 AHNR-------EDNRIIVIEINP 301


>gi|313498320|gb|ADR59686.1| Acyl-CoA synthetase, putative [Pseudomonas putida BIRD-1]
          Length = 705

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 89/240 (37%), Gaps = 25/240 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  LR + +PV  G V+S+   A +    +  P  V+K+             +L
Sbjct: 484 LDEWQSKQALRAFGLPVPAG-VLSTPERAVADAARVGYP-LVLKA----------VSAQL 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
           P  ++ G  V  +L+   +    ++          P  +  + V +E  A   L EL + 
Sbjct: 532 PHKTEAGA-VALNLRDARALEAALVQMRQCIADYAPQVAF-DQVLLEPMAEPPLAELIVG 589

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +  +    +   I +  GG+ +E +       +     D  I      + S   +   +G
Sbjct: 590 IKREHDFALALVIGA--GGVLVELLKDSVSLLLPTT--DSAIRAALLSLRSASLLQGFRG 645

Query: 182 QAR---IDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISFDDNALYRH 236
           +              +    C+    LLE  +NPL++  +G    +D+ I        RH
Sbjct: 646 RPAANLDALVSAIRAVADYACENAGHLLELDVNPLMVGADGT-TAVDALIRLGQTQGERH 704


>gi|222109852|ref|YP_002552116.1| cyanophycin synthetase [Acidovorax ebreus TPSY]
 gi|221729296|gb|ACM32116.1| cyanophycin synthetase [Acidovorax ebreus TPSY]
          Length = 723

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G ++ +   A    + +  P+ V  S          R   L    + 
Sbjct: 225 KRLLASCGVPVPEGQIVRNADEAWEVAQEIGFPVTVKPS-----DGNHARGVTLELSREA 279

Query: 69  GVRVESSLKS 78
            ++   +L  
Sbjct: 280 DIKAAFALAE 289


>gi|34592249|gb|AAQ76321.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTAETRFYAETILDLTTREKDPLG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|298675798|ref|YP_003727548.1| acetyl coenzyme A synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288786|gb|ADI74752.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanohalobium evestigatum Z-7303]
          Length = 697

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 56/240 (23%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKISFD----------DNALYRHLDI------QE 241
           F D    +  I P++++K+GR       +S             NA +R   I      QE
Sbjct: 220 FIDIARRVTSIKPVVMVKSGRTSAGSRAVSSHTGTLAGSDEAYNAAFRQSGIIRADSLQE 279

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF----- 296
           + D     S +   +  N+           + N  G  + T D     G + A+F     
Sbjct: 280 MLDYIRAFSSQPVPEGKNM---------AILTNAGGFGILTADACYNEGLSLASFDESTI 330

Query: 297 ----------------LDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLV 339
                           +D+ G A  D  A A  ++  D  V GI++      +   D + 
Sbjct: 331 QALRENLPPNSNLYNPVDLLGDAGSDLYAFAIDVLLEDPHVDGIIVLTSPQAMTEVDKVA 390

Query: 340 KGILSAVKEVKINIPLVMR-LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            GI+ A K      P++   + G  V  G R++ +  +            ++ V +++ +
Sbjct: 391 -GIV-ADKVQTSTKPILCSFVGGTQVSEGERILNDYSIPNYPFP------ERAVASMRAL 442



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 44/238 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++  +LR Y +P  K  ++ ++  A  A K +  P+ +                      
Sbjct: 484 ESLDILRAYEIPTVKTKIVKNLKEAIKACKQIGYPVVM----------KIVSPDISHKTD 533

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGVR+  +L +     R          +  P    +  V V++     +E+ + +  D 
Sbjct: 534 VGGVRL--NLNNADDVERAYHTMMADVYRYMPDAD-ITGVQVQEMVSGGKEVIIGMNQDV 590

Query: 127 TSGMVAFIASTQGGMDIE--------------EVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
             G    +    GG+ +E              + AK     I    I             
Sbjct: 591 QFG-PLLMF-GMGGIYVELLKDVSFNVAPINRDEAKHMISSIKTYPI------------- 635

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
           L  +   +        D    + +   D   +  L+INPL+++ + +    +D +++ 
Sbjct: 636 LAGIRGEKPYDINSVADTLIKISQLVNDFPQILELDINPLVVLPDNQGCVAMDLRLTL 693


>gi|148242921|ref|YP_001228078.1| phosphoribosylamine--glycine ligase [Synechococcus sp. RCC307]
 gi|147851231|emb|CAK28725.1| Phosphoribosylamine--glycine ligase [Synechococcus sp. RCC307]
          Length = 431

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 20/96 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++  VP A   V +S    ++  +   G  +VVK+   A G+             
Sbjct: 111 AKTLMQQAGVPTAGFWVATSAEQGKAIAEE-QGKAFVVKADGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  SL+  ++ I E       + + G  G RV
Sbjct: 157 -GVTVACSLEETLTAIEECF-----SGRFGDAGQRV 186


>gi|34592257|gb|AAQ76325.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + +   +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKTCVRRGGPNY 111


>gi|327460116|gb|EGF06455.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK1]
          Length = 420

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|34592191|gb|AAQ76292.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGIEDLANYGEYSGGPTTAETRXYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN-----IPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E         + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFRGIIQAFEEYADKMKDTGVRIYVRRGGPNY 111


>gi|297564682|ref|YP_003683654.1| ATP-dependent carboxylate-amine ligase domain-containing protein
           [Meiothermus silvanus DSM 9946]
 gi|296849131|gb|ADH62146.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Meiothermus silvanus DSM 9946]
          Length = 388

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L ++  + VA+G V  +   A + +K +  P+ V K  +  G
Sbjct: 117 KKLFQQAGLRVARGRVCHTPEEARAFVKEVGYPV-VAKPDVGVG 159


>gi|41352955|gb|AAS01099.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGETRFYAETILDLMTREKDPKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E      ++ + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKEVGVRVYVRRGGPNY 111


>gi|27262160|gb|AAN87361.1| Phosphoribosylamine--glycine ligase [Heliobacillus mobilis]
          Length = 438

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 30/147 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA------ESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +K L++KY +P A   V + V  A       +A KT+ G   VVK+   A G+       
Sbjct: 114 SKDLMQKYGIPTASYGVFTEVEPALAFVDELAARKTIAGSPCVVKADGLAAGK------- 166

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                  GV V   +      +R +L         G  G   + V +E+  +      +S
Sbjct: 167 -------GVIVAKDVTEAKEAVRSMLE----GNAFGSAG---SRVVIEEFMEGEE---VS 209

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAK 148
           +L       V  + S Q    I +  +
Sbjct: 210 ILAFTDGDHVIPMVSAQDHKRIFDNDE 236


>gi|41353057|gb|AAS01150.1| AclB [uncultured prokaryote]
          Length = 108

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHKDPRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
            ++ I G I     + K   GI++A ++      +    + +R  G N
Sbjct: 61  KILIIGGAIAXFTDVAKTFTGIINAFEKYADKLKEHKTKIYVRRGGPN 108


>gi|239820791|ref|YP_002947976.1| CoA-binding domain protein [Variovorax paradoxus S110]
 gi|239805644|gb|ACS22710.1| CoA-binding domain protein [Variovorax paradoxus S110]
          Length = 698

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 92/241 (38%), Gaps = 38/241 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E QAK L  ++ VP A+ +V+++   AE+A + L G + V+K             + 
Sbjct: 480 SLDEAQAKQLFTRFGVPCAREMVVATPAEAEAAARELGGRV-VLKI---------LSAEI 529

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV V  S ++V + ++ +          GP         V++      EL L 
Sbjct: 530 THKSDVGGVAVNLSAETVGARLQAMAAEVESKAGVGP-----RRFLVQEMVGGGTELILG 584

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D     +       GG+  E +     + +         G++ ED  S+   L    
Sbjct: 585 MHRDPLGTAILL---GMGGITAELLKDTTMRLLPLQ-----GGLSREDALSMARELKTWP 636

Query: 178 ---ELQGQARIDGGDLFPNLYKAFCDKDMSL------LEINPLIIMKNGR-LRVLDSKIS 227
                +G+ + D   L   +  AF D    L       EINP+ ++  G+ +R  D  + 
Sbjct: 637 LLDGFRGRPKADVKALVDAIV-AFSDMAARLGERLLEAEINPVFVLPEGQGVRAADGVVV 695

Query: 228 F 228
            
Sbjct: 696 L 696


>gi|86606404|ref|YP_475167.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           JA-3-3Ab]
 gi|86554946|gb|ABC99904.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
           JA-3-3Ab]
          Length = 1074

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 37/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V +  +  S+  A+     +  PL +  +    G            
Sbjct: 129 RELFKQAMQRLGLAVPRSGLARSLAEAKQIAHEIGYPLIIRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    + +                   G   S V+ + VE+     +E  L ++ 
Sbjct: 177 -TGGGV--AYNQEEFEEICAA-----------GLEASPVSQILVEESVIGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE +          + + P   +T ++   L D
Sbjct: 223 D-LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 266



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +      +  SV  +    + +  P+ V  S +  G
Sbjct: 677 RLLEELGIRQPAHGLARSVEESLEIARRIGYPVVVRPSYVLGG 719


>gi|85858637|ref|YP_460839.1| acyl-CoA synthetase [Syntrophus aciditrophicus SB]
 gi|85721728|gb|ABC76671.1| acyl-CoA synthetase [Syntrophus aciditrophicus SB]
          Length = 727

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 21/227 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E++ K +L    +     +V  S   A      L  P+ V+K               +
Sbjct: 52  LMEHECKEILENMGIATTGFLVAGSEDEAVEMSNKLGYPV-VLKIV---------SPDVV 101

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV++  + +  +      +  T   +     G  V       G     E  + +
Sbjct: 102 HKTDSGGVKLNLAGEDAVRQAYRAMVDTFKYQHII--GIAVQK-MAAPGV----EAIVGV 154

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D  S     +    GG+ +E +     + +     D    +       L      +  
Sbjct: 155 TRD-PSFGPVLMFGL-GGIFVEVLKDVTFRVLPVTAQDIDEMIREIKGYPLLKGYRGKAV 212

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  L   +        ++  L++NP+ +  +G +  +D+++  
Sbjct: 213 DIDALKTLLLKISDFIMAFPEVRELDLNPVFLYPSGNV-AVDARMFV 258


>gi|108804314|ref|YP_644251.1| carbamoyl-phosphate synthase large subunit [Rubrobacter
           xylanophilus DSM 9941]
 gi|122975987|sp|Q1AVY9|CARB_RUBXD RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|108765557|gb|ABG04439.1| carbamoyl-phosphate synthase large subunit [Rubrobacter
           xylanophilus DSM 9941]
          Length = 1054

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
            LLR+  +P  +    ++   A    + L  P+ V  S +  G R +
Sbjct: 659 RLLRELGIPHPRFGTATTAAEAREVARRLGYPVVVRPSYVLGGRRME 705



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 67/221 (30%), Gaps = 52/221 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R+      + V +   + SV  AE   + +  PL +                    
Sbjct: 129 RQLFREAMERIGLRVPESRTVRSVPEAEELAERIGFPLII--------------RPSFTL 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG  V   L ++ + +R+ L ++            V  V VE      +E  L ++ 
Sbjct: 175 GGTGG-SVAEDLDALRASVRDGLDAS-----------PVRSVLVERSVAGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D  +  V  + S      IE V          + + P   ++             +   +
Sbjct: 223 D-LADNVVIVCS------IENVDPMGVHTGDSITVAPAQTLSDRQYQSLRTAAIRIIREI 275

Query: 178 ELQ-GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            +  G + I                D  ++E+NP +   + 
Sbjct: 276 GVSTGGSNIQFAVNPEG-------DDFYVIEMNPRVSRSSA 309


>gi|288931855|ref|YP_003435915.1| ATP-grasp domain protein [Ferroglobus placidus DSM 10642]
 gi|288894103|gb|ADC65640.1| ATP-grasp domain protein [Ferroglobus placidus DSM 10642]
          Length = 217

 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 74/226 (32%), Gaps = 35/226 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + +L  YN+PV K  V  S   A  A +    P  V+K             K      KG
Sbjct: 21  RKVLEDYNIPVLKYKVAKSEDEAVKAAEEFGYP-LVMKI---------ITAKGEHKTEKG 70

Query: 69  GVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GV +   S + +I   R++        Q    G     V +        EL++    D  
Sbjct: 71  GVVLDIRSKEELIDSFRKL-------SQMSEYG-----VLISPMVK-GIELFVGAFQDEQ 117

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT----SEDVASLCDMLELQGQA 183
            G V    +  GG  +E              ID    +     ++    L    + + + 
Sbjct: 118 FGGVVAFGT--GGKFVEIYKDVS---YRVTPIDREEALRMIRETKVYRILLGYRDEKPRD 172

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                +L  NL +   +  ++  +++NP   +  G     D++   
Sbjct: 173 IEKIAELLVNLSRLVEENPEIKEIDLNPTFSLPEGVFVA-DARFIL 217


>gi|34592217|gb|AAQ76305.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|41353023|gb|AAS01133.1| AclB [uncultured prokaryote]
 gi|41353033|gb|AAS01138.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADAIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|322386405|ref|ZP_08060035.1| phosphoribosylamine-glycine ligase [Streptococcus cristatus ATCC
           51100]
 gi|321269629|gb|EFX52559.1| phosphoribosylamine-glycine ligase [Streptococcus cristatus ATCC
           51100]
          Length = 420

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 98/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIERQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAYEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTVDGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+++      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNITWTDKGVTLGVVVASNGYPLDYEKGVEL 348


>gi|225574486|ref|ZP_03783096.1| hypothetical protein RUMHYD_02563 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038273|gb|EEG48519.1| hypothetical protein RUMHYD_02563 [Blautia hydrogenotrophica DSM
           10507]
          Length = 1068

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 61/201 (30%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  + +   A+ A   L  P+ V  S +  GG+G              
Sbjct: 673 QILEECEIPRPKGHTVYTAEEAKKAANELGYPVLVRPSYVL-GGQGMQIAIND------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 ++  I  I  I     I       G  +    V DG     E+ +  +++    
Sbjct: 725 ----QDVEEFIGIINRIAQEHPILVDKYLMGKEIEVDAVCDG----EEILIPGIMEHIER 776

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                A    G  I         +  K  I        E    L   L + G   I    
Sbjct: 777 -----AGIHSGDSISVYPAQTISETAKKTI-------EEYTRRLAKSLHVIGMINIQF-- 822

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                    C +++ ++E+NP
Sbjct: 823 -------IVCGEEVYVIEVNP 836


>gi|126665036|ref|ZP_01736019.1| Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Marinobacter sp. ELB17]
 gi|126630406|gb|EBA01021.1| Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Marinobacter sp. ELB17]
          Length = 372

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 75/269 (27%), Gaps = 62/269 (23%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +  +P  +  +  S     +A + L  P+ V KS                     
Sbjct: 99  KTLFGQLGIPTPQWKIADSAETLRAAAEELGCPV-VAKS-------------NTEGYDGK 144

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  S +   +  + I             G     + VE   D  RE  LS++  R  
Sbjct: 145 GQAVLKSSEDAAAAWQSI-------------GHP--RLMVEKFVDFSRE--LSIIAVRAE 187

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                               D+ Q I +  + P   +                  + +  
Sbjct: 188 CGDVAF--------YPMADNDHHQGILRYSVAPAPKLQP--------------HLQSEAE 225

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEE 248
           D    L     + D   +    L    NG L   +      ++    H  I+     S+ 
Sbjct: 226 DYIRGL---LTELDYVGVLTLELFETPNG-LVANEMAPRVHNSG---HWTIEG-AMTSQF 277

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAG 277
           ++       H L  +   G + CM+N  G
Sbjct: 278 ENHVRAVSGHALGNVEPRG-VSCMINIIG 305


>gi|121593082|ref|YP_984978.1| cyanophycin synthetase [Acidovorax sp. JS42]
 gi|120605162|gb|ABM40902.1| cyanophycin synthetase [Acidovorax sp. JS42]
          Length = 727

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G ++ +   A    + +  P+ V  S          R   L    + 
Sbjct: 225 KRLLASCGVPVPEGQIVRNADEAWEVAQEIGLPVTVKPS-----DGNHARGVTLELSREA 279

Query: 69  GVRVESSLKS 78
            ++   +L  
Sbjct: 280 DIKAAFALAE 289


>gi|85539419|emb|CAJ57325.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++  + +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYAVKMKDVGARIYVRRGGPNY 112


>gi|308161477|gb|EFO63922.1| Acetyl-CoA synthetase [Giardia lamblia P15]
          Length = 715

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 81/244 (33%), Gaps = 50/244 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            +   Y V   K  + ++   A    K +  P+   +V  QI            +     
Sbjct: 495 EIFTLYGVNAPKTKLATTEAEAAKFAKEVTFPVVMKIVSPQI------------IHKSDC 542

Query: 68  GGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-----ELYLS 121
           GGV++   +     +  +EI+ +     + GP G+ +  V ++   D  +     E+ + 
Sbjct: 543 GGVKLNIKTEAEATAAFKEIMAN---AAKNGPKGAVLKGVEIQQMVDFSKYQKTTEMIVG 599

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D  +     +   QGG+        Y   I  +  D       ED  +         
Sbjct: 600 VNRD-PTWGPMIMV-GQGGI--------YANYIKDVAFDLAYKYDREDAETQLKRTKVYE 649

Query: 178 ------ELQGQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGR------LRVLDS 224
                            D    L +   D  +++ L++NPL++ +  +      +  +D 
Sbjct: 650 ILNGVRGQPRSDIKGLLDTMVKLAQLVNDFSEITELDMNPLLVFEEQKEGKNPGIAAVDV 709

Query: 225 KISF 228
           KI+ 
Sbjct: 710 KITL 713


>gi|299535251|ref|ZP_07048575.1| phosphoribosylamine--glycine ligase [Lysinibacillus fusiformis ZC1]
 gi|298729372|gb|EFI69923.1| phosphoribosylamine--glycine ligase [Lysinibacillus fusiformis ZC1]
          Length = 418

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A     +    A + IK    P+ V+K+   A G+             
Sbjct: 106 AKEIMNKYNIPTAAHETFTEAEKAIAYIKEQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  + +++G+          G   + V VE+  D     ++S +    
Sbjct: 152 -GVVVAMTEEEAIEAVEDMIGNQRF-------GESSSRVVVEEFLDGEEFSFMSFVHKGQ 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 IY-PMVIA 210


>gi|41352977|gb|AAS01110.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K  ++++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYANKMKEVDLKIYVRRGGPNY 111


>gi|189425815|ref|YP_001952992.1| phosphoribosylamine--glycine ligase [Geobacter lovleyi SZ]
 gi|189422074|gb|ACD96472.1| phosphoribosylamine/glycine ligase [Geobacter lovleyi SZ]
          Length = 424

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 22/120 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KYN+P A   V + + AAE+ I+    P+ VVK+   A G+             
Sbjct: 106 SKDLMHKYNIPTAAYGVFTEIPAAEAFIRKTGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +    I  ++++L         G  G   + V VE+        +L++   R 
Sbjct: 152 -GVIIAQTEAEAIEAVQDML----SGNAFGDAG---SRVVVEEFLTGEEASFLAITDGRF 203


>gi|157382762|gb|ABV48818.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 112

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|323097769|emb|CBJ18446.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        DS  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREPDSKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       ++ + + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGVKIYVRRGGPNY 111


>gi|300786454|ref|YP_003766745.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32]
 gi|299795968|gb|ADJ46343.1| acyl-CoA synthetase [Amycolatopsis mediterranei U32]
          Length = 708

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 93/304 (30%), Gaps = 18/304 (5%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + +A+   Y +P     + ++   A +    +  P+ +         + +     +    
Sbjct: 26  EGRAVCEAYGIPTPAERLAATAEEAVAHAGDIGLPVVLKIVSPDILHKTEAGGVLVGLKD 85

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              V+     + ++ + +               G +V  +  E       E+ +  + D 
Sbjct: 86  TEAVKAGF--EKIVENAKA------YDADARILGVQVQRMLTE-----GHEVIIGSVTDP 132

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           T G +       GG+ +E +     +       + L  +     A +   +       R 
Sbjct: 133 TFGKIVAFG--LGGILVEVLKDVTFRLAPTSTAEALSMIDGIQSAEILRGVRGSAPVDRA 190

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               +   L +   D   +S +++NP++   +G    +D +I  D +A        +   
Sbjct: 191 ALAAVITGLGQLVADFPQLSEVDLNPVLATASG-ATAVDVRILVDPDAAKEPHRFTQEEI 249

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGAD 304
           ++  +     A    +   A  G IG  V    +       I       A  LD    A 
Sbjct: 250 LASMNRIMKPASVAVIGASAEAGKIGNSVLKNLVNGGYAGEIHPINPKAAEILDRKAYAS 309

Query: 305 QDKV 308
              V
Sbjct: 310 ITDV 313


>gi|34592259|gb|AAQ76326.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADAIADFAGIDDLANYGEYSGGPTTGETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|116619310|ref|YP_821466.1| CoA-binding domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222472|gb|ABJ81181.1| CoA-binding domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 912

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 76/243 (31%), Gaps = 44/243 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K +L  Y +PVAK ++  +   A  A   +  P+ V+K                
Sbjct: 506 LTEFESKQVLAAYGIPVAKTIIAVNAPDAVKAANEIGYPI-VLK---------LYSETIT 555

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV++       +      + S++  K        V    V+    +     L +
Sbjct: 556 HKTDVGGVQLNLGTADAVEKAFHAIESSVAEKVGAKHFQGVT---VQPMVKLKDAYELII 612

Query: 123 LVD-RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED---VASLCDMLE 178
                       +  T GG  +E               D  +G+   +      + +  +
Sbjct: 613 GSSLDPQFGPVLLFGT-GGQLVEVFK------------DRALGLPPLNSTLARRMMEQTK 659

Query: 179 ----LQGQARIDGGDLFPNLYKAFCDKDMSLLE--------INPLIIMKNGRLRVLDSKI 226
               L+G       D    L          + E        INPL+   +G L  LD+++
Sbjct: 660 IYTALKGVRGRKPVD-LKALEVLMVRFSALVAEQRWIKEIDINPLLASPDG-LIALDARV 717

Query: 227 SFD 229
              
Sbjct: 718 VVH 720


>gi|254784830|ref|YP_003072258.1| long-chain-fatty-acid--CoA ligase [Teredinibacter turnerae T7901]
 gi|237687112|gb|ACR14376.1| long-chain-fatty-acid--CoA ligase [Teredinibacter turnerae T7901]
          Length = 897

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 93/233 (39%), Gaps = 28/233 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  + +P+A  +++ S   A  A   +  P+ +   +IH         K  
Sbjct: 493 LSETESKTILAAFGIPIAPTILVHSAQEAMEAATEIGLPVAM---KIHG---SNLSNKSS 546

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYL 120
               +  +R   ++K+  + +R IL +     +          + +E         EL L
Sbjct: 547 HGGVQLNIRTLPAVKNTYAGLRRILENLPFAVENPG-------IVIEPMILSPAASELRL 599

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           ++  D   G   FI+   GG+     A    + +    ++ L+       + L DML  +
Sbjct: 600 AIEQDPVFG--PFISLGPGGV-----AAKRTRVVSLPPLNRLLAANLIQESELGDMLSKE 652

Query: 181 GQA----RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           GQ          +   ++    C+  ++  LEINPL+   NG +  +D++I  
Sbjct: 653 GQQPVIALAALENCLMSISDIACELPEVLELEINPLLADSNG-VTAVDARIRL 704


>gi|170781439|ref|YP_001709771.1| phosphoribosylamine--glycine ligase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169156007|emb|CAQ01142.1| phosphoribosylamine-glycine ligase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 416

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 15/107 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP  +     +V   E+A+     P YV+K+   A G+             
Sbjct: 106 AKRIMEEAGVPTGRAAQAGTVDEVEAALDEYGAP-YVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            GV V +     +   R  LG   +  +    G  V+   + DG D+
Sbjct: 152 -GVLVTADRTLALEHARHYLGQGTVLVEEFLAGQEVSLFLLSDGHDV 197


>gi|328944812|gb|EGG38973.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK1087]
 gi|332360240|gb|EGJ38054.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK1056]
          Length = 419

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|323097759|emb|CBJ18441.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K  ++++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEIYADKMKEVDLKIYVRRGGPNY 111


>gi|289166977|ref|YP_003445244.1| phosphoribosylglycinamide synthetase [Streptococcus mitis B6]
 gi|288906542|emb|CBJ21374.1| phosphoribosylglycinamide synthetase [Streptococcus mitis B6]
          Length = 421

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A+  I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKVYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGNKGPNTGGMGAYAPVPHLPESVVATA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGILYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+++      +G +V   G  +     +KL
Sbjct: 304 DFAQNITDILDSKEPNITWTDKGVTLGVVVASKGYPLDYEKGVKL 348


>gi|53802473|ref|YP_112893.1| phosphoribosylamine--glycine ligase [Methylococcus capsulatus str.
           Bath]
 gi|53756234|gb|AAU90525.1| phosphoribosylamine--glycine ligase [Methylococcus capsulatus str.
           Bath]
          Length = 427

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A   V +    AE  I+    P+ VVK+   A G+              
Sbjct: 109 KDFLARHGIPTAAYQVFTDAGEAEDYIRRKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  S    I+ +R++L         G  G RV    VE+      E    ++ D   
Sbjct: 154 GVIVAQSEDEAIAAVRDMLA----GDAFGSAGHRV---VVEEFLP-GEEASFIVMADGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 ALPM 209


>gi|34592205|gb|AAQ76299.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|41353021|gb|AAS01132.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVKIYVRRGGPNY 111


>gi|332701952|ref|ZP_08422040.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552101|gb|EGJ49145.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 697

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           E+QA+ LLR YN+P  +  +  S   A +A   +  P+   +  +QI      K     +
Sbjct: 485 EFQAQELLRAYNLPTPQTRLARSSEEAATAAGEIGYPVVLKIASAQI----SHKSDVGGV 540

Query: 63  PADSKGGVRVESSLKSVISDIREI 86
               K    V  +   + S  + +
Sbjct: 541 AVGLKNLKEVLHAFTDITSRAQRM 564


>gi|294495632|ref|YP_003542125.1| carbamoyl-phosphate synthase large subunit [Methanohalophilus mahii
           DSM 5219]
 gi|292666631|gb|ADE36480.1| carbamoyl-phosphate synthase large subunit [Methanohalophilus mahii
           DSM 5219]
          Length = 1079

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 53/220 (24%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++        V +   ISS+  AE  I  L  P+ V  +    G            
Sbjct: 130 RELFKQTMENIGEKVPRSKAISSLQEAEEVIDELGLPIIVRPAYTLGG------------ 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  + + ++  +    G  L          R+N V VE+     +E    ++ 
Sbjct: 178 ---AGGGIAHTKEELLQIVDR--GIRLS---------RINQVLVEESVLGWKEFEYEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D     +          ++E +          +++ P   +  E+          +   L
Sbjct: 224 DSNDTCIVI-------CNMENIDPMGVHTGESIVVTPSQTLNDEEHQMLRTAAIKIIREL 276

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++G   I              D +  ++E+NP +   + 
Sbjct: 277 GIEGGCNIQFAT---------KDGEYRVVEVNPRVSRSSA 307


>gi|220929593|ref|YP_002506502.1| phosphoribosylamine--glycine ligase [Clostridium cellulolyticum
           H10]
 gi|219999921|gb|ACL76522.1| phosphoribosylamine/glycine ligase [Clostridium cellulolyticum H10]
          Length = 419

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 55/251 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A  +V  +   A   + T   P+ VVK+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYMVFDNCTEALQYLDTCSAPI-VVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +++     ++ ++   +     G  G   + V +E+         +S+L    
Sbjct: 152 -GVIIAKTIQEAREAVKGMMNDKIF----GEAG---SRVVIEEFIQGPE---VSILAFTD 200

Query: 128 SGMVAFIASTQ--------------GGMDIEEVAKDYPQKI----FKLLIDPLIGVTSED 169
              +  + S+Q              GGM     +  Y +K+     K +  P +   +++
Sbjct: 201 GKTIVPMVSSQDHKRVFDNDQGPNTGGMGTFSPSPLYDKKLNDYCMKEIFTPTVEAMNKE 260

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKA-FCDKDMSL----LEINPLIIMK---NGRLRV 221
                 +L        DG  +    Y A F D +  +    L+ + L+I +   + RL  
Sbjct: 261 GRKFKGVLYFGLMITKDGPKVLE--YNARFGDPETQVVLPRLKTDLLVIFEAIIDERL-- 316

Query: 222 LDSKISFDDNA 232
            D  I +DDN+
Sbjct: 317 CDIHIKWDDNS 327


>gi|170726876|ref|YP_001760902.1| GCN5-like N-acetyltransferase [Shewanella woodyi ATCC 51908]
 gi|169812223|gb|ACA86807.1| GCN5-related N-acetyltransferase [Shewanella woodyi ATCC 51908]
          Length = 896

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 16/143 (11%)

Query: 3   IHE-YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           I E +++K +L  Y +      V  +   A     T+  P+  +K Q             
Sbjct: 494 ILETHESKDILSAYGLKTIDTYVAETPEDAVKIANTIGYPV-AIKVQ--------SPDIH 544

Query: 62  LPADSKGGVRVESSLKSVISDIREI-LGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             +D  G +   SS   V    + I      I       G  V  + +  G    +E+ +
Sbjct: 545 HKSDVHGVMLNLSSQDEVCLAAKAIKTRVHDINPDAEIEGLIVQKMALTAG---AQEIRV 601

Query: 121 SLLVDRTSGMVAFIASTQGGMDI 143
           +++ D   G    +   +GG + 
Sbjct: 602 AVIDDPVFGPAILLG--EGGSEW 622


>gi|41353017|gb|AAS01130.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG   D+     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
           +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 111


>gi|41352969|gb|AAS01106.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETIFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +  +      + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGTKIYVRRGGPNY 111


>gi|124028019|ref|YP_001013339.1| pyruvate carboxylase subunit A [Hyperthermus butylicus DSM 5456]
 gi|123978713|gb|ABM80994.1| pyruvate carboxylase subunit A [Hyperthermus butylicus DSM 5456]
          Length = 491

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 21/124 (16%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++AK L  K  VP        S   A    + +  P+ ++K+    GGR           
Sbjct: 111 HRAKQLAEKVGVPTPPWCEARSAEEAVRCAERIGYPV-MLKASKAGGGR----------- 158

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV S+ + V    R  L S       G  G     VY+E      R + + +L D
Sbjct: 159 ---GMRVASNSEEVRRAYR--LVSLEARNGFGDAG----VVYIEKYVRNPRHIEVQILGD 209

Query: 126 RTSG 129
               
Sbjct: 210 GQGH 213


>gi|34592211|gb|AAQ76302.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGIEDLANYGEYSGGPTTAETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN-----IPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E         + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDTGVSIYVRRGGPNY 111


>gi|307710106|ref|ZP_07646550.1| phosphoribosylamine-glycine ligase [Streptococcus mitis SK564]
 gi|307619086|gb|EFN98218.1| phosphoribosylamine-glycine ligase [Streptococcus mitis SK564]
          Length = 419

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 95/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYCTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++     +E K+  +++      +G +V   G  +     +KL
Sbjct: 304 DFAQNIIDILEGKEPAITWTDKGVTLGVVVASNGYPLEYEKGVKL 348


>gi|241763201|ref|ZP_04761260.1| cyanophycin synthetase [Acidovorax delafieldii 2AN]
 gi|241367700|gb|EER61966.1| cyanophycin synthetase [Acidovorax delafieldii 2AN]
          Length = 859

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  + +V  A      +  P+ VVK Q   G +GKG    +   ++ 
Sbjct: 209 KRLLHAAGVPVPLGKPVDTVEEAWEVALKVGLPV-VVKPQ--DGNQGKGVTVNITDRAQ- 264

Query: 69  GVRVESSLKSVISDIRE 85
                  L+    +  E
Sbjct: 265 -------LEEAYRNAAE 274


>gi|297200429|ref|ZP_06917826.1| pimeloyl-CoA synthetase [Streptomyces sviceus ATCC 29083]
 gi|297147654|gb|EDY53584.2| pimeloyl-CoA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 741

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 39/235 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 528 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVV-----MKASGARIAHKTEL 582

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T         ++ V V    +   E+ +  
Sbjct: 583 GLVKIG----LTSASQVRDAYREL------TDIARYEDVSLDGVLVCQMVERGVEMVVGT 632

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G    +    GG+ +E +          + + P      E    +   L     
Sbjct: 633 AHDELFGPTVTVG--LGGVLVEVLRDTA------VRVPPFG---EEQARDMLGDLRGRAL 681

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                           ++   + +   +   D++ L+INPL+++  G+    LD+
Sbjct: 682 LDGVRGRPPADLDALVEVVLRVQRMAMELGDDLAELDINPLMVLPRGQGAVALDA 736


>gi|222111025|ref|YP_002553289.1| gcn5-like n-acetyltransferase [Acidovorax ebreus TPSY]
 gi|221730469|gb|ACM33289.1| GCN5-related N-acetyltransferase [Acidovorax ebreus TPSY]
          Length = 901

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 28/238 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV K ++  S H A      L  P+  +K                
Sbjct: 482 LTEMESKTLLAAFHIPVTKTLLARSSHEAMMIATQLGFPV-ALKID--------SPDIAH 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D  G      +  +      +++            G+R+N V V+  A     RE  +
Sbjct: 533 KSDVGGVALNVHNGSAARDAYTDMVQRV----ARVQPGARINGVTVQKMARGRRGRETCI 588

Query: 121 SLLVDRTSGMVAFIASTQGGM--DIEEVAKDYP---QKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G         G M   I + A + P   Q + + LID      S    +L +
Sbjct: 589 GLVSDEPFG-PVITFGAGGTMIELINDRAMELPPLNQFLARRLID-----RSRVAETLGE 642

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                         +   + +  C    +  ++INPLI+ + G +  +D++I   + A
Sbjct: 643 WRGATAVDLEGLEQVLLRVSEMVCALPQLREMDINPLIVDEQGAV-AVDARIVIHETA 699


>gi|34592189|gb|AAQ76291.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|21225188|ref|NP_630967.1| carboxylase [Streptomyces coelicolor A3(2)]
 gi|8218128|emb|CAB92560.1| putative carboxylase [Streptomyces coelicolor A3(2)]
          Length = 405

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A++L  ++ VP A  V + +   AE+A + +  P+ V+K   HAG               
Sbjct: 107 ARSLFARHGVPSAASVSVCTRQEAEAAAERIGYPV-VLKPASHAG--------------A 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GVR       + +  R         ++T   G+    V VE+  D   E+ +  +  R 
Sbjct: 152 IGVRRVDDRDQLTAAYRA-------AERTAGQGTESTSVLVEEFLD-GPEISVECVTYRG 203

Query: 128 SGMVAFI 134
           +  V  +
Sbjct: 204 TTTVVAV 210


>gi|304939615|emb|CBH30824.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK-----INIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +     +++ + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKAVDVKIYVRRGGPNY 111


>gi|302344175|ref|YP_003808704.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075]
 gi|301640788|gb|ADK86110.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075]
          Length = 709

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 25/224 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+QAK +L  Y +PV +    + V  A +A + L  P+ V      A  + K     +
Sbjct: 501 LDEHQAKQVLAAYGLPVCREEFCADVDQAVAAARRLGWPVAVKGC--LASVQHKTELGLV 558

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +      V  + + +                          + V +     REL   +
Sbjct: 559 HLNLADADAVAQACRKIRQAA------------------PAAGLLVAEMLPTGRELIAGV 600

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC-DMLELQG 181
              R       +    GG+  E +     +      +D L  + S    ++  D   +  
Sbjct: 601 T--RFPSFPPLVLCGLGGVLAEALRDTALRLAPLAAVDGLAMLESLRGRAILGDFRGMGA 658

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDS 224
                  DL   L +   +  +++ +++NP I+  +G+ R++D+
Sbjct: 659 VDLAAVADLLVRLGQVALNHPEIAEMDLNP-ILFVDGQPRIVDA 701


>gi|70730081|ref|YP_259820.1| acyl-CoA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68344380|gb|AAY91986.1| acyl-CoA synthetase, putative [Pseudomonas fluorescens Pf-5]
          Length = 699

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  LR + + +  G V+++   A SA   +  P  V+K+            +  
Sbjct: 484 LDEWQSKQALRGFGLSIPDG-VLTTPGQALSAAAGIGYP-LVLKAV---------SAELP 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELYLS 121
                G V +       +S    ++ + +        G     + +E   A  L EL + 
Sbjct: 533 HKTEAGAVALNLKDPEALSAALRLMRTRIAEH---APGLAFEQILLEPMAAAPLAELIVG 589

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 590 IKRENDFGLALVIGA--GGVLVELLKDSRSLLLPTTEGAIRQALLSLRSATLLQGFRGRP 647

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
                        +    C+    LLE  +NPL++   G +  +D+ I  
Sbjct: 648 EADLEALVAAIGAVADYACEHAGQLLELDVNPLLVGAQGTV-AVDALIRL 696


>gi|221070150|ref|ZP_03546255.1| CoA-binding domain protein [Comamonas testosteroni KF-1]
 gi|220715173|gb|EED70541.1| CoA-binding domain protein [Comamonas testosteroni KF-1]
          Length = 707

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 73/216 (33%), Gaps = 19/216 (8%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+++ VPV   V+ +    A +A + + GP+ V+K                     GGV 
Sbjct: 502 LKRFGVPVVPQVLATDAKQAVAAARDMNGPV-VLKI---------ASPDIAHKTEVGGVV 551

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +       +          +    +    +R++ V V        EL+  + VD  +   
Sbjct: 552 LNLQGDDAVEAA---FRRIMDAAASAMPKARLDGVIVSPMRKGGIELFTGVRVD--AQWG 606

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDL 190
             IA   GG+ IE +     + +     D    V+    A L                D 
Sbjct: 607 PVIALGLGGVWIEALQDVSLRLLPVTPADVEQMVSELRGAKLLQGFRGAPPVDVAKLADA 666

Query: 191 FPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDS 224
              +  A      +L  LE+NPL+     R+  LD+
Sbjct: 667 VARIGDAALALGATLDTLEVNPLLADG-ARIEALDA 701


>gi|307153024|ref|YP_003888408.1| carbamoyl-phosphate synthase large subunit [Cyanothece sp. PCC
           7822]
 gi|306983252|gb|ADN15133.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC
           7822]
          Length = 1082

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPV    + S++  A++    +     +++     GG G            G
Sbjct: 133 KEAMARIGVPVCPSGIASTLEEAKAIAVQIGSYPLIIRPAFTLGGTG------------G 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+        V++             Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 181 GISYNQEEFEVMA-------------QYGLDCSPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|171318044|ref|ZP_02907215.1| CoA-binding domain protein [Burkholderia ambifaria MEX-5]
 gi|171096778|gb|EDT41656.1| CoA-binding domain protein [Burkholderia ambifaria MEX-5]
          Length = 730

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 84/235 (35%), Gaps = 21/235 (8%)

Query: 3   IHEYQAKALLRKYNVPVA-KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E++A+  L +  VP +   ++  +   A  A + L      +K               
Sbjct: 501 VLEHEARQALVEAGVPASAPAILARTPQEALGAFRELGAVPVAMKVV---------SKDI 551

Query: 62  LPADSKGGVRVESSL-KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELY 119
           +     GGV++  +  + +     EILG+     Q       +  + V   A     E+ 
Sbjct: 552 IHKSDAGGVKLNLAAQEEIADAYAEILGNCRKAVQDPH----ITGMLVTPMAPKGGVEVI 607

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           + ++ D  +     +    GG+ +E +     + +     D    +      ++ D +  
Sbjct: 608 IGVVRD-PTYGPVMMFGL-GGVLVEVLKDVTFRSLPLTREDASQMLEDIRCKAILDGVRG 665

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                +     L  ++        ++  L++NP++    G LR+LD++I     A
Sbjct: 666 SPPVDKAALVQLMMSISALCTSFPEIEELDLNPVMAYATG-LRILDARIVLSTQA 719


>gi|34592185|gb|AAQ76289.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++A  D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVAYADTIADLAGIEDLANYGEYSGGPTTAETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN-----IPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E         + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDTGVRIYVRRGGPNY 111


>gi|121594379|ref|YP_986275.1| GCN5-like N-acetyltransferase [Acidovorax sp. JS42]
 gi|120606459|gb|ABM42199.1| GCN5-related N-acetyltransferase [Acidovorax sp. JS42]
          Length = 908

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 28/238 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV K ++  S H A      L  P+  +K                
Sbjct: 489 LTEMESKTLLAAFHIPVTKTLLARSSHEAMMIATQLGFPV-ALKID--------SPDIAH 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D  G      +  +      +++            G+R+N V V+  A     RE  +
Sbjct: 540 KSDVGGVALNVHNGSAARDAYTDMVQRV----ARVQPGARINGVTVQKMARGRRGRETCI 595

Query: 121 SLLVDRTSGMVAFIASTQGGM--DIEEVAKDYP---QKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G         G M   I + A + P   Q + + LID      S    +L +
Sbjct: 596 GLVSDEPFG-PVITFGAGGTMIELINDRAMELPPLNQFLARRLID-----RSRVAETLGE 649

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                         +   + +  C    +  ++INPLI+ + G +  +D++I   + A
Sbjct: 650 WRGATAVDLEGLEQVLLRVSEMVCALPQLREMDINPLIVDEQGAV-AVDARIVIHETA 706


>gi|320354363|ref|YP_004195702.1| CoA-binding domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122865|gb|ADW18411.1| CoA-binding domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 701

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 77/226 (34%), Gaps = 22/226 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +L+ Y   + +G + +S+  A    + +  P+ +         +       L   S 
Sbjct: 486 SKDILKAYGFRIMEGRLTTSLEEAVEIARFIGFPVAMKIVSPSIVHKSDLGGVRLNIGSS 545

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V     L              L   +  P  + V  VYVE  A+   E+ + +  D  
Sbjct: 546 QEVADAFDL------------MMLRINKHAPN-AIVEGVYVEKMAEKGLEVIIGMTRDPQ 592

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIF---KLLIDPLIGVTSEDVASLCDMLELQGQAR 184
            G    +    GG+ +E +               I  L    S ++  L     L+    
Sbjct: 593 FG-PMLMFGL-GGIFVEVMKDVTFHLAPITENEAIQMLKSTRSYEL--LEGKRGLKEVDI 648

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNG-RLRVLDSKISF 228
                    + +   D   +  L+INPLI+ + G    V D++++F
Sbjct: 649 SAIAVSLQRISQLTTDFPQIVELDINPLIVGEIGNEPVVADARMTF 694


>gi|91200872|emb|CAJ73927.1| strongly similar to acetyl-CoA synthetase (ADP-forming) gene
           [Candidatus Kuenenia stuttgartiensis]
          Length = 706

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 89/241 (36%), Gaps = 28/241 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AK ++  Y   + K ++ +S   A  A + +  P+ +  S      +       +
Sbjct: 484 LSEEDAKQVISTYGFTIPKSIIATSETGAVKAAEEMGYPVVMKISSPDILHKSDIGGVII 543

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              ++  VR+  S   ++   R          +    G     + V+      REL L +
Sbjct: 544 GVKNEQEVRICFS--DIMQKARR------HMPEADLKG-----IMVQQMITGGRELVLGV 590

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             +   G +       GG+ +E + KD   +I  + I+       E +  +     L+G 
Sbjct: 591 SHEPQFGHLIMFG--LGGIYVEAL-KDVTFRIAPVGINEA----REMIQEIRAFPLLKGV 643

Query: 183 ARIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFDDNALY 234
                 D+         L +   D  ++  ++INPL++   G     +D +I+ + +A  
Sbjct: 644 RGEKSVDIDAIVENILRLSQLVKDFPEIIEMDINPLVVFPKGDGAIAIDVRIAVNASAAK 703

Query: 235 R 235
           R
Sbjct: 704 R 704


>gi|34592213|gb|AAQ76303.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +  +  +      + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGTKIYVRRGGPNY 111


>gi|114320197|ref|YP_741880.1| GCN5-related N-acetyltransferase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226591|gb|ABI56390.1| GCN5-related N-acetyltransferase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 887

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 72/239 (30%), Gaps = 39/239 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++EYQA+ LL  Y +P       ++   A      + GP   +K                
Sbjct: 477 LNEYQAQQLLTAYEIPCVPSRRATTPEEAGREAAAMEGP-LALKI--------MSPDIVH 527

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            ++ +G      S ++V+ +   +       ++  P  +RV+   ++          L +
Sbjct: 528 KSEVRGVALDLESPEAVVQEAHAMEARL---RELYPD-ARVDGYLLQPMTPREGAFELCV 583

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS---EDVASLCDMLEL 179
            V         I    GG + + +A            D   G+          +     +
Sbjct: 584 AVMPGGRFGPVIRFGHGGTEAQVIA------------DVAYGLPPLNMHLAREMMSQTRI 631

Query: 180 QGQAR---------IDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISF 228
                                  + +   D +    LEINPL     G +  LDS++  
Sbjct: 632 YSMLASNRLRAADLDALALTLIKVSQMVIDFEAIESLEINPLWATAEG-VVALDSRVVI 689


>gi|257095426|ref|YP_003169067.1| cyanophycin synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047950|gb|ACV37138.1| cyanophycin synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 723

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL+   VPV +G ++ S   A  A + +  P+ V
Sbjct: 227 KTLLQSCGVPVPEGRLVESAEDAWEAAEDIGVPVVV 262


>gi|270308372|ref|YP_003330430.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides sp.
           VS]
 gi|270154264|gb|ACZ62102.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides sp.
           VS]
          Length = 1079

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +   PV     +++   A    + +  P+ +  +    G                
Sbjct: 130 KELLAEIGEPVPPSETVTTAGDALKIARKIGLPVVIRPAYTLGG---------------T 174

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +   V               QTG   S ++ + VE      +E+   ++  R  
Sbjct: 175 GGGFAHNWDEVEEVA-----------QTGLNASPIHQILVEKSVAGWKEIEYEVM--RDG 221

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
                        D   +       I  + +  L    S+ +      +   L ++G   
Sbjct: 222 ADNCITICNMENFDP--MGVHTGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCN 279

Query: 185 IDGG 188
           +   
Sbjct: 280 VQLS 283



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 12/102 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P A G  I+++  A S  +++  P+ V  S +  GGR      E+ +D+   
Sbjct: 674 RLLSEMGIPQAPGAGITTLDEALSIAESIGYPVVVRPSYVL-GGRAM----EIVSDASDL 728

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           +R  S+   + +    ++   L+       G  V    + DG
Sbjct: 729 IRYMSAAIELNTGHPILIDKYLV-------GKEVEVDAIADG 763


>gi|284051327|ref|ZP_06381537.1| CoA-binding domain protein [Arthrospira platensis str. Paraca]
          Length = 916

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 92/237 (38%), Gaps = 31/237 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K LL  Y +PV    + S+V  A +A + +  P+ +                  
Sbjct: 509 LTEFESKELLALYGIPVVDTRMASTVEEALAAAEAIGYPVAL----------KLLSETIT 558

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGV++  +    +    E + S+ +T++ GP       V V++   +   EL + 
Sbjct: 559 HKTDVGGVKLNLTSAEEVQAAYEAIASS-VTEKVGPE--HFQGVTVQEMLKLDGYELIIG 615

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVASLC 174
             +D   G    +  T G     ++ + +  +I  L + PL       +   ++   +L 
Sbjct: 616 SSLDPQFG-PVLLFGTGG-----QLVEVFKDRI--LALPPLNTTLARRMMEQTKIYKALL 667

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +             L         ++  +  ++INPL+  ++ RL  LD+++   D
Sbjct: 668 GVRGRPPVDMDALEQLMVRFSHIVVEQPWIKEIDINPLVASED-RLVALDARVVLHD 723


>gi|34592181|gb|AAQ76287.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGETKFYAETIFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +  +      + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGTKIYVRRGGPNY 111


>gi|148271933|ref|YP_001221494.1| phosphoribosylamine--glycine ligase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147829863|emb|CAN00787.1| phosphoribosylamine--glycine ligase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 416

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 15/107 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP  +     +V   E+A+     P YV+K+   A G+             
Sbjct: 106 AKRIMEEAGVPTGRAAQAGTVDEVEAALDEYGAP-YVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            GV V +     +   R  LG   +  +    G  V+   + DG D+
Sbjct: 152 -GVLVTADRTLALEHARHYLGQGTVLVEEFLAGQEVSLFLLSDGHDV 197


>gi|34592199|gb|AAQ76296.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGIEDLANYGEYSGGPTTAETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGPNY 111


>gi|62199506|gb|AAX76835.1| ATP citrate lyase beta subunit [Sulfurimonas denitrificans]
          Length = 111

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGIEDLANYGEYSGGPTTSETKFYAETILDLMTRDKDLKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A      K  ++ I + +R  G N 
Sbjct: 61  RDKVLIIGGAIANFTDVAKTFTGIIQAFELYADKMKQVGIKIYVRRGGPNY 111


>gi|113866801|ref|YP_725290.1| cyanophycin synthetase [Ralstonia eutropha H16]
 gi|113525577|emb|CAJ91922.1| cyanophycin synthetase [Ralstonia eutropha H16]
          Length = 877

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 224 KSLLESCGVPVPEGRMVDSPADAWDAAEDIGVPV-VVKP--YDGNHGRGVFTNLMTREEV 280

Query: 69  GVRVESSLKS 78
                 ++  
Sbjct: 281 ETAYGVAIDE 290


>gi|34592277|gb|AAQ76335.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 112

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPQ 60

Query: 321 VKGILINIFGGIMRCDVLV---KGILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I     +    KGI+ A ++       + + + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFKGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|225176025|ref|ZP_03730017.1| phosphoribosylamine/glycine ligase [Dethiobacter alkaliphilus AHT
           1]
 gi|225168613|gb|EEG77415.1| phosphoribosylamine/glycine ligase [Dethiobacter alkaliphilus AHT
           1]
          Length = 424

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A+    +S   A + +     P+ VVK+   A G+             
Sbjct: 106 AKQIMEKYNIPTAESRTFTSADKALAYLAEKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++++     ++ I    ++ K+ G  G+RV    +E+         +S+L    
Sbjct: 152 -GVVVATTVEEAEDAVKRI----MVDKEFGDAGARV---IIEEFLQGEE---VSVLAFTD 200

Query: 128 SGMVAFIASTQG 139
              V  + S+Q 
Sbjct: 201 GNTVVPMVSSQD 212


>gi|296122028|ref|YP_003629806.1| phosphoribosylamine/glycine ligase [Planctomyces limnophilus DSM
           3776]
 gi|296014368|gb|ADG67607.1| phosphoribosylamine/glycine ligase [Planctomyces limnophilus DSM
           3776]
          Length = 428

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++K  VP A   V S+   A S I        VVK+   A G+             
Sbjct: 106 AKEIMKKAGVPTADFRVFSNAAEAISYIDERTDERCVVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S       I+++L    + KQ G    ++    V +   I  E   S+L    
Sbjct: 153 -GVVVCQSKAEAREVIKKML----VQKQFGTASQQI----VVEDCLIGEE--ASILALVD 201

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 202 GSTIVPLESAQD 213


>gi|289583123|ref|YP_003481589.1| CoA-binding protein [Natrialba magadii ATCC 43099]
 gi|289532676|gb|ADD07027.1| CoA-binding domain protein [Natrialba magadii ATCC 43099]
          Length = 699

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 25/229 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++ ALL  Y +P   G ++     A    + + G + +                      
Sbjct: 485 ESMALLDAYGIPTPPGEIVDDPARAREVAEAIEGDVVM----------KIVSPDITHKSD 534

Query: 67  KGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GGV++  S   V     +++             G +V  +   +G     E  + +  D
Sbjct: 535 IGGVKIGVSDDEVYDAYEDVVARARNYQPDATILGVQVQAMLDLEGT---TETIVGVNRD 591

Query: 126 RTSGMVAFIASTQGGMDIEE----VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
              G +         ++I E          +   + ++D +          L      + 
Sbjct: 592 PQFGPLLLFGLGGIFVEILEDTSVRVAPIGENAAREMVDEI-----RAAPLLRGARGREP 646

Query: 182 QARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFD 229
                  +    L +   D    L L++NPL+    G ++ +D +++ D
Sbjct: 647 ADVDAIVETIQRLSQLVTDFPAILELDVNPLVAGPEG-VQAIDLRLTVD 694


>gi|254385790|ref|ZP_05001110.1| pimeloyl-CoA synthetase [Streptomyces sp. Mg1]
 gi|194344655|gb|EDX25621.1| pimeloyl-CoA synthetase [Streptomyces sp. Mg1]
          Length = 717

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 80/235 (34%), Gaps = 39/235 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+ +  S    G + +    ++
Sbjct: 504 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVVMKASGPQLGHKTELGLVKI 563

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       S   +    RE+      T         ++ + V    +   E+ + +
Sbjct: 564 GLT---------SASQIRDAYREL------TDIARYENVPLDGILVCQMVERGVEMVVGV 608

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G    +    GG+ +E +          + + P      +   ++   L     
Sbjct: 609 TRDDLFGPTVTVG--LGGVLVEVLHDAA------VRVPPFG---EDQARAMLTELRGHAL 657

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                           ++   + +   +   SL E  INPL+++  G+    LD+
Sbjct: 658 LEGVRGAPPADVDALVEVVLRVQRMALELGDSLSELDINPLMVLPRGQGAVALDA 712


>gi|34592183|gb|AAQ76288.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADLAGIEDLANYGEYSGGPTTAETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN-----IPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E         + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDTGVRIYVRRGGPNY 111


>gi|303255503|ref|ZP_07341562.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS455]
 gi|303259096|ref|ZP_07345074.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP-BS293]
 gi|303260854|ref|ZP_07346803.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263181|ref|ZP_07349104.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS397]
 gi|303266703|ref|ZP_07352586.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS457]
 gi|303268960|ref|ZP_07354744.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS458]
 gi|301801019|emb|CBW33685.1| phosphoribosylamine-glycine ligase [Streptococcus pneumoniae
           INV200]
 gi|302597523|gb|EFL64610.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS455]
 gi|302637691|gb|EFL68177.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639514|gb|EFL69971.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP-BS293]
 gi|302641498|gb|EFL71861.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS458]
 gi|302643781|gb|EFL74045.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS457]
 gi|302646954|gb|EFL77178.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           BS397]
          Length = 420

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVADTVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|327438543|dbj|BAK14908.1| phosphoribosylamine-glycine ligase [Solibacillus silvestris
           StLB046]
          Length = 416

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 35/171 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A     +    A + IK    P+ V+K+   A G+             
Sbjct: 106 AKEIMNKYNIPTAAHETFTEADKAVAYIKEQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  + +++G+          G   + V VE+  D     ++S +    
Sbjct: 152 -GVIVAMTEQEAIEAVEDMIGNQRF-------GDSSSRVVVEEFLDGEEFSFMSFVHKGQ 203

Query: 128 SGMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
                 IA               GGM          + I K+  D ++  T
Sbjct: 204 IY-PMVIAQDHKRAYDGDKGPNTGGMGAYSPVPQISEDIVKVAYDTIVEPT 253


>gi|160937903|ref|ZP_02085261.1| hypothetical protein CLOBOL_02797 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439129|gb|EDP16883.1| hypothetical protein CLOBOL_02797 [Clostridium bolteae ATCC
           BAA-613]
          Length = 1072

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 62/201 (30%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L + N+P   G  + +   A+ A   L  P+ V  S +  G   +    +        
Sbjct: 678 AILEQCNIPRPAGHTVFTAEEAKEAAHKLGYPVLVRPSYVLGGQGMQIAISD-------- 729

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 +   I  I +I     I       G  +    + DG DI   L   ++      
Sbjct: 730 ----EDIDEFIGIINQIAQEHPILVDKYIMGKEIEVDAICDGTDI---LIPGIMQHIERT 782

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            +        G  I          I +  ID ++  T      L   L ++G   I    
Sbjct: 783 GI------HSGDSISVYPAQD---ITQHNIDTIVDYTE----KLARALHVKGMINIQF-- 827

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                       D+ ++E+NP
Sbjct: 828 -------IVDGDDVYIIEVNP 841


>gi|134101562|ref|YP_001107223.1| 6-carboxyhexanoate-CoA ligase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133914185|emb|CAM04298.1| 6-carboxyhexanoate-CoA ligase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 709

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 73/241 (30%), Gaps = 29/241 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  +  LL    VP    V + +    +        P+ VVK+               
Sbjct: 489 LDEQVSAELLAGVGVPALPSVALKTASIDDEVTLPFGYPV-VVKA--------LSDQLAH 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D  G V   +   ++ + +R+I             G  V+ V V+  AD      L  
Sbjct: 540 KTDVGGVVLGVADADALRAAVRKI-----AVDVAERAGITVDRVLVQPMADKGVGEVLVG 594

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVA------KDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
                      + ST GG+  E             +   + +ID + G+     A L   
Sbjct: 595 YRRSPDVGPVVVLST-GGVQAELYDDSAIRLAPVDRATAQEMIDEVTGL-----AVLKGH 648

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI-SFDDNALY 234
                       D    L     +   +   E NP+++   G +  LD+ +   DD    
Sbjct: 649 RGTPAGDVPALADAVVALSHLAVEHPSIVEAEANPVLVRTEG-VVALDALVRRIDDEKSG 707

Query: 235 R 235
           R
Sbjct: 708 R 708


>gi|319761498|ref|YP_004125435.1| cyanophycin synthetase [Alicycliphilus denitrificans BC]
 gi|330823367|ref|YP_004386670.1| cyanophycin synthetase [Alicycliphilus denitrificans K601]
 gi|317116059|gb|ADU98547.1| cyanophycin synthetase [Alicycliphilus denitrificans BC]
 gi|329308739|gb|AEB83154.1| cyanophycin synthetase [Alicycliphilus denitrificans K601]
          Length = 726

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G ++ +   A    + +  P+ V  S          R   L    + 
Sbjct: 225 KRLLAACGVPVPEGRIVKNAEEAWEVAQEIGFPVTVKPS-----DGNHARGVTLELSREA 279

Query: 69  GVRVESSLKS 78
            ++   +L  
Sbjct: 280 DIKAAFALAE 289


>gi|297193774|ref|ZP_06911172.1| pimeloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151940|gb|EFH31441.1| pimeloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 743

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 33/232 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  A+  A   +  P+ +  S      + +    ++
Sbjct: 530 LSEHAAKQLLRAYGIRVPREQLVTSAAASVRAAALVGYPVVMKASAPQLAHKTELGLVKI 589

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       S   V    RE+      T      G  ++ V V    +   E+ + +
Sbjct: 590 GLT---------SASQVRDSYREL------TDIARYEGVDLDGVLVCQMVERGVEMVVGV 634

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV------ASLCDM 176
             D   G    +    GG+ +E +          + + P     + D+       +L + 
Sbjct: 635 AQDDLFGPTVTVG--LGGVLVEVLHDTA------VRVPPFGEDQARDMLGELRGRALLEG 686

Query: 177 L-ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
           +            ++   + +   +    L E  +NPL+++  G+    LD+
Sbjct: 687 VRGGPPVDVDALVEVVLRVQRMALELGGQLAELDVNPLMVLPRGQGAVALDA 738


>gi|145588727|ref|YP_001155324.1| GCN5-related N-acetyltransferase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047133|gb|ABP33760.1| GCN5-related N-acetyltransferase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 895

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 30/235 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KALL  +++P+ + ++  S + A      +  P+ V+K             K  
Sbjct: 480 LTEMESKALLSAFHIPITQTILAKSANEAIMIANQIGYPV-VLKIDSP-----DVSHKSD 533

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
                  V    S++ V + + +       T       + +N + V+        RE+Y+
Sbjct: 534 VNGVALDVMNAVSVRDVYAHMTQ-------TVTHLVPDAIINGITVQKMVRNKRGREIYI 586

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK------IFKLLIDPLIGVTSEDVASLC 174
            L+ +   G    IA   GG  IE +     +       + + LI       S    +L 
Sbjct: 587 GLVNEEPFG--PVIAFGAGGTMIELLNDQSMELPPLNQYLAQQLIS-----RSRIAQTLK 639

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +              +   + +  C+   +  ++INP+I+ + G +  +D++I  
Sbjct: 640 EWRGAPAVNEEAIEHILLRVSEMACELPQLVEMDINPIIVDEFGAV-AVDARIVI 693


>gi|313498705|gb|ADR60071.1| PauA [Pseudomonas putida BIRD-1]
          Length = 706

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 25/229 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E++AK+LLR+  +P     +++      +A + L  P  V+K                
Sbjct: 484 ISEHEAKSLLRRAGIPFPAEQLVAVDQDPAAAARRLGFP-LVMKI---------SSADLP 533

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV +  +   V    + +       +   P    +  V +        E  + +
Sbjct: 534 HKTEVGGVCLRLT--DVQQVRKSMAEMLETVRGKAPDAH-IEGVTLAPMISGGVETIVGV 590

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQG 181
             D  +     +    GG+ +E +     +       D    +    ++     +  ++G
Sbjct: 591 FSD-PTMGPVVMFGL-GGVFVEVLKDVTFRVA---PFDQHEALRMIREIRGFAMLEGVRG 645

Query: 182 QA---RIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
            A         L   L +  A      S +++NP+++M  G+ +  LD+
Sbjct: 646 AAPADIDALARLLVQLSRFAAAHAGQFSSIDLNPVVVMPRGQGVLALDA 694


>gi|296241888|ref|YP_003649375.1| acetyl-CoA synthetase subunit beta [Thermosphaera aggregans DSM
           11486]
 gi|296094472|gb|ADG90423.1| acetyl-CoA synthetase (ADP-forming) beta subunit ;branched-chain
           acyl-CoA synthetase (ADP-forming) beta subunit
           [Thermosphaera aggregans DSM 11486]
          Length = 232

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 82/230 (35%), Gaps = 20/230 (8%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E++A  +++ Y +     VV+ +   A+S    +  P+ +                 
Sbjct: 17  KLLEHEAFQVIKYYGINSPDVVVVRNGEEAKSLADKIGYPVAL----------KIVSPDI 66

Query: 62  LPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 GGV++   S + V   + E+L     T +T    +R+  V +   A    E+ +
Sbjct: 67  SHKSDVGGVKLNLKSPEEVGRAVDEML----KTVKTKAPNARLVGVLMYRMAPQGLEVIV 122

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
             + D   G V       GG+ +E +     +     + D L  +       + +     
Sbjct: 123 GGVRDGIFGPVVMFG--LGGIFVEVLKDVSFRVSPIRMEDALEMLREIKSYKVLEGYRGQ 180

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
               +    ++     K   +  ++  +++NP++   +     +D++I  
Sbjct: 181 PPVNKDAIAEIIVKTSKLLEENPEIESIDLNPVMAYPD-SAMAVDARIIL 229


>gi|225857920|ref|YP_002739430.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           70585]
 gi|225721179|gb|ACO17033.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           70585]
 gi|332204075|gb|EGJ18140.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA47901]
          Length = 420

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|89896671|ref|YP_520158.1| hypothetical protein DSY3925 [Desulfitobacterium hafniense Y51]
 gi|89336119|dbj|BAE85714.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 419

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 23/103 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V S    A+  IK L  P+ V+K+   A G+             
Sbjct: 106 AKEIMEAAGVPTAQSRVFSEPEQAKEYIKQLGAPI-VLKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V   L + ++ + E++  +L     G +G     + VE+
Sbjct: 152 -GVIVAMDLDTALTAVDELMDGSL-----GESGKL---LLVEE 185


>gi|85539409|emb|CAJ57320.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539425|emb|CAJ57328.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYAAKMKDVGTRIYVRRGGPNY 112


>gi|298244195|ref|ZP_06968001.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Ktedonobacter racemifer DSM 44963]
 gi|297551676|gb|EFH85541.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Ktedonobacter racemifer DSM 44963]
          Length = 714

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 19/219 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ LL++  +PV  G +++++  A  A + L  P   +K Q           +       
Sbjct: 504 ARVLLQQAGIPVVPGRLVTTLDEALQAAQELGFP-LALKVQ---------SAEIAHKSDV 553

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV +  + +  +    + +   + +         +    +        EL + ++ D  
Sbjct: 554 GGVALNINSEEALRQSYDTIHERVRSALPRAE---LEGFLISPMRSAGLELLVGIIRDPL 610

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQARID 186
            G V  +    GG+  E +     + +     +    +      A L             
Sbjct: 611 WGPVLSLG--LGGIWTEALQDTSVRVLPVNQGEIHSMLNELRGAALLRGSRGHHAVNLDA 668

Query: 187 GGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLD 223
              +  ++          L  LEINPL++     +  LD
Sbjct: 669 LSQVIYHISLLAQGLGPELAALEINPLLVDAT-TIEALD 706


>gi|124028190|ref|YP_001013510.1| hypothetical protein Hbut_1336 [Hyperthermus butylicus DSM 5456]
 gi|123978884|gb|ABM81165.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
          Length = 477

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 64/187 (34%), Gaps = 29/187 (15%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IGCMVNGAGLAMATMDIIKLYG 290
           A ++   I       EE    ++A   N      DG+ I  + NG G  +   D +   G
Sbjct: 265 AAFKQSGIL-FAKSIEEAFDWVKALTWN---PLPDGDRIVIITNGGGAGVQASDTLADNG 320

Query: 291 G---AP------------------ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
                P                   N +D+ G A  +    A     +D  V  I++   
Sbjct: 321 FLLQKPPQSLVDEIRKFVPPFASLNNPIDLTGMAPTEWYYKAVYAALNDPGVDSIVVLYC 380

Query: 330 -GGIMRCDVLVKGILSAVKE-VKINIPL-VMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
              +     + + I++AVK+   +  P+ V  + G     G + + E+ +      +   
Sbjct: 381 HTAMTHPVEVAEAIINAVKDAGGLKKPMTVALIGGIEAYEGIKKLTEAKIPAYPTPERAA 440

Query: 387 AAQKIVH 393
           AA   VH
Sbjct: 441 AAIATVH 447


>gi|325695257|gb|EGD37157.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK150]
          Length = 420

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKSYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|315127653|ref|YP_004069656.1| acyl-CoA synthetase, NAD(P)-binding protein, ATP-binding protein
           [Pseudoalteromonas sp. SM9913]
 gi|315016167|gb|ADT69505.1| acyl-CoA synthetase, NAD(P)-binding protein, ATP-binding protein
           [Pseudoalteromonas sp. SM9913]
          Length = 888

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 29/251 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA  +L  Y +   +  V  +   A+     L  P+ +         +         ++
Sbjct: 492 HQASQILSSYGIDCIQTEVAYTPTEAKEQAIELGFPVAL---------KLMSPSIPSKSE 542

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYLSLLV 124
             G V   +  + V      +L     T       G  +    +   A    EL +++  
Sbjct: 543 VGGVVLNLNDAQEVEQTAFAMLLRIKNTYPDAIIDGFSLQK--MAPRAG-ANELRIAIKT 599

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +   G V  +     G++  + A   P             +    +A+  D   L+ +  
Sbjct: 600 EPNFGPVILLGEAGTGLEYAQAAVALPPLNMN--------LAKYLIAAAHDKGVLKDRIL 651

Query: 185 IDGGD------LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            +  D      L   + +   D+ D++ LE+NP I+  NG+  VLD+ ++ +   +  H 
Sbjct: 652 PEKVDKYRLCALLTRISQLVVDQPDITSLELNP-ILASNGQFLVLDATMNLNQYQVQAHR 710

Query: 238 DIQELRDVSEE 248
               +R    E
Sbjct: 711 KRLSIRPYPIE 721


>gi|256809979|ref|YP_003127348.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Methanocaldococcus fervens AG86]
 gi|256793179|gb|ACV23848.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Methanocaldococcus fervens AG86]
          Length = 481

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 38/188 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K     N PV K   ++SV  A    + +  P+ V  +    G            
Sbjct: 126 RELFAKAMAEINEPVTKCKAVNSVDEAVEFAEEIGYPVIVRPAFTLGG------------ 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +I    + L  ++           ++ V +++     +E  L ++ 
Sbjct: 174 -TGGGI--AHNKEELIDIASKGLKYSI-----------IHQVLIDESVLGWKEFELEVMR 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQ 180
           DR    +       G  +I+ +     + I    I    D            +   L ++
Sbjct: 220 DRKDTCIIV----CGMENIDPMGIHTGESIVVSPIQTLPDEFYQKLRNAAIKIIRHLGIE 275

Query: 181 GQARIDGG 188
           G   I   
Sbjct: 276 GGCNIQFA 283


>gi|168492341|ref|ZP_02716484.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC0288-04]
 gi|183573456|gb|EDT93984.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC0288-04]
          Length = 420

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|41352971|gb|AAS01107.1| AclB [uncultured prokaryote]
          Length = 112

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPR 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|15899996|ref|NP_344600.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           TIGR4]
 gi|111658400|ref|ZP_01409084.1| hypothetical protein SpneT_02000427 [Streptococcus pneumoniae
           TIGR4]
 gi|20139619|sp|Q97T98|PUR2_STRPN RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|14971515|gb|AAK74240.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           TIGR4]
          Length = 420

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|283856228|ref|YP_162034.2| phosphoribosylamine/glycine ligase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|283775223|gb|AAV88923.2| phosphoribosylamine/glycine ligase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 403

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 24/123 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +YN+P A+     S   A++A+     P+ V+K+   AGG+              
Sbjct: 93  KDLCARYNIPTARYQRCRSAEEAKAALDNFSTPV-VIKADGLAGGK-------------- 137

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  S       I+++          G  G     + VE+        + ++  D  +
Sbjct: 138 GVIIAESRLEAEQAIQDM-----TAGAFGKAGL---EIVVEEFMQGEEASFFAI-SDGET 188

Query: 129 GMV 131
              
Sbjct: 189 VRP 191


>gi|41353037|gb|AAS01140.1| AclB [uncultured prokaryote]
          Length = 112

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPQ 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|260753164|ref|YP_003226057.1| phosphoribosylamine/glycine ligase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|59803039|sp|Q9FDL5|PUR2_ZYMMO RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|258552527|gb|ACV75473.1| phosphoribosylamine/glycine ligase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 417

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 24/123 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +YN+P A+     S   A++A+     P+ V+K+   AGG+              
Sbjct: 107 KDLCARYNIPTARYQRCRSAEEAKAALDNFSTPV-VIKADGLAGGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  S       I+++          G  G     + VE+        + ++  D  +
Sbjct: 152 GVIIAESRLEAEQAIQDM-----TAGAFGKAGL---EIVVEEFMQGEEASFFAI-SDGET 202

Query: 129 GMV 131
              
Sbjct: 203 VRP 205


>gi|307707955|ref|ZP_07644430.1| phosphoribosylamine--glycine ligase [Streptococcus mitis NCTC
           12261]
 gi|307616020|gb|EFN95218.1| phosphoribosylamine--glycine ligase [Streptococcus mitis NCTC
           12261]
          Length = 420

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|149193799|ref|ZP_01870897.1| phosphoribosylamine--glycine ligase [Caminibacter mediatlanticus
           TB-2]
 gi|149135752|gb|EDM24230.1| phosphoribosylamine--glycine ligase [Caminibacter mediatlanticus
           TB-2]
          Length = 421

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 21/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+KYN+P AK +  S+   A   I  +     VVK+     G+              
Sbjct: 103 KNFLKKYNIPTAKYIETSNKDEAFEFIDKMEKTPIVVKADGLCAGK-------------- 148

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S       + E+L      K  G  G     V VE+  D
Sbjct: 149 GVIIAESRDEAKKTVEEML----SGKAFGEAGK---KVIVEEFLD 186


>gi|72161715|ref|YP_289372.1| hypothetical protein Tfu_1311 [Thermobifida fusca YX]
 gi|71915447|gb|AAZ55349.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 886

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 81/227 (35%), Gaps = 29/227 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q   +L  Y V VA      +   +  A + L  P+  +K+ + AG   K R   L  D 
Sbjct: 668 QTMEVLGCYGVTVAPWQWTHTPEESVRAWRELNSPV-ALKADV-AGVVHKKRAGALRLDL 725

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G        + V +   E++            GSR+  V V+  A    E+ L L    
Sbjct: 726 SGA-------EQVRNAHAELISRF---------GSRLRGVLVQAMAPRGFEVLLGL---- 765

Query: 127 TSGMVAF---IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQ 182
            +    F   +    GG   E +     +      +D    V S   + +L +  E +  
Sbjct: 766 -AQQPVFGPVLVCGLGGTYTEALRTRAARLAPLTDVDAAELVRSVPALRTLGEGDEEKAV 824

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                 D+   L +   D   +S L++NP++   +     +D++I  
Sbjct: 825 DLDALRDMALRLSQLAVDLPQVSELDMNPVLATPS-SAMCVDARIRV 870


>gi|300311485|ref|YP_003775577.1| cyanophycin synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074270|gb|ADJ63669.1| cyanophycin synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 857

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G V+ +V  A  A + +   + V+K     G +GKG    +    +
Sbjct: 209 KMLLHAAGVPVPNGRVVETVEDALKAAEEIGSAV-VIKP--LDGNQGKGVAVNISTPEQ 264


>gi|149023483|ref|ZP_01836072.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP23-BS72]
 gi|149025556|ref|ZP_01836485.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP23-BS72]
 gi|147929358|gb|EDK80356.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP23-BS72]
 gi|147929806|gb|EDK80796.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP23-BS72]
          Length = 420

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|34592247|gb|AAQ76320.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E       + + +  R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIHARRGGPNY 111


>gi|158426281|ref|YP_001527573.1| GCN5-related N-acetyltransferase [Azorhizobium caulinodans ORS 571]
 gi|158333170|dbj|BAF90655.1| GCN5-related N-acetyltransferase [Azorhizobium caulinodans ORS 571]
          Length = 898

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 84/241 (34%), Gaps = 32/241 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA+L  Y++PV +    +S   A        GP+ +                 +
Sbjct: 487 LTEVEAKAVLAAYDIPVVETRTAASPAEAADLAAAFGGPVAL----------KILSDDII 536

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                GGVR++  +   V      +L +      Q    G  V    V        EL  
Sbjct: 537 HKSEAGGVRLDLRTPAQVEEAAELMLAAVRERMPQARLEGFTVQR-MV--RRQRAVELIA 593

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASL 173
            +  D T G V      +GG  +E +A         + + PL G  + ++         L
Sbjct: 594 GIANDETFGPVVLFG--EGGTAVEVIADRA------VALPPLNGRLAREMMERTRIYRRL 645

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
               +               + +   D   +  L+INPL++ +NG +  LD++I    +A
Sbjct: 646 VGYRDRPAADLDAVATTLVKISELMGDLPQIGELDINPLLVDENG-VIALDARIVVHPSA 704

Query: 233 L 233
            
Sbjct: 705 S 705


>gi|152986679|ref|YP_001351030.1| hypothetical protein PSPA7_5711 [Pseudomonas aeruginosa PA7]
 gi|150961837|gb|ABR83862.1| hypothetical protein PSPA7_5711 [Pseudomonas aeruginosa PA7]
          Length = 696

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  L+ + +P+ +G V+S+   A  A   L  P  V+K+   A           
Sbjct: 481 LDEWQSKQALKPFGLPLPQG-VLSTPGQAREAALDLGFP-LVLKAVSAAL---------P 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                GGV +    ++ +     +        +  P       V +E  A   L EL + 
Sbjct: 530 HKTEAGGVALGLRNEAALEAA--LFDMRESLARHAPQ-LVFERVLLERMAGAPLAELIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 587 VKREEGFGLALVIGA--GGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRP 644

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
                        + +  C+    LLE  +NPL+    G L  +D+ I  
Sbjct: 645 AVCMESLVAAIRAVAEFACEHAERLLELDVNPLLADAEGAL-AVDALIRL 693


>gi|328884292|emb|CCA57531.1| acetyl-CoA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 740

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 79/235 (33%), Gaps = 39/235 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 527 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVV-----MKASGAQLAHKTEL 581

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   V    RE+      T         ++ V V        E+ + +
Sbjct: 582 GLVKVG----LTSASQVRDAYREL------TDIARFESIDLDGVLVCQMVGRGVEMVVGV 631

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G    +    GG+ +E +          + + P       +  S+   L     
Sbjct: 632 ARDDLFGPTVTVG--LGGVLVEVLGDTA------VRVPPFG---EREARSMLAELRGRAL 680

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGR-LRVLDS 224
                           ++   + +   + D  L E  INPL+++  G+    LD+
Sbjct: 681 LDGVRGAPPADVDALVEVVLRVQRMALELDGDLAELDINPLMVLPRGQGAVALDA 735


>gi|157382730|gb|ABV48803.1| ATP citrate lyase beta subunit [enrichment culture clone RaclB7]
 gi|157382798|gb|ABV48836.1| ATP citrate lyase beta subunit [Caminibacter sp. TB-1]
 gi|304939613|emb|CBH30823.1| ATP citrate lyase [uncultured bacterium]
 gi|304939661|emb|CBH30847.1| ATP citrate lyase [uncultured bacterium]
          Length = 112

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDEK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|182412794|ref|YP_001817860.1| pyruvate carboxylase [Opitutus terrae PB90-1]
 gi|177840008|gb|ACB74260.1| pyruvate carboxylase [Opitutus terrae PB90-1]
          Length = 1165

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 76/211 (36%), Gaps = 35/211 (16%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+AL ++  VPV  G    ++    A    K++  P  ++K+    GGRG  R    PAD
Sbjct: 115 ARALAQRIGVPVLPGTEEPLTDRDEALRVAKSIGFP-LIIKAAFGGGGRGM-RIVHKPAD 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G       L    ++     G+                V++E      + + + +L D
Sbjct: 173 MAGL------LDEAQAEAGRAFGNP--------------AVFLEKYIPRAKHIEVQVLGD 212

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQAR 184
           R       I   +    ++   +   +      + P  G+    VA LC+   +L    R
Sbjct: 213 RHGN---VIHLHERDCSVQRRHQKVVE------VAPSYGLPETIVAELCEAAAKLARSIR 263

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            D       LY      +   +E+NP I ++
Sbjct: 264 YDNAGTIEFLYDL-DRHEWFFIEMNPRIQVE 293


>gi|75910860|ref|YP_325156.1| GCN5-like N-acetyltransferase [Anabaena variabilis ATCC 29413]
 gi|75704585|gb|ABA24261.1| GCN5-related N-acetyltransferase [Anabaena variabilis ATCC 29413]
          Length = 918

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 88/240 (36%), Gaps = 30/240 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  Y +P+    V  +   A    +++  P+ VVK   H            
Sbjct: 510 LTEDESKQILAAYGIPIVATCVAKTEDEAIKCAESIGYPV-VVKLYSHT---------IT 559

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGV++       +     ++ +++  K        V    V+    +   EL + 
Sbjct: 560 HKTDVGGVQLNLPDADAVRRAYRMIAASVEQKVGSEHFLGVT---VQPMVKMDGYELIIG 616

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
             +D   G V    +  GG  +E       + I    ++  +     +   +   L  ++
Sbjct: 617 SSLDPQFGPVLLFGA--GGQLVEVFQD---RAIALPPLNSTLARRMMEHTKIYKALKGVR 671

Query: 181 GQARIDG---GDLFPNLYKAFCDKD-MSLLEINPLI---IMKNGR---LRVLDSKISFDD 230
           G+  +D      L     +   ++  +  ++INPL+   + +NG    L  LD+++   +
Sbjct: 672 GRQSVDMEGLEQLMVAFSRLVVEQRWIKEIDINPLLASPVQENGENSSLIALDARVVLHE 731


>gi|225016363|ref|ZP_03705555.1| hypothetical protein CLOSTMETH_00266 [Clostridium methylpentosum
           DSM 5476]
 gi|224950906|gb|EEG32115.1| hypothetical protein CLOSTMETH_00266 [Clostridium methylpentosum
           DSM 5476]
          Length = 426

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V      A + IK       VVK+   A G+             
Sbjct: 106 SKELMKKYGIPTAGYEVFDKAEDAVAYIKEQNSYPTVVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +    +     +  I+   +     G +G   N + VE+  
Sbjct: 153 -GVLICEDFEQAKDAVHSIMEDKIF----GASG---NKLVVEEFL 189


>gi|149923959|ref|ZP_01912345.1| acetyl-CoA carboxylase, biotin carboxylase [Plesiocystis pacifica
           SIR-1]
 gi|149815191|gb|EDM74740.1| acetyl-CoA carboxylase, biotin carboxylase [Plesiocystis pacifica
           SIR-1]
          Length = 457

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 16/75 (21%)

Query: 7   QAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
            A+  ++K  VPV +G  V+ S   A +A + +  P+ ++K+    GGR           
Sbjct: 120 MARETMKKAGVPVLEGTTVLESGEEARAAAERIGLPV-ILKASAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVI 80
              G+++   L  V 
Sbjct: 168 ---GMKIVWDLDEVA 179


>gi|197303253|ref|ZP_03168294.1| hypothetical protein RUMLAC_01976 [Ruminococcus lactaris ATCC
           29176]
 gi|197297679|gb|EDY32238.1| hypothetical protein RUMLAC_01976 [Ruminococcus lactaris ATCC
           29176]
          Length = 1067

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 57/208 (27%), Gaps = 50/208 (24%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEECQIPRPTGGTVFTAEEAKEVANRLGYPVLVRPSYVL-GGQGMQIAINDN------ 725

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 +   I  I  I     I       G  +    V DG DIL              
Sbjct: 726 -----DIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGDDILI------------- 767

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQGQ 182
               +        IE         I    + P   +T        E    L   L + G 
Sbjct: 768 -PGIM------EHIERAGIHSGDSI---SVYPAQSLTDGAKAKIAEYTRRLAKSLHVIGM 817

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I              ++D+ ++E+NP
Sbjct: 818 INIQFI--------VCGEEDVYVIEVNP 837


>gi|41353013|gb|AAS01128.1| AclB [uncultured prokaryote]
          Length = 112

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|315221683|ref|ZP_07863600.1| phosphoribosylamine--glycine ligase [Streptococcus anginosus F0211]
 gi|315189259|gb|EFU22957.1| phosphoribosylamine--glycine ligase [Streptococcus anginosus F0211]
          Length = 421

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A+    S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMKKYGVPTARYETFSDFEKAKTYIEKEGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +    E+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEEAVEAAHEML----LDNKFGDSGARV---VIEEFL 189


>gi|156101812|ref|XP_001616599.1| acetyl CoA synthetase [Plasmodium vivax SaI-1]
 gi|148805473|gb|EDL46872.1| acetyl CoA synthetase, putative [Plasmodium vivax]
          Length = 994

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 89/275 (32%), Gaps = 29/275 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E+ +K +L+ Y +      +  ++   E     +  P   +K                
Sbjct: 558 LNEFDSKRILQSYGIATVPTEIFHTLEEIEQNAARITFPC-AMKIH--------SDTITH 608

Query: 63  PADSKGGVRVESSLKSVISDIREI-LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             D  G +   +S + +    + I  G      ++   G  +    +     I  EL L 
Sbjct: 609 KKDIGGVILNINSREELTQAYKSIQEGVKKYNLESEFKGVTIQR-MINTNDGI--ELILG 665

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
              D   G V    S   G    E+ KD    I  L       +  E       + +   
Sbjct: 666 YYFDANFGPVLLFGS---GGSYVEIFKDNVLLIPPLSYSYTHHMMKETKIYQALLGKSSR 722

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLL------EINPLIIMKNGRLRVLDSKISFDDNALYR 235
             + D   L   +   F D  + LL      +INPL +  +  +  LD++ +     L R
Sbjct: 723 FKQGDIPKLISKIIN-FSDLVLDLLPYINECDINPLFVSGS-EILALDARFT-----LRR 775

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
            +  +       +      A+++ +  +  DG  G
Sbjct: 776 GVTPESFHSARRDPLYSAFARKYPVEMVFFDGVTG 810


>gi|125974372|ref|YP_001038282.1| carbamoyl-phosphate synthase large subunit [Clostridium
           thermocellum ATCC 27405]
 gi|256005549|ref|ZP_05430509.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum DSM 2360]
 gi|281418918|ref|ZP_06249936.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum JW20]
 gi|125714597|gb|ABN53089.1| carbamoyl-phosphate synthase large subunit [Clostridium
           thermocellum ATCC 27405]
 gi|255990457|gb|EEU00579.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum DSM 2360]
 gi|281407375|gb|EFB37635.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum JW20]
 gi|316941530|gb|ADU75564.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum DSM 1313]
          Length = 1067

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 12/104 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P+ +G    S   A++  + +  P+ V  S +  G   +  + +         
Sbjct: 677 LLEELGIPLPEGDTAFSYEEAKAIAQRIGYPVLVRPSYVLGGRAMEVVYND--------- 727

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
               +LK  +     +  +  +       G  V    + DG D+
Sbjct: 728 ---ETLKEYMQLAVGLATNHPVLIDKYIEGKEVEVDGICDGEDV 768


>gi|293606699|ref|ZP_06689053.1| acetyl-CoA synthetase [Achromobacter piechaudii ATCC 43553]
 gi|292814912|gb|EFF74039.1| acetyl-CoA synthetase [Achromobacter piechaudii ATCC 43553]
          Length = 708

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 15/124 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E QAKAL  ++ +P  + + + S   A SA  TL  P  V+K               
Sbjct: 489 SLDEAQAKALFARFGIPSVREMTVRSEEEAISAATTLG-PRVVLK---------LLSRDI 538

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV V  + + + + + ++            TG       V++      EL + 
Sbjct: 539 THKSDVGGVAVNVAPEDIAARLEQM-----RADVQRHTGHAPQAFLVQEMVTGAAELIVG 593

Query: 122 LLVD 125
           +  D
Sbjct: 594 VHHD 597


>gi|121602974|ref|YP_980303.1| GCN5-like N-acetyltransferase [Polaromonas naphthalenivorans CJ2]
 gi|120591943|gb|ABM35382.1| GCN5-related N-acetyltransferase [Polaromonas naphthalenivorans
           CJ2]
          Length = 896

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 90/238 (37%), Gaps = 32/238 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV + ++  S   A      L  P+  +K                
Sbjct: 481 LTEMESKTLLSAFHIPVTQTILARSATEAMMIATQLGFPV-ALKID--------SPDISH 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D +G      +   V     E+    + T       +R+N V V+  A     RE+ +
Sbjct: 532 KSDVEGVALNILNATGVRDTFTEM----MQTVSRLKPNARINGVTVQTMARAKRGREVCV 587

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDML 177
            L+ D   G    IA   GG  IE +          + + PL    +  +   + + + L
Sbjct: 588 GLVTDDPFG--PVIAFGAGGTMIELIDDRA------MELPPLNQFLARHLISRSRVAETL 639

Query: 178 ----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                           +   + +  C+   +  ++INP+I+ ++G +  +D++I  D+
Sbjct: 640 GAWRGASPADMNALEQILLRVSEMVCELPQLREMDINPIIVDESGAV-AVDARIVIDN 696


>gi|317401778|gb|EFV82394.1| cyanphycin synthetase [Achromobacter xylosoxidans C54]
          Length = 856

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +++   A +A + L GP+ VVK +  + GRG     E       
Sbjct: 209 KMLLDAAGVPVPLGRSVTTAEDAWAAAQELGGPV-VVKPRDGSQGRGVAVNIETRE---- 263

Query: 69  GVRVESSLKSVISDIREIL 87
             RV  + +       E++
Sbjct: 264 --RVIQAFEVAEEISSEVI 280


>gi|296109365|ref|YP_003616314.1| carbamoyl-phosphate synthase, large subunit [Methanocaldococcus
           infernus ME]
 gi|295434179|gb|ADG13350.1| carbamoyl-phosphate synthase, large subunit [Methanocaldococcus
           infernus ME]
          Length = 1058

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 37/171 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +    K  V V +   + SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKECCKKAGVEVLRSKTVFSVDEALEFAEEIGYPIVVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +   + + L  +L            N V +E+     +E    ++ 
Sbjct: 177 -TGGGI--AYNPEELKEIVSKGLEYSLK-----------NQVLIEESVLGWKEFEYEVI- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            R       I  T   MD   V          + + P   ++ E+   + D
Sbjct: 222 -RDKNDNVIIICTIENMDPMGVHTG-----DSITVAPAQTLSDEEYQKMRD 266



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 137/417 (32%), Gaps = 69/417 (16%)

Query: 10   ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
             +L + N+P     +  +   A    K +  P+ V  S +  G                 
Sbjct: 667  KILEELNIPQPPNGIAYNEEEALKIAKEIGYPVLVRPSYVLGG---------------RA 711

Query: 70   VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS- 128
            +R+  + + +   I+E   +  ++++        + V ++   +   E+ +  + D  S 
Sbjct: 712  MRIVYNEEELKEYIKE---AVEVSEE--------HPVLIDKFLEDATEVDVDAICDGESV 760

Query: 129  --GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
              G +       G    +      PQ + K +I+ +   T      +   L ++G   I 
Sbjct: 761  LIGGIMEHIEEAGVHSGDSACVIPPQTLSKEVIEIIKDYT----RKIALKLNVKGLINIQ 816

Query: 187  GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL-RVLDSKISFDDNALYRHLDIQELRDV 245
                   +Y         +LE NP        L + +   ++     +     ++EL +V
Sbjct: 817  YAIKDDKVY---------VLEANPRASRTVPFLSKAIGLPLAKIAAKVMLGKKLKEL-NV 866

Query: 246  SEEDSREIEAKQHNLSY-----------IALDGNIGCMVNGAGLAMATMDIIKLYGGA-P 293
             E + + +  K+   S+             +      M       +A        G   P
Sbjct: 867  KEREPKMVCVKEAVFSFEKWPGVEIELSPEMKSTGEVMGIDKNFGLAYYKAQLAAGYKLP 926

Query: 294  AN----FLDVGGGADQDKVAAAFK----IITSDSSVKGILINIFGGIMRCDVLVKG---I 342
                  F           +A  FK     I +      +L N      R   + +G   I
Sbjct: 927  TEGTVLFTVGRDKEKIVDIAKGFKELGFKILATEGTYRVLKNHGIDAERVYKVFEGRPNI 986

Query: 343  LSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV-ITAIDLDDAAQKIVHAVKGV 398
            +  +K  KI++ + +  +G       +LI ++ +++ I  I     A+  + A++ +
Sbjct: 987  IDLMKSGKIDLIINIS-KGKEAKEAEQLIRKTAIDLRIPYITTVAGARAALEAIRSI 1042


>gi|290579568|ref|YP_003483960.1| putative phosphoribosylamine-glycine ligase [Streptococcus mutans
           NN2025]
 gi|254996467|dbj|BAH87068.1| putative phosphoribosylamine-glycine ligase [Streptococcus mutans
           NN2025]
          Length = 419

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 23/120 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEKAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D   E  L   V+R 
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD-GEEFSLFAFVNRD 203


>gi|241760866|ref|ZP_04758955.1| phosphoribosylamine/glycine ligase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374485|gb|EER63946.1| phosphoribosylamine/glycine ligase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 403

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 24/123 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +YN+P A+     S   A++A+     P+ V+K+   AGG+              
Sbjct: 93  KDLCARYNIPTARYQRCRSAEEAKAALDNFSTPV-VIKADGLAGGK-------------- 137

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  S       I+++          G  G     + VE+        + ++  D  +
Sbjct: 138 GVIIAESQLEAEQAIQDM-----TAGAFGKAGL---EIVVEEFMQGEEASFFAI-SDGET 188

Query: 129 GMV 131
              
Sbjct: 189 VRP 191


>gi|41353029|gb|AAS01136.1| AclB [uncultured prokaryote]
          Length = 108

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 14/108 (12%)

Query: 271 CMVNGAGLAMATMDIIKLYGG--APANFLDVGGGAD-QDKVAAA---FKIITSDSSVKGI 324
            MV G G ++   D I    G    AN+ +  GG    +    A   F ++T     +G 
Sbjct: 1   TMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETEFYAETIFDLMTRHKDPRGK 60

Query: 325 LINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           ++ I G I     + K   GI++A ++      +    + +R  G N 
Sbjct: 61  ILIIGGAIANFTDVAKTFTGIINAFEKYADKLKEHKTKIYVRRGGPNY 108


>gi|34592283|gb|AAQ76338.1| ATP citrate lyase beta [Nautilia profundicola AmH]
          Length = 112

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + +   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAETFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|85539469|emb|CAJ58464.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 117

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|327410169|emb|CBW37624.1| ATP citrate lyase beta subunit [uncultured bacterium]
          Length = 111

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGETKFYAETILDLMTREKDPKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +       ++ + + +R  G N 
Sbjct: 61  RDKIMIIGGAIANFTDVAKTFRGIIQAFENYAEKMKEVGVKIYVRRGGPNY 111


>gi|71908877|ref|YP_286464.1| cyanophycin synthetase [Dechloromonas aromatica RCB]
 gi|71848498|gb|AAZ47994.1| Cyanophycin synthetase [Dechloromonas aromatica RCB]
          Length = 751

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+    VPV +G  + S   A  A + +  P+ V  +    G  G+G F +L    + 
Sbjct: 225 KELISSVGVPVPEGREVDSADDAWEAAEDIGVPVVVKPTD---GNHGRGVFIDLTTKEEV 281

Query: 69  GVRVESSLKS 78
                 + + 
Sbjct: 282 AKAYAIATEE 291


>gi|254173847|ref|ZP_04880518.1| AcdA-3 acetate--coA ligase (ADP-forming) , alpha chain
           [Thermococcus sp. AM4]
 gi|214032096|gb|EEB72927.1| AcdA-3 acetate--coA ligase (ADP-forming) , alpha chain
           [Thermococcus sp. AM4]
          Length = 461

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 28/156 (17%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQD 306
            +  M N  G  + T D I   G   A                     N +D+   A  +
Sbjct: 299 RVAIMTNAGGPGVLTADQIDKRGLKLADLEEKTIEELRSFLPPMAAVKNPVDMIASARGE 358

Query: 307 KVAAAFKIITSDSSVKGI----LINIFGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEG 361
                 K++  D +V  +    ++  F G+   +   +G++ AVKEV    P++ + + G
Sbjct: 359 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTPTEH-AEGVIRAVKEVNNGKPVLGLFMAG 417

Query: 362 ANVDIGNRLIAESGLN-VITAIDLDDAAQKIVHAVK 396
              +    L+  +G+       D+   A  +V   +
Sbjct: 418 YVSEKAKELLEANGIPSYERPEDVAAGAYALVQQAR 453


>gi|85539457|emb|CAJ57344.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYAGKMKDVGTRIYVRRGGPNY 112


>gi|160933237|ref|ZP_02080626.1| hypothetical protein CLOLEP_02083 [Clostridium leptum DSM 753]
 gi|156868311|gb|EDO61683.1| hypothetical protein CLOLEP_02083 [Clostridium leptum DSM 753]
          Length = 428

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 63/203 (31%), Gaps = 42/203 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V S    A   I        VVK+   A G+             
Sbjct: 111 SKNLMKKYGIPTAGYEVFSEPKKAIEYITAQNKFPVVVKADGLALGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +   L+     +  I+   +     G +G   N V VE+         +S+L    
Sbjct: 158 -GVMICQDLEEAKEAVHSIMEDKIF----GASG---NQVVVEEFITGPE---VSVLSFTD 206

Query: 128 SGMVAFIASTQ--------------GGMDIEEVAKDY----PQKIFKLLIDPLIGVTSED 169
              V  + S++              GGM        Y     ++  K +  P I    E+
Sbjct: 207 GKTVVPMVSSKDHKRAYDGDRGLNTGGMGTISPNPHYSGEMARRCMKEIFQPTIDAMREE 266

Query: 170 VASLCDMLELQGQARIDGGDLFP 192
                  L        DG  +  
Sbjct: 267 GRPFQGCLYFGLMLTQDGPKVIE 289


>gi|292492067|ref|YP_003527506.1| CoA-binding protein [Nitrosococcus halophilus Nc4]
 gi|291580662|gb|ADE15119.1| CoA-binding domain protein [Nitrosococcus halophilus Nc4]
          Length = 890

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 82/227 (36%), Gaps = 20/227 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A+A+LR + +PVA  ++  S + A    + +  P+ +  +      +       L  D+
Sbjct: 495 EARAVLRAFRIPVATCMMARSPNEALVLAQEIGYPVAMKIASAQITHKSDVDGVRLHLDN 554

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLV 124
              VR                   + + +     + +  V +E        REL + ++ 
Sbjct: 555 GQAVRRAY-------------QDLINSVKNHRPDAPIEGVTIEPMCIKPNGRELMIGIIR 601

Query: 125 DRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           D   G      +    ++I  +     P     L+   + G  +     L     L    
Sbjct: 602 DPIFGPAITFGAGGTTVEILSDRVVALPPLNRSLVQSMIAG--TRISRLLGPFRNLPATN 659

Query: 184 RIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
                 +   + +  C+   +  ++INPLI+ +   +  +D++I+FD
Sbjct: 660 MEAIEQILLRVSEMVCELPWLKEMDINPLIVDECDAV-AVDARITFD 705


>gi|85539371|emb|CAJ57301.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539375|emb|CAJ57303.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539377|emb|CAJ57304.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539385|emb|CAJ57308.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539387|emb|CAJ57309.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539389|emb|CAJ57310.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539391|emb|CAJ57311.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539395|emb|CAJ57313.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539397|emb|CAJ57314.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539399|emb|CAJ57315.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539401|emb|CAJ57316.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539403|emb|CAJ57317.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539405|emb|CAJ57318.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539407|emb|CAJ57319.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539411|emb|CAJ57321.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539429|emb|CAJ57330.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539431|emb|CAJ57331.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539435|emb|CAJ57333.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539437|emb|CAJ57334.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539439|emb|CAJ57335.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539441|emb|CAJ57336.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539455|emb|CAJ57343.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
 gi|85539467|emb|CAJ57349.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|149006785|ref|ZP_01830471.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP18-BS74]
 gi|168486697|ref|ZP_02711205.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC1087-00]
 gi|237649889|ref|ZP_04524141.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae CCRI
           1974]
 gi|237820979|ref|ZP_04596824.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147761700|gb|EDK68664.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP18-BS74]
 gi|183570300|gb|EDT90828.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC1087-00]
          Length = 420

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 98/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAIYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQLILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+++      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNITWTDKGVTLGVVVASKGYPLDYSKGVEL 348


>gi|268325446|emb|CBH39034.1| putative acetyl-CoA synthetase, beta subunit [uncultured archaeon]
          Length = 235

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 81/228 (35%), Gaps = 18/228 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKAL+  + + V K V+I  +       K +  P  V+K           +    
Sbjct: 23  LFEPEAKALVSAWGIQVPKSVLIDGLEDVALKSKEI-TPPLVLKVV--------SQDILH 73

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +  G +   +  +     ++E+      T       +R+    +E+ A    EL +  
Sbjct: 74  KREFSGVITSINDSEEASIALKEM----KRTLAEKAPKARIAGFLLEETAPTGIELIIGG 129

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L D   G      +    +++  +V+        + + D +  V S  +  L      + 
Sbjct: 130 LRDPQFGPAVMFGTGGFAVELVADVSFRLAPLNREEVFDMMREVKSYPL--LTGFRGSKP 187

Query: 182 QARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                       L       + +  +EINPL++ ++ R   +D+++  
Sbjct: 188 VDIEKLASTVMKLSDILLEIEAIKEIEINPLLVYED-RAVAVDARVVL 234


>gi|121603914|ref|YP_981243.1| cyanophycin synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592883|gb|ABM36322.1| cyanophycin synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 862

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           K LLR   VPV  G   S    A +A   +  P+ VVK Q   G +GKG    
Sbjct: 209 KKLLRAAGVPVPLGRPASDPDDAWAAALEVGLPV-VVKPQ--DGNQGKGVTVN 258


>gi|158298702|ref|XP_318881.4| AGAP009786-PA [Anopheles gambiae str. PEST]
 gi|157014012|gb|EAA14291.4| AGAP009786-PA [Anopheles gambiae str. PEST]
          Length = 1383

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 21/122 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A+    +    A++ I++ P    VVK+   A G+             
Sbjct: 117 SKDFMHRHGIPTARYASFTDAAEAKTFIRSAPYAALVVKASGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + + +ILG     ++ G  G  V    VE+         L+ +  RT
Sbjct: 164 -GVIVAETIDEACAAVDDILG----ERRFGAAGEVV---VVEEKLSGEEVSVLAFVDSRT 215

Query: 128 SG 129
             
Sbjct: 216 VR 217


>gi|323097767|emb|CBJ18445.1| ATP citrate lyase [uncultured bacterium]
          Length = 116

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 21/116 (18%)

Query: 270 GCMVNGAGLAMATMDIIKLY----GGAP---ANFLDVGGGADQDKVAAAFKIIT------ 316
             MV G G ++   D I  Y    GG+    AN+ +  GG    +     + +       
Sbjct: 1   WTMVAGGGASVVYADTIADYAEETGGSIKDLANYGEYSGGPTTGETKFYAETLFDLMTRH 60

Query: 317 SDSSVKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            D   +  ++ I G I     + K   GI+ A++E      + N  + +R  G N 
Sbjct: 61  KDPRGRDKILMIGGAIANFTDVAKTFTGIIQALEEYADKLKEHNTKIYVRRGGPNY 116


>gi|41353025|gb|AAS01134.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYG--GAPANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D +   G     AN+ +  G   + +     K +          S 
Sbjct: 1   WTMVAGGGASVVYADTVADLGQVEELANYGEYSGNPSRTETREYVKTVFDLMTREKHESG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           K  ++ I G I     + K   GI+ A+KE       + I + +R  G N 
Sbjct: 61  KPKILIIGGAIANFTDVAKTFDGIMDAMKEYADKLKDVGIRIYVRRGGPNY 111


>gi|299529567|ref|ZP_07043004.1| cyanophycin synthetase [Comamonas testosteroni S44]
 gi|298722430|gb|EFI63350.1| cyanophycin synthetase [Comamonas testosteroni S44]
          Length = 748

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G +++S   A    + +  P+ V
Sbjct: 247 KRLLAACGVPVPEGQIVASPEEAWEVAQDIGFPVTV 282


>gi|319763101|ref|YP_004127038.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
 gi|317117662|gb|ADV00151.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
          Length = 703

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 74/225 (32%), Gaps = 25/225 (11%)

Query: 3   IHEYQAKALLRKYN-VPVAKGVVISSVHAAESAIKT-LPGPLYVVKSQIHAGGRGKGRFK 60
           + E+  K LL     V +  G ++     A  A+ + LP P+           +      
Sbjct: 493 LSEWDGKRLLASQQSVQIPAGRLLK----AGEALPSGLPYPVVAKLQSDQLLHKSDAGGV 548

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            L       ++   SL+  I  + E LG+ L        G  V  + VE       EL L
Sbjct: 549 ALR------IQDAPSLQEAIERLHE-LGAGL--------GIPVQGILVEQMLPFDHELLL 593

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-EL 179
            L   R       +   +GG++ E         +     D    +       L       
Sbjct: 594 GL--RREPRFGPVLTLARGGIEAELDPDVVNLLLPANADDIAQMLGRLRCFKLLQGFRGR 651

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
            G           +L + F  + +  LEINPL I  + ++  LD+
Sbjct: 652 PGADMPALARRIADLCEWFLQQPLRELEINPLAIQGS-QMWALDA 695


>gi|291528553|emb|CBK94139.1| carbamoyl-phosphate synthase, large subunit [Eubacterium rectale
           M104/1]
          Length = 1068

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +P A G  + +   A+     +  P+ V  S +  G                G
Sbjct: 673 EILQKTGIPRAAGGTVFTAEEAKKVANEIGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  +   +   I     I     I       G  +    + DG DI
Sbjct: 718 MKIAWNDDEIEEFIGIINTITQDHPILVDKYLMGKEIEVDAICDGTDI 765


>gi|291523985|emb|CBK89572.1| carbamoyl-phosphate synthase, large subunit [Eubacterium rectale
           DSM 17629]
          Length = 1068

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +P A G  + +   A+     +  P+ V  S +  G                G
Sbjct: 673 EILQKTGIPRAAGGTVFTAEEAKKVANEIGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  +   +   I     I     I       G  +    + DG DI
Sbjct: 718 MKIAWNDDEIEEFIGIINTITQDHPILVDKYLMGKEIEVDAICDGTDI 765


>gi|264676746|ref|YP_003276652.1| cyanophycin synthetase [Comamonas testosteroni CNB-2]
 gi|262207258|gb|ACY31356.1| cyanophycin synthetase [Comamonas testosteroni CNB-2]
          Length = 748

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G +++S   A    + +  P+ V
Sbjct: 247 KRLLAACGVPVPEGQIVASPEEAWEVAQDIGFPVTV 282


>gi|238923139|ref|YP_002936652.1| carbamoyl phosphate synthase large subunit [Eubacterium rectale
           ATCC 33656]
 gi|259585679|sp|C4ZEK2|CARB_EUBR3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|238874811|gb|ACR74518.1| carbamoyl phosphate synthase large subunit [Eubacterium rectale
           ATCC 33656]
          Length = 1068

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +P A G  + +   A+     +  P+ V  S +  G                G
Sbjct: 673 EILQKTGIPRAAGGTVFTAEEAKKVANEIGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  +   +   I     I     I       G  +    + DG DI
Sbjct: 718 MKIAWNDDEIEEFIGIINTITQDHPILVDKYLMGKEIEVDAICDGTDI 765


>gi|171915331|ref|ZP_02930801.1| acetyl-CoA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 916

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 1/83 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  Y +PV +  V ++V+ A      +  P+ +         +       L
Sbjct: 511 LTETESKEILAAYGIPVVETRVATTVNHAVHLADAIGYPVAIKLHSKTVTHKSGMGGVRL 570

Query: 63  PADSKGGVRVES-SLKSVISDIR 84
                 GVR+    ++  +    
Sbjct: 571 DICHAEGVRLAWLEIEQAVQKAA 593



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 36/196 (18%)

Query: 216 NGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNG 275
            GR  VLD+  +F    + R   ++E+ +++E  +++   +  +L+ +          N 
Sbjct: 278 TGRDAVLDA--AFHRAGVLRVNTLEEMFNMAEVLAKQPPPRGPHLAIV---------TNA 326

Query: 276 AGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKVAAAFKI 314
            G      D +   GG  A                     N LD+ G AD  + AAA + 
Sbjct: 327 GGPGALAADRLVASGGKMAELSSECLSKLSAVLPPHWSHGNPLDILGDADVGRYAAAVEA 386

Query: 315 ITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
              +  V G+ + +    +     + + ++ A +     + L   + GA V+ G  ++  
Sbjct: 387 ACQEPGVDGVCVILTPQSMTAPGAIAERVIQATQSSGKPV-LASWMGGAAVEQGREILNT 445

Query: 374 SGLNVITAIDLDDAAQ 389
           +G+      D+  AA+
Sbjct: 446 AGIPTYDFPDM--AAR 459


>gi|323097771|emb|CBJ18447.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAEG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       ++++ + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVDVKIYVRRGGPNY 111


>gi|306481125|emb|CBN08508.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 111

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREPDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +  +  V     +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKAVDTKIYVRRGGPNY 111


>gi|221069121|ref|ZP_03545226.1| cyanophycin synthetase [Comamonas testosteroni KF-1]
 gi|220714144|gb|EED69512.1| cyanophycin synthetase [Comamonas testosteroni KF-1]
          Length = 748

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G +++S   A    + +  P+ V
Sbjct: 247 KRLLAACGVPVPEGQIVASPEEAWEVAQDIGFPVTV 282


>gi|328954397|ref|YP_004371731.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454721|gb|AEB10550.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 890

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 125/418 (29%), Gaps = 64/418 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K +L    +PV   +               + G   V    +   G+ K     + +   
Sbjct: 52  KEIL---GIPVFPSIAAVPADIDLAIVAVPIKGVADV----MRECGQAKVSGAIIISAGG 104

Query: 68  GGVRVESSLKSV-ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             V  E       I    +  G   +       G                 L  S     
Sbjct: 105 KEVGEEGEKIEADIHAAAQAYGIRYLGPNCM--GILC----------PRSRLNASFAAHS 152

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                  + S  G +    +     Q I       +  +   D A + D L         
Sbjct: 153 VRPGSVALLSQSGAICSVILDLAESQNIGFSHFVSIGSMADLDFAEMIDYLG-NDDQVRS 211

Query: 187 GGDLFPNL--YKAFCDKDMSLLEINPLIIMKNGRLRVL--------DSKISFD--DNALY 234
                 NL  ++ F     S+  + P+I++K+GR             +    D   NA +
Sbjct: 212 ILIYMENLVHHRKFMSAARSVSRVKPIIVVKSGRSEAAARAATSHTGALAGNDAAYNAAF 271

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
           +   I  +  +++         + N     L GN+  + N  GL +  +D    +   PA
Sbjct: 272 QRAGIIRVDTIAQLFDCAEAMARTN---RPLGGNLAIITNAGGLGVMAVDACSKWKREPA 328

Query: 295 ---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGI 332
                                N +D+ G A  ++   A + + +   V G+L  +    +
Sbjct: 329 VLSPETVALLDKGLPPYWSRSNPIDILGDAPPERYLTAVRGVMAAPEVSGVLALLSPQAM 388

Query: 333 MRCDVLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
                + + ++  +K  K   P   + + G +V  G +L+ E+ +   T    ++A  
Sbjct: 389 TDPTAVAQTLIPEIK--KQAKPFFAVWMGGQDVTAGIKLLNEAEVP--TFGTPEEAVD 442


>gi|144899932|emb|CAM76796.1| GCN5-related N-acetyltransferase:CoA-binding [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 907

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 75/230 (32%), Gaps = 19/230 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK +L  Y +P     +  +   A    KT+ GP+  +K                
Sbjct: 492 LTEAEAKTVLSAYGIPTVPTHIAGTPAEASRIAKTIDGPV-ALKI--------LSTDIVH 542

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLS 121
            +D  G V   +    V      +L     T  +    G  V    +       +EL + 
Sbjct: 543 KSDVGGVVLNLTGPFDVEKAAYAMLDRVKATYPEARIEGFTVQP-MIT-RRPGTQELIVG 600

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLEL 179
           +  D   G V      QGG+ +E +  D    +  L ++    +   +     L      
Sbjct: 601 VATDPIFGPVILFG--QGGVAVEVIG-DRAVALPPLNLNLAAELIQRTRVARLLKGYRGR 657

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                         + +   D  ++  L+INPL    +G +  LD+ I  
Sbjct: 658 PPANLDALHMTLIQVSQMVIDLPEIIELDINPLRCDADG-VLALDAAIKV 706



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 29/173 (16%)

Query: 231 NALYRHLDIQELRDVSEED-SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           +A  R   +  ++D+ E   + E  A+   +    L      + NG GL +   D +   
Sbjct: 269 DAAIRRSGMLRVQDIEEIFGAVETLARSRPMKGKRL----AIVTNGGGLGVIAADDLADG 324

Query: 290 GGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG  A                     N +DV G A  ++ A    I+     +  +L+ +
Sbjct: 325 GGELADLPLDVVDKLNALLPPNWSRGNPIDVVGDAGGERYAKTLSILLDCKCIDAVLV-M 383

Query: 329 FG--GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
           +    I   D + + ++   K+      +   +    V    R  A++G+   
Sbjct: 384 YAPTAISNPDEVAEAVIKVYKDKPRANIMTCWVGHQKVAGARRKFADAGVPTF 436


>gi|113475629|ref|YP_721690.1| cyanophycin synthetase [Trichodesmium erythraeum IMS101]
 gi|110166677|gb|ABG51217.1| cyanophycin synthetase [Trichodesmium erythraeum IMS101]
          Length = 902

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 11/100 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   VPV +G V       + AI+ + G   V+K      GRG     +   ++  
Sbjct: 224 KRILKDAGVPVPRGTVARYFDELQDAIEYVGGYPIVIKPLDGNHGRGITIDVKNWQEA-- 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
                   +      R+   +  +  +   TG   + V V
Sbjct: 282 --------EEAYDLARKASKTKTVIVERYYTGKD-HRVLV 312


>gi|306828493|ref|ZP_07461688.1| phosphoribosylamine-glycine ligase [Streptococcus mitis ATCC 6249]
 gi|304429292|gb|EFM32377.1| phosphoribosylamine-glycine ligase [Streptococcus mitis ATCC 6249]
          Length = 420

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|269124470|ref|YP_003297840.1| phosphoribosylamine/glycine ligase [Thermomonospora curvata DSM
           43183]
 gi|268309428|gb|ACY95802.1| phosphoribosylamine/glycine ligase [Thermomonospora curvata DSM
           43183]
          Length = 415

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 40/128 (31%), Gaps = 33/128 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R   VP A   V  +     +A   L GP YVVK    A G+             
Sbjct: 106 AKEVMRAAGVPTADSRVCQTPEEV-AAALELFGPPYVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V    +                            V +E+  D   E+ L  L D T
Sbjct: 152 -GVVVTEDREQAARHAAA-----------------CGRVVIEEFLD-GPEVSLFALSDGT 192

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 193 NAVPLLPA 200


>gi|33603681|ref|NP_891241.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50]
 gi|33577806|emb|CAE35071.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50]
          Length = 710

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 86/233 (36%), Gaps = 32/233 (13%)

Query: 3   IHEYQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGP---LYVVKSQIHAGGRGKGR 58
           + E   K LLR+  V  V  G+++S      +A   LP P     V K Q  +       
Sbjct: 499 LAECDGKTLLRELGVAGVPAGMLVS-----AAAPDRLPAPLAYPVVAKLQAASL------ 547

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                +D  G V    S   +   +  + G           G     V VE       EL
Sbjct: 548 --LHKSDIGGVVLNIGSDAQLREAVHRLAG------IAQAHGIEARGVLVEPMQPFDHEL 599

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            L L  D   G    +   +GG+++E  A    Q +          + S   A L     
Sbjct: 600 LLGLRRDPRFGATLTLG--RGGVEVELDADVASQLLPLSAGAIQAMLESLRAARLFK--G 655

Query: 179 LQGQARIDGGDL---FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
            +G+  +D   L     +L + F  + D++ +EINPL +  + R  VLD+ +S
Sbjct: 656 FRGRGAVDLAALSSQIADLCRIFLAQPDLAEVEINPLAVRGD-RAWVLDAVVS 707


>gi|67921414|ref|ZP_00514932.1| Phosphoribosylglycinamide synthetase [Crocosphaera watsonii WH
           8501]
 gi|67856526|gb|EAM51767.1| Phosphoribosylglycinamide synthetase [Crocosphaera watsonii WH
           8501]
          Length = 437

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+    + +A+G       AA++ I     P+ VVK+   A G+             
Sbjct: 126 AKKLMADAGIAIAQGETFKDADAAKAYIAKQGAPI-VVKADKLAAGK------------- 171

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + + E++G       TG +   V      +   IL       L D  
Sbjct: 172 -GVIVAQTIEEAQTAVDELIG-------TGFSSIVVEEFLQGEEVSIL------ALTDGK 217

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 218 TVRPLLPA 225


>gi|220912390|ref|YP_002487699.1| CoA-binding protein [Arthrobacter chlorophenolicus A6]
 gi|219859268|gb|ACL39610.1| CoA-binding domain protein [Arthrobacter chlorophenolicus A6]
          Length = 894

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 63/230 (27%), Gaps = 23/230 (10%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A +LL  Y + V       +   A  A + L  P+ V  +      R       L     
Sbjct: 676 AASLLGHYGISVLPSAAFDTPDEAVEAAEVLGWPVAVKTTDPALRHRLDLGGVRL----- 730

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   ++   S  R++L         G     V        A + +      + D  
Sbjct: 731 -------DIQDAESLRRDVLQMRRALALYGDPALEVQS-----MAPVGQACTFRAIEDPL 778

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            G V         +++ +        +    +   I         L     L        
Sbjct: 779 LGPVISFGLAGDAVNLLDDWSHRVPPLSAADVHDFI-RAPRAARKLFGYQGLPAVDVSAL 837

Query: 188 GDLFPNLYKAFCDK-DMSLLEINP-LIIMKNGRLRVLDSKISFDDNALYR 235
            DL   L     +  +++L+E NP L       +   D +I    NA  R
Sbjct: 838 EDLAGRLAWMKDNHPEIALVEFNPVLCGTSGATILAADVRIG---NAAQR 884


>gi|169825822|ref|YP_001695980.1| phosphoribosylamine--glycine ligase [Lysinibacillus sphaericus
           C3-41]
 gi|168990310|gb|ACA37850.1| Phosphoribosylamine--glycine ligase [Lysinibacillus sphaericus
           C3-41]
          Length = 419

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A     +    A + IK    P+ V+K+   A G+             
Sbjct: 106 AKDVMSKYNIPTAAHKTFTDAEQAIAYIKEQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  +++++G+          G   + V +E+  D     ++S +    
Sbjct: 152 -GVVVAMTEQEAIEAVQDMIGNQRF-------GESSSRVVIEEFLDGEEFSFMSFVHKGQ 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 IY-PMVIA 210


>gi|163856171|ref|YP_001630469.1| cyanophycin synthetase [Bordetella petrii DSM 12804]
 gi|163259899|emb|CAP42200.1| cyanophycin synthetase [Bordetella petrii]
          Length = 946

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  VPV +G  + S   A  A + +  P+ V       G  G+G F  L + ++ 
Sbjct: 300 KTLLSESGVPVPEGRQVDSPADAWEAAQDIGLPVVVKPCD---GNHGRGVFTNLASQTEV 356

Query: 69  GVRVESSLKS 78
                 +++ 
Sbjct: 357 LSAYAVAVEE 366


>gi|148658146|ref|YP_001278351.1| carbamoyl-phosphate synthase large subunit [Roseiflexus sp. RS-1]
 gi|148570256|gb|ABQ92401.1| carbamoyl-phosphate synthase large subunit [Roseiflexus sp. RS-1]
          Length = 1113

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 37/175 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V  G  +S+V  A      +  P+ V  S    G            
Sbjct: 129 RELFKRAMINAGLRVPLGETVSTVDQALDVAARIGYPVLVRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S GGV    +   +       L ++            V  V +E      +E  L ++ 
Sbjct: 177 -SGGGV--AYNEAQLREIADRGLRAS-----------PVTQVLIEQSVLGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           DR +     + S      IE +          + I P + +T  +   L +M ++
Sbjct: 223 DR-ADNFVVVCS------IENLDPMGVHTGDSITIAPAMTLTDREYQRLREMAKI 270


>gi|78044289|ref|YP_359136.1| acetyl-CoA synthase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996404|gb|ABB15303.1| acetyl-CoA synthase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 716

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 78/185 (42%), Gaps = 18/185 (9%)

Query: 225 KISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV---------NG 275
           K++F    L R   ++E+   +   +   +    N+  +   G  G +          N 
Sbjct: 277 KLAFAKTGLIRAKTLEEMFIYARVFASGQKVTGKNIGIVTNSGGPGVITADRLELNGLNI 336

Query: 276 AGLAMATMDIIKLYGGAPANF---LDVGGGADQDKVAAAFKIITSDSSVKGILINIFG-- 330
            GL+  T++ +K +    A+F   +D+ G AD++K A   K +  D  V G+ + ++G  
Sbjct: 337 TGLSAKTINELKTFLPRAASFGNPVDILGDADEEKYAMTLKTVLDDEKVDGV-VAVYGKT 395

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQK 390
            ++  + +V+ +++  ++      +   L G +      L+ ++ +   +     +AA  
Sbjct: 396 AVIDMEKMVQAVINGRRKNPDKPVVACFLGGVDSRRAKELLNKNKIPFYSFP---EAAAD 452

Query: 391 IVHAV 395
            +  +
Sbjct: 453 ALAVL 457


>gi|312866980|ref|ZP_07727191.1| phosphoribosylamine--glycine ligase [Streptococcus parasanguinis
           F0405]
 gi|311097462|gb|EFQ55695.1| phosphoribosylamine--glycine ligase [Streptococcus parasanguinis
           F0405]
          Length = 421

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 101/285 (35%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D   E  L   V+R 
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD-GEEFSLFAFVNRD 203

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
              +   A                    K   D   G  +  + +   +  L        
Sbjct: 204 KFYIMPTAQD-----------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +S+   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNSRFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+  +++      +G +V   G  +A    +KL
Sbjct: 304 DFAQNITDILDSKEPAITWTDKGVTLGVVVASNGYPLAYEKGVKL 348


>gi|20804029|emb|CAD31606.1| PUTATIVE LIGASE/CARBOXYLASE PROTEIN [Mesorhizobium loti R7A]
          Length = 425

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 22/104 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL K  VP+    + ++    E A   +  P+ V+K  + +G                
Sbjct: 118 RQLLEKAGVPIPAYRLAANAIDVECAAAEIGLPV-VLKPAVGSG--------------SS 162

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GVR+  ++  +      +L    I + +         + +E+ A
Sbjct: 163 GVRLCRNIDELAEHTAYLLNGKHIWRSSP-------RILIEEFA 199


>gi|85539379|emb|CAJ57305.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKSADKMKDVGTRIYVRRGGPNY 112


>gi|41353041|gb|AAS01142.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGAN 363
           +G ++ I G I     + K   GI+ A +  K  +  V     +R  G N
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYKDKLKAVDTKIYVRRGGPN 110


>gi|83647295|ref|YP_435730.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Hahella
           chejuensis KCTC 2396]
 gi|83635338|gb|ABC31305.1| Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Hahella chejuensis KCTC 2396]
          Length = 375

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 42/175 (24%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE   KAL  +  +P  K  +++S      A + L  P+          G+G+   K   
Sbjct: 100 HE---KALFTQLGIPTPKYRLVNSPKELAEAARELGTPVVAKSITEGYDGKGQAVLKSAA 156

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                                               G     + VE   +  RE  +S++
Sbjct: 157 EAE---------------------------AAWNNIGHP--RLIVESFVNFSRE--ISII 185

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             R+        ST   +        +   I +  I P   +++E      + +E
Sbjct: 186 AARS--------STGETVTYPLAENIHHGGILRYTIAPAPRISAELAQKAAEYIE 232


>gi|320160651|ref|YP_004173875.1| lysine biosynthesis protein LysX [Anaerolinea thermophila UNI-1]
 gi|319994504|dbj|BAJ63275.1| lysine biosynthesis protein LysX [Anaerolinea thermophila UNI-1]
          Length = 316

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L K  VP  +  V  +  AA  AI+ L  P+ V+K  I + GR   +  +          
Sbjct: 96  LAKAGVPQPRIKVAFTPEAALQAIEELGYPV-VLKPVIGSWGRLLAKIND---------- 144

Query: 72  VESSLKSVISDIREILGS 89
                   I + +E LGS
Sbjct: 145 --RDAAEAILEHKETLGS 160


>gi|124266216|ref|YP_001020220.1| cyanophycin synthetase [Methylibium petroleiphilum PM1]
 gi|124258991|gb|ABM93985.1| cyanphycin synthetase [Methylibium petroleiphilum PM1]
          Length = 855

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LLR   VPV  G +++S   A +    +  P+ VVK Q   G +GKG    +   +  
Sbjct: 209 KTLLRAAGVPVPIGRLVASADEAWAVALEIGLPV-VVKPQ--DGNQGKGVTVNIVDRAHL 265

Query: 69  GVRVESSLK 77
            V  +++ +
Sbjct: 266 DVAFKAAAE 274


>gi|254463818|ref|ZP_05077229.1| CoA-binding [Rhodobacterales bacterium Y4I]
 gi|206684726|gb|EDZ45208.1| CoA-binding [Rhodobacterales bacterium Y4I]
          Length = 676

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 69/223 (30%), Gaps = 36/223 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E  AK  L  Y + V +    +S   A +    +  P+ +           KG       
Sbjct: 476 EADAKWQLASYGLRVPRSKRAASATNARAVAVDVGFPVVL-----------KGEGVAHKT 524

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           ++   V   +S + V      +                 +   VE+     + EL + ++
Sbjct: 525 EAGAVVLNLNSGQEVSDAAFSM---------------PASRFLVEEMVTGAVAELLIGVV 569

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D   G V  +A+  GG   E +       +     D    + S  ++ L D    +G  
Sbjct: 570 KDPAHGFVMTLAA--GGTLTELMEDSASFLLPASDADIEAALQSLRISKLLD--GYRGAP 625

Query: 184 RIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRV 221
             D   +   +     Y       +  +EINPL+      +  
Sbjct: 626 AADREAILRAIRAVEAYVMENALGLEEIEINPLLCTPTDAVAA 668


>gi|171060709|ref|YP_001793058.1| cyanophycin synthetase [Leptothrix cholodnii SP-6]
 gi|170778154|gb|ACB36293.1| cyanophycin synthetase [Leptothrix cholodnii SP-6]
          Length = 727

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 23/185 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KALLR   VPV +G V +   AA    + +  P+ VVK      GRG      L   ++ 
Sbjct: 225 KALLRAVGVPVPEGQVAADPAAAWEIAQDIGLPV-VVKPTDANHGRG----VSLDLGNRQ 279

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG--ADILRELYLSLLVDR 126
            V     +    ++  E++    +           + V V DG      R   L +  D 
Sbjct: 280 DVESAWGV--ARAEGSEVIVERYVRGDE-------HRVLVVDGQVVAAARGESLWITGDG 330

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
              +V  I S Q  +D      +    +  + +D         +  L +   L G +  +
Sbjct: 331 HGSVVQLIDS-QLNIDPRRGDAE-EFPLETIRLD-----REPVIRLLLERQGLDGTSVPE 383

Query: 187 GGDLF 191
            G   
Sbjct: 384 AGRRI 388


>gi|296391820|ref|ZP_06881295.1| hypothetical protein PaerPAb_26868 [Pseudomonas aeruginosa PAb1]
          Length = 696

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  L+ + +P+ +G V+S+   A  A   L  P  V+K+   A           
Sbjct: 481 LDEWQSKQALKPFGLPLPQG-VLSTPGQAREAALDLGFP-LVLKAVSAAL---------P 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                GGV +    ++ +     +        +  P       V +E  A   L EL + 
Sbjct: 530 HKTEAGGVALGLRNEAALEAA--LFDMRESLARHAPQ-LVFERVLLERMAGAPLAELIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 587 VKREEGFGLALVIGA--GGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRP 644

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
             +          + +  C+    LLE  +NPL+    G L  +D+ I  
Sbjct: 645 AVSMEALVAAIRAVAEFACEHAERLLELDVNPLLADAEGAL-AVDALIRL 693


>gi|124266215|ref|YP_001020219.1| cyanophycin synthetase [Methylibium petroleiphilum PM1]
 gi|124258990|gb|ABM93984.1| cyanophycin synthetase [Methylibium petroleiphilum PM1]
          Length = 755

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 20/103 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+   VPV +G V+ SV AA  A + +  P+                 K    +   
Sbjct: 259 KRLLKSCGVPVPEGEVVDSVEAAWEAAQDIGLPV---------------ALKPTDGNHGR 303

Query: 69  GVRVESSLKSVISDI---REILGSTLITKQTGPTGSRVNCVYV 108
           GV ++ + +  I       ++ GS ++ ++  P G   + + V
Sbjct: 304 GVTLDLTSREDIEAAYAYADLHGSEVMVERHVP-GQE-HRLLV 344


>gi|306481121|emb|CBN08506.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 111

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYADKMKAVDLKIYVRRGGPNY 111


>gi|154150377|ref|YP_001403995.1| carbamoyl phosphate synthase large subunit [Candidatus
           Methanoregula boonei 6A8]
 gi|167006442|sp|A7I6J1|CARB_METB6 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|153998929|gb|ABS55352.1| carbamoyl-phosphate synthase, large subunit [Methanoregula boonei
           6A8]
          Length = 1053

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 43/213 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+ +   PV K +V++++   + AI  +  P  V                        
Sbjct: 131 RDLMNEIGEPVPKSIVLNTLSQIDDAIAKIGLPAVV------------------------ 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             R   +L      I           + G + SR++ V +E+     +EL   ++  R S
Sbjct: 167 --RPAYTLGGAGGGIGRTREELTRIVELGLSRSRIHQVLIEESVMGWKELEFEVM--RDS 222

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                I  +   +D   +     + +    I    D    +       +   L++QG   
Sbjct: 223 TDTCIIVCSMENVDP--MGIHTGESVVVAPILTLRDDEFQMMRSAAIHIIRALDVQGGCN 280

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I           AF D D  ++E+NP +   + 
Sbjct: 281 IQF---------AFKDGDYRVIEVNPRVSRSSA 304


>gi|154484782|ref|ZP_02027230.1| hypothetical protein EUBVEN_02500 [Eubacterium ventriosum ATCC
           27560]
 gi|149734630|gb|EDM50547.1| hypothetical protein EUBVEN_02500 [Eubacterium ventriosum ATCC
           27560]
          Length = 1065

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 65/204 (31%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K ++P   G  + +   A+     L  P+ V  S +  G                G
Sbjct: 673 EILEKCSIPRPTGGTVFTAEEAKEVANRLGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +++ +  + V   +     I     I       G+ V    + DG DIL    +  +++ 
Sbjct: 718 MQIATCDEEVEEFMEIINRIAQDHPILVDKYLQGTEVEVDAICDGTDIL----IPGVMEH 773

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                   A    G  I          + K +ID +   T      L   L ++G   I 
Sbjct: 774 IER-----AGVHSGDSISVYPAYS---LSKEIIDTIEDYTE----KLARSLHVKGMINIQ 821

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                  +Y         ++E+NP
Sbjct: 822 FIVCDGKVY---------VIEVNP 836


>gi|116694324|ref|YP_728535.1| pimeloyl-CoA synthetase [Ralstonia eutropha H16]
 gi|113528823|emb|CAJ95170.1| Pimeloyl-CoA synthetase [Ralstonia eutropha H16]
          Length = 718

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 74/231 (32%), Gaps = 29/231 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E  AK +L    V +    ++ +   A  A + +  P+ V    + A  + K       +
Sbjct: 491 EVDAKRVLAGAGVALLDERLVHTPAQAAEAAREIGRPVAVK--VVSADIQHK-------S 541

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           D  G     +S +     +R + G            +R++   V    +   E  + +  
Sbjct: 542 DVGGVALSLASPEEAAQAVRRMAGEI----PRKAPTARIDGYLVSPMLNDGVECIVGVHA 597

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS------LCDMLE 178
           D   G V       GG+ +E +            +D    +  E V        L     
Sbjct: 598 DPLFGPVVMFG--LGGVMVEVMQDV---AFALAPLDEAGAL--ELVRRVKGHRLLTGFRG 650

Query: 179 LQGQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDSKI 226
                         ++ +        +  LE+NPL ++  G+ +  LD+ +
Sbjct: 651 RPPADLPALARAIASISRLAARNADRLQALEVNPLCVLPEGQGVVALDAVV 701


>gi|307941775|ref|ZP_07657130.1| CoA-binding domain-containing protein [Roseibium sp. TrichSKD4]
 gi|307775383|gb|EFO34589.1| CoA-binding domain-containing protein [Roseibium sp. TrichSKD4]
          Length = 910

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 80/227 (35%), Gaps = 25/227 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+L+ Y++P+ +  +  +   A          G   VVK                 +   
Sbjct: 505 AILKAYHIPIIETCLAQTPEEAADLSCKFFDEGRHCVVK--------LISPDLPFKSKFD 556

Query: 68  GGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           G      S ++V +   +++  T     +   TG  V+   +ED      ELY+  L D 
Sbjct: 557 GVRLGVESPEAVRATAEDLIAKTKAAYPEATITGVTVHP-MLEDR--HGVELYMG-LADT 612

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE----LQGQ 182
           +      +    GG  +E+      +      +D  +     D   +  +L         
Sbjct: 613 SVFGPVMVF-GHGGTAVEDSLDVSLEL---PPLDLNLASAMIDRTRIVRLLNGGDTRPRL 668

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            R         L +   D  ++  L+INP+++ K G +  LD++++ 
Sbjct: 669 DREAVALALVKLSQITIDIPEILELDINPIVVRKEG-ILALDARMTL 714


>gi|254967029|gb|ACT97550.1| putative D-alanine-D-alanine ligase [uncultured organism]
          Length = 348

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 58/207 (28%), Gaps = 41/207 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHA--AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L R + +P  + V++S      A    + L  P  V               K     
Sbjct: 139 SKQLFRTHGIPTPEAVILSESDKCRAAELCEKLGLPCVV---------------KPASLG 183

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           S  GV +  ++    + +                    + V VE      RE  + ++  
Sbjct: 184 SSVGVSIVRTIDEFFTALDSAFSLE-------------HTVIVEKYIK-GREFAVGIVGS 229

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           R    +  I          +       +I    ID       +E    +  +L L   AR
Sbjct: 230 RVLPAIEIIPKHGFYDYKNKYQPGCTVEICPADIDSDTAERMAEATRKVFRVLGLGAYAR 289

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPL 211
            D             +  +  LE N L
Sbjct: 290 ADF---------MVDENGIYCLEANTL 307


>gi|288930683|ref|YP_003434743.1| ATP-grasp domain protein [Ferroglobus placidus DSM 10642]
 gi|288892931|gb|ADC64468.1| ATP-grasp domain protein [Ferroglobus placidus DSM 10642]
          Length = 197

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 74/214 (34%), Gaps = 32/214 (14%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y +PV + +V S+      A + +  P+ VVK  +       G F +             
Sbjct: 16  YGIPVVETLVASNEEEVLKAAEKIGYPV-VVKPNVSEHKSEIGVFLD-----------VK 63

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S + ++   + + G  ++  Q    G                E++L    D+  G    +
Sbjct: 64  SDEELLKCYKNLGGEVVV--QKMIRGF---------------EIFLGAKEDKFFGKYVAL 106

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
               GG+ +E       + +     D L  V    ++ +               ++    
Sbjct: 107 GC--GGVLVELFEDVSFRVLPLRRRDVLEMVEETKLSKVARGFRSYKLDVESLVEVVLRF 164

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            +    +++   ++NPLI  +NG +  +D++I  
Sbjct: 165 SELIEKENVKEADVNPLIANENG-VFAVDARIIL 197


>gi|300311486|ref|YP_003775578.1| cyanophycin synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074271|gb|ADJ63670.1| cyanophycin synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 732

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G ++ S   A  A + +  P+ V     + G   +G F +L    + 
Sbjct: 222 KSLLETCGVPVPEGRLVESPEDAWEAAQDIGLPVVVKPCDANHG---RGVFIDLNTREEI 278

Query: 69  GVRVESSLKS 78
               + +L+ 
Sbjct: 279 ETAYKVALEE 288


>gi|153853362|ref|ZP_01994771.1| hypothetical protein DORLON_00760 [Dorea longicatena DSM 13814]
 gi|149754148|gb|EDM64079.1| hypothetical protein DORLON_00760 [Dorea longicatena DSM 13814]
          Length = 1066

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 58/201 (28%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEQCEIPRPTGGTVFTAEEAKKVANRLGYPVLVRPSYVL-GGQGMQIAIND------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 +   I  I  I     I       G  +    V DG DI   L   ++      
Sbjct: 725 ----HDIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGEDI---LIPGIMEHIERA 777

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            +        G  I         +  K  I       +E    L   L + G   I    
Sbjct: 778 GI------HSGDSISVYPAQSISQKTKETI-------AEYTRRLAKSLHVIGLINIQF-- 822

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                    C +D+ ++E+NP
Sbjct: 823 -------IVCGEDVYVIEVNP 836


>gi|116053125|ref|YP_793446.1| hypothetical protein PA14_65810 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588346|gb|ABJ14361.1| putative acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 696

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  L+ + +P+ +G V+S+   A  A   L  P  V+K+   A           
Sbjct: 481 LDEWQSKQALKPFGLPLPQG-VLSTPGQAREAALDLGFP-LVLKAVSAAL---------P 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                GGV +    ++ +     +        +  P       V +E  A   L EL + 
Sbjct: 530 HKTEAGGVALGLRNEAALEAA--LFDMRESLARHAPQ-LVFERVLLERMAGAPLAELIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 587 VKREEGFGLALVIGA--GGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRP 644

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
             +          + +  C+    LLE  +NPL+    G L  +D+ I  
Sbjct: 645 AVSMEALVAAIRAVAEFACEHAERLLELDVNPLLADAEGAL-AVDALIRL 693


>gi|307705091|ref|ZP_07641971.1| phosphoribosylamine-glycine ligase [Streptococcus mitis SK597]
 gi|307621351|gb|EFO00408.1| phosphoribosylamine-glycine ligase [Streptococcus mitis SK597]
          Length = 421

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAVYETFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|304939605|emb|CBH30819.1| ATP citrate lyase [uncultured bacterium]
          Length = 112

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMAREKDEK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|268325758|emb|CBH39346.1| conserved hypothetical protein [uncultured archaeon]
          Length = 233

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 81/228 (35%), Gaps = 18/228 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKAL+  + + V K V+I  +       K +  P  V+K           +    
Sbjct: 21  LFEPEAKALVSAWGIQVPKSVLIDGLEDVALKSKEI-TPPLVLKVV--------SQDILH 71

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +  G +   +  +     ++E+      T       +R+    +E+ A    EL +  
Sbjct: 72  KREFSGVITSINDSEEASIALKEM----KRTLAEKAPKARIAGFLLEETAPTGIELIIGG 127

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L D   G      +    +++  +V+        + + D +  V S  +  L      + 
Sbjct: 128 LRDPQFGPAVMFGTGGFAVELVADVSFRLAPLNREEVFDMMREVKSYPL--LTGFRGSKP 185

Query: 182 QARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                       L       + +  +EINPL++ ++ R   +D+++  
Sbjct: 186 VDIEKLASTVMKLSDILLEIEAIKEIEINPLLVYED-RAVAVDARVVL 232


>gi|159111022|ref|XP_001705744.1| Acetyl-CoA synthetase [Giardia lamblia ATCC 50803]
 gi|5514636|gb|AAD44021.1|AF107206_1 acetyl-CoA synthetase [Giardia intestinalis]
 gi|157433833|gb|EDO78070.1| Acetyl-CoA synthetase [Giardia lamblia ATCC 50803]
          Length = 726

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 82/244 (33%), Gaps = 50/244 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            +   Y V   K  + ++   A +  K +  P+   +V  QI            +     
Sbjct: 506 EIFTLYGVNAPKTKLATNEAEAATFAKEVTFPVVMKIVSPQI------------IHKSDC 553

Query: 68  GGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-----ELYLS 121
           GGV++   +     +  +EI+ +     + GP G+ +  V ++   D  +     E+ + 
Sbjct: 554 GGVKLNIKTEAEATAAFKEIMAN---AAKNGPKGAVLKGVEIQQMVDFSKYQKTTEMIVG 610

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D  +     +   QGG+        Y   I  +  D       ED  +         
Sbjct: 611 VNRD-PTWGPMIMV-GQGGI--------YANYIKDVAFDLAYKYDREDAEAQLKKTKIYE 660

Query: 178 ------ELQGQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGR------LRVLDS 224
                            D    L +   D  +++ L++NPL++ +  +      +  +D 
Sbjct: 661 ILNGVRGQPRSDIKGLLDTMVKLAQLVNDFSEITELDMNPLLVFEEQKEGKNPGIAAVDV 720

Query: 225 KISF 228
           KI+ 
Sbjct: 721 KITL 724


>gi|307711247|ref|ZP_07647668.1| phosphoribosylamine--glycine ligase [Streptococcus mitis SK321]
 gi|307616898|gb|EFN96077.1| phosphoribosylamine--glycine ligase [Streptococcus mitis SK321]
          Length = 420

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 98/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLIMTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +E K+  +++      +G +V   G  +A    +KL
Sbjct: 304 DFAQNITDILEGKEPAITWTDKGVTLGVVVASNGYPLAYEKGVKL 348


>gi|85858899|ref|YP_461101.1| acetyl-CoA synthetase subunit beta [Syntrophus aciditrophicus SB]
 gi|85721990|gb|ABC76933.1| acetyl-CoA synthetase beta subunit [Syntrophus aciditrophicus SB]
          Length = 697

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 86/224 (38%), Gaps = 24/224 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A ALL  + + V++G +  +    + A   L  P  V+K        G+    +  +D 
Sbjct: 492 DALALLAAFGIHVSRGKIARNWKEIKEAADELSYP-LVLK------LSGEAFLHK--SDW 542

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G +    + K +    +   G         P        +V++     +EL + L +D 
Sbjct: 543 GGVMTGIRNKKELREAFQ---GMKEKVNDRNPAVKI--GFHVQEQVG-GKELLVGLKLDA 596

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             G    +A   GG+  E       + +     +    ++S  +  L     ++G+A +D
Sbjct: 597 QFGH--ILACGYGGIYTEVFKDVSRELVPVGRPEAEKMISSLKIYPLLK--GVRGEACVD 652

Query: 187 GGDLFPNLYKA-FCDK---DMSLLEINPLIIMKNGRLRVLDSKI 226
              L   L +  F      D+  L+INPL+   +G +  +D++I
Sbjct: 653 WEGLLETLERVSFLATEVPDIKELDINPLMADASGCV-AVDARI 695


>gi|282162870|ref|YP_003355255.1| carbamoyl-phosphate synthase large chain [Methanocella paludicola
           SANAE]
 gi|282155184|dbj|BAI60272.1| carbamoyl-phosphate synthase large chain [Methanocella paludicola
           SANAE]
          Length = 1084

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 65/216 (30%), Gaps = 49/216 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +      V +     +V  A + I  L  PL +  +    G                
Sbjct: 133 KHAMESIGEKVPRSFACHTVDEAVAVIDRLGLPLIIRSAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +++ V                 G   SR++ + VE+     +E    ++  R +
Sbjct: 178 GSGVAHTVQDVRHIAE-----------IGLNKSRIHQILVEESVLGWKEFEYEVM--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                       +D   +     + I   ++ P   ++  D          +   L ++G
Sbjct: 225 SDTCITICNMENIDP--MGIHTGESI---VVTPSQTLSDADHQTLRSAAIKIIRALGIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I           A+ D D  ++E+NP +   + 
Sbjct: 280 GCNIQF---------AWNDGDYRIVEVNPRVSRSSA 306


>gi|295695778|ref|YP_003589016.1| CoA-binding domain protein [Bacillus tusciae DSM 2912]
 gi|295411380|gb|ADG05872.1| CoA-binding domain protein [Bacillus tusciae DSM 2912]
          Length = 902

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 36/231 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L   + +P A G V ++   A +  + +  P+ V                 L     GG
Sbjct: 691 DLFTCFGLPWAGGRVAATPEEAAALAREIGFPVVV----------KMVSRTLLHKSEWGG 740

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V +  +    +    + +   L           ++   V+       EL + +  D   G
Sbjct: 741 VVLGLTDGEAVRAACQGIRERLAQAGRENE---LDGFLVQPMIQGGVELMVGVTTDPQFG 797

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------ELQGQ 182
               IA   GG+ +E +            + P   +T      +   +         +G 
Sbjct: 798 --PLIAFGLGGIYVEVLRD------VVFRVTP---LTDRGAREMVRGIRGYRLLEGYRGH 846

Query: 183 ARID---GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
           A  D     DL   L +   +  ++  L++NP++ ++ GR  R++D+++  
Sbjct: 847 AAADIPAVEDLLLRLSRMVEELPEVVELDLNPVMALEPGRGCRIVDARVRV 897


>gi|41353051|gb|AAS01147.1| AclB [uncultured prokaryote]
          Length = 108

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   DII    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADIIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRYKDDRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGAN 363
            ++ I G I     + K   GI++A      K  +    + +R  G N
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIINAFEKYADKPQEHKTKIYVRRGGPN 108


>gi|15600171|ref|NP_253665.1| hypothetical protein PA4978 [Pseudomonas aeruginosa PAO1]
 gi|107104077|ref|ZP_01367995.1| hypothetical protein PaerPA_01005150 [Pseudomonas aeruginosa PACS2]
 gi|218894075|ref|YP_002442944.1| putative acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
 gi|9951261|gb|AAG08363.1|AE004910_10 hypothetical protein PA4978 [Pseudomonas aeruginosa PAO1]
 gi|218774303|emb|CAW30120.1| putative acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 696

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  L+ + +P+ +G V+S+   A  A   L  P  V+K+   A           
Sbjct: 481 LDEWQSKQALKPFGLPLPQG-VLSTPGQAREAALDLGFP-LVLKAVSAAL---------P 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                GGV +    ++ +     +        +  P       V +E  A   L EL + 
Sbjct: 530 HKTEAGGVALGLRNEAALEAA--LFDMRESLARHAPQ-LVFERVLLERMAGAPLAELIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 587 VKREEGFGLALVIGA--GGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRP 644

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
                        + +  C+    LLE  +NPL+    G L  +D+ I  
Sbjct: 645 AVCMEALVAAIRAVAEFACEHAERLLELDVNPLLADAEGAL-AVDALIRL 693


>gi|268317551|ref|YP_003291270.1| carbamoyl-phosphate synthase, large subunit [Rhodothermus marinus
           DSM 4252]
 gi|262335085|gb|ACY48882.1| carbamoyl-phosphate synthase, large subunit [Rhodothermus marinus
           DSM 4252]
          Length = 946

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 17/89 (19%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E ++K  ALLR+  +P        +V  A    + +  P+ +  S +  G      
Sbjct: 671 MDLAEERSKFSALLRELEIPYPPYGAARTVAEAVEVAERIGYPILIRPSYVLGG------ 724

Query: 59  FKELPADSKGGVRVESSLKSVISDIREIL 87
                     G+R+  + + V   +R IL
Sbjct: 725 ---------QGMRIAINKEEVERYVRNIL 744



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 32/180 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+ +  +  A+     S+  A+  ++ L G   V++     GG G G           
Sbjct: 133 RDLMEQIGIDQARSRTARSLLEAKEILQELGGLPVVIRPSFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +++     +             G   S V+ V +E+     +E  L LL  R +
Sbjct: 182 ---IVWTMEEFDRKVTR-----------GLELSPVHQVLIEESVYGWKEYELELL--RDA 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                I        IE +          + + P   +T +    + D      ++     
Sbjct: 226 NDNVIIVCP-----IENLDPMGVHTGDSITVAPAQTLTDKQYQRMRDAAIKMMRSIGKFA 280


>gi|254238309|ref|ZP_04931632.1| hypothetical protein PACG_04442 [Pseudomonas aeruginosa C3719]
 gi|254244134|ref|ZP_04937456.1| hypothetical protein PA2G_04974 [Pseudomonas aeruginosa 2192]
 gi|126170240|gb|EAZ55751.1| hypothetical protein PACG_04442 [Pseudomonas aeruginosa C3719]
 gi|126197512|gb|EAZ61575.1| hypothetical protein PA2G_04974 [Pseudomonas aeruginosa 2192]
          Length = 696

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q+K  L+ + +P+ +G V+S+   A  A   L  P  V+K+   A           
Sbjct: 481 LDEWQSKQALKPFGLPLPQG-VLSTPGQAREAALDLGFP-LVLKAVSAAL---------P 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLS 121
                GGV +    ++ +     +        +  P       V +E  A   L EL + 
Sbjct: 530 HKTEAGGVALGLRNEAALEAA--LFDMRESLARHAPQ-LVFERVLLERMAGAPLAELIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  +   G+   I +  GG+ +E +       +          + S      L       
Sbjct: 587 VKREEGFGLALVIGA--GGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRP 644

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
                        + +  C+    LLE  +NPL+    G L  +D+ I  
Sbjct: 645 AVCMEALVAAIRAVAEFACEHAERLLELDVNPLLADAEGAL-AVDALIRL 693


>gi|315612115|ref|ZP_07887031.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis ATCC
           49296]
 gi|315315778|gb|EFU63814.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis ATCC
           49296]
          Length = 421

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S+   A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSNFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  I    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAIEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|325971972|ref|YP_004248163.1| phosphoribosylamine--glycine ligase [Spirochaeta sp. Buddy]
 gi|324027210|gb|ADY13969.1| Phosphoribosylamine--glycine ligase [Spirochaeta sp. Buddy]
          Length = 440

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P     V +    A + ++  P P+ VVK+   A G+             
Sbjct: 106 AKAFMQRHQIPTPSYQVFTDYREAVTYLQRCPVPV-VVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +    ++    ++++    ++  Q G +G  V    +E+      E+ L +  D  
Sbjct: 152 -GVVIAFDRETACEAVQQM----MVNNQFGTSGQTV---VIEEYVSGA-EVSLLVFSDGN 202

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 203 TAKPMVSA 210


>gi|182683023|ref|YP_001834770.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CGSP14]
 gi|182628357|gb|ACB89305.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CGSP14]
          Length = 420

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVADTVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|41353053|gb|AAS01148.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETIFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A +       ++   + +R  G N
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDSLKEVGTKIYVRRGGPN 110


>gi|41352995|gb|AAS01119.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 17/111 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPQ 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGAN 363
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPN 111


>gi|15606133|ref|NP_213510.1| phosphoribosylamine-glycine ligase [Aquifex aeolicus VF5]
 gi|7994663|sp|O66949|PUR2_AQUAE RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|159795596|pdb|2YW2|A Chain A, Crystal Structure Of Gar Synthetase From Aquifex Aeolicus
           In Complex With Atp
 gi|159795597|pdb|2YW2|B Chain B, Crystal Structure Of Gar Synthetase From Aquifex Aeolicus
           In Complex With Atp
 gi|159795671|pdb|2YYA|A Chain A, Crystal Structure Of Gar Synthetase From Aquifex Aeolicus
 gi|159795672|pdb|2YYA|B Chain B, Crystal Structure Of Gar Synthetase From Aquifex Aeolicus
 gi|2983317|gb|AAC06907.1| phosphoribosylamine-glycine ligase [Aquifex aeolicus VF5]
          Length = 424

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V +    A+  ++ +  P+ VVK+   A G+             
Sbjct: 106 AKTFMKKYGIPTARYEVFTDFEKAKEYVEKVGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            G  V  +++  I  +   L   +        G     V +E+  +     Y+ ++
Sbjct: 152 -GAVVCETVEKAIETLDRFLNKKIF-------GKSSERVVIEEFLEGEEASYIVMI 199


>gi|11498810|ref|NP_070039.1| hypothetical protein AF1211 [Archaeoglobus fulgidus DSM 4304]
 gi|2649370|gb|AAB90033.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 685

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 23/221 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKGG 69
           L  Y + VA   +  +V  A    +++  P+   VV   +            +     GG
Sbjct: 480 LEAYGIEVAPYGIARNVDEARDIAESIGYPVVLKVVSPDV------------VHKSDVGG 527

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V++      +     EIL +    +   P  +R+  V V+   D  +EL + +  D   G
Sbjct: 528 VKLNVGENDLEKAFFEILSNV---EGRMPK-ARIEGVLVQKMVDGGKELIVGMKRDPQFG 583

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGG 188
               +    GG+ +E +     +       +    V       +   L   +        
Sbjct: 584 -PMIMF-GMGGVYVEVLKDVSFRIAPITRREAHEMVREVKAYRILRGLRGEKPADIDAIA 641

Query: 189 DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           DL   + K   D  ++  +++NP+ + ++G   V+D ++  
Sbjct: 642 DLLLRVSKLSLDHPEVLEMDLNPVKVFESG-YAVVDFRMVL 681



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 32/167 (19%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +R   + E   V E     +   ++  +     GN+  + N  G  +   D    +G 
Sbjct: 262 AAFRQSGVIEASSVEELFDFALLLLKYRKA-----GNLAILTNSGGPGVMAADACDQFGV 316

Query: 292 APANF---------------------LDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
             ANF                     +D+ G A  ++ + + +I++ D +V  I++ I  
Sbjct: 317 PLANFNFETIRKLKEFLPAESNFYNPVDILGDASAERFSRSLQILSEDENVD-IVLTILT 375

Query: 331 GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLN 377
              + D      L A + V     +   + G +VD   R++  SG+ 
Sbjct: 376 PTAQMD-----FLKAAESVVGKNAVCCFMGGESVDESERILRSSGIP 417


>gi|34592279|gb|AAQ76336.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETIFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN-----IPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E         + + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDTGVRIYVRRGGPNY 111


>gi|78224100|ref|YP_385847.1| phosphoribosylamine--glycine ligase [Geobacter metallireducens
           GS-15]
 gi|78195355|gb|ABB33122.1| phosphoribosylamine--glycine ligase [Geobacter metallireducens
           GS-15]
          Length = 423

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY VP A   V + V  A + I  +  P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGVPTAAYDVFTEVDPAVAFIDKVGVPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S    ++ + ++L         G  G   + V +E+        +L+      
Sbjct: 152 -GVIIAQSRDEAVATVNDML----SGNAFGSAG---SRVVIEEFLVGEEASFLAFT---D 200

Query: 128 SGMVAFIASTQG 139
              +  +AS Q 
Sbjct: 201 GKQIIPLASAQD 212


>gi|24378576|ref|NP_720531.1| phosphoribosylamine--glycine ligase [Streptococcus mutans UA159]
 gi|24376428|gb|AAN57837.1|AE014857_1 putative phosphoribosylamine-glycine ligase; phosphoribosyl
           glycinamide synthetase (GARS) [Streptococcus mutans
           UA159]
          Length = 419

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEKAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|304939619|emb|CBH30826.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK-----INIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +     +++ + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEVYQEQLKSVDVKIYVRRGGPNY 111


>gi|260590035|ref|ZP_05855948.1| carbamoyl-phosphate synthase, large subunit [Blautia hansenii DSM
           20583]
 gi|260539547|gb|EEX20116.1| carbamoyl-phosphate synthase, large subunit [Blautia hansenii DSM
           20583]
          Length = 1065

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 43/203 (21%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +L + ++P  KG  + +   A+ A   L  P+ V  S +  G                G+
Sbjct: 674 ILEECHIPRPKGHTVYTAEEAKKAANELGYPVLVRPSYVLGG---------------QGM 718

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           ++  + + V   I     I     I       G  +    V DG DI   L   ++    
Sbjct: 719 QIAINDEDVEEYIGIINRIAQEHPILVDKYLQGKEIEVDAVCDGEDI---LIPGIMEHIE 775

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
              +        G  I         +  K  I        E    L   L + G   I  
Sbjct: 776 RAGI------HSGDSISVYPARTISETAKKTI-------EEYTRRLAKSLHVLGMINIQF 822

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                      C +++ ++E+NP
Sbjct: 823 ---------IVCGEEVYVIEVNP 836


>gi|171186084|ref|YP_001795003.1| hypothetical protein Tneu_1634 [Thermoproteus neutrophilus V24Sta]
 gi|170935296|gb|ACB40557.1| conserved hypothetical protein [Thermoproteus neutrophilus V24Sta]
          Length = 229

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 23/232 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRF 59
            + E +A +LL+ Y +PV     +     A  A + +  P+ V  +  QI          
Sbjct: 16  KLREDEALSLLKAYGIPVPDFAAVKGEEEAVEAAEQIGYPVAVKIISPQI---------- 65

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             +     GGV +  +    + +    LG  L           +  + ++       EL 
Sbjct: 66  --IHKTDVGGVVLGVADAQGVREACRKLGEVLKRVPYAE----LEGILIQKMVPRGVELI 119

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
              L D   G V       GG+  E       + +     D    V       L      
Sbjct: 120 AGALYDEIFGHVILFG--LGGIYTELYRDVAMRLVPLTEQDAWEVVREVRAYRLLTGFRG 177

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
           L  +      D+     +   D  ++   ++NP+I ++ GR   V+D++   
Sbjct: 178 LPPRDTAAVVDILTKFSRLLVDNPEIREADLNPIIALEEGRGAYVVDARFML 229


>gi|126658142|ref|ZP_01729293.1| phosphoribosylamine--glycine ligase [Cyanothece sp. CCY0110]
 gi|126620513|gb|EAZ91231.1| phosphoribosylamine--glycine ligase [Cyanothece sp. CCY0110]
          Length = 419

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 17/106 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+    + +A+G   +   AA++ I     P+ VVK+   A G+             
Sbjct: 108 AKKLMADAGIAIAQGETFTDAEAAKAYITQQGAPI-VVKADNLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDG 111
            GV V  +++   + + E++  G  LI  +    G  V+ + + DG
Sbjct: 154 -GVIVAQTVEEAKAAVDELMTTGFDLIVVEEYLQGEEVSILALTDG 198


>gi|239930316|ref|ZP_04687269.1| phosphoribosylamine--glycine ligase [Streptomyces ghanaensis ATCC
           14672]
 gi|291438661|ref|ZP_06578051.1| phosphoribosylamine-glycine ligase [Streptomyces ghanaensis ATCC
           14672]
 gi|291341556|gb|EFE68512.1| phosphoribosylamine-glycine ligase [Streptomyces ghanaensis ATCC
           14672]
          Length = 417

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++   A++A+     P YVVK    A G+             
Sbjct: 106 AKDVMAAAGVPTARSYVCTTPEEADAALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V + +++  +                        V VE+  D
Sbjct: 152 -GVVVTADIEAARAHAG-----------------VCERVVVEEYLD 179


>gi|296242080|ref|YP_003649567.1| acetyl-CoA synthetase subunit beta [Thermosphaera aggregans DSM
           11486]
 gi|296094664|gb|ADG90615.1| acetyl-CoA synthetase (ADP-forming) beta subunit ;branched-chain
           acyl-CoA synthetase (ADP-forming) beta subunit
           [Thermosphaera aggregans DSM 11486]
          Length = 239

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 88/238 (36%), Gaps = 22/238 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E +   LL  YN+PVA   V  S+    S  + L  P  V+K               
Sbjct: 18  KLLEDEVFDLLTAYNIPVAPYAVARSIDEVSSMAEKLGFP-LVIKV---------ISPDI 67

Query: 62  LPADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           +     GGVR+   S    +    EI+      +   P  +R+N   ++       E+ +
Sbjct: 68  IHKTDVGGVRLDIWSKHEALKAAEEIMEKV---RARNPQ-ARINGFLLQPMMPKGVEIII 123

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE--DVASLCDMLE 178
             L D   G V    +  GG+ +E V +D   ++  L +   + +  E    A L     
Sbjct: 124 GGLHDPVFGSVVMFGA--GGIFVE-VFRDVSFRVAPLSVKEALEMIDEVKTSAILNGYRA 180

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
                +    ++   + K   +  ++  +++NP+    + +  V+D +I       +R
Sbjct: 181 QPPVNKYSIAEIIVAVGKILEEHPEIESMDLNPVFAYPD-KAYVIDGRIILKKPTTFR 237


>gi|88601434|ref|YP_501612.1| carbamoyl phosphate synthase large subunit [Methanospirillum
           hungatei JF-1]
 gi|121723885|sp|Q2FLD9|CARB_METHJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|88186896|gb|ABD39893.1| carbamoyl-phosphate synthase large subunit [Methanospirillum
           hungatei JF-1]
          Length = 1056

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 44/214 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+ +   PV + V++SS+   E A   +  P  +  +    G                
Sbjct: 131 RDLMNRIGEPVPRSVIVSSLDQLEHAASVVGFPAIIRPAYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +L  +   +   LG +           R++ V +E+     +E+   ++  R +
Sbjct: 176 GGGIAYNLDELRRIVELGLGKS-----------RIHQVLIEESVAGWKEIEFEVM--RDA 222

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                       +D   +     + +    I    D    +       +   L++QG   
Sbjct: 223 NDTCITICGMENVDP--MGVHTGESVVVAPILTLRDDEFHLLRNAALKIIRALDVQGGCN 280

Query: 185 IDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNG 217
           I           AF  D +  ++E+NP +   + 
Sbjct: 281 IQF---------AFKGDDEYRVIEVNPRVSRSSA 305


>gi|218883837|ref|YP_002428219.1| phosphoribosylglycinamide formyltransferase 2 [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765453|gb|ACL10852.1| Phosphoribosylglycinamide formyltransferase 2 [Desulfurococcus
           kamchatkensis 1221n]
          Length = 418

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 29/123 (23%)

Query: 1   MN---IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           MN   + EY  K +     +P  +  +  S   A  A   +  P  ++K ++ + G G  
Sbjct: 121 MNRIILREYVVKEV----GLPTTRYAIAESPEEAFKACNEIGYPC-IIKPEMSSSGHGHV 175

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +                S   V     E +            G     V VE+  ++  E
Sbjct: 176 KITNG------------SFDQVRKAFEESIRH--------ARGRS-RRVLVEEYVELDAE 214

Query: 118 LYL 120
             +
Sbjct: 215 FTV 217


>gi|126649607|ref|ZP_01721848.1| phosphoribosylamine--glycine ligase [Bacillus sp. B14905]
 gi|126593932|gb|EAZ87855.1| phosphoribosylamine--glycine ligase [Bacillus sp. B14905]
          Length = 418

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A     +    A + IK    P+ V+K+   A G+             
Sbjct: 106 AKEVMNKYNIPTAAHQTFTVAEQAIAYIKEQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + K  I  +++++G+          G   + V +E+  D     ++S +    
Sbjct: 152 -GVVVAMTEKEAIEAVQDMIGNQRF-------GESSSRVVIEEFLDGEEFSFMSFVHKGQ 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 IY-PMVIA 210


>gi|241764821|ref|ZP_04762827.1| GCN5-related N-acetyltransferase [Acidovorax delafieldii 2AN]
 gi|241365653|gb|EER60373.1| GCN5-related N-acetyltransferase [Acidovorax delafieldii 2AN]
          Length = 896

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 28/238 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV K ++  S H A      +  P+  +K                
Sbjct: 481 LTEMESKTLLAAFHIPVTKTILARSAHEAMMIATQMGFPV-ALKID--------SPDISH 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D  G      +         +++             +R+N V V++ A     RE+ +
Sbjct: 532 KSDVGGVALNIHNGTGARDAYTDMVQRV----ARLQPDARINGVTVQNMARARRGREICI 587

Query: 121 SLLVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            L+ D   G         G M     D         Q + + LI+      S    +L +
Sbjct: 588 GLVTDDPFG-PVITFGAGGTMIELIDDRAMELPPLNQFLARRLIE-----RSRVAETLGE 641

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                   R     +   + +  C    +  ++INPLI+ +NG +  +D++I+ D  A
Sbjct: 642 WRGASAVDRDALEQVLLRVSEMVCALPQLREMDINPLIVDENGAV-AVDARIAIDHAA 698


>gi|34592239|gb|AAQ76316.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   + I    G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYANTIADLAGIEDLANYGEYSGGPTTAETRFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN-----IPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E         + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDTGVRIYVRRGGPNY 111


>gi|87118424|ref|ZP_01074323.1| acetyl-CoA synthetase, putative [Marinomonas sp. MED121]
 gi|86166058|gb|EAQ67324.1| acetyl-CoA synthetase, putative [Marinomonas sp. MED121]
          Length = 704

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 27/217 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y + +A      +      A++T+  P+ +  ++ H   +      +L  +S   V
Sbjct: 498 LLADYGIGIANPQEAHTQEDTLKAVETMTFPVVLKTAEPHIHHKSDVGGVKLNLNSSTEV 557

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
                      D+   LG                 V +E       EL   ++ D   G 
Sbjct: 558 S------EAYDDLANRLGY---------------RVTIEPMVGQGTELAFGMVNDPQFGP 596

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQGQARIDGGD 189
           +  + S  GG+ IE +            I+ +  + S      L  +   +         
Sbjct: 597 MVMVGS--GGIYIEVLKDRVFSLAPFDEIEAMAMIDSLRTRPLLAGVRGAKAADLNQLAK 654

Query: 190 LFPNLYKAFCDK--DMSLLEINPLIIMKNGRLRVLDS 224
              N      D   D+S +++NP+I+   G +  +D+
Sbjct: 655 QLANFSHLAADLGDDISEIDVNPIIVNDKGSI-AVDA 690


>gi|325262943|ref|ZP_08129679.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. D5]
 gi|324032037|gb|EGB93316.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. D5]
          Length = 1067

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 59/201 (29%), Gaps = 36/201 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEECQIPRPTGGTVFTAEEAKEVANRLGYPVLVRPSYVL-GGQGMQIAIND------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 +   I  I  I     I       G  +    V DG DI   L   ++      
Sbjct: 725 ----HDIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGEDI---LIPGIMEHIERA 777

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            +        G  I         +  K  I       +E    L   L++ G   I    
Sbjct: 778 GI------HSGDSISVYPAQSLSEAAKDKI-------AEYTRRLAKSLQVIGLINIQFI- 823

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                     D+D+ ++E+NP
Sbjct: 824 -------VCGDEDVYVIEVNP 837


>gi|304939657|emb|CBH30845.1| ATP citrate lyase [uncultured bacterium]
 gi|327410171|emb|CBW37625.1| ATP citrate lyase beta subunit [uncultured bacterium]
          Length = 111

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       ++ + + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGVKIYVRRGGPNY 111


>gi|296086828|emb|CBI32977.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY +P AK    +   AA+  I+    P+ V+K+   A G+              
Sbjct: 200 KNLCDKYGIPTAKYQTFTDPAAAKQYIQEQGAPI-VIKADGLAAGK-------------- 244

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L      +  +L    +    G  G   + V VE+  +     + +L+
Sbjct: 245 GVIVAMTLDEAYEAVDLML----VKGAFGSAG---SQVIVEEFLEGEEASFFALV 292


>gi|224824771|ref|ZP_03697878.1| GCN5-related N-acetyltransferase [Lutiella nitroferrum 2002]
 gi|224603264|gb|EEG09440.1| GCN5-related N-acetyltransferase [Lutiella nitroferrum 2002]
          Length = 893

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 87/235 (37%), Gaps = 30/235 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  +N+PV    +      A    +    P+ V+K               +
Sbjct: 489 LSERESKEVLSAFNIPVNPTRLARDSDEAVRLAEETGYPV-VLKID---------SPDII 538

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD--ILRELYL 120
                GGV +  S  + + +    +      +Q  P  + ++ V V+        RE+ +
Sbjct: 539 YKSDVGGVELNISSAAALREAFASIVER--CRQARPE-AAISGVSVQPMRSRRFAREVMV 595

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQK--IFKLLIDPLIGVTSEDVASLCDMLE 178
            +  D  +          GG+ +E +         +   L++ LIG T      +  +L 
Sbjct: 596 GVTHD-NAFGPVITF-GAGGIAVEVMNDRALALPPLNHYLVESLIGKT-----RIGQILG 648

Query: 179 ----LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
               L         ++   + +  C+  ++  ++INPL+  + G +  LD++I  
Sbjct: 649 PFKNLPAIDIDQLKEVLLRVSEMICELPEIREMDINPLLADEQG-VMALDARIIV 702


>gi|168043807|ref|XP_001774375.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674367|gb|EDQ60877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 459

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 26/169 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY +P AK    +    A++ IK    P+ VVK+   A G+              
Sbjct: 132 KRLCDKYEIPTAKYQSFTDAEKAKTYIKEQGAPI-VVKADGLAAGK-------------- 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +  +L    ++ + G  G  V    VE+  D     + +++ D  +
Sbjct: 177 GVVVAMTLEEAYAAVDSML----VSSEFGSAGGLV---LVEEFLDGEEVSFFAIV-DGEN 228

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +   +AS Q    + +     P         P   ++ E    + + +
Sbjct: 229 AVP--MASAQDHKRVGD-GDTGPNTGGMGAYSPAPALSPELERKVMETI 274


>gi|119387718|ref|YP_918752.1| CoA-binding domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119378293|gb|ABL73056.1| CoA-binding domain protein [Paracoccus denitrificans PD1222]
          Length = 705

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 72/217 (33%), Gaps = 32/217 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           E ++K LL +Y +      + +S   A + +  +  P    VV   I            +
Sbjct: 4   EIESKELLARYGIETTLPELATSPDDAHAIVSRIGAPCALKVVSPDI------------V 51

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGVR+  +        R I+ +   +  +      +  V VE+      E+++  
Sbjct: 52  HKVDAGGVRLSVAADGAGDAWRSIMDACRASHPSAH----IEGVLVEEMVPAGLEVFIGG 107

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +D   G V    +  GG  +E+  K            PL       +          G 
Sbjct: 108 RIDPDYGPVVLFGA--GGSGVEQRGKPVAALA------PLTEAQGRAMVDAAFPAPFAGG 159

Query: 183 ARIDGGDLFPNLYK------AFCDKDMSLLEINPLII 213
                  L   L           +++++ L+INP+I+
Sbjct: 160 DAAGRAALTRCLMAVGGPDGMLLNEEIAELDINPIIL 196


>gi|323097777|emb|CBJ19314.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        DS  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREPDSKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYAEKMKAVDLKIYVRRGGPNY 111


>gi|85539383|emb|CAJ57307.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADQMKDVGTRIYVRRGGPNY 112


>gi|327390465|gb|EGE88805.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA04375]
          Length = 420

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKKIMVKYGVPTATYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|309800723|ref|ZP_07694860.1| phosphoribosylamine--glycine ligase [Streptococcus infantis SK1302]
 gi|308115644|gb|EFO53183.1| phosphoribosylamine--glycine ligase [Streptococcus infantis SK1302]
          Length = 421

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 99/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRTYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIQEGRPYLGVLYAGLILTTDGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  ++ K+ N+++      +G +V   G  +A    ++L
Sbjct: 304 DFAKNITDILDGKEPNITWTDKGVTLGVVVASNGYPLAYEKGVEL 348


>gi|294497104|ref|YP_003560804.1| phosphoribosylamine--glycine ligase [Bacillus megaterium QM B1551]
 gi|294347041|gb|ADE67370.1| phosphoribosylamine--glycine ligase [Bacillus megaterium QM B1551]
          Length = 424

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A     +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKELMKKYDIPTAAYETFTSYEEAKAYVEKQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +  +R+ L      + +         V VE+  D   E  L   V  T
Sbjct: 152 -GVTVALTVEEAVDTLRDFLVDQKFKEASA-------KVVVEEFLD-GEEFSLMAFVRGT 202

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 203 NVYPMVIA 210


>gi|260655589|ref|ZP_05861077.1| phosphoribosylamine--glycine ligase [Jonquetella anthropi E3_33 E1]
 gi|260630037|gb|EEX48231.1| phosphoribosylamine--glycine ligase [Jonquetella anthropi E3_33 E1]
          Length = 428

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +R   VP A+ V+  S   AE+A+     P YVVK+   A G+             
Sbjct: 109 AKDFMRAAGVPTARSVLCRSTAEAEAALSQF-VPPYVVKATGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV VE  L   +S  R++L    +    G  G     V +E+G    REL + ++ D  
Sbjct: 155 -GVFVEPELSGALSACRQLLQDRTL----GAAG---EQVLIEEGLT-GRELSVMIVTDGK 205

Query: 128 SGMVA 132
           S  + 
Sbjct: 206 SWRLL 210


>gi|170079083|ref|YP_001735721.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. PCC
           7002]
 gi|169886752|gb|ACB00466.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
           7002]
          Length = 1090

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPV    + S++  A      +     +++     GG G G           
Sbjct: 133 KEAMARIGVPVCPSGIASTMEEAREVAIEIGSYPLIIRPAFTMGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +      +           +G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEYEKICK-----------SGLEASPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|85539393|emb|CAJ57312.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADRMKDVGTRIYVRRGGPNY 112


>gi|92114027|ref|YP_573955.1| CoA-binding [Chromohalobacter salexigens DSM 3043]
 gi|91797117|gb|ABE59256.1| CoA-binding protein [Chromohalobacter salexigens DSM 3043]
          Length = 915

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 19/244 (7%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            +L  Y +P A    +     A  A +TL GP+   +V +      R +    +L A   
Sbjct: 502 EVLAAYGIPAAPSQYVFGPEEAFRAAQTLDGPMALKIVHAHNCVPFRYRKHPHKLSAGLL 561

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +    + + V   +R +           P  S               +  + +  D  
Sbjct: 562 QDLE---TPEQVADGVRRLGDKVREKFPESPIFSYCLQRM--QRGKASMQFCVGITRDPV 616

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLELQGQARI 185
            G    +    GG  I  V  D    +  L +     +   +     + +      +   
Sbjct: 617 FG-PVILF-GIGGYKIN-VLADRHVALPPLNMTLARELVSRTHAYRLIREHAADPERDIE 673

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH---LDIQE 241
               L   L +   D  ++  LE+NPL++ ++G +  +D   + D  A  RH      +E
Sbjct: 674 RLCQLLVKLSQMASDLPELQGLELNPLLLNRDG-VVAVD--FAMDLGAPARHAIMPYPEE 730

Query: 242 LRDV 245
           LR+ 
Sbjct: 731 LREW 734



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 22/81 (27%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPA----------------------NFLDVGGGADQ 305
            +  + NG G A+  +D + + GG  A                      N +D+GG A  
Sbjct: 305 RLAIVSNGLGPALLAIDKLVMAGGKLAELTAATRDALIAGEFDVSMPGRNPVDLGGNASP 364

Query: 306 DKVAAAFKIITSDSSVKGILI 326
           ++   A +I+ +D+ V  +L+
Sbjct: 365 ERFVEALEIVAADTQVDAVLV 385


>gi|53803445|ref|YP_114834.1| acetyltransferase [Methylococcus capsulatus str. Bath]
 gi|53757206|gb|AAU91497.1| acetyltransferase, GNAT family [Methylococcus capsulatus str. Bath]
          Length = 892

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 32/236 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +A+L  + +P+   +   S + A +A + L  P+ +   ++ +            +D  G
Sbjct: 496 RAILGAFRIPMLPALPAHSPNEALAAAECLGFPVAL---KVLSPD------ITHKSDVDG 546

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD--ILRELYLSLLVDR 126
            +   +  +SV     E+L             +R+  V VE        REL + ++ D 
Sbjct: 547 VMLNVTHAESVRQAYNELLARV----GRRKPDARIEGVSVEKMYTGRHGRELLVGVIDDP 602

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE----LQGQ 182
             G    I    GG  +E       + I    ++  I  T      +   L     L   
Sbjct: 603 VFG--PVIGFGAGGTAVE---ISRDRAIGLPPVNAHIARTLIGQTRISAALGAFRNLPPI 657

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                      + +  C+   +  ++INPL+  + G +  LD++I        RH 
Sbjct: 658 HMEALVQTLQRVSEMVCELPQIREMDINPLMADETG-VYALDARIVV------RHP 706


>gi|87303373|ref|ZP_01086161.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
           5701]
 gi|87282021|gb|EAQ73983.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
           5701]
          Length = 1101

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS+  AE   + +     +++     GG G G           
Sbjct: 133 KEAMERIGVAVCPSGIASSLEEAERVGEEIGTYPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFQAFCK-----------SGLEASPVSQILIEQSLIGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|329908056|ref|ZP_08274816.1| Protein acetyltransferase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546789|gb|EGF31723.1| Protein acetyltransferase [Oxalobacteraceae bacterium IMCC9480]
          Length = 881

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 73/232 (31%), Gaps = 36/232 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADS 66
           K +L  Y +PV +    ++V  A    + +  P+   ++  QI                 
Sbjct: 489 KIILAAYGIPVVETSTAATVDEAVLQAQRIGFPVAIKILSPQI------------WHKSD 536

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT--GSRVNCVYVEDGADILRELYLSLLV 124
            GGV ++      +      +   L   Q      G  V  +          EL + +  
Sbjct: 537 VGGVALDLEDADAVRHAARAMHKRLCELQPDAELQGFAVQAM---ARRPQAHELIVGVST 593

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D   G V      QGG+ +E +          + + PL  V + D          L    
Sbjct: 594 DPVFGPVILFG--QGGIAVEVLDDHA------VGLPPLNSVLAGDMIARTRVARLLAGYR 645

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                           +     D  ++  L+INPL+   +G +  LD+++  
Sbjct: 646 NRPAADLEAINRTLIQISSLVEDLPELVELDINPLLADGHG-VIALDARMRV 696


>gi|307152668|ref|YP_003888052.1| cyanophycin synthetase [Cyanothece sp. PCC 7822]
 gi|306982896|gb|ADN14777.1| cyanophycin synthetase [Cyanothece sp. PCC 7822]
          Length = 879

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +PV KG VI  +   E AIK + G   V+K     G  G+G   ++ +  + 
Sbjct: 224 KTILQDAGIPVPKGTVIQYLDELEEAIKDVGGYPIVIKP--LDGNHGRGITIDINSWEQA 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
                   +           +  +  +    GS  + + V
Sbjct: 282 --------EEAYDLASAASKNRSVIIERYYKGSD-HRILV 312


>gi|225387905|ref|ZP_03757669.1| hypothetical protein CLOSTASPAR_01675 [Clostridium asparagiforme
           DSM 15981]
 gi|225045990|gb|EEG56236.1| hypothetical protein CLOSTASPAR_01675 [Clostridium asparagiforme
           DSM 15981]
          Length = 839

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 61/201 (30%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L + ++P   G  + +   A+ A   L  P+ V  S +  G                 
Sbjct: 445 AILEQCDIPRPAGHTVFTAEEAKKAANDLGYPVLVRPSYVLGG------------QGMQI 492

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
              +  +   I  I +I     I       G  +    + DG DI   L   ++      
Sbjct: 493 AICDEDIDEFIGIINQIAQEHPILVDKYIMGKEIEVDAICDGTDI---LIPGIMQHIERT 549

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            +        G  I          I +  +D L+  T      L   L ++G   I    
Sbjct: 550 GI------HSGDSISVYPAQD---ITQKNVDTLVEYTE----KLARALHVKGMINIQF-- 594

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                       D+ ++E+NP
Sbjct: 595 -------IVDGDDVYIIEVNP 608


>gi|295702469|ref|YP_003595544.1| phosphoribosylamine--glycine ligase [Bacillus megaterium DSM 319]
 gi|294800128|gb|ADF37194.1| phosphoribosylamine--glycine ligase [Bacillus megaterium DSM 319]
          Length = 424

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A     +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKELMKKYDIPTAAYETFTSYEEAKAYVEKQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +  +R+ L      + +         V VE+  D   E  L   V  T
Sbjct: 152 -GVTVALTVEEAVDTLRDFLVDQKFKEASA-------KVVVEEFLD-GEEFSLMAFVRGT 202

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 203 NVYPMVIA 210


>gi|242398140|ref|YP_002993564.1| Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha
           [Thermococcus sibiricus MM 739]
 gi|242264533|gb|ACS89215.1| Acetyl-CoA synthetase II (ACSII, ADP-forming), subunit alpha
           [Thermococcus sibiricus MM 739]
          Length = 457

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 27/135 (20%)

Query: 269 IGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDK 307
           +  M N  G  + T D +   G   A                     N +D+   A  + 
Sbjct: 299 VAIMTNAGGPGVLTADQLDKRGLKLADLKEETMERLREFLPPMAAVKNPVDMIASARGED 358

Query: 308 VAAAFKIITSDSSVKGIL----INIFGGIMRCDVLVKGILSAVKEVKINIPLVMR-LEGA 362
                K++  D +V  ++    +  F G+   +   +GI  AVKEV    P++   + G 
Sbjct: 359 YYKTAKLLLEDENVDMLVTICVVPTFAGMTPTEH-AEGIARAVKEVNNRKPVLALFMAGY 417

Query: 363 NVDIGNRLIAESGLN 377
             +    L+ + G+ 
Sbjct: 418 VSEKARELLEKEGIP 432


>gi|308172538|ref|YP_003919243.1| phosphoribosylglycinamide synthetase [Bacillus amyloliquefaciens
           DSM 7]
 gi|307605402|emb|CBI41773.1| phosphoribosylglycinamide synthetase [Bacillus amyloliquefaciens
           DSM 7]
          Length = 422

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 70/229 (30%), Gaps = 38/229 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMKKYGIPTAEYETFTSFEEAKAYVQQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAMTEEEAIECLHDFL-------EDEKFGEASASVVIEEFL-AGEEFSLMAFVKGE 202

Query: 128 SGMVAFIASTQ-----GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +     IA        G              +  +  D +       V      +     
Sbjct: 203 TVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPHISDDIVKSAVETIVKPAAKAM----- 257

Query: 183 ARIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
              +G      LY      +    ++E N        ++ V   ++  D
Sbjct: 258 -VKEGRSFTGVLYAGLILTENGSKVIEFNARFGDPETQVVV--PRMESD 303


>gi|56479337|ref|YP_160926.1| acyl-CoA synthetase (ADP forming) [Aromatoleum aromaticum EbN1]
 gi|56315380|emb|CAI10025.1| Acyl-CoA synthetase (ADP forming) [Aromatoleum aromaticum EbN1]
          Length = 895

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 22/229 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KALL  + +P+A+ VV  S   A    + +  P+ V+K    +            ADS
Sbjct: 495 ESKALLAAFRIPIAQTVVARSATEAMVLAQEIGLPV-VMKIDSPS--------IIHKADS 545

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLV 124
            G      SL +V +  +EIL      K T      +N V +E        REL + +  
Sbjct: 546 GGVRLNLGSLAAVRTAYQEILEEVRKNKPTA----TINGVAIEPMILKRNGRELVVGVKR 601

Query: 125 DRTSGMVAFIASTQGG--MDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           D   G         G   +   ++    P     L+ D +   +S     L +   +   
Sbjct: 602 DAVFG-PVITFGEGGDRVVANRDMEIALPPLNHYLVRDLIK--SSRVSVLLGEFRTMPAV 658

Query: 183 ARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
                  +   + +  C+   ++ LEINPLI+ +NG +  +D++++ ++
Sbjct: 659 KMESLEFVLLRVSEMVCELPWITELEINPLIVDENGAV-AVDARVTVEN 706


>gi|327488709|gb|EGF20509.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK1058]
          Length = 419

 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEATHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|323097763|emb|CBJ18443.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMAREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYAEKMKAVDLKIYVRRGGPNY 111


>gi|317151925|ref|YP_004119973.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942176|gb|ADU61227.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 901

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 73/240 (30%), Gaps = 38/240 (15%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E +AK  L  Y +PV +  +  S   A  A   L  P+ +         + +     
Sbjct: 493 SLTEPEAKDTLAAYGIPVVETRIARSAKEAVIAADELGYPVAI---------KLRSPQIP 543

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYL 120
            P D  G +    + + V      IL      +      G  V  +          EL +
Sbjct: 544 QPFDMGGVLLDLETPERVWEGAASILARATRERPDAYIEGFTVQKM---GRRPGAHELAV 600

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKD-----------YPQKIFKLLIDPLIGVTSED 169
           S  VD   G V       GGM  E +                + + +  I  L+  T   
Sbjct: 601 SAEVDPVFGPVLLFG--HGGMAREMIQDTALTLPPLSMSLARELVGRTRISALLKGTPSH 658

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                           D       L +   D   ++ ++INPL     G +  L  KI+ 
Sbjct: 659 ----------PPADIDDISLTLIQLSQLIVDVPQIASIDINPLYADSEG-VLALGGKITI 707


>gi|224419109|ref|ZP_03657115.1| carbamoyl phosphate synthase large subunit [Helicobacter canadensis
           MIT 98-5491]
          Length = 441

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + K     ++  A  A K +  PL +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKSRYAYTIEEALEAAKEIGFPLIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++    +             Q G   S ++ + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIDEFKTLA-----------QNGLDTSPISEILIEESLLGWKEFEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ++   +           IE +          + I P + +T ++   + D 
Sbjct: 222 KSDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 265


>gi|34592263|gb|AAQ76328.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 107

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 14/107 (13%)

Query: 272 MVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKGIL 325
           MV G G ++   D I  + G    AN+ +  GG    +        F ++T     +G +
Sbjct: 1   MVAGGGASVVYADTIADFAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRHKDPRGKI 60

Query: 326 INIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGANV 364
           + I G I     + K   GI++A ++    +      + +R  G N 
Sbjct: 61  LIIGGAIANFTDVAKTFTGIINAFEKYADKLKEHGTKIYVRRGGPNY 107


>gi|32267187|ref|NP_861219.1| carbamoyl phosphate synthase large subunit [Helicobacter hepaticus
           ATCC 51449]
 gi|32263240|gb|AAP78285.1| carbamoylphosphate synthase [Helicobacter hepaticus ATCC 51449]
          Length = 1117

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + K     +   A  A K +  PL +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKSRYAYTEKEALEAAKEIGFPLIIRASYTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++       +            G   S +N + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIDEFKVVAKN-----------GLETSPINEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           +    +           IE +          + I P + +T ++   + D 
Sbjct: 222 KNDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 265


>gi|291195933|gb|ADD84680.1| PurD [Bacillus amyloliquefaciens]
 gi|328552302|gb|AEB22794.1| phosphoribosylamine--glycine ligase [Bacillus amyloliquefaciens
           TA208]
 gi|328910646|gb|AEB62242.1| phosphoribosylglycinamide synthetase [Bacillus amyloliquefaciens
           LL3]
          Length = 422

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 70/229 (30%), Gaps = 38/229 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMKKYGIPTAEYETFTSFEEAKAYVQQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAMTEEEAIECLHDFL-------EDEKFGEASASVVIEEFL-AGEEFSLMAFVKGE 202

Query: 128 SGMVAFIASTQ-----GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +     IA        G              +  +  D +       V      +     
Sbjct: 203 TVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPHISDDIVKSAVETIVKPAAKAM----- 257

Query: 183 ARIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
              +G      LY      +    ++E N        ++ V   ++  D
Sbjct: 258 -VKEGRSFTGVLYAGLILTENGSKVIEFNARFGDPETQVVV--PRMESD 303


>gi|304939625|emb|CBH30829.1| ATP citrate lyase [uncultured bacterium]
 gi|304939643|emb|CBH30838.1| ATP citrate lyase [uncultured bacterium]
 gi|304939645|emb|CBH30839.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        DS  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLLDLMTREPDSKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYAEKMKAVDLKIYVRRGGPNY 111


>gi|304939603|emb|CBH30818.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       ++ + + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGVKIYVRRGGPNY 111


>gi|255536320|ref|YP_003096691.1| Cyanophycin synthase [Flavobacteriaceae bacterium 3519-10]
 gi|255342516|gb|ACU08629.1| Cyanophycin synthase [Flavobacteriaceae bacterium 3519-10]
          Length = 773

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 14/107 (13%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++ K LL +  +PV KGVV SS+     A++ L  PL +     H G             
Sbjct: 115 FETKLLLGQAGIPVPKGVVCSSLEELRGAVEDLGFPLVLKPVDAHHG-----------KG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR---VNCVYVE 109
               +    + +   +  +      ++ K       R   VN   V 
Sbjct: 164 VTINITDLKTAEEAFAHAQNYGSEIILEKYIEGADHRMLVVNGKLVA 210


>gi|187477731|ref|YP_785755.1| cyanophycin synthetase [Bordetella avium 197N]
 gi|115422317|emb|CAJ48841.1| cyanophycin synthetase [Bordetella avium 197N]
          Length = 870

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K++L    VPV +G ++ SV  A +A + +  P+ V+K   + G  G+G F  L    + 
Sbjct: 224 KSILETCGVPVPEGHLVDSVEQAWAAAERIGLPV-VIKP--YDGNHGRGVFTNLSTREEV 280

Query: 69  GVRVESSLKS 78
                 ++  
Sbjct: 281 ESAYAVAVDE 290


>gi|319956961|ref|YP_004168224.1| carbamoyl-phosphate synthase large subunit [Nitratifractor
           salsuginis DSM 16511]
 gi|319419365|gb|ADV46475.1| carbamoyl-phosphate synthase large subunit [Nitratifractor
           salsuginis DSM 16511]
          Length = 1089

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  ++K  + +       ++  A +A K +  PL +  S   AG             
Sbjct: 128 QAFKEAMQKIGMDLPISKYAYNMDEAIAAAKEIGFPLIIRASYTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++       +            G   S +N + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNMDEFKEIAKG-----------GLEASPINEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R    +           IE +          + + P + +T ++   + D 
Sbjct: 222 RADNCIIV-------CSIENLDPMGVHTGDSITVAPALTLTDKEYQRMRDA 265


>gi|253828045|ref|ZP_04870930.1| carbamoylphosphate synthetase large subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|253511451|gb|EES90110.1| carbamoylphosphate synthetase large subunit [Helicobacter
           canadensis MIT 98-5491]
          Length = 1092

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + K     ++  A  A K +  PL +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKSRYAYTIEEALEAAKEIGFPLIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++    +             Q G   S ++ + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIDEFKTLA-----------QNGLDTSPISEILIEESLLGWKEFEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ++   +           IE +          + I P + +T ++   + D 
Sbjct: 222 KSDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 265


>gi|34592265|gb|AAQ76329.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVXADTIADFAGIDDLANYGEYSGGPTTGETKFYAETILDLMTGEKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A ++       + + + +R  G N 
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGVKIYVRRGGPNY 111


>gi|89900109|ref|YP_522580.1| cyanophycin synthetase [Rhodoferax ferrireducens T118]
 gi|89344846|gb|ABD69049.1| Cyanophycin synthetase [Rhodoferax ferrireducens T118]
          Length = 722

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL+   VPV +G V++S   A  A + +  P+  +K      GRG     +   D + 
Sbjct: 224 KSLLQSCGVPVPQGQVVNSAQEAWEAAQDIGLPV-ALKPYDGNHGRGVSLDLKNQKDIEA 282

Query: 69  GVRVES 74
              +  
Sbjct: 283 AFLLAQ 288


>gi|291279578|ref|YP_003496413.1| phosphoribosylamine--glycine ligase [Deferribacter desulfuricans
           SSM1]
 gi|290754280|dbj|BAI80657.1| phosphoribosylamine--glycine ligase [Deferribacter desulfuricans
           SSM1]
          Length = 427

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    +P A+    S   AA+  ++    P+ VVK+   A G+             
Sbjct: 108 AKEIMFSAGIPTAEYKEFSEFDAAKKYVEEKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +++  IS ++EI     I K  G +G     V +E+  +     YL+  
Sbjct: 154 -GVTVAKTIEEAISALKEI----FIDKVFGKSG---EKVVIEEFLEGEEASYLAFT 201


>gi|312135243|ref|YP_004002581.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor owensensis
           OL]
 gi|311775294|gb|ADQ04781.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor owensensis
           OL]
          Length = 420

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V ++   A   +  +     VVK+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTNYEDAYKFVSQISQYPIVVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +  I      L   +  +  G  G   N V +ED   +  E+ + ++ D  
Sbjct: 152 -GVIIANTKQEAIEA----LNLIMKERVFGNAG---NKVVIEDYL-VGEEVSVFVVSDGK 202

Query: 128 SGMVAFIA 135
             +    A
Sbjct: 203 DIVPLTTA 210


>gi|312142595|ref|YP_003994041.1| carbamoyl-phosphate synthase, large subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311903246|gb|ADQ13687.1| carbamoyl-phosphate synthase, large subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 1068

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K +VP+ + +   SV  AE     L  P+ V  +    G                
Sbjct: 133 KEEMEKLDVPMPRSLPAYSVDEAEKIAHDLGYPVVVRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + +     L +++           +N V +E+     +EL L L+ D   
Sbjct: 178 GGGLVYNVEELRNIAENGLAASM-----------INQVLIEEAVIGWQELELELVRDDNG 226

Query: 129 GMVAF 133
             ++ 
Sbjct: 227 KKISI 231



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 40/194 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ K ++P  +  +  SV  A +  +++  PL +  S +  GGRG     E+  D K 
Sbjct: 671 RALMNKLDIPQPESDIAKSVEEAYAIAESIGYPLMLRPSYVL-GGRGM----EIVYDEKS 725

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             +  ++  + +S    IL    +                 D     +E +++ +++   
Sbjct: 726 LTKYINTAVAEVSAEHPILIDKFLEDALEAE---------VDALTDGKETFVAAVMEH-- 774

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQG 181
                         IEE           +   P I +T E +       A + + L++ G
Sbjct: 775 --------------IEEAGIHSGDSACAI---PSINITDEQLETIKDYSAKIAEGLDVVG 817

Query: 182 QARIDGGDLFPNLY 195
              I        +Y
Sbjct: 818 LMNIQFAIYEGKVY 831


>gi|225860093|ref|YP_002741602.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230497|ref|ZP_06964178.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255264|ref|ZP_06978850.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298501842|ref|YP_003723782.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225726605|gb|ACO22456.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237437|gb|ADI68568.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           TCH8431/19A]
          Length = 420

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAIYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGVIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|219664375|gb|ACL31225.1| pimeloyl-CoA synthetase [Rhodococcus sp. TFB]
          Length = 706

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY++  LL  Y +   + +   SV AA +A   + GP+ V         +      EL
Sbjct: 488 LSEYESVQLLASYGIACTQSIPADSVEAAVAAFDAVGGPVAVKLLSASVAHKSDLGVVEL 547

Query: 63  PADSKGGVRVE 73
             D+   V   
Sbjct: 548 GLDTPSAVARA 558


>gi|288959531|ref|YP_003449872.1| GCN5-related N-acetyltransferase [Azospirillum sp. B510]
 gi|288911839|dbj|BAI73328.1| GCN5-related N-acetyltransferase [Azospirillum sp. B510]
          Length = 898

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 34/237 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK +L  Y +PV +  V  +   A +A + + GP+  +K   H            
Sbjct: 490 LSEYEAKRVLAAYGIPVVETRVAETPEEAAAAARVIGGPI-ALKILSH---------DIT 539

Query: 63  PADSKGGVRVESS-LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELY 119
                GGV +  +  + V ++   +L              ++    V++ A      EL 
Sbjct: 540 HKSDVGGVALGLTGPEDVKAEAEAMLARVAALAPEA----KIEGFTVQEMAVRPDAYELI 595

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLE 178
           + +  +   G V      +GG+ +E V        + L + PL + + +E ++      +
Sbjct: 596 VGMTENEMFGPVLLFG--EGGIGVEVVED------YALALPPLNMKLAAEQMSRTRIHRQ 647

Query: 179 LQGQARIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           LQG       DL         + +   D  +++ ++INPL+   +G +  LD++I  
Sbjct: 648 LQGYRSRAAVDLDAVALTLNKVSQLVVDFPEIAEMDINPLLADADG-VTALDARIKV 703



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 38/218 (17%)

Query: 207 EINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALD 266
           E         G L V D+      +A++R   +  + D++E      +A     + + + 
Sbjct: 242 EAQEAAASHTGALAVSDAV----YDAVFRRAGVLRVNDLAELF----DAAGTLGTGVPIT 293

Query: 267 GN-IGCMVNGAGLAMATMDIIKLYGGAPA------------------------NFLDVGG 301
           G+ +  + NG G+ +   D +   GG  A                        N L +G 
Sbjct: 294 GDRLAILTNGGGMGVMATDKLIRAGGRLAALAHETQEALGKALGPQPGGAPFRNPLRIGA 353

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVM--R 358
            A   + A A   +  D++   +L+      +   + + + +   V+  K     V+   
Sbjct: 354 DATPKRYAEALNALMQDNANDAVLVLHCPSALTDSEAIAQAVAETVQANKARRHPVLTSW 413

Query: 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           +   +     +L A+S +         DA +  +H V+
Sbjct: 414 IGDQSAVEARKLFADSRIPTYNGPS--DAVRAFMHLVR 449


>gi|257094819|ref|YP_003168460.1| CoA-binding domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047343|gb|ACV36531.1| CoA-binding domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 896

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 93/240 (38%), Gaps = 32/240 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KA+LR + +PVA+ +V  +   +    + +  P+          G        L
Sbjct: 491 LSEMESKAILRAFRIPVAQTMVAHTPTESLLLAEQIGFPI----------GMKIDSPDIL 540

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED--GADILRELYL 120
                GGVR+  +        R      + T +     +R+N + +E        REL +
Sbjct: 541 HKSEVGGVRLNITNAPA---ARNAYHDIIETVKKRHPTARINGLSIEPYLARPNGRELMI 597

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------L 173
            +  D   G    I    GG ++E  +         + + PL    + D+ S       L
Sbjct: 598 GVSRDPIFG--PIITFGAGGTEVEVFSDRA------VALPPLNRFLARDLISSTRASKLL 649

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
            +   +         D+  ++ +  C+   +  L++NPLI+ +NG +   D++I  D  A
Sbjct: 650 GEFRNMPAVNLEALEDVLLHVSQMICELPWLQELDLNPLIVDENGAI-AADARIMIDHAA 708



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 73/221 (33%), Gaps = 34/221 (15%)

Query: 184 RIDGGDLFPNLYKAFCDKDMSLL----EINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239
             D       L  A   K + LL        L  ++        S I F+  A  R   +
Sbjct: 220 IRDARRFMSALRSAARIKPIVLLKAGRHAGGLAAVETHSGMAAGSDIVFE--AAVRRAGV 277

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAG------------------LAMA 281
             ++++ +       AK     +      +  + NG G                  L+ A
Sbjct: 278 VRVKNIGQLF---YAAKALASKFRPQGKRLAIITNGGGPGAMAADRAGDLEIPLAELSTA 334

Query: 282 TMDIIKLYGG---APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDV 337
           T+  +        +  N +D+ G A   +   A   +  D+ V G+L+ +    + +   
Sbjct: 335 TIQTLNAAMPPTWSQRNPVDIEGDATPKRYYDAILAVAEDAEVDGVLVMLSPQAMTQPME 394

Query: 338 LVKGILSAVKEVKINIPLVMRLEG-ANVDIGNRLIAESGLN 377
           + K ++    ++    P++    G   V     L+ +SG+ 
Sbjct: 395 VAKAVIEV--DLLTAKPILTCWMGEDQVHEARALLEDSGIP 433


>gi|41353027|gb|AAS01135.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLLDLMTREPDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +        +++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFENYADKMKAVDLKIYVRRGGPNY 111


>gi|34592251|gb|AAQ76322.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 110

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 16/109 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIADLANYGEYSGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGA 362
           +  ++ I G I     + K   GI+ A +E       + + + +R  G 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGVKIYVRRGGP 109


>gi|308232405|ref|ZP_07415942.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu001]
 gi|308370213|ref|ZP_07420664.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu002]
 gi|308371297|ref|ZP_07424471.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu003]
 gi|308372487|ref|ZP_07428839.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu004]
 gi|308373693|ref|ZP_07433340.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu005]
 gi|308374828|ref|ZP_07437538.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu006]
 gi|308376056|ref|ZP_07445939.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu007]
 gi|308377288|ref|ZP_07441752.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu008]
 gi|308378255|ref|ZP_07482034.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu009]
 gi|308380636|ref|ZP_07490604.2| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu011]
 gi|308406109|ref|ZP_07669509.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu012]
 gi|308214146|gb|EFO73545.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu001]
 gi|308325077|gb|EFP13928.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu002]
 gi|308329298|gb|EFP18149.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu003]
 gi|308333129|gb|EFP21980.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu004]
 gi|308336816|gb|EFP25667.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu005]
 gi|308340650|gb|EFP29501.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu006]
 gi|308344383|gb|EFP33234.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu007]
 gi|308348387|gb|EFP37238.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu008]
 gi|308353224|gb|EFP42075.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu009]
 gi|308360965|gb|EFP49816.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu011]
 gi|308364505|gb|EFP53356.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu012]
          Length = 408

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 73/217 (33%), Gaps = 45/217 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    V V +   I      +     +  P+ VVK+ +  G  G+            GVR
Sbjct: 103 LAAAGVAVPRYAGIKDPDEIDVFAARVDAPI-VVKA-VRGGYDGR------------GVR 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +   +       RE L   +              V VE+  D+ RE  LS LV R     
Sbjct: 149 MARDVADARDFARECLADGV-------------AVLVEERVDLRRE--LSALVAR----- 188

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V          L+I P   +  +D+A+    L LQ    +    +
Sbjct: 189 ----SPFGQGAAWPVVQTVQRDGTCVLVIAPAPAL-PDDLATAAQRLALQLADELGVVGV 243

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSK 225
                + F   D +LL +N L +    +G   +  ++
Sbjct: 244 LA--VELFETTDGALL-VNELAMRPHNSGHWTIDGAR 277


>gi|306481123|emb|CBN08507.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKL--YGGAPANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I         AN+ +  GG   D+     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMVNVSELANYGEYSGGPTTDETRFYAETVFDLMTRHKDPKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A+++       + + + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQALEKYADKLKDVGVKIYVRRGGPNY 111


>gi|289555555|ref|ZP_06444765.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis KZN 605]
 gi|289440187|gb|EFD22680.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis KZN 605]
          Length = 428

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 73/217 (33%), Gaps = 45/217 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    V V +   I      +     +  P+ VVK+ +  G  G+            GVR
Sbjct: 123 LAAAGVAVPRYAGIKDPDEIDVFAARVDAPI-VVKA-VRGGYDGR------------GVR 168

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +   +       RE L   +              V VE+  D+ RE  LS LV R     
Sbjct: 169 MARDVADARDFARECLADGV-------------AVLVEERVDLRRE--LSALVAR----- 208

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V          L+I P   +  +D+A+    L LQ    +    +
Sbjct: 209 ----SPFGQGAAWPVVQTVQRDGTCVLVIAPAPAL-PDDLATAAQRLALQLADELGVVGV 263

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSK 225
                + F   D +LL +N L +    +G   +  ++
Sbjct: 264 LA--VELFETTDGALL-VNELAMRPHNSGHWTIDGAR 297


>gi|41352949|gb|AAS01096.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYADKMKAVDLKIYVRRGGPN 110


>gi|15610412|ref|NP_217793.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis H37Rv]
 gi|15842866|ref|NP_337903.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31794456|ref|NP_856949.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium bovis AF2122/97]
 gi|121639165|ref|YP_979389.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663139|ref|YP_001284662.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis H37Ra]
 gi|148824479|ref|YP_001289232.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis F11]
 gi|167968907|ref|ZP_02551184.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis H37Ra]
 gi|215405289|ref|ZP_03417470.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis 02_1987]
 gi|215413154|ref|ZP_03421855.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215428760|ref|ZP_03426679.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis T92]
 gi|215432241|ref|ZP_03430160.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis EAS054]
 gi|215447581|ref|ZP_03434333.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis T85]
 gi|219559336|ref|ZP_03538412.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis T17]
 gi|224991658|ref|YP_002646347.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800319|ref|YP_003033320.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis KZN 1435]
 gi|254233886|ref|ZP_04927211.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis C]
 gi|254365900|ref|ZP_04981945.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552378|ref|ZP_05142825.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188325|ref|ZP_05765799.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202438|ref|ZP_05769929.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis T46]
 gi|260206628|ref|ZP_05774119.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis K85]
 gi|289444859|ref|ZP_06434603.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Mycobacterium tuberculosis T46]
 gi|289448966|ref|ZP_06438710.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis CPHL_A]
 gi|289571504|ref|ZP_06451731.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis T17]
 gi|289575997|ref|ZP_06456224.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purk
           [Mycobacterium tuberculosis K85]
 gi|289747095|ref|ZP_06506473.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis 02_1987]
 gi|289751972|ref|ZP_06511350.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis T92]
 gi|289755400|ref|ZP_06514778.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis EAS054]
 gi|289759418|ref|ZP_06518796.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis T85]
 gi|294993783|ref|ZP_06799474.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis 210]
 gi|297635930|ref|ZP_06953710.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis KZN 4207]
 gi|297732927|ref|ZP_06962045.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis KZN R506]
 gi|298526752|ref|ZP_07014161.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306973725|ref|ZP_07486386.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu010]
 gi|313660259|ref|ZP_07817139.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis KZN V2475]
 gi|54038937|sp|P65899|PURK_MYCBO RecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase;
           Short=N5-CAIR synthase; AltName:
           Full=5-(carboxyamino)imidazole ribonucleotide synthetase
 gi|54041756|sp|P65898|PURK_MYCTU RecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase;
           Short=N5-CAIR synthase; AltName:
           Full=5-(carboxyamino)imidazole ribonucleotide synthetase
 gi|1877331|emb|CAB07079.1| PROBABLE PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE SUBUNIT
           PURK (AIR CARBOXYLASE) (AIRC) [Mycobacterium
           tuberculosis H37Rv]
 gi|13883197|gb|AAK47717.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31620052|emb|CAD95396.1| PROBABLE PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE SUBUNIT
           PURK (AIR CARBOXYLASE) (AIRC) [Mycobacterium bovis
           AF2122/97]
 gi|121494813|emb|CAL73294.1| Probable phosphoribosylaminoimidazole carboxylase atpase subunit
           purK [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599415|gb|EAY58519.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis C]
 gi|134151413|gb|EBA43458.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507291|gb|ABQ75100.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis H37Ra]
 gi|148723006|gb|ABR07631.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis F11]
 gi|224774773|dbj|BAH27579.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321823|gb|ACT26426.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417778|gb|EFD15018.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Mycobacterium tuberculosis T46]
 gi|289421924|gb|EFD19125.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis CPHL_A]
 gi|289540428|gb|EFD45006.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purk
           [Mycobacterium tuberculosis K85]
 gi|289545258|gb|EFD48906.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis T17]
 gi|289687623|gb|EFD55111.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis 02_1987]
 gi|289692559|gb|EFD59988.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis T92]
 gi|289695987|gb|EFD63416.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis EAS054]
 gi|289714982|gb|EFD78994.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis T85]
 gi|298496546|gb|EFI31840.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308356964|gb|EFP45815.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis SUMu010]
 gi|323718145|gb|EGB27327.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis CDC1551A]
 gi|326902496|gb|EGE49429.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis W-148]
 gi|328460054|gb|AEB05477.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis KZN 4207]
          Length = 429

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 73/217 (33%), Gaps = 45/217 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    V V +   I      +     +  P+ VVK+ +  G  G+            GVR
Sbjct: 124 LAAAGVAVPRYAGIKDPDEIDVFAARVDAPI-VVKA-VRGGYDGR------------GVR 169

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +   +       RE L   +              V VE+  D+ RE  LS LV R     
Sbjct: 170 MARDVADARDFARECLADGV-------------AVLVEERVDLRRE--LSALVAR----- 209

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V          L+I P   +  +D+A+    L LQ    +    +
Sbjct: 210 ----SPFGQGAAWPVVQTVQRDGTCVLVIAPAPAL-PDDLATAAQRLALQLADELGVVGV 264

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSK 225
                + F   D +LL +N L +    +G   +  ++
Sbjct: 265 LA--VELFETTDGALL-VNELAMRPHNSGHWTIDGAR 298


>gi|219667533|ref|YP_002457968.1| phosphoribosylamine/glycine ligase [Desulfitobacterium hafniense
           DCB-2]
 gi|219537793|gb|ACL19532.1| phosphoribosylamine/glycine ligase [Desulfitobacterium hafniense
           DCB-2]
          Length = 419

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 23/103 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V S    A+  IK +  P+ V+K+   A G+             
Sbjct: 106 AKEIMEAAGVPTAQSRVFSEPEQAKEYIKQMGAPI-VLKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V   L + ++ + E++  +L     G +G     + VE+
Sbjct: 152 -GVIVAMDLDTALTAVDELMDGSL-----GESGKL---LLVEE 185


>gi|281357004|ref|ZP_06243494.1| carbamoyl-phosphate synthase, large subunit [Victivallis vadensis
           ATCC BAA-548]
 gi|281316562|gb|EFB00586.1| carbamoyl-phosphate synthase, large subunit [Victivallis vadensis
           ATCC BAA-548]
          Length = 1069

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 70/233 (30%), Gaps = 33/233 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VP+AK     SV  AE     L  P+ V++     GG G G           
Sbjct: 133 KETMNRLGVPMAKSEPCYSVEEAEKIASELGYPV-VLRPAYTMGGTGGG----------- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +++ +   +   L ++L           V  V VE+ A    EL L ++ D   
Sbjct: 181 ---IVYNVEELREVVARGLAASL-----------VGQVLVEECALGWEELELEVVRDAKG 226

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          M +          +  +       +       + D + + G   +  
Sbjct: 227 NKITVCFIENVDPMGVHTGDSFCVAPMLTVPESVQKQLQDY-AYRIVDAVGVTGGTNVQF 285

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-----LDSKISFDDNALYR 235
                +      + +      + L     G         L + I+ D+   +R
Sbjct: 286 AHNREDGRIIVIEINPRTSRSSALASKATGFPIASVSTQLAAGITLDEMPYWR 338


>gi|327311766|ref|YP_004338663.1| carbamoyl phosphate synthase large subunit [Thermoproteus
           uzoniensis 768-20]
 gi|326948245|gb|AEA13351.1| carbamoyl phosphate synthase large subunit [Thermoproteus
           uzoniensis 768-20]
          Length = 1022

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 8   AKALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           ++ L     R+  VP+       S   A +A + L  P+ V
Sbjct: 124 SRELFQKAMREAGVPIPPSRSARSPDEALAAAEELGYPVMV 164


>gi|292670979|ref|ZP_06604405.1| phosphoribosylamine-glycine ligase [Selenomonas noxia ATCC 43541]
 gi|292647600|gb|EFF65572.1| phosphoribosylamine-glycine ligase [Selenomonas noxia ATCC 43541]
          Length = 433

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+  V +   AA + I++   P+ VVK+   A G+             
Sbjct: 117 AKDLMKKYGIPTARYEVFAEAEAARAYIRSEGTPI-VVKADGLAAGK------------- 162

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  +  I+         G  G+RV    +E+  +      L+   D T
Sbjct: 163 -GVVVAMTEQEALDAVDAIMEH----NSFGDAGARV---VIEEFMEGEEASLLAFT-DGT 213

Query: 128 SGMVAFIA 135
                  A
Sbjct: 214 VIRPMISA 221


>gi|328885501|emb|CCA58740.1| acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative
           [Streptomyces venezuelae ATCC 10712]
          Length = 714

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 74/225 (32%), Gaps = 33/225 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  + V KG +  S   A  A+  + G   V+K+ +            L     G
Sbjct: 482 KRLLAEAGIAVPKGRIAESAEDAVRAVTEVGGT-AVLKAVVPGL---------LHKTEAG 531

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +            G+     +    G     V VE+      EL + +    T 
Sbjct: 532 GVEIGVTTA----------GAPAAHARLAALGG---QVLVEELVGEGVELIVGV--HTTD 576

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL---IDPLIGVTSEDVASLCDMLELQGQARI 185
                 A   GG+  E +     + +        + L G+    V  L            
Sbjct: 577 LGPVLTAGL-GGIFTEVLDDVGHRLLPLAPGEGAELLAGLRGAKV--LAGARGRAAVDVA 633

Query: 186 DGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISFD 229
              +L   + +   D      L++NP+ ++  G + VLD+ +  +
Sbjct: 634 AAAELLHKVAELAQDWPAGYALDLNPVRVLPKGAV-VLDAALGIE 677


>gi|34592253|gb|AAQ76323.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETILDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +        + + + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFENYADKMKDVGVKIYVRRGGPNY 111


>gi|312863955|ref|ZP_07724192.1| phosphoribosylamine--glycine ligase [Streptococcus vestibularis
           F0396]
 gi|311100521|gb|EFQ58727.1| phosphoribosylamine--glycine ligase [Streptococcus vestibularis
           F0396]
          Length = 420

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVIVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|218133077|ref|ZP_03461881.1| hypothetical protein BACPEC_00939 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991950|gb|EEC57954.1| hypothetical protein BACPEC_00939 [Bacteroides pectinophilus ATCC
           43243]
          Length = 424

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +S   A+  ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYETFTSAEEAKKYLETSEYPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  +  + E+    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICQTKEEAMEGVNEL----MLDKKFGSAG---NTIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GSTIKIMSSAQD 212


>gi|145301075|ref|YP_001143916.1| acyl-CoA synthetase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853847|gb|ABO92168.1| acyl-CoA synthetase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 856

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 83/241 (34%), Gaps = 35/241 (14%)

Query: 175 DMLELQGQARIDGGDLFPNLYK--------AFCDK--DMSLLEINPLIIMKNGRLRVL-- 222
             + L     ID G L   L +         + DK  D            +N  + VL  
Sbjct: 178 AFISLGDHCDIDFGQLLDQLSRDGTTRAILLYMDKLHDARHFLSAARAASRNKPILVLKS 237

Query: 223 ---DSKISFDD--NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGA 276
              D     D+  +A  R   +  +RD + E    +E   H+L+   L G  +  + NG 
Sbjct: 238 GRHDPAKGLDNVYDAAIRRAGMLRVRD-THELFAAVETLSHSLT---LKGERLAIISNGR 293

Query: 277 GLAMATMDIIKLYGGAPAN-FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGG--IM 333
           GLA   +D++   GG  A    D+G  AD      A   +   +    IL+ I       
Sbjct: 294 GLANMAVDVLLERGGKLAIPPKDIGSDADITAYQQALDALLQGNEADAILL-IHAPSLTA 352

Query: 334 RCDVLVKGILSAVKEVKINIPLVMRLEGAN------VDIGNRLIAESGLNVITAIDLDDA 387
           R   L + ++  +++        +     N         G +L  E+G+      +   A
Sbjct: 353 RGAELARSLIDYLRQHPRARRFNIL---TNWAGEYSAQEGRKLFTEAGIPTYRTPESAVA 409

Query: 388 A 388
           A
Sbjct: 410 A 410


>gi|119025554|ref|YP_909399.1| carbamoyl-phosphate synthase large chain [Bifidobacterium
           adolescentis ATCC 15703]
 gi|167006436|sp|A1A0T4|CARB_BIFAA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|118765138|dbj|BAF39317.1| carbamoyl-phosphate synthase large chain [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 1126

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K ++   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKADMNAPRYGTALSLDEAREAAHAIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLRKYVDRAL--KEAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855


>gi|319790507|ref|YP_004152140.1| acetyl-CoA carboxylase, biotin carboxylase [Thermovibrio
           ammonificans HB-1]
 gi|317115009|gb|ADU97499.1| acetyl-CoA carboxylase, biotin carboxylase [Thermovibrio
           ammonificans HB-1]
          Length = 472

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L+++  VPVA+G    I+ +  A+   K +  P+ +  +    GGRG    +    
Sbjct: 117 ESKKLMKELGVPVAEGSEKPINDLQEAKEIAKKIGYPVMIKAAH-GGGGRG---LRVARN 172

Query: 65  DSKGGVRVESSLKSVISDIRE 85
           + +   + + ++K   +   +
Sbjct: 173 EKELETQFQIAVKEAEAAFGK 193


>gi|33591865|ref|NP_879509.1| acetyl-CoA synthetase [Bordetella pertussis Tohama I]
 gi|33571508|emb|CAE44998.1| acetyl-CoA synthetase [Bordetella pertussis Tohama I]
 gi|332381282|gb|AEE66129.1| acetyl-CoA synthetase [Bordetella pertussis CS]
          Length = 729

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 29/233 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGR 58
           M   E +AK L+R   +      +      A +    L  P+   +V  +I         
Sbjct: 493 MQYSETEAKRLVRSIGIQTLPERIAQDPAQAAAIATELGFPVALKIVSPEIL-------- 544

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                +D  G      +     S    ++    + +       R++ + +   A    +L
Sbjct: 545 ---HKSDVGGVQLAVQTADEARSVYTSMMAR--VRRNCPQA--RIDGIAIAPMARPGVDL 597

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG------VTSEDVAS 172
            L  + D T G    + S  GG+  E +A      I +   D          +    +  
Sbjct: 598 ILGCIQDPTFGPCLMLGS--GGVYTEILADAV---IRRAPFDAATARSMIAQLKGAPLLD 652

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
               +       +       ++Y     + +  LEINPL ++  G+ +  LD+
Sbjct: 653 GARGMPRADTDALAQAVAMLSVYAYANRRHIESLEINPLRVLPAGQGVVALDA 705


>gi|217970385|ref|YP_002355619.1| Cyanophycin synthase (L-arginine-adding) [Thauera sp. MZ1T]
 gi|217507712|gb|ACK54723.1| Cyanophycin synthase (L-arginine-adding) [Thauera sp. MZ1T]
          Length = 594

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR   +PV + VV+ S   A  A + L  P+ V  +      + +G   +        
Sbjct: 223 EVLRAAGLPVPQQVVVRSPEGAVEAARALGYPVVVKPA-----DQEQGAGVQAGLSDDAM 277

Query: 70  VRVESSLKSVIS 81
           VR+     S +S
Sbjct: 278 VRIAYDAASALS 289


>gi|170079000|ref|YP_001735638.1| cyanophycin synthetase [Synechococcus sp. PCC 7002]
 gi|169886669|gb|ACB00383.1| cyanophycin synthetase [Synechococcus sp. PCC 7002]
          Length = 897

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 3/105 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    VPV +G VI  +   E AI+ + G   V+K      GRG     +  AD++ 
Sbjct: 224 KNILADAGVPVPRGTVIRYLDDLEDAIEDVGGYPIVIKPLDGNHGRGITIDIKTWADAEH 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              + S      S I E        +     G  V    V +   
Sbjct: 284 AYDLASEASKTRSVIVERYYKGSDHRVLVINGKLVA---VSERVP 325


>gi|332525742|ref|ZP_08401889.1| cyanophycin synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109299|gb|EGJ10222.1| cyanophycin synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 861

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K LL    VPV +G  ++ +    +A   +  P+ VVK +    G+G        A  +
Sbjct: 208 SKRLLASAGVPVPRGRPVTDLEDGWAAAMEIGLPV-VVKPRDGNQGKGVTVNVTDRAQFE 266

Query: 68  GGVRVESSLKSVI 80
              R    +  V+
Sbjct: 267 AAYRTADEIGEVM 279


>gi|327410173|emb|CBW37626.1| ATP citrate lyase beta subunit [uncultured bacterium]
          Length = 111

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G   ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGENASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK-----INIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +E +     +++ + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDKLKAVDVKIYVRRGGPNY 111


>gi|291277025|ref|YP_003516797.1| carbamoyl-phosphate synthase large chain [Helicobacter mustelae
           12198]
 gi|290964219|emb|CBG40068.1| carbamoyl-phosphate synthase large chain [Helicobacter mustelae
           12198]
          Length = 1086

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 55/171 (32%), Gaps = 37/171 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + + +    K  + V K     +   A  A K +  P+ +  S   AG            
Sbjct: 127 RQIFKETMLKIGMDVPKSFYAYNEEQALEAAKAIGFPIIIRASFTLAG------------ 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG  V  +++   +  +            G   S +N + +E+     +E  + ++ 
Sbjct: 175 ---GGSGVAYNIEEFQALAKA-----------GLEASPINEILIEESLLGWKEYEMEVIR 220

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D+    +           IE +          + I P + +T ++   + D
Sbjct: 221 DKNDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRD 264


>gi|328885564|emb|CCA58803.1| acyl-CoA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 984

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 37/107 (34%), Gaps = 13/107 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           QA  LL +Y + V   +   +  AA SA   L  P+ +  +  H   R       L   S
Sbjct: 761 QAGELLARYGIAVLPTLPAPTPDAAVSAAARLGYPVALKTTAPHLRHRPDLGGVRLDLAS 820

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           +  +R         +++ E+LG              V    V  G D
Sbjct: 821 EEQLRA------AYAELTEVLGK-------PEELQPVVQAMVPRGVD 854


>gi|332670663|ref|YP_004453671.1| GCN5-like N-acetyltransferase [Cellulomonas fimi ATCC 484]
 gi|332339701|gb|AEE46284.1| GCN5-related N-acetyltransferase [Cellulomonas fimi ATCC 484]
          Length = 914

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 77/224 (34%), Gaps = 25/224 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL    V V     +     A +    +  P+  +K+ + A            AD  G 
Sbjct: 696 ALLAAVGVDVLPSYRVHDADEAVAVADRIGWPV-ALKTTVPAL--------RHRADLGGV 746

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
               +    + +D+ ++L   L     G  G  +    V+  A        S  V R+S 
Sbjct: 747 RLDVADETELRADVAQVL--ELAAAHHGGDGEPLE---VQAMAPHG-----SACVIRSSE 796

Query: 130 MVAF--IASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTSEDVA-SLCDMLELQGQARI 185
              F  I S     D  ++  D    +  L  +D    V S   A  L     L      
Sbjct: 797 DPLFGPIISFGLAGDASDLLGDVSYGVPPLTDVDVADLVRSARAAPRLFGYRGLPALDVA 856

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              D+   L     D  ++  LE+NP+++ + G + VL ++ + 
Sbjct: 857 ALEDVIARLAVLADDLPELRALELNPVVVSERGAV-VLGARATL 899


>gi|328953425|ref|YP_004370759.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328453749|gb|AEB09578.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 676

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 39/233 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A ALL K+ +PVA   + ++   A +       P+ +                      
Sbjct: 464 EAAALLAKHGIPVAACPLATTADEAVTLAAQFDSPVAL----------KIWSPDLPHKTD 513

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELYLSLLVD 125
            GGVR+  + +  I    + L  T +T        R++ V V   A     E+ L +L D
Sbjct: 514 VGGVRLNLTTEDEIRSECQDLVKTALTHVPWA---RIDGVTVSPMAKPGGMEVILGILTD 570

Query: 126 RTSGMVAFIASTQGGMDIEEV-----------AKDYPQKIFKLLIDPLIGVTSEDVASLC 174
              G         GG+  E              ++  + I  +   PL          L 
Sbjct: 571 PQYGSTLMFG--LGGVFTEIYRDVQFCLLPAADEELWELIRSIKGYPL----------LA 618

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                    +         L +       +  +E+NPL++ + G +  +D+++
Sbjct: 619 GARGFPPLDQEALLLTMKALARVATSNPQLDQIELNPLLVYERG-VFAVDARM 670


>gi|266621406|ref|ZP_06114341.1| carbamoyl-phosphate synthase, large subunit [Clostridium hathewayi
           DSM 13479]
 gi|288866920|gb|EFC99218.1| carbamoyl-phosphate synthase, large subunit [Clostridium hathewayi
           DSM 13479]
          Length = 1064

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+ A   L  P+ V  S +  G   +    +        
Sbjct: 673 KILEECRIPRPAGHTVFTAEEAKEAAHKLGYPVLVRPSYVLGGQGMQIAISD-------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   I  I +I     I       G  +    + DG DI
Sbjct: 725 ----QDVDEFIGIINQIAQEHPILVDKYIMGKEIEVDAICDGTDI 765


>gi|260431893|ref|ZP_05785864.1| CoA-binding domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415721|gb|EEX08980.1| CoA-binding domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 687

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 75/230 (32%), Gaps = 43/230 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK  L ++ + V + VV+      E   + L GPL V                  
Sbjct: 486 LTEAEAKQALAEHGLTVPRSVVV-PADQVEEVARHLTGPLAVK------------GVGLA 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G V +  +   +      I  + ++ ++    G              + EL + +
Sbjct: 533 HKSEHGAVLLGVTASEIADAALRIGTADVLVEEMAAGG--------------VAELLIGV 578

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D   G V  + +  GG+  E       +  F LL+      T   +  L     L G 
Sbjct: 579 TRDPAHGFVLTLGA--GGVLTE-----IQRDTFSLLVPSDRDATRAALGKLACAPLLAGY 631

Query: 183 ARIDGGDLFPNL--------YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
                 +L   L        Y       +S +EINPLI    G +  +D+
Sbjct: 632 RGKPAANLEAVLDAIEAVQSYVIANADTVSEVEINPLICTATGAV-AVDA 680


>gi|13475266|ref|NP_106830.1| putative carboxylase [Mesorhizobium loti MAFF303099]
 gi|14026017|dbj|BAB52616.1| putative carboxylase [Mesorhizobium loti MAFF303099]
          Length = 407

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 22/104 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VPV    + ++    ES    +  P+ ++K  +  G                
Sbjct: 114 RQLLAEAGVPVPSYRLAANAADIESYAAEIGLPV-ILKPAVGVG--------------SS 158

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GVR+  +   +      +LG   I + +         + VE+ A
Sbjct: 159 GVRLCRNGDELAEHTTYLLGGKHIWRSSP-------RILVEEFA 195


>gi|304939621|emb|CBH30827.1| ATP citrate lyase [uncultured bacterium]
          Length = 116

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 21/116 (18%)

Query: 270 GCMVNGAGLAMATMDIIKLY----GGAP---ANFLDVGGGADQDKVAAA----FKIITSD 318
             MV G G ++   D I  Y    GG     AN+ +  GG    +        F ++T  
Sbjct: 1   WTMVAGGGASVVYADTIADYAEATGGNISDLANYGEYSGGPTTGETKFYAQTLFDLMTRH 60

Query: 319 SSVKGI--LINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
              +G   ++ I G I     + K   GI+ A++E    +      + +R  G N 
Sbjct: 61  KDPEGRDKILIIGGAIANFTDVAKTFTGIIQALEEYAEKLKEHNTRIYVRRGGPNY 116


>gi|242309114|ref|ZP_04808269.1| carbamoyl phosphate synthase large subunit [Helicobacter pullorum
           MIT 98-5489]
 gi|239524155|gb|EEQ64021.1| carbamoyl phosphate synthase large subunit [Helicobacter pullorum
           MIT 98-5489]
          Length = 1088

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + K     ++  A  A K +  PL +  S   AG             
Sbjct: 132 QAFKEAMLKIGMDLPKSCYAYTLQEALEAAKEIGFPLIIRASFTLAG------------- 178

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++    +             Q G   S +N + +E+     +E  + ++ D
Sbjct: 179 --GGSGVAYNIDEFKALA-----------QNGLEVSPINEILIEESLLGWKEFEMEVIRD 225

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           ++   +           IE +          + I P + +T ++   + D 
Sbjct: 226 KSDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 269


>gi|154487011|ref|ZP_02028418.1| hypothetical protein BIFADO_00849 [Bifidobacterium adolescentis
           L2-32]
 gi|154084874|gb|EDN83919.1| hypothetical protein BIFADO_00849 [Bifidobacterium adolescentis
           L2-32]
          Length = 1126

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K ++   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKADMNAPRYGTALSLDEAREAAHAIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLRKYVDRAL--KEAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVEEAGAESARSDIAHSLEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +      +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEDELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R       +      +D   V       I    + P+  +T  +   L D+
Sbjct: 222 -RDKKDNVVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 267


>gi|33592810|ref|NP_880454.1| cyanophycin synthetase [Bordetella pertussis Tohama I]
 gi|33572458|emb|CAE42027.1| cyanophycin synthetase [Bordetella pertussis Tohama I]
 gi|332382223|gb|AEE67070.1| cyanophycin synthetase [Bordetella pertussis CS]
          Length = 857

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 232 KELLSTCGVPVPEGRLVQSAADAWEAAQDIGLPV-VVKP--YDGNHGRGVFTNLLTRDEI 288

Query: 69  GVRVESSLKS 78
                 ++  
Sbjct: 289 ESAYAVAVDE 298


>gi|148258919|ref|YP_001243504.1| putative Acetyl-CoA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146411092|gb|ABQ39598.1| putative Acetyl-CoA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 903

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 72/230 (31%), Gaps = 37/230 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L   Y +P+A     ++   AE A          V  +I +                GG
Sbjct: 498 ELFNAYAIPIAPTAFAATPEQAEKACAPFLTDGNKVAVKIVS-------RDITHKSDVGG 550

Query: 70  VRVE-SSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           VR+  SS   V     E+       + Q   TG  ++ + V       REL   +  D T
Sbjct: 551 VRLNLSSPMEVRRATEEMFVKVKAARPQARITGVSLHPMIVRPA---ARELIAGIADDET 607

Query: 128 SGMVAFIASTQGGMDIEEVAKD-----------YPQKIFKLLIDPLIGVTSEDVASLCDM 176
            G V      QGG  +E +                + I +  +             L   
Sbjct: 608 FGPVVLFG--QGGTAVEAINDKALALPPLDLKLAHELIERTHVS----------RLLRAH 655

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSK 225
             +      +   +   L +   D  ++  L+INPL+    G +  LD +
Sbjct: 656 RNVPQVNVNEVALVLVKLAQLVADVPEIRELDINPLLADDTG-VLALDGR 704



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 44/191 (23%)

Query: 231 NALYRH------LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD 284
           +A +R       LD+ EL D +E  SR                 +  + NG G  +  +D
Sbjct: 265 DAAFRRAGLLRVLDLGELFDAAETLSRVKTVAGK---------RLAILTNGGGAGVLAID 315

Query: 285 IIKLYGGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            +  +GG  A                     N +D+ G AD  +   A +I+ SDS+   
Sbjct: 316 RLLDFGGVAAELSEEVRARLDTVLPITWSKLNPVDIIGDADAVRYETALEILASDSANDA 375

Query: 324 ILI-NIFGGIMRCDVLVKGILSA----VKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
           +L+ N+   +         I+       K+  +  PL     GA  D+ + +   + +  
Sbjct: 376 VLVINVPTALASATDTANAIVRFNEKQQKKDGLPKPLFSVWLGAGRDV-SEIFDRARIPH 434

Query: 379 ITAIDLDDAAQ 389
                  DA +
Sbjct: 435 YPTET--DAVR 443


>gi|257095425|ref|YP_003169066.1| cyanophycin synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047949|gb|ACV37137.1| cyanophycin synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 860

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 11/87 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K LL    VPV  G  + S   A +A   +  P+ VVK Q   G +GKG    L    +
Sbjct: 208 SKVLLHAAGVPVPSGRPVLSAEDAWAAACEIGCPV-VVKPQ--DGNQGKGVAVNLATREQ 264

Query: 68  GGVRVESSLKSVISDIREILGSTLITK 94
                   +++  +   E+    L+ +
Sbjct: 265 --------IEAAYAIAFEVSDEVLVER 283


>gi|85539373|emb|CAJ57302.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRSGGPNY 112


>gi|323097765|emb|CBJ18444.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREPDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYAEKMKAVDLKIYVRRGGPNY 111


>gi|261340883|ref|ZP_05968741.1| acetyltransferase, GNAT family [Enterobacter cancerogenus ATCC
           35316]
 gi|288317315|gb|EFC56253.1| acetyltransferase, GNAT family [Enterobacter cancerogenus ATCC
           35316]
          Length = 887

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 77/247 (31%), Gaps = 35/247 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILGSYGIQTLPTWIASDSAEAVHIAEQLGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              +D +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSDVQGVMLYLRTAAEVQQAADAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-------VTSEDVAS 172
           + ++          +   +GG++        P++   + + PL         + +     
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLIIQAIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+             +     D  ++  L+I+PL+   N     LD  +    F
Sbjct: 639 IRGRSALRPLDIAGLSQFLVQVSNLIVDCAEIQRLDIHPLLASGN-EFTALDVTLDIAPF 697

Query: 229 DDNALYR 235
           D ++  R
Sbjct: 698 DGDSESR 704


>gi|331265479|ref|YP_004325109.1| phosphoribosylamine-glycine ligase [Streptococcus oralis Uo5]
 gi|326682151|emb|CBY99767.1| phosphoribosylamine-glycine ligase [Streptococcus oralis Uo5]
          Length = 421

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|322697946|gb|EFY89720.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Metarhizium acridum CQMa 102]
          Length = 1170

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+AK + +S+V  A  A + +  P+ V  +    G               
Sbjct: 219 AKAL-EEINIPIAKSIAVSTVDEALDAAEKVGYPIIVRAAYALGGL-------------- 263

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +EL   ++ D  
Sbjct: 264 -GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKELEYEVVRDAN 309

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 310 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 362

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 363 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 411


>gi|322392462|ref|ZP_08065922.1| phosphoribosylamine-glycine ligase [Streptococcus peroris ATCC
           700780]
 gi|321144454|gb|EFX39855.1| phosphoribosylamine-glycine ligase [Streptococcus peroris ATCC
           700780]
          Length = 421

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|300864111|ref|ZP_07109007.1| cyanophycin synthetase [Oscillatoria sp. PCC 6506]
 gi|300337877|emb|CBN54153.1| cyanophycin synthetase [Oscillatoria sp. PCC 6506]
          Length = 906

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR   VPV KG VI+ +   + AI  + G   V+K     G  G+G   ++ +  + 
Sbjct: 224 KKVLRDAGVPVPKGTVINYLDELQDAIADVGGYPIVIKP--LDGNHGRGITIDINSWEEA 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC--VYVEDGAD 113
                  L S  S  + I+     T         VN   V V +   
Sbjct: 282 --EEAYDLASAASKSKSIIVERFYTG-RDHRVLVVNGQVVAVAERVP 325


>gi|271968313|ref|YP_003342509.1| acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270511488|gb|ACZ89766.1| Acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 881

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 8/88 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A  LL  Y + V    V++S   A  A + L  P+ +  +   A  R       L  
Sbjct: 663 EIEASELLACYGLTVWPAEVVASPEEAVEAAERLGWPVVLKAADPEAAKR--AGTVRLGL 720

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLI 92
               GVR         + +RE LGS  +
Sbjct: 721 SGPDGVR------EAFAGLREQLGSDAV 742


>gi|228476712|ref|ZP_04061381.1| phosphoribosylamine--glycine ligase [Streptococcus salivarius
           SK126]
 gi|228251661|gb|EEK10758.1| phosphoribosylamine--glycine ligase [Streptococcus salivarius
           SK126]
          Length = 420

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|225848224|ref|YP_002728387.1| phosphoribosylamine--glycine ligase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644569|gb|ACN99619.1| phosphoribosylamine--glycine ligase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 427

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 23/118 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY+VP AK     +   A   IK++  P+ V+K+   A G+             
Sbjct: 106 AKNFMKKYSVPTAKFESFDNEKEAIEFIKSVGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GV V  + +     ++++          GP   RV    +E+  +     Y+  + D
Sbjct: 152 -GVVVAKTEEEAFQAVKDMFAGKF-----GPASKRV---VIEEFLEGEEASYICFVKD 200


>gi|168002972|ref|XP_001754187.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694741|gb|EDQ81088.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 459

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY +P AK    +    A+  IK    P+ V+K+   A G+              
Sbjct: 132 KRLCDKYEIPTAKYQSFTDAAEAKKYIKEQGAPI-VIKADGLAAGK-------------- 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +  +L    ++ + G  G  V    VE+  D   E+    LVD  +
Sbjct: 177 GVVVAMTLEEAYAAVDSML----VSSEFGSAGGLV---LVEEFLD-GEEVSFFALVDGEN 228

Query: 129 GMVAFIASTQG 139
            +   +AS Q 
Sbjct: 229 ALP--MASAQD 237


>gi|150400473|ref|YP_001324239.1| acetyl coenzyme A synthetase subunit alpha [Methanococcus aeolicus
           Nankai-3]
 gi|150013176|gb|ABR55627.1| Acetyl coenzyme A synthetase (ADP forming) alpha domain
           [Methanococcus aeolicus Nankai-3]
          Length = 714

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 12/106 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY AK  L+   + V K  + ++V  A+     L   + +  S  +   +          
Sbjct: 501 EYNAKEFLKINGISVPKKYLATTVEEAKQYASKLNNKVVLKISSPNILHKSDAG------ 554

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
                  V  + K + +   EI+ +             ++ V VE+
Sbjct: 555 ------CVIINPKDIKTAFNEIMENGRKFLNANAPNGVIDGVLVEE 594


>gi|41352951|gb|AAS01097.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAEG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A +E      ++ + + +R  G N
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQEKLKEVGVKIYVRRGGPN 110


>gi|315605765|ref|ZP_07880797.1| phosphoribosylamine-glycine ligase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312463|gb|EFU60548.1| phosphoribosylamine-glycine ligase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 444

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 17/106 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A+    +++    +A   L  P +VVK    A G+             
Sbjct: 109 AKKIMADAGVATARSFTCTTMEEVSAAFDELGAP-HVVKDDALAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGST--LITKQTGPTGSRVNCVYVEDG 111
            GV V S  +   +  R  L      +  +    G  V+   V DG
Sbjct: 155 -GVVVTSDREEASAHARACLARDGGAVVVEDYLDGPEVSLFCVADG 199


>gi|283455660|ref|YP_003360224.1| carbamoyl-phosphate synthase large chain [Bifidobacterium dentium
           Bd1]
 gi|283102294|gb|ADB09400.1| carB Carbamoyl-phosphate synthase large chain [Bifidobacterium
           dentium Bd1]
          Length = 1126

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K ++   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKADMNAPRYGTALSLEEAREAAHGIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLRKYVDRAL--REAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVEEAGAESARSDIAHSIEEVDRIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R       +      +D   V       I    + P+  +T  +   L D+
Sbjct: 222 -RDKKDNVVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 267


>gi|171743369|ref|ZP_02919176.1| hypothetical protein BIFDEN_02500 [Bifidobacterium dentium ATCC
           27678]
 gi|171278983|gb|EDT46644.1| hypothetical protein BIFDEN_02500 [Bifidobacterium dentium ATCC
           27678]
          Length = 1113

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K ++   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 669 EVLKKADMNAPRYGTALSLEEAREAAHGIGYPVLVRPSYVLGG---------------RG 713

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 714 MEIVYDDAQLRKYVDRAL--REAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 771

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 772 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 819

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 820 VQGLINVQYAFMANTLYVIEANP 842



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 116 RELFKKVVEEAGAESARSDIAHSIEEVDRIAEKFGYPLVV---------RPSFTMGGLGS 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 167 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELM- 208

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R       +      +D   V       I    + P+  +T  +   L D+
Sbjct: 209 -RDKKDNVVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 254


>gi|332708454|ref|ZP_08428430.1| phosphoribosylamine--glycine ligase [Lyngbya majuscula 3L]
 gi|332352785|gb|EGJ32349.1| phosphoribosylamine--glycine ligase [Lyngbya majuscula 3L]
          Length = 423

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 17/110 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++   VP     V +    A + +K    P+ VVK+   A G+             
Sbjct: 108 AKDLMQSAGVPTPSFAVFTEPEPALAYVKAQVAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPT--GSRVNCVYVEDGADIL 115
            GV V +++      +  +  +   T        G  V+ + V DG  + 
Sbjct: 154 -GVTVAATIDEAEMAVESLFQNGFETVVIEECVTGQEVSVLAVTDGLTVR 202


>gi|329938777|ref|ZP_08288173.1| phosphoribosylamine-glycine ligase [Streptomyces griseoaurantiacus
           M045]
 gi|329302268|gb|EGG46160.1| phosphoribosylamine-glycine ligase [Streptomyces griseoaurantiacus
           M045]
          Length = 418

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++   AE+A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAGVPTARSYVCTTPEEAETALDAFGAP-YVVKDDGLAAGKG 152


>gi|322374244|ref|ZP_08048776.1| phosphoribosylamine--glycine ligase [Streptococcus sp. C150]
 gi|321276848|gb|EFX53921.1| phosphoribosylamine--glycine ligase [Streptococcus sp. C150]
          Length = 420

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|264676745|ref|YP_003276651.1| cyanophycin synthetase [Comamonas testosteroni CNB-2]
 gi|262207257|gb|ACY31355.1| cyanophycin synthetase [Comamonas testosteroni CNB-2]
          Length = 856

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  ++ V  A +  + +  P+ VVK Q   G +GKG    +      
Sbjct: 209 KRLLHAAGVPVPMGRPVTDVEDAWAVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTREG- 264

Query: 69  GVRVESSLKSVISDIREIL 87
              +E++ K+      EIL
Sbjct: 265 ---LEAAYKTASEFGDEIL 280


>gi|218442117|ref|YP_002380446.1| carbamoyl phosphate synthase large subunit [Cyanothece sp. PCC
           7424]
 gi|218174845|gb|ACK73578.1| carbamoyl-phosphate synthase, large subunit [Cyanothece sp. PCC
           7424]
          Length = 1082

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPV    + S++  A++    +     +++     GG G G           
Sbjct: 133 KDAMARIGVPVCPSGIASNLDQAKAIALEIGSYPLIIRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +              +  Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFE-----------VMAQYGLDCSPVSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|306823312|ref|ZP_07456687.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           dentium ATCC 27679]
 gi|309802567|ref|ZP_07696671.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           dentium JCVIHMP022]
 gi|304553019|gb|EFM40931.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           dentium ATCC 27679]
 gi|308220631|gb|EFO76939.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           dentium JCVIHMP022]
          Length = 1126

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K ++   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKADMNAPRYGTALSLEEAREAAHGIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLRKYVDRAL--REAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVEEAGAESARSDIAHSIEEVDRIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R       +      +D   V       I    + P+  +T  +   L D+
Sbjct: 222 -RDKKDNVVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 267


>gi|147677842|ref|YP_001212057.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273939|dbj|BAF59688.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 701

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 28/166 (16%)

Query: 255 AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF------------------ 296
           A   + S I     +  + N  G  +   D I+L G   A F                  
Sbjct: 287 AVAFSKSAIPAGDRVAIVTNSGGPGIIATDNIELKGLRMARFDKSTIEELRASLPPEAGI 346

Query: 297 ---LDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKIN 352
              +DV G A   +   A + + +D +V  +L+ +    + R   + + I+ A       
Sbjct: 347 YNPVDVLGDASAGRYEFALQKVLADPNVDSVLVLVCPTAVTRPAEISRVIIKARDTHPGK 406

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
                   G  +  G  L+AE+G+   T  +        +  +KG+
Sbjct: 407 PVFAAYTGGRLLSEGAGLLAEAGVPCFTFPET------AIECIKGL 446



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 74/226 (32%), Gaps = 36/226 (15%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y +P A  V+ ++   A +  + +  P+ +  +      +      +    S  GV+   
Sbjct: 499 YGIPAAPAVLTTTPEEAVAVAEKMGYPVVLKVASPRILHKTDVGGVKTGISSPAGVKQAF 558

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
               ++  +   L   +           ++ V V+       EL + +  D   G    I
Sbjct: 559 --IEIMESVHRYLPKVV-----------IHGVEVQKMMPKGTELIIGMTRDVQFG--PLI 603

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-----------LCDMLELQGQA 183
           A   GG+ +  +     +           G+T E               L        + 
Sbjct: 604 AFGLGGVYVNLLKDVTFRL--------AGGLTDEKAIEQMLAETKAYTLLKGYRGETPKD 655

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                D+   + +   D  +++ ++INP+   + G +  LD KI+ 
Sbjct: 656 IAAVVDVIRRVAQLVTDFPEITEMDINPVFAYEKG-ISALDIKITI 700


>gi|332364897|gb|EGJ42665.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK355]
          Length = 421

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTAAYGTFSDFEEAKSYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLE 190


>gi|322390558|ref|ZP_08064075.1| phosphoribosylamine-glycine ligase [Streptococcus parasanguinis
           ATCC 903]
 gi|321142754|gb|EFX38215.1| phosphoribosylamine-glycine ligase [Streptococcus parasanguinis
           ATCC 903]
          Length = 420

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTASYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|302385686|ref|YP_003821508.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           saccharolyticum WM1]
 gi|302196314|gb|ADL03885.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           saccharolyticum WM1]
          Length = 1066

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+ A   L  P+ V  S +  G   +    +        
Sbjct: 673 KILEECRIPRPAGQTVFTAEEAKKAAGELGYPVLVRPSYVLGGQGMQIAISD-------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   +  I +I     I       G  +    V DG DI
Sbjct: 725 ----QDIDEFMGIINQIAQEHPILVDKYIPGKEIEVDAVCDGEDI 765


>gi|2127793|pir||A64472 carbamoyl-phosphate synthase, large chain (EC 6.3.-.-) -
           Methanococcus jannaschii
          Length = 487

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 38/188 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N PV K   ++SV  A    + +  P+ V  +    G            
Sbjct: 131 RELFAEAMAEINEPVTKCKAVNSVDEAVEFAEEIGYPVIVRPAFTLGG------------ 178

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +I    + L  ++           +N V +++     +E  L ++ 
Sbjct: 179 -TGGGI--AHNKEELIDITSKGLKYSI-----------INQVLIDESVLGWKEFELEVMR 224

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQ 180
           DR    +       G  +I+ +     + I    I    D            +   L ++
Sbjct: 225 DRKDTCIIV----CGMENIDPMGIHTGESIVVSPIQTLPDEFYQKLRNAAIKIIRHLGIE 280

Query: 181 GQARIDGG 188
           G   I   
Sbjct: 281 GGCNIQFA 288


>gi|217970451|ref|YP_002355685.1| CoA-binding protein [Thauera sp. MZ1T]
 gi|217507778|gb|ACK54789.1| CoA-binding domain protein [Thauera sp. MZ1T]
          Length = 895

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 40/243 (16%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            ++E ++KALL  + +P+A+ VV  S   A      +  P+ V+K               
Sbjct: 490 KLNEMESKALLAAFRIPIAQTVVARSAAEAMVLSAEIGLPV-VMKID---------SPNI 539

Query: 62  LPADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--REL 118
           +     GGVR+   SL +V S  +EIL      K+  P  + +N + +E        REL
Sbjct: 540 VHKSEVGGVRLNIRSLAAVRSTYQEILDEV---KRVQPE-AVINGIAIEPMIQKRNGREL 595

Query: 119 YLSLLVDRTSGMVAF---IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV----- 170
            +S+          F   I   +GG  +EE           + + PL     +D+     
Sbjct: 596 VVSV-----RRDPVFGPAITFGEGGNLVEENRDVA------VALPPLNSFLVKDMIRSTR 644

Query: 171 --ASLCDMLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKIS 227
               L +   +          +   + +  C+   ++ +EINPLI+ +NG +  +D+ IS
Sbjct: 645 ISTRLGEFRNMPAVDMNALELVLLRISEMVCELPWITAMEINPLIVDENG-VVAVDANIS 703

Query: 228 FDD 230
            ++
Sbjct: 704 VEN 706


>gi|326203550|ref|ZP_08193414.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           papyrosolvens DSM 2782]
 gi|325986370|gb|EGD47202.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           papyrosolvens DSM 2782]
          Length = 1071

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P  +G  I ++  A +A   L  P+ V  S +  G                G
Sbjct: 675 EILEKTGIPRPQGKTIFTLEEAIAAANELGYPVLVRPSYVLGG---------------QG 719

Query: 70  VRVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
           + +  + K V   +  I  +     I       G  +    + DG +I
Sbjct: 720 MEIAYNDKDVKEFMEIITRTVQEHPILVDKYMMGKEIEVDAICDGEEI 767



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 34/217 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +   P     V++++  A    + +  P+ V  +    G             + G
Sbjct: 133 KDTMERIGEPCIASKVVTTIEDAVEFAREIDYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +             T + G   SRV+ V +E      +E+   ++  R S
Sbjct: 180 GI--VYNEEELRE-----------TGENGLRLSRVHQVLIEKCISGWKEIEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQAR 184
                       +D   V       I         D    +       +   L +QG   
Sbjct: 225 KGNVITVCNMENIDP--VGVHTGDSIVVAPSQTLADKEYQMLRTSALKIISALGIQGGCN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           +       +   A  + +  +   + L     G    
Sbjct: 283 VQYALHPTSFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|153874191|ref|ZP_02002503.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS]
 gi|152069345|gb|EDN67497.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS]
          Length = 567

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 32/232 (13%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KA+L  +N+PV + + + +V  A  A +T+  P+ +               K      
Sbjct: 172 ESKAILAAFNIPVTQTIKVFNVEEAMIAAETMGFPVAL----------KLNMSKFSHKSD 221

Query: 67  KGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL---RELYLSL 122
            GGVR+  +S++ ++    E+    LI K        +  V   +        REL + +
Sbjct: 222 VGGVRLNINSVQEIVHHFHEM--ERLIKKNHTDIDKVIMTV---EPMYHSYNGRELMIGV 276

Query: 123 LVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           + D   G  A      G M     D         + + K +I       ++    L +  
Sbjct: 277 IRDPVFG-PAISFGLGGTMVEVLQDKAVALPPLNEYMVKQMIS-----KTKAAKYLREFR 330

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +L         D   N+     +  ++  L+INPLI    G +  +D++I  
Sbjct: 331 QLPEINCQALVDTLLNVSTMVSELSEIVELDINPLIADDRG-VMAVDARIKV 381


>gi|34592271|gb|AAQ76332.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 111

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G     N+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLTNYGEYSGGPTTGETKFYAETIFDLMTSEKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       +++  + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVDTKIYVRRGGPNY 111


>gi|167044269|gb|ABZ08949.1| putative phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           protein [uncultured marine crenarchaeote
           HF4000_APKG5N21]
          Length = 420

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L++ N+P A   V      A+  +  +   + VVK+   A G+             
Sbjct: 103 AKQFLKRNNIPTASFEVFDDAGKAKEYVNQIEYNV-VVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S         + +   L+ K+ G  G   N + +E+  D +   Y++ L D  
Sbjct: 149 -GVIVCDSKDE----AEKSIDMMLVDKKFGDAG---NNIIIEERIDGIEASYIA-LSDGK 199

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
             +   +A++Q    I +  K
Sbjct: 200 IAIP--MATSQDHKRIFDNDK 218


>gi|89895605|ref|YP_519092.1| hypothetical protein DSY2859 [Desulfitobacterium hafniense Y51]
 gi|89335053|dbj|BAE84648.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 1065

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 74/228 (32%), Gaps = 41/228 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           ++L++    PV   V++S +  A S  + +  P+ V  +    G             + G
Sbjct: 139 RSLMKMLGEPVPPSVIVSDLEEALSFGEEIGYPVIVRPAYTLGG-------------TGG 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +    +  L ++L           ++ + VE      +E+   +L  R S
Sbjct: 186 GI--AHNREQLREIAKSGLQASL-----------IDQILVEKSVAGWKEIEYEVL--RDS 230

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQG 181
                       MD   V          +++ P   +T  +V         +   L ++G
Sbjct: 231 QGNCITICNMENMDPVGVHTG-----DSMVVAPCQTLTDREVQALRTSSRKIVAALGIEG 285

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
              +        L     + +  L   + L     G     + +KI+ 
Sbjct: 286 GCNVQYALHPERLEYVVIEVNPRLSRSSALASKATGYPIAKVAAKIAL 333


>gi|302858044|ref|XP_002960004.1| hypothetical protein VOLCADRAFT_101515 [Volvox carteri f.
          nagariensis]
 gi|300253596|gb|EFJ38931.1| hypothetical protein VOLCADRAFT_101515 [Volvox carteri f.
          nagariensis]
          Length = 316

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 9  KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
          K LL    VPV  G  +  V  A    + +  P+ VVK Q   G +GKG    +    + 
Sbjct: 33 KRLLHAAGVPVPLGRPVKDVEEAWLVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTHEQL 89

Query: 69 GVRVESSLK 77
               ++ +
Sbjct: 90 KAAFATASE 98


>gi|125973760|ref|YP_001037670.1| phosphoribosylamine--glycine ligase [Clostridium thermocellum ATCC
           27405]
 gi|256004490|ref|ZP_05429469.1| phosphoribosylamine/glycine ligase [Clostridium thermocellum DSM
           2360]
 gi|281417916|ref|ZP_06248936.1| phosphoribosylamine/glycine ligase [Clostridium thermocellum JW20]
 gi|125713985|gb|ABN52477.1| phosphoribosylamine--glycine ligase [Clostridium thermocellum ATCC
           27405]
 gi|255991495|gb|EEU01598.1| phosphoribosylamine/glycine ligase [Clostridium thermocellum DSM
           2360]
 gi|281409318|gb|EFB39576.1| phosphoribosylamine/glycine ligase [Clostridium thermocellum JW20]
 gi|316940047|gb|ADU74081.1| phosphoribosylamine/glycine ligase [Clostridium thermocellum DSM
           1313]
          Length = 419

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 34/162 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A+  +  +   A + ++    P+ VVK+   A G+             
Sbjct: 106 AKNLMKKYNIPTARYEIFENSADAINYLQDQKYPV-VVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +       ++ I    +  K  G  G   N V +E+   + +E  +S+L    
Sbjct: 152 -GVIIAQNFDEAKQAVQSI----MEDKVFGEAG---NKVVIEEFL-VGQE--VSMLAFTD 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLID 160
              +  + S+Q          G++   +    P +I+   ID
Sbjct: 201 GKTIKTMVSSQDHKRALDNDQGLNTGGMGTFSPSRIYTEEID 242


>gi|299529566|ref|ZP_07043003.1| cyanophycin synthetase [Comamonas testosteroni S44]
 gi|298722429|gb|EFI63349.1| cyanophycin synthetase [Comamonas testosteroni S44]
          Length = 856

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  ++ V  A +  + +  P+ VVK Q   G +GKG    +      
Sbjct: 209 KRLLHAAGVPVPMGRPVTDVEDAWAVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTREG- 264

Query: 69  GVRVESSLKSVISDIREIL 87
              +E++ K+      EIL
Sbjct: 265 ---LEAAYKTASEFGDEIL 280


>gi|166030993|ref|ZP_02233822.1| hypothetical protein DORFOR_00674 [Dorea formicigenerans ATCC
           27755]
 gi|166029260|gb|EDR48017.1| hypothetical protein DORFOR_00674 [Dorea formicigenerans ATCC
           27755]
          Length = 1077

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A++    L  P+ V  S +  GG+G              
Sbjct: 682 EILEKCQIPRPTGGTVFTAEEAKTVANRLGYPVLVRPSYVL-GGQGMQIAINDN------ 734

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 ++  I  I +I     I       G  +    V DG DI
Sbjct: 735 -----DIEEFIGIINQIAQDHPILVDKYLQGKEIEVDAVCDGEDI 774


>gi|126459988|ref|YP_001056266.1| L-2-aminoadipate N-acetyltransferase [Pyrobaculum calidifontis JCM
           11548]
 gi|126249709|gb|ABO08800.1| L-2-aminoadipate N-acetyltransferase [Pyrobaculum calidifontis JCM
           11548]
          Length = 267

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR   VP  +  +   +  A++A + L  P+ +VK    + GR               V 
Sbjct: 82  LRDAGVPTPRTFLAFGLEGAKAAAEKLGYPV-IVKPTDGSWGRF--------------VS 126

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  S + + + + + L       ++G     V     + G DI     ++++ +R    +
Sbjct: 127 LAKSPEDLEAIVAQRLAM-----ESGLHLYLVQEYLEKPGRDIR----VTVVGERAVAAI 177

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKL 157
             I S     +     K  P KI   
Sbjct: 178 YRINSADWRTNTARGGKAEPVKIDPE 203


>gi|33603781|ref|NP_891341.1| acetyl-CoA synthetase [Bordetella bronchiseptica RB50]
 gi|33577906|emb|CAE35171.1| acetyl-CoA synthetase [Bordetella bronchiseptica RB50]
          Length = 729

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 29/233 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGR 58
           M   E +AK L+R   +      +      A +    L  P+   +V  +I         
Sbjct: 493 MQYSETEAKRLVRSIGIQTLPERIAQDPAQAAAIATELGFPVALKIVSPEIL-------- 544

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                +D  G      +     S    ++    + +       R++ + +   A    +L
Sbjct: 545 ---HKSDVGGVQLAVQTADEARSVYTSMMAR--VRRNCPQA--RIDGIAIAPMARPGVDL 597

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG------VTSEDVAS 172
            L  + D T G    + S  GG+  E +A      I +   D          +    +  
Sbjct: 598 ILGCIQDPTFGPCLMLGS--GGVYTEILADAV---IRRAPFDAATARSMIAQLKGAPLLD 652

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
               +       +       ++Y     + +  LEINPL ++  G+ +  LD+
Sbjct: 653 GARGMPRADTDALAQAVALLSVYAYANRRHIESLEINPLRVLPAGQGVVALDA 705


>gi|332665548|ref|YP_004448336.1| carbamoyl-phosphate synthase, large subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332334362|gb|AEE51463.1| carbamoyl-phosphate synthase, large subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 938

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 62/212 (29%), Gaps = 38/212 (17%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E +     LL++  +P     V   V  A      +  P+ V  S +  G      
Sbjct: 666 MDLAEDRGAFSDLLKELEIPYPDYGVADDVDEAIRIANKVGYPVLVRPSYVLGG------ 719

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      +R+  + + V   +  I                 N V ++   D  +E 
Sbjct: 720 ---------QSMRIVINDQEVERHVLSIFKHM-----------PENKVLIDHFLDRAKEA 759

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            +  + D     +  I        I           + L +D  +    E    L   L 
Sbjct: 760 EIDAIFDGEDIHIMGIMEHIEPAGIHSGDSSAVLPTYSLSVD-AVATMVEHAEKLARALN 818

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINP 210
           ++G   I           A  D  + ++E NP
Sbjct: 819 IRGLINIQF---------AIKDNHVYVIEANP 841


>gi|260220383|emb|CBA27867.1| hypothetical protein Csp_A04420 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 811

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K+LL+   VPV +G +++S   A  A + +  P+ V
Sbjct: 246 KSLLKSCGVPVPEGTLVNSPEKAWEAAQDIGLPVAV 281


>gi|18978086|ref|NP_579443.1| carbamoyl phosphate synthase large subunit [Pyrococcus furiosus DSM
           3638]
 gi|22095505|sp|Q8U085|CARB_PYRFU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|18893879|gb|AAL81838.1| carbamoyl-phosphate synthase large chain (glutamine-hydrolysing)
           [Pyrococcus furiosus DSM 3638]
          Length = 1056

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 40/184 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++K  +PV       +   A    +++  P+ +V+   + GGRG                
Sbjct: 134 MKKVGLPVPPSDAAKTPEEAIEIAESIGFPV-IVRVSFNLGGRGSF-------------- 178

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  S +     I      +            +  V VE   +  +E+   ++ D+    V
Sbjct: 179 IARSREEFEKYIIRAFAQS-----------EIRKVLVEKYLNGWKEIEFEVVRDKAGNSV 227

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
           A +        +E V          +++ P   +T+ +          + D +EL G+  
Sbjct: 228 AVVC-------LENVDPMGVHTGESIVVGPSQTLTNREYQMLRDAAIRVADAIELIGEGN 280

Query: 185 IDGG 188
           +   
Sbjct: 281 VQLA 284



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 3/107 (2%)

Query: 5   EYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           E +AK   LL K  +P  + +   S+  A    K +  P+ V  S + +G   K  + E 
Sbjct: 655 ENRAKFSKLLEKLGIPQPEWISAESIDEAIKLAKKIEYPVIVRPSYVLSGTAMKVAWNEK 714

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
                       S +  +   + I G+          G +V  V +E
Sbjct: 715 ELIDFLKEAASVSPEHPVLISKFIPGTEAEIDAVS-DGKKVVGVTLE 760


>gi|288560104|ref|YP_003423590.1| pyruvate carboxylase subunit A PycA [Methanobrevibacter ruminantium
           M1]
 gi|288542814|gb|ADC46698.1| pyruvate carboxylase subunit A PycA [Methanobrevibacter ruminantium
           M1]
          Length = 497

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 39/212 (18%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L+++  VPV +G    I  V  A+   + +  P+ ++K+    GG            
Sbjct: 119 SKQLMKEAGVPVIEGTPEGIDDVEEAKEIAEAIGYPV-IIKASAGGGGI----------- 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R   S + ++  +       L              V++E   +  R +   +L D
Sbjct: 167 ---GMRAVYSEEELVRALEATQSVALKNFGDA-------TVFIEKYLEKPRHIEFQILAD 216

Query: 126 RTSGMVAFIASTQGGMDI--EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
                +  +   +  +    +++ ++ P  I    +   +G   E      + +      
Sbjct: 217 EYGNTIH-VGDRECSIQRRHQKLLEEAPSPIMTEELRERMG---ESAVKAAEYIGYNSAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           + + D   LE+N  I ++
Sbjct: 273 TVEF---------LYDNGDYYFLEMNTRIQVE 295


>gi|320334318|ref|YP_004171029.1| cyanophycin synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755607|gb|ADV67364.1| cyanophycin synthetase [Deinococcus maricopensis DSM 21211]
          Length = 937

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  +P  +G V+ S   A  A + L GP+ V K      GRG       P D   
Sbjct: 262 KRLLDRAGLPTPQGAVVRSADEAVRAARRLRGPV-VTKPLDGNHGRGVSLNLTAPEDIHR 320

Query: 69  GVRVESSLKSVISDIREI 86
           G       +      R++
Sbjct: 321 G------FEEARQHSRDV 332


>gi|163856170|ref|YP_001630468.1| cyanophycin synthetase [Bordetella petrii DSM 12804]
 gi|163259898|emb|CAP42199.1| cyanophycin synthetase [Bordetella petrii]
          Length = 857

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G  +S   AA  A++ L GP+ V+K +  + GRG     E     + 
Sbjct: 210 KMLLDAAGVPVPRGCSVSDPQAAWDAVRELGGPV-VIKPRDGSQGRGVAVNIETREQVEA 268

Query: 69  GVRVESSL 76
             R  + +
Sbjct: 269 AYRAAADI 276


>gi|148265862|ref|YP_001232568.1| phosphoribosylamine--glycine ligase [Geobacter uraniireducens Rf4]
 gi|146399362|gb|ABQ27995.1| phosphoribosylamine--glycine ligase [Geobacter uraniireducens Rf4]
          Length = 423

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+RKYNVP A   V + V  A + I     P+ V+K+   A G+             
Sbjct: 106 SKDLMRKYNVPTAAYEVFTEVEPAIAFIDRTGVPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +    ++ + ++L         G  G   + V +E+        +L+  
Sbjct: 152 -GVIIAQTRDEAVAAVTDML----SGNSFGAAG---SRVVIEEFLKGEEASFLAFT 199


>gi|41409492|ref|NP_962328.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398323|gb|AAS05944.1| PurK [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 426

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 68/212 (32%), Gaps = 57/212 (26%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VPV +   I+S+   ++  + + GP+ VVK+ +  G  G+            GVR
Sbjct: 132 LESLGVPVPRYAEINSLDELDAFARRVGGPV-VVKA-VRGGYDGR------------GVR 177

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +              L            G  V     E+   + RE  LS LV R     
Sbjct: 178 MARDPVHAREIAAAFL----------ADGVPV---LAEEQVSLRRE--LSALVAR----- 217

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQA 183
               S  G G     V       I   +I P  G+  +  A        L   L + G  
Sbjct: 218 ----SPFGQGAAWPVVETVQRDGICVQVIAPAPGLGEDLAADAQRLALRLAGELGVVGVL 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           F   D +LL +N L +  
Sbjct: 274 AVE----------LFETTDGALL-VNELAMRP 294


>gi|85539381|emb|CAJ57306.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFADVAKTFTGIIQAFEKYADEMKDVGTRIYVRRGGPNY 112


>gi|167043818|gb|ABZ08508.1| putative phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           protein [uncultured marine crenarchaeote
           HF4000_APKG3D24]
          Length = 420

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L++ N+P A   V      A+  +  +   + VVK+   A G+             
Sbjct: 103 AKQFLKRNNIPTASFEVFDDAVKAKEYVNQIEYNV-VVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S         + +   L+ K+ G  G   N + +E+  D +   Y++ L D  
Sbjct: 149 -GVIVCDSKDE----AEKSIDMMLVDKKFGDAG---NNIIIEERIDGIEASYIA-LSDGK 199

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
             +   +A++Q    I +  K
Sbjct: 200 IAIP--MATSQDHKRIFDNDK 218


>gi|94264572|ref|ZP_01288357.1| cyanophycin synthetase [delta proteobacterium MLMS-1]
 gi|93454990|gb|EAT05224.1| cyanophycin synthetase [delta proteobacterium MLMS-1]
          Length = 891

 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           H+Y A  LL  + +PV    + +++  A    + L  P+ V
Sbjct: 225 HKYVANRLLVDHGLPVPPAGLAANLEQAVKLAEQLGWPVVV 265


>gi|297617486|ref|YP_003702645.1| carbamoyl-phosphate synthase, large subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145323|gb|ADI02080.1| carbamoyl-phosphate synthase, large subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 1072

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 40/188 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + +     SV  AE   K L  P+ +               +        
Sbjct: 133 KETMERLGIEMPRSQAAYSVEEAEEIAKELGYPVVI---------------RPAYTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +L+ + + +   L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNLEELRTVVSRGLAASL-----------VGQVLVEESVLGWEELELEVVRDAKN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQG 181
             +           IE V            + P++ ++        E    + + + + G
Sbjct: 227 QKITV-------CFIENVDAMGVHTGDSFCVAPMLTISPELQERLQEYAYRVVEAIGVIG 279

Query: 182 QARIDGGD 189
              I    
Sbjct: 280 GTNIQFAH 287



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + ++    +P+ +  + +++  A      +  PL V  S +  GGRG
Sbjct: 671 RRMMESLGIPMPEAGMAANLEEALEVAARIGYPLMVRPSYVL-GGRG 716


>gi|196231237|ref|ZP_03130096.1| CoA-binding domain protein [Chthoniobacter flavus Ellin428]
 gi|196224573|gb|EDY19084.1| CoA-binding domain protein [Chthoniobacter flavus Ellin428]
          Length = 902

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 25/233 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV-VKSQIHAGGRGKGRFKE 61
           + E ++K LL  Y +P  +  +  + +AA +  + L  P+ V V SQ     +       
Sbjct: 499 LTEVESKHLLSAYGIPTVETFIAHTENAAVNRAQRLGYPVVVKVYSQTIT-HKTDVGGVR 557

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L  ++   VR     + +   +    G+          G  V  +   DG     EL   
Sbjct: 558 LQLENGAAVRRAW--REIKEAVSAKAGAD------QFQGVTVQSMIPRDGV----ELIFG 605

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
             VD   G    I    G    E V     + I    +   +     +   +   L    
Sbjct: 606 ASVDPQFG-PVLIFGAGG----ELVEVLKDRAIGLPPLTTTLARRLMERTRIFHALKGVR 660

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
             +        +L         ++  ++ ++INPL+      L  LD+++   
Sbjct: 661 GRKPVNLDALAELLVAFSHLVAEQPWIAEIDINPLLASAE-HLLALDARVVLH 712



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 31/183 (16%)

Query: 231 NALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           +A +R   +  +  + E  D  E+ AKQ       L      + N  G      DI+   
Sbjct: 275 DAAFRRAGVVRVETIEELFDIAEVLAKQPPPRGPRL----AIVTNAGGPGALATDILVTA 330

Query: 290 GGA-----------------PA----NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG                  PA    N +D+ G AD +    AF+I  S+ SV G+L+ I
Sbjct: 331 GGQLAKLSPQTLTKLDQLLPPAWSHGNPIDLLGAADAETYGRAFEIALSEESVDGVLV-I 389

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVITAIDLDDA 387
                  D+       A      + P++   + GA+++     +  +G+      D  DA
Sbjct: 390 LTPQAMTDIDGTATQLANLARGSSKPVLASWMGGASLESARTALNAAGVPTY---DYPDA 446

Query: 388 AQK 390
           A +
Sbjct: 447 AAR 449


>gi|257059318|ref|YP_003137206.1| acetyl-CoA carboxylase biotin carboxylase subunit [Cyanothece sp.
           PCC 8802]
 gi|256589484|gb|ACV00371.1| acetyl-CoA carboxylase, biotin carboxylase [Cyanothece sp. PCC
           8802]
          Length = 449

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 39/272 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   VI +   A+   + +  P+ ++K+    GGRG  R     ++
Sbjct: 120 AKKTMQKAGVPTVPGSWGVIETEQEAQEIARDIGYPV-MIKATAGGGGRGM-RLVREDSE 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                +                         G  G     VY+E   +  R +   +L D
Sbjct: 178 FSRAFQSAQGEAEAA---------------FGNKG-----VYLEKFIERPRHIEFQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
                   +   +    I+   +   ++     + P + +   E        ++  G   
Sbjct: 218 SQGN---VVHLGERDCSIQRRHQKLLEEAPSPFLTPELRLKMGEAAVKAAKSIDYVGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-------RLRVLDSKISFDDNALYRH 236
           ++   D   N Y  F + +  +   +P+  M +G              K+SF  + +   
Sbjct: 275 VEFLVDNQGNFY--FMEMNTRIQVEHPVTEMISGLDLIAEQIRIAQGEKLSFTQDQVNLQ 332

Query: 237 LDIQELRDVSEEDSREIEAKQHNLS-YIALDG 267
               E R  +E+           +S Y+   G
Sbjct: 333 GHAIECRINAEDPDHNFRPHPGKISAYLPPGG 364


>gi|167759664|ref|ZP_02431791.1| hypothetical protein CLOSCI_02023 [Clostridium scindens ATCC 35704]
 gi|167662695|gb|EDS06825.1| hypothetical protein CLOSCI_02023 [Clostridium scindens ATCC 35704]
          Length = 1065

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEQCQIPRPTGGTVFTAEEAKEVAGRLGYPVLVRPSYVL-GGQGMQIAIND------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   I  I  I     I       G  +    V DG DI
Sbjct: 725 ----HDIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGEDI 765


>gi|329117760|ref|ZP_08246477.1| phosphoribosylamine--glycine ligase [Streptococcus parauberis NCFD
           2020]
 gi|326908165|gb|EGE55079.1| phosphoribosylamine--glycine ligase [Streptococcus parauberis NCFD
           2020]
          Length = 420

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYQVPTAAYGTFSDFEEAKAYIEKEGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +    E+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEEAVEAAHEML----LDNKFGDSGARV---VIEEFL 189


>gi|260220633|emb|CBA28368.1| hypothetical protein Csp_A06920 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 408

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 30/228 (13%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L  +++PV + ++  S + A      L  P  V+K                 +D  G   
Sbjct: 2   LSAFHIPVTRTILARSANEAMMIATQLGFP-AVLKID--------SPDISHKSDVGGVAL 52

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDRTSG 129
              +   V     ++    + T +     +R+N V V+        RE+Y+ L+ D   G
Sbjct: 53  NIMNATGVRDTYNDM----MQTVKRLRPDARINGVTVQSMVRSRHGREIYIGLVTDDPFG 108

Query: 130 MVAFIASTQGGMDIEEVA------KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
               IA   GG  IE +           Q + + LI+      S    +L +        
Sbjct: 109 --PVIAFGAGGTMIELINDRAMELPPLNQFLARRLIE-----RSRVAETLGEWRGNAPAN 161

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                 +   + +  C+   +  ++INP+I+ ++G L  +D++I  D+
Sbjct: 162 IDLLEQILLRISEMVCELPQLREMDINPIIVDEHGAL-AVDARIVIDN 208


>gi|83858534|ref|ZP_00952056.1| phosphoribosylamine--glycine ligase [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853357|gb|EAP91209.1| phosphoribosylamine--glycine ligase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 430

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 24/122 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ K  VP A+    + V  A++ + TL  P YV+K+   A G+             
Sbjct: 106 SKDLMAKLGVPTARYGRFTEVDKAKAFLDTLEAP-YVLKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L    ++  E+L        +G  G     + +E+      E  + +L D  
Sbjct: 152 -GVVIAPTLDEAKAEAEEML--------SGKFGDASAELVIEEFM-HGEEASVFVLTDGV 201

Query: 128 SG 129
           + 
Sbjct: 202 NR 203


>gi|304939649|emb|CBH30841.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        DS  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETRFYAETLLDLMTREPDSKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   + + + +R  G N 
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYAEKMKDVGVRIYVRRGGPNY 111


>gi|154685150|ref|YP_001420311.1| phosphoribosylamine--glycine ligase [Bacillus amyloliquefaciens
           FZB42]
 gi|154351001|gb|ABS73080.1| PurD [Bacillus amyloliquefaciens FZB42]
          Length = 422

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 98/329 (29%), Gaps = 50/329 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMKKYGIPTAEYETFTSFEEAKAYVQQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAMTEEEAIECLHDFL-------EDEKFGEASASVVIEEFL-AGEEFSLMAFVKGE 202

Query: 128 SGMVAFIASTQ-----GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +     IA        G              +  +  D +       V      +     
Sbjct: 203 TVYPMVIAQDHKRAFDGDNGPNTGGMGAYSPVPHISDDIVRSAVETIVKPAAKAM----- 257

Query: 183 ARIDGGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD-DNALY--RHL 237
              +G      LY      +    ++E N        ++ V   ++  D    L+   H 
Sbjct: 258 -VKEGRSFTGVLYAGLILTENGSKVIEFNARFGDPETQVVV--PRMESDLIQVLFDLLHE 314

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL-------YG 290
              +LR         + A +      A    IG + +            K         G
Sbjct: 315 KDVDLRWKDTAAVSVVLASEGYPEGYAKGTPIGSLTSAEDGIAVFHAGTKKDGGQFVTNG 374

Query: 291 GAPANFLDVGGG--ADQDKVAAAFKIITS 317
           G  AN         A +DKV +A   +T 
Sbjct: 375 GRVANVTAFAETFEAARDKVYSAVSGLTK 403


>gi|121715398|ref|XP_001275308.1| carbamoyl-phosphate synthase, large subunit [Aspergillus clavatus
           NRRL 1]
 gi|119403465|gb|EAW13882.1| carbamoyl-phosphate synthase, large subunit [Aspergillus clavatus
           NRRL 1]
          Length = 1175

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ + +S++  A  A + +  P+ V  +    G               
Sbjct: 225 AKAL-NEINIPIAESIAVSTLDEALKAAEEVGYPIIVRSAYALGGL-------------- 269

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G     + + + +     L             +    + VE      +E+   ++ D +
Sbjct: 270 -GSGFAENPEELKNLASRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAS 315

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 316 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 368

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 369 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 417


>gi|221069122|ref|ZP_03545227.1| cyanophycin synthetase [Comamonas testosteroni KF-1]
 gi|220714145|gb|EED69513.1| cyanophycin synthetase [Comamonas testosteroni KF-1]
          Length = 856

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  ++ V  A +  + +  P+ VVK Q   G +GKG    +      
Sbjct: 209 KRLLHAAGVPVPMGRPVTDVEDAWAVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTREG- 264

Query: 69  GVRVESSLKSVISDIREIL 87
              +E++ K+      EIL
Sbjct: 265 ---LEAAYKTASEFGDEIL 280


>gi|165940725|gb|ABY75262.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 110

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A +       ++ + + +R  G N
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGVKIYVRRGGPN 110


>gi|331084350|ref|ZP_08333454.1| carbamoyl-phosphate synthase large subunit [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330401614|gb|EGG81195.1| carbamoyl-phosphate synthase large subunit [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 1065

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 43/203 (21%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +L + ++P  KG  + +   A+ A   L  P+ V  S +  G                G+
Sbjct: 674 ILEECHIPRPKGHTVYTAEEAKKAANELGYPVLVRPSYVLGG---------------QGM 718

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           ++  + + V   I     I     I       G  +    V DG +I   L   ++    
Sbjct: 719 QIAINDEDVEEYIGIINRIAQEHPILVDKYLQGKEIEVDAVCDGENI---LIPGIMEHIE 775

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
              +        G  I         +  K  I        E    L   L + G   I  
Sbjct: 776 RAGI------HSGDSISVYPARTISETAKKTI-------EEYTRRLAKSLHVLGMINIQF 822

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                      C +++ ++E+NP
Sbjct: 823 ---------IVCGEEVYVIEVNP 836


>gi|322378076|ref|ZP_08052563.1| phosphoribosylamine--glycine ligase [Streptococcus sp. M334]
 gi|321281058|gb|EFX58071.1| phosphoribosylamine--glycine ligase [Streptococcus sp. M334]
          Length = 420

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 96/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I+     + VVK+   A G+             
Sbjct: 107 AKEIMVKYGVPTATYGTFSDFEEAKAYIEKEGASI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++K  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVKQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            +      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VETIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  ++ K+ N+++      +G +V   G  +     +KL
Sbjct: 304 DFAQNITDILDGKEPNITWTDKSVTLGVVVASNGYPLDYEKGVKL 348


>gi|78776625|ref|YP_392940.1| phosphoribosylamine--glycine ligase [Sulfurimonas denitrificans DSM
           1251]
 gi|78497165|gb|ABB43705.1| phosphoribosylamine--glycine ligase [Sulfurimonas denitrificans DSM
           1251]
          Length = 426

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KYN+P A+ +  +S+  A      L  P+ VVK+    GG+              
Sbjct: 105 KNFLAKYNIPTARYIETASIEEAFKFTDKLQTPI-VVKADGLCGGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  +       I E+L      K  G  G     V VE+  D
Sbjct: 150 GVIIALTHDEAKVAISEML----SGKSFGDAGK---KVIVEEFLD 187


>gi|27983596|gb|AAM94652.1| acetyl-CoA synthetase [Spironucleus barkhanus]
          Length = 710

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 77/237 (32%), Gaps = 43/237 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            + +   V      + ++   A      L  P+   +V +QI              +D  
Sbjct: 499 EIFQIMGVSAPLTKLAATKEEAGKFADELKYPIVMKIVSAQIM-----------HKSDCG 547

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-----ELYLSL 122
           G      + +  I+   EI+ +    K  GP+G+ +  V V+   D  +     E+ + +
Sbjct: 548 GVKLFLKTKEECIAAFDEIMHN---AKTRGPSGAILKGVEVQQMVDFTKKNKSTEVIVGM 604

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D  +     +   QGG+        Y   +  +  +   G T E              
Sbjct: 605 NRDG-NFGPMIMF-GQGGV--------YANYVKDVAFELSYGYTREKAFEQLKKTKINAI 654

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                           D+   L +      ++  L++NPL++  +  +  +D KI+ 
Sbjct: 655 LEGVRGQPRSDIDGLVDILVKLSQLVTKFPEIQELDMNPLLVFDD-SIAAVDVKITI 710


>gi|328953924|ref|YP_004371258.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454248|gb|AEB10077.1| CoA-binding domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 888

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 31/180 (17%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII----K 287
           A +R   I  +  + +       A+        L G I  + NG G A+  +D +    K
Sbjct: 269 AFFRRAGIVRVDTIGQLFDC---AETLGKIQRPLGGEIAIITNGGGPALMAVDALRRWNK 325

Query: 288 LYGG-----------------APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
             G                   P N +++   A  ++ A     +       G L+ I  
Sbjct: 326 APGELSPEIQVKLANVLPAVWKPGNPINILRDATPERYAQTVHTVMEKREFSG-LVIILS 384

Query: 331 --GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
              +     +   ++   +   + I   + + G  V  G +++ ++G+         +AA
Sbjct: 385 PQTLTNPTEVAATLVRETENQNLPI-FAVWMGGDEVAPGIKILNQAGIPTFKTP---EAA 440



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 27/261 (10%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E +AKA+L  Y +PV + V  +S   A+ A + +  P+ +         +      E
Sbjct: 489 HLTELEAKAILSTYGIPVNRTVAAASAAEAKMAAQEIGFPVLL---------KINAPELE 539

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRV----NCVYVEDGADILR 116
              +    +   +    V      + G T I   Q    G  V       + E      +
Sbjct: 540 ALTERTRVIYHLNDDLQVERAFDRLTGETRIRHPQFRNLGVTVQAQERKPHFELFIGCRQ 599

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           + +   L+   +G           +D+  +     +++ +                L   
Sbjct: 600 DPHFGPLLGFGTGGPFVEIFRDIAVDLPPLNLLLARRLMERT-------RIFQA--LAGE 650

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL-- 233
            +L         ++   + +   D  ++  LEINPL I  NGR   + +++  + + L  
Sbjct: 651 SQLPAADLDQLAEILVRVSQLATDFPEIGFLEINPLFI-INGRATAVAARLIVEASELPA 709

Query: 234 YRHLDIQELRDVSEEDSREIE 254
            RHL I    +  E D    +
Sbjct: 710 PRHLIIAPYPNQYENDWMLRD 730


>gi|52549053|gb|AAU82902.1| putative acetyl-CoA synthetase [uncultured archaeon GZfos22D9]
          Length = 233

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 83/228 (36%), Gaps = 18/228 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKAL+  + + V K V+I  +       K +  P  V+K           +    
Sbjct: 21  LFEPEAKALVSAWGIQVPKSVLIDELADVALKSKEI-TPPLVLKVV--------SQDILH 71

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +  G +   +  +     ++E+      T       +R+    +E+ A    EL +  
Sbjct: 72  KREFGGVITGINDSEEASIALKEM----KRTLAEKAPKARIAGFLLEETAPTGIELIIGG 127

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L D   G      +    +++ ++V+        + + D +  V S  +  L      + 
Sbjct: 128 LRDPQFGPAVMFGTGGFAVELVKDVSFRLAPLNREEVFDMMQEVKSYPL--LTGFRGSKP 185

Query: 182 QARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGRLRVLDSKISF 228
                       L       +++  +EINPL++ ++ R   +D+++  
Sbjct: 186 VDLEKLASTVMKLSDILLAIEEIKEIEINPLLVHED-RAVAVDARVVL 232


>gi|323699487|ref|ZP_08111399.1| CoA-binding domain protein [Desulfovibrio sp. ND132]
 gi|323459419|gb|EGB15284.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132]
          Length = 901

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 76/238 (31%), Gaps = 36/238 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK +L  Y +PV +  +  S   A  A   L  P+ +         + +      
Sbjct: 494 LTEPEAKDILAAYGIPVVETRIAVSAKEAVIAADALGYPVAL---------KLRSPQVPQ 544

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLS 121
           P D  G +    + + V      IL      +      G  V  +          EL +S
Sbjct: 545 PYDVGGVLLDLETPERVWEGAASILARCTRERPDAYIEGFTVQRM---GRRPGAHELSVS 601

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYP-----------QKIFKLLIDPLIGVTSEDV 170
             +D   G V       GGM  E +                + + +  I  L+  T   V
Sbjct: 602 ARLDPVFGPVLQFG--HGGMAREMIQDQAQTLPPLSMSLAREVVSRTRISTLLKGTPSHV 659

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            +  D + L            P +         + ++INPL     G +  LD+KI  
Sbjct: 660 PADIDDICLTLIQISQLIVDVPQI---------TAIDINPLYADSEG-VLALDAKIDI 707


>gi|168483643|ref|ZP_02708595.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC1873-00]
 gi|172042970|gb|EDT51016.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC1873-00]
 gi|332205085|gb|EGJ19148.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA47368]
          Length = 420

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D+     L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDIIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|149378285|ref|ZP_01895995.1| Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Marinobacter algicola DG893]
 gi|149357419|gb|EDM45931.1| Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Marinobacter algicola DG893]
          Length = 371

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +  +P  +  +  S  + ++A + L  P+ V KS                     
Sbjct: 99  KTLFGELGIPTPEWKIADSAESLQAAAEELGCPV-VAKS-------------NTEGYDGK 144

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  S +      + I             G     + VE   +  RE  +S++  R  
Sbjct: 145 GQAVLRSPEDAAEAWKSI-------------GHP--RLIVEKFVEFRRE--VSIIAVRAE 187

Query: 129 GM 130
             
Sbjct: 188 DG 189


>gi|169783542|ref|XP_001826233.1| carbamoyl-phosphate synthase (glutamine-hydrolysing) large subunit
           [Aspergillus oryzae RIB40]
 gi|238493361|ref|XP_002377917.1| carbamoyl-phosphate synthase, large subunit [Aspergillus flavus
           NRRL3357]
 gi|83774977|dbj|BAE65100.1| unnamed protein product [Aspergillus oryzae]
 gi|220696411|gb|EED52753.1| carbamoyl-phosphate synthase, large subunit [Aspergillus flavus
           NRRL3357]
          Length = 1175

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ + +++V  A  A + +  P+ V  +    G               
Sbjct: 225 AKAL-NEINIPIAESIAVNTVDEALKAAEEVGYPIIVRSAYALGGL-------------- 269

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 270 -GSGFANNPEELRNLASRSL-------------TLAPQILVEKSLRGWKEVEYEVVRDAD 315

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 316 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 368

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 369 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 417


>gi|319763273|ref|YP_004127210.1| gcn5-related n-acetyltransferase [Alicycliphilus denitrificans BC]
 gi|330825468|ref|YP_004388771.1| GCN5-like N-acetyltransferase [Alicycliphilus denitrificans K601]
 gi|317117834|gb|ADV00323.1| GCN5-related N-acetyltransferase [Alicycliphilus denitrificans BC]
 gi|329310840|gb|AEB85255.1| GCN5-related N-acetyltransferase [Alicycliphilus denitrificans
           K601]
          Length = 901

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 26/237 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV K ++  S + A      L  P+  +K                
Sbjct: 482 LTEMESKTLLAAFHIPVTKTLLARSSNEAMMIATQLGFPV-ALKID--------SPDIAH 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYL 120
            +D  G      +  +      +++      +       R+N V V+  A     RE+ +
Sbjct: 533 KSDVGGVALSVPNGAAARDAYTDMVQRVARLRPEA----RINGVTVQKMARARRGREICI 588

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE-L 179
            L+ D   G         GG  IE +     + +    ++  +     + A + + L   
Sbjct: 589 GLVCDDPFG-PVITF-GAGGTMIELIDD---RAMELPPLNQFLARRLMERARVAETLGEW 643

Query: 180 QGQARIDGGDLFPNLYKAFCDKDM----SLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +G + +D   L   L +             ++INPLI+ + G +  +D++I+  + A
Sbjct: 644 RGASAVDMQALEQVLLRVSEMVCALPQLREMDINPLIVDEQGAV-AVDARIAIHETA 699


>gi|312199068|ref|YP_004019129.1| CoA-binding domain protein [Frankia sp. EuI1c]
 gi|311230404|gb|ADP83259.1| CoA-binding domain protein [Frankia sp. EuI1c]
          Length = 718

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +K +L  Y +PVA   V+ S   A +A + L  P+ +         +       +
Sbjct: 500 LNEADSKKVLAGYGIPVAGERVVGSADDAVAAARELGLPVVMKIVSADIAHKSDLGLVVV 559

Query: 63  PADSKGGVRVES 74
               + GVR   
Sbjct: 560 GVADEAGVRATY 571


>gi|239627633|ref|ZP_04670664.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517779|gb|EEQ57645.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 1072

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L + N+P   G  + +   A+ A   L  P+ V  S +  G   +    +        
Sbjct: 678 EILEQCNIPRPAGHTVFTAEEAKKAAHELGYPVLVRPSYVLGGQGMQIAISD-------- 729

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   I  I  I     I       G  +    + DG DI
Sbjct: 730 ----EDIDEFIGIINMIAQEHPILVDKYIMGKEIEVDAICDGTDI 770


>gi|41352947|gb|AAS01095.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A +       +I + + +R  G N
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFENYAYKMKEIGVKIYVRRGGPN 110


>gi|15669568|ref|NP_248381.1| carbamoyl-phosphate synthase subunit CarB1 [Methanocaldococcus
           jannaschii DSM 2661]
 gi|22095496|sp|Q58773|CARB1_METJA RecName: Full=Carbamoyl-phosphate synthase large chain, N-terminal
           section; AltName: Full=Carbamoyl-phosphate synthetase
           ammonia chain
 gi|2826402|gb|AAB99385.1| carbamoyl-phosphate synthase, medium subunit (carB1)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 482

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 38/188 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N PV K   ++SV  A    + +  P+ V  +    G            
Sbjct: 126 RELFAEAMAEINEPVTKCKAVNSVDEAVEFAEEIGYPVIVRPAFTLGG------------ 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +I    + L  ++           +N V +++     +E  L ++ 
Sbjct: 174 -TGGGI--AHNKEELIDITSKGLKYSI-----------INQVLIDESVLGWKEFELEVMR 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQ 180
           DR    +       G  +I+ +     + I    I    D            +   L ++
Sbjct: 220 DRKDTCIIV----CGMENIDPMGIHTGESIVVSPIQTLPDEFYQKLRNAAIKIIRHLGIE 275

Query: 181 GQARIDGG 188
           G   I   
Sbjct: 276 GGCNIQFA 283


>gi|118462596|ref|YP_883386.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium avium 104]
 gi|118163883|gb|ABK64780.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Mycobacterium avium 104]
          Length = 397

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 68/212 (32%), Gaps = 57/212 (26%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VPV +   I+S+   ++  + + GP+ VVK+ +  G  G+            GVR
Sbjct: 103 LESLGVPVPRYAEINSLDELDAFARRVGGPV-VVKA-VRGGYDGR------------GVR 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +              L            G  V     E+   + RE  LS LV R     
Sbjct: 149 MARDPVHAREIAAAFL----------ADGVPV---LAEEQVSLRRE--LSALVAR----- 188

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQA 183
               S  G G     V       I   +I P  G+  +  A        L   L + G  
Sbjct: 189 ----SPFGQGAAWPVVETVQRDGICVQVIAPAPGLGEDLAADAQRLALRLAGELGVVGVL 244

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           F   D +LL +N L +  
Sbjct: 245 AVE----------LFETTDGALL-VNELAMRP 265


>gi|86605190|ref|YP_473953.1| acetyltransferase [Synechococcus sp. JA-3-3Ab]
 gi|86553732|gb|ABC98690.1| acetyltransferase, GNAT family [Synechococcus sp. JA-3-3Ab]
          Length = 931

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 42/189 (22%)

Query: 231 NALYRHL------DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD 284
           +A +R         I++L D++E  +++   +  +LS          + N  G  +   D
Sbjct: 280 DAAFRRCGVLRVDHIEDLFDMAEVLAKQPRPQGPHLS---------ILTNAGGPGVLATD 330

Query: 285 IIKLYGGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            +   GG+ A                     N +DV G A  ++ A A +I+  D   +G
Sbjct: 331 ALIRAGGSLASLAPETLEQLSQILPPHWSHGNPIDVLGDAGPERFAQALEIVLRDPGSQG 390

Query: 324 ILINIFGGIMRCDVLVKG--ILSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVIT 380
            L+ I       D       ++   +      P++   + GA VD G +++ ++G+    
Sbjct: 391 CLV-ILTPQAMTDPTATAAKVVETWRRSGSRQPILASWMGGALVDAGEQILNQAGIPTYR 449

Query: 381 AIDLDDAAQ 389
             D   AA+
Sbjct: 450 YPD--QAAR 456


>gi|225855840|ref|YP_002737351.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           P1031]
 gi|225725209|gb|ACO21061.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           P1031]
          Length = 420

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 97/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+++      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNITWTDKGVTLGVVVASKGYPLDYSKGVEL 348


>gi|169260959|gb|ACA52185.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 110

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLLDLMTREPDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A      K   I++ + +R  G N
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFEVYADKMKAIDLKIYVRRGGPN 110


>gi|37521338|ref|NP_924715.1| carbamoyl phosphate synthase large subunit [Gloeobacter violaceus
           PCC 7421]
 gi|35212335|dbj|BAC89710.1| carbamoyl phosphate synthetase large chain [Gloeobacter violaceus
           PCC 7421]
          Length = 1083

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + V +     ++  A    + +     +++     GG G G           
Sbjct: 133 KQAMEKIGLAVPRSGFAHTLEEARVVAEEIGSFPLILRPSFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +     IR            G   S  + V VE+ A   +E  L ++ D  +
Sbjct: 182 ---IAYNREEFERMIR-----------VGLDASPTSQVLVEESALGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S      IE            + + P   +T ++   L D  
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRDAA 269


>gi|295100307|emb|CBK97852.1| phosphoribosylamine--glycine ligase [Faecalibacterium prausnitzii
           L2-6]
          Length = 434

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK             IK       V+K+   A G+             
Sbjct: 108 SKDLMKKYGIPTAKYETFDDPAKVMEYIKAEGKYPVVIKADGLALGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + + V   ++EI    ++ K+ G +G   N V VE+  
Sbjct: 155 -GVLICENEEQVAEGVKEI----MLDKKFGASG---NHVVVEEFL 191


>gi|124022033|ref|YP_001016340.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9303]
 gi|123962319|gb|ABM77075.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9303]
          Length = 448

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 96/276 (34%), Gaps = 35/276 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +++  VP   G   +++S   A    K +  P+ ++K+    GGR           
Sbjct: 120 AKATMQQVGVPTVPGSEGLLASPEEAAELAKGMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+ ++   + +     L      +     G+    +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVTTPDQLEN-----LFKAAQGEAEAAFGNP--GLYMEKFIDRPRHVEVQILSD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       I   +    I+   +   ++     + P + +   E   +    +  +G   
Sbjct: 218 RHGN---VIHLGERDCSIQRRHQKLLEESPSPALTPELRLRMGEAAVAAARSINYEGAGT 274

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
           ++        +  F + +  +   +P+  M  G  L      I+  D    +  DIQ LR
Sbjct: 275 VEFLLDRKGDFY-FMEMNTRIQVEHPVTEMVTGIDLIAEQLHIAGGDPISIKQEDIQ-LR 332

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
             + E     E   HN       G I       G G
Sbjct: 333 GHAIECRINAEDSTHNFR--PSPGQITGWLPPGGPG 366


>gi|34592267|gb|AAQ76330.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|34592275|gb|AAQ76334.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
 gi|41353005|gb|AAS01124.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAEG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A +       ++ + + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGVKIYVRRGGPNY 111


>gi|114331392|ref|YP_747614.1| cyanophycin synthetase [Nitrosomonas eutropha C91]
 gi|114308406|gb|ABI59649.1| cyanophycin synthetase [Nitrosomonas eutropha C91]
          Length = 765

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K+LLR   +PV +G +++    A  A   +  P+ V  S    G  G+G F EL    +
Sbjct: 238 KSLLRACGIPVPEGRIVTDPADAWLAAADIGLPVVVKPSD---GNHGRGVFIELSTREE 293


>gi|254776680|ref|ZP_05218196.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 397

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 68/212 (32%), Gaps = 57/212 (26%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VPV +   I+S+   ++  + + GP+ VVK+ +  G  G+            GVR
Sbjct: 103 LESLGVPVPRYAEINSLDELDAFARRVGGPV-VVKA-VRGGYDGR------------GVR 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +              L            G  V     E+   + RE  LS LV R     
Sbjct: 149 MARDPVHAREIAAAFL----------ADGVPV---LAEEQVSLRRE--LSALVAR----- 188

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQA 183
               S  G G     V       I   +I P  G+  +  A        L   L + G  
Sbjct: 189 ----SPFGQGAAWPVVETVQRDGICVQVIAPAPGLGEDLAADAQRLALRLAGELGVVGVL 244

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           F   D +LL +N L +  
Sbjct: 245 AVE----------LFETTDGALL-VNELAMRP 265


>gi|119114530|ref|XP_001238142.1| AGAP010154-PA [Anopheles gambiae str. PEST]
 gi|116118460|gb|EAU76126.1| AGAP010154-PA [Anopheles gambiae str. PEST]
          Length = 164

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 17/123 (13%)

Query: 29  HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88
                    L     VVK       RGK             + V  +L  V + + E +G
Sbjct: 40  QQLVQDNPWLETSPLVVKPDQLIKRRGKLGL----------IAVNKNLAQVKTWVNERMG 89

Query: 89  STLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSGMVAFIASTQGGMDIEEV 146
                ++ G    ++    +E         E Y+ +   RT+  + F    QGG+DI +V
Sbjct: 90  KD---QKIGNATGKLRNFIIEPFVPHKDNEEAYVCIYSHRTADTILFY--HQGGVDIGDV 144

Query: 147 AKD 149
              
Sbjct: 145 DAK 147


>gi|319940352|ref|ZP_08014702.1| phosphoribosylamine-glycine ligase [Streptococcus anginosus
           1_2_62CV]
 gi|319810408|gb|EFW06750.1| phosphoribosylamine-glycine ligase [Streptococcus anginosus
           1_2_62CV]
          Length = 421

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 101/282 (35%), Gaps = 41/282 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A+    S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMKKYGVPTARYETFSDFEKAKSYIEKEGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++++ +    E+L    +  + G +G+RV    +E+      E  L   V+  
Sbjct: 153 -GVVVAETVEAAVEAAHEML----LDNKFGDSGARV---VIEEFLT-GEEFSLFAFVNGD 203

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
              +  +A        ++   +         +  L     E          L+G    +G
Sbjct: 204 KFYIMPMAQDHKRAYDDDKGPNTGGMGAYAPVPHLPASVVETAVETIVKPVLEGM-IAEG 262

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELRDVS 246
                 LY               LI+  +G ++   +++   D         +    D +
Sbjct: 263 RPYIGVLY-------------AGLILTADGPKVIEFNARFG-DPETQVILPRLTS--DFA 306

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           +  +  +E K+ ++++      +G +V   G  +     + L
Sbjct: 307 QNIADILEGKEPDMTWADSGVTLGVVVASEGYPLDYEKGVVL 348


>gi|313896366|ref|ZP_07829919.1| phosphoribosylamine--glycine ligase [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975165|gb|EFR40627.1| phosphoribosylamine--glycine ligase [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 456

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+  V +    A   I+    P  V+K+   A G+             
Sbjct: 103 AKNLMKKYGIPTARYEVFTEAEPARVYIRETGAPT-VIKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  I  I    +     G  G   + V +E+  +      L+   D  
Sbjct: 149 -GVVVAMTEQEALDAIDRI----MEDGSFGAAG---SSVVIEEFMEGEEASLLAFT-DGK 199

Query: 128 SGMVAFIA 135
                  A
Sbjct: 200 VIRPMISA 207


>gi|291550825|emb|CBL27087.1| carbamoyl-phosphate synthase, large subunit [Ruminococcus torques
           L2-14]
          Length = 1067

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 57/208 (27%), Gaps = 50/208 (24%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEECEIPRPTGGTVFTAEEAKEVANRLGYPVLVRPSYVL-GGQGMQIAINDN------ 725

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 +   I  I  I     I       G  +    V DG DIL              
Sbjct: 726 -----DIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGTDILI------------- 767

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-------SEDVASLCDMLELQGQ 182
               +        IE         I    + P   +T       +E    L   L + G 
Sbjct: 768 -PGIM------EHIERAGIHSGDSI---SVYPAQSLTEGAKAKIAEYTRRLAKSLHVIGM 817

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I              + D+ ++E+NP
Sbjct: 818 INIQFI--------VCGEDDVYVIEVNP 837


>gi|160901141|ref|YP_001566723.1| cyanophycin synthetase [Delftia acidovorans SPH-1]
 gi|160366725|gb|ABX38338.1| cyanophycin synthetase [Delftia acidovorans SPH-1]
          Length = 875

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +  V  A    + +  P+ VVK Q   G +GKG    +    + 
Sbjct: 225 KRLLHAAGVPVPLGRPVKDVEEAWLVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTHEQL 281

Query: 69  GVRVESSLK 77
                ++ +
Sbjct: 282 KAAFATASE 290


>gi|34592285|gb|AAQ76339.1| ATP citrate lyase beta [Candidatus Arcobacter sulfidicus]
          Length = 111

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGANV 364
           +G ++ I G I     + K   GI+ A +  +  +  V     +R  G + 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKAVDTKIYVRRGGPHY 111


>gi|242012671|ref|XP_002427052.1| phosphoribosylamine-glycine ligase, putative [Pediculus humanus
           corporis]
 gi|212511302|gb|EEB14314.1| phosphoribosylamine-glycine ligase, putative [Pediculus humanus
           corporis]
          Length = 995

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++++P A+     +   A+  I +   P  VVK+   A G+             
Sbjct: 102 AKQFMKRHDIPTARFGSFQNAQEAKKFILSATFPALVVKASGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S  +   + + +IL      K+ G  G   + V +E+  +     YL+   D  
Sbjct: 149 -GVVVASDKEEASNAVDDIL----TQKKFGDAG---STVVIEELLEGEEVSYLAFT-DGN 199

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 200 TIVPMLPA 207


>gi|167522248|ref|XP_001745462.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776420|gb|EDQ90040.1| predicted protein [Monosiga brevicollis MX1]
          Length = 938

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + K+ +P A+    S+   A + I     P  VVK+   A G+             
Sbjct: 66  AKDFMAKHGIPTARYATFSNADQATAFIDHADFPALVVKASGLAAGK------------- 112

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V           R +L            G   + V +E+
Sbjct: 113 -GVVVAKDRAEAKDAARTMLDGRF--------GEASSSVVIEE 146


>gi|41353059|gb|AAS01151.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D      G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTXADXAGIDDLANYGEYSGGPTTGETKFYAETIFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A +  +  +        +R  G N
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGTKTYVRRGGPN 110


>gi|296139547|ref|YP_003646790.1| CoA-binding protein [Tsukamurella paurometabola DSM 20162]
 gi|296027681|gb|ADG78451.1| CoA-binding domain protein [Tsukamurella paurometabola DSM 20162]
          Length = 903

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LLR Y V V    V S+   A +A   L  P+ V K+ +    R +     +  D  G 
Sbjct: 690 ELLRLYGVEVVPFEVASTPEQAMAAADRLGYPVAV-KA-MGERWRLRADLAAVRLDLTGP 747

Query: 70  VRVESSLKSVISDIREIL 87
             V  +   +     E L
Sbjct: 748 QAVADAFGELAGATGETL 765


>gi|41353019|gb|AAS01131.1| AclB [uncultured prokaryote]
          Length = 111

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADAIADFAGIADLANYGEYCGGPTTGETKFYAETILDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINI-----PLVMRLEGANV 364
           +  ++ I G I     + K   GI+ A +E    +      + +R  G N 
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFEEYADKMKDVGDKIYVRRGGPNY 111


>gi|311104878|ref|YP_003977731.1| cyanophycin synthetase 2 [Achromobacter xylosoxidans A8]
 gi|310759567|gb|ADP15016.1| cyanophycin synthetase 2 [Achromobacter xylosoxidans A8]
          Length = 871

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G ++ S   A  A + +  P+ V
Sbjct: 224 KELLSTCGVPVPEGRLVRSEDDAWEAAEDIGLPVVV 259


>gi|302386008|ref|YP_003821830.1| phosphoribosylamine/glycine ligase [Clostridium saccharolyticum
           WM1]
 gi|302196636|gb|ADL04207.1| phosphoribosylamine/glycine ligase [Clostridium saccharolyticum
           WM1]
          Length = 424

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 40/222 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V  S   A  A         V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAGYEVFDSP-EAALAYLKTASIPIVLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +   + ++ +    ++ K+ G  G   N +  E+         +S+L    
Sbjct: 152 -GVFICNTREEAENGVKAL----MLDKRFGSAG---NRIVAEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
              V  + S Q          G++   +    P   +   +D              D ++
Sbjct: 201 GKTVKIMTSAQDHKRAKDGDQGLNTGGMGTFSPSPFYTEEVDKFCKAYIYQAT--VDAMK 258

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
            +G+       +F  L     +K   +LE N        ++ 
Sbjct: 259 AEGREFKGI--IFFGL--MLTEKGPRVLEYNARFGDPETQVV 296


>gi|291563076|emb|CBL41892.1| carbamoyl-phosphate synthase, large subunit [butyrate-producing
           bacterium SS3/4]
          Length = 1066

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P AKG  + +   A+ A   L  P+ V  S +  G                 
Sbjct: 675 EILEQCQIPRAKGQTVFTAEEAKKAANELGYPVLVRPSYVLGG------------QGMQI 722

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
              +  +   I  I  I     I       G  +    + DG DI
Sbjct: 723 AICDEDIDEFIGIINRIAQEHPILVDKYIMGKEIEVDAICDGTDI 767


>gi|41352967|gb|AAS01105.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A +       +I + + +R  G N
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFENYADKMKEIGVKIYVRRGGPN 110


>gi|116207076|ref|XP_001229347.1| hypothetical protein CHGG_02831 [Chaetomium globosum CBS 148.51]
 gi|88183428|gb|EAQ90896.1| hypothetical protein CHGG_02831 [Chaetomium globosum CBS 148.51]
          Length = 1170

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 70/233 (30%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K     N+P+AK + +++V  A  A   +  P+ V  +    G            
Sbjct: 215 RDLFAKALDEINIPIAKSIAVNTVDEALEAANKIGYPIIVRAAYALGGL----------- 263

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E+   ++ 
Sbjct: 264 ----GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVR 306

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D  +  +          ++E            +++ P   ++ E+          +   L
Sbjct: 307 DANNNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHL 359

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 360 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 411


>gi|320161060|ref|YP_004174284.1| acetyl-CoA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994913|dbj|BAJ63684.1| acetyl-CoA synthetase [Anaerolinea thermophila UNI-1]
          Length = 703

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 2/104 (1%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E +AK +   Y +PV K ++  +   A S  + +  P+ +         +      +
Sbjct: 485 SLTEIEAKQVFALYGLPVTKTLLAKTEDEAVSLAREIGYPVVMKIVSPDILHKSDAGGVK 544

Query: 62  LPADSKGGVRVESSL--KSVISDIREILGSTLITKQTGPTGSRV 103
           +    +  VR        +  +   +     +  ++  P G+ V
Sbjct: 545 VNLKDEQSVREAFRTIMANAKAYKADARIHGIAIQEMAPWGTEV 588


>gi|298504729|gb|ADI83452.1| phosphoribosylamine--glycine ligase [Geobacter sulfurreducens
           KN400]
          Length = 423

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 121/361 (33%), Gaps = 81/361 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY VP A   V + V  A + I  +  P+ VVK+   A G+             
Sbjct: 106 SKDLMKKYQVPTAAYDVFTEVEPAVAFIDRVGVPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  +  + ++L         G  G   + V +E+        +L+      
Sbjct: 152 -GVIIAHTREEAVGAVTDML----SGNAFGDAG---SRVVIEEFLTGEEASFLAFT---D 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
              +  +AS Q          G +   +    P  +    I     V +E +    D + 
Sbjct: 201 GKNIIPLASAQDHKAVFDGDTGPNTGGMGAYSPAPVVTPAIH--DKVMAEVMRRTVDGMA 258

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G+           LY                     G +   D   + + NA +   +
Sbjct: 259 AEGRPYRGV------LY--------------------AGLMINGDQVKTLEFNARFGDPE 292

Query: 239 IQE--LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            Q   +R  S+     +   + +LS I L+ +            A + ++   GG PA++
Sbjct: 293 CQPLLMRMKSDIVPVLLAVARGDLSGIELEWH----------DKAAVCVVMAAGGYPADY 342

Query: 297 L---DVGGGADQDKVAAAFKIITSDSSVKGILIN----IFGGIMRCDVLVKGILSAVKEV 349
               ++ G  D  ++   F      S   G ++     + G       + + I  A + V
Sbjct: 343 RKGDEIRGLEDAARMEDLFVFHAGTSRKDGRIVTSGGRVLGVTALGATVGEAIDRAYRGV 402

Query: 350 K 350
           +
Sbjct: 403 Q 403


>gi|39995717|ref|NP_951668.1| phosphoribosylamine--glycine ligase [Geobacter sulfurreducens PCA]
 gi|39982481|gb|AAR33941.1| phosphoribosylamine--glycine ligase [Geobacter sulfurreducens PCA]
          Length = 423

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 120/358 (33%), Gaps = 81/358 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY VP A   V + V  A + I  +  P+ VVK+   A G+             
Sbjct: 106 SKDLMKKYQVPTAAYDVFTEVEPAVAFIDRVGVPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  +  + ++L         G  G   + V +E+        +L+      
Sbjct: 152 -GVIIAHTREEAVGAVMDML----SGNAFGDAG---SRVVIEEFLTGEEASFLAFT---D 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
              +  +AS Q          G +   +    P  +    I     V +E +    D + 
Sbjct: 201 GKNIIPLASAQDHKAVFDGDTGPNTGGMGAYSPAPVVTPAIH--DKVMAEVMRRTVDGMA 258

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
            +G+           LY                     G +   D   + + NA +   +
Sbjct: 259 AEGRPYRGV------LY--------------------AGLMINGDQVKTLEFNARFGDPE 292

Query: 239 IQE--LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            Q   +R  S+     +   + +LS I L+ +           MA + ++   GG PA++
Sbjct: 293 CQPLLMRMKSDIVPVLLAVARGDLSGIELEWH----------DMAAVCVVMASGGYPADY 342

Query: 297 L---DVGGGADQDKVAAAFKIITSDSSVKGILIN----IFGGIMRCDVLVKGILSAVK 347
               ++ G  D  ++   F      S   G ++     + G       + + I  A +
Sbjct: 343 RKGDEIRGLEDAARMEDLFVFHAGTSRKNGRIVTSGGRVLGVTALGATVGEAIDRAYR 400


>gi|319655025|ref|ZP_08009096.1| phosphoribosylamine-glycine ligase [Bacillus sp. 2_A_57_CT2]
 gi|317393292|gb|EFV74059.1| phosphoribosylamine-glycine ligase [Bacillus sp. 2_A_57_CT2]
          Length = 422

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+  V S+   A++ I+    P+ V+K+   A G+             
Sbjct: 106 AKELMKKYAIPTAEYGVFSNYEEAKAYIEAKGAPI-VLKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +S I E+L +          G   + V +E+  +   E  L   V+  
Sbjct: 152 -GVIVAMTMQEALSGIEELLLNEKF-------GQASSTVVIEEFLE-GEEFSLMAFVNGE 202

Query: 128 SGMVAFIA 135
           + +   IA
Sbjct: 203 TVIPLEIA 210


>gi|94967497|ref|YP_589545.1| carbamoyl-phosphate synthase L chain, ATP-binding [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549547|gb|ABF39471.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Candidatus Koribacter versatilis Ellin345]
          Length = 1862

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 34/216 (15%)

Query: 8   AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK L  K  +PVAK  G  + +V  A +  + L  P+++ K+    GGRG          
Sbjct: 136 AKKLAEKAKIPVAKWSGGPVETVAEAYAHAERLGYPVFI-KASAGGGGRG-------IRQ 187

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  + +   ++  +  G                 V++E   D  R + + ++ D
Sbjct: 188 VNSPAEMARAFEGARNEAFKAFGDP--------------TVFLERRIDGARHVEVQIIAD 233

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           +   +         G     + +   + + +     L       +      +        
Sbjct: 234 QFGTIWPL------GTRDCTLQRRQQKVMEEAPCPVLTPEQDLALRDAAVRMGQTAAYVN 287

Query: 186 DGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNG 217
            G   F  L K     F + +  L   +P+     G
Sbjct: 288 AGTVEFLYLSKTNRMLFMEMNTRLQVEHPVTECTTG 323


>gi|18978210|ref|NP_579567.1| hypothetical protein PF1838 [Pyrococcus furiosus DSM 3638]
 gi|18894021|gb|AAL81962.1| hypothetical protein PF1838 [Pyrococcus furiosus DSM 3638]
          Length = 473

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 35/196 (17%)

Query: 227 SFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDII 286
               +A+++   I    D    +     AK      +     IG + +G G  +   D +
Sbjct: 277 DVIYDAVFKQTGIIRAEDF---EHMFDLAKAFAKCKLPKGDRIGIITDGGGAGVMASDAV 333

Query: 287 KLYGGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
             +G   A                     N  DV G  D ++   A +  T D +V  IL
Sbjct: 334 AKFGLKLAELSEETLRFLREKFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAIL 393

Query: 326 INIFGGIMRCD--VLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAI 382
           + +   +   D   +++ I    K  K + P+V + + G   D   +++ E G+ V    
Sbjct: 394 VIVLFQVPLLDEEEVIEIIADYAK--KSDKPIVAVSMGGYKTDRYAKMLEEKGVPVYPTP 451

Query: 383 DLDDAAQKIVHAVKGV 398
                 ++ V A+ G+
Sbjct: 452 ------ERGVRALAGL 461


>gi|14591547|ref|NP_143629.1| hypothetical protein PH1789 [Pyrococcus horikoshii OT3]
 gi|3258225|dbj|BAA30908.1| 472aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 472

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 45/235 (19%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKI-----------SFDDNALYRHLDIQELRDVS 246
           F +    + +I P+I +K+GR     +K                +A+++   I    D  
Sbjct: 237 FMETAKRVTKIKPIIALKSGRTE-YGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDF- 294

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA------------ 294
             +     AK      +     IG + +G G  +   D +  +G   A            
Sbjct: 295 --EHMFDLAKAFAKCKLPKGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEETIKFLRE 352

Query: 295 ---------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDV--LVKGIL 343
                    N  DV G  D ++   A +  T D +V  IL+ +   +   D   ++  I 
Sbjct: 353 RFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAILLIVLFQVPLLDEEEVINIIT 412

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
              K+    I +V+ + G   D   R++ E G+ V          ++ V A+ G+
Sbjct: 413 DYAKKSDKPI-VVVSMGGYKTDKYARMLEERGIPVYPTP------ERGVRALAGL 460


>gi|50549467|ref|XP_502204.1| YALI0C23969p [Yarrowia lipolytica]
 gi|49648071|emb|CAG82526.1| YALI0C23969p [Yarrowia lipolytica]
          Length = 1133

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 72/225 (32%), Gaps = 45/225 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL R+ ++P A+ + + +V  A  A +++  P+ V  +    G               
Sbjct: 181 AKAL-REIDIPTAESIAVENVDDALKAAESVGYPIIVRSAYALGGL-------------- 225

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++   + +   + L             S    + VE      +E+   ++ DR 
Sbjct: 226 -GSGFANNEDELRNLAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRN 271

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 272 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVV 324

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           G+  +        L Y+   + +  L   + L     G      +
Sbjct: 325 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 368


>gi|118581003|ref|YP_902253.1| phosphoribosylamine--glycine ligase [Pelobacter propionicus DSM
           2379]
 gi|118503713|gb|ABL00196.1| phosphoribosylamine--glycine ligase [Pelobacter propionicus DSM
           2379]
          Length = 423

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+RKYNVP A   V S +  AE+ I     P+ V+K+   A G+             
Sbjct: 106 SKDLMRKYNVPTAAYGVFSDIGEAEAFIDRTGLPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +  +  + ++L         G  G   + V +E+        +L++ 
Sbjct: 152 -GVIIAQTRQEAVDTVTDML----SGNAFGSAG---SRVVIEEFLTGEEASFLAIT 199


>gi|283852914|ref|ZP_06370174.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B]
 gi|283571672|gb|EFC19672.1| CoA-binding domain protein [Desulfovibrio sp. FW1012B]
          Length = 702

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+QA+ +LR YN+P    V+  S   A +    +  P+ +  +      +      ++  
Sbjct: 490 EFQAQEVLRAYNLPTPNTVLARSSDEAVAGADKIGYPVVLKIASPQISHKSDVGGVKVNL 549

Query: 65  DSKGGVRVES 74
                VR   
Sbjct: 550 PDAEAVRNAF 559


>gi|302541484|ref|ZP_07293826.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459102|gb|EFL22195.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces
           himastatinicus ATCC 53653]
          Length = 716

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 19/229 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y +P     +      A      +  P+ +         +       +   S
Sbjct: 32  EGKRITDAYGIPTPAEGLAECADDAVKLADRIGFPVVLKIVSPDISHKTDAGGVRVGLGS 91

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLSLLVD 125
              VR   +     +                   +R+  V V+    D  +E+ +  + D
Sbjct: 92  AAEVRGAYTAIVANARA-------------YDPTARIQGVQVQQMVPDGGQEVIVGAVTD 138

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
            T G V       GG+ +E +     +       D L  +     A +   +   +   R
Sbjct: 139 PTFGKVVAFG--LGGVLVEVLKDITFRLAPASRDDALSMLDGIRAAEVLRGVRGGEPVDR 196

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
               DL   +     D  +++ +++NP+    +G +   D ++   D+A
Sbjct: 197 DALADLIVRVSDLVTDFPEVAEVDLNPVFATGSG-VLAADVRLLLGDDA 244


>gi|219666155|ref|YP_002456590.1| cyanophycin synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219536415|gb|ACL18154.1| cyanophycin synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 885

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS-- 66
           K LL +  +PV  GVV  +   A    + L   L VVK   + G +GKG   +L  ++  
Sbjct: 220 KKLLYEGGIPVPDGVVTRNEDEAVEVFRQLD-RLVVVKP--YNGNQGKGVTLKLGTEAEV 276

Query: 67  KGGVRVESSLKSVISDIREILGST----LITKQTGPTGSRVNCVYVEDGADILREL 118
           +   RV  + +  +     I G      ++  +      R+    + DG   + EL
Sbjct: 277 RAAFRVAQTYEEQVVVEEYIEGKNYRLLVVDGKMAAAAERIPAHVIGDGVSTVGEL 332


>gi|317127155|ref|YP_004093437.1| phosphoribosylamine/glycine ligase [Bacillus cellulosilyticus DSM
           2522]
 gi|315472103|gb|ADU28706.1| phosphoribosylamine/glycine ligase [Bacillus cellulosilyticus DSM
           2522]
          Length = 424

 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 15/83 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++KY++P A   V + V  A++ ++    P+ VVK+   A G+             
Sbjct: 107 AKEIMKKYDIPTAAYEVFTDVEEAKAYVRKQGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V  + +  +  + +I+G+ 
Sbjct: 153 -GVIVAETEEQALVALDDIMGAR 174


>gi|240143309|ref|ZP_04741910.1| carbamoyl-phosphate synthase, large subunit [Roseburia intestinalis
           L1-82]
 gi|257204679|gb|EEV02964.1| carbamoyl-phosphate synthase, large subunit [Roseburia intestinalis
           L1-82]
          Length = 1068

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P A G  + +   A+     L  P+ V  S +  G                G
Sbjct: 673 EILEKTQIPRAAGGTVYTAEEAKEVANRLGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  +   +   I     I     I       G  +    V DG DI
Sbjct: 718 MKIAFNDDEIEEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGTDI 765


>gi|171058635|ref|YP_001790984.1| phosphoribosylamine--glycine ligase [Leptothrix cholodnii SP-6]
 gi|170776080|gb|ACB34219.1| phosphoribosylamine--glycine ligase [Leptothrix cholodnii SP-6]
          Length = 427

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 18/120 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  +R++ +P A     S V AA + +  L  P+ VVK+   A G+             
Sbjct: 106 SKDFMRRHGIPTAAYETFSDVAAAHAYVDRLGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+     +  +L    +       G+RV    +E+  D     ++ ++  R 
Sbjct: 152 -GVVVATTLEEAHQAVDWMLLDNSLGVTHNAGGARV---VIEEFLDGEEASFIVMVDGRN 207


>gi|157143814|emb|CAL47320.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 95

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 12/91 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKII------TSDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+       +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLSGNCSRTANYGEYSGGPTTDETKFYADTVFDLMSRFKDPK 60

Query: 321 VKGILINIFGGIMRCDVLV---KGILSAVKE 348
            +G ++ I G I     +    KGI+ +++E
Sbjct: 61  GRGKILIIGGAIANFTDVAKTFKGIIQSLEE 91


>gi|152981679|ref|YP_001355246.1| cyanophycin synthetase [Janthinobacterium sp. Marseille]
 gi|151281756|gb|ABR90166.1| cyanophycin synthetase [Janthinobacterium sp. Marseille]
          Length = 853

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +++   A  A + +  P+ V+K +   G +GKG    +  + + 
Sbjct: 207 KVLLAAAGVPVPDGASVTTAEEAWQAARDIGAPV-VIKPR--DGNQGKGVAVNMKTEEEV 263

Query: 69  GVRVESSLK 77
                 + +
Sbjct: 264 KTAFAVAYE 272


>gi|326330385|ref|ZP_08196695.1| acetyl/propionyl-CoA carboxylase, alpha subunit [Nocardioidaceae
           bacterium Broad-1]
 gi|325951922|gb|EGD43952.1| acetyl/propionyl-CoA carboxylase, alpha subunit [Nocardioidaceae
           bacterium Broad-1]
          Length = 580

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 40/123 (32%), Gaps = 15/123 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHA-----AESAIKTLPGPLYVVKSQIHAGGRGKG---RF 59
           AK L+ +  VPV  G+VI          AE A   +  PL V K+    GGRG       
Sbjct: 33  AKQLMAEAGVPVLPGIVIDENQEFGADLAERAAGDIGFPLLV-KAAYGGGGRGMRIVESA 91

Query: 60  KELPADSKGGVRVESSLKSVISDIREIL----GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            EL +      R   S     +   E L        +       G  V+    E    I 
Sbjct: 92  DELESTVAAARREAVSAFGNGAVFLERLVIRPRHIEVQVFADSQGQVVH--LFERECSIQ 149

Query: 116 REL 118
           R  
Sbjct: 150 RRY 152


>gi|293604151|ref|ZP_06686559.1| cyanophycin synthase [Achromobacter piechaudii ATCC 43553]
 gi|292817376|gb|EFF76449.1| cyanophycin synthase [Achromobacter piechaudii ATCC 43553]
          Length = 871

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G ++ S   A  A + +  P+ V
Sbjct: 224 KELLSTCGVPVPEGRLVRSEDDAWEAAEDIGLPVVV 259


>gi|194291518|ref|YP_002007425.1| acetyl CoA synthetase; CoA-binding domain; succinyl-CoA synthetase
           domain [Cupriavidus taiwanensis LMG 19424]
 gi|193225422|emb|CAQ71368.1| putative acetyl CoA synthetase; CoA-binding domain; Succinyl-CoA
           synthetase domain [Cupriavidus taiwanensis LMG 19424]
          Length = 728

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 62/233 (26%), Gaps = 25/233 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E++A   L    +P A   +      A     T+  P+ +                 L
Sbjct: 498 LSEFEAMQWLAACGIPTAPHGLARDADEAARIADTIGYPVAI----------KLCSPDIL 547

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV +  +           + +   +  T       +   V        EL + +
Sbjct: 548 HKSDVGGVVLNVADARAARAAFAQVQAAAASHGTPARF---DGALVAGMVRGWGELMVGV 604

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----E 178
                     F      G+    V            + P    T    +    +L     
Sbjct: 605 -----RRDPVFGLVALAGIGGTAVEIFRQTAFGLAPLSPARARTMLRASRAEALLSGHRG 659

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFD 229
                     ++   + +A       L  LEINPLI+   G +   D+ ++  
Sbjct: 660 HPAIDAEAVAEVLVRVSQAAAALGPRLDTLEINPLIVTARG-VVAADAVVTLH 711


>gi|225448255|ref|XP_002269017.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 461

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY +P AK    +   AA+  I+    P+ V+K+   A G+              
Sbjct: 134 KNLCDKYGIPTAKYQTFTDPAAAKQYIQEQGAPI-VIKADGLAAGK-------------- 178

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L      +  +L    +    G  G   + V VE+  +     + +L+
Sbjct: 179 GVIVAMTLDEAYEAVDLML----VKGAFGSAG---SQVIVEEFLEGEEASFFALV 226


>gi|56697539|ref|YP_167907.1| acyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
 gi|56679276|gb|AAV95942.1| acyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
          Length = 697

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 23/221 (10%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            K  LR     V +G  + +    ESA   +  P+ +               +       
Sbjct: 486 GKDWLRGAGCAVPEGRSV-TAREVESAAAEIGFPVAL----------KMMSPRLAHKTEA 534

Query: 68  GGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLSLLVD 125
           G V +  +    + + + ++ G+           +  +   VE  +   L EL L+L  D
Sbjct: 535 GAVALNVADQSELRAALAQMPGAV----AAYDPDALTDRFLVEAMSPPPLAELILTLRRD 590

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQAR 184
              G    + S  GG+ +E +       +   + D   G+        L           
Sbjct: 591 PQFGHALVLGS--GGVLVELLGDAVTLLLPCSVADVQRGLEGLRLAPLLGGYRGRPAADL 648

Query: 185 IDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLD 223
               D    L +A+      +  +EINPL +  + R+  +D
Sbjct: 649 ARIADDIYALTRAYLQDCAEIAEVEINPLFVYPD-RVVAID 688


>gi|315046162|ref|XP_003172456.1| carbamoyl-phosphate synthase subunit arginine-specific large
           [Arthroderma gypseum CBS 118893]
 gi|311342842|gb|EFR02045.1| carbamoyl-phosphate synthase subunit arginine-specific large
           [Arthroderma gypseum CBS 118893]
          Length = 1190

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ + +S+V  A  A   +  P+ V  +    G               
Sbjct: 237 AKAL-NEINIPIAESIAVSTVDDALEAAGKIGYPIIVRSAYALGGL-------------- 281

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++   +       L             +    + VE      +E+   ++ D +
Sbjct: 282 -GSGFANNPDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAS 327

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 328 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 380

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 381 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 429


>gi|289192037|ref|YP_003457978.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Methanocaldococcus sp. FS406-22]
 gi|288938487|gb|ADC69242.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Methanocaldococcus sp. FS406-22]
          Length = 491

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 38/188 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N PV K   ++SV  A    + +  P+ V  +    G            
Sbjct: 126 RELFAEAMAEINEPVTKCKAVNSVDEAIEFAEEIGYPVIVRPAFTLGG------------ 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + ++    + L  ++           ++ V +++     +E  L ++ 
Sbjct: 174 -TGGGI--AHNKEELMDIASKGLKYSI-----------IHQVLIDESVLGWKEFELEVMR 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQ 180
           DR    +       G  +I+ +     + I    I    D            +   L ++
Sbjct: 220 DRKDTCIIV----CGMENIDPMGIHTGESIVVSPIQTLPDEFYQKLRNAAIKIIRHLGIE 275

Query: 181 GQARIDGG 188
           G   I   
Sbjct: 276 GGCNIQFA 283


>gi|89892892|ref|YP_516379.1| hypothetical protein DSY0146 [Desulfitobacterium hafniense Y51]
 gi|89332340|dbj|BAE81935.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 885

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS-- 66
           K LL +  +PV  GVV  +   A    + L   L VVK   + G +GKG   +L  ++  
Sbjct: 220 KKLLYEGGIPVPDGVVTRNEDEAVEVFRQLD-RLVVVKP--YNGNQGKGVTLKLGTEAEV 276

Query: 67  KGGVRVESSLKSVISDIREILGST----LITKQTGPTGSRVNCVYVEDGADILREL 118
           +   RV  + +  +     I G      ++  +      R+    + DG   + EL
Sbjct: 277 RAAFRVAQTYEEQVVVEEYIEGKNYRLLVVDGKMAAAAERIPAHVIGDGVSTVGEL 332


>gi|291536829|emb|CBL09941.1| carbamoyl-phosphate synthase, large subunit [Roseburia intestinalis
           M50/1]
 gi|291539132|emb|CBL12243.1| carbamoyl-phosphate synthase, large subunit [Roseburia intestinalis
           XB6B4]
          Length = 1068

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P A G  + +   A+     L  P+ V  S +  G                G
Sbjct: 673 EILEKTQIPRAAGGTVFTAEEAKEVANRLGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  +   +   I     I     I       G  +    V DG DI
Sbjct: 718 MKIAFNDDEIEEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGTDI 765


>gi|166367783|ref|YP_001660056.1| carbamoyl phosphate synthase large subunit [Microcystis aeruginosa
           NIES-843]
 gi|166090156|dbj|BAG04864.1| pyrimidine-specific carbamoyl-phosphate synthase large chain
           [Microcystis aeruginosa NIES-843]
          Length = 1081

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      VPV    + +++  A++    +     +++     GG G G       
Sbjct: 129 RELFKKAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +                 Q G   S  + + VE      +E  L ++ 
Sbjct: 182 -------IAYNQEEFEPMA-----------QYGLDCSPTSQILVEKSLIGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE            + + P   +T ++   L D
Sbjct: 224 D-LADNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|156938186|ref|YP_001435982.1| carbamoyl phosphate synthase large subunit [Ignicoccus hospitalis
           KIN4/I]
 gi|156567170|gb|ABU82575.1| carbamoyl-phosphate synthase large subunit [Ignicoccus hospitalis
           KIN4/I]
          Length = 1047

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 30/129 (23%)

Query: 9   KALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           K L     ++  +P+      S+V  A    + L  P+ V   +I     GKG F     
Sbjct: 126 KTLFAKTMKENGIPMPPSEAASNVDEALEIAERLGYPVIV---RIAFTLGGKGSF----- 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +   +      +            V  V VE      +E+   ++ 
Sbjct: 178 -------IAWNRRELEKWVVRAFAQSA-----------VGRVLVEKYLHHWKEIEFEVVR 219

Query: 125 DRTSGMVAF 133
           D  +  VA 
Sbjct: 220 DAYNNSVAV 228


>gi|145588855|ref|YP_001155452.1| cyanophycin synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047261|gb|ABP33888.1| cyanophycin synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 856

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    V V  G V+++   A  A + + GP+ V+K              +     KG
Sbjct: 209 KNLLAAAGVSVPIGEVVTNADDAWRAAQKIGGPI-VLKP-------------KDGNQGKG 254

Query: 69  GVRVESSLKSVIS--DIREILGSTLITKQTGP 98
            V    + + V +  ++ +  G   I ++  P
Sbjct: 255 VVANIQTEEEVRAGFEVTQGFGRETIVERYLP 286


>gi|304384993|ref|ZP_07367339.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Pediococcus acidilactici DSM 20284]
 gi|304329187|gb|EFL96407.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Pediococcus acidilactici DSM 20284]
          Length = 386

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 5/127 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E   K  L  +++PV     +S+      AI  L  P  ++KS    G  G G+    
Sbjct: 113 LRE---KHFLASHDLPVTPYQPVSNPTELNDAITKLGYPC-ILKS-CEGGYDGHGQQDIN 167

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D     R  +S    I + R+     L    T     +V C  V +       L+ S+
Sbjct: 168 SEDDLPAGRSLASQTPCILEKRQKFSKELSVMVTRSRDGQVRCFPVAENIHHNHILHQSI 227

Query: 123 LVDRTSG 129
           +  R + 
Sbjct: 228 VPARVTK 234


>gi|302878823|ref|YP_003847387.1| cyanophycin synthetase [Gallionella capsiferriformans ES-2]
 gi|302581612|gb|ADL55623.1| cyanophycin synthetase [Gallionella capsiferriformans ES-2]
          Length = 720

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G ++ +   A  A + +  P+ V
Sbjct: 219 KTLLSACGVPVPEGRIVDNPADAWEAAEDIGLPVVV 254


>gi|167631118|ref|YP_001681617.1| phosphoribosylamine--glycine ligase [Heliobacterium modesticaldum
           Ice1]
 gi|167593858|gb|ABZ85606.1| phosphoribosylamine--glycine ligase [Heliobacterium modesticaldum
           Ice1]
          Length = 439

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 59/187 (31%), Gaps = 32/187 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL-------PGPLYVVKSQIHAGGRGKGRFK 60
           AK L+RKY++P A   V + +  A   I  L        G   VVK+   A G+      
Sbjct: 114 AKDLMRKYDIPTAAYGVFTEIEPAFQFIDKLAAARPVEAGCPCVVKADGLAAGK------ 167

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   GV V + +      +R +L         G  G RV    +E+  +      +
Sbjct: 168 --------GVIVAADVAEAKEAVRSML----KGNAFGDAGRRV---VIEEFLEGEE---V 209

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           S+L       V  + S Q    I +     P         P    T      +   + L 
Sbjct: 210 SILAFTDGDHVLPMVSAQDHKRIFD-GDQGPNTGGMGAYSPAPVYTEALAREVEKTVLLP 268

Query: 181 GQARIDG 187
               +  
Sbjct: 269 TIQAMKA 275


>gi|157382734|gb|ABV48805.1| ATP citrate lyase beta subunit [enrichment culture clone RaclB16]
          Length = 112

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDEK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGANV 364
            +  ++ I G I       K   GI+ A ++       + + + +R  G N 
Sbjct: 61  GRDKILIIGGAIANFTDAAKTFTGIIQAFEKYADKMKDVGVRIYVRRGGPNY 112


>gi|134096474|ref|YP_001101549.1| cyanophycin synthetase [Herminiimonas arsenicoxydans]
 gi|133740377|emb|CAL63428.1| putative Cyanophycin synthetase [Herminiimonas arsenicoxydans]
          Length = 722

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+   VPV +G +++S   A  A +++  P+ V+K      GRG        AD + 
Sbjct: 224 KTLLQSCGVPVPEGRIVNSAADAWEAAESIGLPV-VIKPLDGNHGRGVSTNLNTAADIEA 282

Query: 69  GVRVES 74
              +  
Sbjct: 283 AFLLAE 288


>gi|253745065|gb|EET01173.1| Acetyl-CoA synthetase [Giardia intestinalis ATCC 50581]
          Length = 715

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 80/244 (32%), Gaps = 50/244 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            +   Y V   K  + ++   A    K +  P+   +V  QI            +     
Sbjct: 495 EIFTLYGVNAPKTKLATNEADAAKFAKEVTFPVVMKIVSPQI------------IHKSDC 542

Query: 68  GGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-----ELYLS 121
           GGV++   +     +  +EI+ +     + GP G+ +  V ++   D  +     E+ + 
Sbjct: 543 GGVKLNIKTEAEATAAYKEIMAN---AAKNGPKGAVLKGVEIQQMVDFSKYQKTTEMIVG 599

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  D  +     +   QGG+        Y   I  +  D       ED            
Sbjct: 600 VNRD-PTWGPMIMV-GQGGI--------YANYIKDVAFDLAYKYDREDAEEQLKRTKVYD 649

Query: 178 ------ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR------LRVLDS 224
                            D    L +   D  +++ L++NPL++ +  +      +  +D 
Sbjct: 650 ILNGVRGQPRSDISGLLDTMVKLAQLVNDFPEITELDMNPLLVFEEQKDGKNPGIAAVDV 709

Query: 225 KISF 228
           KI+ 
Sbjct: 710 KITL 713


>gi|163752043|ref|ZP_02159252.1| acetyltransferase, GNAT family protein [Shewanella benthica KT99]
 gi|161328095|gb|EDP99264.1| acetyltransferase, GNAT family protein [Shewanella benthica KT99]
          Length = 896

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 15/139 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++++ +L  Y +      V    H+A    + +  P+  +K Q               +D
Sbjct: 498 HESQEILSAYGLKTIDTYVAQDPHSAAEIAQNIGYPV-ALKVQ--------SPDIRHKSD 548

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYLSLLV 124
             G +   SS + VI     I    L +       G  V  + +  G    +E+ ++++ 
Sbjct: 549 VHGVMLNLSSKEEVIQAAIAIKERVLSSHPDARIEGLLVQKMALTAG---AQEIRVAVIN 605

Query: 125 DRTSGMVAFIASTQGGMDI 143
           D   G    +   +GG + 
Sbjct: 606 DPVFGPAILLG--EGGSEW 622


>gi|225163608|ref|ZP_03725915.1| carbamoyl-phosphate synthase, large subunit [Opitutaceae bacterium
           TAV2]
 gi|224801776|gb|EEG20065.1| carbamoyl-phosphate synthase, large subunit [Opitutaceae bacterium
           TAV2]
          Length = 1133

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 51/163 (31%), Gaps = 36/163 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + VA+   + S+ AA +A + +     +++     GG G G       
Sbjct: 129 RELFKQAMLKIGLDVARSRTVKSMDAARAAAEEIGNYPLIIRPSFTLGGSGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +     +   L  +            V+ V VE+     +E  + ++ 
Sbjct: 182 -------IAYNKEEFEQIVANGLDLS-----------PVHEVLVEECLLGWKEYEMEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           D     V           IE            + + P + +T 
Sbjct: 224 DHKDQCVVI-------CSIENFDPMGVHTGDSITVAPAMTLTD 259


>gi|260429868|ref|ZP_05783844.1| CoA-binding domain protein [Citreicella sp. SE45]
 gi|260419351|gb|EEX12605.1| CoA-binding domain protein [Citreicella sp. SE45]
          Length = 679

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 33/230 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AKALL+ + V V           A      +  P+ +           KG       
Sbjct: 479 EAEAKALLQTFGVRVPGSGRAGEAGQAAETATQIGFPVVL-----------KGEGIAHKT 527

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           ++   V   SS ++V     ++                     VE+     + EL L + 
Sbjct: 528 EAGAVVLNLSSAQAVAEAAAKM---------------PAESFLVEEMITGTVAELILGVT 572

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQ 182
            D   G V  +    GG+  E +       I     D    + S      L       G 
Sbjct: 573 RDPAHGFVLTLG--LGGILTELIRDTASVLIPASREDIGAALQSLRTAPLLTGYRGRPGA 630

Query: 183 ARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFDD 230
                 D    L +   +   +L  +EINPLI      +   D+ I  ++
Sbjct: 631 DIEAVIDTAMALQQLVQEHAGALHEVEINPLICRATDAV-AADALIRMEE 679


>gi|225016827|ref|ZP_03706019.1| hypothetical protein CLOSTMETH_00739 [Clostridium methylpentosum
           DSM 5476]
 gi|224950401|gb|EEG31610.1| hypothetical protein CLOSTMETH_00739 [Clostridium methylpentosum
           DSM 5476]
          Length = 466

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +R+  VPV  G   V++ +  A+     +  P+ V K+    GGRG  +       
Sbjct: 138 AKQTMRRAGVPVVPGSDGVVTDIEEAKKIAAQIGYPVMV-KASAGGGGRGIRK------- 189

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               V  E  L+S ++  +    S             VN  +VE
Sbjct: 190 ----VDDERELESAMTAAKTEALSFFGDDGVYIEKFIVNPRHVE 229


>gi|197119819|ref|YP_002140246.1| phosphoribosylamine--glycine ligase [Geobacter bemidjiensis Bem]
 gi|197089179|gb|ACH40450.1| phosphoribosylamine--glycine ligase [Geobacter bemidjiensis Bem]
          Length = 423

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KYNVP A   V + V  A S I     P+ V+K+   A G+             
Sbjct: 106 SKDLMHKYNVPTAAYGVFTEVEPAVSFIDQTGIPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +    ++ + ++L         G  G   + V +E+        +L+      
Sbjct: 152 -GVIIAQTRDEAVAAVTDML----SGNAFGAAG---SRVVIEEFLKGEEASFLAFT---D 200

Query: 128 SGMVAFIASTQG 139
              +  +AS Q 
Sbjct: 201 GERIIPLASAQD 212


>gi|82703369|ref|YP_412935.1| cyanophycin synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411434|gb|ABB75543.1| Cyanophycin synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 746

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KALL+   V + +G ++ S   A  A + +  P+ +       G  G+G F EL    + 
Sbjct: 241 KALLQSCGVAIPEGRIVHSAEDAWEAAQEIGLPVVIKPCD---GNHGRGVFIELSKREEI 297

Query: 69  GVRVESSLKS 78
                 +L+ 
Sbjct: 298 ESAYRVALEE 307


>gi|71909843|ref|YP_281393.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS5005]
 gi|71852625|gb|AAZ50648.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS5005]
          Length = 451

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 137 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 182

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 183 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 220


>gi|294141080|ref|YP_003557058.1| GNAT family acetyltransferase [Shewanella violacea DSS12]
 gi|293327549|dbj|BAJ02280.1| acetyltransferase, GNAT family [Shewanella violacea DSS12]
          Length = 896

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 16/145 (11%)

Query: 2   NIHE-YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            I E ++++ +L  Y +      V    H+A    + +  P+  +K Q            
Sbjct: 493 KILETHESQEILSAYGLKTIDTYVAQDPHSAAEIAQNVGYPV-ALKVQ--------SPDI 543

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELY 119
           +  +D  G +   S+ + V+     I    L         G  V  + +  G    +E+ 
Sbjct: 544 QHKSDVHGVMLNLSTKEEVMQAAIAIKERVLSANPDARIEGLLVQKMALTAG---AQEIR 600

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIE 144
           ++++ D   G    +   +GG + E
Sbjct: 601 VAVINDPVFGPAILLG--EGGSEWE 623


>gi|296806225|ref|XP_002843922.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Arthroderma otae CBS 113480]
 gi|238845224|gb|EEQ34886.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Arthroderma otae CBS 113480]
          Length = 1166

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 69/225 (30%), Gaps = 45/225 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL ++ ++P+A+ + +S+V  A  A   +  P+ V         R       L +   
Sbjct: 213 AKAL-KEIDIPIAESIAVSTVDDALEAASKIGYPIIV---------RSAYALGGLGSGFA 262

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G         +       L             +    + VE      +E+   ++ D +
Sbjct: 263 NG------PDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAS 303

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 304 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 356

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           G+  +        L Y+   + +  L   + L     G      +
Sbjct: 357 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 400


>gi|188578856|ref|YP_001915785.1| phosphoribosylamine--glycine ligase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188523308|gb|ACD61253.1| phosphoribosylamine--glycine ligase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 429

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + V AA + ++    P+ VVK+   A G+             
Sbjct: 108 AKDFLARHGIPTAYYAVHTDVDAALAYVREKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L      +R++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVATTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|163857299|ref|YP_001631597.1| Acetyl-CoA synthetase [Bordetella petrii DSM 12804]
 gi|163261027|emb|CAP43329.1| Acetyl-CoA synthetase [Bordetella petrii]
          Length = 1113

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 70/221 (31%), Gaps = 24/221 (10%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKE 61
           HE +A  +LR   +PV       S   A    + L  P+   VV + I            
Sbjct: 482 HEAEALQVLRDSGLPVTPARHAQSRDEALRHARALGFPVVMKVVSADI-----------T 530

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             +D  G V       +       IL +            R   V V        E  L 
Sbjct: 531 HKSDVGGVVLDIRDEDAAAHAYDRILAAVAKAAPQA----RTQGVLVAPMVRGGVECILG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE--DVASLCDMLEL 179
              D   G V  + +  GG+++E +  D   ++  + I+    +  E    A L      
Sbjct: 587 ARRDPVLGPVVMVGA--GGVNVELLG-DVALRLAPVTIEQAREMIGELKAAALLRGFRGA 643

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGR 218
                    +    L +       +L  +E+NPL ++  G+
Sbjct: 644 PAADVAALAEAIVRLSRFAMAAGDTLDSVELNPLAVLPEGQ 684


>gi|159028776|emb|CAO89947.1| cphA [Microcystis aeruginosa PCC 7806]
          Length = 877

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 11/100 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +PV +G VI  +    +AI+ + G   V+K      GRG             
Sbjct: 224 KTILKDGGIPVPRGTVIQYLDELSAAIEEVGGFPIVIKPLDGNHGRGISI---------- 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
            V+ +   +           +  +  +    GS  + + V
Sbjct: 274 DVKTQQEAEEAYDLASAASKTRSVIVERYYKGSD-HRILV 312


>gi|218674049|ref|ZP_03523718.1| CoA-binding domain protein [Rhizobium etli GR56]
          Length = 438

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 11/84 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AKA L    +PV +G+   S   A    + L  P+ +           KG     
Sbjct: 233 LTEADAKAELAACGLPVPRGLQAFSPREAAEQAERLGFPVVL-----------KGLGIAH 281

Query: 63  PADSKGGVRVESSLKSVISDIREI 86
             ++         +++V     E+
Sbjct: 282 KTEAGAVALNLWDIEAVSKAAAEM 305


>gi|94989539|ref|YP_597639.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS10270]
 gi|94543047|gb|ABF33095.1| Phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS10270]
          Length = 470

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 156 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 201

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 202 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 239


>gi|58580160|ref|YP_199176.1| phosphoribosylamine--glycine ligase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84622160|ref|YP_449532.1| phosphoribosylamine--glycine ligase [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|58424754|gb|AAW73791.1| phosphoribosylamine-glycine ligase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84366100|dbj|BAE67258.1| phosphoribosylamine-glycine ligase [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 429

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + V AA + ++    P+ VVK+   A G+             
Sbjct: 108 AKDFLARHGIPTAYYAVHTDVDAALAYVREKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L      +R++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVATTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|298675345|ref|YP_003727095.1| carbamoyl-phosphate synthase large subunit [Methanohalobium
           evestigatum Z-7303]
 gi|298288333|gb|ADI74299.1| carbamoyl-phosphate synthase, large subunit [Methanohalobium
           evestigatum Z-7303]
          Length = 1076

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 53/220 (24%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++        V +   ISS+  AE  I  L  PL V  +    G            
Sbjct: 130 RELFKEKMGDIGEKVPQSKAISSLKEAEEMIDELGLPLIVRPAYTLGG------------ 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  + + +   +   L  +           R++ V VE+     +E    ++ 
Sbjct: 178 ---AGGGIAHTKEQLFEIVERGLRRS-----------RIHQVLVEESVLGWKEFEYEVM- 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
            R S     I       D   +     + I   ++ P   ++ E+         ++    
Sbjct: 223 -RDSNDTCVIICNMENFDP--MGIHTGESI---VVTPSQTLSDEEHQMLRSSAINIIRSF 276

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++G   I           A  D D  ++E+NP +   + 
Sbjct: 277 GIEGGCNIQF---------AVKDGDYRVVEVNPRVSRSSA 307



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 44/205 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           AL+++  +    G    S   A +    +  P+ V  S +  G                 
Sbjct: 677 ALMKELGINQPDGRYALSQGEAINFATEIGYPVLVRPSYVLGG---------------RA 721

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +    + +   +RE   S  ++K         N + ++D  +   E+ +  + D  + 
Sbjct: 722 MEIVYDEEELKRYLRE---SVCVSKD--------NPILIDDFLEGAVEIDVDAVCDGENV 770

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV----ASLCDMLELQGQARI 185
           ++  I        IEE           +    L   T E V      +   L+++G   I
Sbjct: 771 LIGAIM-----EHIEEAGVHSGDSACVIPPQSLTEETMEIVRDYTRKIALSLDVKGLINI 825

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINP 210
                         D ++ +LE NP
Sbjct: 826 QMAK---------RDGEVYVLEANP 841


>gi|159037751|ref|YP_001537004.1| hypothetical protein Sare_2148 [Salinispora arenicola CNS-205]
 gi|157916586|gb|ABV98013.1| protein of unknown function DUF201 [Salinispora arenicola CNS-205]
          Length = 414

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 11/118 (9%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VPV +  ++ SV  A +       P  ++K  + AG     R  +  A  +  V+  + 
Sbjct: 118 GVPVPRYRLVESVGEALAGGAEFGYP-LIIKPTMGAGSHFVFRVDDARALERRYVQAAAG 176

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCV-----YVEDGADILRELYLSLLVDRTS 128
           ++ +     E  G  L     GP G  V        Y+ +      ELYL  +VDR +
Sbjct: 177 IQDMFWATSEADGIDL-----GPQGLLVESFLDGREYLIEALAWDDELYLGSVVDRIT 229


>gi|94993426|ref|YP_601524.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS10750]
 gi|94546934|gb|ABF36980.1| Phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS10750]
          Length = 470

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 156 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 201

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 202 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 239


>gi|326202902|ref|ZP_08192769.1| cyanophycin synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986979|gb|EGD47808.1| cyanophycin synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 893

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL   N+PV  GVV+ +   A  A   +  P  V+K       +GKG    + ++ K 
Sbjct: 219 KKLLTDNNIPVPYGVVVRTEQEAFEAAAKVGFP-LVIKP--IDSNQGKGVTVNICSEDK- 274

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTG 97
            ++V  S        ++++    +  +  
Sbjct: 275 -IKVAFS--EARKYSKKVIVERFVCGRDY 300


>gi|108762179|ref|YP_632744.1| acetyltransferase [Myxococcus xanthus DK 1622]
 gi|108466059|gb|ABF91244.1| acetyltransferase, GNAT family [Myxococcus xanthus DK 1622]
          Length = 916

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 25/233 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY++K LL  Y +P  +  +  +  AA +    L  P+ VVK                
Sbjct: 514 LTEYESKKLLAAYGIPTVETRLAVTEDAAVAEAAALGFPV-VVKLH---------SLTVT 563

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGVR+       +      + + L   +    G   + V V+    +   EL L 
Sbjct: 564 HKTDVGGVRLNLPDAESVRAAFRDIRTRL---EALGQGRAFDGVTVQPMVRLDGYELILG 620

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
             VD   G V    +  GG  +E       + +    ++  +     +   + + L    
Sbjct: 621 SSVDAQFGPVLLFGA--GGTLVEVFRD---RALGLPPLNTTLARRMMEQTRIYEALKGVR 675

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISFD 229
                       L     +   ++     ++INPL+     RL  LD+++   
Sbjct: 676 GRPPVDLKALEQLMVRFSQLVAEQRFVKEVDINPLLASPE-RLLALDARVVLH 727


>gi|15838570|ref|NP_299258.1| phosphoribosylamine--glycine ligase [Xylella fastidiosa 9a5c]
 gi|20139817|sp|Q9PC09|PUR2_XYLFA RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|9107084|gb|AAF84778.1|AE004017_1 glycinamide ribonucleotide synthetase [Xylella fastidiosa 9a5c]
          Length = 437

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+  V ++V AA S ++    P+ V+K+   A G+             
Sbjct: 108 AKDFLARHGIPTARYAVHTNVDAAISDVRQQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + IR++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTVTEAEAAIRDML----SGNAFGHAGARV---VIEEYLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|166365487|ref|YP_001657760.1| cyanophycin synthetase [Microcystis aeruginosa NIES-843]
 gi|166087860|dbj|BAG02568.1| cyanophycin synthetase [Microcystis aeruginosa NIES-843]
          Length = 877

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 11/100 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +PV +G VI  +    +AI+ + G   V+K      GRG             
Sbjct: 224 KTILKDGGIPVPRGTVIQYLDELSAAIEEVGGFPIVIKPLDGNHGRGISI---------- 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
            V+ +   +           +  +  +    GS  + + V
Sbjct: 274 DVKTQQEAEEAYDLASAASKTRSVIVERYYKGSD-HRILV 312


>gi|50913424|ref|YP_059396.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS10394]
 gi|50902498|gb|AAT86213.1| Phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS10394]
          Length = 470

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 156 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 201

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 202 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 239


>gi|296273306|ref|YP_003655937.1| phosphoribosylamine/glycine ligase [Arcobacter nitrofigilis DSM
           7299]
 gi|296097480|gb|ADG93430.1| phosphoribosylamine/glycine ligase [Arcobacter nitrofigilis DSM
           7299]
          Length = 422

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 21/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+KYN+P A  +  S+ + A S I  +     VVK+     G+              
Sbjct: 104 KNILKKYNIPTAAFIETSNENEAHSFIDNMKNTPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S       + ++L      +  G  G   NCV VE+  D
Sbjct: 150 GVIIAQSKDEAKQAVSDML----SGESFGDAG---NCVVVEEFLD 187


>gi|239825835|ref|YP_002948459.1| phosphoribosylamine--glycine ligase [Geobacillus sp. WCH70]
 gi|239806128|gb|ACS23193.1| phosphoribosylamine/glycine ligase [Geobacillus sp. WCH70]
          Length = 430

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 39/201 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++KY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKEMMKKYGIPTAEHATFTSYEEAKAYVEKKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L   +  +  +    ++ K+ G        V +E+  +   E      V   
Sbjct: 152 -GVIVAATLPEAMEALSAM----MVEKRFGEASK---QVVIEEYLE-GEEFSFMAFVHGE 202

Query: 128 SGMVAFIASTQ------------GGMD----IEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
                 IA               GGM     + +++          +I P+    + +  
Sbjct: 203 RVYPMVIAQDHKRAYDNDQGPNTGGMGAYSPVPQISAQTIDAALSQIIKPMAKAMAAEGR 262

Query: 172 SLCDMLELQGQARIDGGDLFP 192
               +L     A   G  +  
Sbjct: 263 PFTGVLYAGLMATKQGPKVIE 283


>gi|77361528|ref|YP_341103.1| acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876439|emb|CAI87661.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 888

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 86/251 (34%), Gaps = 29/251 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA  +L  Y +   +  V  +   A+     L  P+ +         +         ++
Sbjct: 492 HQASQILSHYGIECIQTEVAYTPTEAKEQAIELGFPVAL---------KLISPSIPSKSE 542

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYLSLLV 124
             G V   +  + V      +L     T       G  +    +   A    EL +++  
Sbjct: 543 VGGVVLNLNDAQEVEQTAFSMLLRIKNTYPDAIIDGFSLQK--MAPRAG-ANELRIAIKT 599

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +   G V  +     G++  + A   P             +    +A+  D   L+ +  
Sbjct: 600 EPNFGPVILLGEAGTGLEYAQAAVALPPLNMN--------LAKYLIAAAHDKGVLKDRIL 651

Query: 185 IDGGD------LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
            +  D      L   + +   D+ D+S LE+NP I+  NG+  VLD+ ++ +   +  H 
Sbjct: 652 PEKVDKYRLCALLTRISQLVIDQPDISSLELNP-ILASNGQFLVLDATMTINRYRVQTHR 710

Query: 238 DIQELRDVSEE 248
               +R    E
Sbjct: 711 KRLSIRPYPIE 721


>gi|328951075|ref|YP_004368410.1| Phosphoribosylamine--glycine ligase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328451399|gb|AEB12300.1| Phosphoribosylamine--glycine ligase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 422

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +Y +P A+  V      A   I+ +  P+ VVK    A G+G     +L    +
Sbjct: 105 AKTLMERYGIPTARYRVFHEPLEALEYIEAVGVPI-VVKDSGLAAGKGVTVATDLHQAKQ 163

Query: 68  GGVRVESSLKSV---ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
               +             + E L  T +T      G  +  +      D  R
Sbjct: 164 AVANILGHPDEAGRGEVVVEEYLEGTEVTVLALTDGETIKPLL--PSQDHKR 213


>gi|165940729|gb|ABY75264.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 110

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +G ++ I G I     + K   GI+ A +       ++ + + +R  G N
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVGVKIHVRRGGPN 110


>gi|28894939|ref|NP_801289.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes SSI-1]
 gi|28810184|dbj|BAC63122.1| putative phosphoribosylamine-glycine ligase [Streptococcus pyogenes
           SSI-1]
          Length = 451

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 137 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 182

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 183 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 220


>gi|119480925|ref|XP_001260491.1| carbamoyl-phosphate synthase, large subunit [Neosartorya fischeri
           NRRL 181]
 gi|119408645|gb|EAW18594.1| carbamoyl-phosphate synthase, large subunit [Neosartorya fischeri
           NRRL 181]
          Length = 1175

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ + +++V  A  A +T+  P+ V  +    G                G  
Sbjct: 228 LKEINIPIAESIAVNTVDEALKAAETVGYPIIVRSAYALGGL---------------GSG 272

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + + + +     L             +    + VE      +E+   ++ D  +  +
Sbjct: 273 FAENPEELKNLASRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAANNCI 319

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 320 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 372

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 373 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 417


>gi|187920449|ref|YP_001889481.1| CoA-binding domain-containing protein [Burkholderia phytofirmans
           PsJN]
 gi|187718887|gb|ACD20110.1| CoA-binding domain protein [Burkholderia phytofirmans PsJN]
          Length = 704

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 17/122 (13%)

Query: 2   NIHEYQAKALLRKYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++E QAK L  ++ + PV +  ++S    A++A +   G + V+K             +
Sbjct: 480 SLNEAQAKTLFSRFGITPV-RERIVSDASEAKAAAQEFGGKV-VLK---------LLSNE 528

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                  GGV V  S++++ + +  +            TG+  N   V++      EL  
Sbjct: 529 ITHKSEVGGVAVGLSVETIEARLERM-----RDDVHTATGTVPNAFLVQEMVTGGVELIF 583

Query: 121 SL 122
            L
Sbjct: 584 GL 585


>gi|41353039|gb|AAS01141.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADXAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A +       +I + + +R  G N
Sbjct: 61  REKILIIGGAIANFTXVAKTFTGIIQAFENYADKMKEIGVKIYVRRGGPN 110


>gi|317486072|ref|ZP_07944924.1| phosphoribosylamine-glycine ligase [Bilophila wadsworthia 3_1_6]
 gi|316922668|gb|EFV43902.1| phosphoribosylamine-glycine ligase [Bilophila wadsworthia 3_1_6]
          Length = 423

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 24/125 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++K  VP A   V + + AA+S ++    P+ V+K+   A G+             
Sbjct: 106 AKDIMQKAGVPTAACGVFTELEAAKSFVEEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  + +I+G        G  G   + V +E+   +  E+ L    D  
Sbjct: 152 -GVVVAQTKEEALEALDQIMGGVF-----GAAG---SRVVIEEFL-VGEEVSLLAFCDGK 201

Query: 128 SGMVA 132
           + +  
Sbjct: 202 TALPL 206


>gi|291549180|emb|CBL25442.1| acetyl-CoA synthetase (ADP-forming) alpha subunit /branched-chain
           acyl-CoA synthetase (ADP-forming) alpha subunit
           [Ruminococcus torques L2-14]
          Length = 469

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 29/156 (18%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYG------------------------GAPANFLDVGGGA 303
           NI  + NG G  + + D  +  G                        G+P N +D+ G A
Sbjct: 308 NIVMITNGGGSGLLSCDHFERRGMPMHELAEISPNLAGRIRAYMPMFGSPLNPVDISGTA 367

Query: 304 DQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVK-INIPLVMRLEG 361
              +   AF  +  D +V GIL +I    +     +   ++   +  K +  P +M  +G
Sbjct: 368 SPVQYKGAFTQVMRDPNVHGILGSICPTAVTDVPAVTNLVIDIYETYKHLGKPFIMECQG 427

Query: 362 ANV-DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
                     + + G+        + A   +V   K
Sbjct: 428 GEECQEAIMKLRDHGIPAYPTA--EQAVNAMVALYK 461


>gi|111022681|ref|YP_705653.1| acid--CoA ligase [Rhodococcus jostii RHA1]
 gi|110822211|gb|ABG97495.1| probable acid--CoA ligase [Rhodococcus jostii RHA1]
          Length = 687

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 24/216 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ LL +  V    G V+ +   A      L  P +V+K+   +    K     +     
Sbjct: 481 ARELLTELGVAFPDGGVVHTHEEAVELAGRLRAP-FVLKA---SWLEHKSEAGGVAVGID 536

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           G  ++  + + + S + +  G  ++ +Q    G+    + V    D              
Sbjct: 537 GPEQLARTFEDMHSRLGD--GDYVLEEQDTRAGTV--EILVGARRDPD------------ 580

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARID 186
                 +    GG + E +     +       D L  +       L          +   
Sbjct: 581 -LGPVIVV-GAGGTETEVLQDICLESAPVGPGDALAMLERLRCMPLLRGWRGRPAVSVDG 638

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
             D+   + +   ++ D++ +E+NP+ +  +G L V
Sbjct: 639 VVDVITRVSRLIAERPDIAEIELNPVRVAPDGALTV 674


>gi|30248926|ref|NP_840996.1| putative cyanophycin synthetase [Nitrosomonas europaea ATCC 19718]
 gi|30138543|emb|CAD84833.1| putative cyanophycin synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 768

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LLR   VPV +G +++    A  A + +  P+ V+K     G  G+G F EL    + 
Sbjct: 242 KSLLRACGVPVPEGRIVTDPADAWLAAEDIGLPV-VIKP--GDGNHGRGVFIELSNREEI 298

Query: 69  GVRVESSLKS 78
                 +L+ 
Sbjct: 299 EAAFPIALQE 308


>gi|284162213|ref|YP_003400836.1| phosphoribosylamine/glycine ligase [Archaeoglobus profundus DSM
           5631]
 gi|284012210|gb|ADB58163.1| phosphoribosylamine/glycine ligase [Archaeoglobus profundus DSM
           5631]
          Length = 472

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 24/125 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K  L+K  VP+ +    +   +A+   K +   G   VVK+   A G+            
Sbjct: 111 KDFLKKIGVPIPEYRNFNDPESAKEYAKEMFESGKKVVVKADGLAAGK------------ 158

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             GV V  SL      I EI    ++ K+ G  G   N + +E+      E+  + + D 
Sbjct: 159 --GVFVCDSLDEAFFAIDEI----MVRKRFGDAG---NRIVIEERLY-GIEVAFTAITDG 208

Query: 127 TSGMV 131
            +   
Sbjct: 209 ETVKP 213


>gi|281421177|ref|ZP_06252176.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella copri DSM
           18205]
 gi|281404712|gb|EFB35392.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella copri DSM
           18205]
          Length = 393

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 40/194 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     +    ++A   +  P  VVK  + + G G+           
Sbjct: 111 AKEL----GLRTAKYFYAKTFEEFKNAADEIGFPC-VVKPLMSSSGHGQSY--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGS-RVNCVYVEDGADILRELYLSLLVDR 126
                  +   +    +E              G   V  V +E+  D   E  L  L   
Sbjct: 157 -----VHNDDELKEAYKE----------AMEEGRGDVKEVIIEEFIDFDSEFTL--LTVT 199

Query: 127 TSGMVAF----IASTQGGMDIEEVAK--DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                      I   Q G D  E  +    P++  K        VT     +   +  ++
Sbjct: 200 QKDGPTLFCPPIGHVQKGGDYRESWQPFQIPEEALKKAEHIAGEVT--KALTGAGLWGVE 257

Query: 181 GQARIDGGDLFPNL 194
                 G  +F  L
Sbjct: 258 FFLSKQGEVIFSEL 271


>gi|145590409|ref|YP_001152411.1| carbamoyl phosphate synthase large subunit [Pyrobaculum arsenaticum
           DSM 13514]
 gi|145282177|gb|ABP49759.1| carbamoyl-phosphate synthase large subunit [Pyrobaculum arsenaticum
           DSM 13514]
          Length = 1025

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 14/91 (15%)

Query: 8   AKALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           ++ L     ++  +PV       S   A    + L  P+ V   ++     G G F    
Sbjct: 125 SRDLFQKAMKEAGIPVPPSSPAKSPEEALEIARGLGYPIVV---RVSFNLGGAGAFVARS 181

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITK 94
            ++              +  +  +G  L+ K
Sbjct: 182 EEALRARIY-------KAFAQSAIGEVLVEK 205


>gi|91787311|ref|YP_548263.1| cyanophycin synthetase [Polaromonas sp. JS666]
 gi|91696536|gb|ABE43365.1| Cyanophycin synthetase [Polaromonas sp. JS666]
          Length = 743

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV  G ++S+   A  A + +  P+ VVK      GRG         + + 
Sbjct: 228 KSLLATCGVPVPDGEIVSTAERAWEAAQDIGLPV-VVKPSDGNHGRGVSLDLNTREEVEA 286

Query: 69  GVRVES 74
             RV  
Sbjct: 287 AFRVAE 292


>gi|317401779|gb|EFV82395.1| cyanophycin synthetase [Achromobacter xylosoxidans C54]
          Length = 871

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G ++ S   A SA + +  P+ V
Sbjct: 224 KELLSTCGVPVPEGRLVDSEDDAWSAAEDIGLPVVV 259


>gi|307332145|ref|ZP_07611231.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113]
 gi|306882210|gb|EFN13310.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 711

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 74/230 (32%), Gaps = 21/230 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y +P     +  +V  A S    +  P+ +         +       +   S
Sbjct: 27  EGKRITDAYGIPTPAEGLAETVDEAVSLADRIGFPVVLKIVSPDILHKTDAGGVRVGLAS 86

Query: 67  KGGVRVESSL--KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              VR   +    +  S   E     +  +Q  P G               +E+ +  + 
Sbjct: 87  CAEVRGAFTAIVDNARSYDPEARIQGVQVQQMVPDGG--------------QEVIVGAVT 132

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D T G V       GG+ +E +     +       + L  +     A +   +       
Sbjct: 133 DPTFGKVVAFG--LGGVLVEVLKDITFRLAPATEDEALSMLDGIRAAEVLRGVRGGPAVD 190

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           R    DL   + +   D  +++ +++NP+    +G +   D ++   D A
Sbjct: 191 RGALADLIVRVSRLVADFPEITEVDLNPVFATPSG-VLAADVRLLIGDPA 239


>gi|270291257|ref|ZP_06197479.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Pediococcus acidilactici 7_4]
 gi|270280103|gb|EFA25939.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Pediococcus acidilactici 7_4]
          Length = 386

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E   K  L  +++PV     +S+      AI  L  P  +   +    G G+      
Sbjct: 113 LRE---KHFLASHDLPVTPYQPVSNPTELNDAITKLGYPCILKSCEGGYDGHGQQDINSE 169

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G   V  +    I + R+     L    T     +V C  V +       L+ S+
Sbjct: 170 ADLPAGRSLVSQTP--CILEKRQRFSKELSVMVTRSRDGQVRCFPVAENIHHNHILHQSI 227

Query: 123 LVDRTSG 129
           +  R + 
Sbjct: 228 VPARVTK 234


>gi|318041817|ref|ZP_07973773.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           CB0101]
          Length = 1097

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + +++  AE+  + +     +++     GG G G           
Sbjct: 133 KQAMERIGVAVCPSGIATTLEEAEAVGEQIGSYPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +     L ++            VN + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFRAICLSGLDAS-----------PVNQILIEQSLLGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  + S      IE +          + + P   +T  +   L D  
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQA 269


>gi|290956178|ref|YP_003487360.1| hypothetical protein SCAB_16611 [Streptomyces scabiei 87.22]
 gi|260645704|emb|CBG68795.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 710

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 23/220 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    +   V  A S      GP+ +                 L    
Sbjct: 28  EGKVIADAYGIAVPGEELARDVDEAVSFAARFGGPVVM----------KIVSPDILHKTD 77

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV V        +D+R    + +   +     +R+  V V++     +E+ +  + D 
Sbjct: 78  AGGVIVGV---EGAADVRAAFHTIVDNARAYAADARIEGVQVQELLPKGQEVIVGAVTDP 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQ 182
           T G V       GG+ +E +     +      +D    ++  D     ++L         
Sbjct: 135 TFGKVVAFG--LGGVLVEVLKDVTFRLA---PVDADEALSMLDSIRAAEILRGVRGAPAV 189

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
            R    +    + +   D  +++ +++NP+I    G +  
Sbjct: 190 DRWAVAEQIRRVSELVADFPEIAEVDLNPVIATPEGAVAA 229


>gi|325981162|ref|YP_004293564.1| cyanophycin synthetase [Nitrosomonas sp. AL212]
 gi|325530681|gb|ADZ25402.1| cyanophycin synthetase [Nitrosomonas sp. AL212]
          Length = 773

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL+   VPV  G ++ S  AA  A K +  P+ +       G  G+G F EL   S+
Sbjct: 239 KTLLQSCGVPVPAGRIVESAKAAWEAAKDIGLPVVIKPCD---GNHGRGVFIELCQQSE 294


>gi|223935114|ref|ZP_03627032.1| acetyl-CoA carboxylase, biotin carboxylase [bacterium Ellin514]
 gi|223895998|gb|EEF62441.1| acetyl-CoA carboxylase, biotin carboxylase [bacterium Ellin514]
          Length = 460

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 62/187 (33%), Gaps = 28/187 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +++L +K  VP+  G   ++ +   A    K +  P+ ++K+    GGRG          
Sbjct: 119 SRSLAKKAGVPIPPGSEGIVENEQEALVVAKRIGYPV-MIKAVAGGGGRGM-------RV 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +   + +     +  ++  +  G+              + VY+E   +    +   +L D
Sbjct: 171 AHNDISLVKGYHTARTEAEKAFGN--------------SGVYIEKFIENPHHIEFQILGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++    LI+     +  +   +   + EL     
Sbjct: 217 NKGH---IIHLGERDCSIQRRNQKVVEETPSPLIEGKFRKLRDKMGKAAVKIAELAHYTN 273

Query: 185 IDGGDLF 191
               +  
Sbjct: 274 AGTVEFI 280


>gi|169831780|ref|YP_001717762.1| phosphoribosylamine--glycine ligase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638624|gb|ACA60130.1| phosphoribosylamine--glycine ligase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 425

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P A     +   AA   ++ L GP  VVK+   A G+             
Sbjct: 106 AKDLMAAYGIPTAAHRTFADPAAAREYVRHLDGPC-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V   ++  ++ + E+    ++ +  G  G   N V VE+      E+ +    D  
Sbjct: 152 -GVIVCDGVEEALAAVDEV----MVARAFGAAG---NRVVVEERLS-GEEVSILAFTDGR 202

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 203 TIRPMLPA 210


>gi|33602559|ref|NP_890119.1| cyanophycin synthetase [Bordetella bronchiseptica RB50]
 gi|33576998|emb|CAE34078.1| cyanophycin synthetase [Bordetella bronchiseptica RB50]
          Length = 879

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G ++ S   A  A + +  P+ VVK   + G  G+G F  L    + 
Sbjct: 232 KELLSTCGVPVPEGRLVQSAVDAWEAAQDIGLPV-VVKP--YDGNHGRGVFTNLLTRDEI 288

Query: 69  GVRVESSLKS 78
                 ++  
Sbjct: 289 ESAYAVAVDE 298


>gi|256379248|ref|YP_003102908.1| carbamoyl-phosphate synthase, large subunit [Actinosynnema mirum
           DSM 43827]
 gi|255923551|gb|ACU39062.1| carbamoyl-phosphate synthase, large subunit [Actinosynnema mirum
           DSM 43827]
          Length = 1099

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++R+    V +  V  ++    + +  L  P+ +         R       L +    
Sbjct: 133 KDIVREIGAEVPRSAVCRTMDEVRATVADLGLPVVI---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +                TG   S V  V +E+     +E  L L+ DR  
Sbjct: 181 ---MAHTPEQLERLAA-----------TGLAESPVTEVLIEESVLGWKEYELELMRDRND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE +          + + P + +T  +   + D
Sbjct: 227 NVVVI-------CSIENIDPMGVHTGDSVTVAPAMTLTDREYQHMRD 266


>gi|157829492|gb|ABV82695.1| succinate-CoA ligase GDP-forming beta subunit-like protein
          [Ornithorhynchus anatinus]
          Length = 36

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVISS 27
          +N+ E+Q+K L+  + V V +  V  +
Sbjct: 10 LNLQEFQSKKLMADHGVKVQRFFVADT 36


>gi|27381179|ref|NP_772708.1| hypothetical protein bll6068 [Bradyrhizobium japonicum USDA 110]
 gi|27354346|dbj|BAC51333.1| bll6068 [Bradyrhizobium japonicum USDA 110]
          Length = 897

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 81/228 (35%), Gaps = 25/228 (10%)

Query: 9   KALLRKYNVP-VAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K LL  Y++  V        V  A +    +   G   V+K           R     +D
Sbjct: 498 KHLLEAYDIAMVPTYAAAD-VEQAVAYANEMFAQGATVVLKI--------MSRDIVHKSD 548

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G V   ++ ++V +   +IL      +     G  +    V       REL L L  D
Sbjct: 549 VGGVVLNLTTPEAVRAAASDILARARKLRPEARIGGVIVQAMVVKAK--ARELILGLADD 606

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQG 181
            T G V      +GG  +E +     + +    +D  +     D   +  +L    ++  
Sbjct: 607 PTFGTVVVFG--RGGTAVEIIND---RALALPPLDVQLARDLIDRTRVSRLLRAYRDVPA 661

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             +     +   L +   D  ++   +INPL+  + G +  +D++++ 
Sbjct: 662 VKQDAVAMVLVKLAQMAADIPEIREFDINPLLADETG-VTAVDARVAV 708



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 119/392 (30%), Gaps = 75/392 (19%)

Query: 51  AGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
           AG RG      + A    G     SL+  +       G  LI               +  
Sbjct: 89  AGRRGSAGALIVTAGLGHG---PGSLQEAVIAAARKYGMRLIGPNCLG--------IMMP 137

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI---------FKLLIDP 161
           G  +      S            + S  G +    V     + +          ++ +D 
Sbjct: 138 GVSLNA----SFAAHMPGAGNLALISQSGAIAAGMVDWAAQRGVGFSGIVSIGDQIDVDI 193

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
              +    +      + L  +A  D          A          + P++++K+GR   
Sbjct: 194 ADLLDYFAMDHKTRAILLYIEAIKDARKFMSAARAAAR--------VKPVVVVKSGR-MA 244

Query: 222 LDSKI---------SFD--DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIG 270
             +K            D   +A +R   I  + D+ E       A+            + 
Sbjct: 245 QGAKAAATHTGALAGADAVYDAAFRRAGILRVSDLRELFDC---AETLGRVESPTGKRLA 301

Query: 271 CMVNGAGLAMATMDIIKLYGGAP---------------------ANFLDVGGGADQDKVA 309
            + NG G+ +  +D +   GG P                     AN +D+ G AD  + A
Sbjct: 302 ILTNGGGIGVLAVDRLVELGGIPASISADARKKLDDALPPTWSGANPVDIVGDADAARYA 361

Query: 310 AAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGI---LSAVKEVKINIPLVMRLEGANVD 365
           AA +++ +D     +L+ N+   I     + + +   +   +E   +    +       D
Sbjct: 362 AALEVLLADPDNDAVLVLNVQTAIASASDIARTVTELVGKYREKHRSWAKPVLAAWVGAD 421

Query: 366 IG-NRLIAESGLNVITAIDLDDAAQKIVHAVK 396
               + ++  G+      D  DA +  +H V+
Sbjct: 422 QAIIQTLSGGGIPNYPTED--DAVRGFMHLVR 451


>gi|325969057|ref|YP_004245249.1| carbamoyl-phosphate synthase, large subunit [Vulcanisaeta
           moutnovskia 768-28]
 gi|323708260|gb|ADY01747.1| carbamoyl-phosphate synthase, large subunit [Vulcanisaeta
           moutnovskia 768-28]
          Length = 1038

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ ++ + V   +   S + A  A   L  P+    +++     G G F    ++   
Sbjct: 129 KELMSRHGISVLPSITTYSPNEALDAANKLGYPVL---ARVSFNLGGAGAFVAYNSNELA 185

Query: 69  GVRVESSLKSVISDIREIL 87
                       S+I+E+L
Sbjct: 186 SK---YHKALAQSEIKEVL 201


>gi|242798922|ref|XP_002483268.1| carbamoyl-phosphate synthase, large subunit [Talaromyces stipitatus
           ATCC 10500]
 gi|218716613|gb|EED16034.1| carbamoyl-phosphate synthase, large subunit [Talaromyces stipitatus
           ATCC 10500]
          Length = 1180

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ +  ++V  A  A   +  P+ V  +    G               
Sbjct: 230 AKAL-NEINIPIAESIACNTVDEALEAADKIGYPIIVRSAYALGGL-------------- 274

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    S+ + + +     L             S    + VE      +E+   ++ D  
Sbjct: 275 -GSGFASNREELKNLSSRSL-------------SLAPQILVEKSLKGWKEVEYEVVRDAK 320

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 321 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 373

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 374 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 422


>gi|25091055|sp|Q8K8Y4|PUR2_STRP3 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
          Length = 421

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|116753567|ref|YP_842685.1| phosphoribosylamine--glycine ligase [Methanosaeta thermophila PT]
 gi|116665018|gb|ABK14045.1| phosphoribosylamine--glycine ligase [Methanosaeta thermophila PT]
          Length = 468

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 24/118 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGKGRFKELPA 64
           K LL +  VPV           A+  +       PG   V+K+   A G+G         
Sbjct: 113 KDLLSEIGVPVPPYRNFDDPDEAKEFVDQFYDTHPGENLVIKADGLAAGKGSV------- 165

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                  V SS    +S +  I+    I    G      N + +E   +    ++ ++
Sbjct: 166 -------VCSSRDEALSTVERIMVEPRIFGDAG------NRIEIERRLEGRELMFFAI 210


>gi|255730939|ref|XP_002550394.1| multifunctional urea amidolyase [Candida tropicalis MYA-3404]
 gi|240132351|gb|EER31909.1| multifunctional urea amidolyase [Candida tropicalis MYA-3404]
          Length = 1815

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 61/206 (29%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    ++     A      L  P+ V               K    
Sbjct: 732 HSAREIAEKAGVPLVPGSGLVKDAKEAREIAAKLEYPVMV---------------KSTAG 776

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G++   S + +     E +  T+  +     G   + V++E   +  R + + +L 
Sbjct: 777 GGGIGLQKVDSEEDI-----ERVFQTVQHQGKSYFGD--SGVFLERFVENARHVEVQMLG 829

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 830 DGKGHAIAV------GERDCSLQRRNQKIIEETPAPNLPEATRTKMREAAESLGASMNY- 882

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y A    +   LE+N 
Sbjct: 883 -KCAGTVEYIYDA-KRDEFYFLEVNA 906


>gi|163855516|ref|YP_001629814.1| Acetyl-CoA synthetase [Bordetella petrii DSM 12804]
 gi|163259244|emb|CAP41544.1| Acetyl-CoA synthetase [Bordetella petrii]
          Length = 704

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 23/230 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+QAK LL    +P     ++SSV  A  A K +  P  V+K              +  +
Sbjct: 489 EFQAKKLLALAGIPGLPEELVSSVDQALGAAKRIGYP-LVMKIV--------SPEIKHKS 539

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +  G +      + V      +L               V  V +        E  L +  
Sbjct: 540 EIGGVLLDIKDTEQVRQGYETLLRRAADAAPNAE----VRGVLMARQVKGGVETILGVFR 595

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D   G +       GG+ +E +     ++      +    +      +L     ++G   
Sbjct: 596 DPVIGPIVMFG--LGGVLVEILKDVTFRRAPISRDEAYRMIREVKGHALLQ--GVRGVPA 651

Query: 185 IDGGDLFPNLYKA--FCDKDMSLLE---INPLIIMKNGR-LRVLDSKISF 228
            D   L   L K   F    +  +E   +NP +++  G     LD+ I  
Sbjct: 652 ADEDALIVALVKLSIFAASQIDSIESIDVNPFVVLPAGNGAFALDALIEV 701


>gi|21909562|ref|NP_663830.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS315]
 gi|21903742|gb|AAM78633.1| phosphoribosylamine-glycine ligase [Streptococcus pyogenes MGAS315]
          Length = 424

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 110 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 156 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 193


>gi|85539369|emb|CAJ57300.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G       + K   GI+ A ++    +      + +R  G N 
Sbjct: 61  GRDKILIIGGATANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPNY 112


>gi|56808883|ref|ZP_00366593.1| COG0151: Phosphoribosylamine-glycine ligase [Streptococcus pyogenes
           M49 591]
          Length = 451

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 137 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 182

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 183 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 220


>gi|317131202|ref|YP_004090516.1| phosphoribosylamine/glycine ligase [Ethanoligenens harbinense
           YUAN-3]
 gi|315469181|gb|ADU25785.1| phosphoribosylamine/glycine ligase [Ethanoligenens harbinense
           YUAN-3]
          Length = 419

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V  S   A + I        V+K+   A G+             
Sbjct: 106 SKNLMKKYGIPTAAYDVFESPIEALAHIVKEGRYPAVIKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  +     + +  I+   +     G +G   N V VE+  
Sbjct: 153 -GVVIAQNEDEARAALHAIMEDKIF----GASG---NRVVVEEFL 189


>gi|15674274|ref|NP_268447.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes M1 GAS]
 gi|20139672|sp|Q9A1Y7|PUR2_STRP1 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|13621353|gb|AAK33169.1| phosphoribosylamine-glycine ligase [Streptococcus pyogenes M1 GAS]
          Length = 421

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|323474129|gb|ADX84735.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus REY15A]
 gi|323476800|gb|ADX82038.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus HVE10/4]
          Length = 660

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 78/224 (34%), Gaps = 28/224 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++    +  P+ +                 +   
Sbjct: 465 FEALKLMEIYGIRTPKWGLATNENEAQNVADNIGFPVVM----------KISPDTPVHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 EMKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEIFVGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  + S  GG+ +E V K+    +  +  D    +  E           +G    
Sbjct: 561 PAFGHVVLVGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVESKIHDMLYARKRGYDEN 617

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   + +   D ++  ++INPL + +NG    +D +I+ +
Sbjct: 618 SLIRTITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIALE 660



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           P N LD+ G AD+++   A KI+++    K I++     ++ C  + + + +   +  I 
Sbjct: 340 PKNPLDLTGDADKERYYNALKIVSNLDCTKLIIVQSL-PMVSCSDVARTVSNFKGKGVIG 398

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +     G + D+  +++  +G+   T    +DA + I
Sbjct: 399 VTM-----GLDEDMALKILETTGIPGYTFP--EDAVKAI 430


>gi|126730566|ref|ZP_01746376.1| CoA-binding protein [Sagittula stellata E-37]
 gi|126708732|gb|EBA07788.1| CoA-binding protein [Sagittula stellata E-37]
          Length = 689

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 24/231 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY+ K  LR+  + V  G + ++V  AE+A   +  P+ V+K+Q  A             
Sbjct: 477 EYRGKDFLRELGIGVPNGRLATTVAEAEAAASDVGYPV-VLKAQAAAL---------AHK 526

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV     +    +             +  P    ++ + +E       E+ +    
Sbjct: 527 SDAGGV--AVDIADATALRAAWEKMYASVGKARPD-ITLDGILIEAMDADGTEMIVGASR 583

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDMLELQ 180
           D  +     +    GG+  E +A     ++    ID    +           L       
Sbjct: 584 D-PNWGPVILVGL-GGVWTEILADT---RLLPADIDQAGAIREIGMLRSARMLGAFRGKP 638

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFD 229
            +      ++   L      + D++ ++INPLI+   G+ +  LD+    +
Sbjct: 639 ARDVAALAEVIVRLGALMRAQPDIAEIDINPLIVRVEGKGVTALDALFVLN 689


>gi|85858298|ref|YP_460500.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Syntrophus aciditrophicus SB]
 gi|85721389|gb|ABC76332.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Syntrophus aciditrophicus SB]
          Length = 899

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 43/237 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KA L  Y +P     +  ++  A S  K +  P+ +  +      + +          
Sbjct: 496 ESKAFLAGYGIPSVDSHLAGTLEEALSLAKEIGYPVVIKIASPQILYKREAG-------- 547

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G +    S + + +      G  +   +     + +  + ++   +   +  L +   R
Sbjct: 548 -GVISGIFSEEQLRAA----WGRMMSAVKQRAPDAVIEGITLQKMIE-NVDYQLIVGSQR 601

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--------- 177
                +FI    GG             I    I    G+   +  +L   L         
Sbjct: 602 DKDFGSFILFGMGG--------RNADLIRDFSI----GLPPLN-RTLAKRLMEETKAYSL 648

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                           ++  N      D  +++ +EINPL+I  +GR   L+++I  
Sbjct: 649 IQGYRGKTPADLNALEEVLVNFSNLIVDFPEIAEIEINPLVI-SDGRPCALNARIVL 704


>gi|170078619|ref|YP_001735257.1| acetyl-CoA synthetase [Synechococcus sp. PCC 7002]
 gi|169886288|gb|ACB00002.1| acetyl-CoA synthetase [Synechococcus sp. PCC 7002]
          Length = 915

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 28/235 (11%)

Query: 3   IHEYQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E ++K +L  Y +P V  G   S+   A +    +  P+ V+K               
Sbjct: 509 LTESESKKVLAAYGIPIVPTGN-ASTPEMAIALADEIGYPV-VLK---------LLSTTI 557

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELY 119
                 GGV +  +  + +    E +  ++  K        V    V+   ++    EL 
Sbjct: 558 THKTDVGGVELNLNSAASVERAFERICQSVTEKVGAEHFHGVT---VQPMLNLKDGYELI 614

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-- 177
           L   +D   G V    S  GG  +E       + I    ++  +   + +   +   L  
Sbjct: 615 LGSSIDGQFGPVLVFGS--GGQLVEVFQD---RAIALPPLNSTLARRTMEQTKIYKALKG 669

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
               +     +   +     +   ++  +  ++INPL    + RL  LD+++   
Sbjct: 670 VRGRKAVNLDELEQILIRFSRLIVEQPWIKEMDINPLFASGD-RLVALDARLVLH 723


>gi|148259164|ref|YP_001233291.1| GCN5-related N-acetyltransferase [Acidiphilium cryptum JF-5]
 gi|146400845|gb|ABQ29372.1| GCN5-related N-acetyltransferase [Acidiphilium cryptum JF-5]
          Length = 852

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 24/233 (10%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+LR Y +  A   ++ +     +A  +L  P+ V  S      R       L       
Sbjct: 463 AILRAYGIETAATRIVDTPEHVAAAASSLGFPVVVKVSHPDLARRRPEGSVSLDLPDAAS 522

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
               ++          ++ + L  +   P G+      V+      REL + L+ ++   
Sbjct: 523 ASAAAT----------LITARLRRRGEFPEGA---RFLVQRQLPRARELRI-LVGEQPFV 568

Query: 130 MVAFIASTQGG--MDIEEVAKDYPQKIFKLLIDPLIGVTSEDV--ASLCDMLELQGQARI 185
                    GG   D   +A D P    KL      G+       A L     L    R 
Sbjct: 569 GPTIGFGPGGGDAADTSRLAFDLPPLNLKL----AEGLILRAGGNALLRPARGLDEADRA 624

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                   + +   D  ++  LEI+PL     G +   + +I+       R  
Sbjct: 625 AVAGTLVRISQLVVDWPEIERLEIDPLFATGAG-VIAANVRITLHAPGERRQP 676


>gi|319945948|ref|ZP_08020198.1| phosphoribosylamine-glycine ligase [Streptococcus australis ATCC
           700641]
 gi|319748013|gb|EFW00257.1| phosphoribosylamine-glycine ligase [Streptococcus australis ATCC
           700641]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 98/285 (34%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFKEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLDGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLSQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  ++ K+  +++      +G +V   G  +A    +KL
Sbjct: 304 DFAQNITDILDGKEPAITWTDKGVTLGVVVASNGYPLAYEKGVKL 348


>gi|242281138|ref|YP_002993267.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242124032|gb|ACS81728.1| CoA-binding domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 902

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 75/237 (31%), Gaps = 38/237 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E +A+ +L  Y +PV +  V  S   A  A   +  P+  +K         +      
Sbjct: 494 LNEPEARRVLAAYGLPVVETKVALSAREAVIAADEIGCPV-ALKI--------RSPQINQ 544

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLS 121
           P D  G V    S + V      +L      +      G  V  +          EL++S
Sbjct: 545 PYDVGGVVLDLESTEKVWEAAATMLTRVNRQRPDAYIEGFTVQKM---GRRLGSHELFIS 601

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKD-----------YPQKIFKLLIDPLIGVTSEDV 170
              D T G    I    GGM  E V                + I +  I  L+  T    
Sbjct: 602 ASADSTFG--PIIHFGHGGMTREVVRDQAVAMVPLNMTLARELISRTRISRLLSGTPTQ- 658

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
                          D       + + F D   +  L+INPL     G +  L +KI
Sbjct: 659 ---------PPADIDDLCLTLIQVSQLFIDIPQIVHLDINPLYGDDTG-VLALGAKI 705


>gi|209558613|ref|YP_002285085.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes NZ131]
 gi|209539814|gb|ACI60390.1| Phosphoribosylamine--glycine ligase [Streptococcus pyogenes NZ131]
          Length = 451

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 137 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 182

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 183 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 220


>gi|41353047|gb|AAS01145.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A +        +++ + +R  G N
Sbjct: 61  REKILIIGGAIANFTDVAKTFTGIIQAFENYADKMKAVDLKIYVRRGGPN 110


>gi|145594009|ref|YP_001158306.1| GCN5-related N-acetyltransferase [Salinispora tropica CNB-440]
 gi|145303346|gb|ABP53928.1| GCN5-related N-acetyltransferase [Salinispora tropica CNB-440]
          Length = 868

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 6/102 (5%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y + V + V+++S   A  A + L  P+ +  +      R       L    K  V
Sbjct: 659 LLAAYGINVVESVLVASEREAVEAARKLGYPVAMKAAAPGLRHRLDLGAVRLHLPDKARV 718

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           R   +  +         G+ ++ +   P G       VED A
Sbjct: 719 RRSYTRMAAE------FGAEVLVQPMVPPGVACVVELVEDPA 754


>gi|126179586|ref|YP_001047551.1| pyruvate carboxylase subunit A [Methanoculleus marisnigri JR1]
 gi|125862380|gb|ABN57569.1| pyruvate carboxylase subunit A [Methanoculleus marisnigri JR1]
          Length = 491

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG---RFKEL 62
           +K ++R+  VPV  G    ++SV  A+     +  P+ +VK+    GG G        EL
Sbjct: 121 SKKMMREAGVPVLPGTPEGVTSVEEAKKVAAEIGYPV-IVKASAGGGGIGMHIAENEGEL 179

Query: 63  PADSKGGVRVESSL 76
                 G+R+  S 
Sbjct: 180 EEALDAGMRIAQSA 193


>gi|227827072|ref|YP_002828851.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus M.14.25]
 gi|238619237|ref|YP_002914062.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus M.16.4]
 gi|227458867|gb|ACP37553.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus M.14.25]
 gi|238380306|gb|ACR41394.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus M.16.4]
          Length = 660

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 28/224 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++    +  P+ +                 +   
Sbjct: 465 FEALKLMEIYGIRTPKWGLATNENEAQNVADNIGFPVVM----------KISPDTPVHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 EMKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEIFVGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  + S  GG+ +E V K+    +  +  D    +  E           +G    
Sbjct: 561 PAFGHVVLVGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVESKIHDMLYARKRGYDEN 617

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   + +   D ++  ++INPL + +NG    +D +I  +
Sbjct: 618 SLIRTITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIVLE 660



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           P N LD+ G AD+++   A KI+++    K I++     ++ C  + + + +   +  I 
Sbjct: 340 PKNPLDLTGDADKERYYNALKIVSNLDCTKLIIVQSL-PMVSCSDVARTVSNFKGKGVIG 398

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +     G + D+  +++  +G+   T    +DA + I
Sbjct: 399 VTM-----GLDEDMALKILETTGIPGYTFP--EDAVKAI 430


>gi|326402317|ref|YP_004282398.1| putative acetyltransferase [Acidiphilium multivorum AIU301]
 gi|325049178|dbj|BAJ79516.1| putative acetyltransferase [Acidiphilium multivorum AIU301]
          Length = 852

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 24/233 (10%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+LR Y +  A   ++ +     +A  +L  P+ V  S      R       L       
Sbjct: 463 AILRAYGIETAATRIVDTPEHVAAAASSLGFPVVVKVSHPDLARRRPEGSVSLDLPDAAS 522

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
               ++          ++ + L  +   P G+      V+      REL + L+ ++   
Sbjct: 523 ASAAAT----------LITARLRRRGEFPEGA---RFLVQRQLPRARELRI-LVGEQPFV 568

Query: 130 MVAFIASTQGG--MDIEEVAKDYPQKIFKLLIDPLIGVTSEDV--ASLCDMLELQGQARI 185
                    GG   D   +A D P    KL      G+       A L     L    R 
Sbjct: 569 GPTIGFGPGGGDAADTSRLAFDLPPLNLKL----AEGLILRAGGNALLRPARGLDEADRA 624

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
                   + +   D  ++  LEI+PL     G +   + +I+       R  
Sbjct: 625 AVAGTLVRISQLVVDWPEIERLEIDPLFATGAG-VIAANVRITLHAPGERRQP 676


>gi|148985393|ref|ZP_01818598.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP3-BS71]
 gi|147922351|gb|EDK73471.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799234|emb|CBW31752.1| phosphoribosylamine-glycine ligase [Streptococcus pneumoniae
           OXC141]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|147678875|ref|YP_001213090.1| phosphoribosylamine-glycine ligase [Pelotomaculum thermopropionicum
           SI]
 gi|146274972|dbj|BAF60721.1| phosphoribosylamine-glycine ligase [Pelotomaculum thermopropionicum
           SI]
          Length = 424

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A   V      A + IK    P  VVK+   A G+             
Sbjct: 106 AKEIMAKYGIPTADYAVFDRPDRAAAYIKQKGAPC-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V    ++ +  +  I    ++ +  G  G   + V VE+         +S+L    
Sbjct: 152 -GVIVAMDEQAALDAVCSI----MVDRIFGSAG---DRVVVEECLTGEE---VSILAFTD 200

Query: 128 SGMVAFIASTQG 139
              V  + S+Q 
Sbjct: 201 GYNVVPMVSSQD 212


>gi|41353043|gb|AAS01143.1| AclB [uncultured prokaryote]
          Length = 110

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             M  G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMGAGGGASVVYADTIADXXGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A +       +I + + +R  G N
Sbjct: 61  REKILIIGGAIANFTXVAKTFTGIIQAFENYADKMKEIGVKIYVRRGGPN 110


>gi|85539433|emb|CAJ57332.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 116

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 270 GCMVNGAGLAMATMDIIK-LYGGAP--ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I  + GG    AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP-----LVMRLEGANV 364
            +  ++ I G I     + K   GI+ A ++    +      + +R  G + 
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEKYADKMKDVGTRIYVRRGGPDY 112


>gi|322705620|gb|EFY97204.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Metarhizium anisopliae ARSEF 23]
          Length = 1290

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+AK + + +V  A  A + +  P+ V  +    G               
Sbjct: 339 AKAL-EEINIPIAKSIAVGTVDEALDAAEKVGYPIIVRAAYALGGL-------------- 383

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +EL   ++ D  
Sbjct: 384 -GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKELEYEVVRDAN 429

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 430 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 482

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 483 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 531


>gi|226940889|ref|YP_002795963.1| cyanophycin synthetase [Laribacter hongkongensis HLHK9]
 gi|226715816|gb|ACO74954.1| ATP-grasp enzyme-like D-alanine-D-alanine ligase [Laribacter
           hongkongensis HLHK9]
          Length = 856

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV +G ++S   AA +A + +  P+ V+K +   G +GKG    L +  +
Sbjct: 210 KELLAAAGVPVPEGRIVSDGDAAWTAAEAIGLPV-VIKPR--DGNQGKGVAVNLTSRDE 265


>gi|159129416|gb|EDP54530.1| carbamoyl-phosphate synthase, large subunit [Aspergillus fumigatus
           A1163]
          Length = 1175

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 71/226 (31%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ + +++V  A  A +++  P+ V  +    G                G  
Sbjct: 228 LKEINIPIAESIAVNTVDEALKAAESVGYPIIVRSAYALGGL---------------GSG 272

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + + + +     L             +    + VE      +E+   ++ D  +  +
Sbjct: 273 FAENPEELKNLASRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAANNCI 319

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 320 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 372

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 373 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 417


>gi|254245291|ref|ZP_04938613.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 2192]
 gi|126198669|gb|EAZ62732.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 2192]
          Length = 715

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 19/232 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 544 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 600

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G VA      GG+ +E +     ++    + +    + S   A L           
Sbjct: 601 DPLFGPVALFG--LGGIFVEVLQDVVFRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRAD 658

Query: 184 RIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 659 VAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 710


>gi|120612619|ref|YP_972297.1| cyanophycin synthetase [Acidovorax citrulli AAC00-1]
 gi|120591083|gb|ABM34523.1| cyanophycin synthetase [Acidovorax citrulli AAC00-1]
          Length = 723

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G V++    A    + +  P+ V
Sbjct: 225 KRLLAACGVPVPEGRVVADAQEAWEVAQDIGFPVTV 260


>gi|68053080|sp|Q5XEF0|PUR2_STRP6 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
          Length = 421

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|71001318|ref|XP_755340.1| carbamoyl-phosphate synthase, large subunit [Aspergillus fumigatus
           Af293]
 gi|66852978|gb|EAL93302.1| carbamoyl-phosphate synthase, large subunit [Aspergillus fumigatus
           Af293]
          Length = 1175

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 71/226 (31%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ + +++V  A  A +++  P+ V  +    G                G  
Sbjct: 228 LKEINIPIAESIAVNTVDEALKAAESVGYPIIVRSAYALGGL---------------GSG 272

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + + + +     L             +    + VE      +E+   ++ D  +  +
Sbjct: 273 FAENPEELKNLASRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAANNCI 319

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 320 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 372

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 373 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 417


>gi|218893023|ref|YP_002441892.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
 gi|218773251|emb|CAW29063.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 715

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 19/232 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 544 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 600

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G VA      GG+ +E +     ++    + +    + S   A L           
Sbjct: 601 DPLFGPVALFG--LGGIFVEVLQDVVFRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRAD 658

Query: 184 RIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 659 VAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 710


>gi|229582503|ref|YP_002840902.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus Y.N.15.51]
 gi|229584239|ref|YP_002842740.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus M.16.27]
 gi|284997114|ref|YP_003418881.1| CoA-binding domain protein [Sulfolobus islandicus L.D.8.5]
 gi|228013219|gb|ACP48980.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus Y.N.15.51]
 gi|228019288|gb|ACP54695.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus M.16.27]
 gi|284445009|gb|ADB86511.1| CoA-binding domain protein [Sulfolobus islandicus L.D.8.5]
          Length = 660

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 28/224 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++    +  P+ +                 +   
Sbjct: 465 FEALKLMEIYGIRTPKWGLATNENEAQNVADNIGFPVVM----------KISPDTPVHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 EMKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEIFVGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  + S  GG+ +E V K+    +  +  D    +  E           +G    
Sbjct: 561 PAFGHVVLVGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVESKIHDMLYARKRGYDEN 617

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   + +   D ++  ++INPL + +NG    +D +I  +
Sbjct: 618 SLIRTITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIVLE 660



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           P N LD+ G AD+++   A KI+++    K I++     ++ C  + + + +   +  I 
Sbjct: 340 PKNPLDLTGDADKERYYNALKIVSNLDCTKLIIVQSL-PMVSCSDVARTVSNFKGKGVIG 398

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +     G + D+  +++  +G+   T    +DA + I
Sbjct: 399 VTM-----GLDEDMALKILETTGIPGYTFP--EDAVKAI 430


>gi|154324146|ref|XP_001561387.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150842701|gb|EDN17894.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 464

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 72/233 (30%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K     N+P+A+ V +S+V  A  A K +  P+ V  +    G            
Sbjct: 211 RDLFAKALGEINIPIAQSVAVSTVDEALEAAKGIGYPIIVRAAYALGGL----------- 259

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E+   ++ 
Sbjct: 260 ----GSGFANNEEELRNMASRSLTLS-------------PQILVEKSLKGWKEVEYEVVR 302

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D ++  +          ++E            +++ P   ++ E+          +   L
Sbjct: 303 DASNNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHL 355

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 356 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 407


>gi|19745226|ref|NP_606362.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS8232]
 gi|25091068|sp|Q8P308|PUR2_STRP8 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|19747319|gb|AAL96861.1| phosphoribosylamine-glycine ligase [Streptococcus pyogenes
           MGAS8232]
          Length = 421

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|229578739|ref|YP_002837137.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus Y.G.57.14]
 gi|228009453|gb|ACP45215.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus Y.G.57.14]
          Length = 660

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 28/224 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++    +  P+ +                 +   
Sbjct: 465 FEALKLMEIYGIRTPKWGLATNENEAQNVADNIGFPVVM----------KISPDTPVHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 EMKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEIFVGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  + S  GG+ +E V K+    +  +  D    +  E           +G    
Sbjct: 561 PAFGHVVLVGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVESKIHDMLYARKRGYDEN 617

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   + +   D ++  ++INPL + +NG    +D +I  +
Sbjct: 618 SLIRTITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIVLE 660



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           P N LD+ G AD+++   A KI+++    K I++     ++ C  + + + +   +  I 
Sbjct: 340 PKNPLDLTGDADKERYYNALKIVSNLDCTKLIIVQSL-PMVSCSDVARTVSNFKGKGVIG 398

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +     G + D+  +++  +G+   T    +DA + I
Sbjct: 399 VTM-----GLDEDMALKILETTGIPGYTFP--EDAVKAI 430


>gi|167464341|ref|ZP_02329430.1| phosphoribosylamine--glycine ligase [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322381568|ref|ZP_08055542.1| phosphoribosylamine--glycine ligase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321154462|gb|EFX46764.1| phosphoribosylamine--glycine ligase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 426

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ KY +P A          A S ++T P P+ VVK+   A G+              
Sbjct: 107 KDLMHKYGIPTAAYRTFEDAEEALSYVRTQPLPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +     IR ++         G  G   + V +E+  +   E+ L   VD ++
Sbjct: 152 GVIVARTREEAEQAIRHMM-------IDGAFGQSGSQVVIEEFLE-GEEMSLLAFVDGST 203

Query: 129 GMVAF 133
                
Sbjct: 204 VRPMV 208


>gi|71902695|ref|YP_279498.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS6180]
 gi|71801790|gb|AAX71143.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS6180]
          Length = 470

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 156 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGVPI-VVKADGLALGK------------- 201

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 202 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 239


>gi|15596214|ref|NP_249708.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa PAO1]
 gi|9946928|gb|AAG04406.1|AE004534_4 pimeloyl-CoA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 715

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 19/232 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 544 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 600

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G VA      GG+ +E +     ++    + +    + S   A L           
Sbjct: 601 DPLFGPVALFG--LGGIFVEVLQDVVFRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRAD 658

Query: 184 RIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 659 VAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 710


>gi|227829801|ref|YP_002831580.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus L.S.2.15]
 gi|227456248|gb|ACP34935.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus islandicus L.S.2.15]
          Length = 660

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 28/224 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++    +  P+ +                 +   
Sbjct: 465 FEALKLMEIYGIRTPKWGLATNENEAQNVADNIGFPVVM----------KISPDTPVHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 EMKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEIFVGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  + S  GG+ +E V K+    +  +  D    +  E           +G    
Sbjct: 561 PAFGHVVLVGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVESKIHDMLYARKRGYDEN 617

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   + +   D ++  ++INPL + +NG    +D +I  +
Sbjct: 618 SLIRTITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIVLE 660



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           P N LD+ G AD+++   A KI+++    K I++     ++ C  + + + +   +  I 
Sbjct: 340 PKNPLDLTGDADKERYYNALKIVSNLDCTKLIIVQSL-PMVSCSDVARTVSNFKGKGVIG 398

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + +     G + D+  +++  +G+   T    +DA + I
Sbjct: 399 VTM-----GLDEDMALKILETTGIPGYTFP--EDAVKAI 430


>gi|195471593|ref|XP_002088087.1| GE18382 [Drosophila yakuba]
 gi|194174188|gb|EDW87799.1| GE18382 [Drosophila yakuba]
          Length = 1353

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFLLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V ++ +     + EILG  
Sbjct: 160 -GVVVAANAEEACQAVDEILGQL 181


>gi|13475504|ref|NP_107068.1| hypothetical protein mlr6591 [Mesorhizobium loti MAFF303099]
 gi|14026256|dbj|BAB52854.1| mlr6591 [Mesorhizobium loti MAFF303099]
          Length = 893

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 79/235 (33%), Gaps = 25/235 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           + E +AKA +  Y +PV + ++  S   A  A   L       VVK             K
Sbjct: 489 LTEPEAKAAICAYGIPVPETIIARSPAEAGRAASRLLKTSEQVVVK-----LLSKAISHK 543

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   G+   ++ +     ++  L       Q    G  V  + V       +EL L
Sbjct: 544 SDIGGVVLGIAAAAAAEEAARSVKARLRKH--DPQADIEGYAVQPMVVRKQ---AQELIL 598

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-----PLIGVTSEDVASLCD 175
            +  D   G V    +  GG+ +E         I    +D      LIG  +     L  
Sbjct: 599 GVSRDPIFGPVLLFGA--GGVAVEVTDDT---AIALPPLDDVLAGDLIG-QTRIGRLLAG 652

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
             + +   R         L +   D   +  ++INPL+    G +  LD++I  +
Sbjct: 653 FRDRKPADRQAIVAALNGLSQMVVDFPCLVSMDINPLLADTAG-VIALDARIEIE 706


>gi|22298800|ref|NP_682047.1| hypothetical protein tlr1257 [Thermosynechococcus elongatus BP-1]
 gi|22294981|dbj|BAC08809.1| tlr1257 [Thermosynechococcus elongatus BP-1]
          Length = 905

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 92/274 (33%), Gaps = 31/274 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E++AK +L  Y +PV +  +  S   A +A   L  P+ V+K                
Sbjct: 504 LTEWEAKTVLAAYGLPVVETCIARSEAEAVAAADRLGYPV-VLK---------LYSPTIT 553

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV +     + +    + +   + T      G     V V+      +   L +
Sbjct: 554 HKTDVGGVALNLPDAAAVITAYQQIEQNVTTAV--GAGHFA-GVTVQPMIP-WKGFELIV 609

Query: 123 LVDRTSG-MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLEL 179
                +      +  T G   + EV +D    +  L       +   ++   +   +   
Sbjct: 610 GSSTDAQFGPVILFGTGG--QLVEVLEDTAIALPPLNTTLARRLIQQTKISRAFAGVRGW 667

Query: 180 QGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD-DNALYRHL 237
                    DL         ++  +  ++INPL++    RL VLD++I    D +++   
Sbjct: 668 PALNLALLEDLLVRFSLLVVEQPWIKEIDINPLLVAPPDRLLVLDARIVLHQDESMFVKP 727

Query: 238 DI----------QELRDVSEEDSREIEAKQHNLS 261
            I           +LRD +    R I  +   L 
Sbjct: 728 AIRPYPSQYVRPWQLRDGTPVLIRPIRPEDEPLM 761


>gi|152991080|ref|YP_001356802.1| phosphoribosylamine--glycine ligase [Nitratiruptor sp. SB155-2]
 gi|151422941|dbj|BAF70445.1| phosphoribosylamine--glycine ligase [Nitratiruptor sp. SB155-2]
          Length = 427

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L++YN+P A+ +    +  A   I  L  P  VVK+     G+              
Sbjct: 105 KNFLKRYNIPTARYIETDILDEAAEFIDEL-EPPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +        +L      +  GP G RV    +E+  D
Sbjct: 150 GVIIAQSREEAKEAAANML----SGEAFGPAGQRV---VIEEYLD 187


>gi|224371769|ref|YP_002605933.1| SucD4 [Desulfobacterium autotrophicum HRM2]
 gi|223694486|gb|ACN17769.1| SucD4 [Desulfobacterium autotrophicum HRM2]
          Length = 897

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 86/250 (34%), Gaps = 28/250 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A A+L  Y +PV      SS  AA    +T+ GP   +K                 +D 
Sbjct: 500 EAMAVLAAYAIPVVATHEASSPEAAAGLAETIGGPT-ALKIV--------SPDIIHKSDV 550

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYLSLLVD 125
            G      +   V  +   +L      +      G  V    V        EL + +  D
Sbjct: 551 SGVSLNLETPDVVCKNAAAMLERVRHLRPDAHFQGFTVQP-MVH--RPHAHELIIGMADD 607

Query: 126 RTSGMVAFIASTQGGMDIEEVAKD---YPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
              G V  +    GGM +E +       P    KL     +   +     L     + G 
Sbjct: 608 ALFGPVLMVG--HGGMAVEVIGDKALALPPLNMKLA--HEVMARTRVYRLLQGYPGMPGA 663

Query: 183 ARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGRLRVLDSKISF---DDNALYR--- 235
                      + +  CD  D++ LEINPL+   +G + VLD++I        A+ R   
Sbjct: 664 NLDSIALTLVKISQLVCDIADIAELEINPLLADAHG-VLVLDARIKLVKAICPAIDRLAI 722

Query: 236 HLDIQELRDV 245
           H   +EL ++
Sbjct: 723 HPYPKELEEI 732


>gi|319786016|ref|YP_004145491.1| phosphoribosylamine/glycine ligase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464528|gb|ADV26260.1| phosphoribosylamine/glycine ligase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 430

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 109 AKDFLARHGIPT-AFYAVHTQVDAALAYIREKGAPIVVKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +R++L         G  G+RV    +E+  +     ++S++ D  
Sbjct: 155 -GVIVAMTLEEAEAAVRDML----SGNAFGDAGARV---VIEEFLEGEEASFISMV-DGK 205

Query: 128 SGMVA 132
           + +  
Sbjct: 206 TALPM 210


>gi|307544121|ref|YP_003896600.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Halomonas
           elongata DSM 2581]
 gi|307216145|emb|CBV41415.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Halomonas
           elongata DSM 2581]
          Length = 370

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 31/125 (24%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL  +  +P     ++ S  A E A++ L  P+ V KS +  G  GK            
Sbjct: 99  KALFDRLGIPTPAYRLVDSAEALEDAVRELGTPV-VAKS-VTEGYDGK------------ 144

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +        R I    LI               VE   D +RE  +S++  R  
Sbjct: 145 GQAVIKTPSEAAEAWRSINHPRLI---------------VEAFVDFVRE--VSIIAVRGR 187

Query: 129 GMVAF 133
                
Sbjct: 188 DGQVV 192


>gi|229542648|ref|ZP_04431708.1| phosphoribosylamine/glycine ligase [Bacillus coagulans 36D1]
 gi|229327068|gb|EEN92743.1| phosphoribosylamine/glycine ligase [Bacillus coagulans 36D1]
          Length = 416

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 25/129 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A   V S    AE  I+    P+ V+K+   A G+             
Sbjct: 106 AKELMQKYSIPTADYRVFSDYAEAEKHIEKKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  +       +R  ++G           G   N V VE+      E  L   V  
Sbjct: 152 -GVTVAMTPGEAKDALRAALIGKKF--------GEASNQVVVEEFLK-GEEFSLMAFVRE 201

Query: 127 TSGMVAFIA 135
                  IA
Sbjct: 202 EEVYPMVIA 210


>gi|300112977|ref|YP_003759552.1| phosphoribosylamine/glycine ligase [Nitrosococcus watsonii C-113]
 gi|299538914|gb|ADJ27231.1| phosphoribosylamine/glycine ligase [Nitrosococcus watsonii C-113]
          Length = 437

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+    S V  A + IKT   P+ VVK+   A G+             
Sbjct: 108 AKEFLTRWGIPTARYQTFSQVEPAIAYIKTEGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ +  +LG        G  G     V VE+      E    ++ D  
Sbjct: 154 -GVVVARTEEEAIAAVHSMLG----DGVFGEAGC---QVVVEEFLR-GEEASFIVMSDGE 204

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
             +   +AS+Q    +EE  +
Sbjct: 205 HVLP--LASSQDHKALEEGDR 223


>gi|219851648|ref|YP_002466080.1| pyruvate carboxylase subunit A [Methanosphaerula palustris E1-9c]
 gi|219545907|gb|ACL16357.1| Carbamoyl-phosphate synthase L chain ATP-binding [Methanosphaerula
           palustris E1-9c]
          Length = 491

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 24/124 (19%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK ++RK  VPV  G    ++S+  A+     +  P+ +VK+    GG            
Sbjct: 121 AKHMMRKAGVPVLPGTPDGVTSIDEAKKVAAEIGYPV-IVKASAGGGGI----------- 168

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+++ +    + S +    G  +     G        V++E      R +   +L D
Sbjct: 169 ---GMQIVNDEDGLESALST--GMRIAESAFGDP-----TVFIEKYLIKPRHIEFQVLAD 218

Query: 126 RTSG 129
           R   
Sbjct: 219 RRGH 222


>gi|220928068|ref|YP_002504977.1| carbamoyl phosphate synthase large subunit [Clostridium
           cellulolyticum H10]
 gi|219998396|gb|ACL74997.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           cellulolyticum H10]
          Length = 1071

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 20/109 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K ++P  +G  I ++  A +A   L  P+ V  S +  G                G
Sbjct: 675 EILEKTDIPRPQGKTIFTLDEAIAAANELGYPVLVRPSYVLGG---------------QG 719

Query: 70  VRVESSLKSVISDIREILGSTLITK----QTGPTGSRVNCVYVEDGADI 114
           + +  + K V   + EI+  T+            G  +    + DG +I
Sbjct: 720 MEIAYNDKDVKEFM-EIINRTVQEHPILIDKYMMGKEIEVDAICDGEEI 767


>gi|115475147|ref|NP_001061170.1| Os08g0191200 [Oryza sativa Japonica Group]
 gi|40253644|dbj|BAD05587.1| putative glycinamide ribonucleotide synthetase [Oryza sativa
           Japonica Group]
 gi|40253815|dbj|BAD05752.1| putative glycinamide ribonucleotide synthetase [Oryza sativa
           Japonica Group]
 gi|113623139|dbj|BAF23084.1| Os08g0191200 [Oryza sativa Japonica Group]
 gi|125560417|gb|EAZ05865.1| hypothetical protein OsI_28100 [Oryza sativa Indica Group]
 gi|125602447|gb|EAZ41772.1| hypothetical protein OsJ_26312 [Oryza sativa Japonica Group]
 gi|215695422|dbj|BAG90613.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741075|dbj|BAG97570.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 527

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    +    A+  +K    P+ VVK+   A G+              
Sbjct: 201 KKLCDKYNIPTAKYRTFTDPAEAKQYVKDQGAPI-VVKADGLAAGK-------------- 245

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      I  +L    +    G  G   + V +E+  +     + +L+ D  +
Sbjct: 246 GVVVAMTLDEAFEAIDSML----VQGSFGSAG---SRVIIEEYLEGEEASFFALV-DGEN 297

Query: 129 GMVA 132
            +  
Sbjct: 298 ALPL 301


>gi|209527639|ref|ZP_03276138.1| CoA-binding domain protein [Arthrospira maxima CS-328]
 gi|209491921|gb|EDZ92277.1| CoA-binding domain protein [Arthrospira maxima CS-328]
          Length = 916

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 31/237 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K LL  Y +PV    + S V  A +A + +  P+ +                  
Sbjct: 509 LTEFESKELLALYGIPVVDTRMASRVEEALAAAEAIGYPVAL----------KLLSETIT 558

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLS 121
                GGV++  +    +    E + S++  K        V    V++   +   EL + 
Sbjct: 559 HKTDVGGVKLNLTSAEEVQAAYEAIASSVAEKVGPEHFQGVT---VQEMLKLDGYELIIG 615

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVASLC 174
             +D   G    +  T G     ++ + +  +I  L + PL       +   ++   +L 
Sbjct: 616 SSLDPQFG-PVLLFGTGG-----QLVEVFKDRI--LALPPLNTTLARRMMEQTKIYKALL 667

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +             L         ++  +  ++INPL+  ++ RL  LD+++   D
Sbjct: 668 GVRGRPPVDMDALEQLMVRFSHIVVEQPWIKEIDINPLVASED-RLVALDARVVLHD 723


>gi|169833688|ref|YP_001693580.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168996190|gb|ACA36802.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|126458740|ref|YP_001055018.1| carbamoyl phosphate synthase large subunit [Pyrobaculum
           calidifontis JCM 11548]
 gi|126248461|gb|ABO07552.1| carbamoyl-phosphate synthase large subunit [Pyrobaculum
           calidifontis JCM 11548]
          Length = 1025

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/226 (11%), Positives = 68/226 (30%), Gaps = 44/226 (19%)

Query: 8   AKALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           ++ L     R+  +P        S   A +    +  P+ V               +   
Sbjct: 125 SRDLFQRAMREAGIPTPPSKPARSPEEALAVAAEIGYPVVV---------------RVSF 169

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                G  V  + +++ + + +    + I +           V VE   +  +E+   ++
Sbjct: 170 NLGGAGAFVAKTEEALRARVYKAFAQSAIGE-----------VLVEKYLEGWKEVEFEVV 218

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            D    + A +        +E V          +++ P + +T E+          +   
Sbjct: 219 RDSYDNVAAVVC-------MENVDPMGVHTGDSIVVAPCLTLTDEEYQKARDISIGVARA 271

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
           +EL G+  +     +    +   + +  +   + L    +G     
Sbjct: 272 IELVGEGNVQVAVNYAGPEQYAIETNPRMSRSSALASKASGYPLAY 317



 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +        +S+  A    + L  P+ V  S +  G
Sbjct: 662 KLLDKLGIRQPPWFTATSIDEALKLAEELGYPVLVRPSYVLGG 704


>gi|90577829|ref|ZP_01233640.1| putative acetyltransferase [Vibrio angustum S14]
 gi|90440915|gb|EAS66095.1| putative acetyltransferase [Vibrio angustum S14]
          Length = 912

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 89/252 (35%), Gaps = 35/252 (13%)

Query: 2   NIH--E-YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           NIH  E ++A+ +L  Y        +      A    + +  P+ V         + +  
Sbjct: 495 NIHHLETHEARPILECYGFNTLPTWIALDAVEAVHIAEQIGYPVAV---------KLRSP 545

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LR 116
                ++  G V    +   V +  + I     +   T     R++ + V+  AD    +
Sbjct: 546 DIRHKSEIHGVVLHLRTAAEVETAAQAIFDRVAMLYPTA----RIDGLLVQRMADRSGAQ 601

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCD 175
           EL + +  D   G V  +       DI   A         + I PL + +    V     
Sbjct: 602 ELRIDVHNDPIFGPVILMGEDNAHWDIHRDAA--------VGIPPLNMALARYMVIDALK 653

Query: 176 MLELQGQARIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             +++ ++ ++  D+         + +   D  ++  L I+PL+I  +  L VLD+ +  
Sbjct: 654 TGKIKQRSALEKIDIPALCNLLVKISQLIIDCPEIKALNIHPLLISGS-DLTVLDASMDI 712

Query: 229 DDNALYRHLDIQ 240
              +  +   + 
Sbjct: 713 QSFSGDKQKRLA 724


>gi|91787102|ref|YP_548054.1| CoA-binding [Polaromonas sp. JS666]
 gi|91696327|gb|ABE43156.1| CoA-binding protein [Polaromonas sp. JS666]
          Length = 903

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 34/232 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           A+ALLR Y +P  + V    V  A +A   +  P+   +V  Q+              +D
Sbjct: 504 AQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQV-----------IHKSD 552

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G V   +S ++V +   ++ G  T +  Q    G  V  +    G     EL + +  
Sbjct: 553 VGGVVLGLASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPG---AHELIVGIAT 609

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA---SLCDML-ELQ 180
           D   G V  +   +GG  +E            + + PL    + D+     L  +L   +
Sbjct: 610 DAVFGPVLLLG--EGGTAVELRKDHA------VALPPLNTSLARDLVTRSRLAPLLAGYR 661

Query: 181 GQARIDGGDLFPNLYKAF-CDKDMSL---LEINPLIIMKNGRLRVLDSKISF 228
           G+   D   L   L +      D+     L+INPL++ + G +  LD+++  
Sbjct: 662 GRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERG-VLALDARVRL 712


>gi|242000720|ref|XP_002435003.1| hypothetical protein IscW_ISCW005666 [Ixodes scapularis]
 gi|215498333|gb|EEC07827.1| hypothetical protein IscW_ISCW005666 [Ixodes scapularis]
          Length = 271

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 354 PLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           P ++   G  VD    LIA S L ++   +LD+AA+      
Sbjct: 26  PSLLARAGTQVDEAKALIATSKLKILACDNLDEAAKMARAMS 67


>gi|218246268|ref|YP_002371639.1| acetyl-CoA carboxylase biotin carboxylase subunit [Cyanothece sp.
           PCC 8801]
 gi|218166746|gb|ACK65483.1| acetyl-CoA carboxylase, biotin carboxylase [Cyanothece sp. PCC
           8801]
          Length = 449

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 39/272 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   VI +   A+   + +  P+ ++K+    GGRG  R     ++
Sbjct: 120 AKKTMQKAGVPTVPGSWGVIETEQEAQEIARDIGYPM-MIKATAGGGGRGM-RLVREDSE 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                +                         G  G     VY+E   +  R +   +L D
Sbjct: 178 FSRAFQSAQGEAEAA---------------FGNKG-----VYLEKFIERPRHIEFQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
                   +   +    I+   +   ++     + P + +   E        ++  G   
Sbjct: 218 SQGN---VVHLGERDCSIQRRHQKLLEEAPSPFLTPELRLKMGEAAVKAAKSIDYVGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-------RLRVLDSKISFDDNALYRH 236
           ++   D   N Y  F + +  +   +P+  M +G              K+SF  + +   
Sbjct: 275 VEFLVDNQGNFY--FMEMNTRIQVEHPVTEMISGLDLIAEQIRIAQGEKLSFTQDQVNLQ 332

Query: 237 LDIQELRDVSEEDSREIEAKQHNLS-YIALDG 267
               E R  +E+           +S Y+   G
Sbjct: 333 GHAIECRINAEDPDHNFRPHPGKISAYLPPGG 364


>gi|163858101|ref|YP_001632399.1| acetyl-CoA synthetase [Bordetella petrii DSM 12804]
 gi|163261829|emb|CAP44131.1| acetyl-CoA synthetase [Bordetella petrii]
          Length = 707

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 38/235 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK++L +  V V  G V +++  A      + GP+               +      
Sbjct: 491 EREAKSILARAGVRVPTGGVAATLEEALHLSAGIDGPVV-------------AKIVSQDI 537

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLSLL 123
             K  +    +     ++I +     L   +     +R++ + +E+       E  + + 
Sbjct: 538 LHKSDIGGVRTGLRTDAEITDAWHGILENVRKADPHARIDGILIEEMIAQRGVETLVGVH 597

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE---LQ 180
            D   G         GG+ +E       + +          +T      +        L 
Sbjct: 598 EDPLFG-PVITFGL-GGIFVEVFRDVSRRLLP---------LTPAQAREMIAETRCYTLL 646

Query: 181 GQARIDGGDLFPNLYKAFCD---------KDMSLLEINPLIIMKNGRLRVLDSKI 226
              R         L +               +  L++NP+I+   G +  +D+ +
Sbjct: 647 KGVRGQAAADIEALVQLLLAVSDFVIQGPLSVHELDLNPVIVGPEGAI-AVDAVL 700


>gi|154506076|ref|ZP_02042814.1| hypothetical protein RUMGNA_03618 [Ruminococcus gnavus ATCC 29149]
 gi|153793575|gb|EDN75995.1| hypothetical protein RUMGNA_03618 [Ruminococcus gnavus ATCC 29149]
          Length = 1067

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEECEIPRPTGGTVFTAEEAKEVANRLGYPVLVRPSYVL-GGQGMQIAINDN------ 725

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   I  I  I     I       G  +    V DG DI
Sbjct: 726 -----DIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGEDI 765


>gi|115395960|ref|XP_001213619.1| carbamoyl-phosphate synthase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114193188|gb|EAU34888.1| carbamoyl-phosphate synthase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 1173

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ + + +V  A  A + +  P+ V  +    G               
Sbjct: 223 AKAL-NEINIPIAESIAVGTVDEALKAAEEVGYPIIVRSAYALGGL-------------- 267

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 268 -GSGFANNPEELKNLASRSL-------------TLAPQILVEKSLRGWKEVEYEVVRDAD 313

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 314 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 366

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 367 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 415


>gi|25010117|ref|NP_734512.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           NEM316]
 gi|77413872|ref|ZP_00790049.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae 515]
 gi|23094468|emb|CAD45687.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160055|gb|EAO71189.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae 515]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|239627143|ref|ZP_04670174.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517289|gb|EEQ57155.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 428

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A      S   A + ++  P P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYETFDSPEEALAYLEDAPIPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +     +R +    ++ KQ G  G   + + VE+         +S+L    
Sbjct: 152 -GVLICNTREEAKEGVRTL----MLDKQFGSAG---DRIVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKIMTSAQD 212


>gi|76788387|ref|YP_328769.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae A909]
 gi|77405241|ref|ZP_00782338.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae H36B]
 gi|76563444|gb|ABA46028.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae A909]
 gi|77176137|gb|EAO78909.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae H36B]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|114331393|ref|YP_747615.1| cyanophycin synthetase [Nitrosomonas eutropha C91]
 gi|114308407|gb|ABI59650.1| cyanophycin synthetase [Nitrosomonas eutropha C91]
          Length = 862

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K LLR   +PV  G  ++S   A  A   +  P+ VVK Q    GRG
Sbjct: 208 KILLRAAGIPVPTGRPVTSADDAWVAACEIGAPI-VVKPQDGNHGRG 253


>gi|22536228|ref|NP_687079.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           2603V/R]
 gi|76798522|ref|ZP_00780756.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           18RS21]
 gi|77411233|ref|ZP_00787584.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           CJB111]
 gi|22533047|gb|AAM98951.1|AE014193_16 phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           2603V/R]
 gi|76586117|gb|EAO62641.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           18RS21]
 gi|77162756|gb|EAO73716.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae
           CJB111]
          Length = 421

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|124027199|ref|YP_001012519.1| carbamoyl phosphate synthase large subunit [Hyperthermus butylicus
           DSM 5456]
 gi|167006440|sp|A2BJL3|CARB_HYPBU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|123977893|gb|ABM80174.1| Carbamoyl-phosphate synthase large chain [Hyperthermus butylicus
           DSM 5456]
          Length = 1073

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 59/210 (28%), Gaps = 27/210 (12%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           K  +PV      +SV  A  A   +  P+ V               +       GG  V 
Sbjct: 138 KAGLPVPPSTPATSVEEALRAANEIGYPVIV---------------RVSFNLGGGGSLVA 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S + +       L        TG        V VE      +E+   ++ D+   MVA 
Sbjct: 183 WSREEL----ERWLVRAFAFSGTGE-------VLVEKYLHYWKEIEYEVVRDQYGNMVAV 231

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPN 193
                         +       + L D    +  E    + + + L G+  +       +
Sbjct: 232 ACLENADPMGVHTGESVVIAPCQTLTDQEYQLLREASLRVAEAIGLVGEGNVQLALNPRD 291

Query: 194 LYKAFC-DKDMSLLEINPLIIMKNGRLRVL 222
            ++ +  + +  +   + L     G     
Sbjct: 292 SWEYYVIETNPRMSRSSALASKATGYPLAY 321



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 58/183 (31%), Gaps = 38/183 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +        SS+       +++  P+ V  S + +G                 
Sbjct: 682 QLLEELGIKQPSWTAASSIEEVLKFAESVGYPVLVRPSYVLSG---------------SA 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S + + S I +         +  P    V   ++ED  +   +   ++   R + 
Sbjct: 727 MKIAWSPEELKSYIEQ-------AARVSPRYPVVVSKFLEDAVEAEID---AVGDSRRTV 776

Query: 130 MVAFIASTQGGMDIEEV-----AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
                    GG+   +          P+   + +I            +L ++LE++G   
Sbjct: 777 GTVIEHVEPGGVHSGDSTMVIPWFSLPETAVREMI--------RIAETLNEVLEIKGPFN 828

Query: 185 IDG 187
           I  
Sbjct: 829 IQF 831


>gi|308161090|gb|EFO63550.1| Acyl-CoA synthetase [Giardia lamblia P15]
          Length = 905

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 86/265 (32%), Gaps = 49/265 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFK 60
           ++EY+A  L +   + V +        +  S IKT   P   YVVK  I           
Sbjct: 35  LYEYEAYELFKLIGIKVPEFRYFPLHSSLASQIKTFMKPNQKYVVKCHIPG--------- 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---- 116
            L     GG+ +     ++ +D+   +            G  +  V V + A        
Sbjct: 86  CLHKTDIGGIMLFKDRSNIEADLEPFVNKL------KSAGHNLEGVIVVEMAKFYDSGMS 139

Query: 117 --ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
             EL +S   D   G         GG  +E   K   Q    + +   I +TS   A   
Sbjct: 140 NGELLISAFEDTGFGPCVCFG--LGGTGVEYYKKVMRQGHSSIFLPSWINLTSSTAAMAA 197

Query: 175 --------DMLE---------LQGQARIDGGDLFPNLYKAFCDKDMSL------LEINPL 211
                    +L                +    +   L + +C  +++       +EINP 
Sbjct: 198 LERLPVSQFLLGKVRGSKRLISSIDQVVSPLSILQALLRHYCRNNLTSKYIIREIEINPA 257

Query: 212 IIMKN-GRLRVLDSKISFDDNALYR 235
           ++ K  G L  LD+ +    N  Y+
Sbjct: 258 VVEKETGNLLALDAVVRVLPNPGYK 282


>gi|156057445|ref|XP_001594646.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154702239|gb|EDO01978.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 612

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 72/233 (30%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K     N+P+A+ V +S+V  A  A K +  P+ V  +    G            
Sbjct: 211 RDLFAKALGEINIPIAQSVAVSTVDEALEAAKGIGYPIIVRAAYALGGL----------- 259

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E+   ++ 
Sbjct: 260 ----GSGFANNEEELRNMASRSLTLS-------------PQILVEKSLKGWKEVEYEVVR 302

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D ++  +          ++E            +++ P   ++ E+          +   L
Sbjct: 303 DASNNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHL 355

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 356 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 407


>gi|157382748|gb|ABV48811.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 10/89 (11%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGA----DQDKVAAAFKIITSDSSVKG 323
             MV G G ++   D +   G     AN+ +  G       ++ V   F ++T +   +G
Sbjct: 1   WTMVAGGGASVVYADTVADLGAVKELANYGEYSGNPSRTETREYVKTVFDLMTRERHPQG 60

Query: 324 ILINIFGG-IMRCDVLVK---GILSAVKE 348
             I I GG I     + K   GI+ A+ E
Sbjct: 61  DKILIIGGAIANFTDVAKTFDGIIDAMNE 89


>gi|319744015|gb|EFV96395.1| phosphoribosylamine-glycine ligase [Streptococcus agalactiae ATCC
           13813]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|300722280|ref|YP_003711564.1| putative acyl-CoA synthetase , ATP-binding [Xenorhabdus nematophila
           ATCC 19061]
 gi|297628781|emb|CBJ89359.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding
           [Xenorhabdus nematophila ATCC 19061]
          Length = 844

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 56/145 (38%), Gaps = 19/145 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      +  +   A    + +  P+ +         + +    
Sbjct: 445 LDTHEVQ--PILEAYGLNTLPTWIAHTSDDAVKIAEKIGYPVAL---------KLRSPDI 493

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V +  + I+      +Q  P  +R++ + V+  A+    +EL
Sbjct: 494 PHKSEVQGVMLYLRNADEVKTAAQAIIERV---RQNFPQ-ARIHGLLVQSMANRAGAQEL 549

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDI 143
            +S+  D   G +  +   +GG D 
Sbjct: 550 RISIEQDEIFGPLIMLG--EGGSDW 572


>gi|284175390|ref|ZP_06389359.1| hypothetical protein Ssol98_12180 [Sulfolobus solfataricus 98/2]
 gi|261603105|gb|ACX92708.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus solfataricus 98/2]
          Length = 660

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 32/226 (14%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++   ++  P+ +                 L   
Sbjct: 465 FEALKLMEIYGIRTPKWGLANNENEAQNVADSIGYPVVM----------KISPDTPLHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 ELKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEVFIGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL--QGQA 183
              G V  I S  GG+ +E V K+    +  +  D    +  E  + + DML    +G  
Sbjct: 561 PVFGHVILIGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVE--SKIHDMLNARKRGYD 615

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                     + +   D ++  ++INPL + +NG    +D +I  +
Sbjct: 616 ESSIIRAITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIVLE 660


>gi|212541376|ref|XP_002150843.1| carbamoyl-phosphate synthase, large subunit [Penicillium marneffei
           ATCC 18224]
 gi|210068142|gb|EEA22234.1| carbamoyl-phosphate synthase, large subunit [Penicillium marneffei
           ATCC 18224]
          Length = 1181

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ +  ++V  A  A   +  P+ V  +    G               
Sbjct: 231 AKAL-NEINIPIAESIACNTVDEALEAADQIGYPIIVRSAYALGGL-------------- 275

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             S    + VE      +E+   ++ D  
Sbjct: 276 -GSGFANNREELKNLSSRSL-------------SLAPQILVEKSLKGWKEVEYEVVRDAK 321

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 322 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 374

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 375 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 423


>gi|149185203|ref|ZP_01863520.1| phosphoribosylamine-glycine ligase [Erythrobacter sp. SD-21]
 gi|148831314|gb|EDL49748.1| phosphoribosylamine-glycine ligase [Erythrobacter sp. SD-21]
          Length = 425

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 26/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L ++  +P A+    +S+ AA  A+K    P +V+K+   A G+              
Sbjct: 107 KELCQRAGIPTARFERCTSLEAAWGALKKFDAP-FVLKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +       + E+      +          + V +E         + +L      
Sbjct: 152 GVVIAETRDEAQEALSEMFDGKFGSAG--------SEVVIEQFLTGEEASFFALT---DG 200

Query: 129 GMVAFIASTQG 139
             +  +AS Q 
Sbjct: 201 ETIVPLASAQD 211


>gi|147669652|ref|YP_001214470.1| carbamoyl-phosphate synthase large subunit [Dehalococcoides sp.
           BAV1]
 gi|146270600|gb|ABQ17592.1| carbamoyl-phosphate synthase large subunit [Dehalococcoides sp.
           BAV1]
          Length = 1079

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL K   PV     +++   A      +  P+ +  +    G                
Sbjct: 130 KELLTKIGEPVPPSETVTTAEDALRVAHMIGLPVVIRPAYTLGG---------------T 174

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +   V               QTG   S ++ + VE      +E+   ++  R  
Sbjct: 175 GGGFAHNWDEVEEVA-----------QTGLNASPIHQILVEKSVAGWKEIEYEVM--RDG 221

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
                        D   +       I  + +  L    S+ +      +   L ++G   
Sbjct: 222 ADNCITICNMENFDP--MGVHTGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCN 279

Query: 185 IDGG 188
           +   
Sbjct: 280 VQLS 283



 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P A G  I+S+  A S   ++  P+ V  S +  GGR      E+ +D+   
Sbjct: 674 RLLSEMGIPQAPGAGITSLDEALSIADSIGYPVVVRPSYVL-GGRAM----EIVSDASDL 728

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           VR  S+   + +    ++   L+       G  V    + DG
Sbjct: 729 VRYMSAAIELNTGHPILIDKYLV-------GKEVEVDAIADG 763


>gi|302555344|ref|ZP_07307686.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302472962|gb|EFL36055.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 582

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 76/217 (35%), Gaps = 17/217 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    + + V  A +      GP+ +                 L    
Sbjct: 29  EGKVIADAYGIAVPGEELATDVDEAVAFAARFGGPVVM----------KIVSPDILHKTD 78

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV V        +D+R    + +   +     +R++ V V++     +E+ +  + D 
Sbjct: 79  AGGVIVGV---EGAADVRAAFHTIIDNARAYDAAARISGVQVQELLPKGQEVIVGAVTDP 135

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           T G V       GG+ +E +     +       + L  + S   A +   +    G  R 
Sbjct: 136 TFGKVVAFG--LGGVLVEVLKDVTFRLAPVKPDEALSMLDSIRSAEILRGVRGQAGVDRW 193

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
              +    + +   D  +++ +++NP+I    G +  
Sbjct: 194 AVAEQIRRVSELVADFPEIAEVDLNPVIATAEGAVAA 230


>gi|73748891|ref|YP_308130.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides sp.
           CBDB1]
 gi|73660607|emb|CAI83214.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides sp.
           CBDB1]
          Length = 1089

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL K   PV     +++   A      +  P+ +  +    G                
Sbjct: 140 KELLTKIGEPVPPSETVTTAEDALRVAHMIGLPVVIRPAYTLGG---------------T 184

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +   V               QTG   S ++ + VE      +E+   ++  R  
Sbjct: 185 GGGFAHNWDEVEEVA-----------QTGLNASPIHQILVEKSVAGWKEIEYEVM--RDG 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
                        D   +       I  + +  L    S+ +      +   L ++G   
Sbjct: 232 ADNCITICNMENFDP--MGVHTGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCN 289

Query: 185 IDGG 188
           +   
Sbjct: 290 VQLS 293



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P A G  I+S+  A S   ++  P+ V  S +  GGR      E+ +D+   
Sbjct: 684 RLLSEMGIPQAPGAGITSLDEALSIADSIGYPVVVRPSYVL-GGRAM----EIVSDASDL 738

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           VR  S+   + +    ++   L+       G  V    + DG
Sbjct: 739 VRYMSAAIELNTGHPILIDKYLV-------GKEVEVDAIADG 773


>gi|34557456|ref|NP_907271.1| biotin carboxylase [Wolinella succinogenes DSM 1740]
 gi|34483172|emb|CAE10171.1| BIOTIN CARBOXYLASE (ACCC) [Wolinella succinogenes]
          Length = 448

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            AK +++K  VPV  G    +S    A+   K +  P+ ++K+    GGRG
Sbjct: 122 MAKEVMKKAGVPVIPGSEGALSGYEEAKEEAKKIGYPV-ILKASAGGGGRG 171


>gi|18312299|ref|NP_558966.1| carbamoyl phosphate synthase large subunit [Pyrobaculum aerophilum
           str. IM2]
 gi|22095515|sp|Q8ZY48|CARB_PYRAE RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|18159745|gb|AAL63148.1| carbamoyl-phosphate synthase large subunit [Pyrobaculum aerophilum
           str. IM2]
          Length = 1024

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 14/91 (15%)

Query: 8   AKALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           ++ L     R+  +PV       S   A    + L  P+ V   ++     G G F    
Sbjct: 124 SRDLFQKAMREAGIPVPPSSPAKSPEEAIEIARYLGYPVVV---RVSFNLGGAGAFVARS 180

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITK 94
            ++              +  +  +G  L+ K
Sbjct: 181 EEALKARIY-------KAFAQSAIGEVLVEK 204


>gi|307126280|ref|YP_003878311.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           670-6B]
 gi|306483342|gb|ADM90211.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           670-6B]
 gi|332076510|gb|EGI86972.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA17545]
 gi|332077364|gb|EGI87825.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA41301]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|303244549|ref|ZP_07330883.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Methanothermococcus okinawensis IH1]
 gi|302485097|gb|EFL48027.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Methanothermococcus okinawensis IH1]
          Length = 479

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 44/191 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K       PV K   + SV  A +A+  L  P+ V  +    G            
Sbjct: 128 RELFNKAMEEIGEPVTKSHAVHSVEEALNAVAELGYPVIVRPAFTLGG------------ 175

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S GG+    + + +     + L  +L           +N V +++     +E    ++ 
Sbjct: 176 -SGGGI--AHNEEELREITEKGLNYSL-----------INQVLIDESVLGWKEYEYEVM- 220

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-------DVASLCDML 177
            R +     +      MD   +     + I   ++ P   ++ E           +   L
Sbjct: 221 -RDAKDNCIVVCNMENMDP--MGIHTGESI---VVAPSQTLSDEVHQRLRNAALKIIKHL 274

Query: 178 ELQGQARIDGG 188
            ++G   +   
Sbjct: 275 RIEGGCNVQFA 285


>gi|289432887|ref|YP_003462760.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides sp.
           GT]
 gi|288946607|gb|ADC74304.1| carbamoyl-phosphate synthase, large subunit [Dehalococcoides sp.
           GT]
          Length = 1079

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL K   PV     +++   A      +  P+ +  +    G                
Sbjct: 130 KELLTKIGEPVPPSETVTTAEDALRVAHMIGLPVVIRPAYTLGG---------------T 174

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +   V               QTG   S ++ + VE      +E+   ++  R  
Sbjct: 175 GGGFAHNWDEVEEVA-----------QTGLNASPIHQILVEKSVAGWKEIEYEVM--RDG 221

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
                        D   +       I  + +  L    S+ +      +   L ++G   
Sbjct: 222 ADNCITICNMENFDP--MGVHTGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCN 279

Query: 185 IDGG 188
           +   
Sbjct: 280 VQLS 283



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P A G  I+S+  A S   ++  P+ V  S +  GGR      E+ +D+   
Sbjct: 674 RLLSEMGIPQAPGAGITSLDEALSIADSIGYPVVVRPSYVL-GGRAM----EIVSDASDL 728

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           VR  S+   + +    ++   L+       G  V    + DG
Sbjct: 729 VRYMSAAIELNTGHPILIDKYLV-------GKEVEVDAIADG 763


>gi|212716892|ref|ZP_03325020.1| hypothetical protein BIFCAT_01836 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660177|gb|EEB20752.1| hypothetical protein BIFCAT_01836 [Bifidobacterium catenulatum DSM
           16992]
          Length = 1126

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLDEAREAAHNIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLRKYVDRAL--KEAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVEEAGAESARSDIAHSLEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R       +      +D   V       I    + P+  +T  +   L D+
Sbjct: 222 -RDKKDNVVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 267


>gi|119872688|ref|YP_930695.1| carbamoyl phosphate synthase large subunit [Pyrobaculum islandicum
           DSM 4184]
 gi|119674096|gb|ABL88352.1| carbamoyl-phosphate synthase large subunit [Pyrobaculum islandicum
           DSM 4184]
          Length = 1025

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 68/225 (30%), Gaps = 44/225 (19%)

Query: 8   AKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           ++ L +K      +P+       S   A    + +  P+ V               +   
Sbjct: 125 SRDLFQKAMREVGIPIPPSSPARSPEEALKVAREIGYPVVV---------------RVSF 169

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                G  V  S + + + + +    + I +           V VE   +  +E+   ++
Sbjct: 170 NLGGAGAFVARSEEDLRARVYKAFAQSAIGE-----------VLVEKYLEGWKEIEFEVV 218

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            D    + A +        +E V          +++ P + +T E+          +   
Sbjct: 219 RDAYDNVAAVVC-------MENVDPMGVHTGDSIVVAPCLTLTDEEYQKARNISIGVARA 271

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           +EL G+  +     +    +   + +  +   + L    +G    
Sbjct: 272 IELVGEGNVQVAVNYAGPEQYAIETNPRMSRSSALASKASGYPLA 316



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +         S+  A    + L  P+ V  S +  G
Sbjct: 662 ELLEKLGIKQPPWFAARSLEEAAKLAEALGYPVLVRPSYVLGG 704


>gi|330507164|ref|YP_004383592.1| carbamoyl-phosphate synthase, large subunit [Methanosaeta concilii
           GP-6]
 gi|328927972|gb|AEB67774.1| carbamoyl-phosphate synthase, large subunit [Methanosaeta concilii
           GP-6]
          Length = 1080

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 43/213 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K   PV +   ++++  A   ++ L  PL V  +    G             S G
Sbjct: 133 KQAMQKVGEPVPESRAVNTLDEALEVMEELGLPLVVRPAYTLGG-------------SGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + ++                G   SR++ V +E+      EL   ++  R S
Sbjct: 180 GI--AKTREELLQIC-----------DLGLKRSRISQVLLEESVGGWTELEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                       MD   +     + I    I    D  I +      ++   L+++G   
Sbjct: 225 NDTCITICNMENMDP--MGIHTGESIVVTPIQTLTDHEIQMLRSAAINIIRALKIEGGCN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I           A  D +  ++E+NP +   + 
Sbjct: 283 IQF---------AVKDGEYRVIEVNPRVSRSSA 306



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 61/201 (30%), Gaps = 36/201 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           AL+ + N+P     +  S   A      +  P+ V  S +  G   +  + E   D    
Sbjct: 683 ALMTRLNIPQPNAGIAFSPAEAREVAAKIGYPVLVRPSYVLGGRAMEIVYDEKGLDVY-- 740

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 ++  +   RE                  + V ++D      E+ +  + D    
Sbjct: 741 ------MQEAVRVSRE------------------HPVLIDDFLQDAVEIDVDAVCDGKDV 776

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           ++  I        IEE           +    L GV  E V      + L          
Sbjct: 777 LIGAIM-----EHIEEAGIHSGDSACMIPPQTLPGVVLEVVRDYVRKIALGLGVIG---- 827

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              NL  A+ D  + +LE NP
Sbjct: 828 -IVNLQMAYKDGTVYVLEANP 847


>gi|307824195|ref|ZP_07654421.1| CoA-binding domain protein [Methylobacter tundripaludum SV96]
 gi|307734575|gb|EFO05426.1| CoA-binding domain protein [Methylobacter tundripaludum SV96]
          Length = 893

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 38/234 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KA+L  +++PV + + +SS   A  A +T+  P+ V+K  +          +      
Sbjct: 494 ESKAILAAFHIPVNQTIKVSSAKDAMIAAETMRFPV-VLKVNMA---------EFSHKSD 543

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLV 124
            GGVR+  ++ SV       L      KQ  P  + V  + VE        REL + ++ 
Sbjct: 544 IGGVRL--NINSVQEISHHYLEMETAIKQKYPEITEV-GMTVEPMFKSASGRELMIGVVR 600

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSED-------VASLC 174
           D       F      G  I         +I K   + + PL     E           L 
Sbjct: 601 D-----PVF------GPAISVGLGGTMVEILKDSAVALPPLNAYMVEQMIAKTKAARYLE 649

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
              +L    +    D+  N+     +  ++  L+INPLI+ ++G +  +D++I 
Sbjct: 650 AFRQLPVANKQALVDVLLNVSTMVSELPEILELDINPLIVDEHG-VMAVDARIK 702


>gi|209879069|ref|XP_002140975.1| acetyl-CoA synthetase [Cryptosporidium muris RN66]
 gi|209556581|gb|EEA06626.1| acetyl-CoA synthetase, putative [Cryptosporidium muris RN66]
          Length = 966

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 27/143 (18%)

Query: 271 CMVNGAGLAMATMDIIKLYGGA-----------------P----ANFLDVGGGADQDKVA 309
            + N  G A+   D + + GG                  P     N +D+ G A      
Sbjct: 329 ILTNAGGPAVIAADALDISGGELSILPNSIIDRIDQIASPGWSKCNPVDILGDATPQDYV 388

Query: 310 AAFKIITSDSSVKGILINIFG--GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANV-DI 366
              K I  D  V   L+ I     I     + + I+  + ++K  IP++    GAN   +
Sbjct: 389 NILK-ILGDEEVGDGLLIILSPQDITNPTQVAELIIPIINKIKEKIPVICSWMGANEVAM 447

Query: 367 GNRLIAESGLNVITAIDLDDAAQ 389
           G  ++ ++G+  I+  D   AAQ
Sbjct: 448 GQEILVKAGIPEISNPDT--AAQ 468



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 70/243 (28%), Gaps = 33/243 (13%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E ++K +L+ Y +PV +    ++   A    + +  P+ V K           R     +
Sbjct: 520 EVESKQILKAYGLPVNETFTCTTEEEAIKVAQKIGYPV-VCK--------LYSRTFTHKS 570

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-ELYLSLL 123
           D  G      S   +    + I  +              + V +E        EL +   
Sbjct: 571 DIGGVFLNIKSDDELREAYKSIKYNAYSAGSYTNQDEVFSGVTIEAMLSGQILELIIGST 630

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE----- 178
            D        +  T GG+ +E         I    ++  +         +          
Sbjct: 631 TD-LQMGPLILFGT-GGIYVEIFKDT---AIALPPLNDTLAKHLMMRTKIYKAFGCSSKR 685

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMK-----------NGRLRVLDSK 225
               +  +   +         D    +LE  INPL I             +  + VLD++
Sbjct: 686 FPYVSIDELALILTRFSNMVVDLSCYVLECDINPLCISIKNDQHSTNTLFSNNISVLDAR 745

Query: 226 ISF 228
            + 
Sbjct: 746 FTL 748


>gi|152981863|ref|YP_001355245.1| cyanophycin synthetase [Janthinobacterium sp. Marseille]
 gi|151281940|gb|ABR90350.1| cyanophycin synthetase [Janthinobacterium sp. Marseille]
          Length = 722

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+   VPV +G +++SV  A  A +++  P+ V+K      GRG         D + 
Sbjct: 224 KTLLQSCGVPVPEGRIVNSVADAWDAAESIGLPV-VIKPLDGNHGRGVSTNLNNQKDIEA 282

Query: 69  GVRVES 74
              +  
Sbjct: 283 AFLLAE 288


>gi|149915589|ref|ZP_01904115.1| bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase
           [Roseobacter sp. AzwK-3b]
 gi|149810481|gb|EDM70324.1| bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase
           [Roseobacter sp. AzwK-3b]
          Length = 703

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 37/232 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA L  +++ V +    +   A  +    +  PL +           K      
Sbjct: 499 LSEAEAKAALAGHSLAVPRAERAAEARALSAVAHRIGAPLVI-----------KAEGLGH 547

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLS 121
            +D  G V      ++ ++  R +                 +   VE+     + EL + 
Sbjct: 548 KSDLGGVVLAPDDPQAALAAARRM---------------PCDSWLVEEMVTGAVAELLIG 592

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +L D   G V  +A+  GG   E +A      +     +    + +  +A L +    +G
Sbjct: 593 VLRDPAHGFVLTLAA--GGTLTEIIADSTQLLLPVTAQEIDAALNALRIARLLE--GYRG 648

Query: 182 QARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
           +   D   +   +     Y       +  +EINPLI   + R   +D+ I+ 
Sbjct: 649 KPAADREAIVRAVLAVQDYVIAQAHRLEEVEINPLICTPD-RAVAVDALITI 699


>gi|107100459|ref|ZP_01364377.1| hypothetical protein PaerPA_01001484 [Pseudomonas aeruginosa PACS2]
          Length = 695

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 19/232 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 474 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 523

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 524 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 580

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D   G VA      GG+ +E +     ++    + +    + S   A L           
Sbjct: 581 DPLFGPVALFG--LGGIFVEVLQDVVFRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRAD 638

Query: 184 RIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 639 VAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 690


>gi|15898607|ref|NP_343212.1| hypothetical protein SSO1806 [Sulfolobus solfataricus P2]
 gi|13815058|gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
          Length = 660

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 32/226 (14%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++   ++  P+ +                 L   
Sbjct: 465 FEALKLMEIYGIRTPKWGLANNENEAQNVADSIGYPVVM----------KISPDTPLHKT 514

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 515 ELKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEVFIGGLKD 560

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL--QGQA 183
              G V  I S  GG+ +E V K+    +  +  D    +  E  + + DML    +G  
Sbjct: 561 PVFGHVILIGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVE--SKIHDMLNARKRGYD 615

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                     + +   D ++  ++INPL + +NG    +D +I  +
Sbjct: 616 ESSIIRAITRVSRMIVDLNVKEMDINPLFVNENGAF-AVDVRIVLE 660


>gi|296875483|ref|ZP_06899556.1| phosphoribosylamine-glycine ligase [Streptococcus parasanguinis
           ATCC 15912]
 gi|296433550|gb|EFH19324.1| phosphoribosylamine-glycine ligase [Streptococcus parasanguinis
           ATCC 15912]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEGKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|298290381|ref|YP_003692320.1| CoA-binding protein [Starkeya novella DSM 506]
 gi|296926892|gb|ADH87701.1| CoA-binding domain protein [Starkeya novella DSM 506]
          Length = 731

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 28/233 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            KALL  + V V +    + V  A      L GP +VVK                 +D+ 
Sbjct: 34  GKALLADFGVRVPRSRFAADVVQAAEIAGELDGP-FVVKVV--------SPDILHKSDAG 84

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           G     +   +V + +  +    LI         +V+   VE+     RE+ +    D  
Sbjct: 85  GVALRLADADAVRAAVEAMAAKPLIAAA------KVDGWLVEEMMPSGREIVIGGYRDPQ 138

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            G    +    GG+ +E +     +       D    +   ++     +   +G+A ID 
Sbjct: 139 FG-PMIMVGL-GGIFVEVLRDISFRICPIEAKDAEEML--AELKGHALLDGARGEAGIDK 194

Query: 188 GDLFPNLYKAF--------CDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
             L   + +             D++ L++NP+I  +NG +  +D+++     A
Sbjct: 195 AALIDIMLRIGGAGGLLMRHQADIAELDLNPVIASQNGAV-AVDARVILTPQA 246


>gi|224372883|ref|YP_002607255.1| phosphoribosylamine--glycine ligase [Nautilia profundicola AmH]
 gi|223589025|gb|ACM92761.1| phosphoribosylamine--glycine ligase [Nautilia profundicola AmH]
          Length = 417

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 21/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+KYN+P AK +  S+  AA   I        VVK+     G+              
Sbjct: 103 KNFLKKYNIPTAKYIETSNKEAAYEFIDKCNKLPIVVKADGLCAGK-------------- 148

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S       + E+L      K  G  G     V VE+  D
Sbjct: 149 GVIIAESKDEAKKTVEEML----SGKAFGDAGK---KVIVEEFLD 186


>gi|254416184|ref|ZP_05029939.1| carbamoyl-phosphate synthase, large subunit [Microcoleus
           chthonoplastes PCC 7420]
 gi|196177117|gb|EDX72126.1| carbamoyl-phosphate synthase, large subunit [Microcoleus
           chthonoplastes PCC 7420]
          Length = 1072

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V    + S++  A++  + +     +++     GG G G       
Sbjct: 117 RQLFKEAMGRIGIGVCPSGIASNLDEAKALAQRIGTYPLIIRPAYTLGGTGGG------- 169

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +                 Q G   S V+ + VE      +E  L ++ 
Sbjct: 170 -------IAYNQEEYEEMA-----------QAGLDASPVSQILVEQSLLGWKEYELEVMR 211

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE +          + + P   +T ++   L D
Sbjct: 212 D-LADNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRD 255



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +LR+ ++      +  S   A +  K +  P+ V  S +  G
Sbjct: 676 KILRQLDIKQPPNGIARSYEEALNIAKRIGYPVVVRPSYVLGG 718


>gi|71897940|ref|ZP_00680145.1| Phosphoribosylglycinamide synthetase [Xylella fastidiosa Ann-1]
 gi|71732184|gb|EAO34239.1| Phosphoribosylglycinamide synthetase [Xylella fastidiosa Ann-1]
          Length = 430

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 28/190 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+  V ++V AA S ++    P+ V+K+   A G+             
Sbjct: 108 AKDFLARHGIPTARYAVHTNVDAAISDVRQQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + IR++L         G  G+RV    +E+  D     ++S++ D  
Sbjct: 154 -GVIVAMTVTEAEAAIRDML----SGNAFGHAGARV---VIEEYLDGEEASFISMV-DGA 204

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA--RI 185
             +   +A++Q    + +     P         P   +T E  A +   +     A    
Sbjct: 205 HALP--MATSQDHKRVSDGDIG-PNTGGMGAYSPAPIITDEIHARVMREIVNPTVAGMIA 261

Query: 186 DGGDLFPNLY 195
           DG      LY
Sbjct: 262 DGTPFMGFLY 271


>gi|34558426|ref|NP_908241.1| carbamoyl phosphate synthase large subunit [Wolinella succinogenes
           DSM 1740]
 gi|34484145|emb|CAE11141.1| CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN [Wolinella succinogenes]
          Length = 1089

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  ++K  + +       ++  A  A K +  PL +  S   AG             
Sbjct: 128 QAFKEAMQKIGMDLPLSRYAYNMEEAMIAAKEIGFPLIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++                 Q G   S ++ + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIEEFKQLA-----------QNGLEISPIHEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R    +           IE +          + I P + +T ++   + D 
Sbjct: 222 RADNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 265


>gi|325091289|gb|EGC44599.1| carbamoyl-phosphate synthase [Ajellomyces capsulatus H88]
          Length = 1215

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ V ++SV  A  A + +  P+ V  +    G               
Sbjct: 264 AKAL-NEINIPIAESVAVNSVDEALEAAEKIGYPIIVRSAYALGGL-------------- 308

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 309 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 354

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 355 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 407

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 408 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 456


>gi|212703677|ref|ZP_03311805.1| hypothetical protein DESPIG_01723 [Desulfovibrio piger ATCC 29098]
 gi|212672910|gb|EEB33393.1| hypothetical protein DESPIG_01723 [Desulfovibrio piger ATCC 29098]
          Length = 442

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP A   V +    A++A+  L  P  VVK+   A G+             
Sbjct: 116 AKDVMNRAGVPTAHSQVFTDPDKAKNAVVKLGAP-LVVKADGLAAGK------------- 161

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  + +I+         G  G+    + +E+        +L  L D  
Sbjct: 162 -GVVVAKTTQEALDAVDDIMCKR----AHGAAGA---KLVIEEFLVGEEASFLC-LCDGK 212

Query: 128 SGMVA 132
           + +  
Sbjct: 213 TAVPL 217


>gi|289620596|emb|CBI52957.1| unnamed protein product [Sordaria macrospora]
          Length = 1147

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+AK + +++V  A  A   +  P+ V  +    G               
Sbjct: 196 AKAL-EEINIPIAKSIAVNTVDEALDAANKIGYPIIVRAAYALGGL-------------- 240

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D  
Sbjct: 241 -GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVRDAN 286

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 287 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 339

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 340 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 388


>gi|219850226|ref|YP_002464659.1| phosphoribosylamine--glycine ligase [Chloroflexus aggregans DSM
           9485]
 gi|219544485|gb|ACL26223.1| phosphoribosylamine/glycine ligase [Chloroflexus aggregans DSM
           9485]
          Length = 414

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 27/125 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V +S   A    +   G  +VVK+   A G+             
Sbjct: 106 AKEIMAATGVPTAQSHVFASATEATEFARA-SGKAWVVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L   I  I ++         T P G     + +E+     RE+ +  L D T
Sbjct: 152 -GVIVAETLDETIEAIAKL--------STIPAGH---HLLLEERLY-GREVSVQALCDGT 198

Query: 128 SGMVA 132
                
Sbjct: 199 RLWPL 203


>gi|218677510|ref|ZP_03525407.1| succinyl-CoA synthetase subunit beta [Rhizobium etli CIAT 894]
          Length = 26

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/25 (76%), Positives = 21/25 (84%)

Query: 1  MNIHEYQAKALLRKYNVPVAKGVVI 25
          MNIHEYQAKALL+ Y  PVA+GV I
Sbjct: 1  MNIHEYQAKALLKGYGAPVAEGVAI 25


>gi|256829259|ref|YP_003157987.1| GCN5-like N-acetyltransferase [Desulfomicrobium baculatum DSM 4028]
 gi|256578435|gb|ACU89571.1| GCN5-related N-acetyltransferase [Desulfomicrobium baculatum DSM
           4028]
          Length = 896

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 30/234 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E +++ +L  Y VPV +  +  S   A  A   +  P+  +K         +     
Sbjct: 489 HLTEDESRQVLAAYGVPVVETRICKSAMQAVEAASEIGFPV-ALKI--------RSPQIT 539

Query: 62  LPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            P D  G     ++   V      +              G  V  +          EL++
Sbjct: 540 QPFDIGGIALDLTTPDLVFEAAANMSARVHAQVPNAYIEGFTVQKM---GRRPGAHELFI 596

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLEL 179
           S+  D+  G V       GG+    +          + + PL +G+  E ++       L
Sbjct: 597 SIFTDKVFGPVLRFG--HGGVSAPVINDHS------VTLPPLNMGLAKELISRTRIYKLL 648

Query: 180 QGQARIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
           QG  R    D+         + +   D   +  LE+NP+     G +  L ++I
Sbjct: 649 QGSRRQAAADIDDICLALIQISQMVIDLPQIVTLEMNPIFADDLG-VLALGARI 701


>gi|148642825|ref|YP_001273338.1| pyruvate carboxylase subunit A [Methanobrevibacter smithii ATCC
           35061]
 gi|148551842|gb|ABQ86970.1| pyruvate carboxylase (acetyl-CoA/biotin carboxylase), subunit A,
           PycA [Methanobrevibacter smithii ATCC 35061]
          Length = 497

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +KAL++K  VPV +G    +S +  A+   + +  P+ +VK+    GG G
Sbjct: 119 SKALMKKAGVPVIEGTPEGVSDIEEAKEIARQIGYPV-IVKASAGGGGIG 167


>gi|91772880|ref|YP_565572.1| carbamoyl phosphate synthase large subunit [Methanococcoides
           burtonii DSM 6242]
 gi|91711895|gb|ABE51822.1| Carbamoyl-phosphate synthase large chain [Methanococcoides burtonii
           DSM 6242]
          Length = 1075

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 65/217 (29%), Gaps = 47/217 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +         V + V +S++  AE+ I  L  PL +  +    G            
Sbjct: 129 RELFKNKMEDIGEKVPRSVAVSTLKEAEAIIDELGLPLIIRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  + + ++      L  +           R+N V +E+     +E    ++ 
Sbjct: 177 ---AGGGIAYTKEQLLEISERGLRRS-----------RINQVLIEESVLGWKEFEYEVM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQ 180
            R S     +      +D   +     + I         D    +       +   L ++
Sbjct: 222 -RDSNDTCIVICNMENLDP--MGVHTGESIVVTPSQTLNDIEHQMLRTAAIKIIRALGIE 278

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           G   I              D +  ++E+NP I   + 
Sbjct: 279 GGCNIQFAA---------KDGEYRIVEVNPRISRSSA 306


>gi|319790533|ref|YP_004152166.1| carbamoyl-phosphate synthase, large subunit [Thermovibrio
           ammonificans HB-1]
 gi|317115035|gb|ADU97525.1| carbamoyl-phosphate synthase, large subunit [Thermovibrio
           ammonificans HB-1]
          Length = 1073

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 37/163 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V K     ++  A   +K +  P  +  +    G            
Sbjct: 129 RELFKEAMLKIGLEVPKSGTAHTLEEALEVVKEVGLPAIIRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV    +++      ++ L ++            V+ + +E+     +E  L ++ 
Sbjct: 177 -EGGGV--AYNIEEFKEIAKKGLAAS-----------PVSEILIEESVLGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           D  +  V  I S      IE V          + + P   +T 
Sbjct: 223 D-LNDNVVIICS------IENVDPMGVHTGDSITVAPAQTLTD 258



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 69/209 (33%), Gaps = 50/209 (23%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  +      +  S+  AE   + +  P+ +  S +  G                
Sbjct: 675 RELLNRLGLKQPPSGIARSLEEAEKIAQEIGFPVLMRPSYVLGG---------------R 719

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            +R+  S++ +   + E   +  ++++          V ++   +   E  +  + D   
Sbjct: 720 AMRIVYSMEELRQYMAE---AVEVSEEKP--------VLIDKFLEDAVEFDVDAVADGEE 768

Query: 129 GMVAFIASTQGGM--DIEEVAKDYPQKIFKLLI-----DPLIGVTSEDVASLCDMLELQG 181
            ++       GG+   IEE           L       D +  +  E    +   L ++G
Sbjct: 769 VVI-------GGVMEHIEEAGIHSGDSACVLPTFSVSRDIVEKIK-EITRKIALELNVKG 820

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINP 210
              I           A  D ++ ++E+NP
Sbjct: 821 LINIQF---------AVKDGEIYIIEVNP 840


>gi|317122254|ref|YP_004102257.1| phosphoribosylamine--glycine ligase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592234|gb|ADU51530.1| phosphoribosylamine--glycine ligase [Thermaerobacter marianensis
           DSM 12885]
          Length = 425

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 26/170 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + +Y +P A G V     AAE  ++  P P +VVK+   A G+             
Sbjct: 108 AKAFMARYGIPTAPGRVFDDPAAAEDFLRRNPRP-WVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S   + ++ +  ++         G  G+    V VE+  +      LS+L    
Sbjct: 154 -GVFVCSDASAALAAVHRLMRQ-------GALGAAGRRVVVEERLEGRE---LSVLAVTD 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
              V  +   +    +E+  +  P         P+  VT + +  +   +
Sbjct: 203 GERVHLLPPARDYKRLEDGDRG-PNTGGMGAFSPVPDVTPQLLDEIRRRI 251


>gi|18033116|gb|AAL56990.1|AF329282_2 cyanophycin synthetase [Synechococcus sp. MA19]
          Length = 903

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    +PV KG VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILANAGIPVPKGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|312875882|ref|ZP_07735872.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797363|gb|EFR13702.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V +S+  A   I        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTSLEDAVRFINQTSQYPVVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTL-------ITKQTGPTGSRVNCVYVEDGADI 114
            GV + ++ +  +  +  I+           +  +    G  V+   V DG DI
Sbjct: 152 -GVIIANNQQEAVDALNLIMKEKFFGAAGNKVVIEDYLLGEEVSVFVVSDGKDI 204


>gi|284034552|ref|YP_003384483.1| phosphoribosylamine/glycine ligase [Kribbella flavida DSM 17836]
 gi|283813845|gb|ADB35684.1| phosphoribosylamine/glycine ligase [Kribbella flavida DSM 17836]
          Length = 425

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   +VP  +  + ++   A  AI     P YVVK    A G+             
Sbjct: 114 AKDVMAAASVPTGRAYICTTPEQAAEAIDAFG-PPYVVKDDALAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V +  +  ++   E                    V +E+  D
Sbjct: 160 -GVVVTADREEALAHAAE-----------------CEQVLIEEYLD 187


>gi|50285917|ref|XP_445387.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524691|emb|CAG58293.1| unnamed protein product [Candida glabrata]
          Length = 1113

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 68/221 (30%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++P+A+ +   ++    SA  T+  P+ +  +    G                G  
Sbjct: 156 LKEIDIPIAESIACENIDDVLSAASTIGYPVIIRSAYALGGL---------------GSG 200

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + +     + L             S    V VE      +E+   ++ DR +  +
Sbjct: 201 FANNPEELKELASQSL-------------SLAPQVLVEKSLRGWKEVEYEVVRDRENNCI 247

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            ++  P   ++ E+          +   L + G+  
Sbjct: 248 TV-------CNMENFDPLGVHTGDSIVFAPSQTLSDEEFHMLRSAAIKIIRHLGVVGECN 300

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +       +L Y+   + +  L   + L     G      +
Sbjct: 301 VQYALSPNSLDYRV-IEVNARLSRSSALASKATGYPLAYTA 340


>gi|294506967|ref|YP_003571025.1| carbamoyl-phosphate synthase large chain [Salinibacter ruber M8]
 gi|294343295|emb|CBH24073.1| Carbamoyl-phosphate synthase large chain [Salinibacter ruber M8]
          Length = 942

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 17/89 (19%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E + K  ++L+K ++P     V  SV  A      L  P  +  S +  G      
Sbjct: 667 MDLVEDRGKFTSILQKLDIPFPPYGVAHSVEEALETAGRLGYPTLIRPSYVLGGE----- 721

Query: 59  FKELPADSKGGVRVESSLKSVISDIREIL 87
                     G+R+  +   V   +  +L
Sbjct: 722 ----------GMRIAINEDEVAEYVGNVL 740


>gi|189219943|ref|YP_001940583.1| carbamoylphosphate synthase large subunit [Methylacidiphilum
           infernorum V4]
 gi|189186801|gb|ACD83986.1| Carbamoylphosphate synthase large subunit [Methylacidiphilum
           infernorum V4]
          Length = 1098

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 53/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +    K  + + +  +  ++  A      +     +++     GG+G         
Sbjct: 143 RQLFKEEMIKVGLDIPRSGIARNMEEAREVAAQINQFPLIIRPAFTLGGQGGS------- 195

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +   + +   LG +            +  + +E+G    +E  + ++ 
Sbjct: 196 -------IAYNREEFEAGVIRGLGVS-----------PIGEILIEEGLLGWKEFEMEVMR 237

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           DR    V           IE +          + + P   +T E+   + D
Sbjct: 238 DRKDSCVVI-------CSIENMDPMGVHTGDSITVAPAQTLTDEEYQRMRD 281


>gi|146304165|ref|YP_001191481.1| CoA-binding domain-containing protein [Metallosphaera sedula DSM
           5348]
 gi|145702415|gb|ABP95557.1| CoA-binding domain protein [Metallosphaera sedula DSM 5348]
          Length = 660

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+   L+  Y +   +  + +++  A+    ++  P+ +               + +   
Sbjct: 466 YEGLKLMELYGIRTPRWGIANTLEEAQRLADSIGYPVVM----------KISTDQPVHKT 515

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +      V           L++K +         V +++      E Y+  + D
Sbjct: 516 ELKGVYMNVERDMVKEKF------DLLSKIS-------KRVMIQEQLT-GLEAYVGGIRD 561

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G    I    GG+ +E +             + L  +    +  +    + +G    
Sbjct: 562 PVFGHTVLIGV--GGIYVEVLKSVSYGIAPVYEDEALEMLRESKLLDMIRARK-RGYDEG 618

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
                  N+ +   D ++  ++INPL++ + G    +D +++F
Sbjct: 619 SVIRTVSNISRLILDLNVKEMDINPLMVNEKGAF-AVDVRVTF 660


>gi|323097761|emb|CBJ18442.1| ATP citrate lyase [uncultured bacterium]
          Length = 111

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREKDAEG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGANV 364
           +G ++ I G I     + K   GI+ A      K   +++ + +R  G N 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEVYAEKMKAVDLKIYVRRGGPNY 111


>gi|159474088|ref|XP_001695161.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158276095|gb|EDP01869.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 432

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 102/306 (33%), Gaps = 56/306 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K + RKY++P A     +    A++ IK L  P+ VVK+   A G+              
Sbjct: 112 KDVCRKYDIPTAAYEKFTDPARAKAFIKQLGAPI-VVKASGLAAGK-------------- 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++     + ++L    + K  G  G   + + +E+  D   E+    LVD  +
Sbjct: 157 GVVVARTVEEAYQAVDDML----VRKVFGGAG---DELVIEEFLD-GEEVSFFALVDGEA 208

Query: 129 GMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +    A               GGM     A      I K        V  E +      
Sbjct: 209 AVPLVSAQDHKAVGDGDTGPNTGGMGAYSPAPAMNDTIHKQ-------VMDEIIYRTARG 261

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISFDDNALYR 235
           +  +G      G LF  L     D    LLE N        + L  L +    D      
Sbjct: 262 MAAEGAPFR--GTLFAGL--MIKDGKAKLLEHNVRFGDPECQGLMALCASDLTDAMLAAT 317

Query: 236 HLDIQELR-DVSEEDSREI--EAKQHNLSYIA------LDGNIGCMVNGAGLAMATMDII 286
              + ++R D   E +  +   A+ +   Y        L+G  G  V  AG A      +
Sbjct: 318 RGRLGDVRLDWRPEAALTVVLAARGYPGEYPKGSVIRGLEGVTGAKVFHAGTARNAAGEV 377

Query: 287 KLYGGA 292
              GG 
Sbjct: 378 VSAGGR 383


>gi|83816722|ref|YP_445092.1| carbamoyl-phosphate synthase, large subunit [Salinibacter ruber DSM
           13855]
 gi|83758116|gb|ABC46229.1| carbamoyl-phosphate synthase, large subunit [Salinibacter ruber DSM
           13855]
          Length = 942

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 17/89 (19%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E + K  ++L+K ++P     V  SV  A      L  P  +  S +  G      
Sbjct: 667 MDLVEDRGKFTSILQKLDIPFPPYGVAHSVEEALETAGRLGYPTLIRPSYVLGGE----- 721

Query: 59  FKELPADSKGGVRVESSLKSVISDIREIL 87
                     G+R+  +   V   +  +L
Sbjct: 722 ----------GMRIAINEDEVAEYVGNVL 740


>gi|222445056|ref|ZP_03607571.1| hypothetical protein METSMIALI_00673 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350375|ref|ZP_05975792.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Methanobrevibacter smithii DSM 2374]
 gi|222434621|gb|EEE41786.1| hypothetical protein METSMIALI_00673 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861158|gb|EFC93456.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Methanobrevibacter smithii DSM 2374]
          Length = 497

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +KAL++K  VPV +G    +S +  A+   + +  P+ +VK+    GG G
Sbjct: 119 SKALMKKAGVPVIEGTPEGVSDIEEAKEIARQIGYPV-IVKASAGGGGIG 167


>gi|116048945|ref|YP_792253.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115584166|gb|ABJ10181.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 715

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 21/233 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 544 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 600

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDMLELQGQ 182
           D   G VA      GG+ +E V +D   +     +D    +         L         
Sbjct: 601 DPLFGPVALFG--LGGIFVE-VLQDVVFRRCPFEVDEAEAMIRSIRGAPLLLGARGRPRA 657

Query: 183 ARIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                  L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 658 DVAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 710


>gi|254458724|ref|ZP_05072148.1| phosphoribosylamine--glycine ligase [Campylobacterales bacterium GD
           1]
 gi|207084490|gb|EDZ61778.1| phosphoribosylamine--glycine ligase [Campylobacterales bacterium GD
           1]
          Length = 421

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KYN+P A+ +   S+  A    +TL  P+ VVK+    GG+              
Sbjct: 105 KNFLAKYNIPTARYIETDSIEDAFKFTETLTAPI-VVKADGLCGGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S       I E+L      K  G  G     V VE+  D
Sbjct: 150 GVIIAQSHDEAKIAISEML----SGKSFGDAGL---KVIVEEFLD 187


>gi|163732512|ref|ZP_02139957.1| acyl-CoA synthetase, putative [Roseobacter litoralis Och 149]
 gi|161393872|gb|EDQ18196.1| acyl-CoA synthetase, putative [Roseobacter litoralis Och 149]
          Length = 695

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 70/217 (32%), Gaps = 34/217 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK  L ++ +PV +G+V+            L G    + + +     G     E 
Sbjct: 483 LSEAEAKQSLARFGIPVPRGLVVKRAD--------LGGMASALVAPLALKAIGLAHKSEA 534

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLS 121
                G +R+    +++    R++ G               +   VE+     + EL + 
Sbjct: 535 -----GALRLNVQAETLAMAARDMPG---------------DRFLVEEMVTGTVAELLIG 574

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQ 180
           +  D   G V  +A+  GG+  E         I    +D    +        L      +
Sbjct: 575 VTRDAAHGFVLTLAA--GGVLTELWGDQRSLLIPASRVDVADALAELRIYPMLRGYRGAK 632

Query: 181 GQARIDGGDLFPNL--YKAFCDKDMSLLEINPLIIMK 215
                   D    L  Y       +  +EINPL+   
Sbjct: 633 AACLPAVIDAVMGLQDYVINNAAHVQEVEINPLMCTP 669


>gi|332701485|ref|ZP_08421573.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332551634|gb|EGJ48678.1| CoA-binding domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 893

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 24/233 (10%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRF 59
            + E +A+ +L  Y VPV +    +S   A    + L  P+   V   Q+          
Sbjct: 490 KLSEAEARGVLAAYGVPVVETRTCASAREAVQIAEELGFPVALKVRSPQVP--------- 540

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILREL 118
              P    G +    + + +      ++        +    G  V  +          EL
Sbjct: 541 --QPFIVGGVMLDIETPEQLWEVAPSLVSRVHRHMPEAYIDGFVVQQM---GRRPGAHEL 595

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDM 176
           ++   +D   G V       GGM   +V +D    +  L +     + S       L   
Sbjct: 596 FVGAFIDPIFGPVVRFG--HGGMAF-KVIRDTAVALPPLNMSLARELISRTRIARLLSGA 652

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             L      D       + +   D   ++ LEINPL     G +  L ++I  
Sbjct: 653 GPLPAADVDDICLTLIQVTQLMIDVPQITDLEINPLFADDKG-VLALGAQIKV 704


>gi|319778482|ref|YP_004129395.1| D-alanine--D-alanine ligase [Taylorella equigenitalis MCE9]
 gi|317108506|gb|ADU91252.1| D-alanine--D-alanine ligase [Taylorella equigenitalis MCE9]
          Length = 312

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 73/223 (32%), Gaps = 42/223 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +     +P  +  V+      E A + +  P+ V   Q                 S 
Sbjct: 100 SKKIFIHEGIPTPEFRVVRDYEGLEKATQEIGYPIIVKPPQ---------------EGST 144

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL---V 124
            G++   S   +     E +                  + VE   +  REL ++++    
Sbjct: 145 IGLKKVHSQDELTEAFNESIKFD-------------EEMLVEKCIE-GRELTVAIIGKSP 190

Query: 125 DRTSGMVAFIASTQGGMDIEE-VAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLELQGQ 182
           D  +  +  I +  G  D E+   +D  Q I    +D  +    E       D LE QG 
Sbjct: 191 DTRALPIIEIVTPDGNYDYEQKYTRDDTQYICPAKLDENLARNIENICIKAYDSLECQGW 250

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           +R+D             +    +LEIN    M +  L  + +K
Sbjct: 251 SRVDVM--------LDKNNCPWVLEINTSPGMTSHSLVPMAAK 285


>gi|313105961|ref|ZP_07792223.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 39016]
 gi|310878725|gb|EFQ37319.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa 39016]
          Length = 715

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 21/233 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 544 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 600

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDMLELQGQ 182
           D   G VA      GG+ +E V +D   +     +D    +         L         
Sbjct: 601 DPLFGPVALFG--LGGIFVE-VLQDVVFRRCPFEVDEAEAMIRSIRGAPLLLGARGRPRA 657

Query: 183 ARIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                  L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 658 DVAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 710


>gi|302831065|ref|XP_002947098.1| hypothetical protein VOLCADRAFT_79479 [Volvox carteri f.
           nagariensis]
 gi|300267505|gb|EFJ51688.1| hypothetical protein VOLCADRAFT_79479 [Volvox carteri f.
           nagariensis]
          Length = 472

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 35/164 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K + RKY++P A     +    A+S IK L  P+ VVK+   A G+              
Sbjct: 139 KDICRKYDIPTAAYEKFTDPARAKSFIKHLGAPI-VVKASGLAAGK-------------- 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++     + ++L    + K  G  G   + + +E+  D   E+    LVD  +
Sbjct: 184 GVVVARTVEEAYQAVDDML----VHKVFGGAG---DELVIEEFLD-GEEVSFFALVDGEA 235

Query: 129 GMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLID 160
            +    A               GGM     A    + IFK ++D
Sbjct: 236 AIPLVSAQDHKAVGDGDTGPNTGGMGAYSPAPVMNEAIFKQVMD 279


>gi|149010916|ref|ZP_01832221.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP19-BS75]
 gi|147764552|gb|EDK71482.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP19-BS75]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 95/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  ++ K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDGKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|148547261|ref|YP_001267363.1| CoA-binding domain-containing protein [Pseudomonas putida F1]
 gi|148511319|gb|ABQ78179.1| CoA-binding domain protein [Pseudomonas putida F1]
          Length = 705

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           + E+Q+K  LR + +PV  G V+S+   A +    +  P  V+K+
Sbjct: 484 LDEWQSKQALRAFGLPVPAG-VLSTPERAVADAARVGYP-LVLKA 526


>gi|322517641|ref|ZP_08070506.1| phosphoribosylamine-glycine ligase [Streptococcus vestibularis ATCC
           49124]
 gi|322123718|gb|EFX95303.1| phosphoribosylamine-glycine ligase [Streptococcus vestibularis ATCC
           49124]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +     +L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHGML----LDNKFGDSGARV---VIEEFLD 190


>gi|198432073|ref|XP_002131318.1| PREDICTED: similar to propionyl-Coenzyme A carboxylase, alpha
           polypeptide isoform 2 [Ciona intestinalis]
          Length = 685

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 71/214 (33%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K + ++  V    G   V+ +V  A    + +  P+ +  S                  
Sbjct: 159 SKLIAKEAGVNTIPGYDGVVENVEDAVKIAEEIGYPVMIKAS---------------AGG 203

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + K          G    +++   +    + + +E   D  R + + +L D
Sbjct: 204 GGKGMRIAWNEKETRE------GFRFSSQEAAASFGD-DRLLIEKFIDTPRHIEMQVLAD 256

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                +      +    I+   +   ++   + +DP       +   +L + ++ +    
Sbjct: 257 GYGNTLWL---NERECSIQRRNQKVVEEAPSIYLDPTTREAMGKQAVALAEAVQYKSAGT 313

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           ++   D   N Y  F + +  L   +P+     G
Sbjct: 314 VEFLVDSKKNFY--FLEMNTRLQVEHPVTEYITG 345


>gi|168493754|ref|ZP_02717897.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC3059-06]
 gi|221231000|ref|YP_002510152.1| phosphoribosylamine-glycine ligase [Streptococcus pneumoniae ATCC
           700669]
 gi|225853687|ref|YP_002735199.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae JJA]
 gi|183576058|gb|EDT96586.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           CDC3059-06]
 gi|220673460|emb|CAR67928.1| phosphoribosylamine-glycine ligase [Streptococcus pneumoniae ATCC
           700669]
 gi|225723205|gb|ACO19058.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae JJA]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|21241282|ref|NP_640864.1| phosphoribosylamine--glycine ligase [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|25091072|sp|Q8PQ21|PUR2_XANAC RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|21106601|gb|AAM35400.1| phosphoribosylamine-glycine ligase [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 431

 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGTPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++  + 
Sbjct: 154 -GVIVALTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGKH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|312793621|ref|YP_004026544.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180761|gb|ADQ40931.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V +S+  A   I        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTSLEDAVRFINQTSQYPVVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTL-------ITKQTGPTGSRVNCVYVEDGADI 114
            GV + ++ +  +  +  I+           +  +    G  V+   V DG DI
Sbjct: 152 -GVIIANNQQEAVDALNLIMKEKFFGAAGNKVVIEDYLLGEEVSVFVVSDGKDI 204


>gi|301058121|ref|ZP_07199173.1| phosphoribosylamine--glycine ligase [delta proteobacterium NaphS2]
 gi|300447753|gb|EFK11466.1| phosphoribosylamine--glycine ligase [delta proteobacterium NaphS2]
          Length = 429

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    +   AA++ I  L  P  VVK+   A G+              
Sbjct: 109 KDFLARHNIPTARYRSFTDFDAAKAFINELSAP-LVVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV + +S    I     +L      K  G  G    C+ VE+   I  E    ++VD   
Sbjct: 154 GVIIATSKAEAIDAAEGML----SGKSFGQAGK---CIIVEECL-IGEEASFIVMVDGLH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 ILPL 209


>gi|240275452|gb|EER38966.1| carbamoyl-phosphate synthase [Ajellomyces capsulatus H143]
          Length = 1182

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ V ++SV  A  A + +  P+ V  +    G               
Sbjct: 231 AKAL-NEINIPIAESVAVNSVDEALEAAEKIGYPIIVRSAYALGGL-------------- 275

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 276 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 321

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 322 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 374

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 375 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 423


>gi|291287677|ref|YP_003504493.1| phosphoribosylamine/glycine ligase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884837|gb|ADD68537.1| phosphoribosylamine/glycine ligase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 428

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    +P A     + + AA++ ++    P+ VVK+   A G+             
Sbjct: 108 AKEIMIDAGIPTAAYGEFTDLAAAKAYVEKHGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ + EI     +    G  G   + V +E+  D     YL+   D  
Sbjct: 154 -GVTVAKTSEEAIAALEEI----FVDNAFGEAG---SKVVIEEFLDGEEASYLAFT-DGI 204

Query: 128 SGMVAF 133
           + +   
Sbjct: 205 TVLPMV 210


>gi|77408751|ref|ZP_00785482.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae COH1]
 gi|77172659|gb|EAO75797.1| phosphoribosylamine--glycine ligase [Streptococcus agalactiae COH1]
          Length = 420

 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTYSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|171184739|ref|YP_001793658.1| lysine biosynthesis enzyme LysX [Thermoproteus neutrophilus V24Sta]
 gi|170933951|gb|ACB39212.1| lysine biosynthesis enzyme LysX [Thermoproteus neutrophilus V24Sta]
          Length = 283

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 30/149 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+Y VP  +  +   + AA +A + L  P+ +VK    + GR               V+
Sbjct: 98  LREYGVPTPRTYLAFGLEAARAAAEKLSYPV-IVKPTDGSWGRYVSM-----------VK 145

Query: 72  VESSLKSVISDIREI---LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
               L++V+   + +   L   L+ +     G  +                ++++ DR  
Sbjct: 146 SAEDLETVVMHRQAMESDLHIYLVQEYVEKPGRDIR---------------VTVVGDRAV 190

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
             +  IAS     +     +  P KI   
Sbjct: 191 AAIYRIASADWRTNTARGGRAEPVKIDPE 219


>gi|302866818|ref|YP_003835455.1| carbamoyl-phosphate synthase large subunit [Micromonospora
           aurantiaca ATCC 27029]
 gi|302569677|gb|ADL45879.1| carbamoyl-phosphate synthase, large subunit [Micromonospora
           aurantiaca ATCC 27029]
          Length = 1115

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 52/176 (29%), Gaps = 42/176 (23%)

Query: 9   KALLRKYNVP---------VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           K ++ K  V          V +  V  S+      +  L  P+ +         R     
Sbjct: 133 KEIVAKAGVRLGLDDPSALVPRSRVCHSMDEVRETVAELGLPVVI---------RPSFTM 183

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +       +  + + +       L ++            V+ V +E+     +E  
Sbjct: 184 GGLGSG------MAHTDEDLERIAGSGLAAS-----------PVHEVLIEESVLGWKEYE 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           L L+ DR   +V           IE V          + + P + +T  +   L D
Sbjct: 227 LELMRDRHDNVVVV-------CSIENVDPMGVHTGDSVTVAPSMTLTDREYQRLRD 275



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 23/68 (33%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L +  +      + +S   A++    +  P+ V  S +  G   +  + +       G
Sbjct: 697 AVLARAGLRAPAHGMATSYDEAKAIADEIGYPVLVRPSYVLGGRGMEIVYDDATLRDYIG 756

Query: 70  VRVESSLK 77
                S  
Sbjct: 757 RATAISPD 764


>gi|326318671|ref|YP_004236343.1| cyanophycin synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375507|gb|ADX47776.1| cyanophycin synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 723

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G V+++   A    + +  P+ V
Sbjct: 225 KRLLATCGVPVPEGRVVANAQEAWDVAQDIGFPVTV 260


>gi|297583020|ref|YP_003698800.1| phosphoribosylamine/glycine ligase [Bacillus selenitireducens
           MLS10]
 gi|297141477|gb|ADH98234.1| phosphoribosylamine/glycine ligase [Bacillus selenitireducens
           MLS10]
          Length = 422

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++KYN+P A     ++  AA S I+    P+ VVK+   A G+             
Sbjct: 108 AKGIMQKYNIPTAAYATFTNPDAAMSYIREQGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  +  +    +   + G  G   + V +E+  +   EL     V  T
Sbjct: 154 -GVVVAKTEEEAIEAVTAM----MQDHRFGEAG---SRVVIEECLE-GEELSFMAFVHGT 204

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 205 AVVPMVTA 212


>gi|154483499|ref|ZP_02025947.1| hypothetical protein EUBVEN_01203 [Eubacterium ventriosum ATCC
           27560]
 gi|149735751|gb|EDM51637.1| hypothetical protein EUBVEN_01203 [Eubacterium ventriosum ATCC
           27560]
          Length = 423

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A      S   A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYENFDSPEEAMKYLETSKYPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +  +  ++E+    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTKEEAMDGVKEL----MLDKKFGNAG---NTIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKIMTSAQD 212


>gi|296390624|ref|ZP_06880099.1| pimeloyl-CoA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 687

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 83/232 (35%), Gaps = 19/232 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL +  +  A   V+ S   A +  + +  P+ V+K                  
Sbjct: 466 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPV-VLK---------LASADIQHK 515

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S    +    ++L   L         +R++ V V        E ++ +  
Sbjct: 516 SEIGGVLLGVSDADAVRAGFQLL---LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQR 572

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQA 183
           D   G VA      GG+ +E +     ++    + +  + + S      L          
Sbjct: 573 DPLFGPVALFG--LGGIFVEVLQDVVFRRCPFEVDEAEVMIRSIRGAPLLLGARGRPRAD 630

Query: 184 RIDGGDLFPNLYKAFCD--KDMSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 L  NL +   +  + +  +++NP+I +  G+    +D+ +  ++ A
Sbjct: 631 VAALARLLSNLSRFAWEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 682


>gi|225561845|gb|EEH10125.1| carbamoyl-phosphate synthase [Ajellomyces capsulatus G186AR]
          Length = 1182

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ V ++SV  A  A + +  P+ V  +    G               
Sbjct: 231 AKAL-NEINIPIAESVAVNSVDEALEAAEKIGYPIIVRSAYALGGL-------------- 275

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 276 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 321

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 322 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 374

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 375 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 423


>gi|320040249|gb|EFW22182.1| carbamoyl-phosphate synthase [Coccidioides posadasii str. Silveira]
          Length = 1174

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + ++P+A+ + +S+V  A  A   +  P+ V  +    G               
Sbjct: 222 AKAL-NEIDIPIAESIAVSTVDEALEAADKIGYPIIVRSAYALGGL-------------- 266

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 267 -GSGFAANAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 312

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 313 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 365

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 366 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 414


>gi|303321562|ref|XP_003070775.1| carbamoyl-phosphate synthase arginine-specific large chain,
           putative [Coccidioides posadasii C735 delta SOWgp]
 gi|240110472|gb|EER28630.1| carbamoyl-phosphate synthase arginine-specific large chain,
           putative [Coccidioides posadasii C735 delta SOWgp]
          Length = 1174

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + ++P+A+ + +S+V  A  A   +  P+ V  +    G               
Sbjct: 222 AKAL-NEIDIPIAESIAVSTVDEALEAADKIGYPIIVRSAYALGGL-------------- 266

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 267 -GSGFAANAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 312

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 313 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 365

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 366 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 414


>gi|172037152|ref|YP_001803653.1| cyanophycin synthetase [Cyanothece sp. ATCC 51142]
 gi|20138007|sp|Q9KGY4|CPHA_CYAA5 RecName: Full=Cyanophycin synthetase; AltName: Full=Cyanophycin
           synthase
 gi|9739167|gb|AAF97933.1|AF279247_1 cyanophycin synthetase [Cyanothece sp. ATCC 51142]
 gi|171698606|gb|ACB51587.1| cyanophycin synthetase [Cyanothece sp. ATCC 51142]
          Length = 872

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 40/122 (32%), Gaps = 13/122 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   VPV +G  I      ESAI  + G   V+K      GRG         +++ 
Sbjct: 224 KTILQDAGVPVPRGTTIQFFEELESAIDDVGGYPIVIKPLDGNHGRGITIDINSWKEAEE 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-------------NCVYVEDGADIL 115
              + S      + I E        +     G  V             +   +E+  DI 
Sbjct: 284 AYDLASEESKTRTVIVERFYKGSDHRLLVINGKLVAVAERVPAHVIGDDKHTIEELIDIT 343

Query: 116 RE 117
            E
Sbjct: 344 NE 345


>gi|89075592|ref|ZP_01161993.1| putative acetyltransferase [Photobacterium sp. SKA34]
 gi|89048599|gb|EAR54172.1| putative acetyltransferase [Photobacterium sp. SKA34]
          Length = 441

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 89/252 (35%), Gaps = 35/252 (13%)

Query: 2   NIH--E-YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           NIH  E ++A+ +L  Y        +      A    + +  P+ V         + +  
Sbjct: 24  NIHHLETHEARPILECYGFNTLPTWIALDAVEAVHIAEQIGYPVAV---------KLRSP 74

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LR 116
                +D  G V    +   V +  + I     +   T     R+N + V+  AD    +
Sbjct: 75  DIRHKSDIHGVVLHLRTAAEVETAAQAIFDRAAMLYPTA----RINGLLVQRMADRSGAQ 130

Query: 117 ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCD 175
           EL + +  D   G V  +       DI   A         + I PL + +    V     
Sbjct: 131 ELRIDVHNDPIFGPVILMGEDNAHWDIHRDAA--------VGIPPLNMALARYMVIDALK 182

Query: 176 MLELQGQARIDGGD------LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             +++ ++ ++  D      L   + +   +  ++  L I+PL+I  +  L VLD+ +  
Sbjct: 183 TGKIKQRSALEKIDVPALCNLLVKISQLIINCPEIKALNIHPLLISGS-DLTVLDASMDI 241

Query: 229 DDNALYRHLDIQ 240
              +  +   + 
Sbjct: 242 QSFSGDKQKRLA 253


>gi|229917955|ref|YP_002886601.1| phosphoribosylamine/glycine ligase [Exiguobacterium sp. AT1b]
 gi|229469384|gb|ACQ71156.1| phosphoribosylamine/glycine ligase [Exiguobacterium sp. AT1b]
          Length = 417

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  +P A     +   +A + I+ L  P  VVK+   A G+             
Sbjct: 103 AKEVMMEAGIPTAAYEAFTDAASALAYIEKLGAP-LVVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + +R+I  +    +Q        + V +E+  D   E  L   V   
Sbjct: 149 -GVTVAFTVEEAEAAVRDIFTTDKFGQQ--------SQVVIEEFLD-GEEFSLMAFVSGE 198

Query: 128 SGMVAF 133
             +   
Sbjct: 199 RVIPMI 204


>gi|295091351|emb|CBK77458.1| phosphoribosylamine--glycine ligase [Clostridium cf.
           saccharolyticum K10]
          Length = 424

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A      +   A  A         V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYENFDNADEA-LAYLETASMPIVLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ I    ++ K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVKSI----MLDKKFGSAG---NQMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKIMTSAQD 212


>gi|121611887|ref|YP_999694.1| cyanophycin synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121556527|gb|ABM60676.1| cyanophycin synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 741

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    +P+ +G ++ S   A  A + +  P+ V+K      GRG         D + 
Sbjct: 225 KGLLASCGLPIPEGRLVHSPEQAWQAAQDIGLPV-VLKPSDGNHGRGVTLDLHSRQDIEA 283

Query: 69  GVRVES 74
             R+  
Sbjct: 284 AYRLAE 289


>gi|258652655|ref|YP_003201811.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM
           44233]
 gi|258555880|gb|ACV78822.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM
           44233]
          Length = 926

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 72/221 (32%), Gaps = 27/221 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +P       + V  A  A   L  P+ V           K     L     GG
Sbjct: 715 RLLAAYGLPTCPQRPATGVAQALIAAGELGYPVVV-----------KLADPGLHKTDVGG 763

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           VR+    +  +                  TG R   + ++       E  +  +     G
Sbjct: 764 VRLGLVDERALRAA-----------VADLTGGRPRALLLQPMVPPGLEFIVGAVQHDHFG 812

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGG 188
            V  + +  GG+  + VA    +       D    +    +A + D        +R    
Sbjct: 813 AVLMVGA--GGVFTDLVADRAFRLAPVGPGDAAAMLDELRMAPMLDGYRGAPAVSRERLA 870

Query: 189 DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           DL   +     D  +++ L++NP +I +   L ++D++I  
Sbjct: 871 DLLIRVGSVVEDLGEVAELDLNP-VIGRGTELMIVDARIRV 910


>gi|291086899|ref|ZP_06344820.2| phosphoribosylamine--glycine ligase [Clostridium sp. M62/1]
 gi|291077339|gb|EFE14703.1| phosphoribosylamine--glycine ligase [Clostridium sp. M62/1]
          Length = 429

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A      +   A  A         V+K+   A G+             
Sbjct: 111 SKDLMKKYGIPTAAYENFDNADEA-LAYLETASMPIVLKADGLALGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ I    ++ K+ G  G   N + VE+         +S+L    
Sbjct: 157 -GVLICNTLEEAKEGVKSI----MLDKKFGSAG---NQMVVEEFMTGRE---VSVLSFVD 205

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 206 GNTIKIMTSAQD 217


>gi|119195703|ref|XP_001248455.1| carbamoyl-phosphate synthase, arginine-specific, large chain
           [Coccidioides immitis RS]
          Length = 1174

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + ++P+A+ + +S+V  A  A   +  P+ V  +    G               
Sbjct: 222 AKAL-NEIDIPIAESIAVSTVDEALEAADKIGYPIIVRSAYALGGL-------------- 266

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 267 -GSGFAANAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 312

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 313 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 365

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 366 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 414


>gi|33240870|ref|NP_875812.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33238399|gb|AAQ00465.1| Phosphoribosylamine-glycine ligase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 445

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 23/113 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  +P A+    ++   A   +  +  P  VVK+   A G+             
Sbjct: 123 AKDLMAEAGIPTARYWAANNKPEALDVLAKINQP-LVVKADGLASGK------------- 168

Query: 68  GGVRVESSLKSVISDIREIL-------GSTLITKQTGPTGSRVNCVYVEDGAD 113
            GVRV  S++     I E         G+TL+ ++    G  V+   + DG +
Sbjct: 169 -GVRVCQSIQETREAIEEAFAGKFGEAGTTLVLEECL-EGPEVSVFAISDGEN 219


>gi|330831628|ref|YP_004394580.1| acyl-CoA synthetase [Aeromonas veronii B565]
 gi|328806764|gb|AEB51963.1| Acyl-CoA synthetase [Aeromonas veronii B565]
          Length = 860

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 33/240 (13%)

Query: 175 DMLELQGQARIDGGDLFPNLYK--------AFCDK--DMSLLEINPLIIMKNGRLRVL-- 222
             + L     ID G L   L +         + DK  D            +N  + VL  
Sbjct: 178 AFISLGDHCDIDFGQLLDQLSRDSVTRAILIYMDKLHDARHFLSAARAASRNKPILVLKS 237

Query: 223 ---DSKISFDD--NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGA 276
              +     D+  +A  R   +  +RD + E    +E   H+++   L G  +  + NG 
Sbjct: 238 GRHEPAHGLDNVYDAAIRRAGMLRVRD-THELFAAVETLSHSMT---LKGERLAIISNGR 293

Query: 277 GLAMATMDIIKLYGGAPAN-FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
           GLA   +D++   GG  A   LD+G  A       A   +  +  +  ILI     +   
Sbjct: 294 GLANMAVDVLLERGGKLARPPLDIGSDATITTYQEALDSVLQEDGIDAILIIHAPSLTAP 353

Query: 336 DV-LVKGILSAVKEVKINIPLVMRLEGAN------VDIGNRLIAESGLNVITAIDLDDAA 388
              L   +++ +K+        +     N         G +L  E+G       +   AA
Sbjct: 354 SAPLASHLIAHLKQHPRARRFNIL---TNWAGEYSAQEGRKLFTEAGFPTYRTPESAMAA 410


>gi|198432075|ref|XP_002131306.1| PREDICTED: similar to propionyl-Coenzyme A carboxylase, alpha
           polypeptide isoform 1 [Ciona intestinalis]
          Length = 708

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 71/214 (33%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K + ++  V    G   V+ +V  A    + +  P+ +  S                  
Sbjct: 159 SKLIAKEAGVNTIPGYDGVVENVEDAVKIAEEIGYPVMIKAS---------------AGG 203

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + K          G    +++   +    + + +E   D  R + + +L D
Sbjct: 204 GGKGMRIAWNEKETRE------GFRFSSQEAAASFGD-DRLLIEKFIDTPRHIEMQVLAD 256

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                +      +    I+   +   ++   + +DP       +   +L + ++ +    
Sbjct: 257 GYGNTLWL---NERECSIQRRNQKVVEEAPSIYLDPTTREAMGKQAVALAEAVQYKSAGT 313

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           ++   D   N Y  F + +  L   +P+     G
Sbjct: 314 VEFLVDSKKNFY--FLEMNTRLQVEHPVTEYITG 345


>gi|85860899|ref|YP_463101.1| carbamoyl phosphate synthase large subunit [Syntrophus
           aciditrophicus SB]
 gi|85723990|gb|ABC78933.1| carbamoyl-phosphate synthase large chain [Syntrophus aciditrophicus
           SB]
          Length = 1069

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 37/165 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R+      + V +     ++    +  + +  P+ V  S    G            
Sbjct: 129 RELFRRAMESIGLRVPRSGFARTMEEVLTIAEEIGFPVIVRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  V  + + ++   R  L +++           ++ + +E+ A   +E  L ++ 
Sbjct: 177 ---TGSGVAYNREELVEQARAGLEASM-----------IHEIMLEESALGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
           DR +  V  I S      IE +          + + P   +T  +
Sbjct: 223 DR-ADNVVIICS------IENLDPMGVHTGESITVAPAQTLTDAE 260


>gi|116750185|ref|YP_846872.1| phosphoribosylamine--glycine ligase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699249|gb|ABK18437.1| phosphoribosylamine--glycine ligase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 431

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 33/132 (25%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  +PV +  V +  + A   ++    P+ VVK+   A G+              
Sbjct: 105 KVLLEQLGIPVPEFAVFADANEARGHVRKTGYPV-VVKADGLAAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY---LSLLV- 124
           G  V  +++     IR I+   +     G  G+RV         DI R LY   LS    
Sbjct: 150 GALVCDTVEDAEEAIRLIMEERIF----GDAGARV---------DIERRLYGRELSFFCF 196

Query: 125 -DRTSGMVAFIA 135
            D  + +    A
Sbjct: 197 TDGYTLLPMVAA 208


>gi|294627262|ref|ZP_06705849.1| phosphoribosylamine--glycine ligase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665535|ref|ZP_06730817.1| phosphoribosylamine--glycine ligase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598501|gb|EFF42651.1| phosphoribosylamine--glycine ligase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604685|gb|EFF48054.1| phosphoribosylamine--glycine ligase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 431

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|289763465|ref|ZP_06522843.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis GM 1503]
 gi|289710971|gb|EFD74987.1| phosphoribosylaminoimidazole carboxylase ATPase subunit purK
           [Mycobacterium tuberculosis GM 1503]
          Length = 322

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 27/107 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    V V +   I      +     +  P+ VVK+ +  G  G+            GVR
Sbjct: 138 LAAAGVAVPRYAGIKDPDEIDVFAARVDAPI-VVKA-VRGGYDGR------------GVR 183

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           +   +       RE L   +              V VE+  D+ REL
Sbjct: 184 MARDVADARDFARECLADGV-------------AVLVEERVDLRREL 217


>gi|220933141|ref|YP_002510049.1| phosphoribosylamine--glycine ligase [Halothermothrix orenii H 168]
 gi|219994451|gb|ACL71054.1| phosphoribosylamine--glycine ligase [Halothermothrix orenii H 168]
          Length = 425

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++L+KYN+P A+  V ++   A + +K    P  V+K++  A G+             
Sbjct: 106 AKSILKKYNIPTAEFEVFTTFEEALAYLKQAEYP-LVIKAEGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + +  +     + +I+   +     G  G     + VED  +   E+ +  L D  
Sbjct: 152 -GVFIATDKEKACQAVEKIMEKRIF----GDAGQ---RIVVEDFLE-GEEVSVLALTDGK 202

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 203 TIIPMVPA 210


>gi|325105839|ref|YP_004275493.1| carbamoyl-phosphate synthase, large subunit [Pedobacter saltans DSM
           12145]
 gi|324974687|gb|ADY53671.1| carbamoyl-phosphate synthase, large subunit [Pedobacter saltans DSM
           12145]
          Length = 937

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 28/119 (23%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M+I E + +   LLR  N+P  +  V  S   A      +  P+ V  S +  G      
Sbjct: 665 MDIAEDRGRFSDLLRDLNIPYPRYGVAESAEEALKVANEVGYPVLVRPSYVLGG------ 718

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
                     G+ +  + + +   + ++LG               N V ++   D   E
Sbjct: 719 ---------QGMSIVINDEDLEKAVVKLLG-----------DLPGNRVLIDHFLDRAEE 757


>gi|294672957|ref|YP_003573573.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella
           ruminicola 23]
 gi|294473544|gb|ADE82933.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella
           ruminicola 23]
          Length = 401

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 37/193 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L     +  AK     +    ++A   +  P  VVK  + + G G+           
Sbjct: 111 SKEL----GLRTAKYFYAKTFDEFKAAADEIGFPC-VVKPLMSSSGHGQSY--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                  +   +    +E           G  G  V  V +E+  D   E  L L V + 
Sbjct: 157 -----VHNDDELEQAFKE--------AMEGSRGD-VKEVIIEEFIDFDSEFTL-LTVTQK 201

Query: 128 SGMVAF----IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL--CDMLELQG 181
           +G        I   Q   D  E  +  P KI    +     +  +   +L    +  ++ 
Sbjct: 202 NGRPTLFCPPIGHVQKAGDYRESWQ--PYKISDEALKQAQIMADKVTKALTGAGIWGVEF 259

Query: 182 QARIDGGDLFPNL 194
                G  +F  L
Sbjct: 260 FLTKQGEVIFSEL 272


>gi|291544804|emb|CBL17913.1| phosphoribosylamine--glycine ligase [Ruminococcus sp. 18P13]
          Length = 426

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+++Y +P A   V +    A + IK       V+K+   A G+             
Sbjct: 106 SKQLMKQYGIPTAGYEVFTQPDQAIAYIKAKNTYPTVIKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +        + +R ++   +     G +G+    + VE+         L    D  
Sbjct: 153 -GVVLAQDFAEAEAAVRSMMEDKIF----GESGA---QIVVEEFLTGPEVSVLCFT-DGK 203

Query: 128 SGMVAF 133
           +     
Sbjct: 204 TVRPMI 209


>gi|311695241|gb|ADP98114.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [marine
           bacterium HP15]
          Length = 372

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 61/211 (28%), Gaps = 56/211 (26%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +  +P  +  +  S  + ++A + L  P+ V KS                     
Sbjct: 99  KTLFGELGIPTPEWKIADSAASLKAAAEELGCPV-VAKS-------------NTEGYDGK 144

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  S +   +    I             G     + VE   D  RE  +S++  R  
Sbjct: 145 GQAVLKSPEDAEAAWTSI-------------GHP--RLIVEKFVDFHRE--VSIIAVR-- 185

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                  +  G +    +A++              G+      S+    +L+   + D  
Sbjct: 186 -------AEDGELAFYPMAENTHH----------EGILRY---SIAPAPKLEKHVQEDAE 225

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
                L     + D   +    L    +G +
Sbjct: 226 RYIKALLN---ELDYVGVLTLELFETTDGLV 253


>gi|258575591|ref|XP_002541977.1| carbamoyl-phosphate synthase, large subunit [Uncinocarpus reesii
           1704]
 gi|237902243|gb|EEP76644.1| carbamoyl-phosphate synthase, large subunit [Uncinocarpus reesii
           1704]
          Length = 1174

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ + +S+V  A  A   +  P+ V  +    G               
Sbjct: 222 AKAL-NEINIPIAESIAVSTVDEALDAADKIGYPIIVRSAYALGGL-------------- 266

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D +
Sbjct: 267 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAS 312

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 313 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 365

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 366 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 414


>gi|302525869|ref|ZP_07278211.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. AA4]
 gi|302434764|gb|EFL06580.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. AA4]
          Length = 1106

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 33/161 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++RK    V +  V  ++      +  L  P+ +         R       L +    
Sbjct: 134 KDIVRKIGADVPRSRVCHNMDEVRETVAELGLPVVI---------RPSFTMGGLGSG--- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +                TG T S V  V +E+     +E  L L+ D+  
Sbjct: 182 ---MAHTPEDLERLAS-----------TGLTESPVTEVLIEESVLGWKEYELELMRDKHD 227

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
            +V           IE V          + + P + +T  +
Sbjct: 228 NVVVV-------CSIENVDAMGVHTGDSVTVAPTMTLTDRE 261



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    +S   A+     +  P+ V  S +  GGRG
Sbjct: 687 EVLSEAGLPAPKYGTATSFEGAKRIADEIGYPVLVRPSYVL-GGRG 731


>gi|158431213|pdb|2YRW|A Chain A, Crystal Structure Of Gar Synthetase From Geobacillus
           Kaustophilus
 gi|158431214|pdb|2YRX|A Chain A, Crystal Structure Of Gar Synthetase From Geobacillus
           Kaustophilus
 gi|158431219|pdb|2YS6|A Chain A, Crystal Structure Of Gar Synthetase From Geobacillus
           Kaustophilus
 gi|158431220|pdb|2YS7|A Chain A, Crystal Structure Of Gar Synthetase From Geobacillus
           Kaustophilus
          Length = 451

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----KGRFKELP 63
           AK L++KY +P A     +S   A++ I+    P+ V+K+   A G+G    +   + L 
Sbjct: 127 AKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAPI-VIKADGLAAGKGVTVAQTVEEALA 185

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           A     V  +         I E L     +      G +V  + +    D  R  
Sbjct: 186 AAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQ--DHKRAY 238


>gi|94987660|ref|YP_595761.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS9429]
 gi|94991527|ref|YP_599626.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS2096]
 gi|94541168|gb|ABF31217.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS9429]
 gi|94545035|gb|ABF35082.1| Phosphoribosylamine--glycine ligase [Streptococcus pyogenes
           MGAS2096]
          Length = 470

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 156 AKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPI-VVKADGLAVGK------------- 201

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 202 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 239


>gi|54297594|ref|YP_123963.1| phosphoribosylamine-glycine ligase [Legionella pneumophila str.
           Paris]
 gi|53751379|emb|CAH12797.1| Phosphoribosylamine-glycine ligase [Legionella pneumophila str.
           Paris]
          Length = 439

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 25/129 (19%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+ KY +P + K  V +S+      +  L    YVVK+                   
Sbjct: 110 ARELMEKYGIPGLPKYKVFTSLEGIREFLSELGENNYVVKA---------NGLMAGKGVK 160

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG  +  S +  ++  +EI                   + +E+   I +E       D 
Sbjct: 161 VGGEHL-LSFEEALNYCKEIFTHN-------------QSLVIEEKL-IGQEFSFMCFSDG 205

Query: 127 TSGMVAFIA 135
            S +   I 
Sbjct: 206 ISLVPMPIV 214


>gi|55822032|ref|YP_140473.1| phosphoribosylamine--glycine ligase [Streptococcus thermophilus
           CNRZ1066]
 gi|116627006|ref|YP_819625.1| phosphoribosylamine--glycine ligase [Streptococcus thermophilus
           LMD-9]
 gi|55738017|gb|AAV61658.1| phosphoribosylamine-glycine ligase (GAR synthetase) [Streptococcus
           thermophilus CNRZ1066]
 gi|116100283|gb|ABJ65429.1| phosphoribosylamine--glycine ligase [Streptococcus thermophilus
           LMD-9]
 gi|312277455|gb|ADQ62112.1| Phosphoribosylamine-glycine ligase (GAR synthetase) [Streptococcus
           thermophilus ND03]
          Length = 420

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEATHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|327305071|ref|XP_003237227.1| carbamoyl-phosphate synthase subunit arginine-specific large
           [Trichophyton rubrum CBS 118892]
 gi|326460225|gb|EGD85678.1| carbamoyl-phosphate synthase subunit arginine-specific large
           [Trichophyton rubrum CBS 118892]
          Length = 1183

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + +SSV  A +A   +  P+ V  +    G                G  
Sbjct: 231 LNEINIPIAESIAVSSVDDALAAADKIGYPIIVRSAYALGGL---------------GSG 275

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+   +       L             +    + VE      +E+   ++ D ++  +
Sbjct: 276 FASTPDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDASNNCI 322

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 323 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 375

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 376 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 420


>gi|302506757|ref|XP_003015335.1| hypothetical protein ARB_06458 [Arthroderma benhamiae CBS 112371]
 gi|291178907|gb|EFE34695.1| hypothetical protein ARB_06458 [Arthroderma benhamiae CBS 112371]
          Length = 1336

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + +SSV  A +A   +  P+ V  +    G                G  
Sbjct: 384 LNEINIPIAESIAVSSVDDALAAADKIGYPIIVRSAYALGGL---------------GSG 428

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+   +       L             +    + VE      +E+   ++ D ++  +
Sbjct: 429 FASTPDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDASNNCI 475

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 476 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 528

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 529 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 573


>gi|289669469|ref|ZP_06490544.1| phosphoribosylamine--glycine ligase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 431

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + V AA + ++    P+ VVK+   A G+             
Sbjct: 108 AKDFLARHGIPTAYYAVHTDVDAALAYVREKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++  + 
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGKH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|229822078|ref|YP_002883604.1| phosphoribosylamine/glycine ligase [Beutenbergia cavernae DSM
           12333]
 gi|229567991|gb|ACQ81842.1| phosphoribosylamine/glycine ligase [Beutenbergia cavernae DSM
           12333]
          Length = 433

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V ++     +A+     P YVVK    A G+G     +  A  +
Sbjct: 106 AKEIMAAAGVPTAMAHVCTTPDEVAAALDAFG-PPYVVKDDGLAAGKGVVVTSDREAAVE 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
             +      +     I E L    ++      G  V  V +    D  R
Sbjct: 165 HALACVRRSRRSAVVIEEFLDGPEVSLFCLSDGENV--VPLAPAQDFKR 211


>gi|289663883|ref|ZP_06485464.1| phosphoribosylamine--glycine ligase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 431

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + V AA + ++    P+ VVK+   A G+             
Sbjct: 108 AKDFLARHGIPTAYYAVHTDVDAALAYVREKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++  + 
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGKH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|282899544|ref|ZP_06307508.1| cphA (Cyanophycin synthetase) [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195423|gb|EFA70356.1| cphA (Cyanophycin synthetase) [Cylindrospermopsis raciborskii
           CS-505]
          Length = 860

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 15/110 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    VPV KG VI+ +   E AI  + G   V+K     G  G+G   +       
Sbjct: 200 KRILANSGVPVPKGTVINFLDDLEEAIDYVGGYPIVIKP--LDGNHGRGITID------- 250

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGAD 113
            +R     ++     R++  S ++ +       RV       V V +   
Sbjct: 251 -IRSWDDAETAYHSARQVSRSIIVERYYVGRDHRVLVVDGKVVAVAERVP 299


>gi|241518511|ref|YP_002979139.1| cyanophycin synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240862924|gb|ACS60588.1| cyanophycin synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 910

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  +P   G V+SS   A  A ++L  P+ V+K      GRG        ++   
Sbjct: 234 KRLLIEAGLPAPWGTVVSSAEEAVEAAQSLGLPV-VIKPVDGNHGRGVNIGLSSQSE--- 289

Query: 69  GVRVESSLKSVISDIREIL 87
              VE   +   +   ++L
Sbjct: 290 ---VEWGFEQARAHSSQVL 305


>gi|28198732|ref|NP_779046.1| phosphoribosylamine--glycine ligase [Xylella fastidiosa Temecula1]
 gi|182681425|ref|YP_001829585.1| phosphoribosylamine--glycine ligase [Xylella fastidiosa M23]
 gi|32129873|sp|Q87D59|PUR2_XYLFT RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|28056823|gb|AAO28695.1| phosphoribosylamine-glycine ligase [Xylella fastidiosa Temecula1]
 gi|182631535|gb|ACB92311.1| phosphoribosylamine--glycine ligase [Xylella fastidiosa M23]
 gi|307579872|gb|ADN63841.1| phosphoribosylamine--glycine ligase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 430

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+  V ++V AA S ++    P+ V+K+   A G+             
Sbjct: 108 AKDFMARHGIPTARYAVHTNVDAAISDVRQQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + IR++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTVTEAEAAIRDML----SGNAFGHAGARV---VIEEYLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|307296816|ref|ZP_07576634.1| cyanophycin synthetase [Sphingobium chlorophenolicum L-1]
 gi|306877729|gb|EFN08955.1| cyanophycin synthetase [Sphingobium chlorophenolicum L-1]
          Length = 925

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LL +  +PV +G+V+ S  AA    + L  P  VVK      GRG        A+ +
Sbjct: 256 AKRLLDEAGLPVPRGMVVRSEEAAVRESRRLRRP-LVVKPLDGNHGRGVTTQVREEAELR 314

Query: 68  GGVRVE 73
             V   
Sbjct: 315 AAVARA 320


>gi|194862762|ref|XP_001970110.1| GG23557 [Drosophila erecta]
 gi|190661977|gb|EDV59169.1| GG23557 [Drosophila erecta]
          Length = 1348

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V ++ +     + EILG  
Sbjct: 160 -GVVVATNAEEACQAVDEILGQL 181


>gi|326798542|ref|YP_004316361.1| carbamoyl-phosphate synthase, large subunit [Sphingobacterium sp.
           21]
 gi|326549306|gb|ADZ77691.1| carbamoyl-phosphate synthase, large subunit [Sphingobacterium sp.
           21]
          Length = 938

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E + +   LL++ ++P  K  V  +   A      +  P+ V  S +  GG+G   
Sbjct: 666 MDLAEDRGRFSDLLKELDIPYPKYGVAENAEEALKVANEVGYPVLVRPSYVL-GGQGMSI 724

Query: 59  FKELPADSKGGVRVESS 75
                   K  +++  +
Sbjct: 725 VINDEELEKAVIKIMKN 741


>gi|55820143|ref|YP_138585.1| phosphoribosylamine--glycine ligase [Streptococcus thermophilus LMG
           18311]
 gi|55736128|gb|AAV59770.1| phosphoribosylamine-glycine ligase (GAR synthetase) [Streptococcus
           thermophilus LMG 18311]
          Length = 420

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEATHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|71275855|ref|ZP_00652139.1| Phosphoribosylglycinamide synthetase [Xylella fastidiosa Dixon]
 gi|71899351|ref|ZP_00681511.1| Phosphoribosylglycinamide synthetase [Xylella fastidiosa Ann-1]
 gi|170730162|ref|YP_001775595.1| phosphoribosylamine--glycine ligase [Xylella fastidiosa M12]
 gi|71163433|gb|EAO13151.1| Phosphoribosylglycinamide synthetase [Xylella fastidiosa Dixon]
 gi|71730865|gb|EAO32936.1| Phosphoribosylglycinamide synthetase [Xylella fastidiosa Ann-1]
 gi|167964955|gb|ACA11965.1| Phosphoribosylamine--glycine ligase [Xylella fastidiosa M12]
          Length = 430

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+  V ++V AA S ++    P+ V+K+   A G+             
Sbjct: 108 AKNFLARHGIPTARYAVHTNVDAAISDVRQQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + IR++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTVTEAEAAIRDML----SGNAFGHAGARV---VIEEYLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|296268163|ref|YP_003650795.1| phosphoribosylamine/glycine ligase [Thermobispora bispora DSM
           43833]
 gi|296090950|gb|ADG86902.1| phosphoribosylamine/glycine ligase [Thermobispora bispora DSM
           43833]
          Length = 420

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 33/125 (26%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++   A +A+     P YVVK    A G+             
Sbjct: 113 AKEVMAAAGVPTARSFVCTTEQEAAAALDAFG-PPYVVKDDGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V       ++  R                     V +E+  D   EL L  L D +
Sbjct: 159 -GVVVTEDRDRALAHARA-----------------CERVVIEEFLD-GPELSLFALCDGS 199

Query: 128 SGMVA 132
           + +  
Sbjct: 200 TAVPL 204


>gi|295116257|emb|CBL37104.1| phosphoribosylamine--glycine ligase [butyrate-producing bacterium
           SM4/1]
          Length = 424

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A      +   A  A         V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYENFDNADEA-LAYLETASMPIVLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ I    ++ K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVKSI----MLDKKFGSAG---NQMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKIMTSAQD 212


>gi|86607739|ref|YP_476501.1| acetyl coenzyme A synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556281|gb|ABD01238.1| putative acetyl coenzyme A synthetase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 928

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 42/189 (22%)

Query: 231 NALYRHL------DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD 284
           +A +R         I++L D++E  +++   +  +L+          + N  G  +   D
Sbjct: 288 DAAFRRCGVLRVDHIEDLFDLAEVLAKQPRPQGPHLT---------ILTNAGGPGVLATD 338

Query: 285 IIKLYGGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKG 323
            +   GG+ A                     N +D+ G AD ++ A   +++  D   +G
Sbjct: 339 ALIRAGGSLAQLSPQTLEQLERILPPHWSHGNPIDILGDADPERFAQVLEVVLQDPGSQG 398

Query: 324 ILINIFGGIMRCD--VLVKGILSAVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVIT 380
            L+ I       D     + ++   +      P++   + GA VD G  ++ ++G+    
Sbjct: 399 CLV-ILTPQAMTDPTATAEKVVETWRRSGSRQPILASWMGGAGVDAGEHILNQAGIPTYR 457

Query: 381 AIDLDDAAQ 389
             D   AA+
Sbjct: 458 YPD--QAAR 464



 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 84/242 (34%), Gaps = 45/242 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  Y +PV    V  S  AA  A + +  P+ VVK   H            
Sbjct: 511 LTEVESKEILAAYGIPVVPTRVAESPEAAVEAAEAMGYPV-VVKLYSHTL---------T 560

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYL 120
                GGV++     ++V     +IL +  ++++ GP       V V+   D    EL L
Sbjct: 561 HKTDVGGVQLNLPDAEAVRRAFGQILRN--VSEKAGPE--HFQGVTVQPMVDTDGYELIL 616

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED---VASLCDML 177
               D   G V    S  GG  +E               D  IG+   +      L +  
Sbjct: 617 GSSQDPQFGPVLLFGS--GGQLVEVFQ------------DRSIGLPPLNTTLARRLMENT 662

Query: 178 ----------ELQGQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGRLRVLDSKI 226
                                 L     +   + +++  ++INPL+    G L  LD+++
Sbjct: 663 LIYKALRGVRGRPAVDLEALEQLLVRFSQLVAEQREIKEIDINPLLASSEG-LLALDARV 721

Query: 227 SF 228
             
Sbjct: 722 IL 723


>gi|115524384|ref|YP_781295.1| CoA-binding domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115518331|gb|ABJ06315.1| CoA-binding domain protein [Rhodopseudomonas palustris BisA53]
          Length = 694

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  + ALL    +PV    +  ++  AE+A   +  P+ V         + +     L
Sbjct: 480 LNEADSLALLASRGIPVVPHRLCRTLAEAEAAFDAIGSPVVVKGCSAEIAHKSELGLVRL 539

Query: 63  PADSKGGVRVESSLKSVISDIRE 85
              S+  V        VI   R 
Sbjct: 540 GVCSREAVGEAFIAMEVIIHARR 562


>gi|116254817|ref|YP_770653.1| putative acyl-CoA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115259465|emb|CAK10603.1| putative acyl-CoA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 684

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 73/223 (32%), Gaps = 29/223 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AKA L  + +P+ +G++ SS   A    + L  P+ V+K+               
Sbjct: 479 LTEADAKAELAAFGLPIPRGLLASSPGQAAEQAERLGFPV-VLKA-----------LGIA 526

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G V    +L+ + +       S          G  V    ++       EL +  
Sbjct: 527 HKTEAGAV--ALNLEDIKAV------SNAAAAMPPNAGYLVEK-MIDPPV---AELIVGA 574

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
           + D   G+   + +  GG+ +E +       +     D    ++   +A L         
Sbjct: 575 IRDPVFGLSLTLGA--GGIFVELLEDSIILPLPATKTDIRAAISRLKLAKLIGGYRGRPK 632

Query: 182 QARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVL 222
                   +              L  L+INPL+++  GR   +
Sbjct: 633 GDLEAAVGVVSATADYVVKNAACLEELDINPLMVLPEGRGVAV 675


>gi|326477123|gb|EGE01133.1| carbamoyl-phosphate synthase subunit arginine-specific large
           [Trichophyton equinum CBS 127.97]
          Length = 1185

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + +SSV  A +A   +  P+ V  +    G                G  
Sbjct: 233 LNEINIPIAESIAVSSVDDALAAADKIGYPIIVRSAYALGGL---------------GSG 277

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+   +       L             +    + VE      +E+   ++ D ++  +
Sbjct: 278 FASNPDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDASNNCI 324

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 325 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 377

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 378 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 422


>gi|254421594|ref|ZP_05035312.1| cyanophycin synthetase [Synechococcus sp. PCC 7335]
 gi|196189083|gb|EDX84047.1| cyanophycin synthetase [Synechococcus sp. PCC 7335]
          Length = 925

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 15/110 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    +PV KG V+ S+   E ++  L G   VVK     G  G+G    + +  + 
Sbjct: 224 KRMLGNAGIPVPKGTVVYSLRELEESLDYLGGYPIVVKP--LDGNHGRGITLNISSWEQA 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGAD 113
                   ++     R++    ++         R+       V V +   
Sbjct: 282 --------EAAYDLARQVSDGVIVEHHYQGRDHRILVVDNKMVAVAERVP 323


>gi|326472012|gb|EGD96021.1| carbamoyl-phosphate synthase [Trichophyton tonsurans CBS 112818]
          Length = 1185

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + +SSV  A +A   +  P+ V  +    G                G  
Sbjct: 233 LNEINIPIAESIAVSSVDDALAAADKIGYPIIVRSAYALGGL---------------GSG 277

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+   +       L             +    + VE      +E+   ++ D ++  +
Sbjct: 278 FASNPDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDASNNCI 324

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 325 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 377

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 378 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 422


>gi|293334485|ref|NP_001169545.1| hypothetical protein LOC100383422 [Zea mays]
 gi|224030027|gb|ACN34089.1| unknown [Zea mays]
          Length = 522

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    +    A+  +K    P+ VVK+   A G+              
Sbjct: 196 KKLCDKYNIPTAKYHTFTDAVEAKKYVKNEGAPI-VVKADGLAAGK-------------- 240

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   +  I  +L    +    G  G   + V +E+  +     + +L+ D  +
Sbjct: 241 GVVVAMTLDEALEAIDSML----VEGSFGSAG---SRVIIEEFLEGEEASFFALV-DGEN 292

Query: 129 GMVA 132
            +  
Sbjct: 293 ALPL 296


>gi|224476306|ref|YP_002633912.1| carbamoyl phosphate synthase large subunit [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|254813602|sp|B9DPN2|CARB_STACT RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|222420913|emb|CAL27727.1| carbamoyl-phosphate synthase, large chain [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 1057

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LL K +VP  KG   +S   A    + +  P+ V  S +  G
Sbjct: 669 EFEA--LLNKIDVPQPKGKTATSPEEALENAREIGYPVVVRPSYVLGG 714


>gi|163792391|ref|ZP_02186368.1| putative pimeloyl-CoA synthetase [alpha proteobacterium BAL199]
 gi|159182096|gb|EDP66605.1| putative pimeloyl-CoA synthetase [alpha proteobacterium BAL199]
          Length = 704

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 23/65 (35%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
             +L  Y +P    +V+ +   A + +  +  PL V  +      R +     L  +   
Sbjct: 494 MEILAAYGIPTPPSLVVGNASEAVARVAEVGFPLAVKIASKDIAHRSELGGVVLGVNDVD 553

Query: 69  GVRVE 73
           G+   
Sbjct: 554 GLSAA 558


>gi|325921880|ref|ZP_08183691.1| phosphoribosylamine--glycine ligase [Xanthomonas gardneri ATCC
           19865]
 gi|325547582|gb|EGD18625.1| phosphoribosylamine--glycine ligase [Xanthomonas gardneri ATCC
           19865]
          Length = 431

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++  + 
Sbjct: 154 -GVIVAMTLNEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGKH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|311029273|ref|ZP_07707363.1| phosphoribosylamine--glycine ligase [Bacillus sp. m3-13]
          Length = 423

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A     +    A + I+    P+ V+K+   A G+             
Sbjct: 106 AKDLMKKYGIPTAGYETFTDYEEARTYIEGKGAPI-VLKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  + E++  +         G   + + +E+  +   E      V+  
Sbjct: 152 -GVVVAMTDEEALEAVHEMMAESKF-------GEASSKLVIEEFLE-GEEFSFMAFVNGE 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 KVYPMVIA 210


>gi|6322569|ref|NP_012643.1| Cpa2p [Saccharomyces cerevisiae S288c]
 gi|115631|sp|P03965|CARB_YEAST RecName: Full=Carbamoyl-phosphate synthase arginine-specific large
           chain; AltName: Full=Arginine-specific
           carbamoyl-phosphate synthetase, ammonia chain
 gi|171310|gb|AAA66902.1| carbamyl phosphate synthetase large subunit [Saccharomyces
           cerevisiae]
 gi|1015822|emb|CAA89639.1| CPA2 [Saccharomyces cerevisiae]
 gi|151945174|gb|EDN63425.1| carbamoyl phosphate synthetase large subunit [Saccharomyces
           cerevisiae YJM789]
 gi|190409581|gb|EDV12846.1| carbamyl phosphate synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207343792|gb|EDZ71144.1| YJR109Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273134|gb|EEU08089.1| Cpa2p [Saccharomyces cerevisiae JAY291]
 gi|259147572|emb|CAY80823.1| Cpa2p [Saccharomyces cerevisiae EC1118]
 gi|285812996|tpg|DAA08894.1| TPA: Cpa2p [Saccharomyces cerevisiae S288c]
 gi|323332900|gb|EGA74303.1| Cpa2p [Saccharomyces cerevisiae AWRI796]
 gi|323336986|gb|EGA78243.1| Cpa2p [Saccharomyces cerevisiae Vin13]
 gi|323347900|gb|EGA82161.1| Cpa2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354285|gb|EGA86128.1| Cpa2p [Saccharomyces cerevisiae VL3]
          Length = 1118

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+  N+P+A+     +V  A  A + +  P+ V  +    G                G  
Sbjct: 157 LKDINIPIAESFACETVDEALEAAERVKYPVIVRSAYALGGL---------------GSG 201

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++   +     + L             S    + VE      +E+   ++ DR    +
Sbjct: 202 FANNASEMKELAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 248

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            ++  P   ++ E+          +   L + G+  
Sbjct: 249 TV-------CNMENFDPLGVHTGDSMVFAPSQTLSDEEFHMLRSAAIKIIRHLGVIGECN 301

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 302 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 346


>gi|113476462|ref|YP_722523.1| carbamoyl phosphate synthase large subunit [Trichodesmium
           erythraeum IMS101]
 gi|110167510|gb|ABG52050.1| carbamoyl-phosphate synthase large subunit [Trichodesmium
           erythraeum IMS101]
          Length = 1076

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 36/172 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V    + S+   A++  + +     +++     GG G         
Sbjct: 129 RQLFKEAMGRIGIQVCPSGIASNWEEAKAIAQKIGTYPLIIRPAFTLGGTG--------- 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG+        V++             Q G   S V+ + VE      +E  L ++ 
Sbjct: 180 ---GGIAYNQEEYEVMA-------------QGGIDASPVSQILVEKSLIGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           D  +  V  I S      IE +          + + P   +T ++   L D 
Sbjct: 224 D-LADNVVIICS------IENIDPMGIHTGDSVTVAPAQTLTDKEYQRLRDA 268


>gi|313115058|ref|ZP_07800548.1| phosphoribosylamine--glycine ligase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622620|gb|EFQ06085.1| phosphoribosylamine--glycine ligase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 441

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK             IK       V+K+   A G+             
Sbjct: 115 SKDLMKKYGIPTAKYETFDDPAKVMEYIKAEGKYPVVIKADGLALGK------------- 161

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +     ++EI    ++ K+ G +G   N V VE+  
Sbjct: 162 -GVLICENEQQAADGVKEI----MLDKKFGASG---NHVVVEEFL 198


>gi|256830974|ref|YP_003159702.1| carbamoyl-phosphate synthase, large subunit [Desulfomicrobium
           baculatum DSM 4028]
 gi|256580150|gb|ACU91286.1| carbamoyl-phosphate synthase, large subunit [Desulfomicrobium
           baculatum DSM 4028]
          Length = 1082

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 58/174 (33%), Gaps = 37/174 (21%)

Query: 7   QAKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +++ L RK      + V K  +  +        + L  P+ V  +    G          
Sbjct: 127 ESRQLFRKAMENIGLKVPKSGIARTQDDVREWGEKLKFPIIVRPAYTLGG---------- 176

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              + GGV    + + +    ++ L ++L ++           V +E+     +E  L +
Sbjct: 177 ---TGGGV--AYNKEDLERIAQQGLAASLTSE-----------VMLEESLLGWKEYELEV 220

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           + D+       I S      IE +          + + P   +T ++   + D 
Sbjct: 221 VRDKKDNC-VIICS------IENLDPMGVHTGDSVTVAPAQTLTDDEYQKMRDA 267


>gi|161528593|ref|YP_001582419.1| carbamoyl-phosphate synthase large subunit [Nitrosopumilus
           maritimus SCM1]
 gi|160339894|gb|ABX12981.1| carbamoyl-phosphate synthase, large subunit [Nitrosopumilus
           maritimus SCM1]
          Length = 1080

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 30/129 (23%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +    +  VPV K   +++V  A+   + L  P+ V  +    GGRG G       
Sbjct: 129 RQLFKDQMTEAGVPVLKSKTVTNVDDAKKVAEELNYPVIVRVAYTL-GGRGGG------- 180

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  +   +   +   L ++L           V  V VE+     +++   ++ 
Sbjct: 181 -------IAHNEIELHEIVERGLNASL-----------VGQVLVEEYIGHWKQIEYEVMQ 222

Query: 125 DRTSGMVAF 133
           D     V  
Sbjct: 223 DYDGNNVIV 231


>gi|152990294|ref|YP_001356016.1| carbamoyl phosphate synthase large subunit [Nitratiruptor sp.
           SB155-2]
 gi|151422155|dbj|BAF69659.1| carbamoylphosphate synthase, large subunit [Nitratiruptor sp.
           SB155-2]
          Length = 1084

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + K     S+  A  A   +  PL +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKSRYAYSMEEAMEAAAQIGFPLIIRASYTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++        +           G   S +N + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIDEFKVLAAK-----------GLEASPINEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           +    +           IE +          + I P + +T ++   + D 
Sbjct: 222 KEDNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRMRDA 265



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 48/204 (23%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            K  +         +   A      +  P+ V  S +  G                 +R+
Sbjct: 680 AKNGLKQPPNGTAFTKEDALKIADEIGYPVLVRPSYVLGG---------------RAMRI 724

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
             +   +   + E   +  ++ ++         V ++   D   EL +  + D T+  + 
Sbjct: 725 VYNENELKEYMDE---AVSVSHESP--------VLIDKFLDHAIELDVDAISDGTNVYI- 772

Query: 133 FIASTQGGM--DIEEVAKDYPQKIFKLL-IDPLIGVTSE---DVASLCDMLELQGQARID 186
                 GG+   IEE           L  +     +  E       +   L ++G   I 
Sbjct: 773 ------GGIMQHIEEAGIHSGDSACSLPTVSIDEAILHEVENQTKKIALGLGVKGLLNIQ 826

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                   Y  + D ++ L+E+NP
Sbjct: 827 --------YAIYKD-EVYLIEVNP 841


>gi|327472014|gb|EGF17453.1| phosphoribosylamine-glycine ligase [Streptococcus sanguinis SK408]
          Length = 419

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +Y+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVRYSVPTAAYGTFSDFEEAKAYIEKQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    ++L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHDML----LDNKFGDSGARV---VIEEFLD 190


>gi|257057756|ref|YP_003135588.1| phosphoribosylamine--glycine ligase [Saccharomonospora viridis DSM
           43017]
 gi|256587628|gb|ACU98761.1| phosphoribosylamine--glycine ligase [Saccharomonospora viridis DSM
           43017]
          Length = 429

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V+ S    ++A+     P +VVK    A G+             
Sbjct: 108 AKEIMAAAGVPTARSEVVDSPADLDAALARFG-PTWVVKDDGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V   L+        +L
Sbjct: 154 -GVVVTPDLEQARKHALMLL 172


>gi|161485671|ref|NP_633852.2| pyruvate carboxylase subunit A [Methanosarcina mazei Go1]
          Length = 493

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 74/220 (33%), Gaps = 51/220 (23%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ K  VPV  G    +     A    + +  P+ +  S   AGG G          
Sbjct: 119 ARHLMMKAGVPVVPGTKDAVEDPEEAMEIAEKIGYPVLIKAS---AGGGGI--------- 166

Query: 66  SKGGVRVESSLKSVI---SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              G++V  S + +    S  R++ GS              + V++E   +  R + + +
Sbjct: 167 ---GMKVVHSREELATSLSSTRQMAGSAFGD----------SSVFIEKYVEEPRHIEIQI 213

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-----TSEDVASLCDML 177
           L D  S       S     D E   +   QK+ +    P++         E    +   +
Sbjct: 214 LAD--SHGNMVYLS-----DRECSIQRRHQKLIEEAPSPIMTPELRKQMGEAAVKVAKAI 266

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  ++           +   +   LE+N  + +++G
Sbjct: 267 GYVNAGTVEF---------LYSKGNFYFLEVNTRLQVEHG 297


>gi|256085881|ref|XP_002579139.1| acetyl-CoA carboxylase; methylcrotonyl-CoA carboxylase [Schistosoma
           mansoni]
 gi|238664549|emb|CAZ35378.1| acetyl-CoA carboxylase [Schistosoma mansoni]
          Length = 1101

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K +  +  V    G    +     A      +  P+ ++K+    GG+          
Sbjct: 75  ESKRIANQAKVNCIPGYDGEVDGPDEAARIAAEIGYPV-MIKASTGGGGK---------- 123

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    K V        G  L   +   +    + + +E   D  R + + LL 
Sbjct: 124 ----GMRIAWDEKEVRE------GYRLSKSEAKASFGD-DRMLIEKFIDNPRHIEIQLLC 172

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           DR    +      +    I+   +   ++     +D  L     E   SL   +      
Sbjct: 173 DRHGNAIYL---NERECSIQRRNQKVIEEAPSTFLDSGLRKAMGEQAVSLAKAVNYDSAG 229

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 230 TVEFLVDSKRNFY--FLEMNTRLQVEHPITECITG 262


>gi|256085879|ref|XP_002579138.1| acetyl-CoA carboxylase; methylcrotonyl-CoA carboxylase [Schistosoma
           mansoni]
 gi|238664548|emb|CAZ35377.1| acetyl-CoA carboxylase [Schistosoma mansoni]
          Length = 1189

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K +  +  V    G    +     A      +  P+ ++K+    GG+          
Sbjct: 163 ESKRIANQAKVNCIPGYDGEVDGPDEAARIAAEIGYPV-MIKASTGGGGK---------- 211

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    K V        G  L   +   +    + + +E   D  R + + LL 
Sbjct: 212 ----GMRIAWDEKEVRE------GYRLSKSEAKASFGD-DRMLIEKFIDNPRHIEIQLLC 260

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           DR    +      +    I+   +   ++     +D  L     E   SL   +      
Sbjct: 261 DRHGNAIYL---NERECSIQRRNQKVIEEAPSTFLDSGLRKAMGEQAVSLAKAVNYDSAG 317

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 318 TVEFLVDSKRNFY--FLEMNTRLQVEHPITECITG 350


>gi|225570405|ref|ZP_03779430.1| hypothetical protein CLOHYLEM_06505 [Clostridium hylemonae DSM
           15053]
 gi|225160776|gb|EEG73395.1| hypothetical protein CLOHYLEM_06505 [Clostridium hylemonae DSM
           15053]
          Length = 1065

 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 31/105 (29%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    +P   G  + +   A+     L  P+ V  S +  GG+G              
Sbjct: 673 EILEACRIPRPTGGTVYTAEEAKEVANRLGYPVLVRPSYVL-GGQGMQIAIND------- 724

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   I  I  I     I       G  +    V DG DI
Sbjct: 725 ----HDIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGEDI 765


>gi|127512967|ref|YP_001094164.1| GCN5-related N-acetyltransferase [Shewanella loihica PV-4]
 gi|126638262|gb|ABO23905.1| GCN5-related N-acetyltransferase [Shewanella loihica PV-4]
          Length = 900

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 15/140 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A A+L+ Y +   +    +S   A    + +  P+  +K Q               +D
Sbjct: 498 HEASAILKAYGLNTIETHFAASAERAAEIAEQIGYPV-ALKVQ--------SPDIHHKSD 548

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G +   +S + V+     ++G    I +     G  V  + +  G    +E+ +++  
Sbjct: 549 VHGVMLNLTSHQEVLQAADAMVGRVHSINQDADIQGLIVQKMALTAGT---QEIRVAVTH 605

Query: 125 DRTSGMVAFIASTQGGMDIE 144
           D   G    +   +GG + +
Sbjct: 606 DPVFGPAILLG--EGGSEWQ 623


>gi|328953823|ref|YP_004371157.1| carbamoyl-phosphate synthase, large subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454147|gb|AEB09976.1| carbamoyl-phosphate synthase, large subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 1066

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + +  + +S   AE     L  P+ V  +    G  G             
Sbjct: 133 KETMNRLGIDMPESAIATSPEEAERIADKLGYPVVVRPAYTMGGWGG------------- 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +L+ + +     + ++L           V  + VE+      EL L ++ D  +
Sbjct: 180 --GLVYNLEELRTIASRGISASL-----------VGQILVEESVLGWEELELEVVRDAKN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 QMITV 231



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +  +P  +  + +S+  A  A + +  PL V  S +  G
Sbjct: 674 MARLGIPQPESDMAASLEEALEAARRIGYPLMVRPSYVLGG 714


>gi|254431444|ref|ZP_05045147.1| phosphoribosylamine--glycine ligase [Cyanobium sp. PCC 7001]
 gi|197625897|gb|EDY38456.1| phosphoribosylamine--glycine ligase [Cyanobium sp. PCC 7001]
          Length = 418

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 15/84 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+++  VP A      S+  A + ++    P  VVK+   A G+             
Sbjct: 103 AKALMQEAGVPTAGFWPADSLSRALAILEEQGRP-LVVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTL 91
            GV V  +L+     + EI     
Sbjct: 149 -GVTVAETLEEARHAVEEIFAGRF 171


>gi|281417667|ref|ZP_06248687.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum JW20]
 gi|281409069|gb|EFB39327.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum JW20]
          Length = 1072

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  I ++  A  A   L  P+ V  S +  G                G
Sbjct: 675 RILEELGIPRPKGKTIFTLDEALEAANELGYPVLVRPSYVLGG---------------QG 719

Query: 70  VRVESSLKSVISDIREILG---STLITKQTGPTGSRVNCVYVEDGADI 114
           + +  + K ++  +  I        I       G  +    + DG DI
Sbjct: 720 MEIAYNDKDIVEFMEIINRVKQEHPILIDKYMMGKEIEVDAISDGEDI 767



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 41/223 (18%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + +   P     V+++V  A    K +  P+ V  +    G             
Sbjct: 130 QAFKDTMERIGEPCIASKVVNTVEDALDFAKEIAYPVVVRPAYTLGG------------- 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + GG+    + + +       L  +           RV+ V +E      +E+   ++  
Sbjct: 177 TGGGI--AYNEEELKEIASNGLRLS-----------RVHQVLIEKCIAGWKEIEYEVM-- 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLE 178
           R S            +D   V       I   ++ P   +T  +          +   L 
Sbjct: 222 RDSKGNVITVCNMENIDP--VGVHTGDSI---VVAPSQTLTDREYQMLRSSALKIISALG 276

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           ++G   +       +   A  + +  +   + L     G    
Sbjct: 277 IEGGCNVQFALNPNSFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|158523073|ref|YP_001530943.1| CoA-binding domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511899|gb|ABW68866.1| CoA-binding domain protein [Desulfococcus oleovorans Hxd3]
          Length = 711

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 79/232 (34%), Gaps = 26/232 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           E +   +L  Y   V    +  +   A +  K +  P+   +V  QI      K     +
Sbjct: 492 ELEGNEVLSCYGFSVLPTKLAETPEQAVAIAKEMGYPVVMKIVSPQIIH----KSEADGV 547

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               K    V ++   +++  R             P    +  V V+  +   +E+ L +
Sbjct: 548 RVGLKTDKEVNAAFDEIVAGARA----------YNPKAH-IRGVLVQKFSPAGQEVILGV 596

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
                 G +       GG+ +E       +       + +  + S  + S   +   +G+
Sbjct: 597 NRYPGFGHLLMFG--LGGIFVELFKDVVFRLAPIGRNNAVRMIKS--IRSFPMLDGFRGK 652

Query: 183 ARIDGG---DLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFD 229
            + D      L   L     D  ++  L+INPLI+   G+   V D +I  D
Sbjct: 653 PKSDIAVLQKLLVCLSDMVMDNPEIVELDINPLIVHDQGKGATVADVRIIID 704


>gi|158319593|ref|YP_001512100.1| phosphoribosylamine--glycine ligase [Alkaliphilus oremlandii
           OhILAs]
 gi|158139792|gb|ABW18104.1| phosphoribosylamine--glycine ligase [Alkaliphilus oremlandii
           OhILAs]
          Length = 416

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 34/162 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KY++P AK   + ++    +A++    P+ VVK+   A G+             
Sbjct: 106 AKAFMDKYHIPTAKYDEVHTLEEGIAALEKYSYPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +   + ++E+L   ++    G  G  V    +E+    +     S+L    
Sbjct: 152 -GVFICESKEEAAAAMKELLEDQIL----GDAGKDV---VIEEFLSGIE---TSILCFVD 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLID 160
              +  + S+Q          G +   +    P  ++   I+
Sbjct: 201 GKTIVPMVSSQDHKRAFDGDQGPNTGGMGTYSPNYVYTEDIE 242


>gi|125973466|ref|YP_001037376.1| carbamoyl phosphate synthase large subunit [Clostridium
           thermocellum ATCC 27405]
 gi|256005363|ref|ZP_05430328.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum DSM 2360]
 gi|125713691|gb|ABN52183.1| carbamoyl-phosphate synthase large subunit [Clostridium
           thermocellum ATCC 27405]
 gi|255990682|gb|EEU00799.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum DSM 2360]
 gi|316940297|gb|ADU74331.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           thermocellum DSM 1313]
          Length = 1072

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  I ++  A  A   L  P+ V  S +  G                G
Sbjct: 675 RILEELGIPRPKGKTIFTLDEALEAANELGYPVLVRPSYVLGG---------------QG 719

Query: 70  VRVESSLKSVISDIREILG---STLITKQTGPTGSRVNCVYVEDGADI 114
           + +  + K ++  +  I        I       G  +    + DG DI
Sbjct: 720 MEIAYNDKDIVEFMEIINRVKQEHPILIDKYMMGKEIEVDAISDGEDI 767



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 41/223 (18%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + +   P     V+++V  A    K +  P+ V  +    G             
Sbjct: 130 QAFKDTMERIGEPCIASKVVNTVEDALDFAKEIAYPVVVRPAYTLGG------------- 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + GG+    + + +       L  +           RV+ V +E      +E+   ++  
Sbjct: 177 TGGGI--AYNEEELKEIASNGLRLS-----------RVHQVLIEKCIAGWKEIEYEVM-- 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLE 178
           R S            +D   V       I   ++ P   +T  +          +   L 
Sbjct: 222 RDSKGNVITVCNMENIDP--VGVHTGDSI---VVAPSQTLTDREYQMLRSSALKIISALG 276

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           ++G   +       +   A  + +  +   + L     G    
Sbjct: 277 IEGGCNVQFALNPNSFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|323308500|gb|EGA61745.1| Cpa2p [Saccharomyces cerevisiae FostersO]
          Length = 995

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+  N+P+A+     +V  A  A + +  P+ V  +    G                G  
Sbjct: 34  LKDINIPIAESFACETVDEALEAAERVKYPVIVRSAYALGGL---------------GSG 78

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++   +     + L             S    + VE      +E+   ++ DR    +
Sbjct: 79  FANNASEMKELAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 125

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            ++  P   ++ E+          +   L + G+  
Sbjct: 126 TV-------CNMENFDPLGVHTGDSMVFAPSQTLSDEEFHMLRSAAIKIIRHLGVIGECN 178

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 179 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 223


>gi|162452357|ref|YP_001614724.1| Acyl-activating enzyme [Sorangium cellulosum 'So ce 56']
 gi|161162939|emb|CAN94244.1| Acyl-activating enzyme [Sorangium cellulosum 'So ce 56']
          Length = 914

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 30/182 (16%)

Query: 231 NALYRH------LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV------NGAGL 278
           +A +R        DI +L  ++E  +++   + + L  +   G  G +       NG  L
Sbjct: 286 DAAFRRVGVLRVNDIADLFSMAETLAKQPRPRGNRLCIVTNAGGPGVLATDALVANGGEL 345

Query: 279 AMATMDII-KLYGGAPA-----NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI 332
           A  + +I+ +L G  PA     N +DV G A  D+ A A +I   D    G+L+     I
Sbjct: 346 APLSPEILGELSGFLPAAWSRNNPVDVLGDAGADRYAKALEICAKDPHNDGVLV-----I 400

Query: 333 MRCDVLVK--GILSAVKE---VKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
           +    + +      A+++   V     L   + G  V+ G  ++  +G+      D   A
Sbjct: 401 LTPQDMTEPTQTAEALRKHAHVDGKPVLASWMGGVEVEAGKAILNRAGVPTFEYPDT--A 458

Query: 388 AQ 389
           A+
Sbjct: 459 AR 460



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 2/86 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K L+  Y +P     V  S   A +    +  P  +         +      +L
Sbjct: 508 LDEVESKQLMAAYGIPTVPTAVARSADEAVATAGEMGYPAVLKLYSATITHKTDVGGVKL 567

Query: 63  PADSKGGVRVESSLKSVISDIREILG 88
                  VR     + +   +    G
Sbjct: 568 DLRDDDAVRRAF--EEIQESVSRRAG 591


>gi|56750828|ref|YP_171529.1| carbamoyl phosphate synthase large subunit [Synechococcus elongatus
           PCC 6301]
 gi|81299522|ref|YP_399730.1| carbamoyl phosphate synthase large subunit [Synechococcus elongatus
           PCC 7942]
 gi|56685787|dbj|BAD79009.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Synechococcus elongatus PCC 6301]
 gi|81168403|gb|ABB56743.1| carbamoyl-phosphate synthase large subunit [Synechococcus elongatus
           PCC 7942]
          Length = 1097

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 56/169 (33%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + +++  A++  + +     +++     GG G G           
Sbjct: 133 KEAMERIGVKVCPSGIANNMAEAQAIAEQIGTYPLIIRPAFTMGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +     +           Q+G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFELIV-----------QSGLDASPVSQILVEQSLIGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S      IE +          + + P   +T ++   L D  
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDQA 269



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +LR+ ++      +  S   A +    +  P  V  S +  G
Sbjct: 702 QILRQLDIAQPANGLARSPEEALAIAHRIGYPTVVRPSYVLGG 744


>gi|325926801|ref|ZP_08188108.1| phosphoribosylamine--glycine ligase [Xanthomonas perforans 91-118]
 gi|325542822|gb|EGD14278.1| phosphoribosylamine--glycine ligase [Xanthomonas perforans 91-118]
          Length = 431

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++  + 
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGKH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|260219517|emb|CBA26362.1| Phosphoribosylamine--glycine ligase [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 435

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA +R++ +P A+    S   AA + +  +  P  VVK+   A G+             
Sbjct: 106 SKAFMRRHGIPTAEYATFSDPVAAHAYVDKMGAPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GV V  ++      I  +L   +  +    G  G  V  V +E+  +   E    ++VD
Sbjct: 152 -GVVVAMTVGEAHEAIDFMLVDNTLGVAHNDGADGVAVPRVVIEEFLE-GEEASFIVMVD 209

Query: 126 RTSGMVA 132
             + +  
Sbjct: 210 GKNVLPL 216


>gi|291456361|ref|ZP_06595751.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium breve
           DSM 20213]
 gi|291381638|gb|EFE89156.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium breve
           DSM 20213]
          Length = 1127

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 27/201 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  GGRG              
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVL-GGRGM-EIVYDDKQLNKY 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    +     + +   L S L+  +       ++     D     +ELY+  +++    
Sbjct: 740 VDRALAEAQADTVVSGRLPSPLLIDKFLQDAIEIDV----DALFDGKELYIGGIMEH--- 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                        +EE           L   P   ++ + +  L +       A      
Sbjct: 793 -------------VEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAAGCHVQ 834

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  AF    + ++E NP
Sbjct: 835 GLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   + L  PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSRIAHSLEECDKIAEELGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|158520138|ref|YP_001528008.1| carbamoyl-phosphate synthase, large subunit [Desulfococcus
           oleovorans Hxd3]
 gi|158508964|gb|ABW65931.1| carbamoyl-phosphate synthase, large subunit [Desulfococcus
           oleovorans Hxd3]
          Length = 1075

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 34/155 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L RK      + + +  + +S+    +    +  PL V  S    G            
Sbjct: 129 RDLFRKAMNNIGLRIPRSGIATSMDQVRAIADEIGLPLIVRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    +   + +     L ++L           +N V +E+     +E  L ++ 
Sbjct: 177 -TGGGV--AHTQAELDALSAGGLEASL-----------INQVMIEESVVGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159
           DR +  V  I S +   +++ +     + I    I
Sbjct: 223 DR-ADNVVIICSIE---NLDPMGVHTGESITVAPI 253


>gi|325294322|ref|YP_004280836.1| carbamoyl-phosphate synthase, large subunit [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064770|gb|ADY72777.1| carbamoyl-phosphate synthase, large subunit [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 1071

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 37/163 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V K  +  S+  A   +K +  P  +  +    G            
Sbjct: 129 RELFKEAMLKIGLEVPKSGLARSLDEAMEVVKEVGLPAIIRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV    +++      +  L ++            +N + +E+     +E  L ++ 
Sbjct: 177 -EGGGV--AYNIEEFKEIAKRGLDAS-----------PINEILIEESVLGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           D  +  V  I S      IE +          + + P   +T 
Sbjct: 223 D-LNDNVVIICS------IENIDPMGVHTGDSITVAPAQTLTD 258


>gi|295105189|emb|CBL02733.1| phosphoribosylamine--glycine ligase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 434

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK             I+       V+K+   A G+             
Sbjct: 108 SKDLMKKYGIPTAKYETFDDPAKVMDYIRAEGKYPVVIKADGLALGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +     ++EI    ++ K+ G +G   N V VE+  
Sbjct: 155 -GVLICENEQEAADGVKEI----MLDKKFGASG---NHVVVEEFL 191


>gi|56418803|ref|YP_146121.1| phosphoribosylamine--glycine ligase [Geobacillus kaustophilus
           HTA426]
 gi|56378645|dbj|BAD74553.1| phosphoribosylglycinamide synthetase (glycinamide ribonucleotide
           synthetase) (phosphoribosylglycinamide synthetase)
           [Geobacillus kaustophilus HTA426]
          Length = 430

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----KGRFKELP 63
           AK L++KY +P A     +S   A++ I+    P+ V+K+   A G+G    +   + L 
Sbjct: 106 AKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAPI-VIKADGLAAGKGVTVAQTVEEALA 164

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           A     V  +         I E L     +      G +V  + +    D  R  
Sbjct: 165 AAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQ--DHKRAY 217


>gi|14520570|ref|NP_126045.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus
           abyssi GE5]
 gi|5457786|emb|CAB49276.1| acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain
           [Pyrococcus abyssi GE5]
          Length = 472

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 82/235 (34%), Gaps = 45/235 (19%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKI-----------SFDDNALYRHLDIQELRDVS 246
           F +    + +I P+I +K+GR     +K                +A+++   I    D  
Sbjct: 237 FMETAKRVTKIKPIIALKSGRTE-YGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDF- 294

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA------------ 294
             +     AK      +     IG + +G G  +   D +  +G   A            
Sbjct: 295 --EHMFDLAKAFAKCKLPKGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEETIKFLKE 352

Query: 295 ---------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDV--LVKGIL 343
                    N  DV G  D ++   A +    D +V  IL+ +   +   D   ++  I 
Sbjct: 353 RFPPHAVVGNPTDVVGDTDAERYRLALEAFIKDPNVDAILLIVLFQVPLLDEKEVIDIIT 412

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
              K+    I +V+ + G   D   +++ E G+ V          ++ V A+ G+
Sbjct: 413 DYAKKSDKPI-VVVSMGGYKTDKYAKMLEERGIPVYPTP------ERGVRALAGL 460


>gi|78046101|ref|YP_362276.1| phosphoribosylamine--glycine ligase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034531|emb|CAJ22176.1| phosphoribosylamine-glycine ligase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 431

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++  + 
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGKH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|85118469|ref|XP_965450.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Neurospora crassa OR74A]
 gi|28927259|gb|EAA36214.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Neurospora crassa OR74A]
 gi|38567193|emb|CAE76486.1| probable carbamoyl-phosphate synthase (glutamine-hydrolyzing)
           arginine-specific large chain [Neurospora crassa]
          Length = 1168

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+AK   +++V  A  A   +  P+ V  +    G               
Sbjct: 217 AKAL-EEINIPIAKSFAVNTVDEALDAANKIGYPIIVRAAYALGGL-------------- 261

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D  
Sbjct: 262 -GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVRDAN 307

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 308 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 360

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 361 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 409


>gi|319791816|ref|YP_004153456.1| cyanophycin synthetase [Variovorax paradoxus EPS]
 gi|315594279|gb|ADU35345.1| cyanophycin synthetase [Variovorax paradoxus EPS]
          Length = 855

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  ++S      A   +  P+ VVK Q   G +GKG    +    +
Sbjct: 209 KQLLNAAGVPVPLGRPVTSAEDGWVAAGEIGLPV-VVKPQ--DGNQGKGVTVNITTKEQ 264


>gi|261749247|ref|YP_003256932.1| phosphoribosylamine--glycine ligase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497339|gb|ACX83789.1| Phosphoribosylamine--glycine ligase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 411

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 22/115 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K+ ++KY V   K  V SS   A   +      + +         RG    K       
Sbjct: 105 SKSFMKKYGVRTPKYKVFSSYQEAMDFLDKTTYSVAIK-------TRGLAEGK------- 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            GV +  +         + L S LI K+ G  G   N V +E+         LS+
Sbjct: 151 -GVLLTHNKTE----AEKALNSILIEKKFGKAG---NQVIIEELLQGKESSILSI 197


>gi|330506389|ref|YP_004382817.1| carbamoyl-phosphate synthase, large subunit [Methanosaeta concilii
           GP-6]
 gi|328927197|gb|AEB66999.1| carbamoyl-phosphate synthase, large subunit [Methanosaeta concilii
           GP-6]
          Length = 1070

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + V K   I +V  AE     L  P+ V  +    G                
Sbjct: 133 KETMNSLGIEVPKSTAIYTVEDAEKVALDLGYPVVVRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  + + + + +   + ++LI             V +E+      EL L ++ D  +
Sbjct: 178 GGGLVYNAEELRTVVSRGIAASLIG-----------QVLIEESVAGWEELELEVVRDSKN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 HMITV 231



 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + + ++P+ +  + S++  A    K +  PL V  S +  GGRG
Sbjct: 677 MEELDIPMPESGMASNLDQALEVAKRIGYPLMVRPSYVL-GGRG 719


>gi|306826231|ref|ZP_07459565.1| phosphoribosylamine-glycine ligase [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304431507|gb|EFM34489.1| phosphoribosylamine-glycine ligase [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 421

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEATHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|304314250|ref|YP_003849397.1| pyruvate carboxylase, subunit A [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587709|gb|ADL58084.1| pyruvate carboxylase, subunit A [Methanothermobacter marburgensis
           str. Marburg]
          Length = 491

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 35/210 (16%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L++K  VPV  G    +S    A     ++  P+ ++K+    GG G     E    
Sbjct: 119 SKKLMKKAGVPVIPGTDKGVSDPDEAAEIADSIGYPV-IIKASAGGGGIGMRTVYEED-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  +++S  S      G                 VY+E   +  R +   ++ D
Sbjct: 176 -----ELIRAMESTQSVAASAFGDP--------------TVYIEKYLEKPRHIEFQVMAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                   I        I+   +   ++    ++ P   +     ++     E  G    
Sbjct: 217 EHGN---VIHLADRECSIQRRHQKLVEEAPSPIMTPE--LRERMGSAAVKAAEYIGYENA 271

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
              +        + + D   LE+N  I ++
Sbjct: 272 GTVEFL------YSNGDFYFLEMNTRIQVE 295


>gi|221059978|ref|XP_002260634.1| acetyl CoA synthetase [Plasmodium knowlesi strain H]
 gi|193810708|emb|CAQ42606.1| acetyl CoA synthetase, putative [Plasmodium knowlesi strain H]
          Length = 995

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 29/273 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E+ +K +L+ Y +P     V  ++   ++ +  +  P  +         +        
Sbjct: 560 LNEFDSKKILQSYGIPTVSTEVFYTLEEIQNNLSKITFPCAM---------KIYSDTITH 610

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLI-TKQTGPTGSRVNCVYVEDGADILRELYLS 121
             D  G +    + + +I   + I  +      ++   G  +    ++    I  EL L 
Sbjct: 611 KKDIGGVILNIKNKEELIESYKTIHQNVKKHNLESEFKGVTIQT-MIDTNDGI--ELILG 667

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
              D+  G V    S   G    E+ KD    I  L       +  E       + +   
Sbjct: 668 YYFDQNFGPVLMFGS---GGSYVEIFKDNVLLIPPLSYSYTHHMMKETKIYNALLGKSSR 724

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLL------EINPLIIMKNGRLRVLDSKISFDDNALYR 235
             + D   L   +   F D  + LL      +INPL +  +  +  LD++ +   N    
Sbjct: 725 FKKCDMPMLINKIIN-FSDLILDLLPYINECDINPLFVSGS-NIVALDARFTLRKNV--- 779

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGN 268
             + +  +           AK++ +  +  DG+
Sbjct: 780 --NAETFKSAKNNSLYSNFAKKYPVDMVFFDGD 810


>gi|182416339|ref|YP_001821405.1| carbamoyl phosphate synthase large subunit [Opitutus terrae PB90-1]
 gi|177843553|gb|ACB77805.1| carbamoyl-phosphate synthase, large subunit [Opitutus terrae
           PB90-1]
          Length = 1067

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +++  + + +     SV  AE     L  P+ +         R              
Sbjct: 133 KETMKRLGIDMPRSAPAFSVEEAEKVATELGYPVVI---------RPAYTLGGTGGGH-- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 +++ +       L +++           VN + VE+      EL L ++ D  +
Sbjct: 182 ----VYNVEELRVVASRGLAASM-----------VNQILVEESVLGWEELELEVVRDAKN 226

Query: 129 GMVAF 133
            ++  
Sbjct: 227 HLITV 231



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 26/69 (37%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + ++ K  +P+ +  + S+   A +    +  P+ V  S +  G   +    E       
Sbjct: 671 RQMMEKMGIPMPESGMASTFEEARAVAARIGYPVMVRPSFVLGGRAMEVVHDEAMLKDYL 730

Query: 69  GVRVESSLK 77
              ++ S +
Sbjct: 731 ARAIDVSPE 739


>gi|187735745|ref|YP_001877857.1| carbamoyl-phosphate synthase, large subunit [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187425797|gb|ACD05076.1| carbamoyl-phosphate synthase, large subunit [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 1067

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 50/172 (29%), Gaps = 36/172 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V +  +  ++  A      +     +V+     GG G G       
Sbjct: 129 RNLFKEAMLRIGLDVPRSGIAHTMEEARRVAGDIGTFPLIVRPAFTLGGMGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  V  +           L  +            V+ + +E+     +E  + ++ 
Sbjct: 182 -------VAYNKTEFEEICARGLDLS-----------PVSEILIEESLIGWKEFEMEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR    V           IE +          + + P+  +T  +  ++ D 
Sbjct: 224 DRADNCVVI-------CSIENIDPMGVHTGDSITVAPIQTLTDREYQAMRDA 268


>gi|242088645|ref|XP_002440155.1| hypothetical protein SORBIDRAFT_09g026980 [Sorghum bicolor]
 gi|241945440|gb|EES18585.1| hypothetical protein SORBIDRAFT_09g026980 [Sorghum bicolor]
          Length = 521

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY++P AK    +    A+  +K    P+ VVK+   A G+              
Sbjct: 196 KKLCDKYDIPTAKYRTFTDAVEAKKYVKNEGAPI-VVKADGLAAGK-------------- 240

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   +  I  +L    +    G  G   + V +E+  +     + +L+ D  +
Sbjct: 241 GVVVAMTLDEALEAIDSML----VEGSFGSAG---SRVIIEEFLEGEEASFFALV-DGEN 292

Query: 129 GMVA 132
            +  
Sbjct: 293 ALPL 296


>gi|320529167|ref|ZP_08030259.1| phosphoribosylamine--glycine ligase [Selenomonas artemidis F0399]
 gi|320138797|gb|EFW30687.1| phosphoribosylamine--glycine ligase [Selenomonas artemidis F0399]
          Length = 419

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+  V +    A   I+    P  V+K+   A G+             
Sbjct: 103 AKNLMKKYGIPTARYEVFTEAEPARVYIRETGAPT-VIKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  I  I    +     G  G   + V +E+  +      L+   D  
Sbjct: 149 -GVVVAMTEQEALDAIDRI----MEDGSFGAAG---SSVVIEEFMEGEEASLLAFT-DGK 199

Query: 128 SGMVAFIA 135
                  A
Sbjct: 200 VIRPMISA 207


>gi|300868973|ref|ZP_07113577.1| carbamoyl phosphate synthase large subunit [Oscillatoria sp. PCC
           6506]
 gi|300333040|emb|CBN58769.1| carbamoyl phosphate synthase large subunit [Oscillatoria sp. PCC
           6506]
          Length = 1101

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPV    +  ++  A +    +     +++     GG G G           
Sbjct: 133 KEAMARIGVPVCPSGIACNLDEARAIGHEIGSFPLIIRPAFTMGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                 Q G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---ISYNQEEFEEMA-----------QGGIDASPVSQILIEQSLIGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T ++   L D 
Sbjct: 227 DNVVIICS------IENLDPMGIHTGDSITVAPAQTLTDKEYQRLRDA 268


>gi|241554210|ref|YP_002979423.1| CoA-binding domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240863516|gb|ACS61178.1| CoA-binding domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 684

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           + E  AKA L  + +PV +G++ SS   A    + L  P+ V+K+
Sbjct: 479 LTEADAKAELAAFGLPVPQGLLASSPGQAAEQAERLGFPV-VLKA 522


>gi|307132327|ref|YP_003884343.1| putative acyl-CoA synthetase [Dickeya dadantii 3937]
 gi|306529856|gb|ADM99786.1| predicted acyl-CoA synthetase [Dickeya dadantii 3937]
          Length = 888

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 23/221 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLNTLPTWIAGDSTEAVYIAEKIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              ++ +G +    + + V      +L     T        RV+ + V+  A+    + L
Sbjct: 531 PHKSEIQGVMLYLQNAQEVQLAAEAMLERVRHTNPQA----RVHGLLVQGMANRTGAMEL 586

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
            + V++ +     I   +GG++     ++    +    ++  +     V +     +   
Sbjct: 587 RIAVEQDAIFGPIIMLGEGGIEWS---RETQAAVALPPLNMALARYLIVQALKSGKIRSQ 643

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           + L+         L   +     D  ++S L+I+PL+   +
Sbjct: 644 IALKPLDIPAFSRLLVQVSNLILDCPEISRLDIHPLLASGD 684


>gi|168489475|ref|ZP_02713674.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP195]
 gi|183572108|gb|EDT92636.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP195]
 gi|332075717|gb|EGI86184.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA17570]
          Length = 420

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|72161706|ref|YP_289363.1| 6-carboxyhexanoate--COA ligase [Thermobifida fusca YX]
 gi|71915438|gb|AAZ55340.1| probable 6-carboxyhexanoate--COA ligase [Thermobifida fusca YX]
          Length = 692

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 71/232 (30%), Gaps = 21/232 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++EY AK LL +  VPV    +     AA  A + + GPL V         + +     L
Sbjct: 480 LNEYAAKRLLAEGGVPVVAETLAPDTEAALRAARDIDGPLVVKLVASGVTHKSELGLVRL 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              +       + L  V                       V    V +      E+ L  
Sbjct: 540 LDRADEAEAALADLARVAE----------------KENLTVEGYLVAERLS-GTEIILGA 582

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           + D  +     +    GG+  E  A                 +    V  + D    +  
Sbjct: 583 VRD-ETFGPVLMV-GAGGILAEHFADRVFLPCPAAPEHVRAALKQLAVYPVLDGARGRHH 640

Query: 183 ARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGR-LRVLDSKISFDDNA 232
                 D+   L + F     M+ +++NP+I+   G+    +D+ I     A
Sbjct: 641 DVDALVDVAVALSRVFAGSPWMTEIDLNPVIVGLKGQGATAVDAVIGIAPQA 692


>gi|306828276|ref|ZP_07461534.1| phosphoribosylamine-glycine ligase [Streptococcus pyogenes ATCC
           10782]
 gi|304429533|gb|EFM32584.1| phosphoribosylamine-glycine ligase [Streptococcus pyogenes ATCC
           10782]
          Length = 451

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP       S    A++ I+    P+ VVK+   A G+             
Sbjct: 137 AKEIMVKYNVPTGAYGTFSDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 182

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 183 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 220


>gi|297707849|ref|XP_002830698.1| PREDICTED: LOW QUALITY PROTEIN: trifunctional purine biosynthetic
           protein adenosine-3-like [Pongo abelii]
          Length = 1078

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 178 AKEFMERHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 224

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 225 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 262


>gi|148987779|ref|ZP_01819242.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP6-BS73]
 gi|147926243|gb|EDK77316.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP6-BS73]
          Length = 420

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|33863855|ref|NP_895415.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9313]
 gi|33635438|emb|CAE21763.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9313]
          Length = 448

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 97/276 (35%), Gaps = 35/276 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +++  VP   G   +++S  AA    K +  P+ ++K+    GGR           
Sbjct: 120 AKATMQQVGVPTVPGSEGLLASPEAAAELAKGMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+ ++   + +     L      +     G+    +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVTTPDQLEN-----LFKAAQGEAEAAFGNP--GLYMEKFIDRPRHVEVQILSD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       I   +    I+   +   ++     + P + +   E   +    +  +G   
Sbjct: 218 RHGN---VIHLGERDCSIQRRHQKLLEESPSPALTPELRLRMGEAAVAAARSINYEGAGT 274

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
           ++        +  F + +  +   +P+  M  G  L      I+  D    +  DIQ LR
Sbjct: 275 VEFLLDRKGDFY-FMEMNTRIQVEHPVTEMVTGIDLIAEQLHIAGGDPISIKQEDIQ-LR 332

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
             + E     E   HN       G I       G G
Sbjct: 333 GHAIECRINAEDSTHNFR--PSPGQITGWLPPGGPG 366


>gi|46108670|ref|XP_381393.1| hypothetical protein FG01217.1 [Gibberella zeae PH-1]
          Length = 1170

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 70/226 (30%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+AK + + +V  A  A +T+  P+ V  +    G                G  
Sbjct: 222 LEEINIPIAKSIAVGTVEEALEAAETVGYPIIVRAAYALGGL---------------GSG 266

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +     L  +               + VE      +EL   ++ D  +  +
Sbjct: 267 FANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKELEYEVVRDANNNCI 313

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 314 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVVGECN 366

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 367 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 411


>gi|222082575|ref|YP_002541940.1| acyl-CoA synthetase protein [Agrobacterium radiobacter K84]
 gi|221727254|gb|ACM30343.1| acyl-CoA synthetase protein [Agrobacterium radiobacter K84]
          Length = 677

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 81/228 (35%), Gaps = 33/228 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  AKA L  + + V  G   +S   A    + L  P+ +           K    E 
Sbjct: 471 LNEAVAKAELAAFGLTVPVGATAASPGEAAEQAERLGFPVAL-----------KALGVEH 519

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +++   V     +++V +    +            +G  +    +E       EL +  
Sbjct: 520 KSEAGAVVLNLRDMEAVRNAAHGM--------AHVASGYLIER-MIERPV---VELIVGA 567

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           + D   G+   + +  GG+ +E +       +    +D L  ++   V  L +    +G 
Sbjct: 568 VRDPALGLALTVGA--GGILVELLEDSVILALPVTRMDVLEAISRLKVRKLIE--GYRGG 623

Query: 183 ARIDGGDLFPNL-----YKAFCDKDMSLLEINPL-IIMKNGRLRVLDS 224
           AR +   +   +     Y       +  L+INPL ++  N  +   D+
Sbjct: 624 ARGNLDLVVDAVVSTAEYVVKHAARLEELDINPLMVLPGNRGVVAADA 671


>gi|52549843|gb|AAU83692.1| acetyl-CoA synthetase [uncultured archaeon GZfos32G12]
          Length = 233

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 89/229 (38%), Gaps = 24/229 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKAL+  + + V K V+I  +       K +  P  V+K           +    
Sbjct: 21  LFEPEAKALVSAWGIQVPKSVLIDGLEDVALKSKEI-IPPLVLKVV--------SQDILH 71

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +  G +      + V   ++E+    L   +  P  +R+    +E+ A    EL +  
Sbjct: 72  KREFGGVITGIKDSEEVSIALKEM---KLTLAEKAPK-ARIAGFLLEETAPTGIELIIGG 127

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L D   G      +    +++  +V+        + + D +  V S  +     +   +G
Sbjct: 128 LRDPQFGPAVMFGTGGFAVELVADVSFRLAPLNREEVFDMMQEVKSYPL-----LTGFRG 182

Query: 182 QARIDGGDLFPNLYKA----FCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
              +D   L   + K        +++  +EINPL++ + G +  +D+++
Sbjct: 183 SKPVDLAKLVSTVMKLSDILLEIEEIKEIEINPLMVHEEGAV-AVDARV 230


>gi|20906351|gb|AAM31524.1| Pyruvate carboxylase, subunit A [Methanosarcina mazei Go1]
          Length = 497

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 74/220 (33%), Gaps = 51/220 (23%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ K  VPV  G    +     A    + +  P+ +  S   AGG G          
Sbjct: 123 ARHLMMKAGVPVVPGTKDAVEDPEEAMEIAEKIGYPVLIKAS---AGGGGI--------- 170

Query: 66  SKGGVRVESSLKSVI---SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              G++V  S + +    S  R++ GS              + V++E   +  R + + +
Sbjct: 171 ---GMKVVHSREELATSLSSTRQMAGSAFGD----------SSVFIEKYVEEPRHIEIQI 217

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-----TSEDVASLCDML 177
           L D  S       S     D E   +   QK+ +    P++         E    +   +
Sbjct: 218 LAD--SHGNMVYLS-----DRECSIQRRHQKLIEEAPSPIMTPELRKQMGEAAVKVAKAI 270

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  ++           +   +   LE+N  + +++G
Sbjct: 271 GYVNAGTVEF---------LYSKGNFYFLEVNTRLQVEHG 301


>gi|219849134|ref|YP_002463567.1| phosphoribosylglycinamide synthetase [Chloroflexus aggregans DSM
           9485]
 gi|219543393|gb|ACL25131.1| phosphoribosylglycinamide synthetase [Chloroflexus aggregans DSM
           9485]
          Length = 418

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 20/105 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L  +  VP     + ++     +  +++P P  V               K L  +   
Sbjct: 115 RQLFARAGVPSPAFRLCTTADDLTTVAQSIPFPCVV---------------KPLRLNGSR 159

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV    +    ++  R +  + L+ +  GP   R +   VE+   
Sbjct: 160 GVIRADNPDQFVAATRRL--TALLDRVEGP---RTHEFLVEEFVP 199


>gi|19570349|dbj|BAB86294.1| feruloyl-CoA synthetase [Sphingomonas paucimobilis]
 gi|32698484|dbj|BAC79255.1| feruloyl-CoA synthetase [Sphingomonas paucimobilis]
          Length = 709

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 20/229 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKELP 63
           EY+AKALL    +   KG   ++V  A +A + + GP+ V+K+Q  A   +       L 
Sbjct: 497 EYKAKALLAPLGISFPKGQFAATVEDAIAAAEAIGGPV-VMKAQAAALSHKSDAGGVALN 555

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                 +R                       +       ++ V +E       EL +   
Sbjct: 556 LVGAEAIRAAWD-------------KMFADVKRYDASIILDGVLIEAMGARGLELIVGAK 602

Query: 124 VDRTSGMVAFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            D        +A   G   +I +  +     + K  I   +G   +  A L         
Sbjct: 603 NDPQ-WGPVILAGFGGVTAEILQDVRLLSPDMTKEAIVAELG-KLKQAALLHGYRGSPAL 660

Query: 183 ARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGR-LRVLDSKISFD 229
                 +L   + +    +  +  L++NP+++   G+    LD+ +  D
Sbjct: 661 DVGAVAELIGQVGRLLRGEPRIQELDLNPVVVYPEGQGAIALDALMLVD 709


>gi|295694747|ref|YP_003587985.1| cyanophycin synthetase [Bacillus tusciae DSM 2912]
 gi|295410349|gb|ADG04841.1| cyanophycin synthetase [Bacillus tusciae DSM 2912]
          Length = 891

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 11/78 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA+L++  VPV  G    S   A    + +  P+ V K  +H     +GR   +  +++G
Sbjct: 219 KAVLKEAGVPVPDGGTALSEEEAARIARDVGLPVTV-KP-VHGN---QGRGVSVRVNTEG 273

Query: 69  GVRVESSLKSVISDIREI 86
            VR             EI
Sbjct: 274 EVR------EAYRRAAEI 285


>gi|284992168|ref|YP_003410722.1| CoA-binding domain-containing protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284065413|gb|ADB76351.1| CoA-binding domain protein [Geodermatophilus obscurus DSM 43160]
          Length = 714

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 69/221 (31%), Gaps = 31/221 (14%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
              ALLR   +      +++S  AA  A+  LPG           G              
Sbjct: 496 DGAALLRSIGIGQPASTLVTSPEAAREAVAALPGR----------GVLKLAAADLAHKSE 545

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGVRV            E+L +       G     V  V+V++      EL L++   R
Sbjct: 546 VGGVRVGVGPDEAAGVFAELLDAARRHHVPG-----VEGVHVQELVPPGTELILAVTAGR 600

Query: 127 TSGMVAFIASTQGGMDIEEV-------AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
                       GG+  E         A   P++ + +    L G+ +     L      
Sbjct: 601 DGFPPVVTVGL-GGVTTELYRDLASALAPVSPEEAWAM----LRGLRA--WPLLAGFRGA 653

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGR 218
           +        D    L +A       L   E+NPLI+   GR
Sbjct: 654 EPADVPAAVDAVVRLSQAAVAAGDRLAEFEVNPLIVAPRGR 694


>gi|139472913|ref|YP_001127628.1| phosphoribosylamine--glycine ligase [Streptococcus pyogenes str.
           Manfredo]
 gi|134271159|emb|CAM29371.1| phosphoribosylamine-glycine ligase [Streptococcus pyogenes str.
           Manfredo]
          Length = 421

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYNVP A          A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYNVPTAAYGTFLDFEKAKAYIEEQGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +   +E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAQEML----LDNKFGDSGARV---VIEEFLD 190


>gi|15902096|ref|NP_357646.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae R6]
 gi|116517132|ref|YP_815502.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae D39]
 gi|73621424|sp|Q8DRM0|PUR2_STRR6 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|15457584|gb|AAK98856.1| Phosphoribosylglycinamide synthetase [Streptococcus pneumoniae R6]
 gi|116077708|gb|ABJ55428.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae D39]
          Length = 420

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|323097773|emb|CBJ18448.1| ATP citrate lyase [uncultured bacterium]
          Length = 110

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREKDASG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGA 362
           +G ++ I G I     + K   GI+ A +  +  +  V     +R  G 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKAVDTKIYVRRGGP 109


>gi|291523220|emb|CBK81513.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Coprococcus
           catus GD/7]
          Length = 375

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 61/216 (28%), Gaps = 55/216 (25%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y  K  L  + +PV       S             P+ ++K+    G  GKG        
Sbjct: 102 YDQKQWLMSHGLPVPDFRKADSYEKLVEDCDYFGYPV-ILKT-CTGGYDGKGN------- 152

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 V  + + +      +    L              + VE+    L+E  +S+LV 
Sbjct: 153 -----AVIHTREDIREAYESLGAGRLP-------------LMVEEYVPFLKE--VSILVC 192

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           R++     +      + +  +  +       +  D                       R 
Sbjct: 193 RSTNGDVAVFPVAENVHVNSILDET-----TVPADITE------------------ACRE 229

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           +  D+      AF    M  +E   L + K+  + V
Sbjct: 230 EAMDVARKAVHAFNAYGMLCIE---LFVTKDQHVLV 262


>gi|288931391|ref|YP_003435451.1| phosphoribosylamine/glycine ligase [Ferroglobus placidus DSM 10642]
 gi|288893639|gb|ADC65176.1| phosphoribosylamine/glycine ligase [Ferroglobus placidus DSM 10642]
          Length = 476

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 25/110 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGKGRFKELP 63
           AK  +RK  VP+ +         A+  +K      PG   VVK+   A G+         
Sbjct: 112 AKDFMRKIGVPIPEYWNFDDADEAKEFVKDYYKNNPGKNLVVKADGLAAGK--------- 162

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                GV V  SL+  +  + EI    ++ K+ G  G+RV    +E+   
Sbjct: 163 -----GVFVCDSLEEALFAVDEI----MVRKRFGEAGNRVE---IEERLY 200


>gi|308161552|gb|EFO63993.1| Acyl-CoA synthetase [Giardia lamblia P15]
          Length = 902

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 77/267 (28%), Gaps = 49/267 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVI-SSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFK 60
           ++EY+A  L +   + V +          A      + P   YVVK  I           
Sbjct: 35  LYEYEAYELFKLIGIKVPEFRYFPLHPSLASQIKTFMKPNQKYVVKCHIPG--------- 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---- 116
            L     GG+ +     ++ +D+   +            G  +  V V + A        
Sbjct: 86  CLHKTDIGGIMLFKDRSNIEADLEPFVNKL------KSAGHNLEGVIVVEMAKFYDSGMS 139

Query: 117 --ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-VASL 173
             EL +S+  D +S          GG  IE       Q +  + +   + +       + 
Sbjct: 140 NGELLISVFED-SSFGPCLCFGL-GGTAIEYYGDVMKQSMSTVFLPVFLNLKESKPALAA 197

Query: 174 CDMLELQGQ----------ARIDGGDLFPNLYKAFC------------DKDMSLLEINPL 211
            + L +                   D+   L                    ++  EINP 
Sbjct: 198 IERLPVTQFLLGEVRGSKAQVRSFKDIVNPLANLAECVRYYSRFNPKSRYVVTECEINPT 257

Query: 212 IIMK-NGRLRVLDSKISFDDNALYRHL 237
           ++ K  G L  LD  +    N  +   
Sbjct: 258 VVEKGTGSLLALDGVVRVAVNPNFGKP 284


>gi|257057336|ref|YP_003135168.1| acetyl/propionyl-CoA carboxylase, alpha subunit [Saccharomonospora
           viridis DSM 43017]
 gi|256587208|gb|ACU98341.1| acetyl/propionyl-CoA carboxylase, alpha subunit [Saccharomonospora
           viridis DSM 43017]
          Length = 467

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           QA++LL +  VP+  G +  + +   A +    +  P  ++K+    GGRG
Sbjct: 127 QARSLLAEAGVPLLPGSLGTVDNAAEAVALASEIGFP-LIIKAVAGGGGRG 176


>gi|229828830|ref|ZP_04454899.1| hypothetical protein GCWU000342_00915 [Shuttleworthia satelles DSM
           14600]
 gi|229791993|gb|EEP28107.1| hypothetical protein GCWU000342_00915 [Shuttleworthia satelles DSM
           14600]
          Length = 1071

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 60/204 (29%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +P A G  + +   A+     +  P+ V  S +  G                G
Sbjct: 674 EILQKTGIPRASGGTVYTAKEAKEVANRIGYPVLVRPSYVLGG---------------QG 718

Query: 70  VRVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +++  + + +   I     I     I       G  +    + DG +IL           
Sbjct: 719 MQIAFNDEEIEDFIGIINRIAQDHPILVDKYLQGKEIEVDAICDGDNIL----------- 767

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               +  I        I             +       +       L   L ++G   I 
Sbjct: 768 ----IPGIMEHIERTGIHSGDSISVYPAHTISDSVKKKLEDY-TERLAMALHVKGMINIQ 822

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
             ++         D+D+ ++E+NP
Sbjct: 823 FINI---------DEDVYVIEVNP 837


>gi|300712376|ref|YP_003738190.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3]
 gi|299126059|gb|ADJ16398.1| acetyl-CoA synthetase [Halalkalicoccus jeotgali B3]
          Length = 695

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 16/213 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  +L  Y +P+ +  V+S    AE   +++ G   +                 +    
Sbjct: 485 EAMGILDAYGIPIPEREVVSDPVEAERVAESIDGEAVM----------KIVSPDIMHKSD 534

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV+V      V     +++       +     + +  V +++  D+ R +   +  +R
Sbjct: 535 IGGVKVGVPESEVYDAYEDLVAR----ARNYQPDATLLGVQIQEMVDLDRGVETIVGTNR 590

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  +    GG+ +E +     +       +    +   D A L       +     
Sbjct: 591 DPQFGPLLLFGLGGIFVETLEDVTVRIAPVSESEATEMIDGIDAAPLLRGARGREPVDET 650

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNG 217
              +    L +   D  ++  L+INPL++   G
Sbjct: 651 AITETIGRLSQLVTDFPEIVELDINPLVVTPEG 683


>gi|317133556|ref|YP_004092870.1| acetyl-CoA carboxylase, biotin carboxylase [Ethanoligenens
           harbinense YUAN-3]
 gi|315471535|gb|ADU28139.1| acetyl-CoA carboxylase, biotin carboxylase [Ethanoligenens
           harbinense YUAN-3]
          Length = 458

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K  VPV  G   +I S+  A      +  P+ V K+    GGRG          
Sbjct: 119 ARETMQKAGVPVVPGSDGLIESLEDARKVADAIGYPVMV-KATAGGGGRG---------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               V     ++  I+  R   G++   +        ++  +VE
Sbjct: 168 -IREVHTPDEMEDAIAAARGEAGASFGNEGVYLEKYIIDPHHVE 210


>gi|261367508|ref|ZP_05980391.1| phosphoribosylamine--glycine ligase [Subdoligranulum variabile DSM
           15176]
 gi|282570289|gb|EFB75824.1| phosphoribosylamine--glycine ligase [Subdoligranulum variabile DSM
           15176]
          Length = 428

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V        + ++       V+K+   A G+             
Sbjct: 106 SKNLMQKYGIPTADYAVFDDPAKVIAYVEEKNKYPVVIKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + + V   ++EI    ++ K+ G +G   N V VE+  
Sbjct: 153 -GVLICQNHEDVTEAVKEI----MLDKKFGASG---NHVVVEEFL 189


>gi|126657548|ref|ZP_01728704.1| hypothetical protein CY0110_29859 [Cyanothece sp. CCY0110]
 gi|126621252|gb|EAZ91965.1| hypothetical protein CY0110_29859 [Cyanothece sp. CCY0110]
          Length = 872

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 13/122 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   VPV KG  I      ESAI  + G   V+K      GRG         +++ 
Sbjct: 224 KTILQDAGVPVPKGTTIQFFEELESAIDDVGGYPIVIKPLDGNHGRGITIDINSTKEAEE 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-------------NCVYVEDGADIL 115
              + S      S I E        +     G  V             +   +E+  +I 
Sbjct: 284 AYDLASEESKTRSVIVERFYKGSDHRLLVINGKLVAVAERVPAHVVGDDKHTIEELIEIT 343

Query: 116 RE 117
            E
Sbjct: 344 NE 345


>gi|332158139|ref|YP_004423418.1| carbamoyl phosphate synthase large subunit [Pyrococcus sp. NA2]
 gi|331033602|gb|AEC51414.1| carbamoyl phosphate synthase large subunit [Pyrococcus sp. NA2]
          Length = 1059

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 33/197 (16%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           K  +P+       SV  A    + +  P+ +V+   + GGRG                V 
Sbjct: 133 KAGLPIPPSGAAKSVEEAIEIAEKIGFPV-IVRVSFNLGGRGSF--------------VA 177

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            + +   + I      +            +  V VE      +E+   ++ D+  G    
Sbjct: 178 WNREEFENYIIRAFAQS-----------EIGKVLVEKYLYHWKEIEFEVVRDKK-GNAVA 225

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPN 193
           +A       +E            ++I P   +T+ +   L +      +A    G+    
Sbjct: 226 VAC------LENFDPMGVHTGDSIVIAPCQTLTNREYQMLRNAAIKVAEAIDLIGECNVQ 279

Query: 194 LYKAFCDKDMSLLEINP 210
           L      ++  ++E NP
Sbjct: 280 LALNPKSEEFYVIETNP 296


>gi|258654962|ref|YP_003204118.1| cyanophycin synthetase [Nakamurella multipartita DSM 44233]
 gi|258558187|gb|ACV81129.1| cyanophycin synthetase [Nakamurella multipartita DSM 44233]
          Length = 914

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 9/94 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    +PV    V+     A    + +  P+ VVK      GRG      +    +  
Sbjct: 242 RLLAAAGLPVPASEVVRRADDAVRIARRIGYPV-VVKPLDGNHGRG----VAINLQDEAA 296

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           VR            R   G  L+         RV
Sbjct: 297 VRAAF--DEAYDQSRR--GYVLVESYIAGKDYRV 326


>gi|227546801|ref|ZP_03976850.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing)
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|227212763|gb|EEI80644.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing)
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|291516174|emb|CBK69790.1| carbamoyl-phosphate synthase large subunit [Bifidobacterium longum
           subsp. longum F8]
          Length = 1127

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 27/201 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  GGRG              
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVL-GGRGM-EIVYDDKQLNKY 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    +     + +   L S L+  +       ++     D      ELY+  +++    
Sbjct: 740 VDRALTEAKADTVVSGRLPSPLLIDKFLQDAIEIDV----DALFDGEELYIGGIMEH--- 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                        +EE           L   P   ++ + +  L +       A+     
Sbjct: 793 -------------VEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCHVQ 834

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  AF    + ++E NP
Sbjct: 835 GLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|171184619|ref|YP_001793538.1| carbamoyl phosphate synthase large subunit [Thermoproteus
           neutrophilus V24Sta]
 gi|170933831|gb|ACB39092.1| carbamoyl-phosphate synthase, large subunit [Thermoproteus
           neutrophilus V24Sta]
          Length = 1025

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 14/91 (15%)

Query: 8   AKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           ++ L +K      +P+       S   A    + +  P+ V   ++     G G F    
Sbjct: 125 SRDLFQKAMREVGIPIPPSSPARSPEEALKVAREIGYPVVV---RVSFNLGGAGAFVARS 181

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITK 94
            +               +  +  +G  L+ K
Sbjct: 182 EEDLRARVY-------KAFAQSAIGEVLVEK 205



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 14/43 (32%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +         S   A    + L  P+ V  S +  G
Sbjct: 662 ELLEKLGIKQPPWFAARSPEEAAKLAEALGYPVLVRPSYVLGG 704


>gi|154496701|ref|ZP_02035397.1| hypothetical protein BACCAP_00993 [Bacteroides capillosus ATCC
           29799]
 gi|150273953|gb|EDN01053.1| hypothetical protein BACCAP_00993 [Bacteroides capillosus ATCC
           29799]
          Length = 1098

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P AKG  + +   A +A K L  P+ V  S +  G                G
Sbjct: 705 EILEQCGIPRAKGRTVFTTEEALTAAKELGYPVLVRPSYVLGG---------------QG 749

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +  S K++I  ++ I+  T+           +      DG     ++ L  +++    
Sbjct: 750 MEIAYSDKNIIDFMK-IINMTVQEHPILVDKYLMGRELEVDGVFDGEDILLPGIMEHVER 808

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                     G  I      + +   K +I             +   L + G        
Sbjct: 809 SGV-----HSGDSIAVYPPLHLEDKHKDMI-------LRYTRDMAKHLGVIG-------- 848

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
           L    Y  + D ++ ++E+NP
Sbjct: 849 LINAQYILYND-EIYVIEVNP 868


>gi|87198198|ref|YP_495455.1| phosphoribosylamine--glycine ligase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133879|gb|ABD24621.1| phosphoribosylamine--glycine ligase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 429

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 26/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  + ++P A  V   S+  A +A+     P+ V+K+   A G+              
Sbjct: 107 KDLCARADIPTAGYVRAKSLEEARAALAEFGAPV-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++   + + ++          G  G+ V    VE+        + +L      
Sbjct: 152 GVVVAMTMEEAEAAVDDMFD-----GAFGSAGAEV---VVEEFLTGEEASFFALT---DG 200

Query: 129 GMVAFIASTQG 139
             +   AS Q 
Sbjct: 201 ATIVPFASAQD 211


>gi|254571845|ref|XP_002493032.1| Large subunit of carbamoyl phosphate synthetase [Pichia pastoris
           GS115]
 gi|238032830|emb|CAY70853.1| Large subunit of carbamoyl phosphate synthetase [Pichia pastoris
           GS115]
 gi|328352958|emb|CCA39356.1| carbamoyl-phosphate synthase large subunit [Pichia pastoris CBS
           7435]
          Length = 1143

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 70/221 (31%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + ++++  A  A +++  P+ V  +    G                G  
Sbjct: 189 LNEINIPIAESIAVNTIDEALDAAESVGYPIIVRSAYALGGL---------------GSG 233

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 234 FANNKEELKNLASQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 280

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 281 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECN 333

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L Y+   + +  L   + L     G      +
Sbjct: 334 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 373


>gi|78358248|ref|YP_389697.1| acetyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. G20]
 gi|78220653|gb|ABB40002.1| acetyltransferase, GNAT family [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 911

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 34/229 (14%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG-KGRFKELPADSKGG 69
           +L+ Y + + +   +  VHAA  A + +  P+  +K +     R        L  +S G 
Sbjct: 499 ILKAYGINIPETRTVPDVHAAVRAAEEMGYPV-ALKVESPDIRRKTLAGGVALDLESDGD 557

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC---------VYVEDGADILRELYL 120
           V          S + + L + +   +   TG  V           + VE   D +     
Sbjct: 558 VL------EAASAMMQRLKTQMPAARI--TGYTVQRMCRRATALELMVETATDPV----F 605

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
             +V    G     A      D+          + +  +       +   A L D     
Sbjct: 606 GPVVRFGQGG----AGADLAQDVSTALPPLNMNLAREAVS-----RTRVAARLHDAAGRP 656

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                    +   + +   D  ++  +EINPL   ++G +  LD+ +  
Sbjct: 657 LVDVDAVHLVLVKVSQLIIDIPEIFEMEINPLFADEDG-VVALDAHVRI 704



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 56/172 (32%), Gaps = 34/172 (19%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IGCMVNGAGLAMATMDIIKLYGGAP 293
           R  DI  L D  E  +R             L G+ +  + NG G      D +   GG  
Sbjct: 279 RVFDIDSLFDTVETLARAA----------PLKGDRLAILTNGGGPGFLATDALLAGGGRL 328

Query: 294 A---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI 332
           A                     N L +  GAD D  A   K++  D S+  +L+     I
Sbjct: 329 AELSEETCQTLDNELKGDWSYWNPLVIKSGADADMYARTLKVLLDDKSLDAVLVMHVPSI 388

Query: 333 MR-CDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAID 383
                 + +G++ A +  K  + L   L   +         ++GL      D
Sbjct: 389 YADSGQVAEGVVRACRRTKKAV-LTSWLGIDDAAGARSTFRKAGLPSFFTPD 439


>gi|239607851|gb|EEQ84838.1| carbamoyl-phosphate synthase large subunit [Ajellomyces
           dermatitidis ER-3]
 gi|327355792|gb|EGE84649.1| carbamoyl-phosphate synthase subunit arginine-specific large
           [Ajellomyces dermatitidis ATCC 18188]
          Length = 1182

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ V ++SV  A  A + +  P+ V  +    G               
Sbjct: 231 SKAL-NEINIPIAESVAVNSVDEALEAAEKIGYPIIVRSAYALGGL-------------- 275

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 276 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 321

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 322 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 374

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 375 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 423


>gi|261198318|ref|XP_002625561.1| carbamoyl-phosphate synthase large subunit [Ajellomyces
           dermatitidis SLH14081]
 gi|239595524|gb|EEQ78105.1| carbamoyl-phosphate synthase large subunit [Ajellomyces
           dermatitidis SLH14081]
          Length = 1182

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ V ++SV  A  A + +  P+ V  +    G               
Sbjct: 231 SKAL-NEINIPIAESVAVNSVDEALEAAEKIGYPIIVRSAYALGGL-------------- 275

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 276 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 321

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 322 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 374

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 375 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 423


>gi|33598707|ref|NP_886350.1| acetyl-CoA synthetase [Bordetella parapertussis 12822]
 gi|33574837|emb|CAE39499.1| acetyl-CoA synthetase [Bordetella parapertussis]
          Length = 729

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 29/233 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGR 58
           M   E +AK L+R   +      +      A +    L  P+   +V  +I         
Sbjct: 493 MQYSETEAKRLVRSIGIQTLPERIAQDPAQAAAIATELGFPVALKIVSPEIL-------- 544

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                +D  G      +     S    ++    + +       R++ + +   A    +L
Sbjct: 545 ---HKSDVGGVQLAVQTADEARSVYTSMMAR--VRRNCPQA--RIDGIAIAPMARPGVDL 597

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG------VTSEDVAS 172
            L  + D T G    + S   G+  E +A      I +   D          +    +  
Sbjct: 598 ILGCIQDPTFGPCLMLGS--DGVYTEILADAV---IRRAPFDAATARSMIAQLKGAPLLD 652

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
               +       +       ++Y     + +  LEINPL ++  G+ +  LD+
Sbjct: 653 GARGMPRADTDALAQAVALLSVYAHANRRHIESLEINPLRVLPAGQGVVALDA 705


>gi|86153906|ref|ZP_01072109.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|121612525|ref|YP_999993.1| carbamoyl phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167004949|ref|ZP_02270707.1| carbamoyl phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|85842867|gb|EAQ60079.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87250448|gb|EAQ73406.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 81-176]
          Length = 1089

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A   +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAADEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|253702113|ref|YP_003023302.1| phosphoribosylamine--glycine ligase [Geobacter sp. M21]
 gi|251776963|gb|ACT19544.1| phosphoribosylamine/glycine ligase [Geobacter sp. M21]
          Length = 423

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KYNVP A   V + V  A S I     P+ V+K+   A G+             
Sbjct: 106 SKDLMHKYNVPTAAYGVFTEVKPAVSFIDETGIPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +    ++ + ++L         G  G   + V +E+        +L+      
Sbjct: 152 -GVIIAQTRDEAVAAVTDML----SGNAFGAAG---SRVVIEEFLKGEEASFLAFT---D 200

Query: 128 SGMVAFIASTQG 139
              +  +AS Q 
Sbjct: 201 GERIIPLASAQD 212


>gi|148996456|ref|ZP_01824174.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP11-BS70]
 gi|168576914|ref|ZP_02722756.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           MLV-016]
 gi|194398590|ref|YP_002036772.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae G54]
 gi|307066730|ref|YP_003875696.1| phosphoribosylamine-glycine ligase [Streptococcus pneumoniae AP200]
 gi|147757031|gb|EDK64070.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP11-BS70]
 gi|183577395|gb|EDT97923.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           MLV-016]
 gi|194358257|gb|ACF56705.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae G54]
 gi|306408267|gb|ADM83694.1| Phosphoribosylamine-glycine ligase [Streptococcus pneumoniae AP200]
 gi|332201978|gb|EGJ16047.1| phosphoribosylglycinamide synthetase [Streptococcus pneumoniae
           GA41317]
          Length = 420

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 47/285 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +    E+L    +  + G +G+RV    +E+  +       SL     
Sbjct: 153 -GVVVSETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLEGEE---FSLFAFVN 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K   D   G  +  + +   +  L        
Sbjct: 202 GDKFYIMPTAQD---------------HKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTA 246

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            D      L     +    L +    LI+  +G ++   +++   D         +    
Sbjct: 247 VDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFG-DPETQIILPRLTS-- 303

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKL 288
           D ++  +  +++K+ N+ +      +G +V   G  +     ++L
Sbjct: 304 DFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVEL 348


>gi|37523895|ref|NP_927272.1| cyanophycin synthetase [Gloeobacter violaceus PCC 7421]
 gi|35214901|dbj|BAC92267.1| cyanophycin synthetase [Gloeobacter violaceus PCC 7421]
          Length = 876

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    +PV +G  +  +   E AI+ L G   V+K             K +  D + 
Sbjct: 222 KGMLASVGIPVPRGTTVRRLADLEEAIEELGGYPVVLKP------LDANHGKGITVDVRD 275

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY-VEDGAD 113
               +S+  +     +E++    IT +        + V  V +   
Sbjct: 276 LKTAQSAYDAAREFSKEVIVEQYITGKDYRILVINHQVVAVAERVP 321


>gi|323097775|emb|CBJ18449.1| ATP citrate lyase [uncultured bacterium]
          Length = 110

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 16/109 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLFDLMTREPDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEV-----KINIPLVMRLEGA 362
           +G ++ I G I     + K   GI+ A +       +++  + +R  G 
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQDKLKEVDTKIYVRRGGP 109


>gi|302654151|ref|XP_003018886.1| hypothetical protein TRV_07078 [Trichophyton verrucosum HKI 0517]
 gi|291182570|gb|EFE38241.1| hypothetical protein TRV_07078 [Trichophyton verrucosum HKI 0517]
          Length = 1056

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + +SSV  A +A   +  P+ V  +    G                G  
Sbjct: 104 LNEINIPIAESIAVSSVDDALAAADKIGYPIIVRSAYALGGL---------------GSG 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+   +       L             +    + VE      +E+   ++ D ++  +
Sbjct: 149 FASTPDELRDLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDASNNCI 195

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 196 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 248

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 249 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 293


>gi|134300074|ref|YP_001113570.1| carbamoyl phosphate synthase large subunit [Desulfotomaculum
           reducens MI-1]
 gi|134052774|gb|ABO50745.1| carbamoyl-phosphate synthase large subunit [Desulfotomaculum
           reducens MI-1]
          Length = 1079

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + +     SV  AE   + L  P+ +  +    G                
Sbjct: 133 KETMSRLGIEMPRSQAAYSVEEAEKIAQELGYPVVIRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + +     + S++           V  + VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNVEELRTIANRGIASSM-----------VGQILVEESVLGWEELELEVVRDSKN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 QMITV 231



 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++K  +P+ +  +  ++  A    K +  PL V  S +  GGRG
Sbjct: 674 MQKLGIPMPESGMAVNIEEAIDISKKIGYPLMVRPSYVL-GGRG 716


>gi|159902609|ref|YP_001549953.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9211]
 gi|159887785|gb|ABX07999.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9211]
          Length = 448

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 95/277 (34%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+ + K  VP   G   ++SS   A      +  P+ ++K+    GGRG  R    P  
Sbjct: 120 AKSTMMKVGVPTVPGTDGLLSSSEEAAFLASEMGYPV-MIKATAGGGGRGM-RLVNGPDS 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +   +                         G  G     +Y+E   D  R + + +L D
Sbjct: 178 IEDLFKAAQGEAEAA---------------FGNPG-----LYMEKFIDRPRHVEVQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +D  + +   E   S    ++ +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEESPSPALDSQLRIKMGEAAVSAAKSIKYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D   N Y  F + +  +   +P+  M  G  L     +I+  D+  ++  +IQ L
Sbjct: 275 VEFLLDRQGNFY--FMEMNTRIQVEHPVTEMVTGVDLIAEQLRIAGGDSISFQQDEIQ-L 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
           R  + E     E   HN       G I       G G
Sbjct: 332 RGHAIECRINAEDSTHNFR--PSPGRITGWLPPGGPG 366


>gi|258592379|emb|CBE68688.1| Phosphoribosylamine--glycine ligase (GARS) (Glycinamide
           ribonucleotide synthetase) (Phosphoribosylglycinamide
           synthetase) [NC10 bacterium 'Dutch sediment']
          Length = 425

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+ ++K+++P            A+  IK +  P  VVK+   A G+             
Sbjct: 106 AKSFMKKHHIPTGFFQTFDRPDEAKRYIKEIGAP-LVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V   L   +  + +I+   L     G  G     + VE+  +   E+    L D  
Sbjct: 152 -GVIVCFELAEALDAVEKIMEERLF----GDAG---ERIVVEEYLE-GEEISFHALTDGD 202

Query: 128 SGMVAFIASTQG 139
           + +   +AS+Q 
Sbjct: 203 AVLP--LASSQD 212


>gi|332654271|ref|ZP_08420015.1| carbamoyl-phosphate synthase, large subunit [Ruminococcaceae
           bacterium D16]
 gi|332517357|gb|EGJ46962.1| carbamoyl-phosphate synthase, large subunit [Ruminococcaceae
           bacterium D16]
          Length = 1069

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 37/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P AKG  + +   A  A   L  P+ V  S +  G                G
Sbjct: 676 EILEKCGIPRAKGRTVYTTQEALKAANELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +  S +++   ++ I+  T+           +      DG     ++ +  +++    
Sbjct: 721 MEIAYSDRNIEEFMK-IINMTVQEHPILIDKYLMGRELEVDGVFDGEDILIPGIMEHVER 779

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                A    G  I        +   + LI        +   ++   L + G        
Sbjct: 780 -----AGVHSGDSIAVYPPINLEDKHRELI-------LKHTKNMAKHLGVIG-------- 819

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
           L    Y  + D D+ ++E+NP
Sbjct: 820 LINAQYILYND-DIYVIEVNP 839


>gi|288958826|ref|YP_003449167.1| phosphoribosylamine--glycine ligase [Azospirillum sp. B510]
 gi|288911134|dbj|BAI72623.1| phosphoribosylamine--glycine ligase [Azospirillum sp. B510]
          Length = 428

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L KY VP A         AA++ ++    P+ VVK+   A G+              
Sbjct: 107 KDILAKYGVPTAFYERFKDPDAAKAYVRKHGAPI-VVKTDGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  S +     I + L    +  + G  G+ V    VE+  D   E+    L D  +
Sbjct: 152 GVTVARSEREAFEAIDDAL----VGGRFGAAGAEV---VVEEFLD-GEEVSFFALCDGEN 203

Query: 129 GMVAFIASTQG 139
            +   +AS Q 
Sbjct: 204 ALP--LASAQD 212


>gi|39945042|ref|XP_362058.1| hypothetical protein MGG_04503 [Magnaporthe oryzae 70-15]
 gi|145011390|gb|EDJ96046.1| hypothetical protein MGG_04503 [Magnaporthe oryzae 70-15]
          Length = 1179

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 73/238 (30%), Gaps = 50/238 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N+P+AK + ++SV  A  A + +  P+ V  +    G            
Sbjct: 216 RDLFARALDEINIPIAKSIAVNSVDEALDAAEKVGYPIIVRAAYALGGL----------- 264

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + +       L  +               + VE      +E+   ++ 
Sbjct: 265 ----GSGFANNREELKQMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVR 307

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D  +  +          ++E            +++ P   ++ E+          +   L
Sbjct: 308 DAENNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHL 360

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISFDDNAL 233
            + G+  +        L Y+   + +  L   + L     G       +KI    NAL
Sbjct: 361 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL-GNAL 416


>gi|325003226|ref|ZP_08124338.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Pseudonocardia sp. P1]
          Length = 667

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESA-----IKTLPGPLYVVKSQIHAGGRG 55
           AK L+ K  VPV  G  +      ++A        +  PL V K+    GGRG
Sbjct: 120 AKELMEKAGVPVLPGATVDDAEEVDAATVAAMADGIGYPLLV-KAAYGGGGRG 171


>gi|261416261|ref|YP_003249944.1| phosphoribosylamine/glycine ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372717|gb|ACX75462.1| phosphoribosylamine/glycine ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327273|gb|ADL26474.1| phosphoribosylamine--glycine ligase [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 430

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +++KY VP A     + + +A+  +   P P+ VVK+   A G+             
Sbjct: 106 SKDIMKKYGVPTAAFETFTDLASAKKFLAEHPAPI-VVKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G  V  + K     + E+LG   +  ++G        V +E+  D       S+ V   
Sbjct: 152 -GAIVCMTDKEANDAVEEMLGDKAVFGESG------KTVVIEEFMDGEE---ASIFVVCD 201

Query: 128 SGMVAFIASTQG 139
                 ++S Q 
Sbjct: 202 GKDYVILSSAQD 213


>gi|332701424|ref|ZP_08421512.1| Phosphoribosylamine--glycine ligase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551573|gb|EGJ48617.1| Phosphoribosylamine--glycine ligase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 425

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 25/136 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R+  VP A   +   V AA   ++   GP+ VVK+   A G+             
Sbjct: 106 AKTVMREAGVPTAGFAMFQDVKAAREFVRDRGGPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++     + E+L    +  + G  G   + V VED  +     +L+      
Sbjct: 152 -GVAVCHTVECAEQALEEML----VANRFGGAG---SKVLVEDLLEGEEASFLAFC---D 200

Query: 128 SGMVAFIASTQGGMDI 143
              VA + S+Q    I
Sbjct: 201 GERVALMPSSQDHKAI 216


>gi|332158036|ref|YP_004423315.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus sp.
           NA2]
 gi|331033499|gb|AEC51311.1| succinyl-coa synthetase alpha chain related protein [Pyrococcus sp.
           NA2]
          Length = 487

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 82/234 (35%), Gaps = 43/234 (18%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRVLDSKI-----------SFDDNALYRHLDIQELRDVS 246
           F +    + +I P+I +K+GR     +K                +A+++   I    D  
Sbjct: 252 FMETAKRVTKIKPVIALKSGRSE-YGAKAASSHTGSLAGQDVIYDAVFKQTGIIRAEDF- 309

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA------------ 294
             +     AK      +     IG + +G G  +   D +  +G   A            
Sbjct: 310 --EHMFDLAKAFAKCKLPKGDRIGIITDGGGAGVMASDAVAKFGLKLAELSEDTIRFLRE 367

Query: 295 ---------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSA 345
                    N  DV G  D ++   A +  T D +V  IL+ +   +   +      + +
Sbjct: 368 RFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIVLFQVPLLNEEEVIEIIS 427

Query: 346 VKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
               K + P+V + + G   D   R++ E G+ V          ++ V A+ G+
Sbjct: 428 EYARKSDKPIVAVSMGGYKTDKFARMLEERGVPVYPTP------ERGVRALAGL 475


>gi|307151127|ref|YP_003886511.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306981355|gb|ADN13236.1| CoA-binding domain protein [Cyanothece sp. PCC 7822]
          Length = 912

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 10/81 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K +L  Y +P+ +     +   A    +++  P+ +                  
Sbjct: 508 LTESESKQILGAYGIPIVRTATAKTEDEAVDFAESIGYPVVI----------KLYSKTIT 557

Query: 63  PADSKGGVRVESSLKSVISDI 83
                GGV++  + +  +   
Sbjct: 558 HKTDVGGVQLNLTDEEAVRWA 578



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 31/183 (16%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLY 289
           +A +R   + E+  +SE       A+          G  +  + N  G  +   D +   
Sbjct: 284 DAAFRRCGVLEVNRISE---MFDMAELLGKQSRLPKGPRLTIVTNAGGPGVLATDALINT 340

Query: 290 GGA----------------PANF-----LDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           GG                 PAN+     +D+ G A  ++   AF II  D +  GIL+ I
Sbjct: 341 GGELAELAPETIAKLNQILPANWSHSNPVDILGDATPERYTKAFDIIQQDPNSDGILV-I 399

Query: 329 FGGIMRCD--VLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDD 386
                  D     + + + +++ +  + L   + G  +  G  ++  S +      D   
Sbjct: 400 LTPQAMTDPTQTAEQLKAYIQKSQKPV-LASWMGGTEITAGETILNNSRIPTYRYPD--S 456

Query: 387 AAQ 389
           AA+
Sbjct: 457 AAR 459


>gi|195338829|ref|XP_002036026.1| GM13655 [Drosophila sechellia]
 gi|194129906|gb|EDW51949.1| GM13655 [Drosophila sechellia]
          Length = 1353

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ +     + EILG
Sbjct: 160 -GVVVAANAEEACQAVDEILG 179


>gi|89900861|ref|YP_523332.1| phosphoribosylamine--glycine ligase [Rhodoferax ferrireducens T118]
 gi|89345598|gb|ABD69801.1| phosphoribosylamine--glycine ligase [Rhodoferax ferrireducens T118]
          Length = 438

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 17/107 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A+        AA + ++    P+ VVK+   A G+             
Sbjct: 106 SKAFMKRHGIPTAEYETFVDPVAAHAYLEQKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  SL    + +  +L  G+  +T   G  G  V  V +E+  
Sbjct: 152 -GVVVALSLAEAHAAVDFMLADGTPGVTHNPGADGPAVPRVVIEEFL 197


>gi|15645535|ref|NP_207711.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           26695]
 gi|22095480|sp|O25577|CARB_HELPY RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|2314054|gb|AAD07963.1| carbamoyl-phosphate synthase (glutamine-hydrolysing) (pyrAb)
           [Helicobacter pylori 26695]
          Length = 1085

 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYTELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|325915238|ref|ZP_08177561.1| phosphoribosylamine--glycine ligase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538598|gb|EGD10271.1| phosphoribosylamine--glycine ligase [Xanthomonas vesicatoria ATCC
           35937]
          Length = 431

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTLGEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|298252680|ref|ZP_06976474.1| carbamoylphosphate synthase large subunit [Gardnerella vaginalis
           5-1]
 gi|297533044|gb|EFH71928.1| carbamoylphosphate synthase large subunit [Gardnerella vaginalis
           5-1]
          Length = 1131

 Score = 45.7 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +   +     S+  A+ A   +  P+ V  S +  GGRG    + +  D++  
Sbjct: 682 EVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSYVL-GGRGM---EIVYDDAQLA 737

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             V+ +L    +D             T  +G   + + ++       E+ +  L D    
Sbjct: 738 KYVDRALDEARAD-------------TVVSGRLPSPLLIDKFLQDAIEIDVDALYDGNEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       AR   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTLSIARGCS 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VRGLINVQYAFMANTLYVIEANP 855



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         AK  +  S+   +  ++TL  P+ V         R       L +
Sbjct: 129 RELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  N V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTNEVLIEEGIEGWKEFELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     +      +D   V       I    + P   +T  +   + D+
Sbjct: 222 -RDAKDNVVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKMRDI 267


>gi|283783377|ref|YP_003374131.1| carbamoyl-phosphate synthase, large subunit [Gardnerella vaginalis
           409-05]
 gi|283441375|gb|ADB13841.1| carbamoyl-phosphate synthase, large subunit [Gardnerella vaginalis
           409-05]
          Length = 1131

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +   +     S+  A+ A   +  P+ V  S +  GGRG    + +  D++  
Sbjct: 682 EVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSYVL-GGRGM---EIVYDDAQLA 737

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             V+ +L    +D             T  +G   + + ++       E+ +  L D    
Sbjct: 738 KYVDRALDEARAD-------------TVVSGRLPSPLLIDKFLQDAIEIDVDALYDGNEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       AR   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTLSIARGCS 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VRGLINVQYAFMANTLYVIEANP 855



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         AK  +  S+   +  ++TL  P+ V         R       L +
Sbjct: 129 RELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  N V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTNEVLIEEGIEGWKEFELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     +      +D   V       I    + P   +T  +   + D+
Sbjct: 222 -RDAKDNVVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKMRDI 267


>gi|251777961|ref|ZP_04820881.1| CoA-binding domain protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082276|gb|EES48166.1| CoA-binding domain protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 471

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 44/237 (18%)

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEA 255
           +AF D         P++ +K G  + +  K +F   A        E  D   E++  I A
Sbjct: 229 EAFIDVCKKFNHKKPIVTIKVGGSK-IGVKAAFAHTASENEGTDDEYYDKIFEEAGAIRA 287

Query: 256 KQHN---------LSYIALDG-NIGCMVNGAGLAMATMDIIKLYG--------------- 290
                         S  +L G N+  + NG G  + + D  +  G               
Sbjct: 288 TTWQEFLDMSLALGSQPSLKGENVVMITNGGGSGLLSCDHFERCGMPLNELKEISPGLGE 347

Query: 291 ---------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVK 340
                    G+P N +D+ G A   +   AF     D +V G+L +I    +   D +V 
Sbjct: 348 RIKAYMPMFGSPLNPVDISGTASPIQYKGAFTQAMRDPNVHGVLGSICPTAVTDVDAVVD 407

Query: 341 GILSAVKEVK-INIPLVMRLEGANV-DIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            ++   +  K +N P +M  +G          + + G+           A++ V+A+
Sbjct: 408 IVIELHETYKHLNKPFIMECQGGEECHRAIMKLRDHGIPAYPT------AEQSVNAM 458


>gi|221213072|ref|ZP_03586048.1| CoA binding domain protein [Burkholderia multivorans CGD1]
 gi|221167285|gb|EED99755.1| CoA binding domain protein [Burkholderia multivorans CGD1]
          Length = 721

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           E  +K +L  Y + V +  V ++   A  A   +  PL V
Sbjct: 504 EQDSKRVLAAYGIRVPRETVAATPDEAAQAASAMRFPLVV 543


>gi|116671948|ref|YP_832881.1| phosphoribosylamine--glycine ligase [Arthrobacter sp. FB24]
 gi|116612057|gb|ABK04781.1| phosphoribosylamine--glycine ligase [Arthrobacter sp. FB24]
          Length = 446

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 16/107 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP A   V S+   A  A+ T   P YVVK    A G+             
Sbjct: 114 AKQVMAEAGVPTAMARVASTAEEAADALDTFGAP-YVVKDDGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGAD 113
            GV V ++    ++  +    +   +  +    G  V+   + DG +
Sbjct: 160 -GVVVTNNRDEALAHAQSCFDAGGSVVIEEFLDGPEVSVFVLCDGRN 205


>gi|254477764|ref|ZP_05091150.1| hypothetical protein RR11_3605 [Ruegeria sp. R11]
 gi|214032007|gb|EEB72842.1| hypothetical protein RR11_3605 [Ruegeria sp. R11]
          Length = 676

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 36/223 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK  L  Y + V       S   A +    L  P+ +           KG       
Sbjct: 476 EAEAKRQLSAYGLRVPHSKRAISATNARAVAVDLGFPVVL-----------KGEGVAHKT 524

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           ++   V   +S ++V     ++                     +E+     + EL + ++
Sbjct: 525 EAGAVVLNLTSGQAVSDAAHDM---------------PARSFLIEEMVTGAVAELLIGVV 569

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D   G V  +A+  GG   E +       +     D    + S  V+ L D    +G A
Sbjct: 570 KDPAHGFVMTLAA--GGTLTEVLQDSASVLLPASEADLETALNSLRVSRLLD--GYRGAA 625

Query: 184 RIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRV 221
             +   L   +     Y       +  +EINPL+      +  
Sbjct: 626 AANREALMAAIRAVEAYVLENALGLEEIEINPLLCTPTDAVAA 668


>gi|195577203|ref|XP_002078462.1| GD22518 [Drosophila simulans]
 gi|194190471|gb|EDX04047.1| GD22518 [Drosophila simulans]
          Length = 1353

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ +     + EILG
Sbjct: 160 -GVVVAANAEEACQAVDEILG 179


>gi|297243387|ref|ZP_06927320.1| carbamoylphosphate synthase large subunit [Gardnerella vaginalis
           AMD]
 gi|296888634|gb|EFH27373.1| carbamoylphosphate synthase large subunit [Gardnerella vaginalis
           AMD]
          Length = 1131

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +   +     S+  A+ A   +  P+ V  S +  GGRG    + +  D++  
Sbjct: 682 EVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSYVL-GGRGM---EIVYDDAQLA 737

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             V+ +L    +D             T  +G   + + ++       E+ +  L D    
Sbjct: 738 KYVDRALDEARAD-------------TVVSGRLPSPLLIDKFLQDAIEIDVDALYDGNEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       AR   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTLSIARGCS 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VRGLINVQYAFMANTLYVIEANP 855



 Score = 39.9 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         AK  +  S+   +  ++TL  P+ V         R       L +
Sbjct: 129 RELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  N V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTNEVLIEEGIEGWKEFELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     +      +D   V       I    + P   +T  +   + D+
Sbjct: 222 -RDAKDNVVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKMRDI 267


>gi|295098822|emb|CBK87911.1| carbamoyl-phosphate synthase, large subunit [Eubacterium
           cylindroides T2-87]
          Length = 725

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 55/184 (29%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+++   PV    ++ +V  A    + L  P+ V  +    G                
Sbjct: 133 RELMQQIGEPVPHSRIVHTVEEAVEYCQKLGYPVVVRPAYTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     + + + S               G   S V+   +E      +E+   ++  R +
Sbjct: 178 GGGFADNEEELRSICEA-----------GLKISPVHQCLIEQSIAGYKEIEYEVI--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
              A +  +   +D   V       I    +  L    ++ +      +   L++ G   
Sbjct: 225 NDNAIVVCSMENVDP--VGIHTGDSIVVAPVQTLTDRENQMLRSASLKIIRALKICGGCN 282

Query: 185 IDGG 188
           +   
Sbjct: 283 VQLA 286


>gi|284929083|ref|YP_003421605.1| carbamoyl-phosphate synthase large subunit [cyanobacterium UCYN-A]
 gi|284809542|gb|ADB95247.1| carbamoyl-phosphate synthase large subunit [cyanobacterium UCYN-A]
          Length = 1081

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 53/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      VPV    + +++  A      +     +++     GG G G       
Sbjct: 129 RELFKKAMDSIGVPVCPSGIANTLKEAREIAINIGSYPLIIRPAFTLGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    +     +           QTG   S ++ + VE      +E  L ++ 
Sbjct: 182 -------IAYHQEEFEDIV-----------QTGLDASPMSQILVEQSLLGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE            + + P   +T ++   L D
Sbjct: 224 D-LADNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQKLRD 267


>gi|317014328|gb|ADU81764.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           Gambia94/24]
          Length = 1085

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYTELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|156938203|ref|YP_001435999.1| phosphoribosylglycinamide formyltransferase 2 [Ignicoccus
           hospitalis KIN4/I]
 gi|172044474|sp|A8ACE0|PURT_IGNH4 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|156567187|gb|ABU82592.1| phosphoribosylglycinamide formyltransferase 2 [Ignicoccus
           hospitalis KIN4/I]
          Length = 402

 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 24/106 (22%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            K  VP  +     +   A  A + +  P  + K ++ + G G                +
Sbjct: 124 EKVGVPTTRYAFAHNEDEAAEACEKVGYPCLI-KPEMSSSGHGH--------------TL 168

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            SS +      +  L            G       VE+  +I REL
Sbjct: 169 ASSPEEAREGFKRAL--------KEARGKS-ERAIVEEFVEIDREL 205


>gi|332710439|ref|ZP_08430386.1| carbamoyl-phosphate synthase large subunit [Lyngbya majuscula 3L]
 gi|332350770|gb|EGJ30363.1| carbamoyl-phosphate synthase large subunit [Lyngbya majuscula 3L]
          Length = 1085

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + +++  A++  + +     +++     GG G G           
Sbjct: 133 KEAMERIGVGVCPSGIANNLKEAKAIAQKIGSYPLIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +             Q G   S V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNKEEYETMA-----------QGGLDASPVSQILVEQSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE V          + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENVDPMGIHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|260461806|ref|ZP_05810052.1| Carbamoyl-phosphate synthase L chain ATP-binding [Mesorhizobium
           opportunistum WSM2075]
 gi|319785343|ref|YP_004144819.1| hypothetical protein Mesci_5700 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|259032447|gb|EEW33712.1| Carbamoyl-phosphate synthase L chain ATP-binding [Mesorhizobium
           opportunistum WSM2075]
 gi|317171231|gb|ADV14769.1| protein of unknown function DUF201 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 398

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 22/104 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL   +VP+    + ++   AE A   +  P+ V+K  +  G R              
Sbjct: 106 RQLLDDADVPIPAYRLAANATDAERAAAEIGLPV-VLKPAV--GIRSI------------ 150

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GVR+  ++  +      +LG   I + +         + VE+  
Sbjct: 151 GVRLCRNIDELAEHTTYLLGGKHIWRSSP-------RIVVEEFV 187


>gi|197103925|ref|YP_002129302.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Phenylobacterium zucineum HLK1]
 gi|196477345|gb|ACG76873.1| acetyl-CoA synthetase / acetyltransferase (GNAT) family protein
           [Phenylobacterium zucineum HLK1]
          Length = 889

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 87/249 (34%), Gaps = 38/249 (15%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
            E QA  +LR Y VP+ +  ++     A  A + L GP+ +                   
Sbjct: 493 LEIQA--VLRAYGVPILETRIVRDPTQAGEAAEALGGPVAL----------KILSRDIPH 540

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLS 121
               GGVR++         +    G  L         + V    ++        +E+   
Sbjct: 541 KSDVGGVRLDL---EGRGPVERAAGDMLANVARLRPDAHVEGFMLQPMVVRPKAQEILAG 597

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVA------KDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           ++ D   G +  + +  GG+ +E +A          + + + +I      T+     L  
Sbjct: 598 IVQDPVFGPLVMVGA--GGVAVEVLADRALGFPPLNEALAREMIG-----TTRISRLLAG 650

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALY 234
             +           L   L +   D  ++  L++NP++  ++G +  LD++I+       
Sbjct: 651 FRDRPPADLAALAKLLVALGRLSTDVPEIVELDLNPVLCDESGAI-ALDARIAV------ 703

Query: 235 RHLDIQELR 243
           R  D+   R
Sbjct: 704 RRPDLSTPR 712


>gi|111023770|ref|YP_706742.1| acetyl-CoA synthetase [Rhodococcus jostii RHA1]
 gi|110823300|gb|ABG98584.1| possible acetyl-CoA synthetase [Rhodococcus jostii RHA1]
          Length = 920

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGG--RGKGRFKELP 63
           ++A  LL  Y V V +    ++   A  A + L  P+ V K+    G   R +     + 
Sbjct: 704 FEASQLLACYGVNVVEFRSATTEDEAVQAAEELGYPVAV-KA---TGEQWRHRPDLGGVR 759

Query: 64  ADSKGGVRVESSLKSVISDIRE 85
            D  G   V  + + + +   E
Sbjct: 760 LDLVGPDSVRWAYRDLAAASGE 781


>gi|290959185|ref|YP_003490367.1| phosphoribosylamine-glycine ligase [Streptomyces scabiei 87.22]
 gi|260648711|emb|CBG71824.1| phosphoribosylamine-glycine ligase [Streptomyces scabiei 87.22]
          Length = 417

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 106 AKEVMAGAGVPTARSYVCTTAEEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|188989922|ref|YP_001901932.1| phosphoribosylamine--glycine ligase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731682|emb|CAP49860.1| purD [Xanthomonas campestris pv. campestris]
          Length = 431

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTLSEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|149191697|ref|ZP_01869939.1| acyl-CoA synthetase [Vibrio shilonii AK1]
 gi|148834486|gb|EDL51481.1| acyl-CoA synthetase [Vibrio shilonii AK1]
          Length = 894

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 76/232 (32%), Gaps = 38/232 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L   + +P     +      A    + +  P+ V         + +       +D  G 
Sbjct: 500 QLFDLFELPTLPTWLAHDPTEAIHLAENIGYPVTV---------KLRSPDIAHKSDIHGV 550

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRT 127
           +        V S  + IL  T ++        R+  + V+  A I   +E+ + ++ D T
Sbjct: 551 MLNLRDANEVSSAAQSILDRTKLSYPEA----RIEGLTVQQMAKIAGGQEIRVKVITDAT 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID- 186
            G   F+   QGG D          KI K  +  L  V       L      +G  R   
Sbjct: 607 FGPAIFLG--QGGSDW---------KIEKEAVTALPPVNMALARYLIINAINKGTLRFQQ 655

Query: 187 ---------GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                           + +      ++  L+I+PL++  +  + +LD+ +  
Sbjct: 656 SPNPVNLGNLAQFLVKISQIIVACPEIHELDIHPLLLNGD-DITILDASVVI 706


>gi|293602008|ref|ZP_06684463.1| 6-carboxyhexanoate-CoA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292819538|gb|EFF78564.1| 6-carboxyhexanoate-CoA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 647

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 41/237 (17%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           E QA  +LR+  +PV    + +   AA  A   L GP+   VV S I             
Sbjct: 428 EVQAMEVLREAGLPVPDCTLATDADAAVGAAVRLAGPVVLKVVSSDIL------------ 475

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV++  S +     +R    + L + +     +R++ V V   A    E  + +
Sbjct: 476 HKSDIGGVKLNLSGEDA---VRGGYAAILDSVRMHRPDARIDGVLVAPMAPKGVECIVGV 532

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D   G V       GG+ +E +     +         L         ++   +     
Sbjct: 533 HRDPIFGPVVMFG--LGGVFVEVLKDVSFR---------LAPFDHAQARAMIGEIQGYAL 581

Query: 178 -----ELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINPLIIMKNGR-LRVLDSKI 226
                           D    L +       D + LEINPL+ +  G+    LD+ +
Sbjct: 582 LQGARGAPPCDIDALADALVALSRFAHVHRDDFASLEINPLLALPEGQGSLALDAVL 638


>gi|302535725|ref|ZP_07288067.1| phosphoribosylamine-glycine ligase [Streptomyces sp. C]
 gi|302444620|gb|EFL16436.1| phosphoribosylamine-glycine ligase [Streptomyces sp. C]
          Length = 417

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    ++A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAGVPTARSYVCTTAEEVDAALDAFGAP-YVVKDDGLAAGKG 152


>gi|294102159|ref|YP_003554017.1| phosphoribosylamine/glycine ligase [Aminobacterium colombiense DSM
           12261]
 gi|293617139|gb|ADE57293.1| phosphoribosylamine/glycine ligase [Aminobacterium colombiense DSM
           12261]
          Length = 423

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++++P A   V  S+   E+A+     P +VVK+   A G+G            
Sbjct: 106 AKEFMARHSIPTAPFDVCLSIEEGEAALNKRQAP-FVVKADGLAAGKGAFVL-------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                         +   ++ + L+ K+ G +G     + +ED      EL +  + D  
Sbjct: 157 ----------QTREEALAVISNLLVKKELGTSG---EKIIIEDFMP-GLELTILCVSDGK 202

Query: 128 SGMVA 132
           +  + 
Sbjct: 203 NYRIL 207


>gi|289423606|ref|ZP_06425406.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Peptostreptococcus anaerobius 653-L]
 gi|289155974|gb|EFD04639.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Peptostreptococcus anaerobius 653-L]
          Length = 449

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK L+++  +PV +G   V+ ++  A+   + +  P+ ++K++   GG+G    +E   
Sbjct: 121 EAKRLMKEAGLPVVEGSETVVENIELAKIICEQIGYPI-IIKARSGGGGKGMRLVRE--- 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +ES+  S   +     G                 VY+E   D  R + + +L 
Sbjct: 177 ----GQDLESAFMSARKEAENAFGDK--------------EVYIEKYIDDPRHIEVQILA 218

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQA 183
           D   G V  + S      I+   +   ++     I D  +    +        +      
Sbjct: 219 D-EHGNVVHLGSR--DCSIQMNHQKIIEEAPATSIRDETMNYLYDMATRAAKYVGYTNAG 275

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            I+   D     Y  F + +  +   +P+  M  G
Sbjct: 276 TIEFLVDKDGKAY--FMEMNTRIQVEHPVTEMITG 308


>gi|218755059|ref|ZP_03533855.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium tuberculosis GM 1503]
          Length = 287

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 27/107 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    V V +   I      +     +  P+ VVK+ +  G  G+            GVR
Sbjct: 103 LAAAGVAVPRYAGIKDPDEIDVFAARVDAPI-VVKA-VRGGYDGR------------GVR 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           +   +       RE L   +              V VE+  D+ REL
Sbjct: 149 MARDVADARDFARECLADGV-------------AVLVEERVDLRREL 182


>gi|255715439|ref|XP_002554001.1| KLTH0E12078p [Lachancea thermotolerans]
 gi|238935383|emb|CAR23564.1| KLTH0E12078p [Lachancea thermotolerans]
          Length = 1829

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + A+ +  +  VP V    ++ +   A    K L  P+ V KS    GG G
Sbjct: 741 HSAREIAEEAGVPLVPGSDLVKTPQEAREIAKKLEYPVMV-KSTAGGGGIG 790


>gi|294498135|ref|YP_003561835.1| pyruvate carboxylase [Bacillus megaterium QM B1551]
 gi|294348072|gb|ADE68401.1| pyruvate carboxylase [Bacillus megaterium QM B1551]
          Length = 1149

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 35/204 (17%)

Query: 14  KYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + ++PV  G    I S+  A+        P  ++K+ +  GGRG    ++  +       
Sbjct: 132 QADIPVIPGTDGPIDSIDEAKEFANQHGYP-LMIKAALGGGGRGMRIVRDADS------- 183

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  S     S+ +   G+                VYVE   +  + + + +L D    +V
Sbjct: 184 LNESYDRAKSEAKAAFGND--------------EVYVEKLVENPKHIEVQILGDEQGNVV 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
                 +    ++   +   +    + ID   G+      +   ++E          +  
Sbjct: 230 HLY---ERDCSVQRRHQKVVEVAPSVSID--EGLRLRICEAAVQLMEKVQYINAGTVEFL 284

Query: 192 PNLYKAFCDKDMSLLEINPLIIMK 215
            +        D   +E+NP + ++
Sbjct: 285 VS------GNDFYFIEVNPRVQVE 302


>gi|296120606|ref|YP_003628384.1| carbamoyl-phosphate synthase, large subunit [Planctomyces
           limnophilus DSM 3776]
 gi|296012946|gb|ADG66185.1| carbamoyl-phosphate synthase, large subunit [Planctomyces
           limnophilus DSM 3776]
          Length = 1090

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 57/168 (33%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + V +  +++S+  A   +K +  P+ +         R       +      
Sbjct: 133 KEAMQKIGLDVCRSRIVNSMEEARDVLKEIGLPIII---------RASFTLGGMGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +     +R+           G   S +N V +E+     +E  + ++ D+ +
Sbjct: 181 ---IAYNREEFEEKVRK-----------GIELSPINEVLLEESIIGWKEYEMEVMRDK-A 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T  +   + D 
Sbjct: 226 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDREYQRMRDA 267


>gi|158335328|ref|YP_001516500.1| phosphoribosylamine--glycine ligase [Acaryochloris marina
           MBIC11017]
 gi|158305569|gb|ABW27186.1| phosphoribosylamine--glycine ligase [Acaryochloris marina
           MBIC11017]
          Length = 427

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  +P AK    + V AA++ I++   P+ V+K+   A G+             
Sbjct: 108 AKTLMTEAGIPTAKAQTFTDVDAAQAYIQSEGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L   ++ + E       + + G  G  V    +E+     +E+ +  L D  
Sbjct: 154 -GVTVALTLDEALNAVNEAF-----SGKFGEAGQTV---LIEEYLT-GQEVSVLALTDGK 203

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 204 TIKPLIPA 211


>gi|320580831|gb|EFW95053.1| Large subunit of carbamoyl phosphate synthetase [Pichia angusta
           DL-1]
          Length = 1138

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 67/221 (30%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + N+P+A+ + + +V  A +A   +  P+ V  +    G                G  
Sbjct: 185 LNEINIPIAESIAVETVDDALAAADKIGYPIIVRSAYALGGL---------------GSG 229

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+   + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 230 FASNETELRNLASQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 276

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 277 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECN 329

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L Y+   + +  L   + L     G      +
Sbjct: 330 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 369


>gi|310790816|gb|EFQ26349.1| carbamoyl-phosphate synthase [Glomerella graminicola M1.001]
          Length = 1167

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 70/233 (30%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     ++P+AK + + +V  A  A + +  P+ V  +    G            
Sbjct: 213 RDLFARALDEIDIPIAKSIAVGTVEEALDAAEKVGYPIIVRAAYALGGL----------- 261

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +EL   ++ 
Sbjct: 262 ----GSGFANNQEELRNMAARSLTLS-------------PQILVEKSLKGWKELEYEVVR 304

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D  +  +          ++E            +++ P   ++ E+          +   L
Sbjct: 305 DANNNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHL 357

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 358 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 409


>gi|37526112|ref|NP_929456.1| hypothetical protein plu2198 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785542|emb|CAE14491.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 420

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 31/127 (24%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ--IHAGGRGKGRFKELPAD 65
           +K  ++KY +P     +  S   A+    TLP P+ V+K+   +H G             
Sbjct: 108 SKKFMKKYQIPTPYSAICESQEQAQKFADTLPLPV-VIKADGMVHGG------------- 153

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +    + V + + E       T+  GP         VE+  +   E+  ++L D
Sbjct: 154 --TGVVIAQDRQHVKNTLEE-----FFTRNVGPM-------LVEEFIE-GEEVSYTILFD 198

Query: 126 RTSGMVA 132
             + +  
Sbjct: 199 GKNYLPL 205


>gi|94313287|ref|YP_586496.1| hypothetical protein Rmet_4362 [Cupriavidus metallidurans CH34]
 gi|93357139|gb|ABF11227.1| conserved hypothetical protein with a putative CoA binding domain
           [Cupriavidus metallidurans CH34]
          Length = 709

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 124/366 (33%), Gaps = 41/366 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    V  S   A      +  P+ V+K               L    
Sbjct: 27  EGKLVCDAYGISVPGEGVARSPTGAVELASKMGYPV-VLKIV---------SPDILHKTE 76

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV V  +     +D+     + +   +     +++  V V+      +E+ +  + D 
Sbjct: 77  AGGVLVGVNS---AADVERGYLTIVENAKKYNANAQIVGVQVQQMIGGGQEVIIGAVTDP 133

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           + G    +A   GG+ +E +     +       D L  +     A +   +       R 
Sbjct: 134 SFGK--LVAFGLGGVLVEVLKDVTFRMAPATYDDALSMLDGIAAADVLKGVRGADPANRE 191

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
               +   + +   D  ++S L++NP+   K+G +   D +I  DD+        ++ R 
Sbjct: 192 ALAGMIQRVSELVSDFPEISELDLNPVFASKDGAI-AADVRIVIDDS-----PQPEKYRP 245

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY--GGAPANFLDVGGG 302
             EE  R+       ++ I     +  +   A        ++K    GG       +   
Sbjct: 246 SQEEIVRQ-------MNRIMRPDTVAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPK 298

Query: 303 ADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN-IPLVMRLEG 361
           AD+     A+K +        + + +F  I       K +  A++EV    IP  + +  
Sbjct: 299 ADEIMGMTAYKSVLDVPG--DVDVAVFA-IP-----AKFVAQALEEVGKKGIPGAVLIPS 350

Query: 362 ANVDIG 367
              + G
Sbjct: 351 GFAETG 356


>gi|312622333|ref|YP_004023946.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202800|gb|ADQ46127.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 420

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V +++  A   +        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTNIEDAVGFVNQTSQYPVVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTL-------ITKQTGPTGSRVNCVYVEDGADI 114
            GV + ++ +  I  +  I+   +       +  +    G  V+   V DG DI
Sbjct: 152 -GVIIANNQQEAIDALNLIMREKVFGAAGDKVIIEDYLLGEEVSVFVVSDGKDI 204


>gi|306832531|ref|ZP_07465671.1| phosphoribosylamine-glycine ligase [Streptococcus bovis ATCC
           700338]
 gi|304425289|gb|EFM28415.1| phosphoribosylamine-glycine ligase [Streptococcus bovis ATCC
           700338]
          Length = 420

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+++ KY+VP A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMAKYHVPTAAYGTFSDFEQAKSYIEEHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  I    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAIEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|222529433|ref|YP_002573315.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456280|gb|ACM60542.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor bescii DSM
           6725]
          Length = 420

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V +++  A   +        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTNIEDAVGFVNQTSQYPVVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTL-------ITKQTGPTGSRVNCVYVEDGADI 114
            GV + ++ +  I  +  I+   +       +  +    G  V+   V DG DI
Sbjct: 152 -GVIIANNQQEAIDALNLIMREKVFGAAGDKVIIEDYLLGEEVSVFVVSDGKDI 204


>gi|290889766|ref|ZP_06552854.1| hypothetical protein AWRIB429_0244 [Oenococcus oeni AWRIB429]
 gi|290480590|gb|EFD89226.1| hypothetical protein AWRIB429_0244 [Oenococcus oeni AWRIB429]
          Length = 1064

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 35/225 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+     PV +  +  ++  A      +  P+ V  +    G  G+            
Sbjct: 133 KQLMEALKEPVPESRIARTLEQAVHFADQIGYPIIVRPAYTLGGTGGE------------ 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +    +            G   S V  V +E      +E+   ++ D  +
Sbjct: 181 ---IVENSEQLTEVAKN-----------GLELSPVTQVLIEKSIAGYKEIEFEVMRDG-N 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                +AS +   + + V       I    +    D    +  +    +   L+++G   
Sbjct: 226 DNALIVASME---NFDPVGIHTVDSIVVSPVQTLSDREYQMLRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
           I       +L     + +  +   + L     G     + +KI+ 
Sbjct: 283 IQLALDPDSLRYYIIEVNPRVSRSSALASKATGYPIAKMAAKIAI 327


>gi|284991555|ref|YP_003410109.1| carbamoyl-phosphate synthase large subunit [Geodermatophilus
           obscurus DSM 43160]
 gi|284064800|gb|ADB75738.1| carbamoyl-phosphate synthase, large subunit [Geodermatophilus
           obscurus DSM 43160]
          Length = 1101

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 53/167 (31%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++R       +  V +SV  A      +  P+ +                  P+ + G
Sbjct: 133 KDIVRSIGADAPRSRVCASVEEALETAAEVGYPVVI-----------------RPSFTMG 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +             S       G   S V+ V +E+     +E  L L+ DR S
Sbjct: 176 GLGSGFATDEA---------SLRRMASHGLADSPVHTVLIEESVLGWKEYELELMRDR-S 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE +          + + P + +T  +   + D
Sbjct: 226 DNVVVVCS------IENIDAMGVHTGDSVTVAPAMTLTDREYQRMRD 266


>gi|320352383|ref|YP_004193722.1| ATP-grasp domain-containing protein [Desulfobulbus propionicus DSM
           2032]
 gi|320120885|gb|ADW16431.1| ATP-grasp domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 705

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 73/217 (33%), Gaps = 19/217 (8%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV-E 73
           Y+VP    +V  +   AE+  + +  P+ V+K    A          +     GGV V  
Sbjct: 499 YDVPSPPALVARTAEEAEALAERIGCPV-VLKVVSPAA---------IHKTEVGGVLVGI 548

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S +        I     + +     G+ +  V V   A    + ++  L D + G V  
Sbjct: 549 GSPEEARRGFTRI--KDNLARHCP--GAELAGVRVMAMAPAGLDFFIGGLRDPSFGPVVL 604

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCDMLELQGQARIDGGDLFP 192
             S  GG+ +E               +    +        L  M                
Sbjct: 605 FGS--GGILVELFQDVERVLCPTSTAEIRAKLERLKAGRILAGMRGQPPIDPEPFIQAVG 662

Query: 193 NLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           N+ +   D   ++ L++NP+ I+  G L  LD+++  
Sbjct: 663 NVARLLVDCPRIAELDVNPVRILPTGALLALDARMRV 699


>gi|312862689|ref|ZP_07722929.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|311101549|gb|EFQ59752.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
          Length = 387

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A+K +  P+ + K     G      FK    D   
Sbjct: 117 KKLFQKAGVPVVPGAVIKTDEDVDKAVKEIGLPM-IAKPDNGVG--AAATFKLETEDDIN 173

Query: 69  GVRVESSLKSVISDIR 84
             + E   ++V    +
Sbjct: 174 HFKAEWDRETVYFFEK 189


>gi|297616796|ref|YP_003701955.1| phosphoribosylamine/glycine ligase [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144633|gb|ADI01390.1| phosphoribosylamine/glycine ligase [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 428

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIK---TLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +K L+ KY VP A+  V   +  A +  +     PG   VVK+   A G+          
Sbjct: 108 SKNLMHKYGVPTAEYRVFERIEEAAAYTRDRMKEPGLRLVVKADGLAAGK---------- 157

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               GV V  + +  +  + +     ++ K  G  G   + V VE+         +S+  
Sbjct: 158 ----GVVVAENQEEALEALEQ----AMVHKVFGSAG---DRVVVEECLYGEE---VSVFA 203

Query: 125 DRTSGMVAFIASTQG 139
                 V F+A+ Q 
Sbjct: 204 LVDGEEVVFLAAAQD 218


>gi|261418596|ref|YP_003252278.1| phosphoribosylamine--glycine ligase [Geobacillus sp. Y412MC61]
 gi|319765411|ref|YP_004130912.1| phosphoribosylamine/glycine ligase [Geobacillus sp. Y412MC52]
 gi|261375053|gb|ACX77796.1| phosphoribosylamine/glycine ligase [Geobacillus sp. Y412MC61]
 gi|317110277|gb|ADU92769.1| phosphoribosylamine/glycine ligase [Geobacillus sp. Y412MC52]
          Length = 430

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 7/115 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----KGRFKELP 63
           AK L++KY +P A     +S   A++ I+    P+ VVK+   A G+G    +     L 
Sbjct: 106 AKELMKKYGIPTADHATFTSYEEAKAYIEQKGAPI-VVKADGLAAGKGVTVAQTVEDALA 164

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           A     V  +         I E L     +      G +V  + +    D  R  
Sbjct: 165 AAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLSIAQ--DHKRAY 217


>gi|156545144|ref|XP_001602678.1| PREDICTED: similar to glycinamide ribonucleotide
           synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Nasonia vitripennis]
          Length = 1038

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 24/136 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++N+P A+    +    A+  ++    P +VVK+   A G+             
Sbjct: 140 SKAFMDRHNIPTARWKGFTKSEEAKKFVREASFPAWVVKAAGLAAGK------------- 186

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++       I E+LG     K+ G  G     V VE+         +S+L    
Sbjct: 187 -GVVVATNNDEACQAIDEMLG----DKKFGSAG---ETVVVEELLQGEE---VSMLAFTD 235

Query: 128 SGMVAFIASTQGGMDI 143
              V  +A  Q    I
Sbjct: 236 GKTVVSMAPAQDHKRI 251


>gi|82750808|ref|YP_416549.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           RF122]
 gi|123549035|sp|Q2YXG5|CARB_STAAB RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|82656339|emb|CAI80756.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
           RF122]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|219850438|ref|YP_002464871.1| lysine biosynthesis enzyme LysX [Chloroflexus aggregans DSM 9485]
 gi|219544697|gb|ACL26435.1| lysine biosynthesis enzyme LysX [Chloroflexus aggregans DSM 9485]
          Length = 283

 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 13/74 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  + ++  +  +A  AI+ L  P+ V+K  I + GR   +  +              
Sbjct: 98  GVPTPRCLLAFTPESALEAIEQLGYPV-VLKPVIGSWGRMVSKIND------------RD 144

Query: 76  LKSVISDIREILGS 89
               I + R++LG+
Sbjct: 145 AAEAILEHRDVLGN 158


>gi|172035999|ref|YP_001802500.1| phosphoribosylglycinamide synthetase [Cyanothece sp. ATCC 51142]
 gi|171697453|gb|ACB50434.1| phosphoribosylglycinamide synthetase [Cyanothece sp. ATCC 51142]
          Length = 419

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 17/106 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  + +A+G   +   AA++ I     P+ VVK+   A G+             
Sbjct: 108 AKKLMAESGIAIAQGKTFTDAQAAKAYITQQGAPI-VVKADNLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDG 111
            GV V  +++   + + E++  G  LI  +    G  V+ + + DG
Sbjct: 154 -GVIVAQTVEEAYNAVDELMQTGFNLIVVEECLQGEEVSILALTDG 198


>gi|21282815|ref|NP_645903.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus MW2]
 gi|300912233|ref|ZP_07129676.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|22095489|sp|P58940|CARB_STAAW RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|21204253|dbj|BAB94951.1| carbamoyl-phosphate synthase large chain [Staphylococcus aureus
           subsp. aureus MW2]
 gi|300886479|gb|EFK81681.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|82594846|ref|XP_725597.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23480664|gb|EAA17162.1| CoA binding domain, putative [Plasmodium yoelii yoelii]
          Length = 949

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 84/244 (34%), Gaps = 35/244 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++EY +K +L  Y++PV    +  ++   E+A   +  P  +         +        
Sbjct: 551 LNEYDSKVILETYDIPVVNTKIYKTLLDVENA-DNINYPCAM---------KIYSDTITH 600

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYL 120
             D  G +   ++ + +I+  ++I     + K     G     V +++  +I    EL L
Sbjct: 601 KKDIGGVILNINTKEELINGYKQI--YENVKKHKQEKGF--QGVTIQNMININDGIELIL 656

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------- 172
               D+  G V    S  GG  +E            LLI PL    +             
Sbjct: 657 GYYYDKCFGPVLLFGS--GGSYVEIFKDTV------LLIPPLTYSYTHHTIKNTKIYNAL 708

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISFDD 230
           L      +            N  +   D    + E  INPL +  N ++  LD++ +   
Sbjct: 709 LGKSSRFKKCDMPKLITTIMNFSELVSDLLPYINESDINPLFVSGN-KMIALDARFTLRK 767

Query: 231 NALY 234
           +  +
Sbjct: 768 SINF 771


>gi|283770264|ref|ZP_06343156.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus H19]
 gi|283460411|gb|EFC07501.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus H19]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|253731820|ref|ZP_04865985.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253724419|gb|EES93148.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|49483366|ref|YP_040590.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|282903756|ref|ZP_06311644.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus C160]
 gi|282905520|ref|ZP_06313375.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282908496|ref|ZP_06316326.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|283957944|ref|ZP_06375395.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|295427688|ref|ZP_06820320.1| carbamoyl-phosphate synthase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591353|ref|ZP_06949991.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|60389633|sp|Q6GHN2|CARB_STAAR RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|49241495|emb|CAG40181.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, large
           chain [Staphylococcus aureus subsp. aureus MRSA252]
 gi|282327558|gb|EFB57841.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282330812|gb|EFB60326.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282595374|gb|EFC00338.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus C160]
 gi|283790093|gb|EFC28910.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|295128046|gb|EFG57680.1| carbamoyl-phosphate synthase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576239|gb|EFH94955.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|315194089|gb|EFU24482.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|116490364|ref|YP_809908.1| carbamoyl-phosphate synthase large subunit [Oenococcus oeni PSU-1]
 gi|122277447|sp|Q04H29|CARB_OENOB RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|116091089|gb|ABJ56243.1| carbamoyl-phosphate synthase large subunit [Oenococcus oeni PSU-1]
          Length = 1064

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 35/225 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+     PV +  +  ++  A      +  P+ V  +    G  G+            
Sbjct: 133 KQLMEALKEPVPESRIARTLEQAVHFADQIGYPIIVRPAYTLGGTGGE------------ 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +    +            G   S V  V +E      +E+   ++ D  +
Sbjct: 181 ---IVENSEQLTEVAKN-----------GLELSPVTQVLIEKSIAGYKEIEFEVMRDG-N 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                +AS +   + + V       I    +    D    +  +    +   L+++G   
Sbjct: 226 DNALIVASME---NFDPVGIHTVDSIVVSPVQTLSDREYQMLRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
           I       +L     + +  +   + L     G     + +KI+ 
Sbjct: 283 IQLALDPDSLRYYIIEVNPRVSRSSALASKATGYPIAKMAAKIAI 327


>gi|319956213|ref|YP_004167476.1| phosphoribosylamine--glycine ligase [Nitratifractor salsuginis DSM
           16511]
 gi|319418617|gb|ADV45727.1| phosphoribosylamine--glycine ligase [Nitratifractor salsuginis DSM
           16511]
          Length = 424

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +Y +P A+ +   S   A   I TL  P+ VVK+     G+              
Sbjct: 105 KNFLARYGIPTARYIETDSFEKASEFIDTLEAPI-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S        R +L      +  G  G   + + VE+  D
Sbjct: 150 GVIIAPSRDEAREAARGML----SGEAFGEAG---SRIVVEEFLD 187


>gi|307110291|gb|EFN58527.1| hypothetical protein CHLNCDRAFT_34136 [Chlorella variabilis]
          Length = 454

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 23/125 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K + RKYN+P A+    ++   A++ I     P+ V               K     +  
Sbjct: 136 KNICRKYNIPTAQYETFTNPADAKAFITQCGAPIVV---------------KTSGLAAGK 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     + ++    ++    G  G+ V    VE+        + + + D  +
Sbjct: 181 GVIVAQTLEEAYQAVDDM----MVNNAFGSAGATV---VVEEFLSGEEASFFAFI-DGEN 232

Query: 129 GMVAF 133
            +   
Sbjct: 233 CIPLV 237


>gi|49486042|ref|YP_043263.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57651772|ref|YP_186078.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160076|ref|YP_493793.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88194909|ref|YP_499709.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|151221326|ref|YP_001332148.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161509376|ref|YP_001575035.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221141993|ref|ZP_03566486.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus str. JKD6009]
 gi|253733559|ref|ZP_04867724.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257425256|ref|ZP_05601681.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257427916|ref|ZP_05604314.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257430549|ref|ZP_05606931.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257433310|ref|ZP_05609668.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257436152|ref|ZP_05612199.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M876]
 gi|258452500|ref|ZP_05700506.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A5948]
 gi|262048106|ref|ZP_06020993.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           D30]
 gi|262051838|ref|ZP_06024054.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           930918-3]
 gi|282910775|ref|ZP_06318578.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282913978|ref|ZP_06321765.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M899]
 gi|282918900|ref|ZP_06326635.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus C427]
 gi|282919985|ref|ZP_06327714.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9765]
 gi|282924023|ref|ZP_06331699.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus C101]
 gi|284024127|ref|ZP_06378525.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus 132]
 gi|293501011|ref|ZP_06666862.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293509970|ref|ZP_06668678.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M809]
 gi|293526558|ref|ZP_06671243.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M1015]
 gi|294848196|ref|ZP_06788943.1| carbamoyl-phosphate synthase [Staphylococcus aureus A9754]
 gi|297208153|ref|ZP_06924584.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|304381234|ref|ZP_07363887.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|60389608|sp|Q6GA10|CARB_STAAS RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|81859599|sp|Q5HGM9|CARB_STAAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|122539724|sp|Q2FZ72|CARB_STAA8 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|123486238|sp|Q2FHN5|CARB_STAA3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|172048850|sp|A6QGA4|CARB_STAAE RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|189081835|sp|A8Z3P0|CARB_STAAT RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|49244485|emb|CAG42914.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, large
           chain [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57285958|gb|AAW38052.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126050|gb|ABD20564.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87202467|gb|ABD30277.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374126|dbj|BAF67386.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|160368185|gb|ABX29156.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), large subunit
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253728613|gb|EES97342.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257271713|gb|EEV03851.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257274757|gb|EEV06244.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257278677|gb|EEV09296.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257281403|gb|EEV11540.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257284434|gb|EEV14554.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M876]
 gi|257859718|gb|EEV82560.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A5948]
 gi|259160239|gb|EEW45267.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           930918-3]
 gi|259163672|gb|EEW48227.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           D30]
 gi|269940695|emb|CBI49076.1| putative carbamoyl-phosphate synthase,pyrimidine-specific, large
           chain [Staphylococcus aureus subsp. aureus TW20]
 gi|282313995|gb|EFB44387.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus C101]
 gi|282316710|gb|EFB47084.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus C427]
 gi|282322046|gb|EFB52370.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M899]
 gi|282325380|gb|EFB55689.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282594701|gb|EFB99685.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9765]
 gi|290920630|gb|EFD97693.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096016|gb|EFE26277.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466914|gb|EFF09432.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus M809]
 gi|294824996|gb|EFG41418.1| carbamoyl-phosphate synthase [Staphylococcus aureus A9754]
 gi|296887396|gb|EFH26298.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|302751025|gb|ADL65202.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, large
           chain [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340217|gb|EFM06158.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312438420|gb|ADQ77491.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315198440|gb|EFU28769.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140982|gb|EFW32829.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320144303|gb|EFW36069.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329313871|gb|AEB88284.1| Carbamoyl-phosphate synthase large chain [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724741|gb|EGG61246.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329728758|gb|EGG65179.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|323442294|gb|EGA99924.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           O46]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|312135338|ref|YP_004002676.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           owensensis OL]
 gi|311775389|gb|ADQ04876.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           owensensis OL]
          Length = 1077

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P   G    S+  A    + +  P+ V  S +  G   +  F     +     
Sbjct: 677 LLKNLNIPYPPGGAAYSLEDAVKVAEKIGYPVLVRPSYVLGGRAMEIVFSRDELEKYIKA 736

Query: 71  RVESSLKSVISDIREILGST 90
            +E S+K  I   + ILG  
Sbjct: 737 AIEISIKHPILIDKYILGKE 756



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 30/129 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKKTMIEIGEPVPKSIIAHSVQEAIDFAREVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEELKYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVMR 222

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 223 DSNDNCITV 231


>gi|297528682|ref|YP_003669957.1| phosphoribosylamine/glycine ligase [Geobacillus sp. C56-T3]
 gi|297251934|gb|ADI25380.1| phosphoribosylamine/glycine ligase [Geobacillus sp. C56-T3]
          Length = 430

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----KGRFKELP 63
           AK L++KY +P A     +S   A++ I+    P+ VVK+   A G+G    +   + L 
Sbjct: 106 AKELMKKYGIPTADHATFTSYEEAKAYIEQKGAPI-VVKADGLAAGKGVTVAQTVEEALA 164

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           A     V  +         I E L     +      G +V  + +    D  R  
Sbjct: 165 AAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQ--DHKRAY 217


>gi|294010222|ref|YP_003543682.1| acyl-CoA synthetase (NDP forming) [Sphingobium japonicum UT26S]
 gi|292673552|dbj|BAI95070.1| acyl-CoA synthetase (NDP forming) [Sphingobium japonicum UT26S]
          Length = 706

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 20/228 (8%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++ KALLR+  +P+  G +  S   A  A   + GP+  +K+Q                
Sbjct: 494 EHRGKALLREAGLPIPTGRLAVSAADAALAASEIDGPV-ALKAQ---------SAVLTHK 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  S ++ +        +             ++ V VE  A    EL +S+  
Sbjct: 544 SDLGGVSLNLSDEASVLAA---FATQTAAIAKHRPDVVLDGVLVEAMAPKGHELVVSVRR 600

Query: 125 DRTSGMVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           D        +    G     + +VA   P    + ++  L G+    +  L         
Sbjct: 601 DTD-WGPVMMVGLGGVWIEALHDVAMLSPDSDRQDVLRALNGLKGGSI--LRGWRGEPAA 657

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISF 228
                 D    L +       +  +EINPL +   G+   VLD+ ++ 
Sbjct: 658 DLEAVVDTVIQLGRIIRGNPRIEEIEINPLSVRDAGQGATVLDALVTL 705


>gi|258423754|ref|ZP_05686640.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9635]
 gi|282916452|ref|ZP_06324214.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus D139]
 gi|257845986|gb|EEV70014.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9635]
 gi|282319892|gb|EFB50240.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus D139]
 gi|298694496|gb|ADI97718.1| carbamoyl-phosphate synthase small chain [Staphylococcus aureus
           subsp. aureus ED133]
 gi|323440977|gb|EGA98684.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           O11]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|190348700|gb|EDK41205.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 557

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 72/225 (32%), Gaps = 45/225 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL ++ ++P+A+ + + +V  A +A K++  P+ V         R       L +   
Sbjct: 190 AKAL-KEIDIPIAESIAVETVDDALAAAKSVGYPIIV---------RSAYSLGGLGSG-- 237

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                 ++ + +       L             S    + VE      +E+   ++ DR 
Sbjct: 238 ----FAANEEELRDLSSRSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRV 280

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
              +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 281 GNCITV-------CNMENFDPLGVHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVV 333

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           G+  +        L Y+   + +  L   + L     G      +
Sbjct: 334 GECNVQYSLQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 377


>gi|186660401|gb|ACC86069.1| phosphoribosylglycinamide transformylase [Cricetulus griseus]
          Length = 1010

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEDACSFIMSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  + +     ++EI    +  K  G  G     V VE+  D
Sbjct: 157 -GVIVAKNKEEACKAVQEI----MQEKSFGAAG---ETVVVEEFLD 194


>gi|68475943|ref|XP_717912.1| likely carbamoyl-phosphate synthetase large subunit [Candida
           albicans SC5314]
 gi|68476076|ref|XP_717847.1| likely carbamoyl-phosphate synthetase large subunit [Candida
           albicans SC5314]
 gi|46439581|gb|EAK98897.1| likely carbamoyl-phosphate synthetase large subunit [Candida
           albicans SC5314]
 gi|46439648|gb|EAK98963.1| likely carbamoyl-phosphate synthetase large subunit [Candida
           albicans SC5314]
 gi|238879617|gb|EEQ43255.1| carbamoyl-phosphate synthase arginine-specific large chain [Candida
           albicans WO-1]
          Length = 1149

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 68/220 (30%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++P+A+ + + +V  A +A K +  P+ V         R       L +       
Sbjct: 190 LKEIDIPIAESIAVETVDDALNAAKEVGYPIIV---------RSAYSLGGLGSG------ 234

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 235 FAANEEELRNLAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 281

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 282 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIIRHLGVVGECN 334

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 335 VQYALQPDGLDFRVIEVNARLSRSSALASKATGYPLAYTA 374


>gi|332652384|ref|ZP_08418129.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Ruminococcaceae
           bacterium D16]
 gi|332517530|gb|EGJ47133.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Ruminococcaceae
           bacterium D16]
          Length = 455

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ L++K+NVPV  G    + +   A+   + +  P+ V  S
Sbjct: 119 ARELMQKHNVPVVPGSDGAVETAQQAQEIAEKIGYPVLVKAS 160


>gi|301632056|ref|XP_002945107.1| PREDICTED: uncharacterized protein yfiQ-like [Xenopus (Silurana)
           tropicalis]
          Length = 900

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 82/233 (35%), Gaps = 26/233 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++K LL  +++PV + ++  + + A      L  P+  +K                
Sbjct: 484 LTEMESKTLLAAFHIPVTRTLLARNANEAMMIATQLGFPV-ALKID--------SPDVTH 534

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D  G +    +  +       ++             +R++ V V+  A   R   + +
Sbjct: 535 KSDVDGVMLDVHNATAARDAYEAMVQRV----ARAAPKARIHGVTVQPMARATRGREVCI 590

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVA------KDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            + R       I    GG  IE +           Q + + LI+      S    +L + 
Sbjct: 591 GLVRDDPFGPVITFGAGGTMIELIGDRAMELPPLNQFLARRLIE-----RSRVAQTLGEW 645

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                        +   + +  C    +  ++INPLI+ ++G +  +D++I  
Sbjct: 646 RGANAVDHAALEQVLLRVSEMACALPQLREMDINPLIVDEHGTV-AVDARIVV 697


>gi|297619719|ref|YP_003707824.1| CoA-binding domain-containing protein [Methanococcus voltae A3]
 gi|297378696|gb|ADI36851.1| CoA-binding domain protein [Methanococcus voltae A3]
          Length = 707

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 31/154 (20%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
           N+G + N  G  +   D++  YG   A F                     LD+ G AD D
Sbjct: 303 NVGIITNAGGFGVLATDMVSKYGLKMAEFEEKTITELKKYLPDTSGVSNPLDLIGDADTD 362

Query: 307 KVAAAFKIITSDSSVKGILINIFGGIMRCDVL--VKGILS---AVKEVKINIPLV-MRLE 360
           +   AF+ +  DS+V GI++ I       D +   K ++    A++     IP+V   + 
Sbjct: 363 RYKHAFEELAKDSNVDGIVV-ILTPQGMTDDIGAAKELVKFQDALRAKGEAIPIVAAWVG 421

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
           G +V  G   + E  +      +L   A K + A
Sbjct: 422 GGSVAEGAEYLKEHEIPTFMCPEL---AVKALSA 452



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 32/223 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY-VVKSQIHAGGRGKGRFKELP 63
           E  AK  L+   VP     V +SV  A     T+   +  VV +QI           +  
Sbjct: 496 ENNAKEFLKINGVPTPGRYVATSVEEAVKYASTMDKVVMKVVSAQIL-------HKSDAG 548

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                   +E +  ++I +  + L       Q G TG  ++ V +E+  +  +E+ +   
Sbjct: 549 CVLIAPTDIEGAYNTIIENGTQYLA------QKGETG-VIDGVLIEEFVE-GKEIIIGGK 600

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            D        +    GG+ +E +            + P+    +ED+         L  +
Sbjct: 601 KD-EVFGPVIMTGL-GGIFVEVMKD------VTFGVHPITKNYAEDMLKQLRTYKILEGV 652

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGR 218
                +      +L   +       D +  ++INP+ + ++G+
Sbjct: 653 RGEPKRDIEFIKELIVRVGVIMEAYDEIQEIDINPVFVKEDGK 695


>gi|288904255|ref|YP_003429476.1| phosphoribosylglycinamide synthetase [Streptococcus gallolyticus
           UCN34]
 gi|306830282|ref|ZP_07463453.1| phosphoribosylamine-glycine ligase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977232|ref|YP_004286948.1| phosphoribosylamine--glycine ligase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288730980|emb|CBI12524.1| phosphoribosylglycinamide synthetase [Streptococcus gallolyticus
           UCN34]
 gi|304427529|gb|EFM30630.1| phosphoribosylamine-glycine ligase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177160|emb|CBZ47204.1| phosphoribosylamine--glycine ligase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 420

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+++ KY+VP A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMAKYHVPTAAYGTFSDFEQAKSYIEEHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  I    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAIEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|283470413|emb|CAQ49624.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus ST398]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|225568277|ref|ZP_03777302.1| hypothetical protein CLOHYLEM_04351 [Clostridium hylemonae DSM
          15053]
 gi|225162996|gb|EEG75615.1| hypothetical protein CLOHYLEM_04351 [Clostridium hylemonae DSM
          15053]
          Length = 220

 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 3  IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
          ++E  AK LL +Y VP+AK +V  +   A  A + L  P+ +
Sbjct: 5  LNELDAKNLLSEYGVPMAKSMVAGTKEEAVRAAEELEFPVVM 46


>gi|302332807|gb|ADL23000.1| putative carbamoyl-phosphate synthase, pyrimidine-specific, large
           chain [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 1057

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKTATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|262274032|ref|ZP_06051844.1| protein acetyltransferase [Grimontia hollisae CIP 101886]
 gi|262221842|gb|EEY73155.1| protein acetyltransferase [Grimontia hollisae CIP 101886]
          Length = 893

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 35/243 (14%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A+  L KY + V    +      A    + +  P+ V         + +       +D
Sbjct: 496 HEARPFLSKYGINVMATWLAEDAAEAAQITEQVGYPVAV---------KLRSPDIAHKSD 546

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
             G +   ++   V +  + +L    +T  T     R+  + ++  A+    +EL + + 
Sbjct: 547 VNGVMLDLNNATEVANAAQLMLNRVSMTYPTA----RIEGLQIQSMANRAGSQELRVCVR 602

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDM 176
            D   G V  +       DI   A         + I PL    +  +         L   
Sbjct: 603 HDPVFGPVILLGEGGSEWDINRDAA--------VAIPPLNMALARYLVIGALKSGKLRQR 654

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---FDDNA 232
                            L +   D  +++ L+I+PL++  +    VLD+ I    F+ +A
Sbjct: 655 GHPYNLDVNALCHFLVTLSQILIDVPEITELDIHPLLVTGD-SFTVLDASIRLSPFEGDA 713

Query: 233 LYR 235
             R
Sbjct: 714 ASR 716


>gi|183602593|ref|ZP_02963958.1| CarB [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683635|ref|YP_002470018.1| CarB [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190667|ref|YP_002968061.1| carbamoylphosphate synthase large subunit [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196073|ref|YP_002969628.1| carbamoylphosphate synthase large subunit [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|254813559|sp|B8DTW3|CARB_BIFA0 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|183218234|gb|EDT88880.1| CarB [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621285|gb|ACL29442.1| CarB [Bifidobacterium animalis subsp. lactis AD011]
 gi|240249059|gb|ACS45999.1| Carbamoylphosphate synthase large subunit [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240250627|gb|ACS47566.1| Carbamoylphosphate synthase large subunit [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|289178405|gb|ADC85651.1| Carbamoyl-phosphate synthase large chain [Bifidobacterium animalis
           subsp. lactis BB-12]
 gi|295793656|gb|ADG33191.1| Carbamoylphosphate synthase large subunit [Bifidobacterium animalis
           subsp. lactis V9]
          Length = 1136

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 27/201 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+ ++   +     S+  A  A   +  P+ V  S +  GGRG        A  +  
Sbjct: 682 EVLRQEHLNAPRFGTALSLEEAREAAHNIGYPVLVRPSYVL-GGRGM-EIVYDDAQLETY 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    S     + +   L S L+  +       ++     D      ELY+  +++    
Sbjct: 740 VNRALSEAKADTVVSGRLPSPLLIDKFLQDAIEIDV----DALFDGEELYIGGIMEH--- 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                        IEE           L   P   ++ + +  L +       A+     
Sbjct: 793 -------------IEEAGVHSGDAACTL---PPSTLSDDQIRRLREAT--LAIAKGCQVR 834

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  AF    + ++E NP
Sbjct: 835 GLMNVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++++     A+  +  ++   ++  +    PL V         R       L +    
Sbjct: 133 KKVVKEAGAESARSDIAHTLEEVDAIAERFGFPLVV---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +    + +                 G   S  + V +E+G +  +E  L L+ DR  
Sbjct: 181 ---IAHDTEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELMRDRND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
                +      +D   V       I    + P+  +T  +   L D+
Sbjct: 227 N--VVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 267


>gi|312898400|ref|ZP_07757790.1| phosphoribosylamine--glycine ligase [Megasphaera micronuciformis
           F0359]
 gi|310620319|gb|EFQ03889.1| phosphoribosylamine--glycine ligase [Megasphaera micronuciformis
           F0359]
          Length = 425

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY VP A   + +   AA++ I+    P+ V+K+   A G+             
Sbjct: 106 AKNLMKKYGVPTAAYEIFTDKEAAKAYIEKQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++K     +  ++   +  +  G        + VE+   +  E  L   VD  
Sbjct: 152 -GVVVAQTVKDATDAVDAMMKDRIFGESGG-------QIVVEECM-VGEEASLLAFVDGK 202

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 203 TIVPMVAA 210


>gi|310287765|ref|YP_003939023.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           bifidum S17]
 gi|311064651|ref|YP_003971376.1| carbamoyl-phosphate synthase large chain [Bifidobacterium bifidum
           PRL2010]
 gi|309251701|gb|ADO53449.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           bifidum S17]
 gi|310866970|gb|ADP36339.1| CarB Carbamoyl-phosphate synthase large chain [Bifidobacterium
           bifidum PRL2010]
          Length = 1126

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 64/201 (31%), Gaps = 27/201 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+ ++   +     S+  A  A   +  P+ V  S +  GGRG        A     
Sbjct: 682 EVLRREHMNAPRYGTALSLEEAREAAHNIGYPVLVRPSYVL-GGRGM-EIVYDDAQLTKY 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V          + +   L S L+  +       ++     D      ELY+  +++    
Sbjct: 740 VNRALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDV----DALFDGEELYIGGIMEH--- 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                        IEE           L   P   ++ + +  L +       ++  G  
Sbjct: 793 -------------IEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAISKGCGVK 834

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  AF    + ++E NP
Sbjct: 835 GLINVQYAFMANTLYVIEANP 855



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  V  S+   ++    L  PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSEVAHSMKEVDAVAAELGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +       L  +             + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGAGLHYS-----------PTDEVLLEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|146412624|ref|XP_001482283.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 557

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 72/225 (32%), Gaps = 45/225 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL ++ ++P+A+ + + +V  A +A K++  P+ V         R       L +   
Sbjct: 190 AKAL-KEIDIPIAESIAVETVDDALAAAKSVGYPIIV---------RSAYSLGGLGSG-- 237

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                 ++ + +       L             S    + VE      +E+   ++ DR 
Sbjct: 238 ----FAANEEELRDLSSRSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRV 280

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
              +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 281 GNCITV-------CNMENFDPLGVHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVV 333

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           G+  +        L Y+   + +  L   + L     G      +
Sbjct: 334 GECNVQYSLQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 377


>gi|322410842|gb|EFY01750.1| phosphoribosylamine--glycine ligase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 420

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I     P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYQVPTADYGTFSDFEEAKAYILEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  ++   +    E+L    +  Q G +G+RV
Sbjct: 153 -GVVVAETVDQAVEAAHEML----LGNQFGDSGARV 183


>gi|260220382|emb|CBA27866.1| Cyanophycin synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 602

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +     A +A + +  P+ VVK   + G +GKG    + +  + 
Sbjct: 196 KKLLSAAGVPVPGGRSVIDAEDAWAAAQEIGLPV-VVKP--NDGNQGKGVTVNITSKEQL 252

Query: 69  GVRVESSLK 77
                 + +
Sbjct: 253 LKAFAVAKE 261


>gi|85375370|ref|YP_459432.1| phosphoribosylamine--glycine ligase [Erythrobacter litoralis
           HTCC2594]
 gi|84788453|gb|ABC64635.1| phosphoribosylamine-glycine ligase [Erythrobacter litoralis
           HTCC2594]
          Length = 426

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 31/218 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +  +P A  V  +S+  A  A++    P +V+K+   A G+              
Sbjct: 107 KDLCERAGIPTAGYVRTTSLDEATQALERFEAP-HVLKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  + +   + + ++ G      Q G  G+ V    +E+        + +L      
Sbjct: 152 GVVIAETREDAQAALADMFG-----GQFGEAGAEV---VIEEFMAGEEASFFALTDGTA- 202

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLELQ-GQARID 186
             +  I + Q    I +     P         P   +T +     + +++E      R +
Sbjct: 203 --IVPIGTAQDHKRIGDGDVG-PNTGGMGAYSPAPILTDDLQARVMAEIIEPTVTTLREE 259

Query: 187 GGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVL 222
           G      LY      +    L+E N        ++ ++
Sbjct: 260 GMPYSGVLYAGLMLTETGPKLIEYNARFGDPECQVLMM 297


>gi|13542064|ref|NP_111752.1| Acyl-CoA synthetase (NDP forming) [Thermoplasma volcanium GSS1]
 gi|14325495|dbj|BAB60399.1| succinyl CoA synthetase alpha subunit [Thermoplasma volcanium GSS1]
          Length = 693

 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 77/229 (33%), Gaps = 22/229 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E ++K +  +Y + V K  +  S        +    P+ V K Q             
Sbjct: 481 SLSELESKKIFSEYGINVNKTELARSKDDLMKIAQEFKYPV-VAKIQ--------SPDVI 531

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
              D  G +   S+   ++    +I+ +            R++ + VE+      E  + 
Sbjct: 532 HKTDVGGVILNISNSDELLKAYDDIISNVKKNVPNA----RIDGIVVEEMLKGDLETIIG 587

Query: 122 LLVDRTSGMVAFIASTQGG--MDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
            + D  +     +    G     +E+V+        K   D    +       L      
Sbjct: 588 TIND-PTFGPTVMFGLGGTAVQVLEDVSFRMAPVCKKEAYDM---INETIAGKLMKEFRG 643

Query: 180 QGQARIDGG--DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
           +G   ID     +    +  +   ++  ++ NP+I+   G   V+D++I
Sbjct: 644 RGPLDIDAVVDQIVRFSWLEYDHPEIKGVDANPMIVSTKG-ATVVDARI 691



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%)

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV------NGAGLAMATMDIIKLYG-- 290
           I+EL D+S   S +   K  NL  +   G IG +       +G  L   + D+       
Sbjct: 275 IEELFDLSLTLSLQKPMKGDNLIVVTNGGGIGVLATDQAEASGLPLQTPSNDLQGKIKQI 334

Query: 291 ----GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD--VLVKGILS 344
               G+  N +D+   A     A   K +  D SV G+++ ++  +   D     KGI++
Sbjct: 335 IPSFGSTKNPIDMSAMATPQIYADTIKTVMEDESVDGLVV-LYCEVANLDPSDAAKGIIN 393

Query: 345 AVKEVKINIPLVM-RLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            V      IP+V   + G N    +  + ++G+   T    D A + I    K
Sbjct: 394 GVLSSNRKIPVVAGFVGGENSINASLYLIKNGIP--TFDSPDKAVKAISALRK 444


>gi|284030863|ref|YP_003380794.1| phosphoribosylglycinamide synthetase [Kribbella flavida DSM 17836]
 gi|283810156|gb|ADB31995.1| phosphoribosylglycinamide synthetase [Kribbella flavida DSM 17836]
          Length = 423

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 20/102 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L ++ VP  + V++ +V  A    + L  P+ ++K +  A              +  GV 
Sbjct: 121 LAEHGVPQPESVLVDTVDEALVTAEKLGYPV-ILKPRALA--------------ASLGVV 165

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
             +S   + +       +   T    P       V VE+ AD
Sbjct: 166 KVNSADELRA---NWAFAHDTTVPEAPHYDV--KVLVEEFAD 202


>gi|254432413|ref|ZP_05046116.1| carbamoyl-phosphate synthase, large subunit [Cyanobium sp. PCC
           7001]
 gi|197626866|gb|EDY39425.1| carbamoyl-phosphate synthase, large subunit [Cyanobium sp. PCC
           7001]
          Length = 1113

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  V V    + +++  AE+    +     +++     GG G G           
Sbjct: 133 KQAMEKIGVAVCPSGIANNLEEAEAVGDAIGSYPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFRAFCK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|228474952|ref|ZP_04059680.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus hominis
           SK119]
 gi|228270937|gb|EEK12325.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus hominis
           SK119]
          Length = 1057

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK +VP  KG   +S   A    + +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKIDVPQPKGKTATSPKEALENAREIGYPVVVRPSYVLGG 714


>gi|91778208|ref|YP_553416.1| putative acyl-CoA synthetase [Burkholderia xenovorans LB400]
 gi|91690868|gb|ABE34066.1| Putative acyl-CoA synthetase [Burkholderia xenovorans LB400]
          Length = 709

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 68/226 (30%), Gaps = 24/226 (10%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL ++Y VPV  G V      A         P+ V+K                     
Sbjct: 502 SKALFQQYGVPVNAGSVALDADEAVRCATRTGFPV-VMKIV-------SPDIVHKSDVGG 553

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V V        +  R +  +     +    G  V        A +  EL L +   R 
Sbjct: 554 VAVGVADEPAVRDTYARLLANARRAVPEARIEGISVQ-------AQVKGELELIIGARRD 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQ--AR 184
           +     I    GG+ +E +A    + I          +   +   +  +L   +G   A 
Sbjct: 607 AQFGPIIVFGAGGVLVELLA---QRAIASAPAGADRVLALLETLPIWKILDGYRGGRLAV 663

Query: 185 IDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
               D    +     D      E  INPLI+ K      +D ++  
Sbjct: 664 DQVVDAIVRVSWLAADLGERDFELDINPLIVGKTACW-AVDGRLRI 708


>gi|21674410|ref|NP_662475.1| carbamoyl-phosphate synthase, large subunit [Chlorobium tepidum
           TLS]
 gi|21647592|gb|AAM72817.1| carbamoyl-phosphate synthase, large subunit [Chlorobium tepidum
           TLS]
          Length = 618

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 38/202 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL K ++P  +    ++   A+     +  P+ V  S +  G                 
Sbjct: 214 ALLEKLDIPHPEYGTATTFAEAQEITNRIGYPVLVRPSYVLGG---------------RA 258

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  +  S+   + + L  T    +  P       + ++   +   E  +  L D T  
Sbjct: 259 MKIIYNDDSLKEYVDQALFIT----EKYP-------LLIDRFLETAVEFDIDALADSTDC 307

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGG 188
           +++ I        I          +    IDP  I    E    L + + + G   +   
Sbjct: 308 VISGIMQHVEAAGIHSGDSTS--ILPYYNIDPAAIATMKEYTRKLAEHIGVIGLMNVQYA 365

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
                +Y         ++E+NP
Sbjct: 366 VQNGKVY---------VIEVNP 378


>gi|224283412|ref|ZP_03646734.1| Carbamoylphosphate synthase large subunit [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313140567|ref|ZP_07802760.1| CarB [Bifidobacterium bifidum NCIMB 41171]
 gi|313133077|gb|EFR50694.1| CarB [Bifidobacterium bifidum NCIMB 41171]
          Length = 1126

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 64/201 (31%), Gaps = 27/201 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+ ++   +     S+  A  A   +  P+ V  S +  GGRG        A     
Sbjct: 682 EVLRREHMNAPRYGTALSLEEAREAAHNIGYPVLVRPSYVL-GGRGM-EIVYDDAQLTKY 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V          + +   L S L+  +       ++     D      ELY+  +++    
Sbjct: 740 VNRALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDV----DALFDGEELYIGGIMEH--- 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                        IEE           L   P   ++ + +  L +       ++  G  
Sbjct: 793 -------------IEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAISKGCGVK 834

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  AF    + ++E NP
Sbjct: 835 GLINVQYAFMANTLYVIEANP 855



 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  V  S+   ++    L  PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSEVAHSMKEVDAVAAELGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +       L  +             + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGAGLHYS-----------PTDEVLLEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|126178940|ref|YP_001046905.1| carbamoyl phosphate synthase large subunit [Methanoculleus
           marisnigri JR1]
 gi|167006444|sp|A3CU73|CARB_METMJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|125861734|gb|ABN56923.1| carbamoyl-phosphate synthase large subunit [Methanoculleus
           marisnigri JR1]
          Length = 1056

 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 41/214 (19%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q + L+     PV + +++  ++  + AI+ +  P  +  +    G             S
Sbjct: 129 QFRDLMNAIGEPVPRSMILEHMNQIDEAIREVGLPAIIRPAYTLGG-------------S 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV    + + +                 G   SR++ V VE+     +E+   ++  R
Sbjct: 176 GGGV--AHTPEEMRRICE-----------LGLARSRIHQVLVEESVAGWKEIEFEVM--R 220

Query: 127 TSGMVAFIASTQGGMD---IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            +     I      +D   I          I  L  D    + +     +   L++QG  
Sbjct: 221 DAADTCIIVCGMENVDPMGIHTGESVVVAPILTLRDDEFQTLRTA-AIKIIRALDVQGGC 279

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            I           A+ D D  ++E+NP +   + 
Sbjct: 280 NIQF---------AYKDGDYRIIEVNPRVSRSSA 304


>gi|290476235|ref|YP_003469135.1| putative acyl-CoA synthetase , ATP-binding [Xenorhabdus bovienii
           SS-2004]
 gi|289175568|emb|CBJ82371.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding
           [Xenorhabdus bovienii SS-2004]
          Length = 880

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      +  +   A +  + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLNTLPTWIAYTSDDAVNIAEKIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V +  + I+      KQ  P  +R++ ++V+  A+    +EL
Sbjct: 530 SHKSEVQGVMLYLRNSDEVKTSAQAIIDRV---KQNFPQ-ARIHGLFVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDI 143
            +++  D   G +  +   +GG+D 
Sbjct: 586 RVAIEQDEIFGPLIMLG--EGGIDW 608


>gi|124026472|ref|YP_001015587.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           NATL1A]
 gi|123961540|gb|ABM76323.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           NATL1A]
          Length = 434

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL+ + N+P AK     S   A   +K    P  V+K+   A G+             
Sbjct: 118 SKALMIENNIPTAKYWSAKSKEEALEILKRFNQP-LVIKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++     I++I      + + G  G   N V +E+  +
Sbjct: 164 -GVTVCETIEESKEAIKDIF-----SGKFGSAG---NKVILEEKIE 200


>gi|315503233|ref|YP_004082120.1| carbamoyl-phosphate synthase, large subunit [Micromonospora sp. L5]
 gi|315409852|gb|ADU07969.1| carbamoyl-phosphate synthase, large subunit [Micromonospora sp. L5]
          Length = 1115

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 52/176 (29%), Gaps = 42/176 (23%)

Query: 9   KALLRKYNVP---------VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           K ++ K  V          V +  V  S+      +  L  P+ +         R     
Sbjct: 133 KEIVAKAGVRLGLDDPSALVPRSRVCHSMDEVRETVADLGLPVVI---------RPSFTM 183

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +       +  + + +       L ++            V+ V +E+     +E  
Sbjct: 184 GGLGSG------MAHTGEDLERIAGSGLAAS-----------PVHEVLIEESVLGWKEYE 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           L L+ DR   +V           IE V          + + P + +T  +   L D
Sbjct: 227 LELMRDRHDNVVVV-------CSIENVDPMGVHTGDSVTVAPSMTLTDREYQRLRD 275



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 23/68 (33%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L +  +      + +S   A++    +  P+ V  S +  G   +  + +       G
Sbjct: 697 AVLARAGLRAPAHGMATSYDEAKAIADEIGYPVLVRPSYVLGGRGMEIVYDDATLRDYIG 756

Query: 70  VRVESSLK 77
                S  
Sbjct: 757 RATAISPD 764


>gi|161344753|ref|NP_442333.2| carbamoyl phosphate synthase large subunit [Synechocystis sp. PCC
           6803]
 gi|22095495|sp|Q55756|CARB_SYNY3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1081

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPV    + SS+  A      +     +++                 A + G
Sbjct: 133 KEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLIIRP------------AFTLAGTGG 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + +     +           Q G   S ++ + VE      +E  L ++ D  +
Sbjct: 181 GI--AYNQEEYEEMV-----------QYGLDQSPMSQILVEKSLLGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|255321830|ref|ZP_05362980.1| carbamoyl-phosphate synthase, large subunit [Campylobacter showae
           RM3277]
 gi|255300934|gb|EET80201.1| carbamoyl-phosphate synthase, large subunit [Campylobacter showae
           RM3277]
          Length = 1115

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + +      +  A +A   +  PL +  S    G                
Sbjct: 131 KKAMQKIGMDLPQSQYAYDMDEALAAAANIGFPLIIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++                  QTG   S ++ + VE+     +E  + ++ DR  
Sbjct: 176 GSGVAYNIDEFKELA-----------QTGLDASPIHEILVEESLLGWKEYEMEVIRDRND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++  ++ D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQAMRDA 265


>gi|226365191|ref|YP_002782974.1| acyl-CoA synthetase [Rhodococcus opacus B4]
 gi|226243681|dbj|BAH54029.1| putative acyl-CoA synthetase [Rhodococcus opacus B4]
          Length = 687

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 69/227 (30%), Gaps = 30/227 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ LL    V   +G V+ +   A      L  P +V+K+         G         +
Sbjct: 481 ARELLTALGVTFPEGGVVRTAEEASELAGRLRAP-FVLKASWLEHKSESGGVVVGIDGPE 539

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +R    + +        LG      +   T   V  + V    D              
Sbjct: 540 RLLRTFHDMHA-------RLGDGEYVLEEQDTRQDVVEILVGGRRDPD------------ 580

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQA 183
                 +    GG + E +     +      +DP   +   +      +L         +
Sbjct: 581 -LGPVIVV-GAGGTETEVLQDITLEAA---PVDPGAALAMLERLRCMPLLRGWRGRPAVS 635

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
                ++   + +   ++ D++ +E+NP+ +   G L V    ++ D
Sbjct: 636 VDGLVEVITAVSRLISERPDIAEVELNPVRVAPGGALTVDALVVAAD 682


>gi|254384905|ref|ZP_05000241.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces sp. Mg1]
 gi|194343786|gb|EDX24752.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces sp. Mg1]
          Length = 408

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 69/267 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP  +  ++S    A +  + + G   ++K+ +  G  GK            GV 
Sbjct: 139 LDEIGVPSPRHRIVSDPADAAAFAEEVGGFPVILKT-VRGGYDGK------------GVW 185

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
              + +   +  +               G  V     E+  D +REL  +++      + 
Sbjct: 186 FVRTPEDAEAPFK--------------AGVPV---LAEEKVDYVRELAANIVRSPHGQAV 228

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               + S Q     + V    P        + L G        +   L + G   ++   
Sbjct: 229 AYPVVESVQVDGVCDTVIAPAPNLS-----EALAGEAQALALRIAQELGVTGHLAVE--- 280

Query: 190 LFPNLYKAFCDKDMSLLEINPLII--------MKNGRL---RVLDSKISFDDNALYRHLD 238
                   F   D  +L +N L +         ++G +        +   D         
Sbjct: 281 -------LFETTDGRIL-VNELAMRPHNSGHWTQDGAITSQFANHVRAVLD--------- 323

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL 265
              L D        + A      Y  +
Sbjct: 324 -LPLGDPRPRARWTVMANVLGGDYPDM 349


>gi|332229495|ref|XP_003263923.1| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           isoform 1 [Nomascus leucogenys]
 gi|332229497|ref|XP_003263924.1| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           isoform 2 [Nomascus leucogenys]
 gi|332229499|ref|XP_003263925.1| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           isoform 3 [Nomascus leucogenys]
          Length = 1010

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     ++EI    +  K  G  G     + +E+  D      L     R
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLDGEEVSCLCFTDGR 207


>gi|284051849|ref|ZP_06382059.1| acetyl-CoA carboxylase biotin carboxylase subunit [Arthrospira
           platensis str. Paraca]
 gi|291571309|dbj|BAI93581.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Arthrospira
           platensis NIES-39]
          Length = 453

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++ VP   G   ++++  AA+   + +  P+ ++K+    GGR           
Sbjct: 120 AKETMQRFGVPTIPGSEGLVTNDKAAQKIAQKIGYPV-IIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S + +       L S    +     G+    +Y+E   +  R +   +L D
Sbjct: 168 ---GMRLVRSAEELPK-----LFSAAQGEAEAAFGNP--GLYIEKFIECPRHIEFQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     ++P +     E        +   G   
Sbjct: 218 GFGN---VIHLGERDCSIQRRHQKLLEEAPSPALNPELRRKMGEAAVKAAASINYTGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           ++   D     Y  F + +  +   +P+  M  G
Sbjct: 275 VEFLLDRHGKFY--FMEMNTRIQVEHPVTEMITG 306


>gi|225182006|ref|ZP_03735438.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Dethiobacter alkaliphilus AHT 1]
 gi|225167291|gb|EEG76110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Dethiobacter alkaliphilus AHT 1]
          Length = 707

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 80/232 (34%), Gaps = 37/232 (15%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
             Y +PVA   + +S   A      L  P  V+K             K +     GGV++
Sbjct: 498 EAYGIPVAPVRLATSPEEAAELADKLGYP-AVLKV---------ASPKIMHKTDVGGVKI 547

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
                    ++ E   + + + +    G+ +  + V+       EL + +   R      
Sbjct: 548 GL---ETRDEVMEGYHAIMNSVRRLMPGTPIYGIEVQKMMPKGDELIIGM--SRDVQFGP 602

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------ELQGQARI 185
            +A   GG+        Y   +  +      G+T E++  +             +G    
Sbjct: 603 LLAFGLGGI--------YVNLLKDVSFRLAAGLTLEEIEEMIAETKAYSLIRGYRGSKPA 654

Query: 186 DGGDLFPNLYKAFC-DKDM---SLLEINPLIIMKNGRLRVLDSKISF--DDN 231
           D G L   L +      D    + +++NP+I   +  +  LD KI+   D+N
Sbjct: 655 DIGALVQTLARVARLSLDFPEITEIDLNPVIAYPDSAV-ALDVKITVSYDEN 705


>gi|209523217|ref|ZP_03271773.1| acetyl-CoA carboxylase, biotin carboxylase [Arthrospira maxima
           CS-328]
 gi|209496368|gb|EDZ96667.1| acetyl-CoA carboxylase, biotin carboxylase [Arthrospira maxima
           CS-328]
          Length = 453

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++ VP   G   ++++  AA+   + +  P+ ++K+    GGR           
Sbjct: 120 AKETMQRFGVPTIPGSEGLVTNDKAAQKIAQKIGYPV-IIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S + +       L S    +     G+    +Y+E   +  R +   +L D
Sbjct: 168 ---GMRLVRSAEELPK-----LFSAAQGEAEAAFGNP--GLYIEKFIECPRHIEFQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     ++P +     E        +   G   
Sbjct: 218 GFGN---VIHLGERDCSIQRRHQKLLEEAPSPALNPELRRKMGEAAVKAAASINYTGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           ++   D     Y  F + +  +   +P+  M  G
Sbjct: 275 VEFLLDRHGKFY--FMEMNTRIQVEHPVTEMITG 306


>gi|225181552|ref|ZP_03734994.1| cyanophycin synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167800|gb|EEG76609.1| cyanophycin synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 898

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
            LLR   +PV    V+ ++  A++A + +  P+ V+K     G +GKG
Sbjct: 220 DLLRNEGLPVPASEVVYTLADAQAAAERIGYPV-VIKPD--NGNQGKG 264


>gi|332077300|gb|EGI87762.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA17545]
          Length = 388

 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A+K +  P+ + K     G R    FK    D   
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM-IAKPD--NGVRAAATFKLETEDDIN 173

Query: 69  GVRVESS 75
             + E  
Sbjct: 174 HFKQEWD 180


>gi|1001668|dbj|BAA10403.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
           [Synechocystis sp. PCC 6803]
          Length = 1105

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  VPV    + SS+  A      +     +++                 A + G
Sbjct: 157 KEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLIIRP------------AFTLAGTGG 204

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + +     +           Q G   S ++ + VE      +E  L ++ D  +
Sbjct: 205 GI--AYNQEEYEEMV-----------QYGLDQSPMSQILVEKSLLGWKEYELEVMRD-LA 250

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE            + + P   +T ++   L D
Sbjct: 251 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRLRD 291


>gi|189501001|ref|YP_001960471.1| Glutathione synthase [Chlorobium phaeobacteroides BS1]
 gi|189496442|gb|ACE04990.1| Glutathione synthase [Chlorobium phaeobacteroides BS1]
          Length = 646

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 11/100 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +PV+   + +++     A + L  P+ V  + + AG                G
Sbjct: 225 KMLRQAGLPVSDSKIATTLDRTLRAAEELGYPVVVKPADLDAG-----------KGVSAG 273

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
           +     +    +  +++  + L+ K       RV     E
Sbjct: 274 LLNPEEVTRAFNAAQKLSRNILVEKHFEGRDYRVTVFQNE 313


>gi|262091722|gb|ACY25312.1| carbamoyl-phosphate synthase large subunit [uncultured
           actinobacterium]
          Length = 1098

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 79/265 (29%), Gaps = 33/265 (12%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +  + V +  V  ++  AE     +  P+ +  + I  GGRG G              + 
Sbjct: 139 EIGLKVPRSGVAHNMQEAEKVCLQIGLPIIIRPAYIL-GGRGTG--------------IA 183

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            + +                   G   S +  + +E+     +E  L ++ D+       
Sbjct: 184 HTPEEFTRLAAN-----------GIAASPIGEILIEESIAGWKEYELEVMRDKADNC-VI 231

Query: 134 IASTQ--GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ-GQARIDGGDL 190
           I S +    M +             L  D    V  +   +    + ++ G + +     
Sbjct: 232 ICSIENVDPMGVHTGDSITVAPAMTLS-DVEYQVMRDAAFACIRRVGVETGGSNVQFAVN 290

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLDIQELRDVS-EE 248
             N  +   + +  +   + L     G     + +K++          DI ++   S E 
Sbjct: 291 PKNGDQVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEISNDITKMTPASFEP 350

Query: 249 DSREIEAKQHNLSYIALDGNIGCMV 273
               +  K    ++    G  G + 
Sbjct: 351 TIDYVVTKVPRWAFEKFPGASGVLG 375


>gi|219849332|ref|YP_002463765.1| carbamoyl-phosphate synthase large subunit [Chloroflexus aggregans
           DSM 9485]
 gi|219543591|gb|ACL25329.1| carbamoyl-phosphate synthase, large subunit [Chloroflexus aggregans
           DSM 9485]
          Length = 1096

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 52/163 (31%), Gaps = 33/163 (20%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +  + V +    +++  A + +     P  +  S    G  G                + 
Sbjct: 138 EIGLQVPRSGTATTLDEALAVVAQTGFPAIIRPSFTLGGEGG---------------GIA 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            +++   + +   L ++            V+ V +E+     +E  L ++ DR       
Sbjct: 183 YNMEEFRAIVERGLDAS-----------PVSQVLIEESVLGWKEFELEVMRDRNDNG-VI 230

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           I S      IE +          + + P + +T  +   + DM
Sbjct: 231 ICS------IENIDPMGVHTGDSITVAPAMTLTDREYERMRDM 267



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           ALL++ N+P  +    +S   A S  + +  P+ V  S +  GGR   
Sbjct: 684 ALLKELNIPAPEHGSATSWEEALSVARRIGYPVVVRPSYVL-GGRAMA 730


>gi|323490417|ref|ZP_08095629.1| phosphoribosylamine--glycine ligase [Planococcus donghaensis
           MPA1U2]
 gi|323395916|gb|EGA88750.1| phosphoribosylamine--glycine ligase [Planococcus donghaensis
           MPA1U2]
          Length = 416

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A     +    A   I+    P+ V+K+   A G+             
Sbjct: 106 AKELMKKYDIPTAGYETFTETAPAIDFIRQHGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  ++ I ++L      ++ G +G   + V +E+  D     ++S +    
Sbjct: 152 -GVVVAMTEEEAVAAINDMLE----GQKFGDSG---SKVVIEEFLDGEEFSFMSFVYSGQ 203

Query: 128 SGMVAF 133
              +  
Sbjct: 204 IYPIVI 209


>gi|257055589|ref|YP_003133421.1| carbamoyl-phosphate synthase large subunit [Saccharomonospora
           viridis DSM 43017]
 gi|256585461|gb|ACU96594.1| carbamoyl-phosphate synthase large subunit [Saccharomonospora
           viridis DSM 43017]
          Length = 1111

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++R     V +  V  S+      +  L  P+ +         R       L +    
Sbjct: 138 KDIVRAVGGGVPRSAVCHSMEEVRETVAELGLPVVI---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +                 G   S V  V +E+     +E  L L+ DR  
Sbjct: 186 ---MAHTPEELERMAS-----------IGLEESPVTEVLIEESVLGWKEYELELMRDRND 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE +          + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENIDPMGVHTGDSVTVAPAMTLTDREYQHMRD 271



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K  + +S   A      +  P+ V  S +  GGRG
Sbjct: 691 EVLAAAGLPAPKYGMATSFDGARRIADEIGYPVLVRPSYVL-GGRG 735


>gi|226530106|ref|NP_001147908.1| phosphoribosylamine--glycine ligase [Zea mays]
 gi|195614514|gb|ACG29087.1| phosphoribosylamine--glycine ligase [Zea mays]
          Length = 520

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    +    A+  +K    P+ VVK+   A G+              
Sbjct: 195 KKLCDKYNIPTAKYRTFTDAVEAKKYVKNEGAPI-VVKADGLAAGK-------------- 239

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      I  +L    +    G  GS V    +E+  +     + +L+ D T+
Sbjct: 240 GVVVAMTLDEAFEAIDSML----VEGSFGSAGSLV---IIEEFLEGEEASFFALV-DGTN 291

Query: 129 GMVA 132
            +  
Sbjct: 292 ALPL 295


>gi|161502246|ref|YP_001569358.1| hypothetical protein SARI_00274 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863593|gb|ABX20216.1| hypothetical protein SARI_00274 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 886

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 84/271 (30%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      +      A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIAGDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              +D +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSDVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L     +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALHPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D ++  R      +R    +    +E K  +
Sbjct: 698 DGDSESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|89900108|ref|YP_522579.1| cyanophycin synthetase [Rhodoferax ferrireducens T118]
 gi|89344845|gb|ABD69048.1| Cyanophycin synthetase [Rhodoferax ferrireducens T118]
          Length = 858

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  + +   A  A   +  P+ VVK +  +G +GKG    + +  +
Sbjct: 209 KKLLAAAGVPVPLGREVDTPEDAWMAACEVGLPV-VVKPK--SGNQGKGVTVNITSREQ 264


>gi|312132389|ref|YP_003999728.1| carb [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772601|gb|ADQ02089.1| CarB [Bifidobacterium longum subsp. longum BBMN68]
          Length = 1127

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +    K +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDKQLNKYVDRALAE--AKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|284005128|ref|NP_001164891.1| trifunctional purine biosynthetic protein adenosine-3 [Oryctolagus
           cuniculus]
 gi|218456206|gb|ACK77498.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase isoform 1
           (predicted) [Oryctolagus cuniculus]
          Length = 1010

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 21/103 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTARWRAFTTPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V  + +     ++EI    +  K  G  G     + +E+
Sbjct: 157 -GVIVAKNQEEACRAVQEI----MQEKAFGAAG---ETIVIEE 191


>gi|212712920|ref|ZP_03321048.1| hypothetical protein PROVALCAL_04018 [Providencia alcalifaciens DSM
           30120]
 gi|212684398|gb|EEB43926.1| hypothetical protein PROVALCAL_04018 [Providencia alcalifaciens DSM
           30120]
          Length = 881

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 84/226 (37%), Gaps = 33/226 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +  S   A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILKAYGLNSLPTWIAHSSEQAVEIAEKIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    + K V      I+              R+  + V+  A+    +EL
Sbjct: 531 VHKSEVQGVMLYLRNAKEVAEAADAIIERVSTNFPQA----RIEGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYP-------QKIFKLLIDPLIGVTSEDVA 171
            +++ +D   G++  +   +GG++ ++ ++               L+I+ + G       
Sbjct: 587 RIAVELDPVFGLLIMLG--EGGIEWQQESQAAVALPPLNLALARYLVINAIKGHKI-KAR 643

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           S  + L++ G        L   +     D  ++S L+I+PL+   +
Sbjct: 644 SALEPLDIPG-----LASLLVRVSNLIIDCPNISRLDIHPLLAAGD 684


>gi|170078015|ref|YP_001734653.1| phosphoribosylamine--glycine ligase [Synechococcus sp. PCC 7002]
 gi|169885684|gb|ACA99397.1| phosphoribosylamine--glycine ligase [Synechococcus sp. PCC 7002]
          Length = 424

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 18/112 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK L+ +  VP A     ++  AA+  I+T   P+   VVK+   A G+           
Sbjct: 108 AKDLMNEAGVPTAAAGTFNNPQAAKDYIQTQGAPIVPIVVKADSLAAGK----------- 156

Query: 66  SKGGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGADIL 115
              GV V  +L+  ++ +  +   G   +  +    G  V+ + + DG  I 
Sbjct: 157 ---GVIVAETLEEALNAVDRLWAEGYKTLVVEEFLVGQEVSVLALTDGKTIR 205


>gi|73542551|ref|YP_297071.1| acetyl-CoA carboxylase biotin carboxylase subunit [Ralstonia
           eutropha JMP134]
 gi|72119964|gb|AAZ62227.1| Acetyl-CoA carboxylase, biotin carboxylase [Ralstonia eutropha
           JMP134]
          Length = 450

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 115/340 (33%), Gaps = 59/340 (17%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +        +A + +  P+ +  +                 
Sbjct: 119 AKQAMIKAGVPCVPGSEGALPDDPAEIVAAARRVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPE----------VYMEKFLENPRHVEIQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQA 183
           D+    +      +    ++   +   ++     I   LI    +  A  C  +  +G  
Sbjct: 217 DQHKQAIWL---GERDCSMQRRHQKVIEEAPAPHIPRRLIERIGDRCAEACRKMGYRGAG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
             +           + + +   +E+N       P+  M  G  +     +I+F +   YR
Sbjct: 274 TFEF---------LYENNEFYFIEMNTRVQVEHPVTEMITGIDIVQEQIRIAFGEKLRYR 324

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGAP 293
             D+Q  R  + E     E       +I   G I    M  G G+ + +      +   P
Sbjct: 325 QKDVQ-FRGHAIECRVNAE---DPFKFIPSPGRITAWHMPGGPGVRVDSHAYDGYF--VP 378

Query: 294 ANF-----LDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
            N+       +  GA +++  A  +I  S+  V GI  N+
Sbjct: 379 PNYDSMIGKIITYGATREQAIARMRIALSEMVVDGIQTNV 418


>gi|163847334|ref|YP_001635378.1| carbamoyl-phosphate synthase large subunit [Chloroflexus
           aurantiacus J-10-fl]
 gi|222525180|ref|YP_002569651.1| carbamoyl-phosphate synthase large subunit [Chloroflexus sp.
           Y-400-fl]
 gi|163668623|gb|ABY34989.1| carbamoyl-phosphate synthase, large subunit [Chloroflexus
           aurantiacus J-10-fl]
 gi|222449059|gb|ACM53325.1| carbamoyl-phosphate synthase, large subunit [Chloroflexus sp.
           Y-400-fl]
          Length = 1097

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 33/163 (20%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +  + V +    +++  A + +     P  +  S    G  G                + 
Sbjct: 138 EIGLQVPRSGTATTLEEALAIVAQTGFPAIIRPSFTLGGEGG---------------GIA 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            +++   + +   L ++            V+ V VE+     +E  L ++ DR       
Sbjct: 183 YNMEEFRTIVERGLDAS-----------PVSQVLVEESVLGWKEFELEVMRDRNDNG-VI 230

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           I S      IE +          + + P + +T  +   + DM
Sbjct: 231 ICS------IENIDPMGVHTGDSITVAPAMTLTDREYQRMRDM 267



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           ALL++ N+P  +    +S   A +  + +  P+ V  S +  GGR   
Sbjct: 684 ALLKELNIPAPEHGSATSWEEALTVARRIGYPVVVRPSYVL-GGRAMA 730


>gi|309811809|ref|ZP_07705583.1| cyanophycin synthase (L-aspartate-adding) [Dermacoccus sp.
           Ellin185]
 gi|308434230|gb|EFP58088.1| cyanophycin synthase (L-aspartate-adding) [Dermacoccus sp.
           Ellin185]
          Length = 944

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 15/77 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    +PV K  V+ +   A  A + +  P+ V               K L  +   G
Sbjct: 238 DLLGSAGLPVPKSEVVRTREGAIQAAREIGFPVVV---------------KPLDGNHGRG 282

Query: 70  VRVESSLKSVISDIREI 86
           V ++ +    +S+  +I
Sbjct: 283 VCLDLTDDEAVSEAYDI 299


>gi|269976290|ref|ZP_06183286.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris 28-1]
 gi|269935619|gb|EEZ92157.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris 28-1]
          Length = 508

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A GV  S++  A +A++    P YVVK    A G+G
Sbjct: 106 AKEVMTAAGVPTAAGVACSTLAEARAALQRFGAP-YVVKQDGLAAGKG 152


>gi|219885115|gb|ACL52932.1| unknown [Zea mays]
 gi|219885235|gb|ACL52992.1| unknown [Zea mays]
          Length = 520

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    +    A+  +K    P+ VVK+   A G+              
Sbjct: 195 KKLCDKYNIPTAKYRTFTDAVEAKKYVKNEGAPI-VVKADGLAAGK-------------- 239

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      I  +L    +    G  GS V    +E+  +     + +L+ D T+
Sbjct: 240 GVVVAMTLDEAFEAIDSML----VEGSFGSAGSLV---IIEEFLEGEEASFFALV-DGTN 291

Query: 129 GMVA 132
            +  
Sbjct: 292 ALPL 295


>gi|160943238|ref|ZP_02090474.1| hypothetical protein FAEPRAM212_00724 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445477|gb|EDP22480.1| hypothetical protein FAEPRAM212_00724 [Faecalibacterium prausnitzii
           M21/2]
          Length = 474

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK             I+       V+K+   A G+             
Sbjct: 148 SKDLMKKYGIPTAKYETFDDPAKVMDYIRAEGKYPVVIKADGLALGK------------- 194

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +     ++EI    ++ K+ G +G   N V VE+  
Sbjct: 195 -GVLICENEQQAADGVKEI----MLDKKFGASG---NHVVVEEFL 231


>gi|46578904|ref|YP_009712.1| phosphoribosylamine--glycine ligase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603496|ref|YP_967896.1| phosphoribosylamine--glycine ligase [Desulfovibrio vulgaris DP4]
 gi|46448316|gb|AAS94971.1| phosphoribosylamine--glycine ligase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563725|gb|ABM29469.1| phosphoribosylamine--glycine ligase [Desulfovibrio vulgaris DP4]
 gi|311232762|gb|ADP85616.1| phosphoribosylamine/glycine ligase [Desulfovibrio vulgaris RCH1]
          Length = 424

 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 22/115 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R   VP A   V      A + +     P  VVK+   A G+             
Sbjct: 106 AKNVMRDAGVPTADFAVFDEPADARAYVLEKGAP-LVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            GV V S+ +  ++ + EI+G           G   + V VE+        +L  
Sbjct: 152 -GVVVASTTEEAVAALDEIMGRK-------AYGRAGDHVVVEECLIGEEASFLCF 198


>gi|332971694|gb|EGK10642.1| carbamoyl-phosphate synthase, large subunit [Desmospora sp. 8437]
          Length = 1070

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K ++     PV +G  +S+   A    +++  P+ +  +    G  G     E    
Sbjct: 129 QAFKEMMEGIGEPVPEGKTVSTTEEALQFAESIGYPVIIRPAYTLGGFGGGTARDEAELA 188

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG 97
                 + +S    I     ILG   I  +  
Sbjct: 189 QVARRGLAASPIGQILVEESILGWKEIEYEMM 220


>gi|322689606|ref|YP_004209340.1| carbamoyl phosphate synthase large subunit [Bifidobacterium longum
           subsp. infantis 157F]
 gi|320460942|dbj|BAJ71562.1| carbamoyl phosphate synthase large subunit [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 1127

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +    K +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDKQLNKYVDRALAE--AKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|312142511|ref|YP_003993957.1| Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           [Halanaerobium sp. 'sapolanicus']
 gi|311903162|gb|ADQ13603.1| Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           [Halanaerobium sp. 'sapolanicus']
          Length = 386

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K + R   + VA+G V+ S+  A+  I+ +  P+ VVK     G
Sbjct: 117 KEVFRNAGINVARGKVVESIEQAKDFIQEVGYPV-VVKPDKGVG 159


>gi|291532008|emb|CBK97593.1| acetyl-CoA carboxylase, biotin carboxylase [Eubacterium siraeum
           70/3]
          Length = 449

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + + +VPV  G   V+ ++  A+     +  P+ V K+    GGRG          
Sbjct: 119 AKKTMIENDVPVVPGSDGVVGTLEEAQEIAAKIGYPVMV-KASAGGGGRG---------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               V     L++ ++  ++                 VN  +VE
Sbjct: 168 -IRLVEKPEELEAAMTAAKQEAKQFFANDDIYIEKFIVNPRHVE 210


>gi|52549295|gb|AAU83144.1| acetyl-CoA synthetase [uncultured archaeon GZfos26G2]
          Length = 233

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 18/226 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AK L+  + + V K V+I  +       K +  P  V+K           +    
Sbjct: 21  LFEPEAKTLVSAWGIQVPKSVLIDELEDVALKSKEI-IPPLVLKVV--------SQDILH 71

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +  G +   +  +     ++E+      T       +R+    +E+ A    EL +  
Sbjct: 72  KREFGGVITGINDSEEASFALKEM----KRTLVEKAPKARIAGFLLEETAPTGIELIIGG 127

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           L D   G      +    +++  +V+        + + D +  V S  +  L      + 
Sbjct: 128 LRDPQFGPAVMFGTGGFAVELVADVSFRLAPLNREEVFDMMREVKSYPL--LTGFRGSKP 185

Query: 182 QARIDGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
                       L       +++  +EINPL++ ++ R   +D+++
Sbjct: 186 VDIEKLASAIMKLSDILLEIEEIKEIEINPLLVHED-RAVAVDARV 230


>gi|23336049|ref|ZP_00121278.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in
           MJ) [Bifidobacterium longum DJO10A]
 gi|23464695|ref|NP_695298.1| hypothetical protein BL0068 [Bifidobacterium longum NCC2705]
 gi|189438948|ref|YP_001954029.1| carbamoylphosphate synthase large subunit [Bifidobacterium longum
           DJO10A]
 gi|81847373|sp|Q8G815|CARB_BIFLO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|226700923|sp|B3DQ32|CARB_BIFLD RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|23325259|gb|AAN23934.1| CarB [Bifidobacterium longum NCC2705]
 gi|189427383|gb|ACD97531.1| Carbamoylphosphate synthase large subunit [Bifidobacterium longum
           DJO10A]
          Length = 1127

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +    K +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDKQLNKYVDRALAE--AKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|75908114|ref|YP_322410.1| carbamoyl phosphate synthase large subunit [Anabaena variabilis
           ATCC 29413]
 gi|75701839|gb|ABA21515.1| carbamoyl-phosphate synthase large subunit [Anabaena variabilis
           ATCC 29413]
          Length = 1097

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 36/173 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +      V V      SS+  A++  + +     +++     GG G G       
Sbjct: 129 RKLFNEAMDKIGVKVCPSGTASSLDEAKAIARRIGTYPLIIRPAFTMGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +                 Q G   S V+ + ++      +E  L ++ 
Sbjct: 182 -------IAYNQEEFEEMA-----------QVGIDASPVSQILIDQSLLGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           D  +  V  I S +   +I+ +       I    + P   +T ++   L DM 
Sbjct: 224 D-LADNVVIICSIE---NIDPMGIHTGDSI---TVAPAQTLTDKEYQRLRDMA 269


>gi|325681229|ref|ZP_08160759.1| carbamoyl-phosphate synthase, large subunit [Ruminococcus albus 8]
 gi|324107151|gb|EGC01437.1| carbamoyl-phosphate synthase, large subunit [Ruminococcus albus 8]
          Length = 1074

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 51/182 (28%), Gaps = 28/182 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +++  + + K  V  SV  A    + L  P+                 +        
Sbjct: 133 KNAMKELGIGMPKSQVAYSVDEAVKIAEELKYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  ++  +       L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGMVYNVDELKVVCARGLQASL-----------VGQVLVEECIFGWEELELEVVRDAKN 226

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          + +          +  +  D    +  E    + + +E+ G      
Sbjct: 227 NKITVCFIENIDPIGVHTGDSFCSAPMLTIPEDVQKELQ-EMSYRIIESIEVIGGCNCQF 285

Query: 188 GD 189
             
Sbjct: 286 AR 287



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +V  A +    +  P+ V  S +  GGRG
Sbjct: 673 RAMMDKLGIPMPEAGMAVNVDEALAIANKIGYPVMVRPSYVL-GGRG 718


>gi|317481637|ref|ZP_07940672.1| carbamoyl-phosphate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322691567|ref|YP_004221137.1| carbamoyl phosphate synthase large subunit [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|316916927|gb|EFV38314.1| carbamoyl-phosphate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456423|dbj|BAJ67045.1| carbamoyl phosphate synthase large subunit [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 1127

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +    K +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDKQLNKYVDRALAE--AKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|312864744|ref|ZP_07724975.1| ATP-grasp domain protein [Streptococcus downei F0415]
 gi|311099871|gb|EFQ58084.1| ATP-grasp domain protein [Streptococcus downei F0415]
          Length = 394

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + R+  + VA+G V  S   A +  K L  P+ +
Sbjct: 119 QMKEIFRQTGIKVARGEVFHSDDEARNLAKELGFPVII 156


>gi|306817709|ref|ZP_07451451.1| phosphoribosylamine-glycine ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649523|gb|EFM46806.1| phosphoribosylamine-glycine ligase [Mobiluncus mulieris ATCC 35239]
          Length = 505

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A GV  S++  A +A++    P YVVK    A G+G
Sbjct: 106 AKEVMTAAGVPTAAGVACSTLAEARAALQRFGAP-YVVKQDGLAAGKG 152


>gi|302344544|ref|YP_003809073.1| carbamoyl-phosphate synthase, large subunit [Desulfarculus baarsii
           DSM 2075]
 gi|301641157|gb|ADK86479.1| carbamoyl-phosphate synthase, large subunit [Desulfarculus baarsii
           DSM 2075]
          Length = 1084

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  + K  + V   V+  ++     A + L  PL V  +    G             + G
Sbjct: 133 REAMEKIGLRVPGSVICRNLDDVRRAAEELGFPLVVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    ++  ++   R  L ++L ++           V +E+     +E  L ++ DR  
Sbjct: 180 GV--AYNIDELLETSRYGLSASLTSE-----------VMIEESVLGWKEFELEVMRDRK- 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T  +   + D 
Sbjct: 226 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDREYQMMRDA 267


>gi|205356067|ref|ZP_03222835.1| carbamoyl phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|205346191|gb|EDZ32826.1| carbamoyl phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni CG8421]
          Length = 1095

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 49/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 137 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR +
Sbjct: 182 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRVN 230

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 231 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 274


>gi|239620781|ref|ZP_04663812.1| carbamoyl-phosphate synthase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239516357|gb|EEQ56224.1| carbamoyl-phosphate synthase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 1127

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAKEAAHRIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +    K +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDKQLNKYVDRALAE--AKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|21229972|ref|NP_635889.1| phosphoribosylamine--glycine ligase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66766848|ref|YP_241610.1| phosphoribosylamine--glycine ligase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|25091070|sp|Q8PD48|PUR2_XANCP RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|21111486|gb|AAM39813.1| phosphoribosylamine-glycine ligase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572180|gb|AAY47590.1| phosphoribosylamine-glycine ligase [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 431

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHGIPT-AYYAVHTEVDAALAYVREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++    
Sbjct: 154 -GVIVAMTLGEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|187934838|ref|YP_001885312.1| CoA-binding domain protein [Clostridium botulinum B str. Eklund
           17B]
 gi|187722991|gb|ACD24212.1| CoA-binding domain protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 471

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 44/237 (18%)

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEA 255
           +AF D         P++ +K G  + +  K +F   A           D   E++  I A
Sbjct: 229 EAFIDVCKKFNHKKPIVTIKVGGSK-IGVKAAFAHTASENEGTDDAYYDKIFEEAGAIRA 287

Query: 256 KQHN---------LSYIALDG-NIGCMVNGAGLAMATMDIIKLYG--------------- 290
                         S  +L G N+  + NG G  + + D  +  G               
Sbjct: 288 TTWQEFLDVSLALGSQPSLKGENVVMITNGGGSGLLSCDHFERCGMPLKELKEISPGLGE 347

Query: 291 ---------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVK 340
                    G+P N +D+ G A   +   AF     D +V G+L +I    +   D +V 
Sbjct: 348 RIKAYMPMFGSPLNPVDISGTASPIQYKGAFTQAMRDPNVHGVLGSICPTAVTDVDAVVD 407

Query: 341 GILSAVKEVK-INIPLVMRLEGANV-DIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            ++   +  K +N P +M  +G          + + G+           A++ V+A+
Sbjct: 408 IVIELHETYKHLNKPFIMECQGGEECHRAIMKLRDHGIPAYPT------AEQSVNAM 458


>gi|146297226|ref|YP_001180997.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410802|gb|ABP67806.1| carbamoyl-phosphate synthase large subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 1077

 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 69/220 (31%), Gaps = 44/220 (20%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  +V  A    K +  P+ V  +    G            
Sbjct: 129 RELFKKTMLEIGEPVPKSIIAHNVEEALEFAKEVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEELKYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
            R S            +D   V       I   ++ P   ++ ++         ++   L
Sbjct: 222 -RDSQDNCITVCNMENIDP--VGIHTGDSI---VVAPSQTLSDKEYQMLRSAAINIIRSL 275

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +++G   +       ++     + +  +   + L     G
Sbjct: 276 KIEGGCNVQFALNPNSMEYVVIEVNPRVSRSSALASKATG 315



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           LL+   +P  +G    ++  A    + +  P+ V  S +  G
Sbjct: 677 LLKSLGIPYPQGGSAYNLEDAIKVAEQIGYPVLVRPSYVLGG 718


>gi|294795153|ref|ZP_06760287.1| carbamoyl-phosphate synthase, large subunit [Veillonella sp.
           3_1_44]
 gi|294453945|gb|EFG22320.1| carbamoyl-phosphate synthase, large subunit [Veillonella sp.
           3_1_44]
          Length = 1066

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A+ A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQEAAKKLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|238916494|ref|YP_002930011.1| phosphoribosylamine--glycine ligase [Eubacterium eligens ATCC
           27750]
 gi|238871854|gb|ACR71564.1| phosphoribosylamine--glycine ligase [Eubacterium eligens ATCC
           27750]
          Length = 431

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 57/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +S   A+  ++T   P+ V+K+   A G+             
Sbjct: 113 SKDLMKKYNIPTAAYETFTSAEEAKKYLETAEYPI-VLKADGLALGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  ++ + E+    ++ K+ G  G   + + +E+         +S+L    
Sbjct: 159 -GVLICENKEDALAGVDEL----MLDKKFGTAG---DTIVIEEFMTGRE---VSVLSFVD 207

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 208 GDTIKIMSSAQD 219


>gi|227876762|ref|ZP_03994871.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris ATCC
           35243]
 gi|227842659|gb|EEJ52859.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris ATCC
           35243]
          Length = 505

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A GV  S++  A +A++    P YVVK    A G+G
Sbjct: 106 AKEVMTAAGVPTAAGVACSTLAEARAALQRFGAP-YVVKQDGLAAGKG 152


>gi|169335520|ref|ZP_02862713.1| hypothetical protein ANASTE_01934 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258258|gb|EDS72224.1| hypothetical protein ANASTE_01934 [Anaerofustis stercorihominis DSM
           17244]
          Length = 1074

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 43/204 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L K  V   KG  + +V   +   + +  P+ V  S +  G                G
Sbjct: 675 AMLSKLGVKQPKGKGVFTVEEGKEIAQKIGYPVLVRPSYVLGG---------------RG 719

Query: 70  VRVESSLKSVISDIREIL---GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           + +    +S+I  +   +   G   +       G  V    V DG D+    ++  +++ 
Sbjct: 720 MMICHDEESLIKYLTNAIKEDGKNPVLIDKYLFGLEVEVDAVCDGVDV----FVPGIMEH 775

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                       G        +    KI + L D            +   L ++G   I 
Sbjct: 776 LDRAGV----HSGDSATLYPTRHVSDKIKETLYDYT--------RKIALELNVKGMINIQ 823

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                  LY         ++E+NP
Sbjct: 824 FIVFKDELY---------VIEVNP 838



 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/228 (10%), Positives = 76/228 (33%), Gaps = 41/228 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+++   P+ +  +++++  A+ A   +  P+ V  +    G             + G
Sbjct: 133 RKLMQEIGQPIIESRIVNTLEDAKKAALDIGYPVVVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++   ++      L  ++ T            + +E      +E+   ++  R S
Sbjct: 180 GI--VNNEDELLKIAESGLSLSMTT-----------QILIEKSIKNWKEIEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQG 181
                       +D   V       I   ++ P   ++ ++          + + + ++G
Sbjct: 225 NGTCITICNMENIDP--VGIHTGDSI---VVAPTQTLSDKECQMLRSASLDIIEAVGIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
              +       ++  A  + +  +   + L     G     + +KI+ 
Sbjct: 280 GCNVQFALHPDSMEYAIIEINPRVSRSSALASKAVGYPIAKVSAKIAL 327


>gi|134083358|emb|CAK97351.1| unnamed protein product [Aspergillus niger]
          Length = 729

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ + +S+V  A  A +T+  P+ V  +    G               
Sbjct: 224 SKAL-NEINIPIAESIAVSTVDEALKAAETVGYPIIVRSAYALGGL-------------- 268

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D  
Sbjct: 269 -GSGFAANPEELKNLSSRSLTLS-------------PQILVEKSLRGWKEVEYEVVRDAD 314

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 315 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 367

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 368 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 416


>gi|322388518|ref|ZP_08062120.1| phosphoribosylamine-glycine ligase [Streptococcus infantis ATCC
           700779]
 gi|321140636|gb|EFX36139.1| phosphoribosylamine-glycine ligase [Streptococcus infantis ATCC
           700779]
          Length = 420

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY+VP A     S    A+  I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYDVPTAAYGTFSDFEEAKVYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +    E+L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFL 189


>gi|315223839|ref|ZP_07865687.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           ochracea F0287]
 gi|314946169|gb|EFS98170.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           ochracea F0287]
          Length = 950

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLKENNIPYPRFGVAETADEALKLADELDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + + + + ++L   
Sbjct: 735 KIVINKEELEAHVVDLLRKI 754


>gi|303240753|ref|ZP_07327266.1| carbamoyl-phosphate synthase, large subunit [Acetivibrio
           cellulolyticus CD2]
 gi|302591641|gb|EFL61376.1| carbamoyl-phosphate synthase, large subunit [Acetivibrio
           cellulolyticus CD2]
          Length = 1070

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L +  +P  +G  + ++  A  A   L  P+ V  S +  G   +  F +        
Sbjct: 675 AVLEEIGIPRPEGKTVFTLEEALEAANELKYPVLVRPSYVLGGQGMEIAFSD-------- 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 ++  +  I  +     I       G  +    + DG DI
Sbjct: 727 ----KDVQEFMEIITRVKQEHPILVDKYMMGKEIEVDAICDGEDI 767


>gi|296131673|ref|YP_003638920.1| cyanophycin synthetase [Thermincola sp. JR]
 gi|296030251|gb|ADG81019.1| cyanophycin synthetase [Thermincola potens JR]
          Length = 890

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L +  +PV  G V  +   A   +K +   + V+K     G +GKG    L   S+G
Sbjct: 219 KQILSEAGIPVPNGGVARTEKEALDIMKRINNAV-VIKP--FNGNQGKG--VALNLRSEG 273

Query: 69  GVRVESSLK 77
            V+   ++ 
Sbjct: 274 EVKKAYAVA 282


>gi|82701269|ref|YP_410835.1| phosphoribosylamine--glycine ligase [Nitrosospira multiformis ATCC
           25196]
 gi|82409334|gb|ABB73443.1| phosphoribosylamine--glycine ligase [Nitrosospira multiformis ATCC
           25196]
          Length = 435

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 26/141 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P A     SS   A   I     P+ V+K+   A G+             
Sbjct: 109 AKAFMGRHGIPTADYATFSSAAKAHRYIDKKGVPI-VIKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + + ++LG        G +G     + +E+  +      +S +V   
Sbjct: 155 -GVVVAVTLEEAHAAVDKMLG--------GKSGKAGPKIVIEEFVEGEE---ISFIVMTD 202

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
              V  +AS+Q    +++  +
Sbjct: 203 GRHVLPLASSQDHKRLKDGDE 223


>gi|19113477|ref|NP_596685.1| arginine specific carbamoyl-phosphate synthase Arg4 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|51701297|sp|O94313|CARB_SCHPO RecName: Full=Carbamoyl-phosphate synthase arginine-specific large
           chain; AltName: Full=Arginine-specific
           carbamoyl-phosphate synthetase, ammonia chain
 gi|3873545|emb|CAA22122.1| arginine specific carbamoyl-phosphate synthase Arg4 (predicted)
           [Schizosaccharomyces pombe]
          Length = 1160

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 43/224 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ V +S+V  A  A + +  P+ +         R       L +   
Sbjct: 212 AKAL-NEINIPIAESVAVSTVDEALQAAEKVSYPVII---------RSAYSLGGLGSG-- 259

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                 ++ + + S   + L  T               + VE      +E+   ++ D  
Sbjct: 260 ----FANNKEELQSMAAKSLSLT-------------PQILVEKSLKGWKEVEYEVVRDAA 302

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 303 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIIRHLGVV 355

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           G+  +       +L     + +  L   + L     G      +
Sbjct: 356 GECNVQYALSPNSLEYRVIEVNARLSRSSALASKATGYPLAYTA 399


>gi|67539658|ref|XP_663603.1| hypothetical protein AN5999.2 [Aspergillus nidulans FGSC A4]
 gi|40738558|gb|EAA57748.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259479818|tpe|CBF70389.1| TPA: carbamoyl-phosphate synthetase, arginine-specific large chain
           (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 1173

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+A+ + + +V  A  A   +  P+ V  +    G               
Sbjct: 223 AKAL-NEINIPIAESIAVGTVDEALKAADEVGYPIIVRSAYALGGL-------------- 267

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D +
Sbjct: 268 -GSGFANNPEELKNLASRSLTLS-------------PQILVEKSLRGWKEVEYEVVRDAS 313

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 314 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 366

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 367 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 415


>gi|332880006|ref|ZP_08447690.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332682002|gb|EGJ54915.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 950

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLKENNIPYPRFGVAETADEALKLADELDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + + + + ++L   
Sbjct: 735 KIVINKEELEAHVVDLLRKI 754


>gi|332654356|ref|ZP_08420100.1| phosphoribosylamine--glycine ligase [Ruminococcaceae bacterium D16]
 gi|332517442|gb|EGJ47047.1| phosphoribosylamine--glycine ligase [Ruminococcaceae bacterium D16]
          Length = 418

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 66/180 (36%), Gaps = 26/180 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P AK    + +  A + I     P+ VVK+   A G+             
Sbjct: 106 SKELMKKYHIPTAKYETFTEMDKALAYIDEQGAPI-VVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S++    + +RE+    +   + G +G   + V +E+   +  E+ +    D  
Sbjct: 152 -GVVVASTVDEAKTAVREM----MEDHKFGQSG---STVVIEECM-VGPEVTVLAFCDGE 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +     S+Q      +     P         P    T E      + + L   A +  
Sbjct: 203 HLVPML--SSQDHKRAYDGNLG-PNTGGMGAFCPSPKYTPEIAKECMEKIFLPTVAALKA 259


>gi|300855543|ref|YP_003780527.1| putative FdrA [Clostridium ljungdahlii DSM 13528]
 gi|300435658|gb|ADK15425.1| predicted FdrA [Clostridium ljungdahlii DSM 13528]
          Length = 524

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 50/143 (34%), Gaps = 16/143 (11%)

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGADQDKVAAAFKI 314
            + +   G+IG +            +I   G   +  +     D+        +   FK 
Sbjct: 187 FANVVRKGDIGIVGASGTGTQEVTVLIDKLGAGISQAIGTGGRDLKSSVGGIMMIEGFKA 246

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           +  D   K I++           + K IL  V     N P+V+   G +     + I +S
Sbjct: 247 LIEDPDTKVIVLV---SKPPAPEVAKNILDMV--ASTNKPIVVDFIGGD----RKAIEDS 297

Query: 375 GLNVITAIDLDDAAQKIVHAVKG 397
           G      + L+DAA K V   KG
Sbjct: 298 G--AYACVSLEDAAYKAVALSKG 318


>gi|225350763|ref|ZP_03741786.1| hypothetical protein BIFPSEUDO_02332 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158219|gb|EEG71461.1| hypothetical protein BIFPSEUDO_02332 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 1126

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A  A   +  P+ V  S +  G                G
Sbjct: 682 EVLKKAEMNAPRYGTALSLDEAREAAHNIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLCKYVDRAL--KEAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+  G
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVEEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R       +      +D   V       I    + P+  +T  +   L D+
Sbjct: 222 -RDKKDNVVVVCPIENVDP--VGVHTGDSI---TVAPVFTLTDREYQKLRDI 267


>gi|154283467|ref|XP_001542529.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Ajellomyces capsulatus NAm1]
 gi|150410709|gb|EDN06097.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Ajellomyces capsulatus NAm1]
          Length = 1182

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + ++P+A+ V ++SV  A  A + +  P+ V  +    G               
Sbjct: 231 AKAL-NEISIPIAESVAVNSVDEALEAAEKIGYPIIVRSAYALGGL-------------- 275

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 276 -GSGFANNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 321

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 322 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 374

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 375 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 423


>gi|124003395|ref|ZP_01688245.1| glutathione synthase [Microscilla marina ATCC 23134]
 gi|123991493|gb|EAY30924.1| glutathione synthase [Microscilla marina ATCC 23134]
          Length = 332

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 26/125 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+++ +   K  V+S   AA  A + L    ++VK                      GV+
Sbjct: 115 LQQHGIQTPKTYVVSGKQAALDAARKLGDAPFIVKP--------------NRGGKGLGVQ 160

Query: 72  VESSLKSVISDIREIL-------GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +  SL+S    + + L       G  LI +   P G  +N V       I  +LY ++ V
Sbjct: 161 LFHSLESFELALDDYLNVLASVDGIYLIQEYIKPKGGHINRV-----EFINGQLYYAVEV 215

Query: 125 DRTSG 129
           D + G
Sbjct: 216 DTSQG 220


>gi|121535468|ref|ZP_01667278.1| phosphoribosylamine--glycine ligase [Thermosinus carboxydivorans
           Nor1]
 gi|121305977|gb|EAX46909.1| phosphoribosylamine--glycine ligase [Thermosinus carboxydivorans
           Nor1]
          Length = 425

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL++KYN+P AK  V   + AA   I+    P+ VVK+   A G+             
Sbjct: 106 AKALMQKYNIPTAKFAVFEDIAAAMDCIRRWGAPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++   +  ++ I+         G  G   N V +E+  +      L+   D  
Sbjct: 152 -GVVVAQTVAEALDAVQTIMRDR----AFGAAG---NRVVIEEYMEGEEASVLAFT-DGY 202

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 203 TVVPMVAA 210


>gi|76881227|gb|ABA56282.1| cyanophycin synthetase [Nostoc ellipsosporum]
 gi|157092715|gb|ABV22527.1| cyanophycin synthetase [synthetic construct]
 gi|157092741|gb|ABV22544.1| cyanophycin synthetase [Nostoc ellipsosporum NE1]
          Length = 901

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|282850076|ref|ZP_06259458.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
           ATCC 17745]
 gi|282580265|gb|EFB85666.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
           ATCC 17745]
          Length = 1066

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A+ A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQEAAKKLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|269797629|ref|YP_003311529.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
           DSM 2008]
 gi|269094258|gb|ACZ24249.1| carbamoyl-phosphate synthase, large subunit [Veillonella parvula
           DSM 2008]
          Length = 1066

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A+ A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQEAAKKLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|167033188|ref|YP_001668419.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
 gi|166859676|gb|ABY98083.1| acyl-CoA synthetase, putative [Pseudomonas putida GB-1]
          Length = 705

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           + E+Q+K  LR + +PV  G V+S+   A +    +  P  V+K+
Sbjct: 484 LDEWQSKQALRAFGLPVPAG-VLSTPERAVADAAGVGYP-LVLKA 526


>gi|114797946|ref|YP_760003.1| methylcrotonoyl-CoA carboxylase subunit alpha [Hyphomonas neptunium
           ATCC 15444]
 gi|114738120|gb|ABI76245.1| methylcrotonoyl-CoA carboxylase alpha chain [Hyphomonas neptunium
           ATCC 15444]
          Length = 633

 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK +     VPV  G       +   + A K +  PL + K+    GGRG  +  +   
Sbjct: 119 EAKRIAEDAGVPVLPGYRGEAQDIETLKKAAKKVGYPLLI-KAVAGGGGRGIRQVSKEAE 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLI 92
                +      +S   D R +L   ++
Sbjct: 178 LEAELISAVREAESAFGDGRVMLEKLVL 205


>gi|271501805|ref|YP_003334831.1| GCN5-like N-acetyltransferase [Dickeya dadantii Ech586]
 gi|270345360|gb|ACZ78125.1| GCN5-related N-acetyltransferase [Dickeya dadantii Ech586]
          Length = 888

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 23/221 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLNTLPTWIASDSTEAVYIAEKIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              ++ +G +    + + V      +L     T        RV+ + V+  A+    L L
Sbjct: 531 PHKSEIQGVMLYLQNAQEVQLAAEAMLERVRHTNPQA----RVHGLLVQGMANRTGALEL 586

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
            + V++ +     I   +GG +     ++    +    ++  +     V +     +   
Sbjct: 587 RIAVEQDAIFGPIIMLGEGGTEWN---RETQAAVALPPLNMALARYLIVQALKSGKIRSQ 643

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
             L+         L   +     D  ++  L+I+PL+    
Sbjct: 644 NALKPLDIAAFSRLLVQVSNLILDCPEIVRLDIHPLLASGE 684


>gi|228473350|ref|ZP_04058104.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275252|gb|EEK14050.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 950

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLKENNIPYPRFGVAETADEALKLADELDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + + + + ++L   
Sbjct: 735 KIVINKEELEAHVVDLLRKI 754


>gi|166364412|ref|YP_001656685.1| acetyl-CoA carboxylase biotin carboxylase subunit [Microcystis
           aeruginosa NIES-843]
 gi|166086785|dbj|BAG01493.1| biotin carboxylase [Microcystis aeruginosa NIES-843]
          Length = 448

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 82/258 (31%), Gaps = 33/258 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   +I+S   A+     +  P+ + K+    GGR           
Sbjct: 120 AKKTMQKAGVPTIPGSGGLITSEAEAKRIADDIGYPVLI-KATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC-VYVEDGADILRELYLSLLV 124
              G+R+  S           LG+ L   Q     +  N  VY+E   +  R +   +L 
Sbjct: 168 ---GMRLVKSADE--------LGNMLKAAQGEAEAAFGNSGVYLEKFIECPRHIEFQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           D        I   +    I+   +   ++     + P L              +   G  
Sbjct: 217 DSHGN---VIHLGERDCSIQRRHQKLLEEAPSPFLTPHLRSKMGNAAVKAAKSINYVGVG 273

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            ++   D   N Y  F + +  +   +P+  M  G   + +  +      L    D    
Sbjct: 274 TVEFLVDKHGNFY--FMEMNTRIQVEHPVTEMITGIDLIREQILVAQGEKLQIKQDQVIF 331

Query: 243 RDVSEEDSREIEAKQHNL 260
           R  S E     E   HN 
Sbjct: 332 RGHSIECRINAEDPDHNF 349


>gi|75908035|ref|YP_322331.1| cyanophycin synthetase [Anabaena variabilis ATCC 29413]
 gi|8134380|sp|O86109|CPHA_ANAVT RecName: Full=Cyanophycin synthetase; AltName: Full=Cyanophycin
           synthase
 gi|3393028|emb|CAA06440.1| cyanophycin synthetase [Anabaena variabilis ATCC 29413]
 gi|75701760|gb|ABA21436.1| Cyanophycin synthetase [Anabaena variabilis ATCC 29413]
          Length = 901

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|17231371|ref|NP_487919.1| cyanophycin synthetase [Nostoc sp. PCC 7120]
 gi|20137726|sp|P58572|CPHA_ANASP RecName: Full=Cyanophycin synthetase; AltName: Full=Cyanophycin
           synthase
 gi|17133013|dbj|BAB75578.1| cyanophycin synthetase [Nostoc sp. PCC 7120]
          Length = 901

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|320182091|gb|EFW56995.1| Protein acetyltransferase [Shigella boydii ATCC 9905]
          Length = 886

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +  + +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYQRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GGM+        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGMEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|91787310|ref|YP_548262.1| cyanophycin synthetase [Polaromonas sp. JS666]
 gi|91696535|gb|ABE43364.1| Cyanophycin synthetase [Polaromonas sp. JS666]
          Length = 872

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LLR   VPV  G  +S    A +  + +  P+ V K Q   G +GKG    + +  +
Sbjct: 209 KKLLRAAGVPVPLGRPVSDAADAWTVAQQIGLPVAV-KPQ--DGNQGKGVSVNISSREQ 264


>gi|194432051|ref|ZP_03064340.1| CoA binding domain/acetyltransferase domain protein [Shigella
           dysenteriae 1012]
 gi|194419580|gb|EDX35660.1| CoA binding domain/acetyltransferase domain protein [Shigella
           dysenteriae 1012]
 gi|332089194|gb|EGI94301.1| acetyltransferase family protein [Shigella dysenteriae 155-74]
          Length = 886

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +  + +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYQRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GGM+        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGMEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|294793334|ref|ZP_06758479.1| carbamoyl-phosphate synthase, large subunit [Veillonella sp.
           6_1_27]
 gi|294455765|gb|EFG24130.1| carbamoyl-phosphate synthase, large subunit [Veillonella sp.
           6_1_27]
          Length = 1066

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A+ A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQEAAKKLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|157092738|gb|ABV22542.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 849

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|157092735|gb|ABV22540.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 855

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|291519738|emb|CBK74959.1| carbamoyl-phosphate synthase, large subunit [Butyrivibrio
           fibrisolvens 16/4]
          Length = 1066

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P A G  + +   A+     L  P+ V  S +  G                G
Sbjct: 674 EILEKTQIPRAAGGTVFTAEEAKEVANRLGYPVLVRPSYVLGG---------------QG 718

Query: 70  VRVESSLKSVISD---IREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  +   +      I +I     I       G  +    + DG +I
Sbjct: 719 MQIAFNDDEIEKFMDIINQIAQDHPILVDKYLQGKEIEVDAICDGENI 766


>gi|171680141|ref|XP_001905016.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939697|emb|CAP64923.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1169

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 73/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  + N+P+AK + ++++  A  A + +  P+ V  +    G               
Sbjct: 218 AKAL-EEINIPIAKSIAVNTLDDALEAARNIGYPIIVRAAYALGGL-------------- 262

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D  
Sbjct: 263 -GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVRDAN 308

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 309 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 361

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 362 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 410


>gi|209546573|ref|YP_002278491.1| CoA-binding domain-containing protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537817|gb|ACI57751.1| CoA-binding domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 684

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E   KA L    +PV +G+   S H A    + L  P+ V+K  +    + +     L
Sbjct: 479 LTEADGKAELAACGLPVPRGLQAFSPHEAAEQAERLGFPV-VLKG-LGIAHKTEAGAVAL 536

Query: 63  PADSKGGVRVESSLKSVIS--DIREILGSTLITKQTGPTGSRV 103
                  V   ++  +  +   + +++   +     G     V
Sbjct: 537 NLGDSQAVSNAAAKMAANAGYLVEKMIDPPVSELIIGAVRDPV 579


>gi|159030646|emb|CAO88316.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 448

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 82/258 (31%), Gaps = 33/258 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   +I+S   A+     +  P+ + K+    GGR           
Sbjct: 120 AKKTMQKAGVPTIPGSGGLITSEAEAKRIADDIGYPVLI-KATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC-VYVEDGADILRELYLSLLV 124
              G+R+  S           LG+ L   Q     +  N  VY+E   +  R +   +L 
Sbjct: 168 ---GMRLVKSADE--------LGNMLKAAQGEAEAAFGNSGVYLEKFIECPRHIEFQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           D        I   +    I+   +   ++     + P L              +   G  
Sbjct: 217 DSHGN---VIHLGERDCSIQRRHQKLLEEAPSPFLTPHLRSKMGNAAVKAAKSINYVGVG 273

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            ++   D   N Y  F + +  +   +P+  M  G   + +  +      L    D    
Sbjct: 274 TVEFLVDKHGNFY--FMEMNTRIQVEHPVTEMITGIDLIREQILVAQGEKLQIKQDQVIF 331

Query: 243 RDVSEEDSREIEAKQHNL 260
           R  S E     E   HN 
Sbjct: 332 RGHSIECRINAEDPDHNF 349


>gi|157092732|gb|ABV22538.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 856

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|157092729|gb|ABV22536.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 856

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|157092726|gb|ABV22534.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 862

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|157092717|gb|ABV22528.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 870

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|74001123|ref|XP_856651.1| PREDICTED: similar to Trifunctional purine biosynthetic protein
           adenosine-3 isoform 3 [Canis familiaris]
          Length = 743

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTARWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     ++EI    +  K  G  G     + +E+  +      L     R
Sbjct: 157 -GVIVAKSTEEACKAVQEI----MQDKAFGAAG---ETIVIEELLEGEEVSCLCFTDGR 207


>gi|307706810|ref|ZP_07643615.1| hypothetical protein SMSK321_0774 [Streptococcus mitis SK321]
 gi|307617895|gb|EFN97057.1| hypothetical protein SMSK321_0774 [Streptococcus mitis SK321]
          Length = 388

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 5/97 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  +PV  G VI +    + A+K +  P+ + K     G      FK    D   
Sbjct: 117 KKLFKKAGIPVVPGAVIHTEEDVDQAVKEIGLPM-IAKPDNGVG--AAATFKLETEDDIN 173

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ--TGPTGSRV 103
             + E    +V    + +  S + T        G  V
Sbjct: 174 HFKAEWDHSTVYFFEKFVTSSEICTFDGLVDKDGKIV 210


>gi|307701594|ref|ZP_07638611.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris FB024-16]
 gi|307613273|gb|EFN92525.1| phosphoribosylamine--glycine ligase [Mobiluncus mulieris FB024-16]
          Length = 508

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A GV  S++  A +A++    P YVVK    A G+G
Sbjct: 106 AKEVMTAAGVPTAAGVACSTLTEARAALQRFGAP-YVVKQDGLAAGKG 152


>gi|166713774|ref|ZP_02244981.1| phosphoribosylamine--glycine ligase [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 429

 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 22/121 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + V AA + ++    P+ VVK+   A G+             
Sbjct: 108 AKDFLARHGIPTAYYAVHTDVDAALAYVREKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L      +R++L         G  G+RV    +E+        ++S++    
Sbjct: 154 -GVIVATTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLHGEEASFISMVDGTH 205

Query: 128 S 128
           +
Sbjct: 206 A 206


>gi|218437612|ref|YP_002375941.1| glutathione synthase [Cyanothece sp. PCC 7424]
 gi|218170340|gb|ACK69073.1| Glutathione synthase [Cyanothece sp. PCC 7424]
          Length = 622

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L     PV +G V+ S+  A ++ + L  P+ VVK  I        +   + A+ + 
Sbjct: 206 KGFLANCGFPVPQGYVVYSLREALNSAEDLGYPV-VVKPVIG------HKGIGVTANIEN 258

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
              +E +    +       G  ++ K       R+ CV
Sbjct: 259 DKELEFAYDRAVDASPNQRGQIIVEKYIPGADFRLLCV 296


>gi|157092720|gb|ABV22530.1| truncated cyanophycin synthetase [synthetic construct]
 gi|157092723|gb|ABV22532.1| truncated cyanophycin synthetase [synthetic construct]
          Length = 866

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 224 KRILAASGVPVPRGTVINFLDDLEEAIEYVGGYPIVIKPLDGNHGRG 270


>gi|74001125|ref|XP_544864.2| PREDICTED: similar to Trifunctional purine biosynthetic protein
           adenosine-3 isoform 1 [Canis familiaris]
          Length = 745

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTARWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     ++EI    +  K  G  G     + +E+  +      L     R
Sbjct: 157 -GVIVAKSTEEACKAVQEI----MQDKAFGAAG---ETIVIEELLEGEEVSCLCFTDGR 207


>gi|50085532|ref|YP_047042.1| phosphoribosylamine--glycine ligase [Acinetobacter sp. ADP1]
 gi|49531508|emb|CAG69220.1| phosphoribosylamine--glycine ligase (GARS) (Glycinamide
           ribonucleotide synthetase) (Phosphoribosylglycinamide
           synthetase) [Acinetobacter sp. ADP1]
          Length = 435

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 25/136 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+K+ +P A   V + V AA++ I+    P+ V+K+   A G+             
Sbjct: 116 AKDFLKKHQIPTAFYDVFTEVDAAKAYIEQHGAPI-VIKADGLAAGK------------- 161

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S     + I ++L       + G  G   + V +E+        ++ ++    
Sbjct: 162 -GVIVAMSNDEAFAAIDDMLA----GNKFGDAG---SRVVIEEFLAGEEASFICMI---D 210

Query: 128 SGMVAFIASTQGGMDI 143
              +  +A++Q    I
Sbjct: 211 GQNILPMATSQDHKRI 226


>gi|317012728|gb|ADU83336.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           Lithuania75]
          Length = 1085

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|309792063|ref|ZP_07686537.1| lysine biosynthesis enzyme LysX [Oscillochloris trichoides DG6]
 gi|308225870|gb|EFO79624.1| lysine biosynthesis enzyme LysX [Oscillochloris trichoides DG6]
          Length = 280

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 13/74 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  + ++  +  +A  A++ L  P+ V+K  + + GR   +  +              
Sbjct: 98  GVPTPRNLLAFTPESALEAMEQLGYPV-VLKPVVGSWGRMVSKIND------------RD 144

Query: 76  LKSVISDIREILGS 89
               I + R++LG+
Sbjct: 145 AAEAILEHRDVLGN 158


>gi|74001121|ref|XP_856608.1| PREDICTED: similar to Trifunctional purine biosynthetic protein
           adenosine-3 isoform 2 [Canis familiaris]
          Length = 746

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTARWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     ++EI    +  K  G  G     + +E+  +      L     R
Sbjct: 157 -GVIVAKSTEEACKAVQEI----MQDKAFGAAG---ETIVIEELLEGEEVSCLCFTDGR 207


>gi|78358497|ref|YP_389946.1| phosphoribosylamine--glycine ligase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220902|gb|ABB40251.1| phosphoribosylamine--glycine ligase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 423

 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 68/225 (30%), Gaps = 33/225 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R+  VP A   V    + A   +     P+ VVK+   A G+             
Sbjct: 106 AKHIMREAGVPTADFGVFDDFYEARDYVLRHGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  + +I    ++ K  G  G+ V    V + A    E     LVD  
Sbjct: 152 -GVVVARTTEEAIEALDDI----MVKKIYGSAGAHV----VVEAALAGEEASFLALVDGE 202

Query: 128 SGMVAFIAS-----TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-----CDML 177
           + +    A       +G                 L  D    +T   +  +         
Sbjct: 203 TIVPLPSAQDHKAVGEGDTGPNTGGMGAYSPAPVLPADRWDEMTELVIRPIVRTLAAKDT 262

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
              G             Y    +      E  PL++  +G L  +
Sbjct: 263 PFCGVLYAGLMMTADGPYVLEYNVRFGDPECQPLLMRLDGDLAAI 307


>gi|84489718|ref|YP_447950.1| acyl-CoA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373037|gb|ABC57307.1| predicted acyl-CoA synthetase [Methanosphaera stadtmanae DSM 3091]
          Length = 700

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 25/228 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  + + Y +  A  ++ ++   A  A + +  P+ V+K                  D 
Sbjct: 492 EAYQVAKAYGISAAPIILATTKEEAGQAAEEMQYPV-VLKI--------ASDKILHKTDI 542

Query: 67  KGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G V   +S +       +I+ S         P G  V  +          E+ + +L  
Sbjct: 543 GGVVVNINSKQEAEDTFEQIMASAKEAHPDVVPDGVEVQKMM-----PKGHEILIGML-- 595

Query: 126 RTSGMVAFIASTQGGMD---IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
           R +     I    GG+    I +V       I   +ID    + S  ++ L         
Sbjct: 596 RDAQFGPIIGFGMGGIYVNLINDVCFKLGSGISDEVIDDQ--IDSTKISKLLKGYRGENP 653

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  D    + K   D  ++  L+INP+ + ++G    LD KI  
Sbjct: 654 SDIEAVKDTVKRVTKLTLDFPEILELDINPVFVYEDG-CSALDIKIKI 700


>gi|296127501|ref|YP_003634753.1| carbamoyl-phosphate synthase, large subunit [Brachyspira murdochii
           DSM 12563]
 gi|296019317|gb|ADG72554.1| carbamoyl-phosphate synthase, large subunit [Brachyspira murdochii
           DSM 12563]
          Length = 1063

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++   +L+  ++P  KG    ++  A    K +  P+ V  S +  GGR         
Sbjct: 668 HEFE--EMLKALDIPQPKGKTAFTIDEAVIIAKDIGYPVLVRPSYVL-GGRAMEIVDNDV 724

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
           +     + +++++K + +    ++   +I K+ 
Sbjct: 725 SLK---IYMDTAVKEISNKAPILIDKYVIGKEI 754



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N PV   V++ SV  A +    +   L V  +    G            + K 
Sbjct: 133 KKLMNDINEPVPDSVIVHSVEEAVAFANKIGYHLVVRPAYTLGG-----TGGGFARNEKE 187

Query: 69  GVRVESS 75
            + +  S
Sbjct: 188 LIEICES 194


>gi|261403460|ref|YP_003247684.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Methanocaldococcus vulcanius M7]
 gi|261370453|gb|ACX73202.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Methanocaldococcus vulcanius M7]
          Length = 480

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 38/188 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N  V K   ++SV  A    + +  P+ V  +    G            
Sbjct: 126 RELFAEAMAEINEAVTKCKAVNSVDEAVEFAEEIGYPVIVRPAFTLGG------------ 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +I    + L  ++           +N V +++     +E  L ++ 
Sbjct: 174 -TGGGI--AHNKEELIDITSKGLKYSI-----------INQVLIDESVLGWKEFELEVMR 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQ 180
           DR    +       G  +I+ +     + I    I    D            +   L ++
Sbjct: 220 DRKDTCIIV----CGMENIDPMGIHTGESIVVSPIQTLPDEFYQKLRNAAIKIIRHLGIE 275

Query: 181 GQARIDGG 188
           G   I   
Sbjct: 276 GGCNIQFA 283


>gi|254779520|ref|YP_003057626.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           B38]
 gi|254001432|emb|CAX29427.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain) [Helicobacter pylori B38]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 38/201 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++   K  +  SV  A S    +  P+ V  S +  G                 ++
Sbjct: 681 LKELDIKQPKNGMAKSVDEAYSIANVIGFPIIVRPSYVLGGQH---------------MQ 725

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  +++ +       L S   + +  P     N + ++   +   EL + ++ D+    +
Sbjct: 726 ILENIEELRHY----LESVTHSLEISPK----NPLLIDKFLEKAVELDVDVICDKKEVYI 777

Query: 132 AFIAST--QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           A I     + G+   + A   P  +   ++D +  V+    A +   L + G   I    
Sbjct: 778 AGILQHIEEAGIHSGDSACFIPSTLSPEILDEIERVS----AKIALHLGVVGLLNIQFAV 833

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              +LY         L+E+NP
Sbjct: 834 YENSLY---------LIEVNP 845


>gi|296122915|ref|YP_003630693.1| cyanophycin synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015255|gb|ADG68494.1| cyanophycin synthetase [Planctomyces limnophilus DSM 3776]
          Length = 896

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV KG  +     A +A   +  P+ V+K +   G +G+G    L +  + 
Sbjct: 228 KNLLEAVGVPVPKGRQVVDAEDAWAAALEIGLPV-VIKPK--DGNQGRGVAVNLSSKEQ- 283

Query: 69  GVRVESSLKSVISDIREIL 87
              V S+  +   + REIL
Sbjct: 284 ---VFSAFAAAREEGREIL 299


>gi|78184000|ref|YP_376435.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. CC9902]
 gi|78168294|gb|ABB25391.1| biotin carboxylase [Synechococcus sp. CC9902]
          Length = 448

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 95/277 (34%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++S+   A      +  P+ ++K+    GGR           
Sbjct: 120 AKTTMQKVGVPTVPGSEGLLSNPQEAAQLAAEMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   + S  +   G        G  G     +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVPSPDQLESLYKAAQGE--AEAAFGNPG-----LYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +DP +     E   +    +  +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEEAPSPALDPELRRKMGEAAIAAARSINYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D     Y  F + +  +   +P+  M  G  L     +I+  +    R  +IQ L
Sbjct: 275 VEFLLDRSGGFY--FMEMNTRIQVEHPVTEMVTGVDLIAEQLRIAGGEPISIRQDEIQ-L 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
              + E     E  +HN       G I       G G
Sbjct: 332 NGHAIECRINAEDARHNFR--PAPGRITGWLPPGGPG 366


>gi|289522305|ref|ZP_06439159.1| acetyl-CoA synthetase / acetyltransferase family protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504141|gb|EFD25305.1| acetyl-CoA synthetase / acetyltransferase family protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 700

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 82/229 (35%), Gaps = 30/229 (13%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           EY +K LL  + VPV    +  S+  A  A + +  P+   V+  QI             
Sbjct: 485 EYDSKKLLEHWGVPVTNERLCFSLEEAIEASEEIGYPVALKVMSPQIL------------ 532

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              ++ GV   +        IR   G  L   +     + +  V V++      E  + +
Sbjct: 533 -HKTEAGVIALNLQNE--EQIRNAYGRILEKARKFNAEANIEGVLVQEMVGSGLECMIGV 589

Query: 123 LVDRTSGMVAFIASTQGGM------DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             D   G   F+A   GG+      D+        +     +I+ L G      A     
Sbjct: 590 KRDPIFG--PFVAVGLGGIYVEVLRDVSLRRAPIDENTAMEMIEELKGYPLLAGARGQKR 647

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDS 224
            ++   A      L   +  A  + +++ L+ NP+ ++  G+ + V D+
Sbjct: 648 KDIN--ALAKAVSLISRM--ACIESELNELDANPVFVLDEGKGVLVADA 692


>gi|307637608|gb|ADN80058.1| Carbamoyl-phosphate synthase large chain [Helicobacter pylori 908]
 gi|325996203|gb|ADZ51608.1| Carbamoyl-phosphate synthase large chain [Helicobacter pylori 2018]
 gi|325997797|gb|ADZ50005.1| hypothetical protein hp2017_0902 [Helicobacter pylori 2017]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAISEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|284042768|ref|YP_003393108.1| CoA-binding protein [Conexibacter woesei DSM 14684]
 gi|283946989|gb|ADB49733.1| CoA-binding domain protein [Conexibacter woesei DSM 14684]
          Length = 904

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 54/169 (31%), Gaps = 26/169 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  + +P+    V+ S  AA  A   L GP+  +K+            K L    +GG
Sbjct: 688 DLLACHGLPLPSQRVVRSPTAAARAASELDGPV-ALKALAP---------KMLHKSERGG 737

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V +  S  S      + +     T +    G  V        A    EL +    D   G
Sbjct: 738 VELGLSGPSATRRAAQRMRERFATDRDALDGFLVQR-----MAPTGLELLVGSTTDPLFG 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
               +A   GG  +E +     +         L  VT     ++   L 
Sbjct: 793 --PVVACGAGGRAVELLRDVAVR---------LAPVTDRGARNMLRELG 830


>gi|223984586|ref|ZP_03634713.1| hypothetical protein HOLDEFILI_02009 [Holdemania filiformis DSM
           12042]
 gi|223963433|gb|EEF67818.1| hypothetical protein HOLDEFILI_02009 [Holdemania filiformis DSM
           12042]
          Length = 467

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAV-KE 348
           G+P N +D+ G A   +   AF     D +V GIL +I    +   D +V  ++    + 
Sbjct: 354 GSPLNPVDISGTASPTQYKGAFMQAMRDPAVDGILGSICPTAVTNVDAVVDVVIEVHDRY 413

Query: 349 VKINIPLVMRLEGANV-DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
            ++  P +M  +G          + + G+        + A   +V   +
Sbjct: 414 RRLGKPFIMECQGGEECQRAIMKLRDHGIPAYPTA--EQAVNAMVALYR 460


>gi|331001300|ref|ZP_08324926.1| CoA binding domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|329569027|gb|EGG50823.1| CoA binding domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 893

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 84/268 (31%), Gaps = 46/268 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E ++K LL         G+   S+  A  A + L  P+ +         R  G   + 
Sbjct: 488 LYEEESKRLLAGIGFETTAGIYAGSLGEAIEAARALGYPVAMK-------LRMNGVLSK- 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQ-TGPTGSRVNCVYVEDGADILRELYLS 121
            +D+KG +    + + +    + +    +   Q     G  +        +D  REL + 
Sbjct: 540 -SDAKGVILGIRNERELKGSWKNMSERAVHLGQPEEGLGVFLQKTL---DSDNRRELRIG 595

Query: 122 LLVDRTSGMVAFIA----------STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           + + R  G + ++            T        + K+    I        +G       
Sbjct: 596 MKLTRHFGPIVYLGIGGLYGKIFKGTAFNFAPLSL-KEARDMISSEPFKTFLG--DFQ-- 650

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISF-- 228
                  L              L +   +      ++I+PL +   G   VLD+      
Sbjct: 651 ------GLPPCDPEPIVTALIRLSQLAVEVPAVRSIDIDPL-LCGKGHAIVLDAHCVIGS 703

Query: 229 -----DDNALYRHLDIQELRDVSEEDSR 251
                D+NA +    I   R   E++ R
Sbjct: 704 DTLTADENASHL---IFPYRPSFEKNVR 728


>gi|329112621|gb|AEB72014.1| RH01206p [Drosophila melanogaster]
          Length = 1353

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ K     + EILG
Sbjct: 160 -GVVVAANAKEACQAVDEILG 179


>gi|317011127|gb|ADU84874.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           SouthAfrica7]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|303256240|ref|ZP_07342256.1| putative acetyl-CoA synthetase / acetyltransferase (GNAT) family
           protein [Burkholderiales bacterium 1_1_47]
 gi|302860969|gb|EFL84044.1| putative acetyl-CoA synthetase / acetyltransferase (GNAT) family
           protein [Burkholderiales bacterium 1_1_47]
          Length = 893

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 84/268 (31%), Gaps = 46/268 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E ++K LL         G+   S+  A  A + L  P+ +         R  G   + 
Sbjct: 488 LYEEESKRLLAGIGFETTAGIYAGSLGEAIEAARALGYPVAMK-------LRMNGVLSK- 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQ-TGPTGSRVNCVYVEDGADILRELYLS 121
            +D+KG +    + + +    + +    +   Q     G  +        +D  REL + 
Sbjct: 540 -SDAKGVILGIRNERELKGSWKNMSERAVHLGQPEEGLGVFLQKTL---DSDNRRELRIG 595

Query: 122 LLVDRTSGMVAFIA----------STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA 171
           + + R  G + ++            T        + K+    I        +G       
Sbjct: 596 MKLTRHFGPIVYLGIGGLYGKIFKGTAFNFAPLSL-KEARDMISSEPFKTFLG--DFQ-- 650

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLRVLDSKISF-- 228
                  L              L +   +      ++I+PL +   G   VLD+      
Sbjct: 651 ------GLPPCDPEPIVTALIRLSQLAVEVPAVRSIDIDPL-LCGKGHAIVLDAHCVIGS 703

Query: 229 -----DDNALYRHLDIQELRDVSEEDSR 251
                D+NA +    I   R   E++ R
Sbjct: 704 DTLTADENASHL---IFPYRPSFEKNVR 728


>gi|237751481|ref|ZP_04581961.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229372847|gb|EEO23238.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 650

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 76/222 (34%), Gaps = 34/222 (15%)

Query: 12  LRKYNVPVAKGVVISSVH-------AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           L KY +         SV         A  A+  +  P  V KS +               
Sbjct: 15  LGKYGIKTP---ACKSVGLSEKITFDAFPAVIKIQSPKVVHKSDV--------------- 56

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +  +    +   RE + + L         +  +   +        ELY+  + 
Sbjct: 57  ---GGVILNLTSNDELEKAREQIIANLKKHNIELDSN--DGFIITQMV-FGEELYIGSVE 110

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D T G V      +GG+ +E        +      +    + +  +A L D         
Sbjct: 111 DSTFGNVILFG--KGGIYLELYKDVCYIESNAREDEIKRALATTKIAKLFDGFRGFDYKI 168

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
               +L  ++ K   + ++  L+INPL + K+G L  +D++I
Sbjct: 169 EWVINLVKSVQKMLQENEIKELDINPLKLTKDG-LVAVDARI 209


>gi|332796587|ref|YP_004458087.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Acidianus
           hospitalis W1]
 gi|332694322|gb|AEE93789.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Acidianus
           hospitalis W1]
          Length = 363

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           Y+ K  LR +  PV +  V +    A   +K       V+K Q   G  GKG
Sbjct: 102 YKEKEFLRDHGFPVPRFYVANDGEEALKIVKDEFNNEGVLK-QSRGGYDGKG 152


>gi|332710219|ref|ZP_08430170.1| cyanophycin synthetase [Lyngbya majuscula 3L]
 gi|332350998|gb|EGJ30587.1| cyanophycin synthetase [Lyngbya majuscula 3L]
          Length = 892

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 5/105 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR   VPV +G  I  +   E AI+ + G   V+K     G  G+G   ++ +  + 
Sbjct: 224 KQILRDAGVPVPRGTTIRFLDDLEGAIEDVGGYPIVIKP--LNGNHGRGITLDINSWEEA 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
               +++ +   S I E        +     G  V    V +   
Sbjct: 282 QTAHKTAKEVSRSVIVERYYKGFDHRILVVNGKVVA---VAERIP 323


>gi|317178731|dbj|BAJ56519.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           F30]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|226226918|ref|YP_002761024.1| hypothetical protein GAU_1512 [Gemmatimonas aurantiaca T-27]
 gi|226090109|dbj|BAH38554.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 408

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 24/129 (18%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           K L+++      V V    V S+     +A + +  P  ++K    AG   +  F+    
Sbjct: 115 KDLMKQALSAGGVRVPHHAVASNAAEVWAAAEQVGYP-LIIKP--IAGAGSQDTFR---- 167

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                       K V + I+++    ++  +    G       +  G DI    Y  +  
Sbjct: 168 --------CDDEKEVAAAIKQLGHIEVVDVEEFIDGEEFTYDTICAGGDIK---YFHVGY 216

Query: 125 DRTSGMVAF 133
            R       
Sbjct: 217 YRP--RPLI 223


>gi|210135109|ref|YP_002301548.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           P12]
 gi|210133077|gb|ACJ08068.1| carbamoyl-phosphate synthase large subunit [Helicobacter pylori
           P12]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 73/201 (36%), Gaps = 38/201 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++   K  +  S+  A S    +  P+ V  S +  G                 ++
Sbjct: 681 LKELDIKQPKNGMAKSIDEAYSIANVIGFPIIVRPSYVLGGQH---------------MQ 725

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  +++ +       L S   + +  P     N + ++   +   EL + ++ D+    +
Sbjct: 726 ILENIEELRHY----LESVTHSLEISPK----NPLLIDKFLEKAVELDVDVICDKKEVYI 777

Query: 132 AFIAST--QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           A I     + G+   + A   P  +   ++D +  V+    A +   L + G   I    
Sbjct: 778 AGILQHIEEAGIHSGDSACFIPSTLNPEILDEIERVS----AKIALHLGVVGLLNIQFAV 833

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              +LY         L+E+NP
Sbjct: 834 HQNSLY---------LIEVNP 845


>gi|188527743|ref|YP_001910430.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           Shi470]
 gi|188143983|gb|ACD48400.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           Shi470]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|52841901|ref|YP_095700.1| phosphoribosylamine-glycine ligase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148359210|ref|YP_001250417.1| phosphoribosylamine-glycine ligase [Legionella pneumophila str.
           Corby]
 gi|296107254|ref|YP_003618954.1| phosphoribosylamine--glycine ligase [Legionella pneumophila 2300/99
           Alcoy]
 gi|52629012|gb|AAU27753.1| phosphoribosylamine-glycine ligase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148280983|gb|ABQ55071.1| phosphoribosylamine-glycine ligase [Legionella pneumophila str.
           Corby]
 gi|295649155|gb|ADG25002.1| phosphoribosylamine--glycine ligase [Legionella pneumophila 2300/99
           Alcoy]
          Length = 439

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 25/129 (19%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+ KY +P + K  V +S+      +  L    YVVK+                   
Sbjct: 110 ARELMEKYGIPGLPKYKVFTSLEGIGEFLSELGENNYVVKA---------NGLMAGKGVK 160

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG  +  S +  ++  +EI                   + +E+   I +E       D 
Sbjct: 161 VGGEHL-LSFEEALNYCKEIFTHN-------------QSLVIEEKL-IGQEFSFMCFSDG 205

Query: 127 TSGMVAFIA 135
            S +   I 
Sbjct: 206 ISLVPMPIV 214


>gi|24582400|ref|NP_523497.2| adenosine 3, isoform A [Drosophila melanogaster]
 gi|22945825|gb|AAF52474.2| adenosine 3, isoform A [Drosophila melanogaster]
          Length = 1353

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ K     + EILG
Sbjct: 160 -GVVVAANAKEACQAVDEILG 179


>gi|20141408|sp|P56947|CPHA_SYNY8 RecName: Full=Cyanophycin synthetase; AltName: Full=Cyanophycin
           synthase
 gi|13516214|gb|AAF43647.2|AF220099_2 cyanophycin synthetase [Geminocystis herdmanii PCC 6308]
          Length = 874

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 32/95 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +  +PV +G VI        AI  + G   V+K      GRG         +++ 
Sbjct: 224 KTTLAEAGIPVPRGTVIYYADELADAIADVGGYPIVLKPLDGNHGRGITIDINSQQEAEE 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
              + S+     S I E        +     G  V
Sbjct: 284 AYDLASAASKTRSVIVERYYKGNDHRVLVINGKLV 318


>gi|302543711|ref|ZP_07296053.1| phosphoribosylamine-glycine ligase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302461329|gb|EFL24422.1| phosphoribosylamine-glycine ligase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 426

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 15/92 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   NVP A+  V ++    + A+     P YVVK    A G+             
Sbjct: 106 AKDVMAAANVPTARAYVCTTPAEVDEALDAFG-PPYVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPT 99
            GV V   L+             +     GP 
Sbjct: 152 -GVVVTGDLEEAREHALACGRVVIEEFLDGPE 182


>gi|237753407|ref|ZP_04583887.1| phosphoribosylamine-glycine ligase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375674|gb|EEO25765.1| phosphoribosylamine-glycine ligase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 420

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K   ++Y++P A  +       A + I+TL  P+ VVK+     G+              
Sbjct: 105 KEFAKRYDIPTASFIQTQDYEEACAFIETLNTPI-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +      +E+L      K  G +G     + +E+  D
Sbjct: 150 GVIIAQSYEEAKRAAKEML----SGKSFGESGK---TIVIEEFLD 187


>gi|298293865|ref|YP_003695804.1| phosphoribosylamine/glycine ligase [Starkeya novella DSM 506]
 gi|296930376|gb|ADH91185.1| phosphoribosylamine/glycine ligase [Starkeya novella DSM 506]
          Length = 425

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 21/115 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L + +++P A     +    A + ++    P+ V+K+     G+              
Sbjct: 108 KELCKAHDIPTAAFGRFTQAEEARAFVRKHGAPI-VLKADGLMAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L+  ++ + E+         +G  G     + +E+  D     +  L+
Sbjct: 153 GVIVAMTLEEALAGVDEVFAM------SGEDGGFRTEILIEEFLDGEEVSFFCLV 201


>gi|131613|sp|P00967|PUR2_DROME RecName: Full=Trifunctional purine biosynthetic protein
           adenosine-3; Includes: RecName:
           Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=Glycinamide ribonucleotide synthetase; Short=GARS;
           AltName: Full=Phosphoribosylglycinamide synthetase;
           Includes: RecName:
           Full=Phosphoribosylformylglycinamidine cyclo-ligase;
           AltName: Full=AIR synthase; Short=AIRS; AltName:
           Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
           RecName: Full=Phosphoribosylglycinamide
           formyltransferase; AltName:
           Full=5'-phosphoribosylglycinamide transformylase;
           AltName: Full=GAR transformylase; Short=GART
 gi|157482|gb|AAA28563.1| Gart polypeptide 4.7 kb transcript [Drosophila melanogaster]
          Length = 1353

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ K     + EILG
Sbjct: 160 -GVVVAANAKEACQAVDEILG 179


>gi|319944359|ref|ZP_08018633.1| phosphoribosylamine-glycine ligase [Lautropia mirabilis ATCC 51599]
 gi|319742320|gb|EFV94733.1| phosphoribosylamine-glycine ligase [Lautropia mirabilis ATCC 51599]
          Length = 443

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 17/105 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A     +   AA+  I     P+ VVK+   A G+             
Sbjct: 113 AKAFMKRHGIPTAAYETFTDPAAAKDYITRQGAPI-VVKADGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  ++    + + + LG           G     V VE   
Sbjct: 159 -GVVVAQTVAEAHAAVDQFLGDDFTGGSK--DGKDTARVVVEAFL 200


>gi|317180233|dbj|BAJ58019.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           F32]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + +G    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPRGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|291557307|emb|CBL34424.1| carbamoyl-phosphate synthase large subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 1092

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 45/160 (28%), Gaps = 34/160 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++   + + +  V  ++  A    + L  P+                 +        
Sbjct: 153 KNAMKDLGIGMPRSEVAYTIDEAVKIAEELKYPVV---------------LRPAYTMGGA 197

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  ++  +       L ++L           V  V VE+      EL L ++ D  +
Sbjct: 198 GGGMVYNVDELKVVCERGLQASL-----------VGQVLVEECIFGWEELELEVVRDADN 246

Query: 129 GMVAF--------IASTQGGMDIEEVAKDYPQKIFKLLID 160
             +          I    G           P+ + K L D
Sbjct: 247 NKITVCFIENIDPIGVHTGDSFCSAPMLTIPEDVQKELQD 286


>gi|330835763|ref|YP_004410491.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera cuprina Ar-4]
 gi|329567902|gb|AEB96007.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera cuprina Ar-4]
          Length = 286

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           LLR   +PV K  +  S   A    K L  P+ V+K    + GR   R
Sbjct: 98  LLRSRGIPVPKTAIAFSREKALEVAKKLGYPV-VIKPVEGSWGRMVAR 144


>gi|308062235|gb|ADO04123.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           Cuz20]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|289192033|ref|YP_003457974.1| MGS domain protein [Methanocaldococcus sp. FS406-22]
 gi|288938483|gb|ADC69238.1| MGS domain protein [Methanocaldococcus sp. FS406-22]
          Length = 619

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 33/182 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+K N+P A+G    +   A    K +  P+ V  S +  G                 
Sbjct: 210 KLLKKLNIPQAEGGTAFTKEEALEIAKRIGYPVLVRPSYVLGG---------------RA 254

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S   +I  + E +    ++++        + V ++   +   EL +  + D  S 
Sbjct: 255 MQIVYSEDELIEYMEEAVR---VSEE--------HPVLIDKFLEDAVELDVDAVCDGESV 303

Query: 130 MVAFIASTQGGMDIEEVAKDY---PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           ++  I        +          PQ + K +ID +I  T    A L   L + G   + 
Sbjct: 304 LIGAIMEHIEEAGVHSGDSATVIPPQTLPKEIIDTVIDYT----AKLARALNIVGLLNVQ 359

Query: 187 GG 188
             
Sbjct: 360 YA 361


>gi|28379200|ref|NP_786092.1| carbamoyl phosphate synthase large subunit [Lactobacillus plantarum
           WCFS1]
 gi|29337221|sp|P77886|CARB_LACPL RecName: Full=Carbamoyl-phosphate synthase pyrimidine-specific
           large chain; AltName: Full=Carbamoyl-phosphate
           synthetase ammonia chain
 gi|28272038|emb|CAD64943.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
           [Lactobacillus plantarum WCFS1]
          Length = 1058

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 55/186 (29%), Gaps = 34/186 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q KAL+ +   PV    +  +V  A +  K    P+ V  +                  +
Sbjct: 131 QFKALMEELGEPVPASGIARTVDEALAFAKQAGYPVIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    + + +       L  +            V  V +E      +E+   ++  R
Sbjct: 178 GGGI--AETPQQLHDITENGLALS-----------PVTQVLIEQSIAGYKEIEFEVM--R 222

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQ 182
            +   A +       D   V       I    +    D  + +  +    +   L+++G 
Sbjct: 223 DAADNAMVVCNMENFDP--VGIHTGDSIVYAPVQTLADREVQLLRDAALKIIRALKIEGG 280

Query: 183 ARIDGG 188
             +   
Sbjct: 281 CNVQLA 286


>gi|311725|emb|CAA24923.1| GART [Drosophila melanogaster]
          Length = 1089

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 54  AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 100

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ K     + EILG
Sbjct: 101 -GVVVAANAKEACQAVDEILG 120


>gi|318042211|ref|ZP_07974167.1| phosphoribosylamine--glycine ligase [Synechococcus sp. CB0101]
          Length = 433

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 15/87 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  VP A     +S   A +A++T   P  VVK+   A G+             
Sbjct: 118 AKALMVEAGVPTAGYWKANSREEALAALETQGQP-LVVKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITK 94
            GV V  +++   S I EI      ++
Sbjct: 164 -GVTVAETIEEARSAIEEIFAGRFGSE 189


>gi|239942528|ref|ZP_04694465.1| phosphoribosylamine--glycine ligase [Streptomyces roseosporus
          NRRL 15998]
          Length = 325

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8  AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
          AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 15 AKDVMAGAGVPTARSYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGKG 61


>gi|227824854|ref|ZP_03989686.1| phosphoribosylamine-glycine ligase [Acidaminococcus sp. D21]
 gi|226905353|gb|EEH91271.1| phosphoribosylamine-glycine ligase [Acidaminococcus sp. D21]
          Length = 424

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KY+VP A   V  S+  A++ ++    P+ V+K+   A G+             
Sbjct: 106 SKELMEKYHVPTAFFKVCDSLDEAKAYVREKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + K  +  + E++G      + G  G   + V +E+  +   E  L    D  
Sbjct: 152 -GVVVAMTEKEALEALEEMMGQE---HRFGSAG---SRVVIEEFME-GEECSLLCFTDGK 203

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 204 TIVPMIPA 211


>gi|269925439|ref|YP_003322062.1| lysine biosynthesis enzyme LysX [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789099|gb|ACZ41240.1| lysine biosynthesis enzyme LysX [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 288

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 13/76 (17%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           ++ VP  + ++  +  +A  AI+ L  P+ V+K    + GR   +  +            
Sbjct: 97  EHGVPTLRTMLAYTPESAIEAIERLGYPV-VLKPNTGSWGRLLAKIND------------ 143

Query: 74  SSLKSVISDIREILGS 89
                 + + +EILGS
Sbjct: 144 RDAAEAVLEHKEILGS 159


>gi|300175668|emb|CBK20979.2| Acetyl CoA synthetase subunit ? [Blastocystis hominis]
          Length = 737

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 64/231 (27%), Gaps = 21/231 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAES-AIKTL--PGPLYVVKSQIHAGGRGKGRF 59
           + E +   +     +      V +    A     K L      +V K             
Sbjct: 520 LTEVEGYDVFTLCGIKTPAYKVFTRGTEAADFVAKQLESGSKKFVAKVV---------SP 570

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             +     GGV +       +    E L +    +     G     + V +      E+ 
Sbjct: 571 DIIHKTDVGGVALNLKDPETVQQTVEALHAKFSKQDVEYHG-----IMVSEMVPKGLEMM 625

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-E 178
           +    +R +       S  GG+ +E +           + D    +       L +    
Sbjct: 626 IG--ANRDATFGPITVSGLGGVLVEVLKDVVFNMCPVSVEDAQFSLRHLKNTKLVNGFRG 683

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                +        +L +       +S ++INPLI   +G +  +DS    
Sbjct: 684 QPALNKPLFAQYISSLSRIMEQCPQVSEIDINPLIQSHDGSMVAVDSVFRL 734


>gi|291295928|ref|YP_003507326.1| acetyl-CoA carboxylase biotin carboxylase [Meiothermus ruber DSM
           1279]
 gi|290470887|gb|ADD28306.1| acetyl-CoA carboxylase, biotin carboxylase [Meiothermus ruber DSM
           1279]
          Length = 447

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 40/130 (30%), Gaps = 21/130 (16%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            + +  K NVP V    V+ SV  A  A + +  P+  +K+    GGRG+   +      
Sbjct: 119 GREIAAKSNVPTVPGTGVLRSVEEALEAAEQIGYPVL-LKASAGGGGRGQKVVRSSEEMK 177

Query: 67  KG-------GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV------------NCVY 107
                         S    ++    E+     +       G  V            N   
Sbjct: 178 TAFAQAQVEAQNYFSDPSLILEKYIELFRHVEVQVLGDGKGHVVHIGERDCSIQRRNQKL 237

Query: 108 VEDGADILRE 117
           +E+    L E
Sbjct: 238 IEEAPSRLEE 247


>gi|228476869|ref|ZP_04061514.1| carbamoylphosphate synthase large subunit [Streptococcus salivarius
           SK126]
 gi|228251443|gb|EEK10588.1| carbamoylphosphate synthase large subunit [Streptococcus salivarius
           SK126]
          Length = 387

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A+K +  P+ + K     G      FK    D   
Sbjct: 117 KKLFQKAGVPVVPGAVIKTDEDVDKAVKEIGLPM-IAKPDNGVG--AAATFKLETEDDIN 173

Query: 69  GVRVESSLKSVISDIR 84
             + E   ++V    +
Sbjct: 174 HFKAEWDHETVYFFEK 189


>gi|15924193|ref|NP_371727.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15926786|ref|NP_374319.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus N315]
 gi|148267694|ref|YP_001246637.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150393752|ref|YP_001316427.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156979524|ref|YP_001441783.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|253315561|ref|ZP_04838774.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|255005990|ref|ZP_05144591.2| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257795741|ref|ZP_05644720.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9781]
 gi|258415965|ref|ZP_05682235.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           A9763]
 gi|258419712|ref|ZP_05682679.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9719]
 gi|258438754|ref|ZP_05689907.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A9299]
 gi|258444540|ref|ZP_05692869.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A8115]
 gi|258447627|ref|ZP_05695771.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A6300]
 gi|258449469|ref|ZP_05697572.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A6224]
 gi|258454848|ref|ZP_05702812.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A5937]
 gi|269202817|ref|YP_003282086.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282892689|ref|ZP_06300924.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A8117]
 gi|282927543|ref|ZP_06335159.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A10102]
 gi|295407141|ref|ZP_06816942.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8819]
 gi|296275224|ref|ZP_06857731.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297245973|ref|ZP_06929832.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8796]
 gi|54036831|sp|P63740|CARB_STAAN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|54040879|sp|P63739|CARB_STAAM RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|167006449|sp|A7X1F4|CARB_STAA1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|189081833|sp|A6U122|CARB_STAA2 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|189081834|sp|A5IS88|CARB_STAA9 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|13701002|dbj|BAB42298.1| carbamoyl-phosphate synthase large chain [Staphylococcus aureus
           subsp. aureus N315]
 gi|14246973|dbj|BAB57365.1| carbamoyl-phosphate synthase large chain [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|147740763|gb|ABQ49061.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946204|gb|ABR52140.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156721659|dbj|BAF78076.1| carbamoyl-phosphate synthase large chain [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|257789713|gb|EEV28053.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9781]
 gi|257839301|gb|EEV63775.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           A9763]
 gi|257844297|gb|EEV68679.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A9719]
 gi|257848013|gb|EEV72006.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A9299]
 gi|257850033|gb|EEV73986.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A8115]
 gi|257853818|gb|EEV76777.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A6300]
 gi|257857457|gb|EEV80355.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A6224]
 gi|257863231|gb|EEV85995.1| carbamoyl-phosphate synthase large subunit [Staphylococcus aureus
           A5937]
 gi|262075107|gb|ACY11080.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282590546|gb|EFB95623.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A10102]
 gi|282764686|gb|EFC04811.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           A8117]
 gi|285816885|gb|ADC37372.1| Carbamoyl-phosphate synthase large chain [Staphylococcus aureus
           04-02981]
 gi|294967994|gb|EFG44022.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8819]
 gi|297177137|gb|EFH36391.1| carbamoyl-phosphate synthase [Staphylococcus aureus A8796]
 gi|312829596|emb|CBX34438.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           (Carbamoyl-phosphate synthetase ammonia chain)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130994|gb|EFT86978.1| carbamoyl phosphate synthase large subunit [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|329727466|gb|EGG63922.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 1057

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLRK NVP  +G   +S   A +    +  P+ V  S +  G
Sbjct: 669 EFEA--LLRKINVPQPQGKSATSPEEALANAAEIGYPVVVRPSYVLGG 714


>gi|317177706|dbj|BAJ55495.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           F16]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + +G    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPRGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|317055757|ref|YP_004104224.1| carbamoyl-phosphate synthase large subunit [Ruminococcus albus 7]
 gi|315448026|gb|ADU21590.1| carbamoyl-phosphate synthase, large subunit [Ruminococcus albus 7]
          Length = 1074

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 45/160 (28%), Gaps = 34/160 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + K  V  SV  A    + L  P+                 +        
Sbjct: 133 KNAMNELGIGMPKSQVAYSVDEAVKIAEELKYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  ++  +       L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGMVYNVDELKVVCARGLQASL-----------VGQVLVEECIFGWEELELEVVRDANN 226

Query: 129 GMVAF--------IASTQGGMDIEEVAKDYPQKIFKLLID 160
             +          I    G           P+ + K L D
Sbjct: 227 NKITVCFIENIDPIGVHTGDSFCSAPMLTIPEDVQKELQD 266



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +V  A      +  P+ V  S +  GGRG
Sbjct: 673 RAMMDKLGIPMPEAGMAVNVDEALEIANRIGYPVMVRPSYVL-GGRG 718


>gi|153951356|ref|YP_001398673.1| carbamoyl phosphate synthase large subunit [Campylobacter jejuni
           subsp. doylei 269.97]
 gi|152938802|gb|ABS43543.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 1089

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 47/171 (27%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T             
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQAMRNASFA 268


>gi|157126853|ref|XP_001660978.1| phosphoribosylamine-glycine ligase [Aedes aegypti]
 gi|108873132|gb|EAT37357.1| phosphoribosylamine-glycine ligase [Aedes aegypti]
          Length = 1372

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 22/143 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A+    +    A++ I++      VVK+   A G+             
Sbjct: 114 SKDFMHRHGIPTARYSSFTKADDAKAFIRSASFDALVVKASGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +     + + EILG     K+ G  G  V    VE+      E+ +   VD  
Sbjct: 161 -GVIVAENKDQACAAVDEILG----DKKFGSAGDVV---VVEEKLT-GEEVSVLAFVDSK 211

Query: 128 SGMVAFIASTQGGMDIEEVAKDY 150
           +  V   A     +  E+   + 
Sbjct: 212 TVRVMLPAQDHKRLQNEDRGPNT 234


>gi|312127506|ref|YP_003992380.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777525|gb|ADQ07011.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 422

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V ++   A   +        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTNYEDAYKFVNQTYKYPIVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +  +      L   +  K  G  G   N V +ED   +  E+ + ++ D  
Sbjct: 152 -GVIIANNQQEAVDA----LNLIMKEKVFGAAG---NKVVIEDYL-VGEEVSVFVVSDGR 202

Query: 128 SGMVAFIA 135
             +    A
Sbjct: 203 DIVPLTTA 210


>gi|307353852|ref|YP_003894903.1| acetyl-CoA carboxylase, biotin carboxylase [Methanoplanus
           petrolearius DSM 11571]
 gi|307157085|gb|ADN36465.1| acetyl-CoA carboxylase, biotin carboxylase [Methanoplanus
           petrolearius DSM 11571]
          Length = 492

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 80/236 (33%), Gaps = 31/236 (13%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K ++ K  VPV       +  +  A+   K +  P+ +VK+    GG            
Sbjct: 121 SKHMMDKAGVPVLPYTHDGVKDIDEAKRVAKDIGYPV-IVKASAGGGGI----------- 168

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+++  + + + + I +  G  +     G      + V++E      R +   +L D
Sbjct: 169 ---GMQIVENEEELENAIEK--GMRIAESAFGD-----STVFIEKYLVKPRHIEFQVLCD 218

Query: 126 RTSGMVAFIASTQGGMDIEEVAKD-YPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +    V           I+   +    +    ++ D L    SE    + +         
Sbjct: 219 KHGNRVHLY---DRECSIQRRHQKLVEEAPCPIMTDELRERMSESALKVAEASGYYNAGT 275

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI 239
           ++      N Y  F + +  L   + +  M  G  +     K++ D+   +   DI
Sbjct: 276 VEFLYSEGNYY--FMEMNTRLQVEHTVTEMITGVDIVKQQIKVAADEELRHSQEDI 329


>gi|261838293|gb|ACX98059.1| carbamoyl-phosphate synthase, large subunit [Helicobacter pylori
           51]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + +G    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPRGRYAYSELEALEAISEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|317182218|dbj|BAJ60002.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           F57]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + +G    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPRGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|297565958|ref|YP_003684930.1| phosphoribosylamine/glycine ligase [Meiothermus silvanus DSM 9946]
 gi|296850407|gb|ADH63422.1| phosphoribosylamine/glycine ligase [Meiothermus silvanus DSM 9946]
          Length = 423

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+++ +Y +P A+  V      A   ++    P+ V               K+    + 
Sbjct: 105 AKSVMERYGIPTARYRVFHDALEALEYLEKAGTPIVV---------------KDSGLAAG 149

Query: 68  GGVRVESSLKSVISDIREILG------STLITKQTGPTGSRVNCVYVEDGADIL 115
            GV V  ++      +  ILG      S  +  +    G  V  + V DG  I 
Sbjct: 150 KGVTVAHTVHQAKQAVANILGPADEARSGEVVIEEFLEGPEVTVLAVTDGTTIK 203


>gi|157414575|ref|YP_001481831.1| carbamoyl phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|157385539|gb|ABV51854.1| carbamoyl-phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni 81116]
          Length = 1089

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIMV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|37521581|ref|NP_924958.1| acetyl-CoA carboxylase biotin carboxylase subunit [Gloeobacter
           violaceus PCC 7421]
 gi|35212579|dbj|BAC89953.1| biotin carboxylase [Gloeobacter violaceus PCC 7421]
          Length = 449

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 87/258 (33%), Gaps = 33/258 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   +I S   A  A K +  P+ ++K+    GGRG      +  +
Sbjct: 121 ARDTMKAAGVPTVPGSEGLIDSEQEAYEAAKAIGYPV-MIKATAGGGGRGM----RIAGN 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +  +++  +      +     G+                VY+E   +  R +   +L D
Sbjct: 176 ERDLIKMVQT---AQREAEAAFGN--------------RGVYIEKYLEEPRHIEFQILAD 218

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           +       +   +    I+   +   ++     + P +     E        +   G   
Sbjct: 219 QHGN---VVHLGERDCSIQRRHQKLLEESPSPFLTPAMRERMGEAALQAARSINYVGAGT 275

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           I+   D   + Y  F + +  +   +P+  M+ G  L     +I+  +   Y   DI  +
Sbjct: 276 IEFLVDKKGDFY--FMEMNTRIQVEHPVTEMRTGIDLIAEQIRIAAGEPLGYTQSDI-RM 332

Query: 243 RDVSEEDSREIEAKQHNL 260
              + E     E   ++ 
Sbjct: 333 EGHAIECRINCEDPNNDF 350


>gi|33600743|ref|NP_888303.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50]
 gi|33568343|emb|CAE32255.1| putative pimeloyl-CoA synthetase [Bordetella bronchiseptica RB50]
          Length = 706

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 64/222 (28%), Gaps = 32/222 (14%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  A   +     +  SA+ +LPGP  V         + +     L    +   R    
Sbjct: 508 GIRTAPWRLCLDADSMGSALGSLPGPWAVKACSAQIPHKSEYGLVHLGIADEQRARALFP 567

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           +       +E+LG           G   + V V       RE  +    D   G +  + 
Sbjct: 568 V-----LRQEVLGM----------GKSFDGVIVASMVKPRREFMIGARWDSQFGCIVIVG 612

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
                 D  +  +  P     +   P     +E       +  L    R +       L 
Sbjct: 613 ------DGGKYVEAMPDVATLVY--PFDQAHAEQCLRKLRVAALFDGVRGENPLPVQELA 664

Query: 196 KAFCDKDMSL---------LEINPLIIMKNGRLRVLDSKISF 228
            A       L         ++INPLI   +GRL   D+ +  
Sbjct: 665 HAATRLGAWLHAQQGAVASVDINPLIAGPDGRLYAADALVEI 706


>gi|88608190|ref|YP_506788.1| phosphoribosylamine--glycine ligase [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600359|gb|ABD45827.1| phosphoribosylamine--glycine ligase [Neorickettsia sennetsu str.
           Miyayama]
          Length = 421

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +     +PVA+    SS++  +  I+ +     V+K+   A G+             
Sbjct: 107 AKEIAEMNGIPVARYSFCSSINNLKKQIENIGSFPLVIKADGLASGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++   +     +L         G  G     + +E+        Y  +LVD  
Sbjct: 154 -GVIVCETMGEALEAGEAMLNGLF-----GEAG---RNIIIEEFLYGQELSYF-VLVDGQ 203

Query: 128 SGMVA 132
           + +  
Sbjct: 204 TILPI 208


>gi|315586864|gb|ADU41245.1| carbamoyl-phosphate synthase, large subunit [Helicobacter pylori
           35A]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + +G    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPRGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|229817328|ref|ZP_04447610.1| hypothetical protein BIFANG_02590 [Bifidobacterium angulatum DSM
           20098]
 gi|229785117|gb|EEP21231.1| hypothetical protein BIFANG_02590 [Bifidobacterium angulatum DSM
           20098]
          Length = 1127

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 65/201 (32%), Gaps = 27/201 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A+ A  ++  P+ V  S +  GGRG        A  +  
Sbjct: 682 EVLKKAKMNAPRYGTALSLEEAQEAAHSIGYPVLVRPSYVL-GGRGM-EIVYDNAQLEKY 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V          + +   L S L+  +       ++     D      ELY+  +++    
Sbjct: 740 VERALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDV----DALFDGEELYIGGIMEH--- 792

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                        IEE           L   P   ++ + +  L +       A+     
Sbjct: 793 -------------IEEAGVHSGDAACTL---PPNTLSVDQIRRLRE--GTYAIAKGCNVQ 834

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  AF    + ++E NP
Sbjct: 835 GLINVQYAFMANTLYVIEANP 855



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVEKAGAESARSQIAHSLAEVDKIAEEFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +    + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHDEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|208434822|ref|YP_002266488.1| carbamoyl-phosphate synthase [Helicobacter pylori G27]
 gi|208432751|gb|ACI27622.1| carbamoyl-phosphate synthase [Helicobacter pylori G27]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|294655734|ref|XP_002770173.1| DEHA2C05412p [Debaryomyces hansenii CBS767]
 gi|199430563|emb|CAR65539.1| DEHA2C05412p [Debaryomyces hansenii]
          Length = 1154

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++P+A+ + + +V  A +A +T+  P+ V         R       L +       
Sbjct: 197 LKEIDIPIAESIAVETVDDALAAAETVGYPIIV---------RSAYSLGGLGSG------ 241

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 242 FAANEQELRNLASQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 288

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 289 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIIRHLGVVGECN 341

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L Y+   + +  L   + L     G      +
Sbjct: 342 VQYSLQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 381


>gi|91774335|ref|YP_567027.1| pyruvate carboxylase subunit A [Methanococcoides burtonii DSM 6242]
 gi|91713350|gb|ABE53277.1| pyruvate carboxylase subunit A [Methanococcoides burtonii DSM 6242]
          Length = 498

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 45/209 (21%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ +  VPV  G    I  V  A     ++  P+ +  S   AGG G G       D
Sbjct: 119 ARKLMIEAGVPVVPGYDKAIEDVDEALEMADSIGYPVMIKAS---AGGGGIGMKVVYSKD 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                  +SSL+S+ S  +   G                 V++E   +  R +   +L D
Sbjct: 176 E-----FQSSLESIQSVAQSAFGDP--------------TVFIEKYVEEPRHIEFQILAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-----TSEDVASLCDMLELQ 180
             S       S     D E   +   QK+ +    P++         E        +  +
Sbjct: 217 --SHGNTVYVS-----DRECSIQRRHQKLMEEAPSPVLSPELRKKMGEAAVKAVKSIGYE 269

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEIN 209
               ++           +   D   LE+N
Sbjct: 270 NAGTVEF---------LYSKGDFYFLEVN 289


>gi|33596791|ref|NP_884434.1| putative acetyl-CoA synthetase [Bordetella parapertussis 12822]
 gi|33573492|emb|CAE37478.1| Putative acetyl-CoA synthetase [Bordetella parapertussis]
          Length = 241

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 88/229 (38%), Gaps = 28/229 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            K +L  + + V K  V+    A+ + ++      YV+K               +     
Sbjct: 31  GKRILAGHGIAVPKS-VVLPADASFAQVEGQLAQPYVLK---------LVSPDVIHKTEM 80

Query: 68  GGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           GGVR+  +S  ++     E+       ++    G+RV    VE+ A+   E+ +  L D 
Sbjct: 81  GGVRLNLASPAALRQAADEM------RQRVEQAGARVEGWLVEEMAEPGVEVLVGGLRDP 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLELQGQAR 184
             G +  I    GG+ +E + KD   +I  +  +  + +  E  +S  L      Q  + 
Sbjct: 135 EFGPMVMIG--LGGIFVE-IFKDVAFRICPVTREDALDMIGELRSSPLLAGARGKQAVSI 191

Query: 185 IDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +    +            +++ L+INPLI+   G +  +D++   
Sbjct: 192 DALVETILRVGGEGGVLLAGQPEVAELDINPLIVSPRGAV-AVDARFIL 239


>gi|305667330|ref|YP_003863617.1| carbamoyl-phosphate synthase large subunit [Maribacter sp.
           HTCC2170]
 gi|88709378|gb|EAR01611.1| carbamoyl-phosphate synthase, large subunit [Maribacter sp.
           HTCC2170]
          Length = 950

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL + N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLEENNIPFPQFGVAETADEALELADKLDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + +   + ++L   
Sbjct: 735 KIVINKEELEQHVVDLLRKI 754


>gi|330466969|ref|YP_004404712.1| carbamoyl-phosphate synthase, large subunit [Verrucosispora maris
           AB-18-032]
 gi|328809940|gb|AEB44112.1| carbamoyl-phosphate synthase, large subunit [Verrucosispora maris
           AB-18-032]
          Length = 1122

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 42/176 (23%)

Query: 9   KALLRKYNVP---------VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           K ++ K  V          V +  V  S+      +  L  P+ +         R     
Sbjct: 133 KEIVAKAGVRLEVADPEGLVPRSRVCHSMDEVRETVADLGLPVVI---------RPSFTM 183

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +       +  + + +       L ++            V+ V +E+     +E  
Sbjct: 184 GGLGSG------MAHNDEDLERIAGAGLAAS-----------PVHEVLIEESVLGWKEYE 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           L L+ DR   +V           IE +          + + P + +T  +   L D
Sbjct: 227 LELMRDRHDNVVVV-------CSIENIDPMGVHTGDSVTVAPAMTLTDREFQQLRD 275



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           LL +  +   +    +S   A+     +  P+ V  S +  GGRG
Sbjct: 705 LLARAGLRAPEHGTATSYEEAKEIADEIGYPVLVRPSYVL-GGRG 748


>gi|150389045|ref|YP_001319094.1| cyanophycin synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149948907|gb|ABR47435.1| cyanophycin synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 887

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +LR   +PV  G V+++   A    + +  P+ VVK     G +GKG   EL    
Sbjct: 221 ILRSVGIPVPFGKVVTAREHAVEVAEEIGYPV-VVKPD--NGNQGKGVSLELRCSE 273


>gi|145225325|ref|YP_001136003.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145217811|gb|ABP47215.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Mycobacterium
           gilvum PYR-GCK]
          Length = 420

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 75/217 (34%), Gaps = 45/217 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   PV +   +SSV  A +  + + GP  V+K+ +  G  G+            GV 
Sbjct: 136 LSELGAPVPRFSAVSSVEDAVAFSEQVGGP-AVIKT-VRGGYDGR------------GVV 181

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + S    V S +   L            G  V    +E+   + RE  L+ LV R     
Sbjct: 182 IASDTDEVRSAVEGYL----------ADGVPV---MIEERVAMRRE--LAALVAR----- 221

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V       I   ++ P   ++ E   S    L L   + +    +
Sbjct: 222 ----SPFGQGAAWPVVETVQRDGICVTVLAPAPDISDELG-SAASELALHIASSLGVVGV 276

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSK 225
                + F   D  LL +N L +    +G   +  ++
Sbjct: 277 LA--VELFETVDGGLL-VNELAMRPHNSGHWTMDGAR 310


>gi|308181401|ref|YP_003925529.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), large subunit
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|308046892|gb|ADN99435.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), large subunit
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 1058

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 34/186 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q KAL+ +   PV    +  +V  A +  +    P+ V  +                  +
Sbjct: 131 QFKALMEELGEPVPASGIARTVDEALAFAEQAGYPVIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    + + +       L  +            V  V +E      +E+   ++  R
Sbjct: 178 GGGI--AETPQQLHDITENGLALS-----------PVTQVLIEQSIAGYKEIEFEVM--R 222

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQ 182
            +   A +       D   V       I    +    D  + +  +    +   L+++G 
Sbjct: 223 DAADNAMVVCNMENFDP--VGIHTGDSIVYAPVQTLADREVQLLRDAALKIIRALKIEGG 280

Query: 183 ARIDGG 188
             +   
Sbjct: 281 CNVQLA 286


>gi|302536048|ref|ZP_07288390.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing
           protein [Streptomyces sp. C]
 gi|302444943|gb|EFL16759.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing
           protein [Streptomyces sp. C]
          Length = 662

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 15/123 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+ AK LLR Y + V +  +++S  AA  A   +  P+      + A G       EL
Sbjct: 539 LSEHAAKQLLRAYGIRVPREQLVTSAAAAVRAAGLVGYPVV-----MKASGPQLAHKTEL 593

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G     +S   +    RE+      T         ++ + V    +   E+ + +
Sbjct: 594 GLVKVG----LTSASQIRDAYREL------TDTARYENVPLDGILVCQMIERGVEMVVGV 643

Query: 123 LVD 125
             D
Sbjct: 644 TQD 646


>gi|257438811|ref|ZP_05614566.1| phosphoribosylamine--glycine ligase [Faecalibacterium prausnitzii
           A2-165]
 gi|257198720|gb|EEU97004.1| phosphoribosylamine--glycine ligase [Faecalibacterium prausnitzii
           A2-165]
          Length = 433

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A              IK       V+K+   A G+             
Sbjct: 108 SKDLMKKYGIPTADYATFDDPAKVMDYIKAKGKYPVVIKADGLALGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +     ++EI    ++ K+ G +G   N V VE+  
Sbjct: 155 -GVLICENEEQAADGVKEI----MLDKKFGASG---NHVVVEEFL 191


>gi|253689699|ref|YP_003018889.1| GCN5-related N-acetyltransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756277|gb|ACT14353.1| GCN5-related N-acetyltransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 882

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 76/219 (34%), Gaps = 20/219 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLNTLPTWIAGDSAEAVHIAEQIGYPVAI---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    + + V      IL     T        R+  + V+  A+    +EL
Sbjct: 531 PHKSEVQGVMLYLRTAREVQQAADAILDRVKRTYPQA----RIYGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            +++  D   G +  +   +GG++  E           + +   + + +     + +   
Sbjct: 587 RIAVEQDPVFGPLIMLG--EGGVEWREKQAAVALPPLNMTLARYLVLQAVKGGKIREYSA 644

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           L+         L   +     D  ++S L+I+PL+   +
Sbjct: 645 LRPLDIPALSRLLVQVSNLILDCPEISRLDIHPLLASGD 683


>gi|271967626|ref|YP_003341822.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Streptosporangium roseum DSM 43021]
 gi|270510801|gb|ACZ89079.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Streptosporangium roseum DSM 43021]
          Length = 667

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 38/194 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPG-------------PLYVVKSQIHAGGR 54
           AKAL+ +  VPV  G   +   +A    + L G                +VK+    GGR
Sbjct: 119 AKALMAEAGVPVLPGFTAAPGSSAAELEQGLAGMSAPAGGSAPSRRTPLLVKASAGGGGR 178

Query: 55  GKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           G  R  E   D  G V      +S   +     G                 V+VE   + 
Sbjct: 179 GM-RIVEPTGDLPGAV------ESARREAESAFGDG--------------TVFVEPLLED 217

Query: 115 LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SL 173
            R + + +L DR   +       +    I+   +   ++     I P +     D A   
Sbjct: 218 ARHIEVQILADRHGTVWTL---GERECSIQRRHQKVIEETPSPAISPAMRARLCDAAVRA 274

Query: 174 CDMLELQGQARIDG 187
            + +   G   ++ 
Sbjct: 275 AEAIGYAGAGTVEF 288


>gi|62087150|dbj|BAD92022.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase isoform 1
           variant [Homo sapiens]
          Length = 1046

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 146 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 192

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 193 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 230


>gi|330507850|ref|YP_004384278.1| phosphoribosylamine--glycine ligase [Methanosaeta concilii GP-6]
 gi|328928658|gb|AEB68460.1| phosphoribosylamine--glycine ligase [Methanosaeta concilii GP-6]
          Length = 475

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 25/126 (19%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIK----TLPGPLYVVKSQIHAGGRGKGRFKEL 62
           Q K LL+K  VPV      S    A+  ++      PG   VVK+   A G+G       
Sbjct: 116 QTKDLLKKLRVPVPPCQNFSDPQEAKEYVQQRCSEEPGRGLVVKADGLAAGKGS------ 169

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                    V ++ +   S I  I+   +  +  G  G R+    +ED  +  REL    
Sbjct: 170 --------IVCATPEEAASAIERIM---VSPRLFGEAGDRIE---IEDRLE-GRELMFFA 214

Query: 123 LVDRTS 128
           L D  +
Sbjct: 215 LSDGHT 220


>gi|325958521|ref|YP_004289987.1| acetyl-CoA carboxylase, biotin carboxylase [Methanobacterium sp.
           AL-21]
 gi|325329953|gb|ADZ09015.1| acetyl-CoA carboxylase, biotin carboxylase [Methanobacterium sp.
           AL-21]
          Length = 495

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 39/212 (18%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L+++  VPV  G    I +V  A    + +  P+ ++K+    GG G     E    
Sbjct: 119 SKKLMKRAGVPVVPGGSKAIDNVEEAAKMAEIVGYPV-IIKASAGGGGIGMRTVFEED-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  +++S  S      G               + V+VE   +  R +   +L D
Sbjct: 176 -----ELVRAIESTKSVAELNFGD--------------STVFVEKYIEEPRHIEFQILAD 216

Query: 126 RTSGMVAFIASTQGGMDI--EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
                +  +A  +  +    +++ ++ P  I     D L     E        +      
Sbjct: 217 EHGNTIH-VADRECSIQRRHQKLIEESPSPIMT---DELRAEMGEAAIKAAKSIGYTNAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           + + +   LE+N  I ++
Sbjct: 273 TVEF---------IYSNGEFYFLEMNTRIQVE 295


>gi|308184703|ref|YP_003928836.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           SJM180]
 gi|308060623|gb|ADO02519.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           SJM180]
          Length = 1085

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAISEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|260892280|ref|YP_003238377.1| carbamoyl-phosphate synthase, large subunit [Ammonifex degensii
           KC4]
 gi|260864421|gb|ACX51527.1| carbamoyl-phosphate synthase, large subunit [Ammonifex degensii
           KC4]
          Length = 1075

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 64/221 (28%), Gaps = 27/221 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +R    P+ +  ++S +  A S  + +  P+ V  +    G             + G
Sbjct: 133 KETMRAIGEPIPESRIVSRLEDAVSFAREIGFPVVVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + ++      L  +LI             + VE      +E+   ++ D   
Sbjct: 180 GI--ARNEEELLEIAARGLKHSLIG-----------QILVEQCVSGWKEIEFEVMRDGAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D    +       +   L ++G   I   
Sbjct: 227 NCITVCCMENLDPMGIHTGDSIVVAPSQTLTDKEYQMLRRAAIKIIRALGIRGGCNIQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
               +L     + +  +   + L     G     + +KI+ 
Sbjct: 287 LDPRSLRYYVIEVNPRVSRSSALASKATGYPIAKVAAKIAV 327



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L   N+P   G    S   A +  + +  P+ V  S +  G                 
Sbjct: 674 RVLEAENIPRPPGGAAKSPEEALAVAERVGFPVLVRPSYVLGG---------------RA 718

Query: 70  VRVESSLKSVIS---DIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           + +  + + +         +     +       G  V    + DG D+
Sbjct: 719 MEIVYNREELEEYMRFAARVSPEYPVLVDKYIFGKEVEVDAISDGEDV 766


>gi|72382750|ref|YP_292105.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           NATL2A]
 gi|72002600|gb|AAZ58402.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           NATL2A]
          Length = 434

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL+ + N+P AK     S   A   ++    P  V+K+   A G+             
Sbjct: 118 SKALMIENNIPTAKYWSAKSKEEALEILRRFNQP-LVIKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++     I++I      + + G  G   N V +E+  +
Sbjct: 164 -GVTVCETIEESKEAIKDIF-----SGKFGSAG---NKVILEEKIE 200


>gi|254557332|ref|YP_003063749.1| carbamoyl phosphate synthase large subunit [Lactobacillus plantarum
           JDM1]
 gi|1514603|emb|CAA91005.1| carbamoyl-phosphate synthase [Lactobacillus plantarum]
 gi|254046259|gb|ACT63052.1| carbamoyl phosphate synthase large subunit [Lactobacillus plantarum
           JDM1]
          Length = 1058

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 34/186 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q KAL+ +   PV    +  +V  A +  +    P+ V  +                  +
Sbjct: 131 QFKALMEELGEPVPASGIARTVDEALAFAEQAGYPVIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    + + +       L  +            V  V +E      +E+   ++  R
Sbjct: 178 GGGI--AETPQQLHDITENGLALS-----------PVTQVLIEQSIAGYKEIEFEVM--R 222

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQ 182
            +   A +       D   V       I    +    D  + +  +    +   L+++G 
Sbjct: 223 DAADNAMVVCNMENFDP--VGIHTGDSIVYAPVQTLADREVQLLRDAALKIIRALKIEGG 280

Query: 183 ARIDGG 188
             +   
Sbjct: 281 CNVQLA 286


>gi|322516584|ref|ZP_08069498.1| carbamoylphosphate synthase large subunit [Streptococcus
           vestibularis ATCC 49124]
 gi|322124854|gb|EFX96278.1| carbamoylphosphate synthase large subunit [Streptococcus
           vestibularis ATCC 49124]
          Length = 387

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A++ +  P+ + K     G      FK    D   
Sbjct: 117 KKLFQKAGVPVVPGAVIKTNEDVDKAVQEIGLPM-IAKPDNGVG--AAATFKLETEDDIN 173

Query: 69  GVRVESSLKSVISDIR 84
             + E   ++V    +
Sbjct: 174 HFKAEWDRETVYFFEK 189


>gi|217967798|ref|YP_002353304.1| phosphoribosylamine/glycine ligase [Dictyoglomus turgidum DSM 6724]
 gi|217336897|gb|ACK42690.1| phosphoribosylamine/glycine ligase [Dictyoglomus turgidum DSM 6724]
          Length = 413

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 23/111 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++RK  +P A   +  +    +  +K    P  V+K+   A G+             
Sbjct: 106 AKEIMRKAGIPTANFRIFDNFGDIKEFLKKERYP-LVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            GV + ++++  +    ++    ++    G  G     V VE+  +  RE 
Sbjct: 152 -GVFIVNNVEEGLEIANKLFNEEIL----GEAGK---KVVVEEFLN-GREF 193


>gi|258592883|emb|CBE69192.1| carbamoyl phosphate synthase, large subunit [NC10 bacterium 'Dutch
           sediment']
          Length = 1099

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 27/130 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  V V +     S   A S ++ +  P  +  S    G                
Sbjct: 133 KQAMQKIGVEVPESGHAYSHEEARSIVERIGYPAIIRPSFTLGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +       ++  L  +            V+ V +E      +E  L ++ D   
Sbjct: 178 GGSIAYNRDEFDEQVQWGLSMS-----------PVHQVLIEASVIGWKEFELEVMRD-LK 225

Query: 129 GMVAFIASTQ 138
             V  I S +
Sbjct: 226 DNVVIICSIE 235


>gi|239814065|ref|YP_002942975.1| cyanophycin synthetase [Variovorax paradoxus S110]
 gi|239800642|gb|ACS17709.1| cyanophycin synthetase [Variovorax paradoxus S110]
          Length = 855

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  +S      +A   +  P+ VVK Q   G +GKG    +    +
Sbjct: 209 KQLLNAAGVPVPLGRPVSDAQDGWAAAMEIGLPV-VVKPQ--DGNQGKGVTVNITTQEQ 264


>gi|46581373|ref|YP_012181.1| acetyltransferase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120601450|ref|YP_965850.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris DP4]
 gi|46450795|gb|AAS97441.1| acetyltransferase, GNAT family [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561679|gb|ABM27423.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris DP4]
 gi|311235031|gb|ADP87885.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris RCH1]
          Length = 898

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 87/276 (31%), Gaps = 40/276 (14%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A+A+L  Y +PVA+ + +        A   L  P+ +                      
Sbjct: 495 EARAVLEAYGIPVAEALHVREPREVVEAAVRLGYPVAI----------KVESPDVARRSV 544

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT--GSRVNCV-YVEDGADILRELYLSLL 123
            GGV ++        D   +    +  +  G    G  V  + ++  G+++  E      
Sbjct: 545 VGGVALDVKTDEEALDAALVTAERVCAQVPGARMTGFTVQRMCHIGAGSELAVE-----T 599

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
                          G        + YP +   L     +G+  E ++       L+   
Sbjct: 600 ATDPVFGPVIRFGQGGAAS-----ETYPDRATGLP-PLNLGLAQELMSRTRAGRTLRPAE 653

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF--------DDNALY 234
                 L   + +   D  ++  LEI+PL    +G +  LD+ I          D  A+ 
Sbjct: 654 TGAVKLLLVKVSQLIIDIPEIFELEIDPLFADDDG-IVALDAHIRIAWTTRSGTDQLAIR 712

Query: 235 RHL----DIQELRDVSE--EDSREIEAKQHNLSYIA 264
            +     +   LRD  E        E +  + +++ 
Sbjct: 713 PYPRELEEHAHLRDGREVLLRPIRPEDEPDHWAFVE 748


>gi|114567289|ref|YP_754443.1| phosphoribosylamine--glycine ligase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338224|gb|ABI69072.1| phosphoribosylamine--glycine ligase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 428

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 30/134 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK LL+KY +P A   V   +  A ++ +T    G   V+K+   A G+           
Sbjct: 108 AKNLLKKYGIPTADYTVCERLDMAYASARTYTEQGKAVVIKADGLAAGK----------- 156

Query: 66  SKGGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADILRE 117
              GV V ++ +     I  ++        G  L+ ++    G  V+   + DG D    
Sbjct: 157 ---GVTVAANWEEASQAIDSMMKDKSFGQAGERLLVEECL-LGEEVSFFAICDGKD---- 208

Query: 118 LYLSLLVDRTSGMV 131
            Y+SLL  +    V
Sbjct: 209 -YISLLAAQDHKRV 221


>gi|313904390|ref|ZP_07837767.1| acetyl-CoA carboxylase, biotin carboxylase [Eubacterium
           cellulosolvens 6]
 gi|313470726|gb|EFR66051.1| acetyl-CoA carboxylase, biotin carboxylase [Eubacterium
           cellulosolvens 6]
          Length = 461

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+AL++KY VPV  G   V+     A    + +  P+ + K+    GGRG        A 
Sbjct: 119 ARALMKKYGVPVVPGSDGVLEDWKEAARIAEKVGYPVLI-KASAGGGGRGMRT-----AY 172

Query: 66  SKGGVRVESSLKSVISDIR 84
               ++         +   
Sbjct: 173 DANEIQAAFENAQAEALAA 191


>gi|300768577|ref|ZP_07078476.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), large subunit
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300493884|gb|EFK29053.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), large subunit
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 1058

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 34/186 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q KAL+ +   PV    +  +V  A +  +    P+ V  +                  +
Sbjct: 131 QFKALMEELGEPVPASGIARTVDEALAFAEQAGYPVIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    + + +       L  +            V  V +E      +E+   ++  R
Sbjct: 178 GGGI--AETPQQLHDITENGLALS-----------PVTQVLIEQSIAGYKEIEFEVM--R 222

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQ 182
            +   A +       D   V       I    +    D  + +  +    +   L+++G 
Sbjct: 223 DAADNAMVVCNMENFDP--VGIHTGDSIVYAPVQTLADREVQLLRDAALKIIRALKIEGG 280

Query: 183 ARIDGG 188
             +   
Sbjct: 281 CNVQLA 286


>gi|223038584|ref|ZP_03608877.1| carbamoyl-phosphate synthase, large subunit [Campylobacter rectus
           RM3267]
 gi|222879986|gb|EEF15074.1| carbamoyl-phosphate synthase, large subunit [Campylobacter rectus
           RM3267]
          Length = 1097

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + +      +  A +A   +  PL +  S    G                
Sbjct: 131 KKAMQKIGMDLPQSQYAYDMDEALAAAANIGFPLIIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++                  QTG   S +  + VE+     +E  + ++ DR  
Sbjct: 176 GSGVAYNIDEFKELA-----------QTGLDASPIREILVEESLLGWKEYEMEVIRDRND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++  ++ D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQAMRDA 265


>gi|126730581|ref|ZP_01746391.1| hypothetical protein SSE37_01080 [Sagittula stellata E-37]
 gi|126708747|gb|EBA07803.1| hypothetical protein SSE37_01080 [Sagittula stellata E-37]
          Length = 705

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 75/220 (34%), Gaps = 22/220 (10%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKE 61
           + E   KALL    + V  G V++S  AA  A +TL  P+ V K+Q  A   +       
Sbjct: 481 LSECTGKALLAANGLDVPAGRVVNSAQAAAEAAETLGYPV-VAKAQSGALPHKSDAGGVA 539

Query: 62  LPADSKGGVRVESS--LKSVISDIREI-LGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           L   S   V       + SV     E+ L   LI +Q+GP G+    + V    D     
Sbjct: 540 LNLGSPQSVSQAYGRIIASVYGYAPEVALEGVLIERQSGPAGA---ELIVAARRDP---- 592

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
               L      +       +   D+  +         +  I  L G      A L     
Sbjct: 593 ----LWGGVLVVGMGGIWAEVMGDMRMMPAGVDVARIEEEIRALKG-----AALLTGARG 643

Query: 179 LQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNG 217
           +          +   L     + D ++ +EINPL +   G
Sbjct: 644 MPALDIAAAAGVVSRLGHILAEDDRIAGIEINPLALYPEG 683


>gi|158338511|ref|YP_001519688.1| carbamoyl phosphate synthase large subunit [Acaryochloris marina
           MBIC11017]
 gi|158308752|gb|ABW30369.1| carbamoyl-phosphate synthase, large subunit [Acaryochloris marina
           MBIC11017]
          Length = 1080

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + V    +  ++  ++   + +     +V+     GG G G           
Sbjct: 133 KEAMERIGLGVCPSGLAETMAESQQIAQEIGTYPLIVRPAFTLGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +             Q+G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEFEAIA-----------QSGLDASPVSQILIEKSLIGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T ++   L D 
Sbjct: 227 DNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 268


>gi|114049526|emb|CAJ75872.1| PyrAb1 protein [Lactobacillus plantarum subsp. plantarum]
          Length = 1058

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 34/186 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q KAL+ +   PV    +  +V  A +  +    P+ V  +                  +
Sbjct: 131 QFKALMEELGEPVPASGIARTVDEALAFAEQAGYPVIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    + + +       L  +            V  V +E      +E+   ++  R
Sbjct: 178 GGGI--AETPQQLHDITENGLALS-----------PVTQVLIEQSIAGYKEIEFEVM--R 222

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQ 182
            +   A +       D   V       I    +    D  + +  +    +   L+++G 
Sbjct: 223 DAADNAMVVCNMENFDP--VGIHTGDSIVYAPVQTLADREVQLLRDAALKIIRALKIEGG 280

Query: 183 ARIDGG 188
             +   
Sbjct: 281 CNVQLA 286


>gi|320657076|gb|EFX24895.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
          Length = 886

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQSYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|313903382|ref|ZP_07836774.1| carbamoyl-phosphate synthase large subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466470|gb|EFR61992.1| carbamoyl-phosphate synthase large subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 1181

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 18/105 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +    G    SV  A +A + +  P+ V  S +  G                 
Sbjct: 717 QLLARLGLQRPPGAAARSVAEAMAAAERIGYPVIVRPSYVLGG---------------RA 761

Query: 70  VRVESSLKSVISD---IREILGSTLITKQTGPTGSRVNCVYVEDG 111
           ++V SS + + +       + G   +       G  +    V DG
Sbjct: 762 MQVASSPEELAAYLETAARVAGDRPVWIDRYIAGMELEVDAVADG 806


>gi|224372128|ref|YP_002606500.1| biotin carboxylase [Nautilia profundicola AmH]
 gi|223589513|gb|ACM93249.1| acetyl-CoA carboxylase, biotin carboxylase [Nautilia profundicola
           AmH]
          Length = 444

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AK +++K  VPV  G    I+SV  A+   K +  P+ ++K+
Sbjct: 118 AKEVMKKAGVPVIPGSEGAINSVEEAKKVAKEIGYPV-ILKA 158


>gi|56709170|ref|YP_165215.1| acetyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
 gi|56680855|gb|AAV97520.1| acetyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
          Length = 690

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 21/131 (16%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +  AL   + +      ++ +   A  A + + GP+ +  +Q                
Sbjct: 485 EAEGLALFADFGIESPSHALVGTREEAFLAAERIGGPVVLKTAQ----------PGLSHK 534

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV++  +    +++  + L +                + V +      E  +  + 
Sbjct: 535 SDSGGVKIGLATPQAVAEAFDDLAARFQGD-----------ILVAEMVAPGAEWSMGAIN 583

Query: 125 DRTSGMVAFIA 135
           D   G    IA
Sbjct: 584 DPDFGPAVRIA 594


>gi|15803112|ref|NP_289143.1| hypothetical protein Z3869 [Escherichia coli O157:H7 EDL933]
 gi|168752073|ref|ZP_02777095.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|168768690|ref|ZP_02793697.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|168773486|ref|ZP_02798493.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|168778564|ref|ZP_02803571.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|168790386|ref|ZP_02815393.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC869]
 gi|168801704|ref|ZP_02826711.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC508]
 gi|195936732|ref|ZP_03082114.1| hypothetical protein EscherichcoliO157_09760 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808315|ref|ZP_03250652.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208812815|ref|ZP_03254144.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208819903|ref|ZP_03260223.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209400567|ref|YP_002272059.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217327406|ref|ZP_03443489.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254794536|ref|YP_003079373.1| putative acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Escherichia coli O157:H7 str.
           TW14359]
 gi|261222980|ref|ZP_05937261.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259470|ref|ZP_05952003.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283861|ref|YP_003500679.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O55:H7 str. CB9615]
 gi|12517006|gb|AAG57701.1|AE005488_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|187770740|gb|EDU34584.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|188013994|gb|EDU52116.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|189003230|gb|EDU72216.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|189362335|gb|EDU80754.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|189370148|gb|EDU88564.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC869]
 gi|189376180|gb|EDU94596.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. EC508]
 gi|208728116|gb|EDZ77717.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208734092|gb|EDZ82779.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208740026|gb|EDZ87708.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209161967|gb|ACI39400.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217319773|gb|EEC28198.1| acetyltransferase, GNAT family protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254593936|gb|ACT73297.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Escherichia coli O157:H7 str.
           TW14359]
 gi|290763734|gb|ADD57695.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O55:H7 str. CB9615]
 gi|320188925|gb|EFW63584.1| Protein acetyltransferase [Escherichia coli O157:H7 str. EC1212]
 gi|320640833|gb|EFX10327.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. G5101]
 gi|320651474|gb|EFX19870.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H- str. H 2687]
 gi|320667561|gb|EFX34481.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H7 str. LSU-61]
 gi|326340390|gb|EGD64194.1| Protein acetyltransferase [Escherichia coli O157:H7 str. 1125]
 gi|326345073|gb|EGD68817.1| Protein acetyltransferase [Escherichia coli O157:H7 str. 1044]
          Length = 886

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQSYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|293190488|ref|ZP_06608875.1| phosphoribosylamine--glycine ligase [Actinomyces odontolyticus
           F0309]
 gi|292820899|gb|EFF79855.1| phosphoribosylamine--glycine ligase [Actinomyces odontolyticus
           F0309]
          Length = 444

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A+    +++   E+A   L  P YVVK    A G+G        A + 
Sbjct: 109 AKQVMADAGVATARAFTCTTMDEVEAAFDDLGAP-YVVKDDALAAGKG-VVVTTDRAQAS 166

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
              R   S       I + L    ++      G+ V  V ++   D  R
Sbjct: 167 EHARACLSRDGGAVVIEDYLDGPEVSLFCFADGATV--VPLQPAQDFKR 213


>gi|253990662|ref|YP_003042018.1| hypothetical protein PAU_03188 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782112|emb|CAQ85276.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 880

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 56/145 (38%), Gaps = 19/145 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      +  +   A S  + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLNTLPTWIAHNSDEAVSIAQQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V +  + I+       Q  P  +RV  + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRNADEVRASAQAIIERV---NQNFPQ-ARVQGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDI 143
            +++  D   G +  +   +GG++ 
Sbjct: 586 RIAVEQDEVFGPLIMLG--EGGVEW 608


>gi|241958018|ref|XP_002421728.1| arginine-specific carbamoyl-phosphate synthetase ammonia chain,
           putative; carbamoyl-phosphate synthase arginine-specific
           large subunit, putative; carbamyl phosphate synthetase,
           putative [Candida dubliniensis CD36]
 gi|223645073|emb|CAX39667.1| arginine-specific carbamoyl-phosphate synthetase ammonia chain,
           putative [Candida dubliniensis CD36]
          Length = 1147

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 68/220 (30%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ + + +V  A +A K +  P+ V         R       L +       
Sbjct: 190 LKEINIPIAESIAVENVDDALNAAKEVGYPIIV---------RSAYSLGGLGSG------ 234

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 235 FAANEEELRNLAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 281

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 282 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECN 334

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 335 VQYALQPDGLDFRVIEVNARLSRSSALASKATGYPLAYTA 374


>gi|159027682|emb|CAO89547.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1081

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      VPV    + +++  A++    +     +++     GG G G       
Sbjct: 129 RELFKKAMEKIGVPVCPSGIANNLEEAKAIGHQIGSYPLIIRPAFTLGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +                 Q G   S  + + VE      +E  L ++ 
Sbjct: 182 -------IAYNQEEFEPMA-----------QYGLDCSPTSQILVEKSLIGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE            + + P   +T ++   L D
Sbjct: 224 D-LADNVVIICS------IENFDAMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|15218286|ref|NP_172454.1| phosphoribosylamine--glycine ligase (PUR2) [Arabidopsis thaliana]
 gi|12644306|sp|P52420|PUR2_ARATH RecName: Full=Phosphoribosylamine--glycine ligase, chloroplastic;
           AltName: Full=Glycinamide ribonucleotide synthetase;
           Short=GARS; AltName: Full=Phosphoribosylglycinamide
           synthetase; Flags: Precursor
 gi|2160174|gb|AAB60737.1| Identical to A. thaliana PUR2 (gb|X74766). ESTs
           gb|ATTS3927,gb|N96446 come from this gene [Arabidopsis
           thaliana]
 gi|15292773|gb|AAK92755.1| putative phosphoribosylglycinamide synthetase [Arabidopsis
           thaliana]
 gi|20259251|gb|AAM14361.1| putative phosphoribosylglycinamide synthetase [Arabidopsis
           thaliana]
 gi|332190379|gb|AEE28500.1| phosphoribosylamine--glycine ligase [Arabidopsis thaliana]
          Length = 532

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    S   AA+  I+    P+ V+K+   A G+              
Sbjct: 204 KNLCHKYNIPTAKYKTFSDASAAKEYIQEQGAPI-VIKADGLAAGK-------------- 248

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V   L+     +  +L    +    G  G     V VE+  +     + +L+
Sbjct: 249 GVTVAMELEEAFEAVDSML----VKGVFGSAGC---QVVVEEFLEGEEASFFALV 296


>gi|320450480|ref|YP_004202576.1| carbamoyl-phosphate synthase, large subunit [Thermus scotoductus
           SA-01]
 gi|320150649|gb|ADW22027.1| carbamoyl-phosphate synthase, large subunit [Thermus scotoductus
           SA-01]
          Length = 1035

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 35/174 (20%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+Q    +RK  + V +G ++ SV       + +  P+ V                  P+
Sbjct: 131 EFQ--KAMRKIGLEVPRGQMVGSVEEGLHFAREVGYPVVV-----------------RPS 171

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG     +       +RE+LG  L+          V+   VE+     +E  L ++ 
Sbjct: 172 FTLGGTGGGIARNEAE--LREVLGRGLLLS-------PVHTALVEESVLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           D  +  V  I S      IE V          + + P   ++  +   + D  +
Sbjct: 223 D-HADTVVIITS------IENVDPMGVHTGDSITVAPAQTLSDAEYQRMRDAAK 269



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           HE+    L R+  +P  +G V ++   A    + +  PL    S +  G
Sbjct: 671 HEFN--RLCRELGIPQPEGRVAATPGEALELAEEVGYPLLARPSYVLGG 717


>gi|297287596|ref|XP_001093303.2| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           [Macaca mulatta]
          Length = 1067

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|242068061|ref|XP_002449307.1| hypothetical protein SORBIDRAFT_05g007470 [Sorghum bicolor]
 gi|241935150|gb|EES08295.1| hypothetical protein SORBIDRAFT_05g007470 [Sorghum bicolor]
          Length = 525

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK         A+  +K    P+ VVK+   A G+              
Sbjct: 198 KKLCDKYNIPTAKYRTFMDAVEAKQYVKHEGAPI-VVKADGLAAGK-------------- 242

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      I  +L    +    G  G   + V +E+  +     + +L+ D  +
Sbjct: 243 GVVVAMTLDEAFEAIDSML----VEGSFGSAG---SRVIIEEFLEGEEASFFALV-DGEN 294

Query: 129 GMVA 132
            +  
Sbjct: 295 ALPL 298


>gi|254171864|ref|ZP_04878540.1| acetyl-CoA synthase [Thermococcus sp. AM4]
 gi|214033760|gb|EEB74586.1| acetyl-CoA synthase [Thermococcus sp. AM4]
          Length = 473

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 71/191 (37%), Gaps = 31/191 (16%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGN-IGCMVNGAGLAMATMDIIKLY 289
           +A+++   I    D   E   ++      L +    G+ IG + +G G  +   D +  +
Sbjct: 279 DAVFKQTGIIRAEDF--EHMFDLAKAFAQLVHKLPKGDRIGIITDGGGAGVMASDAVAKF 336

Query: 290 GGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           G   A                     N  DV G  D ++   A +  T D +V  IL+ +
Sbjct: 337 GLKMAELSEETVKFLKEKFPPHAVVGNPTDVVGDTDAERYRLALEAFTKDPNVDAILVIV 396

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
              +   +      + A  + K + P+V + + G   D   R++ E G+ V         
Sbjct: 397 LFQVPLLEEEKVIDIIADYQKKSDKPIVAVAMGGKKTDRYARMLEEKGVPVYPTP----- 451

Query: 388 AQKIVHAVKGV 398
            ++ V A+ G+
Sbjct: 452 -ERGVRALAGL 461


>gi|116071382|ref|ZP_01468651.1| acetyl-CoA carboxylase [Synechococcus sp. BL107]
 gi|116066787|gb|EAU72544.1| acetyl-CoA carboxylase [Synechococcus sp. BL107]
          Length = 448

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VP   G   ++S+   A      +  P+ ++K+    GGR           
Sbjct: 120 AKTTMQSVGVPTVPGSEGLLSNPQEAAQLAAEMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   + S  +   G        G  G     +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVPSPDQLESLYKAAQGE--AEAAFGNPG-----LYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +DP +     E   +    +  +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEEAPSPALDPELRRKMGEAAIAAARSINYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D     Y  F + +  +   +P+  M  G  L     +I+  +    R  +IQ L
Sbjct: 275 VEFLLDRTGGFY--FMEMNTRIQVEHPVTEMVTGVDLIAEQLRIAGGEPISVRQDEIQ-L 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
              + E     E  +HN       G I       G G
Sbjct: 332 NGHAIECRINAEDARHNFR--PAPGRITGWLPPGGPG 366


>gi|73542271|ref|YP_296791.1| cyanophycin synthetase [Ralstonia eutropha JMP134]
 gi|72119684|gb|AAZ61947.1| Cyanophycin synthetase [Ralstonia eutropha JMP134]
          Length = 856

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K+LL    VPV  G  + S   A  A + +  P+ VVK +   G +GKG    +    +
Sbjct: 209 KSLLHAAGVPVPLGRSVRSAEQAWEAAQEIDAPV-VVKPR--DGNQGKGVAVRIRTREE 264


>gi|225679204|gb|EEH17488.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Paracoccidioides brasiliensis Pb03]
          Length = 1181

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ V ++SV  A  A   +  P+ V  +    G               
Sbjct: 230 SKAL-NEINIPIAESVAVNSVDEALEAADKIGYPIIVRSAYALGGL-------------- 274

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    S+ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 275 -GSGFASNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 320

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 321 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 373

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 374 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 422


>gi|159120126|ref|XP_001710279.1| Acyl-CoA synthetase [Giardia lamblia ATCC 50803]
 gi|157438397|gb|EDO82605.1| Acyl-CoA synthetase [Giardia lamblia ATCC 50803]
          Length = 970

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 79/267 (29%), Gaps = 49/267 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFK 60
           ++EY+A  L     + V +        +  S IKT   P   YV+K  I           
Sbjct: 103 LYEYEAYELFELIGIKVPEFRYFPLHSSLASQIKTFMKPNQKYVIKCHIPG--------- 153

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---- 116
            L     GG+ +     ++ +D+   +            G  +  V V + A        
Sbjct: 154 CLHKTDIGGIMLFKDRSNIEADLEPFVNKL------KSAGHNLEGVIVVEMAKFYDSGMS 207

Query: 117 --ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-VASL 173
             EL +S+  D +S          GG  IE       Q +  + +   + +       + 
Sbjct: 208 NGELLISVFED-SSFGPCLCFGL-GGTAIEYYGDVMKQSMSTVFLPVFLNLKESKPALAA 265

Query: 174 CDMLELQGQ----------ARIDGGDLFPNLYKAFC------------DKDMSLLEINPL 211
            + L +                   D+   L                    ++  EINP 
Sbjct: 266 IERLPVTQFLLGEVRGSKAQVRSFKDIVSPLANLAECVRYYSRFNPKSRYVVTECEINPT 325

Query: 212 IIMK-NGRLRVLDSKISFDDNALYRHL 237
           ++ K  G L  LD  +    N  +   
Sbjct: 326 VVEKGTGSLLALDGVVRVAVNPNFGKP 352


>gi|159897146|ref|YP_001543393.1| cyanophycin synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890185|gb|ABX03265.1| cyanophycin synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 894

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 16/109 (14%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    +PV +  V+ S   A  A + L  P  VVK    + GRG             G
Sbjct: 231 KLLEDAGLPVPRQRVVRSAEGAVQAARRLRYP-LVVKPLDASHGRGISI----------G 279

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGAD 113
           +  E  ++   +  +E     ++ +    +  RV       V V +   
Sbjct: 280 LTTEEEVQVAFAQAQEYRSYVIVEELVPGSDHRVLVINGEVVAVSERVP 328


>gi|168015903|ref|XP_001760489.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688186|gb|EDQ74564.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1117

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  V      +  ++       + +     +++     GG G G           
Sbjct: 152 KQAMAKIGVKTPPSGIAHTLDECFVIAERIGEFPLIIRPAFTLGGTGGG----------- 200

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L +++ +            V VE      +E  L ++ D  +
Sbjct: 201 ---IAYNKEEFEAICKAGLNASINS-----------QVLVEKSLLGWKEYELEVMRD-LA 245

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S +   +I+ +       I    + P   +T ++   L D 
Sbjct: 246 DNVVIICSIE---NIDSMGVHTGDSI---TVAPAQTLTDKEYQRLRDQ 287



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           A+L    +    G +  S   A +  K +  P+ V  S +  G
Sbjct: 711 AILNDLGIKSPSGGIAKSEDDALAIAKRVGYPVVVRPSYVLGG 753


>gi|148993890|ref|ZP_01823273.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP9-BS68]
 gi|147927597|gb|EDK78623.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP9-BS68]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  +++  +    E+L
Sbjct: 153 -GVVVAETVEQAVEAAHEML 171


>gi|320548070|ref|ZP_08042350.1| phosphoribosylamine-glycine ligase [Streptococcus equinus ATCC
           9812]
 gi|320447312|gb|EFW88075.1| phosphoribosylamine-glycine ligase [Streptococcus equinus ATCC
           9812]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+++ KY+VP A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMAKYHVPTAAYSTFSDFEQAKSYIEEHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  ++   +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVDQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|317009576|gb|ADU80156.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           India7]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|300176890|emb|CBK25459.2| Acetyl-CoA synthetase [Blastocystis hominis]
          Length = 736

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 79/235 (33%), Gaps = 23/235 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +   +L    +      ++++ + A           ++ K++  A  +   +    
Sbjct: 519 LTEIEGYDILSACGIRTPDYKLVTAGNDAAD---------FLSKAKTDAKDKFVAKIVSP 569

Query: 63  PADSK---GGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               K   GGV++  ++ +   + + E+             G   + V +        E+
Sbjct: 570 NIIHKSDVGGVKLGLTTPEEACAVVNELNAK------FSKQGIDYHGVMLYKMVPFGTEM 623

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML- 177
            +    +R +       S  GG+ +E +           + +  + + +     + +   
Sbjct: 624 MIG--ANRDATFGPITVSGLGGVLVEVLKDVVFNMCPVSVEEAQMSLDNLKTQKMLNGFR 681

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDN 231
                 R    +    + +     + +  ++INPLI + +G L  +DS  +   N
Sbjct: 682 GQPALNRAKFAEYIAIVSEIMTQCEQIKEIDINPLIQLHDGSLTAVDSVFTLKKN 736


>gi|298736126|ref|YP_003728651.1| carbamoyl-phosphate synthase large chain [Helicobacter pylori B8]
 gi|298355315|emb|CBI66187.1| carbamoyl-phosphate synthase large chain [Helicobacter pylori B8]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|291459951|ref|ZP_06599341.1| carbamoyl-phosphate synthase, large subunit [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417292|gb|EFE91011.1| carbamoyl-phosphate synthase, large subunit [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 1067

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +   +G  + ++  A+ A   L  P+ V  S +  G
Sbjct: 676 EILEKNGIRRPEGRSVRTMEEAKHAASELGYPVLVRPSYVLGG 718


>gi|295665210|ref|XP_002793156.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Paracoccidioides brasiliensis Pb01]
 gi|226278070|gb|EEH33636.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Paracoccidioides brasiliensis Pb01]
          Length = 1181

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ V ++SV  A  A   +  P+ V  +    G               
Sbjct: 230 SKAL-NEINIPIAESVAVNSVDEALEAADKIGYPIIVRSAYALGGL-------------- 274

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    S+ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 275 -GSGFASNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 320

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 321 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 373

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 374 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 422


>gi|254449289|ref|ZP_05062735.1| phosphoribosylamine--glycine ligase [gamma proteobacterium
           HTCC5015]
 gi|198261098|gb|EDY85397.1| phosphoribosylamine--glycine ligase [gamma proteobacterium
           HTCC5015]
          Length = 430

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++ +P A+    + +  A   I  +  P+ VVK+   A G+             
Sbjct: 109 SKDFLARHQIPTARYQNFTEIDPALDYIDQMGAPI-VVKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +++     +R++L         G  G RV    +E+      E    ++VD  
Sbjct: 155 -GVIIAETIEQAKDAVRDMLA----GNAFGEAGHRV---VIEEFLQ-GEEASFIVMVDGD 205

Query: 128 SGMVAFIASTQG 139
             +   +AS+Q 
Sbjct: 206 QVLP--MASSQD 215


>gi|116747460|ref|YP_844147.1| carbamoyl phosphate synthase large subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116696524|gb|ABK15712.1| carbamoyl-phosphate synthase large subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 1080

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 37/172 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R       + V    +  S+   ES  + +  P+ V  S    G            
Sbjct: 129 RELFRDAMKRIGLRVPASGIARSMSEVESIAREIGFPIIVRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    + + +    +  L ++            ++ V +E+     +E  L ++ 
Sbjct: 177 -TGGGV--AYNREELKELAQSGLDASF-----------IHTVMLEESVLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           D     V  I S      IE +          + + P   +T  +   L D 
Sbjct: 223 D-CMDNVVIICS------IENMDAMGVHTGDSITVAPAQTLTDREYQLLRDA 267



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 48/207 (23%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+K  +   +     ++  A  A   +  P+ V  S +  G   +  F          
Sbjct: 681 KLLQKLGLKQPRNATAFTLREAAEAAGRIGYPVVVRPSYVLGGRAMEIVFD--------- 731

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                           +L S + T      G     + ++   +   E    + VD  S 
Sbjct: 732 --------------AAMLESFMKTAVHVSPGHP---ILIDQFLEDAVE----IDVDAISD 770

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKL-LIDPLIGVTSE---DVASLCDMLELQGQA 183
               +    GG+   IE+           L  +     +  E       L   L + G  
Sbjct: 771 GTVTVV---GGIMEHIEQAGIHSGDSACVLPPMSISRSIQEEIRRQTRLLAKELGVVGLM 827

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINP 210
            I           A  + ++ +LE+NP
Sbjct: 828 NIQF---------ALQNGEIFILEVNP 845


>gi|261839705|gb|ACX99470.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori 52]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|251781498|ref|YP_002995799.1| phosphoribosylamine--glycine ligase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242390126|dbj|BAH80585.1| phosphoribosylamine-glycine ligase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I     P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYQVPTAAYGTFSDFEEAKAYILEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  ++   +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVDQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|226290917|gb|EEH46345.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Paracoccidioides brasiliensis Pb18]
          Length = 1181

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ V ++SV  A  A   +  P+ V  +    G               
Sbjct: 230 SKAL-NEINIPIAESVAVNSVDEALEAADKIGYPIIVRSAYALGGL-------------- 274

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    S+ + + +     L             +    + VE      +E+   ++ D  
Sbjct: 275 -GSGFASNAEELKNLSSRSL-------------TLAPQILVEKSLKGWKEVEYEVVRDAA 320

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 321 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 373

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 374 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 422


>gi|217032466|ref|ZP_03437959.1| hypothetical protein HPB128_175g27 [Helicobacter pylori B128]
 gi|216945874|gb|EEC24494.1| hypothetical protein HPB128_175g27 [Helicobacter pylori B128]
          Length = 1000

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|308183071|ref|YP_003927198.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           PeCan4]
 gi|308065256|gb|ADO07148.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           PeCan4]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|240104213|ref|YP_002960522.1| Carbamoylphosphate synthase large subunit region, short form
           [Thermococcus gammatolerans EJ3]
 gi|239911767|gb|ACS34658.1| Carbamoylphosphate synthase large subunit region, short form
           [Thermococcus gammatolerans EJ3]
          Length = 349

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 9   KALLR---KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG-KGRFKELPA 64
           K L++   K  VP  +  V+ +    ES+ + L  P +VVK  + +G RG +  +K +  
Sbjct: 119 KELMKIAKKVGVPYPEFYVVRTWDELESSAEKLGFP-FVVKPPVASGMRGFRIVYKNINR 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTL 91
                     S K  + ++  ILG   
Sbjct: 178 KEAFFKEKPDSSKVTMEELHNILGEEF 204


>gi|217034399|ref|ZP_03439813.1| hypothetical protein HP9810_884g4 [Helicobacter pylori 98-10]
 gi|216943130|gb|EEC22602.1| hypothetical protein HP9810_884g4 [Helicobacter pylori 98-10]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|238063916|ref|ZP_04608625.1| LOW QUALITY PROTEIN: carbamoyl-phosphate synthase subunit L
           [Micromonospora sp. ATCC 39149]
 gi|237885727|gb|EEP74555.1| LOW QUALITY PROTEIN: carbamoyl-phosphate synthase subunit L
           [Micromonospora sp. ATCC 39149]
          Length = 930

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 42/176 (23%)

Query: 9   KALLRKYNVP---------VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           K ++ K  V          V +  V  S+   E+ +  L  P+ +         R     
Sbjct: 200 KDIVAKAGVRLGIADPAALVPRSRVCHSMAEVEATVAELGLPVVI---------RPSFTM 250

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +       +  S   +       L ++            V+ V +E+     +E  
Sbjct: 251 GGLGSG------MAHSDADLRRIAGAGLAAS-----------PVHEVLIEESVLGWKEYE 293

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           L L+ DR   +V           IE V          + + P + +T  +  +L D
Sbjct: 294 LELMRDRHDNVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQNLRD 342



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+L +  +      + +S   A++    +  P+ V  S +  GGRG
Sbjct: 779 AVLARAGLRAPAHGMATSYEEAKAIAAEIGYPVLVRPSYVL-GGRG 823


>gi|83589733|ref|YP_429742.1| carbamoyl-phosphate synthase large subunit [Moorella thermoacetica
           ATCC 39073]
 gi|83572647|gb|ABC19199.1| carbamoyl-phosphate synthase large subunit [Moorella thermoacetica
           ATCC 39073]
          Length = 1063

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 1/94 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL +  +P  +G   +SV       K L  P+ V  S +  GGR            +  
Sbjct: 664 ALLNELGIPRPRGGTATSVGEVVKIAKELGFPVLVRPSYVL-GGRAMEIVHSEGELLEYA 722

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                        + + L  T +       G  V
Sbjct: 723 TTAVRVAPEHPVLVDKYLPGTEVEVDAVSDGETV 756



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 100/327 (30%), Gaps = 52/327 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K ++   + PV +  +++ V  A    + +  P+ V  +    G             +
Sbjct: 121 QFKEMMLAIDEPVPESRIVNRVEEALEFAREIGYPVIVRPAYTLGG-------------T 167

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV    +   + S   + L  +L           +  V VE      +E+   ++  R
Sbjct: 168 GGGV--AHNEAELRSIALKGLKLSL-----------IQQVLVERSVAGWKEIEYEVI--R 212

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQ 182
            S            +D   V       I         D    +       +   L ++G 
Sbjct: 213 DSNDNCITVCNMENIDP--VGIHTGDSIVVAPSQTLSDREYHLLRRSALKIIRALGIEGG 270

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK-----ISFDD--NALYR 235
             +       ++     + +  +   + L     G      +      ++ D+  NA+ R
Sbjct: 271 CNVQFALDPGSMRYYVIEVNPRVSRSSALASKATGYPIARVATKIALGLTLDEIPNAVTR 330

Query: 236 H--------LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCM---VNGAGLAMATMD 284
                    LD   ++       +   A++   + +   G +  +    +GA L      
Sbjct: 331 ETKACFEPALDYVVVKIPRFPFDKFSLAERILGTQMKATGEVMAIDRTFSGALLKAVRSL 390

Query: 285 IIKLYGGAPANFLDVGGGADQDKVAAA 311
            +KL G   A F      A + K+A A
Sbjct: 391 ELKLDGLKVAAFQRFSDSALRRKMAEA 417


>gi|172056497|ref|YP_001812957.1| phosphoribosylamine--glycine ligase [Exiguobacterium sibiricum
           255-15]
 gi|171989018|gb|ACB59940.1| phosphoribosylamine--glycine ligase [Exiguobacterium sibiricum
           255-15]
          Length = 418

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  +P A   V +S   A + I+    P+ VVK+   A G+             
Sbjct: 105 AKALMDRAGIPTADHAVFTSAAEATAYIRRQGAPI-VVKADGLAAGK------------- 150

Query: 68  GGVRVESSLKSVISDIREILGSTL 91
            GV V ++++  +  I EI G   
Sbjct: 151 -GVTVATTIEQAVQAIDEIFGGDF 173


>gi|308063748|gb|ADO05635.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           Sat464]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          L I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSLTIAPSLTLTDKEYQRMRDA 265


>gi|15920370|ref|NP_376039.1| hypothetical protein ST0192 [Sulfolobus tokodaii str. 7]
 gi|41017394|sp|Q976J9|LYSX_SULTO RecName: Full=Alpha-aminoadipate--lysW ligase lysX; Short=AAA--lysW
           ligase lysX
 gi|15621152|dbj|BAB65148.1| 285aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 285

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           LL K+ + V K +V  S   A      L  P+ V+K    + GR   R
Sbjct: 97  LLSKHGIRVPKTIVAFSKEKALELANKLSYPV-VIKPVEGSWGRMVAR 143


>gi|332525743|ref|ZP_08401890.1| cyanophycin synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109300|gb|EGJ10223.1| cyanophycin synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 717

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    VPV +G V +S   A    + +  P+ V
Sbjct: 225 KRLLAAVGVPVPEGRVAASAADAWDIAEDVGLPVAV 260


>gi|288940559|ref|YP_003442799.1| phosphoribosylamine/glycine ligase [Allochromatium vinosum DSM 180]
 gi|298286851|sp|Q46482|PUR2_ALLVD RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|288895931|gb|ADC61767.1| phosphoribosylamine/glycine ligase [Allochromatium vinosum DSM 180]
          Length = 428

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 34/162 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + +  A + ++ +  P+ VVK+   A G+             
Sbjct: 108 AKDFLHRHGIPTAAYGVFTELEPALAYLRQVGAPV-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +   L +  + + ++LG     +           V +E+        +++++  R 
Sbjct: 154 -GVILADDLATAEAAVHDMLGGGRFGRAGAR-------VVIEEFLTGEEASFIAMVDGRH 205

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLID 160
              +  +AS+Q          G +   +    P  I    I 
Sbjct: 206 ---ILPLASSQDHKARDDGDRGPNTGGMGAYSPAPIVTPEIH 244


>gi|254414671|ref|ZP_05028436.1| phosphoribosylamine--glycine ligase [Microcoleus chthonoplastes PCC
           7420]
 gi|196178519|gb|EDX73518.1| phosphoribosylamine--glycine ligase [Microcoleus chthonoplastes PCC
           7420]
          Length = 421

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++   VP     + +    A + +K    P+ VVK+   A G+             
Sbjct: 108 AKTLMQSAGVPTPGFAMFADKDEAIAYLKQQAAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  ++ +  +                 N V +E+     +E+ +  L D  
Sbjct: 154 -GVTVAQTIEEAVAAVEFLFKHKF------------NAVVIEECVT-GQEVSVLALTDGI 199

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 200 TIRPLLPA 207


>gi|158258557|dbj|BAF85249.1| unnamed protein product [Homo sapiens]
 gi|307684388|dbj|BAJ20234.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase [synthetic
           construct]
          Length = 1010

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|78070756|gb|AAI07713.1| Phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase [Homo sapiens]
          Length = 1010

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|73537717|ref|YP_298084.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72121054|gb|AAZ63240.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 697

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 17/133 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    +PV +  V   V AA +A + +  P+ V  S      + +     L  +    V 
Sbjct: 491 LAAAGMPVVEHYVCRHVDAAVAAWQRIGAPVAVKASSPQVPHKSEYGLVALNCNDPESV- 549

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
                    +   +       T+     G+    V V   +   RE  +    D   G V
Sbjct: 550 -------ASAFAAQ-------TRTLEKMGATCEGVVVARMSRAQRECMIGAHWDPVFGAV 595

Query: 132 AFIASTQGGMDIE 144
             +    GG  +E
Sbjct: 596 LVVG--DGGKYVE 606


>gi|32170714|dbj|BAC78379.1| putative salicyl-CoA synthetase [Streptomyces sp. WA46]
          Length = 685

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 74/229 (32%), Gaps = 30/229 (13%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+ AK +L    +      V +   AA +A+  L GP+ V               + L  
Sbjct: 474 EHTAKGVLADLGIRTPVRRVCADPTAAHAALDDLGGPVVV----------KILDAEILHK 523

Query: 65  DSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              GGV+V   + + +   +  +  S                + VE  A    EL + + 
Sbjct: 524 TEVGGVQVGIRTHEELDDALARMPASP--------------ALLVEQMAPAGPELIVGVR 569

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLELQG 181
            D   G V  +     G    E+  D   ++  L       +  E               
Sbjct: 570 RDPVFGPVLALG---AGGTAAEILGDVSLRLAPLSAHEAHAMLDELATRQMFLGARGTTP 626

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
             R     +   L     D  ++  EINPL ++ +G +  LD+ +   D
Sbjct: 627 VDRARLTHVLLALASLAADDAVAECEINPLRVLPDGDVVALDAVLLLRD 675


>gi|4503915|ref|NP_000810.1| trifunctional purine biosynthetic protein adenosine-3 isoform 1
           [Homo sapiens]
 gi|209869993|ref|NP_001129477.1| trifunctional purine biosynthetic protein adenosine-3 isoform 1
           [Homo sapiens]
 gi|209869995|ref|NP_001129478.1| trifunctional purine biosynthetic protein adenosine-3 isoform 1
           [Homo sapiens]
 gi|131616|sp|P22102|PUR2_HUMAN RecName: Full=Trifunctional purine biosynthetic protein
           adenosine-3; Includes: RecName:
           Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=Glycinamide ribonucleotide synthetase; Short=GARS;
           AltName: Full=Phosphoribosylglycinamide synthetase;
           Includes: RecName:
           Full=Phosphoribosylformylglycinamidine cyclo-ligase;
           AltName: Full=AIR synthase; Short=AIRS; AltName:
           Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
           RecName: Full=Phosphoribosylglycinamide
           formyltransferase; AltName:
           Full=5'-phosphoribosylglycinamide transformylase;
           AltName: Full=GAR transformylase; Short=GART
 gi|31642|emb|CAA38119.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Homo sapiens]
 gi|119630231|gb|EAX09826.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform CRA_b
           [Homo sapiens]
 gi|119630233|gb|EAX09828.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform CRA_b
           [Homo sapiens]
 gi|158259255|dbj|BAF85586.1| unnamed protein product [Homo sapiens]
          Length = 1010

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|307610374|emb|CBW99943.1| phosphoribosylamine-glycine ligase [Legionella pneumophila 130b]
          Length = 439

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 25/129 (19%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+ KY +P + K  V +S+      +  L    +VVK+                   
Sbjct: 110 ARELMEKYGIPGLPKYKVFTSLEGIGEFLSELGENNFVVKA---------NGLMAGKGVK 160

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG  +  S +  ++  +EI                   + +E+   I +E       D 
Sbjct: 161 VGGEHL-LSFEEALNYCKEIFTHN-------------QSLVIEEKL-IGQEFSFMCFSDG 205

Query: 127 TSGMVAFIA 135
            S +   I 
Sbjct: 206 ISLVPMPIV 214


>gi|114684353|ref|XP_514869.2| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           isoform 3 [Pan troglodytes]
 gi|332871871|ref|XP_003319102.1| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           isoform 1 [Pan troglodytes]
 gi|332871873|ref|XP_003319103.1| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           isoform 2 [Pan troglodytes]
          Length = 1010

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|108563325|ref|YP_627641.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           HPAG1]
 gi|107837098|gb|ABF84967.1| carbamoyl-phosphate synthase [Helicobacter pylori HPAG1]
          Length = 1085

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    +   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|54294562|ref|YP_126977.1| phosphoribosylamine-glycine ligase [Legionella pneumophila str.
           Lens]
 gi|53754394|emb|CAH15878.1| Phosphoribosylamine-glycine ligase [Legionella pneumophila str.
           Lens]
          Length = 439

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 25/129 (19%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+ KY +P + K  V +S+      +  L    +VVK+                   
Sbjct: 110 ARELMEKYGIPGLPKYKVFTSLEGIGEFLSELGENNFVVKA---------NGLMAGKGVK 160

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG  +  S +  ++  +EI                   + +E+   I +E       D 
Sbjct: 161 VGGEHL-LSFEEALNYCKEIFTHN-------------QSLVIEEKL-IGQEFSFMCFSDG 205

Query: 127 TSGMVAFIA 135
            S +   I 
Sbjct: 206 ISLVPMPIV 214


>gi|323126291|gb|ADX23588.1| phosphoribosylamine--glycine ligase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I     P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYQVPTAAYGTFSDFEEAKAYILEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  ++   +    E+L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVDQAVEAAHEML----LDNKFGDSGARV---VIEEFLE 190


>gi|303244496|ref|ZP_07330831.1| acetyl-CoA carboxylase, biotin carboxylase [Methanothermococcus
           okinawensis IH1]
 gi|302485194|gb|EFL48123.1| acetyl-CoA carboxylase, biotin carboxylase [Methanothermococcus
           okinawensis IH1]
          Length = 507

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 71/212 (33%), Gaps = 39/212 (18%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK +++   VPV  G    I   +      + +  P+ ++K+         G        
Sbjct: 119 AKRIMKNAGVPVLPGREDPIEDPNEVIEVAEEIGYPV-IIKA-------SAGGGGMGMGV 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +     +  +++S  S  +   G               + V++E   +  R + + +L D
Sbjct: 171 AYNKQELIETIESTKSIAQSAFGD--------------STVFIEKYLEKPRHIEIQILAD 216

Query: 126 RTSGMVAFIASTQGGMDI--EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           +  G V  +   +  +    +++ ++ P  I    +   +G   E        +      
Sbjct: 217 KY-GNVVHLGDRECSIQRRHQKLIEEAPAPIMTEELRVKMG---EAAVKAAKAINYHSAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           + + +   LE+N  + ++
Sbjct: 273 TVEF---------LYNNGEFYFLEMNTRVQVE 295


>gi|302871759|ref|YP_003840395.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574618|gb|ADL42409.1| phosphoribosylamine/glycine ligase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V ++   A   +        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYEVFTNYEDAYKFVNQTSKYPIVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTL-------ITKQTGPTGSRVNCVYVEDGADI 114
            GV +  + +  I  +  I+   +       I  +    G  V+   V DG DI
Sbjct: 152 -GVIIAKTKQDAIEALNLIMKERVFGTAGNRIVIEDYLVGEEVSVFVVSDGKDI 204


>gi|85858069|ref|YP_460271.1| carbamoyl phosphate synthase large subunit [Syntrophus
           aciditrophicus SB]
 gi|85721160|gb|ABC76103.1| carbamoyl-phosphate synthase large chain [Syntrophus aciditrophicus
           SB]
          Length = 1066

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + K     +V  AE     L  P+ V  +    G                
Sbjct: 133 KETMTRLGIDMPKSEPAYTVEEAEKIASKLGYPVVVRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +L+ + +               G + SRV  + +E+      EL L ++ D  +
Sbjct: 178 GGGLVYNLEELRAVASR-----------GISASRVGQILIEESVLGWEELELEVVRDEKN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 QMITV 231



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + ++RK  +P+ +  +  ++  A    K +  PL V  S +  GGRG
Sbjct: 671 RKMMRKLGIPMPESGMAINLQEALDVAKRIGYPLMVRPSYVL-GGRG 716


>gi|325290457|ref|YP_004266638.1| phosphoribosylamine--glycine ligase [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965858|gb|ADY56637.1| phosphoribosylamine--glycine ligase [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 426

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP A+  V +    AE+ I  +  P+ V+K+   A G+             
Sbjct: 112 AKEIMDEAAVPTAQYKVFTDQEEAEAYIGRVGAPI-VIKADGLAAGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S     +  + +I+G +      G  G     V VE+  +  +E+ L    D T
Sbjct: 158 -GVIVASLFDEAVEAVDKIMGGSF-----GEAG---TKVVVEEYLE-GQEVSLLCFCDGT 207

Query: 128 SGMVAF 133
           + +   
Sbjct: 208 TALPMV 213


>gi|320662741|gb|EFX30080.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O55:H7 str. USDA 5905]
          Length = 886

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQSYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPENQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|285017124|ref|YP_003374835.1| phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472342|emb|CBA14848.1| probable phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Xanthomonas albilineans]
          Length = 429

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P      + +   A  A     G   V+K+   A G+             
Sbjct: 108 AKDFLHRHGIPT-AFYAVHTEVDAALAYVYEKGAPIVIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + +R++L         G  G+RV    +E+  D     ++S++ D  
Sbjct: 154 -GVIVAMTLAEAEAAVRDML----SGNAFGEAGARV---VIEEFLDGEEASFISMV-DGV 204

Query: 128 SGMVA 132
           S +  
Sbjct: 205 SALPM 209


>gi|171778358|ref|ZP_02919537.1| hypothetical protein STRINF_00388 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282889|gb|EDT48313.1| hypothetical protein STRINF_00388 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+++ KY++P A     S    A+S I+    P+ VVK+   A G+             
Sbjct: 107 AKSIMAKYHIPTAAYSTFSDFEQAKSYIEEHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +++  +    E+L    +  + G +G+RV    +E+  D
Sbjct: 153 -GVVVAETVEQAVEAAHEML----LDNKFGDSGARV---VIEEFLD 190


>gi|120612620|ref|YP_972298.1| cyanophycin synthetase [Acidovorax citrulli AAC00-1]
 gi|120591084|gb|ABM34524.1| cyanophycin synthetase [Acidovorax citrulli AAC00-1]
          Length = 861

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  ++ +  A    + +  P+ VVK Q   G +GKG    +   ++
Sbjct: 209 KRLLHAAGVPVPLGRPVADLEDAWKVAEEVGLPV-VVKPQ--DGNQGKGVTVNITTRAQ 264


>gi|260437973|ref|ZP_05791789.1| carbamoyl-phosphate synthase, large subunit [Butyrivibrio crossotus
           DSM 2876]
 gi|292809599|gb|EFF68804.1| carbamoyl-phosphate synthase, large subunit [Butyrivibrio crossotus
           DSM 2876]
          Length = 1065

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 20/109 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P A G  + +   A  A   L  P+ V  S +  G                G
Sbjct: 673 EILEQTGIPRAAGKTVFTTEEALEAANELGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISDIREILGSTLITK----QTGPTGSRVNCVYVEDGADI 114
           +++  S K ++  + EI+   +            G  +    V DG DI
Sbjct: 718 MQIAISDKDIVEFM-EIINRQVQEHPILVDKYLMGKEIEVDAVCDGEDI 765


>gi|167750665|ref|ZP_02422792.1| hypothetical protein EUBSIR_01642 [Eubacterium siraeum DSM 15702]
 gi|167656344|gb|EDS00474.1| hypothetical protein EUBSIR_01642 [Eubacterium siraeum DSM 15702]
 gi|291558253|emb|CBL35370.1| acetyl-CoA carboxylase, biotin carboxylase [Eubacterium siraeum
           V10Sc8a]
          Length = 449

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + + +VPV  G   V+ ++  A+     +  P+ V K+    GGRG          
Sbjct: 119 AKKTMIENDVPVVPGSDGVVGTLEEAQEIAAKIGYPIMV-KASAGGGGRG---------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               V     L++ ++  ++                 VN  +VE
Sbjct: 168 -IRLVEKPEELEAAMTAAKQEAKQFFANDDIYIEKFIVNPRHVE 210


>gi|163845930|ref|YP_001633974.1| lysine biosynthesis enzyme LysX [Chloroflexus aurantiacus J-10-fl]
 gi|222523653|ref|YP_002568123.1| lysine biosynthesis enzyme LysX [Chloroflexus sp. Y-400-fl]
 gi|163667219|gb|ABY33585.1| lysine biosynthesis enzyme LysX [Chloroflexus aurantiacus J-10-fl]
 gi|222447532|gb|ACM51798.1| lysine biosynthesis enzyme LysX [Chloroflexus sp. Y-400-fl]
          Length = 282

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 13/74 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  + ++  +  +A  A++ L  P+ V+K  I + GR   +  +              
Sbjct: 98  GVPTPRCLLAFTPESALEAMEQLGYPV-VLKPVIGSWGRMVSKIND------------RD 144

Query: 76  LKSVISDIREILGS 89
               I + R++LG+
Sbjct: 145 AAEAILEHRDVLGN 158


>gi|119964381|ref|YP_949079.1| phosphoribosylamine--glycine ligase [Arthrobacter aurescens TC1]
 gi|119951240|gb|ABM10151.1| phosphoribosylamine--glycine ligase [Arthrobacter aurescens TC1]
          Length = 452

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 18/106 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ + NVP A   V ++   A  A+ T   P YVVK    A G+             
Sbjct: 122 AKQIMAEANVPTAMARVATNADEAADALDTFGAP-YVVKDDGLAAGK------------- 167

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDG 111
            GV V       ++  +     G T++ ++    G  V+   + DG
Sbjct: 168 -GVVVTKDRAEALAHAQACFDAGGTVVIEEFL-DGPEVSLFVLCDG 211


>gi|73669099|ref|YP_305114.1| pyruvate carboxylase subunit A [Methanosarcina barkeri str. Fusaro]
 gi|12018158|gb|AAG45427.1|AF317651_4 pyruvate carboxylase ATP-binding subunit PYCA [Methanosarcina
           barkeri]
 gi|72396261|gb|AAZ70534.1| pyruvate carboxylase subunit A [Methanosarcina barkeri str. Fusaro]
          Length = 493

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 51/220 (23%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ K  VPV  G    +     A    + +  P+ +  S   AGG G          
Sbjct: 119 ARNLMVKAGVPVVPGTKDAVEDPVEAVKIAEEIGYPVLIKAS---AGGGGI--------- 166

Query: 66  SKGGVRVESSLKS---VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              G++V +S       +S  R++ GS              + V++E   +  R + + +
Sbjct: 167 ---GMKVVNSSDEFATALSSTRQMAGSAFGD----------SSVFIEKYVEEPRHIEIQI 213

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-----TSEDVASLCDML 177
           L D     +          D E   +   QK+ +    P++         E    +   +
Sbjct: 214 LADGYGNTIYL-------SDRECSIQRRHQKLIEEAPSPIMTPELRAKMGEAAVRVAKTI 266

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  ++           +   +   LE+N  + +++G
Sbjct: 267 GYVNAGTVEF---------LYSKGNFYFLEVNTRLQVEHG 297


>gi|33596908|ref|NP_884551.1| putative pimeloyl-CoA synthetase [Bordetella parapertussis 12822]
 gi|33566359|emb|CAE37604.1| putative pimeloyl-CoA synthetase [Bordetella parapertussis]
          Length = 706

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 64/222 (28%), Gaps = 32/222 (14%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  A   +     +  SA+ +LPGP  V         + +     L    +   R    
Sbjct: 508 GIRTAPWRLCLDADSMGSALGSLPGPWAVKACSAQIPHKSEYGLVHLGIADEQRARALFP 567

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           +       +E+LG           G   + V V       RE  +    D   G +  + 
Sbjct: 568 M-----LRQEVLGM----------GKSFDGVIVASMVKPRREFMIGARWDSQFGCIVIVG 612

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
                 D  +  +  P     +   P     +E       +  L    R +       L 
Sbjct: 613 ------DGGKYVEAMPDVATLVY--PFDQAHAEQCLRKLRVAALFDGVRGENPLPVQELA 664

Query: 196 KAFCDKDMSL---------LEINPLIIMKNGRLRVLDSKISF 228
            A       L         ++INPLI   +GRL   D+ +  
Sbjct: 665 HAATRLGAWLHAQQGAVASVDINPLIAGPDGRLYAADALVEI 706


>gi|297200749|ref|ZP_06918146.1| phosphoribosylamine-glycine ligase [Streptomyces sviceus ATCC
           29083]
 gi|197712319|gb|EDY56353.1| phosphoribosylamine-glycine ligase [Streptomyces sviceus ATCC
           29083]
          Length = 417

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++      A+     P YVVK    A G+             
Sbjct: 106 AKEVMAAAEVPTARSYVCTTPEEVAEALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V S +++  +                        V +E+  D
Sbjct: 152 -GVVVTSDIEAATAHANA-----------------CERVVIEEFLD 179


>gi|220910350|ref|YP_002485661.1| CoA-binding domain-containing protein [Cyanothece sp. PCC 7425]
 gi|219866961|gb|ACL47300.1| CoA-binding domain protein [Cyanothece sp. PCC 7425]
          Length = 920

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK--SQIHAGGRGKGRFK 60
           + E +AK +L  Y +P  K  V +SV AA +  + L  P+ V+K  SQ     +      
Sbjct: 510 LTEAEAKQVLEAYGIPTVKVCVATSVGAAVAQAEQLGYPV-VLKLLSQTIT-HKTDVGGV 567

Query: 61  ELPADSKGGVRVESSLKSVISDIR 84
           +L    +  VR            +
Sbjct: 568 QLNLVDEIAVRWAYEKIQATVTAK 591



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 25/141 (17%)

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQDKVA 309
            + N  G  +   D +   GG  AN                      +D+ G AD D+ A
Sbjct: 323 IITNAGGPGVLATDALIATGGELANLSPATIAALNEILPPHWSHANPIDILGDADPDRYA 382

Query: 310 AAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
            A +I   D +  G+L+ +    + +   +   ++    +    + L   + G +V  G 
Sbjct: 383 KALEIAVRDPNSDGLLVILTPQAMTQPTQIAAALVPIAHQTDKPV-LASWMGGPSVAEGE 441

Query: 369 RLIAESGLNVITAIDLDDAAQ 389
            ++ +S  +V T    D AA+
Sbjct: 442 AILNQS--SVCTVPFPDSAAR 460


>gi|298209127|ref|YP_003717306.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
           [Croceibacter atlanticus HTCC2559]
 gi|83849054|gb|EAP86923.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
           [Croceibacter atlanticus HTCC2559]
          Length = 950

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 15/81 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ N+P  +  V  +   A +    L  P+ V  S +  G                G
Sbjct: 689 KLLQENNIPYPEFDVAETADEALAVADKLDFPILVRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDIREILGST 90
           +++  + + +   + ++L   
Sbjct: 734 MKIVINKQELEEHVVDLLRKI 754


>gi|322418174|ref|YP_004197397.1| phosphoribosylamine/glycine ligase [Geobacter sp. M18]
 gi|320124561|gb|ADW12121.1| phosphoribosylamine/glycine ligase [Geobacter sp. M18]
          Length = 423

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY+VP A   V + V AA   I     P+ V+K+   A G+             
Sbjct: 106 SKDLMQKYDVPTAAYGVFTEVPAAIDFIDRTGIPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +    ++ + ++L         G  G   + V +E+        +L+      
Sbjct: 152 -GVIIAQTRDEAVAAVTDML----SGNAFGAAG---SRVVIEEFLKGEEASFLAFT---D 200

Query: 128 SGMVAFIASTQG 139
              +  +AS Q 
Sbjct: 201 GERIIPLASAQD 212


>gi|149246383|ref|XP_001527661.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447615|gb|EDK42003.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 989

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 67/220 (30%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ + + +V  A  A + +  P+ V         R       L +       
Sbjct: 32  LKEINIPIAESIAVETVDDALKAAEEVGYPIIV---------RSAYSLGGLGSG------ 76

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 77  FAANEEELRNLSAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 123

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 124 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIIRHLGVVGECN 176

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 177 VQYALQPDGLDFRVIEVNARLSRSSALASKATGYPLAYTA 216


>gi|256809978|ref|YP_003127347.1| MGS domain protein [Methanocaldococcus fervens AG86]
 gi|256793178|gb|ACV23847.1| MGS domain protein [Methanocaldococcus fervens AG86]
          Length = 618

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 33/182 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+K N+P A+G    +   A    K +  P+ V  S +  G                 
Sbjct: 209 KLLKKLNIPQAEGGTAFTKEEALEIAKRIGYPVLVRPSYVLGG---------------RA 253

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S   +I  + E   +  ++++        + V ++   +   EL +  + D  S 
Sbjct: 254 MQIVYSEDELIEYMEE---AVKVSEE--------HPVLIDKFLEDAIELDVDAVCDGESV 302

Query: 130 MVAFIASTQGGMDIEEVAKDY---PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           ++  I        +          PQ + K +ID +I  T    A L   L + G   + 
Sbjct: 303 LIGAIMEHIEEAGVHSGDSATVIPPQTLPKEIIDTVIDYT----AKLARALNIVGLLNVQ 358

Query: 187 GG 188
             
Sbjct: 359 YA 360


>gi|224368044|ref|YP_002602207.1| PurD [Desulfobacterium autotrophicum HRM2]
 gi|223690760|gb|ACN14043.1| PurD [Desulfobacterium autotrophicum HRM2]
          Length = 587

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KYN+P A+G   +++  A++ +K +  P+ VVK+   A G+             
Sbjct: 106 AKNLMNKYNIPTAQGRSFNNIDKAKNYVKQIGAPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V ++       +  ++   L     G  G+ V    VE+        +++L 
Sbjct: 152 -GVFVCATEAEANQALDSLINENLF----GDAGTLV---VVEECLQGEEASFIALT 199


>gi|328883871|emb|CCA57110.1| Phosphoribosylamine--glycine ligase [Streptomyces venezuelae ATCC
           10712]
          Length = 445

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++   NVP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 135 AKDVMAGANVPTARSYVCTTPEEIDEALDAFGAP-YVVKDDGLAAGKG 181


>gi|315652432|ref|ZP_07905420.1| phosphoribosylamine-glycine ligase [Eubacterium saburreum DSM 3986]
 gi|315485331|gb|EFU75725.1| phosphoribosylamine-glycine ligase [Eubacterium saburreum DSM 3986]
          Length = 424

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 34/162 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A     +    A   +K    P+ V+K+   A G+             
Sbjct: 106 SKELMKKYGIPTADYEKFNDPQKALKYLKGADYPV-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +   + I E+    +I K  G  G   N V +E+  +      +S+L    
Sbjct: 152 -GVLICKNFEEAKTGIEEL----MIDKSFGDAG---NTVVIEEFLEGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLID 160
               A + S Q          G++   +    P   +   ID
Sbjct: 201 GTHYALMTSAQDHKRANDGDKGLNTGGMGTFSPSPFYTEEID 242


>gi|311114642|ref|YP_003985863.1| carbamoyl-phosphate synthase large subunit [Gardnerella vaginalis
           ATCC 14019]
 gi|310946136|gb|ADP38840.1| carbamoyl-phosphate synthase, large subunit [Gardnerella vaginalis
           ATCC 14019]
          Length = 1131

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 682 EVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLAKYVDRALQE--AQADTVVSGRLPSPLLIDKFLQDAIEIDVDALYDGNEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       AR   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTLSIARGCS 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VRGLINVQYAFMANTLYVIEANP 855



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         AK  +  S+   +  ++TL  P+ V         R       L +
Sbjct: 129 RELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  N V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNQEELHRIAGA-----------GIHYSPTNEVLIEEGIEGWKEFELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R S     +      +D   V       I    + P   +T  +   + D+
Sbjct: 222 -RDSKDNVVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKMRDI 267


>gi|326778288|ref|ZP_08237553.1| Phosphoribosylamine--glycine ligase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658621|gb|EGE43467.1| Phosphoribosylamine--glycine ligase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 416

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAGAGVPTARSYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|46198768|ref|YP_004435.1| phosphoribosylamine--glycine ligase [Thermus thermophilus HB27]
 gi|46196391|gb|AAS80808.1| phosphoribosylamine-glycine ligase [Thermus thermophilus HB27]
          Length = 461

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 15/82 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +Y +P A+  V      A + ++ +  P+ V               K+    + 
Sbjct: 149 AKGLMERYGIPTARYRVFREPLEALAYLEEVGVPVVV---------------KDSGLAAG 193

Query: 68  GGVRVESSLKSVISDIREILGS 89
            GV V   L      +  IL  
Sbjct: 194 KGVTVAFDLHQAKQAVANILNR 215


>gi|291531168|emb|CBK96753.1| carbamoyl-phosphate synthase large subunit [Eubacterium siraeum
           70/3]
          Length = 1075

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 50/182 (27%), Gaps = 28/182 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++   + + +  V  ++  A    + L  P+                 +        
Sbjct: 136 KNAMKDLGIGMPRSEVAYTIDEAVKIAEELKYPVV---------------LRPAYTMGGA 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  ++  +       L ++L           V  V VE+      EL L ++ D  +
Sbjct: 181 GGGMVYNVDELKVVCERGLQASL-----------VGQVLVEECIFGWEELELEVVRDADN 229

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          + +          +  +  D    +  E    + + +E+ G      
Sbjct: 230 NKITVCFIENIDPIGVHTGDSFCSAPMLTIPEDVQKELQ-EMSYRIIESIEVIGGCNCQF 288

Query: 188 GD 189
             
Sbjct: 289 AR 290



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +V  A      +  P+ V  S +  GGRG
Sbjct: 675 RAMMDKLGIPMPESGMAVNVDEALEIANRIGYPVMVRPSYVL-GGRG 720


>gi|195434184|ref|XP_002065083.1| GK14862 [Drosophila willistoni]
 gi|194161168|gb|EDW76069.1| GK14862 [Drosophila willistoni]
          Length = 1358

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P    VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYQALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V ++++     + EILG  
Sbjct: 160 -GVVVAANIEEACQAVDEILGQL 181


>gi|126433936|ref|YP_001069627.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium sp. JLS]
 gi|126233736|gb|ABN97136.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Mycobacterium
           sp. JLS]
          Length = 411

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 43/205 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L     P+ +   + +V    +    + GP+ V+K+ +  G  G+            GV 
Sbjct: 121 LEAMGAPIPRYTAVDTVDDVVAFSSEVGGPV-VLKT-VRGGYDGR------------GVV 166

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + +            L            G     +  E+  D+ RE  L+ LV R     
Sbjct: 167 LTADADEARDVAARYL----------ADGVP---ILAEERVDMRRE--LAALVAR----- 206

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V       I  +++ P   ++ +  +S    L L+  A +    +
Sbjct: 207 ----SPFGQGAAWPVVETVQRDGICVVVLAPAPELSDDLGSS-AQQLGLKLAAELGVVGV 261

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK 215
                + F   D  LL +N L +  
Sbjct: 262 LA--VELFETVDGRLL-VNELAMRP 283


>gi|91773116|ref|YP_565808.1| thiamine pyrophosphate enzyme-like TPP-binding [Methanococcoides
           burtonii DSM 6242]
 gi|91712131|gb|ABE52058.1| Protein containing N-terminal Pyruvate flavodoxin/ferredoxin
           oxidoreductase region, C-terminal TPP-binding region and
           ferredoxin domain [Methanococcoides burtonii DSM 6242]
          Length = 601

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           NA+ RH  +  ++D  +E+   +E    N   I     IG +   AG+A           
Sbjct: 200 NAVVRHPHLLSIQDGIQEE---LEISPWNELTINEASRIGVIA--AGIASVYAKEAIDNL 254

Query: 291 GAPANFLDVGGGADQD----KVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAV 346
           G  A++L +G     +    ++      +     ++ I+        RC ++ K + S++
Sbjct: 255 GVSASYLKIGAYPVPEGLIKRMYEQVDTVLVIEELEPIV------EDRCKIIAKDMESSI 308

Query: 347 KEVKINIPLVMRLEGANVDIGNRLIA-----ESGLNVITAIDLD 385
           K +      V R+   NVD   + IA     ESGL VI  I+++
Sbjct: 309 KIIGKTDGTVPRVGELNVDHCVKAIADVFKIESGLPVIKEIEME 352


>gi|309388429|gb|ADO76309.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Halanaerobium
           praevalens DSM 2228]
          Length = 387

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF------ 59
           YQ K +L++  + V     + S  A ++  K    P  ++KS    G  GKG F      
Sbjct: 109 YQQKKILKENQIAVPDFKKVDSPAAIKAKAKEFGYP-LMLKS-CRGGYDGKGNFLLKNEA 166

Query: 60  -KELPADSKGGVRVESSLKSVISDIREI 86
             E    + G  +    L+  I   +EI
Sbjct: 167 EVEAGFKALGAGKKSLMLEEFIPFKKEI 194


>gi|326318672|ref|YP_004236344.1| cyanophycin synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375508|gb|ADX47777.1| cyanophycin synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 861

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  ++ +  A    + +  P+ VVK Q   G +GKG    +   ++
Sbjct: 209 KRLLHAAGVPVPLGRPVADLEDAWKVAEEVGLPV-VVKPQ--DGNQGKGVTVNITTRAQ 264


>gi|94265558|ref|ZP_01289304.1| cyanophycin synthetase [delta proteobacterium MLMS-1]
 gi|93453928|gb|EAT04281.1| cyanophycin synthetase [delta proteobacterium MLMS-1]
          Length = 838

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           H+Y A  L+  + +PVA   + +++  A    + L  P+ V
Sbjct: 172 HKYVASHLMAGHGLPVAPAGLAANLEQAVKLAEQLGWPVVV 212


>gi|15669571|ref|NP_248384.1| carbamoyl-phosphate synthase subunit CarB2 [Methanocaldococcus
           jannaschii DSM 2661]
 gi|22095497|sp|Q58776|CARB2_METJA RecName: Full=Carbamoyl-phosphate synthase large chain, C-terminal
           section; AltName: Full=Carbamoyl-phosphate synthetase
           ammonia chain
 gi|1592027|gb|AAB99391.1| carbamoyl-phosphate synthase, large subunit (carB2)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 618

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 33/182 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+K N+P A+G    +   A    K +  P+ V  S +  G                 
Sbjct: 209 KLLKKLNIPQAEGGTAYTKEEALEIAKRIGYPVLVRPSYVLGG---------------RA 253

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S   +I  + E   +  ++++        + V ++   +   EL +  + D  S 
Sbjct: 254 MQIVYSEDELIEYMEE---AVKVSEE--------HPVLIDKFLEDAIELDVDAVCDGESV 302

Query: 130 MVAFIASTQGGMDIEEVAKDY---PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           ++  I        +          PQ + K +ID +I  T    A L   L + G   + 
Sbjct: 303 LIGAIMEHIEEAGVHSGDSATVIPPQTLPKEIIDTVIDYT----AKLARALNIVGLLNVQ 358

Query: 187 GG 188
             
Sbjct: 359 YA 360


>gi|317036661|ref|XP_001397805.2| carbamoyl-phosphate synthase (glutamine-hydrolysing) large subunit
           [Aspergillus niger CBS 513.88]
          Length = 1086

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL  + N+P+A+ + +S+V  A  A +T+  P+ V  +    G               
Sbjct: 224 SKAL-NEINIPIAESIAVSTVDEALKAAETVGYPIIVRSAYALGGL-------------- 268

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D  
Sbjct: 269 -GSGFAANPEELKNLSSRSLTLS-------------PQILVEKSLRGWKEVEYEVVRDAD 314

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 315 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVV 367

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 368 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 416


>gi|254512560|ref|ZP_05124626.1| CoA-binding protein [Rhodobacteraceae bacterium KLH11]
 gi|221532559|gb|EEE35554.1| CoA-binding protein [Rhodobacteraceae bacterium KLH11]
          Length = 672

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 70/222 (31%), Gaps = 36/222 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L    +P+ +   +SS   A +A + +  P  V                       
Sbjct: 477 SKQALTACGLPIPQNRTVSSATEARAAAQEMRAPFAVK------------GVGLAHKSEH 524

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLLVDR 126
             VR+    + V   +      T+ T +          V VE+     + EL + ++ D 
Sbjct: 525 SAVRLGVPAEDVTDVVA-----TIGTGE----------VLVEEMITGAVAELLIGVVRDP 569

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQARI 185
             G V  + +  GG+  E +       +     D    +   +    L            
Sbjct: 570 AHGFVLTLGA--GGVLTEILRDTTSLLLPSTPGDIRAALGKLKIAPLLAGYRGQPAADMD 627

Query: 186 DGGDLFPNLYKAFCDKDMSLL---EINPLIIMKNGRLRVLDS 224
                   + +A+  ++   L   EINPL+   + R   +D+
Sbjct: 628 AIIAAVEAV-QAYVMQNADTLGEVEINPLLCTPD-RAVAVDA 667


>gi|167750864|ref|ZP_02422991.1| hypothetical protein EUBSIR_01847 [Eubacterium siraeum DSM 15702]
 gi|167656043|gb|EDS00173.1| hypothetical protein EUBSIR_01847 [Eubacterium siraeum DSM 15702]
          Length = 1072

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 50/182 (27%), Gaps = 28/182 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++   + + +  V  ++  A    + L  P+                 +        
Sbjct: 133 KNAMKDLGIGMPRSEVAYTIDEAVKIAEELKYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  ++  +       L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGMVYNVDELKVVCERGLQASL-----------VGQVLVEECIFGWEELELEVVRDADN 226

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          + +          +  +  D    +  E    + + +E+ G      
Sbjct: 227 NKITVCFIENIDPIGVHTGDSFCSAPMLTIPEDVQKELQ-EMSYRIIESIEVIGGCNCQF 285

Query: 188 GD 189
             
Sbjct: 286 AR 287



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +V  A      +  P+ V  S +  GGRG
Sbjct: 672 RAMMDKLGIPMPESGMAVNVDEALKIANRIGYPVMVRPSYVL-GGRG 717


>gi|77166279|ref|YP_344804.1| phosphoribosylamine--glycine ligase [Nitrosococcus oceani ATCC
           19707]
 gi|76884593|gb|ABA59274.1| phosphoribosylamine--glycine ligase [Nitrosococcus oceani ATCC
           19707]
          Length = 437

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+    S V  A + I+T   P+ VVK+   A G+             
Sbjct: 108 AKEFLIRWGIPTARYQTFSQVEPAIAYIRTEGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ +  +LG        G  G RV    VE+      E    ++ D  
Sbjct: 154 -GVVVAQTEEEAIAAVHRMLG----DGVFGEAGCRV---VVEEFLT-GEEASFIVMSDGE 204

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
             +   +AS Q     EE  +
Sbjct: 205 HILP--LASAQDHKAREEGDR 223


>gi|83591392|ref|YP_425144.1| biotin carboxylase [Rhodospirillum rubrum ATCC 11170]
 gi|83574306|gb|ABC20857.1| Biotin carboxylase [Rhodospirillum rubrum ATCC 11170]
          Length = 662

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 70/215 (32%), Gaps = 32/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L  K  V    G   VI     A      +  P+ +  S                 
Sbjct: 118 ESKKLAAKAGVSTVPGYMGVIKDAEEAARIASEIGFPVMIKAS---------------AG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+RV  S++          G    T +   +    + V++E   +  R + + +L 
Sbjct: 163 GGGKGMRVAWSVEEARE------GFVSATNEAKSSFGD-DRVFIEKFIEQPRHIEIQILA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D  + +       +    I+   +   ++     + P +     E   +L  +++ +   
Sbjct: 216 DGETYLYV----NERECSIQRRNQKVVEEAPSPFLTPEVRKAMGEQAVALAKVVDYKSAG 271

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            I+   D   N Y  F + +  L   +P+  M  G
Sbjct: 272 TIEFIVDAARNFY--FLEMNTRLQVEHPVTEMITG 304


>gi|330466462|ref|YP_004404205.1| CoA-binding domain-containing protein [Verrucosispora maris
           AB-18-032]
 gi|328809433|gb|AEB43605.1| CoA-binding domain-containing protein [Verrucosispora maris
           AB-18-032]
          Length = 851

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 74/225 (32%), Gaps = 26/225 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL  Y + V + V + S   A  A   L  P+ +  +   +G R +     +  D    
Sbjct: 641 ALLAAYGIEVVQSVSVGSADEAVEAATRLGFPVALKVA--ASGLRHRLDLGAVRLDLADE 698

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             V  +   + +      G+ ++ +   P G       VED A                 
Sbjct: 699 AAVRRTYAELAAA----FGADVLVQPMVPPGVACVVELVEDPAF---------------- 738

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQARIDGG 188
               +    GG+  E +     + +     D    V +   A L       +   R    
Sbjct: 739 GPV-VGFGLGGVATELLGDRAWRAVPLTDRDAAELVDAPRAAPLLHGHRGAEPVDRAALA 797

Query: 189 DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           DL   + +   ++  +  L +NP++   +G L VL + +     A
Sbjct: 798 DLLMRVGRLADEQPRVRSLTLNPVLARPDG-LSVLHASVGVGSAA 841


>gi|308235734|ref|ZP_07666471.1| carbamoyl-phosphate synthase large chain [Gardnerella vaginalis
           ATCC 14018]
          Length = 499

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +   +     S+  A+ A   +  P+ V  S +  G                G
Sbjct: 50  EVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSYVLGG---------------RG 94

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L        T  +G   + + ++       E+ +  L D    
Sbjct: 95  MEIVYDDAQLAKYVDRALQE--AQADTVVSGRLPSPLLIDKFLQDAIEIDVDALYDGNEL 152

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       AR   
Sbjct: 153 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTLSIARGCS 200

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 201 VRGLINVQYAFMANTLYVIEANP 223


>gi|319761497|ref|YP_004125434.1| cyanophycin synthetase [Alicycliphilus denitrificans BC]
 gi|317116058|gb|ADU98546.1| cyanophycin synthetase [Alicycliphilus denitrificans BC]
          Length = 863

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  ++ VH A    + +  P+ VVK Q   G +GKG    +   ++
Sbjct: 209 KRLLHAAGVPVPLGRPVADVHDAWKVAEEVGLPV-VVKPQ--DGNQGKGVTVNITTRAQ 264


>gi|239988992|ref|ZP_04709656.1| phosphoribosylamine--glycine ligase [Streptomyces roseosporus NRRL
           11379]
          Length = 416

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAGAGVPTARSYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|254436035|ref|ZP_05049542.1| phosphoribosylamine--glycine ligase [Nitrosococcus oceani AFC27]
 gi|207089146|gb|EDZ66418.1| phosphoribosylamine--glycine ligase [Nitrosococcus oceani AFC27]
          Length = 448

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+    S V  A + I+T   P+ VVK+   A G+             
Sbjct: 119 AKEFLIRWGIPTARYQTFSQVEPAIAYIRTEGAPI-VVKADGLAAGK------------- 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ +  +LG        G  G RV    VE+      E    ++ D  
Sbjct: 165 -GVVVAQTEEEAIAAVHRMLG----DGVFGEAGCRV---VVEEFLT-GEEASFIVMSDGE 215

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
             +   +AS Q     EE  +
Sbjct: 216 HILP--LASAQDHKAREEGDR 234


>gi|55980781|ref|YP_144078.1| phosphoribosylamine--glycine ligase [Thermus thermophilus HB8]
 gi|55772194|dbj|BAD70635.1| phosphoribosylamine--glycine ligase [Thermus thermophilus HB8]
          Length = 417

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 15/82 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +Y +P A+  V      A + ++ +  P+ V               K+    + 
Sbjct: 105 AKGLMERYGIPTARYRVFREPLEALAYLEEVGVPVVV---------------KDSGLAAG 149

Query: 68  GGVRVESSLKSVISDIREILGS 89
            GV V   L      +  IL  
Sbjct: 150 KGVTVAFDLHQAKQAVANILNR 171


>gi|116670189|ref|YP_831122.1| GCN5-related N-acetyltransferase [Arthrobacter sp. FB24]
 gi|116610298|gb|ABK03022.1| GCN5-related N-acetyltransferase [Arthrobacter sp. FB24]
          Length = 901

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 70/236 (29%), Gaps = 41/236 (17%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y + V       +   A +A + L  P+ V+K+   A  R +     +  D +   
Sbjct: 686 LLAHYGIHVVPSEGFETPDQAVAAAERLGWPV-VLKTTDPAL-RHRLDLGGVRLDIQDAD 743

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
            +  ++  +   +      ++  +   P G       +ED                    
Sbjct: 744 SLRRNIVEMHRALAPYGSPSMEVQTMAPVGQACTFRAIEDPL----------------LG 787

Query: 131 VAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVT-------SEDVASLCDMLELQG 181
                   G     +E+ A   P         PL G               L     L  
Sbjct: 788 PVVSFGLAGDAVNLLEDWAHRVP---------PLSGADVHDFIRAPRAARKLFGYQGLPA 838

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINP-LIIMKNGRLRVLDSKISFDDNALYR 235
                  D+   L +   +  +++L+E NP L   +   +   D +I+   NA  R
Sbjct: 839 VDVAALEDIAARLTRLKDNHPEIALIEFNPVLAGQRGASILAADVRIA---NAAQR 891


>gi|317054991|ref|YP_004103458.1| phosphoribosylamine/glycine ligase [Ruminococcus albus 7]
 gi|315447260|gb|ADU20824.1| phosphoribosylamine/glycine ligase [Ruminococcus albus 7]
          Length = 451

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A   V     +A + +K       V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYEVFKDSESAIAYVKQQNTYPAVIKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV +  + +  ++ I+E++
Sbjct: 153 -GVILAQNEEEAVTAIKEMI 171


>gi|296133333|ref|YP_003640580.1| carbamoyl-phosphate synthase, large subunit [Thermincola sp. JR]
 gi|296031911|gb|ADG82679.1| carbamoyl-phosphate synthase, large subunit [Thermincola potens JR]
          Length = 1074

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+   +P   G   +SV  A+   + +  P+ V  S +  G                 
Sbjct: 679 QLLQDLGIPKPPGRTATSVEGAQEIAEEIGFPVLVRPSYVLGG---------------RA 723

Query: 70  VRVESSLKSVISDIREILG---STLITKQTGPTGSRVNCVYVEDGADI 114
           + +  +   ++  ++  +       +       G  +    + DG D+
Sbjct: 724 MEIVYNQDELLEYMKSAVNVSPKHPVLVDKYLVGKEIEVDAISDGEDV 771


>gi|271962879|ref|YP_003337075.1| phosphoribosylaminoimidazole carboxylase [Streptosporangium roseum
           DSM 43021]
 gi|270506054|gb|ACZ84332.1| Phosphoribosylaminoimidazole carboxylase [Streptosporangium roseum
           DSM 43021]
          Length = 380

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 62/200 (31%), Gaps = 54/200 (27%)

Query: 7   QAKALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           Q KA++R+      VP      I++    E        P+ V+K+ +  G  G+      
Sbjct: 104 QDKAVMRERLTAIGVPCPPWRRIATAADVEEFAADNGWPV-VLKA-VRGGYDGR------ 155

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV +  S +     +               +G     +  E      RE  L++
Sbjct: 156 ------GVWICRSAEDAAEVL--------------ASGVP---LMAEAFVPFERE--LAV 190

Query: 123 LVDRTSGMVAFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLC 174
           LV R         S  G G+    V       I   +I P  G+  E  A       ++ 
Sbjct: 191 LVAR---------SPHGQGVSYPVVETVQRDGICVEVIAPAPGLDPEQAAAAQRIALTIA 241

Query: 175 DMLELQGQARIDGGDLFPNL 194
             L + G   ++       L
Sbjct: 242 HELGVSGLLAVEMFATASGL 261


>gi|257459192|ref|ZP_05624311.1| carbamoyl-phosphate synthase, large subunit [Campylobacter gracilis
           RM3268]
 gi|257443577|gb|EEV18701.1| carbamoyl-phosphate synthase, large subunit [Campylobacter gracilis
           RM3268]
          Length = 1087

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + + K     ++  A +A   +  PL +  S    G                
Sbjct: 131 KEAMIKIGMDLPKSKYAYNIEEAMAAANEIGFPLIIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++                  Q G   S +N + +E+     +E  + ++ D   
Sbjct: 176 GSGVAYNIDEFKEVA-----------QNGLDVSPINEILIEESLLGWKEFEMEVIRDHKD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++  ++ D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQAMRDA 265


>gi|302551901|ref|ZP_07304243.1| phosphoribosylglycinamide formyltransferase 2 [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469519|gb|EFL32612.1| phosphoribosylglycinamide formyltransferase 2 [Streptomyces
           viridochromogenes DSM 40736]
          Length = 410

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 65/261 (24%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  +  ++S      +      G   V+K+ +  G  GK            GV V  S
Sbjct: 145 GVPCPRHRIVSDPQDVAAFAAEGDGFPVVLKT-VRGGYDGK------------GVWVVDS 191

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSGMVAF 133
           ++      +               G  V     E+  D LREL  +++      +     
Sbjct: 192 VEEAADPFK--------------AGVPV---LAEEKVDFLRELAANVVRSPHGQAVAYPV 234

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-------SEDVASLCDMLELQGQARID 186
           + S Q G             +   +I P  G+        SE   ++   L + G   ++
Sbjct: 235 VESRQVGG------------VCDTVIAPAPGLDEDLAVRASEMALNIAKELGVVGHLAVE 282

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSKISFDDNALYRHLDIQELRD 244
                      F  +D  +L +N L +    +G   +  +  S   N +   LD+  L D
Sbjct: 283 ----------LFQTRDGRIL-VNELAMRPHNSGHWSMDGAVTSQFANHVRAVLDLP-LGD 330

Query: 245 VSEEDSREIEAKQHNLSYIAL 265
                   +        Y  +
Sbjct: 331 PRPRAPWTVMVNVLGGDYPDM 351


>gi|301793364|emb|CBW35728.1| phosphoribosylamine-glycine ligase [Streptococcus pneumoniae
           INV104]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +++  +    E+L    +  + G +G+RV
Sbjct: 153 -GVVVSETVEQAVEAAHEML----LDNKFGDSGARV 183


>gi|271966183|ref|YP_003340379.1| acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270509358|gb|ACZ87636.1| Acyl-CoA synthetase (NDP forming)-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 883

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 47/246 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A  LL  Y + +A+ +      +A +A  T+  P  V+K+              +     
Sbjct: 667 AARLLGCYGIQMAESIEADGPDSAAAAAVTIG-PPVVLKA---------TGPDLVHKSDV 716

Query: 68  GGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           GGVRV   +   V    RE+ G          TG+ V    +E G +I+    +  +   
Sbjct: 717 GGVRVGLGAPDEVSRAYREMAGMIGPAM----TGAIVQP-MIEAGVEII----IGGVAH- 766

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------EL 179
            +     +    GG+  E +A           + PL     +D A++   L         
Sbjct: 767 EAFGPMLMV-GMGGVTAELMADRS------FRVPPLG---DQDAAAMIAELRCAPLLTGY 816

Query: 180 QGQARIDGGDL---FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA--- 232
           +G+ R D   L      + +   D  +++ L++NP+I+   G +  +D ++     A   
Sbjct: 817 RGRPRADVAALREQITGVGRLLDDLPEVAELDLNPVIVTPAGAV-AVDVRVRLAPAAPPP 875

Query: 233 -LYRHL 237
            L+R  
Sbjct: 876 SLFRRR 881


>gi|258510191|ref|YP_003183625.1| cyanophycin synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476917|gb|ACV57236.1| cyanophycin synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 881

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 14/103 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  + V  G V      A    + L GP  VVK         +G+   L  +S+ 
Sbjct: 219 KRLLDEAGLAVPPGGVAVDEDEAVLLWRHLDGP-AVVKP----LDARQGQGVSLRLESEA 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
            VR     +      RE++       +    G  V  V V DG
Sbjct: 274 EVRAAF--REAKRYAREVI------VEAYVPGENV-RVLVVDG 307


>gi|182437652|ref|YP_001825371.1| phosphoribosylamine--glycine ligase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178466168|dbj|BAG20688.1| putative phosphoribosylglycinamide synthetase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 416

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAGAGVPTARSYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|167646420|ref|YP_001684083.1| CoA-binding domain-containing protein [Caulobacter sp. K31]
 gi|167348850|gb|ABZ71585.1| CoA-binding domain protein [Caulobacter sp. K31]
          Length = 893

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 29/150 (19%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGA----------------PA-----NFLDVGGGADQD 306
            +  + NG G  +  +D +   GG                 PA     N +D+ G A  +
Sbjct: 298 RLAIVTNGGGAGILALDAMASSGGVLAELGPETLERLNTALPAGWSRGNPVDLVGDAPAE 357

Query: 307 KVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILS---AVKEVKINIPLVMRLEG- 361
           +   A   + SD+ V  +L+ N    + +   + +G+ +   A +   +  P++    G 
Sbjct: 358 RYRVALDAVLSDAGVDAVLVMNCPTALAQPGDIARGVAASVVAARGRGVRKPVIACWLGD 417

Query: 362 ANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           AN D    +++  G+ +  A    DAA + 
Sbjct: 418 ANQDAAGPILSACGVPMFGAP---DAAARA 444



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 74/237 (31%), Gaps = 34/237 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           ++E +AK LL  Y V      + ++          L  P  + +V  QI           
Sbjct: 490 LNEVEAKTLLSAYGVATVPTRLAATARDVAKLCADLAPPYAIKIVSPQIV---------- 539

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLIT-KQTGPTGSRVNCVYVEDGADILRELY 119
              +D  G V    + ++  +    +      T  +   TG  V    +  G     EL 
Sbjct: 540 -HKSDVGGVVLDLPNAEAASAAAEAMGARIAKTCPEAVITGFAVET-MIAPGR--AHELI 595

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-------VTSEDVAS 172
           + L  D  +     +    GG  +E +          L + PL G         +     
Sbjct: 596 VGLAQD-VTFGPVLMV-GAGGKAVEVLKDRA------LGLPPLDGDLAQAMIAKTRISRL 647

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           L    +               L     D  D+  L+INPL +   G +  LD++I  
Sbjct: 648 LAGYRDEPQADIAGVVATLKALSAIAIDLPDIVELDINPLRVDATG-VLALDARIVI 703


>gi|62471619|ref|NP_001014477.1| adenosine 3, isoform B [Drosophila melanogaster]
 gi|157481|gb|AAA28562.1| Gart polypeptide 1.7 kb transcript [Drosophila melanogaster]
 gi|61678291|gb|AAX52661.1| adenosine 3, isoform B [Drosophila melanogaster]
 gi|157816764|gb|ABV82375.1| LD26552p [Drosophila melanogaster]
 gi|162944752|gb|ABY20445.1| IP15613p [Drosophila melanogaster]
          Length = 434

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++ P P  VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V ++ K     + EILG
Sbjct: 160 -GVVVAANAKEACQAVDEILG 179


>gi|323702698|ref|ZP_08114359.1| CoA-binding domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323532361|gb|EGB22239.1| CoA-binding domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 701

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 24/156 (15%)

Query: 263 IALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGG 301
           +     +  + N  G  + T+D I+  G   A F                     +DV G
Sbjct: 295 VPQGDRVAIVTNAGGPGIVTVDAIENSGLMVARFDKETLDALRANLPTQANIYNPVDVLG 354

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
            A  D+   A + +  D  V  +++ +        + + + I+   ++      L + + 
Sbjct: 355 DAQSDRYGFALETVLKDPYVDSVVVLVCPTTATDPENIAQTIIDLNQKYPHKPILAVYMG 414

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           GA +    +++A + + V T    + A   +   VK
Sbjct: 415 GAVLAESAKILARARIPVFTFP--EPAVNSLAGMVK 448



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 84/233 (36%), Gaps = 35/233 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A A+   Y +P A   + +S   A +  + +  P+ +  +      +      ++   +
Sbjct: 491 EAAAVAEAYGIPAAPIKLSTSPDEAVALAEKMGYPVVLKVASPKIMHKTDVGGVKIGLTN 550

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              VR       ++ +++  L + +      P G  V+ +          EL + +  D 
Sbjct: 551 SDQVRDAF--IEIMENVQRYLPNVI------PYGIEVSKMM-----PKGTELIVGMTKDV 597

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML--------- 177
             G    IA   GGM        Y   +  +      G+T E++ ++             
Sbjct: 598 QFG--PLIAFGLGGM--------YVNLLKDVSFRLAKGLTREEIQAMISETKAFTLLRGY 647

Query: 178 -ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              +    I   D+     K   D  ++S ++INPL   ++G +  LD KI+ 
Sbjct: 648 RGERPADMISLIDMVARTAKLVTDFPEISEMDINPLFAYEDG-VSALDIKITI 699


>gi|298252869|ref|ZP_06976663.1| D-alanine-D-alanine ligase [Gardnerella vaginalis 5-1]
 gi|297533233|gb|EFH72117.1| D-alanine-D-alanine ligase [Gardnerella vaginalis 5-1]
          Length = 380

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 64/216 (29%), Gaps = 23/216 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE-LPA 64
           Y AK L +   + VA G+ + +   A  A          + +Q+ A       F +   A
Sbjct: 147 YYAKQLFKAAGINVAPGIALDARKFASDAKNRFDAYAEEILAQVEAAKLEYPLFVKPSRA 206

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S  GV    S     +    I  ++               V VE G D  RE+  ++L 
Sbjct: 207 GSSFGVTKVESRD-AKALAEAIFEASEHDW----------RVLVEQGID-AREIECAVLA 254

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
            R        AS  G     EV  D  +       D          + +     L  +  
Sbjct: 255 ARDGEEP--KASWPG-----EVVLDKREAGEDQFYDFDSKYMDSAASHVEVPANLPAETL 307

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
                       AF   D   L      + K+GR+ 
Sbjct: 308 ERVRKTALA---AFKAADGRGLSRVDSFVTKDGRVI 340


>gi|163781911|ref|ZP_02176911.1| pyruvate carboxylase n-terminal domain [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159883131|gb|EDP76635.1| pyruvate carboxylase n-terminal domain [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 472

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +++K  VPV  G   V+  V  A++  K +  P+  +K+         G        
Sbjct: 118 SKEVMKKAGVPVVPGSDGVLKDVEEAKALAKEIGYPVL-LKA-------TAGGGGRGIRI 169

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +    +  + +S  ++ ++  G                 + +E   +  R +   +L D
Sbjct: 170 CRNEEELVKNYESAYNEAQKAFG--------------CGDLLLEKFIENPRHIEFQVLGD 215

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           +       I   +    I+   +   +    LL+ P       E VA     +       
Sbjct: 216 KHGN---VIHLGERDCSIQRRNQKLVEIAPSLLLTPEKRAHYGEIVAKAAKEIGYYNAGT 272

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           ++   D   NLY  F + +  +   +P+  M  G
Sbjct: 273 MEFIADEEGNLY--FIEMNTRVQVEHPVSEMITG 304


>gi|15611920|ref|NP_223571.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           J99]
 gi|22095543|sp|Q9ZKT2|CARB_HELPJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|4155424|gb|AAD06431.1| CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN [Helicobacter pylori J99]
          Length = 1085

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAISEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
                +           IE +          + I P + +T ++   + D 
Sbjct: 222 GKDNCIIVCC-------IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 38/201 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++   +  +  SV  A S    +  P+ V  S +  G                 ++
Sbjct: 681 LKELDIKQPENGMAKSVDEAYSIANAIGFPIIVRPSYVLGGQH---------------MQ 725

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  +++ +       L S   + +  P     N + ++   +   EL +  + D+    +
Sbjct: 726 ILENIEELRHY----LESVTHSLEISPK----NPLLIDKFLEKAVELDVDAICDKKEVYI 777

Query: 132 AFIAST--QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           A I     + G+   + A   P  +   ++D +  V+    A +   L + G   I    
Sbjct: 778 AGILQHIEEAGIHSGDSACFIPSTLSPEILDEIERVS----AKIALHLGVVGLLNIQFAV 833

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              +LY         L+E+NP
Sbjct: 834 YQNSLY---------LIEVNP 845


>gi|330823366|ref|YP_004386669.1| cyanophycin synthetase [Alicycliphilus denitrificans K601]
 gi|329308738|gb|AEB83153.1| cyanophycin synthetase [Alicycliphilus denitrificans K601]
          Length = 863

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  ++ VH A    + +  P+ VVK Q   G +GKG    +   ++
Sbjct: 209 KRLLHAAGVPVPLGRPVADVHDAWKVAEEVGLPV-VVKPQ--DGNQGKGVTVNITTRAQ 264


>gi|307243666|ref|ZP_07525806.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492875|gb|EFM64888.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Peptostreptococcus stomatis DSM 17678]
          Length = 474

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K ++++  VPV +G   V+ ++  A+  ++ L  P+ ++K++   GG+G
Sbjct: 142 SKKMMKEAGVPVVEGSDGVVENLEEAKEVLERLGLPV-IIKARSGGGGKG 190


>gi|283955248|ref|ZP_06372749.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283793285|gb|EFC32053.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRMD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     +       
Sbjct: 225 NCIIV-------CSIENIDPMGIHTGDSITIAPALTLTDKEYQIMRNASFA 268


>gi|296104257|ref|YP_003614403.1| GCN5-related N-acetyltransferase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058716|gb|ADF63454.1| GCN5-related N-acetyltransferase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 887

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 74/249 (29%), Gaps = 32/249 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILGSYGMQTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              +D +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSDVQGVMLYLRTAAEVQQAADAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-------VTSEDVAS 172
           + ++          +   +GG++        P++   + + PL         + +     
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLIIQAIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           +     L+             +     D  ++  L+I+PL+   N     LD  +     
Sbjct: 639 IRGRSALRPLDIAGLSQFLVQVSNLIVDCAEIQRLDIHPLLASGN-EFTALDVTLDIAPF 697

Query: 232 ALYRHLDIQ 240
              R   + 
Sbjct: 698 EGDRESRLA 706


>gi|294507635|ref|YP_003571693.1| phosphoribosylaminoimidazole carboxylase ATPase-subunit
           [Salinibacter ruber M8]
 gi|294343963|emb|CBH24741.1| phosphoribosylaminoimidazole carboxylase ATPase-subunit
           [Salinibacter ruber M8]
          Length = 379

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 19/158 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L     PV       ++  A  A +    P+ V+K       RG             
Sbjct: 108 KQHLADAGCPVPTFACCETLDEALDAAEEFGYPV-VLKQ-----YRGAYDGYGNAT---- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY-LSLLVDRT 127
                +S   +     ++        +T    +R   V V       + +Y ++    R 
Sbjct: 158 ----AASEDELREAWPDLATEDGAMVETFADFARELAVQVARRPGGNQVVYPVAYTEQRD 213

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
               A     +   DI++   D  + I +  +D + GV
Sbjct: 214 HRCHAV----EVPADIDDAIADKARHIAQKSVDAVEGV 247


>gi|170046513|ref|XP_001850807.1| phosphoribosylamine-glycine ligase [Culex quinquefasciatus]
 gi|167869284|gb|EDS32667.1| phosphoribosylamine-glycine ligase [Culex quinquefasciatus]
          Length = 275

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 22/143 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A+    +    A++ I +      VVK+   A G+             
Sbjct: 113 SKDFMHRHGIPTARYSSFTKAEEAKAFINSASYEALVVKASGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +     + + EILG     K+ G  G  V    VE+      E+ +   VD  
Sbjct: 160 -GVIVAENEAQACAAVDEILG----DKKFGSAGDVV---VVEEKLS-GEEVSVLAFVDSK 210

Query: 128 SGMVAFIASTQGGMDIEEVAKDY 150
           +  V   A     +  E+   + 
Sbjct: 211 TVRVMLPAQDHKRLQNEDRGPNT 233


>gi|33865364|ref|NP_896923.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. WH
           8102]
 gi|33632533|emb|CAE07345.1| carbamoyl phosphate synthetase, large subunit [Synechococcus sp. WH
           8102]
          Length = 1107

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + S++  AE+    +     +++     GG G G           
Sbjct: 133 KQAMERIGVQVCPSGIASTLEEAEAVGAAIGSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEYAAICK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRD-QA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVILCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|84496205|ref|ZP_00995059.1| hypothetical protein JNB_01760 [Janibacter sp. HTCC2649]
 gi|84382973|gb|EAP98854.1| hypothetical protein JNB_01760 [Janibacter sp. HTCC2649]
          Length = 892

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKELPADSKG 68
           ALL  Y + V     ++++  A  A + +  P+ V+KS       +G      +   ++ 
Sbjct: 677 ALLAAYGIEVWPSRKVTTIDEAVEAAEDIGYPV-VLKSTAPMLRHQGGVTGVRVDLGTEQ 735

Query: 69  GVRVESS 75
            VR   +
Sbjct: 736 SVREAWA 742


>gi|296168925|ref|ZP_06850594.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896394|gb|EFG76047.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 388

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 71/220 (32%), Gaps = 59/220 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
           +VPV +   I+++    +  + + GP+ VVK+ +  G  G+            GVR+   
Sbjct: 107 DVPVPRYAEIATLDELAAFARRIAGPV-VVKA-VRGGYDGR------------GVRMARD 152

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
                      L            G  V     E+   + RE  LS LV R         
Sbjct: 153 PSHAREIAAGFL----------ADGVPV---MAEEQVSLRRE--LSALVAR--------- 188

Query: 136 STQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQARIDG 187
           S  G G     V       I   ++ P  G+     A        L   L + G   ++ 
Sbjct: 189 SPFGQGAAWPVVETVQRDGICVQVVAPAPGLAQHVAADAQQLALRLAGELGVVGVLAVE- 247

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSK 225
                     F   D +LL +N L +    +G   +  ++
Sbjct: 248 ---------LFETTDGALL-VNELAMRPHNSGHWTMDGAR 277


>gi|315502624|ref|YP_004081511.1| CoA-binding domain protein [Micromonospora sp. L5]
 gi|315409243|gb|ADU07360.1| CoA-binding domain protein [Micromonospora sp. L5]
          Length = 851

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 6/106 (5%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A ALLR Y + V + V   S     +A + L  P+ +  +      R       L    
Sbjct: 638 DAAALLRAYGIDVVESVPAGSAEEVLAAAERLGRPVALKAAAPGLRHRLDLGAVRLDLTD 697

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
              +R         +++  + G+ ++ +     G       VED A
Sbjct: 698 AAALRR------AYAEMAPVFGAEVLVQPMVAPGVACVVELVEDPA 737


>gi|268610484|ref|ZP_06144211.1| carbamoyl phosphate synthase large subunit [Ruminococcus
           flavefaciens FD-1]
          Length = 1073

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 50/182 (27%), Gaps = 28/182 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + K  V  +V  A    + L  P+                 +        
Sbjct: 133 KNAMSELGIGMPKSEVAYTVDEAVKIAEKLRYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  ++  +       L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGMVYNVDELKVVCARGLQASL-----------VGQVLVEECIFGWEELELEVVRDAEN 226

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          + +          +  +  D    +  E    + + +E+ G      
Sbjct: 227 NKITVCFIENIDPIGVHTGDSFCSAPMLTIPEDVQKELQ-EMSYKIIESIEVIGGCNCQF 285

Query: 188 GD 189
             
Sbjct: 286 AR 287



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +   A +    +  P+ V  S +  GGRG
Sbjct: 673 RAMMDKLGIPMPEAGMAVNADEAIAIANKIGYPVMVRPSYVL-GGRG 718


>gi|222109851|ref|YP_002552115.1| cyanophycin synthetase [Acidovorax ebreus TPSY]
 gi|221729295|gb|ACM32115.1| cyanophycin synthetase [Acidovorax ebreus TPSY]
          Length = 861

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 12/90 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  ++ V  A    + +  P+ VVK Q   G +GKG    +      
Sbjct: 209 KRLLHAAGVPVPLGRPVADVEDAWVVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTREG- 264

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGP 98
                  L++     RE  G  ++ ++  P
Sbjct: 265 -------LEAAYKTARE-FGDEIMVERFLP 286


>gi|157143824|emb|CAL47325.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 97

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIEDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPL 355
           +  ++ I G I     + K   GI+ A +E      +
Sbjct: 61  RDKILIIGGAIANFTDVAKTFTGIIQAFEEYADKRKM 97


>gi|148269613|ref|YP_001244073.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Thermotoga
           petrophila RKU-1]
 gi|147735157|gb|ABQ46497.1| phosphoribosylaminoimidazole carboxylase [Thermotoga petrophila
           RKU-1]
          Length = 380

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 55/157 (35%), Gaps = 23/157 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+K  +PV +   +  +    S ++    P+ V K++            +   D + 
Sbjct: 105 KEFLKKNGIPVPRYKPVKDLE---SDVREFGFPV-VQKARKGGYDGRGVFIIKNEKDLEN 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++ E+ L+  +   +E+     +       G        E     + E+Y     +  +
Sbjct: 161 AIKGETYLEEFVEIEKEL----AVMVARNEKG--------ETACYPVVEMYF---DEDAN 205

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
                IA       IEE      ++I   +++ L GV
Sbjct: 206 ICDTVIA----PARIEEKHSKIAREIATSVVEALEGV 238


>gi|307353661|ref|YP_003894712.1| carbamoyl-phosphate synthase large subunit [Methanoplanus
           petrolearius DSM 11571]
 gi|307156894|gb|ADN36274.1| carbamoyl-phosphate synthase, large subunit [Methanoplanus
           petrolearius DSM 11571]
          Length = 1055

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 75/213 (35%), Gaps = 43/213 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+     P+ + +++ S+   ++A++ +  P  +  +    G             + G
Sbjct: 131 RDLMNDIGEPIPRSMILRSMDQLDNALEIVGLPAIIRPAYTLGG-------------AGG 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    + + +   +             G   SR++ V +E+     +E+   ++  R S
Sbjct: 178 GV--AHTPEELRKIVE-----------IGLQRSRIHQVLIEESVMGWKEIEYEVM--RDS 222

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                I    G  +++ +     + +    I    D    +       +   L++QG   
Sbjct: 223 FDTCLIVC--GMENVDAMGIHTGESVVVAPILTLTDEEFHLLRTAAIKIIRALDVQGGCN 280

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I           AF D D  ++E+NP +   + 
Sbjct: 281 IQM---------AFKDGDYRIIEVNPRVSRSSA 304


>gi|302557244|ref|ZP_07309586.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces
           griseoflavus Tu4000]
 gi|302474862|gb|EFL37955.1| acetyl coenzyme A synthetase (ADP forming) [Streptomyces
           griseoflavus Tu4000]
          Length = 715

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 21/219 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    + + V  A +      GP+ +             +        
Sbjct: 29  EGKVIADAYGISVPGEELATDVDEAVACAARFGGPVVM-------------KIVSPDILH 75

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           K             +++R      +   +     +R++ V V++     +E+ +  + D 
Sbjct: 76  KTDAGGVVVGVEGAAEVRAAFCRIVGNARAYAPDARIDGVQVQELLPEGQEVIVGAVTDP 135

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS----EDVASLCDMLELQGQ 182
           T G V       GG+ +E +     +       + L  + S    E +  +     +   
Sbjct: 136 TFGKVVAFG--LGGVLVEVLKDVTFRLAPVEADEALSMLDSIRSAEVLRGVRGRAGVDRW 193

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           A  +       L   F +  ++ +++NP+I   +G +  
Sbjct: 194 AVAEQIRRVSALVTDFPE--IAEVDLNPVIATADGAVAA 230



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV------NGAGLAMATMDIIKL 288
           R   + ++ + +         +  N+  I   G  G ++      NG  L     D+   
Sbjct: 526 RAPGLHDMLEYARALPVLPAPRGDNVVIITGAGGSGVLLSDAVTDNGLSLMEIPPDLDAA 585

Query: 289 YG------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG- 341
           +       GA  N +D+ GG       A  ++   D  +  +++  +  I+   ++    
Sbjct: 586 FREFIPPFGAAGNPVDITGGEPPSTYEATIRLGLEDPRIHALVLGYWHTIVTPPMVFAEL 645

Query: 342 ---ILSAVKEVKINIPLVMRLEG-ANVDIGNRLIAESGLNVITAID 383
              +++  +E  I+ P+V  L G   V+   + + E G+       
Sbjct: 646 TARVVAEFRERGISKPVVASLAGDVEVEEACQYLFERGVVAYPYTT 691


>gi|325680198|ref|ZP_08159763.1| phosphoribosylamine--glycine ligase [Ruminococcus albus 8]
 gi|324108147|gb|EGC02398.1| phosphoribosylamine--glycine ligase [Ruminococcus albus 8]
          Length = 452

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A   V S   +A + +K       V+K+   A G+             
Sbjct: 106 SKELMKKYNIPTAGYEVFSDSESAIAYVKQQNSYPTVIKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  +    +  I++++            G     V +E+  
Sbjct: 153 -GVILAQNEAEAVEAIKDMIDGKKF-------GESSATVVIEEFL 189


>gi|218780435|ref|YP_002431753.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218761819|gb|ACL04285.1| CoA-binding domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 695

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 74/223 (33%), Gaps = 20/223 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++  LL+   +P  K    +SV   E A+  +P P+ V+K               L    
Sbjct: 487 ESMELLQACRIPTPKSAAAASVDELEKALNGIPFPV-VMKVV---------SPDALHKSD 536

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV+V            E + S L +         V    + + A    +L++    D 
Sbjct: 537 VGGVQVGVQDVEQAKKAFESIKSNLKSHAPEARFDGVR---IAEMAPEGHDLFIGAKRD- 592

Query: 127 TSGMVAFIASTQG-GMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
                  +    G  M+I +     P    K  + + L G+    +              
Sbjct: 593 EVFGPVIVFGMGGIYMEIFKDLATIPCPARKSAVREALSGLKVYKLLQGAR--GQAPADV 650

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI 226
               DL   +        ++  L++NP+ + + G +  LD ++
Sbjct: 651 DAFVDLVRQISCLMAGFPEIQELDLNPVRVFQKG-VMPLDMRM 692


>gi|148926982|ref|ZP_01810658.1| carbamoyl-phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145844390|gb|EDK21499.1| carbamoyl-phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 1095

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 137 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 182 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 230

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 231 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 274



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 685 FAEFITKLGINQPKNFTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 729

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 730 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 778

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 779 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 832

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 833 LNIQF---------ALHNNELYMIEVNP 851


>gi|148653221|ref|YP_001280314.1| phosphoribosylamine--glycine ligase [Psychrobacter sp. PRwf-1]
 gi|148572305|gb|ABQ94364.1| phosphoribosylamine--glycine ligase [Psychrobacter sp. PRwf-1]
          Length = 425

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++ +N+P AK     +   A  A     G   VVK+   A G+             
Sbjct: 108 AKEFMQAHNIPTAK-YAAFTDIEAAKAYVIDNGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +++     I ++LG      + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAETIEQAHDAIEDMLG----DNKFGDAG---SRVVIEQFLQGEEASFICMI 201


>gi|281411669|ref|YP_003345748.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Thermotoga naphthophila RKU-10]
 gi|281372772|gb|ADA66334.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Thermotoga naphthophila RKU-10]
          Length = 380

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 55/157 (35%), Gaps = 23/157 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+K  +PV +   +  +    S ++    P+ V K++            +   D + 
Sbjct: 105 KEFLKKNGIPVPRYKPVKDLE---SDVREFGFPV-VQKARKGGYDGRGVFIIKNEKDLEN 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++ E+ L+  +   +E+     +       G        E     + E+Y     +  +
Sbjct: 161 AIKGETYLEEFVEIEKEL----AVMVARNEKG--------ETACYPVVEMYF---DEDAN 205

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
                IA       IEE      ++I   +++ L GV
Sbjct: 206 ICDTVIA----PARIEEKHSKIAREIATSVVEALEGV 238


>gi|253565447|ref|ZP_04842902.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_2_5]
 gi|251945726|gb|EES86133.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_2_5]
          Length = 388

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 33/165 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYYYAKSLEELKEAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+  + L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSAAELEHAWEY-----------GCNGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
                      G +   +   DY +      IDP     +ED+A 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPAHLKEAEDMAE 242


>gi|149174998|ref|ZP_01853622.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
           [Planctomyces maris DSM 8797]
 gi|148846335|gb|EDL60674.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
           [Planctomyces maris DSM 8797]
          Length = 1084

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 33/170 (19%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K  + K  +   +  V+ ++  A +A+K +  P+ +  S    G             +
Sbjct: 131 QFKEAMTKIGLDCPRSAVVHNMEEANAAVKDIGLPIIIRASYTLGG-------------T 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV    + +  +  +R  L  +            VN V +E+     +E  + ++ D 
Sbjct: 178 GGGV--AYNREEFVEKVRSGLALS-----------PVNEVLLEESILGWKEYEMEVMRD- 223

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +  V  I +      IE            + + P   +T ++   + D 
Sbjct: 224 QADNVVIICA------IENFDPMGVHTGDSITVAPAQTLTDKEYQRMRDA 267


>gi|332535506|ref|ZP_08411284.1| protein acetyltransferase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035083|gb|EGI71599.1| protein acetyltransferase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 889

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 29/232 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA  +L  Y +   +  V  +   A+     L  P+ +         +         ++
Sbjct: 492 HQASQVLNHYGIKCIQTEVAYTPTEAKEQAIELGFPVAL---------KLISPSIASKSE 542

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G V   +    V      +L     T       G  +    +   A    EL +++  
Sbjct: 543 VGGVVLNLNDANEVEQTAFAMLIRIKNTYPDAVIEGFSLQK--MAPRAG-ANELRIAIKT 599

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +   G V  +     G++  + A   P             +    +A+  D   L+ +  
Sbjct: 600 EPNFGPVILLGEAGTGLEYAQAAVALPPLNMN--------LAKYLIAAAHDKGVLKERIL 651

Query: 185 IDGGD------LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
            +  D      L   + +   D+ D+S +E+NP I+  NG+  VLD+ ++ +
Sbjct: 652 PEKVDKYRLCALLTRISQLVIDQPDISSMELNP-ILASNGQFLVLDATMTLN 702


>gi|238922175|ref|YP_002935689.1| carbamoyl-phosphate synthase [Eubacterium eligens ATCC 27750]
 gi|238873847|gb|ACR73555.1| carbamoyl-phosphate synthase [Eubacterium eligens ATCC 27750]
          Length = 1072

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P AKG  + +V  A  A   L  P+ V  S +  G                G
Sbjct: 673 EILEQTQIPRAKGQTVFTVDEALKAANELGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISD---IREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  S + V+     I  I     I       G  +    V DG DI
Sbjct: 718 MQIAVSDEDVVEFMNIINRIKQDHPILVDKYLMGKEIEVDAVCDGQDI 765


>gi|254517394|ref|ZP_05129451.1| phosphoribosylamine--glycine ligase [gamma proteobacterium NOR5-3]
 gi|219674232|gb|EED30601.1| phosphoribosylamine--glycine ligase [gamma proteobacterium NOR5-3]
          Length = 431

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++N+P A     + V  A + ++    P+ VVK+   A G+             
Sbjct: 108 SKDFLARHNIPTAAYATFTDVEPALAYLREQGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      + ++L         G  G RV    +E+  D   E    ++ D  
Sbjct: 154 -GVIVAETLSQAEEAVTDML----SGNAFGDAGCRV---VIEEFLD-GEEASFIVISDGE 204

Query: 128 SGMVAFIASTQGGMDIEE 145
           + +   +AS+Q    I E
Sbjct: 205 TVLP--MASSQDHKRIGE 220


>gi|281183276|ref|NP_001162513.1| trifunctional purine biosynthetic protein adenosine-3 [Papio
           anubis]
 gi|159487306|gb|ABW97196.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform 1
           (predicted) [Papio anubis]
          Length = 1010

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|261337962|ref|ZP_05965846.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           gallicum DSM 20093]
 gi|270277457|gb|EFA23311.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium
           gallicum DSM 20093]
          Length = 1122

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LRK ++   +     S+  A  A  ++  P+ V  S +  G                G
Sbjct: 682 EVLRKEHMNAPRFGTALSLEEALDAAHSIGYPVLVRPSYVLGG---------------RG 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +   L   +    T  +G   + + ++       E+ +  L D    
Sbjct: 727 MEIVYDDAQLEKYVNRALNEAMA--DTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   IEE           L   P   ++ + +  L +    +  A   G
Sbjct: 785 YI-------GGIMEHIEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTRAIAEGCG 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VRGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ +     A+  +  ++   ++  +    PL V         R       L +    
Sbjct: 133 KKVVEEAGAESARSEIAHTLEEVDAIAEEFGFPLVV---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +    + +                 G   S  + V +E+G +  +E  L L+ DR  
Sbjct: 181 ---IAHDTEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEYELELMRDRND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
                +      +D   V       I    + P   +T  +   L D+
Sbjct: 227 N--VVVVCPIENVDP--VGVHTGDSI---TVAPAFTLTDREYQKLRDI 267


>gi|109947274|ref|YP_664502.1| carbamoyl phosphate synthase large subunit [Helicobacter
           acinonychis str. Sheeba]
 gi|109714495|emb|CAJ99503.1| carbamoyl-phosphate synthase large chain [Helicobacter acinonychis
           str. Sheeba]
          Length = 1133

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAMIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R       I      +D   +       I    I P + +T ++   + D 
Sbjct: 220 RDGKDNCIIVCCIENIDP--MGIHTGDSI---TIAPSLTLTDKEYQRMRDA 265


>gi|126140054|ref|XP_001386549.1| Multifunctional pyrimidine synthesis protein CAD (includes
           carbamoyl-phophate synthetase, aspartate
           transcarbamylase, and glutamine amidotransferase)
           [Scheffersomyces stipitis CBS 6054]
 gi|126093833|gb|ABN68520.1| Multifunctional pyrimidine synthesis protein CAD (includes
           carbamoyl-phophate synthetase, aspartate
           transcarbamylase, and glutamine amidotransferase)
           [Scheffersomyces stipitis CBS 6054]
          Length = 1148

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 69/221 (31%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ + + +V  A  A K++  P+ V         R       L +       
Sbjct: 191 LKEINIPIAESIAVETVDDALDAAKSVGYPIIV---------RSAYSLGGLGSG------ 235

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++   + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 236 FAANETELRNLAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 282

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 283 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECN 335

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L Y+   + +  L   + L     G      +
Sbjct: 336 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 375


>gi|57237334|ref|YP_178347.1| carbamoyl phosphate synthase large subunit [Campylobacter jejuni
           RM1221]
 gi|57166138|gb|AAW34917.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           RM1221]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   I+E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRFYIQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|315057703|gb|ADT72032.1| Carbamoyl-phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   I+E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYIQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|313892347|ref|ZP_07825939.1| phosphoribosylamine--glycine ligase [Dialister microaerophilus UPII
           345-E]
 gi|313119206|gb|EFR42406.1| phosphoribosylamine--glycine ligase [Dialister microaerophilus UPII
           345-E]
          Length = 415

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 22/120 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + KYN+P AK   ++S    E  IK    P  V+K+     G+             
Sbjct: 104 AKEFMLKYNIPTAKYETVTSKSEGEKVIKHFAYP-LVIKADGLCAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV++  +       ++E+    +        G       +E+  +      L  + D  
Sbjct: 150 -GVKICQNELEAKEYLKELFEEKIF-------GKEGTTAVIEEFLEGKEASLLCFVSDGN 201


>gi|312144570|ref|YP_003996016.1| phosphoribosylamine/glycine ligase [Halanaerobium sp.
           'sapolanicus']
 gi|311905221|gb|ADQ15662.1| phosphoribosylamine/glycine ligase [Halanaerobium sp.
           'sapolanicus']
          Length = 424

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P A+    S    A   IK    P+ VVK++  A G+             
Sbjct: 106 AKNLMQKYNIPTAEYKSFSDPKDARKYIKEKGVPI-VVKAEGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V   L+  ++ + +I    +I ++ G  G     + VE+  +      LS   D  
Sbjct: 152 -GVIVAQHLEEALNAVEKI----MIDEKFGQAG---EKIVVEEYLEGEEATILSF-CDGE 202

Query: 128 SGMVAF 133
           S +   
Sbjct: 203 SIVPMI 208


>gi|194367437|ref|YP_002030047.1| phosphoribosylamine--glycine ligase [Stenotrophomonas maltophilia
           R551-3]
 gi|194350241|gb|ACF53364.1| phosphoribosylamine/glycine ligase [Stenotrophomonas maltophilia
           R551-3]
          Length = 428

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++N+P      + +   A  A     G   VVK+   A G+             
Sbjct: 109 AKDFLARHNIPT-AFYAVHTEVDAALAYIREKGAPIVVKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++
Sbjct: 155 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMV 202


>gi|317153164|ref|YP_004121212.1| pyruvate carboxylase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943415|gb|ADU62466.1| Pyruvate carboxylase [Desulfovibrio aespoeensis Aspo-2]
          Length = 472

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 28/180 (15%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K L R   VP   G    I     AE+  ++L         Q + G +      +  A  
Sbjct: 125 KRLARSLGVPTVPGSDRAIYDEMEAEAIAESLFEF------QANMGIKRPVVLVKASAGG 178

Query: 67  KG-GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G G+ V   +       R I   +L T            V +E        L + ++ D
Sbjct: 179 GGMGIDVVEDMARFRQTYRRIRNYSLRTFSD-------EGVLIEQRVFNFNHLEVQIVSD 231

Query: 126 RTSGMV-------AFIASTQGGMDIEEVAKDYPQKIFKLL-----IDPLIGVTSEDVASL 173
           R+             + S      IE      P+ +         ID + G +      +
Sbjct: 232 RSGKNPVHFGTRNCSVQSPGLQKRIEIAPGFRPENLRYEFDAAKVIDDITGYSLSIAREI 291


>gi|302540542|ref|ZP_07292884.1| putative acyl-CoA synthetase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458160|gb|EFL21253.1| putative acyl-CoA synthetase [Streptomyces himastatinicus ATCC
           53653]
          Length = 693

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+Q K +L ++ VPV +G V +    A  A + +  P+ V         +       L
Sbjct: 478 LDEWQGKRILAEWGVPVPEGAVAT-AATAVEAARDIGFPVVVKAVSAAIAHKSDVGGVRL 536

Query: 63  PADSKGGVRVESS 75
               +  VR    
Sbjct: 537 GLTGEQQVRAAVD 549


>gi|165940727|gb|ABY75263.1| ATP citrate lyase beta subunit [uncultured epsilon proteobacterium]
          Length = 110

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETLIDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAV-----KEVKINIPLVMRLEGAN 363
           +  ++ I G I     + K   GI+ A      K  +I I + +R  G N
Sbjct: 61  REEILIIGGAIANFTDVAKTFTGIIQAFEIHAEKMKEIGIKIYVRRGGPN 110


>gi|169602485|ref|XP_001794664.1| hypothetical protein SNOG_04245 [Phaeosphaeria nodorum SN15]
 gi|160706181|gb|EAT88005.2| hypothetical protein SNOG_04245 [Phaeosphaeria nodorum SN15]
          Length = 1125

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 67/233 (28%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     ++P+AK + +SS+  A  A + +  P+ V  +    G            
Sbjct: 214 RDLFARALDEIDIPIAKSIAVSSIDEALDAAEKVGYPIIVRAAYALGGL----------- 262

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++   +       L  +               + VE      +E    ++ 
Sbjct: 263 ----GSGFANNADELRDLSARSLTLS-------------PQILVEKSLKGWKEAEYEVVR 305

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D +   +          ++E            +++ P    + E+          +   L
Sbjct: 306 DASDNCITV-------CNMENFDPLGVHTGDSIVVSPSQTFSDEEYHMLRSAAIKIVRHL 358

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 359 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 410


>gi|88859157|ref|ZP_01133798.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein
           [Pseudoalteromonas tunicata D2]
 gi|88819383|gb|EAR29197.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein
           [Pseudoalteromonas tunicata D2]
          Length = 889

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 79/227 (34%), Gaps = 21/227 (9%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           YQ + +L  Y + V +  V  +   A    + L  P+ +         +         +D
Sbjct: 492 YQTRPILDFYGIDVIQTEVALTPSEAREQAQALGFPIAL---------KLLSPSIPSKSD 542

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLL 123
             G V   +    V      IL   L  KQT P  + +    ++  A     +EL +++ 
Sbjct: 543 VGGVVLNLNDGDEVEQTAFSIL---LRIKQTYPD-AIIEGFSIQKMAPRAGAQELRIAIK 598

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D   G V  +  +  G+   + A   P     L       + +           L  + 
Sbjct: 599 TDPCFGPVILLGESGTGLSFAQAAVALPPLNMNLA---KYLIAAAHDKGYIKDKHLPDKI 655

Query: 184 RI-DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  L   + +   D+ ++  LE+NP ++  +G+  VLD+ +  
Sbjct: 656 DKYTLCALLTRVSQLIVDQPNIESLELNP-VLAIDGQFLVLDAMMQV 701


>gi|329960550|ref|ZP_08298917.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fluxus
           YIT 12057]
 gi|328532614|gb|EGF59404.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fluxus
           YIT 12057]
          Length = 388

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 33/165 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  A+     S+   ++A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTARYFYAKSLDELKAAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
                      G +   +   DY +      IDP   V ++D+A 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPAHLVEAQDMAE 242


>gi|257094019|ref|YP_003167660.1| GCN5-like N-acetyltransferase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046543|gb|ACV35731.1| GCN5-related N-acetyltransferase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 887

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 37/232 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL---YVVK-----SQIHAGGRGKGR 58
           QA+ +LR Y + VA   + SSV AA    + +  P+    V+       Q+ AG R    
Sbjct: 490 QARRVLRAYGIAVADHSLASSVEAAIGTAERIGYPVDIGLVLANTAECEQVAAGLRSPAE 549

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            +      +   R++   K V +             +  P+G+R        G   LR  
Sbjct: 550 IQLAVRGLRNSARLQQPRKRVTAY------------RLRPSGAR-------SGTPALR-- 588

Query: 119 YLSLLVDRTSGMVAFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            L +  D   G + F+    G G          P     L  D    + +    +     
Sbjct: 589 -LGVAEDSLFGPLIFLGPAAGAGARRSRFVVALPPLNLTLAQD----LVARSGFAAEAPE 643

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDSKISF 228
             +             L +   D D  +  E++PL +  +G +  LD ++  
Sbjct: 644 GERAALEAAVSQTLVRLSQLLTDIDAVVGAELDPLFVETSG-VVALDVRLRI 694


>gi|256376784|ref|YP_003100444.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Actinosynnema mirum DSM 43827]
 gi|255921087|gb|ACU36598.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Actinosynnema mirum DSM 43827]
          Length = 413

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 11/118 (9%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
             P+     + S+  A+ A +    P+ V        G G     +   +++       +
Sbjct: 118 GAPIPGFRHVESLEEAKEAAREFGFPVIV----KPTLGAGSHFVFKCDDEAELAEHYAQA 173

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCV-----YVEDGADILRELYLSLLVDRTS 128
            + +         S       GP    V        Y+ +      E+YL  +VDR +
Sbjct: 174 AEGIRDLF--WANSEADGIDLGPNALLVESFLDGKEYLMEAVAWDGEVYLGSVVDRIT 229


>gi|157835953|pdb|2QK4|A Chain A, Human Glycinamide Ribonucleotide Synthetase
 gi|157835954|pdb|2QK4|B Chain B, Human Glycinamide Ribonucleotide Synthetase
          Length = 452

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 132 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 178

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 179 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 216


>gi|302866068|ref|YP_003834705.1| CoA-binding domain-containing protein [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568927|gb|ADL45129.1| CoA-binding domain protein [Micromonospora aurantiaca ATCC 27029]
          Length = 851

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 6/106 (5%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A ALLR Y + V + V   S     +A + L  P+ +  +      R       L    
Sbjct: 638 DAAALLRAYGIDVVESVPAGSADEVLAAAERLGRPVALKAAAPGLRHRLDLGAVRLDLTD 697

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
              +R         +++  + G+ ++ +     G       VED A
Sbjct: 698 AAALRR------AYAEMAPVFGAEVLVQPMVAPGVACVVELVEDPA 737


>gi|268679237|ref|YP_003303668.1| phosphoribosylamine/glycine ligase [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617268|gb|ACZ11633.1| phosphoribosylamine/glycine ligase [Sulfurospirillum deleyianum DSM
           6946]
          Length = 424

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L  Y +P AK +     + A + I+TL  P+ VVK+     G+              
Sbjct: 105 KNFLSSYGIPTAKYIETHDANKANAFIETLALPI-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  S +     + ++L      K  G  G     V VE+  D   EL L ++ D   
Sbjct: 150 GVIIAQSKEEAKEAVADML----SGKSFGDAGH---GVVVEEFLD-GYELSLFVVCDGID 201

Query: 129 GMVA 132
             + 
Sbjct: 202 YKIL 205


>gi|225848352|ref|YP_002728515.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644559|gb|ACN99609.1| acetyl-CoA carboxylase, biotin carboxylase subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 472

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           +K +++K+ VP   G   V+ SV  A +  K +  P+ +  S
Sbjct: 118 SKEIMKKFGVPTVPGSDGVLKSVEEAVALAKEIGYPVLLKAS 159


>gi|298490446|ref|YP_003720623.1| cyanophycin synthetase ['Nostoc azollae' 0708]
 gi|298232364|gb|ADI63500.1| cyanophycin synthetase ['Nostoc azollae' 0708]
          Length = 900

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L    VPV +G VI+ +   E +I+ + G   V+K      GRG
Sbjct: 224 KRILAANGVPVPRGTVINFLDDLEESIEYVGGYPIVIKPLDGNHGRG 270


>gi|195051433|ref|XP_001993094.1| GH13636 [Drosophila grimshawi]
 gi|193900153|gb|EDV99019.1| GH13636 [Drosophila grimshawi]
          Length = 1352

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    + V  A+  I++ P P  VVK+   A G+             
Sbjct: 114 AKDFMLRHGIPTARYESFTDVAKAKKFIRSAPYPALVVKAAGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V +++      + EILG  
Sbjct: 161 -GVVVAANVDEACQAVDEILGQL 182


>gi|86151232|ref|ZP_01069447.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|85841579|gb|EAQ58826.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 260.94]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|300121361|emb|CBK21741.2| Acetyl CoA synthetase subunit ? [Blastocystis hominis]
          Length = 737

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 79/235 (33%), Gaps = 23/235 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +   +L    +      ++++ + A           ++ K++  A  +   +    
Sbjct: 520 LTEIEGYDILSACGIRTPDYKLVTAGNDAAD---------FLSKAKTDAKDKFVAKIVSP 570

Query: 63  PADSK---GGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
               K   GGV++  ++ +   + + E+             G   + V +        E+
Sbjct: 571 DIIHKSDVGGVKLGLTTPEEACAVVNELNAK------FSKQGIDYHGVMLYKMVPFGTEM 624

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML- 177
            +    +R +       S  GG+ +E +           + +  + + +     + +   
Sbjct: 625 MIG--ANRDATFGPITVSGLGGVLVEVLKDVVFNMCPVSVEEAQMSLDNLKTQKMLNGFR 682

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFDDN 231
                 R    +    + +     + +  ++INPLI + +G L  +DS  +   N
Sbjct: 683 GQPALNRAKFAEYIAIVSEIMTQCEQIKEIDINPLIQLHDGSLTAVDSVFTLKKN 737


>gi|262282329|ref|ZP_06060097.1| carbamoyl-phosphate synthase large subunit [Streptococcus sp.
           2_1_36FAA]
 gi|262261620|gb|EEY80318.1| carbamoyl-phosphate synthase large subunit [Streptococcus sp.
           2_1_36FAA]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 32/92 (34%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G  G     E       
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFADGIGYPVIVRPAFTLGGTGGGICSNEEELQEIA 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  ++ S  +     R I G   I  +    G
Sbjct: 193 GNGLKLSPVTQCLIERSIAGFKEIEYEVMRDG 224


>gi|169831463|ref|YP_001717445.1| carbamoyl-phosphate synthase, large subunit [Candidatus
           Desulforudis audaxviator MP104C]
 gi|226700927|sp|B1I4M8|CARB_DESAP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|169638307|gb|ACA59813.1| carbamoyl-phosphate synthase, large subunit [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 1082

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 41/201 (20%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +   PV +  +IS V AA +  + +  P+ V  +    G             + GGV   
Sbjct: 138 EIGEPVPESSIISDVDAAVAFARKIGYPVVVRPAYTLGG-------------TGGGV--A 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   +       L  ++           ++ V VE      +E+   ++  R +     
Sbjct: 183 FSEDELREIAVRGLTMSI-----------IHQVLVEKCVLGWKEIEYEVM--RDAAGNCI 229

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQARIDGGD 189
              +   +D   +       I       L     + +      +   L ++G   +    
Sbjct: 230 TICSMENIDP--MGIHTGDSIVVAPTQTLSDREHQMLRSASLKIIRALGVEGGCNVQFAL 287

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              +        D  ++E+NP
Sbjct: 288 DPES-------YDYYVIEVNP 301



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 29/82 (35%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L+ +  +P   G    SV  A+   + +  P+ V  S +  G   +  +          
Sbjct: 687 QLVAELGIPRPPGGTGFSVEEAQRIAEQVGFPVLVRPSYVLGGRAMEIVYNSQELLEYMA 746

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V  + K  +   + +LG  L
Sbjct: 747 DAVRVTPKHPVLVDKYLLGKEL 768


>gi|118595293|ref|ZP_01552640.1| phosphoribosylamine--glycine ligase [Methylophilales bacterium
           HTCC2181]
 gi|118441071|gb|EAV47698.1| phosphoribosylamine--glycine ligase [Methylophilales bacterium
           HTCC2181]
          Length = 430

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 73/205 (35%), Gaps = 45/205 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + K+ +P A+    S +  A   ++ L G   V+K+   A G+             
Sbjct: 107 AKKFMVKHGIPTAEHQTFSDIQLAHDYVE-LKGAPIVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +LK     I  +L   +     G  G+    V +E+  D     ++++  D  
Sbjct: 153 -GVVVALTLKEAHDAIDSMLSKNIF----GDAGA---QVVIEEFLDGEEVSFIAI-CDGE 203

Query: 128 SGMVAFIASTQGGMDIEE------------------VAKDYPQKIFKLLIDPLIGVTSED 169
           + +   +AS+Q    +++                  V  +  +KI K +I P I    +D
Sbjct: 204 TVLP--LASSQDHKRLQDDDLGPNTGGMGAYSPAPIVTDEMHEKIMKQVITPTIEGMKKD 261

Query: 170 VASLCDMLELQGQARIDGGDLFPNL 194
              +     L     I+       L
Sbjct: 262 G--VIFKGFLYAGLMINADKQIKTL 284


>gi|86360172|ref|YP_472061.1| acyl-CoA synthetase protein [Rhizobium etli CFN 42]
 gi|86284274|gb|ABC93334.1| probable acyl-CoA synthetase protein [Rhizobium etli CFN 42]
          Length = 684

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 16/108 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AK  L    +PV  G+   S   A    + L  P+ +           KG     
Sbjct: 479 LTEADAKTELAACGLPVPWGLQAFSPREAAEQAERLGFPVVL-----------KGLGIAH 527

Query: 63  PADSKGGVRVESSLKSVISDIREI--LGSTLITKQTGPTGSRVNCVYV 108
             ++   V      ++V +    +   G  LI K   P    V  + V
Sbjct: 528 KTEAGAVVLNLRDPEAVSNAAAAMPANGGYLIEKMIDP---PVAELIV 572


>gi|307747219|gb|ADN90489.1| Carbamoyl-phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni M1]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|283955701|ref|ZP_06373192.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283792656|gb|EFC31434.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268


>gi|167043785|gb|ABZ08476.1| putative phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           protein [uncultured marine microorganism
           HF4000_APKG3D20]
          Length = 463

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + +     P+ VVK+   A G+              
Sbjct: 147 KDFLARHGIPTASYGTFTEVEDALAFLAESAFPM-VVKASGLAAGK-------------- 191

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  + +   +  RE+L         G +G  V    +E+  D
Sbjct: 192 GVIICQTPEEAENAAREML----SGASFGESGKEV---VIEEFLD 229


>gi|71909280|ref|YP_286867.1| phosphoribosylamine--glycine ligase [Dechloromonas aromatica RCB]
 gi|71848901|gb|AAZ48397.1| phosphoribosylamine--glycine ligase [Dechloromonas aromatica RCB]
          Length = 425

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++N+P A     ++   A + I     P+ V+K+   A G+             
Sbjct: 106 AKRFMARHNIPTAGFGTFTNAAEAHAYIDQQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+   + I ++L       + G  G+RV    +E+  D   E    ++VD  
Sbjct: 152 -GVVVAMSLEEAHAAIDDML----SGNKLGDAGARV---VIEEFLD-GEEASFIVMVDGK 202

Query: 128 SGMVAFIASTQGGMDI 143
           +  V  +AS+Q    I
Sbjct: 203 N--VLALASSQDHKRI 216


>gi|85705434|ref|ZP_01036532.1| acetyl-CoA synthetase, putative [Roseovarius sp. 217]
 gi|85669859|gb|EAQ24722.1| acetyl-CoA synthetase, putative [Roseovarius sp. 217]
          Length = 721

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 29/231 (12%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E +A AL+  Y +   + V + ++ A  +A+  +  P  V+K        G     +
Sbjct: 508 DLSEAEALALIADYGIATPRVVEVDTLEALRNAVPEVGLP-LVLK----TAAPGIKHKSD 562

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           +     G   +  S++    +I   LG   I ++  P+G                EL   
Sbjct: 563 VAGVFLGLTDMA-SIELAYREIAVRLGPQAILEEMLPSGI---------------ELAFG 606

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE--DVASLCDMLEL 179
           L+ D T G    +A+  GG+ IE + +D    +         G+  E      L     +
Sbjct: 607 LVQDETFGPFVIMAA--GGIWIEAL-EDRVVALPPFDQAEARGMIDELRIRRQLGGGRGV 663

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
                      F    +   D    + E  +NPL    +G +R +D+ +S 
Sbjct: 664 PPADLDAIAQAFSRFSQLAADLGDLIFEMDVNPLFARADG-IRAVDALLSV 713


>gi|325854373|ref|ZP_08171572.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella denticola
           CRIS 18C-A]
 gi|325484167|gb|EGC87101.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella denticola
           CRIS 18C-A]
          Length = 393

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 49/185 (26%), Gaps = 34/185 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     +    + A   +  P  VVK  + + G G+                  +
Sbjct: 115 GLRTAKYFYAKTYEEFKEAADEIGFPC-VVKPLMSSSGHGQSY--------------VHN 159

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
              +                 G  G  V  V +E+  D   E  L  L            
Sbjct: 160 DDELQEA--------FKNAMEGARGD-VKEVIIEEFIDFDSEFTL--LTVTQKNGPTLFC 208

Query: 134 --IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC--DMLELQGQARIDGGD 189
             I   Q G D  E  +  P  I    +     +  E   +L    +  ++      G  
Sbjct: 209 PPIGHVQKGGDYRESWQ--PYTISDEALQQAEHMADEVTRALTGYGIWGVEFFLTKSGEV 266

Query: 190 LFPNL 194
           +F  L
Sbjct: 267 IFSEL 271


>gi|315932562|gb|EFV11494.1| carbamoyl-phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268


>gi|307721700|ref|YP_003892840.1| phosphoribosylamine--glycine ligase [Sulfurimonas autotrophica DSM
           16294]
 gi|306979793|gb|ADN09828.1| phosphoribosylamine--glycine ligase [Sulfurimonas autotrophica DSM
           16294]
          Length = 421

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KYN+P A+ +   S+        +L  P+ VVK+    GG+              
Sbjct: 105 KNFLAKYNIPTARYIESDSIEDLFQFTNSLQTPI-VVKADGLCGGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S       I E+L      K  G  G     V VE+  D
Sbjct: 150 GVIIAQSHDEAKKAISEML----SGKSFGDAGK---KVIVEEFLD 187


>gi|255020831|ref|ZP_05292887.1| Carbamoyl-phosphate synthase large chain [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969622|gb|EET27128.1| Carbamoyl-phosphate synthase large chain [Acidithiobacillus caldus
           ATCC 51756]
          Length = 1076

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 48/161 (29%), Gaps = 33/161 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + VA+     ++  A +  + +  P+ +  S    G             S G
Sbjct: 133 KRAMEEIGLEVARSAFAHTLDEARAIAEDVGFPVIIRPSYTLGG-------------SGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + +                   G   S  + + +E+     +E  + ++ DR  
Sbjct: 180 GI--AYNREEFEDIAAR-----------GLEASPSHEILIEESVIGWKEFEMEVVRDRAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
             +           IE +          + + P   +T  +
Sbjct: 227 NCIIV-------CSIENLDPMGIHTGDSITVAPAQTLTDRE 260


>gi|269925437|ref|YP_003322060.1| lysine biosynthesis enzyme LysX [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789097|gb|ACZ41238.1| lysine biosynthesis enzyme LysX [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 282

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP  + ++  +  +A  AI+++  P+ V+K  I + GR       L  D      
Sbjct: 94  LARCGVPTPRTLIAFTPESALKAIESIGYPV-VLKPLIGSWGR----LISLVNDRYAA-- 146

Query: 72  VESSLKSVISDIREILGS 89
                   + + +EILGS
Sbjct: 147 ------EALLEHKEILGS 158


>gi|170288289|ref|YP_001738527.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Thermotoga sp. RQ2]
 gi|170175792|gb|ACB08844.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Thermotoga sp. RQ2]
          Length = 380

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 55/157 (35%), Gaps = 23/157 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+K  +PV +   +  +    S ++    P+ V K++            +   D + 
Sbjct: 105 KEFLKKNGIPVPRYKPVKDLE---SDVREFGFPV-VQKARKGGYDGRGVFIIKNEKDLEN 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++ E+ L+  +   +E+     +       G        E     + E+Y     +  +
Sbjct: 161 AIKGETYLEEFVEIEKEL----AVMVARNEKG--------ETACYPVVEMYF---DEDAN 205

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
                IA       IEE      ++I   +++ L GV
Sbjct: 206 ICDTVIA----PARIEEKHSKIAREIATSVVEALEGV 238


>gi|125718157|ref|YP_001035290.1| carbamoyl phosphate synthase large subunit [Streptococcus sanguinis
           SK36]
 gi|167006451|sp|A3CNI5|CARB_STRSV RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|125498074|gb|ABN44740.1| Carbamoyl-phosphate synthase large chain, putative [Streptococcus
           sanguinis SK36]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|328946394|gb|EGG40535.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK1087]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAADIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|330448333|ref|ZP_08311981.1| acetyltransferase family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492524|dbj|GAA06478.1| acetyltransferase family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 912

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 87/245 (35%), Gaps = 32/245 (13%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A+ +L  Y        +      A    + +  P+ V         + +       ++
Sbjct: 502 HEARPILECYGFTTLPTWIALDAAEAVHIAEQIGYPVAV---------KLRSPDIRHKSE 552

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLL 123
             G V    +   V + ++ I     +   T     R++ + V+  AD    +EL + + 
Sbjct: 553 IHGVVLHLRTANEVENAVQAIFDRVAMHYPTA----RIDGLLVQRMADRSGAQELRIDVH 608

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQ 182
            D   G V  +       DI   A         + I PL + +    V +     +++ +
Sbjct: 609 NDPIFGPVILMGEDNARWDIHRDAA--------VAIPPLNMALARYMVINALKTGKIKQR 660

Query: 183 ARIDGGDL------FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           + ++  D+         + +   D  ++  L I+PL++  +  L VLD+ +  +     +
Sbjct: 661 SALEKIDIPALCGLLVKISQLIIDCPEIKALNIHPLLVSGS-DLTVLDASMDIEPFTGDK 719

Query: 236 HLDIQ 240
              + 
Sbjct: 720 QKRLA 724


>gi|323351423|ref|ZP_08087079.1| exopolyphosphatase [Streptococcus sanguinis VMC66]
 gi|322122647|gb|EFX94358.1| exopolyphosphatase [Streptococcus sanguinis VMC66]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|301768413|ref|XP_002919622.1| PREDICTED: trifunctional purine biosynthetic protein
           adenosine-3-like [Ailuropoda melanoleuca]
 gi|281345148|gb|EFB20732.1| hypothetical protein PANDA_008270 [Ailuropoda melanoleuca]
          Length = 1010

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTARWRAFTKPEEACSFIMSSDFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     ++EI    +  K  G  G     + +E+  +      L     R
Sbjct: 157 -GVIVAKSTEEACRAVQEI----MQDKAYGAAG---ETIVIEELLEGEEVSCLCFTDGR 207


>gi|255722473|ref|XP_002546171.1| carbamoyl-phosphate synthase arginine-specific large chain [Candida
           tropicalis MYA-3404]
 gi|240136660|gb|EER36213.1| carbamoyl-phosphate synthase arginine-specific large chain [Candida
           tropicalis MYA-3404]
          Length = 1146

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 67/220 (30%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++P+A+ + + SV  A  A + +  P+ V         R       L +       
Sbjct: 189 LKEIDIPIAESIAVESVDDALEAARNVGYPIIV---------RSAYSLGGLGSG------ 233

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + + +   + L             S    + VE      +E+   ++ DR    +
Sbjct: 234 FAANEEELRNLAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 280

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 281 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECN 333

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 334 VQYALQPDGLDFRVIEVNARLSRSSALASKATGYPLAYTA 373


>gi|239979324|ref|ZP_04701848.1| phosphoribosylglycinamide synthetase [Streptomyces albus J1074]
 gi|291451199|ref|ZP_06590589.1| phosphoribosylglycinamide synthetase [Streptomyces albus J1074]
 gi|291354148|gb|EFE81050.1| phosphoribosylglycinamide synthetase [Streptomyces albus J1074]
          Length = 411

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA- 64
           Y  + LL +  +P  +  +  +   AE     L  P+ VVK +  AG  G  R +E  A 
Sbjct: 108 YLTRRLLDEAGLPAVRHGLAHTAREAEEIAARLGFPV-VVKPRALAGSVGVVRVEEPAAV 166

Query: 65  ----DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
               +  GG    +        + E L    I+  +      V+CV V   
Sbjct: 167 AAAFELAGGAGYATLPNGHGILVEEFLDGPEISVDSAVLDGEVSCVQVAAK 217


>gi|119512793|ref|ZP_01631862.1| Cyanophycin synthetase [Nodularia spumigena CCY9414]
 gi|119462565|gb|EAW43533.1| Cyanophycin synthetase [Nodularia spumigena CCY9414]
          Length = 876

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L     PV +G VI+ +   E AI+ + G   V+K      GRG
Sbjct: 200 KRILAAAGAPVPRGTVINFLDDLEEAIEYVGGYPIVIKPSDGNHGRG 246


>gi|332361057|gb|EGJ38861.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK1056]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|302537390|ref|ZP_07289732.1| acyl-CoA synthetase [Streptomyces sp. C]
 gi|302446285|gb|EFL18101.1| acyl-CoA synthetase [Streptomyces sp. C]
          Length = 928

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 2/98 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  A+ LL +Y + V   +   S  AA  A + L  P+ +  +  H   R +     +
Sbjct: 704 LDEADARGLLARYGIRVLPTLPAPSPDAAVRAARVLGYPVALKTTAPHL--RHRADLGGV 761

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
             D  G   +  S + +   + +      + +   P G
Sbjct: 762 RLDLTGEPELRRSYEELTEVLGKPAELQPVVQSMAPRG 799


>gi|149001867|ref|ZP_01826840.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP14-BS69]
 gi|147760325|gb|EDK67314.1| phosphoribosylamine--glycine ligase [Streptococcus pneumoniae
           SP14-BS69]
          Length = 420

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY V  A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +++  +    E+L    +  + G +G+RV
Sbjct: 153 -GVVVSETVEQAVEAAHEML----LDNKFGDSGARV 183


>gi|72161461|ref|YP_289118.1| carbamoyl-phosphate synthase large subunit [Thermobifida fusca YX]
 gi|71915193|gb|AAZ55095.1| carbamoyl-phosphate synthase large subunit [Thermobifida fusca YX]
          Length = 1103

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L K  +P  K     S   A +  + +  P+ V  S +  GGRG
Sbjct: 677 RVLAKAGLPAPKHGTAQSFDEARAIAEEIGYPVLVRPSYVL-GGRG 721


>gi|27376086|ref|NP_767615.1| acetyl-CoA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27349225|dbj|BAC46240.1| bll0975 [Bradyrhizobium japonicum USDA 110]
          Length = 739

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 80/239 (33%), Gaps = 35/239 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +K LL+ Y +P +K     +   A    K +  P+   VV ++I              +D
Sbjct: 521 SKKLLKAYGIPTSKEATAQTAAEAVKIAKQIGFPVVAKVVSAEIL-----------HKSD 569

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR-VNCVYVEDGADILRELYLSLLV 124
             G V   S+   V     +I       +     G   ++ + +        EL +   +
Sbjct: 570 IGGVVLNLSNAAEVKKAFADI-----TARVKRLKGKPRLDGILIAQQVKADLELVVGASL 624

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-----LIGVTSEDVASLCDMLEL 179
           D   G V    +  GG+DIE +       +    +D      LIG T      +      
Sbjct: 625 DAEMGPVVLFGT--GGIDIELMKDV---ALAGAPLDEAEARLLIGRTKA-GIKMRGYRGK 678

Query: 180 QGQARIDGGDLFPNLYKAFCDKD--MSLLEINP-LIIMKNGRLRVLDSKISFDDNALYR 235
                         L     D    ++ ++INP LI  + G    +D+ I  ++ A  R
Sbjct: 679 PALHEASAVKALVGLSNLIADAGDRIASIDINPFLINTRTG--VAVDALIVLNNAAAKR 735


>gi|20094507|ref|NP_614354.1| phosphoribosylamine-glycine ligase [Methanopyrus kandleri AV19]
 gi|25453237|sp|Q8TWG3|PUR2_METKA RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|19887616|gb|AAM02284.1| Phosphoribosylamine-glycine ligase [Methanopyrus kandleri AV19]
          Length = 449

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPV-AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+ KY++P   +  +      A   I  L  P+ V K     GG+G     +     
Sbjct: 111 ARELMEKYDIPGRPEFGIFEDPDEACDFIDELGKPVAV-KPAGLTGGKGVKVVGDQLK-- 167

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                   +L      ++EI    +           +  V +E+   +  E  +    D 
Sbjct: 168 --------NLDEAKEYVKEIFEEDIGG---------IPKVIIEEKC-VGEEYTIQAYTDG 209

Query: 127 TSGMVA 132
              +  
Sbjct: 210 EKVIPT 215


>gi|46204261|ref|ZP_00050258.2| COG1042: Acyl-CoA synthetase (NDP forming) [Magnetospirillum
           magnetotacticum MS-1]
          Length = 286

 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y V V     + +   A  A + +  P+ V+KS   AG R +     +  D    
Sbjct: 67  ELLACYGVRVWPARRVRTADEAVEAAREVGWPV-VLKS-TAAGLRHRADLGGVRLDIADE 124

Query: 70  VRVESSLKSVISDIREIL 87
           + + +    +   +  +L
Sbjct: 125 IELRTDFAQMREALAAVL 142


>gi|332366727|gb|EGJ44468.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK1059]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|291619374|ref|YP_003522116.1| ArgH2 [Pantoea ananatis LMG 20103]
 gi|291154404|gb|ADD78988.1| ArgH2 [Pantoea ananatis LMG 20103]
          Length = 418

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K LL K  +PV +    S++      I+ +  P+ V+K +  AG  G
Sbjct: 117 KQLLEKAGLPVPRFAAFSTLEELRHHIRDIGLPV-VIKPREMAGSLG 162


>gi|255530040|ref|YP_003090412.1| carbamoyl phosphate synthase large subunit [Pedobacter heparinus
           DSM 2366]
 gi|255343024|gb|ACU02350.1| carbamoyl-phosphate synthase, large subunit [Pedobacter heparinus
           DSM 2366]
          Length = 938

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 26/108 (24%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ ++P  K  V  +   A      +  P+ V  S +  G                G
Sbjct: 677 DLLKELDIPYPKYGVAENAEEAIVVANEVGYPVLVRPSYVLGG---------------QG 721

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           + +  + + +   + ++LG               N V ++   D   E
Sbjct: 722 MSIVINDEDLEKAVVKLLG-----------DLPGNRVLIDHFLDRAEE 758


>gi|261367606|ref|ZP_05980489.1| carbamoyl-phosphate synthase, large subunit [Subdoligranulum
           variabile DSM 15176]
 gi|282570394|gb|EFB75929.1| carbamoyl-phosphate synthase, large subunit [Subdoligranulum
           variabile DSM 15176]
          Length = 1078

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P  +G  + ++  A  A + +  P+ +  S +  G
Sbjct: 672 ELLERCGIPRPEGRTVYTLDEALKAAQEVGYPVLMRPSYVLGG 714


>gi|254522809|ref|ZP_05134864.1| phosphoribosylamine--glycine ligase [Stenotrophomonas sp. SKA14]
 gi|219720400|gb|EED38925.1| phosphoribosylamine--glycine ligase [Stenotrophomonas sp. SKA14]
          Length = 427

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++N+P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHNIPT-AFYAVHTEVDAALAYIREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMV 201


>gi|332359676|gb|EGJ37493.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK355]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|327395697|dbj|BAK13119.1| argininosuccinate lyase 2 ArgH2 [Pantoea ananatis AJ13355]
          Length = 418

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K LL K  +PV +    S++      I+ +  P+ V+K +  AG  G
Sbjct: 117 KQLLEKAGLPVPRFAAFSTLEELRHHIRDIGLPV-VIKPREMAGSLG 162


>gi|309792119|ref|ZP_07686591.1| phosphoribosylamine/glycine ligase [Oscillochloris trichoides DG6]
 gi|308225660|gb|EFO79416.1| phosphoribosylamine/glycine ligase [Oscillochloris trichoides DG6]
          Length = 415

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP A   V ++  AA   ++T  G  +VVK    A G+G      +     
Sbjct: 106 AKEIMAEAGVPTAATHVFTTPSAAAEFVRT-SGSAWVVKVDGLAQGKGVVVPDTVEETLA 164

Query: 68  GGVRVESSLKSVISDIREIL 87
              ++   L      + E L
Sbjct: 165 AIEQLNHDLPEQALLLEERL 184


>gi|306833760|ref|ZP_07466886.1| carbamoyl-phosphate synthase, large subunit [Streptococcus bovis
           ATCC 700338]
 gi|304424097|gb|EFM27237.1| carbamoyl-phosphate synthase, large subunit [Streptococcus bovis
           ATCC 700338]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A +  +++  P+ V  +    G                
Sbjct: 133 KQLMEDLNQPIPESEIVNTVDEAVAFAESIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  +  + + +       L  + +T+ 
Sbjct: 178 GGGMCDNEEELREIAENGLKLSPVTQC 204


>gi|304315132|ref|YP_003850279.1| carbamoyl-phosphate synthase, large subunit [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588591|gb|ADL58966.1| carbamoyl-phosphate synthase, large subunit [Methanothermobacter
           marburgensis str. Marburg]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 40/178 (22%)

Query: 18  PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLK 77
           PV     ++SV  A  A+  +  P+ V  +    G             + GGV    +  
Sbjct: 140 PVPAARAVNSVEEALEAVDEIGYPVIVRPAFTLGG-------------TGGGV--AHNRD 184

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
            +I      L  +            +N V ++      +E    ++ DR    +      
Sbjct: 185 ELIEIATRGLEMSF-----------INQVLIDQSVLGWKEFEYEVMRDRNDTCIIV---- 229

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQARIDGG 188
               ++E +          +++ P   ++ ED          +   L ++G   I   
Sbjct: 230 ---CNMENIDPMGIHTGESVVVAPAQTLSDEDNQRLRDAAIKIIRALRIEGGCNIQFA 284



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +P A   +  S   A    + +  P+ V  S +  G
Sbjct: 664 RVLDKLGIPQAPYGIAKSFEDAREVAERIGYPVLVRPSYVLGG 706


>gi|327474346|gb|EGF19752.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK408]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|327470856|gb|EGF16312.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK330]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAEIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|327460200|gb|EGF06537.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK1057]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAEIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|325687612|gb|EGD29633.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK72]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|324992755|gb|EGC24675.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK405]
 gi|324994599|gb|EGC26512.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK678]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|306814352|ref|ZP_07448514.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli NC101]
 gi|305851746|gb|EFM52198.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli NC101]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 79/238 (33%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ V+K         +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPV-VLK--------LRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + +  D   G +  +   +GG++        P+    + + PL       + +      
Sbjct: 586 RVVVEYDPVFGPLIMLG--EGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|300927711|ref|ZP_07143279.1| CoA binding domain protein [Escherichia coli MS 187-1]
 gi|300464264|gb|EFK27757.1| CoA binding domain protein [Escherichia coli MS 187-1]
 gi|323941153|gb|EGB37338.1| acetyltransferase [Escherichia coli E482]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|297519216|ref|ZP_06937602.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli OP50]
          Length = 648

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 243 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 291

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 292 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 347

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 348 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 399

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 400 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 456


>gi|293415853|ref|ZP_06658496.1| hypothetical protein ECDG_02420 [Escherichia coli B185]
 gi|291433501|gb|EFF06480.1| hypothetical protein ECDG_02420 [Escherichia coli B185]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|253772516|ref|YP_003035347.1| GCN5-related N-acetyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162559|ref|YP_003045667.1| acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit
           [Escherichia coli B str. REL606]
 gi|242378184|emb|CAQ32959.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit,
           ATP-binding subunit [Escherichia coli BL21(DE3)]
 gi|253323560|gb|ACT28162.1| GCN5-related N-acetyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974460|gb|ACT40131.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli B str.
           REL606]
 gi|253978627|gb|ACT44297.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli BL21(DE3)]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|224367560|ref|YP_002601723.1| SucC2 [Desulfobacterium autotrophicum HRM2]
 gi|223690276|gb|ACN13559.1| SucC2 [Desulfobacterium autotrophicum HRM2]
          Length = 709

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 77/237 (32%), Gaps = 36/237 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E++AK LL+ +    +   V  S   A      + G + +         +      ++
Sbjct: 497 LLEHEAKQLLKLHGASTSADKVALSEDQAVEMANQMNGAVVLKIVSPDILHKSDAGGVKI 556

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              ++G +R+  +          +L +          G     + V   A+   E+ +  
Sbjct: 557 NLKTEGQIRIAYN--------EIMLNAKNYNPDADIIG-----ILVTPMANSGLEVIVGT 603

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
            +D   G    +    GG+ +E +        + L I P           +         
Sbjct: 604 KIDDQFG-PVIMYGL-GGIMVEIMKDVT---FWVLPISPTS------ARKMIGETRSSVI 652

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  +G  +     +     +      ++  +++NP+I+   G L ++D++I  
Sbjct: 653 LDGIRGQKGYDKKALKRILLLCSELIESYPEIQEMDLNPVILHHEG-LDIVDARIIL 708


>gi|171915262|ref|ZP_02930732.1| carbamoyl-phosphate synthase large subunit [Verrucomicrobium
           spinosum DSM 4136]
          Length = 1089

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 49/163 (30%), Gaps = 36/163 (22%)

Query: 11  LLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           L +    K  + + +  V   +  A    + +     +++     GG G G         
Sbjct: 131 LFKNAMLKIGLDLPQSGVAHKMEEATIIAEEIGTYPLIIRPAFTLGGSGGG--------- 181

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +  + +   + +   +  +            VN V +E+     +E  + ++ DR
Sbjct: 182 -----IAYNREEFETIVARGIDMS-----------PVNEVLIEESLLGWKEFEMEVMRDR 225

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
               V           IE +          + + P+  +T  +
Sbjct: 226 ADNCVVI-------CSIENLDPMGVHTGDSITVAPIQTLTDRE 261


>gi|82778012|ref|YP_404361.1| hypothetical protein SDY_2827 [Shigella dysenteriae Sd197]
 gi|309784594|ref|ZP_07679229.1| acetyltransferase, GNAT family [Shigella dysenteriae 1617]
 gi|81242160|gb|ABB62870.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308927491|gb|EFP72963.1| acetyltransferase, GNAT family [Shigella dysenteriae 1617]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|78356584|ref|YP_388033.1| pyruvate carboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218989|gb|ABB38338.1| Pyruvate carboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 471

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 84/278 (30%), Gaps = 33/278 (11%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K L R   VP   G    I     AE   ++L         Q   G        +  A  
Sbjct: 125 KRLARSLGVPTVPGSDKPIYDEMEAEKVAQSLFEF------QEEQGVERPLVLVKASAGG 178

Query: 67  KG-GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G G+    SL    S  R I    L  +Q    G     V +E   +    L + ++ D
Sbjct: 179 GGMGIEEVHSLDLFRSVYRRIRNYAL--RQFNDEG-----VLIEQRVNDFNHLEVQIVSD 231

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ--GQA 183
           R+        +      I+        +I     D      + D   L + +       A
Sbjct: 232 RSGKNPVHFGTR--NCSIQSTGLQKRVEIAP-GFDSSSYSYAFDADKLLEDITNHSLAMA 288

Query: 184 RIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRV---LDSKISFDDNALYRHLDI 239
           R  G D      +    D    L+E+N  I ++NG       +  K   D  A    + +
Sbjct: 289 RKVGYDNVGTWEWIVSRDGRPFLMEVNTRIQVENGVSAAIARIHGKGGVDIIAEQIRVGL 348

Query: 240 QELRDVSEED--------SREIEAKQHNLSYIALDGNI 269
            E    ++ED           I A+  +  +    G I
Sbjct: 349 GEPLGYTQEDITFEGVGIEYRIIAEDPDNRFTPWVGRI 386


>gi|60681705|ref|YP_211849.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           NCTC 9343]
 gi|265763726|ref|ZP_06092294.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           2_1_16]
 gi|81315230|sp|Q5LD90|PURT_BACFN RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|60493139|emb|CAH07920.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           NCTC 9343]
 gi|263256334|gb|EEZ27680.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           2_1_16]
 gi|301163248|emb|CBW22798.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           638R]
          Length = 388

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 33/165 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYYYAKSLEELKEAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+  + L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSAAELEHAWEY-----------GCNGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
                      G +   +   DY +      IDP     +ED+A 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPAHLKEAEDMAE 242


>gi|194437641|ref|ZP_03069737.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli 101-1]
 gi|194423447|gb|EDX39438.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli 101-1]
 gi|323961199|gb|EGB56812.1| acetyltransferase [Escherichia coli H489]
 gi|323971089|gb|EGB66336.1| acetyltransferase [Escherichia coli TA007]
          Length = 886

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|327489732|gb|EGF21522.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK1058]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAEIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|325690585|gb|EGD32588.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK115]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|288905532|ref|YP_003430754.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           gallolyticus UCN34]
 gi|288732258|emb|CBI13825.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           gallolyticus UCN34]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A +  +++  P+ V  +    G                
Sbjct: 133 KQLMEDLNQPIPESEIVNTVDEAVAFAESIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  +  + + +       L  + +T+ 
Sbjct: 178 GGGMCDNEEELREIAENGLKLSPVTQC 204


>gi|12323802|gb|AAG51870.1|AC079675_5 ATP citrate-lyase, putative, 3' partial; 19757-20168 [Arabidopsis
          thaliana]
          Length = 92

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 21/99 (21%)

Query: 2  NIHEYQAKALLRKY-----N--VPVAKGVVI---SSVHAAESAIKTLPGPLYVVKSQIHA 51
           I EY +K L++++        +P+ + V I   + ++        L     VVK  +  
Sbjct: 5  KIREYDSKRLVKEHFKRLSGQELPI-RSVQINQETDLNELVEREPWLSSEKLVVKPDMLF 63

Query: 52 GGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGST 90
          G RGK     L  D             V + ++E LG  
Sbjct: 64 GKRGKSGLVALNLDF----------ADVATFVKERLGKE 92


>gi|159118773|ref|XP_001709605.1| Acyl-CoA synthetase [Giardia lamblia ATCC 50803]
 gi|157437722|gb|EDO81931.1| Acyl-CoA synthetase [Giardia lamblia ATCC 50803]
          Length = 905

 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 49/265 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFK 60
           ++EY+A  L     + V +        +  S IKT   P   YV+K  I           
Sbjct: 35  LYEYEAYELFELIGIKVPEFRYFPLHSSLASQIKTFMKPNQKYVIKCHIPG--------- 85

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR---- 116
            L     GG+ +     ++ +D+   +            G  +  V V + A        
Sbjct: 86  CLHKTDIGGIMLFKDRSNIEADLEPFVNKL------KSAGHNLEGVIVVEMAKFYDSGMS 139

Query: 117 --ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
             EL +S   D   G         GG  +E   K   Q    + +   I + +   A   
Sbjct: 140 NGELLISAFEDTGFGPCVCFG--LGGTGVEYYKKVMRQGHSSIFLPSWINLANSTAAMAA 197

Query: 175 --------DMLE---------LQGQARIDGGDLFPNLYKAFCDKDMSL------LEINP- 210
                    +L                +    +   L + +C  + +       +EINP 
Sbjct: 198 LERLPVSQFLLGKVRGSKRLISSIDQVVSPLSILQALLRHYCRNNATTKYVIREIEINPA 257

Query: 211 LIIMKNGRLRVLDSKISFDDNALYR 235
           ++  + G L  LD+ +    N  Y+
Sbjct: 258 VVERETGNLLALDAVVRILPNPSYK 282


>gi|327313557|ref|YP_004328994.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella denticola
           F0289]
 gi|326944331|gb|AEA20216.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella denticola
           F0289]
          Length = 393

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 42/162 (25%), Gaps = 32/162 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     +    + A   +  P  VVK  + + G G+                  +
Sbjct: 115 GLRTAKYFYAKTYEEFKEAADEIGFPC-VVKPLMSSSGHGQSY--------------VHN 159

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
              +                 G  G  V  V +E+  D   E  L  L            
Sbjct: 160 DDELQEA--------FKNAMEGARGD-VKEVIIEEFIDFDSEFTL--LTVTQKNGPTLFC 208

Query: 134 --IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             I   Q G D  E  +  P  I    +     +  E   +L
Sbjct: 209 PPIGHVQKGGDYRESWQ--PYTISDEALQQAEHMADEVTRAL 248


>gi|312085612|ref|XP_003144748.1| hypothetical protein LOAG_09172 [Loa loa]
 gi|307760089|gb|EFO19323.1| hypothetical protein LOAG_09172 [Loa loa]
          Length = 63

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           +G  V+    LIA + L +I+  DLD AA+ +V   + V
Sbjct: 9   KGTRVEDAKALIAAANLRMISCDDLDQAAKMVVKLSEIV 47


>gi|225164253|ref|ZP_03726525.1| Phosphoribosylamine--glycine ligase [Opitutaceae bacterium TAV2]
 gi|224801124|gb|EEG19448.1| Phosphoribosylamine--glycine ligase [Opitutaceae bacterium TAV2]
          Length = 324

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 24/122 (19%)

Query: 9   KALLRKYNVPV-AKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K +L+KY +P    G+  S+    ++A+      G   V+K+   A G+           
Sbjct: 68  KQILQKYKIPTAPAGIFTSNNSQLDAALAYVRQRGAPIVIKADGLAAGK----------- 116

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V  +L    + +R++L       + G  G   + + VED         L ++  
Sbjct: 117 ---GVIVAQTLPEAETAVRDMLA----GGKFGAAG---SQILVEDCLTGEETSILVVVSG 166

Query: 126 RT 127
           R 
Sbjct: 167 RD 168


>gi|207093264|ref|ZP_03241051.1| carbamoyl phosphate synthase large subunit [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 282

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 99  QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 145

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++      +  L ++            +N + +E+     +E  + ++  
Sbjct: 146 --GGSGVAYNIEEFQELAKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 190

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R S     I        IE +          + I P + +T ++   + D 
Sbjct: 191 RDSKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 236


>gi|56962809|ref|YP_174535.1| phosphoribosylamine--glycine ligase [Bacillus clausii KSM-K16]
 gi|56909047|dbj|BAD63574.1| phosphoribosylamine--glycine ligase [Bacillus clausii KSM-K16]
          Length = 431

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY++P  K    S    A + +K    P+ VVK+   A G+             
Sbjct: 106 AKEIMTKYSIPTGKAKAFSDYEEAVAYVKQEGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+     L   L+    G  G+    V VE+  +   EL L   V   
Sbjct: 152 -GVTVALTEEEAIAA----LRHVLVESAFGEAGA---QVVVEEYLE-GEELSLMAFVSGN 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVVPMV 208


>gi|258654396|ref|YP_003203552.1| carbamoyl-phosphate synthase large subunit [Nakamurella
           multipartita DSM 44233]
 gi|258557621|gb|ACV80563.1| carbamoyl-phosphate synthase, large subunit [Nakamurella
           multipartita DSM 44233]
          Length = 1124

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 24/172 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++R     V +  V  ++    +A+  L  P+ V         R       L +    
Sbjct: 138 KDVVRAVGGDVPRSAVCHTMDEVRAAVAELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNC-VYVEDGADILRELYLSLLVDRT 127
              +  +   V       L ++  +   G     V+  V +E+     +E  L L+ D  
Sbjct: 186 ---MAYTDADVERIAGGGLAASQASFGPGDGNQNVHASVLIEESVLGWKEFELELMRDGH 242

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
              V           IE +          + + P + +T  +   + D L L
Sbjct: 243 DNAVVV-------CSIENLDPMGVHTGDSITVAPSMTLTDREYQRMRD-LGL 286



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           LLR+  +P     +  S   A++   T+  P+ V  S +  GGRG
Sbjct: 703 LLREAGLPAPAYGMAVSFPDAQAVASTIGYPVLVRPSYVL-GGRG 746


>gi|119630230|gb|EAX09825.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform CRA_a
           [Homo sapiens]
          Length = 514

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|509033|dbj|BAA06809.1| GARS protein [Homo sapiens]
          Length = 433

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|15679899|ref|NP_277017.1| pyruvate carboxylase subunit A [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|6685809|sp|O27939|PYCA_METTH RecName: Full=Pyruvate carboxylase subunit A; AltName: Full=Pyruvic
           carboxylase A
 gi|2623051|gb|AAB86377.1| biotin carboxylase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 491

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 39/212 (18%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L++K  VPV  G    +S    A     ++  P+ ++K+    GG G     E    
Sbjct: 119 SKKLMKKAGVPVIPGTDQGVSDPDEAARIADSIGYPV-IIKASAGGGGIGMRAVYEED-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  +++S  S      G                 VY+E   +  R +   ++ D
Sbjct: 176 -----ELIRAMESTQSVAASAFGDP--------------TVYIEKYLERPRHIEFQVMAD 216

Query: 126 RTSGMVAFIASTQGGMDI--EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
             SG V  +A  +  +    +++ ++ P  I    +   +G          + +  +   
Sbjct: 217 -ESGNVIHLADRECSIQRRHQKLIEEAPSPIMTPELRERMGS---AAVKAAEYIGYENAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           + + D   LE+N  I ++
Sbjct: 273 TVEF---------LYSNGDFYFLEMNTRIQVE 295


>gi|332362145|gb|EGJ39947.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK49]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAEIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|327462491|gb|EGF08815.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK1]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|325978522|ref|YP_004288238.1| carbamoyl phosphate synthase large subunit [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178450|emb|CBZ48494.1| carbamoyl phosphate synthase large subunit [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A +  +++  P+ V  +    G                
Sbjct: 133 KQLMEDLNQPIPESEIVNTVDEAVAFAESIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  +  + + +       L  + +T+ 
Sbjct: 178 GGGMCDNEEELREIAENGLKLSPVTQC 204


>gi|324991001|gb|EGC22935.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK353]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|306831618|ref|ZP_07464776.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|304426403|gb|EFM29517.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 1059

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A +  +++  P+ V  +    G                
Sbjct: 133 KQLMEDLNQPIPESEIVNTVDEAVAFAESIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  +  + + +       L  + +T+ 
Sbjct: 178 GGGMCDNEEELREIAENGLKLSPVTQC 204


>gi|254445628|ref|ZP_05059104.1| acetyltransferase, GNAT family [Verrucomicrobiae bacterium DG1235]
 gi|198259936|gb|EDY84244.1| acetyltransferase, GNAT family [Verrucomicrobiae bacterium DG1235]
          Length = 892

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 46/246 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK  +  Y +      V ++   A +A   L  P+ +                  
Sbjct: 491 LSEYEAKQFIAHYGIESTPHAVATTPAKASAAAAKLGFPVAM----------KILSPDIF 540

Query: 63  PADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                GGV++   S ++  +  ++I    +   +     +R++ V VE       EL + 
Sbjct: 541 HKTDVGGVQLHIRSQRAAATAYKQI----IADVKAKAPEARIDGVLVEKMVSKKYELIIG 596

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
               R       I    GG+ +E         IFK   D  +G+   ++A L   +    
Sbjct: 597 --SKRDKLFGPVIVFGMGGIGVE---------IFK---DISVGIPPLNMA-LAKHMIEGT 641

Query: 178 -------ELQGQARIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
                    +G   +D   L   LY+         ++  ++INPL I + G +  LD+KI
Sbjct: 642 RIYKLLAGYRGMKAVDLTSLQFLLYRFSYMIMEFPEIQEIDINPLAIDETGSI-ALDAKI 700

Query: 227 SFDDNA 232
             D  A
Sbjct: 701 IIDPKA 706


>gi|28416899|ref|NP_780294.1| trifunctional purine biosynthetic protein adenosine-3 isoform 2
           [Homo sapiens]
 gi|24660366|gb|AAH38958.1| Phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase [Homo sapiens]
 gi|62739902|gb|AAH93641.1| Phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase [Homo sapiens]
 gi|75516587|gb|AAI01566.1| Phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform 2 [Homo
           sapiens]
 gi|119630232|gb|EAX09827.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform CRA_c
           [Homo sapiens]
 gi|119630234|gb|EAX09829.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase, isoform CRA_c
           [Homo sapiens]
          Length = 433

 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFILSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|331697311|ref|YP_004333550.1| carbamoyl-phosphate synthase large subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952000|gb|AEA25697.1| carbamoyl-phosphate synthase, large subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 1099

 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 54/167 (32%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +++     V +  V  S+    +A+  L  P+ +         R       L +    
Sbjct: 133 KEIVQSVGGDVPRSAVCHSMDEVRAAVAELGLPVVI---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +       L ++            V  V +E+     +E  L L+ D  +
Sbjct: 181 ---MAHTPEDLDRLAGAGLAAS-----------PVTEVLIEESVLGWKEYELELMRD-HA 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE +          + + P + +T  +  ++ D
Sbjct: 226 DNVVVVCS------IENLDPMGVHTGDSITVAPAMTLTDREYQTMRD 266



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LR+  +P       +S   A      +  P+ V  S +  GGRG
Sbjct: 680 EVLRRAGLPAPAFGTATSFEQARDIATRIGYPVLVRPSYVL-GGRG 724


>gi|225867649|ref|YP_002743597.1| phosphoribosylamine-glycine ligase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225700925|emb|CAW97611.1| phosphoribosylamine-glycine ligase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 420

 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAYGTFSDFAKAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +   R++L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAARDML----LDNKFGDSGARV---VIEEFL 189


>gi|254422390|ref|ZP_05036108.1| phosphoribosylamine--glycine ligase [Synechococcus sp. PCC 7335]
 gi|196189879|gb|EDX84843.1| phosphoribosylamine--glycine ligase [Synechococcus sp. PCC 7335]
          Length = 430

 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ K N+P A   V +    A + ++    P+ V K+   A G+             
Sbjct: 103 AKDLMAKANIPTAAAAVFTDAEDAIAYVQKQGAPI-VAKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  I+ I         + + G  G     V +E+  +  +E+ +  + D  
Sbjct: 149 -GVTVAMAVEEAIAAIESAF-----SGRFGAAG---ERVVIEEFLE-GQEVSVLAVTDGQ 198

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 199 TIRPLLPA 206


>gi|89097093|ref|ZP_01169984.1| phosphoribosylamine--glycine ligase [Bacillus sp. NRRL B-14911]
 gi|89088473|gb|EAR67583.1| phosphoribosylamine--glycine ligase [Bacillus sp. NRRL B-14911]
          Length = 427

 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 25/129 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KY++P A+    +    A S +     P+ V+K+   A G+             
Sbjct: 106 AKELMEKYDIPTAEYRAFTDYEKARSYLIEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL-GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  +L      + E++ G+          G     V +E+  +   E  L   V+ 
Sbjct: 152 -GVTVAITLDEAQQALEEMMVGARF--------GEASAKVVIEEFLE-GEEFSLMAFVNG 201

Query: 127 TSGMVAFIA 135
           ++ +   IA
Sbjct: 202 STVVPLEIA 210


>gi|323349797|gb|EGA84012.1| Dur1,2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1686

 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G  +      
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIGLQK------ 800

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ +   ++   G T      G  G     V++E   +  R + + L+ 
Sbjct: 801 -----VDSEEDIEHIFETVKHQ-GETFF----GDAG-----VFLERFIENARHVEVQLMG 845

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 846 DGFGKAIAL------GERDCSLQRRNQKVIEETPAPNLPEKTRLALRKAAESLG--SLLN 897

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y      +   LE+N
Sbjct: 898 YKCAGTVEFIYDE-KKDEFYFLEVN 921


>gi|323334643|gb|EGA76017.1| Dur1,2p [Saccharomyces cerevisiae AWRI796]
          Length = 1835

 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G  +      
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIGLQK------ 800

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ +   ++   G T      G  G     V++E   +  R + + L+ 
Sbjct: 801 -----VDSEEDIEHIFETVKHQ-GETFF----GDAG-----VFLERFIENARHVEVQLMG 845

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 846 DGFGKAIAL------GERDCSLQRRNQKVIEETPAPNLPEKTRLALRKAAESLG--SLLN 897

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y      +   LE+N
Sbjct: 898 YKCAGTVEFIYDE-KKDEFYFLEVN 921


>gi|225869518|ref|YP_002745465.1| phosphoribosylamine-glycine ligase [Streptococcus equi subsp. equi
           4047]
 gi|225698922|emb|CAW91928.1| phosphoribosylamine-glycine ligase [Streptococcus equi subsp. equi
           4047]
          Length = 420

 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 107 AKQIMVKYGIPTAAYGTFSDFAKAKAYIEEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +++  +   R++L    +  + G +G+RV    +E+  
Sbjct: 153 -GVVVAETVEQAVEAARDML----LDNKFGDSGARV---VIEEFL 189


>gi|190408639|gb|EDV11904.1| urea amidolyase [Saccharomyces cerevisiae RM11-1a]
 gi|290878226|emb|CBK39285.1| Dur1,2p [Saccharomyces cerevisiae EC1118]
 gi|323356142|gb|EGA87947.1| Dur1,2p [Saccharomyces cerevisiae VL3]
          Length = 1835

 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G  +      
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIGLQK------ 800

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ +   ++   G T      G  G     V++E   +  R + + L+ 
Sbjct: 801 -----VDSEEDIEHIFETVKHQ-GETFF----GDAG-----VFLERFIENARHVEVQLMG 845

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 846 DGFGKAIAL------GERDCSLQRRNQKVIEETPAPNLPEKTRLALRKAAESLG--SLLN 897

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y      +   LE+N
Sbjct: 898 YKCAGTVEFIYDE-KKDEFYFLEVN 921


>gi|151946596|gb|EDN64818.1| urea amidolyase [Saccharomyces cerevisiae YJM789]
          Length = 1835

 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G  +      
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIGLQK------ 800

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ +   ++   G T      G  G     V++E   +  R + + L+ 
Sbjct: 801 -----VDSEEDIEHIFETVKHQ-GETFF----GDAG-----VFLERFIENARHVEVQLMG 845

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 846 DGFGKAIAL------GERDCSLQRRNQKVIEETPAPNLPEKTRLALRKAAESLG--SLLN 897

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y      +   LE+N
Sbjct: 898 YKCAGTVEFIYDE-KKDEFYFLEVN 921


>gi|6319685|ref|NP_009767.1| Dur1,2p [Saccharomyces cerevisiae S288c]
 gi|585072|sp|P32528|DUR1_YEAST RecName: Full=Urea amidolyase; Includes: RecName: Full=Urea
           carboxylase; Includes: RecName: Full=Allophanate
           hydrolase
 gi|536588|emb|CAA85172.1| DUR1,2 [Saccharomyces cerevisiae]
 gi|256273778|gb|EEU08702.1| Dur1,2p [Saccharomyces cerevisiae JAY291]
 gi|285810540|tpg|DAA07325.1| TPA: Dur1,2p [Saccharomyces cerevisiae S288c]
          Length = 1835

 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G  +      
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIGLQK------ 800

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ +   ++   G T      G  G     V++E   +  R + + L+ 
Sbjct: 801 -----VDSEEDIEHIFETVKHQ-GETFF----GDAG-----VFLERFIENARHVEVQLMG 845

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 846 DGFGKAIAL------GERDCSLQRRNQKVIEETPAPNLPEKTRLALRKAAESLG--SLLN 897

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y      +   LE+N
Sbjct: 898 YKCAGTVEFIYDE-KKDEFYFLEVN 921


>gi|291166265|gb|EFE28311.1| acetyl coenzyme A synthetase (ADP forming) [Filifactor alocis ATCC
           35896]
          Length = 469

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 34/160 (21%)

Query: 264 ALDG-NIGCMVNGAGLAMATMDIIKLYG------------------------GAPANFLD 298
            L G NI  + NG G  + + D  +  G                        G+P N +D
Sbjct: 303 PLQGDNIVMITNGGGSGLLSCDHFERCGLPLHELSEISPGLAGRIRAYMPMFGSPLNPVD 362

Query: 299 VGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVK-INIPLV 356
           + G A   +   AF     D  V GIL +I    +     +V  ++   +  K +N P +
Sbjct: 363 ISGTASPIQYKGAFHQAIRDPKVHGILGSICPTAVTDVGAVVDIVIELHEMYKHLNKPFI 422

Query: 357 MRLEGANV-DIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           M  +G          + + G+           A++ V+A+
Sbjct: 423 MECQGGEECQEAIMKLRDHGIPAYPT------AEQSVNAM 456


>gi|229086511|ref|ZP_04218683.1| Pyruvate carboxylase [Bacillus cereus Rock3-44]
 gi|228696828|gb|EEL49641.1| Pyruvate carboxylase [Bacillus cereus Rock3-44]
          Length = 1148

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 37/203 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           N+PV  G    ++S+   E   +    P+ ++K+ +  GGRG           + G  ++
Sbjct: 133 NIPVIPGSDGPVNSIEEVEEFAEKYDYPI-IIKASLGGGGRGM-------RIVRNGDELQ 184

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S     S+ +   G+                VYVE   +  + + + +L D    +V  
Sbjct: 185 ESYDRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHL 230

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFP 192
               +    ++   +   +      I P + +  E    +C+   +L             
Sbjct: 231 Y---ERDCSVQRRHQKVVE------IAPSVSLPDELRHRICEAAVQLTKNVNYLNAGTVE 281

Query: 193 NLYKAFCDKDMSLLEINPLIIMK 215
            L K     D   +E+NP + ++
Sbjct: 282 FLVK---GNDFYFIEVNPRVQVE 301


>gi|190576081|ref|YP_001973926.1| phosphoribosylamine--glycine ligase [Stenotrophomonas maltophilia
           K279a]
 gi|190014003|emb|CAQ47643.1| putative phosphoribosylglycineamide synthetase [Stenotrophomonas
           maltophilia K279a]
          Length = 427

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++N+P      + +   A  A     G   VVK+   A G+             
Sbjct: 108 AKDFLARHNIPT-AFYAVHTDVDAALAYIREKGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +L      +R++L         G  G+RV    +E+  D     ++S++
Sbjct: 154 -GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLDGEEASFISMV 201


>gi|30248927|ref|NP_840997.1| cyanophycin synthetase [Nitrosomonas europaea ATCC 19718]
 gi|30138544|emb|CAD84834.1| Cyanophycin synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 856

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    +PV  G  + S   A +A   +  P+ V+K Q   G +GKG    L    + 
Sbjct: 208 KMLLHTAGIPVPTGRPVISADDAWAAACEIGAPI-VIKPQ--DGNQGKGVTANLTDRDQ- 263

Query: 69  GVRVESSLKSVISDIREILGSTLITK 94
                  +K+      E   + L+ +
Sbjct: 264 -------IKAAYHVAAERSRNVLVER 282


>gi|316941823|gb|ADU75857.1| cyanophycin synthetase [Clostridium thermocellum DSM 1313]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 13/110 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LL +  +PV  G    S   A    + +  P+ V+K         +G+   L    +
Sbjct: 218 AKRLLAENKIPVPDGDTAYSFEGALQIAREIGFPV-VIKPV----DSNQGKGVTLNIKDE 272

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
             + +  +             S ++  +    G     + V D    + E
Sbjct: 273 QEMEIAYN--EARKY------SRVVLVEKYVKGKDYRVLVVGDRVAAVAE 314


>gi|257126337|ref|YP_003164451.1| phosphoribosylamine--glycine ligase [Leptotrichia buccalis
           C-1013-b]
 gi|257050276|gb|ACV39460.1| phosphoribosylamine/glycine ligase [Leptotrichia buccalis C-1013-b]
          Length = 421

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 24/138 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY +  A   +  +   A+  +        V+K+   A G+             
Sbjct: 106 SKDFMKKYGIKTAVYEIFDNSEKAKEFLNNWKDFPVVIKASGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L   I  + +I    ++ ++ G  G   N V +E+  D +    +S+L    
Sbjct: 153 -GVIIAQNLDEAIKAVEDI----MVDEKFGNAG---NQVVIEEFLDGVE---VSILSFTD 201

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++  + S +    I E
Sbjct: 202 SKVIVPLLSAKDHKKIGE 219


>gi|281418842|ref|ZP_06249861.1| cyanophycin synthetase [Clostridium thermocellum JW20]
 gi|281407926|gb|EFB38185.1| cyanophycin synthetase [Clostridium thermocellum JW20]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 13/110 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LL +  +PV  G    S   A    + +  P+ V+K         +G+   L    +
Sbjct: 218 AKRLLAENKIPVPDGDTAYSFEGALQIAREIGFPV-VIKPV----DSNQGKGVTLNIKDE 272

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
             + +  +             S ++  +    G     + V D    + E
Sbjct: 273 QEMEIAYN--EARKY------SRVVLVEKYVKGKDYRVLVVGDRVAAVAE 314


>gi|125974689|ref|YP_001038599.1| cyanophycin synthetase [Clostridium thermocellum ATCC 27405]
 gi|125714914|gb|ABN53406.1| cyanophycin synthetase [Clostridium thermocellum ATCC 27405]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 13/110 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LL +  +PV  G    S   A    + +  P+ V+K         +G+   L    +
Sbjct: 218 AKRLLAENKIPVPDGDTAYSFEGALQIAREIGFPV-VIKPV----DSNQGKGVTLNIKDE 272

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
             + +  +             S ++  +    G     + V D    + E
Sbjct: 273 QEMEIAYN--EARKY------SRVVLVEKYVKGKDYRVLVVGDRVAAVAE 314


>gi|270290830|ref|ZP_06197054.1| carbamoyl-phosphate synthase, large subunit [Pediococcus
           acidilactici 7_4]
 gi|270280890|gb|EFA26724.1| carbamoyl-phosphate synthase, large subunit [Pediococcus
           acidilactici 7_4]
          Length = 1057

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 43/214 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           ++L+++   PV    + ++V  A    K    P+ V             R       + G
Sbjct: 133 RSLMKELGEPVPDSAIATTVAEAVDFAKQSGFPVIV-------------RPAFTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   +    +        G TL           V  V +E     ++E+   ++  R  
Sbjct: 180 GI--VNDETELRKIAAN--GLTLS---------PVTQVLIEQSIAGMKEIEFEVM--RDH 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
              A +       D   V       I    +    D  +    +    +   L+++G   
Sbjct: 225 ADNAIVVCNMENFDP--VGIHTGDSIVYAPVQTLSDREVQELRDAALRIIRALKIEGGCN 282

Query: 185 IDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +    D   N Y         ++E+NP +   + 
Sbjct: 283 VQFALDPVQNRY--------YVIEVNPRVSRSSA 308


>gi|152991385|ref|YP_001357107.1| biotin carboxylase [Nitratiruptor sp. SB155-2]
 gi|151423246|dbj|BAF70750.1| acetyl-CoA carboxylase, biotin carboxylase [Nitratiruptor sp.
           SB155-2]
          Length = 447

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AK +++   VPV  G    I +V  A+   K +  P+ ++K+
Sbjct: 121 AKEVMKSAGVPVVPGSEGAIKNVEEAKKIAKEIGYPV-ILKA 161


>gi|33860620|ref|NP_892181.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
 gi|33633562|emb|CAE18519.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 449

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + +  VP   G   ++SSV  A    + +  P+ ++K+    GGRG  R  E  A+
Sbjct: 119 AKETMERVGVPTVPGSKGLLSSVEEAYEMAQEIGYPV-IIKATAGGGGRGM-RLVENKAN 176

Query: 66  SKGGVRVESSLKSVI 80
            +   +         
Sbjct: 177 LEKMFKAAQGEAEAA 191


>gi|21222470|ref|NP_628249.1| phosphoribosylamine--glycine ligase [Streptomyces coelicolor A3(2)]
 gi|25091085|sp|Q9RKL4|PUR2_STRCO RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|5918470|emb|CAB56348.1| phosphoribosylamine-glycine ligase (EC 6.3.4.13) [Streptomyces
           coelicolor A3(2)]
          Length = 416

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 33/125 (26%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++    ++A+     P YVVK    A G+             
Sbjct: 106 AKDVMACAGVPTARSYVCTNPAEVDAALAAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V   +++  +                      + V VE+  D   E+ L  + D  
Sbjct: 152 -GVVVTDDVEAARAHANA-----------------CDRVVVEEFLD-GPEVSLFAVTDGE 192

Query: 128 SGMVA 132
           +    
Sbjct: 193 NVRPL 197


>gi|315123855|ref|YP_004065859.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315017577|gb|ADT65670.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 746

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268


>gi|303242183|ref|ZP_07328672.1| cyanophycin synthetase [Acetivibrio cellulolyticus CD2]
 gi|302590265|gb|EFL60024.1| cyanophycin synthetase [Acetivibrio cellulolyticus CD2]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR + +PV +G V  S   A    K +  P+ VVK         +G+   +    + 
Sbjct: 219 KNILRDFMIPVPEGDVSYSEEGAIYTAKKIGFPV-VVKP----LDSNQGKGVTVNIRDEQ 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
            VR+    K      + +L       +    G     + + D      E
Sbjct: 274 DVRIAF--KEAKKFSKCVL------VEKYIYGKDYRVLVIGDKVSAAAE 314


>gi|212639629|ref|YP_002316149.1| carbamoyl phosphate synthase large subunit [Anoxybacillus
           flavithermus WK1]
 gi|212561109|gb|ACJ34164.1| Carbamoylphosphate synthase large subunit [Anoxybacillus
           flavithermus WK1]
          Length = 1074

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P  +G    SV  A    K +  P+ V  S +  G
Sbjct: 683 LAQLGIPQPRGKTAFSVEEAVHIAKDIGYPVLVRPSYVLGG 723


>gi|33600560|ref|NP_888120.1| putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50]
 gi|33568159|emb|CAE32072.1| Putative acetyl-CoA synthetase [Bordetella bronchiseptica RB50]
          Length = 241

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 88/229 (38%), Gaps = 28/229 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            K +L  + + V K  V+    A+ + ++      YV+K               +     
Sbjct: 31  GKRILAGHGIAVPKS-VVLPADASFAQVEGQLAQPYVLK---------LVSPDVIHKTEM 80

Query: 68  GGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           GGVR+  +S  ++     E+       ++    G+RV    VE+ A+   E+ +  L D 
Sbjct: 81  GGVRLNLASPAALRQAADEM------RQRVEQAGARVEGWLVEEMAEPGVEVVVGGLRDP 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--LCDMLELQGQAR 184
             G +  I    GG+ +E + KD   +I  +  +  + +  E  +S  L      Q  + 
Sbjct: 135 EFGPMVMIG--LGGIFVE-IFKDVAFRICPVTREDALDMIGELRSSPLLAGARGKQAVSI 191

Query: 185 IDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
               +    +            +++ L+INPLI+   G +  +D++   
Sbjct: 192 DALVETILRVGGEGGVLLAGQPEVAELDINPLIVSPRGAV-AVDARFIL 239


>gi|257869885|ref|ZP_05649538.1| phosphoribosylglycinamide synthetase [Enterococcus gallinarum EG2]
 gi|257804049|gb|EEV32871.1| phosphoribosylglycinamide synthetase [Enterococcus gallinarum EG2]
          Length = 417

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KY +P A+         A++ I+    P+ V+K+   A G+             
Sbjct: 107 AKELMAKYQIPTAEYQSFVDSEKAKAYIQEKGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++   ++ + E+L       +    G     V +ED  +   E  L   V   
Sbjct: 153 -GVVVAATVDQALAAVEEML-------EEQKFGQSGAKVVIEDFLE-GEEFSLLAFVHEE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 QVYPMVIA 211


>gi|51246040|ref|YP_065924.1| phosphoribosylamine--glycine ligase [Desulfotalea psychrophila
           LSv54]
 gi|50877077|emb|CAG36917.1| probable phosphoribosylamine--glycine ligase [Desulfotalea
           psychrophila LSv54]
          Length = 590

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+KY++P A   V +   AA+  I+    P+ VVK+   A G+              
Sbjct: 107 KNFLQKYSIPTAAFGVFTEREAAKEYIEQQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADIL 115
           GV V  +++     + EI    ++ K  G  G  +   +C+  E+ + I 
Sbjct: 152 GVVVAKTIEEAKKAVDEI----MLDKAFGEAGDSIVVESCLLGEEASFIA 197


>gi|332673757|gb|AEE70574.1| carbamoyl-phosphate synthase, large subunit [Helicobacter pylori
           83]
          Length = 1085

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++     ++  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELVKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R +     I        IE +          + I P + +T ++   + D 
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDA 265


>gi|261822730|ref|YP_003260836.1| GCN5-related N-acetyltransferase [Pectobacterium wasabiae WPP163]
 gi|261606743|gb|ACX89229.1| GCN5-related N-acetyltransferase [Pectobacterium wasabiae WPP163]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 89/263 (33%), Gaps = 22/263 (8%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLNTLPTWIAGDSVEAVHIAEQIGYPVAI---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    + + V      IL     T        R+  + V+  A+    +EL
Sbjct: 531 PHKSEVQGVMLYLQTAREVQQAADAILDRVKRTYPQA----RIYGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            +++  D   G +  +   +GG++  E           + +   + + +     + +   
Sbjct: 587 RIAVEQDPVFGPLIMLG--EGGVEWREKQAAVALPPLNMTLARYLVLQAVKGGKIREYSA 644

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           L+         L   +     D  ++S L+I+PL+   +    +LD  +     +     
Sbjct: 645 LRPLDIPALSRLLVQVSNLILDCPEISRLDIHPLLASGD-TFTLLDVTLHLTPFSGDPQS 703

Query: 238 DIQELRDVSEEDSREIEAKQHNL 260
            +  +R    E    +  K  ++
Sbjct: 704 RL-AIRPYPHELEETVILKNSDI 725


>gi|227537657|ref|ZP_03967706.1| carbamoyl-phosphate synthase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242488|gb|EEI92503.1| carbamoyl-phosphate synthase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 938

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 71/229 (31%), Gaps = 52/229 (22%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E + +   LL+  ++P  K  V  S   A      +  P+ V  S +  G      
Sbjct: 666 MDLAEDRGRFSDLLKSLDIPYPKYGVAESAEEAIVVANQVGYPVLVRPSYVLGG------ 719

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                     G+ +  + + +   +  +L                N V ++   D   E 
Sbjct: 720 ---------QGMSIVINDEDLEKAVVNLL-----------KNLPGNRVLIDHFLDRAEE- 758

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
                           A +    D EEV            I+P  G+ S D +++     
Sbjct: 759 ----------------AESDSICDGEEVHIIG----MMEHIEPA-GIHSGDSSAVLPPFS 797

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
           L    +    +    L KA   K   LL I   +  +N  +   + + S
Sbjct: 798 LSQNVQDKMEEYSKKLAKALNVK--GLLNIQFAVKDENVFVIEANPRAS 844


>gi|225568839|ref|ZP_03777864.1| hypothetical protein CLOHYLEM_04918 [Clostridium hylemonae DSM
           15053]
 gi|225162338|gb|EEG74957.1| hypothetical protein CLOHYLEM_04918 [Clostridium hylemonae DSM
           15053]
          Length = 1074

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + ++ K ++P+ +  + ++V  A +  + +  P+ V  S +  GGRG
Sbjct: 672 REMMEKLDIPMPESGMATTVDEALAIAERIGYPVMVRPSYVL-GGRG 717



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + +AK  V  SV  A +    L  P+                 +        
Sbjct: 133 KKAMDSLGIEMAKSEVAYSVEEALAIADELGYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +   + +     L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNKDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEIVRDSEN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 NMITV 231


>gi|160892510|ref|ZP_02073300.1| hypothetical protein CLOL250_00039 [Clostridium sp. L2-50]
 gi|156865551|gb|EDO58982.1| hypothetical protein CLOL250_00039 [Clostridium sp. L2-50]
          Length = 1067

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A  A   L  P+ V  S +  G                G
Sbjct: 675 EILEKCCIPRPAGKTVFTRDEALEAANELGYPVLVRPSYVLGG---------------QG 719

Query: 70  VRVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
           +++  S K +I  +  I        +       G  V    V DG DI
Sbjct: 720 MQIAISDKDIIEFMDIINRHVQEHPVLVDKYIMGKEVEVDAVCDGEDI 767


>gi|120403648|ref|YP_953477.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           vanbaalenii PYR-1]
 gi|167006448|sp|A1T8H1|CARB_MYCVP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|119956466|gb|ABM13471.1| carbamoyl-phosphate synthase large subunit [Mycobacterium
           vanbaalenii PYR-1]
          Length = 1112

 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LR+  +P  +  + +S   A      +  P+ V  S +  GGRG
Sbjct: 694 EVLRRAGLPAPRFGMATSFDQARRIAAEIGYPVLVRPSYVL-GGRG 738


>gi|315637951|ref|ZP_07893137.1| carbamoyl-phosphate synthase, large subunit [Campylobacter
           upsaliensis JV21]
 gi|315481986|gb|EFU72604.1| carbamoyl-phosphate synthase, large subunit [Campylobacter
           upsaliensis JV21]
          Length = 1091

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +       A  A+  +  PL +  S    G                
Sbjct: 135 KECMKKIGMDLPKSMYAYDYEEALKAVDEIGFPLMIRASYTLGG---------------A 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +L          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 180 GSGVVYNLDEFKDLATAALSLS-----------PIHEILIEESLLGWKEYEMEVIRDRLD 228

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T             
Sbjct: 229 NCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQAMRNASFA 272


>gi|312144569|ref|YP_003996015.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halanaerobium sp. 'sapolanicus']
 gi|311905220|gb|ADQ15661.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halanaerobium sp. 'sapolanicus']
          Length = 387

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 42/170 (24%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L + N+PV K + +SS+   + A +    P  ++KS    G  GKG           
Sbjct: 112 KNMLSQNNIPVPKFIKVSSIDDIKEAAQKFSYP-LMLKS-CTGGYDGKGNIV-------- 161

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 S K +    +++ G                 + VE+     +E  +S+L  R  
Sbjct: 162 ----IDSPKDIKKSYQQLGGDNA-------------KLMVEEYIPFKKE--ISVLACRGL 202

Query: 129 GMVA-------------FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
                             +  T+    I    K+   K+   +++   G+
Sbjct: 203 NGEMKVFPIAENVHKDNILYETKVPASIAASLKEKADKLAFEVLEVFTGI 252


>gi|312137221|ref|YP_004004558.1| acetyl coenzyme a synthetase (ADP forming), alpha domain protein
           [Methanothermus fervidus DSM 2088]
 gi|311224940|gb|ADP77796.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanothermus fervidus DSM 2088]
          Length = 694

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 86/233 (36%), Gaps = 33/233 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY+AK LL  Y +PV +  +  + + A    K L     V+K             + +  
Sbjct: 486 EYKAKKLLDFYELPVPECYLAKNENEALEFCKKLG--KCVMKIV---------SPEIIHK 534

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR-ELYLSLL 123
              GGV +           ++   + +   +      R+  V VE   D  + E+ +   
Sbjct: 535 TEVGGVIINPDNP------KKAYNTLVNNAKKHDPNVRIEGVLVEKFIDEEKIEVIVGAK 588

Query: 124 VDRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
            D+  G    +    GG+ +E   +V+        +  +D +  + S  +        ++
Sbjct: 589 RDKIFG-PVLMVGL-GGIFVEVLDDVSFGVYPITREFAVDMIKDLKSYKILE-----GVR 641

Query: 181 GQARIDGGDLFPNLYKAFCDKDMS----LLEINPLIIMKNGRLRVL-DSKISF 228
           G+ R D   L   L K     D+      +++NP+ +  +G    + D++I  
Sbjct: 642 GRKRKDINFLVECLMKIGVIMDIHEEIKEIDLNPVFVFNDGNGGCIGDARIII 694


>gi|326789550|ref|YP_004307371.1| urea carboxylase [Clostridium lentocellum DSM 5427]
 gi|326540314|gb|ADZ82173.1| urea carboxylase [Clostridium lentocellum DSM 5427]
          Length = 1197

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 89/246 (36%), Gaps = 30/246 (12%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG---RFKE 61
           + A+AL +K  VP+  G  ++SSV  A    K +  P+ ++KS    GG G      FKE
Sbjct: 117 HSARALAKKAGVPLLPGTELLSSVEEAVKEAKKIGYPV-ILKSTAGGGGIGMRICYSFKE 175

Query: 62  LPADSKG------------GVRVESSLKSVISDIREILGS----TLITKQTGPTGSRVNC 105
           L    +G            GV +E  ++       +I G+     +   +   +  R N 
Sbjct: 176 LKEAYEGVCYLAAANFNNAGVFLEKYIEKSRHVEVQIFGNAYGEAVALGERDCSVQRRNQ 235

Query: 106 VYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID----P 161
             VE+         +   + + +  +A  AS Q    +E +  +  +K + L ++     
Sbjct: 236 KVVEESPAPNLPEKVRAAMYKAAEDLAKEASYQSAGTVEFLYDEAEEKFYFLEVNTRLQV 295

Query: 162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
             G+T E +      L+L      +       + +     D   +E+           R 
Sbjct: 296 EHGITEEVL-----GLDLVSWMIKEAAGELKGMKEQLKKPDGHAIEVRVYAEDCLNGFRP 350

Query: 222 LDSKIS 227
              KI 
Sbjct: 351 SSGKID 356


>gi|291541479|emb|CBL14589.1| carbamoyl-phosphate synthase large subunit [Ruminococcus bromii
           L2-63]
          Length = 1350

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL KY++   +GV + +   A      +  P+ +  S +  G                 
Sbjct: 670 ELLEKYHIKRPRGVTVMTTDEALDVADKIGYPVLLRPSYVLGG---------------QN 714

Query: 70  VRVESSLKSVISDIREILGSTL---ITKQTGPTGSRVNCVYVEDGADI 114
           + +  +   V   +  IL   +   I       G+ +    + DG DI
Sbjct: 715 MIIAFNEDDVKEYMAIILAQNIENPILIDKYLQGTELEVDAICDGEDI 762


>gi|153872224|ref|ZP_02001177.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS]
 gi|152071310|gb|EDN68823.1| GCN5-related N-acetyltransferase [Beggiatoa sp. PS]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 89/237 (37%), Gaps = 28/237 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E ++KALL  + +P+    +  + + A    + +  P+   V    I    + K    
Sbjct: 476 LTEMESKALLGAFRIPIVNTAIAHTANEALVLAEAMGFPIAMKVNSPDILNNVQHKSD-- 533

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--REL 118
                 K  +R   S++     I +         QT    +R+N V +   +  L  REL
Sbjct: 534 --VGGVKLNIRNAQSIREAFKSIMQ-------AVQTQFPNARINGVTIGKMSRKLNGREL 584

Query: 119 YLSLLVDRTSGMVAFIASTQGGM-----DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
            + ++ D   G         G M     DI        + +  ++I+      +     L
Sbjct: 585 MVGMVRDPVFG-PVITFGMGGSMVEVMSDIAVSLPPLNRYLANVMIN-----KTRIAKLL 638

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
            +  ++    R    D+   + +  C+   +  ++INPLII +N  +  +D +I  D
Sbjct: 639 GEFRQMPPVNRQVLEDILLRVSEMACELPWLQEIDINPLIIDENDAV-AVDGRIVID 694



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 277 GLAMATMDIIKLYGGAPA-------NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
            + +A +  I L    PA       N +++      +    +      D +V G+L+ + 
Sbjct: 311 DIPLAQLSQITLQTLKPALSETVTPNSINIISDGTPECYQKSVSTCLQDPNVDGVLVILT 370

Query: 330 -GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLN 377
              +     + K I+  + +      L   + G  V+  +RL  ++ + 
Sbjct: 371 PKAMTYPLEVAKAIIE-IADNSPKPILTCWMGGTQVEESHRLFIQARIP 418


>gi|84489992|ref|YP_448224.1| hypothetical protein Msp_1200 [Methanosphaera stadtmanae DSM 3091]
 gi|84373311|gb|ABC57581.1| CarB [Methanosphaera stadtmanae DSM 3091]
          Length = 1061

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 96/317 (30%), Gaps = 57/317 (17%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  ++    N P+ K   ++S+  A  A++ +  P+ V  +    G            
Sbjct: 127 RDLFAEFMERLNEPIPKCHAVNSLEEAFEAVEDIGYPVIVRPAFTLGG------------ 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+   ++ K     +   L  +            +N V +++      E    ++ 
Sbjct: 175 -TGGGI--ANNKKEFEEIVNHGLDMSF-----------INQVLIDESVLGWAEFEYEVM- 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
            R       I      +D   +     + I   ++ P   ++ ED          +   L
Sbjct: 220 -RDKNDSCIIVCNMENIDP--MGIHTGESI---VVAPTQTLSDEDNQRLRNASIKIIRAL 273

Query: 178 ELQGQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-----LDSKISFDDN 231
            ++G   I          YK   + +  +   + L     G         +   ++ D+ 
Sbjct: 274 GIRGGCNIQFAVHPETKEYKV-IEVNPRVSRSSALASKATGYSIAKVSSKIALGMTLDEI 332

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV---NGAGLAMATMDIIKL 288
           +     +     + +      + AK     +    GN G +       G  MA    I+ 
Sbjct: 333 SNDITKETPASFEPA---VDYVIAKIPRWPFDKFKGNTGELGVQMQSTGEVMAIGRTIEE 389

Query: 289 YGGAPANFLDVGGGADQ 305
                   LD+   A +
Sbjct: 390 ALQKAIRSLDIDQEAFE 406


>gi|218288883|ref|ZP_03493134.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218240972|gb|EED08149.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 395

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 33/185 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+ L ++ +PV     ISS+   + A++   G + V   +   G  GKG++         
Sbjct: 118 KSTLAQHGLPVTPFAPISSMDDLDEALERFGGRMVVKTCR--GGYDGKGQW--------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S + +    ++   +    +  G        +  E       E  LS++V R  
Sbjct: 167 ---MVRSREDLEKYAQDWARAIDRHRAAGFDDHP---LIAEAYVPFEGE--LSVIVARNR 218

Query: 129 GM------VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
                    A     +  + +  V   YP+ +     D            + + L + G 
Sbjct: 219 RGEVRAFPPAENIHKRHILHMSIVPARYPEDVIARAEDI--------ARQVAEALGVIGL 270

Query: 183 ARIDG 187
             ++ 
Sbjct: 271 IAVEM 275


>gi|94543719|gb|ABF33767.1| Carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS10270]
          Length = 1073

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 683 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 729



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 148 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 183


>gi|186685843|ref|YP_001869039.1| carbamoyl phosphate synthase large subunit [Nostoc punctiforme PCC
           73102]
 gi|186468295|gb|ACC84096.1| carbamoyl-phosphate synthase, large subunit [Nostoc punctiforme PCC
           73102]
          Length = 1087

 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 32/166 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + +  V V       ++  A++  + +     +++     GG G G              
Sbjct: 136 MARIGVAVCPSDTAETLEEAKAVARQIGSYPLIIRPAFTMGGSGGG-------------- 181

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  + +                 Q G   S V+ + ++      +E  L ++ D  +  V
Sbjct: 182 IAYNQEEFEEMA-----------QVGIDASPVSQILIDQSLLGWKEYELEVMRD-LADNV 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             I S      IE +          + + P   +T ++   L DM 
Sbjct: 230 VIICS------IENLDPMGIHTGDSITVAPAQTLTDKEYQRLRDMA 269


>gi|150951195|ref|XP_001387473.2| urea amidolyase [Scheffersomyces stipitis CBS 6054]
 gi|149388396|gb|EAZ63450.2| urea amidolyase [Pichia stipitis CBS 6054]
          Length = 1822

 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 73/240 (30%), Gaps = 38/240 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    ++     A+     L  P+ V KS    GG G  +      
Sbjct: 741 HSAREIAEKAGVPLVPGSGLVKDALEAKEIAAKLEYPVMV-KSTAGGGGIGLQK------ 793

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S       G  G     V++E   +  R + + +  
Sbjct: 794 -----VDSEKDIERVFETVQHQGKSYF-----GDAG-----VFLERFVEDARHVEVQMFG 838

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T + +    + L       
Sbjct: 839 DGKGRAIAL------GERDCSLQRRNQKVIEETPAPNLPEATRQKMRDAAESLGASMNY- 891

Query: 185 IDGGDLFPNLYK------AFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHL 237
                    +Y        F + +  L   +P+  M  G  L      I+ DD   +   
Sbjct: 892 -KCAGTVEFIYDEKRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLYIAADDPPDFSQK 950


>gi|229631868|sp|A5H0J2|DUR1_SACKL RecName: Full=Urea amidolyase; AltName: Full=Pyrimidine-degrading
           protein 13,15; AltName: Full=Uracil catabolism protein
           3,5; Includes: RecName: Full=Urea carboxylase; Includes:
           RecName: Full=Allophanate hydrolase
 gi|98626707|gb|ABF58890.1| putative urea amidolyase [Lachancea kluyveri]
          Length = 1830

 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    +++S   A+     L  P+ V               K    
Sbjct: 741 HSAREIAEKAGVPLVPGSGLVTSAKEAKEIANKLEYPVMV---------------KSTAG 785

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G++   S   +     E +  T+  +     G   + V++E   +  R + + ++ 
Sbjct: 786 GGGIGLQKVDSENEI-----ERVFETVQHQGKAYFGD--SGVFLERFVENARHVEIQMMG 838

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L      +
Sbjct: 839 DGYGKAIAI------GERDCSLQRRNQKIIEETPAPNLGETTRTKMRQAAESLG--SLLK 890

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 891 YKCAGTVEFIYDE-RRDEFYFLEVNA 915


>gi|314936634|ref|ZP_07843981.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus hominis
           subsp. hominis C80]
 gi|313655253|gb|EFS18998.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus hominis
           subsp. hominis C80]
          Length = 1057

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           LLRK +VP  KG   +S   A    + +  P+ V  S +  G
Sbjct: 673 LLRKIDVPQPKGKTATSPKEALENAREIGYPVVVRPSYVLGG 714


>gi|295097885|emb|CBK86975.1| Acyl-CoA synthetase (NDP forming) [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 887

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 78/250 (31%), Gaps = 34/250 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      +      A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILGSYGMQTLPTWIAGDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              +D +G +    +   V      I+    +T        R++ + V+  A+    +EL
Sbjct: 530 PHKSDVQGVMLYLRTATEVQQAADAIIDRVKMTWPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-------VTSEDVA 171
            + ++          +   +GG++        P++   + + PL         + +    
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLIIQAIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +     L+             +     D  ++  L+I+PL+   N     LD  +    
Sbjct: 638 KIRGRSALRPLDIAGLSQFLVKVSNLIVDCAEIQRLDIHPLLASGN-EFTALDVTLDIAP 696

Query: 231 NALYRHLDIQ 240
               R   + 
Sbjct: 697 FIGDRESRLA 706


>gi|260437894|ref|ZP_05791710.1| phosphoribosylamine--glycine ligase [Butyrivibrio crossotus DSM
           2876]
 gi|292809644|gb|EFF68849.1| phosphoribosylamine--glycine ligase [Butyrivibrio crossotus DSM
           2876]
          Length = 425

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +S   A+  ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYETFTSADDAKKYLETSEYPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + +  +  ++ + E+    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNIKEEALAGVDEL----MLDKKFGDAG---NTIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GNTIKIMSSAQD 212


>gi|224492462|emb|CAR53259.1| putative carbamoylphosphate synthase [Colletotrichum higginsianum]
          Length = 933

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 70/233 (30%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N+P+AK + + ++  A  A + +  P+ V  +    G            
Sbjct: 212 RDLFARALDEINIPIAKSIAVGTIEEALDAAEKVGYPIIVRAAYALGGL----------- 260

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E+   ++ 
Sbjct: 261 ----GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVR 303

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D  +  +          ++E            +++ P   ++ E+          +   L
Sbjct: 304 DANNNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHL 356

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 357 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYXLAYTAAKIGL 408


>gi|308067555|ref|YP_003869160.1| phosphoribosylamine--glycine ligase [Paenibacillus polymyxa E681]
 gi|305856834|gb|ADM68622.1| Phosphoribosylamine--glycine ligase [Paenibacillus polymyxa E681]
          Length = 421

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KY++P A      +   A + +K  P P+ V+K+   A G+              
Sbjct: 107 KDLLHKYHIPTATYRKFYTYEEAHAYLKEQPIPV-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  S++     + +I    ++TK  G  G+    V +E+     +E+ +   VD  +
Sbjct: 152 GVTVAYSMEEAEKALSDI----MVTKVFGEAGA---QVVIEEFL-AGQEMSILSFVDGET 203

Query: 129 GMVAFIA 135
                 A
Sbjct: 204 VRPMAAA 210


>gi|116070931|ref|ZP_01468200.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Synechococcus sp. BL107]
 gi|116066336|gb|EAU72093.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Synechococcus sp. BL107]
          Length = 1106

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + S+   AE+    +     +++     GG G G           
Sbjct: 133 KQAMERIGVSVCPSGIASTQEEAETVGAEIGSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFAAICK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|95930762|ref|ZP_01313495.1| phosphoribosylamine--glycine ligase [Desulfuromonas acetoxidans DSM
           684]
 gi|95133242|gb|EAT14908.1| phosphoribosylamine--glycine ligase [Desulfuromonas acetoxidans DSM
           684]
          Length = 423

 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 79/228 (34%), Gaps = 36/228 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KY +  A     +   AA + I+    P+ VVK    A G+             
Sbjct: 106 SKDLMAKYGIKTAAYESFTDRDAAAAYIRQQGAPI-VVKVDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  ++   I+ + +IL    + K  G  G   + V VE+        + +      
Sbjct: 152 -GVILAQTVDEAIAAVDDIL----VKKTFGDAG---DAVVVEEFLTGEEASFFAFT---D 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML------ELQG 181
              +  +AS+Q    I +  K  P         P   VT      + D +       +  
Sbjct: 201 GKNILPLASSQDHKQIFDGDKG-PNTGGMGAYSPAPVVTDALYQRIVDEVVQPTIDGMAA 259

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +     G LF  L     + D  +LE N      +   + L S++  D
Sbjct: 260 EGCPYCGILFVGL--MIENDDFKVLEFN--ARFGDPECQPLLSRMKSD 303


>gi|329890592|ref|ZP_08268935.1| phosphoribosylamine--glycine ligase [Brevundimonas diminuta ATCC
           11568]
 gi|328845893|gb|EGF95457.1| phosphoribosylamine--glycine ligase [Brevundimonas diminuta ATCC
           11568]
          Length = 425

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA L+++ VP A   V   V +A++A+     P YV+K+   A G+             
Sbjct: 107 SKAFLQRHGVPTAGYGVYEDVASAKTALDQYSAP-YVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV +        ++I  +LG    +          + V +E+  D
Sbjct: 153 -GVAISPDRADAEAEIERMLGGRFGSAG--------SRVVIEEFMD 189


>gi|329117983|ref|ZP_08246696.1| phosphoribosylamine-glycine ligase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465871|gb|EGF12143.1| phosphoribosylamine-glycine ligase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 456

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 26/173 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +   A + +K    P+ V+K+   A G+             
Sbjct: 140 AKAFMQRHGIPTAAYRTFENAGEAHAYVKEKGAPI-VIKADGLAAGK------------- 185

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +     + I ++L    +  + G  G+RV    +ED      E    ++ D  
Sbjct: 186 -GVIVAMNEDEAHAAIDDML----LANKMGEAGARV---VIEDFLQ-GEEASFIVMCDGE 236

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
           + +   +A++Q    + +  K  P         P   VT E    + D + L 
Sbjct: 237 NVLP--MATSQDHKRLLDGDKG-PNTGGMGAYSPAPVVTDEVYRRVMDEIVLP 286


>gi|317122854|ref|YP_004102857.1| carbamoyl-phosphate synthase large subunit [Thermaerobacter
           marianensis DSM 12885]
 gi|315592834|gb|ADU52130.1| carbamoyl-phosphate synthase large subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 1246

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 18/105 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +    G    SV  A +A + +  P+ V  S +  G                 
Sbjct: 799 RLLARLGLQRPPGAAARSVAEALAAAERIGYPVIVRPSYVLGG---------------RA 843

Query: 70  VRVESSLKSVI---SDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           ++V  S + +    +    + G   +       G  +    V DG
Sbjct: 844 MQVARSPEELARYLATAARVAGDRPVWVDRYIAGMELEVDAVADG 888


>gi|300173172|ref|YP_003772338.1| carbamoyl-phosphate synthase pyrimidine-specific large subunit
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299887551|emb|CBL91519.1| Carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Leuconostoc gasicomitatum LMG 18811]
          Length = 1059

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 41/213 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL+ + N P+ +  + +++  A     T   P+ V  +    G             + G
Sbjct: 133 KALMERLNEPIPESTIATTLEEALEFADTHSYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +                 G   S V  V +E      +E+   ++  R +
Sbjct: 180 GI--AETHEELTEIAAN-----------GLELSPVTQVLIERSIAGYKEIEFEVM--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
              A + ++    D   V       I    +    D  + +  +    +   L+++G   
Sbjct: 225 HDNALVVASMENFDP--VGIHTGDSIVTAPVQTLSDREVQMMRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I    L PN YK +       +E+NP +   + 
Sbjct: 283 IQMA-LDPNSYKYYI------IEVNPRVSRSSA 308


>gi|207347550|gb|EDZ73683.1| YBR208Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 834

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIG 797


>gi|195977186|ref|YP_002122430.1| phosphoribosylamine--glycine ligase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195973891|gb|ACG61417.1| phosphoribosylamine--glycine ligase protein PurD [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 434

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 96/279 (34%), Gaps = 47/279 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A     S    A++ I+    P+ VVK+   A G+             
Sbjct: 121 AKQIMVKYGIPTAAYDTFSDFAKAKAYIEEKGVPI-VVKADGLALGK------------- 166

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +   R++L    +  + G +G+RV    +E+          SL     
Sbjct: 167 -GVVVAETVEQAVEAARDML----LDNKFGDSGARV---VIEEFLTGEE---FSLFAFVN 215

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                 + + Q                 K  +D   G  +  + +   +  L        
Sbjct: 216 GDQFYLMPTAQD---------------HKRALDGDKGPNTGGMGAYAPVPHLPQSVVDTA 260

Query: 188 GDLFPN--LYKAFCDKDMSL-LEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
            +      L     +    L +    LI+ ++G ++   +++   D  A      +    
Sbjct: 261 VETIVKPVLKGMMAEGRPYLGILYCGLILTEDGPKVIEFNARFG-DPEAQVILPRLTS-- 317

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMAT 282
           D ++  +  +E    N+++      +G ++   G  +A 
Sbjct: 318 DFAQNITDMLEGNTANITWSDEGVTLGVVLASNGYPLAY 356


>gi|162139108|ref|YP_598311.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS10270]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|50903082|gb|AAT86797.1| Carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS10394]
          Length = 1073

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 683 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 729



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 148 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 183


>gi|173122|gb|AAC41643.1| urea amidolyase [Saccharomyces cerevisiae]
          Length = 1835

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + A+ + +K  VP V   ++I+SV  A+     L  P+ V KS    GG G
Sbjct: 748 HSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMV-KSTAGGGGIG 797


>gi|19748065|gb|AAL97546.1| putative carbamoylphosphate synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 1072

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 682 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 728



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 147 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 182


>gi|332978532|gb|EGK15241.1| phosphoribosylamine-glycine ligase [Psychrobacter sp. 1501(2011)]
          Length = 426

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++  N+P AK    + + AA++ +     P+ VVK+   A G+             
Sbjct: 108 AKEFMQANNIPTAKYEAFTDIEAAKAYVSENGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +++   + I ++LG      + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAETIEQAHTAIEDMLG----DNKFGDAG---SRVVIEQFLQGEEASFICMI 201


>gi|329121329|ref|ZP_08249955.1| phosphoribosylamine-glycine ligase [Dialister micraerophilus DSM
           19965]
 gi|327469738|gb|EGF15204.1| phosphoribosylamine-glycine ligase [Dialister micraerophilus DSM
           19965]
          Length = 415

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 22/120 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + KYN+P AK   ++S    E  IK    P  V+K+     G+             
Sbjct: 104 AKEFMLKYNIPTAKYETVTSKSEGEKVIKHFTYP-LVIKADGLCAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV++  +       ++E+    +        G       +E+  +      L  + D  
Sbjct: 150 -GVKICQNELEAKEYLKELFEEKIF-------GQEGTTAVIEEFLEGKEASLLCFVSDGN 201


>gi|300869897|ref|YP_003784768.1| carbamoyl phosphate synthase large subunit [Brachyspira pilosicoli
           95/1000]
 gi|300687596|gb|ADK30267.1| carbamoyl phosphate synthase large subunit [Brachyspira pilosicoli
           95/1000]
          Length = 1067

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 6/93 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++   +L+  N+P  KG    +V  A      +  P+ V  S +  GGR     + + 
Sbjct: 672 HEFE--EMLKTLNIPQPKGKTAITVDEALVIANKIGYPVLVRPSYVL-GGRAM---EIVY 725

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            D+   + +E+++K V +    ++   ++ K+ 
Sbjct: 726 NDAALKIYMETAVKEVSNKAPILIDKYIVGKEI 758



 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L+   N PV + V++ SV  A      +   L V  +    G
Sbjct: 137 KKLMNDINEPVPESVIVHSVEEAIEFANKIGYHLVVRPAYTLGG 180


>gi|157143828|emb|CAL47327.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 94

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 11/94 (11%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETLFDLMTREPDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKIN 352
           +G ++ I G I     + K   GI+ A +E +  
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFEEYQDK 94


>gi|139473990|ref|YP_001128706.1| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           str. Manfredo]
 gi|167006450|sp|A2RF60|CARB_STRPG RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|134272237|emb|CAM30489.1| carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           str. Manfredo]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|86608391|ref|YP_477153.1| cyanophycin synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556933|gb|ABD01890.1| cyanophycin synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 898

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 14/75 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+   +PV KG  +       + I+ + G   V+K               L A+   
Sbjct: 223 KELLQDMGIPVPKGYTVRRRSELAATIEDVGGFPVVIKP--------------LNANHGK 268

Query: 69  GVRVESSLKSVISDI 83
           G+ V  +        
Sbjct: 269 GITVNITSLEAAEIA 283


>gi|71802385|gb|AAX71738.1| carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS6180]
          Length = 1073

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 683 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 729



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 148 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 183


>gi|56478716|ref|YP_160305.1| biotin carboxylase subunit of unknown acetyl-CoA carboxylase-like
           enzyme [Aromatoleum aromaticum EbN1]
 gi|56314759|emb|CAI09404.1| Biotin carboxylase subunit of unknown acetyl-CoA carboxylase-like
           enzyme [Aromatoleum aromaticum EbN1]
          Length = 451

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ L     VPV+ G    +   A    + +  PL V K+    GGRG           +
Sbjct: 120 ARRLAESVGVPVSPGGPTRTAADALLLARKIGFPLLV-KAAFGGGGRGM-----KQVHDE 173

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G+     L S  +                  G     V++E      + + + +L D  
Sbjct: 174 AGLAAAWELASSEASAS------------FGDG----TVFIERFVQAAKHVEVQILGDAH 217

Query: 128 SGMV 131
              +
Sbjct: 218 GHRI 221


>gi|315444657|ref|YP_004077536.1| carbamoyl-phosphate synthase large subunit [Mycobacterium sp.
           Spyr1]
 gi|315262960|gb|ADT99701.1| carbamoyl-phosphate synthase large subunit [Mycobacterium sp.
           Spyr1]
          Length = 1112

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LR+  +P  +  + +S   A      +  P+ V  S +  GGRG
Sbjct: 694 EVLRRAGLPAPRFGMATSFDQARRIAAEIGYPVLVRPSYVL-GGRG 738


>gi|311067126|ref|YP_003972049.1| phosphoribosylamine--glycine ligase [Bacillus atrophaeus 1942]
 gi|310867643|gb|ADP31118.1| phosphoribosylamine--glycine ligase [Bacillus atrophaeus 1942]
          Length = 422

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+RKY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMRKYQIPTAEYETFTSFDEAKAYVQEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S +  I+ + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAMSEEEAIACLHDFL-------EDEKFGDASASVVIEEFLS-GEEFSLMAFVKGE 202

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 203 TVYPMVIA 210


>gi|303247432|ref|ZP_07333704.1| phosphoribosylamine/glycine ligase [Desulfovibrio fructosovorans
           JJ]
 gi|302491128|gb|EFL51020.1| phosphoribosylamine/glycine ligase [Desulfovibrio fructosovorans
           JJ]
          Length = 426

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A     +   AA + I+ L  P+ VVK+   A G+             
Sbjct: 106 AKEVMAAAGVPTAAYETFTDAKAARAYIEGLGKPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V       ++ + E L    +    G  G++V    V +   +  E       D  
Sbjct: 152 -GVTVAHDPAEALAAVDEAL----VKGVFGQAGAKV----VVEELLVGEEASFLAFCDGK 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 TAVPM 207


>gi|296417048|ref|XP_002838177.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634091|emb|CAZ82368.1| unnamed protein product [Tuber melanosporum]
          Length = 1167

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 71/230 (30%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  +  +P+A+ + ++SV  A  A + +  P+ V  +    G               
Sbjct: 221 AKAL-NEIEIPIAESIAVNSVDEALDAAEKIGYPIIVRSAYALGGL-------------- 265

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    +  + +       L  +               + VE      +E+   ++ D +
Sbjct: 266 -GSGFANDREELHDLSARSLSLS-------------PQILVEKSLKGWKEVEYEVVRDGS 311

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 312 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 364

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 365 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 413


>gi|147678572|ref|YP_001212787.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274669|dbj|BAF60418.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 701

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 30/154 (19%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  + N  G  +   D ++L G   A F                     +DV G A  D
Sbjct: 300 RVAIITNSGGPGIIATDNVELEGLHMARFEKETIEELRANLPGEASIYNPVDVLGDARSD 359

Query: 307 KVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVM-RLEGANV 364
           +   A   +  D +V  +L+ +    +   +   + I+ A ++   + P++     GA +
Sbjct: 360 RYKFALNKVMDDPNVDSVLVLMCPTAVTEAEETSRVIVEA-RDAHPDKPVLAAYTGGAKL 418

Query: 365 DIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
             G  +++ +G+   T        +  V  +KG+
Sbjct: 419 AGGAEILSRAGIPCFTFP------EPAVKCIKGL 446



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 80/227 (35%), Gaps = 38/227 (16%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE- 73
           Y +P A  V+ +S   A    + +  P+ V+K             +       GGV++  
Sbjct: 499 YGIPAAPIVLATSPREAAEVAEKMGFPV-VLKV---------ASPRIQHKTDVGGVKIGL 548

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
           +S + V     EI    + +      G  V  + V+       EL + +  D   G    
Sbjct: 549 NSPEEVEKSFIEI----MESVSHYLPGVPVYGIEVQKMMPRGTELIIGVTKDVQFG--PL 602

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED------VASLCDML--ELQGQARI 185
           IA   GG+        Y   +  +       +  E         +    L    +G+A  
Sbjct: 603 IAFGLGGI--------YVNLLKDVSFGLAQSLFDEQKIEEMIARTKAYSLLKGYRGEAPR 654

Query: 186 DG---GDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           D     D+   + +   D  +++ ++INP+   + G L  LD KI+ 
Sbjct: 655 DFPAVIDVIKRVARLSVDFPEITEMDINPVFAYEKG-LSALDIKITI 700


>gi|87120524|ref|ZP_01076418.1| phosphoribosylamine-glycine ligase [Marinomonas sp. MED121]
 gi|86164167|gb|EAQ65438.1| phosphoribosylamine-glycine ligase [Marinomonas sp. MED121]
          Length = 429

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + IK    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYGNFTQIDEAVAYIKQQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +    I+ + ++L         G  G   + V +E+        ++ ++ D  +
Sbjct: 154 GVILAQTEAEAIAAVEDMLQ----GNSFGDAG---SRVVIEEFLTGEEASFICMV-DGET 205

Query: 129 GMVAFIASTQG 139
            +   +AS+Q 
Sbjct: 206 VLP--LASSQD 214


>gi|222824388|ref|YP_002575962.1| carbamoylphosphate synthase, large subunit [Campylobacter lari
           RM2100]
 gi|222539609|gb|ACM64710.1| carbamoylphosphate synthase, large subunit [Campylobacter lari
           RM2100]
          Length = 1087

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A++ +  PL +  S    G                
Sbjct: 131 KESMKKIGMDLPKSMYAYNYEEALKAVEEIGFPLMIRASFTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ D+  
Sbjct: 176 GSGVVYNMDEFAELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDKND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE V          + I P + +T             
Sbjct: 225 NCIIV-------CSIENVDPMGVHTGDSITIAPALTLTDKEYQAMRNASFA 268


>gi|315609092|ref|ZP_07884061.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella buccae
           ATCC 33574]
 gi|315249162|gb|EFU29182.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella buccae
           ATCC 33574]
          Length = 393

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 58/193 (30%), Gaps = 38/193 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     +      A   +  P  VVK  + + G G+           
Sbjct: 111 AKEL----GLRTAKYFYAKTFDEFRKAADEIGFPC-VVKPLMSSSGHGQSY--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V  +  L+    D  E           G  G  V  + +E+  D   E  L  L    
Sbjct: 157 --VHSDGELEQAFRDAME-----------GSRGD-VKEIIIEEFIDFDSEFTL--LTVTQ 200

Query: 128 SGMVAF----IASTQGGMDIEEVAKDY--PQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
                     I   Q G D  E  + +  P +  K   D    VT  +  + C +  ++ 
Sbjct: 201 KQGPTLFCPPIGHIQKGGDYRESWQPFRLPDEALKAAEDMARKVT--EALTGCGLWGVEF 258

Query: 182 QARIDGGDLFPNL 194
                G  +F  L
Sbjct: 259 FLSRQGEVIFSEL 271


>gi|330921677|ref|XP_003299521.1| hypothetical protein PTT_10529 [Pyrenophora teres f. teres 0-1]
 gi|311326746|gb|EFQ92360.1| hypothetical protein PTT_10529 [Pyrenophora teres f. teres 0-1]
          Length = 1172

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N+P+AK + +S+V  A  A + +  P+ V  +    G            
Sbjct: 213 RDLFARALDEINIPIAKSIAVSTVDEALDAAEKVGYPIIVRAAYALGGL----------- 261

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E    ++ 
Sbjct: 262 ----GSGFANNPEELKNLSARSLTLS-------------PQILVEKSLKGWKEAEYEVVR 304

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDML 177
           D +   +          ++E            +++ P    + E+          +   L
Sbjct: 305 DASDNCITV-------CNMENFDPLGVHTGDSIVVSPSQTFSDEEYHMLRSASIKIVRHL 357

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 358 GVVGECNVQYCLQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 409


>gi|225873939|ref|YP_002755398.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Acidobacterium capsulatum ATCC 51196]
 gi|225792088|gb|ACO32178.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Acidobacterium capsulatum ATCC 51196]
          Length = 390

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 9/147 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  LR + +P+       S  A   A+  L G  ++  ++    GRG+ +          
Sbjct: 110 KNWLRDHGLPLGDYRAAESEQALVDAVTALGGRCFIKSARGGYDGRGQVKIGFG------ 163

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +    +  ++LG   +  +      R   V V          + S L    +
Sbjct: 164 --ELTGTPEEQAREAWKLLGQRPVVAEKAVALEREVSVMVARRPSGETRSFPSALNHHEN 221

Query: 129 GMVAFIASTQG-GMDIEEVAKDYPQKI 154
            ++ +     G    +E+ A++    I
Sbjct: 222 QILVWSVIPSGVPPALEKQAQELASAI 248


>gi|157382758|gb|ABV48816.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 97

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 12/91 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGECSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVLV---KGILSAVKE 348
            +  ++ I G I     +    KGI+ A ++
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFKGIIQAFEK 91


>gi|67925908|ref|ZP_00519191.1| Cytoplasmic peptidoglycan synthetase, N-terminal:ATP-dependent
           carboxylate-amine ligase-like, ATP-grasp:Cytoplasmic
           peptidoglycan synthetases, C-terminal [Crocosphaera
           watsonii WH 8501]
 gi|67852248|gb|EAM47724.1| Cytoplasmic peptidoglycan synthetase, N-terminal:ATP-dependent
           carboxylate-amine ligase-like, ATP-grasp:Cytoplasmic
           peptidoglycan synthetases, C-terminal [Crocosphaera
           watsonii WH 8501]
          Length = 872

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 9/146 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    VPV +G  I      ESAI  + G   V+K      GRG         D++ 
Sbjct: 224 KTILLDAGVPVPRGTTIQFFEELESAIADVGGYPIVIKPLDANHGRGITIDVNSWEDAEE 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              + S      S I E        +     G  V    V +          S++ D   
Sbjct: 284 AYDLASKESKTRSVIVERFYKGSDHRLLVINGKLVA---VAERVPA------SVVGDGQH 334

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKI 154
            +   IA T       E   +   KI
Sbjct: 335 TIEELIAITNEDPRRGEGHDNVLTKI 360


>gi|270159321|ref|ZP_06187977.1| cyanophycin synthetase [Legionella longbeachae D-4968]
 gi|289165857|ref|YP_003455995.1| Cyanophycin synthetase [Legionella longbeachae NSW150]
 gi|269987660|gb|EEZ93915.1| cyanophycin synthetase [Legionella longbeachae D-4968]
 gi|288859030|emb|CBJ12959.1| Cyanophycin synthetase [Legionella longbeachae NSW150]
          Length = 879

 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +P+ +G++I S    + AI  L  P  V+K     G  GKG    +    K 
Sbjct: 221 KQILKANFIPIPEGLMIHSTEELDEAINQLGFP-LVIKP--LNGNHGKGVVTHITDKQKA 277

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTG 97
            +  +       +   +I+    I+ Q  
Sbjct: 278 HIGFKL----AKNISNQIITERFISGQDY 302


>gi|225017616|ref|ZP_03706808.1| hypothetical protein CLOSTMETH_01545 [Clostridium methylpentosum
           DSM 5476]
 gi|224949581|gb|EEG30790.1| hypothetical protein CLOSTMETH_01545 [Clostridium methylpentosum
           DSM 5476]
          Length = 1067

 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G  + +   A  A   L  P+ +  S +  G        +   +    
Sbjct: 670 ELLEKCGIPRPAGTTVFTAEEAVKAANELEYPVLLRPSYVLGGQNMIIAHSDKDIEEYMA 729

Query: 70  VRVESSLKSVISDIREILG 88
           +    ++++ +   + ++G
Sbjct: 730 IITSHNIENPVLVDKYMMG 748


>gi|161484702|ref|NP_607047.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS8232]
 gi|22095490|sp|P58941|CARB_STRP8 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|255636594|gb|ACU18635.1| unknown [Glycine max]
          Length = 431

 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY++P AK    +    A+  I+    P+ V+K+   A G+              
Sbjct: 145 KHLCDKYDIPTAKYKTFTDPSTAKQYIQEQGAPI-VIKADGLAAGK-------------- 189

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L+     +  +L    +    G  G RV    VE+  +     + +L+
Sbjct: 190 GVTVAMTLEEANEAVDSML----VKGDFGSAGCRV---IVEEFLEGEEASFFALV 237


>gi|167629522|ref|YP_001680021.1| carbamoyl-phosphate synthase, large subunit [Heliobacterium
           modesticaldum Ice1]
 gi|167592262|gb|ABZ84010.1| carbamoyl-phosphate synthase, large subunit [Heliobacterium
           modesticaldum Ice1]
          Length = 1084

 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 12/104 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL++  +P ++G   +S   A++  + L  P+ V  S +  GGR               
Sbjct: 672 ALLKRLGIPQSEGRSATSADEAKAIAEELGFPVLVRPSYV-IGGRAM-----------EV 719

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           V     L S +     I     I       G  V    + DG D
Sbjct: 720 VENVKDLASYMETAVRISPKHPILVDKYIRGREVEVDAISDGND 763


>gi|15674870|ref|NP_269044.1| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           M1 GAS]
 gi|71910456|ref|YP_282006.1| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS5005]
 gi|22095524|sp|Q9A0C6|CARB_STRP1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|13622006|gb|AAK33765.1| putative carbamoylphosphate synthetase [Streptococcus pyogenes M1
           GAS]
 gi|71853238|gb|AAZ51261.1| carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS5005]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|239978398|ref|ZP_04700922.1| carbamoyl phosphate synthase large subunit [Streptomyces albus
           J1074]
 gi|291450295|ref|ZP_06589685.1| carbamoyl-phosphate synthase subunit large [Streptomyces albus
           J1074]
 gi|291353244|gb|EFE80146.1| carbamoyl-phosphate synthase subunit large [Streptomyces albus
           J1074]
          Length = 1101

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFDEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|209559197|ref|YP_002285669.1| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           NZ131]
 gi|226700940|sp|B5XKW2|CARB_STRPZ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|209540398|gb|ACI60974.1| Carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           NZ131]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|254418063|ref|ZP_05031787.1| phosphoribosylamine--glycine ligase [Brevundimonas sp. BAL3]
 gi|196184240|gb|EDX79216.1| phosphoribosylamine--glycine ligase [Brevundimonas sp. BAL3]
          Length = 424

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 23/106 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA L ++ +P A   V  +V  A++A+     P YV+K+   A G+             
Sbjct: 106 SKAFLERHEIPTAGYGVYDTVKDAKAALDVFK-PPYVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV +        ++I  +LG        G  G+RV    +E+  D
Sbjct: 152 -GVAISPDRADAEAEIERMLGGRF-----GAAGARV---VIEEFMD 188


>gi|162139406|ref|YP_280093.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS6180]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|94547637|gb|ABF37683.1| Carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS10750]
          Length = 1073

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 683 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 729



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 148 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 183


>gi|161761316|ref|YP_059980.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS10394]
 gi|60389500|sp|Q5XCR6|CARB_STRP6 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|37525239|ref|NP_928583.1| hypothetical protein plu1272 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784666|emb|CAE13566.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 880

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 79/223 (35%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      +  +   A +  + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLNTLPTWIAHNSDEAVNIAQQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V +  + I+       Q  P  +R+  + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRNANEVKASAQAIIERV---NQNFPH-ARIQGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++  +   +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDEVFGPLIMLG--EGGIEWSQ---ETQAAVALPPLNMALARYLVIQAIKSRKIK 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
                Q    +    L   +     D   +  L+I+PL+   +
Sbjct: 641 LRGAPQSLDVLALSRLLVQVSNLLLDCPQIVRLDIHPLLASGD 683


>gi|145224325|ref|YP_001135003.1| carbamoyl phosphate synthase large subunit [Mycobacterium gilvum
           PYR-GCK]
 gi|189081830|sp|A4TBY6|CARB_MYCGI RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|145216811|gb|ABP46215.1| carbamoyl-phosphate synthase large subunit [Mycobacterium gilvum
           PYR-GCK]
          Length = 1112

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LR+  +P  +  + +S   A      +  P+ V  S +  GGRG
Sbjct: 694 EVLRRAGLPAPRFGMATSFDQARRIAAEIGYPVLVRPSYVL-GGRG 738


>gi|186685868|ref|YP_001869064.1| cyanophycin synthetase [Nostoc punctiforme PCC 73102]
 gi|186468320|gb|ACC84121.1| cyanophycin synthetase [Nostoc punctiforme PCC 73102]
          Length = 901

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L     PV +G VI+ +   E AI+ + G   VVK      GRG
Sbjct: 224 KRILAAAGAPVPRGTVINFLDDLEQAIEYVGGYPIVVKPLDGNHGRG 270


>gi|162139084|ref|YP_596431.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS9429]
 gi|162139133|ref|YP_600307.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS2096]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|94541838|gb|ABF31887.1| carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS9429]
 gi|94545716|gb|ABF35763.1| Carbamoyl-phosphate synthase large chain [Streptococcus pyogenes
           MGAS2096]
          Length = 1073

 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 683 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 729



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 148 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 183


>gi|261414467|ref|YP_003248150.1| D-alanine/D-alanine ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261370923|gb|ACX73668.1| D-alanine/D-alanine ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327372|gb|ADL26573.1| D-alanyl D-alanine ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 344

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 22/108 (20%)

Query: 8   AKALLRKYNVPVAKGVVI----SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +K + R   +P     VI     +     S    L  PL +               K+  
Sbjct: 136 SKEIYRANGIPTPPYRVIWKHDFTGDTLVSVADELGYPLVI---------------KDPL 180

Query: 64  ADSKGGVRVESSLKSVISDIREILG--STLITKQTGPTGSRVNCVYVE 109
             S  G+ +  +L       +++    + L+ ++    G   +C Y+E
Sbjct: 181 GGSSIGIGIAKNLDEAGKIAQDLFKDSNRLLCEKFIAGGE-ASCGYIE 227


>gi|239927752|ref|ZP_04684705.1| hypothetical protein SghaA1_05964 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436092|ref|ZP_06575482.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291338987|gb|EFE65943.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 714

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 72/220 (32%), Gaps = 23/220 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    + + V  A +      G + +             +        
Sbjct: 28  EGKVIADAYGIAVPGEELATDVEEAVACAARFGGSVVM-------------KIVSPDILH 74

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           K             +D+R      +   +     +R+  V V++     +E+ +  + D 
Sbjct: 75  KTDAGGVVVGVEGAADVRAAFCRIVENARAYDADARIEGVQVQELLPKGQEVIVGAVTDP 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQ 182
           T G V       GG+ +E +     +      +D    V+  D     ++L      +G 
Sbjct: 135 TFGKVVAFG--LGGVLVEVLKDVTFRLA---PVDADEAVSMLDSIRAAEVLRGVRGQEGV 189

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
            R    +    + +   D  +++ +++NP+I    G +  
Sbjct: 190 DRWAVAEQIRRVSELVTDFPEIAEVDLNPVIATAGGAVAA 229



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG----ILSAV 346
           GA  N +D+ GG       A  ++   D  +  +++  +  I+   ++       +++  
Sbjct: 593 GAAGNPVDITGGEPPSTYEATIRLGLEDPRIHALVLGYWHTIVTPPMVFAELTARVVAEF 652

Query: 347 KEVKINIPLVMRLEG-ANVDIGNRLIAESGLNVITAID 383
           +E  I+ P+V  L G   V+   R + E G+       
Sbjct: 653 RERGISKPVVASLAGDVEVEEACRYLFERGVVAYPYTT 690


>gi|294892387|ref|XP_002774038.1| amidophosphoribosyltransferase, putative [Perkinsus marinus ATCC
           50983]
 gi|239879242|gb|EER05854.1| amidophosphoribosyltransferase, putative [Perkinsus marinus ATCC
           50983]
          Length = 864

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 17/83 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R++++P A+ V  +++   E A++ +    G   VVK+   A G+          
Sbjct: 755 AKGFMRRHDIPTAEFVTATTLEEGEKAVEKICSSDGGGVVVKASGLAAGK---------- 804

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
               GV V  +++     +REI 
Sbjct: 805 ----GVIVVDTVEQGKEALREIF 823


>gi|255714541|ref|XP_002553552.1| KLTH0E01452p [Lachancea thermotolerans]
 gi|238934934|emb|CAR23115.1| KLTH0E01452p [Lachancea thermotolerans]
          Length = 1121

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 63/221 (28%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P A+     +V  A SA   +  P+ V  +    G                G  
Sbjct: 160 LKEINIPTAESFACETVDEALSAAARVQYPVIVRSAYALGGL---------------GSG 204

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++   +     + L  +               + VE      +E+   ++ DR    +
Sbjct: 205 FANNEGEMKELAAQALSLS-------------PQILVEKSLKGWKEVEYEVVRDRVGNCI 251

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            ++  P   ++ E+          +   L + G+  
Sbjct: 252 TV-------CNMENFDPLGVHTGDSIVFAPSQTLSDEEFHMLRTAAIKIIRHLGVVGECN 304

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L Y+   + +  L   + L     G      +
Sbjct: 305 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTA 344


>gi|222099085|ref|YP_002533653.1| Carbamoyl-phosphate synthase large chain [Thermotoga neapolitana
           DSM 4359]
 gi|254813665|sp|B9KB91|CARB_THENN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|221571475|gb|ACM22287.1| Carbamoyl-phosphate synthase large chain [Thermotoga neapolitana
           DSM 4359]
          Length = 1099

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 15/76 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++  +        SSV  A    + L  P+ V  S +  G                 
Sbjct: 667 KLLKRIGLRCPPFGTASSVEEALKVAEDLGYPVLVRPSYVLGG---------------RA 711

Query: 70  VRVESSLKSVISDIRE 85
           + +  + + +   +RE
Sbjct: 712 MAIVDTPEELERYVRE 727



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 54/173 (31%), Gaps = 37/173 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      + V +  +++++  A    +    P+ +  S    G            
Sbjct: 129 RELFKKTMEEAGLEVLRSRLVNNLTDALETAREFGYPVIIRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    + + +   + + L  +            V+ V +E+     +E  L ++ 
Sbjct: 177 -TGGGV--AFNEEELREIVTKGLIES-----------PVHTVLIEESVIGWKEYELEVVR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           D     +           IE +          + + P   +T  +   + D  
Sbjct: 223 DGAGNFIVV-------CSIENLDPMGIHTGDSITVAPSQTLTDVEYQRMRDAA 268


>gi|306827566|ref|ZP_07460847.1| carbamoyl-phosphate synthase, large subunit [Streptococcus pyogenes
           ATCC 10782]
 gi|304430218|gb|EFM33246.1| carbamoyl-phosphate synthase, large subunit [Streptococcus pyogenes
           ATCC 10782]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|189203165|ref|XP_001937918.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985017|gb|EDU50505.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1171

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N+P+AK + +S+V  A  A + +  P+ V  +    G            
Sbjct: 212 RDLFARALDEINIPIAKSIAVSTVDEALDAAEKVGYPIIVRAAYALGGL----------- 260

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E    ++ 
Sbjct: 261 ----GSGFANNPEELKNLSARSLTLS-------------PQILVEKSLKGWKEAEYEVVR 303

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDML 177
           D +   +          ++E            +++ P    + E+          +   L
Sbjct: 304 DASDNCITV-------CNMENFDPLGVHTGDSIVVSPSQTFSDEEYHMLRSASIKIVRHL 356

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 357 GVVGECNVQYCLQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 408


>gi|157143822|emb|CAL47324.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 92

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG  + +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVEDLANYGEYSGGPTESETQFYAETIFDLMTRYEDERG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKE 348
            ++ I G I     + K   GI+ A+ +
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIIKALDK 88


>gi|21904290|gb|AAM79169.1| putative carbamoylphosphate synthetase [Streptococcus pyogenes
           MGAS315]
          Length = 1048

 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 658 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 704



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 123 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 158


>gi|291531319|emb|CBK96904.1| phosphoribosylamine--glycine ligase [Eubacterium siraeum 70/3]
          Length = 426

 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL++KYN+P A     +    A + IK       V+K    A G+             
Sbjct: 106 SKALMKKYNIPTAAYETFTDADEAIAYIKKQNSFPAVIKCDGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +    +   + +R +L         G  G   + + VE+      E+ +    D  
Sbjct: 153 -GVIIAKDEQEAENAVRSML-------LDGKFGKSGSEIVVEEFMT-GPEVTVLAFTDGK 203

Query: 128 SGMVAF 133
           +     
Sbjct: 204 TVKPMI 209


>gi|290955611|ref|YP_003486793.1| CoA-binding protein [Streptomyces scabiei 87.22]
 gi|260645137|emb|CBG68223.1| putative CoA-binding protein [Streptomyces scabiei 87.22]
          Length = 857

 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 73/239 (30%), Gaps = 30/239 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL--YVVKSQIHAGG-RGKGRFKELPADS 66
            LL  Y +P        +  AA  A   L GP    V+K+       + +     L   +
Sbjct: 641 DLLTCYGIPQIPWAWAETEDAAVLAADRLRGPDGRVVMKAHWPGLVHKTEQHAVHLDLQN 700

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              VR                            G+ ++ V V+  A    EL+  ++ D 
Sbjct: 701 DSQVRAAFRDFETR------------------FGALLDGVVVQPLAPRGTELFAGVVQDE 742

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
             G +       GG   E +     +      +D    +T+   A L             
Sbjct: 743 VFGPLVLFG--LGGTATEVLGDHAARLAPLTGLDVHDLITAPRCAPLLFGARGSGPVDLE 800

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELR 243
               L   L +   D   ++  + NP++    G + VLD+++      L R      LR
Sbjct: 801 RLERLLQGLSRMAADLPQLTEADFNPVLATSAG-VSVLDARVRL----LPRRPQDPYLR 854


>gi|324503671|gb|ADY41590.1| Trifunctional purine biosynthetic protein adenosine-3 [Ascaris
           suum]
          Length = 969

 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+ ++   +P A+    ++++ A   I+ +     VVK+   A G+             
Sbjct: 103 AKSFMKSVGIPSAEYRTFTNINDATRFIEEISWDGIVVKASGLAAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  S +  I   +E+L            G   N + +E+  
Sbjct: 150 -GVVVAESREEAIIAAKEMLQGKF--------GEASNEIIIEEML 185


>gi|297571589|ref|YP_003697363.1| carbamoyl-phosphate synthase, large subunit [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296931936|gb|ADH92744.1| carbamoyl-phosphate synthase, large subunit [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 1063

 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 53/189 (28%), Gaps = 40/189 (21%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L      PV    +  +V  A +A + +  P+                 +      
Sbjct: 131 QFKQLCESIGEPVIASDIAYTVEEALAAAERIGYPVV---------------LRPAFTLG 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G     S + +   +   L  +            V+ V +E      +E+   ++ D 
Sbjct: 176 GTGGGFAHSPEELTEMMVNALHLS-----------PVHQVLIEKSIVGYKEIEFEVMRDA 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLEL 179
           +   +           +E +          +++ P + +   D          L   L++
Sbjct: 225 SDHTICI-------CSMENIDPVGVHTGDSVVVAPALSLNESDLEMLKQSAFKLIRSLKI 277

Query: 180 QGQARIDGG 188
           +G   +   
Sbjct: 278 EGGCNVQFA 286


>gi|161485749|ref|NP_664366.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS315]
 gi|25452822|sp|Q8K7Y3|CARB_STRP3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|317970260|ref|ZP_07971650.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           CB0205]
          Length = 1097

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 54/172 (31%), Gaps = 36/172 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      V V    + +++  AE+    +     +++     GG G G       
Sbjct: 129 RDLFKRAMGRIGVGVCPSGIATTLEEAEAVGDQIGSYPRIIRPAFTLGGSGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +   +     L ++            VN + +E      +E  L ++ 
Sbjct: 182 -------IAYNPEEFRAICLSGLDAS-----------PVNQILIEQSLLGWKEFELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           D  +  V  + S      IE +          + + P   +T  +   L D 
Sbjct: 224 DT-ADNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|291558103|emb|CBL35220.1| phosphoribosylamine--glycine ligase [Eubacterium siraeum V10Sc8a]
          Length = 426

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL++KYN+P A     +    A + IK       V+K    A G+             
Sbjct: 106 SKALMKKYNIPTAAYETFTDADEAIAYIKKQNSFPAVIKCDGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +    +   + +R +L         G  G   + + VE+      E+ +    D  
Sbjct: 153 -GVIIAKDEQEAENAVRSML-------LDGKFGKSGSEIVVEEFMT-GPEVTVLAFTDGK 203

Query: 128 SGMVAF 133
           +     
Sbjct: 204 TVKPMI 209


>gi|257898748|ref|ZP_05678401.1| phosphoribosylglycinamide synthetase [Enterococcus faecium Com15]
 gi|293571969|ref|ZP_06682983.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E980]
 gi|257836660|gb|EEV61734.1| phosphoribosylglycinamide synthetase [Enterococcus faecium Com15]
 gi|291607987|gb|EFF37295.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E980]
          Length = 424

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMETYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G+    + VE+         L+ + D  
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GNSSKKIVVEEFLAGEEFSLLAFVRDTK 204

Query: 128 SGMVAF 133
              +  
Sbjct: 205 VYPMVI 210


>gi|168186112|ref|ZP_02620747.1| carbamoyl-phosphate synthase, large subunit [Clostridium botulinum
           C str. Eklund]
 gi|169295903|gb|EDS78036.1| carbamoyl-phosphate synthase, large subunit [Clostridium botulinum
           C str. Eklund]
          Length = 1063

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 70/202 (34%), Gaps = 37/202 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL + N+    G  ++S+  A   ++ L  P+ V  S +  GGR      +  A    
Sbjct: 671 RELLEELNIKTPTGNAVTSIEEAHKVVEKLGYPVIVRPSYV-IGGRAMEVIYDDKA---- 725

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +E  +K  +S   E      I       G+ +    + DG DIL             
Sbjct: 726 ---LEKYMKEAVSLSSE----HTIIVDKYVRGTEIEVDAICDGEDIL------------- 765

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
            M   +        IE         I    + P + ++ + +  L    +    A    G
Sbjct: 766 -MPGIM------EHIERTGVHSGDSI---TVYPYMTLSEDTIKELVKNTKKIATALKIVG 815

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               N+   F  KD+ ++E+NP
Sbjct: 816 --LVNIQYVFDGKDIYVIEVNP 835


>gi|162139185|ref|YP_602227.2| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           MGAS10750]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|41353045|gb|AAS01144.1| AclB [uncultured prokaryote]
          Length = 97

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 11/96 (11%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + I        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETIFDLMTREPDPQG 60

Query: 322 KGILINIFGGIMRCDVLV---KGILSAVKEVKINIP 354
           +G ++ I G I     +     GI+ A +  +  + 
Sbjct: 61  RGKVLIIGGAIANFTDVAXTFTGIIQAFENYQDKLK 96


>gi|28896204|ref|NP_802554.1| carbamoyl phosphate synthase large subunit [Streptococcus pyogenes
           SSI-1]
 gi|28811455|dbj|BAC64387.1| putative carbamoylphosphate synthetase [Streptococcus pyogenes
           SSI-1]
          Length = 1058

 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALEAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|309361085|emb|CAP30157.2| hypothetical protein CBG_10863 [Caenorhabditis briggsae AF16]
          Length = 1019

 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 24/108 (22%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++Y +P A  V     +V + +S  + +P    VVK+   A G+           
Sbjct: 118 SKQFMKEYGLPTADFVTVSADNVKSLDSVFERVPWKKSVVKADGLAAGK----------- 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +    +   +  R IL       + G  G  V    +E+  +
Sbjct: 167 ---GVIIPKDNEEAKNAARSIL-----EGEFGSAGHTV---IIEERLE 203


>gi|167751395|ref|ZP_02423522.1| hypothetical protein EUBSIR_02386 [Eubacterium siraeum DSM 15702]
 gi|167655641|gb|EDR99770.1| hypothetical protein EUBSIR_02386 [Eubacterium siraeum DSM 15702]
          Length = 439

 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL++KYN+P A     +    A + IK       V+K    A G+             
Sbjct: 119 SKALMKKYNIPTAAYETFTDADEAIAYIKKQNSFPAVIKCDGLALGK------------- 165

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +    +   + +R +L         G  G   + + VE+      E+ +    D  
Sbjct: 166 -GVIIAKDEQEAENAVRSML-------LDGKFGKSGSEIVVEEFMT-GPEVTVLAFTDGK 216

Query: 128 SGMVAF 133
           +     
Sbjct: 217 TVKPMI 222


>gi|21224882|ref|NP_630661.1| hypothetical protein SCO6582 [Streptomyces coelicolor A3(2)]
 gi|3288603|emb|CAA19775.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 714

 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 23/220 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K L   Y + V    +   V  A +      GP+ +             +        
Sbjct: 28  EGKVLADAYGIAVPGEELARDVDEAVACAARFGGPVVM-------------KIVSPDILH 74

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           K             +D+R      +   +     +R+  V +++     +E+ +  + D 
Sbjct: 75  KTDAGGVVVGVEGAADVRAAFCRIVDNARAYDASARIEGVQIQELLPQGQEVIVGAVTDP 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQ 182
           T G V       GG+ +E +     +      +D    ++  D     ++L       G 
Sbjct: 135 TFGKVVAFG--LGGVLVEVLKDVTFRLA---PVDADEALSMLDSIRAAEVLRGVRGQAGV 189

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
            R    +    + +   D  +++ +++NP+I    G +  
Sbjct: 190 DRWAVAEQIRRVSELVADFPEIAEVDLNPVIATPEGAVAA 229


>gi|268609556|ref|ZP_06143283.1| phosphoribosylamine--glycine ligase [Ruminococcus flavefaciens
           FD-1]
          Length = 428

 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A   V +    A + +K       V+K+   A G+             
Sbjct: 107 SKELMKKYNIPTAFYEVFTESDKAIAYLKEQNSYPAVIKADGLALGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +  +  + +++            G     + +E+  
Sbjct: 154 -GVIIAQNEEEAVKAVHDMIDELKF-------GKSSARIVIEEFL 190


>gi|24379735|ref|NP_721690.1| hypothetical protein SMU.1321c [Streptococcus mutans UA159]
 gi|24377696|gb|AAN58996.1|AE014966_6 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 392

 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K + RK  + VA+G V +S   A +  K L  P+ +
Sbjct: 121 KEIFRKTGIKVARGRVFTSTEDARALTKELGFPVII 156


>gi|51701329|sp|Q75D66|CARB_ASHGO RecName: Full=Carbamoyl-phosphate synthase arginine-specific large
           chain; AltName: Full=Arginine-specific
           carbamoyl-phosphate synthetase, ammonia chain
          Length = 1113

 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ V  S+V  A +A   +  P+ V  +    G                G  
Sbjct: 157 LKEINMPIAESVACSTVEDAVAAANDIGYPVIVRSAYALGGL---------------GSG 201

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
                  +     + L  +               V VE      +E+   ++ DR    +
Sbjct: 202 FADDDLQLRQLCAQSLALS-------------PQVLVEKSLKGWKEIEYEVVRDRVGNCI 248

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 249 TV-------CNMENFDPLGIHTGDSIVLAPSQTLSDEEFHMLRTAAIEIIRHLGVVGECN 301

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 302 VQYALQPDGLAFKVIEVNARLSRSSALASKATGYPLAYTA 341


>gi|302306740|ref|NP_983105.2| ABR157Wp [Ashbya gossypii ATCC 10895]
 gi|299788663|gb|AAS50929.2| ABR157Wp [Ashbya gossypii ATCC 10895]
          Length = 1113

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P+A+ V  S+V  A +A   +  P+ V  +    G                G  
Sbjct: 157 LKEINMPIAESVACSTVEDAVAAANDIGYPVIVRSAYALGGL---------------GSG 201

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
                  +     + L  +               V VE      +E+   ++ DR    +
Sbjct: 202 FADDDLQLRQLCAQSLALS-------------PQVLVEKSLKGWKEIEYEVVRDRVGNCI 248

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 249 TV-------CNMENFDPLGIHTGDSIVLAPSQTLSDEEFHMLRTAAIEIIRHLGVVGECN 301

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 302 VQYALQPDGLAFKVIEVNARLSRSSALASKATGYPLAYTA 341


>gi|256005655|ref|ZP_05430613.1| cyanophycin synthetase [Clostridium thermocellum DSM 2360]
 gi|255990413|gb|EEU00537.1| cyanophycin synthetase [Clostridium thermocellum DSM 2360]
          Length = 824

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 13/110 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LL +  +PV  G    S   A    + +  P+ V+K         +G+   L    +
Sbjct: 160 AKRLLAENKIPVPDGDTAYSFEGALQIAREIGFPV-VIKPV----DSNQGKGVTLNIKDE 214

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
             + +  +             S ++  +    G     + V D    + E
Sbjct: 215 QEMEIAYN--EARKY------SRVVLVEKYVKGKDYRVLVVGDRVAAVAE 256


>gi|217969921|ref|YP_002355155.1| CoA-binding protein [Thauera sp. MZ1T]
 gi|217507248|gb|ACK54259.1| CoA-binding domain protein [Thauera sp. MZ1T]
          Length = 886

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 28/229 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KALLR + +PV    V      A    +    P+  +K                    
Sbjct: 487 ESKALLRSFGIPVTHTTVARDATEALFVAEQAGFPV-AMKVDAPEL---------ASKSE 536

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGVR+  +    +          +   +      ++N V +E      +     + V R
Sbjct: 537 SGGVRLNLNTAESVWSA---FHDIVDAVRLRHPEVQINGVSIEPYLYRPQARAFRIQVHR 593

Query: 127 TS-GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP--LIGVTSEDVASLCDMLELQGQA 183
            +          Q        A           ++P     +    + +       QG A
Sbjct: 594 DAIFGPVISLGAQDASAPRTFALP--------PLNPVLARDLIDSAIPAAAQGPRSQGGA 645

Query: 184 RIDGG--DLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
                   +  ++    C+   +  L I+PL I  +G +   D+++  D
Sbjct: 646 LNRAAIEQVLVSVSDLVCELPWVRELAIDPLFIDGDGAI-AADARVVID 693


>gi|120435429|ref|YP_861115.1| carbamoyl-phosphate synthase large subunit [Gramella forsetii
           KT0803]
 gi|117577579|emb|CAL66048.1| carbamoyl-phosphate synthase large subunit [Gramella forsetii
           KT0803]
          Length = 950

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 15/81 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ ++P     V  +   A +    L  P+ V  S +  G                G
Sbjct: 689 KLLQENDIPYPDFGVAENADEALALADELDFPILVRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDIREILGST 90
           +++  +   +   + ++L   
Sbjct: 734 MKIVINKDELEEHVVDLLRKI 754



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + NVPVA    ++S    +   +    PL +  S    GG              G
Sbjct: 134 KQLMGRINVPVAPAKTVTSYLQGKEVAQEFGFPLVIRASFTLGGG------------GAG 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            V               +L         G   S ++ V ++      +E  L LL DR  
Sbjct: 182 FVHRAEDFDE-------ML-------TRGLEASPIHEVLIDKALLGWKEYELELLRDRND 227

Query: 129 GMVAFIASTQGGMDI 143
                I      MD 
Sbjct: 228 N--VVIICAIENMDP 240


>gi|297380116|gb|ADI35003.1| carbamoyl-phosphate synthase, large subunit [Helicobacter pylori
           v225d]
          Length = 1085

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 34/170 (20%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + KG    S   A  AI  +  P  +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  +++     ++  L ++            +N + +E+     +E  + ++  
Sbjct: 175 --GGSGVAYNIEEFQELVKNALDAS-----------PINEILIEESLLGWKEYEMEVI-- 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           R +     I        IE +          + I P + +T ++   + D
Sbjct: 220 RDNKDNCIIVCC-----IENIDPMGVHTGDSITIAPSLTLTDKEYQRMRD 264


>gi|222529530|ref|YP_002573412.1| carbamoyl-phosphate synthase large subunit [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456377|gb|ACM60639.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 1077

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P   G    S+  A    + +  P+ V  S +  G                 +
Sbjct: 677 LLKNLNIPYPPGGAAYSLEDAVKVAQQIGYPVLVRPSYVLGG---------------RAM 721

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            +  S + +   I+   EI     I       G       + DG D+
Sbjct: 722 EIVYSREELEKYIKAAIEISIKHPILIDKYILGKEAEVDGISDGEDV 768



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 30/129 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKKTMIEIGEPVPKSIIAHSVQEAIEFAREVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEELRYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVMR 222

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 223 DSNDNCITV 231


>gi|163815132|ref|ZP_02206513.1| hypothetical protein COPEUT_01288 [Coprococcus eutactus ATCC 27759]
 gi|158449541|gb|EDP26536.1| hypothetical protein COPEUT_01288 [Coprococcus eutactus ATCC 27759]
          Length = 1068

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 36/108 (33%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A  A   L  P+ V  S +  G                G
Sbjct: 676 EILEKCCIPRPAGKTVFTREQALEAANELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIREILGST---LITKQTGPTGSRVNCVYVEDGADI 114
           +++  S K +I  +  I   T    I       G  V    V DG DI
Sbjct: 721 MQIAISDKDIIEFMDIINRHTQEHPILVDKYIMGKEVEVDAVCDGDDI 768


>gi|33592973|ref|NP_880617.1| putative pimeloyl-CoA synthetase [Bordetella pertussis Tohama I]
 gi|33572621|emb|CAE42215.1| putative pimeloyl-CoA synthetase [Bordetella pertussis Tohama I]
 gi|332382385|gb|AEE67232.1| putative pimeloyl-CoA synthetase [Bordetella pertussis CS]
          Length = 706

 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 65/222 (29%), Gaps = 32/222 (14%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  A   +     +  SA+ +LPGP  V         + +     L    +   R    
Sbjct: 508 GIRTAPWRLCLDADSMGSALGSLPGPWAVKACSAQIPHKSEYGLVHLGIADEQRARALFP 567

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           +       +E+LG           G   + V V       RE  +    D   G +  + 
Sbjct: 568 V-----LRQEVLGM----------GKSFDGVIVASMVKPRREFMIGARWDSQFGCIVIVG 612

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
                 D  +  +  P     +   P     +E+      +  L    R +       L 
Sbjct: 613 ------DGGKYVEAMPDVATLVY--PFDQAHAEECLRKLRVAALFDGVRGENPLPVQELA 664

Query: 196 KAFCDKDMSL---------LEINPLIIMKNGRLRVLDSKISF 228
            A       L         ++INPLI   +GRL   D+ +  
Sbjct: 665 HAATRLGAWLHAQQGAVASVDINPLIAGPDGRLYAADALVEI 706


>gi|260591002|ref|ZP_05856460.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella veroralis
           F0319]
 gi|260536867|gb|EEX19484.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella veroralis
           F0319]
          Length = 394

 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 33/165 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ L     +  AK     +    ++A   +  P  VVK  + + G G+           
Sbjct: 111 AREL----GLRTAKYFYAKTYEEFKTAADEIGFPC-VVKPLMSSSGHGQSY--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V  ++ L+    +  E           G  G  V  V +E+  D   E  L  L    
Sbjct: 157 --VHNDAELEEAFKNAME-----------GARGD-VKEVIIEEFIDFDSEFTL--LTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
                      G +   +   DY +      I       +E +A 
Sbjct: 201 KNGPTLFCPPIGHI---QKGGDYRESWQPYAISEDALRQAEHIAK 242


>gi|290580267|ref|YP_003484659.1| hypothetical protein SmuNN2025_0741 [Streptococcus mutans NN2025]
 gi|254997166|dbj|BAH87767.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 384

 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K + RK  + VA+G V +S   A +  K L  P+ +
Sbjct: 113 KEIFRKTGIKVARGRVFTSTEDARALTKELGFPVII 148


>gi|158321131|ref|YP_001513638.1| cyanophycin synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141330|gb|ABW19642.1| cyanophycin synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 882

 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR + VPV +G + +++      ++ L  P  VVK   + G +GKG    L   +K  
Sbjct: 220 RILRNHGVPVPEGRISNTLEEVFEIVERLK-PPIVVKP--YNGNQGKG--VSLNLYTKEE 274

Query: 70  VRVESSLKSVISDIREILGSTLITKQTG 97
           +     +        ++L    I  +  
Sbjct: 275 IIRAFHI--AKQFSDKVLIEKFIEGKHY 300


>gi|145594399|ref|YP_001158696.1| carbamoyl-phosphate synthase, large subunit [Salinispora tropica
           CNB-440]
 gi|145303736|gb|ABP54318.1| carbamoyl-phosphate synthase large subunit [Salinispora tropica
           CNB-440]
          Length = 1115

 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 42/176 (23%)

Query: 9   KALLRKYNVP---------VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           K ++ K  V          V +  V  S+      +  L  P  +         R     
Sbjct: 133 KDIVAKAGVRIGVEDPATLVPRSRVCHSMDEVRETVAELGLPAVI---------RPSFTM 183

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +       +  +   +       L ++            V+ V +E+     +E  
Sbjct: 184 GGLGSG------MAHTDADLERIAGAGLAAS-----------PVHEVLIEESVLGWKEYE 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           L L+ DR   +V           IE V          + + P + +T  +   L D
Sbjct: 227 LELMRDRHDNVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQRLRD 275



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ALL +  +         S   A++    +  P+ V  S +  GGRG
Sbjct: 697 ALLARAGLRAPAHGTAISYDEAKTIAAEIGYPVLVRPSYVL-GGRG 741


>gi|160878699|ref|YP_001557667.1| carbamoyl phosphate synthase large subunit [Clostridium
           phytofermentans ISDg]
 gi|189081828|sp|A9KI94|CARB_CLOPH RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|160427365|gb|ABX40928.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           phytofermentans ISDg]
          Length = 1066

 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 20/109 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A  A   L  P+ V  S +  G                G
Sbjct: 674 EILEKCCIPRPAGKTVFTTEEAIVAANQLGYPVLVRPSYVLGG---------------AG 718

Query: 70  VRVESSLKSVISDIREILGSTLITK----QTGPTGSRVNCVYVEDGADI 114
           +++      V   + EI+   +            G  V    V DG DI
Sbjct: 719 MQIAICDDDVREFM-EIINRNVQEHPILVDKYLMGKEVEVDAVCDGEDI 766


>gi|78484783|ref|YP_390708.1| phosphoribosylamine--glycine ligase [Thiomicrospira crunogena
           XCL-2]
 gi|78363069|gb|ABB41034.1| phosphoribosylamine--glycine ligase [Thiomicrospira crunogena
           XCL-2]
          Length = 430

 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L K+N+P A   V + +  A + I+ +  P+ V+K+   A G+             
Sbjct: 108 SKDFLAKHNIPTAAYSVFTEIPPAVAYIEKMGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV--NCVYV-EDGADI 114
            GV +  +    I+ + ++L       + G  G+RV      V E+ + I
Sbjct: 154 -GVILAETNAEAIAAVEDMLA----GNKFGDAGARVVIEEFLVGEEASFI 198


>gi|295094928|emb|CBK84019.1| carbamoyl-phosphate synthase, large subunit [Coprococcus sp.
           ART55/1]
          Length = 1068

 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 36/108 (33%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A  A   L  P+ V  S +  G                G
Sbjct: 676 EILEKCCIPRPAGKTVFTREQALEAANELGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDIREILGST---LITKQTGPTGSRVNCVYVEDGADI 114
           +++  S K +I  +  I   T    I       G  V    V DG DI
Sbjct: 721 MQIAISDKDIIEFMDIINRHTQEHPILVDKYIMGKEVEVDAVCDGDDI 768


>gi|157143826|emb|CAL47326.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+    GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGKYSGGPTTGETKFYAETLLDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVK 347
           +G ++ I G I     + K   GI+ A+K
Sbjct: 61  RGKVMIIGGAIANFTDIAKTFTGIIQALK 89


>gi|47205828|emb|CAF92502.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 55

 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
           EG  VD    LIA S L ++   DLD+AA+ +V   + V
Sbjct: 1   EGTRVDDAKALIAASPLKILACDDLDEAAKMVVKLSEIV 39


>gi|301632141|ref|XP_002945149.1| PREDICTED: phosphoribosylamine--glycine ligase-like, partial
           [Xenopus (Silurana) tropicalis]
          Length = 430

 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 18/110 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA +R++ +P A     +   AA + ++ +  P+ VVK+   A G+             
Sbjct: 110 SKAFMRRHGIPTADYDTFTDPAAAHAFVERMGAPI-VVKADGLAAGK------------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV--NCVYV-EDGADI 114
            GV V ++L+     +  +L S          G+RV      V E+ + I
Sbjct: 156 -GVVVATTLQQAHEAVDFMLVSDKHGVAHNAGGARVVIEEFLVGEEASFI 204


>gi|121593081|ref|YP_984977.1| cyanophycin synthetase [Acidovorax sp. JS42]
 gi|120605161|gb|ABM40901.1| cyanophycin synthetase [Acidovorax sp. JS42]
          Length = 861

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 12/90 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +  V  A    + +  P+ VVK Q   G +GKG    +      
Sbjct: 209 KRLLHAAGVPVPLGRPVVDVEDAWVVAQEVGLPV-VVKPQ--DGNQGKGVVVNITTREG- 264

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGP 98
                  L++     RE  G  ++ ++  P
Sbjct: 265 -------LEAAYKTARE-FGDEIMVERFLP 286


>gi|317401763|gb|EFV82380.1| acyl-CoA synthetase [Achromobacter xylosoxidans C54]
          Length = 452

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 73/243 (30%), Gaps = 45/243 (18%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  + ALL    + V +  V  +   A +A + +  P+ +         + +     L
Sbjct: 228 LSEADSLALLAGNGLAVIEHAVCHTADEAIAAWRRIGAPVALKACSAQLPHKSEHGLVAL 287

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D +  +R   S +       + LG   +               V      L E  L  
Sbjct: 288 GLDDETALRAAFSHQ------AQTLGKLNVRDGAW---------LVARMQRGLHECALGA 332

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
            VD   G V  I S  GG  +E +             D  + +   D A + + L     
Sbjct: 333 RVDSVLGPVVMIGS--GGKYVEALR------------DVAVLMPPFDAAQVVEKLRDLRI 378

Query: 178 --------ELQGQARIDGGDLFPNL--YKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKI 226
                                   L  Y       ++ ++INP+++   G+    +D+ +
Sbjct: 379 GALLQGVRGDPPADVASLAQQAVALGNYALAAGPRLASVDINPVMVGAVGQGAVAVDALV 438

Query: 227 SFD 229
              
Sbjct: 439 ELH 441


>gi|307325044|ref|ZP_07604248.1| GCN5-related N-acetyltransferase [Streptomyces violaceusniger Tu
           4113]
 gi|306889190|gb|EFN20172.1| GCN5-related N-acetyltransferase [Streptomyces violaceusniger Tu
           4113]
          Length = 1001

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 8/85 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +Y V V   +      AA  A + L  P+ +  +  H   R       L   S+  
Sbjct: 784 RLLARYGVSVLPALPAPGPDAAVRAAERLGFPVALKPTAAHLRHRADLGGVRLELGSETE 843

Query: 70  VRVESS--------LKSVISDIREI 86
           +R   +         + +   ++ +
Sbjct: 844 LRRAYAELTDYLGRPEELGLVVQRM 868


>gi|326204448|ref|ZP_08194306.1| phosphoribosylamine/glycine ligase [Clostridium papyrosolvens DSM
           2782]
 gi|325985480|gb|EGD46318.1| phosphoribosylamine/glycine ligase [Clostridium papyrosolvens DSM
           2782]
          Length = 419

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A  +V  +   A   + T   P+ VVK+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYMVFDNCSEALQYLDTSSAPI-VVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +++     +  +    +  K  G  G   + V +E+         +S+L    
Sbjct: 152 -GVIIAQTIQDAKDAVNGM----MKDKVFGDAG---SRVVIEEFIQGPE---VSILAFTD 200

Query: 128 SGMVAFIASTQG 139
              +  + S+Q 
Sbjct: 201 GNTIVPMVSSQD 212


>gi|260949973|ref|XP_002619283.1| hypothetical protein CLUG_00442 [Clavispora lusitaniae ATCC 42720]
 gi|238846855|gb|EEQ36319.1| hypothetical protein CLUG_00442 [Clavispora lusitaniae ATCC 42720]
          Length = 1864

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    ++SS   A      L  P+ V KS    GG G  +      
Sbjct: 788 HSAREIAEKAGVPLVPGSGLVSSPEEARRIAAALEYPVMV-KSTAGGGGIGLQK------ 840

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S       G  G     V++E   +  R + + +  
Sbjct: 841 -----VDSEEDIERVFQTVQHQGQSYF-----GDAG-----VFLERFVENARHVEIQMFG 885

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + + +     L   T + + S  + L       
Sbjct: 886 DGYGKAIAL------GERDCSLQRRNQKIVEETPAPNLPEATRQKMRSAAEALGSSMNY- 938

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 939 -KCAGTVEFIYDE-RRDEFYFLEVNA 962


>gi|50955764|ref|YP_063052.1| phosphoribosylamine--glycine ligase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|71648809|sp|Q6ACE6|PUR2_LEIXX RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|50952246|gb|AAT89947.1| phosphoribosylamine-glycine ligase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 417

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP  + V  +++  A SA+     P YVVK+   A G+             
Sbjct: 107 AKRIMDEAGVPTGRAVRAATLAEAGSALDEFGAP-YVVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
            GV V     + ++     L    +  +    G  V+   V DG
Sbjct: 153 -GVIVTEDRAAALAHAARYLTHGSVLVEEFLDGEEVSLFLVSDG 195


>gi|303230220|ref|ZP_07316988.1| carbamoyl-phosphate synthase, large subunit [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515146|gb|EFL57120.1| carbamoyl-phosphate synthase, large subunit [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 1066

 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A++A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQAAAKNLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|300718029|ref|YP_003742832.1| CoA binding domain/acetyltransferase domain protein [Erwinia
           billingiae Eb661]
 gi|299063865|emb|CAX60985.1| CoA binding domain/acetyltransferase domain protein [Erwinia
           billingiae Eb661]
          Length = 883

 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 17/145 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE QA  +LR Y +      + S    A      +  P+ +         + +    
Sbjct: 481 LDTHEVQA--ILRAYGLNTLPTWIASDSAEAVHIAGQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I+    L   Q    G  V  +    G    +EL 
Sbjct: 530 LHKSEVQGVMLYLRTASEVEQAAEAIIDRVKLALPQANIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIE 144
           + ++          +   +GG++ +
Sbjct: 587 I-VVEQDPVFGPMIML-GEGGIEWQ 609


>gi|289581431|ref|YP_003479897.1| lysine biosynthesis enzyme LysX [Natrialba magadii ATCC 43099]
 gi|289530984|gb|ADD05335.1| lysine biosynthesis enzyme LysX [Natrialba magadii ATCC 43099]
          Length = 296

 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L K  VP  K  V  +   A  AI+    P  V+K  + + GR   +             
Sbjct: 99  LEKAGVPTPKTKVAFTKETAMEAIEEFGYPC-VLKPVVGSWGRLMAKIDS---------- 147

Query: 72  VESSLKSVISDIREILGS 89
                   I + +  LG 
Sbjct: 148 --PDAAEAILEHKATLGH 163


>gi|15602089|ref|NP_245161.1| phosphoribosylamine--glycine ligase [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|13431795|sp|P57829|PUR2_PASMU RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|12720449|gb|AAK02308.1| PurD [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 429

 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHHIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + ++E+L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLDEAEAAVKEML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|325288380|ref|YP_004264561.1| cyanophycin synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963781|gb|ADY54560.1| cyanophycin synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 875

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ +L    +PV +G V+ +    +   + L   + +       G +GKG    +  +++
Sbjct: 219 ARQILSDAGIPVPQGKVVETEGELKQYFRELGQAVVIKPC---GGNQGKGVSTNIKTEAE 275

Query: 68  GGVRV 72
             +  
Sbjct: 276 ALIAF 280


>gi|268579877|ref|XP_002644921.1| Hypothetical protein CBG10863 [Caenorhabditis briggsae]
          Length = 969

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 24/108 (22%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++Y +P A  V     +V + +S  + +P    VVK+   A G+           
Sbjct: 104 SKQFMKEYGLPTADFVTVSADNVKSLDSVFERVPWKKSVVKADGLAAGK----------- 152

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +    +   +  R IL       + G  G  V    +E+  +
Sbjct: 153 ---GVIIPKDNEEAKNAARSIL-----EGEFGSAGHTV---IIEERLE 189


>gi|327312104|ref|YP_004339001.1| hypothetical protein TUZN_2235 [Thermoproteus uzoniensis 768-20]
 gi|326948583|gb|AEA13689.1| hypothetical protein TUZN_2235 [Thermoproteus uzoniensis 768-20]
          Length = 364

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 6   YQAKAL----LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           Y +K L    LR   VPV + VV+        A   L  PL++ +++  AGGR
Sbjct: 113 YPSKDLIAERLRAAGVPVPETVVVRDEEDVYRAFDALGSPLWI-RAKEGAGGR 164


>gi|309389735|gb|ADO77615.1| carbamoyl-phosphate synthase large subunit [Halanaerobium
           praevalens DSM 2228]
          Length = 1071

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           LL K  +PV  G V ++++ AE     +  P+ V  S +  G
Sbjct: 677 LLNKLKIPVPAGKVAANLNEAEKIAAEIAYPVLVRPSYVLGG 718


>gi|303231601|ref|ZP_07318325.1| carbamoyl-phosphate synthase, large subunit [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513718|gb|EFL55736.1| carbamoyl-phosphate synthase, large subunit [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 1066

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A++A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQAAAKNLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|238019707|ref|ZP_04600133.1| hypothetical protein VEIDISOL_01582 [Veillonella dispar ATCC 17748]
 gi|237863748|gb|EEP65038.1| hypothetical protein VEIDISOL_01582 [Veillonella dispar ATCC 17748]
          Length = 1066

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 36/82 (43%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +P   G +++S   A++A K L  PL V  S +  G   +  + +   D    
Sbjct: 670 ELLAKLGIPRPVGALVTSDEEAQAAAKNLKYPLIVRPSYVLGGRAMEIVYNDKELDVYMK 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
             V +S +  +   R ++G  +
Sbjct: 730 EAVVASKEHPVLIDRYMVGMEV 751


>gi|126660853|ref|ZP_01731946.1| cyanophycin synthetase [Cyanothece sp. CCY0110]
 gi|126617861|gb|EAZ88637.1| cyanophycin synthetase [Cyanothece sp. CCY0110]
          Length = 638

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +   PV +G +++S+  A      +  P+ V     H G       ++       
Sbjct: 222 KRFLAELGFPVPQGDIVNSLEEARETATNIGYPVAVKPVAGHKGIGVTADVQDQQELETA 281

Query: 69  GVRVESSLKSVISDI 83
             R   S+    S  
Sbjct: 282 YQRAVLSIPEEGSKA 296


>gi|123965304|ref|YP_001010385.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9515]
 gi|123199670|gb|ABM71278.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9515]
          Length = 449

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + +  VP   G   ++SSV  A    K +  P+ ++K+    GGRG  R  E  A+
Sbjct: 119 AKETMERVGVPTVPGSKGLLSSVEEAYQMAKEIGYPV-IIKATAGGGGRGM-RLVENKAN 176

Query: 66  SKGGVRVESSLKSVI 80
            +   +         
Sbjct: 177 LEKMFKAAQGEAEAA 191


>gi|83816249|ref|YP_445740.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Salinibacter ruber DSM 13855]
 gi|83757643|gb|ABC45756.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Salinibacter ruber DSM 13855]
          Length = 379

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 17/157 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L     PV       ++  A  A +    P+ + + +    G G           + 
Sbjct: 108 KQHLADAGCPVPAFACCETLDEALDAAEEFGYPVVLKQYRGAYDGYGNATAAAEDELREA 167

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              + +   +++    +      +     P G++V                ++    R  
Sbjct: 168 WPDLATEDGAMVETFADFARELAVQVARRPGGNQVV-------------YPVAYTEQRDH 214

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
              A     +   DI++   D  + I +  +D + GV
Sbjct: 215 RCHAV----EVPADIDDAIADKARHIAQKSVDAVEGV 247


>gi|312622240|ref|YP_004023853.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202707|gb|ADQ46034.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 1077

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P   G    S+  A    + +  P+ V  S +  G                 +
Sbjct: 677 LLKNLNIPYPPGGAAYSLEDAVKVAQQIGYPVLVRPSYVLGG---------------RAM 721

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            +  S + +   I+   EI     I       G       + DG D+
Sbjct: 722 EIVYSREELEKYIKAAIEISIKHPILIDKYILGKEAEVDGISDGEDV 768



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 67/220 (30%), Gaps = 44/220 (20%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKKTMIEIGEPVPKSIIAHSVQEAIEFAREVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEELRYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVAS-----LCDML 177
            R S            +D   V       I   ++ P   ++     +       +   L
Sbjct: 222 -RDSNDNCITVCNMENIDP--VGIHTGDSI---VVAPSQTLSDKEYQMLRSASLNIIRSL 275

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +++G   +       N+     + +  +   + L     G
Sbjct: 276 KIEGGCNVQFALNPNNMEYVVIEVNPRVSRSSALASKATG 315


>gi|329940522|ref|ZP_08289803.1| carboxylase [Streptomyces griseoaurantiacus M045]
 gi|329300583|gb|EGG44480.1| carboxylase [Streptomyces griseoaurantiacus M045]
          Length = 422

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           ++ L  ++ VP A  V + +   A+ A + +  P+ V+K   HA              + 
Sbjct: 117 SRTLFAQHGVPSAASVSVRTRAEAQVAAERIGYPV-VLKPAAHA--------------AS 161

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV    + +       ++  +     Q    G     V VE+  D
Sbjct: 162 IGVIRADTPE-------QLTAAFAFADQAAGLGLESTSVLVEEYLD 200


>gi|329849566|ref|ZP_08264412.1| feruloyl-CoA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841477|gb|EGF91047.1| feruloyl-CoA synthetase [Asticcacaulis biprosthecum C19]
          Length = 698

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 20/136 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY+AKA+L    +P  +G  ++S      A   L  P+ V+K+Q           +    
Sbjct: 492 EYRAKAILGPLGIPFPEGRFVTSPE----ACGDLTYPV-VLKAQ---------SAELSHK 537

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQ-TGPTGSRVNCVYVEDGADILRELYLSLL 123
              GGV +  +++            TL +          ++ V +E   D   EL +   
Sbjct: 538 SDAGGVLL--NIRDAEQLATAW--KTLYSNVAAYNPALTLDGVLIEKMGDRGVELIIGAK 593

Query: 124 VDRTSGMVAFIASTQG 139
            D        +A   G
Sbjct: 594 TD-PDWGPVILAGLGG 608


>gi|325000917|ref|ZP_08122029.1| carbamoyl-phosphate synthase large subunit [Pseudonocardia sp. P1]
          Length = 1098

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ +    V +  V  S+    +A   L  P+ +         R       L +    
Sbjct: 133 KDIVTQVGGDVPRSRVCHSMDEVRAAAGELGLPVVI---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S   +       L ++            V  V +E+     +E  L L+ D   
Sbjct: 181 ---MAHSSDELDRLAGAGLDAS-----------PVTEVLIEESVLGWKEYELELMRDHHD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE +          + + P + +T  +   + D
Sbjct: 227 NVVVV-------CSIENLDPMGVHTGDSITVAPAMTLTDREYQHMRD 266



 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LRK  +P  +  + +S   A      +  P+ V  S +  GGRG
Sbjct: 680 EVLRKAGLPAPEFGMATSFDGAREIASRIGYPVLVRPSYVL-GGRG 724


>gi|167772966|ref|ZP_02445019.1| hypothetical protein ANACOL_04354 [Anaerotruncus colihominis DSM
           17241]
 gi|167664899|gb|EDS09029.1| hypothetical protein ANACOL_04354 [Anaerotruncus colihominis DSM
           17241]
          Length = 423

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A     ++   A   +        V+K+   A G+             
Sbjct: 106 AKNLMKKYGIPTADYHTFTNPSEALGFVTGKNEFPIVIKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV + ++L      I  I    +  K+ G +G   N + +E+  
Sbjct: 153 -GVVIANTLDEAAEAIHSI----MEDKKFGASG---NQIVIEEFL 189


>gi|160938634|ref|ZP_02085986.1| hypothetical protein CLOBOL_03529 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438333|gb|EDP16092.1| hypothetical protein CLOBOL_03529 [Clostridium bolteae ATCC
           BAA-613]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A      S  AA + ++T P P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPSAAYETFDSPEAALAYLETAPMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + S+ +     ++ +    ++ KQ G  G   + + +E+         +S+L    
Sbjct: 152 -GVLICSTREEAKEGVKTL----MLDKQFGSAG---DRIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKIMTSAQD 212


>gi|20095102|ref|NP_614949.1| carbamoylphosphate synthase large subunit [Methanopyrus kandleri
           AV19]
 gi|22095503|sp|Q8TUT7|CARB2_METKA RecName: Full=Carbamoyl-phosphate synthase large chain, C-terminal
           section; AltName: Full=Carbamoyl-phosphate synthetase
           ammonia chain
 gi|19888393|gb|AAM02879.1| Carbamoylphosphate synthase large subunit [Methanopyrus kandleri
           AV19]
          Length = 542

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL+K  +P  +    +    A    + +  P+ V  S +  G
Sbjct: 123 KLLKKLGIPQPESGTANDPEEAVEVAEDIGYPVLVRPSYVIGG 165


>gi|302391678|ref|YP_003827498.1| carbamoyl-phosphate synthase large subunit [Acetohalobium
           arabaticum DSM 5501]
 gi|302203755|gb|ADL12433.1| carbamoyl-phosphate synthase large subunit [Acetohalobium
           arabaticum DSM 5501]
          Length = 1070

 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 58/186 (31%), Gaps = 40/186 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L + + PV +  +  S+  A+   + +  P+ +  +                  + GG
Sbjct: 134 QMLHEIDEPVLESKIADSIEEAKEIAEGIGYPVIIRPA-------------YTMGGTGGG 180

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    + + +       L  +LI +           V +E      +E+   ++ D  + 
Sbjct: 181 V--ADNPEELEEVASRGLKHSLIDE-----------VLIEKSIKGWKEVEYEVMRDGANN 227

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQ 182
            +          ++E            +++ P   ++ ++          +   L ++G 
Sbjct: 228 CITV-------CNMENFDPVGIHTGDSIVVAPSQTLSDKEYQMLRSSSLKIIRELGIEGG 280

Query: 183 ARIDGG 188
             +   
Sbjct: 281 CNVQFA 286



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
             LL + ++P   G  + SV  A+     +  P+ V  S +  G   +  +KE
Sbjct: 672 MNLLDELDIPTPTGSTVYSVPEAKKTATEIGYPVVVRPSYVLGGRAMEVVYKE 724


>gi|300771045|ref|ZP_07080922.1| carbamoyl-phosphate synthase, large subunit [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762318|gb|EFK59137.1| carbamoyl-phosphate synthase, large subunit [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 938

 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M++ E + +   LL+  ++P  K  V  S   A      +  P+ V  S +  GG+G   
Sbjct: 666 MDLAEDRGRFSDLLKSLDIPYPKYGVAESAEEAIVVANQVGYPVLVRPSYVL-GGQGMSI 724

Query: 59  FKELPADSKGGVRVESSL 76
                   K  V +  +L
Sbjct: 725 VINDEDLEKAVVNLLKNL 742



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+    V VAK  + +S    + A + +  PL +  S   AG                
Sbjct: 133 RQLMVDIGVGVAKSKIANSFLEGKEAAQEIGYPLVIRPSYTLAG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G       +   + +             G   S  + V VE      +E  L LL  R +
Sbjct: 178 GGGFVHKKEEFDAAL-----------NRGLHASPTHEVLVEQAVLGWKEFELELL--RDA 224

Query: 129 GMVAFIASTQGGMDI 143
                I  T    D 
Sbjct: 225 NDNVIIICTIENFDP 239


>gi|157364759|ref|YP_001471526.1| phosphoribosylamine--glycine ligase [Thermotoga lettingae TMO]
 gi|157315363|gb|ABV34462.1| phosphoribosylamine--glycine ligase [Thermotoga lettingae TMO]
          Length = 415

 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 22/114 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KY +P A   +     +AE  I  +  P+ VVK+   A G+             
Sbjct: 103 AKILMAKYGIPTASFKIFDDPDSAEKYISEIDKPV-VVKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITK-------QTGPTGSRVNCVYVEDGADI 114
            G  V  + K     I  ++   +  +       +    G  V+ +   DG  I
Sbjct: 149 -GAIVARTKKDAFKAIDSLMRKKIFKEAGDKVVIEDFLEGFEVSALAFCDGKTI 201


>gi|114319773|ref|YP_741456.1| phosphoribosylamine--glycine ligase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226167|gb|ABI55966.1| phosphoribosylamine--glycine ligase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 430

 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 60/167 (35%), Gaps = 26/167 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +Y +P A   V + + +A++ I+    P+ VVK+   A G+              
Sbjct: 109 KHFLARYKIPTAAYQVFTDLESAQAYIREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   +    ++L         G  G     + VE+  +   EL    LVD   
Sbjct: 154 GVTVARTLGEALLAAEDML----TGSAFGEAGQ---RIVVEECLE-GEELSFIALVDGEH 205

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +   +AS+Q      +     P         P   +T E    + D
Sbjct: 206 VLP--LASSQ-DHKPRDEGDRGPNTGGMGAYSPAPVLTPERYKQVMD 249


>gi|308272718|emb|CBX29322.1| Phosphoribosylamine--glycine ligase [uncultured Desulfobacterium
           sp.]
          Length = 590

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 22/111 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KY +P A G + S+   A + I+    P  VVK+   A G+             
Sbjct: 106 SKELMIKYGIPTAAGKIFSNYKQAANYIRKTKAPC-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV--NCVYV-EDGADIL 115
            GV V S+ K  +  + +I    ++ +  G  G RV    +   E+ + I 
Sbjct: 152 -GVVVCSTEKEALDALDDI----MVKRSFGDAGKRVVIEELLAGEEASFIA 197


>gi|256389509|ref|YP_003111073.1| phosphoribosylamine/glycine ligase [Catenulispora acidiphila DSM
           44928]
 gi|256355735|gb|ACU69232.1| phosphoribosylamine/glycine ligase [Catenulispora acidiphila DSM
           44928]
          Length = 417

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 14/92 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++    +P AK  V  +      A+    G  YVVK    A G+             
Sbjct: 106 SKEVMAAAGIPTAKSYVCETDAEYAKALDEFAGFPYVVKDDALAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPT 99
            GV V     + +   R      +     GP 
Sbjct: 153 -GVVVTEDRAAALEHARACGRVVIEEYLDGPE 183


>gi|157382732|gb|ABV48804.1| ATP citrate lyase beta subunit [enrichment culture clone RaclB21]
          Length = 97

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 12/91 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDEK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKE 348
            +  ++ I G I     + K   GI+ A ++
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEK 91


>gi|289548781|ref|YP_003473769.1| phosphoribosylamine/glycine ligase [Thermocrinis albus DSM 14484]
 gi|289182398|gb|ADC89642.1| phosphoribosylamine/glycine ligase [Thermocrinis albus DSM 14484]
          Length = 430

 Score = 43.0 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + KY VP A   V      A+  ++ +  P  V+K+   A G+             
Sbjct: 106 AKNFMAKYGVPTANFEVFDDPQKAKRFVEDVSAP-LVIKADGLASGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV-DR 126
            G  V  + +  I      +   +I K  G  G     + VE+  +     Y+ ++  DR
Sbjct: 152 -GAIVCRTRQEAIKA----IDLLMIRKVFGKAG---ERIVVEEFLEGEEASYIVMVNGDR 203

Query: 127 TSGMVA 132
              +  
Sbjct: 204 YIPLPT 209


>gi|90415133|ref|ZP_01223086.1| putative acetyltransferase [Photobacterium profundum 3TCK]
 gi|90323740|gb|EAS40364.1| putative acetyltransferase [Photobacterium profundum 3TCK]
          Length = 635

 Score = 43.0 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 77/244 (31%), Gaps = 30/244 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++ + +L  Y        + S    A    + +  P+ +         + +       ++
Sbjct: 228 HEVRPVLESYGFKTLPTWIASDPAEAVHIAEQIGYPVAI---------KLRSPDIRHKSE 278

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYLSLLV 124
             G +    +   V +  + IL    +   +    G  V  +         +EL +S+  
Sbjct: 279 VHGVLLHLRTADEVANGAQAILDRVSMNYPSARIDGLLVQRM---ASRSGAQELRISVHN 335

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVA------SLCDML 177
           D   G V  +       +I + A         + I PL + +    V        +    
Sbjct: 336 DSVFGPVILMGEDAAAWNIHKDAA--------VAIPPLNMALARYMVINAIKTGKIRQRS 387

Query: 178 ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            L+         L   + +   D  ++   +I+PL+      + V+D+ ++    +  + 
Sbjct: 388 NLEQIDIPALCHLLVKISQLIIDCPEIVDFDIHPLLASGT-DMTVIDASMTLHPFSGDKQ 446

Query: 237 LDIQ 240
             + 
Sbjct: 447 ARLA 450


>gi|117624806|ref|YP_853719.1| acyl-CoA synthetase (NDP forming) [Escherichia coli APEC O1]
 gi|218559506|ref|YP_002392419.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli S88]
 gi|237705094|ref|ZP_04535575.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA]
 gi|115513930|gb|ABJ02005.1| acyl-CoA synthetase (NDP forming) [Escherichia coli APEC O1]
 gi|218366275|emb|CAR04022.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli S88]
 gi|226901460|gb|EEH87719.1| acyl-CoA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294493259|gb|ADE92015.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli IHE3034]
 gi|307625867|gb|ADN70171.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli UM146]
 gi|315288000|gb|EFU47402.1| CoA binding domain protein [Escherichia coli MS 110-3]
 gi|323949238|gb|EGB45129.1| acetyltransferase [Escherichia coli H252]
 gi|323955820|gb|EGB51578.1| acetyltransferase [Escherichia coli H263]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S+   A    K +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASNSTEAVHIAKQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|91211912|ref|YP_541898.1| hypothetical protein UTI89_C2907 [Escherichia coli UTI89]
 gi|91073486|gb|ABE08367.1| hypothetical protein YfiQ [Escherichia coli UTI89]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S+   A    K +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASNSTEAVHIAKQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|134300200|ref|YP_001113696.1| phosphoribosylamine--glycine ligase [Desulfotomaculum reducens
           MI-1]
 gi|134052900|gb|ABO50871.1| phosphoribosylamine--glycine ligase [Desulfotomaculum reducens
           MI-1]
          Length = 422

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A+         A   +K    P  V+K+   A G+             
Sbjct: 106 AKDIMAKYNIPTARYATFEDAEEAREYVKKYGAPC-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V    ++ ++ +  I+            G   + V +E+         +S+L    
Sbjct: 152 -GVIVAMDDETALAAVDIIMAERAF-------GKAGDRVVIEEFLQGEE---VSILAFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + ++Q 
Sbjct: 201 GETIVPMVASQD 212


>gi|282896417|ref|ZP_06304438.1| Cyanophycin synthetase [Raphidiopsis brookii D9]
 gi|281198705|gb|EFA73585.1| Cyanophycin synthetase [Raphidiopsis brookii D9]
          Length = 860

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 15/110 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    VPV KG VI+ +   E +I+ + G   V+K     G  G+G   ++      
Sbjct: 200 KRILANSGVPVPKGTVINFLDDLEGSIEYVGGYPIVIKP--LDGNHGRGITIDIRNWD-- 255

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV-----NCVYVEDGAD 113
                   ++     R++  S ++ +       RV       V V +   
Sbjct: 256 ------DAEAAYHSARQVSRSIIVERYYVGRDHRVLVVDGKVVAVAERVP 299


>gi|257887618|ref|ZP_05667271.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,141,733]
 gi|257823672|gb|EEV50604.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,141,733]
          Length = 424

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMETYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G+    + VE+         L+ + D  
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GNSSKKIVVEEFLAGEEFSLLAFVRDTK 204

Query: 128 SGMVAF 133
              +  
Sbjct: 205 VYPMVI 210


>gi|302922225|ref|XP_003053421.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734362|gb|EEU47708.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1174

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 71/230 (30%), Gaps = 46/230 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL  +  +P+AK + + ++  A  A + +  P+ V  +    G               
Sbjct: 218 AKAL-EEIEIPIAKSIAVGTIEEALDAAEKVGYPIIVRAAYALGGL-------------- 262

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G    ++ + + +     L  +               + VE      +E+   ++ D  
Sbjct: 263 -GSGFANNEEELRNMAARSLTLS-------------PQILVEKSLKGWKEVEYEVVRDAN 308

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
           +  +          ++E            +++ P   ++ E+          +   L + 
Sbjct: 309 NNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIVRHLGVV 361

Query: 181 GQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 362 GECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 410


>gi|167045681|gb|ABZ10329.1| putative carbamoyl-phosphate synthase L chain, ATP binding domain
           protein [uncultured marine crenarchaeote
           HF4000_APKG10L15]
          Length = 1014

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 65/221 (29%), Gaps = 36/221 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K NVP+ K   + +   A+   K L  P+ V  +    G  G   F E+      
Sbjct: 67  KDSMIKCNVPILKSKTVRTFDEAKKVAKDLGYPVIVRVAYTLGGKGGGVAFNEIELYEIT 126

Query: 69  GVRVESSL------KSVISDIREIL---------GSTLITKQTGPTGSRVNC---VYVED 110
           G  + +SL      +  + D ++I           + ++         RV+    + V  
Sbjct: 127 GRGLAASLVGQILIEEYVGDWKQIEYEVMQDYSKNNVIVCNMENVLSMRVHTGDNIVVAP 186

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQ----GGMDIEEVAKDYPQKIFKLLIDP----- 161
              I    Y            A  A+ Q    G  +I+        K   + I+P     
Sbjct: 187 SQTIDNHEY------HMLRSAALQATKQVGIVGECNIQFALDQSSDKYAAIEINPRLSRS 240

Query: 162 ---LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
                  T   +A +   + L          +       F 
Sbjct: 241 SALASKATGYPLAYMSAKIGLGYSLPELVNTITKKTTACFE 281


>gi|168823160|ref|ZP_02835160.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205340539|gb|EDZ27303.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320085528|emb|CBY95307.1| Uncharacterized protein yfiQ [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|168262179|ref|ZP_02684152.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205349001|gb|EDZ35632.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|56412526|ref|YP_149601.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|194442623|ref|YP_002041918.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|197361461|ref|YP_002141097.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|56126783|gb|AAV76289.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194401286|gb|ACF61508.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|197092937|emb|CAR58366.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|16761509|ref|NP_457126.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29140794|ref|NP_804136.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213425260|ref|ZP_03358010.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|289825482|ref|ZP_06544689.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25512315|pir||AD0831 probable acyl-CoA synthetase STY2844 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503810|emb|CAD05835.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136418|gb|AAO67985.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|113461778|ref|YP_719847.1| hypothetical protein HS_1642 [Haemophilus somnus 129PT]
 gi|112823821|gb|ABI25910.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 392

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + R+  + VA+G V +S   A    K L  P+ +
Sbjct: 119 QMKEIFRQAGLKVAQGKVFNSDDEARKLAKKLKFPVII 156


>gi|331654047|ref|ZP_08355048.1| putative CoA binding domain protein [Escherichia coli M718]
 gi|331048896|gb|EGI20972.1| putative CoA binding domain protein [Escherichia coli M718]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFNALDVTLDI 694


>gi|229829309|ref|ZP_04455378.1| hypothetical protein GCWU000342_01396 [Shuttleworthia satelles DSM
           14600]
 gi|229792472|gb|EEP28586.1| hypothetical protein GCWU000342_01396 [Shuttleworthia satelles DSM
           14600]
          Length = 427

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 24/112 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V +   AA + ++    P+ V+K+   A G+             
Sbjct: 106 SKNLMKKYAIPTASYEVFTDPDAACAYLEHESYPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDG 111
            GV +    +   + ++EI+        G+ L+ ++   TG  V+ +   DG
Sbjct: 152 -GVLICQDFEEAKAGVKEIMTDKKFGSAGNELVIEEFM-TGREVSALAFCDG 201


>gi|157143818|emb|CAL47322.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 92

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKV----AAAFKIITSDSSVKG 323
             MV G G ++   D I    G    AN+ +  GG    +        F ++T     +G
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTRYKDDRG 60

Query: 324 ILINIFGGIMRCDVLVK---GILSAVKE 348
            ++ I G I     + K   GI++A ++
Sbjct: 61  KILIIGGAIANFTDVAKTFTGIINAFEK 88


>gi|17228069|ref|NP_484617.1| cyanophycin synthetase [Nostoc sp. PCC 7120]
 gi|17129918|dbj|BAB72531.1| cyanophycin synthetase [Nostoc sp. PCC 7120]
          Length = 636

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA L     PV +G ++ S   A    K +  P+ V K  +  G +G G   ++    + 
Sbjct: 221 KAFLHTLGFPVPQGEIVYSPKEARQVAKDIGYPVAV-KPVV--GHKGIGVTADVKDVDEL 277

Query: 69  GVRVESSLKSVIS 81
            V  + +L+++  
Sbjct: 278 EVAYDRALEAIPE 290


>gi|307255069|ref|ZP_07536887.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259506|ref|ZP_07541231.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861942|gb|EFM93918.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866442|gb|EFM98305.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|238912716|ref|ZP_04656553.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|207858005|ref|YP_002244656.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|206709808|emb|CAR34160.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 87/271 (32%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRSYPHQLEEWVEMKNGD 724


>gi|62183017|gb|AAX73204.1| phosphoribosylamine--glycine ligase [Paenibacillus massiliensis]
          Length = 317

 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KYN+P A          A + ++    P+ V+K+   A G+              
Sbjct: 2   KDLLHKYNIPTAAYRKFHQYEEALAYLREQSVPV-VIKADGLAAGK-------------- 46

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     + ++    ++ K  G +G   + V +E+     +E+ +   VD  +
Sbjct: 47  GVVVAQTLEEAEKALSDM----MVGKVFGSSG---DQVVIEEFL-AGQEMSILAFVDGET 98

Query: 129 GMVAFIA 135
                 A
Sbjct: 99  VRPMVAA 105


>gi|291570064|dbj|BAI92336.1| carbamoyl-phosphate synthase large subunit [Arthrospira platensis
           NIES-39]
          Length = 1077

 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 53/169 (31%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  V      + ++++ A +  + +     +++     GG G G           
Sbjct: 133 KQAMEKIGVACCPSGIANNLNEARAIAEQIGTYPLIIRPAFTMGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +         L ++            ++ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEYEELAMGGLDAS-----------PMSQILVEQSLIGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S      IE +          + + P   +T ++   L D  
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDAA 269


>gi|284049940|ref|ZP_06380150.1| carbamoyl phosphate synthase large subunit [Arthrospira platensis
           str. Paraca]
          Length = 1077

 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 53/169 (31%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  V      + ++++ A +  + +     +++     GG G G           
Sbjct: 133 KQAMEKIGVACCPSGIANNLNEARAIAEQIGTYPLIIRPAFTMGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +         L ++            ++ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEYEELAMGGLDAS-----------PMSQILVEQSLIGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S      IE +          + + P   +T ++   L D  
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDAA 269


>gi|302552515|ref|ZP_07304857.1| phosphoribosylamine-glycine ligase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302470133|gb|EFL33226.1| phosphoribosylamine-glycine ligase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 416

 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++   A +A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAEVPTARSYVCTTPEEAATALDAFGAP-YVVKDDGLAAGKG 152


>gi|170697314|ref|ZP_02888407.1| CoA-binding domain protein [Burkholderia ambifaria IOP40-10]
 gi|170137768|gb|EDT06003.1| CoA-binding domain protein [Burkholderia ambifaria IOP40-10]
          Length = 699

 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 74/240 (30%), Gaps = 38/240 (15%)

Query: 3   IHEYQAKALLRKYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E QAKAL  ++ V PV +  V+     AE A +       V+K             + 
Sbjct: 483 LDEAQAKALFARFGVTPV-RERVVRDAVDAEQAARHFG-DRVVLK---------LLSNRV 531

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV V  +  ++ + +  +             G   +   V++      E+ + 
Sbjct: 532 THKSDIGGVAVGLNADAIGARLERM-----RDDVETGAGFAPDAFLVQEMVTGGVEMIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           L  D     +       GG+  E         +  L  D    ++ +D   +   L    
Sbjct: 587 LHRDPLGTAILL---GMGGVTAEIFNDTV---LRMLPED--APLSRDDALDMIRALRTWP 638

Query: 178 ------ELQGQARIDGGDLFPNLYKAFCDKDMSLL--EINPLIIMKNGR-LRVLDSKISF 228
                            D      +        L+  EINPL +++ GR +R  D     
Sbjct: 639 LLDGYRGRPKADVDALADALVAFARMARQLGPRLVEAEINPLFVLEAGRGVRAADGVAVL 698


>gi|168703983|ref|ZP_02736260.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
           [Gemmata obscuriglobus UQM 2246]
          Length = 1114

 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 33/165 (20%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           K  V V K VV+ ++  A  A+  +  P  V++     GG G G              + 
Sbjct: 138 KIGVAVPKSVVVHTLEEAMRALDEIGLPC-VLRPSFTMGGSGGG--------------IA 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            +       I   L  +  T+           V VE+     +E  L ++ D+ +  V  
Sbjct: 183 YNRDEYRDIITHGLALSPTTE-----------VLVEESVIGWKEYELEVMRDK-ADNVVI 230

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           I S      IE +          + + P   ++ ++   + D  +
Sbjct: 231 ICS------IENLDPMGVHTGDSITVAPAQTLSDKEYQRMRDKAK 269


>gi|150403176|ref|YP_001330470.1| CoA-binding domain-containing protein [Methanococcus maripaludis
           C7]
 gi|150034206|gb|ABR66319.1| CoA-binding domain protein [Methanococcus maripaludis C7]
          Length = 703

 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 34/149 (22%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQDKV 308
             + N  G  +   D ++ +G   A F                     LD+ G AD ++ 
Sbjct: 300 AVITNAGGFGVLAADSVENFGLELAEFSGTTVSELKKYLPDTSGISNPLDLIGDADVERY 359

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI-------NIPLVMR-LE 360
             AF+++ +D +V G+L  +     +      G+   + ++K         IP+V   + 
Sbjct: 360 KHAFELVENDPNVDGLLAIL---TPQGMTDALGVARELVKLKNYMICKKDKIPIVASFVG 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G +V      + E G+      +L  A +
Sbjct: 417 GTSVLEARSYLQEKGIPSFICPEL--AVK 443


>gi|239980934|ref|ZP_04703458.1| phosphoribosylamine--glycine ligase [Streptomyces albus J1074]
 gi|291452796|ref|ZP_06592186.1| phosphoribosylglycinamide synthetase [Streptomyces albus J1074]
 gi|291355745|gb|EFE82647.1| phosphoribosylglycinamide synthetase [Streptomyces albus J1074]
          Length = 424

 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 15/76 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++    ++A+     P YVVK    A G+             
Sbjct: 106 AKDVMAGAGVPTARSYVCTTAAEIDTALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDI 83
            GV V   +       
Sbjct: 152 -GVVVTEDVDEAREHA 166


>gi|200387306|ref|ZP_03213918.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199604404|gb|EDZ02949.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|229220867|gb|ACQ45366.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase isoform 1
           (predicted) [Dasypus novemcinctus]
          Length = 1010

 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P AK    +    A + I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAKWRAFTKPEEACTFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  + +     ++E+    +  K  G  G     V +E+  +      L     R
Sbjct: 157 -GVIVAENKEEACKAVQEV----MQDKAFGTAG---ETVVIEELLEGEEVSCLCFTDGR 207


>gi|255079148|ref|XP_002503154.1| predicted protein [Micromonas sp. RCC299]
 gi|226518420|gb|ACO64412.1| predicted protein [Micromonas sp. RCC299]
          Length = 429

 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+KYN+P AK    +   AA+  I+    P+ VVK+   A G+              
Sbjct: 109 KDLLKKYNIPTAKYERFTDPEAAKKYIQKEGAPI-VVKTDGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V   +++ +  + ++    ++    G  G+    + VED  D     + +++
Sbjct: 154 GVIVAMDVQTALDAVDDM----MVNSAFGSAGA---EIVVEDFLDGEEASFFAVV 201


>gi|168238346|ref|ZP_02663404.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194735388|ref|YP_002115663.1| CoA binding domain/acetyltransferase domain-containing protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194710890|gb|ACF90111.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197288830|gb|EDY28203.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|121596261|ref|YP_988157.1| CoA-binding domain-containing protein [Acidovorax sp. JS42]
 gi|120608341|gb|ABM44081.1| CoA-binding domain protein [Acidovorax sp. JS42]
          Length = 695

 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 24/81 (29%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +  LL ++ VP     +  +   A +A   +  P  V         + +     L
Sbjct: 480 LNEVDSMGLLARHGVPTVPMHLCRTADQARAAFDAIGAPAVVKACSAEVPHKSEHGLVAL 539

Query: 63  PADSKGGVRVESSLKSVISDI 83
              ++              D 
Sbjct: 540 NVQTREQAAELFERFWARMDA 560


>gi|332088096|gb|EGI93221.1| acetyltransferase family protein [Shigella boydii 5216-82]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQVGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +  + +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYQRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GGM+        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGMEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|302871664|ref|YP_003840300.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574523|gb|ADL42314.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 1077

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P   G    S+  A    + +  P+ V  S +  G                 +
Sbjct: 677 LLKDLNIPYPPGGAAYSLEDAIKVAEKIGYPVLVRPSYVLGG---------------RAM 721

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            +  S   +   I+   EI     I       G       + DG D+
Sbjct: 722 EIVYSRDELEKYIKAAIEISIKHPILIDKYILGKEAEVDGISDGEDV 768



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 30/129 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKKTMIEIGEPVPKSIIAHSVQEAIEFAREVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEELRYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVMR 222

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 223 DSNDNCITV 231


>gi|312114476|ref|YP_004012072.1| CoA-binding protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219605|gb|ADP70973.1| CoA-binding domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 911

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 79/235 (33%), Gaps = 27/235 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AKA+L  Y +P    +V  +   A  A   L    P  VVK       R          
Sbjct: 493 EAKAVLAAYGIPTVPTLVARTPEEAGEAAAELLRKSPSVVVK----ILSRNLSH-----K 543

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSL 122
              GGVR++      +          L         + +  V V+         EL L +
Sbjct: 544 SDIGGVRLDLMSAEAVETATH---QMLKAIGEARPDAILEGVTVQPMVRRPNAYELILGI 600

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
             D  +     +    GG  +E +       +    +D  +         +  +L   + 
Sbjct: 601 TTD-PTFGPVILF-GAGGTGVEAIGDT---AMSLTPLDLKLARDLIASTRIYKLLKGFRD 655

Query: 182 QARIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +  +D   L   L K    A   + +  L+INPL+I   G +  LD++I   D A
Sbjct: 656 RPPVDLDGLALCLVKLSSLAVQHRAIRELDINPLLIDAKG-MIALDARIKVVDPA 709


>gi|227551265|ref|ZP_03981314.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX1330]
 gi|257896113|ref|ZP_05675766.1| phosphoribosylglycinamide synthetase [Enterococcus faecium Com12]
 gi|293376990|ref|ZP_06623201.1| phosphoribosylamine--glycine ligase [Enterococcus faecium PC4.1]
 gi|227179605|gb|EEI60577.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX1330]
 gi|257832678|gb|EEV59099.1| phosphoribosylglycinamide synthetase [Enterococcus faecium Com12]
 gi|292644359|gb|EFF62458.1| phosphoribosylamine--glycine ligase [Enterococcus faecium PC4.1]
          Length = 424

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMETYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G+    + VE+         L+ + D  
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GNSSKKIVVEEFLAGEEFSLLAFVRDTK 204

Query: 128 SGMVAF 133
              +  
Sbjct: 205 VYPMVI 210


>gi|222152250|ref|YP_002561425.1| phosphoribosylamine--glycine ligase [Streptococcus uberis 0140J]
 gi|222113061|emb|CAR40415.1| phosphoribosylamine-glycine ligase [Streptococcus uberis 0140J]
          Length = 420

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY VP A     S    A++ I     P+ VVK+   A G+             
Sbjct: 107 AKEIMVKYQVPTAAYGTFSDFEEAKTYILEKGAPI-VVKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  ++   I   R++L    +  + G +G+RV    +E+  +
Sbjct: 153 -GVVVAETVDQAIDAARDML----LDNKFGDSGARV---VIEEFLE 190


>gi|168232179|ref|ZP_02657237.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194468756|ref|ZP_03074740.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194455120|gb|EDX43959.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205333679|gb|EDZ20443.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|78184411|ref|YP_376846.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           CC9902]
 gi|78168705|gb|ABB25802.1| carbamoyl-phosphate synthase large subunit [Synechococcus sp.
           CC9902]
          Length = 1106

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + S++  A++    +     +++     GG G G           
Sbjct: 133 KQAMERIGVSVCPSGIASTLEEADAVGAEISSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFAAICK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|170718090|ref|YP_001785124.1| ATP-dependent carboxylate-amine ligase domain-containing protein
           [Haemophilus somnus 2336]
 gi|168826219|gb|ACA31590.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Haemophilus somnus 2336]
          Length = 392

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + R+  + VA+G V +S   A    K L  P+ +
Sbjct: 119 QIKEIFRQAGLKVAQGKVFNSDDEARKLAKKLKFPVII 156


>gi|23013940|ref|ZP_00053786.1| COG1042: Acyl-CoA synthetase (NDP forming) [Magnetospirillum
           magnetotacticum MS-1]
          Length = 903

 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 80/231 (34%), Gaps = 22/231 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E +AKA+L  Y +P  +  V  S   A      +  P+ +                 L
Sbjct: 492 LNEPEAKAVLESYGIPTVETHVARSPALAGKIAMAMKVPVAL----------KILSPDIL 541

Query: 63  PADSKGGVRVESS-LKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                GGV +       V      +L     +  Q    G  V  +         +EL  
Sbjct: 542 HKSDVGGVMLNLEGAFEVEKAAHAMLERVKEVYPQARIDGFTVQTM---ARRPGAQELIC 598

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-VASLCDMLEL 179
            +  D   G    +   QGG+ +E V  D    +  L ++    V S   V+ L +    
Sbjct: 599 GVATDPVFG-PVIMF-GQGGIAVE-VIADRAMALPPLNMNLAAEVISRTRVSRLLEGYRG 655

Query: 180 QGQARIDGGDL-FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +  A  +   L    L +   D  ++  L+INPL     G +  LD+++  
Sbjct: 656 RPPANKEAIQLALVQLSQLVVDFPEIVELDINPLFADAQG-VLALDARMVV 705



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 30/184 (16%)

Query: 231 NALYRHLDIQELRDVSEED-SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           +A  R   +  ++D+ E   + E  A+   +    L      + NG G  +   D +   
Sbjct: 269 DAAMRRAGMLRVKDIEEIFGAVETLARSKPMKGKRL----AILTNGGGFGVIASDDLAEM 324

Query: 290 GGAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI-N 327
           GG  A                     N +D+ G AD D+   A  I++   +V  +L+ +
Sbjct: 325 GGELAQLPDDVIDKLKAILPPGWTQGNPVDISGDADGDRYVKALNILSESRAVDAVLVMH 384

Query: 328 IFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
               +     +   I+   K+      +   +    V  G  L + +G+      D   A
Sbjct: 385 SPSAVSDPTDVAAAIIKTAKDRPRANVMTCWVGNEAVARGRHLFSGAGIPTY---DTPRA 441

Query: 388 AQKI 391
           A + 
Sbjct: 442 AIQA 445


>gi|310829435|ref|YP_003961792.1| carbamoyl-phosphate synthase large subunit [Eubacterium limosum
           KIST612]
 gi|308741169|gb|ADO38829.1| carbamoyl-phosphate synthase large subunit [Eubacterium limosum
           KIST612]
          Length = 1068

 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 60/217 (27%), Gaps = 34/217 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++++   PV    V+++V  A     T+  P+ V  +    G             + G
Sbjct: 133 KDMMKEIGEPVIPSKVVTTVDDALDFASTMGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +       L  +            +  + VE G    +E+   ++  R S
Sbjct: 180 GI--ADNPEQLHEIATHGLRLS-----------PITQILVERGISGWKEIEFEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                   +    D   V       I         D    +       +   L ++G   
Sbjct: 225 KGNVITVCSMENFDP--VGIHTGDSIVVAPCQTLSDKEYQMLRTSALKIISALGVEGGCN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
                   N   A  + +  +   + L     G    
Sbjct: 283 CQFALDPENFNYAVIEVNPRVSRSSALASKATGYPIA 319



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P  KG  + +   A    + L  P+ +  S +  G
Sbjct: 675 DLLERCAIPRPKGETVYTTEEAVKVAERLGFPVLLRPSYVLGG 717


>gi|289549279|ref|YP_003474267.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Thermocrinis albus DSM 14484]
 gi|289182896|gb|ADC90140.1| Carbamoyl-phosphate synthase L chain ATP- binding protein
           [Thermocrinis albus DSM 14484]
          Length = 557

 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 41/139 (29%), Gaps = 32/139 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      + V    V+SS+  A  AIK +  P                  +    
Sbjct: 129 RQLFKKSMERIGLKVPPSAVVSSLEEALQAIKEIGFP---------------AILRPAFT 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  +++  +  +           Q     S ++ V ++      +E    ++ 
Sbjct: 174 LGGTGGAIAYNMEEFVERL-----------QIALKTSPIHQVLIDKSLIGWKEYEFEVVR 222

Query: 125 DRTSGMVAFIASTQGGMDI 143
           DR       I  +    D 
Sbjct: 223 DRKDN--VIIVCSIENFDP 239


>gi|162457299|ref|YP_001619666.1| hypothetical protein sce9014 [Sorangium cellulosum 'So ce 56']
 gi|161167881|emb|CAN99186.1| purD [Sorangium cellulosum 'So ce 56']
          Length = 444

 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 23/100 (23%)

Query: 8   AKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +KA L+++     +P A   ++ S   A   I+    P+ VVK+     G+         
Sbjct: 119 SKAFLKEFAARNGIPTAPFRIVRSFDEAARVIRERGAPI-VVKADGLCAGK--------- 168

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                GV V +++   ++  +++L    + ++ G  G+ V
Sbjct: 169 -----GVVVATTVDEALAAAKDML----VDRRFGDAGATV 199


>gi|302388641|ref|YP_003824462.1| cyanophycin synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199269|gb|ADL06839.1| cyanophycin synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 875

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K +L    +PV +G V+ S   A  A + L  P+ +
Sbjct: 218 KKMLTLAGIPVPEGTVVCSEEEAVRAARELGFPVVI 253


>gi|188584697|ref|YP_001916242.1| cyanophycin synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349384|gb|ACB83654.1| cyanophycin synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 894

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  +PV  G + S+   A + ++ +  P+ V+K +    G+G         +++   +
Sbjct: 222 LHELGLPVPYGKIASTEEEAVAIVQEIGYPI-VIKPRDGNQGKGVTLNINSEQETRSAFK 280

Query: 72  VESSLKSVISDIREILGST----LITKQTGPTGSRVNCVYVEDGADILREL 118
           V  S        + I G      ++  Q      R+    V DG   +REL
Sbjct: 281 VAMSYGDEAIVEQHIEGKHYRLVVVGDQLVAGAERIPAHVVGDGQHTIREL 331


>gi|312793754|ref|YP_004026677.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876847|ref|ZP_07736824.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796362|gb|EFR12714.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312180894|gb|ADQ41064.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 1077

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P   G    S+  A    + +  P+ V  S +  G                 +
Sbjct: 677 LLKNLNIPYPPGGAAYSLEDAVRVAEKIGYPVLVRPSYVLGG---------------RAM 721

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            +  S   +   I+   EI     I       G       + DG D+
Sbjct: 722 EIVYSRDELEKYIKAAIEISIKHPILIDKYILGKEAEVDGISDGEDV 768



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 30/129 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKKTMIEIGEPVPKSIIAHSVQEAIEFAREVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEDLRYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVMR 222

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 223 DSNDNCITV 231


>gi|312127411|ref|YP_003992285.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777430|gb|ADQ06916.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 1077

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P   G    S+  A    + +  P+ V  S +  G                 +
Sbjct: 677 LLKNLNIPYPPGGAAYSLEDAVRVAEKIGYPVLVRPSYVLGG---------------RAM 721

Query: 71  RVESSLKSVISDIR---EILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            +  S + +   I+   EI     I       G       + DG D+
Sbjct: 722 EIVYSREELEKYIKAAIEISIKHPILIDKYILGKEAEVDGISDGEDV 768



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 30/129 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV K ++  SV  A    + +  P+ V  +    G            
Sbjct: 129 RELFKKTMIEIGEPVPKSIIAHSVQEAIEFAREVGYPVIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +     + L  +L           ++ V +E      +E+   ++ 
Sbjct: 177 -TGGGI--AYNEEELRYIASKGLKLSL-----------IHQVLIEQSVLGWKEIEYEVMR 222

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 223 DSNDNCITV 231


>gi|296282930|ref|ZP_06860928.1| phosphoribosylamine--glycine ligase [Citromicrobium bathyomarinum
           JL354]
          Length = 426

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 23/115 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +  +P A+    +S+ AA  A+K    P +V+K+   A G+              
Sbjct: 107 KDLCARAGIPTARYERATSLEAAWGALKHFNAP-FVLKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV +  + +     + E+      +          + V +E+        + +L 
Sbjct: 152 GVVIAETREEAQHALSEMFDGRFGSAG--------SEVVIEEFMRGEEASFFALT 198


>gi|291544810|emb|CBL17919.1| carbamoyl-phosphate synthase large subunit [Ruminococcus sp. 18P13]
          Length = 1064

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 65/223 (29%), Gaps = 41/223 (18%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K   P     V+ ++  A    + +  P+ V  +    G             
Sbjct: 130 QAFKDTMEKIGEPCIPSKVVETIEDAVDFAEEIGYPVIVRPAFTLGG------------- 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + GG+   +  + +    +  L  +            +  V +E      +E+   ++ D
Sbjct: 177 TGGGI--AADEEELRDIAKNGLRLS-----------PITQVLIEKCISGWKEIEFEVIRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLE 178
           R          +    D   V       I   +I P + ++  +         ++   L+
Sbjct: 224 R--KGNVITVCSMENFDP--VGVHTGDSI---VIAPAVTLSDREYQMLRTAAINIIQELK 276

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           ++G           +   A  + +  +   + L     G    
Sbjct: 277 VEGGCNCQFALHPTSFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|204929498|ref|ZP_03220572.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204321217|gb|EDZ06417.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|322613368|gb|EFY10310.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322620428|gb|EFY17293.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322625104|gb|EFY21933.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629452|gb|EFY26228.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633839|gb|EFY30578.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322635445|gb|EFY32156.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639879|gb|EFY36558.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322644235|gb|EFY40779.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649927|gb|EFY46347.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322654890|gb|EFY51207.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658182|gb|EFY54448.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322661746|gb|EFY57964.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669727|gb|EFY65873.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673266|gb|EFY69371.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322674945|gb|EFY71032.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682968|gb|EFY78986.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322685629|gb|EFY81624.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323191943|gb|EFZ77181.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323200424|gb|EFZ85505.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323201323|gb|EFZ86390.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208394|gb|EFZ93334.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323211531|gb|EFZ96369.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323215962|gb|EGA00694.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221743|gb|EGA06151.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225649|gb|EGA09876.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323229367|gb|EGA13491.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235318|gb|EGA19402.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323237496|gb|EGA21559.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323245251|gb|EGA29252.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323246476|gb|EGA30457.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323253993|gb|EGA37815.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259043|gb|EGA42691.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323261966|gb|EGA45531.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323267749|gb|EGA51230.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269692|gb|EGA53144.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|197263395|ref|ZP_03163469.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198241823|ref|YP_002216666.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197241650|gb|EDY24270.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936339|gb|ACH73672.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624422|gb|EGE30767.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|29828363|ref|NP_822997.1| acyl-CoA synthetase (NDP forming type) [Streptomyces avermitilis
           MA-4680]
 gi|29605466|dbj|BAC69532.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
          Length = 715

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 27/222 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    + + V  A +      GP+ +                 L    
Sbjct: 29  EGKVIADAYGIAVPGEELATDVDEAVAYAARFGGPVVM----------KIVSPDILHKTD 78

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GGV V        +D+R      +   +     +R+  V V++     +E+ +  + D 
Sbjct: 79  AGGVIVGV---EGAADVRAAFCRIVENARAYNERARIEGVQVQELLPRGQEVIVGAVTDP 135

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-------TSEDVASLCDMLEL 179
           T G V       GG+ +E       +      +D    +       ++E +  +     +
Sbjct: 136 TFGKVVAFG--LGGVLVEVFKDVTFRLA---PVDADEALSMLDSIRSTEILRGVRGAAAV 190

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
              A  +       L   F +  ++ +++NP++    G +  
Sbjct: 191 DRWAIAEQIRRVSRLVTDFPE--IAEVDLNPVVATPEGAVAA 230



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG----ILSAV 346
           GA  N +D+ GG       A  ++   D  V  +++  +  I+   ++       +++  
Sbjct: 594 GAAGNPVDITGGEPPSTYEATIRLGLEDPRVHALVLGYWHTIVTPPMVFAELTARVVAEF 653

Query: 347 KEVKINIPLVMRLEG-ANVDIGNRLIAESGLNVITAID 383
           +E  I  P+V  L G   V+   + + E G+       
Sbjct: 654 RERGIEKPVVASLAGDVEVEEACQYLYERGVVAYPYTT 691


>gi|62181226|ref|YP_217643.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128859|gb|AAX66562.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715714|gb|EFZ07285.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|89099774|ref|ZP_01172647.1| UDP-N-acetylmuramyl tripeptide synthase [Bacillus sp. NRRL B-14911]
 gi|89085521|gb|EAR64649.1| UDP-N-acetylmuramyl tripeptide synthase [Bacillus sp. NRRL B-14911]
          Length = 695

 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA-DSK 67
           K +LR   +PV +G V  ++     A   +  P  V+K     G +G+G    + + D  
Sbjct: 41  KEMLRGTGIPVPEGEVAETLEGITEAAVRVGFP-LVIKP--LHGRQGQGVATGISSWDEL 97

Query: 68  GGVRVESSLKS 78
             V+   + + 
Sbjct: 98  NAVQKCLNEED 108


>gi|307246088|ref|ZP_07528170.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306853023|gb|EFM85246.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|303253251|ref|ZP_07339400.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248196|ref|ZP_07530224.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302647933|gb|EFL78140.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855373|gb|EFM87548.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|289643059|ref|ZP_06475190.1| carbamoyl-phosphate synthase, large subunit [Frankia symbiont of
           Datisca glomerata]
 gi|289507103|gb|EFD28071.1| carbamoyl-phosphate synthase, large subunit [Frankia symbiont of
           Datisca glomerata]
          Length = 1131

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P     V +    A +  + +  P+ V  S +  GGRG
Sbjct: 678 QVLARAGLPSPPHGVATFFDEARAVAERIGYPVLVRPSYVL-GGRG 722



 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 49/220 (22%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K ++       A+  + ++     +A +    P+ V  S    G             
Sbjct: 130 QAFKDIVAAVGGETARSAICTTPQECLAAAEEFSYPVVVRPSFTLGG------------- 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G         +     + + ++  ++           V VE+     +E  L L+ D
Sbjct: 177 --AGSGFAHDADELRRMAADGIAASPSSE-----------VLVEESVLGWKEFELELMRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           R +  V  + S +                    +DP +GV + D  ++   + L  +   
Sbjct: 224 R-ADNVVVVCSIEN-------------------VDP-MGVHTGDSVTVAPAMTLTDREYQ 262

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
              ++   + +A    D     I   +    GRL V++  
Sbjct: 263 QMRNMAIAVMRA-VGVDAGGCNIQFAVDPATGRLVVIEMN 301


>gi|224584506|ref|YP_002638304.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224469033|gb|ACN46863.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 87/271 (32%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|261404812|ref|YP_003241053.1| phosphoribosylamine/glycine ligase [Paenibacillus sp. Y412MC10]
 gi|261281275|gb|ACX63246.1| phosphoribosylamine/glycine ligase [Paenibacillus sp. Y412MC10]
          Length = 422

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KY++P A      +   A + ++    P+ VVK+   A G+              
Sbjct: 107 KDLLNKYSIPTAAYAKFDNYEEALAYLRQQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++     + +I    + +K  G  G   + V +E+  +  +E+ +   VD  +
Sbjct: 152 GVTVARTIEEAEQALSDI----MQSKVFGDAG---SRVVIEEFLE-GQEMSILAFVDGET 203

Query: 129 GMVA 132
               
Sbjct: 204 VKPM 207


>gi|16765971|ref|NP_461586.1| acetyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|161612629|ref|YP_001586594.1| hypothetical protein SPAB_00324 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168245085|ref|ZP_02670017.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168468065|ref|ZP_02701902.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194449788|ref|YP_002046660.1| CoA binding domain/acetyltransferase domain-containing protein
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|16421201|gb|AAL21545.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161361993|gb|ABX65761.1| hypothetical protein SPAB_00324 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408092|gb|ACF68311.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195628872|gb|EDX48286.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205336131|gb|EDZ22895.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|261247849|emb|CBG25678.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994792|gb|ACY89677.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159202|emb|CBW18717.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913645|dbj|BAJ37619.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321226006|gb|EFX51059.1| Protein acetyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323130989|gb|ADX18419.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332989580|gb|AEF08563.1| putative acetyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 87/271 (32%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|15613197|ref|NP_241500.1| phosphoribosylamine--glycine ligase [Bacillus halodurans C-125]
 gi|20139776|sp|Q9KF52|PUR2_BACHD RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|10173248|dbj|BAB04353.1| phosphoribosylglycinamide synthetase [Bacillus halodurans C-125]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++ YN+P     V +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKQVMKTYNIPTGSYEVFTSFDEAKAYVEAEGVPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ + ++L       + G  G+RV    +E+  +   EL L   V   
Sbjct: 152 -GVVVALTNEEAIAALDDMLNQ----DKFGGAGARV---VIEEYLE-GEELSLMAFVHGE 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TVIPMV 208


>gi|268678831|ref|YP_003303262.1| carbamoyl-phosphate synthase, large subunit [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268616862|gb|ACZ11227.1| carbamoyl-phosphate synthase, large subunit [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 1085

 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 34/168 (20%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + +       ++  A  A + +  PL +  S   AG             
Sbjct: 128 QAFKEAMLKIGMDLPISAYAYNMEDAYVAAEKIGFPLIIRASYTLAG------------- 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             GG  V  ++          L ++            +N + +E+     +E  + ++ D
Sbjct: 175 --GGSGVAYNIDEFKELAMAGLDAS-----------PINEILIEESLLGWKEYEMEVIRD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           R    +           IE +          + I P + +T ++   +
Sbjct: 222 RADNCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQRM 262


>gi|168700183|ref|ZP_02732460.1| phosphoribosylamine-glycine ligase [Gemmata obscuriglobus UQM 2246]
          Length = 455

 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 2/78 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+R  +VP A+  V      A   I+T   P+ VVK+   A G+G     +   ++ 
Sbjct: 108 AKELMRHADVPTAEFRVFDHPQPARDYIETRDYPV-VVKADGLAAGKG-VVVCKTGTEAT 165

Query: 68  GGVRVESSLKSVISDIRE 85
             V+   +          
Sbjct: 166 QAVKRIMTDAEFGQKAGR 183


>gi|260906704|ref|ZP_05915026.1| CoA-binding domain protein [Brevibacterium linens BL2]
          Length = 890

 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 25/225 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG-GRGKGRFKELPADSK 67
           +ALL  Y + V   +  +SV    +A + +  P+  +K+  +    R +     L  D  
Sbjct: 671 RALLSCYGIEVLPYITAASVEEGLAAAEEIGYPV-ALKAVTNVLRHRMELGGVRLNID-- 727

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                  S + +  D   I    +I +  G +   V+   V+  A       +    D  
Sbjct: 728 -------SPEELREDFTAI--QRIIRQVIGDSDPLVD---VQTMAPHGVPCVIRAGED-P 774

Query: 128 SGMVAFIASTQGGMD--IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                   S  G     + +V+        +   D +  + +     L     L      
Sbjct: 775 LLGPLLSFSLAGDTTELLGDVSHRVAPLTDREAGDMIKSIKAS--PRLFGYRGLPPMNID 832

Query: 186 DGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
             G++   L     ++   + E  I+P++  +     VL ++I  
Sbjct: 833 PLGNVLERL-SVLVERHPQIRELVIHPMVATET-EGHVLSARIDL 875


>gi|134299927|ref|YP_001113423.1| CoA-binding domain-containing protein [Desulfotomaculum reducens
           MI-1]
 gi|134052627|gb|ABO50598.1| CoA-binding domain protein [Desulfotomaculum reducens MI-1]
          Length = 701

 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 35/228 (15%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
             Y +  A   +  +   A S   T+  P+ +  +      +       +  ++   V  
Sbjct: 497 EAYGISTAPIKLAITPEEAISLADTMGYPVVLKIASPKIMHKSDVGGVRIGLNNADEVHS 556

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
                 +I +++  L S +      P G  V+ +          EL + +  D   G   
Sbjct: 557 AF--IDIIENVQRYLPSVI------PHGIEVSKMM-----PKGTELIVGMTRDVQFG--P 601

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD----------MLELQGQ 182
            IA   GG+        Y   +  +      G+T  ++AS+                +  
Sbjct: 602 LIAFGLGGI--------YVNLLKDVSFRLAKGITHAEIASMIAETKASTLLRGFRGERPA 653

Query: 183 ARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
             +   D+     K   D D +S LEINPL    +G +  LD KI+ D
Sbjct: 654 DLMSLIDMVARAAKLISDFDEISELEINPLFAYPDGYV-ALDIKITID 700



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 22/138 (15%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQD 306
            +  + N  G  +   D I+  G + A F                     +DV   A  D
Sbjct: 300 RVAIVTNAGGAGIVASDTIENTGLSMARFEKETLDNLRELLPTEANIYNPIDVVFDAKAD 359

Query: 307 KVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD 365
           + A A + I +D +V  ++I +        + +   I+    +          + G  + 
Sbjct: 360 RYAFALETILNDPNVDSVVILVCPTAAADPENIAGKIIELHNKHPDKPVFAAYMGGFALA 419

Query: 366 IGNRLIAESGLNVITAID 383
            G +++  + +   T  +
Sbjct: 420 EGVKMLTRAKIPTFTFPE 437


>gi|325288980|ref|YP_004265161.1| urea carboxylase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964381|gb|ADY55160.1| urea carboxylase [Syntrophobotulus glycolicus DSM 8271]
          Length = 1214

 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 69/222 (31%), Gaps = 50/222 (22%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP+ KG  +++++  A +A   +  P+                 K    
Sbjct: 117 HSAREMAEKAGVPLPKGTGLLANLEEALTAAGQIGYPVM---------------LKSTAG 161

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + +S+ +    +    L        G  +   Y+     I  +++     
Sbjct: 162 GGGIGMRICQNAESLCAAYESV--KYLAKTNFKDDGIFLES-YIARARHIEVQIF----- 213

Query: 125 DRTSGMVAFIASTQGGMDI---------EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
              S     IA  +    +         E  A   PQ I K           E    L  
Sbjct: 214 --GSRSGEIIAVGERDCSVQRRNQKVLEETPAPGLPQHIRKE--------MHEAAVRLAK 263

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
               Q    ++       LY     +    LE+N  + +++G
Sbjct: 264 SAGYQNAGTVEF------LYDT-QAQQFYFLEVNTRLQVEHG 298


>gi|281492079|ref|YP_003354059.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           lactis KF147]
 gi|281375762|gb|ADA65259.1| Phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           lactis KF147]
          Length = 412

 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A      S+  A  A     G   V+K+   A G+             
Sbjct: 107 AKSIMKKYGVPTADYATFDSLEPA-LAYLDEKGVPLVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   +++  S + +I         +G  G  V    +E+  D       S + D 
Sbjct: 153 -GVTVAFDIETAKSALADIF--------SGSQGKVV----IEEFLDGEEFSLFSFIHDG 198


>gi|319762840|ref|YP_004126777.1| phosphoribosylamine/glycine ligase [Alicycliphilus denitrificans
           BC]
 gi|330824919|ref|YP_004388222.1| phosphoribosylamine/glycine ligase [Alicycliphilus denitrificans
           K601]
 gi|317117401|gb|ADU99889.1| phosphoribosylamine/glycine ligase [Alicycliphilus denitrificans
           BC]
 gi|329310291|gb|AEB84706.1| phosphoribosylamine/glycine ligase [Alicycliphilus denitrificans
           K601]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 19/121 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA +R++ +P A     +   AA + +  L  P+ VVK+   A G+             
Sbjct: 106 SKAFMRRHGIPTADYDTFTDPAAAHAFVDRLGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+     +  +L            G+RV    +E+  +   E    +L D  
Sbjct: 152 -GVVVAMTLQEAHDAVDFMLVDNKYGVTHNEGGARV---VIEEFLE-GEEASFIVLCDGK 206

Query: 128 S 128
           +
Sbjct: 207 N 207


>gi|205353694|ref|YP_002227495.1| acyl-CoA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205273475|emb|CAR38452.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628799|gb|EGE35142.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 886

 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 87/271 (32%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPHQLEEWVEMKNGD 724


>gi|157382756|gb|ABV48815.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 101

 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 16/101 (15%)

Query: 270 GCMVNGAGLAMATMDIIKLY----GGAP---ANFLDVGGGADQDKVAAAFKIIT------ 316
             MV G G ++   D I  Y    GG+    AN+ +  GG    +     + +       
Sbjct: 1   WTMVAGGGASVVYADTIADYAEETGGSIKDLANYGEYSGGPTTGETKFYAETLFDLMTRH 60

Query: 317 SDSSVKGILINIFGGIMRCDVLVK---GILSAVKEVKINIP 354
            D   +  ++ I G I     + K   GI+ A++E    + 
Sbjct: 61  KDPQGRDKILIIGGAIANFTDVAKTFTGIIQALEEYADKLK 101


>gi|146296996|ref|YP_001180767.1| phosphoribosylamine--glycine ligase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410572|gb|ABP67576.1| phosphoribosylamine--glycine ligase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 420

 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +  A+  V  S   A + +        V+K+   A G+             
Sbjct: 105 AKDLMKKYGIKTARYNVFYSYEEALTFVNQNDKYPLVIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITK-------QTGPTGSRVNCVYVEDGADI 114
            GV +       ++ +  ++   +  K       +    G  ++   + DG DI
Sbjct: 152 -GVIIAQDKLEALNALNLMMKEKVFGKAGEKIVIEDYLKGEEISVFVISDGKDI 204


>gi|317496859|ref|ZP_07955189.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895871|gb|EFV18023.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 1066

 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  + +   A      L  P+ V  S +  G                G
Sbjct: 674 EILEECCIPRPKGTTVFTCEEALEVAHKLGYPVLVRPSYVLGG---------------QG 718

Query: 70  VRVESSLKSVISDIREILGST---LITKQTGPTGSRVNCVYVEDGADI 114
           +++  S + + + +  I        I       G  V    V DG DI
Sbjct: 719 MQIAVSDEDITAFMEVINRYEQEHPILIDKYLVGKEVEVDAVCDGTDI 766


>gi|268317337|ref|YP_003291056.1| acetyl coenzyme A synthetase (ADP forming), alpha domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262334871|gb|ACY48668.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 929

 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 26/234 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+AK +L  Y +PV    +  +   A +A + L  P+ V+K             K  
Sbjct: 509 LTEYEAKQVLEAYCLPVTPTRLARTADEAVAAAEELGYPV-VLKLH---------SLKIT 558

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYL 120
                GGV++       +    + +   L  +         + V V+         EL +
Sbjct: 559 HKTDVGGVQLNLDSPEAVRRAFDTIRRNLEERGQADAF---DGVTVQPMVRARDGYELII 615

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV----TSEDVASLCDM 176
              +D   G V    +  GG  +E       + +    ++  +       ++   +L  +
Sbjct: 616 GSTIDPQFGPVLLFGA--GGTLVEVYRD---RALGLPPLNTTLARRMMEQTKVYRALQGV 670

Query: 177 LELQGQARIDGGDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
                        L     +   ++  +  +++NPL+   + ++  LD++I   
Sbjct: 671 RGRPPVNLDRLEKLMVRFSQLVVEQPWIREIDVNPLLAAPD-QIVALDARIVLH 723



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 26/137 (18%)

Query: 271 CMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQDKVA 309
            + N  G  +   D +   GG  A                     N +D+ G AD ++ A
Sbjct: 323 ILTNAGGAGVLATDALVQGGGQLAELSEETKKKLDEFLPPHWSHGNPVDILGDADPERYA 382

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCD--VLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
            A ++  +D +  G+L+ I       D     + +    +  K    L   + G  V  G
Sbjct: 383 KALEVTLADENSDGLLV-ILTPQAMTDPTQTAEQLRRFAQSRKP--ILASWMGGVEVAAG 439

Query: 368 NRLIAESGLNVITAIDL 384
            +++  +G+      D 
Sbjct: 440 KKILNRAGIPTFQYPDT 456


>gi|167765823|ref|ZP_02437876.1| hypothetical protein CLOSS21_00314 [Clostridium sp. SS2/1]
 gi|167712540|gb|EDS23119.1| hypothetical protein CLOSS21_00314 [Clostridium sp. SS2/1]
 gi|291559181|emb|CBL37981.1| carbamoyl-phosphate synthase, large subunit [butyrate-producing
           bacterium SSC/2]
          Length = 1066

 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  + +   A      L  P+ V  S +  G                G
Sbjct: 674 EILEECCIPRPKGTTVFTCEEALEVAHKLGYPVLVRPSYVLGG---------------QG 718

Query: 70  VRVESSLKSVISDIREILGST---LITKQTGPTGSRVNCVYVEDGADI 114
           +++  S + + + +  I        I       G  V    V DG DI
Sbjct: 719 MQIAVSDEDITAFMEVINRYEQEHPILIDKYLVGKEVEVDAVCDGTDI 766


>gi|195952477|ref|YP_002120767.1| phosphoribosylglycinamide formyltransferase 2 [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932089|gb|ACG56789.1| phosphoribosylglycinamide formyltransferase 2 [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 394

 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 32/168 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +K   +++    + A K L  P+ VVK  + + G+G+             V  E  
Sbjct: 124 GLPTSKYKFVNTFEELKQAAKELGYPV-VVKPVMSSSGKGQS-----------IVYKEQD 171

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+      RE                    + VE+  D   E  +++L  RT        
Sbjct: 172 LEKAFYIAREKARGDS------------KELIVEEFIDFDYE--ITMLTVRTKNQGILFC 217

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDMLELQG 181
              G + +E    DY +      +D  + +        ++ + L   G
Sbjct: 218 PPIGHIQVE---GDYYESWQPHPMDDKL-LQKAQNIARTVVEGLGGYG 261


>gi|159037472|ref|YP_001536725.1| carbamoyl-phosphate synthase, large subunit [Salinispora arenicola
           CNS-205]
 gi|157916307|gb|ABV97734.1| carbamoyl-phosphate synthase, large subunit [Salinispora arenicola
           CNS-205]
          Length = 1115

 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 42/176 (23%)

Query: 9   KALLRKYNVP---------VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           K ++ K  V          V +  V  S+      I  L  P  +         R     
Sbjct: 133 KDIVAKAGVRIGVEDPAALVPRSRVCHSMDEVRDTIAELGLPAVI---------RPSFTM 183

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
             L +       +  +   +       L ++            V+ V +E+     +E  
Sbjct: 184 GGLGSG------MAHTDADLERIAGAGLAAS-----------PVHEVLIEESVLGWKEYE 226

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           L L+ DR   +V           IE V          + + P + +T  +   + D
Sbjct: 227 LELMRDRHDNVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQRMRD 275



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ALL +  +        +S   A +    +  P+ V  S +  GGRG
Sbjct: 697 ALLARAGLRAPAHGTATSYDEARAIADEIGYPVLVRPSYVL-GGRG 741


>gi|329954774|ref|ZP_08295791.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides clarus
           YIT 12056]
 gi|328526878|gb|EGF53889.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides clarus
           YIT 12056]
          Length = 388

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK    +S+   ++A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYFYATSLDELKAAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|307332432|ref|ZP_07611497.1| phosphoribosylamine/glycine ligase [Streptomyces violaceusniger Tu
           4113]
 gi|306881924|gb|EFN13045.1| phosphoribosylamine/glycine ligase [Streptomyces violaceusniger Tu
           4113]
          Length = 421

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAGVPTARAYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|261879233|ref|ZP_06005660.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella bergensis
           DSM 17361]
 gi|270334061|gb|EFA44847.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella bergensis
           DSM 17361]
          Length = 393

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 32/187 (17%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           R+  +  A+     +    + A   +  P  VVK  + + G G+          +     
Sbjct: 112 RELGLRTAQYFYAKTFEEFKHAADQIGYPC-VVKPLMSSSGHGQCYVHNEEELEEA---F 167

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
             +++    D++E                    V +E+  D   E  L L + + +G   
Sbjct: 168 REAMEEGRGDVKE--------------------VIIEEFIDFDSEFTL-LTITQQNGTTL 206

Query: 133 F---IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL--CDMLELQGQARIDG 187
           F   I   Q G D  E     P  I    +     +  E   +L    +  ++      G
Sbjct: 207 FCPPIGHVQKGGDYRESW--MPFHIPDEALKTAEHMADEVTKALTGAGLWGVEFFLTKQG 264

Query: 188 GDLFPNL 194
             +F  L
Sbjct: 265 EVIFSEL 271


>gi|269957904|ref|YP_003327693.1| phosphoribosylamine/glycine ligase [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306585|gb|ACZ32135.1| phosphoribosylamine/glycine ligase [Xylanimonas cellulosilytica DSM
           15894]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 25/106 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V ++V    +A+     P YVVK    A G+             
Sbjct: 105 AKEVMAAAGVPTAMAHVCTTVDEVAAALDAFGAP-YVVKDDGLAAGK------------- 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V SS +  ++   E L         G  G  V    VE+  D
Sbjct: 151 -GVVVTSSREEALAHGAEAL------TARGLDGRVV----VEEYLD 185


>gi|149182709|ref|ZP_01861175.1| phosphoribosylamine--glycine ligase [Bacillus sp. SG-1]
 gi|148849569|gb|EDL63753.1| phosphoribosylamine--glycine ligase [Bacillus sp. SG-1]
          Length = 379

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A     S   +A   +     P+ V+K+   A G+             
Sbjct: 106 AKELMKKYSIPTAAYETFSDFESAREYVLKSGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S+   I  + ++L            G     V +E+  +   E  L   VD  
Sbjct: 152 -GVVVAQSVDEAIDALEDMLLQAKF-------GKASAKVVIEEFLE-GEEFSLMAFVDGE 202

Query: 128 SGMVA 132
                
Sbjct: 203 KVYPM 207


>gi|48477608|ref|YP_023314.1| acyl-CoA synthetase [Picrophilus torridus DSM 9790]
 gi|48430256|gb|AAT43121.1| acyl-CoA synthetase [Picrophilus torridus DSM 9790]
          Length = 657

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 73/226 (32%), Gaps = 30/226 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I +++A  ++  Y +   +  +      A+     +  P+ +               + L
Sbjct: 462 IRDFEALKIMELYGIKTPRYGIAMDAETAQKVADDIGYPVVM----------KISGDEPL 511

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 GV +      V      +                   V +E+  +   E+++  
Sbjct: 512 HKTEMNGVYLNVERDMVKDVFNRLNYK---------------RVLIEEQLNGA-EIFIGG 555

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           + D   G         GG+ +E + +           +    +   +++ +    + +  
Sbjct: 556 IKDPVFGHTVVAG--IGGIYVEVLKRLAYALSPVSEEEAEYLLNESNISKIITARK-RNY 612

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            +        N+ +   D ++S L+INPLI+ + G    +D ++  
Sbjct: 613 DKNSIIRAISNVSRMIVDLNISQLDINPLIVNETG-AYAVDVRMII 657


>gi|54302601|ref|YP_132594.1| putative acetyltransferase [Photobacterium profundum SS9]
 gi|46916025|emb|CAG22794.1| putative acetyltransferase [Photobacterium profundum SS9]
          Length = 909

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 79/244 (32%), Gaps = 30/244 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++ + +L  Y        + S    A    + +  P+ +         + +       ++
Sbjct: 502 HEVRPVLESYGFKTLPTWIASDPAEAVHIAEQIGYPVAI---------KLRSPDIRHKSE 552

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYLSLLV 124
             G +    +   V +  + IL    +   +    G  V  +         +EL +S+  
Sbjct: 553 VHGVLLHLRTADEVANGAQAILDRVSMNYPSARIDGLLVQRM---ASRSGAQELRVSVHN 609

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLE----- 178
           D   G V  +       +I + A         + I PL + +    V +     +     
Sbjct: 610 DSVFGPVILMGEDAAAWNIHKDAA--------VAIPPLNMALARYMVINAIKTGKIRQRS 661

Query: 179 -LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
            L+        +L   + +   D  ++   +I+PL+      + V+D+ ++    +  + 
Sbjct: 662 SLEQIDIPALCNLLVKISQLIIDCPEIVDFDIHPLLASGT-DMTVIDASMTLHPFSGDKQ 720

Query: 237 LDIQ 240
             + 
Sbjct: 721 ARLA 724


>gi|13432249|sp|Q9ZF44|PUR2_LACLA RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|326406981|gb|ADZ64052.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           lactis CV56]
          Length = 412

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A      S+  A  A     G   V+K+   A G+             
Sbjct: 107 AKSIMKKYGVPTADYATFDSLEPA-LAYLDEKGVPLVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   +++  S + +I         +G  G  V    +E+  D       S + D 
Sbjct: 153 -GVTVAFDIETAKSALADIF--------SGSQGKVV----IEEFLDGEEFSLFSFIHDG 198


>gi|218886868|ref|YP_002436189.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757822|gb|ACL08721.1| GCN5-related N-acetyltransferase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 898

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 94/277 (33%), Gaps = 36/277 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A A+L  Y +PVA+   + +   A +A   +  P+  +K +     R            
Sbjct: 496 EAHAVLTAYGIPVAETRHVKTPREAVAAAAEIGYPV-ALKVESPDVPR---------TSL 545

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGP--TGSRVNCVYVEDGADILRELYLSLLV 124
            GGV +  +    + D      + +  +  G    G  V  +          EL +    
Sbjct: 546 AGGVALNLASDEEVMDAALSTANNVCDQVPGARMEGYAVQRM---CRLAGAHELAVETAT 602

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-VASLCDMLELQGQA 183
           D   G    I   QGG  + EV  D    +  L +     + S   V  L      +   
Sbjct: 603 DPVFG--PIIRFGQGG-SMAEVLADRQTALPPLNMGLAQELVSRTRVYRLLRGSGHKAHV 659

Query: 184 RIDGGDLFP-NLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF--------DDNAL 233
            +D   L    + +   D  ++  LEI+PL +  +G +  LD+ +          D  A+
Sbjct: 660 NLDAVRLLLCKVSQLIIDIPEIFELEIDPLFVDADG-VVALDAHMRIAWSTTTGTDQLAI 718

Query: 234 YRHL----DIQELRDVSEED--SREIEAKQHNLSYIA 264
             +     +   LRD    D      E +  +  ++ 
Sbjct: 719 RPYPRELEECVALRDGRHVDLLPIRPEDEPEHWEFVE 755


>gi|153813957|ref|ZP_01966625.1| hypothetical protein RUMTOR_00164 [Ruminococcus torques ATCC 27756]
 gi|317501485|ref|ZP_07959683.1| carbamoylphosphate synthase large subunit [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|331088043|ref|ZP_08336964.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145848353|gb|EDK25271.1| hypothetical protein RUMTOR_00164 [Ruminococcus torques ATCC 27756]
 gi|316897114|gb|EFV19187.1| carbamoylphosphate synthase large subunit [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|330408999|gb|EGG88458.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 1059

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY 43
           K L  K   PV   +V ++   A  A KT+  P+ 
Sbjct: 133 KELCEKLGEPVLPSLVANTAEEALQAAKTIGYPVV 167



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL   ++P  KG  ++++     A   +  P+ V  S +  G             +   
Sbjct: 669 KLLAALSIPQPKGQAVTNIEDGVKAAAAIGYPVLVRPSFVLGGR------------AMQI 716

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           V  E  L+  +    EI     +       G  V    + DG D+
Sbjct: 717 VAKEEQLRQYLKTAVEINEEKPVLVDHYIRGKEVEIDGICDGQDV 761


>gi|119715247|ref|YP_922212.1| GCN5-related N-acetyltransferase [Nocardioides sp. JS614]
 gi|119535908|gb|ABL80525.1| GCN5-related N-acetyltransferase [Nocardioides sp. JS614]
          Length = 883

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 73/225 (32%), Gaps = 25/225 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y +    G V+    AA  A   L  P+ V        GR      E      G  
Sbjct: 669 LLAAYGLD-PLGEVVVGADAAVEAAGWLGYPVAV-----KVAGREVPHKSERGLVKVGLA 722

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
               S + V + I          ++ G T   V    V  G +I     L ++ D   G 
Sbjct: 723 ----SPEEVAAAIAG------FEQELGETAVPVLVQNVASGVEIA----LGVVRDPRFGP 768

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQARIDGGD 189
           +  +A+  GG+ +E               D    V S      L               D
Sbjct: 769 LVMVAA--GGVAVEVWKDRTFLLPPVTRSDAQRAVRSLRIWPLLEGYRGSPPADVDGLVD 826

Query: 190 LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNAL 233
           L   L     D   ++ +++NP+++       V+D K+  D +A+
Sbjct: 827 LLVELGALAEDVPQIADVDLNPVLVGPE-SCAVVDVKVRLDRSAV 870


>gi|119485029|ref|ZP_01619414.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Lyngbya sp. PCC 8106]
 gi|119457257|gb|EAW38382.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Lyngbya sp. PCC 8106]
          Length = 1079

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V      ++S++  A +  + +     +++     GG G G           
Sbjct: 133 KQAMERIGVACCPSGIVSNMDEARTVAQQIGSYPLIIRPAFTMGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +         L ++            V+ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEYEELASGGLDAS-----------PVSQILVEQSLIGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T ++   L D 
Sbjct: 227 DNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 268


>gi|15643213|ref|NP_228257.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Thermotoga
           maritima MSB8]
 gi|4980965|gb|AAD35542.1|AE001723_12 phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Thermotoga maritima MSB8]
          Length = 380

 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+K  +PV +  ++  +    S ++    P+ V K++            +   D + 
Sbjct: 105 KEFLKKNGIPVPEYKLVKDLE---SDVREFGFPV-VQKARKGGYDGRGVFIIKNEKDLEN 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            ++ E+ L+  +   +E+       ++       V  +Y ++ A+I
Sbjct: 161 AIKGETYLEEFVEIEKELAVMVARNEKGEIACYPVVEMYFDEDANI 206


>gi|312144093|ref|YP_003995539.1| carbamoyl-phosphate synthase, large subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311904744|gb|ADQ15185.1| carbamoyl-phosphate synthase, large subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 1072

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 54/187 (28%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    +  +V  A    K +  P+ V  +                  + G
Sbjct: 133 KELMDQIGEPVLDSKIAENVEQAAEIAKKIGFPVIVRPA-------------YTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +L+ +          +LI             V +E      +E+   ++ D   
Sbjct: 180 GV--ADNLEELKEITIRGFKHSLIG-----------QVLIEKSIKGWKEIEYEVMRDAND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E            +++ P   ++ ++          +   L ++G
Sbjct: 227 NCIVV-------CNMENFDPVGVHTGDSIVVAPSQTLSDKEYQMFRSSALKIIRALGIEG 279

Query: 182 QARIDGG 188
              +   
Sbjct: 280 GCNVQYA 286



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF--KELPADSK 67
            LL + ++P   G   +S+  AE     +  P+ V  S +  G   +  +  KEL    K
Sbjct: 677 KLLNELDIPTPAGKTAASLLEAEKIAAEIKYPVLVRPSYVLGGRAMEVVYNEKELEEYMK 736

Query: 68  GGVRVESS 75
             V+V   
Sbjct: 737 NAVKVSPD 744


>gi|257467246|ref|ZP_05631557.1| phosphoribosylamine--glycine ligase [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315918374|ref|ZP_07914614.1| phosphoribosylamine-glycine ligase [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313692249|gb|EFS29084.1| phosphoribosylamine-glycine ligase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 408

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  AK     +   A + I+    P  VVK+   A G+             
Sbjct: 92  SKDFMKKYGVKTAKYENFKNAEEAFAYIEKQDYP-LVVKASGLAAGK------------- 137

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  SL+     ++EI    ++ K     G+ V    +E+  + +    LS+ 
Sbjct: 138 -GVIICQSLEEAKKAVQEI----MVDKVFQDAGAEV---VIEEFLEGVEASILSIT 185


>gi|238607237|ref|XP_002396924.1| hypothetical protein MPER_02737 [Moniliophthora perniciosa FA553]
 gi|215470385|gb|EEB97854.1| hypothetical protein MPER_02737 [Moniliophthora perniciosa FA553]
          Length = 186

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 17/127 (13%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           I +   A        G   V K       RGK     L            S +  ++ I 
Sbjct: 53  ILTPADALPQWVNESGVKLVAKPDQLIKRRGKAGLLALNK----------SKEEAVAWIA 102

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLVDRTSGMVAFIASTQGGMD 142
           E  G     +        +    +E         E Y+ +   R    + F  + +GG+D
Sbjct: 103 ERAGKIQKVESVSG---PLTSFILEPFLPHPSNTEYYVCINSSREYDTILF--THEGGVD 157

Query: 143 IEEVAKD 149
           + +V   
Sbjct: 158 VGDVDAR 164


>gi|190150500|ref|YP_001969025.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307263843|ref|ZP_07545448.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915631|gb|ACE61883.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870832|gb|EFN02571.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 428

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|169246082|gb|ACA51059.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase isoform 1
           (predicted) [Callicebus moloch]
          Length = 1010

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  + +     ++EI+       Q    G     + +E+  D
Sbjct: 157 -GVIVAKTKEEACKAVQEIM-------QEKAFGVAGETIVIEELLD 194


>gi|91203298|emb|CAJ72937.1| strongly similar to glycinamide ribonucleotide synthetase (GARS,
           glycinamide ribonucleotide synthetase) [Candidatus
           Kuenenia stuttgartiensis]
          Length = 435

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++K+++P A   V   +  AE  ++    P+ V+K+   A G+             
Sbjct: 120 AKTIMKKHSIPTADFRVFEDIKMAEKYLEKCFAPI-VIKADGLAKGK------------- 165

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+     ++EI    ++ +  G  G   + V +E+      E  +S+L    
Sbjct: 166 -GVFVCKTLEEAKEHLQEI----MVERIFGNAG---DRVVIEECL-HGEE--VSILAITD 214

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
              +  ++S +    I E  K
Sbjct: 215 GQTIIPLSSARDHKAIYEGNK 235


>gi|82703368|ref|YP_412934.1| cyanophycin synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411433|gb|ABB75542.1| Cyanophycin synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 856

 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL    VPV  G  ++S   A  A   +  P+ VVK Q   G +G+G    L +  +   
Sbjct: 211 LLDAAGVPVTPGRPVTSAEDAWVATCEIGSPV-VVKPQ--DGNQGRGVRVNLVSREQ--- 264

Query: 71  RVESSLKSVISDIREILGSTLITK 94
                +++  +   E+ G  ++ +
Sbjct: 265 -----VEAAYAVAVEVTGKVMVER 283


>gi|224129712|ref|XP_002328784.1| predicted protein [Populus trichocarpa]
 gi|222839082|gb|EEE77433.1| predicted protein [Populus trichocarpa]
          Length = 528

 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY +P AK    +   +A+  I+    P+ V+K+   A G+              
Sbjct: 201 KNLCDKYKIPTAKYQTFTDPSSAKQYIEDQGAPI-VIKADGLAAGK-------------- 245

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L+     +  +L    +    G  G    CV VE+  +     + +L+
Sbjct: 246 GVIVAMTLEEAYEAVDSML----VKSVFGSAGC---CVVVEEFLEGEEASFFALV 293


>gi|195977125|gb|ACG63673.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase isoform 1
           (predicted) [Otolemur garnettii]
          Length = 1010

 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 23/116 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I     P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFIMNANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV V  + +     ++EI+        G T++ ++    G  V+C+   DG  + 
Sbjct: 157 -GVIVAKNKEEACKAVQEIMQEKAFGTAGETIVIEELL-EGEEVSCLCFTDGKTVA 210


>gi|149173901|ref|ZP_01852530.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Planctomyces maris DSM 8797]
 gi|148847431|gb|EDL61765.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Planctomyces maris DSM 8797]
          Length = 379

 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 14/75 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR   +PV    V+ SV   ++A+  L  P  V+KS                 D KG V+
Sbjct: 114 LRDAGIPVTPFAVVRSVEELKTALSELGYP-AVLKS------------ATSGYDGKGQVK 160

Query: 72  VESSLKSVISDIREI 86
           +  S +   +  +E+
Sbjct: 161 I-DSPEEAEAAWKEV 174


>gi|15673495|ref|NP_267669.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           lactis Il1403]
 gi|12724511|gb|AAK05611.1|AE006382_4 phosphoribosylamine-glycine ligase [Lactococcus lactis subsp.
           lactis Il1403]
          Length = 413

 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A      S+  A  A     G   V+K+   A G+             
Sbjct: 108 AKSIMKKYGVPTADYATFDSLEPA-LAYLDEKGVPLVIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   +++  S + +I         +G  G  V    +E+  D       S + D 
Sbjct: 154 -GVTVAFDIETAKSALADIF--------SGSQGKVV----IEEFLDGEEFSLFSFIHDG 199


>gi|307261655|ref|ZP_07543322.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868647|gb|EFN00457.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|193215113|ref|YP_001996312.1| carbamoyl-phosphate synthase L chain ATP-binding [Chloroherpeton
           thalassium ATCC 35110]
 gi|193088590|gb|ACF13865.1| Carbamoyl-phosphate synthase L chain ATP-binding [Chloroherpeton
           thalassium ATCC 35110]
          Length = 622

 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 42/204 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL + N+P     + +S+  A      +  P+ V  S +  G                 
Sbjct: 219 ELLDRLNIPHPDYGIAASIDEALELTDRIGYPVLVRPSYVLGG---------------RA 263

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  +  S+   I + L   +++++        + + ++   +  +E  +  L D T  
Sbjct: 264 MKIIYNDDSLREYIEQAL---VVSEE--------HPLLIDRFLEHAKEFDIDALADETDC 312

Query: 130 MVAFIASTQGGMDIEEVAKDY---PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           +++ I        +          P      +I+ +   +      +   L + G   I 
Sbjct: 313 VISGIMEHIEAAGVHSGDSTSVLPPYNASTTVIEQMKEYS----RKMAQALGVVGLVNIQ 368

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                     A  D+++ ++E+NP
Sbjct: 369 F---------AVQDEEVFVIEVNP 383


>gi|223935339|ref|ZP_03627257.1| Carbamoyl-phosphate synthase L chain ATP-binding [bacterium
           Ellin514]
 gi|223896223|gb|EEF62666.1| Carbamoyl-phosphate synthase L chain ATP-binding [bacterium
           Ellin514]
          Length = 501

 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 43/151 (28%), Gaps = 29/151 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K  + V       ++  A +  + +     +++                      
Sbjct: 143 KDLMIKIGLDVPISGTAHNLEEARAVAEKIGRFPLIIRP--------------AYTLGGT 188

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  + +      +            G   S V+ + VE+     +E  + ++ DR  
Sbjct: 189 GGGIGYNREEFEEIAKR-----------GIELSPVSEILVEESLLGWKEYEMEVMRDRAD 237

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159
                I S +   + + +       I    I
Sbjct: 238 NC-VIICSIE---NFDPMGVHTGDSITVAPI 264


>gi|225163428|ref|ZP_03725745.1| acetyl-CoA carboxylase, biotin carboxylase [Opitutaceae bacterium
           TAV2]
 gi|224801970|gb|EEG20249.1| acetyl-CoA carboxylase, biotin carboxylase [Opitutaceae bacterium
           TAV2]
          Length = 454

 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 82/268 (30%), Gaps = 33/268 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +RK  VP+  G    I S   A    + +  P+ ++K+    GGRG          
Sbjct: 119 AKDTVRKAKVPIVPGSDGPIESEAEAIKLARKIGYPV-IIKAVAGGGGRGM-------RI 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +   V +        S+  +  G+                VYVE   +  R +   +L D
Sbjct: 171 AHNDVSLGKEFNVARSEAEKAFGNG--------------SVYVEKYIEKPRHIEFQILAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
                   +   +    ++   +   ++     + P L            +    +    
Sbjct: 217 SHGK---VVHLGERDCSVQRRHQKLIEESPSPFLTPSLRKEMGRHAVRAAEAASYENAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELR 243
           I+        Y  F + +  +   +P+     G  L     K++  +   +   DI    
Sbjct: 274 IEFLVDAKGKYY-FIEMNTRIQVEHPVTEEVTGIDLIKEQIKVAMGEKLSFDQGDITF-- 330

Query: 244 DVSEEDSREIEAKQHNLSYIALDGNIGC 271
                    I A+    +++   G IG 
Sbjct: 331 -TKHAIECRINAEDPARNFVPSPGTIGL 357


>gi|3892883|emb|CAA04374.1| purD [Lactococcus lactis]
          Length = 412

 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A      S+  A  A     G   V+K+   A G+             
Sbjct: 107 AKSIMKKYGVPTADYATFDSLEPA-LAYLDEKGVPLVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   +++  S + +I         +G  G  V    +E+  D       S + D 
Sbjct: 153 -GVTVAFDIETAKSALADIF--------SGSQGKVV----IEEFLDGEEFSLFSFIHDG 198


>gi|325262451|ref|ZP_08129188.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits
           [Clostridium sp. D5]
 gi|324032283|gb|EGB93561.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits
           [Clostridium sp. D5]
          Length = 708

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 18/219 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K  L+++ V  A  ++ +S   AE A +   G  + +K         +      
Sbjct: 483 LSEHESKMSLKEFGVAAADEIIAASREEAEKAAERFRGA-FAMKI--------ESAEILH 533

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D  G +      K        I     + K     G  +N + +        E+ + +
Sbjct: 534 KSDVGGVILNLKDAKEAGDAYDRI--MENVKKHCPQAG--INGILMAPMLKTGLEMIIGV 589

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK-LLIDPLIGVTSEDVASLCDMLELQG 181
             D   G V  +      +++ +    YP  + K   ++ L  + +  +  L        
Sbjct: 590 NNDPQFGPVVMVGMGGIFVEVFKDVSVYPAPLNKTEAMNMLQSLKAYKL--LNGYRGGDK 647

Query: 182 QARIDGGDLFPNL--YKAFCDKDMSLLEINPLIIMKNGR 218
                  D   ++  + A     +  L+INPL +   G 
Sbjct: 648 YDIDALCDTIVSVGNFAAANKDSLKELDINPLFVYPEGE 686


>gi|307257228|ref|ZP_07538999.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864270|gb|EFM96182.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|254797248|ref|YP_003082090.1| phosphoribosylamine--glycine ligase [Neorickettsia risticii str.
           Illinois]
 gi|254590484|gb|ACT69846.1| phosphoribosylamine--glycine ligase [Neorickettsia risticii str.
           Illinois]
          Length = 429

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +     VPVAK    SS++  +  I+++     V+K+   A G+             
Sbjct: 115 AKEIAEMNGVPVAKYSFCSSINNLKKQIESVGSFPLVIKADGLASGK------------- 161

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++   +     +L         G  G     + +E+        Y  +LVD  
Sbjct: 162 -GVIVCETMGEALEAGEAMLNGLF-----GEAG---RNIIIEEFLYGQELSYF-VLVDGQ 211

Query: 128 SGMVA 132
           + +  
Sbjct: 212 TILPI 216


>gi|240143742|ref|ZP_04742343.1| phosphoribosylamine--glycine ligase [Roseburia intestinalis L1-82]
 gi|257204301|gb|EEV02586.1| phosphoribosylamine--glycine ligase [Roseburia intestinalis L1-82]
          Length = 425

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A     +S   A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYHIPTAAYENFTSAEEALAYLETAKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+   + ++EI    +  K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKAGVKEI----MEDKKFGTAG---NTMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GKTIKIMSSAQD 212


>gi|218248721|ref|YP_002374092.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 8801]
 gi|257061783|ref|YP_003139671.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 8802]
 gi|218169199|gb|ACK67936.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 8801]
 gi|256591949|gb|ACV02836.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 8802]
          Length = 423

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  VP+A+G   +    A++ I     P+ VVK+   A G+             
Sbjct: 108 AKTLMAEAGVPIAQGQSFTDPITAKAYITQHGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++++   S +  +        Q G +   V    V +   IL       L D  
Sbjct: 154 -GVIVAATVEEAQSAVDSLF-------QEGFSLIVVEECLVGEEVSIL------ALSDGI 199

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 200 TVRPLLPA 207


>gi|88854873|ref|ZP_01129539.1| phosphoribosylamine-glycine ligase [marine actinobacterium
           PHSC20C1]
 gi|88816034|gb|EAR25890.1| phosphoribosylamine-glycine ligase [marine actinobacterium
           PHSC20C1]
          Length = 418

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 15/104 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   NVP  +   + S+  A  A+     P YVVK+   A G+             
Sbjct: 108 AKRIMDAANVPTGRAHRVGSIDEALEALDEFGAP-YVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
            GV V     + +   +  L    +  +    G  V+   + DG
Sbjct: 154 -GVLVTGERNAAVDHAKHWLTYGSVLVEEYLAGEEVSLFLLSDG 196


>gi|32033890|ref|ZP_00134161.1| COG0151: Phosphoribosylamine-glycine ligase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208640|ref|YP_001053865.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae L20]
 gi|165976600|ref|YP_001652193.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|307250428|ref|ZP_07532375.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|126097432|gb|ABN74260.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876701|gb|ABY69749.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306857557|gb|EFM89666.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|266622113|ref|ZP_06115048.1| phosphoribosylamine--glycine ligase [Clostridium hathewayi DSM
           13479]
 gi|288866182|gb|EFC98480.1| phosphoribosylamine--glycine ligase [Clostridium hathewayi DSM
           13479]
          Length = 425

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 40/222 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A      +  AA   ++T   P+ V+K+   A G+             
Sbjct: 107 SKDLMKKYHIPTAGYETFDTPEAALQYLETAEMPI-VLKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +     +R +    ++ KQ G  G   + + VE+         +S+L    
Sbjct: 153 -GVLICNTREEAREGVRTL----MLDKQFGSAG---DRIVVEEFMTGRE---VSVLSFVD 201

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
              +  + S Q          G++   +    P   +   +D              D ++
Sbjct: 202 GDTIKIMTSAQDHKRAKNGDQGLNTGGMGTFSPSPFYTEEVDAFCRKYVYQAT--VDAMK 259

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
            +G+       +F  L     +K   +LE N        ++ 
Sbjct: 260 AEGRPFKGI--IFFGL--MLTEKGPKVLEYNARFGDPETQVV 297


>gi|260424815|ref|ZP_05733378.2| phosphoribosylamine--glycine ligase [Dialister invisus DSM 15470]
 gi|260403279|gb|EEW96826.1| phosphoribosylamine--glycine ligase [Dialister invisus DSM 15470]
          Length = 422

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 24/138 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A     +    A S IK       V+K+   A G+             
Sbjct: 100 AKNLMKKYKIPTAAYETFTDEEKAVSYIKKRKKYPLVIKADGLASGK------------- 146

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  +  +R +L      K  G  G     V +E+  +       S+L    
Sbjct: 147 -GVVIAETEEQAVQAVRGMLE----GKTFGSAG---ESVVIEEFMEGEE---ASVLCFTD 195

Query: 128 SGMVAFIASTQGGMDIEE 145
              +  + S Q    I +
Sbjct: 196 GNTIVPMISAQDHKRISD 213


>gi|167427273|gb|ABZ80252.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase isoform 1
           (predicted) [Callithrix jacchus]
          Length = 841

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+         A S I     P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFRKPEEACSFIMNADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  + +     ++EI                +  + V +   
Sbjct: 157 -GVIVAKTKEEACKAVQEI--MQEKAFGVAGETIVIEELLVGEEVS 199


>gi|222054522|ref|YP_002536884.1| phosphoribosylamine/glycine ligase [Geobacter sp. FRC-32]
 gi|221563811|gb|ACM19783.1| phosphoribosylamine/glycine ligase [Geobacter sp. FRC-32]
          Length = 422

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY+VP A   V + V  A + I  +  P+ VVK+   A G+             
Sbjct: 106 SKDLMKKYHVPTAAYEVFTEVGPAITFIDKVGIPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +    ++ + ++L         G  G   + V +E+        +L+  
Sbjct: 152 -GVIIAQTRDEAVAAVTDML----SGNAFGTAG---SRVVIEEFLKGEEASFLAFT 199


>gi|50294352|ref|XP_449587.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528901|emb|CAG62563.1| unnamed protein product [Candida glabrata]
          Length = 1834

 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 75/243 (30%), Gaps = 36/243 (14%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + +   VP V    ++ +   A +  K +  P+ V KS    GG G  +      
Sbjct: 745 HSAREVAKSAGVPLVPGSPLVKNADEAFTIAKNIGYPVMV-KSTAGGGGIGLQKVDNEQD 803

Query: 65  DSKG---------------GVRVESSLKSVISDIREIL----GSTLITKQTGPTGSRVNC 105
             K                GV +E  + +      +I+    G TL   +   +  R N 
Sbjct: 804 MRKAFETVKHQGSSYFGDSGVFMEKFIDNARHVEVQIMGDGKGKTLALGERDCSLQRRNQ 863

Query: 106 VYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID----- 160
             +E+             + R +      A+ + G  +        + I+    D     
Sbjct: 864 KVIEETPAPN--------LPRETRQKMLTAAERLGAYLNYRGAGTVEFIYDEQRDQFYFL 915

Query: 161 -PLIGVTSED-VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
                +  E  +  +   L+L          + P+L +    ++ + +E+          
Sbjct: 916 EVNTRLQVEHPITEMVTGLDLVEWMIKISAGVMPSLDEFNISQNGASIEVRVYAENPLKD 975

Query: 219 LRV 221
            R 
Sbjct: 976 FRP 978


>gi|303250078|ref|ZP_07336280.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252813|ref|ZP_07534703.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302651141|gb|EFL81295.1| phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859712|gb|EFM91735.1| Phosphoribosylamine--glycine ligase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|298244064|ref|ZP_06967871.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Ktedonobacter racemifer DSM 44963]
 gi|297557118|gb|EFH90982.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Ktedonobacter racemifer DSM 44963]
          Length = 387

 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 33/123 (26%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA-GGRGKGRFKELPADSK 67
           K  L  + +PVA    ++S    E   +T   P  V+K++  A  GRG  R         
Sbjct: 119 KEFLAAHGIPVAPFRSVASRSDIEELAQTWGYP-LVLKAKKDAYDGRGNAR--------- 168

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                 +S + + S +  + G  L               YVE   D+ +E  L L++ R 
Sbjct: 169 -----INSAEDIDSALARLAGREL---------------YVEQRIDLEKE--LGLMISRN 206

Query: 128 SGM 130
           +  
Sbjct: 207 ARG 209


>gi|320646179|gb|EFX15119.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli O157:H- str. 493-89]
          Length = 652

 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 32/194 (16%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQSYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +T        RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMTWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            + ++          +   +GG++        P+    + + PL         +L   L 
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLN-------MNLARYLV 630

Query: 179 LQGQARIDGGDLFP 192
           +QG           
Sbjct: 631 IQGIKVKRFVRAVR 644


>gi|312215618|emb|CBX95570.1| similar to carbamoyl-phosphate synthase arginine-specific large
           chain [Leptosphaeria maculans]
          Length = 1181

 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 68/233 (29%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N+P+AK + +S+V  A  A + +  P+ V  +    G            
Sbjct: 222 RDLFARALDEINIPIAKSIAVSTVDEALEAAEKVGYPIIVRAAYALGGL----------- 270

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    ++ + + +     L  +               + VE      +E    ++ 
Sbjct: 271 ----GSGFANNAEELKNLSARSLTLS-------------PQILVEKSLKGWKEAEYEVVR 313

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDML 177
           D     +          ++E            +++ P    + E+          +   L
Sbjct: 314 DAADNCITV-------CNMENFDPLGVHTGDSIVVSPSQTFSDEEYHMLRSASIKIVRHL 366

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 367 GVVGECNVQYCLQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 418


>gi|159029029|emb|CAO90015.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 908

 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 16/139 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++  +L+ Y +PV    +  S   A +  ++L  P+ V+K               +
Sbjct: 504 LSEPESLDILKAYGIPVIVTKIAESAAEAVNLAESLGYPV-VMKLH---------SQTII 553

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
              + GGV++   S ++V+   + I  +  I+ Q G        V ++   +I R   L 
Sbjct: 554 HKSAVGGVQLPLFSPRAVVQAYQAIEAN--ISAQVGREHFL--GVSIQPMLEIDRGYELI 609

Query: 122 LLVDRTSGM-VAFIASTQG 139
           +  +         I  T G
Sbjct: 610 IGSNYDDQCGPVIIFGTGG 628


>gi|291537281|emb|CBL10393.1| phosphoribosylamine--glycine ligase [Roseburia intestinalis M50/1]
 gi|291539226|emb|CBL12337.1| phosphoribosylamine--glycine ligase [Roseburia intestinalis XB6B4]
          Length = 425

 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A     +S   A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYHIPTAAYENFTSAEEALAYLETAKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+   + ++EI    +  K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKAGVKEI----MEDKKFGTAG---NTMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GKTIKIMSSAQD 212


>gi|271961964|ref|YP_003336160.1| phosphoribosylamine--glycine ligase [Streptosporangium roseum DSM
           43021]
 gi|270505139|gb|ACZ83417.1| Phosphoribosylamine--glycine ligase [Streptosporangium roseum DSM
           43021]
          Length = 410

 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 28/92 (30%), Gaps = 15/92 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+     +   A +A+     P YVVK    A G+             
Sbjct: 106 AKDVMVAAGVPTARSRTCVTPEEAAAALDEFGTP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPT 99
            GV V       +          +     GP 
Sbjct: 152 -GVVVTDDRDEALGHAAACGRVVIEEFLDGPE 182


>gi|328545117|ref|YP_004305226.1| acetyltransferase, GNAT family [polymorphum gilvum SL003B-26A1]
 gi|326414859|gb|ADZ71922.1| Acetyltransferase, GNAT family [Polymorphum gilvum SL003B-26A1]
          Length = 908

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 79/225 (35%), Gaps = 21/225 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFKELPADSK 67
            +L  Y++PV    +++   AAE+A           VVK+   A            +D  
Sbjct: 502 RVLAAYDIPVTPTRLVADAAAAEAASAAFFADHRHCVVKAYSPAL--------PFKSDID 553

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYLSLLVDR 126
           G     +S + V +   ++      T    P  G  V    +ED      ELYL  L D 
Sbjct: 554 GVRLGLASPQEVRAAAEDLTARIGATHPDRPLAGLTVQP-MLED--PHGVELYLG-LADN 609

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLELQGQAR 184
                  +    GG  +E V  D   ++  L +     +   +     L        + R
Sbjct: 610 PVFGPVVVF-GHGGTAVE-VTADIALELPPLDLHLAGALIERTRIARLLGAFRGRPAKDR 667

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                    L +   D  ++  L+INPL+   +G L  LD+++  
Sbjct: 668 AGVALALVKLSQIAIDIPEILELDINPLVATDSG-LVALDARVVL 711


>gi|284163623|ref|YP_003401902.1| lysine biosynthesis enzyme LysX [Haloterrigena turkmenica DSM 5511]
 gi|284013278|gb|ADB59229.1| lysine biosynthesis enzyme LysX [Haloterrigena turkmenica DSM 5511]
          Length = 294

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 31/108 (28%), Gaps = 17/108 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L K  VP     V  +   A  AI+    P  V+K  + + GR   +             
Sbjct: 99  LEKAGVPTPATKVAFTKETAMEAIEEFGYPC-VLKPVVGSWGRLMAKIDS---------- 147

Query: 72  VESSLKSVISDIREILG----STLITKQTGPTGSRVNCVYVEDGADIL 115
                   I + +  LG         ++      R   V   DG  I 
Sbjct: 148 --KDAAEAILEHKATLGHYEHKVFYVQEFVEKPGRDIRVLATDGEPIA 193


>gi|177773078|gb|ACB73273.1| phosphoribosylglycinamide formyltransferase (predicted)
           [Rhinolophus ferrumequinum]
          Length = 1017

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 117 AKEFMDRHGIPTAQWRAFTKPKEAYSFIMSADFPALVVKASGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  + +     ++EI    +  K  G  G     + +E+  +      L     R
Sbjct: 164 -GVIVAKNKEEACQAVQEI----MQDKAFGAAG---ETIVIEELLEGEEVSCLCFTDGR 214


>gi|239826549|ref|YP_002949173.1| carbamoyl phosphate synthase large subunit [Geobacillus sp. WCH70]
 gi|239806842|gb|ACS23907.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp. WCH70]
          Length = 1065

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P  +G    SV  A    + +  P+ V  S +  G
Sbjct: 674 LSELGIPQPQGKTAFSVEEAVRIAEEIGYPVLVRPSYVLGG 714



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  +I S+  A + ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESEIIHSLEEAYAFVEKVGYPVIV 168


>gi|114566807|ref|YP_753961.1| carbamoyl-phosphate synthase large subunit [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114337742|gb|ABI68590.1| carbamoyl-phosphate synthase large subunit [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 1074

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 43/198 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P   G  + SV  A  A + +  P+ +  S +  G                 + +  +
Sbjct: 679 GIPRPPGKTVFSVEEAVKAAEKIGYPVLLRPSYVLGG---------------RAMEIVYN 723

Query: 76  LKSVISD---IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           +  +         +     +       G  +    V DG        L +L+      + 
Sbjct: 724 VDELRQYMQTAVNVNREHPVLVDKYLLGKEIEVDAVCDG--------LQVLIPGIMQHIE 775

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
                 G       A D    I   ++D  +         L   LE++G   I   +   
Sbjct: 776 RAGVHSGDSMAVFPAHDLSPAIKDKVVDYTL--------RLARELEVKGLINIQFVEFED 827

Query: 193 NLYKAFCDKDMSLLEINP 210
            LY         +LE+NP
Sbjct: 828 ELY---------VLEVNP 836


>gi|317967968|ref|ZP_07969358.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. CB0205]
          Length = 450

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 89/237 (37%), Gaps = 32/237 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++K  VP   G   ++ +V  A +  +++  P+ ++K+    GGR           
Sbjct: 120 AKATMQKVGVPTIPGSEGLLENVDEARTLAESMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   + +     L      +     G+    +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVPSADQLDN-----LFKAAQGEAEAAFGNP--GLYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++   + I+  L     +   +    +  +G   
Sbjct: 218 RHGN---VVHVGERDCSIQRRHQKLLEEAPSVAINAELRRRMGDAAVAAARTIGYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI 239
           ++   D   N Y  F + +  +   +P+  M +G  L     +I+  +   +   +I
Sbjct: 275 VEFLVDRTGNFY--FMEMNTRIQVEHPVTEMVSGVDLIAEQLRIAGGEPISFSQEEI 329


>gi|22095485|sp|O50302|CARB_BACST RecName: Full=Carbamoyl-phosphate synthase pyrimidine-specific
           large chain; AltName: Full=Carbamoyl-phosphate
           synthetase ammonia chain
 gi|2661433|emb|CAA05020.1| carbomylphosphate synthetase large subunit [Geobacillus
           stearothermophilus]
          Length = 1064

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 59/203 (29%), Gaps = 45/203 (22%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  +P   G    SV  A +  + +  P+ V  S +  G                 + 
Sbjct: 674 LSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG---------------RAME 718

Query: 72  VESSLKSV---ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           +  + + +   +     +     +      TG  V    + DG  ++             
Sbjct: 719 IVYNREELLHYMEHAVRVNPQHPVLVDRYITGKEVEVDAIADGETVVI------------ 766

Query: 129 GMVAFIASTQ-GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
                +   +  G+   +    YP     L  D +  +T   V  L   L + G   I  
Sbjct: 767 --PGIMEHIERAGVHSGDSIAVYPP--QTLSDDVIAKITDYTV-KLARGLHIVGLLNIQF 821

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                         D+ +LE+NP
Sbjct: 822 ---------VVAGSDVYVLEVNP 835



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  +I S+  A + ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIIHSLEEAYAFVEQIGYPVIV 168


>gi|305663979|ref|YP_003860267.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit
           ;acetyl-CoA synthetase (ADP-forming) alpha subunit
           [Ignisphaera aggregans DSM 17230]
 gi|304378548|gb|ADM28387.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit
           ;acetyl-CoA synthetase (ADP-forming) alpha subunit
           [Ignisphaera aggregans DSM 17230]
          Length = 463

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 2/97 (2%)

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKIN 352
           AN +D+ G A  +    A      +  V  I++      +     + K IL AVK+  I 
Sbjct: 345 ANPIDITGMAPDEWYYKALLAALKNPDVHAIVVLYCQTAVTNPMGVAKSILDAVKDSGIK 404

Query: 353 IPLVMRLEGANVD-IGNRLIAESGLNVITAIDLDDAA 388
            P+ + + G        + + ++ +      +   AA
Sbjct: 405 KPITVGMVGGVETFEAIKYLTKNNIPAYPTPERAAAA 441


>gi|256783952|ref|ZP_05522383.1| hypothetical protein SlivT_05646 [Streptomyces lividans TK24]
          Length = 714

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 23/220 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K L   Y + V    +   V  A +      GP+ +             +        
Sbjct: 28  EGKVLADAYGIAVPGEELARDVDEAVACAARFGGPVVM-------------KIVSPDILH 74

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           K             +D+R      +   +     +R+  V +++     +E+ +  + D 
Sbjct: 75  KTDAGGVVVGVEGAADVRAAFCRIVDNARAYDASARIEGVQIQELLPQGQEVIVGAVTDP 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQ 182
           T G V       GG+ +E +     +      +D    ++  D     ++L       G 
Sbjct: 135 TFGKVVAFG--LGGVLVEVLKDVTFRLA---PVDADEALSMLDSIRAAEVLRGVRGQAGV 189

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
            R    +    + +   D  +++ +++NP+I    G +  
Sbjct: 190 DRWAVAEQIRRVSELVADFPEIAEVDLNPVIATPGGAVAA 229


>gi|57640879|ref|YP_183357.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus
           kodakarensis KOD1]
 gi|57159203|dbj|BAD85133.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus
           kodakarensis KOD1]
          Length = 474

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 23/175 (13%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +A+++   I    D         +A    L  +     IG + +G G  +   D +  +G
Sbjct: 279 DAVFKQTGIIRAEDFEHMF-DLAKAFAALLHKLPKGDRIGIITDGGGAGVMASDAVARFG 337

Query: 291 GA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
                                    N  DV G  D ++   A +  T D +V  I+I + 
Sbjct: 338 LKMAELSEETIKFLEENFPPHAVAGNPTDVVGDTDAERYRIAIEAFTKDPNVDAIVIIVL 397

Query: 330 GGIMRCDVLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAID 383
             +   +      + A  + K + P+V + + G   D   R++ E G+ V    +
Sbjct: 398 FQVPLLEEEKIIEILADYQKKTDKPIVAVAMGGRKTDRYARMLEEKGVPVYPTPE 452


>gi|289767834|ref|ZP_06527212.1| acyl-CoA synthetase [Streptomyces lividans TK24]
 gi|289698033|gb|EFD65462.1| acyl-CoA synthetase [Streptomyces lividans TK24]
          Length = 715

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 23/220 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K L   Y + V    +   V  A +      GP+ +             +        
Sbjct: 29  EGKVLADAYGIAVPGEELARDVDEAVACAARFGGPVVM-------------KIVSPDILH 75

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           K             +D+R      +   +     +R+  V +++     +E+ +  + D 
Sbjct: 76  KTDAGGVVVGVEGAADVRAAFCRIVDNARAYDASARIEGVQIQELLPQGQEVIVGAVTDP 135

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQ 182
           T G V       GG+ +E +     +      +D    ++  D     ++L       G 
Sbjct: 136 TFGKVVAFG--LGGVLVEVLKDVTFRLA---PVDADEALSMLDSIRAAEVLRGVRGQAGV 190

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRV 221
            R    +    + +   D  +++ +++NP+I    G +  
Sbjct: 191 DRWAVAEQIRRVSELVADFPEIAEVDLNPVIATPGGAVAA 230


>gi|254572936|ref|XP_002493577.1| Urea amidolyase, contains both urea carboxylase and allophanate
           hydrolase activities [Pichia pastoris GS115]
 gi|238033376|emb|CAY71398.1| Urea amidolyase, contains both urea carboxylase and allophanate
           hydrolase activities [Pichia pastoris GS115]
 gi|328354595|emb|CCA40992.1| urea carboxylase [Pichia pastoris CBS 7435]
          Length = 1832

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 29/174 (16%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    +++S   A+     L  P+ V KS    GG G  +      
Sbjct: 742 HSAREIAEKAGVPLVPGSGLVTSTKEAKEIAAKLEYPVMV-KSTAGGGGIGLQK------ 794

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E+ ++ V   ++    S              + V++E   +  R + + +  
Sbjct: 795 -----VDSEADIERVFETVQHQGKSYFGD----------SGVFLERFVENARHVEIQMFG 839

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           D     +A       G     + +   + I +     L   T   +    + L 
Sbjct: 840 DGYGKAIAL------GERDCSLQRRNQKIIEETPAPNLPEATRLKMRKAAEQLG 887


>gi|220933546|ref|YP_002512445.1| Phosphoribosylamine--glycine ligase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994856|gb|ACL71458.1| Phosphoribosylamine--glycine ligase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 430

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 26/166 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++ +P A     + + AA + I+    P+ VVK+   A G+             
Sbjct: 108 SKDFLARHAIPTAAYANFTDLDAALAYIRERGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  ++    + +R++L         G  G RV    VE+        ++ ++    
Sbjct: 154 -GVILAQTVAEAEAAVRDMLA----GNAFGEAGHRV---VVEEFLTGEEASFICMV---D 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
              +  +AS+Q     ++  K  P         P   VT E  A +
Sbjct: 203 GEHILPMASSQDHKARDDGDKG-PNTGGMGAYSPAPVVTPEIHARI 247


>gi|91217446|ref|ZP_01254405.1| carbamoyl-phosphate synthase, large subunit [Psychroflexus torquis
           ATCC 700755]
 gi|91184331|gb|EAS70715.1| carbamoyl-phosphate synthase, large subunit [Psychroflexus torquis
           ATCC 700755]
          Length = 950

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 15/78 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ N+P  +  V  +   A +  + L  P+ V  S +  G                G
Sbjct: 689 KLLQQNNIPYPEFGVAETADEALALAEELDFPILVRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDIREIL 87
           +++  + K + + + ++L
Sbjct: 734 MKIVINKKELETHVVDLL 751


>gi|116493204|ref|YP_804939.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103354|gb|ABJ68497.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Pediococcus
           pentosaceus ATCC 25745]
          Length = 379

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 41/127 (32%), Gaps = 5/127 (3%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E   K  L  + +PV    V+      E AI  L  P  +  S+    G G+      
Sbjct: 113 IRE---KNFLSSHGIPVTSYQVVEKPTDLEMAIAKLGYPSILKTSEGGYDGHGQQDINSE 169

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G   V  +    I + R+     L    T      V C  V +       L+ S+
Sbjct: 170 ADLLAGQRLVAQAP--CILEQRQNFTKELSVMVTRSREGIVQCFPVAENEHQHHILHQSI 227

Query: 123 LVDRTSG 129
           +  R S 
Sbjct: 228 VPARVSQ 234


>gi|23015244|ref|ZP_00055026.1| COG1042: Acyl-CoA synthetase (NDP forming) [Magnetospirillum
           magnetotacticum MS-1]
          Length = 891

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 95/272 (34%), Gaps = 31/272 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E  AKALL  Y +      + S V++A +A   +  P+ +                 
Sbjct: 488 NLTEPDAKALLSAYGIKTQDTRLASDVNSAVAAADAVGYPVAL----------TIASPDV 537

Query: 62  LPADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILREL 118
                 GGV +      +V S    IL     ++       RV+   ++  A     R+L
Sbjct: 538 ARKWDVGGVALNLEDAAAVRSAAEGILRRVAESR----PDIRVDGFTIQRMAFRPNARQL 593

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDM 176
            + +  D   G V      +GG  +E +       +  + +    G+   +     L   
Sbjct: 594 IVGVACDALFGPVLVFG--EGGRAVEVIRDHTVG-LPPVNLPLARGMIGRTRVSRLLQAH 650

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD--DNAL 233
                       ++   + +   D  ++   +INPL   + G L  +D++I     ++  
Sbjct: 651 GRRPAVDEDAVAEVLVRVSRMLADNPEIVACDINPLFADEAGAL-AVDARIRVAPWEDTD 709

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
            RH  I       EE      AK H+ S ++L
Sbjct: 710 TRHFSILPYPAELEE-----TAKLHDGSPVSL 736


>gi|324113110|gb|EGC07086.1| acetyltransferase [Escherichia fergusonii B253]
          Length = 886

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIATDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLDI 694


>gi|323978386|gb|EGB73471.1| acetyltransferase [Escherichia coli TW10509]
          Length = 886

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIATDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLDI 694


>gi|323967628|gb|EGB63041.1| acetyltransferase [Escherichia coli M863]
 gi|327252294|gb|EGE63966.1| acetyltransferase family protein [Escherichia coli STEC_7v]
          Length = 886

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIATDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLDI 694


>gi|169335857|ref|ZP_02863050.1| hypothetical protein ANASTE_02283 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258595|gb|EDS72561.1| hypothetical protein ANASTE_02283 [Anaerofustis stercorihominis DSM
           17244]
          Length = 1141

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK    +  V V  GV + +V  A+     +  P+ ++K+    GGRG
Sbjct: 122 AKEAAIEAGVSVLDGVKVETVEEAKEISSKIGYPV-IIKASAGGGGRG 168


>gi|88812521|ref|ZP_01127770.1| phosphoribosylamine--glycine ligase [Nitrococcus mobilis Nb-231]
 gi|88790307|gb|EAR21425.1| phosphoribosylamine--glycine ligase [Nitrococcus mobilis Nb-231]
          Length = 432

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+  V +   AA   I+    P+ VVK    A G+              
Sbjct: 109 KDFLIRHGIPTAEHRVFTDPDAARDYIRERGAPI-VVKVDGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   +  +   L    + K  G  G     + VE+  +   E    +LVD   
Sbjct: 154 GVTVAMNLDEALRAVEAAL----VDKAFGAAG---ERIVVEEYLE-GEEASFMVLVDGEQ 205

Query: 129 GMVAFIASTQG 139
            +   +AS+Q 
Sbjct: 206 ALP--LASSQD 214


>gi|186682746|ref|YP_001865942.1| phosphoribosylamine--glycine ligase [Nostoc punctiforme PCC 73102]
 gi|186465198|gb|ACC80999.1| phosphoribosylamine--glycine ligase [Nostoc punctiforme PCC 73102]
          Length = 427

 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+++  +P A+  V +   AA+S +K+   P+ VVK+   A G+             
Sbjct: 108 AKALMQEAGIPTARAAVFTEAGAAKSYVKSQGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    S +  I        Q G  G  V    +E+   I +E+ +  L D  
Sbjct: 154 -GVIVAETVAQAESAVDAIF-----QGQFGSVGEFV---VIEECL-IGQEVSVLALTDGL 203

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 204 TIRPLLPA 211


>gi|312864214|ref|ZP_07724448.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           vestibularis F0396]
 gi|322517235|ref|ZP_08070114.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           vestibularis ATCC 49124]
 gi|311100215|gb|EFQ58424.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           vestibularis F0396]
 gi|322124141|gb|EFX95675.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           vestibularis ATCC 49124]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+     P+ +  ++++V  A +    +  P+ V  +    G                
Sbjct: 133 KQLMEDLKQPIPESEIVNTVEEAVAFATEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|226325478|ref|ZP_03800996.1| hypothetical protein COPCOM_03283 [Coprococcus comes ATCC 27758]
 gi|225206221|gb|EEG88575.1| hypothetical protein COPCOM_03283 [Coprococcus comes ATCC 27758]
          Length = 437

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A      +   A + ++T   P+ V+K+   A G+             
Sbjct: 120 SKDLMKKYDIPTAAYENFDNADEALAYLETAKFPI-VLKADGLALGK------------- 165

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+   + ++EI    ++ K+ G +G   N + VE+         +S+L    
Sbjct: 166 -GVLICNTLEEAKAGVKEI----MLDKKFGASG---NTMVVEEFMTGRE---VSVLSFVD 214

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 215 GKTIKTMTSAQD 226


>gi|146320640|ref|YP_001200351.1| carbamoyl phosphate synthase large subunit [Streptococcus suis
           98HAH33]
 gi|145691446|gb|ABP91951.1| Carbamoylphosphate synthase large subunit [Streptococcus suis
           98HAH33]
          Length = 1074

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  K      +P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 689 RDLFEKALKDLGIPQPPGQTATNEEEALEAARKIGFPVLVRPSYVLGG 736



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 155 KQLMEDLNQPIPESTIVTTVDEALEFAAEIGYPVIVRPAFTLGG---------------T 199

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 200 GGGMCANEEELREIAENGLKLSPVTQC 226


>gi|146318446|ref|YP_001198158.1| carbamoyl phosphate synthase large subunit [Streptococcus suis
           05ZYH33]
 gi|145689252|gb|ABP89758.1| Carbamoylphosphate synthase large subunit [Streptococcus suis
           05ZYH33]
 gi|292558232|gb|ADE31233.1| Carbamoyl-phosphate synthase, large subunit [Streptococcus suis
           GZ1]
 gi|319758016|gb|ADV69958.1| carbamoyl phosphate synthase large subunit [Streptococcus suis
           JS14]
          Length = 1081

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  K      +P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 689 RDLFEKALKDLGIPQPPGQTATNEEEALEAARKIGFPVLVRPSYVLGG 736



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 155 KQLMEDLNQPIPESTIVTTVDEALEFAAEIGYPVIVRPAFTLGG---------------T 199

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 200 GGGMCANEEELREIAENGLKLSPVTQC 226


>gi|220927591|ref|YP_002504500.1| cyanophycin synthetase [Clostridium cellulolyticum H10]
 gi|219997919|gb|ACL74520.1| cyanophycin synthetase [Clostridium cellulolyticum H10]
          Length = 893

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL   NVPV  G+V+ +   A  A++ +  P  V+K         +G+   +   ++ 
Sbjct: 219 KKLLMDNNVPVPCGIVVRTEQEAFEAVEMVGYP-LVIKP----IDSNQGKGVTVNISTED 273

Query: 69  GVRVESSLKSVISDIREIL 87
            +R   S        R+++
Sbjct: 274 KIRAAYS--EARKYSRKVI 290


>gi|15921798|ref|NP_377467.1| carbamoyl phosphate synthase large subunit [Sulfolobus tokodaii
           str. 7]
 gi|22095518|sp|Q970U7|CARB_SULTO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|15622585|dbj|BAB66576.1| 1049aa long hypothetical carbamoyl-phosphate synthase large subunit
           [Sulfolobus tokodaii str. 7]
          Length = 1049

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 57/215 (26%), Gaps = 42/215 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +PV   +   S   A    + +  P+ V                      +G + V  +
Sbjct: 138 GLPVPPSLSARSEEEALEKARQIGYPVMV--------------RVSFNLGGRGSI-VAWN 182

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            + +  DI   L  +            ++ V +E       EL   ++ D+         
Sbjct: 183 EEELKRDIGRALSQS-----------YIHEVLIEKYLHHWIELEYEVMRDKYGNSAVIAC 231

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGV-------TSEDVASLCDMLELQGQARIDGG 188
                  IE +           +I P   +              +   ++L G+  +   
Sbjct: 232 -------IENLDPMGVHTGESTVISPCQTLDNKEFQDMRFMSMDVAKSIDLVGECNVQFA 284

Query: 189 DLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVL 222
            L P  Y  +  + +  +   + L     G     
Sbjct: 285 -LDPKGYNYYVIETNPRMSRSSALASKATGYPLAY 318


>gi|260063198|ref|YP_003196278.1| carbamoyl phosphate synthase large subunit [Robiginitalea biformata
           HTCC2501]
 gi|88783292|gb|EAR14464.1| carbamoyl-phosphate synthase, large subunit [Robiginitalea
           biformata HTCC2501]
          Length = 950

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 15/81 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+  ++P  +  V  S   A      L  PL V  S +  G                G
Sbjct: 689 RLLKDNDIPYPQFGVAESADEALQLADELKFPLLVRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDIREILGST 90
           +++  + + + + + ++L   
Sbjct: 734 MKIVINKEELEAHVVDLLRKI 754


>gi|330832726|ref|YP_004401551.1| carbamoyl phosphate synthase large subunit [Streptococcus suis ST3]
 gi|329306949|gb|AEB81365.1| carbamoyl phosphate synthase large subunit [Streptococcus suis ST3]
          Length = 1081

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  K      +P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 689 RDLFEKALKDLGIPQPPGQTATNEEEALEAARKIGFPVLVRPSYVLGG 736



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 155 KQLMEDLNQPIPESTIVTTVDEALEFAAEIGYPVIVRPAFTLGG---------------T 199

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 200 GGGMCANEEELREIAENGLKLSPVTQC 226


>gi|312277931|gb|ADQ62588.1| Carbamoyl-phosphate synthase large chain [Streptococcus
           thermophilus ND03]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +    +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFATEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|320105324|ref|YP_004180914.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Terriglobus saanensis SP1PR4]
 gi|319923845|gb|ADV80920.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Terriglobus saanensis SP1PR4]
          Length = 386

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 9/101 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +   PV +  V  ++     A++ L G  +V  +     GRG+ +         G
Sbjct: 110 KDWLLRNGFPVGRYRVCRTLEQLREAVEALGGKCFVKSAMGGYDGRGQAKI--------G 161

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
                ++   +     ++ G   + +Q       ++ V V 
Sbjct: 162 FAAGATAEDEITEAWDDLRGGPCVAEQALALKQEIS-VMVA 201


>gi|152993474|ref|YP_001359195.1| phosphoribosylamine--glycine ligase [Sulfurovum sp. NBC37-1]
 gi|151425335|dbj|BAF72838.1| phosphoribosylamine--glycine ligase [Sulfurovum sp. NBC37-1]
          Length = 422

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++NVP A+ +  + +  A   I TL  P+ VVK+    GG+              
Sbjct: 105 KNFLARHNVPTARYIETNLLEEAYKFINTLEAPI-VVKADGLCGGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S         E+L         G  G     + VE+  D
Sbjct: 150 GVIIAQSRDEAKKAAGEML----SGNSFGEAG---TSIVVEEFLD 187


>gi|183979202|emb|CAQ42993.1| carbamoyl phosphate synthetase [Streptococcus thermophilus]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +    +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFATEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|56808222|ref|ZP_00365996.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in
           MJ) [Streptococcus pyogenes M49 591]
          Length = 1023

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E   KAL ++  +P  +G   ++   A  A K +  P+ V  S +  G
Sbjct: 668 DLFE---KAL-KELGIPQPQGQTATNEEEALQAAKKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + P+ +  ++ +V  A +  + +  P+ V
Sbjct: 133 KQLMQELDQPIPESTIVKTVDEAVTFARDIGYPVIV 168


>gi|329926124|ref|ZP_08280715.1| phosphoribosylamine--glycine ligase [Paenibacillus sp. HGF5]
 gi|328939398|gb|EGG35752.1| phosphoribosylamine--glycine ligase [Paenibacillus sp. HGF5]
          Length = 422

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KY++P A      +   A + ++    P+ VVK+   A G+              
Sbjct: 107 KDLLHKYSIPTAAYAKFDNYEEALAYLRQQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++     + +I    + +K  G  G   + V +E+  +  +E+ +   VD  +
Sbjct: 152 GVTVARTIEEAEQALSDI----MQSKVFGDAG---SRVVIEEFLE-GQEMSILAFVDGET 203

Query: 129 GMVA 132
               
Sbjct: 204 VKPM 207


>gi|320450057|ref|YP_004202153.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Thermus
           scotoductus SA-01]
 gi|320150226|gb|ADW21604.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Thermus
           scotoductus SA-01]
          Length = 445

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 19/109 (17%)

Query: 8   AKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ + R+  VP   G   ++SV  A+ A + +  P+ ++K+    GGRG  R      + 
Sbjct: 118 ARKVAREAGVPTVPGTDELTSVEEAKRAAQEIGYPV-ILKASAGGGGRGM-RLVHTEEEL 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           +  V+          + R   G+  I  +           Y+E+   I 
Sbjct: 176 ERAVQ------QAQEEARAAFGNPAIYLEK----------YIEEPKHIE 208


>gi|317480038|ref|ZP_07939150.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           4_1_36]
 gi|316903780|gb|EFV25622.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           4_1_36]
          Length = 388

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   ++A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYFYAKSLDELKAAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|292654223|ref|YP_003534120.1| rimK family protein [Haloferax volcanii DS2]
 gi|291370207|gb|ADE02434.1| rimK family protein [Haloferax volcanii DS2]
          Length = 291

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 17/108 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VP     V  +V +A   ++    P  V+K  + + GR   +             
Sbjct: 97  LADAGVPTPNTKVAFTVDSAMDIVEEFGYPC-VLKPVVGSWGRLMAKIDS---------- 145

Query: 72  VESSLKSVISDIREILG----STLITKQTGPTGSRVNCVYVEDGADIL 115
              S    I + +  LG         ++      R   V   DG  + 
Sbjct: 146 --ESAAEAILEHKSTLGNYEHKVFYIQEFVEKPGRDIRVLATDGEPVA 191


>gi|289522491|ref|ZP_06439345.1| phosphoribosylamine--glycine ligase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289504327|gb|EFD25491.1| phosphoribosylamine--glycine ligase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 422

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +++ N+P A   V S +  A+ A+     P YV+K+   A G+             
Sbjct: 106 AKNFMKRQNIPTAPFDVCSDLDEAKKALAK-RTPPYVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            G  V   +K       E+L    + ++ G  G  +
Sbjct: 152 -GAFVVGEMKEAEKIASELL----VERRLGEAGQTI 182


>gi|228478416|ref|ZP_04063024.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           salivarius SK126]
 gi|228250095|gb|EEK09365.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           salivarius SK126]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+     P+ +  ++++V  A +    +  P+ V  +    G                
Sbjct: 133 KQLMEDLEQPIPESEIVNTVEEAVAFASEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|84626401|gb|ABC59740.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit
          [Spermophilus parryii]
          Length = 38

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 1  MNIHEYQAKALLRKYNVPVAKG 22
          +++HEY +  LL++  V V KG
Sbjct: 17 LSLHEYMSMELLQEAGVSVPKG 38


>gi|114566875|ref|YP_754029.1| cyanophycin synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337810|gb|ABI68658.1| UDP-N-acetylmuramyl tripeptide synthase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 887

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL++ N+PV  G +++S   A    + +  P+ V
Sbjct: 219 KDLLKENNIPVPCGGIVNSEDGAVVLAEQIGYPIVV 254


>gi|294496302|ref|YP_003542795.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanohalophilus mahii DSM 5219]
 gi|292667301|gb|ADE37150.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanohalophilus mahii DSM 5219]
          Length = 697

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 36/177 (20%)

Query: 225 KISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD 284
             +FD   + R   ++++ D     S +                I  + N  GL + T D
Sbjct: 263 NAAFDKAGVVRADTLEDMLDYIRAFSTQPIPAGR---------RIAILTNAGGLGILTAD 313

Query: 285 IIKLYGGAPANF---------------------LDVGGGADQDKVAAAFKIITSDSSVKG 323
                G   A+F                     +DV G A       A +I+  D +V G
Sbjct: 314 ACYYEGLELASFSAETIEGLREFLPDAASFYNPVDVLGDASAKLYGDALEIVLKDPNVDG 373

Query: 324 ILINIFGGIMRCDV--LVKGILSAVKEVKINIPLVMR-LEGANVDIGNRLIAESGLN 377
           +++         DV  + + ++  V+    + P++   + G  V  GN ++   G+ 
Sbjct: 374 VILLT-SPQAMTDVTSIARIVIQKVEYS--DKPVLCSFVGGTRVMEGNFILVAGGVP 427


>gi|291300639|ref|YP_003511917.1| carbamoyl-phosphate synthase large subunit [Stackebrandtia
           nassauensis DSM 44728]
 gi|290569859|gb|ADD42824.1| carbamoyl-phosphate synthase, large subunit [Stackebrandtia
           nassauensis DSM 44728]
          Length = 1105

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L K  +P  K    S+   A++    +  P+ V  S +  GGRG
Sbjct: 687 KILAKAGLPAPKHGTASTYAEAKTIAADIGYPVLVRPSYVL-GGRG 731


>gi|93355848|gb|ABF09937.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Cupriavidus
           metallidurans CH34]
          Length = 477

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 113/340 (33%), Gaps = 59/340 (17%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V    G +        +  + +  P+ +  +                 
Sbjct: 141 AKQAMIKSGVPCVPGSDGALPDDPKEILATARRVGYPVIIKAA------------GGGGG 188

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      +          VY+E   +  R + + +L 
Sbjct: 189 RGMRVVHTEAALLNAVNMTREEAGRAFGNPE----------VYMEKFLENPRHVEIQILA 238

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           D+    +      +    ++   +   ++     I   LI    +  A  C  +  +G  
Sbjct: 239 DQHRQAIWL---GERDCSMQRRHQKVIEEAPAPHIPRRLIERIGDRCAEACKKIGYRGAG 295

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
             +           + + +   +E+N       P+  M  G  +     +I+F +    R
Sbjct: 296 TFEF---------LYENNEFYFIEMNTRVQVEHPVTEMITGIDIVQEQIRIAFGEKLRLR 346

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGAP 293
             D+ ELR  + E     E       +    G I    M  G G+ + +      +   P
Sbjct: 347 QKDV-ELRGHAIECRINAE---DPFKFTPSPGRITAWHMPGGPGVRVDSHAYDGYF--VP 400

Query: 294 ANF-----LDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
            N+       +  GA +D+  A  +I  S+  V GIL N+
Sbjct: 401 PNYDSMIGKIITYGATRDQAIARMRIALSEMVVDGILTNV 440


>gi|320176118|gb|EFW51185.1| Protein acetyltransferase [Shigella dysenteriae CDC 74-1112]
          Length = 886

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVGHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARCALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|255319483|ref|ZP_05360697.1| phosphoribosylamine--glycine ligase [Acinetobacter radioresistens
           SK82]
 gi|262378493|ref|ZP_06071650.1| phosphoribosylamine-glycine ligase [Acinetobacter radioresistens
           SH164]
 gi|255303423|gb|EET82626.1| phosphoribosylamine--glycine ligase [Acinetobacter radioresistens
           SK82]
 gi|262299778|gb|EEY87690.1| phosphoribosylamine-glycine ligase [Acinetobacter radioresistens
           SH164]
          Length = 427

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVDAAKAFVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E+        ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEEFLAGEEASFICMI 201


>gi|20089560|ref|NP_615635.1| pyruvate carboxylase subunit A [Methanosarcina acetivorans C2A]
 gi|19914474|gb|AAM04115.1| pyruvate carboxylase subunit A [Methanosarcina acetivorans C2A]
          Length = 493

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 78/220 (35%), Gaps = 51/220 (23%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ K  VPV  G    +  V+ A    + +  P+ +  S   AGG G          
Sbjct: 119 ARNLMMKAGVPVVPGTKDAVEDVNEALEIAEKIGYPVLIKAS---AGGGGI--------- 166

Query: 66  SKGGVRVESSLKSV---ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              G++V  S++ +   +S  +++ GS              + V++E   +  R + + +
Sbjct: 167 ---GMKVVHSIEELSTSLSSTQQMAGSAFGD----------SSVFIEKYVEEPRHIEIQI 213

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-----TSEDVASLCDML 177
           L D +   V          D E   +   QK+ +    P++         E    +   +
Sbjct: 214 LADASGNTVYL-------SDRECSIQRRHQKLIEEAPSPIMTPELRKQMGEAAVKVAKAI 266

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  ++           +   +   LE+N  + +++G
Sbjct: 267 GYINAGTVEF---------LYSKGNFYFLEVNTRLQVEHG 297


>gi|55820608|ref|YP_139050.1| carbamoyl phosphate synthase large subunit [Streptococcus
           thermophilus LMG 18311]
 gi|55822498|ref|YP_140939.1| carbamoyl phosphate synthase large subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116627411|ref|YP_820030.1| carbamoyl phosphate synthase large subunit [Streptococcus
           thermophilus LMD-9]
 gi|81820333|sp|Q5M0W9|CARB_STRT1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|81820496|sp|Q5M5F6|CARB_STRT2 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|122267990|sp|Q03LT8|CARB_STRTD RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|55736593|gb|AAV60235.1| carbamoyl phosphate synthetase, large chain [Streptococcus
           thermophilus LMG 18311]
 gi|55738483|gb|AAV62124.1| carbamoyl phosphate synthetase, large chain [Streptococcus
           thermophilus CNRZ1066]
 gi|116100688|gb|ABJ65834.1| carbamoyl-phosphate synthase large subunit [Streptococcus
           thermophilus LMD-9]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +    +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFATEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|172065319|ref|YP_001816031.1| CoA-binding domain-containing protein [Burkholderia ambifaria
           MC40-6]
 gi|171997561|gb|ACB68478.1| CoA-binding domain protein [Burkholderia ambifaria MC40-6]
          Length = 699

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 74/240 (30%), Gaps = 38/240 (15%)

Query: 3   IHEYQAKALLRKYNV-PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E QAKAL  ++ V PV +  V+     AE A +       V+K             + 
Sbjct: 483 LDEAQAKALFARFGVTPV-RERVVRDAADAEQAARHFG-DRVVLK---------LLSNRV 531

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV V  +  ++ + +  +             G   +   V++      E+ + 
Sbjct: 532 THKSDIGGVAVGVAADAIGARLERM-----RDDVETGAGFAPDAFLVQEMVGGGVEMIVG 586

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           L  D     +       GG+  E         +  L  D    ++ +D   +   L    
Sbjct: 587 LHRDPLGTAILL---GMGGVTAEIFNDTV---LRMLPED--APLSRDDALDMIRALRTWP 638

Query: 178 ------ELQGQARIDGGDLFPNLYKAFCDKDMSLL--EINPLIIMKNGR-LRVLDSKISF 228
                            D      +        L+  EINPL +++ GR +R  D     
Sbjct: 639 LLDGYRGRPKADVDALADALVAFARMARQLGPRLVEAEINPLFVLEAGRGVRAADGVAVL 698


>gi|291523225|emb|CBK81518.1| phosphoribosylamine--glycine ligase [Coprococcus catus GD/7]
          Length = 423

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 24/115 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A     +   AA   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTATYENFTDPQAALDYLETAKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADI 114
            GV +  +L+   + ++EI+        G+ ++ ++   TG  V+ +   DG +I
Sbjct: 152 -GVLICQNLEEARAGVKEIMEDKKFGSAGNQMVVEEFM-TGREVSALCFCDGTNI 204


>gi|225376616|ref|ZP_03753837.1| hypothetical protein ROSEINA2194_02258 [Roseburia inulinivorans DSM
           16841]
 gi|225211499|gb|EEG93853.1| hypothetical protein ROSEINA2194_02258 [Roseburia inulinivorans DSM
           16841]
          Length = 424

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDPQEALAYLETAKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+   + ++EI    +  K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTLEEAKAGVKEI----MEDKKFGTAG---NTMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GKTIKIMSSAQD 212


>gi|50122440|ref|YP_051607.1| putative acyl-CoA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|49612966|emb|CAG76417.1| putative acyl-CoA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 882

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 76/219 (34%), Gaps = 20/219 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLDTLPTWIAGDSAEAVHIAEQIGYPVAI---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    + + V      IL     T        R+  + V+  A+    +EL
Sbjct: 531 PHKSEVQGVMLYLQTAREVQQAADAILDRVKRTFPQA----RIYGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            +++  D   G +  +   +GG++  E           + +   + + +     + +   
Sbjct: 587 RIAVEQDPVFGPLIMLG--EGGVEWREKQAAVALPPLNMTLARYLVLQAVKGGKIREYSA 644

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           L+         L   +     D  ++S L+I+PL+   +
Sbjct: 645 LRPLDIPALSRLLVQVSNLILDCPEISRLDIHPLLASGD 683


>gi|86142716|ref|ZP_01061155.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
           [Leeuwenhoekiella blandensis MED217]
 gi|85830748|gb|EAQ49206.1| carbamoyl-phosphate synthase, large (or ammonia) subunit (carB)
           [Leeuwenhoekiella blandensis MED217]
          Length = 950

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 15/81 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ N+P  +     +   A +    L  P+ V  S +  G                G
Sbjct: 689 RLLKENNIPYPEFDTAETAEEALAVADKLDFPILVRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDIREILGST 90
           +++  +   +   + ++L   
Sbjct: 734 MKIVINKDELEETVVDLLRKI 754


>gi|301058692|ref|ZP_07199693.1| carbamoyl-phosphate synthase, large subunit [delta proteobacterium
           NaphS2]
 gi|300447256|gb|EFK11020.1| carbamoyl-phosphate synthase, large subunit [delta proteobacterium
           NaphS2]
          Length = 1078

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 33/158 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++K  + V    +  ++  A  A + +  P+ +  S    G                G  
Sbjct: 136 MKKIGLKVPDNFIARNMDEARYAAEQIGYPIIIRASYTLGGI---------------GSG 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V  +   +    +  L +++I++           V +E      +E  L ++ D     V
Sbjct: 181 VAYNRDEMEEIAKAGLDASMISE-----------VIMERSLLGWKEYELEVMRD-FKDNV 228

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
             I S      IE            + + P   ++  +
Sbjct: 229 VIICS------IENFDPMGVHTGDSITVAPAQTLSDYE 260


>gi|224367653|ref|YP_002601816.1| SucC3 [Desulfobacterium autotrophicum HRM2]
 gi|223690369|gb|ACN13652.1| SucC3 [Desulfobacterium autotrophicum HRM2]
          Length = 697

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 26/230 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E ++KA+L+   +PV    +  +   A +A ++   P+      +    RG     E 
Sbjct: 490 LDENRSKAILKARGIPVVNETMALNEREALAAAQSHGFPVV-----MKGIFRGMVHKTEA 544

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G      S + V     E+L        T   G     V V+       EL + +
Sbjct: 545 GLVRLG----VKSAQEVEVVYAELL--------TAMDGR--GTVLVQQQVPQALELIVGM 590

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED--VASLCDMLELQ 180
           + D   G    +    GG+ + EV  D    +  L     + + +       L       
Sbjct: 591 IRDPQFG--VCVMCGMGGV-LAEVLGDTVFGVAPLTEGEALALIARMKSCKLLDGFRGGV 647

Query: 181 GQARIDGGDLFPNLYKAFCD-KDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           G  R     +   + +   + K +  ++INPLI   +G    +D+ I  +
Sbjct: 648 GVDRRALAQILVRVGQLGLENKRIREIDINPLI-PMDGMPVAVDASIILN 696


>gi|160889546|ref|ZP_02070549.1| hypothetical protein BACUNI_01970 [Bacteroides uniformis ATCC 8492]
 gi|270296670|ref|ZP_06202869.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D20]
 gi|156861063|gb|EDO54494.1| hypothetical protein BACUNI_01970 [Bacteroides uniformis ATCC 8492]
 gi|270272657|gb|EFA18520.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D20]
          Length = 388

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   ++A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYFYAKSLDELKAAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|116751328|ref|YP_848015.1| carbamoyl phosphate synthase large subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116700392|gb|ABK19580.1| carbamoyl-phosphate synthase large subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 1066

 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++K  +P+ +  + S++  A    + +  PL V  S +  GGRG
Sbjct: 674 MKKLGIPMPESGMASTLEEALEVARKIGYPLMVRPSYVL-GGRG 716



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + + N+ + +     SV  AE     L  P+ +               +        
Sbjct: 133 KETMNRLNIEMPRSEPALSVKEAEEIAARLGYPVVI---------------RPAYTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + +     + ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNVEELRTIAGRGISASL-----------VGQVLVEESVLGWEELELEVVRDAKN 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 RRITV 231


>gi|268608817|ref|ZP_06142544.1| carbamoyl phosphate synthase large subunit [Ruminococcus
           flavefaciens FD-1]
          Length = 1063

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 33/82 (40%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A +A + L  P+ +  S +  G                G
Sbjct: 670 EVLEKCGIPRPAGHTVMNTEEAIAAAEDLGYPVLLRPSYVLGGQNMIIAHSRADVVEYMG 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
           + +  ++++ +   + ++G+ +
Sbjct: 730 IIMSHNIENPVLIDKYMMGTEV 751


>gi|332525600|ref|ZP_08401755.1| GCN5-like protein N-acetyltransferase [Rubrivivax benzoatilyticus
           JA2]
 gi|332109165|gb|EGJ10088.1| GCN5-like protein N-acetyltransferase [Rubrivivax benzoatilyticus
           JA2]
          Length = 885

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 4/97 (4%)

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGI-LINIFGGIMRCDVLVKGILSAVKEVKIN 352
           AN +D+ G A   +   A   + +D+S   +  ++    I+    + + ++ A++   + 
Sbjct: 342 ANPVDIVGDAPVQRYVDAIAALHTDTSPGTLLFVHAPTAIVPAAEVARAVIPALQRSPLQ 401

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
            P+   L G  V     L   +GL   T    +DA +
Sbjct: 402 -PMTCWLGGDAVREARALCHAAGLP--TYDTPEDAVR 435



 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 86/238 (36%), Gaps = 33/238 (13%)

Query: 3   IHEYQAKALLRKYNVPV-AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E +AKA+L    VPV A   V     AA +A + L  P+  +K      G        
Sbjct: 483 LTEPEAKAVLAAVGVPVVATHSVAPDPEAAVAAAQALGFPV-ALKIVAPELG-------- 533

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPT--GSRVNCVYVEDGADILRELY 119
             +D  G         SV      +L   +  +Q G    G  V    V   + +  EL 
Sbjct: 534 HKSDIGGVALDLDDAASVRDAASSML-RRVRERQPGAAITGFSVQT-MVRRASGL--ELI 589

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VAS 172
           +   +D   G V    +  GG  +E VA         + + PL    +            
Sbjct: 590 VGATLDPLFGPVILFGA--GGTAVEVVADRA------VALPPLNRPLARALVERTRVARL 641

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
           L    ++         D+   + +   D+  ++ L++NPL+   +G +  LD++I  D
Sbjct: 642 LAGWRDVPAADVDAVCDVLVRVSQLLADEPRIAELDLNPLVADAHG-VLALDARIRVD 698


>gi|138894679|ref|YP_001125132.1| carbamoyl phosphate synthase large subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266192|gb|ABO66387.1| Carbamoyl-phosphate synthase, large subunit [Geobacillus
           thermodenitrificans NG80-2]
          Length = 1065

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L +  +P   G    SV  A +  + +  P+ V  S +  G
Sbjct: 672 QVLSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  ++ S+  A   ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIVHSLEEAYEFVQQIGYPVIV 168


>gi|117929334|ref|YP_873885.1| phosphoribosylamine--glycine ligase [Acidothermus cellulolyticus
           11B]
 gi|117649797|gb|ABK53899.1| phosphoribosylamine--glycine ligase [Acidothermus cellulolyticus
           11B]
          Length = 420

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  + +S   A +A+     P YVVK+   A G+G
Sbjct: 106 AKDVMTAAGVPTARARICTSGSEAAAALDEFGSP-YVVKADGLAAGKG 152


>gi|319939245|ref|ZP_08013608.1| carbamoyl phosphate synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811641|gb|EFW07917.1| carbamoyl phosphate synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  N+P   G   ++   A +A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLNIPQPPGQTATNEEEAVAAARKIGFPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 133 KQLMEELKQPIPESEIVNTVEEAVDFAAKIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|299132942|ref|ZP_07026137.1| CoA-binding domain protein [Afipia sp. 1NLS2]
 gi|298593079|gb|EFI53279.1| CoA-binding domain protein [Afipia sp. 1NLS2]
          Length = 711

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 66/227 (29%), Gaps = 18/227 (7%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    V  S   A      +  P+ +         + +     +    
Sbjct: 28  EGKLVCDAYGIAVPGEGVAKSADEATKLASKMGYPVVMKIVSPDILHKTEAGGVVVGVKD 87

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
               +                   L   +     +++  + V+       E+ +  + D 
Sbjct: 88  DAAAKAAYD-------------QILANAKKYKADAKIEGIQVQQMLMGGTEVIVGSITDD 134

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           + G    +A   GG+ +E +     +       D L  +       +   +       R 
Sbjct: 135 SFGK--LVAFGLGGVLVEVLKDITFRLAPATKEDALSMLDGIQAKEMLHGVRGGDPVNRD 192

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
              ++   + +   D  ++  L++NP+   K       D +I  D N
Sbjct: 193 ALANIIVGVSQLVTDFPEIVELDLNPVFATK-KDAIAADVRIVVDFN 238


>gi|253751581|ref|YP_003024722.1| carbamoyl-phosphate synthase large chain [Streptococcus suis SC84]
 gi|253753482|ref|YP_003026623.1| carbamoyl-phosphate synthase large chain [Streptococcus suis P1/7]
 gi|253755692|ref|YP_003028832.1| carbamoyl-phosphate synthase large chain [Streptococcus suis BM407]
 gi|251815870|emb|CAZ51481.1| carbamoyl-phosphate synthase large chain [Streptococcus suis SC84]
 gi|251818156|emb|CAZ55953.1| carbamoyl-phosphate synthase large chain [Streptococcus suis BM407]
 gi|251819728|emb|CAR45577.1| carbamoyl-phosphate synthase large chain [Streptococcus suis P1/7]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  K      +P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 667 RDLFEKALKDLGIPQPPGQTATNEEEALEAARKIGFPVLVRPSYVLGG 714



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 133 KQLMEDLNQPIPESTIVTTVDEALEFAAEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|268590435|ref|ZP_06124656.1| acetyltransferase, GNAT family [Providencia rettgeri DSM 1131]
 gi|291314350|gb|EFE54803.1| acetyltransferase, GNAT family [Providencia rettgeri DSM 1131]
          Length = 881

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 98/278 (35%), Gaps = 49/278 (17%)

Query: 4   HEY--QAKA-------------LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ 48
           HEY  QA               +L+ Y +      +  S + A    + +  P+ +    
Sbjct: 468 HEYIQQALENNKLHLDTHEVQPILKAYGLNSLPTWIAHSSNEAIEIAEKIGYPVAL---- 523

Query: 49  IHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
                + +       ++ +G +    + K V    + I+        T    +R+  + V
Sbjct: 524 -----KLRSPDIVHKSEVQGVMLYLRNAKEVEDAAKAIMERV----STNFPNARIEGLLV 574

Query: 109 EDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEE-------VAKDYPQKIFKLLI 159
           +  A+    +EL +++ +D   G +  +   +GG++ ++       +          L+I
Sbjct: 575 QSMANRAGAQELRIAVELDPVFGPLIMLG--EGGIEWQQESQAAVALPPLNMALARYLVI 632

Query: 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR 218
           + + G        +     L+    I    L   +     D  +++ L+I+PL+   +  
Sbjct: 633 NAIKGY------KIKSRSALEPLNIIGLSALLVRVSNLIIDCPNITRLDIHPLLASGD-E 685

Query: 219 LRVLDSKISFD--DNALYRHLDIQELRDVSEEDSREIE 254
             +LD  ++    D+A    L I+      EE     E
Sbjct: 686 FTLLDVSMALSPTDDATTSRLAIRPYPSELEETIHLKE 723


>gi|99082634|ref|YP_614788.1| CoA-binding [Ruegeria sp. TM1040]
 gi|99038914|gb|ABF65526.1| CoA-binding [Ruegeria sp. TM1040]
          Length = 679

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 75/241 (31%), Gaps = 47/241 (19%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AKA L ++ + V +     SV AA +    +  P+ +           KG       
Sbjct: 476 EGEAKAWLARFGLRVPRSKPARSVVAARAVAADIGYPVAL-----------KGEGIAHKT 524

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           +         S + V      +                 +   VE+     + EL + + 
Sbjct: 525 EEGAVRLNLRSGQEVSDAAVAM---------------PTDRFLVEEMITGAVAELLVGVT 569

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQ 182
            D   G V  +A+  GG   E +       +           T+ D   +  +L   +G 
Sbjct: 570 KDPAHGFVLTLAA--GGTLTEVMQDSTSVLL---PASDSALSTALDSLRIAPLLKGYRGA 624

Query: 183 ARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
              D   +   +     Y     + +  +EINPLI   +  +           +AL R  
Sbjct: 625 PPADRAAIMRAIRAVEAYVIAEAEGLEEIEINPLICTPSDAVAA---------DALMRRK 675

Query: 238 D 238
           D
Sbjct: 676 D 676


>gi|196247705|ref|ZP_03146407.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           G11MC16]
 gi|196212489|gb|EDY07246.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           G11MC16]
          Length = 1065

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L +  +P   G    SV  A +  + +  P+ V  S +  G
Sbjct: 672 QVLSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  ++ S+  A   ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIVHSLEEAYEFVQQIGYPVIV 168


>gi|220919960|ref|YP_002495263.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060]
 gi|219952380|gb|ACL62771.1| CoA-binding domain protein [Methylobacterium nodulans ORS 2060]
          Length = 722

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 81/217 (37%), Gaps = 18/217 (8%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y +PV K  V +S  AA  A + +  P+ V+K               L     GGV V  
Sbjct: 48  YGIPVPKEAVATSAEAAVQAAEEMGFPV-VLKIV---------SPDILHKTEAGGVIVGV 97

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S    ++D  + +   L   +     +R++ V ++       E+ +  + D + G    +
Sbjct: 98  SSAQAVADGYKTI---LANAKRYKADARIDGVQIQQMLKGGTEVIIGAVTDGSFGK--LV 152

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
           A   GG+ +E +     +       D L  +     A +   +   +   R    D+   
Sbjct: 153 AFGLGGILVEALKDITFRLAPATREDALSMLDGIQAAEMLKGVRGSEPVDRAALVDVIVK 212

Query: 194 LYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
           + +   D  ++S L++NP+     G     D +I  D
Sbjct: 213 VSQLVTDFPEISELDLNPVFASARG-ATAADVRIVMD 248


>gi|50084464|ref|YP_045974.1| cyanophycin synthetase [Acinetobacter sp. ADP1]
 gi|49530440|emb|CAG68152.1| Cyanophycin synthetase [Acinetobacter sp. ADP1]
          Length = 914

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 15/77 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+   +PV K  V+  +  A  A + +  P+                 K L  +   G
Sbjct: 224 QLLQDLGLPVPKQRVVYDIDDAVRAARRVGFPVV---------------LKPLDGNHGRG 268

Query: 70  VRVESSLKSVISDIREI 86
           V V  +    +    +I
Sbjct: 269 VSVNLTTDEAVEAAFDI 285


>gi|223934161|ref|ZP_03626102.1| carbamoyl-phosphate synthase, large subunit [Streptococcus suis
           89/1591]
 gi|302023698|ref|ZP_07248909.1| carbamoyl phosphate synthase large subunit [Streptococcus suis
           05HAS68]
 gi|223897167|gb|EEF63587.1| carbamoyl-phosphate synthase, large subunit [Streptococcus suis
           89/1591]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  K      +P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 667 RDLFEKALKDLGIPQPPGQTATNEEEALEAARKIGFPVLVRPSYVLGG 714



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   N P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 133 KQLMEDLNQPIPESTIVTTVDEALEFAAEIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|290967738|ref|ZP_06559293.1| phosphoribosylamine--glycine ligase [Megasphaera genomosp. type_1
           str. 28L]
 gi|290782254|gb|EFD94827.1| phosphoribosylamine--glycine ligase [Megasphaera genomosp. type_1
           str. 28L]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 25/136 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KY++P A   V S    A+  I+    P+ V+K+   A G+             
Sbjct: 106 AKELMAKYHIPTASYAVFSEAAPAKDYIRKKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++  +  +  +    +  ++ G +G     + +E+  +      +S+L    
Sbjct: 152 -GVVVARTVEEALRAVDTM----MKERRFGTSGG---RIVIEECMEGEE---VSVLAFVD 200

Query: 128 SGMVAFIASTQGGMDI 143
              +  + S Q    I
Sbjct: 201 GTHIVPMVSAQDHKRI 216


>gi|258424196|ref|ZP_05687077.1| predicted protein [Staphylococcus aureus A9635]
 gi|257845462|gb|EEV69495.1| predicted protein [Staphylococcus aureus A9635]
          Length = 408

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 31/191 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ L  K+NVP  K   I S   A+     +  P  V+K                   S 
Sbjct: 115 ARDLFLKFNVPSPKYKAIRSYEEAKEFADLIGYP-LVLKP--------------TNTASS 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV-YVEDGADILRELYLSLLVDR 126
             V +  +   + S + E+L       +    G +VN +  +E+     +E  + L ++ 
Sbjct: 160 QFVSLIHNQSQLKSSLEELLN-----FKESYMGFKVNDIFLIEEFMR-GQEYSIELFLNS 213

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQ--KIFKLLIDPLIGVTSEDVASLCDMLELQ-GQA 183
                      +    ++     + +   I    ID      ++   +    L ++ G  
Sbjct: 214 GKTEFL-----EVTKKLKSKPPYFVELGHIIPAPIDNKSEF-AKIAENGAKALGIENGPL 267

Query: 184 RIDGGDLFPNL 194
            I+  D    L
Sbjct: 268 HIEVIDTIDGL 278


>gi|148242079|ref|YP_001227236.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           RCC307]
 gi|147850389|emb|CAK27883.1| Carbamoylphosphate synthase large subunit [Synechococcus sp.
           RCC307]
          Length = 1100

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + +S+  AE+    +     +++     GG G G           
Sbjct: 133 KQAMERIGVGVCPSGIATSMEEAEAVGNQIGSYPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +              +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFRALC-----------NSGLEASPVDQILIEKSLLGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268



 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 21/67 (31%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LRK  +      +  S   A +  + +  P+ V  S +  G   +  F     D      
Sbjct: 706 LRKLQIRQPANGIARSEDEARAIAERIGYPVVVRPSYVLGGRAMEVVFGADELDRYMREA 765

Query: 72  VESSLKS 78
           V+     
Sbjct: 766 VQVDPDQ 772


>gi|119489253|ref|ZP_01622060.1| acetyl-CoA carboxylase [Lyngbya sp. PCC 8106]
 gi|119454727|gb|EAW35872.1| acetyl-CoA carboxylase [Lyngbya sp. PCC 8106]
          Length = 451

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++++   A      +  P+ ++K+    GGRG    +E    
Sbjct: 120 AKETMQKVGVPTVPGSDGLVTNEKEAAKIALQIGYPV-IIKATAGGGGRGMRLVREPSEL 178

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           SK          +   +     G+                VY+E   ++ R +   +L D
Sbjct: 179 SKQ-------FSAAQGEAEAAFGNP--------------GVYLEKFIELPRHIEFQILAD 217

Query: 126 RTSGMV 131
               ++
Sbjct: 218 GHGNVI 223


>gi|319649635|ref|ZP_08003791.1| carbamoyl-phosphate synthase large subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317398797|gb|EFV79479.1| carbamoyl-phosphate synthase large subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 1070

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           L +  +P+ KG    SV  A +    +  P+ V  S +  G   +  +KE 
Sbjct: 674 LAELGIPMPKGKTALSVEQAVAVAGEIGYPVVVRPSYVLGGRAMEIVYKEA 724


>gi|171778241|ref|ZP_02919447.1| hypothetical protein STRINF_00287 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282941|gb|EDT48365.1| hypothetical protein STRINF_00287 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A   +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAVEAAHKIGFPVLVRPSYVLGG 714



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + N P+ +  ++++V  A +  +++  P+ V  +    G                
Sbjct: 133 KQLMEELNQPIPESEIVNTVDEAVAFAESIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  +  + + +       L  + +T+ 
Sbjct: 178 GGGMCDNEEELREIAENGLKLSPVTQC 204


>gi|148239765|ref|YP_001225152.1| carbamoyl phosphate synthase large subunit [Synechococcus sp. WH
           7803]
 gi|147848304|emb|CAK23855.1| Carbamoylphosphate synthase large subunit [Synechococcus sp. WH
           7803]
          Length = 1107

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS+  A++   ++     +++     GG G G           
Sbjct: 133 KQAMERIGVKVCPSGIASSMDEAKAVGDSIGSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L ++            V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFDAICKSGLDAS-----------PVSQILIEKSLIGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|163754343|ref|ZP_02161465.1| hypothetical protein KAOT1_15648 [Kordia algicida OT-1]
 gi|161325284|gb|EDP96611.1| hypothetical protein KAOT1_15648 [Kordia algicida OT-1]
          Length = 336

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 70/204 (34%), Gaps = 37/204 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            + +KY VP+ +G V+S+  A +  +        + K+      +G   F +        
Sbjct: 146 EIAKKYGVPIPRGYVVSTKKALKKVLDATDASFVITKA----ISQGVYHFTKEYGYYTYT 201

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY-LSLLVDRTS 128
            R+    +  ++ + +    +LI ++          V+      +  E Y +++   +  
Sbjct: 202 ERIT---EESLAALPDRFFPSLIQEEIKKKYEL--RVF-----YLNEEFYAMAIFSQKCK 251

Query: 129 GMVA-FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             V  F   T       +V  + P+ +   LI             + + LEL   +    
Sbjct: 252 DTVVDFRKHTDQDSPQRKVPYNLPEHVKTGLI------------KIMNELELNTGSIDIL 299

Query: 188 GDLFPNLYKAFCDKDMSLLEINPL 211
            D          D +   LE+NP+
Sbjct: 300 VD---------EDNNYIFLEVNPV 314


>gi|325695911|gb|EGD37802.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK160]
          Length = 1059

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELHIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|293366832|ref|ZP_06613508.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|291319133|gb|EFE59503.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329736674|gb|EGG72940.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis VCU045]
          Length = 1057

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LLR+  VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLREIAVPQPQGKTATSPKEALENAREIGYPVVVRPSYVL-GGRAMEIVDNDQE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|293381990|ref|ZP_06627951.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           crispatus 214-1]
 gi|312977043|ref|ZP_07788792.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           crispatus CTV-05]
 gi|290921446|gb|EFD98487.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           crispatus 214-1]
 gi|310896371|gb|EFQ45436.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           crispatus CTV-05]
          Length = 460

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 5   EYQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           E+ A+ L+  +NVPV  G   VI +   A+     +  P+ +
Sbjct: 117 EH-ARQLMMAHNVPVTPGSNGVIKNAEEAKKIAAQIGYPVLI 157


>gi|257868001|ref|ZP_05647654.1| phosphoribosylamine-glycine ligase [Enterococcus casseliflavus
           EC30]
 gi|257874331|ref|ZP_05653984.1| phosphoribosylamine-glycine ligase [Enterococcus casseliflavus
           EC10]
 gi|257802084|gb|EEV30987.1| phosphoribosylamine-glycine ligase [Enterococcus casseliflavus
           EC30]
 gi|257808495|gb|EEV37317.1| phosphoribosylamine-glycine ligase [Enterococcus casseliflavus
           EC10]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+R   +P A     +    A++ I+ L G   V+K+   A G+             
Sbjct: 107 AKELMRDNQIPTADYQSFTDSAQAKAYIQ-LKGAPIVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + +  +L         G +G+    V +E+      E  L   V   
Sbjct: 153 -GVVVAETVDEANAAVEAMLEQ----NAFGESGA---KVVIEEFL-AGEEFSLLAFVKDE 203

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 204 AVYPMVIA 211


>gi|251810633|ref|ZP_04825106.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282876365|ref|ZP_06285232.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis SK135]
 gi|251805793|gb|EES58450.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295390|gb|EFA87917.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis SK135]
          Length = 1057

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LLR+  VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLREIAVPQPQGKTATSPKEALENAREIGYPVVVRPSYVL-GGRAMEIVDNDQE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|146342157|ref|YP_001207205.1| hypothetical protein BRADO5307 [Bradyrhizobium sp. ORS278]
 gi|146194963|emb|CAL78988.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 897

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 45/237 (18%)

Query: 10  ALLRKYNVP-VAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADS 66
            LL  Y++  V      SSV  A +    L   G   V+K           R     +D 
Sbjct: 499 RLLEAYDIAMVPTF-AASSVDEAVAYANQLFAQGATVVLKI--------LSRDIVHKSDV 549

Query: 67  KGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G V   ++ ++V     EI+     +      +G  V  + V       REL + +  D
Sbjct: 550 GGVVLNLTTAEAVRKAAHEIMARAKAVRPDARISGVIVQAMVVRAK---ARELIMGIADD 606

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------------AS 172
            T G V      +GG  +E +             D  +G+   D+               
Sbjct: 607 PTFGTVIVFG--RGGTAVEVIN------------DKALGLPPLDLHLARNLIERTRVSRL 652

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           L    ++          +   L +   D  ++  L+INPL+  ++G +  +D++++ 
Sbjct: 653 LRAYRDVPAVKPDAVAMVLVKLAQLAADVPEIRELDINPLLADESG-VMAVDARVAV 708



 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 33/192 (17%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
           A +R   +  + D+ E       A+           ++  + NG G+ +  +D +   GG
Sbjct: 266 AAFRRAGVLRVSDLRELFDC---AETLGRVESPTGKSLAILTNGGGIGVLAIDRLVELGG 322

Query: 292 APA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIF 329
            PA                     N +D+ G AD  +     + + +D +   IL+ N+ 
Sbjct: 323 IPALLSPSVHDRLDAVLPPTWSGSNPVDIVGDADAARYTTVLEALLADQANDAILVMNVQ 382

Query: 330 GGIMRCDVLVKGI---LSAVKEVKINI--PLVMRLEGANVDIGNRLIAESGLNVITAIDL 384
             I     +   +   +SA ++       P++    GA        ++ +G+      D 
Sbjct: 383 TAIASASEIASAVTEFVSAYRKQHRRWAKPVLAAWVGA-EQQVIESLSGAGIPNYPTED- 440

Query: 385 DDAAQKIVHAVK 396
            DA +  +H V+
Sbjct: 441 -DAVRGFMHLVR 451


>gi|27467797|ref|NP_764434.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           epidermidis ATCC 12228]
 gi|38257574|sp|Q8CPJ4|CARB_STAES RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|27315341|gb|AAO04476.1|AE016746_266 carbamoyl-phosphate synthase large chain [Staphylococcus
           epidermidis ATCC 12228]
 gi|329729964|gb|EGG66355.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis VCU144]
 gi|329736345|gb|EGG72617.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis VCU028]
          Length = 1057

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LLR+  VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLREIAVPQPQGKTATSPKEALENAREIGYPVVVRPSYVL-GGRAMEIVDNDQE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|313672969|ref|YP_004051080.1| carbamoyl-phosphate synthase large subunit [Calditerrivibrio
            nitroreducens DSM 19672]
 gi|312939725|gb|ADR18917.1| carbamoyl-phosphate synthase large subunit [Calditerrivibrio
            nitroreducens DSM 19672]
          Length = 1077

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 116/398 (29%), Gaps = 80/398 (20%)

Query: 9    KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
            K L+ K  +      +  +   A    + +  P+ V  S +  G                
Sbjct: 680  KKLVEKLGILQPNNGIARNPEEAFKIAEEIGYPVVVRPSYVLGG---------------R 724

Query: 69   GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             + +            E L + +           V    ++   D   EL +  + D  +
Sbjct: 725  AMEIVYD--------SEALANYMKFAVEASEKHPV---LIDKFLDNAIELDVDAISDGET 773

Query: 129  GMVAFIAST--QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             +VA I     + G+   + A   P +     I   +   ++ +A    +L L       
Sbjct: 774  VVVAGIMQHIEEAGIHSGDSACSIPPRTISEDIKIKVIKITKQLAYELKVLGLMNIQF-- 831

Query: 187  GGDLFPNLYKAFCDKDMSLLEINP--------LIIMKNGRLRVLDSKISFDDNALYRHLD 238
                      A  D D+ +LE+NP        +       L  L +K+            
Sbjct: 832  ----------AIKDNDIYILEVNPRASRTVPFVSKTIGVPLAKLAAKVMVGQ-------K 874

Query: 239  IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
            +++L   +E D      K+    ++   G    +          M I   +G        
Sbjct: 875  LKDLGFTNEVDIPFFTVKEAVFPFVKFPGTDPILGPEMKSTGEVMGIDVTFG-------- 926

Query: 299  VGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358
                    K     ++   +   K   + I       D + K I+   KE       ++ 
Sbjct: 927  --------KAYYKAQMAAGNKLPKSGKVFI----SVKDSVKKDIIPIAKEFDRLGFNIVA 974

Query: 359  LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
              G        L+ E+G+NV     + D    IV  +K
Sbjct: 975  TAGT-----YNLLKENGINVEFVKKVQDGRPNIVDLIK 1007


>gi|295703486|ref|YP_003596561.1| pyruvate carboxylase [Bacillus megaterium DSM 319]
 gi|294801145|gb|ADF38211.1| pyruvate carboxylase [Bacillus megaterium DSM 319]
          Length = 1149

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 68/204 (33%), Gaps = 35/204 (17%)

Query: 14  KYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + ++PV  G    I S+  A+        P  ++K+ +  GGRG    ++  +       
Sbjct: 132 QADIPVIPGTDGPIDSIDEAKEFANQHGYP-LMIKAALGGGGRGMRIVRDADS------- 183

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  S     S+ +   G+                VYVE   +  + + + +L D    +V
Sbjct: 184 LNESYDRAKSEAKAAFGND--------------EVYVEKLVENPKHIEVQILGDEQGNVV 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
                 +    ++   +   +    + ID    +      +   ++E          +  
Sbjct: 230 HLY---ERDCSVQRRHQKVVEVAPSVSID--EDLRLRICEAAVQLMEKVQYINAGTVEFL 284

Query: 192 PNLYKAFCDKDMSLLEINPLIIMK 215
            +        D   +E+NP + ++
Sbjct: 285 VS------GNDFYFIEVNPRVQVE 302


>gi|282897085|ref|ZP_06305087.1| Phosphoribosylglycinamide synthetase [Raphidiopsis brookii D9]
 gi|281197737|gb|EFA72631.1| Phosphoribosylglycinamide synthetase [Raphidiopsis brookii D9]
          Length = 428

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+L+++  VP AK  V  S H A+  ++    P+ V+K+   A G+             
Sbjct: 108 AKSLMQEAGVPTAKAAVFDSAHLAKIYVQQQGVPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      I  I        Q G  G   NCV +E+   + +E+ +  + D  
Sbjct: 154 -GVTVAETLTQAEMAIDAIF-----QGQFGSAG---NCVVIEEYL-LGQEVSVLAITDGV 203

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 204 TIRPLLPA 211


>gi|138893924|ref|YP_001124377.1| phosphoribosylamine--glycine ligase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196250526|ref|ZP_03149217.1| phosphoribosylamine--glycine ligase [Geobacillus sp. G11MC16]
 gi|134265437|gb|ABO65632.1| Phosphoribosylamine-glycine ligase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210016|gb|EDY04784.1| phosphoribosylamine--glycine ligase [Geobacillus sp. G11MC16]
          Length = 430

 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----KGRFKELP 63
           AK L++ Y +P A+    SS   A++ I+    P+ V+K+   A G+G    +   + L 
Sbjct: 106 AKELMKTYGIPTAEHATFSSYEEAKAYIEEKGAPI-VIKADGLAAGKGVTVAQTVEEALA 164

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           A     V  +         I E L     +      G +V  + +    D  R  
Sbjct: 165 AAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQ--DHKRAY 217


>gi|318061652|ref|ZP_07980373.1| phosphoribosylamine--glycine ligase [Streptomyces sp. SA3_actG]
 gi|318081581|ref|ZP_07988896.1| phosphoribosylamine--glycine ligase [Streptomyces sp. SA3_actF]
 gi|333025583|ref|ZP_08453647.1| putative phosphoribosylamine-glycine ligase [Streptomyces sp.
           Tu6071]
 gi|332745435|gb|EGJ75876.1| putative phosphoribosylamine-glycine ligase [Streptomyces sp.
           Tu6071]
          Length = 421

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    ++A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAQVPTARAYVCTTPEEVDAALDAFGAP-YVVKDDGLAAGKG 152


>gi|302670234|ref|YP_003830194.1| phosphoribosylamine-glycine ligase PurD [Butyrivibrio
           proteoclasticus B316]
 gi|302394707|gb|ADL33612.1| phosphoribosylamine-glycine ligase PurD [Butyrivibrio
           proteoclasticus B316]
          Length = 426

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A         AA   ++    P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYETFDDPQAALEYLENAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L+     +REI    +  K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICQNLEEARDGVREI----MEDKKFGDAG---NHMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
                 ++S Q 
Sbjct: 201 GKTYKLMSSAQD 212


>gi|183598083|ref|ZP_02959576.1| hypothetical protein PROSTU_01446 [Providencia stuartii ATCC 25827]
 gi|188020240|gb|EDU58280.1| hypothetical protein PROSTU_01446 [Providencia stuartii ATCC 25827]
          Length = 881

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 83/226 (36%), Gaps = 33/226 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +  S   A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLNSLPTWIAHSSDEAIEIAEKIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    + K V    + I+        T    +R+  + V+  A+    +EL
Sbjct: 531 VHKSEVQGVMLYLRNAKEVGDAAKAIMERV----STNFPNARIEGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYP-------QKIFKLLIDPLIGVTSEDVA 171
            +++ +D   G +  +   +GG++ ++ ++               L+I  + G       
Sbjct: 587 RIAVELDPVFGPLIMLG--EGGIEWQQESQAAVALPPLNLALARYLVIQAIKGYKI-KAR 643

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           S    L + G        L   +     D  +++ L+I+PL+   +
Sbjct: 644 SALAPLNIPG-----LASLLVRVSNLIIDCPNIARLDIHPLLASGD 684


>gi|163756434|ref|ZP_02163547.1| carbamoyl-phosphate synthase large subunit [Kordia algicida OT-1]
 gi|161323542|gb|EDP94878.1| carbamoyl-phosphate synthase large subunit [Kordia algicida OT-1]
          Length = 951

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A +    L  P+ V  S +  G                G+
Sbjct: 691 LLKENNIPYPEFGVAENADEALALADELDFPILVRPSYVLGG---------------QGM 735

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + +   + ++L   
Sbjct: 736 KIVINKQELEETVVDLLRKI 755


>gi|300709569|ref|YP_003735383.1| ribosomal protein S6 modification protein [Halalkalicoccus jeotgali
           B3]
 gi|299123252|gb|ADJ13591.1| ribosomal protein S6 modification protein [Halalkalicoccus jeotgali
           B3]
          Length = 288

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VP     V  +  AA  +I+    P  V+K  + + GR   + +           
Sbjct: 97  LASAGVPTPDTDVAFTTEAALESIENFGYPC-VLKPVMGSWGRLMAKLES---------- 145

Query: 72  VESSLKSVISDIREILGS 89
              S    I + +E LG 
Sbjct: 146 --RSAAEAILEHKETLGH 161


>gi|260893545|ref|YP_003239642.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Ammonifex degensii KC4]
 gi|260865686|gb|ACX52792.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Ammonifex degensii KC4]
          Length = 699

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 71/184 (38%), Gaps = 33/184 (17%)

Query: 231 NALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           +A +R   +  ++ + E  D   + A+Q     I     +  + N  G  + T D ++  
Sbjct: 265 DAAFRQAGVIRVQSMRELFDLAVVFARQP----IPRGRRVAVVTNAGGPGIVTADSVERQ 320

Query: 290 GGAPANF---------------------LDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           G   A F                     +DV G A  D+   A + + +D +V G+L+ +
Sbjct: 321 GLEMARFSRETAEELRSQLPREASVFNPVDVLGDARVDRFQVAIEKVLADENVDGVLVLL 380

Query: 329 FGGIMRCDVLVKGILSAVKEVKI---NIPLV-MRLEGANVDIGNRLIAESGLNVITAIDL 384
                      +G+   + E+     + P++ + + G ++  G  ++  +G+   T  +L
Sbjct: 381 C---PTAVSDPEGVARVMAELHARFSHKPMLGVFMGGESMAGGVEILNLAGIPCFTFPEL 437

Query: 385 DDAA 388
              A
Sbjct: 438 AVGA 441


>gi|303243793|ref|ZP_07330133.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanothermococcus okinawensis IH1]
 gi|302485729|gb|EFL48653.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Methanothermococcus okinawensis IH1]
          Length = 704

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 73/218 (33%), Gaps = 22/218 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           EY +K  L+ + + V +  +  ++  AE     L   +  + S                 
Sbjct: 492 EYNSKEFLKIHGMNVPRKYLAKTIEEAEDYASKLDNIVMKISS-------------PNIM 538

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  V    K +      I+ +     +       ++ V +E+  +   E+ +    
Sbjct: 539 HKSDAGCVIVKPKDIKEAFNTIMENGKKYLEKNRIKGVIDGVLIEEYIE-GLEVIVGGKR 597

Query: 125 DRTSGMVAFIASTQGGMDIE---EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   G V  +    GG+ +E   +V+           +D L  + S  V  L  +     
Sbjct: 598 DPVFGPVVMVG--LGGVFVEVLKDVSFGIYPITKDYALDMLRELKSYKV--LEGIRGRPK 653

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR 218
           +      D+   L        ++  ++INPL + ++G+
Sbjct: 654 RDINFIVDIMIRLGVIMDIYPEIKEIDINPLFVKEDGK 691


>gi|297622731|ref|YP_003704165.1| carbamoyl-phosphate synthase large subunit [Truepera radiovictrix
           DSM 17093]
 gi|297163911|gb|ADI13622.1| carbamoyl-phosphate synthase, large subunit [Truepera radiovictrix
           DSM 17093]
          Length = 1027

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 53/171 (30%), Gaps = 37/171 (21%)

Query: 9   KALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L     RK  +    G ++ S+  A   + T+  P  +  S    G            
Sbjct: 129 RELFQAAMRKIGIKTPAGKMVGSLEEALDFVATIGYPAIIRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV            +R            G   S V+ V VE      +E  L ++ 
Sbjct: 177 -TGGGV--AYDEAEFRQIVRR-----------GLHDSPVHTVLVEQSVLGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE V          + + P   ++ ++   L D
Sbjct: 223 D-HNDTVVIICS------IENVDPMGVHTGDSITVAPAQTLSDKEYQRLRD 266


>gi|296454536|ref|YP_003661679.1| carbamoyl-phosphate synthase large subunit [Bifidobacterium longum
           subsp. longum JDM301]
 gi|296183967|gb|ADH00849.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 1127

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A  A   +  P+ V  S +  GGRG     E+  D K  
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAMDAAHRIGYPVLVRPSYVL-GGRGM----EIVYDDKQL 736

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
            +        +++ +           T  +G   + + ++       E+ +  L D    
Sbjct: 737 TKYV---DRALAEAKA---------DTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|224371825|ref|YP_002605989.1| CarB2 [Desulfobacterium autotrophicum HRM2]
 gi|223694542|gb|ACN17825.1| CarB2 [Desulfobacterium autotrophicum HRM2]
          Length = 1074

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 68/222 (30%), Gaps = 49/222 (22%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +      +  ++  A +  + +  P+ V  S +  G   K  +     +    
Sbjct: 679 EMLDKLGIAQPANGIAVNIEEAYAVAEKIGYPVMVRPSFVLGGRAMKIVYDRSALEEYFN 738

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + V +S                            + V ++   +   EL +  + D  + 
Sbjct: 739 LAVLASPD--------------------------HPVLIDQFLEDAFELDVDAISDGENT 772

Query: 130 MVAFIASTQGGM--DIEEVAKDY--------PQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           ++       GGM   IEE             P  I K+ ID +     E   +L   L++
Sbjct: 773 VI-------GGMMEHIEEAGIHSGDSACVLPPYSISKVHIDEMT----EAAKALAKELKV 821

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           +G   I  G +   +Y    + +       P +    G    
Sbjct: 822 KGLMNIQFGIMDDKVY--VIEVNPRASRTIPFVSKATGVPLA 861



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 32/138 (23%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    K  + + +     ++   E+    +  P+ V  S    G            
Sbjct: 129 RELFRDAMNKIGLRIPESGFAHNMAEVETISARIGFPIIVRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    + + +    +  L +++IT            V +E+     +E  L ++ 
Sbjct: 177 -TGGGV--AYNPEELADLAKSGLDASMIT-----------QVMLEESVLGWKEYELEVM- 221

Query: 125 DRTSGMVAFIASTQGGMD 142
            R       I  +   +D
Sbjct: 222 -RDHAGNVVIVCSIENID 238


>gi|241122966|ref|XP_002403742.1| GARS/AIRS/GART, putative [Ixodes scapularis]
 gi|215493517|gb|EEC03158.1| GARS/AIRS/GART, putative [Ixodes scapularis]
          Length = 996

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 22/125 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + K+ +P A+     +  +A++ I     P  VVK+   A G+             
Sbjct: 110 AKDFMAKHGIPTAQYQNFQNAESAKTYITNANFPALVVKASGLATGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +  +  IS +  I    +  K  G  G   + V VE+  D   E+ + +  D  
Sbjct: 157 -GVIVAADKREAISAVDTI----MKDKMVGAAG---DTVVVEELLD-GDEISVLVFSDGV 207

Query: 128 SGMVA 132
           +  V 
Sbjct: 208 NYSVM 212


>gi|149010481|ref|ZP_01831852.1| hypothetical protein CGSSp19BS75_03982 [Streptococcus pneumoniae
           SP19-BS75]
 gi|147764962|gb|EDK71891.1| hypothetical protein CGSSp19BS75_03982 [Streptococcus pneumoniae
           SP19-BS75]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|320009594|gb|ADW04444.1| phosphoribosylamine/glycine ligase [Streptomyces flavogriseus ATCC
           33331]
          Length = 417

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   NVP A+  V ++    + A+     P YVVK    A G+             
Sbjct: 106 AKDVMAGANVPTARSYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V   +++  +                      + V +E+  D
Sbjct: 152 -GVVVTDDVEAARAHA-----------------LACDRVVIEEFLD 179


>gi|261854886|ref|YP_003262169.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halothiobacillus neapolitanus c2]
 gi|261835355|gb|ACX95122.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halothiobacillus neapolitanus c2]
          Length = 371

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 57/185 (30%), Gaps = 38/185 (20%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +HE   K       +PVAK   I S    +SA+  L  P  ++K+            + L
Sbjct: 111 VHE---KRFFESLGIPVAKYHAIDSFEDLKSAVADLGYPC-ILKT------------RRL 154

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D KG V V  S   +      I G+  I               +E      RE  +S+
Sbjct: 155 GYDGKGQVVVRHS-DDLEPAWASIRGNPSI---------------LEQMIPFTRE--VSI 196

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +  R++                 +       +     DP      E    + D L+  G 
Sbjct: 197 ISVRSTRGECAFYPVSENQHRSGILHRTEIHMD----DPAQERAEEYARHVLDGLDYVGV 252

Query: 183 ARIDG 187
             I+ 
Sbjct: 253 LAIEF 257


>gi|42569706|ref|NP_181305.2| phosphoribosylaminoimidazole carboxylase, putative / AIR
           carboxylase, putative [Arabidopsis thaliana]
 gi|28973715|gb|AAO64174.1| putative phosphoribosylaminoimidazole carboxylase [Arabidopsis
           thaliana]
 gi|30793959|gb|AAP40431.1| putative phosphoribosylaminoimidazole carboxylase [Arabidopsis
           thaliana]
 gi|110737176|dbj|BAF00537.1| phosphoribosylaminoimidazole carboxylase like protein [Arabidopsis
           thaliana]
 gi|330254341|gb|AEC09435.1| phosphoribosylaminoimidazole carboxylase [Arabidopsis thaliana]
          Length = 642

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 31/155 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             ++ +P+ + + IS +  A  A +    PL +   ++   GRG                
Sbjct: 197 FSQHGIPLPEFMEISDIEGARKAGELFGYPLMIKSKRLAYDGRGNA-------------- 242

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V ++   + S +  +             G     +Y+E  A  ++EL + +   R   MV
Sbjct: 243 VANNQDELSSAVTAL-------------GGFSRGLYIEKWAPFVKELAVIVARGRDGSMV 289

Query: 132 AF----IASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
            +             I +   D P KI KL  D  
Sbjct: 290 CYPVVETIHRDNICHIVKAPADVPWKINKLATDVA 324


>gi|258616411|ref|ZP_05714181.1| phosphoribosylamine/glycine ligase [Enterococcus faecium DO]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 46/132 (34%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMDTYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G     + VE+      E  L L   R 
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GDSSKKIVVEEFL-AGEEFSL-LAFVRN 202

Query: 128 SGMVAFIASTQG 139
           + +   + S   
Sbjct: 203 TKVYPMVISQDH 214


>gi|225574394|ref|ZP_03783004.1| hypothetical protein RUMHYD_02463 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038396|gb|EEG48642.1| hypothetical protein RUMHYD_02463 [Blautia hydrogenotrophica DSM
           10507]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 59/253 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A          A   ++    P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYQIPTAAYENFEDPQKALEYLEKAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + +SL+     ++EI    ++ K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNSLEEAKDGVKEI----MLDKKFGTAG---NTLVVEEFMTGRE---VSVLSYVD 200

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLID---------PLIGVTSED 169
              +  + S Q          G++   +    P   +   ID         P +     +
Sbjct: 201 GTTIKTMTSAQDHKRAKDGDQGLNTGGMGTFSPSPFYTKEIDEYCQKHIYQPTVDAMRAE 260

Query: 170 VASLCDMLELQGQARIDGGDLFPNLYKA-FCDKDMSLLEINPLIIMKNGRL----RVLDS 224
                 ++         G  +    Y A F D +  ++    L  MKN  +      +D 
Sbjct: 261 GRPFTGIIFFGLMLTEQGPKVLE--YNARFGDPEAQVV----LPRMKNDIVEVMEACIDG 314

Query: 225 KIS-----FDDNA 232
           K+      F+DNA
Sbjct: 315 KLDEIELQFEDNA 327


>gi|57866726|ref|YP_188352.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           epidermidis RP62A]
 gi|242242485|ref|ZP_04796930.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           epidermidis W23144]
 gi|81819410|sp|Q5HPY8|CARB_STAEQ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|57637384|gb|AAW54172.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis RP62A]
 gi|242234059|gb|EES36371.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           epidermidis W23144]
          Length = 1057

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LLR+ +VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLREISVPQPQGKTATSPKEALKNAREIGYPVVVRPSYVL-GGRAMEIVDNDQE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|241948777|ref|XP_002417111.1| urea amidolyase (including urea carboxylase and allophanate
           hydrolase), putative [Candida dubliniensis CD36]
 gi|223640449|emb|CAX44701.1| urea amidolyase (including urea carboxylase and allophanate
           hydrolase), putative [Candida dubliniensis CD36]
          Length = 1813

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    ++     A      L  P+ V KS    GG G  +      
Sbjct: 730 HSAREIAEKAGVPLVPGSGLVKDAKEAREIAAKLEYPIMV-KSTAGGGGIGLQK------ 782

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S              + V++E   +  R + + +L 
Sbjct: 783 -----VDSEKDIERVFETVQHQGKSYFGD----------SGVFLERFVENARHVEIQMLG 827

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L      +
Sbjct: 828 DGNGNAIAV------GERDCSLQRRNQKIIEETPAPNLPEETRSKMRKAAESLGSTM--K 879

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 880 YKCAGTVEYIYDP-KRDEFYFLEVNA 904


>gi|218780393|ref|YP_002431711.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761777|gb|ACL04243.1| Acetyl-CoA carboxylase, biotin carboxylase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 462

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VPV       + +V  A+   K +  P+ V  S                  
Sbjct: 119 AKTAMQKAGVPVTPSSPGGVDTVAEAKEFAKEIGYPIMVKAS---------------GGG 163

Query: 66  SKGGVRVESSLKSVISD--IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              G+++  + + V  +  + ++ G T               VYVE      R +   +L
Sbjct: 164 GGRGIKICFNDEEVEEEFPMAKMEGRTAFGNDE---------VYVEKFLTKPRHIEFQIL 214

Query: 124 VDRTSGMV 131
            D+   ++
Sbjct: 215 ADKQGNVI 222


>gi|149026370|ref|ZP_01836525.1| hypothetical protein CGSSp23BS72_01737 [Streptococcus pneumoniae
           SP23-BS72]
 gi|147929332|gb|EDK80331.1| hypothetical protein CGSSp23BS72_01737 [Streptococcus pneumoniae
           SP23-BS72]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|94499635|ref|ZP_01306172.1| Acyl-CoA synthetase (NDP forming) [Oceanobacter sp. RED65]
 gi|94428389|gb|EAT13362.1| Acyl-CoA synthetase (NDP forming) [Oceanobacter sp. RED65]
          Length = 910

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 26/156 (16%)

Query: 264 ALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGG 301
            L G  +  + NG G A+  +D +   GG  A                     N +D+  
Sbjct: 299 PLKGERLAIVANGIGGAILAVDRLVHEGGQLATLSTSTIEKLSEILPPYWSQSNPVDITP 358

Query: 302 GADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
            A         +++  D +V  IL+      ++    +   +++ +K  + N+ L   + 
Sbjct: 359 EAGPKVYKKVLELVEQDPNVDAILVLFSPNSVVNPVDVANVVINHIKFHQKNL-LTSWMG 417

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           G +V+    +  ++G+   T    D A +  +H V+
Sbjct: 418 GESVERSRHVFDDAGIP--TYDTPDRAIKAFMHMVR 451


>gi|307067487|ref|YP_003876453.1| hypothetical protein SPAP_0862 [Streptococcus pneumoniae AP200]
 gi|306409024|gb|ADM84451.1| hypothetical protein SPAP_0862 [Streptococcus pneumoniae AP200]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|194398162|ref|YP_002037522.1| hypothetical protein SPG_0811 [Streptococcus pneumoniae G54]
 gi|194357829|gb|ACF56277.1| hypothetical protein SPG_0811 [Streptococcus pneumoniae G54]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|169833057|ref|YP_001694338.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168995559|gb|ACA36171.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|168490976|ref|ZP_02715119.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC0288-04]
 gi|183574629|gb|EDT95157.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC0288-04]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|168485834|ref|ZP_02710342.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC1087-00]
 gi|183571007|gb|EDT91535.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC1087-00]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|149924619|ref|ZP_01912973.1| cyanophycin synthetase [Plesiocystis pacifica SIR-1]
 gi|149814504|gb|EDM74091.1| cyanophycin synthetase [Plesiocystis pacifica SIR-1]
          Length = 957

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 18/132 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    +PV +  ++ S   A +  + L  P+ VVK      GRG      +       
Sbjct: 230 QILADLGLPVPRQYLVRSAERAATVARRLGYPV-VVKPLNANHGRG----VSINLGDAEA 284

Query: 70  VRVESSLKSVISDIREIL----------GSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
           VRV           R ++             ++  +      RV    V DG +   E  
Sbjct: 285 VRVAFDK--AREHSRTVIVETYIEGFDHRMLVVDGKLVAVAKRVPGHVVGDG-EHSVEEL 341

Query: 120 LSLLVDRTSGMV 131
           ++++       +
Sbjct: 342 VAIINADPRRGI 353


>gi|149002422|ref|ZP_01827356.1| hypothetical protein CGSSp14BS69_11876 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147759359|gb|EDK66351.1| hypothetical protein CGSSp14BS69_11876 [Streptococcus pneumoniae
           SP14-BS69]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|148993697|ref|ZP_01823144.1| hypothetical protein CGSSp9BS68_05365 [Streptococcus pneumoniae
           SP9-BS68]
 gi|148997031|ref|ZP_01824685.1| hypothetical protein CGSSp11BS70_09725 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149007170|ref|ZP_01830834.1| hypothetical protein CGSSp18BS74_04956 [Streptococcus pneumoniae
           SP18-BS74]
 gi|168490318|ref|ZP_02714517.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           SP195]
 gi|168493038|ref|ZP_02717181.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|168575543|ref|ZP_02721479.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           MLV-016]
 gi|221231661|ref|YP_002510813.1| hypothetical protein SPN23F_08060 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854391|ref|YP_002735903.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           JJA]
 gi|225856548|ref|YP_002738059.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           P1031]
 gi|225861223|ref|YP_002742732.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298231045|ref|ZP_06964726.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           str. Canada MDR_19F]
 gi|298254224|ref|ZP_06977810.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           str. Canada MDR_19A]
 gi|298503109|ref|YP_003725049.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           TCH8431/19A]
 gi|147756731|gb|EDK63771.1| hypothetical protein CGSSp11BS70_09725 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147761208|gb|EDK68175.1| hypothetical protein CGSSp18BS74_04956 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147927777|gb|EDK78800.1| hypothetical protein CGSSp9BS68_05365 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183571365|gb|EDT91893.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           SP195]
 gi|183577094|gb|EDT97622.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|183578453|gb|EDT98981.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           MLV-016]
 gi|220674121|emb|CAR68640.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225722752|gb|ACO18605.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           JJA]
 gi|225725218|gb|ACO21070.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           P1031]
 gi|225727377|gb|ACO23228.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238704|gb|ADI69835.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327390238|gb|EGE88581.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA04375]
 gi|332073214|gb|EGI83693.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA17570]
 gi|332076169|gb|EGI86635.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA41301]
 gi|332204888|gb|EGJ18953.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA47901]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|116330483|ref|YP_800201.1| carbamoyl phosphate synthase large subunit [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116124172|gb|ABJ75443.1| Carbamoyl-phosphate synthase (glutamine- hydrolyzing), large
           subunit [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 1106

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 31/134 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      V V    + +++  A    K L  PL V  +    G            
Sbjct: 129 RELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLGLPLIVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G    E + + V+S               G   S ++ V +E+     +E  L ++ 
Sbjct: 177 TGGGIAYTEETFEEVVS--------------KGLKASPISQVLLEESVLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           D  +  V  I S +
Sbjct: 223 D-LADNVVIICSIE 235


>gi|69246315|ref|ZP_00603888.1| Phosphoribosylglycinamide synthetase [Enterococcus faecium DO]
 gi|257878095|ref|ZP_05657748.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,230,933]
 gi|257881119|ref|ZP_05660772.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,502]
 gi|257889706|ref|ZP_05669359.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,410]
 gi|257892355|ref|ZP_05672008.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,408]
 gi|260559144|ref|ZP_05831330.1| phosphoribosylglycinamide synthetase [Enterococcus faecium C68]
 gi|293563725|ref|ZP_06678165.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1162]
 gi|293569376|ref|ZP_06680673.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1071]
 gi|294623473|ref|ZP_06702321.1| phosphoribosylamine--glycine ligase [Enterococcus faecium U0317]
 gi|314938747|ref|ZP_07846022.1| phosphoribosylamine--glycine ligase [Enterococcus faecium
           TX0133a04]
 gi|314941151|ref|ZP_07848048.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0133C]
 gi|314947898|ref|ZP_07851303.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0082]
 gi|314953049|ref|ZP_07856008.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0133A]
 gi|314993322|ref|ZP_07858693.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0133B]
 gi|314997615|ref|ZP_07862546.1| phosphoribosylamine--glycine ligase [Enterococcus faecium
           TX0133a01]
 gi|68195329|gb|EAN09779.1| Phosphoribosylglycinamide synthetase [Enterococcus faecium DO]
 gi|257812323|gb|EEV41081.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,230,933]
 gi|257816777|gb|EEV44105.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,502]
 gi|257826066|gb|EEV52692.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,410]
 gi|257828734|gb|EEV55341.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,408]
 gi|260074901|gb|EEW63217.1| phosphoribosylglycinamide synthetase [Enterococcus faecium C68]
 gi|291587902|gb|EFF19753.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1071]
 gi|291597067|gb|EFF28270.1| phosphoribosylamine--glycine ligase [Enterococcus faecium U0317]
 gi|291604303|gb|EFF33797.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1162]
 gi|313588332|gb|EFR67177.1| phosphoribosylamine--glycine ligase [Enterococcus faecium
           TX0133a01]
 gi|313592224|gb|EFR71069.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0133B]
 gi|313594851|gb|EFR73696.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0133A]
 gi|313600011|gb|EFR78854.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0133C]
 gi|313641960|gb|EFS06540.1| phosphoribosylamine--glycine ligase [Enterococcus faecium
           TX0133a04]
 gi|313645667|gb|EFS10247.1| phosphoribosylamine--glycine ligase [Enterococcus faecium TX0082]
          Length = 424

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 46/132 (34%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMDTYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G     + VE+      E  L L   R 
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GDSSKKIVVEEFL-AGEEFSL-LAFVRN 202

Query: 128 SGMVAFIASTQG 139
           + +   + S   
Sbjct: 203 TKVYPMVISQDH 214


>gi|290508233|ref|ZP_06547604.1| hypothetical protein HMPREF0485_00004 [Klebsiella sp. 1_1_55]
 gi|289777627|gb|EFD85624.1| hypothetical protein HMPREF0485_00004 [Klebsiella sp. 1_1_55]
          Length = 883

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 80/257 (31%), Gaps = 31/257 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + +  D   G 
Sbjct: 541 YLRTAAEVQQAADAMIDRVRLAWPQARIHGLLVQSMANRAG---AQELRVVVEHDPVFGP 597

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
           +  +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 598 LIMLG--EGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---FDDNALYRHLDIQEL 242
              L   +     D  ++  L+I+PL+   N     LD  +    FD ++  R      +
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGLAPFDGDSESR----LAI 707

Query: 243 RDVSEEDSREIEAKQHN 259
           R    +    +  K  +
Sbjct: 708 RPYPHQQEEWVVMKNGD 724


>gi|288934037|ref|YP_003438096.1| GCN5-related N-acetyltransferase [Klebsiella variicola At-22]
 gi|288888766|gb|ADC57084.1| GCN5-related N-acetyltransferase [Klebsiella variicola At-22]
          Length = 883

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 80/257 (31%), Gaps = 31/257 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + +  D   G 
Sbjct: 541 YLRTAAEVQQAADAMIDRVRLAWPQARIHGLLVQSMANRAG---AQELRVVVEHDPVFGP 597

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
           +  +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 598 LIMLG--EGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---FDDNALYRHLDIQEL 242
              L   +     D  ++  L+I+PL+   N     LD  +    FD ++  R      +
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGLAPFDGDSESR----LAI 707

Query: 243 RDVSEEDSREIEAKQHN 259
           R    +    +  K  +
Sbjct: 708 RPYPHQQEEWVVMKNGD 724


>gi|225858682|ref|YP_002740192.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           70585]
 gi|225720443|gb|ACO16297.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           70585]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|218547889|ref|YP_002381680.1| acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit
           [Escherichia fergusonii ATCC 35469]
 gi|218355430|emb|CAQ88038.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia fergusonii ATCC 35469]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLDI 694


>gi|206577349|ref|YP_002237074.1| CoA binding domain/acetyltransferase domain protein [Klebsiella
           pneumoniae 342]
 gi|206566407|gb|ACI08183.1| CoA binding domain/acetyltransferase domain protein [Klebsiella
           pneumoniae 342]
          Length = 883

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 80/257 (31%), Gaps = 31/257 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + +  D   G 
Sbjct: 541 YLRTAAEVQQAADAMIDRVRLAWPQARIHGLLVQSMANRAG---AQELRVVVEHDPVFGP 597

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
           +  +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 598 LIMLG--EGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---FDDNALYRHLDIQEL 242
              L   +     D  ++  L+I+PL+   N     LD  +    FD ++  R      +
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGLAPFDGDSESR----LAI 707

Query: 243 RDVSEEDSREIEAKQHN 259
           R    +    +  K  +
Sbjct: 708 RPYPHQQEEWVVMKNGD 724


>gi|15900768|ref|NP_345372.1| hypothetical protein SP_0885 [Streptococcus pneumoniae TIGR4]
 gi|111657956|ref|ZP_01408664.1| hypothetical protein SpneT_02000875 [Streptococcus pneumoniae
           TIGR4]
 gi|148988312|ref|ZP_01819759.1| hypothetical protein CGSSp6BS73_05780 [Streptococcus pneumoniae
           SP6-BS73]
 gi|168484772|ref|ZP_02709717.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|182683804|ref|YP_001835551.1| hypothetical protein SPCG_0834 [Streptococcus pneumoniae CGSP14]
 gi|303255275|ref|ZP_07341346.1| hypothetical protein CGSSpBS455_07336 [Streptococcus pneumoniae
           BS455]
 gi|303260410|ref|ZP_07346379.1| hypothetical protein CGSSp9vBS293_11652 [Streptococcus pneumoniae
           SP-BS293]
 gi|303262767|ref|ZP_07348705.1| hypothetical protein CGSSp14BS292_03713 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265056|ref|ZP_07350970.1| hypothetical protein CGSSpBS397_04516 [Streptococcus pneumoniae
           BS397]
 gi|303267634|ref|ZP_07353472.1| hypothetical protein CGSSpBS457_07251 [Streptococcus pneumoniae
           BS457]
 gi|303269988|ref|ZP_07355720.1| hypothetical protein CGSSpBS458_05524 [Streptococcus pneumoniae
           BS458]
 gi|14972359|gb|AAK75012.1| hypothetical protein SP_0885 [Streptococcus pneumoniae TIGR4]
 gi|147925993|gb|EDK77067.1| hypothetical protein CGSSp6BS73_05780 [Streptococcus pneumoniae
           SP6-BS73]
 gi|172042078|gb|EDT50124.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|182629138|gb|ACB90086.1| hypothetical protein SPCG_0834 [Streptococcus pneumoniae CGSP14]
 gi|301794016|emb|CBW36414.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|301801711|emb|CBW34417.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302597744|gb|EFL64819.1| hypothetical protein CGSSpBS455_07336 [Streptococcus pneumoniae
           BS455]
 gi|302636089|gb|EFL66586.1| hypothetical protein CGSSp14BS292_03713 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638445|gb|EFL68911.1| hypothetical protein CGSSpBS293_11652 [Streptococcus pneumoniae
           SP-BS293]
 gi|302640479|gb|EFL70894.1| hypothetical protein CGSSpBS458_05524 [Streptococcus pneumoniae
           BS458]
 gi|302642833|gb|EFL73142.1| hypothetical protein CGSSpBS457_07251 [Streptococcus pneumoniae
           BS457]
 gi|302645416|gb|EFL75649.1| hypothetical protein CGSSpBS397_04516 [Streptococcus pneumoniae
           BS397]
 gi|332201348|gb|EGJ15418.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA47368]
 gi|332202744|gb|EGJ16813.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           GA41317]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|15902833|ref|NP_358383.1| hypothetical protein spr0789 [Streptococcus pneumoniae R6]
 gi|116517060|ref|YP_816266.1| hypothetical protein SPD_0781 [Streptococcus pneumoniae D39]
 gi|15458386|gb|AAK99593.1| Hypothetical protein spr0789 [Streptococcus pneumoniae R6]
 gi|116077636|gb|ABJ55356.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|51892342|ref|YP_075033.1| carbamoyl-phosphate synthase large subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|81826164|sp|Q67Q54|CARB_SYMTH RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|51856031|dbj|BAD40189.1| carbamoyl-phosphate synthase large subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 1084

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 18/105 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL   ++P   G   +SV  A +  + +  P+ V  S +  G                 
Sbjct: 673 QLLSDLSIPRPPGGTATSVEEAVAVARRIGYPVLVRPSFVLGG---------------RA 717

Query: 70  VRVESSLKSVISDIREILG---STLITKQTGPTGSRVNCVYVEDG 111
           + +      + + +RE +       +       G  V    V DG
Sbjct: 718 MEIVHDEAELRAYMREAIAVSSDRPVLVDRYFLGKEVEVDCVSDG 762



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+++   PV +  ++++   A +  + +  PL V  +    G             + G
Sbjct: 133 RALMKEIGEPVPESAIVTTPEEALAFGEEVGYPLIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+      + +   +             G   S V    VE      +E+   ++ D   
Sbjct: 180 GI--AHDREEMRDIVTR-----------GLKLSPVTQCLVERSLLGWKEIEYEVMRDGAG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +  I S +   +I+ V       I   ++ P   +T  +          + D L ++G
Sbjct: 227 NAIT-ICSME---NIDPVGVHTGDSI---VVAPSQTLTDREHQILRSAALKIIDALGIEG 279

Query: 182 QARIDGG 188
              +   
Sbjct: 280 GCNVQFA 286


>gi|271965644|ref|YP_003339840.1| acetyl-CoA carboxylase, biotin carboxylase [Streptosporangium
           roseum DSM 43021]
 gi|270508819|gb|ACZ87097.1| acetyl-CoA carboxylase, biotin carboxylase [Streptosporangium
           roseum DSM 43021]
          Length = 450

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           QA+ + +   +PV  G    ++++  A++    +  P+ ++K+    GGRG
Sbjct: 118 QAREIAQAAGLPVLPGSSRSLATLEQAKAVAGEIGYPV-IIKATAGGGGRG 167


>gi|322388135|ref|ZP_08061739.1| carbamoylphosphate synthase large subunit [Streptococcus infantis
           ATCC 700779]
 gi|321140807|gb|EFX36308.1| carbamoylphosphate synthase large subunit [Streptococcus infantis
           ATCC 700779]
          Length = 387

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A+K +  P+ + K     G      FK    D   
Sbjct: 117 KKLFKKAGVPVVPGAVIETEADVDKAVKEIGLPM-IAKPDNGVG--AAATFKLETEDDVN 173

Query: 69  GVRVESS 75
             + E  
Sbjct: 174 HFKAEWD 180


>gi|300784658|ref|YP_003764949.1| carbamoyl-phosphate synthase large subunit [Amycolatopsis
           mediterranei U32]
 gi|299794172|gb|ADJ44547.1| carbamoyl-phosphate synthase large subunit [Amycolatopsis
           mediterranei U32]
          Length = 1104

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 48/161 (29%), Gaps = 33/161 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++R     V +  V   +      +K L  P+ +         R       L +    
Sbjct: 133 KDIVRTIGAEVPRSRVCHDMDEVRDTVKDLGLPVVI---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +                TG   S V  V +E+     +E  L L+ D+  
Sbjct: 181 ---MAHTPEDLERLAS-----------TGLAESPVTEVLIEESVLGWKEYELELMRDKHD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
            +V           IE +          + + P + +T  +
Sbjct: 227 NVVVV-------CSIENIDAMGVHTGDSVTVAPTMTLTDRE 260



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  +    +S   A+     +  P+ V  S +  GGRG
Sbjct: 686 EVLTDAGLPAPRYGTATSFEGAKRIADEIGYPVLVRPSYVL-GGRG 730


>gi|213613106|ref|ZP_03370932.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 602

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 87/271 (32%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 197 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 245

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 246 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 302

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 303 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 354

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 355 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 413

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 414 DGDNESR----LAVRPYPHQLEEWVEMKNGD 440


>gi|3236251|gb|AAC23639.1| putative phosphoribosylaminoimidazole carboxylase [Arabidopsis
           thaliana]
          Length = 645

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 31/155 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             ++ +P+ + + IS +  A  A +    PL +   ++   GRG                
Sbjct: 197 FSQHGIPLPEFMEISDIEGARKAGELFGYPLMIKSKRLAYDGRGNA-------------- 242

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V ++   + S +  +             G     +Y+E  A  ++EL + +   R   MV
Sbjct: 243 VANNQDELSSAVTAL-------------GGFSRGLYIEKWAPFVKELAVIVARGRDGSMV 289

Query: 132 AF----IASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
            +             I +   D P KI KL  D  
Sbjct: 290 CYPVVETIHRDNICHIVKAPADVPWKINKLATDVA 324


>gi|303242221|ref|ZP_07328709.1| carbamoyl-phosphate synthase, large subunit [Acetivibrio
           cellulolyticus CD2]
 gi|302590209|gb|EFL59969.1| carbamoyl-phosphate synthase, large subunit [Acetivibrio
           cellulolyticus CD2]
          Length = 1074

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 48/151 (31%), Gaps = 7/151 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +++  + + +     +V  A+   K L  P+ +  +    G  G   +     +   
Sbjct: 133 KETMKRLGIEMPQSEPAYTVEEAKEIAKKLGFPVVIRPAYTMGGTGGGLVYNMEELEVVA 192

Query: 69  GVRVESSLKSVISDIREILG--STLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           G  + +S+   I     +LG     +          +   ++E+   +          D 
Sbjct: 193 GRGISASMVGQILVEESVLGWEELELEVVRDSKNQMITVCFIENIDPMGVH-----TGDS 247

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
                    ST+    +++ A    + I  +
Sbjct: 248 FCSAPMLTISTELQQRLQKYAYSIVEAIEVI 278


>gi|296232100|ref|XP_002761445.1| PREDICTED: trifunctional purine biosynthetic protein adenosine-3
           [Callithrix jacchus]
          Length = 1010

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+         A S I     P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFRKPEEACSFIMNADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  + +     ++EI                +  + V +   
Sbjct: 157 -GVIVAKTKEEACKAVQEI--MQEKAFGVAGETIVIEELLVGEEVS 199


>gi|206891146|ref|YP_002247894.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206743084|gb|ACI22141.1| acetyl-CoA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 898

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 11/110 (10%)

Query: 287 KLYGGAPA----NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI---FGGIMRCDVLV 339
           +L G  PA    N LD+   A  +    A KII  D +V G LI      G   +     
Sbjct: 338 ELEGIVPARIIRNPLDLVSDAKPEDYENALKIIIKDKNVDGALIMFTPSLG--TQPVETA 395

Query: 340 KGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           + ++  VKE      L   +  A V+    L+   G+   T +  + A +
Sbjct: 396 QRVIKIVKENPYKPVLTNWMGAALVNEARELLNSHGIP--TFVTPEQAVR 443



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 26/232 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  +L  Y +PV      +++   +SAI  +  P+ V+K             K +   
Sbjct: 494 FEASEILSAYGIPVILTKRANTLEELKSAITEIGYPI-VLKID---------TPKIIHKF 543

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            KGGV +      +  ++  I G   + K     G     V V+    I     ++L   
Sbjct: 544 KKGGVIL-----DIRDELEAIEGFKWLKKLANEHGDAEASVIVQPMV-ITYGYEIALGAK 597

Query: 126 R-TSGMVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSE--DVASLCDMLELQ 180
           +  +     +  T G +   +E+ +   P     L       +  E      L      +
Sbjct: 598 KDPTFGAVILFGTGGNLLEALEDYSVGLPPLNQTL----AKRLMEETKIYRYLKKYPYYE 653

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                    +    Y       +   +INP+ I  +  +  LD  I  D  A
Sbjct: 654 DVLLKLEETVVKFSYLISDFPQIKEFDINPIFIT-DSEIFALDCSIILDKTA 704


>gi|116328910|ref|YP_798630.1| carbamoyl phosphate synthase large subunit [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116121654|gb|ABJ79697.1| Carbamoyl-phosphate synthase (glutamine- hydrolyzing), large
           subunit [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 1106

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 31/134 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      V V    + +++  A    K L  PL V  +    G            
Sbjct: 129 RELFKKAMEKIGVRVPASGLANNLTDAAEIKKKLGLPLIVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G    E + + V+S               G   S ++ V +E+     +E  L ++ 
Sbjct: 177 TGGGIAYTEETFEEVVS--------------KGLKASPISQVLLEESVLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           D  +  V  I S +
Sbjct: 223 D-LADNVVIICSIE 235


>gi|52425351|ref|YP_088488.1| phosphoribosylamine--glycine ligase [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307403|gb|AAU37903.1| PurD protein [Mannheimia succiniciproducens MBEL55E]
          Length = 429

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLAEAEAAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|293552848|ref|ZP_06673506.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1039]
 gi|291602982|gb|EFF33176.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1039]
          Length = 424

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMDTYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G     + VE+         L+ + D  
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GDSSKKIVVEEFLAGEEFSLLAFVRDTK 204

Query: 128 SGMVAF 133
              +  
Sbjct: 205 VYPMVI 210


>gi|291515967|emb|CBK65177.1| carbamoyl-phosphate synthase large subunit [Alistipes shahii WAL
           8301]
          Length = 1060

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L      PV    +  S+  A +  + +  P+                 +        
Sbjct: 133 KELCESLGEPVLPSHIAMSIEEAVAVAEEIGYPVV---------------LRPAFTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G         +   +R  L  +            V+ V VE      +E+   ++ DR  
Sbjct: 178 GGGFADDETELREMMRNALSLS-----------PVHQVLVEKSIKGYKEIEYEVMRDRND 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 TAICI 231


>gi|213691634|ref|YP_002322220.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|254813560|sp|B7GPW2|CARB_BIFLI RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|213523095|gb|ACJ51842.1| carbamoyl-phosphate synthase, large subunit [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320457721|dbj|BAJ68342.1| carbamoyl phosphate synthase large subunit [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 1127

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 31/203 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L+K  +   +     S+  A  A   +  P+ V  S +  GGRG     E+  D K  
Sbjct: 682 EVLKKAEMNAPRYGTALSLEEAMDAAHRIGYPVLVRPSYVL-GGRGM----EIVYDDKQL 736

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
            +        +++ +           T  +G   + + ++       E+ +  L D    
Sbjct: 737 TKYV---DRALAEAKA---------DTVVSGRLPSPLLIDKFLQDAIEIDVDALFDGEEL 784

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            +       GG+   +EE           L   P   ++ + +  L +       A+   
Sbjct: 785 YI-------GGIMEHVEEAGVHSGDAACTL---PPSTLSDDQIRRLRE--GTYAIAKGCH 832

Query: 188 GDLFPNLYKAFCDKDMSLLEINP 210
                N+  AF    + ++E NP
Sbjct: 833 VQGLINVQYAFMANTLYVIEANP 855



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         A+  +  S+   +   +    PL V         R       L +
Sbjct: 129 RELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  + V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNEEELHRIAGA-----------GIHYSPTDEVLIEEGIEGWKEFELELMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       +      +D   V       I    + P   +T  +   L D+
Sbjct: 223 DRNDN--VVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKLRDI 267


>gi|117928505|ref|YP_873056.1| carbamoyl-phosphate synthase large subunit [Acidothermus
           cellulolyticus 11B]
 gi|117648968|gb|ABK53070.1| carbamoyl-phosphate synthase large subunit [Acidothermus
           cellulolyticus 11B]
          Length = 1093

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+  +P  +    +S   A      +  P+ V  S +  G   +  +     +    
Sbjct: 677 EVLRRAGLPAPRYGTATSYAEARRIADEIGYPVLVRPSYVLGGRGMEIVYDAGMLEEYMA 736

Query: 70  VRVESSLK 77
              E+S +
Sbjct: 737 RATEASPE 744


>gi|148655213|ref|YP_001275418.1| lysine biosynthesis enzyme LysX [Roseiflexus sp. RS-1]
 gi|148567323|gb|ABQ89468.1| L-2-aminoadipate N-acetyltransferase [Roseiflexus sp. RS-1]
          Length = 282

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +  VP  +  +  +  +A  AI+ L  P+ V+K  I + GR   +  +            
Sbjct: 96  RAGVPTPRTRMAFTPESALRAIEDLGYPV-VLKPAIGSWGRLIAKVND------------ 142

Query: 74  SSLKSVISDIREILGS 89
                 + + ++ILGS
Sbjct: 143 REAAEALLEHKQILGS 158


>gi|157143830|emb|CAL47328.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVK 347
           +G ++ I G I     + K   GI+ A +
Sbjct: 61  RGKVMIIGGAIANFTDIAKTFTGIIQAFE 89


>gi|163859039|ref|YP_001633337.1| acetyl-CoA synthetase [Bordetella petrii DSM 12804]
 gi|163262767|emb|CAP45070.1| acetyl-CoA synthetase [Bordetella petrii]
          Length = 701

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 15/132 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E QAKAL  ++ V   + +++ +   A  A + L  P  V+K             K 
Sbjct: 479 SLDEAQAKALFARFGVQGVREIIVRNEAEAIEAARKLG-PRVVLK---------LLSGKI 528

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV V  + + +   +R++            TGS  +   V++      E+ + 
Sbjct: 529 THKSDVGGVAVNIAAQDIAQRLRQM-----AQDVRRHTGSEPDAYLVQEMISGAAEVIVG 583

Query: 122 LLVDRTSGMVAF 133
           L  D     +  
Sbjct: 584 LHKDPLGTAILL 595


>gi|157150233|ref|YP_001450393.1| carbamoyl phosphate synthase large subunit [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|189081836|sp|A8AX83|CARB_STRGC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|157075027|gb|ABV09710.1| carbamoyl-phosphate synthase, large subunit [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 1059

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAIEAARKIGFPVLVRPSYVLGG 714



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ +   P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIV 168


>gi|310780363|ref|YP_003968695.1| carbamoyl-phosphate synthase large subunit [Ilyobacter polytropus
           DSM 2926]
 gi|309749686|gb|ADO84347.1| carbamoyl-phosphate synthase large subunit [Ilyobacter polytropus
           DSM 2926]
          Length = 1061

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 63/195 (32%), Gaps = 37/195 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +   +G    ++  + +A + +  P+ V  S +  GGR               V  + S
Sbjct: 676 GIESPEGYAAKNLEESYAAAEKIGYPVVVRPSYV-IGGRAMRV-----------VHNKES 723

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L   ++   ++   T I       G+ +    + DG DIL                  + 
Sbjct: 724 LTEYMTHAIDMSKETTILIDKYVYGTEIEVDAICDGEDILI--------------PGIM- 768

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
                  IE+        I      P I ++ E +A L +            G    N+ 
Sbjct: 769 -----EHIEKTGVHSGDSITSY---PTISLSDEVIAELVESTRKIAVNIKTLG--IINIQ 818

Query: 196 KAFCDKDMSLLEINP 210
             F  K + ++E+NP
Sbjct: 819 YVFDGKKLYIIEVNP 833


>gi|257469772|ref|ZP_05633864.1| Phosphoribosylamine-glycine ligase [Fusobacterium ulcerans ATCC
           49185]
 gi|317064003|ref|ZP_07928488.1| phosphoribosylamine-glycine ligase [Fusobacterium ulcerans ATCC
           49185]
 gi|313689679|gb|EFS26514.1| phosphoribosylamine-glycine ligase [Fusobacterium ulcerans ATCC
           49185]
          Length = 417

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  A   V +    A+  IKT   P  VVK+   A G+             
Sbjct: 106 AKDFMKKYGVKTAAYEVFTCPEKAKEYIKTCEFP-LVVKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L+  +  + EI    ++ K     G     + VE+  D +     S+L    
Sbjct: 152 -GVLICQNLEEALKAVDEI----MVDKVFSSAG---EQIVVEEFLDGVE---ASILSVTD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SKVILPFISAKDHKKIGE 218


>gi|212224150|ref|YP_002307386.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus
           onnurineus NA1]
 gi|212009107|gb|ACJ16489.1| acyl-CoA synthetase (NDP forming), large subunit [Thermococcus
           onnurineus NA1]
          Length = 472

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 35/193 (18%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F    + R  D + + D+++  +   +              IG + +G G  +   D + 
Sbjct: 282 FKQTGVIRAEDFEHMFDLAKAFAALKDKLPKG-------NRIGIITDGGGAGVMASDAVA 334

Query: 288 LYGGA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
            +G                         N  DV G  D ++   A +   +D +V  IL+
Sbjct: 335 KFGLKMAELSEETLKFLKENFPPHAVAGNPTDVVGDTDAERYRIAIEGFVNDPNVDAILV 394

Query: 327 NIFGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAIDLD 385
            +   +   +      + A  + K + P+V + + G   D   R++ E G+ V       
Sbjct: 395 IVLFQVPLLEEEKIIDILAEYQKKSDKPIVAVAMGGKKTDYYARILEEKGVPVYPTP--- 451

Query: 386 DAAQKIVHAVKGV 398
              ++ V A+ G+
Sbjct: 452 ---ERGVRALAGL 461


>gi|154507986|ref|ZP_02043628.1| hypothetical protein ACTODO_00472 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797620|gb|EDN80040.1| hypothetical protein ACTODO_00472 [Actinomyces odontolyticus ATCC
           17982]
          Length = 444

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A+    +++   E+A   L  P YVVK    A G+G        A + 
Sbjct: 109 AKQVMTDAGVATARAFTCTTMDEVEAAFDDLGAP-YVVKDDALAAGKG-VVVTTDRAQAS 166

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
              R   S       I + L    ++      G+ V  V ++   D  R
Sbjct: 167 EHARACLSRDGGAVVIEDYLDGPEVSLFCFADGATV--VPLQPAQDFKR 213


>gi|123440691|ref|YP_001004683.1| phosphoribosylamine--glycine ligase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087652|emb|CAL10434.1| phosphoribosylamine--glycine ligase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 431

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|116073803|ref|ZP_01471065.1| acetyl-CoA carboxylase [Synechococcus sp. RS9916]
 gi|116069108|gb|EAU74860.1| acetyl-CoA carboxylase [Synechococcus sp. RS9916]
          Length = 447

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 97/278 (34%), Gaps = 37/278 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+ +++  VP   G   ++S+   A +  + +  P+ ++K+    GGRG          
Sbjct: 120 AKSTMQRVGVPTVPGSEGLLSTPDDAAALAEEMGYPV-MIKATAGGGGRGMRLV------ 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G  ++ +  K+   +     G+                +Y+E   D  R + + +L D
Sbjct: 173 -PGPDQLHTLFKAAQGEAEAAFGNP--------------GLYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +DP L     E   +    ++ +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEEAPSPALDPELRRRMGEAAVAAARSIQYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D     Y  F + +  +   +P+  M  G  L     +I+  +        IQ L
Sbjct: 275 VEFLLDRSGGFY--FMEMNTRIQVEHPVTEMVTGIDLIAEQLRIAGGEPISVSQDQIQ-L 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGL 278
           R  + E     E   HN       G I       G G+
Sbjct: 332 RGHAIECRINAEDAAHNFR--PAPGKITGWLPPGGPGI 367


>gi|323703214|ref|ZP_08114867.1| phosphoribosylamine/glycine ligase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531873|gb|EGB21759.1| phosphoribosylamine/glycine ligase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 425

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++ KYN+P A+  + +    A+  IK    P  VVK+   A G+G
Sbjct: 106 AKEIMAKYNIPTARYGIFADAAQAKEYIKQYGAPC-VVKADGLAAGKG 152


>gi|291460454|ref|ZP_06599844.1| phosphoribosylamine--glycine ligase [Oribacterium sp. oral taxon
           078 str. F0262]
 gi|291417021|gb|EFE90740.1| phosphoribosylamine--glycine ligase [Oribacterium sp. oral taxon
           078 str. F0262]
          Length = 425

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 25/130 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++ +P A   V S +  AE  I+    P+ V+K+   A G+             
Sbjct: 106 AKEFMKRHGIPSADYRVFSELSEAEKYIEDCELPI-VIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +     +  I+G           G   + V VE+  +      +S+L    
Sbjct: 152 -GVIIAKSREEARIGLWSIMGEKKF-------GHSGDRVVVEEYLEGPE---VSVLSFTD 200

Query: 128 SGMVAFIAST 137
              +  + S+
Sbjct: 201 GERIVPMLSS 210


>gi|303283754|ref|XP_003061168.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457519|gb|EEH54818.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 494

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+KY++P AK    +    A++ IK+   P+ VVK+   A G+              
Sbjct: 171 KDLLKKYDIPTAKYERFTDPEKAKAYIKSEGAPI-VVKTDGLAAGK-------------- 215

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V   L + ++ + ++    ++    G  G   + + VE+        + +++
Sbjct: 216 GVIVAMDLDTALAAVDDM----MLNAAFGAAG---DEIVVEEFLTGEEASFFAVV 263


>gi|217967427|ref|YP_002352933.1| acetyl-CoA carboxylase, biotin carboxylase [Dictyoglomus turgidum
           DSM 6724]
 gi|217336526|gb|ACK42319.1| acetyl-CoA carboxylase, biotin carboxylase [Dictyoglomus turgidum
           DSM 6724]
          Length = 447

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK L+++  VP+  G   +I     A    K +  P+ +               K     
Sbjct: 119 AKKLMKEAGVPLLPGSEGLIEDEKQALKVAKEIGFPVLI---------------KATAGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  S + ++ +IR  L      K  G  G     VY+E   +  R + + +L D
Sbjct: 164 GGKGMRVSYSPEELVKNIR--LAKMEAEKNFGNPG-----VYIEKFIEEPRHVEIQILGD 216

Query: 126 RTSGMVAF 133
           +   +++ 
Sbjct: 217 QYGNIISL 224


>gi|169349445|ref|ZP_02866383.1| hypothetical protein CLOSPI_00163 [Clostridium spiroforme DSM 1552]
 gi|169293520|gb|EDS75653.1| hypothetical protein CLOSPI_00163 [Clostridium spiroforme DSM 1552]
          Length = 1072

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 59/187 (31%), Gaps = 38/187 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + +A+  V  +V  A +    L  P+ V  +    G                
Sbjct: 133 KKAMNELGIEMARSEVAETVEEALAIADKLGYPVVVRPAYTMGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + + +   L ++L           VN   +E+      EL + ++ D  +
Sbjct: 178 GGGLVYNVEELKTIVSRGLQASL-----------VNQCLIEESILGWEELEVEVVRDANN 226

Query: 129 GMV--AFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTS---EDVASLCDMLELQGQ 182
            M+   FI       +I+ +             +     V     +    + + + + G 
Sbjct: 227 NMITVCFI------ENIDPLGVHTGDSFCSAPMLTISQEVQDRLKDQAFRIVESIGVIGG 280

Query: 183 ARIDGGD 189
             +    
Sbjct: 281 TNVQFAH 287


>gi|218781319|ref|YP_002432637.1| carbamoyl-phosphate synthase, large subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762703|gb|ACL05169.1| Carbamoyl phosphate synthetase, large subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1075

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 37/165 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R       + V +  ++ ++  A  A K +  P+ +  S    G            
Sbjct: 129 RELFRTAMENIGLSVPQSEIVHTLEEARKAAKDIGFPIIIRPSYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    +++ +   ++  L ++L           ++ V +E      +E  L ++ 
Sbjct: 177 -TGGGI--AYNVEDLDVFVKSGLDASL-----------IHQVMLEQSVLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
           D+ +  V  I S      IE +          + + P   +T + 
Sbjct: 223 DK-ADNVVIICS------IENMDPMGVHTGDSITVAPAQTLTDKQ 260


>gi|157143808|emb|CAL47317.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 101

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 16/95 (16%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP-------ANFLDVGGGADQDKVAAA----FKIITSD 318
             MV G G ++   D I  Y GA        AN+ +  GG    +        F ++T  
Sbjct: 1   WTMVAGGGASVVYADTIADYAGATGGNISDLANYGEYSGGPTTGETKFYAQTLFDLMTRH 60

Query: 319 SSVKGI--LINIFGGIMRCDVLVK---GILSAVKE 348
              +G   ++ I G I     + K   GI+ A++E
Sbjct: 61  KDPEGRDKILIIGGAIANFTDVAKTFTGIIQALEE 95


>gi|170019133|ref|YP_001724087.1| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739]
 gi|169754061|gb|ACA76760.1| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-------VTSEDVA 171
            + ++          +   +GG++        P+    + + PL         +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNTNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|117618048|ref|YP_854682.1| acyl-CoA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117559455|gb|ABK36403.1| acyl-CoA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 858

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 18/168 (10%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLY 289
           +A  R   +  +RD + E    +E   H+L+   L G  +  + NG GLA   +D +   
Sbjct: 251 DAAIRRAGMLRVRD-THELFAAVETLSHSLT---LKGERLAIISNGRGLANMAIDKLLER 306

Query: 290 GGAPAN-FLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGG--IMRCDVLVKGILSAV 346
           GG  A    D+G  AD +    A   +        IL+ I       R   L + ++  V
Sbjct: 307 GGKLAMPPRDIGSDADINDYQQALDDLLQGDEADAILL-IHAPSLTARGAALARSLIDYV 365

Query: 347 KEVKINIPLVMRLEGAN------VDIGNRLIAESGLNVITAIDLDDAA 388
           K+        +     N         G RL +E+G       +   AA
Sbjct: 366 KQHPRARRFNIL---TNWAGEYSAQEGRRLFSEAGFPTYRTPESAVAA 410


>gi|108799334|ref|YP_639531.1| carbamoyl phosphate synthase large subunit [Mycobacterium sp. MCS]
 gi|119868450|ref|YP_938402.1| carbamoyl phosphate synthase large subunit [Mycobacterium sp. KMS]
 gi|126434992|ref|YP_001070683.1| carbamoyl phosphate synthase large subunit [Mycobacterium sp. JLS]
 gi|123178842|sp|Q1B9F9|CARB_MYCSS RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|167006446|sp|A3PZ65|CARB_MYCSJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|167006447|sp|A1UFK4|CARB_MYCSK RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|108769753|gb|ABG08475.1| carbamoyl-phosphate synthase large subunit [Mycobacterium sp. MCS]
 gi|119694539|gb|ABL91612.1| carbamoyl-phosphate synthase large subunit [Mycobacterium sp. KMS]
 gi|126234792|gb|ABN98192.1| carbamoyl-phosphate synthase large subunit [Mycobacterium sp. JLS]
          Length = 1112

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LR   +P  +  + ++   A      +  P+ V  S +  GGRG
Sbjct: 694 EVLRTAGLPAPRFGLATTFDQARRIAADIGYPVLVRPSYVL-GGRG 738



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     AK  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVTKVGGESAKSRVCFTMEEVRETVGELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S + V      + G  L +  +         V +E+     +E  L L+ DR  
Sbjct: 186 ---MAYSAEDV----ERMAGHGLASSPSAN-------VLIEESIFGWKEYELELMRDRHD 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE            + + P + +T  +  ++ D
Sbjct: 232 NVVVV-------CSIENFDPMGVHTGDSVTVAPAMTLTDREYQTMRD 271


>gi|78188915|ref|YP_379253.1| D-alanine-D-alanine ligase and related ATP-grasp enzyme-like
           [Chlorobium chlorochromatii CaD3]
 gi|78171114|gb|ABB28210.1| D-alanine-D-alanine ligase and related ATP-grasp enzymes-like
           protein [Chlorobium chlorochromatii CaD3]
          Length = 647

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 50/119 (42%), Gaps = 12/119 (10%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL+   +PV +G  +SS+  A    K L  P+ +  +      +G G + +L    +  
Sbjct: 232 ALLKIGGLPVPEGRRVSSLEDALLYAKQLGYPVVIKPAD---LDQGAGVYADLRNSDE-- 286

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 ++   +  R++  + ++ + +     R+  V+  +   ++  L   +L D  S
Sbjct: 287 ------VREAFAHARKLSPTIMLERHSVGKVFRI-TVFRGEAVAVVERLPAGVLGDGVS 338


>gi|254819510|ref|ZP_05224511.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium intracellulare ATCC 13950]
          Length = 401

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 35/103 (33%), Gaps = 27/103 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VPV +   I SV   +   + + GP+ VVK+ I  G  G+            GVR+   
Sbjct: 110 GVPVPRYAEIRSVDELDEFARGIAGPV-VVKA-IRGGYDGR------------GVRMARD 155

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                      L            G  V     E+  ++ REL
Sbjct: 156 PVHAREIAAAFL----------ADGVPV---MAEEQVNLRREL 185


>gi|167764426|ref|ZP_02436547.1| hypothetical protein BACSTE_02810 [Bacteroides stercoris ATCC
           43183]
 gi|167697095|gb|EDS13674.1| hypothetical protein BACSTE_02810 [Bacteroides stercoris ATCC
           43183]
          Length = 388

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  A+     S+   ++A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTARYFYAKSLDELKAAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|289551015|ref|YP_003471919.1| Carbamoyl-phosphate synthase large chain [Staphylococcus
           lugdunensis HKU09-01]
 gi|289180547|gb|ADC87792.1| Carbamoyl-phosphate synthase large chain [Staphylococcus
           lugdunensis HKU09-01]
          Length = 1057

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLR  +VP  KG   +S   A +  + +  P+ V  S +  G
Sbjct: 669 EFEA--LLRDIHVPQPKGKTATSPQEALNNAREIGYPVVVRPSYVLGG 714


>gi|237710889|ref|ZP_04541370.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           9_1_42FAA]
 gi|237727199|ref|ZP_04557680.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D4]
 gi|229434055|gb|EEO44132.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides dorei
           5_1_36/D4]
 gi|229454733|gb|EEO60454.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           9_1_42FAA]
          Length = 389

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 33/154 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A K +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKSLEELKEAAKEIGFPC-VVKPLMSSSGKGQSL--------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 158 --VKSADELEQAWHY-----------GCEGSRGD-IKELIIEEFIQFDSE--ITLLTVTQ 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
                      G +   +   DY +      IDP
Sbjct: 202 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDP 232


>gi|218133233|ref|ZP_03462037.1| hypothetical protein BACPEC_01098 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992106|gb|EEC58110.1| hypothetical protein BACPEC_01098 [Bacteroides pectinophilus ATCC
           43243]
          Length = 1066

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P AKG  + +V  A  A   L  P+ V  S +  G                G
Sbjct: 673 EILEKTQIPRAKGHTVYTVDEALKAANELGYPVLVRPSYVLGG---------------QG 717

Query: 70  VRVESSLKSVISD---IREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  S   VI     I  I     I       G  +    V DG DI
Sbjct: 718 MQIAVSDTDVIEFMNIINRIKQDHPILVDKYLMGKEIEVDAVCDGDDI 765


>gi|153954719|ref|YP_001395484.1| hypothetical protein CKL_2101 [Clostridium kluyveri DSM 555]
 gi|219855183|ref|YP_002472305.1| hypothetical protein CKR_1840 [Clostridium kluyveri NBRC 12016]
 gi|146347577|gb|EDK34113.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568907|dbj|BAH06891.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 401

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 16/119 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+K  + V     I+S++  +  I     P+ V+K   ++G RG  R  E       
Sbjct: 108 KEVLKKAGINVPPFRKINSLNDLKKFINEYAYPV-VIKPVDNSGARGVLRLTE------- 159

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            V +  +L    S+ R    S  +  +    G++++     +G     E Y++   DR 
Sbjct: 160 AVDLTWALNESKSNSR----SGDVMVEKFLEGNQIST----EGIMYEDEFYITGFADRN 210


>gi|134096475|ref|YP_001101550.1| cyanophycin synthetase [Herminiimonas arsenicoxydans]
 gi|133740378|emb|CAL63429.1| putative Cyanophycin synthetase [Herminiimonas arsenicoxydans]
          Length = 856

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +++   A  A   +   + V+K +   G +GKG    L    + 
Sbjct: 211 KLLLSAAGVPVPDGRSVTTADDAWLAATEIGAAV-VIKPR--DGNQGKGVSVNLKTREEI 267

Query: 69  GVRVE 73
            V   
Sbjct: 268 EVGFA 272


>gi|330827051|ref|YP_004390354.1| CoA-binding domain-containing protein [Alicycliphilus denitrificans
           K601]
 gi|329312423|gb|AEB86838.1| CoA-binding domain protein [Alicycliphilus denitrificans K601]
          Length = 695

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 32/119 (26%), Gaps = 15/119 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +  LL ++ VP     +  +   A +A   +  P  V         + +     L
Sbjct: 480 LNEVDSLGLLARHGVPTVPMHLCRTADEARAAFDAIGAPAVVKACSAEVPHKSEHGLVAL 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                       + +                 +    G + + V V       RE  + 
Sbjct: 540 N---------VQTREQAAELFER------FWARMDAIGVQRDGVIVAATHKARREFMVG 583


>gi|323480934|gb|ADX80373.1| Phosphoribosylglycinamide synthetase [Enterococcus faecalis 62]
          Length = 415

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRTLVAMMENQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|315658510|ref|ZP_07911382.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           lugdunensis M23590]
 gi|315496839|gb|EFU85162.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           lugdunensis M23590]
          Length = 1057

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLR  +VP  KG   +S   A +  + +  P+ V  S +  G
Sbjct: 669 EFEA--LLRDIHVPQPKGKTATSPQEALNNAREIGYPVVVRPSYVLGG 714


>gi|119511412|ref|ZP_01630524.1| phosphoribosylaminoimidazole carboxylase [Nodularia spumigena
           CCY9414]
 gi|119463957|gb|EAW44882.1| phosphoribosylaminoimidazole carboxylase [Nodularia spumigena
           CCY9414]
          Length = 402

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 31/166 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+   +PV +   +       S I+ L  P+ V+KS+ H G  G+G F            
Sbjct: 108 LKDLGLPVPRFFAVEEPENLASQIEDLGFPV-VLKSRRH-GYDGQGTF------------ 153

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +   L  +   +     +   T +    G       +E+     RE  L+++  R+    
Sbjct: 154 IIKDLADLQQKL-----NLPNTNKAFSQGF----FLIEEFVTFERE--LAIIAVRSVEGE 202

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
                T   ++ ++  +   + I    I P     + ++ ++   L
Sbjct: 203 VV---TYPVVETQQEEQVCRRVIAPADITPN---QAAEIEAIAHTL 242


>gi|269795106|ref|YP_003314561.1| carbamoyl-phosphate synthase large subunit [Sanguibacter keddieii
           DSM 10542]
 gi|269097291|gb|ACZ21727.1| carbamoyl-phosphate synthase large subunit [Sanguibacter keddieii
           DSM 10542]
          Length = 1107

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 83/270 (30%), Gaps = 52/270 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P       +++  A      +  P+ V  S +  G                G
Sbjct: 685 RVLGEAGLPAPAFGTATTLAQACEIADGIGYPVLVRPSYVLGG---------------RG 729

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +  S + +   +   LG      +    G  +  + ++   D   E+ +  L D    
Sbjct: 730 MEIVYSEEQLTGYVERALG------EVAKAGGHLAPILIDRFLDDAMEIDVDALYDGEE- 782

Query: 130 MVAFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDMLELQG 181
              F+    G M+ IEE           L   P + ++  ++A        +   + ++G
Sbjct: 783 --MFLG---GVMEHIEEAGIHSGDSACVL---PPVSLSEAEIARIRRSTEAIAKGVGVRG 834

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQE 241
              +    +   LY    + +       P +    G      + +    +       I +
Sbjct: 835 LLNVQFALVSDVLY--VLEANPRASRTVPFVSKATGVPLAKAAALLMVGHT------IAD 886

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
           +R      +  +   + + + + LD  I  
Sbjct: 887 MR------ASGVLPAEGDGATLDLDAPIAV 910


>gi|257784417|ref|YP_003179634.1| carbamoyl-phosphate synthase, large subunit [Atopobium parvulum DSM
           20469]
 gi|257472924|gb|ACV51043.1| carbamoyl-phosphate synthase, large subunit [Atopobium parvulum DSM
           20469]
          Length = 1073

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           ALL + N+      V S++  A  A + +  PL V  S +  GGRG  
Sbjct: 678 ALLDRLNIACPPSAVASTMDEARDAARRIGYPLIVRPSYVL-GGRGMA 724



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 61/171 (35%), Gaps = 37/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +      + VA+  +  S+  A+  +  L  P+ +  S    G            
Sbjct: 129 RELFSEAVQDIGLEVARADIAHSMEDAQRIVADLGYPVVIRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  + + ++  + + L   L++ +        + V VE+  +  +E+ + ++ 
Sbjct: 177 ---AGGGIAHTPEELVEIVEQGL---LLSPE--------HEVLVEESIEGWKEIEMEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D T   +           IE +          + + P   +T +++ +L D
Sbjct: 223 DTTGNGIVV-------CSIENLDPMGVHTGDSITVAPAQTLTDKELQNLRD 266


>gi|182413493|ref|YP_001818559.1| acetyl-CoA carboxylase, biotin carboxylase [Opitutus terrae PB90-1]
 gi|177840707|gb|ACB74959.1| acetyl-CoA carboxylase, biotin carboxylase [Opitutus terrae PB90-1]
          Length = 454

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +RK  VP+  G    + S   A    + +  P+ ++K+    GGRG          
Sbjct: 119 AKETVRKAGVPIVPGSDGPVGSEADATKIARKIGYPV-IIKAVAGGGGRGM-------RI 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +   V       +  S+  +  G+                VYVE   +  R +   +L D
Sbjct: 171 AHNDVSFAKEYHTARSEAEKAFGNG--------------AVYVEKYIEKPRHIEFQILAD 216

Query: 126 RTSGMV 131
               ++
Sbjct: 217 SHGKVI 222


>gi|256820713|ref|YP_003141992.1| carbamoyl phosphate synthase large subunit [Capnocytophaga ochracea
           DSM 7271]
 gi|256582296|gb|ACU93431.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           ochracea DSM 7271]
          Length = 950

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLKENNIPYPRFGVAETADEALKLSDELDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + + + + ++L   
Sbjct: 735 KIVINKEELEAHVVDLLRKI 754


>gi|209885673|ref|YP_002289530.1| CoA-binding [Oligotropha carboxidovorans OM5]
 gi|209873869|gb|ACI93665.1| CoA-binding [Oligotropha carboxidovorans OM5]
          Length = 710

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 77/266 (28%), Gaps = 18/266 (6%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    +  S   A      +  P+ +         + +     +    
Sbjct: 27  EGKLVCDAYGIAVPGEGLAKSADEATKLAGKMGYPVVMKIVSPDILHKTEAGGVVVGVKD 86

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
               +                   L   +     +++  + V+       E+ +  + D 
Sbjct: 87  DAAAKAAYD-------------QILANAKKYKADAKIEGIQVQQMLAGGTEVIIGSITDD 133

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           + G    +A   GG+ +E +     +       D L  +       +   +       R 
Sbjct: 134 SFGK--LVAFGLGGVLVEVLKDITFRMAPATKEDALSMLDGIQAKEMLHGVRGGDPVNRD 191

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
              ++   + +   D  ++  L++NP+   K       D +I  D N   +     +   
Sbjct: 192 ALANIIVGVSQLVTDFPEIVELDLNPVFATK-KDAIAADVRIVVDFNYKPKEAPRPDAEI 250

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIG 270
           V   +   +      +   A DG IG
Sbjct: 251 VKAMNRIMMPKSVAVIGASAEDGKIG 276


>gi|326564188|gb|EGE14424.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis 12P80B1]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V + + AA+  ++    P+ V+K+   A G+             
Sbjct: 108 AKEFMQKYGIPTAYYQVFTEIEAAKRYVREKGTPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V     +    I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMDEATAFDAIDDMLD----GNKFGDAG---SRVVIEQFLSGEEASFICMI 201


>gi|323702041|ref|ZP_08113709.1| carbamoyl-phosphate synthase, large subunit [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532923|gb|EGB22794.1| carbamoyl-phosphate synthase, large subunit [Desulfotomaculum
           nigrificans DSM 574]
          Length = 1073

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 60/205 (29%), Gaps = 45/205 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P   G    SV  A    + +  P+ V  S +  G                 
Sbjct: 676 RLLTELGIPKPPGGTAFSVEQAAVIAEKIGFPVLVRPSYVLGG---------------RA 720

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +  S   +++ +           Q  P     + V V D     RE  +  + D  + 
Sbjct: 721 MEIVYSQAELLAYMER-------AVQVTPE----HPVLV-DRYLAGREFEVDAVCDGETV 768

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQARI 185
           ++  I        IE         I       L    ++ +      L   L ++G   I
Sbjct: 769 LIPGIM-----EHIERAGVHSGDSIAVYPAQTLTQAQTDQMVDYTQRLAQALGIKGLVNI 823

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINP 210
                         +  + ++E+NP
Sbjct: 824 QY---------VLHEGQVYVIEVNP 839


>gi|317969047|ref|ZP_07970437.1| phosphoribosylamine--glycine ligase [Synechococcus sp. CB0205]
          Length = 442

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 68/221 (30%), Gaps = 49/221 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  +P A     +S   A  A+     P  VVK+   A G+             
Sbjct: 127 AKALMVEAGIPTAGYWKANSREEALRALDAQGKP-LVVKADGLAAGK------------- 172

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S+    + I EI       +                          SL+++  
Sbjct: 173 -GVTVAESVDEARAAIEEIFAGRFGGE-------------------------ASLVLEER 206

Query: 128 SGMV--AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-ASLCDMLELQGQAR 184
           +     +  A + G   +        ++I +  + P  G       A L D   L+   R
Sbjct: 207 THGPEVSVFALSDGERMVLLPPAQDHKRIGEGDVGPNTGGMGAYAPAPLLDQAGLEEVKR 266

Query: 185 IDGGDLFPNL------YKAFCDKDMSLLEINPLIIMKNGRL 219
           +        L      Y+      + L E  P +I  N R 
Sbjct: 267 LVLDPTLAALQARGISYRGVIYAGLMLTETGPSVIEFNCRF 307


>gi|315612922|ref|ZP_07887833.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis ATCC 49296]
 gi|315315032|gb|EFU63073.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis ATCC 49296]
          Length = 1058

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G   +    E
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGGRAMEIVENE 723

Query: 62  LPADSKGGVRVESSLK 77
               S  G  V++S  
Sbjct: 724 KDLRSYMGTAVKASPD 739



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   ++  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAASIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|134046447|ref|YP_001097932.1| CoA-binding domain-containing protein [Methanococcus maripaludis
           C5]
 gi|132664072|gb|ABO35718.1| CoA-binding domain protein [Methanococcus maripaludis C5]
          Length = 702

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 55/149 (36%), Gaps = 34/149 (22%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQDKV 308
             + N  G  +   D ++ +G   A F                     LD+ G AD D+ 
Sbjct: 300 AVITNAGGFGVLAADSVENFGLELAEFSGTTVSELKKYLPDTSGISNPLDLIGDADVDRY 359

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI-------NIPLVMR-LE 360
             AF+++ +D +V G+L  +     +      G+   + ++K         IP+V   + 
Sbjct: 360 KHAFELVENDPNVDGLLAIL---TPQGMTDALGVARELVKLKNYMICKKDKIPIVASFVG 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G +V      + E G+      +L  A +
Sbjct: 417 GTSVLEARSYLQEKGIPSFICPEL--AVK 443


>gi|326561683|gb|EGE12020.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis
           103P14B1]
 gi|326571125|gb|EGE21149.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis BC7]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V + + AA+  ++    P+ V+K+   A G+             
Sbjct: 108 AKEFMQKYGIPTAYYQVFTEIEAAKRYVREKGTPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V     +    I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMDEATAFDAIDDMLD----GNKFGDAG---SRVVIEQFLSGEEASFICMI 201


>gi|326335080|ref|ZP_08201279.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga sp.
           oral taxon 338 str. F0234]
 gi|325692744|gb|EGD34684.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga sp.
           oral taxon 338 str. F0234]
          Length = 950

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLKENNIPYPRFGVAETADEALKLSDELDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + + + + ++L   
Sbjct: 735 KIVINKEELEAHVVDLLRKI 754


>gi|225850411|ref|YP_002730645.1| carbamoyl-phosphate synthase large chain, N- section
           (Carbamoyl-phosphate synthetase ammonia chain)
           [Persephonella marina EX-H1]
 gi|225645104|gb|ACO03290.1| carbamoyl-phosphate synthase large chain, N- section
           (Carbamoyl-phosphate synthetase ammonia chain)
           [Persephonella marina EX-H1]
          Length = 561

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + + K  V+ S+  AE  I  +  P+ +                       G
Sbjct: 133 KEAMEKIGLEMPKSAVVKSLAEAEEIIDWIGFPVII--------------RPSFTLGGTG 178

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +       ++  L ++            V+ V +E+     +E  + ++ D+  
Sbjct: 179 G-SIAYNRDEFYYKVKAGLDAS-----------PVHEVLLEESVLGWKEFEMEVMRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
                I S      IE +          + I P + +T ++   L D
Sbjct: 227 NC-VIICS------IENLDPMGIHTGDSITIAPAMTLTDKEYQMLRD 266


>gi|170727660|ref|YP_001761686.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Shewanella
           woodyi ATCC 51908]
 gi|169813007|gb|ACA87591.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Shewanella woodyi ATCC 51908]
          Length = 382

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 26/163 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL K  VP A   +I+       A+  L  PL +   Q    G+G+ R K        
Sbjct: 97  KDLLDKTGVPSAPYQLITEKQHLLDAVSQLDLPLVIKTCQAGYDGKGQWRLK-------- 148

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 SL  V +   E+ G      ++ P     + +  E      RE  +S++  R  
Sbjct: 149 ------SLDQVDAIWAEMAGFIASGTESFP-----HTIIAEKMIPFDRE--VSVIGARDK 195

Query: 129 GM-----VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
                           G+    +A +  +KI +  +D    ++
Sbjct: 196 EGNVKIYPVTENQHTNGVLTLSLAIEMDEKIQQQAVDAFNKLS 238


>gi|326575685|gb|EGE25608.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis CO72]
 gi|326577151|gb|EGE27045.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis O35E]
          Length = 423

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V + + AA+  ++    P+ V+K+   A G+             
Sbjct: 108 AKEFMQKYGIPTAYYQVFTEIEAAKRYVREKGTPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V     +    I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMDEATAFDAIDDMLD----GNKFGDAG---SRVVIEQFLSGEEASFICMI 201


>gi|313904758|ref|ZP_07838131.1| carbamoyl-phosphate synthase, large subunit [Eubacterium
           cellulosolvens 6]
 gi|313470361|gb|EFR65690.1| carbamoyl-phosphate synthase, large subunit [Eubacterium
           cellulosolvens 6]
          Length = 1077

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 53/185 (28%), Gaps = 34/185 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K ++ + +     SV  A      L  P+ V  +    G                
Sbjct: 133 KETMNKLHIDMPRSHEAYSVEEAVKYADKLGYPVVVRPAYTMGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  + + + +     L ++L           +N V +E+      EL L ++ D+ +
Sbjct: 178 GGGLVYNREELQTVASRGLQASL-----------INQVLIEESILGWEELELEVVRDKDN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTS---EDVASLCDMLELQGQAR 184
                       +D   V             +     + +   E    + + + + G   
Sbjct: 227 N--MITVCFIENVDP--VGVHTGDSFCVAPMLTISEELQAKLQEQAYRIVEHIGVIGGTN 282

Query: 185 IDGGD 189
           +    
Sbjct: 283 VQFAH 287


>gi|297849296|ref|XP_002892529.1| phosphoribosylamine--glycine ligase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338371|gb|EFH68788.1| phosphoribosylamine--glycine ligase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 530

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    S   AA+  I+    P+ V+K+   A G+              
Sbjct: 202 KNLCLKYNIPTAKYKTFSDASAAKEYIQEQGAPI-VIKADGLAAGK-------------- 246

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V   L+     +  +L    +    G  G     V VE+  +     + +L+
Sbjct: 247 GVTVAMELEEAFEAVDSML----VKGVFGSAGC---QVVVEEFLEGEEASFFALV 294


>gi|307152568|ref|YP_003887952.1| Cyanophycin synthase (L-aspartate-adding) [Cyanothece sp. PCC 7822]
 gi|306982796|gb|ADN14677.1| Cyanophycin synthase (L-aspartate-adding) [Cyanothece sp. PCC 7822]
          Length = 627

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 11/104 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK- 67
           K  L     PV +G V+ S   A ++   L  P+ V+K  I  G +G G    +  D + 
Sbjct: 206 KGFLANCGFPVPRGYVVYSFKEALTSADELGYPV-VIKPVI--GHKGIGVTANIHNDREL 262

Query: 68  -----GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
                  V      +  I   + I G+       G  G  V  V
Sbjct: 263 EFAYDRAVEASPRQREHIIVEKYIPGADFRLLCVG--GKFVAAV 304


>gi|134099003|ref|YP_001104664.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133911626|emb|CAM01739.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 892

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 51/246 (20%)

Query: 7   QAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Q + +L  + +P V   V    V    +A +++ G + VVK+ +      +         
Sbjct: 675 QVQRVLTAFGLPAVPTTVCADEV-ELLAAFRSMTGRV-VVKAWVPGLVHKER-------- 724

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + G V   +++  V S    + G           G  ++ V ++   +  RE  + +  D
Sbjct: 725 AGGVVLDVTTVGEVRSAWSRLHGRF---------GEALHGVLLQPMVEPGREFLVGVHSD 775

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------- 177
              G V       GG+D + VA    + +          +T  D A++   L        
Sbjct: 776 SVFGPVVVFG--LGGVDTDVVADRSHRLVP---------LTDRDAAAMLGELRSSAALFG 824

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                 L   A  D       + +   +  ++ +++NP+++   G     D++I      
Sbjct: 825 ERSVAALDTAALTDVSLRTARMAELLPE--VTEVDLNPVVVTGEGACIA-DARIRV---- 877

Query: 233 LYRHLD 238
             R  D
Sbjct: 878 RRREPD 883


>gi|317507830|ref|ZP_07965531.1| phosphoribosylamine-glycine ligase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253872|gb|EFV13241.1| phosphoribosylamine-glycine ligase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 417

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  V  A+  V+ S    ++A+     P++VVK    A G+             
Sbjct: 106 AKEVMAEAGVRTARSEVVDSTARLDAALDRFG-PIWVVKDDRLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V            E+L
Sbjct: 152 -GVVVTEDRAEAREHAVELL 170


>gi|218283816|ref|ZP_03489730.1| hypothetical protein EUBIFOR_02324 [Eubacterium biforme DSM 3989]
 gi|218215576|gb|EEC89114.1| hypothetical protein EUBIFOR_02324 [Eubacterium biforme DSM 3989]
          Length = 1067

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++A   L K N+P  +G    +V  +      +  P+ V  S +  GGR     + + 
Sbjct: 668 HEFEAM--LHKLNIPQPQGETAVTVEESLVIANKIGYPVLVRPSYVL-GGRAM---EIVH 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQ 95
            D +  V + +++K +  D   ++   ++ K+
Sbjct: 722 NDDELRVYMATAVKEISHDAPILVDKYIVGKE 753



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++L++  N PV +  ++ +V  A +  +TL  P+ V  +    G
Sbjct: 133 RSLMQDINEPVPESTIVHTVEEAVAFCETLGYPVVVRPAYTLGG 176


>gi|322704101|gb|EFY95700.1| bifunctional purine biosynthetic protein Ade1, putative
           [Metarhizium anisopliae ARSEF 23]
          Length = 429

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KAL+ KY++P AK    S    A + ++++     V+K    A G+             
Sbjct: 114 SKALMEKYDIPTAKYKTFSQYEDARAYLQSIDCSRVVLKVDGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + ++    +      L   ++  + G +G     V +E+  D
Sbjct: 161 -GVVLPANEAEALDA----LRLMMVESKFGFSGQ---SVVIEEFLD 198


>gi|300870733|ref|YP_003785604.1| phosphoribosylamine glycine ligase [Brachyspira pilosicoli 95/1000]
 gi|300688432|gb|ADK31103.1| phosphoribosylamine glycine ligase [Brachyspira pilosicoli 95/1000]
          Length = 417

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  A+    +  + A+  +K++  P+ V+K+   A G+             
Sbjct: 106 AKEFMKKYGIKTAEYKTFNDYNNAKEYLKSINYPI-VIKASGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +   +    + + +++   +        G   N + +E+  +      LS+ 
Sbjct: 152 -GVIICKDINEANNALEDMMIKKVF-------GDACNEIVIEEFLEGYEASILSIT 199


>gi|68068033|ref|XP_675930.1| acetyl CoA synthetase [Plasmodium berghei strain ANKA]
 gi|56495386|emb|CAH94920.1| acetyl CoA synthetase, putative [Plasmodium berghei]
          Length = 713

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 18/144 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++EY +K +L  Y++PV    +  ++   E+A   +  P  +         +        
Sbjct: 551 LNEYDSKRILETYDIPVVNTKIYKTLLDVENA-DNINYPCAM---------KIYSDTITH 600

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYL 120
             D  G +   +S + +I+  ++I     + K     G     V +++  DI    EL L
Sbjct: 601 KKDIGGVILNINSKEELINAYKKI--YENVQKHKQEKGF--QGVTIQNMIDINDGIELIL 656

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE 144
               D+  G V    S  GG  +E
Sbjct: 657 GYYYDKCFGPVLLFGS--GGSYVE 678


>gi|297530198|ref|YP_003671473.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Geobacillus sp. C56-T3]
 gi|297253450|gb|ADI26896.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Geobacillus sp. C56-T3]
          Length = 450

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 100/333 (30%), Gaps = 43/333 (12%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +A+  + K  VP+  GV   +     A  A  ++  P+ ++K+    GG           
Sbjct: 118 EARRTMEKAGVPIVPGVSFALDGSDEAAKAAASIGYPV-MLKASAGGGGI---------- 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+ +      +        GS          G     +Y+E   +  R + + LL 
Sbjct: 167 ----GMHIARDEAELRQAFE---GSQKRAASFFGDG----TMYIEKYIERPRHIEIQLLA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQA 183
           D+    V      +    I+   +   ++     +D        E        +      
Sbjct: 216 DQNGNCVYLW---ERECSIQRRHQKVVEEAPSPFLDEETRRKMGEAAVRAARYIGYANAG 272

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQE 241
            I+   D   N Y  F + +  L   +P+     G  +     +I+  +   Y+  +I  
Sbjct: 273 TIEFLVDEQKNFY--FLEMNTRLQVEHPVTEEITGIDIVEEQLRIAAGEPLRYKQEEI-- 328

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD--- 298
            R         I A+  N  Y +  G I       G      +     G     F D   
Sbjct: 329 -RRDGHAIEVRIYAEDPNTFYPS-PGRITVFSAPQG-EWIRHETAVQSGITVTPFYDPMI 385

Query: 299 ---VGGGADQDKVAAAFKIITSDSSVKGILINI 328
              +  G D+            D  V+GI  NI
Sbjct: 386 AKLIAKGPDRQTAIERLLEALRDYRVEGIKTNI 418


>gi|224123484|ref|XP_002319089.1| predicted protein [Populus trichocarpa]
 gi|222857465|gb|EEE95012.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 35/157 (22%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             ++ +P+   + I  +  A+ A      P  ++KS      R         A +K  V 
Sbjct: 158 FSQHGIPLPDFMQIDDLEGAKRAGDLFGYP-LMLKS------RRLAYDGRGNAVAKNEVE 210

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR----- 126
           +                    T      G     +YVE     ++E  L+++V R     
Sbjct: 211 L--------------------TSAVNALGGFARGLYVEKWTPFVKE--LAVIVGRGRDNS 248

Query: 127 TSGMVAF-IASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
            S          +    I +     P KI KL ID  
Sbjct: 249 ISCYPVVETIHKENICHIVKAPAHVPWKIRKLAIDVA 285


>gi|213964309|ref|ZP_03392535.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           sputigena Capno]
 gi|213953051|gb|EEB64407.1| carbamoyl-phosphate synthase, large subunit [Capnocytophaga
           sputigena Capno]
          Length = 950

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  V  +   A      L  PL V  S +  G                G+
Sbjct: 690 LLKENNIPYPRFGVAETADEALKLSDELDFPLLVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + + + + ++L   
Sbjct: 735 KIVINKEELEAHVVDLLRKI 754


>gi|167835996|ref|ZP_02462879.1| phosphoribosylamine--glycine ligase [Burkholderia thailandensis
           MSMB43]
          Length = 425

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYLDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMTLDEAHAAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|125536060|gb|EAY82548.1| hypothetical protein OsI_37769 [Oryza sativa Indica Group]
          Length = 557

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY++P AK    +    A+  ++    P+ VVK+   A G+              
Sbjct: 231 KKLCDKYHIPTAKYQSFTDPSDAKKYVEEQGAPI-VVKADGLAAGK-------------- 275

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I  +L    +    G  G   + V VE+  +   E+    LVD  +
Sbjct: 276 GVVVAMTLEKAFEAIDSML----VEGSFGSAG---SRVIVEEYLE-GEEVSFFALVDGET 327

Query: 129 GMVA 132
            +  
Sbjct: 328 ALPL 331


>gi|194758315|ref|XP_001961407.1| GF14946 [Drosophila ananassae]
 gi|190615104|gb|EDV30628.1| GF14946 [Drosophila ananassae]
          Length = 1358

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A++ I++      VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTEKAKAFIRSASYQALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V +++      + EILG
Sbjct: 160 -GVVVAANVDEACQAVDEILG 179


>gi|38234614|ref|NP_940381.1| putative phosphoribosylglycinamide formyltransferase
          [Corynebacterium diphtheriae NCTC 13129]
 gi|38200878|emb|CAE50583.1| Putative phosphoribosylglycinamide formyltransferase
          [Corynebacterium diphtheriae]
          Length = 298

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 10 ALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYV 44
          ALL+K      +PV +  V S+    E A   L  P  V
Sbjct: 57 ALLQKASRDLGLPVPRYAVASNPDELEVAAAQLGFPCVV 95


>gi|148257026|ref|YP_001241611.1| hypothetical protein BBta_5753 [Bradyrhizobium sp. BTAi1]
 gi|146409199|gb|ABQ37705.1| hypothetical protein BBta_5753 [Bradyrhizobium sp. BTAi1]
          Length = 897

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 33/193 (17%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +A +R   +  + D+ E       A+            +  + NG G+ +  +D +   G
Sbjct: 265 DAAFRRAGVLRVSDLRELFDC---AETLGRVESPTGKRLAILTNGGGIGVLAVDRLVELG 321

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NI 328
           G PA                     N +D+ G AD  +   + + + +D +   +L+ N+
Sbjct: 322 GVPATLSPAVRDRLQAVLPPTWSASNPVDIVGDADAARYTTSLEALLADQANDAVLVMNV 381

Query: 329 FGGIMRCDVLVKGI---LSAVKEVKINI--PLVMRLEGANVDIGNRLIAESGLNVITAID 383
              I     +   +   ++A ++       P++    GA        ++ +G+      D
Sbjct: 382 QTAIASASDIAIAVTEFVNAYRKQHRRWAKPVLAAWVGA-EQQVIETLSGAGIPNYPTED 440

Query: 384 LDDAAQKIVHAVK 396
             DA +  +H V+
Sbjct: 441 --DAVRGFMHLVR 451



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 45/237 (18%)

Query: 10  ALLRKYNVP-VAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPADS 66
            LL  Y++  V      S+V  A +    L   G   V+K           R     +D 
Sbjct: 499 RLLEAYDIAMVPT-YAASTVDEAVAYANQLFAQGATVVLKI--------LSRDIVHKSDV 549

Query: 67  KGGVRVESSLKSVISDIRE-ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G V   ++ ++V +   E +  +  +      +G  V  + V       REL + +  D
Sbjct: 550 GGVVLNLTTAEAVRNAAIEIMARAKAVRPDARISGVIVQAMVVRAK---ARELIMGIADD 606

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------------AS 172
            T G V      +GG  +E +             D  +G+   D+               
Sbjct: 607 PTFGTVIVFG--RGGTAVEIIN------------DKALGLPPLDLHLARNLIERTRVSRL 652

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           L    ++          +   L +   D  ++  L+INPL+  ++G +  +D++++ 
Sbjct: 653 LRAYRDVPAVKPDAVALVLVKLAQLAADVPEIRELDINPLLADESG-VLAVDARVAV 708


>gi|239932432|ref|ZP_04689385.1| carbamoyl phosphate synthase large subunit [Streptomyces ghanaensis
           ATCC 14672]
 gi|291440798|ref|ZP_06580188.1| carbamoyl-phosphate synthase large chain [Streptomyces ghanaensis
           ATCC 14672]
 gi|291343693|gb|EFE70649.1| carbamoyl-phosphate synthase large chain [Streptomyces ghanaensis
           ATCC 14672]
          Length = 1102

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L++  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLKEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|227887620|ref|ZP_04005425.1| CoA-binding domain/acetyltransferase domain protein [Escherichia
           coli 83972]
 gi|227835970|gb|EEJ46436.1| CoA-binding domain/acetyltransferase domain protein [Escherichia
           coli 83972]
 gi|307554603|gb|ADN47378.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli ABU 83972]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    K +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAKQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|111224607|ref|YP_715401.1| carbamoyl phosphate synthase pyrimidine specific large subunit
           [Frankia alni ACN14a]
 gi|111152139|emb|CAJ63867.1| carbamoyl phosphate synthase, pyrimidin specific large subunit
           [Frankia alni ACN14a]
          Length = 1261

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P     V +S   A +  + +  P+ V  S +  GGRG
Sbjct: 673 RVLADAGLPSPPHGVATSFPEARAVAERIGYPVLVRPSYVL-GGRG 717


>gi|26248950|ref|NP_754990.1| hypothetical protein c3109 [Escherichia coli CFT073]
 gi|300982308|ref|ZP_07176016.1| CoA binding domain protein [Escherichia coli MS 45-1]
 gi|301047223|ref|ZP_07194315.1| CoA binding domain protein [Escherichia coli MS 185-1]
 gi|26109356|gb|AAN81558.1|AE016764_240 Hypothetical protein yfiQ [Escherichia coli CFT073]
 gi|300300900|gb|EFJ57285.1| CoA binding domain protein [Escherichia coli MS 185-1]
 gi|300408795|gb|EFJ92333.1| CoA binding domain protein [Escherichia coli MS 45-1]
 gi|315294519|gb|EFU53867.1| CoA binding domain protein [Escherichia coli MS 153-1]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    K +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAKQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|110642746|ref|YP_670476.1| hypothetical protein ECP_2586 [Escherichia coli 536]
 gi|191174006|ref|ZP_03035523.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli F11]
 gi|300974111|ref|ZP_07172461.1| CoA binding domain protein [Escherichia coli MS 200-1]
 gi|110344338|gb|ABG70575.1| hypothetical protein YfiQ [Escherichia coli 536]
 gi|190905697|gb|EDV65319.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli F11]
 gi|300308934|gb|EFJ63454.1| CoA binding domain protein [Escherichia coli MS 200-1]
 gi|324014371|gb|EGB83590.1| CoA binding domain protein [Escherichia coli MS 60-1]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    K +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAKQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|82545039|ref|YP_408986.1| hypothetical protein SBO_2616 [Shigella boydii Sb227]
 gi|187731968|ref|YP_001881365.1| acetyltransferase, GNAT family protein [Shigella boydii CDC
           3083-94]
 gi|81246450|gb|ABB67158.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|187428960|gb|ACD08234.1| acetyltransferase, GNAT family protein [Shigella boydii CDC
           3083-94]
 gi|320186387|gb|EFW61121.1| Protein acetyltransferase [Shigella flexneri CDC 796-83]
 gi|332092615|gb|EGI97687.1| acetyltransferase family protein [Shigella boydii 3594-74]
          Length = 886

 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVGHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|161621299|ref|YP_585206.2| acetyl-CoA carboxylase biotin carboxylase subunit [Cupriavidus
           metallidurans CH34]
          Length = 455

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 113/340 (33%), Gaps = 59/340 (17%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V    G +        +  + +  P+ +  +                 
Sbjct: 119 AKQAMIKSGVPCVPGSDGALPDDPKEILATARRVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALLNAVNMTREEAGRAFGNPE----------VYMEKFLENPRHVEIQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           D+    +      +    ++   +   ++     I   LI    +  A  C  +  +G  
Sbjct: 217 DQHRQAIWL---GERDCSMQRRHQKVIEEAPAPHIPRRLIERIGDRCAEACKKIGYRGAG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
             +           + + +   +E+N       P+  M  G  +     +I+F +    R
Sbjct: 274 TFEF---------LYENNEFYFIEMNTRVQVEHPVTEMITGIDIVQEQIRIAFGEKLRLR 324

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGAP 293
             D+ ELR  + E     E       +    G I    M  G G+ + +      +   P
Sbjct: 325 QKDV-ELRGHAIECRINAE---DPFKFTPSPGRITAWHMPGGPGVRVDSHAYDGYF--VP 378

Query: 294 ANF-----LDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
            N+       +  GA +D+  A  +I  S+  V GIL N+
Sbjct: 379 PNYDSMIGKIITYGATRDQAIARMRIALSEMVVDGILTNV 418


>gi|150400989|ref|YP_001324755.1| phosphoribosylglycinamide formyltransferase 2 [Methanococcus
           aeolicus Nankai-3]
 gi|171460851|sp|A6UUH1|PURT_META3 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|150013692|gb|ABR56143.1| phosphoribosylglycinamide formyltransferase 2 [Methanococcus
           aeolicus Nankai-3]
          Length = 391

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 25/138 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
           N+P AK     S+   + A+K +  P  +VK  + + G+G+   K   ++    +    +
Sbjct: 125 NIPTAKYEFAESLEELKKAVKKIGAPC-IVKPIMSSSGKGQSTVK---SEKDEDIEYAWN 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL--SLLVDRTSGMVAF 133
                +     +G                 V VE+  +   E+ L  +     T      
Sbjct: 181 YAQAGA---RGIGK---------------KVIVEEFINFDYEITLLTARTAHGTVYCPP- 221

Query: 134 IASTQGGMDIEEVAKDYP 151
           I   Q G D  E  + +P
Sbjct: 222 IGHIQDGGDYIESWQPHP 239


>gi|293365135|ref|ZP_06611852.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307702160|ref|ZP_07639120.1| hypothetical protein SMSK23_0006 [Streptococcus oralis ATCC 35037]
 gi|291316585|gb|EFE57021.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307624173|gb|EFO03150.1| hypothetical protein SMSK23_0006 [Streptococcus oralis ATCC 35037]
          Length = 388

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A+K +  P+ + K     G      FK    D   
Sbjct: 117 KKLFKKAGVPVVPGTVIQTEADVDKAVKEIGLPM-IAKPDNGVG--AAATFKLETEDDVN 173

Query: 69  GVRVESS 75
             + E  
Sbjct: 174 HFKAEWD 180


>gi|240102798|ref|YP_002959107.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA)
           [Thermococcus gammatolerans EJ3]
 gi|239910352|gb|ACS33243.1| Acetyl-CoA synthetase (ADP forming), alpha chain (acdA)
           [Thermococcus gammatolerans EJ3]
          Length = 474

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 29/190 (15%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +A+++   I    D                     D  IG + +G G  +   D +  +G
Sbjct: 279 DAVFKQTGIIRAEDFEHMFDLAKAFAALKDKLPKGD-RIGIITDGGGAGVMASDAVAKFG 337

Query: 291 GA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF 329
                                    N  DV G  D ++   A +   +D +V  IL+ + 
Sbjct: 338 LRMAELSEETIKFLKENFPPHAVAGNPTDVVGDTDAERYRVAIEGFVNDPNVDAILVIVL 397

Query: 330 GGIMRCDVLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITAIDLDDAA 388
             +   +      + A  + K + P+V + + G   D   R++ E G+ V          
Sbjct: 398 FQVPLLEEEKIIDILAEYQKKSDKPIVAVAMGGKKTDRYARMLEEKGVPVYPTP------ 451

Query: 389 QKIVHAVKGV 398
           ++ V A+ G+
Sbjct: 452 ERGVRALAGL 461


>gi|225851167|ref|YP_002731401.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Persephonella
           marina EX-H1]
 gi|225645341|gb|ACO03527.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Persephonella
           marina EX-H1]
          Length = 478

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K  +++  VPV  G    I+ +  A+   + +  P+ ++K+    GGRG
Sbjct: 123 SKKAMKEVGVPVLPGTDEPITDIDYAKKIAREIGFPV-IIKAAYGGGGRG 171


>gi|225028541|ref|ZP_03717733.1| hypothetical protein EUBHAL_02820 [Eubacterium hallii DSM 3353]
 gi|224954142|gb|EEG35351.1| hypothetical protein EUBHAL_02820 [Eubacterium hallii DSM 3353]
          Length = 1154

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 10/95 (10%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +  + NVP+  G    I  V  A+     +  P+ ++K+    GGRG          
Sbjct: 128 SKKIAIEANVPIIPGVDYAIKEVDEAKKIAAQVGYPV-MLKASNGGGGRGMRIVNREED- 185

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
                 +E       ++ ++  G  +I  +    G
Sbjct: 186 ------LEKEFNEAKNESKKAFGDDMIFIEKYLKG 214


>gi|313897758|ref|ZP_07831299.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. HGF2]
 gi|312957293|gb|EFR38920.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. HGF2]
          Length = 1071

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++   +L K ++P  +G     V  A      +  P+ V  S +  GGR     + + 
Sbjct: 668 HEFE--EMLHKLDIPQPQGETAVEVEEAVKIANRIGYPVLVRPSYVL-GGRAM---EIVH 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            D    V + +++K +  D   ++   +I K+ 
Sbjct: 722 NDDDLRVYMATAVKEISHDAPILVDKYIIGKEM 754



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 51/184 (27%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+ +   PV + V++ ++  A +       P+ V               +        
Sbjct: 133 RELMYEIGEPVPESVIVHTIEEAVAFACENGYPVVV---------------RPAFTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     S + +            +    G   S V+   +E      +E+   ++  R +
Sbjct: 178 GGGFAHSEEELR-----------VICDNGLKISPVHQCLIEQSIAGYKEIEYEVM--RDN 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQAR 184
              A +      +D   V       I         D   G+       +   L++ G   
Sbjct: 225 ADNAIVVCNMENVDP--VGIHTGDSIVVAPTQTLTDRECGIMRASALKIIRALKICGGCN 282

Query: 185 IDGG 188
           +   
Sbjct: 283 VQLA 286


>gi|281411775|ref|YP_003345854.1| carbamoyl-phosphate synthase, large subunit [Thermotoga
           naphthophila RKU-10]
 gi|281372878|gb|ADA66440.1| carbamoyl-phosphate synthase, large subunit [Thermotoga
           naphthophila RKU-10]
          Length = 1099

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 15/76 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++  +        SSV  A    + L  P+ V  S +  G                 
Sbjct: 667 KLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRPSYVLGG---------------RA 711

Query: 70  VRVESSLKSVISDIRE 85
           + +  + + +   ++E
Sbjct: 712 MAIVDTPQELEMYVKE 727



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 33/169 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + V +  +++++  A    +    P+ +         R              
Sbjct: 133 KETMEKAGLEVLRSRLVNNLADALETAREFGYPVII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +   + + L  +            V+ V +E+     +E  L ++ D   
Sbjct: 181 ---IAFNEEELRDIVTKGLIES-----------PVHTVLIEESVLGWKEYELEVVRDGAG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             +           IE +          + + P   +T  +   + D  
Sbjct: 227 NFIVV-------CSIENLDPMGIHTGDSITVAPAQTLTDVEYQRMRDAA 268


>gi|238760271|ref|ZP_04621415.1| Phosphoribosylamine--glycine ligase [Yersinia aldovae ATCC 35236]
 gi|238701535|gb|EEP94108.1| Phosphoribosylamine--glycine ligase [Yersinia aldovae ATCC 35236]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|148269507|ref|YP_001243967.1| carbamoyl-phosphate synthase, large subunit [Thermotoga petrophila
           RKU-1]
 gi|167006453|sp|A5IJL8|CARB_THEP1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|147735051|gb|ABQ46391.1| carbamoyl-phosphate synthase large subunit [Thermotoga petrophila
           RKU-1]
          Length = 1099

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 15/76 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++  +        SSV  A    + L  P+ V  S +  G                 
Sbjct: 667 KLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRPSYVLGG---------------RA 711

Query: 70  VRVESSLKSVISDIRE 85
           + +  + + +   ++E
Sbjct: 712 MAIVDTPQELEMYVKE 727



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 33/169 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + V +  +++++  A    +    P+ +         R              
Sbjct: 133 KETMEKAGLEVLRSRLVNNLADALETAREFGYPVII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +   + + L  +            V+ V +E+     +E  L ++ D   
Sbjct: 181 ---IAFNEEELRDIVTKGLIES-----------PVHTVLIEESVLGWKEYELEVVRDGAG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             +           IE +          + + P   +T  +   + D  
Sbjct: 227 NFIVV-------CSIENLDPMGIHTGDSITVAPAQTLTDVEYQRMRDAA 268


>gi|118470258|ref|YP_886190.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171545|gb|ABK72441.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Mycobacterium smegmatis str. MC2 155]
          Length = 408

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 41/204 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L     P+ +   +++   A+   + + G   V+K+ I  G  G+            GV 
Sbjct: 119 LADLGAPIPQFAEVTAADEAQEFSREVGGA-AVIKT-IRGGYDGR------------GVV 164

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  + +       + L            G     + +E+   + RE  LS LV R++   
Sbjct: 165 LLDTPEQAREVAAKYL----------TDGVP---ILIEERVAMRRE--LSALVARSAFG- 208

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
                   G     V       I   +I P   +  +D+A+    L L+  A +    + 
Sbjct: 209 -------QGSAWPVVQTVQRDGICVEVIAPAPDL-PDDLAASAQQLGLRLAAELGVIGVL 260

Query: 192 PNLYKAFCDKDMSLLEINPLIIMK 215
               + F   D  +L +N L +  
Sbjct: 261 A--VELFETVDGRIL-VNELAMRP 281


>gi|15643323|ref|NP_228367.1| carbamoyl-phosphate synthase, large subunit [Thermotoga maritima
           MSB8]
 gi|22095541|sp|Q9WZ27|CARB_THEMA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|4981072|gb|AAD35642.1|AE001730_10 carbamoyl-phosphate synthase, large subunit [Thermotoga maritima
           MSB8]
          Length = 1099

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 15/76 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++  +        SSV  A    + L  P+ V  S +  G                 
Sbjct: 667 KLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRPSYVLGG---------------RA 711

Query: 70  VRVESSLKSVISDIRE 85
           + +  + + +   ++E
Sbjct: 712 MAIVDTPQELEMYVKE 727



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 33/169 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + V +  +++++  A    +    P+ +         R              
Sbjct: 133 KETMEKAGLEVLRSRLVNNLADALETAREFGYPVII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +   + + L  +            V+ V +E+     +E  L ++ D   
Sbjct: 181 ---IAFNEEELRDIVTKGLIES-----------PVHTVLIEESVLGWKEYELEVVRDGAG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             +           IE +          + + P   +T  +   + D  
Sbjct: 227 NFIVV-------CSIENLDPMGIHTGDSITVAPAQTLTDVEYQRMRDAA 268


>gi|330444953|ref|ZP_08308607.1| phosphoribosylamine--glycine ligase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328493071|dbj|GAA03104.1| phosphoribosylamine--glycine ligase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + +  A + +K    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEIEPALAYLKQKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +     +R++L         G  G RV    +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTEQEAEDAVRDMLA----GNAFGEAGHRV---VIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|318040501|ref|ZP_07972457.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. CB0101]
          Length = 450

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 100/277 (36%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++   VP   G   ++ +V  A +  +++  P+ ++K+    GGR           
Sbjct: 120 AKATMQSVGVPTIPGSEGLLENVDQARTLAESMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   + +     L      +     G+    +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVPSPDQLDN-----LFKAAQGEAEAAFGNP--GLYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQAR 184
           R       +   +    I+   +   ++   + I+  +     D A +    +  +G   
Sbjct: 218 RHGN---VVHVGERDCSIQRRHQKLLEEAPSVAINADLRKQMGDAAVAAARTIGYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D   + Y  F + +  +   +P+  M  G  L     +I+  +    R  +IQ L
Sbjct: 275 VEFLVDRTGHFY--FMEMNTRIQVEHPVTEMVTGVDLIAEQLRIAGGEPISLRQEEIQ-L 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
           R  + E     E  + N       G I       G G
Sbjct: 332 RGHAIEVRINAEDPRQNFR--PAPGKITGWLPPGGPG 366


>gi|291006756|ref|ZP_06564729.1| acyl-CoA synthetase (NDP forming type) [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 904

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 51/246 (20%)

Query: 7   QAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Q + +L  + +P V   V    V    +A +++ G + VVK+ +      +         
Sbjct: 687 QVQRVLTAFGLPAVPTTVCADEV-ELLAAFRSMTGRV-VVKAWVPGLVHKER-------- 736

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + G V   +++  V S    + G           G  ++ V ++   +  RE  + +  D
Sbjct: 737 AGGVVLDVTTVGEVRSAWSRLHGRF---------GEALHGVLLQPMVEPGREFLVGVHSD 787

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------- 177
              G V       GG+D + VA    + +          +T  D A++   L        
Sbjct: 788 SVFGPVVVFG--LGGVDTDVVADRSHRLVP---------LTDRDAAAMLGELRSSAALFG 836

Query: 178 -----ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                 L   A  D       + +   +  ++ +++NP+++   G     D++I      
Sbjct: 837 ERSVAALDTAALTDVSLRTARMAELLPE--VTEVDLNPVVVTGEGACIA-DARIRV---- 889

Query: 233 LYRHLD 238
             R  D
Sbjct: 890 RRREPD 895


>gi|242310413|ref|ZP_04809568.1| phosphoribosylamine-glycine ligase [Helicobacter pullorum MIT
           98-5489]
 gi|239522811|gb|EEQ62677.1| phosphoribosylamine-glycine ligase [Helicobacter pullorum MIT
           98-5489]
          Length = 419

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K   ++Y +P A+ +       A   I TL  P+ VVK+     G+              
Sbjct: 105 KEFAKRYGIPTAQFIQTQDYKEACDFIDTLNLPI-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +   S  +E+L      K  G +G     V +E+  D
Sbjct: 150 GVIIAQSYEEAKSVTKEMLD----GKSFGDSGK---KVVIEEFLD 187


>gi|149019270|ref|ZP_01834632.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|147931140|gb|EDK82119.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP23-BS72]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|17231301|ref|NP_487849.1| carbamoyl phosphate synthase large subunit [Nostoc sp. PCC 7120]
 gi|22095512|sp|Q8YQL2|CARB_ANASP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|17132943|dbj|BAB75508.1| carbamoyl phosphate synthetase large chain [Nostoc sp. PCC 7120]
          Length = 1104

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 36/173 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +      V V      SS+  +++  + +     +++     GG G G       
Sbjct: 129 RKLFNEAMDKIGVKVCPSGTASSLDESKAIARRIGTYPLIIRPAFTMGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +                 Q G   S V+ + ++      +E  L ++ 
Sbjct: 182 -------IAYNQEEFEEMA-----------QVGIDASPVSQILIDQSLLGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           D  +  V  I S +   +I+ +       I    + P   +T ++   L DM 
Sbjct: 224 D-LADNVVIICSIE---NIDPMGIHTGDSI---TVAPAQTLTDKEYQRLRDMA 269


>gi|238790631|ref|ZP_04634396.1| Phosphoribosylamine--glycine ligase [Yersinia frederiksenii ATCC
           33641]
 gi|238721300|gb|EEQ12975.1| Phosphoribosylamine--glycine ligase [Yersinia frederiksenii ATCC
           33641]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|315445621|ref|YP_004078500.1| phosphoribosylaminoimidazole carboxylase [Mycobacterium sp. Spyr1]
 gi|315263924|gb|ADU00666.1| phosphoribosylaminoimidazole carboxylase [Mycobacterium sp. Spyr1]
          Length = 387

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 27/107 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   PV +   + SV  A +  + + GP  V+K+ +  G  G+            GV 
Sbjct: 103 LSELGAPVPRFSAVLSVEDAVAFSEHVGGP-AVIKT-VRGGYDGR------------GVV 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           + +    V S +   L            G  V    +E+   + REL
Sbjct: 149 IAADTDEVRSAVERYL----------ADGVPV---MIEERVAMRREL 182


>gi|303261595|ref|ZP_07347542.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|303267153|ref|ZP_07353021.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS457]
 gi|303268446|ref|ZP_07354241.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS458]
 gi|302637175|gb|EFL67663.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|302642052|gb|EFL72404.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS458]
 gi|302643314|gb|EFL73593.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS457]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|193215448|ref|YP_001996647.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Chloroherpeton thalassium ATCC 35110]
 gi|193088925|gb|ACF14200.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Chloroherpeton thalassium ATCC 35110]
          Length = 383

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 74/204 (36%), Gaps = 42/204 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+ + +PV++   I S +AA    K L  P  +         R K  +         
Sbjct: 112 KTVLKDHGLPVSQFYPIDSENAAYECGKNLGYPFLIK--------RRKHGYDGYGN---- 159

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             R   S   +   + E+             G   + VY E   D   EL  +++    +
Sbjct: 160 --RTVHSEHDIPQALAEL-------------GFPNHSVYAEGFIDFELEL-ATMIARSKT 203

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
           G +     T   ++  +        I K +I P   ++S  +  +  + +     R+DG 
Sbjct: 204 GEIV----TYPVVETIQENH-----ICKYVIAPAR-LSSTLIDEVISLAK-SAIERLDGV 252

Query: 189 DLFPNLYKAFCDKDMSLLEINPLI 212
            +F    + F D D ++L IN L 
Sbjct: 253 GIFG--VEMFLDTDANIL-INELA 273


>gi|154148753|ref|YP_001406899.1| carbamoyl phosphate synthase large subunit [Campylobacter hominis
           ATCC BAA-381]
 gi|153804762|gb|ABS51769.1| carbamoyl-phosphate synthase, large subunit [Campylobacter hominis
           ATCC BAA-381]
          Length = 1086

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + + K     ++  A +A   +  P+ +  S    G                
Sbjct: 131 KEAMLKIGMDLPKSEYAYNMDEAMNAANDIGFPVMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++                  Q G   S ++ + +E+     +E  + ++ D   
Sbjct: 176 GSGVAYNIDEFKELA-----------QNGIEISPIHEILIEESLLGWKEFEMEVIRDHKD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE +          + + P + +T ++   + D 
Sbjct: 225 NCIIV-------CSIENLDPMGVHTGDSITVAPALTLTDKEYQKMRDA 265


>gi|119867365|ref|YP_937317.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium sp. KMS]
 gi|119693454|gb|ABL90527.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Mycobacterium
           sp. KMS]
          Length = 393

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 43/205 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L     P+ +   + +V    +    + GP+ V+K+ +  G  G+            GV 
Sbjct: 103 LEAMGAPIPRYTAVDTVDDVVAFSSEVDGPV-VLKT-VRGGYDGR------------GVV 148

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + +  +         L            G     +  E+  D+ RE  L+ LV R     
Sbjct: 149 LTADAEEARDVAARYL----------ADGVP---ILAEERVDMRRE--LAALVAR----- 188

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V       I  +++ P   ++ +  +S    L L+  A +    +
Sbjct: 189 ----SPFGQGAAWPVVETVQRDGICVVVLAPAPELSDDLGSS-AQQLGLKLAAELGVVGV 243

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK 215
                + F   D  LL +N L +  
Sbjct: 244 LA--VELFETVDGRLL-VNELAMRP 265


>gi|55379310|ref|YP_137160.1| ribosomal protein S6 modification protein [Haloarcula marismortui
           ATCC 43049]
 gi|55232035|gb|AAV47454.1| ribosomal protein S6 modification protein [Haloarcula marismortui
           ATCC 43049]
          Length = 326

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 33/108 (30%), Gaps = 17/108 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VP     V  +  AA  +I+    P  V+K  + + GR   +             
Sbjct: 97  LEAAGVPTPNTDVAFTKDAALESIEKFGYPC-VLKPVVGSWGRLMAKIDS---------- 145

Query: 72  VESSLKSVISDIREILG----STLITKQTGPTGSRVNCVYVEDGADIL 115
              S    I + +E LG         ++      R   V   DG  I 
Sbjct: 146 --RSAAEAILEHKETLGHYEHKIFYVQEFVEKPGRDMRVLAVDGEPIA 191


>gi|326560479|gb|EGE10861.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis 7169]
          Length = 423

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V + + AA+  ++    P+ V+K+   A G+             
Sbjct: 108 AKEFMQKYGIPTAYYQVFTEIEAAKRYVREKGTPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V     +    I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMDEATAFDAIDDMLD----GNKFGDAG---SRVVIEQFLSGEEASFICMI 201


>gi|229545613|ref|ZP_04434338.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX1322]
 gi|256619269|ref|ZP_05476115.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis ATCC
           4200]
 gi|256853330|ref|ZP_05558700.1| phosphoribosylamine-glycine ligase [Enterococcus faecalis T8]
 gi|307275761|ref|ZP_07556901.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX2134]
 gi|307291782|ref|ZP_07571654.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0411]
 gi|229309271|gb|EEN75258.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX1322]
 gi|256598796|gb|EEU17972.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis ATCC
           4200]
 gi|256711789|gb|EEU26827.1| phosphoribosylamine-glycine ligase [Enterococcus faecalis T8]
 gi|306497234|gb|EFM66779.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0411]
 gi|306507637|gb|EFM76767.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX2134]
 gi|315029489|gb|EFT41421.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX4000]
 gi|315032097|gb|EFT44029.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0017]
 gi|315144875|gb|EFT88891.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX2141]
          Length = 415

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEKQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|212638088|ref|YP_002314608.1| phosphoribosylamine--glycine ligase [Anoxybacillus flavithermus
           WK1]
 gi|212559568|gb|ACJ32623.1| Phosphoribosylglycinamide synthetase [Anoxybacillus flavithermus
           WK1]
          Length = 426

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++RKYN+P A     ++   A   +     P+ V+K+   A G+             
Sbjct: 106 AKEMMRKYNIPTANYATFTNYDEAVQYVHEQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++   +  + +I    ++ K+ G  G+    V +E       E  L   V   
Sbjct: 152 -GVTVAMTIDEALHALHDI----MVAKKFGEAGA---QVVIEQYLQ-GEEFSLMTFVHGE 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 RVYPMVIA 210


>gi|194398207|ref|YP_002037878.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae G54]
 gi|226700937|sp|B5E512|CARB_STRP4 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|194357874|gb|ACF56322.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Streptococcus pneumoniae G54]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|157382760|gb|ABV48817.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 95

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAP---ANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I    G     AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLAGGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDPK 60

Query: 321 VKGILINIFGGIMRCDVL---VKGILSAVKE 348
            +  ++ I G I     +     GI+ A ++
Sbjct: 61  GRDKILIIGGAIANFTDVTKTFTGIIQAFEK 91


>gi|169832659|ref|YP_001694700.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae Hungary19A-6]
 gi|226700938|sp|B1IC65|CARB_STRPI RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|168995161|gb|ACA35773.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|170288181|ref|YP_001738419.1| carbamoyl-phosphate synthase, large subunit [Thermotoga sp. RQ2]
 gi|226700943|sp|B1L8T8|CARB_THESQ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|170175684|gb|ACB08736.1| carbamoyl-phosphate synthase, large subunit [Thermotoga sp. RQ2]
          Length = 1099

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 15/76 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++  +        SSV  A    + L  P+ V  S +  G                 
Sbjct: 667 KLLKQIGLKCPPFGTASSVEEALRVAENLGYPVLVRPSYVLGG---------------RA 711

Query: 70  VRVESSLKSVISDIRE 85
           + +  + + +   ++E
Sbjct: 712 MAIVDTPQELEMYVKE 727



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 49/170 (28%), Gaps = 33/170 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + V +  +++++  A    +    P+ +         R              
Sbjct: 133 KETMEKAGLEVLRSRLVNNLADALETAREFGYPVII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +   + + L  +            V+ V +E+     +E  L ++ D   
Sbjct: 181 ---IAFNEEELRDIVTKGLIES-----------PVHTVLIEESVLGWKEYELEVVRDGAG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             +           IE +          + + P   +T  +   + D   
Sbjct: 227 NFIVV-------CSIENLDPMGIHTGDSITVAPAQTLTDVEYQRMRDAAH 269


>gi|148985175|ref|ZP_01818414.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922620|gb|EDK73738.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|301800188|emb|CBW32796.1| carbamoyl-phosphate synthase large chain [Streptococcus pneumoniae
           OXC141]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|86610329|ref|YP_479091.1| cyanophycin synthetase, truncation [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558871|gb|ABD03828.1| cyanophycin synthetase, truncation [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 649

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 1/83 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA L     PV +G V++S+  A    + +  P+ V+K      G G     + P +   
Sbjct: 221 KAFLAAQGFPVPQGEVVASLAEALQQAQEIGYPV-VLKPVAGHKGIGVTAGIQTPEELAF 279

Query: 69  GVRVESSLKSVISDIREILGSTL 91
              V  +       IR IL   L
Sbjct: 280 AYEVAVAALPPEEPIRLILEKHL 302


>gi|16272828|ref|NP_439049.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae Rd
           KW20]
 gi|260579979|ref|ZP_05847809.1| phosphoribosylamine-glycine ligase [Haemophilus influenzae RdAW]
 gi|1172752|sp|P43845|PUR2_HAEIN RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|1573905|gb|AAC22545.1| phosphoribosylamine--glycine ligase (purD) [Haemophilus influenzae
           Rd KW20]
 gi|260093263|gb|EEW77196.1| phosphoribosylamine-glycine ligase [Haemophilus influenzae RdAW]
          Length = 429

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 25/139 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALTYLREKGTPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVAFIASTQGGMDIEEVA 147
                +AS+Q    + E  
Sbjct: 206 VEP--MASSQDHKRVGEND 222


>gi|14521010|ref|NP_126485.1| GMP synthase subunit B [Pyrococcus abyssi GE5]
 gi|13626967|sp|Q9V0I7|GUAAB_PYRAB RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|5458227|emb|CAB49716.1| guaA-C GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit
           (EC 6.3.5.2) [Pyrococcus abyssi GE5]
          Length = 308

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A K +   L+ V        +G+  F       + G+ +         D +
Sbjct: 31  VDSSTAAVLAYKAIGDKLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHY------VDAQ 84

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           +   S L          ++   V++E   ++ RE+    L+  T     +I S QG +  
Sbjct: 85  DRFFSALKGVTDPEEKRKIIGRVFIEVFEEVAREIGAEYLIQGTIA-PDWIES-QGKIKS 142

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+++   LI+PL  +  ++V  L   L L 
Sbjct: 143 HHNVGGLPERLNLKLIEPLRDLYKDEVRELAKFLGLP 179


>gi|332074887|gb|EGI85359.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA41301]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|301794351|emb|CBW36778.1| carbamoyl-phosphate synthase large chain [Streptococcus pneumoniae
           INV104]
 gi|332203124|gb|EGJ17192.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA47901]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|300935718|ref|ZP_07150687.1| CoA binding domain protein [Escherichia coli MS 21-1]
 gi|300459107|gb|EFK22600.1| CoA binding domain protein [Escherichia coli MS 21-1]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + +  D   G +  +   +GG++        P+    + + PL       + +      
Sbjct: 586 RVVVEYDPVFGPLIMLG--EGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|225856936|ref|YP_002738447.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae P1031]
 gi|254813663|sp|C1CL09|CARB_STRZP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|225725308|gb|ACO21160.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae P1031]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|225182118|ref|ZP_03735545.1| carbamoyl-phosphate synthase, large subunit [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167181|gb|EEG76005.1| carbamoyl-phosphate synthase, large subunit [Dethiobacter
           alkaliphilus AHT 1]
          Length = 1066

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +A+     SV  A    K L  P+ V  +    G                
Sbjct: 133 KESMNKLGIEMARSEPAYSVEEAVEIAKELGFPVVVRPAYTMGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + S     + +++           V  V +E+      EL L ++ D   
Sbjct: 178 GGGLVYNVEELESIAARGISASM-----------VGQVLIEESVLGWEELELEVVRDSKG 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 QMITV 231


>gi|218701099|ref|YP_002408728.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli IAI39]
 gi|218371085|emb|CAR18914.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli IAI39]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + +  D   G +  +   +GG++        P+    + + PL       + +      
Sbjct: 586 RVVVEYDPVFGPLIMLG--EGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|168575730|ref|ZP_02721645.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae MLV-016]
 gi|183578166|gb|EDT98694.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae MLV-016]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|168491194|ref|ZP_02715337.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|183574365|gb|EDT94893.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC0288-04]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|197251689|ref|YP_002147555.1| CoA binding domain/acetyltransferase domain-containing protein
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197215392|gb|ACH52789.1| CoA binding domain/acetyltransferase domain protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 639 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 698 DGDNESR----LAVRPYPNQLEEWVEMKNGD 724


>gi|149007057|ref|ZP_01830726.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae SP18-BS74]
 gi|307127134|ref|YP_003879165.1| carbamoyl-phosphate synthase large subunit [Streptococcus
           pneumoniae 670-6B]
 gi|147761361|gb|EDK68327.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae SP18-BS74]
 gi|306484196|gb|ADM91065.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae 670-6B]
 gi|332074609|gb|EGI85083.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA17545]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|62086813|dbj|BAD92013.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Trachemys scripta]
          Length = 993

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA L ++ +P A+    ++   A S I ++  P  VVK+   A G+             
Sbjct: 94  AKAFLDRHGIPTARWKAFTNPEDACSFITSVDFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V ++ +     + EI      T         V  + V +   
Sbjct: 141 -GVIVATNKEGACKAVHEI--MQDKTFGAAGETVVVEELLVGEEVS 183


>gi|115523752|ref|YP_780663.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris
           BisA53]
 gi|115517699|gb|ABJ05683.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris
           BisA53]
          Length = 902

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 90/288 (31%), Gaps = 61/288 (21%)

Query: 157 LLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
           L +D    +    +      + L  ++  D          A          + P++++K+
Sbjct: 189 LDVDIADLLDHFALDYKTRAILLYVESITDARKFMSAARAAAR--------VKPVVVVKS 240

Query: 217 GRLRVL--------DSKISFD--DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALD 266
           GR+            +    D   +A +R   +  + ++ E       A+          
Sbjct: 241 GRMAAGAKAAATHTGALAGEDAVYDAAFRRAGMLRVYNLRELFDC---AETLGRITAPRG 297

Query: 267 GNIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGGGADQ 305
             +  + NG G+ +  +D +   GG PA                     N +D+ G AD 
Sbjct: 298 KRLAIVTNGGGIGVLAVDRLVELGGTPALISAPTMKRLNAALPATWSGSNPIDLVGDADS 357

Query: 306 DKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEV-----KINIPLVMRL 359
           ++   A + + +D     +L+ N+   I     +   +   V E           L + +
Sbjct: 358 ERYGEALEALLADPENDAVLVMNVQTAISGASEIAATVARIVNENRAARSPAKPVLTVWI 417

Query: 360 EGANVDIGNRLIAESGLNVITAIDLDDAA---------QKIVHAVKGV 398
            G   D   R    + +      D  DA          ++ V A+  V
Sbjct: 418 GGG--DSATRTFDAAAIPNYPTED--DAVRGFMHLVQYREAVEALSEV 461


>gi|332800374|ref|YP_004461873.1| carbamoyl-phosphate synthase, large subunit [Tepidanaerobacter sp.
           Re1]
 gi|332698109|gb|AEE92566.1| carbamoyl-phosphate synthase, large subunit [Tepidanaerobacter sp.
           Re1]
          Length = 1063

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 59/187 (31%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+     PV    ++ S+  A +  K    PL V  +    G             + G
Sbjct: 133 KKLMEDIGEPVPDSRIVHSLEEARNFAKEAGLPLIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV   ++ + ++      L  +           R++ V +E     ++E+   ++ D   
Sbjct: 180 GV--ANTEEELMEITYNGLRLS-----------RIHQVLLEKSLLGMKEIEFEVIRDGKD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQG 181
             +          D+E +          +++ P   +T  +          +   L ++G
Sbjct: 227 QCICI-------CDMENIDPVGIHTGDSVVVAPSQTLTDAEYNKLKAASFKIIRALGIEG 279

Query: 182 QARIDGG 188
              +   
Sbjct: 280 GCNVQYA 286



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 1/94 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P  K     SV  A +    +  P+ V  S +  GGR       +       
Sbjct: 672 DLLSELGIPRPKATAARSVEEALAKAGEIGFPMLVRPSYVL-GGRAMEIVYNMKELKNYM 730

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                +       I   +G T +       G  V
Sbjct: 731 ENAVEASSEKPVLIDRYIGGTEVEVDAVCDGKEV 764


>gi|326570442|gb|EGE20482.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis BC8]
          Length = 423

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V + + AA+  ++    P+ V+K+   A G+             
Sbjct: 108 AKEFMQKYGIPTAYYQVFTEIEAAKRYVREKGTPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V     +    I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMDEATAFDAIDDMLD----GNKFGDAG---SRVVIEQFLSGEEASFICMI 201


>gi|265750481|ref|ZP_06086544.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_1_33FAA]
 gi|263237377|gb|EEZ22827.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_1_33FAA]
          Length = 389

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 33/154 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A K +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKSLEELKEAAKEIGFPC-VVKPLMSSSGKGQSL--------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 158 --VKSADELEQAWHY-----------GCEGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
                      G +   +   DY +      IDP
Sbjct: 202 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDP 232


>gi|238879069|gb|EEQ42707.1| urea amidolyase [Candida albicans WO-1]
          Length = 1813

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    ++     A +    L  P+ V KS    GG G  +      
Sbjct: 730 HSAREIAEKAGVPLVPGSGLVKDAKEARAIAAKLEYPIMV-KSTAGGGGIGLQK------ 782

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S              + V++E   +  R + + +L 
Sbjct: 783 -----VDSEKDIERVFETVQHQGKSYFGD----------SGVFLERFVENARHVEIQMLG 827

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L      +
Sbjct: 828 DGYGNAIAV------GERDCSLQRRNQKIIEETPAPNLPEETRNKMRKAAESLGSSM--K 879

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 880 YKCAGTVEYIYDP-KRDEFYFLEVNA 904


>gi|239917819|ref|YP_002957377.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665]
 gi|281413688|ref|ZP_06245430.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665]
 gi|239839026|gb|ACS30823.1| acyl-CoA synthetase (NDP forming) [Micrococcus luteus NCTC 2665]
          Length = 909

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 10/97 (10%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y + V       +   A +A + L  P+ +     H   R       L       V
Sbjct: 693 LLGHYGITVLPSARFETADEAVAAAERLGFPVALKAVDPHLRHRLDLGGVRLN------V 746

Query: 71  RVESSLKSVISDIREILG----STLITKQTGPTGSRV 103
               SL+  +  +R +L       L  +   P G   
Sbjct: 747 VDADSLRRNVEHMRRLLAPFGVRELEVQAMAPAGQAC 783


>gi|72162527|ref|YP_290184.1| hypothetical protein Tfu_2128 [Thermobifida fusca YX]
 gi|71916259|gb|AAZ56161.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 907

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 25/179 (13%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F+ + + R  DI ++ DV++  + +   K            +G + N A L +   D   
Sbjct: 457 FEQSGVVRVEDITQMFDVAQLFAYQPLPKGP---------RVGIIGNSAALELLVKDACV 507

Query: 288 LYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
             G  P   +D+G  A +   A A     +D  V  +++     I     +  G+   ++
Sbjct: 508 RAGLHPLEPVDLGPNATERDFAEALDAALADDGVHSLVVVF---IPALAPISSGVAEVMR 564

Query: 348 E--VKINIPLVMRLEGAN--------VDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
           E   +   P+V    G          V  G   +  S +    A   +DA + + HA +
Sbjct: 565 ERSARATKPIVTAYLGHQGVPEELRLVGEGGETLRGS-VPSYPAP--EDAVRALAHATR 620



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS-----QIHAGGRG 55
           A+ LL  Y +PV   + + S   A +A + L  P+ VVK+     ++ AGGRG
Sbjct: 683 ARELLGCYGIPVEPYIPVHSADEAAAAAEQLGYPV-VVKANSPDLRLRAGGRG 734


>gi|238794944|ref|ZP_04638541.1| Phosphoribosylamine--glycine ligase [Yersinia intermedia ATCC
           29909]
 gi|238725702|gb|EEQ17259.1| Phosphoribosylamine--glycine ligase [Yersinia intermedia ATCC
           29909]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|297530689|ref|YP_003671964.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           C56-T3]
 gi|297253941|gb|ADI27387.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           C56-T3]
          Length = 1065

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 18/103 (17%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  +P   G    SV  A +  + +  P+ V  S +  G                 + 
Sbjct: 674 LSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG---------------RAME 718

Query: 72  VESSLKSV---ISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           +  + + +   +     +     +      TG  V    + DG
Sbjct: 719 IVYNREELLHYMEHAVRVNPQHPVLVDRYITGKEVEVDAIADG 761



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  +I S+  A + ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIIHSLEEAYAFVEQIGYPVIV 168


>gi|261207679|ref|ZP_05922364.1| phosphoribosylglycinamide synthetase [Enterococcus faecium TC 6]
 gi|289565797|ref|ZP_06446240.1| phosphoribosylamine-glycine ligase [Enterococcus faecium D344SRF]
 gi|294615894|ref|ZP_06695736.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1636]
 gi|294620306|ref|ZP_06699623.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1679]
 gi|260078062|gb|EEW65768.1| phosphoribosylglycinamide synthetase [Enterococcus faecium TC 6]
 gi|289162435|gb|EFD10292.1| phosphoribosylamine-glycine ligase [Enterococcus faecium D344SRF]
 gi|291591280|gb|EFF22947.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1636]
 gi|291593447|gb|EFF25004.1| phosphoribosylamine--glycine ligase [Enterococcus faecium E1679]
          Length = 424

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMDTYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G+    + VE+         L+ + D  
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GNSSKKIVVEEFLAGEEFSLLAFVRDTK 204

Query: 128 SGMVAF 133
              +  
Sbjct: 205 VYPMVI 210


>gi|257884782|ref|ZP_05664435.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,501]
 gi|257820620|gb|EEV47768.1| phosphoribosylglycinamide synthetase [Enterococcus faecium
           1,231,501]
          Length = 424

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+  Y +P AK         A + IK    P+ VVK+   A G+             
Sbjct: 107 AKQLMDTYQIPTAKSRSFECYEKAAAYIKENGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +++K  +    ++L            G     + VE+         L+ + D  
Sbjct: 153 -GVVVATTVKEALDAAEQMLNQHRF-------GDSSKKIVVEEFLAGEEFSLLAFVRDTK 204

Query: 128 SGMVAF 133
              +  
Sbjct: 205 VYPMVI 210


>gi|257465544|ref|ZP_05629915.1| phosphoribosylamine--glycine ligase [Actinobacillus minor 202]
 gi|257451204|gb|EEV25247.1| phosphoribosylamine--glycine ligase [Actinobacillus minor 202]
          Length = 430

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|307153080|ref|YP_003888464.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 7822]
 gi|306983308|gb|ADN15189.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 7822]
          Length = 421

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 74/223 (33%), Gaps = 42/223 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  VP A G   S   AA++ IK    P+ VVK+   A G+             
Sbjct: 108 AKALMIEAGVPTAIGESFSDPDAAKAYIKQQGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  +  +        + G T   V    V +   +L       L D  
Sbjct: 154 -GVIVAQTEEEALKAVDAL-------TEEGFTQIVVEEFLVGEEVSVLT------LTDGL 199

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           +      A     +   +  K+              G+ +   A +     ++   R   
Sbjct: 200 TFRPLIPAQDHKRIGEGDTGKNT------------GGMGAYAPAPVATPEIMERVEREIL 247

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                 L     D    L     L+I  +G+++VL+    F D
Sbjct: 248 APTVAALRNRGIDYRGVLY--AGLMISPDGQVKVLEYNCRFGD 288


>gi|168484509|ref|ZP_02709461.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|172042246|gb|EDT50292.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|332201739|gb|EGJ15809.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA47368]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|148989300|ref|ZP_01820680.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|225854738|ref|YP_002736250.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae JJA]
 gi|254813662|sp|C1CEM9|CARB_STRZJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|147925278|gb|EDK76357.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|225724177|gb|ACO20030.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae JJA]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|86741884|ref|YP_482284.1| carbamoyl phosphate synthase large subunit [Frankia sp. CcI3]
 gi|86568746|gb|ABD12555.1| carbamoyl-phosphate synthase large subunit [Frankia sp. CcI3]
          Length = 1130

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P     V +S   A +  + +  P+ V  S +  GGRG
Sbjct: 673 RVLARAGLPSPPHGVATSFAEARTVAERIGYPVLVRPSYVL-GGRG 717


>gi|254495507|ref|ZP_05108431.1| carbamoyl-phosphate synthase, large subunit [Polaribacter sp.
           MED152]
 gi|85819863|gb|EAQ41020.1| carbamoyl-phosphate synthase, large subunit [Polaribacter sp.
           MED152]
          Length = 951

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 15/79 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ N+P  +  +  +   A +    L  P+ V  S +  G                G++
Sbjct: 691 LKENNIPYPQFGIAETADEALTLADELDFPILVRPSYVLGG---------------QGMK 735

Query: 72  VESSLKSVISDIREILGST 90
           +  + + ++  + ++LG  
Sbjct: 736 IVINKEELVEHVVDLLGKM 754


>gi|323142084|ref|ZP_08076932.1| phosphoribosylamine--glycine ligase [Phascolarctobacterium sp. YIT
           12067]
 gi|322413471|gb|EFY04342.1| phosphoribosylamine--glycine ligase [Phascolarctobacterium sp. YIT
           12067]
          Length = 425

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KYN+P A   +   +  A++ ++    P+ VVK+   A G+             
Sbjct: 108 SKELMAKYNIPTAFFKICEDIETAKAYVEEKGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  + +  +  I E++
Sbjct: 154 -GVVVAMTKQEALDAIDEMM 172


>gi|307701986|ref|ZP_07638994.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|307616631|gb|EFN95820.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
          Length = 388

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIQTEADVDQAVKEIGLPM 150


>gi|301802065|emb|CBW34797.1| carbamoyl-phosphate synthase large chain [Streptococcus pneumoniae
           INV200]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|168489101|ref|ZP_02713300.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae SP195]
 gi|183572511|gb|EDT93039.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae SP195]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|168487443|ref|ZP_02711951.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|225859069|ref|YP_002740579.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae 70585]
 gi|254813604|sp|C1C7Q3|CARB_STRP7 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|183569715|gb|EDT90243.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|225721866|gb|ACO17720.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae 70585]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|149012332|ref|ZP_01833401.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP19-BS75]
 gi|168493195|ref|ZP_02717338.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|182684209|ref|YP_001835956.1| carbamoyl-phosphate synthase large subunit [Streptococcus
           pneumoniae CGSP14]
 gi|221231963|ref|YP_002511115.1| carbamoyl-phosphate synthase large chain [Streptococcus pneumoniae
           ATCC 700669]
 gi|237649974|ref|ZP_04524226.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae CCRI 1974]
 gi|237821120|ref|ZP_04596965.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|303254479|ref|ZP_07340584.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS455]
 gi|303258912|ref|ZP_07344891.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|303264265|ref|ZP_07350185.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS397]
 gi|226700939|sp|B2IQ67|CARB_STRPS RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|254813605|sp|B8ZJT9|CARB_STRPJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|147763658|gb|EDK70593.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP19-BS75]
 gi|182629543|gb|ACB90491.1| carbamoyl-phosphate synthase large subunit [Streptococcus
           pneumoniae CGSP14]
 gi|183576639|gb|EDT97167.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|220674423|emb|CAR68975.1| carbamoyl-phosphate synthase large chain [Streptococcus pneumoniae
           ATCC 700669]
 gi|302598565|gb|EFL65606.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS455]
 gi|302639855|gb|EFL70311.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|302646077|gb|EFL76304.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae BS397]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|89890796|ref|ZP_01202305.1| carbamoyl-phosphate synthase [Flavobacteria bacterium BBFL7]
 gi|89516941|gb|EAS19599.1| carbamoyl-phosphate synthase [Flavobacteria bacterium BBFL7]
          Length = 950

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 15/81 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L++ ++P  +    ++   A    + L  P+ V  S +  G                G
Sbjct: 689 KMLQENDIPYPEFATATTPAEALQVAEQLDFPILVRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDIREILGST 90
           +++  + + +   + +IL   
Sbjct: 734 MKIVINKEELEEHVVDILRKI 754


>gi|34541046|ref|NP_905525.1| phosphoribosylamine--glycine ligase [Porphyromonas gingivalis W83]
 gi|34397361|gb|AAQ66424.1| phosphoribosylamine--glycine ligase [Porphyromonas gingivalis W83]
          Length = 431

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHA--AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K+ ++++ +P A      +     A  A        YV+K+   A G+           
Sbjct: 111 SKSFMKRHGIPTAAYQ-TFTADQTDAGKAFIDTMQAPYVLKADGLAAGK----------- 158

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  + +    ++ E+LG           G+    V +E+  D
Sbjct: 159 ---GVIIAPTAEEAKRELAEMLGGKF--------GAASRRVVIEEFLD 195


>gi|15903196|ref|NP_358746.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae R6]
 gi|60389779|sp|Q8CWR0|CARB_STRR6 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|15458783|gb|AAK99956.1| Carbamoylphosphate synthase (ammonia), heavy subunit [Streptococcus
           pneumoniae R6]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|68484977|ref|XP_713627.1| likely multifunctional urea amidolyase [Candida albicans SC5314]
 gi|68485048|ref|XP_713590.1| likely multifunctional urea amidolyase [Candida albicans SC5314]
 gi|46435095|gb|EAK94485.1| likely multifunctional urea amidolyase [Candida albicans SC5314]
 gi|46435133|gb|EAK94522.1| likely multifunctional urea amidolyase [Candida albicans SC5314]
          Length = 1813

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  K  VP V    ++     A +    L  P+ V KS    GG G  +      
Sbjct: 730 HSAREIAEKAGVPLVPGSGLVKDAKEARAIAAKLEYPIMV-KSTAGGGGIGLQK------ 782

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S              + V++E   +  R + + +L 
Sbjct: 783 -----VDSEKDIERVFETVQHQGKSYFGD----------SGVFLERFVENARHVEIQMLG 827

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L      +
Sbjct: 828 DGYGNAIAV------GERDCSLQRRNQKIIEETPAPNLPEETRNKMRKAAESLGSSM--K 879

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 880 YKCAGTVEYIYDP-KRDEFYFLEVNA 904


>gi|310640330|ref|YP_003945088.1| phosphoribosylamine-glycine ligase [Paenibacillus polymyxa SC2]
 gi|309245280|gb|ADO54847.1| Phosphoribosylamine-glycine ligase [Paenibacillus polymyxa SC2]
          Length = 421

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KY +P A      +   A + +K  P P+ V+K+   A G+              
Sbjct: 107 KDLLHKYQIPTATYRKFYTYEEAHAYLKEQPIPV-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  S++     + +I    ++ K  G  G+    V +E+         LS + D  +
Sbjct: 152 GVTVAYSMEEAEKALSDI----MVAKVFGEAGA---QVVIEEFLAGQEMSILSFV-DGET 203

Query: 129 GMVAFIA 135
                 A
Sbjct: 204 VRPMAAA 210


>gi|301107684|ref|XP_002902924.1| propionyl coenzyme A carboxylase (Pi-PCC1) [Phytophthora infestans
           T30-4]
 gi|262098042|gb|EEY56094.1| propionyl coenzyme A carboxylase (Pi-PCC1) [Phytophthora infestans
           T30-4]
          Length = 764

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 58/176 (32%), Gaps = 28/176 (15%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L     V    G +  I +   A      +  P+ +  S                 
Sbjct: 150 ESKQLAMDAGVNTIPGFLGEIDTPDEAVKVAHEIGYPVMIKAS---------------AG 194

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+RV  + + V       +G  L  ++   +    + +++E   +  R + + L+ 
Sbjct: 195 GGGKGMRVAYNDEEVR------MGYRLSKEEAASSFGD-DRMFLEKFIEDPRHIEIQLIA 247

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLEL 179
           D        +A  +    I+   +   ++   +L+DP   +   +  A L   +  
Sbjct: 248 DSHGN---VVALPERECSIQRRNQKVVEEAPSVLLDPETRLAMGKQAAMLARKVGY 300


>gi|254973881|ref|ZP_05270353.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-66c26]
 gi|255091266|ref|ZP_05320744.1| phosphoribosylamine--glycine ligase [Clostridium difficile CIP
           107932]
 gi|255312925|ref|ZP_05354508.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-76w55]
 gi|255515684|ref|ZP_05383360.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-97b34]
 gi|255648778|ref|ZP_05395680.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-37x79]
 gi|260681998|ref|YP_003213283.1| phosphoribosylamine--glycine ligase [Clostridium difficile CD196]
 gi|260685596|ref|YP_003216729.1| phosphoribosylamine--glycine ligase [Clostridium difficile R20291]
 gi|306518895|ref|ZP_07405242.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-32g58]
 gi|260208161|emb|CBA60472.1| phosphoribosylamine--glycine ligase [Clostridium difficile CD196]
 gi|260211612|emb|CBE01841.1| phosphoribosylamine--glycine ligase [Clostridium difficile R20291]
          Length = 416

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 26/166 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P AK    +++  A S I +   P+ V+K+   A G+             
Sbjct: 106 SKEFMIKHNIPTAKYKEYTNLEEAISEIDSFGYPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  I+ ++E+    +  K+ G  G   + + +E+    +     S+L    
Sbjct: 152 -GVVIPENREDAIATLKEM----MSDKKFGAAG---DKIVIEEFLKGIE---TSILAFVD 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           +  +  +AS +    +    +  P         P    T E    +
Sbjct: 201 NDTIVPMASAKDHKKVNNY-EQGPNTGGMGTFSPSEIYTEELANKV 245


>gi|115487740|ref|NP_001066357.1| Os12g0197100 [Oryza sativa Japonica Group]
 gi|77553855|gb|ABA96651.1| Phosphoribosylamine-glycine ligase, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
 gi|113648864|dbj|BAF29376.1| Os12g0197100 [Oryza sativa Japonica Group]
 gi|215701285|dbj|BAG92709.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 518

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY++P AK    +    A+  ++    P+ VVK+   A G+              
Sbjct: 192 KKLCDKYHIPTAKYQSFTDPSDAKKYVEEQGAPI-VVKADGLAAGK-------------- 236

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I  +L    +    G  G   + V VE+  +   E+    LVD  +
Sbjct: 237 GVVVAMTLEKAFEAIDSML----VEGSFGSAG---SRVIVEEYLE-GEEVSFFALVDGET 288

Query: 129 GMVA 132
            +  
Sbjct: 289 ALPL 292


>gi|73538423|ref|YP_298790.1| CoA-binding [Ralstonia eutropha JMP134]
 gi|72121760|gb|AAZ63946.1| CoA-binding [Ralstonia eutropha JMP134]
          Length = 712

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 36/234 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L  ++ VP  +   +     AE+A + L G + V+K                     
Sbjct: 499 AKQLFARFGVPGVREQEVGGAVQAEAAARNLGGQV-VLK---------LLSSTITHKSDV 548

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV V  +   +   + ++            TG       V++  +   EL L +   R 
Sbjct: 549 GGVAVGVAPAEIGRRLEKM-----REDVQRHTGHAAERFLVQEMVNGGVELILGM--HRD 601

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-------ELQ 180
           +   A +    GG+  E             L+    G+  ++  ++   L         +
Sbjct: 602 ALGTAILL-GMGGVTAELFQDTT-----MRLLPATGGLARDEALAMIHDLKTWPLLDGFR 655

Query: 181 GQARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISF 228
           G+ + D   L   +       A     ++  EINP+ ++  G+ +R  D     
Sbjct: 656 GRPKADVAALADAIVAFSAMAAAMGTRLAEAEINPIFVLPAGQGVRAADGVAVI 709


>gi|15901135|ref|NP_345739.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae TIGR4]
 gi|111658502|ref|ZP_01409168.1| hypothetical protein SpneT_02000329 [Streptococcus pneumoniae
           TIGR4]
 gi|116516501|ref|YP_816600.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae D39]
 gi|148998914|ref|ZP_01826349.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|225860894|ref|YP_002742403.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298230795|ref|ZP_06964476.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298254285|ref|ZP_06977871.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502728|ref|YP_003724668.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae TCH8431/19A]
 gi|307067923|ref|YP_003876889.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           AP200]
 gi|22095521|sp|Q97QE4|CARB_STRPN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|122278514|sp|Q04K48|CARB_STRP2 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|254813664|sp|C1CR31|CARB_STRZT RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|14972759|gb|AAK75379.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae TIGR4]
 gi|116077077|gb|ABJ54797.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae D39]
 gi|147755224|gb|EDK62276.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|225726462|gb|ACO22313.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238323|gb|ADI69454.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae TCH8431/19A]
 gi|306409460|gb|ADM84887.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           AP200]
 gi|327389510|gb|EGE87855.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA04375]
 gi|332073614|gb|EGI84093.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA17570]
 gi|332200720|gb|EGJ14792.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           pneumoniae GA41317]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|89075363|ref|ZP_01161785.1| phosphoribosylamine--glycine ligase [Photobacterium sp. SKA34]
 gi|89048912|gb|EAR54481.1| phosphoribosylamine--glycine ligase [Photobacterium sp. SKA34]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + +  A + +K    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEIEPALAYLKQKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +     +R++L         G  G RV    +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTEQEAEDAVRDMLA----GNAFGEAGHRV---VIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|228998727|ref|ZP_04158314.1| Pyruvate carboxylase [Bacillus mycoides Rock3-17]
 gi|229006229|ref|ZP_04163915.1| Pyruvate carboxylase [Bacillus mycoides Rock1-4]
 gi|228755070|gb|EEM04429.1| Pyruvate carboxylase [Bacillus mycoides Rock1-4]
 gi|228761195|gb|EEM10154.1| Pyruvate carboxylase [Bacillus mycoides Rock3-17]
          Length = 1148

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 37/203 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           N+PV  G    I+S+   E   K    P+ ++K+ +  GGRG           + G  ++
Sbjct: 133 NIPVIPGSDGPINSLEEVEEFAKKYDYPI-IIKASLGGGGRGM-------RIVRSGDELK 184

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S     S+ +   G+                VYVE   +  + + + +L D    +V  
Sbjct: 185 ESYDRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHL 230

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFP 192
               +    ++   +   +      I P + ++ +    +C+   +L             
Sbjct: 231 Y---ERDCSVQRRHQKVVE------IAPSVSLSDDLRHRICEAAVQLTKNVNYLNAGTVE 281

Query: 193 NLYKAFCDKDMSLLEINPLIIMK 215
            L K     D   +E+NP + ++
Sbjct: 282 FLVK---GDDFYFIEVNPRVQVE 301


>gi|254389992|ref|ZP_05005214.1| phosphoribosylamine-glycine ligase [Streptomyces clavuligerus ATCC
           27064]
 gi|294813918|ref|ZP_06772561.1| Phosphoribosylamine-glycine ligase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442331|ref|ZP_08217065.1| phosphoribosylamine--glycine ligase [Streptomyces clavuligerus ATCC
           27064]
 gi|197703701|gb|EDY49513.1| phosphoribosylamine-glycine ligase [Streptomyces clavuligerus ATCC
           27064]
 gi|294326517|gb|EFG08160.1| Phosphoribosylamine-glycine ligase [Streptomyces clavuligerus ATCC
           27064]
          Length = 416

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V  +    + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAGVPTARSYVCVNPQEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|332528321|ref|ZP_08404321.1| phosphoribosylamine--glycine ligase [Hylemonella gracilis ATCC
           19624]
 gi|332042192|gb|EGI78518.1| phosphoribosylamine--glycine ligase [Hylemonella gracilis ATCC
           19624]
          Length = 434

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A+    S   AA + I  +  P+ VVK+   A G+             
Sbjct: 109 SKAFMKRHGIPTAEYDTFSDPVAAHAYIDEMGAPI-VVKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYV-EDGADI 114
            GV V ++L      +  +L      ++   G     +      E+ + I
Sbjct: 155 -GVVVATTLAEAHEAVDFMLLDNKLGVSHNEGGARVVIEQFLQGEEASFI 203


>gi|325496338|gb|EGC94197.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Escherichia fergusonii ECD227]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIATDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|262276798|ref|ZP_06054591.1| phosphoribosylamine--glycine ligase [alpha proteobacterium HIMB114]
 gi|262223901|gb|EEY74360.1| phosphoribosylamine--glycine ligase [alpha proteobacterium HIMB114]
          Length = 419

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 24/123 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K + +K+++P AK   + S+  AE  +K    P+ VVKS   A G+              
Sbjct: 107 KDMCKKFSIPSAKFCEVRSIQEAEETLKNFQEPI-VVKSDGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  + +  + DI+ IL     T          + V +E+        Y  +   +  
Sbjct: 152 GVTICENKEKALEDIKGILSGKFSTS---------SRVIIEEFLKGEEASYFVITDGKNF 202

Query: 129 GMV 131
             +
Sbjct: 203 KQI 205


>gi|302561741|ref|ZP_07314083.1| carbamoyl-phosphate synthase, large subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302479359|gb|EFL42452.1| carbamoyl-phosphate synthase, large subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 1102

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L++  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLKEAGLPAPKHGTATTFTEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|228992683|ref|ZP_04152609.1| Pyruvate carboxylase [Bacillus pseudomycoides DSM 12442]
 gi|228767015|gb|EEM15652.1| Pyruvate carboxylase [Bacillus pseudomycoides DSM 12442]
          Length = 1148

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 37/203 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           N+PV  G    I+S+   E   K    P+ ++K+ +  GGRG           + G  ++
Sbjct: 133 NIPVIPGSDGPINSLEEVEEFAKKYDYPI-IIKASLGGGGRGM-------RIVRSGDELK 184

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S     S+ +   G+                VYVE   +  + + + +L D    +V  
Sbjct: 185 ESYDRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHL 230

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFP 192
               +    ++   +   +      I P + ++ +    +C+   +L             
Sbjct: 231 Y---ERDCSVQRRHQKVVE------IAPSVSLSDDLRHRICEAAVQLTKNVNYLNAGTVE 281

Query: 193 NLYKAFCDKDMSLLEINPLIIMK 215
            L K     D   +E+NP + ++
Sbjct: 282 FLVK---GDDFYFIEVNPRVQVE 301


>gi|167968435|ref|ZP_02550712.1| carbamoyl phosphate synthase large subunit [Mycobacterium
            tuberculosis H37Ra]
          Length = 1400

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10   ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
             LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 1071 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 1115


>gi|289761543|ref|ZP_06520921.1| carbamoyl-phosphate synthase large subunit (ammonia chain) carB
           [Mycobacterium tuberculosis GM 1503]
 gi|289709049|gb|EFD73065.1| carbamoyl-phosphate synthase large subunit (ammonia chain) carB
           [Mycobacterium tuberculosis GM 1503]
          Length = 782

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 738


>gi|218283802|ref|ZP_03489725.1| hypothetical protein EUBIFOR_02319 [Eubacterium biforme DSM 3989]
 gi|218215608|gb|EEC89146.1| hypothetical protein EUBIFOR_02319 [Eubacterium biforme DSM 3989]
          Length = 1069

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++A   L K N+P  +G    +V  +      +  P+ V  S +  GGR     + + 
Sbjct: 668 HEFEAM--LHKLNIPQPQGETAVTVEESLVIANKIGYPVLVRPSYVL-GGRAM---EIVH 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQ 95
            D +  V + +++K +  D   ++   ++ K+
Sbjct: 722 NDDELRVYMATAVKEISHDAPILVDKYIVGKE 753



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++L+++ N PV + +++ +V  A    K    PL V  +    G
Sbjct: 133 RSLMQEINEPVPESMIVHTVEEAVEFAKREGYPLVVRPAYTLGG 176


>gi|188587054|ref|YP_001918599.1| carbamoyl-phosphate synthase large subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|226700935|sp|B2A170|CARB_NATTJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|179351741|gb|ACB86011.1| carbamoyl-phosphate synthase large subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 1106

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +   KG   +S   A+     L  PL V  S +  G
Sbjct: 707 QLLNKLGIDRPKGKTATSTKEAKEIADELGYPLVVRPSYVLGG 749



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +     P+ +  ++S+V  A+   K +  P+ V  +    G             + G
Sbjct: 133 KTTMNDIGEPIPESKIVSTVDQAKDFAKNIGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    + + +       + S+L           +N + VE      +E+   ++ D+  
Sbjct: 180 GV--AQNEQQLSQIASNGIRSSL-----------INQILVERCVIGWKEVEYEVMRDKKG 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 NCITI 231


>gi|148994086|ref|ZP_01823426.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP9-BS68]
 gi|147927439|gb|EDK78468.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP9-BS68]
          Length = 1058

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 714


>gi|118575319|ref|YP_875062.1| phosphoribosylamine-glycine ligase [Cenarchaeum symbiosum A]
 gi|118193840|gb|ABK76758.1| phosphoribosylamine-glycine ligase [Cenarchaeum symbiosum A]
          Length = 413

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + +  +P A+         A     +L   + VVK+   A G+             
Sbjct: 100 AKEFMARNGIPTAEFASFDEPRKALVYAGSLSYDV-VVKADGLAEGK------------- 145

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S +   S I  +L    +  + G  G     + VE   D +   Y++ L D  
Sbjct: 146 -GVVVCHSKQDAESAIDAML----VDGKFGDAG---RKIIVERRLDGIEASYIA-LCDGD 196

Query: 128 SGMVA 132
           S +  
Sbjct: 197 SAIPM 201


>gi|22095542|sp|Q9ZB63|CARY_BACST RecName: Full=Carbamoyl-phosphate synthase arginine-specific large
           chain; AltName: Full=Carbamoyl-phosphate synthetase
           ammonia chain
 gi|3912935|gb|AAC78719.1| carbamoylphosphate synthetase heavy subunit [Geobacillus
           stearothermophilus]
          Length = 1043

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 66/187 (35%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +++SV  A +  + +  P+ +  +    G             + G
Sbjct: 134 RALMHELGEPVPESEIVTSVEEAVAFAEQIGFPIIIRPAYTLGG-------------TGG 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  ++ + + L  +            ++   +E      +E+   ++ D+++
Sbjct: 181 GI--AENMEQFLALVEKGLNES-----------PIHQCLIERSVAGFKEIEYEVMRDQSN 227

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 228 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRSSAVKIISALGIIG 280

Query: 182 QARIDGG 188
              I   
Sbjct: 281 GCNIQFA 287


>gi|88704579|ref|ZP_01102292.1| Phosphoribosylamine--glycine ligase [Congregibacter litoralis KT71]
 gi|88700900|gb|EAQ98006.1| Phosphoribosylamine--glycine ligase [Congregibacter litoralis KT71]
          Length = 433

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++N+P        +   A  A     G   VVK+   A G+             
Sbjct: 108 SKDFLARHNIPT-AAYATFNEVEAALAYLRSQGAPIVVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + + ++L         G  G RV    +E+      E    ++ D  
Sbjct: 154 -GVIVAETLEQAEAAVIDML----SGNAFGDAGCRV---VIEEFL-AGEEASFIVISDGE 204

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
           + +   +AS+Q    I E  +
Sbjct: 205 TVLP--MASSQDHKRIGEGDR 223


>gi|317060879|ref|ZP_07925364.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. D12]
 gi|313686555|gb|EFS23390.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. D12]
          Length = 413

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 42/212 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++KY V  A+         A +  +    P  VVK+   A G+             
Sbjct: 97  SKAFMKKYGVKTARYESFQKAEQALAYAEKQEYP-LVVKASGLAAGK------------- 142

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL-----SL 122
            GV +  +++     I+EI+               V  V+ E G++++ E +L     S+
Sbjct: 143 -GVIICQNVEEAKKAIQEIM---------------VEKVFQEAGSEVVIEEFLEGVEASI 186

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDV--ASLCDML-- 177
           L    S ++    S +    I E+ +      +  +  +P +     D     + +    
Sbjct: 187 LSITDSNVILPFISAKDHKKIGEKESGLNTGGMGVIAPNPYVTEQVYDAFQKDILEPTLK 246

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEIN 209
            ++ +     G +F  L      K + LLE N
Sbjct: 247 GMKAEGMKFAGIIFFGL--MITKKGVYLLEYN 276


>gi|170767638|ref|ZP_02902091.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           albertii TW07627]
 gi|170123972|gb|EDS92903.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           albertii TW07627]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 77/238 (32%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIANDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P++   + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|329296720|ref|ZP_08254056.1| GCN5-like N-acetyltransferase [Plautia stali symbiont]
          Length = 893

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 31/224 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S   AA +    +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLATLPTWIASDSQAAATIADQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D +G +    S   V      I      T        R++ + V+      +EL +
Sbjct: 530 AHKSDEQGVMLYLRSAAEVEQAADAIFDRVRETHPQA----RIDGLLVQANRAGAQELRV 585

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVASL 173
            +  D   G +  +   +GG++ +      P K   + + PL       + + +     +
Sbjct: 586 VVEHDPLFGPIIMLG--EGGVEWQ------PDKQAAVALPPLNMTLARYLVIQALKSGKV 637

Query: 174 CDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
                L+         L   +     D  ++  L+I+PL+   N
Sbjct: 638 RSRSALRPLDITGLSQLLVQVSNLVVDCPEIQRLDIHPLLASAN 681


>gi|225375971|ref|ZP_03753192.1| hypothetical protein ROSEINA2194_01608 [Roseburia inulinivorans DSM
           16841]
 gi|225212224|gb|EEG94578.1| hypothetical protein ROSEINA2194_01608 [Roseburia inulinivorans DSM
           16841]
          Length = 1068

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P A G  + +   A+     L  P+ V  S +  G   K  F +   +    
Sbjct: 673 EILEKTQIPRAAGGTVFTAEEAKEVANRLGYPVLVRPSYVLGGQGMKIAFNDEEIEEF-- 730

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                     I  I  I     I       G  +    V DG DI
Sbjct: 731 ----------IGIINRIAQDHPILVDKYLQGKEIEVDAVCDGTDI 765


>gi|333015953|gb|EGK35288.1| acetyltransferase family protein [Shigella flexneri K-227]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|333000444|gb|EGK20026.1| acetyltransferase family protein [Shigella flexneri VA-6]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|332766586|gb|EGJ96791.1| acetyltransferase family protein [Shigella flexneri 2930-71]
          Length = 865

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 460 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 508

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 509 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 564

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 565 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 616

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 617 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 673


>gi|324008441|gb|EGB77660.1| CoA binding domain protein [Escherichia coli MS 57-2]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|319900660|ref|YP_004160388.1| phosphoribosylamine--glycine ligase [Bacteroides helcogenes P
           36-108]
 gi|319415691|gb|ADV42802.1| phosphoribosylamine--glycine ligase [Bacteroides helcogenes P
           36-108]
          Length = 424

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 26/130 (20%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++N+P A  K V   ++    + ++TL  P YV+K+     G+           
Sbjct: 110 AKEFMQRHNIPTARYKSVTAQTLDEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  SL+    +++E+LG           G+    V +E+      E  + +L D
Sbjct: 158 ---GVLILPSLEEARKELKEMLGGMF--------GNASATVVIEEFLS-GIECSVFVLSD 205

Query: 126 RTSGMVAFIA 135
                +  +A
Sbjct: 206 SRHYKILPVA 215


>gi|319401503|gb|EFV89713.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Staphylococcus epidermidis FRI909]
          Length = 1057

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LLR+  VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLREIAVPQPQGKTATSPKEALKNAREIGYPVVVRPSYVL-GGRAMEIVDNDQE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|315300560|gb|EFU59789.1| CoA binding domain protein [Escherichia coli MS 16-3]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|331664153|ref|ZP_08365063.1| putative CoA binding domain protein [Escherichia coli TA143]
 gi|331059952|gb|EGI31929.1| putative CoA binding domain protein [Escherichia coli TA143]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|331658729|ref|ZP_08359673.1| putative CoA binding domain protein [Escherichia coli TA206]
 gi|331054394|gb|EGI26421.1| putative CoA binding domain protein [Escherichia coli TA206]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|331648331|ref|ZP_08349420.1| putative CoA binding domain protein [Escherichia coli M605]
 gi|330912352|gb|EGH40862.1| protein acetyltransferase [Escherichia coli AA86]
 gi|331042880|gb|EGI15021.1| putative CoA binding domain protein [Escherichia coli M605]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCSEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|301307259|ref|ZP_07213277.1| acetyltransferase, GNAT family [Escherichia coli MS 124-1]
 gi|300837552|gb|EFK65312.1| acetyltransferase, GNAT family [Escherichia coli MS 124-1]
          Length = 830

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 425 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 473

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 474 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 529

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 530 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 581

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 582 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 638


>gi|300920752|ref|ZP_07137158.1| CoA binding domain protein [Escherichia coli MS 115-1]
 gi|300412323|gb|EFJ95633.1| CoA binding domain protein [Escherichia coli MS 115-1]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|301021929|ref|ZP_07185888.1| CoA binding domain protein [Escherichia coli MS 196-1]
 gi|299881396|gb|EFI89607.1| CoA binding domain protein [Escherichia coli MS 196-1]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|281179633|dbj|BAI55963.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|260856678|ref|YP_003230569.1| fused putative acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O26:H11
           str. 11368]
 gi|260869270|ref|YP_003235672.1| fused putative acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O111:H-
           str. 11128]
 gi|257755327|dbj|BAI26829.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O26:H11
           str. 11368]
 gi|257765626|dbj|BAI37121.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O111:H-
           str. 11128]
 gi|323156244|gb|EFZ42403.1| acetyltransferase family protein [Escherichia coli EPECa14]
 gi|323177285|gb|EFZ62873.1| acetyltransferase family protein [Escherichia coli 1180]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|222034289|emb|CAP77030.1| Uncharacterized protein yfiQ [Escherichia coli LF82]
 gi|312947156|gb|ADR27983.1| hypothetical protein NRG857_12835 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|218555168|ref|YP_002388081.1| acyl-CoA synthetase NAD(P)-binding/ATP-binding subunit [Escherichia
           coli IAI1]
 gi|218696213|ref|YP_002403880.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli 55989]
 gi|218352945|emb|CAU98744.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli 55989]
 gi|218361936|emb|CAQ99537.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli IAI1]
 gi|320200148|gb|EFW74737.1| Protein acetyltransferase [Escherichia coli EC4100B]
 gi|324118206|gb|EGC12102.1| acetyltransferase [Escherichia coli E1167]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|123967609|ref|YP_001008467.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. AS9601]
 gi|123197719|gb|ABM69360.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. AS9601]
          Length = 449

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 89/277 (32%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +    VP   G   ++S+V  A      +  P+ ++K+    GGRG  R  E   +
Sbjct: 119 AKETMEAVGVPTVPGSKGLLSNVDEAYKLADDIGYPV-IIKATAGGGGRGM-RLVENSNN 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +   +                         G  G     +Y+E      R + + +L D
Sbjct: 177 LEKMFKAAQGEAEAA---------------FGNDG-----LYMEKFIKKPRHVEIQILAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           R+      +   +    ++   +   ++     I+P +         +    +  +G   
Sbjct: 217 RSGN---VVHLGERDCSVQRRHQKLLEESPSPAINPALRKKMGNAAIAAAKSIGYEGAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D   N Y  F + +  +   +P+  M  G  L     KI+   N  +   DI   
Sbjct: 274 VEFLVDDDDNFY--FMEMNTRIQVEHPVTEMVTGVDLIAEQIKIASGANLEFSQDDIHLN 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
                     I A+  + ++    G I       G G
Sbjct: 332 ---GHAIECRINAEDPSHNFRPSPGKITGWLPPGGPG 365


>gi|110806528|ref|YP_690048.1| hypothetical protein SFV_2647 [Shigella flexneri 5 str. 8401]
 gi|110616076|gb|ABF04743.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|108800168|ref|YP_640365.1| carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Mycobacterium sp. MCS]
 gi|119869296|ref|YP_939248.1| carbamoyl-phosphate synthase L chain, ATP-binding [Mycobacterium
           sp. KMS]
 gi|126435791|ref|YP_001071482.1| carbamoyl-phosphate synthase L chain, ATP-binding [Mycobacterium
           sp. JLS]
 gi|108770587|gb|ABG09309.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Mycobacterium sp. MCS]
 gi|119695385|gb|ABL92458.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Mycobacterium sp. KMS]
 gi|126235591|gb|ABN98991.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Mycobacterium sp. JLS]
          Length = 677

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 17/79 (21%)

Query: 7   QAKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK  +    VPV  G   +  S          +  P+ V K+    GGR          
Sbjct: 120 QAKKTMSDAGVPVLPGGDTTGLSAEQLAKLAADVGYPVLV-KASAGGGGR---------- 168

Query: 65  DSKGGVRVESSLKSVISDI 83
               G+R+ +S   +   +
Sbjct: 169 ----GMRIVASPDELDEAV 183


>gi|77919211|ref|YP_357026.1| carbamoyl-phosphate synthase large subunit [Pelobacter carbinolicus
           DSM 2380]
 gi|77545294|gb|ABA88856.1| carbamoyl-phosphate synthase large subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 1084

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 27/130 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  V V +  +  S   A   I+ +  P  +         R              
Sbjct: 133 KEAMAKIGVAVPRSGLAHSYEEAMKIIEYVGYPAII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +     LG        G   S  + + VE+     +E  L ++ D+ +
Sbjct: 181 ---IAYNREEYEALA---LG--------GIDASPTDEILVEESIIGWKEFELEVMRDK-A 225

Query: 129 GMVAFIASTQ 138
             V  I S +
Sbjct: 226 DNVVIICSIE 235


>gi|74313147|ref|YP_311566.1| hypothetical protein SSON_2710 [Shigella sonnei Ss046]
 gi|73856624|gb|AAZ89331.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323167777|gb|EFZ53472.1| acetyltransferase family protein [Shigella sonnei 53G]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|24113925|ref|NP_708435.1| hypothetical protein SF2646 [Shigella flexneri 2a str. 301]
 gi|30063985|ref|NP_838156.1| hypothetical protein S2819 [Shigella flexneri 2a str. 2457T]
 gi|24053028|gb|AAN44142.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042241|gb|AAP17966.1| hypothetical protein S2819 [Shigella flexneri 2a str. 2457T]
 gi|281601996|gb|ADA74980.1| putative Acyl-CoA synthetase (NDP forming) [Shigella flexneri
           2002017]
 gi|313648263|gb|EFS12707.1| acetyltransferase, GNAT family [Shigella flexneri 2a str. 2457T]
 gi|332753994|gb|EGJ84368.1| acetyltransferase family protein [Shigella flexneri 4343-70]
 gi|332755832|gb|EGJ86190.1| acetyltransferase family protein [Shigella flexneri 2747-71]
 gi|332761978|gb|EGJ92251.1| acetyltransferase family protein [Shigella flexneri K-671]
 gi|333000855|gb|EGK20427.1| acetyltransferase family protein [Shigella flexneri K-218]
 gi|333001677|gb|EGK21244.1| acetyltransferase family protein [Shigella flexneri K-272]
 gi|333016835|gb|EGK36161.1| acetyltransferase family protein [Shigella flexneri K-304]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|16330918|ref|NP_441646.1| phosphoribosylamine--glycine ligase [Synechocystis sp. PCC 6803]
 gi|3024481|sp|P74232|PUR2_SYNY3 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|1653412|dbj|BAA18326.1| glycinamide ribonucleotide synthetase [Synechocystis sp. PCC 6803]
          Length = 419

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 17/105 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  VP A G   +    A++    +  P+ VVK+   A G+              
Sbjct: 109 KQLLIEAGVPTAFGETFTEPAPAQAYATKMGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDG 111
           GV V  +     + I E+   G   I  +    G  V+ + + DG
Sbjct: 154 GVIVAQTSAEATTAIAELFDQGFEKIVVEEFLPGEEVSVLALCDG 198


>gi|193064096|ref|ZP_03045181.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli E22]
 gi|192929331|gb|EDV82940.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli E22]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|157157254|ref|YP_001463908.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Escherichia coli E24377A]
 gi|191167989|ref|ZP_03029791.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli B7A]
 gi|193068407|ref|ZP_03049370.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli E110019]
 gi|194429281|ref|ZP_03061808.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli B171]
 gi|256017266|ref|ZP_05431131.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Shigella sp. D9]
 gi|260845270|ref|YP_003223048.1| fused putative acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O103:H2
           str. 12009]
 gi|300904232|ref|ZP_07122091.1| CoA binding domain protein [Escherichia coli MS 84-1]
 gi|300927039|ref|ZP_07142791.1| CoA binding domain protein [Escherichia coli MS 182-1]
 gi|301330314|ref|ZP_07222961.1| CoA binding domain protein [Escherichia coli MS 78-1]
 gi|307313845|ref|ZP_07593461.1| GCN5-related N-acetyltransferase [Escherichia coli W]
 gi|309794361|ref|ZP_07688784.1| CoA binding domain protein [Escherichia coli MS 145-7]
 gi|332278258|ref|ZP_08390671.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Shigella sp. D9]
 gi|157079284|gb|ABV18992.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli E24377A]
 gi|190901996|gb|EDV61743.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli B7A]
 gi|192958359|gb|EDV88799.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli E110019]
 gi|194412689|gb|EDX28984.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli B171]
 gi|257760417|dbj|BAI31914.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O103:H2
           str. 12009]
 gi|300403765|gb|EFJ87303.1| CoA binding domain protein [Escherichia coli MS 84-1]
 gi|300416923|gb|EFK00234.1| CoA binding domain protein [Escherichia coli MS 182-1]
 gi|300843648|gb|EFK71408.1| CoA binding domain protein [Escherichia coli MS 78-1]
 gi|306906346|gb|EFN36861.1| GCN5-related N-acetyltransferase [Escherichia coli W]
 gi|308121817|gb|EFO59079.1| CoA binding domain protein [Escherichia coli MS 145-7]
 gi|315061903|gb|ADT76230.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli W]
 gi|315256612|gb|EFU36580.1| CoA binding domain protein [Escherichia coli MS 85-1]
 gi|323159157|gb|EFZ45148.1| acetyltransferase family protein [Escherichia coli E128010]
 gi|323377516|gb|ADX49784.1| GCN5-related N-acetyltransferase [Escherichia coli KO11]
 gi|332100610|gb|EGJ03956.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Shigella sp. D9]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|16130509|ref|NP_417079.1| inhibiting acetyltransferase for acetyl-CoA synthetase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|89109390|ref|AP_003170.1| fused predicted acyl-CoA synthetase NAD(P)-binding subunit and
           ATP-binding subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|157162064|ref|YP_001459382.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Escherichia coli HS]
 gi|170082193|ref|YP_001731513.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding
           subunit [Escherichia coli str. K-12 substr. DH10B]
 gi|238901749|ref|YP_002927545.1| fused putative acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli BW2952]
 gi|256021729|ref|ZP_05435594.1| fused putative acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia sp. 4_1_40B]
 gi|300951695|ref|ZP_07165515.1| CoA binding domain protein [Escherichia coli MS 116-1]
 gi|300958773|ref|ZP_07170886.1| CoA binding domain protein [Escherichia coli MS 175-1]
 gi|301648349|ref|ZP_07248089.1| CoA binding domain protein [Escherichia coli MS 146-1]
 gi|307139222|ref|ZP_07498578.1| fused putative acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli H736]
 gi|312973170|ref|ZP_07787342.1| acetyltransferase family protein [Escherichia coli 1827-70]
 gi|331643208|ref|ZP_08344343.1| putative CoA binding domain protein [Escherichia coli H736]
 gi|2495644|sp|P76594|YFIQ_ECOLI RecName: Full=Uncharacterized protein yfiQ
 gi|1788938|gb|AAC75637.1| inhibiting acetyltransferase for acetyl-CoA synthetase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|85675472|dbj|BAE76754.1| fused predicted acyl-CoA synthetase NAD(P)-binding subunit and
           ATP-binding subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|157067744|gb|ABV06999.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli HS]
 gi|169890028|gb|ACB03735.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit;
           ATP-binding subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238861220|gb|ACR63218.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli BW2952]
 gi|260448336|gb|ACX38758.1| GCN5-related N-acetyltransferase [Escherichia coli DH1]
 gi|300314581|gb|EFJ64365.1| CoA binding domain protein [Escherichia coli MS 175-1]
 gi|300449057|gb|EFK12677.1| CoA binding domain protein [Escherichia coli MS 116-1]
 gi|301073625|gb|EFK88431.1| CoA binding domain protein [Escherichia coli MS 146-1]
 gi|309702970|emb|CBJ02301.1| putative acyl-CoA synthetase [Escherichia coli ETEC H10407]
 gi|310331765|gb|EFP99000.1| acetyltransferase family protein [Escherichia coli 1827-70]
 gi|315137208|dbj|BAJ44367.1| fused putative acyl-CoA synthetase:NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli DH1]
 gi|315615846|gb|EFU96478.1| acetyltransferase family protein [Escherichia coli 3431]
 gi|323936324|gb|EGB32615.1| acetyltransferase [Escherichia coli E1520]
 gi|331040006|gb|EGI12226.1| putative CoA binding domain protein [Escherichia coli H736]
 gi|332344459|gb|AEE57793.1| acetyltransferase [Escherichia coli UMNK88]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|329938930|ref|ZP_08288304.1| carbamoyl phosphate synthase large subunit [Streptomyces
           griseoaurantiacus M045]
 gi|329301815|gb|EGG45708.1| carbamoyl phosphate synthase large subunit [Streptomyces
           griseoaurantiacus M045]
          Length = 1102

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|303241836|ref|ZP_07328331.1| phosphoribosylamine/glycine ligase [Acetivibrio cellulolyticus CD2]
 gi|302590611|gb|EFL60364.1| phosphoribosylamine/glycine ligase [Acetivibrio cellulolyticus CD2]
          Length = 419

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KYN+P AK  V      A   +KT   P  V+K+   A G+             
Sbjct: 106 AKDLMKKYNIPTAKYEVFDKSSDALEYLKTQKFPT-VIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  +++     +  I    +  K  G  G   N V +E+  
Sbjct: 152 -GVIIAQNIEEANEAVVNI----MEDKAFGEAG---NKVVIEEFM 188


>gi|257463299|ref|ZP_05627697.1| phosphoribosylamine--glycine ligase [Fusobacterium sp. D12]
          Length = 408

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 42/212 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++KY V  A+         A +  +    P  VVK+   A G+             
Sbjct: 92  SKAFMKKYGVKTARYESFQKAEQALAYAEKQEYP-LVVKASGLAAGK------------- 137

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL-----SL 122
            GV +  +++     I+EI+               V  V+ E G++++ E +L     S+
Sbjct: 138 -GVIICQNVEEAKKAIQEIM---------------VEKVFQEAGSEVVIEEFLEGVEASI 181

Query: 123 LVDRTSGMVAFIASTQGGMDI-EEVAKDYPQKIFKLLIDPLIGVTSEDV--ASLCDML-- 177
           L    S ++    S +    I E+ +      +  +  +P +     D     + +    
Sbjct: 182 LSITDSNVILPFISAKDHKKIGEKESGLNTGGMGVIAPNPYVTEQVYDAFQKDILEPTLK 241

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEIN 209
            ++ +     G +F  L      K + LLE N
Sbjct: 242 GMKAEGMKFAGIIFFGL--MITKKGVYLLEYN 271


>gi|149054227|gb|EDM06044.1| ATP citrate lyase, isoform CRA_c [Rattus norvegicus]
          Length = 202

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 17/120 (14%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK             V V  SL  V S ++  LG        
Sbjct: 49  WLLSQSLVVKPDQLIKRRGKLGL----------VGVNLSLDGVKSWLKPRLGHE---ATV 95

Query: 97  GPTGSRVNCVYVEDGADI--LRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
           G     +    +E         E Y+ +   R    V F    +GG+D+ +V     + +
Sbjct: 96  GKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLF--HHEGGVDVGDVDTKAQKLL 153


>gi|2384736|gb|AAB69865.1| PthN [Xanthomonas campestris]
          Length = 1026

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 111/418 (26%), Gaps = 97/418 (23%)

Query: 27  SVHAAESAIKTLPGPLYV--------VKSQIHAGGRGKGRFKELPADSKGGVRVES---- 74
           +     +    + G   +        V  Q H     +          K  +        
Sbjct: 459 TPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLP 518

Query: 75  --------SLKSVISDIREILGS-------TLITKQTGPTGSRVNCVYV-------EDGA 112
                   +   V++    I G         L+       G     V         +   
Sbjct: 519 VLCEQHGLTPDQVVAIASNIGGKQALETVQRLLPVLCEQHGLTPEQVVAIASNNGGKQAL 578

Query: 113 DILRELYLSLLVDRTSGMV---AFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSE 168
           + ++ L L +L             IAS  GG   +E V +  P            G+T +
Sbjct: 579 ETVQRL-LPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQ------AHGLTPD 631

Query: 169 DVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            V ++   +           +    L                L ++        D  ++ 
Sbjct: 632 QVVAIASNIG-----GKQALETVQRL----------------LPVLCQAHGLTPDQVVAI 670

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMD---- 284
             N   R      L  V        E  QH L+   +   +    NG   A+ T+     
Sbjct: 671 ASNGGGRQ----ALETVQRLLPVLCE--QHGLTPDQV---VAIASNGGKQALETVQRLLP 721

Query: 285 -IIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKG-----------ILINIFGGI 332
            + + +G  PA  + +   A  +    A + I +  S              + +   GG 
Sbjct: 722 VLCEQHGLTPAQVVAI---ASNNGGKQALESIFAQLSRPDPAFAALTNDHLVALACLGGR 778

Query: 333 MRCDVLVKGILSA---VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDA 387
              D + KG+  A   +K     IP       A+     R++     +   A   DDA
Sbjct: 779 PALDAVKKGLPHAPTLIKRTNRRIPERTSHRVADHAHVARVLGFFQCHSHPAQAFDDA 836


>gi|56964160|ref|YP_175891.1| pyruvate carboxylase [Bacillus clausii KSM-K16]
 gi|56910403|dbj|BAD64930.1| pyruvate carboxylase [Bacillus clausii KSM-K16]
          Length = 1149

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 76/215 (35%), Gaps = 42/215 (19%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+    K  +PV  G    ++S+   ++       P +++K+ +  GGRG    +E   
Sbjct: 124 QAREQALKAGLPVIPGSDGPVASLEEVQAFADEHGYP-FIIKASLGGGGRGMRIVREEKD 182

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +       S +   S+ +   G+                VYVE   +  + + + +L 
Sbjct: 183 VKE-------SYERAKSEAKSAFGND--------------EVYVEKFVERPKHIEVQILA 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM----LELQ 180
           D+       +   +    ++   +   +      I P + ++ E   ++CD     ++  
Sbjct: 222 DKHGN---IVHLYERDCSVQRRHQKVVE------IAPSVSLSDEVRTNICDAAVNLMKNV 272

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           G       +          D     +E+NP + ++
Sbjct: 273 GYVNAGTVEFLVT-----DDGTFYFIEVNPRVQVE 302


>gi|297563554|ref|YP_003682528.1| phosphoribosylamine/glycine ligase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848002|gb|ADH70022.1| phosphoribosylamine/glycine ligase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 416

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 39/128 (30%), Gaps = 33/128 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP AK  V  +      A+     P YVVK+   A G+             
Sbjct: 106 AKEVMEAAGVPTAKARVCRTASQVSEALDEFGTP-YVVKNDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V           RE                    V +E+  D   E+ L +L D  
Sbjct: 152 -GVVVTEDRALAEQHARE-----------------CGRVVIEEFLD-GPEVSLFVLSDGL 192

Query: 128 SGMVAFIA 135
             +    A
Sbjct: 193 HALPLLPA 200


>gi|182439844|ref|YP_001827563.1| carbamoyl phosphate synthase large subunit [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326780508|ref|ZP_08239773.1| carbamoyl-phosphate synthase, large subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|226700936|sp|B1W463|CARB_STRGG RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|178468360|dbj|BAG22880.1| putative carbamoyl-phosphate synthase large subunit [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326660841|gb|EGE45687.1| carbamoyl-phosphate synthase, large subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 1102

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|291445213|ref|ZP_06584603.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces roseosporus NRRL 15998]
 gi|291348160|gb|EFE75064.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces roseosporus NRRL 15998]
          Length = 398

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 79/276 (28%), Gaps = 70/276 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  ++S    A +  + + G   ++K+ +  G  GK            GV 
Sbjct: 129 LAEIGAPCPRNRIVSDPADAAAFAEEVGGFPVILKT-VRGGYDGK------------GVW 175

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+  D +REL  +++      + 
Sbjct: 176 VVRSEADAADPFR--------------AGVPV---LAEEKVDFVRELAANIVRSPHGQAV 218

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               + S Q     + V    P+         L G   +    +   L++ G   ++   
Sbjct: 219 AYPVVESIQVDGVCDTVIAPAPELDET-----LAGEAQQLALRIAAELDVVGHLAVE--- 270

Query: 190 LFPNLYKAFCDKDMSLLEINPLII--------MKNGRL---RVLDSKISFDDNALYRHLD 238
                   F  +D  +L +N L +         ++G +        +   D         
Sbjct: 271 -------LFETRDGRIL-VNELAMRPHNSGHWTQDGAITSQFANHVRAVLD--------- 313

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL-DGNIGCMV 273
              L D        +        Y  +  G + CM 
Sbjct: 314 -LPLGDPRPRAPWTVMCNVLGGDYPDMYQGYLHCMA 348


>gi|108798269|ref|YP_638466.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium sp. MCS]
 gi|108768688|gb|ABG07410.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Mycobacterium
           sp. MCS]
          Length = 396

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 43/205 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L     P+ +   + +V    +    + GP+ V+K+ +  G  G+            GV 
Sbjct: 106 LEAMGAPIPRYTAVDTVDDVVAFSSEVDGPV-VLKT-VRGGYDGR------------GVV 151

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + +  +         L            G     +  E+  D+ RE  L+ LV R     
Sbjct: 152 LTADAEEARDVAARYL----------ADGVP---ILAEERVDMRRE--LAALVAR----- 191

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDL 190
               S  G G     V       I  +++ P   ++ +  +S    L L+  A +    +
Sbjct: 192 ----SPFGQGAAWPVVETVQRDGICVVVLAPAPELSDDLGSS-AQQLGLKLAAELGVVGV 246

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK 215
                + F   D  LL +N L +  
Sbjct: 247 LA--VELFETVDGRLL-VNELAMRP 268


>gi|121997061|ref|YP_001001848.1| GCN5-like N-acetyltransferase [Halorhodospira halophila SL1]
 gi|121588466|gb|ABM61046.1| GCN5-related N-acetyltransferase [Halorhodospira halophila SL1]
          Length = 882

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 74/248 (29%), Gaps = 54/248 (21%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAES--------AIKTLPGPLYVVKSQIHAGG 53
           +++EYQ   LL  Y +P       +    A +            L  P   +KSQ     
Sbjct: 475 HLNEYQTGRLLSAYGIPCVDSRRANDPEEAAAVAAELNQPVALKLMSPEVQLKSQ----- 529

Query: 54  RGKGRFKELPADSKGGVRVESS-LKSVISDIREILG--STLITKQTGPTGSRVNCVYVED 110
                         G V ++ +  ++V ++   +L     L  +     G  V  +    
Sbjct: 530 -------------AGSVALDLTGPEAVRAEAEAMLARLHELRGEDVAVDGFAVQPMT--- 573

Query: 111 GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
             D   EL L +      G V +     GG + E +A       +   + P   +     
Sbjct: 574 RRDGAFELTLGVRPGGPFGPVLYFG--HGGTETEAIAD------WACGLPP---LNMHLA 622

Query: 171 ASLCDML---------ELQGQARIDGGDLFPNLYKAFCDKDM-SLLEINPLIIMKNGRLR 220
             +              L+             L +   D      L+INPL    +G + 
Sbjct: 623 REIMQRTRIYGLLVDSGLRKPDLDAVALSLVKLSQLVIDFGAIESLDINPLWATGHG-VL 681

Query: 221 VLDSKISF 228
            LD+ +  
Sbjct: 682 ALDAGVGI 689


>gi|310824519|ref|YP_003956877.1| hypothetical protein STAUR_7294 [Stigmatella aurantiaca DW4/3-1]
 gi|309397591|gb|ADO75050.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 387

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            L +K  +P    +  +     ++  + +  P  V+K  +  G
Sbjct: 118 DLFKKAGIPHPDAIPATDAAQVKAFAQRVGYP-LVLKPDVGVG 159


>gi|296165253|ref|ZP_06847800.1| acetyl/propionyl-CoA carboxylase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295899442|gb|EFG78901.1| acetyl/propionyl-CoA carboxylase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 679

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 17/79 (21%)

Query: 7   QAKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK  +    VPV  G   +  S          +  P+ V K+    GGR          
Sbjct: 122 QAKKTMSDAGVPVLPGGDTTGLSAEQLAKLAADVGYPVLV-KASAGGGGR---------- 170

Query: 65  DSKGGVRVESSLKSVISDI 83
               G+R+ +S   +   +
Sbjct: 171 ----GMRIVASPDELDEAV 185


>gi|297562043|ref|YP_003681017.1| carbamoyl-phosphate synthase, large subunit [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296846491|gb|ADH68511.1| carbamoyl-phosphate synthase, large subunit [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 1100

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K     S   A++A   +  P+ V  S +  GGRG
Sbjct: 677 KVLADAGLPAPKYGTAYSFAEAKAAADEIGYPVMVRPSYVL-GGRG 721


>gi|210617103|ref|ZP_03291413.1| hypothetical protein CLONEX_03635 [Clostridium nexile DSM 1787]
 gi|210149492|gb|EEA80501.1| hypothetical protein CLONEX_03635 [Clostridium nexile DSM 1787]
          Length = 1074

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 33/190 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + ++ K ++P+ +  +  +V  A    + +  P+ V  S +  GGRG             
Sbjct: 672 REMMEKLDIPMPESGMAVNVEEALEIAEKIGYPVMVRPSYVL-GGRGM------------ 718

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD-RT 127
                     V+ D   ++G         P       + ++       E     + D   
Sbjct: 719 ---------EVVYDAESMVGYMNAAVGVTPD----RPILIDRFLGHATECEADAISDGTH 765

Query: 128 SGMVAFIASTQ-GGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           + + A +   +  G+   + A   P K I +  +  +   T      + + + ++G   +
Sbjct: 766 AFVPAVMEHIELAGVHSGDSACIIPSKYISEENVKTIKEYT----RRIAEEMHVKGLMNM 821

Query: 186 DGGDLFPNLY 195
                   +Y
Sbjct: 822 QYAIENGKVY 831



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 28/128 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +    L  P+                 +        G  +  +
Sbjct: 140 GIEMARSEVAYSVDEALAIADKLGYPVV---------------LRPAYTMGGAGGGLVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           ++ + +     L ++L           V  V VE+      EL L ++  R S       
Sbjct: 185 VEELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDSEGNMITV 231

Query: 136 STQGGMDI 143
                +D 
Sbjct: 232 CFIENIDP 239


>gi|115373271|ref|ZP_01460571.1| hypothetical protein STIAU_6026 [Stigmatella aurantiaca DW4/3-1]
 gi|115369717|gb|EAU68652.1| hypothetical protein STIAU_6026 [Stigmatella aurantiaca DW4/3-1]
          Length = 502

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            L +K  +P    +  +     ++  + +  P  V+K  +  G
Sbjct: 233 DLFKKAGIPHPDAIPATDAAQVKAFAQRVGYP-LVLKPDVGVG 274


>gi|311694136|gb|ADP97009.1| phosphoribosylglycinamide formyltransferase 2 [marine bacterium
           HP15]
          Length = 396

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 31/167 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      +     +A+  +  P  VVK  + + G+G+             V+ E  
Sbjct: 129 GLPTSPYRFAGTREEYLAAVNEIGLP-LVVKPVMSSSGKGQST-----------VKTEDD 176

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA-FI 134
           +++     +        +      G     V VE   D   E+ L  +  R        I
Sbjct: 177 IEAAWEYAQ--------SGGRAGKG----RVIVEGFVDFDYEITLLTVKHRDGVSFCEPI 224

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
              Q   D  E  +  P              ++E   ++ + L   G
Sbjct: 225 GHRQEDGDYRESWQPQPMA------PLAYERSAEVARAVVENLGGYG 265


>gi|304386350|ref|ZP_07368683.1| carbamoyl-phosphate synthase, large subunit [Pediococcus
           acidilactici DSM 20284]
 gi|304327707|gb|EFL94934.1| carbamoyl-phosphate synthase, large subunit [Pediococcus
           acidilactici DSM 20284]
          Length = 1057

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 43/214 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           ++L+++   PV    + ++V  A    K    P+ V             R       + G
Sbjct: 133 RSLMKELGEPVPDSAIATTVAEAVDFAKQSGFPVIV-------------RPAFTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   +    +        G TL           V  V +E     ++E+   ++  R  
Sbjct: 180 GI--VNDETELRKIAAN--GLTLS---------PVTQVLIEQSIAGMKEIEFEVM--RDH 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
              A +       D   V       I    +    D  +    +    +   L+++G   
Sbjct: 225 ADNAIVVCNMENFDP--VGIHTGDSIVYAPVQTLSDREVQELRDAALLIIRALKIEGGCN 282

Query: 185 IDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +    D   N Y         ++E+NP +   + 
Sbjct: 283 VQFALDPVQNRY--------YVIEVNPRVSRSSA 308


>gi|299820865|ref|ZP_07052754.1| glutathione synthase [Listeria grayi DSM 20601]
 gi|299817886|gb|EFI85121.1| glutathione synthase [Listeria grayi DSM 20601]
          Length = 782

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL--PADS 66
           K +L K+ + V  G   + +  A+SA     G   VVK +    G G   FK+     D 
Sbjct: 522 KKILAKHGMNVPFGENFTDIETAQSAYPLFTGKAIVVKPKSTNYGWGISIFKDAFTEKDF 581

Query: 67  KGGVRVESSLKSVI 80
           +  +++  S    +
Sbjct: 582 QEALKIAFSYDEAV 595


>gi|325570617|ref|ZP_08146343.1| phosphoribosylamine-glycine ligase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156463|gb|EGC68643.1| phosphoribosylamine-glycine ligase [Enterococcus casseliflavus ATCC
           12755]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+R  ++P A     +    A++ I+    P+ V+K+   A G+             
Sbjct: 107 AKELMRTNHIPTADYQSFTDSAQAKAYIQRKGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   + +  +L         G +G+    V +E+      E  L   V   
Sbjct: 153 -GVVVAETIEEANAAVEAMLEQ----NAFGESGA---KVVIEEFL-AGEEFSLLAFVKGE 203

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 204 AVYPMVIA 211


>gi|224368591|ref|YP_002602754.1| putative carbamoylphosphate synthase, large subunit
           [Desulfobacterium autotrophicum HRM2]
 gi|223691307|gb|ACN14590.1| putative carbamoylphosphate synthase, large subunit
           [Desulfobacterium autotrophicum HRM2]
          Length = 385

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY 43
           K + R+  + VA G V+ ++  AE  +K    P+ 
Sbjct: 117 KEVFRRAGIKVAPGKVVHTLADAEGVVKETGYPVV 151


>gi|169629152|ref|YP_001702801.1| acetyl/propionyl carboxylase alpha subunit AccA2 [Mycobacterium
           abscessus ATCC 19977]
 gi|169241119|emb|CAM62147.1| Probable acetyl/propionyl carboxylase alpha subunit AccA2
           [Mycobacterium abscessus]
          Length = 679

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 17/79 (21%)

Query: 7   QAKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK  +    VPV  G   +  S          +  P+ V K+    GGR          
Sbjct: 122 QAKKTMSDAGVPVLPGGDTTGLSAEQLAKLAADVGYPVLV-KASAGGGGR---------- 170

Query: 65  DSKGGVRVESSLKSVISDI 83
               G+R+ +S   +   +
Sbjct: 171 ----GMRIVASPDELDEAV 185


>gi|163815426|ref|ZP_02206799.1| hypothetical protein COPEUT_01589 [Coprococcus eutactus ATCC 27759]
 gi|158449063|gb|EDP26058.1| hypothetical protein COPEUT_01589 [Coprococcus eutactus ATCC 27759]
          Length = 423

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 24/116 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A     +   +A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYENFTDPDSAIKYLETATFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV + + L+   + ++EI+        G+T++ ++   TG  V+ +   DG  I 
Sbjct: 152 -GVLICNDLEEAKAGVKEIMLDKHFGSAGNTMVIEEFM-TGREVSVLCFCDGTTIK 205


>gi|121594259|ref|YP_986155.1| phosphoribosylamine--glycine ligase [Acidovorax sp. JS42]
 gi|120606339|gb|ABM42079.1| phosphoribosylamine--glycine ligase [Acidovorax sp. JS42]
          Length = 428

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 15/96 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A+    +   AA + +  L  P+ V+K+   A G+             
Sbjct: 106 SKAFMKRHGIPTAEYETFTDPQAAHAYVDRLGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L+     +  +L            G+RV
Sbjct: 152 -GVVVAMTLQEAHDAVDFMLVDNKYGVAHNEGGARV 186


>gi|13022193|gb|AAK11684.1|AF342826_6 YahF/FdrA-like protein [Enterobacter cloacae]
 gi|12644699|gb|AAK00490.1| YahF/FdrA-like protein [Acidovorax citrulli]
          Length = 514

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 16/141 (11%)

Query: 259 NLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGADQDKVAAAFK 313
             +     G IG +      A     +I   G   +        D+           A K
Sbjct: 185 GFANAVRRGRIGVIAASGTGAQEVTSLIHELGSGISQAFGTGGRDLSSAVKGRMARFALK 244

Query: 314 IITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE 373
            +  D     I++           +   IL   K    + P+V+   G +    ++++ +
Sbjct: 245 ALLDDDMTDVIVLI---SKPPAPEVAASILDTAK--GTSKPIVVCFLGGD----SKMVRD 295

Query: 374 SGLNVITAIDLDDAAQKIVHA 394
            GL  I A  L+DAA++ V A
Sbjct: 296 HGL--IPAETLEDAARQAVRA 314


>gi|322368205|ref|ZP_08042774.1| rimK family protein [Haladaptatus paucihalophilus DX253]
 gi|320552221|gb|EFW93866.1| rimK family protein [Haladaptatus paucihalophilus DX253]
          Length = 286

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VP  +  V  +  +A  AI++   P  V+K  + + GR   +             
Sbjct: 97  LAGAGVPTPETKVAFTTDSAMEAIESFGYPC-VLKPVVGSWGRLMAKIDS---------- 145

Query: 72  VESSLKSVISDIREILGS 89
              S    I + +  LG 
Sbjct: 146 --RSAAEAILEHKATLGH 161


>gi|238759748|ref|ZP_04620907.1| hypothetical protein yaldo0001_7610 [Yersinia aldovae ATCC 35236]
 gi|238702074|gb|EEP94632.1| hypothetical protein yaldo0001_7610 [Yersinia aldovae ATCC 35236]
          Length = 880

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 76/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSTLPTWIASDSAEAVHIAEQLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        RV  + V+  A+    +EL
Sbjct: 530 VHKSEVQGVMLYLRTAMEVQRAADDILDRVKRTFPQA----RVQGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGVEW---HHETQAAVALPPLNMALARYLILQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGALQPLDIPGLSHLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|195116114|ref|XP_002002601.1| GI11847 [Drosophila mojavensis]
 gi|193913176|gb|EDW12043.1| GI11847 [Drosophila mojavensis]
          Length = 1353

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 14/83 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    + V+ A+  I++ P    VVK+   A G+             
Sbjct: 114 AKDFMLRHGIPTARYESFTDVNKAKKFIRSAPYAALVVKAAGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V ++++     + EILG  
Sbjct: 161 -GVVVAANVEEACQAVDEILGQL 182


>gi|110639650|ref|YP_679861.1| carbamoyl-phosphate synthase large subunit [Cytophaga hutchinsonii
           ATCC 33406]
 gi|110282331|gb|ABG60517.1| carbamoyl-phosphate synthase large subunit [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 937

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 27/178 (15%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ N+P  +  VI +   A +  K L  PL V  S +  G                 +
Sbjct: 677 LLKEINIPYPEFGVIENADEAVAISKKLNFPLLVRPSYVLGG---------------QSM 721

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
           ++  + + +   +  +L                N V V+   +   E     + D  +  
Sbjct: 722 KIVINEQELEQHVVNLL-----------KDHPGNQVLVDHFLENAIEAEADAICDGENVH 770

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
           +  I        I           F L  D +  +  E    +   L+  G   I   
Sbjct: 771 IIGIMEHIEPAGIHSGDSHSVLPPFDLSDDVIRQI-EEHTKKIAIALKTVGLINIQFA 827


>gi|332976369|gb|EGK13221.1| carbamoyl-phosphate synthase, large subunit [Desmospora sp. 8437]
          Length = 1073

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P   G  ++S  AA SA + L  P+ V  S +  G
Sbjct: 673 RLLGEVGIPQPPGTAVTSGEAALSAARELGFPVLVRPSYVLGG 715



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           Q ++L+R+   PV +  ++ SV  A    +    P+ V  +    G
Sbjct: 131 QFRSLMREIGEPVPESEIVHSVEEAVRFAERTGYPVIVRPAYTLGG 176


>gi|332686813|ref|YP_004456587.1| phosphoribosylamine--glycine ligase [Melissococcus plutonius ATCC
           35311]
 gi|332370822|dbj|BAK21778.1| phosphoribosylamine--glycine ligase [Melissococcus plutonius ATCC
           35311]
          Length = 430

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KYN+P A   + + V  A    K    P+ + K  + A                
Sbjct: 107 AKQLMNKYNIPTADYQIFTEVEPALEYTKKQSLPIVIKKEGLAAW--------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +    +I+ +L      KQ          + +E+  
Sbjct: 152 KGVIIAETYQQAEQNIKAMLAKNEKEKQAM------KRIIIEEFL 190


>gi|328906360|gb|EGG26135.1| phosphoribosylamine--glycine ligase [Propionibacterium sp. P08]
          Length = 445

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A       V +  +A+     P YVVK    AGG+             
Sbjct: 112 AKEVMVAAGVPTAASRSCDDVDSVSAALDEFGAP-YVVKDDGLAGGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGA 112
            GV V +     ++     LGS   +  +    G  V+   + DG 
Sbjct: 158 -GVVVANDRTEALAHAERCLGSGHRVVIEEYLDGPEVSLFAICDGT 202


>gi|323188301|gb|EFZ73593.1| acetyltransferase family protein [Escherichia coli RN587/1]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPSDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|320526846|ref|ZP_08028036.1| phosphoribosylamine--glycine ligase [Solobacterium moorei F0204]
 gi|320132814|gb|EFW25354.1| phosphoribosylamine--glycine ligase [Solobacterium moorei F0204]
          Length = 424

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A   V S    A   I+T      V+K+   A G+             
Sbjct: 106 AKNLMQKYQIPTAAYAVFSDAQEAIHYIRTENRYPTVLKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +  +  + E+    ++ +  G  G     + +E+  
Sbjct: 153 -GVLIAQTEEEAVQAVNEL----MVDQAFGQAGK---QIVIEEFM 189


>gi|315174778|gb|EFU18795.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX1346]
          Length = 415

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFQRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|302878822|ref|YP_003847386.1| cyanophycin synthetase [Gallionella capsiferriformans ES-2]
 gi|302581611|gb|ADL55622.1| cyanophycin synthetase [Gallionella capsiferriformans ES-2]
          Length = 856

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV +G  ++ +  A  A+  + GP+ VVK     G +GKG    +      
Sbjct: 209 KKLLEAAGVPVPQGRPVADIEDAWVAMCEIAGPV-VVKP--LDGNQGKGVTVNIVTRE-- 263

Query: 69  GVRVESSLKSVISDIREILGSTLI 92
              +E +  +      E+L    I
Sbjct: 264 --HLEIAYAAAAKISSEVLLERFI 285


>gi|320011928|gb|ADW06778.1| carbamoyl-phosphate synthase, large subunit [Streptomyces
           flavogriseus ATCC 33331]
          Length = 1102

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|257092429|ref|YP_003166070.1| phosphoribosylamine--glycine ligase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044953|gb|ACV34141.1| phosphoribosylamine/glycine ligase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 426

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 21/136 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++N+P A+    +   +A + I     P+ V+K+   A G+             
Sbjct: 106 AKRFMARHNIPTARFATFAERASAHAYIDRHGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SLK   + I  +L    +    GP G+ V  V +E+  +   E    ++VD  
Sbjct: 152 -GVVVAMSLKEAHAAIDTMLPEKCV---AGPGGTTVARVVIEEYLE-GEEASFIVMVDGK 206

Query: 128 SGMVAFIASTQGGMDI 143
           + +   +AS+Q    I
Sbjct: 207 NVLP--LASSQDHKRI 220


>gi|239939923|ref|ZP_04691860.1| carbamoyl phosphate synthase large subunit [Streptomyces
           roseosporus NRRL 15998]
 gi|239986408|ref|ZP_04707072.1| carbamoyl phosphate synthase large subunit [Streptomyces
           roseosporus NRRL 11379]
 gi|291443354|ref|ZP_06582744.1| carbamoyl-phosphate synthase large chain [Streptomyces roseosporus
           NRRL 15998]
 gi|291346301|gb|EFE73205.1| carbamoyl-phosphate synthase large chain [Streptomyces roseosporus
           NRRL 15998]
          Length = 1102

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|255656184|ref|ZP_05401593.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-23m63]
 gi|296450382|ref|ZP_06892139.1| probable acetyl-CoA synthetase [Clostridium difficile NAP08]
 gi|296878794|ref|ZP_06902795.1| probable acetyl-CoA synthetase [Clostridium difficile NAP07]
 gi|296260792|gb|EFH07630.1| probable acetyl-CoA synthetase [Clostridium difficile NAP08]
 gi|296430222|gb|EFH16068.1| probable acetyl-CoA synthetase [Clostridium difficile NAP07]
          Length = 699

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++KY VPV       S+   +  +K +  P+ V+K                 +D  G   
Sbjct: 492 MKKYGVPVPGQGNAKSIDELDEILKYIKYPV-VLKI--------NSSEILHKSDVGGVKI 542

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +    +    EIL       +     + ++ + V++  +   E+ + +  D   G +
Sbjct: 543 GIKNRDEAVDAYNEIL----TNVKKAKPDANIDGILVQEMVESGIEIIIGITNDDQFGPM 598

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQARIDG 187
             +    GG+ +E         ++ L I+    +          +L      +       
Sbjct: 599 LLVG--LGGVFVEVFKDTT---LYPLPINHDEAIMMLKKLKSFKLLNGYRGSEPCDIDAL 653

Query: 188 GDLFPNLYK-AFCDKD-MSLLEINPLIIMKNGR-LRVLDS 224
            D+   L K A+ +KD +  +++NP+ +   G+ +  +D+
Sbjct: 654 ADMMVKLGKYAYENKDEVKEIDLNPVFVYPKGKGVCAVDA 693


>gi|255949338|ref|XP_002565436.1| Pc22g15180 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592453|emb|CAP98806.1| Pc22g15180 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 668

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           QAK L ++  VPV +      +SV  A +    +  P+ ++K+    GGRG
Sbjct: 125 QAKHLAQQCGVPVLEAMSQPTTSVAEARAFATQVGFPV-MIKAVDGGGGRG 174


>gi|161528803|ref|YP_001582629.1| lysine biosynthesis enzyme LysX [Nitrosopumilus maritimus SCM1]
 gi|160340104|gb|ABX13191.1| lysine biosynthesis enzyme LysX [Nitrosopumilus maritimus SCM1]
          Length = 280

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           LL+K  VP     V  S  AA  A+ T   P  V+K  + + GR
Sbjct: 95  LLKKAGVPTPDATVAFSKDAALEALDTQGYPK-VIKPTVGSWGR 137


>gi|29828959|ref|NP_823593.1| acyl-CoA synthetase (NDP forming type) [Streptomyces avermitilis
           MA-4680]
 gi|29606064|dbj|BAC70128.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
          Length = 949

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL +Y + V + +   +   A  A + +  P+ +  +  H   R       L    +  
Sbjct: 732 ALLSRYGIGVRRALPAPTPDDAAEAARAIGYPVALKATAPHLRHRADLGGVRLDLADEEQ 791

Query: 70  VRVESSLKSVISDIREILGS 89
           +R         +++ E+ G 
Sbjct: 792 LRR------AYAELTEMFGK 805


>gi|315169453|gb|EFU13470.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX1342]
          Length = 415

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|288905687|ref|YP_003430909.1| hypothetical protein GALLO_1494 [Streptococcus gallolyticus UCN34]
 gi|306831783|ref|ZP_07464939.1| ATP-grasp domain protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978717|ref|YP_004288433.1| hypothetical protein SGGBAA2069_c15170 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288732413|emb|CBI13985.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|304425981|gb|EFM29097.1| ATP-grasp domain protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178645|emb|CBZ48689.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 392

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K +  ++ + VA G V  S   A    + L  P+ +
Sbjct: 119 QMKKIFSEHGLKVAAGDVFHSDDEARVLAEKLGFPVII 156


>gi|238918592|ref|YP_002932106.1| hypothetical protein NT01EI_0648 [Edwardsiella ictaluri 93-146]
 gi|238868160|gb|ACR67871.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 890

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 17/144 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   + +L  Y +    G + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHE--VRDILACYGLDTLPGWIANDSTEAVHIAERIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELY 119
              +D +G +    + + V      I       +Q  P    +  +       I  +EL 
Sbjct: 530 AHNSDVQGVMLYLRNAREVEQAANAIFDR---ARQAYPHARILGLLVQSTANRIGAQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDI 143
           + +  D   G +  +   +GG + 
Sbjct: 587 ICVENDAVFGPLILLG--EGGAEW 608


>gi|255307210|ref|ZP_05351381.1| putative acetyl-CoA synthetase [Clostridium difficile ATCC 43255]
          Length = 699

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++KY VPV       S+   +  +K +  P+ V+K                 +D  G   
Sbjct: 492 MKKYGVPVPGQGNAKSIDELDEILKYIKYPV-VLKI--------NSSEILHKSDVGGVKI 542

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +    +    EIL       +     + ++ + V++  +   E+ + +  D   G +
Sbjct: 543 GIENRDEAVDAYNEIL----TNVKKAKPDANIDGILVQEMVESGIEIIIGITNDDQFGPM 598

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQARIDG 187
             +    GG+ +E         ++ L I+    +          +L      +       
Sbjct: 599 LLVG--LGGVFVEVFKDTT---LYPLPINHDEAIMMLKKLKSFKLLNGYRGSEPCDIDAL 653

Query: 188 GDLFPNLYK-AFCDKD-MSLLEINPLIIMKNGR-LRVLDS 224
            D+   L K A+ +KD +  +++NP+ +   G+ +  +D+
Sbjct: 654 ADMMVKLGKYAYENKDEVKEIDLNPVFVYPKGKGVCAVDA 693


>gi|215489337|ref|YP_002331768.1| phosphoribosylamine--glycine ligase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215267409|emb|CAS11860.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O127:H6 str. E2348/69]
          Length = 429

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVRDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|317473238|ref|ZP_07932535.1| carbamoyl-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
 gi|316899333|gb|EFV21350.1| carbamoyl-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
          Length = 1066

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 54/268 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  + +   A SA   L  P+ V  S +  G                G
Sbjct: 674 EILEECCIPRPKGTTVFTCEEALSAAHELGYPVLVRPSYVLGG---------------QG 718

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S + ++S I       +I +QT      ++   V       RE+ +  + D    
Sbjct: 719 MQIAVSDEDIVSFIE------IINRQTQEHPILIDKYLV------GREVEVDAVCDGEE- 765

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVT---SEDVASLCDMLELQGQARI 185
               I        IE         I     I+    V    +E    L   L + G   I
Sbjct: 766 ----IIIPGIMEHIERAGIHSGDSISVYPSINLSEKVKRVIAEYTRKLAKSLNVIGLINI 821

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLI------IMKNGRLRVLDSKISFDDNALYRHLDI 239
                        CD+++ ++E+NP        I K   + ++D        A  R+L+ 
Sbjct: 822 QF---------IVCDEEVYVIEVNPRSSRTVPYISKVTGIPIVDLAAKVIAGAKIRNLEY 872

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDG 267
           +      +E+S     K+   S+  L G
Sbjct: 873 KPGL---QEESEYYAIKKPVFSFEKLRG 897


>gi|310822098|ref|YP_003954456.1| argininosuccinate lyase 2-like protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395170|gb|ADO72629.1| argininosuccinate lyase 2-like protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 417

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A+ALLR   +P  +  VI+S   A    +T+  P  V               K     
Sbjct: 114 HEARALLRAAGLPGPEFHVIASEAEAAQLAQTVRFPCVV---------------KPPAES 158

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN-CVYVEDGAD 113
              GVR   + + +++        +L ++     G  ++  V VE   +
Sbjct: 159 GSTGVRRVDTPEELLAH-----FRSLHSRAANERGQSLHGEVLVESFLE 202


>gi|283783672|ref|YP_003374426.1| D-ala D-ala ligase N-terminal domain protein [Gardnerella vaginalis
           409-05]
 gi|283441575|gb|ADB14041.1| D-ala D-ala ligase N-terminal domain protein [Gardnerella vaginalis
           409-05]
          Length = 380

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 61/216 (28%), Gaps = 23/216 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE-LPA 64
           Y AK L +   + VA G+ + +   A  A          + +Q+ A       F +   A
Sbjct: 147 YYAKQLFKAAGIDVAPGIALDARKFASDAENRFDAYAEEILAQVEAAKLEYPLFVKPSRA 206

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S  GV    S     +    I  ++               V VE G D  RE+  ++L 
Sbjct: 207 GSSFGVTKVESRD-AKALAEAIFEASEHDW----------RVLVEQGID-AREIECAVLA 254

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
            R                  EV  D  +       D          + +     L  +  
Sbjct: 255 ARDGEEPK-------ASWPGEVVLDKREAGEDQFYDFDSKYMDSAASHVEVPANLPAETL 307

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
                       AF   D   L      + K+GR+ 
Sbjct: 308 ERVRKTALA---AFKAADGRGLSRVDSFVTKDGRVI 340


>gi|281354869|ref|ZP_06241363.1| carbamoyl-phosphate synthase, large subunit [Victivallis vadensis
           ATCC BAA-548]
 gi|281317749|gb|EFB01769.1| carbamoyl-phosphate synthase, large subunit [Victivallis vadensis
           ATCC BAA-548]
          Length = 1088

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 56/202 (27%), Gaps = 36/202 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  K  +   +  +  +V  A      +  PL V  S +  GGRG             
Sbjct: 685 KRLSEKIGIRQPESGIAHNVAEAVEIADRIGYPLLVRPSFVL-GGRGM------------ 731

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                     VI      L   +        G     + ++   +   EL +  + D   
Sbjct: 732 ----------VIVYKEAYLRKYVEAAAAVAEGKP---ILIDRFLENAVELDVDCISDGRR 778

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
            ++  I        I             L  +    V +         L + G       
Sbjct: 779 TVIGAILEHVEPAGIHSGDSASVIPPMTLSAEIQEKVRAY-AREFARELHVCG------- 830

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               N+  A  D ++ ++E+NP
Sbjct: 831 --LMNMQLAVKDGEIYMIEVNP 850


>gi|91773323|ref|YP_566015.1| Acyl-CoA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91712338|gb|ABE52265.1| Acetyl-CoA synthetase (ADP-forming), alpha and beta subunits
           [Methanococcoides burtonii DSM 6242]
          Length = 696

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 25/133 (18%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGA-----------------PANFL----DVGGGADQD 306
           NI  + N  GL +   D  +  G +                 PA+ L    DV G A  D
Sbjct: 297 NIAIITNAGGLGILAADACQFAGLSLSSFDESTIEKLRSKLPPASSLYNPVDVLGDARPD 356

Query: 307 KVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMR-LEGANV 364
               A + I  D +V G+++      +     + +  + A K      P++   + G  +
Sbjct: 357 IYGFAIETILDDPNVDGVILLTSPQAMTEIKNIAE--VVAEKCAHTKKPILCSFVGGTRI 414

Query: 365 DIGNRLIAESGLN 377
           + G  ++    + 
Sbjct: 415 EEGEAILNRHHIP 427



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 48/237 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            +LR Y +PV + + + ++     A + +  P+   V+ + I                  
Sbjct: 487 DILRAYGIPVVETLNVKTLQGTLDACENMGYPVVMKVLSADI------------SHKTDV 534

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGVR+   L++     R  L      ++  P  + V+ V V+      +E+ + +  D  
Sbjct: 535 GGVRIG--LENADDVERAYLTMMSDVRRYMPH-AVVSGVQVQKMITGGKEVIIGMNRDVQ 591

Query: 128 SGMVAFIASTQGGMDIE--------------EVAKDYPQKIFKLLI-DPLIGVTSEDVAS 172
            G    +    GG  +E              +V K     I    I   + G +  D+AS
Sbjct: 592 FG-PLLMFGL-GGTYVEVLKDVSFSVAPVGVDVLKKMVSSIRTYPILTGIRGESPSDIAS 649

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-LRVLDSKISF 228
           + D L    Q   D  ++                EINPL+++  G+    +D +++ 
Sbjct: 650 IVDTLCRVSQLVSDFPEILE-------------FEINPLMVLPEGQGCVAMDIRLTL 693


>gi|296102545|ref|YP_003612691.1| putative allophanate hydrolase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057004|gb|ADF61742.1| putative allophanate hydrolase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 1200

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 84/255 (32%), Gaps = 35/255 (13%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL + + VP+ +G  ++++V  A  A   +  P+                 K      
Sbjct: 119 ARALAKAHGVPMLEGTGLLANVDEAVHAAAEVGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV    + +      ++   L        G     V++E   +  R L + L  D 
Sbjct: 164 GIGMRVCYHAEELRDAFDAVV--RLGKNNFSDAG-----VFIEKYIERARHLEVQLFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
              ++A       G+    V +   + + +     L       +      L      R  
Sbjct: 217 KGEVIAL------GVRDCSVQRRNQKVLEETPAPNLPDGMEAALCEAAIKLGQAVNYRS- 269

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG---RLRVLDSKISFDDNALYRHLDIQELR 243
                  +Y +        LE+N  + +++G   ++  +D      D A      + ELR
Sbjct: 270 -AGTVEFVYDS-DAARFYFLEVNTRLQVEHGVTEQVWGVDLVRWMIDLAAGTLPPLAELR 327

Query: 244 DVSEEDSREIEAKQH 258
              +     I+A+ +
Sbjct: 328 ASLQPQGHAIQARVY 342


>gi|218706090|ref|YP_002413609.1| acyl-CoA synthetase NAD(P)-binding/ATP-binding subunit [Escherichia
           coli UMN026]
 gi|293406027|ref|ZP_06650019.1| yfiQ protein [Escherichia coli FVEC1412]
 gi|298381827|ref|ZP_06991426.1| hypothetical protein ECFG_01567 [Escherichia coli FVEC1302]
 gi|300895653|ref|ZP_07114253.1| CoA binding domain protein [Escherichia coli MS 198-1]
 gi|218433187|emb|CAR14085.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli UMN026]
 gi|284922536|emb|CBG35623.1| putative acyl-CoA synthetase [Escherichia coli 042]
 gi|291428235|gb|EFF01262.1| yfiQ protein [Escherichia coli FVEC1412]
 gi|298279269|gb|EFI20783.1| hypothetical protein ECFG_01567 [Escherichia coli FVEC1302]
 gi|300360413|gb|EFJ76283.1| CoA binding domain protein [Escherichia coli MS 198-1]
          Length = 886

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 75/237 (31%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P+    + + PL       + +       
Sbjct: 587 VVVEYDPVFGPLIMLG--EGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|332967873|gb|EGK06969.1| phosphoribosylamine-glycine ligase [Kingella kingae ATCC 23330]
          Length = 423

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + K+N+P A+     +   A   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKHNIPTAQYQTFENAEQAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L       + G  G   + V +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDMLF----GNKMGNAG---SRVVIEDFLT-GEEASFIVMVDGD 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|229818842|ref|YP_002880368.1| protein of unknown function DUF201 [Beutenbergia cavernae DSM
           12333]
 gi|229564755|gb|ACQ78606.1| protein of unknown function DUF201 [Beutenbergia cavernae DSM
           12333]
          Length = 302

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L +  VPV +    S+  +A  A+    GP+ VVK ++  GGRG
Sbjct: 128 LERAGVPVPRFAPASAFGSAGEALDWAGGPV-VVKPRVARGGRG 170


>gi|213163877|ref|ZP_03349587.1| putative acyl-CoA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 467

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 87/271 (32%), Gaps = 39/271 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + +  P+ +         + +    
Sbjct: 62  LDTHEVQ--PILHAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 110

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 111 PHKSEVQGVMLYLRTASEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 167

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 168 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKQRK 219

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---F 228
           +     L+    +    L   +     D  ++  L+I+PL+   +     LD  +    F
Sbjct: 220 IRARSALRPLDIVGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAS-EFTALDVTLDIAPF 278

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQHN 259
           D +   R      +R    +    +E K  +
Sbjct: 279 DGDNESR----LAVRPYPHQLEEWVEMKNGD 305


>gi|167745331|ref|ZP_02417458.1| hypothetical protein ANACAC_00022 [Anaerostipes caccae DSM 14662]
 gi|167655052|gb|EDR99181.1| hypothetical protein ANACAC_00022 [Anaerostipes caccae DSM 14662]
          Length = 1066

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 54/268 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  KG  + +   A SA   L  P+ V  S +  G                G
Sbjct: 674 EILEECCIPRPKGTTVFTCEEALSAAHELGYPVLVRPSYVLGG---------------QG 718

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S + ++S I       +I +QT      ++   V       RE+ +  + D    
Sbjct: 719 MQIAVSDEDIVSFIE------IINRQTQEHPILIDKYLV------GREVEVDAVCDGEE- 765

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVT---SEDVASLCDMLELQGQARI 185
               I        IE         I     I+    V    +E    L   L + G   I
Sbjct: 766 ----IIIPGIMEHIERAGIHSGDSISVYPSINLSEKVKRVIAEYTRKLAKSLNVIGLINI 821

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLI------IMKNGRLRVLDSKISFDDNALYRHLDI 239
                        CD+++ ++E+NP        I K   + ++D        A  R+L+ 
Sbjct: 822 QF---------IVCDEEVYVIEVNPRSSRTVPYISKVTGIPIVDLAAKVIAGAKIRNLEY 872

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDG 267
           +      +E+S     K+   S+  L G
Sbjct: 873 KPGL---QEESEYYAIKKPVFSFEKLRG 897


>gi|26250777|ref|NP_756817.1| phosphoribosylamine--glycine ligase [Escherichia coli CFT073]
 gi|91212789|ref|YP_542775.1| phosphoribosylamine--glycine ligase [Escherichia coli UTI89]
 gi|117626267|ref|YP_859590.1| phosphoribosylamine--glycine ligase [Escherichia coli APEC O1]
 gi|218561071|ref|YP_002393984.1| phosphoribosylamine--glycine ligase [Escherichia coli S88]
 gi|227885464|ref|ZP_04003269.1| phosphoribosylamine--glycine ligase [Escherichia coli 83972]
 gi|237702772|ref|ZP_04533253.1| phosphoribosylamine-glycine ligase [Escherichia sp. 3_2_53FAA]
 gi|300977007|ref|ZP_07173725.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 45-1]
 gi|301047742|ref|ZP_07194799.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 185-1]
 gi|29427781|sp|Q8FB69|PUR2_ECOL6 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|26111208|gb|AAN83391.1|AE016770_191 Phosphoribosylamine--glycine ligase [Escherichia coli CFT073]
 gi|91074363|gb|ABE09244.1| Phosphoribosylamine--glycine ligase [Escherichia coli UTI89]
 gi|115515391|gb|ABJ03466.1| phosphoribosylamine--glycine ligase [Escherichia coli APEC O1]
 gi|218367840|emb|CAR05635.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli S88]
 gi|226903085|gb|EEH89344.1| phosphoribosylamine-glycine ligase [Escherichia sp. 3_2_53FAA]
 gi|227837538|gb|EEJ48004.1| phosphoribosylamine--glycine ligase [Escherichia coli 83972]
 gi|294492808|gb|ADE91564.1| phosphoribosylamine--glycine ligase [Escherichia coli IHE3034]
 gi|300300377|gb|EFJ56762.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 185-1]
 gi|300409926|gb|EFJ93464.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 45-1]
 gi|307556148|gb|ADN48923.1| phosphoribosylamine--glycine ligase [Escherichia coli ABU 83972]
 gi|307628379|gb|ADN72683.1| phosphoribosylamine--glycine ligase [Escherichia coli UM146]
 gi|315288326|gb|EFU47725.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 110-3]
 gi|315294359|gb|EFU53710.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 153-1]
 gi|320197099|gb|EFW71717.1| Phosphoribosylamine--glycine ligase [Escherichia coli WV_060327]
 gi|323948824|gb|EGB44721.1| phosphoribosylamine-glycine ligase [Escherichia coli H252]
 gi|323953783|gb|EGB49590.1| phosphoribosylamine-glycine ligase [Escherichia coli H263]
 gi|324009502|gb|EGB78721.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 57-2]
          Length = 429

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVRDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|220931137|ref|YP_002508045.1| carbamoyl-phosphate synthase, large subunit [Halothermothrix orenii
           H 168]
 gi|254813598|sp|B8D1H3|CARB_HALOH RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|219992447|gb|ACL69050.1| carbamoyl-phosphate synthase, large subunit [Halothermothrix orenii
           H 168]
          Length = 1067

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 68/216 (31%), Gaps = 47/216 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL     P  +  ++ ++  A    + +  P+ V  +    G             S G
Sbjct: 133 RELLDDIGEPFIESKIVDNLKEAVQTAQQIGFPVIVRPAYTLGG-------------SGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++ +   +             G   SR+N V +E      +EL   ++ D   
Sbjct: 180 GI--AENVEELKEIV-----------TLGLKRSRINQVLIEKSLYGWKELEYEVIRDGND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLC-----DMLELQG 181
             +          ++E +          +++ P   ++     +  +        L ++G
Sbjct: 227 NCITI-------CNMENIDPVGIHTGDSIVVAPSQTLSDKEYHLLRMASIKIIKALGIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I        L       D  ++E+NP +   + 
Sbjct: 280 GCNIQFALDPEGL-------DYYVIEVNPRVSRSSA 308



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P   G  + S+  A      +  P+ V  S +  GGRG
Sbjct: 673 QVLTSEKIPTPPGYTVFSIEEALKLSHKIGYPVLVRPSYVL-GGRG 717


>gi|240948277|ref|ZP_04752663.1| phosphoribosylamine--glycine ligase [Actinobacillus minor NM305]
 gi|240297316|gb|EER47857.1| phosphoribosylamine--glycine ligase [Actinobacillus minor NM305]
          Length = 430

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|255101334|ref|ZP_05330311.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-63q42]
          Length = 699

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++KY VPV       S+   +  +K +  P+ V+K                 +D  G   
Sbjct: 492 MKKYGVPVPGQGNAKSIDELDEILKYIKYPV-VLKI--------NSSEILHKSDVGGVKI 542

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +    +    EIL       +     + ++ + V++  +   E+ + +  D   G +
Sbjct: 543 GIKNRDEAVDAYNEIL----TNVKKAKPDANIDGILVQEMVESGIEIIIGITNDDQFGPM 598

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQARIDG 187
             +    GG+ +E         ++ L I+    +          +L      +       
Sbjct: 599 LLVG--LGGVFVEVFKDTT---LYPLPINHDEAIMMLKKLKSFKLLNGYRGSEPCDIDAL 653

Query: 188 GDLFPNLYK-AFCDKD-MSLLEINPLIIMKNGR-LRVLDS 224
            D+   L K A+ +KD +  +++NP+ +   G+ +  +D+
Sbjct: 654 ADMMVKLGKYAYENKDEVKEIDLNPVFVYPKGKGVCAVDA 693


>gi|126567333|emb|CAL47315.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 11/92 (11%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        DS  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETKFYAETIFDLMTREKDSKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK 350
           +G ++ I G I     + K   GI+ A +  +
Sbjct: 61  RGKVLIIGGAIADFTDVAKTFTGIIQAFENYQ 92


>gi|119513297|ref|ZP_01632337.1| carbamoyl-phosphate synthase large subunit [Nodularia spumigena
           CCY9414]
 gi|119462060|gb|EAW43057.1| carbamoyl-phosphate synthase large subunit [Nodularia spumigena
           CCY9414]
          Length = 1088

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 32/166 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + K  V V      SS+  ++     +     +++     GG G G              
Sbjct: 136 MAKIGVAVCPSGTASSLAESKEIAAKIGTYPLIIRPAFTMGGTGGG-------------- 181

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  + +                 Q G   S V+ + ++      +E  L ++ D  +  V
Sbjct: 182 IAYNKEEFEEMA-----------QVGIDASPVSQILIDQSLLGWKEYELEVMRD-LADNV 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             I S      IE +          + + P   +T ++   L DM 
Sbjct: 230 VIICS------IENLDPMGIHTGDSITVAPAQTLTDKEYQRLRDMA 269


>gi|323703501|ref|ZP_08115147.1| carbamoyl-phosphate synthase, large subunit [Desulfotomaculum
           nigrificans DSM 574]
 gi|323531492|gb|EGB21385.1| carbamoyl-phosphate synthase, large subunit [Desulfotomaculum
           nigrificans DSM 574]
          Length = 1074

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL+   +P  +G   ++V  A    + L  P+ V  S +  G
Sbjct: 674 KLLKNLGIPQTEGKTATTVEQARQIARELGFPVLVRPSYVLGG 716



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 59/191 (30%), Gaps = 44/191 (23%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +    +   PV +  + S+V    +    +  PL V  +    G            
Sbjct: 129 RELFKATMLEIGEPVPESTIASTVEECIAFANQIGYPLIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +++     L  ++           +N V +E      +E+   ++ 
Sbjct: 177 -TGGGI--VRNEQELVAVCHRGLKMSM-----------INQVLLEQSVAGWKEIEYEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D     +          ++E +          +++ P   ++  +          +   L
Sbjct: 223 DNADNCITI-------CNMENIDPVGVHTGDSIVVAPSQTLSDREYQMLRSSALKIIRAL 275

Query: 178 ELQGQARIDGG 188
           ++ G   +   
Sbjct: 276 KVAGGCNVQFA 286


>gi|253827395|ref|ZP_04870280.1| phosphoribosylamine--glycine ligase [Helicobacter canadensis MIT
           98-5491]
 gi|253510801|gb|EES89460.1| phosphoribosylamine--glycine ligase [Helicobacter canadensis MIT
           98-5491]
          Length = 419

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K   +KY +P A+ +       A   I +L  P+ VVK+     G+              
Sbjct: 105 KEFAKKYGIPTAQFIQTQDYKEACDFIDSLNLPI-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +   S +R++L      K  G +G     V +E+  D
Sbjct: 150 GVVIAQSYEEAKSVVRDMLE----GKSFGDSGK---KVVIEEFLD 187


>gi|194477256|ref|YP_002049435.1| carbamoyl-phosphate synthase, large subunit [Paulinella
           chromatophora]
 gi|171192263|gb|ACB43225.1| carbamoyl-phosphate synthase, large subunit [Paulinella
           chromatophora]
          Length = 1100

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + S++  A+   +T+     +++     GG G G           
Sbjct: 133 KQAMERIEVHVCPSGIASNLEEAKEVGETIGSYPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +E           G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFFAICKE-----------GLEASPVSQILIEQSLLGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|52549001|gb|AAU82850.1| conserved hypothetical protein [uncultured archaeon GZfos1D1]
          Length = 448

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 292 APANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCD--VLVKGILSAVKEV 349
            PAN LD  G A  +       I+ SD  +  +L+ I+      D  +  + ++ A K  
Sbjct: 338 TPANPLDTAGDASYEMFRDVVDIVLSDPGINALLV-IYVHAEMVDPCLPAEAVIDARKGC 396

Query: 350 KINIPLVMRLEGANVDIGNRLIAESGLN 377
              + +   + G  ++   + + E+ + 
Sbjct: 397 GKPV-ITSWIGGKGLETAVQRLEENRIP 423


>gi|82617306|emb|CAI64211.1| probable acetyl-CoA synthetase [uncultured archaeon]
          Length = 895

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 78/229 (34%), Gaps = 16/229 (6%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA+L  Y +PVA+ +V  S     S    +  P+ V         +        
Sbjct: 493 LTETEAKAVLDAYQIPVARMLVAKSAEECASLASEIGFPVAV---------KILSPDVTH 543

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D  G +   ++ +  +S    ++ +T  ++        V    V+   D  +   + +
Sbjct: 544 KTDVGGVILDVATPEEGVSAFERVVANTKASQPDA----LVTGATVQKMIDEDQGYEIII 599

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
                S     I    GG  +E              +     +    + SL      +  
Sbjct: 600 GSKFDSLFGPAILFGAGGTAVELFRDLTLGFPPLNQVLARRMIEDTKIHSLLKGFRDKPP 659

Query: 183 ARIDGGD--LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           A I   +  L    Y      ++  ++INP+ +  +  +  LD++I  D
Sbjct: 660 ANILFIEETLVKISYMLIDFPEIVEMDINPIYVD-DKSIIALDARIIID 707


>gi|87308406|ref|ZP_01090547.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
           [Blastopirellula marina DSM 3645]
 gi|87288963|gb|EAQ80856.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain
           [Blastopirellula marina DSM 3645]
          Length = 1088

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 28/137 (20%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q KA + K  + V +G  + ++  A + +  +  P  V               +      
Sbjct: 131 QFKAAMEKIGLEVCRGGTVHTIQEARAVLDEIGLPAVV---------------RPSFTMG 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G  +  + +   S +R  L  +            VN V +E+     +E  + ++  R
Sbjct: 176 GSGSAIAYNREEFDSLVRNGLDQS-----------PVNEVLIEESVIGWKEYEMEVM--R 222

Query: 127 TSGMVAFIASTQGGMDI 143
                  I  T    D 
Sbjct: 223 DVADNVVIICTIENFDP 239


>gi|315181563|gb|ADT88476.1| acyl-CoA synthetase [Vibrio furnissii NCTC 11218]
          Length = 895

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 26/141 (18%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAIDTLLERGGKLAELEASVFETLNQCLPQSWSHSNPIDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +   A   +     +  ILI +    I   +   + I+ A+KE   +    +  
Sbjct: 354 GDADHTRYVNALNAVLDSDDIDAILIMHSPSAIAHSEQTAQVIVDAIKEHPRSPRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLN 377
             +         ++  ++G+ 
Sbjct: 414 NWSGELTAKPARQIFNQAGIP 434



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 17/137 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ +N  V    + S    A    +T+  P+ V         + +       +D +G +
Sbjct: 501 LLKCFNFNVLPTWIASDASEAVHIAETIGYPVAV---------KLRSPDIAHKSDVQGVM 551

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
               +   V S  + IL  T I+  +      ++ + V+  A +    EL + +  D T 
Sbjct: 552 LNLRNSAEVASAAQAILDRTQISYPSAN----IHGLLVQGMAKLAGGEELRIKVKHDTTF 607

Query: 129 GMVAFIASTQGGMDIEE 145
           G V  +   QGG +  E
Sbjct: 608 GPVILLG--QGGSEWNE 622


>gi|257416296|ref|ZP_05593290.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis
           AR01/DG]
 gi|257158124|gb|EEU88084.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis
           ARO1/DG]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|256959183|ref|ZP_05563354.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis DS5]
 gi|300860508|ref|ZP_07106595.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TUSoD
           Ef11]
 gi|256949679|gb|EEU66311.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis DS5]
 gi|300849547|gb|EFK77297.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TUSoD
           Ef11]
 gi|315036666|gb|EFT48598.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0027]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|256419971|ref|YP_003120624.1| carbamoyl phosphate synthase large subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256034879|gb|ACU58423.1| carbamoyl-phosphate synthase, large subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 939

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           M+I E + +   LL    +P  K     +   A    K +  P+ V  S +  G R
Sbjct: 666 MDIAEDRGRFSELLEDLKIPFPKYGTAYNTDDAIEVAKEVGYPVLVRPSYVLGGQR 721


>gi|222035716|emb|CAP78461.1| Phosphoribosylamine--glycine ligase [Escherichia coli LF82]
 gi|312948579|gb|ADR29406.1| phosphoribosylamine--glycine ligase [Escherichia coli O83:H1 str.
           NRG 857C]
          Length = 429

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVRDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|167761104|ref|ZP_02433231.1| hypothetical protein CLOSCI_03502 [Clostridium scindens ATCC 35704]
 gi|167661338|gb|EDS05468.1| hypothetical protein CLOSCI_03502 [Clostridium scindens ATCC 35704]
          Length = 1075

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R+      +P+ +  + ++V  A +  + +  P+ V  S +  GGRG
Sbjct: 668 RDLFREMMEKLEIPMPESGMATTVEEALAIAREIGYPVMVRPSYVL-GGRG 717



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 26/118 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  +V  A +    L  P+                 +        G  +  +
Sbjct: 140 GIEMARSEVAYTVEEALAIADDLGYPVV---------------LRPAYTMGGAGGGLVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
              + +     L ++L           V  V VE+      EL L ++ D  + M+  
Sbjct: 185 KDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEIVRDADNNMITV 231


>gi|126697795|ref|YP_001086692.1| phosphoribosylamine--glycine ligase [Clostridium difficile 630]
 gi|255099384|ref|ZP_05328361.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-63q42]
 gi|255305242|ref|ZP_05349414.1| phosphoribosylamine--glycine ligase [Clostridium difficile ATCC
           43255]
 gi|115249232|emb|CAJ67045.1| Phosphoribosylamine--glycine ligase [Clostridium difficile]
          Length = 416

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 26/166 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P AK    +++  A S I +   P+ V+K+   A G+             
Sbjct: 106 SKEFMIKHNIPTAKYKEYTNLEEAISEIDSFGYPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  I+ ++E+    +  K+ G  G   + + +E+    +     S+L    
Sbjct: 152 -GVVIPENREDAIATLKEM----MSDKKFGAAG---DKIVIEEFLKGIE---TSILAFVD 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           +  +  +AS +    +    +  P         P    T E    +
Sbjct: 201 NDTIVPMASAKDHKKVNNY-EQGPNTGGMGTFSPSEIYTEELANKV 245


>gi|325295527|ref|YP_004282041.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065975|gb|ADY73982.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 472

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQ 48
           +AK L+++  VPVA+G    ++ +  A+   + +  P+ +  + 
Sbjct: 117 EAKKLMKELGVPVAEGSEEPVADLGEAKEIARKIGYPVMIKAAH 160


>gi|270158586|ref|ZP_06187243.1| phosphoribosylamine-glycine ligase [Legionella longbeachae D-4968]
 gi|289166585|ref|YP_003456723.1| Phosphoribosylamine-glycine ligase [Legionella longbeachae NSW150]
 gi|269990611|gb|EEZ96865.1| phosphoribosylamine-glycine ligase [Legionella longbeachae D-4968]
 gi|288859758|emb|CBJ13739.1| Phosphoribosylamine-glycine ligase [Legionella longbeachae NSW150]
          Length = 438

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 25/126 (19%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L++KY++P V      +S++  ES +  L    YV+K+                   
Sbjct: 109 ARDLMQKYDIPGVPLYKKFTSLNHIESFLNELGEGSYVIKA---------NGLMSGKGVK 159

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G  +  S+   +S  +EIL                  + +E+   I +E  L    D 
Sbjct: 160 VAGEHL-HSIAEAMSFCQEILNQN-------------QTILIEEKL-IGQEFSLMCFADG 204

Query: 127 TSGMVA 132
              +  
Sbjct: 205 KHLIPM 210


>gi|261494032|ref|ZP_05990535.1| phosphoribosylamine--glycine ligase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496208|ref|ZP_05992614.1| phosphoribosylamine--glycine ligase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308160|gb|EEY09457.1| phosphoribosylamine--glycine ligase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310198|gb|EEY11398.1| phosphoribosylamine--glycine ligase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 451

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 132 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 177 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 228

Query: 129 GMVA 132
               
Sbjct: 229 VEPM 232


>gi|257419502|ref|ZP_05596496.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T11]
 gi|257161330|gb|EEU91290.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T11]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|255975644|ref|ZP_05426230.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T2]
 gi|307277857|ref|ZP_07558941.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0860]
 gi|255968516|gb|EET99138.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T2]
 gi|306505254|gb|EFM74440.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0860]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|255519506|dbj|BAH90729.1| ATP citrate lyase [uncultured prokaryote]
          Length = 111

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 16/111 (14%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    +N+ +  G    D+     + +         +S 
Sbjct: 1   WTMVAGGGASVVYADTIADLIGVNELSNYGEYSGNPSTDETRFYAETVIDLMTREKHASG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVKINIPLV-----MRLEGANV 364
            G ++ I G I     + K   GI+ A +++   +  V     +R  G N 
Sbjct: 61  AGKILLIGGAIANFTDVAKTFTGIIQAFEKMADKMKSVGTKIYVRRGGPNY 111


>gi|304315733|ref|YP_003850878.1| D-alanine/D-alanine ligase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777235|gb|ADL67794.1| D-alanine/D-alanine ligase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 361

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 43/193 (22%)

Query: 8   AKALLRKYNVPVAKGVV--------ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           +K +  +  +P  K  V        + +       +  +  P +V  + +          
Sbjct: 140 SKRIFLEAGIPTPKFTVVYRKELNNVDNYEEIRRRVSEIGYPCFVKPANM---------- 189

Query: 60  KELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                 S  G+    +   ++       G  L +K           + +E+G D  RE+ 
Sbjct: 190 -----GSSVGITKVHNENELMD------GLKLASKYD-------RKIIIEEGID-AREIE 230

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDM-- 176
            S+L +  +   +         +  +    Y  +  KL I  P+  V  E++  L     
Sbjct: 231 CSVLGN-DNPEASIAGEIVPAHEFYDYDAKYFDEASKLFIPAPIPDVKMEEIRELAIKAY 289

Query: 177 --LELQGQARIDG 187
             L+++G AR+D 
Sbjct: 290 IALDVRGMARVDF 302


>gi|237807315|ref|YP_002891755.1| phosphoribosylamine/glycine ligase [Tolumonas auensis DSM 9187]
 gi|237499576|gb|ACQ92169.1| phosphoribosylamine/glycine ligase [Tolumonas auensis DSM 9187]
          Length = 428

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTADYQNFTEIEPALAYLKEKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAVRDML----SGNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|167770179|ref|ZP_02442232.1| hypothetical protein ANACOL_01522 [Anaerotruncus colihominis DSM
           17241]
 gi|167667501|gb|EDS11631.1| hypothetical protein ANACOL_01522 [Anaerotruncus colihominis DSM
           17241]
          Length = 522

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 16/143 (11%)

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGADQDKVAAAFKI 314
            + +   G+IG +            +I  +GG  +  L     D+        +      
Sbjct: 187 FANVVKPGDIGIVGASGTGTQEVSSLIDQFGGGCSQVLGTGGRDLKLEIGGIMMTLGLDA 246

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           + +D   K I +         + +   IL   +      P+V+   G +       + + 
Sbjct: 247 LINDPMTKVITLI---SKPPAEEIADKILK--QAAGAGKPVVVCFIGGDPAQ----VEKY 297

Query: 375 GLNVITAIDLDDAAQKIVHAVKG 397
           GL    A  L+DAA+K V   KG
Sbjct: 298 GLT--AACSLEDAARKAVAFSKG 318


>gi|149277329|ref|ZP_01883471.1| carbamoyl-phosphate synthase large subunit [Pedobacter sp. BAL39]
 gi|149232206|gb|EDM37583.1| carbamoyl-phosphate synthase large subunit [Pedobacter sp. BAL39]
          Length = 938

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 26/108 (24%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++  +P  +  V  +   A      +  P+ V  S +  G                G
Sbjct: 677 DLLKELEIPYPRYGVAENAEEAIVVANEVGYPVLVRPSYVLGG---------------QG 721

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           + +  + + +   + ++LG               N V ++   D   E
Sbjct: 722 MSIVINDEDLEKAVVKLLG-----------DLPGNRVLIDHFLDRAEE 758



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 39/135 (28%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+    V VA   + +S    + A + +  PL +  S    G    G F     D   
Sbjct: 133 RQLMIDIGVGVAPSKIANSFLEGKEAAQQIGYPLVIRPSYTLGG--SGGGFVHKKEDFDH 190

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            +                        Q G   S  + V VE      +E  L LL  R S
Sbjct: 191 AL------------------------QRGLEASPTHEVLVEKAVFGWKEYELELL--RDS 224

Query: 129 GMVAFIASTQGGMDI 143
                I  +    D 
Sbjct: 225 NDNVIIICSIENFDP 239


>gi|157962145|ref|YP_001502179.1| GCN5-like N-acetyltransferase [Shewanella pealeana ATCC 700345]
 gi|157847145|gb|ABV87644.1| GCN5-related N-acetyltransferase [Shewanella pealeana ATCC 700345]
          Length = 898

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++++A+L  Y +        ++   A    K    P+  +K Q               +D
Sbjct: 498 HESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPI-ALKLQ--------SPDIHYKSD 548

Query: 66  SKGGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            +G +   +S   V      ++   + +       G  V  + +  G    +E+ +++  
Sbjct: 549 IQGVMLNLTSDLEVEHAANAMIERVISVNPDARIEGLIVQKMALTAG---AQEIRVAVAN 605

Query: 125 DRTSGMVAFIASTQGGMDIE 144
           D   G    +   +GG + E
Sbjct: 606 DPVFGPAILLG--EGGSEWE 623


>gi|116249741|ref|YP_765579.1| putative urea amidolyase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115254389|emb|CAK04022.1| putative urea amidolyase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 1179

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 86/224 (38%), Gaps = 37/224 (16%)

Query: 8   AKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L +   VP+  G  ++ SV  A SA +T+  P+ ++KS    GG G     +L AD+
Sbjct: 119 ARELAKASGVPLLPGTDLLQSVEEALSAAETVGYPV-MLKSTAGGGGIGM----QLCADA 173

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G   + +S +SV    R   G                 VY+E      R + + +  D 
Sbjct: 174 AG---LTASFESVQRTARASFGDA--------------RVYIERFVAEARHVEVQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
             G    IA  +    ++   +   ++       P  G+++E  A L     +L      
Sbjct: 217 KGG---VIALGERDCSLQRRNQKVVEET------PAPGLSAETRARLHKAAVDLGRSVSY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +       +Y     ++   LE+N  + +++    V ++    D
Sbjct: 268 ESAGTVEFIYDP-QREEFYFLEVNTRLQVEHP---VTEAVFGID 307


>gi|73669860|ref|YP_305875.1| carbamoyl phosphate synthase large subunit [Methanosarcina barkeri
           str. Fusaro]
 gi|121697017|sp|Q469Z7|CARB_METBF RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|72397022|gb|AAZ71295.1| carbamoyl-phosphate synthase large subunit [Methanosarcina barkeri
           str. Fusaro]
          Length = 1071

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 41/192 (21%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  VP  +G   +S   A    K +  P+ V  S +  G                 +
Sbjct: 675 LMKELGVPQPEGGYATSHKEAIEVAKRIGFPVLVRPSYVLGG---------------RAM 719

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
            +      +   ++E +    ++ +        + + ++D  +   E+ +  + D+    
Sbjct: 720 EIVYDEIDLERYMKEAVR---VSHE--------HPILIDDFLEAASEIDVDAVCDQKD-- 766

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQGQA 183
              I +      IEE           +   P   ++ E +         +   L+++G  
Sbjct: 767 -VIIGAIME--HIEEAGVHSGDSACVI---PPQSLSPEVLDQVRDYTRKIALALKVKGLI 820

Query: 184 RIDGGDLFPNLY 195
            I   +    +Y
Sbjct: 821 NIQMAEKCGKVY 832


>gi|327399335|ref|YP_004340204.1| carbamoyl-phosphate synthase large subunit [Hippea maritima DSM
           10411]
 gi|327181964|gb|AEA34145.1| carbamoyl-phosphate synthase, large subunit [Hippea maritima DSM
           10411]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + V    V  S+  A   +  +  P+ +  S    G                
Sbjct: 133 KQAMNEIGLKVPASGVAHSLSEAWEIVNAIHFPVIIRPSFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  + +     ++  L  +            VN V +E      +E  L ++  R  
Sbjct: 178 GAGVAYNKEEFEEVVKWGLEQS-----------PVNEVLIEQSVLGWKEFELEVM--RDK 224

Query: 129 GMVAFIASTQGGMDI 143
               FI  +    D 
Sbjct: 225 KDNVFIICSIENFDP 239


>gi|311103480|ref|YP_003976333.1| CoA-binding protein [Achromobacter xylosoxidans A8]
 gi|310758169|gb|ADP13618.1| CoA binding domain protein 1 [Achromobacter xylosoxidans A8]
          Length = 700

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 42/234 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK LL +  V V  G V  +   A +A     GP+   +V  QI              +D
Sbjct: 489 AKQLLSEAGVAVPFGRVCRTADDAVAAAAQCDGPVVAKIVSPQIL-----------HKSD 537

Query: 66  SKGGVRVESSLKSVISDIR-EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G +    + + + +     +  +     Q    G  +  +  + G     E  + +  
Sbjct: 538 IGGVIVGLRTAEEIRNAWELIMARAREAYPQADIEGILIEQMMAQRGV----ETLVGVHR 593

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---ELQG 181
           D   G V       GG+ +E       + +          +T  +  ++       +L  
Sbjct: 594 DDLFGHVLTFG--LGGVYVEVFRDVSRRLLP---------LTPAEARAMIAETRCHQLLA 642

Query: 182 QARIDGGDLFPNLYKAFCD---------KDMSLLEINPLIIMKNGRLRVLDSKI 226
             R         L K              ++  L++NP+++  +G +  LD+ +
Sbjct: 643 GCRGQAPADIGALEKLLLAVSDFVTRGPYEVQELDLNPVLVSPDGAV-ALDAVL 695


>gi|312883380|ref|ZP_07743106.1| Acyl-CoA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368996|gb|EFP96522.1| Acyl-CoA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 892

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 70/224 (31%), Gaps = 26/224 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
              + + V    +      A    + L  P+ V         + +    +  +  +G + 
Sbjct: 502 FELFGLEVLPNYIADDSSEAIHLAEKLGYPVAV---------KLRSVDIQHKSSVQGVML 552

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSG 129
              +   V   +  IL             + +N V V+  A  L   EL + +  D   G
Sbjct: 553 NLRNSDEVAHAVDAILDR----AHWYDPSAHINGVLVQKMAKSLDFEELRIQVKTDPIFG 608

Query: 130 MVAFIASTQGGMDIEEVA----KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              FI       DI   +          + K LI     + +     +    +       
Sbjct: 609 PSIFIGQGGANWDISADSICGLPPLNTALAKNLI-----IQAMQKGKIRQYRDQNTIDID 663

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
               +   + +   +  ++  L+I+PL + K  R  +LD+ +S 
Sbjct: 664 GLAQILVTISQMIIECPEIVDLDIHPL-LTKGTRFIILDANLSI 706


>gi|291278872|ref|YP_003495707.1| acetyl-CoA carboxylase biotin carboxylase subunit [Deferribacter
           desulfuricans SSM1]
 gi|290753574|dbj|BAI79951.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Deferribacter
           desulfuricans SSM1]
          Length = 445

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AK  ++KY VPV  G    ++    A    K +  P+ +  S
Sbjct: 119 AKETMKKYGVPVVPGSEGAVADPDEALKIAKEIGFPVIIKAS 160


>gi|254431447|ref|ZP_05045150.1| acetyl-CoA carboxylase, biotin carboxylase [Cyanobium sp. PCC 7001]
 gi|197625900|gb|EDY38459.1| acetyl-CoA carboxylase, biotin carboxylase [Cyanobium sp. PCC 7001]
          Length = 450

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 95/277 (34%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +++  VP   G   ++ S   A     ++  P+ ++K+    GGRG  R    P  
Sbjct: 120 AKATMQRVGVPTIPGSEGLLHSPEQAAGLAASMGYPV-MIKATAGGGGRGM-RLVPGPDQ 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +G  +                         G  G     +Y+E   D  R + + +L D
Sbjct: 178 LEGLFKAAQGEAEAA---------------FGNPG-----LYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQAR 184
           R       +   +    I+   +   ++   + I+  +     D A +    +  +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEEAPSVAINADLRRQMGDAAVAAARTIGYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D   N Y  F + +  +   +P+  M  G  L     +I+  +    +  +IQ L
Sbjct: 275 VEFLVDRSGNFY--FMEMNTRIQVEHPVTEMVTGVDLIAEQLRIAGGEPISVKQEEIQ-L 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
           R  + E     E  + N       G I       G G
Sbjct: 332 RGHAIEVRINAEDPRQNFR--PAPGKITGWLPPGGPG 366


>gi|45357816|ref|NP_987373.1| CoA-binding domain-containing protein [Methanococcus maripaludis
           S2]
 gi|45047376|emb|CAF29809.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunits
           [Methanococcus maripaludis S2]
          Length = 702

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 38/155 (24%)

Query: 270 GCMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQDKV 308
             + N  G  +   D ++  G   A+F                     LD+ G AD ++ 
Sbjct: 300 AVITNAGGFGVLAADSVEKCGLELADFSATTISELKKYLPDTSGISNPLDLIGDADVNRY 359

Query: 309 AAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI-------NIPLVMR-LE 360
             AF+++ +D +V G+L  +     +      G+   + ++K         IP+V   + 
Sbjct: 360 KHAFELVENDPNVDGLLAIL---TPQGMTDALGVARELVKLKNYMICKKDKIPIVASFVG 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           G +V      + E G+      +L       VHA+
Sbjct: 417 GTSVLEARSYLQEKGIPSFICPEL------AVHAL 445



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY-VVKSQIH 50
           +K  L+     + +  V ++   A+   + L   +  VV + I 
Sbjct: 494 SKEFLKLNGFAIPEKFVATTKEEAKEYAENLGKVVMKVVSADIL 537


>gi|312901816|ref|ZP_07761082.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0470]
 gi|311291093|gb|EFQ69649.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0470]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFQRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|296330110|ref|ZP_06872592.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673355|ref|YP_003865027.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152699|gb|EFG93566.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411599|gb|ADM36718.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 422

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMKKYDIPTAEYDTFTSFEEAKAYVQEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAMTEEEAIACLHDFL-------EDEKFGDASASVVIEEFLS-GEEFSLMAFVKGE 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 KVYPMVIA 210


>gi|118444928|ref|YP_878874.1| carbamoyl phosphate synthase large subunit [Clostridium novyi NT]
 gi|118135384|gb|ABK62428.1| carbamoyl-phosphate synthase, large subunit [Clostridium novyi NT]
          Length = 1063

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 37/202 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL + N+    G  ++S+  A   ++ L  P+ V  S +  GGR      +  A    
Sbjct: 671 RELLEELNIKTPTGNAVTSIEEAYKVVENLGYPVIVRPSYV-IGGRAMEVIYDDKA---- 725

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +E  +K  +S   E      I       G+ +    + DG DIL             
Sbjct: 726 ---LEKYMKEAVSLSSE----HTIIVDKYVRGTEIEVDAICDGEDIL------------- 765

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
            M   +        IE         I    + P + ++ + V  L +  +    A    G
Sbjct: 766 -MPGIM------EHIERTGVHSGDSI---TVYPYMTLSEDTVKKLVENTKKIATALNIVG 815

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               N+   F  KD+ ++E+NP
Sbjct: 816 --LVNIQYVFDGKDIYVIEVNP 835


>gi|332159562|ref|YP_004424841.1| GMP synthase subunit B [Pyrococcus sp. NA2]
 gi|331035025|gb|AEC52837.1| GMP synthase subunit B [Pyrococcus sp. NA2]
          Length = 308

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A K +   L+ V        +G+  F       + G+ +         D +
Sbjct: 31  VDSSTAAVLAYKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHY------VDAQ 84

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           +   S L          ++   V++E   ++ RE+    L+  T     +I S QG +  
Sbjct: 85  DRFFSALKGVTDPEEKRKIIGRVFIEVFEEVAREIGAEYLIQGTIA-PDWIES-QGKIKS 142

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+++   LI+PL  +  ++V  L   L L 
Sbjct: 143 HHNVGGLPERLNLKLIEPLRDLYKDEVRELAKFLGLP 179


>gi|295113151|emb|CBL31788.1| phosphoribosylamine--glycine ligase [Enterococcus sp. 7L76]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFQRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|284925554|gb|ADC27906.1| carbamoyl-phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni IA3902]
          Length = 1089

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELTNTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|257051794|ref|YP_003129627.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halorhabdus utahensis DSM 12940]
 gi|256690557|gb|ACV10894.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halorhabdus utahensis DSM 12940]
          Length = 398

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 18/110 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L    VPV +   + SV     A+  L  P  ++K+            +E   D +G
Sbjct: 112 KRRLEDAGVPVPEFRGVDSVGELHDALDELGYP-AMLKA------------REGGYDGRG 158

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            V    +   V      I+ +        P+G       VE   D  REL
Sbjct: 159 NV-PIETPDDVEDAFETIVDAAPGATLDDPSG----AAMVEGFVDFQREL 203


>gi|255654308|ref|ZP_05399717.1| phosphoribosylamine--glycine ligase [Clostridium difficile
           QCD-23m63]
 gi|296452598|ref|ZP_06894292.1| phosphoribosylamine-glycine ligase [Clostridium difficile NAP08]
 gi|296880990|ref|ZP_06904936.1| phosphoribosylamine-glycine ligase [Clostridium difficile NAP07]
 gi|296258559|gb|EFH05460.1| phosphoribosylamine-glycine ligase [Clostridium difficile NAP08]
 gi|296428011|gb|EFH13912.1| phosphoribosylamine-glycine ligase [Clostridium difficile NAP07]
          Length = 416

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 26/166 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P AK    +++  A S I     P+ V+K+   A G+             
Sbjct: 106 SKEFMIKHNIPTAKYKEYTNLEEAISEIDNFGYPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  I+ ++E+    +  K+ G  G   + + +E+    +     S+L    
Sbjct: 152 -GVVIPENREDAIATLKEM----MSDKKFGAAG---DKIVIEEFLKGIE---TSILAFVD 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
           +  +  +AS +    +    +  P         P    T E    +
Sbjct: 201 NDTIVPMASAKDHKKVNNY-EQGPNTGGMGTFSPSEIYTEELANRV 245


>gi|330752600|emb|CBL87545.1| carbamoyl phosphate synthase large subunit [uncultured
           Flavobacteria bacterium]
          Length = 938

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ N+P  K  V+ S   A    K L  PL V  S +  G + K    E   +    
Sbjct: 677 KLLKENNIPYPKFGVVKSAEQAIELSKDLGFPLLVRPSYVLGGQKMKIVINENELEHHVV 736

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV----YVEDGADILRELY 119
             +     + I     + G+          G RV  +    ++E       + Y
Sbjct: 737 DILRDMPDNKILLDHYLDGAIEAEADAICDGERVQIIGIMQHIEPAGIHSGDSY 790


>gi|284175248|ref|ZP_06389217.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Sulfolobus solfataricus 98/2]
          Length = 278

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 27/208 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A  L+  Y +   K  + ++ + A++    +  P+ +                 +   
Sbjct: 98  FEALKLMEIYGIRTPKWGLATNENEAQNVADNIGFPVVM----------KISPDTPVHKT 147

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V    + V     E+                 + V ++   +   E+++  L D
Sbjct: 148 EMKGVVVNVEKEDVKKVYSEL-------------SKITSRVLIQQQLN-GLEIFVGGLKD 193

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  + S  GG+ +E V K+    +  +  D    +  E           +G    
Sbjct: 194 PAFGHVVLVGS--GGIYVE-VLKNVAYALSPVYEDEAQELLVESKIHDMLYARKRGYDEN 250

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLII 213
                   + +   D ++  ++INPL +
Sbjct: 251 SLIRTITRVSRMIVDLNVKEMDINPLFV 278


>gi|257084975|ref|ZP_05579336.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis Fly1]
 gi|256993005|gb|EEU80307.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis Fly1]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|255015285|ref|ZP_05287411.1| hypothetical protein B2_15356 [Bacteroides sp. 2_1_7]
          Length = 401

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 35/185 (18%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +          KY V  A    ISS      AI  + G   ++K+   AG R      
Sbjct: 111 MKLR-------FSKYGVNTAAFKQISSDEDLLDAIDKIGGYPVIIKATDLAGSR------ 157

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                   G+   ++ +                       ++V+ V +E      RE   
Sbjct: 158 --------GIYKANNEEEAFE-----------GFYKAKNVTKVDYVLIEKFLQ-GREF-- 195

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                 ++G + F+      +   + A      +     D L    +E+       + L 
Sbjct: 196 GAQAFISNGEILFVMPHGDILYQADTAVPVGHYVPYECSDVLREKMTEEARKAIKAIGLD 255

Query: 181 GQARI 185
             A  
Sbjct: 256 DCAVN 260


>gi|163784873|ref|ZP_02179646.1| biotin carboxylase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879859|gb|EDP73590.1| biotin carboxylase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 472

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           +K  +R+  VPV  G    I+ +  A+   K +  P+ +  +
Sbjct: 117 SKKAMREAGVPVLPGTDEPITDLEEAKKVAKKIGFPVIIKAA 158


>gi|29376324|ref|NP_815478.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis V583]
 gi|227518965|ref|ZP_03949014.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0104]
 gi|227553587|ref|ZP_03983636.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis HH22]
 gi|256961722|ref|ZP_05565893.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis Merz96]
 gi|293383427|ref|ZP_06629340.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis R712]
 gi|293388920|ref|ZP_06633405.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis S613]
 gi|312907745|ref|ZP_07766736.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis DAPTO
           512]
 gi|312910363|ref|ZP_07769210.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis DAPTO
           516]
 gi|29343787|gb|AAO81548.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis V583]
 gi|227073586|gb|EEI11549.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0104]
 gi|227177280|gb|EEI58252.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis HH22]
 gi|256952218|gb|EEU68850.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis Merz96]
 gi|291079218|gb|EFE16582.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis R712]
 gi|291081701|gb|EFE18664.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis S613]
 gi|310626773|gb|EFQ10056.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis DAPTO
           512]
 gi|311289636|gb|EFQ68192.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis DAPTO
           516]
 gi|315576012|gb|EFU88203.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0309B]
 gi|315580732|gb|EFU92923.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0309A]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|323173097|gb|EFZ58728.1| acetyltransferase family protein [Escherichia coli LT-68]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|315091957|gb|EFT63933.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL110PA4]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  S     + I G   I  +    G
Sbjct: 193 GKGLELSPVSECLVEQSIAGYKEIEYEMMRDG 224



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764


>gi|309792429|ref|ZP_07686895.1| carbamoyl-phosphate synthase, large subunit [Oscillochloris
           trichoides DG6]
 gi|308225539|gb|EFO79301.1| carbamoyl-phosphate synthase, large subunit [Oscillochloris
           trichoides DG6]
          Length = 1076

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           ALL +  +P       +S   A +A + +  P+ V  S +  GGR   
Sbjct: 684 ALLDRLGIPAPAHGSATSWEEARAAAEQIGYPVVVRPSYVL-GGRAMA 730



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 52/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +    +  + VA+     S+  A + +     P  +  S    G            
Sbjct: 129 RQLFKDKMLEIGLSVARSGTAHSLDEALTIVGETGFPAIIRPSFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  +++     +   L ++            V  V +E+     +E  + ++ 
Sbjct: 177 ---AGGGIAYNIEEFREIVERGLDAS-----------PVTQVLIEESVLGWKEFEMEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR       I S      IE +          + + P + +T  +   + D 
Sbjct: 223 DRMDNG-VIICS------IENIDPMGVHTGDSITVAPAMTLTDREYQQMRDQ 267


>gi|331684234|ref|ZP_08384830.1| putative CoA binding domain protein [Escherichia coli H299]
 gi|331079186|gb|EGI50388.1| putative CoA binding domain protein [Escherichia coli H299]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|331674033|ref|ZP_08374796.1| putative CoA binding domain protein [Escherichia coli TA280]
 gi|331069306|gb|EGI40698.1| putative CoA binding domain protein [Escherichia coli TA280]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|301024871|ref|ZP_07188508.1| CoA binding domain protein [Escherichia coli MS 69-1]
 gi|300396402|gb|EFJ79940.1| CoA binding domain protein [Escherichia coli MS 69-1]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|293411000|ref|ZP_06654576.1| yfiQ protein [Escherichia coli B354]
 gi|291471468|gb|EFF13952.1| yfiQ protein [Escherichia coli B354]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|293446939|ref|ZP_06663361.1| hypothetical protein ECCG_01089 [Escherichia coli B088]
 gi|291323769|gb|EFE63197.1| hypothetical protein ECCG_01089 [Escherichia coli B088]
          Length = 881

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 476 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 524

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 525 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 581

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 582 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 633

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 634 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 689


>gi|215403231|ref|ZP_03415412.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis 02_1987]
 gi|289745134|ref|ZP_06504512.1| carbamoylphosphate synthase large subunit [Mycobacterium
           tuberculosis 02_1987]
 gi|289685662|gb|EFD53150.1| carbamoylphosphate synthase large subunit [Mycobacterium
           tuberculosis 02_1987]
          Length = 1008

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 738


>gi|215487927|ref|YP_002330358.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312965500|ref|ZP_07779732.1| acetyltransferase, GNAT family [Escherichia coli 2362-75]
 gi|215265999|emb|CAS10409.1| fused predicted acyl-CoA synthetase: NAD(P)-binding
           subunit/ATP-binding subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312289920|gb|EFR17808.1| acetyltransferase, GNAT family [Escherichia coli 2362-75]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|209920064|ref|YP_002294148.1| hypothetical protein ECSE_2873 [Escherichia coli SE11]
 gi|300817638|ref|ZP_07097853.1| CoA binding domain protein [Escherichia coli MS 107-1]
 gi|300820735|ref|ZP_07100885.1| CoA binding domain protein [Escherichia coli MS 119-7]
 gi|331678581|ref|ZP_08379256.1| putative CoA binding domain protein [Escherichia coli H591]
 gi|209913323|dbj|BAG78397.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|300526488|gb|EFK47557.1| CoA binding domain protein [Escherichia coli MS 119-7]
 gi|300529626|gb|EFK50688.1| CoA binding domain protein [Escherichia coli MS 107-1]
 gi|323184536|gb|EFZ69910.1| acetyltransferase family protein [Escherichia coli 1357]
 gi|323944584|gb|EGB40653.1| acetyltransferase [Escherichia coli H120]
 gi|324019982|gb|EGB89201.1| CoA binding domain protein [Escherichia coli MS 117-3]
 gi|331075041|gb|EGI46361.1| putative CoA binding domain protein [Escherichia coli H591]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|170681301|ref|YP_001744773.1| CoA-binding domain/acetyltransferase domain-containing protein
           [Escherichia coli SMS-3-5]
 gi|170519019|gb|ACB17197.1| CoA binding domain/acetyltransferase domain protein [Escherichia
           coli SMS-3-5]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|163784987|ref|ZP_02179730.1| hypothetical protein HG1285_11425 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879746|gb|EDP73507.1| hypothetical protein HG1285_11425 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 30

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 370 LIAESGLNVITAIDLDDAAQKIVHAVKG 397
           ++ ESGLN+ITA  + + A K V A K 
Sbjct: 1   MLNESGLNLITADTMWEGAVKAVEASKS 28


>gi|189424657|ref|YP_001951834.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacter lovleyi SZ]
 gi|189420916|gb|ACD95314.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacter lovleyi SZ]
          Length = 446

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 14  KYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++ VP+  G    + +V  A    K +  P+ ++K+    GGRG
Sbjct: 125 EHGVPILPGTKENVKTVDEAVKIAKQIGFPV-IIKATAGGGGRG 167


>gi|86149694|ref|ZP_01067924.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|85839962|gb|EAQ57221.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni CF93-6]
          Length = 1089

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELTNTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|188491676|ref|ZP_02998946.1| acetyltransferase, GNAT family protein [Escherichia coli 53638]
 gi|188486875|gb|EDU61978.1| acetyltransferase, GNAT family protein [Escherichia coli 53638]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 73/237 (30%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++        P+    + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 639 IRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|222110897|ref|YP_002553161.1| phosphoribosylamine--glycine ligase [Acidovorax ebreus TPSY]
 gi|221730341|gb|ACM33161.1| phosphoribosylamine/glycine ligase [Acidovorax ebreus TPSY]
          Length = 428

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 15/96 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A+    +   AA + +  L  P+ V+K+   A G+             
Sbjct: 106 SKAFMKRHGIPTAEYETFTDPQAAHAYVNRLGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L+     +  +L            G+RV
Sbjct: 152 -GVVVAMTLQEAHDAVDFMLVDNKYGVAHNEGGARV 186


>gi|167623888|ref|YP_001674182.1| GCN5-like N-acetyltransferase [Shewanella halifaxensis HAW-EB4]
 gi|167353910|gb|ABZ76523.1| GCN5-related N-acetyltransferase [Shewanella halifaxensis HAW-EB4]
          Length = 900

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++++A+L  Y +        ++   A    K    P+  +K Q               +D
Sbjct: 498 HESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPI-ALKLQ--------SPDIHYKSD 548

Query: 66  SKGGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            +G +   +S   V      ++   + +       G  V  + +  G    +E+ +++  
Sbjct: 549 IQGVMLNLTSDLEVEHAANAMIERVISVNPDARIEGLIVQKMALTAG---AQEIRVAVAN 605

Query: 125 DRTSGMVAFIASTQGGMDIE 144
           D   G    +   +GG + E
Sbjct: 606 DPVFGPAILLG--EGGSEWE 623


>gi|56419330|ref|YP_146648.1| carbamoyl phosphate synthase large subunit [Geobacillus
           kaustophilus HTA426]
 gi|56379172|dbj|BAD75080.1| carbamoyl-phosphate synthase(arginine-specific) large chain
           [Geobacillus kaustophilus HTA426]
          Length = 1042

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 66/187 (35%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +++SV  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMHELGEPVPESEIVTSVEEAVAFAEQIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  ++ + + L  +            ++   +E      +E+   ++ D+++
Sbjct: 180 GI--AENMEQFLALVEKGLNES-----------PIHQCLIERSVAGFKEIEYEVMRDQSN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRSSAVKIISALGIIG 279

Query: 182 QARIDGG 188
              I   
Sbjct: 280 GCNIQFA 286


>gi|283853618|ref|ZP_06370853.1| phosphoribosylamine/glycine ligase [Desulfovibrio sp. FW1012B]
 gi|283570980|gb|EFC19005.1| phosphoribosylamine/glycine ligase [Desulfovibrio sp. FW1012B]
          Length = 376

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A     +   AA + ++ +  P  VVK+   A G+             
Sbjct: 106 AKEVMAAAGVPTAAYETFTDARAARAYVEKIGAP-LVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +    ++ I E           G  G     V VE+        +L+   D  
Sbjct: 152 -GVTVALTTDEALAAIDE-------AMVKGAFGQAGATVVVEEALVGEEASFLAF-CDGK 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NAVPM 207


>gi|260436465|ref|ZP_05790435.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
           8109]
 gi|260414339|gb|EEX07635.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
           8109]
          Length = 1107

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS   AE+    +     +++     GG G G           
Sbjct: 133 KQAMERIGVKVCPSGIASSQEEAEAVGAAIGSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEYAAICK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS--K 67
           A+LR  N+   +  +  S   A +    +  P+ V  S +  G   +  F E   +   +
Sbjct: 705 AILRNLNIRQPRNGLARSEEEARAVATRVGYPVVVRPSYVLGGRAMEVVFDEEELNRYMR 764

Query: 68  GGVRVESS 75
             V+VE  
Sbjct: 765 EAVQVEPD 772


>gi|251788489|ref|YP_003003210.1| GCN5-related N-acetyltransferase [Dickeya zeae Ech1591]
 gi|247537110|gb|ACT05731.1| GCN5-related N-acetyltransferase [Dickeya zeae Ech1591]
          Length = 888

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 23/221 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLNTLPTWIAGDSTEAVYIAEKIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              ++ +G +    + + V      +L     T        RV+ + V+  A+    L L
Sbjct: 531 PHKSEIQGVMLYLQNAQEVQLAAEAMLERVRHTNPQA----RVHGLLVQGMANRTGALEL 586

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDM 176
            + V++ +     I   +GG +      +    +    ++  +     V +     +   
Sbjct: 587 RIAVEQDAIFGPLIMLGEGGTEWN---WETQAAVALPPLNMALARYLIVQALKSGKIRSQ 643

Query: 177 LELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
             L+         L   +     D  ++  L+I+PL+    
Sbjct: 644 NALKPLDIPALSRLLVQVSNLILDCPEIERLDIHPLLASGE 684


>gi|314966795|gb|EFT10894.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL082PA2]
 gi|314981133|gb|EFT25227.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL110PA3]
 gi|315093286|gb|EFT65262.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL060PA1]
 gi|327327622|gb|EGE69398.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL103PA1]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  S     + I G   I  +    G
Sbjct: 193 GKGLELSPVSECLVEQSIAGYKEIEYEMMRDG 224



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764


>gi|314923021|gb|EFS86852.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL001PA1]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  S     + I G   I  +    G
Sbjct: 193 GKGLELSPVSECLVEQSIAGYKEIEYEMMRDG 224



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764


>gi|150005296|ref|YP_001300040.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides vulgatus
           ATCC 8482]
 gi|294777133|ref|ZP_06742590.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides vulgatus
           PC510]
 gi|172048830|sp|A6L404|PURT_BACV8 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|149933720|gb|ABR40418.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides vulgatus
           ATCC 8482]
 gi|294449002|gb|EFG17545.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides vulgatus
           PC510]
          Length = 389

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 33/154 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A K +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKSLEELQEAAKEIGFPC-VVKPLMSSSGKGQSL--------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 158 --VKSADELEQAWHY-----------GCEGSRGD-IKELIIEEFIQFDSE--ITLLTVTQ 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
                      G +   +   DY +      IDP
Sbjct: 202 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDP 232


>gi|113867997|ref|YP_726486.1| Acyl-CoA synthetase (NDP forming) [Ralstonia eutropha H16]
 gi|113526773|emb|CAJ93118.1| Acyl-CoA synthetase (NDP forming) [Ralstonia eutropha H16]
          Length = 898

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 95/265 (35%), Gaps = 36/265 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA L  Y VPV      +SV  A      +  P+  +K                
Sbjct: 490 LTEPEAKAALAAYGVPVVATRTAASVDEAVGQATRIGYPV-ALKI--------LSPDITH 540

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYL 120
            + + G     +   +V S    +L    I +Q      R+    V+  A      EL +
Sbjct: 541 KSAAGGVALDLADAAAVRSAGSAMLER--IWQQAPEA--RLEGFTVQPMAGHGDGFELIV 596

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA---SLCDML 177
               D   G V       GG++ E +          + + PL  + ++D+     +  +L
Sbjct: 597 GAATDPVFGPVLLFG--HGGVNTEHIGDHA------VALPPLDALLAQDLVSRTRIGRLL 648

Query: 178 ----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
                  G        +   + +  CD  +++ L+INPL+    G +  LD++I+    A
Sbjct: 649 EGWHGHPGVDGDGLLQVLVQVSRLVCDIPEIAELDINPLLASATG-VIALDARIAIKAPA 707

Query: 233 ----LYRHLDIQELRDVSEEDSREI 253
               L      + L +  E+D R I
Sbjct: 708 PGTRLAIQPYPEALEERVEQDGRTI 732



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 32/164 (19%)

Query: 249 DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA---------------- 292
           D+ E+ A+   L    L      + NG G  +   D +   GG                 
Sbjct: 288 DAVEMLARMQGLRGERL----AILTNGGGAGVMATDALADAGGTLARLSDQTLARLDLVL 343

Query: 293 P-----ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG--GIMRCDVLVKGILSA 345
           P     AN +D+ G A  ++   A+ I+     V  +L+ I     I+    +   ++SA
Sbjct: 344 PATWPRANPIDIIGDAPVERYLQAYAILCEAPEVDAVLM-IHAPTAIVPAAEIAAALVSA 402

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
               K  +     L    V    RL   +G+   T    + A +
Sbjct: 403 PSGGKPLL--TAWLGADAVLQARRLCRHAGVP--TFDTPERAVR 442


>gi|83594218|ref|YP_427970.1| carbamoyl phosphate synthase large subunit [Rhodospirillum rubrum
           ATCC 11170]
 gi|83577132|gb|ABC23683.1| carbamoyl-phosphate synthase large subunit [Rhodospirillum rubrum
           ATCC 11170]
          Length = 1082

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 63/208 (30%), Gaps = 36/208 (17%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +RK  +   +  ++ S+  +  A++ +  P+ +  S    G  G   F     D      
Sbjct: 136 MRKIGLDCPRSALVHSIEESRQALEEIGLPVIIRPSFTLGGQGGGMAFNREEYDRIVASG 195

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + +S                           V  + VE+     +E  + ++ DR    +
Sbjct: 196 LAASP--------------------------VRQILVEESVLGWKEYEMEVVRDRADNCI 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARIDGGD 189
                      IE +          + + P + +T     V     +  L+      GG 
Sbjct: 230 IV-------CSIENIDPMGVHTGDSITVAPALTLTDKEYQVMRNASIACLREIGVETGGS 282

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                     D  + ++E+NP +   + 
Sbjct: 283 NVQFAVNP-KDGRLVVIEMNPRVSRSSA 309


>gi|15606668|ref|NP_214048.1| pyruvate carboxylase N-terminal domain-containing protein [Aquifex
           aeolicus VF5]
 gi|2983895|gb|AAC07446.1| pyruvate carboxylase n-terminal domain [Aquifex aeolicus VF5]
          Length = 472

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +++K  VPV  G   V+ S+  A++  + +  P+  +K+         G        
Sbjct: 118 SKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVL-LKA-------TAGGGGRGIRI 169

Query: 66  SKGGVRVESSLKSVISDIREILGS 89
            +    +  + +    +  +  G 
Sbjct: 170 CRNEEELVKNYEQASREAEKAFGR 193


>gi|31792578|ref|NP_855071.1| carbamoyl phosphate synthase large subunit [Mycobacterium bovis
           AF2122/97]
 gi|121637314|ref|YP_977537.1| carbamoyl phosphate synthase large subunit [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|215430269|ref|ZP_03428188.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis EAS054]
 gi|219557286|ref|ZP_03536362.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis T17]
 gi|224989789|ref|YP_002644476.1| carbamoyl phosphate synthase large subunit [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|260186320|ref|ZP_05763794.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis CPHL_A]
 gi|260204644|ref|ZP_05772135.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis K85]
 gi|289446979|ref|ZP_06436723.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis CPHL_A]
 gi|289569399|ref|ZP_06449626.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis T17]
 gi|289574050|ref|ZP_06454277.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis K85]
 gi|289753464|ref|ZP_06512842.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis EAS054]
 gi|59797844|sp|Q7U054|CARB_MYCBO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|31618167|emb|CAD94280.1| PROBABLE CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN CARB
           (Carbamoyl-phosphate synthetase ammonia chain)
           [Mycobacterium bovis AF2122/97]
 gi|121492961|emb|CAL71432.1| Probable carbamoyl-phosphate synthase large chain carB
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224772902|dbj|BAH25708.1| carbamoyl phosphate synthase large subunit [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|289419937|gb|EFD17138.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis CPHL_A]
 gi|289538481|gb|EFD43059.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis K85]
 gi|289543153|gb|EFD46801.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis T17]
 gi|289694051|gb|EFD61480.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis EAS054]
          Length = 1115

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 738


>gi|15840842|ref|NP_335879.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis CDC1551]
 gi|57116856|ref|YP_177804.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis H37Rv]
 gi|148661175|ref|YP_001282698.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis H37Ra]
 gi|148822604|ref|YP_001287358.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis F11]
 gi|215411028|ref|ZP_03419836.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215445567|ref|ZP_03432319.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis T85]
 gi|253799567|ref|YP_003032568.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis KZN 1435]
 gi|254231632|ref|ZP_04924959.1| carbamoyl-phosphate synthase large chain (ammonia chain) carB
           [Mycobacterium tuberculosis C]
 gi|254550397|ref|ZP_05140844.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|289554826|ref|ZP_06444036.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis KZN 605]
 gi|289757490|ref|ZP_06516868.1| carbamoyl-phosphate synthase subunit large subunit carB
           [Mycobacterium tuberculosis T85]
 gi|294994944|ref|ZP_06800635.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis 210]
 gi|297633937|ref|ZP_06951717.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis KZN 4207]
 gi|297730926|ref|ZP_06960044.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis KZN R506]
 gi|298524889|ref|ZP_07012298.1| carbamoyl-phosphate synthase large subunit (ammonia chain) carB
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306775565|ref|ZP_07413902.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu001]
 gi|306780713|ref|ZP_07419050.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu002]
 gi|306784113|ref|ZP_07422435.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu003]
 gi|306788480|ref|ZP_07426802.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu004]
 gi|306792805|ref|ZP_07431107.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu005]
 gi|306797206|ref|ZP_07435508.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu006]
 gi|306803087|ref|ZP_07439755.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu008]
 gi|306807283|ref|ZP_07443951.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu007]
 gi|306967481|ref|ZP_07480142.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu009]
 gi|306971674|ref|ZP_07484335.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu010]
 gi|307079384|ref|ZP_07488554.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu011]
 gi|307083952|ref|ZP_07493065.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu012]
 gi|313658259|ref|ZP_07815139.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis KZN V2475]
 gi|12229606|sp|P57689|CARB_MYCTU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|13881040|gb|AAK45693.1| carbamoyl-phosphate synthase, large subunit [Mycobacterium
           tuberculosis CDC1551]
 gi|38490262|emb|CAE55382.1| PROBABLE CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN CARB
           (Carbamoyl-phosphate synthetase ammonia chain)
           [Mycobacterium tuberculosis H37Rv]
 gi|124600691|gb|EAY59701.1| carbamoyl-phosphate synthase large chain (ammonia chain) carB
           [Mycobacterium tuberculosis C]
 gi|148505327|gb|ABQ73136.1| carbamoyl-phosphate synthase large subunit [Mycobacterium
           tuberculosis H37Ra]
 gi|148721131|gb|ABR05756.1| carbamoyl-phosphate synthase large subunit (ammonia chain) carB
           [Mycobacterium tuberculosis F11]
 gi|253321070|gb|ACT25673.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis KZN 1435]
 gi|289439458|gb|EFD21951.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis KZN 605]
 gi|289713054|gb|EFD77066.1| carbamoyl-phosphate synthase subunit large subunit carB
           [Mycobacterium tuberculosis T85]
 gi|298494683|gb|EFI29977.1| carbamoyl-phosphate synthase large subunit (ammonia chain) carB
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308215945|gb|EFO75344.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu001]
 gi|308326457|gb|EFP15308.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu002]
 gi|308331180|gb|EFP20031.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu003]
 gi|308334962|gb|EFP23813.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu004]
 gi|308338767|gb|EFP27618.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu005]
 gi|308342466|gb|EFP31317.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu006]
 gi|308346307|gb|EFP35158.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu007]
 gi|308350235|gb|EFP39086.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu008]
 gi|308354878|gb|EFP43729.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu009]
 gi|308358819|gb|EFP47670.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu010]
 gi|308362766|gb|EFP51617.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu011]
 gi|308366404|gb|EFP55255.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis SUMu012]
 gi|323720137|gb|EGB29241.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis CDC1551A]
 gi|326903007|gb|EGE49940.1| carbamoyl-phosphate synthase large subunit carB [Mycobacterium
           tuberculosis W-148]
 gi|328459315|gb|AEB04738.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis KZN 4207]
          Length = 1115

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 738


>gi|315187104|gb|EFU20861.1| phosphoribosylamine--glycine ligase [Spirochaeta thermophila DSM
           6578]
          Length = 414

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +R+Y V  A  ++  S+  A    +    P  V+K+   A G+             
Sbjct: 106 AKEFMRRYGVATADYLITDSLPEALKFAQRSDYP-LVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +        IL + +  +  G  G     V +E+  + +    LS+ 
Sbjct: 152 -GVTIVQNREE----AERILRAYMEERIFGEAG---TTVVLEEFLEGVEASILSIT 199


>gi|315103457|gb|EFT75433.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL050PA2]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  S     + I G   I  +    G
Sbjct: 193 GKGLELSPVSECLVEQSIAGYKEIEYEMMRDG 224



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764


>gi|282854052|ref|ZP_06263389.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes J139]
 gi|282583505|gb|EFB88885.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes J139]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  S     + I G   I  +    G
Sbjct: 193 GKGLELSPVSECLVEQSIAGYKEIEYEMMRDG 224



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764


>gi|269127222|ref|YP_003300592.1| carbamoyl-phosphate synthase large subunit [Thermomonospora curvata
           DSM 43183]
 gi|268312180|gb|ACY98554.1| carbamoyl-phosphate synthase, large subunit [Thermomonospora
           curvata DSM 43183]
          Length = 1107

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  K    +S   A      +  P+ V  S +  G   +  + +    S   
Sbjct: 684 RVLERAGLPAPKHGTATSFEEARKIAAEIGYPVLVRPSYVLGGRGMEIVYDDATLQSYMA 743

Query: 70  VRVESSLK 77
              E S +
Sbjct: 744 KATEVSPE 751


>gi|258404359|ref|YP_003197101.1| phosphoribosylamine/glycine ligase [Desulfohalobium retbaense DSM
           5692]
 gi|257796586|gb|ACV67523.1| phosphoribosylamine/glycine ligase [Desulfohalobium retbaense DSM
           5692]
          Length = 427

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+L+R+  VP A   V      A   ++    P+ V+K+   A G+             
Sbjct: 106 AKSLMREAEVPTADFEVFDDFDTAWDYVRQQEFPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +     ++E++   +     G  G   N V +E+  +     +++   D  
Sbjct: 152 -GVVLAHTAEEAKQTLQEMMEERVF----GTAG---NRVVIEEALEGEEASFMAF-CDGL 202

Query: 128 SGMVA 132
           +    
Sbjct: 203 TVRPL 207


>gi|255570982|ref|XP_002526442.1| phosphoribosylamine-glycine ligase, putative [Ricinus communis]
 gi|223534222|gb|EEF35937.1| phosphoribosylamine-glycine ligase, putative [Ricinus communis]
          Length = 534

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+L  KY +P AK    +   AA+  I+    P+ V+K+   A G+              
Sbjct: 207 KSLCDKYKIPTAKYKTFTDPFAAKEYIQAEGAPI-VIKADGLAAGK-------------- 251

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V  +L+     +  +L    +    G  G RV    VE+  +     + +L+
Sbjct: 252 GVIVAMTLEEANEAVDSML----VKGAFGSAGCRV---IVEEYLEGEEASFFALV 299


>gi|78213340|ref|YP_382119.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           CC9605]
 gi|78197799|gb|ABB35564.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
           CC9605]
          Length = 1107

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS   AE+    +     +++     GG G G           
Sbjct: 133 KQAMERIGVKVCPSGIASSQEEAEAVGAAIGSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEYAAICK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268



 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS--K 67
           A+LR  N+   +  +  S   A +    +  P+ V  S +  G   +  F E   +   +
Sbjct: 705 AILRDLNIRQPRNGLARSEEEARAVATRVGYPVVVRPSYVLGGRAMEVVFDEEELNRYMR 764

Query: 68  GGVRVESS 75
             V+VE  
Sbjct: 765 EAVQVEPD 772


>gi|328951022|ref|YP_004368357.1| carbamoyl-phosphate synthase, large subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451346|gb|AEB12247.1| carbamoyl-phosphate synthase, large subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 1030

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 43/191 (22%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA   +RK  V V +G ++ S+    +  + +  P+ V               +     
Sbjct: 132 FQAA--MRKIGVEVPRGKMVHSLEEGLAFAREVGYPVVV---------------RPSFTL 174

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G     S +  I  +   L  +            V+   VE+     +E  L ++ D
Sbjct: 175 GGTGGGFAHSEEEFIRVLTAGLQQS-----------PVHTALVEESILGWKEYELEVMRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLE 178
             +  V  I S      IE +          + + P   +T        +   ++   + 
Sbjct: 224 -HADTVVIITS------IENLDPMGVHTGDSITVAPAQTLTDVEYQRMRDAARAIIREIG 276

Query: 179 LQ-GQARIDGG 188
           +  G + I   
Sbjct: 277 VDTGGSNIQFA 287



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 15/73 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P  KG V      A+   +TL  PL V  S +  G                 ++V  +
Sbjct: 685 GIPQPKGAVARDPLHAQELAETLGYPLMVRPSYVLGG---------------RAMQVVRT 729

Query: 76  LKSVISDIREILG 88
            + +   + E+ G
Sbjct: 730 PEELRRYLAEVYG 742


>gi|291521241|emb|CBK79534.1| carbamoyl-phosphate synthase large subunit [Coprococcus catus GD/7]
          Length = 1074

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 27/69 (39%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +A++ K ++P+ +  + ++V  A      +  P+ V  S +  G   +  + +       
Sbjct: 672 RAMMEKLDIPMPESGMATTVDEALEIANKIGYPVMVRPSYVLGGRGMEVVYDDESMAGYM 731

Query: 69  GVRVESSLK 77
              V  +  
Sbjct: 732 AAAVGVTPD 740


>gi|254364273|ref|ZP_04980319.1| carbamoyl-phosphate synthase large chain (ammonia chain) carB
           [Mycobacterium tuberculosis str. Haarlem]
 gi|134149787|gb|EBA41832.1| carbamoyl-phosphate synthase large chain (ammonia chain) carB
           [Mycobacterium tuberculosis str. Haarlem]
          Length = 1115

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 738


>gi|33863094|ref|NP_894654.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
           str. MIT 9313]
 gi|33635011|emb|CAE20997.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9313]
          Length = 1102

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS+  AE   + +     +++     GG G G           
Sbjct: 133 KQAMERIGVNVCPSGIASSLKEAEEVGEVINSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L ++            V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFAAICKSGLDAS-----------PVSQILIEKSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDAMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|255009219|ref|ZP_05281345.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           3_1_12]
 gi|313146967|ref|ZP_07809160.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           3_1_12]
 gi|313135734|gb|EFR53094.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           3_1_12]
          Length = 388

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A   +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYYYAKSLEELKEAAAKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+  + L+                  +G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSAAELEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|150400482|ref|YP_001324248.1| carbamoyl-phosphate synthase L chain ATP-binding [Methanococcus
           aeolicus Nankai-3]
 gi|150013185|gb|ABR55636.1| Carbamoyl-phosphate synthase L chain ATP-binding [Methanococcus
           aeolicus Nankai-3]
          Length = 479

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 32/139 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K       PV K   + S+  A  A++ L  P+ V  +    G            
Sbjct: 128 RELFNKAMDEIGEPVTKSYAVESIEKALEAVEELGYPVIVRPAFTLGG------------ 175

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +   + + L  ++           +N V +++     +E    ++ 
Sbjct: 176 -TGGGI--PYTEEELRDIVEKGLNYSM-----------INQVLIDESVLGWKEYEYEVM- 220

Query: 125 DRTSGMVAFIASTQGGMDI 143
            R +     I      +D 
Sbjct: 221 -RDAKDNCIIVCNMENIDP 238


>gi|67970403|dbj|BAE01544.1| unnamed protein product [Macaca fascicularis]
          Length = 272

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWKAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S +     ++EI    +  K  G  G     + +E+  D
Sbjct: 157 -GVIVAKSKEEACKAVQEI----MQEKAFGAAG---ETIVIEELLD 194


>gi|332292841|ref|YP_004431450.1| carbamoyl-phosphate synthase, large subunit [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332170927|gb|AEE20182.1| carbamoyl-phosphate synthase, large subunit [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 950

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P  +  V  +   A +    L  P+ V  S +  G                G+
Sbjct: 690 LLKDLNIPYPEFDVAETADEALAVAAKLDYPILVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  +   +   + ++L   
Sbjct: 735 KIVINDNELEEHVVDLLRKI 754


>gi|309776348|ref|ZP_07671336.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915944|gb|EFP61696.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 1071

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++   +L K N+P  +G     V  A S    +  P+ V  S +  GGR     + + 
Sbjct: 668 HEFE--EMLHKLNIPQPQGETAVEVEEAVSIANRIGYPVLVRPSYVL-GGRAM---EIVH 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            D    V + +++K +  D   ++   +I K+ 
Sbjct: 722 NDDDLRVYMATAVKEISHDAPILVDKYIIGKEM 754



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 53/184 (28%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+ +   PV + V++ ++  A +  ++   P+ V               +        
Sbjct: 133 RELMYEIGEPVPESVIVHTIEEAVAFAESNGYPVVV---------------RPAFTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     S + + +               G   S V+   +E      +E+   ++  R +
Sbjct: 178 GGGFAHSEEELRTIC-----------DNGLKISPVHQCLIEQSIAGYKEIEYEVM--RDN 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQAR 184
              A +      +D   V       I         D   G+       +   L++ G   
Sbjct: 225 ADNAIVVCNMENVDP--VGIHTGDSIVVAPTQTLTDRECGIMRASALKIIRALKICGGCN 282

Query: 185 IDGG 188
           +   
Sbjct: 283 VQLA 286


>gi|147678144|ref|YP_001212359.1| carbamoylphosphate synthase large subunit [Pelotomaculum
           thermopropionicum SI]
 gi|146274241|dbj|BAF59990.1| carbamoylphosphate synthase large subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 809

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P   G    SV  A +    +  P+ V  S +  G
Sbjct: 676 KLLIELGIPKPPGRTAFSVEEAYAIASEIGFPVLVRPSYVLGG 718


>gi|126567325|emb|CAL47311.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETILDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVK 347
           +  ++ I G I+    + K   GI+ A +
Sbjct: 61  RDKIMIIGGAIVNFTDVAKTFTGIIQAFE 89


>gi|121611886|ref|YP_999693.1| cyanophycin synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121556526|gb|ABM60675.1| cyanophycin synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 890

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    VPV  G  + S+  A      +  P+ V+K Q   G +GKG    +   ++
Sbjct: 237 KRLLHAAGVPVPLGQPVHSIGQAWDVALQVGLPV-VLKPQ--DGNQGKGVTVNIGERAQ 292


>gi|86158006|ref|YP_464791.1| S6 modification enzyme RimK [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774517|gb|ABC81354.1| S6 modification enzyme RimK [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 313

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 18/103 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    VPV + V+ S     +   + + G   +VK               L    K G
Sbjct: 105 QMLSAAGVPVPRTVMASDPSGLKDMARLVGGVPVLVK--------------LLSTSEKSG 150

Query: 70  VRVESSLKSVISDIREI--LGSTLITKQ--TGPTGSRVNCVYV 108
           V +  +L+S+ + +  I  LG  ++ +Q   G  G  +  + V
Sbjct: 151 VMICETLQSLEAALEAILGLGQNIVVQQYLKGAKGRDLRALVV 193


>gi|315149813|gb|EFT93829.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0012]
          Length = 415

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGLPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +D +  L + +  +Q G +G  V    +E+     +E  L   V   
Sbjct: 156 --------VAETKADAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GKEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|300784326|ref|YP_003764617.1| acetyl-CoA synthetase [Amycolatopsis mediterranei U32]
 gi|299793840|gb|ADJ44215.1| acetyl-CoA synthetase [Amycolatopsis mediterranei U32]
          Length = 893

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y + +    ++S+V  A +A   L  P+ +        GR       L   S+  
Sbjct: 675 RLLDCYGIGIVPFRIVSTVDEAVAAAGELGYPVTLKAVDERLRGRPDLAGVRLDLASEDS 734

Query: 70  VRVES-SLKSV 79
           VR    +L+ V
Sbjct: 735 VRTAYETLREV 745


>gi|261415222|ref|YP_003248905.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261371678|gb|ACX74423.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 889

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L RK      +P+ +  + +++  A + +K + G   +++     GGRG
Sbjct: 484 RDLFRKMMDQLGIPMPESGMATNIDEALACVKQIGGYPVMIRPSFVLGGRG 534


>gi|215426711|ref|ZP_03424630.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           tuberculosis T92]
          Length = 1001

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 580 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 624


>gi|167748028|ref|ZP_02420155.1| hypothetical protein ANACAC_02766 [Anaerostipes caccae DSM 14662]
 gi|167652546|gb|EDR96675.1| hypothetical protein ANACAC_02766 [Anaerostipes caccae DSM 14662]
          Length = 423

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A + ++T+  P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTASYENFTDPEQALAYLETVKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L+   + ++ +    ++ KQ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICETLEEAKAGVKTL----MLDKQFGDAG---NEIVIEEFMTGRE---VSVLAFCD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIRCMTSAQD 212


>gi|161505337|ref|YP_001572449.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866684|gb|ABX23307.1| hypothetical protein SARI_03482 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 433

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 158 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|163785883|ref|ZP_02180341.1| hypothetical protein HG1285_07717 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159878848|gb|EDP72894.1| hypothetical protein HG1285_07717 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 337

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 15/133 (11%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + EY+ K +L+ Y VP+ K V++ +V         +  P+    S      + +     L
Sbjct: 159 LTEYETKKVLQSYGVPINKTVLLKNVEEINQ--LEINFPVVAKISSPDILHKTEAGGVIL 216

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             ++K  ++     + +I + ++               +++  +  E+  +   EL +  
Sbjct: 217 NIENKQQLKKAF--EEIIENAKK-----------YKKDAKIEGIIAEEQVEKGFELIIGS 263

Query: 123 LVDRTSGMVAFIA 135
             D+         
Sbjct: 264 ARDKLFRQYLMFG 276


>gi|126567329|emb|CAL47313.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 92

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 11/89 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG          + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGINDLANYGEYSGGPTTGVTKFYAETLLDLMTREPDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVK 347
           +G ++ I G I     + K   GI+ A +
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFE 89


>gi|323144211|ref|ZP_08078846.1| phosphoribosylamine--glycine ligase [Succinatimonas hippei YIT
           12066]
 gi|322416052|gb|EFY06751.1| phosphoribosylamine--glycine ligase [Succinatimonas hippei YIT
           12066]
          Length = 427

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+++N+P A   +  +   A + IK    P+ V+K+   A G+              
Sbjct: 109 KDFLKRHNIPTAAYEIFDNAEKACAYIKEQGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +    IS +  +L         G  G+RV    +E+  +   E    ++ D  +
Sbjct: 154 GVVVAMTEDEAISAVHSMLD----DHAFGNAGARV---VIEEFME-GEEASFIVMSDSIN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 ALPM 209


>gi|289749938|ref|ZP_06509316.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis T92]
 gi|289690525|gb|EFD57954.1| carbamoyl-phosphate synthase subunit large carB [Mycobacterium
           tuberculosis T92]
          Length = 998

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 577 DLLSAAGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 621


>gi|115379472|ref|ZP_01466569.1| argininosuccinate lyase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363523|gb|EAU62661.1| argininosuccinate lyase domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 366

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++A+ALLR   +P  +  VI+S   A    +T+  P  V               K     
Sbjct: 63  HEARALLRAAGLPGPEFHVIASEAEAAQLAQTVRFPCVV---------------KPPAES 107

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN-CVYVEDGAD 113
              GVR   + + +++        +L ++     G  ++  V VE   +
Sbjct: 108 GSTGVRRVDTPEELLAH-----FRSLHSRAANERGQSLHGEVLVESFLE 151


>gi|325686169|gb|EGD28219.1| carbamoyl-phosphate synthase [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 1066

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +   KG  + +   A  A   L  P+ V  S +  G
Sbjct: 673 EILEKCQIDRPKGQTVFTAEEALKAANELGYPVLVRPSYVLGG 715



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L+ +   PVAK VV++ V  A +  K +  P+ V  +    G
Sbjct: 133 KNLMERIGEPVAKSVVVNYVEDAIAFAKEIGYPVVVRPAYTLGG 176


>gi|313123764|ref|YP_004034023.1| carbamoyl-phosphate synthase large subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280327|gb|ADQ61046.1| Carbamoyl-phosphate synthase large subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 1066

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +   KG  + +   A  A   L  P+ V  S +  G
Sbjct: 673 EILEKCQIDRPKGQTVFTAEEALKAANELGYPVLVRPSYVLGG 715



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L+ +   PVAK VV++ V  A +  K +  P+ V  +    G
Sbjct: 133 KNLMERIGEPVAKSVVVNYVEDAIAFAKEIGYPVVVRPAYTLGG 176


>gi|282899734|ref|ZP_06307697.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Cylindrospermopsis raciborskii CS-505]
 gi|281195349|gb|EFA70283.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Cylindrospermopsis raciborskii CS-505]
          Length = 1083

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 32/166 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + K  V V      SS+  +++  + +     +++     GG G G              
Sbjct: 136 MEKIGVNVCPSGTASSLEESKAIAQRIGSYPLIIRPAFTMGGTGGG-------------- 181

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  + +                 Q G   S V+ + ++      +E  L ++ D  +  V
Sbjct: 182 IAYNKEEFELMA-----------QVGIDASPVSQILIDQSLLGWKEYELEVMRD-LADNV 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             I S      IE +          + + P   +T ++   L DM 
Sbjct: 230 VIICS------IENLDPMGIHTGDSITVAPAQTLTDKEYQRLRDMA 269


>gi|254883766|ref|ZP_05256476.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           4_3_47FAA]
 gi|254836559|gb|EET16868.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           4_3_47FAA]
          Length = 389

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 37/156 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A K +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKSLEELQEAAKEIGFPC-VVKPLMSSSGKGQS---------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSR--VNCVYVEDGADILRELYLSLLVD 125
               +  S+  +                 G  GSR  +  + +E+      E  ++LL  
Sbjct: 157 ----LVKSVDELEQA-----------WHYGCEGSRGDIKELIIEEFIQFDSE--ITLLTV 199

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
                        G +   +   DY +      IDP
Sbjct: 200 TQKNGPTLFCPPIGHV---QKGGDYRESFQPAHIDP 232


>gi|91978565|ref|YP_571224.1| phosphoribosylamine--glycine ligase [Rhodopseudomonas palustris
           BisB5]
 gi|91685021|gb|ABE41323.1| phosphoribosylamine--glycine ligase [Rhodopseudomonas palustris
           BisB5]
          Length = 427

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 15/83 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L + + +P A     S    A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDLCKAHGIPTAAYERFSDPDEAKAYIRVQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTL 91
           GV V  +L    + +  I G  L
Sbjct: 152 GVVVAMTLAEAEAAVDMIFGGAL 174


>gi|295095111|emb|CBK84201.1| phosphoribosylamine--glycine ligase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 430

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|158313546|ref|YP_001506054.1| carbamoyl phosphate synthase large subunit [Frankia sp. EAN1pec]
 gi|158108951|gb|ABW11148.1| carbamoyl-phosphate synthase, large subunit [Frankia sp. EAN1pec]
          Length = 1136

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P     V +S   A +    +  P+ V  S +  GGRG
Sbjct: 673 QVLAAAGLPSPPHGVATSYAEARTVADRIGYPVLVRPSYVL-GGRG 717



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 53/171 (30%), Gaps = 34/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K ++   +   A+  + ++V     A +    P+ V  S    G             
Sbjct: 130 QAFKDIVASVDGETARSAICTTVAECLVAAEEFSYPVVVRPSYTLGG------------- 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G         +     + L ++  T+           V VE+     +E  L L+ D
Sbjct: 177 --AGSGFAHDPDELRRMSADGLAASPTTE-----------VLVEESVLGWKEFELELMRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           R   +V           IE +          + + P + +T  +   + DM
Sbjct: 224 RADNVVVV-------CSIENIDPMGVHTGDSVTVAPAMTLTDREYQRMRDM 267


>gi|152972867|ref|YP_001338013.1| phosphoribosylamine--glycine ligase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238892481|ref|YP_002917215.1| phosphoribosylamine--glycine ligase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262043754|ref|ZP_06016857.1| phosphoribosylamine-glycine ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150957716|gb|ABR79746.1| phosphoribosylamine--glycine ligase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238544797|dbj|BAH61148.1| phosphoribosylamine--glycine ligase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259038878|gb|EEW40046.1| phosphoribosylamine-glycine ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 431

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVKDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|330813629|ref|YP_004357868.1| phosphoribosylamine--glycine ligase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486724|gb|AEA81129.1| phosphoribosylamine--glycine ligase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 420

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 45/173 (26%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L + +N+P A+     ++  A+  IK    P  V+KS   A G+              
Sbjct: 107 KKLCKDFNIPTAEYESFDNLLKAQDFIKKSKHP-LVIKSDGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV + ++++      +EIL     T          + V +E+  +     Y  ++ D  +
Sbjct: 152 GVTISNNVEESTKCAKEILEGKFKTS---------SKVVIEEFLEGEEASYF-VITDGEN 201

Query: 129 GMVAFIASTQGGMDIEEVA------------------KDYPQKIFKLLIDPLI 163
            +   I + Q    I E                     D  +KI K +I+P I
Sbjct: 202 YLP--IGTAQDHKRIGENDTGLNTGGMGAYSPSLLITNDMQEKINKKIIEPTI 252


>gi|325280817|ref|YP_004253359.1| Phosphoribosylamine--glycine ligase [Odoribacter splanchnicus DSM
           20712]
 gi|324312626|gb|ADY33179.1| Phosphoribosylamine--glycine ligase [Odoribacter splanchnicus DSM
           20712]
          Length = 434

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 25/107 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPG--PLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++ +P   G +  +    +   + L    P YV+K+   A G+           
Sbjct: 110 AKQFMIRHGIPT-AGYMTVTPDRVKEGQQFLATLRPPYVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
              GV +   L+    ++ E+LG           G   + V +E+  
Sbjct: 158 ---GVLILPELEEAQRELEEMLGGKF--------GKASSRVVIEEFL 193


>gi|220917470|ref|YP_002492774.1| alpha-L-glutamate ligase, RimK family [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955324|gb|ACL65708.1| alpha-L-glutamate ligase, RimK family [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 313

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 18/103 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    VPV + V+ S     +   + + G   +VK               L    K G
Sbjct: 105 QMLSAAGVPVPRTVMASDPSGLKDMARLVGGVPVLVK--------------LLSTSEKSG 150

Query: 70  VRVESSLKSVISDIREI--LGSTLITKQ--TGPTGSRVNCVYV 108
           V +  +L+S+ + +  I  LG  ++ +Q   G  G  +  + V
Sbjct: 151 VMICETLQSLEAALEAILGLGQNIVVQQYLKGAKGRDLRALVV 193


>gi|197122687|ref|YP_002134638.1| alpha-L-glutamate ligase, RimK family [Anaeromyxobacter sp. K]
 gi|196172536|gb|ACG73509.1| alpha-L-glutamate ligase, RimK family [Anaeromyxobacter sp. K]
          Length = 313

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 18/103 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    VPV + V+ S     +   + + G   +VK               L    K G
Sbjct: 105 QMLSAAGVPVPRTVMASDPSGLKDMARLVGGVPVLVK--------------LLSTSEKSG 150

Query: 70  VRVESSLKSVISDIREI--LGSTLITKQ--TGPTGSRVNCVYV 108
           V +  +L+S+ + +  I  LG  ++ +Q   G  G  +  + V
Sbjct: 151 VMICETLQSLEAALEAILGLGQNIVVQQYLKGAKGRDLRALVV 193


>gi|163788913|ref|ZP_02183358.1| carbamoyl-phosphate synthase large subunit [Flavobacteriales
           bacterium ALC-1]
 gi|159876150|gb|EDP70209.1| carbamoyl-phosphate synthase large subunit [Flavobacteriales
           bacterium ALC-1]
          Length = 951

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 15/77 (19%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +L++ N+P  +  V  S   A +    L  P+ V  S +  G                G+
Sbjct: 690 ILKENNIPYPEFDVAESADEALAIADVLNFPILVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREIL 87
           ++  + + + + + ++L
Sbjct: 735 KIVINKEELEAHVIDLL 751


>gi|322376823|ref|ZP_08051316.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           M334]
 gi|321282630|gb|EFX59637.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           M334]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|322392194|ref|ZP_08065655.1| carbamoylphosphate synthase large subunit [Streptococcus peroris
           ATCC 700780]
 gi|321144729|gb|EFX40129.1| carbamoylphosphate synthase large subunit [Streptococcus peroris
           ATCC 700780]
          Length = 388

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFQKAGVPVVPGAVIETEADVDKAVKEIGLPM 150


>gi|297538642|ref|YP_003674411.1| cyanophycin synthetase [Methylotenera sp. 301]
 gi|297257989|gb|ADI29834.1| cyanophycin synthetase [Methylotenera sp. 301]
          Length = 856

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    V V  G  +S++  A +A+  + GP+ VVK +   G +GKG    +    + 
Sbjct: 209 KKLLDAAGVAVPFGREVSTIEEAWAAMLEIAGPV-VVKPK--DGNQGKGVTVNIVTREQL 265

Query: 69  GVRVESSLKSVISDIREILGSTLITK 94
                    +      E+L    IT 
Sbjct: 266 NDAFV----AASKISSEVLVERFITG 287


>gi|160878245|ref|YP_001557213.1| D-alanine--D-alanine ligase [Clostridium phytofermentans ISDg]
 gi|160426911|gb|ABX40474.1| D-alanine--D-alanine ligase [Clostridium phytofermentans ISDg]
          Length = 340

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 31/181 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +++K+ +     +V       +   KTL  P  +               K L   S 
Sbjct: 144 SKVIMQKHGIETPDYIVADLTEE-QELEKTLMLPCVI---------------KPLSCGSS 187

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +         LG  L   +        N V +E+   + RE  + +L    
Sbjct: 188 VGVSIVRSQEE--------LGKALDYAKKYE-----NKVLIEE-LIVGREFSVGILNHHA 233

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQARID 186
             ++  I  T       +       ++    ++  I +   E    + ++L+L   +R+D
Sbjct: 234 LPLIEIIPKTGFYDYTNKYQAGMATEVCPAQLEDEISIKMQEAALKVHEVLQLGFYSRVD 293

Query: 187 G 187
            
Sbjct: 294 F 294


>gi|46580631|ref|YP_011439.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120602062|ref|YP_966462.1| pyruvate carboxylase [Desulfovibrio vulgaris DP4]
 gi|46450050|gb|AAS96699.1| acetyl-CoA carboxylase, biotin carboxylase, putative [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120562291|gb|ABM28035.1| Pyruvate carboxylase [Desulfovibrio vulgaris DP4]
 gi|311234362|gb|ADP87216.1| Pyruvate carboxylase [Desulfovibrio vulgaris RCH1]
          Length = 471

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 66/230 (28%), Gaps = 33/230 (14%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K L R   VP   G    I     AE   ++L       + Q   G R      +  A  
Sbjct: 125 KRLARSLGVPTVPGSDKPIYDELEAEKVAQSL------YEFQEQQGIRRPLVLVKASAGG 178

Query: 67  KG-GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G G+     L    S  R I    L  +Q    G     V +E        L + ++ D
Sbjct: 179 GGMGIEEVYDLDLFKSVYRRIRNYAL--RQFKDEG-----VLIEQRIRDFNHLEVQIVSD 231

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS--------LCDML 177
           RT        +    +    + K               G  +  V          +   +
Sbjct: 232 RTGRNPVHFGTRNCSIQSIGLQKRIEVAPGFDPTSIEYGFDAAQVLRDITYHSLAMARKV 291

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
                   +        +    D    L+E+N  I ++NG +    ++++
Sbjct: 292 GYDNVGTWE--------WIVTRDGHPFLMEVNTRIQVENG-VSARIARVN 332


>gi|330834697|ref|YP_004409425.1| CoA-binding domain-containing protein [Metallosphaera cuprina Ar-4]
 gi|329566836|gb|AEB94941.1| CoA-binding domain-containing protein [Metallosphaera cuprina Ar-4]
          Length = 660

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 70/231 (30%), Gaps = 44/231 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y    L+  Y +   K  +  S   A+    ++  P+ +               + +   
Sbjct: 466 YDGLKLMELYGIRTPKWGLAESYEDAQRIADSIGYPVVM----------KISTDQPVHKT 515

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +     ++     ++                   V +++      E Y+  + D
Sbjct: 516 ELKGVYMNVERDAIKDTFSKLT-------------KISKRVMIQEQLT-GLEAYVGGIKD 561

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL------ 179
                  F     G   +  V   Y + +  +       V  ++   +    +L      
Sbjct: 562 -----PVF-----GHTVVVGVGGIYLEVLKSVSYGIAP-VYEDEAVEMVKESKLLDMITA 610

Query: 180 --QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
             +G  +        N+ +   D ++  ++INPLI+   G    +D ++ F
Sbjct: 611 RKRGYDQGSLIRTVSNVSRLILDLNVKEMDINPLIVNDKGAF-AVDVRVVF 660


>gi|325577664|ref|ZP_08147939.1| phosphoribosylamine-glycine ligase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160409|gb|EGC72535.1| phosphoribosylamine-glycine ligase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 427

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIIMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|309800594|ref|ZP_07694739.1| carbamoyl-phosphate synthase, large subunit [Streptococcus infantis
           SK1302]
 gi|308115774|gb|EFO53305.1| carbamoyl-phosphate synthase, large subunit [Streptococcus infantis
           SK1302]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  ++++V  A +   T+  P+ V
Sbjct: 133 KQLMEELNQPIPESEIVNTVEEAVAFAATIGYPVIV 168


>gi|291531444|emb|CBK97029.1| carbamoyl-phosphate synthase large subunit [Eubacterium siraeum
           70/3]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +P  KG  + +   A  A   L  P+ +  S +  G
Sbjct: 674 ELLEKCKIPRPKGHTVFTTEEALKAANELGYPVLLRPSYVLGG 716


>gi|227496885|ref|ZP_03927148.1| phosphoribosylamine--glycine ligase [Actinomyces urogenitalis DSM
           15434]
 gi|226833619|gb|EEH66002.1| phosphoribosylamine--glycine ligase [Actinomyces urogenitalis DSM
           15434]
          Length = 417

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +++   VP A+  V ++    E+A      P YVVK    A G+G    ++  A   
Sbjct: 106 AKEVMQAAGVPTAEAAVCTTQAELEAAFDRFGAP-YVVKDDGLAAGKGVVVTEDRAAALA 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            G+    + +     + + L    ++      G+ V  +      D  R
Sbjct: 165 HGL-ACLAKEGGRVVVEDYLDGPEVSLFCVCDGATVRPL--APAQDFKR 210


>gi|28871385|ref|NP_794004.1| urea amidolyase-like protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28854636|gb|AAO57699.1| urea amidolyase-related protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 1226

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPLLEGTELLDSLESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   + +       
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPEGMADELCAAAIKLAKAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|71908878|ref|YP_286465.1| cyanophycin synthetase [Dechloromonas aromatica RCB]
 gi|71848499|gb|AAZ47995.1| Cyanophycin synthetase [Dechloromonas aromatica RCB]
          Length = 857

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K LL    V V  G  +     A  A + +  P+ VVK Q   G +GKG    L  + +
Sbjct: 209 KKLLHASGVAVPYGRPVEDEDDAWVAAQEVGLPV-VVKPQ--DGNQGKGISVNLTTEEQ 264


>gi|83311656|ref|YP_421920.1| hypothetical protein amb2557 [Magnetospirillum magneticum AMB-1]
 gi|82946497|dbj|BAE51361.1| Hypothetical protein yfiQ [Magnetospirillum magneticum AMB-1]
          Length = 903

 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 82/242 (33%), Gaps = 42/242 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E +AKA+L  Y +P  +  V  S   A      +  P+ +                 L
Sbjct: 492 LNEPEAKAVLEAYGIPTVETHVARSPALAGKIAMAMKVPVAL----------KILSPDIL 541

Query: 63  PADSKGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-------- 113
                GGV +       V      +L              RV  VY E   D        
Sbjct: 542 HKSDVGGVMLNLQGAFEVEKAAHAML-------------ERVKEVYPEARIDGFTVQTMA 588

Query: 114 ---ILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED- 169
                +EL   +  D   G    +   QGG+ +E V  D    +  L ++    V S   
Sbjct: 589 RRPGAQELICGVATDPVFG-PVIMF-GQGGIAVE-VIADRAMALPPLNMNLAAEVISRTR 645

Query: 170 VASLCDMLELQGQARIDGGDL-FPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS 227
           V+ L +    +  A  +   L    L +   D  ++  L+INPL     G +  LD+++ 
Sbjct: 646 VSRLLEGYRGRPPANKEAIQLALVQLSQLVVDFPEIVELDINPLFADAQG-VLALDARMV 704

Query: 228 FD 229
            +
Sbjct: 705 VE 706


>gi|330005101|ref|ZP_08305111.1| phosphoribosylamine--glycine ligase [Klebsiella sp. MS 92-3]
 gi|328536434|gb|EGF62787.1| phosphoribosylamine--glycine ligase [Klebsiella sp. MS 92-3]
          Length = 431

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVKDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|302132807|ref|ZP_07258797.1| urea amidolyase-related protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 1226

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPLLEGTELLDSLESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   + +       
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPEGMADELCAAAIKLAKAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|237736996|ref|ZP_04567477.1| phosphoribosylamine-glycine ligase [Fusobacterium mortiferum ATCC
           9817]
 gi|229420858|gb|EEO35905.1| phosphoribosylamine-glycine ligase [Fusobacterium mortiferum ATCC
           9817]
          Length = 417

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  A   V +    A+  IKT   P  VVK+   A G+             
Sbjct: 106 AKDFMKKYGVKTAAYEVFNEADKAKEYIKTCEFP-LVVKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +L+  +  + EI    +I K     G     + VE+  D +    LS+ 
Sbjct: 152 -GVLICQNLEEALKAVDEI----MIDKVFSSAG---EQIVVEEFLDGVEASILSVT 199


>gi|242280892|ref|YP_002993021.1| phosphoribosylamine/glycine ligase [Desulfovibrio salexigens DSM
           2638]
 gi|242123786|gb|ACS81482.1| phosphoribosylamine/glycine ligase [Desulfovibrio salexigens DSM
           2638]
          Length = 423

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 22/111 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +R   VP A   V      A+  ++    P+ VVK+   A G+              GV 
Sbjct: 110 MRDSGVPTAPFQVFDEYEQAKKFVEEKGAPI-VVKADGLAAGK--------------GVV 154

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
           V  +++  +  + ++    ++ K  G  G     V VE+        +L+ 
Sbjct: 155 VAGTVEEALESLDDM----MVKKIFGTAG---ERVVVEEALKGEEASFLAF 198


>gi|213971144|ref|ZP_03399263.1| urea amidolyase-related protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301381839|ref|ZP_07230257.1| urea amidolyase-related protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|213924133|gb|EEB57709.1| urea amidolyase-related protein [Pseudomonas syringae pv. tomato
           T1]
          Length = 1226

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPLLEGTELLDSLESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   + +       
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPEGMADELCAAAIKLAKAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|167044574|gb|ABZ09247.1| putative CoA-binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG7F11]
          Length = 640

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            Y  P+ K ++  +   A  +   +  P+ +               + +     GGV+V 
Sbjct: 498 SYGFPLPKNILAKTEDEAVESANKIGYPVVM----------KIASPQIVHKSDAGGVKVN 547

Query: 74  -SSLKSVISDIREILGS 89
            ++ +   +  +EI+G+
Sbjct: 548 LTNDEEARNAFKEIVGN 564


>gi|197927388|ref|NP_001011899.2| trifunctional purine biosynthetic protein adenosine-3 [Rattus
           norvegicus]
 gi|149059850|gb|EDM10733.1| phosphoribosylglycinamide formyltransferase, isoform CRA_a [Rattus
           norvegicus]
          Length = 1010

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ VP A+    +S   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGVPTAQWRAFTSPEDACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  S       ++EI+
Sbjct: 157 -GVIVAKSKAEACEAVQEIM 175


>gi|47169244|pdb|1ULZ|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit Of
           Pyruvate Carboxylase
          Length = 451

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +++K  VPV  G   V+ S+  A++  + +  P+  +K+         G        
Sbjct: 118 SKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVL-LKA-------TAGGGGRGIRI 169

Query: 66  SKGGVRVESSLKSVISDIREILGS 89
            +    +  + +    +  +  G 
Sbjct: 170 CRNEEELVKNYEQASREAEKAFGR 193


>gi|319787363|ref|YP_004146838.1| carbamoyl-phosphate synthase, large subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465875|gb|ADV27607.1| carbamoyl-phosphate synthase, large subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 1080

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  S   A      +  P  +         R          
Sbjct: 129 RELFRVAMQEIGLECPKAEVARSFEQAVEIQAKVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +     ++            G   S V+ V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREEFEEIVKR-----------GLELSPVHEVLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I  +     IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCS-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|319892195|ref|YP_004149070.1| Carbamoyl-phosphate synthase large chain [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161891|gb|ADV05434.1| Carbamoyl-phosphate synthase large chain [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464704|gb|ADX76857.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 1057

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LL K +VP  KG   +S   A    + +  P+ V  S +  G
Sbjct: 669 EFEA--LLNKIDVPQPKGKTATSAQEALDNARDIGYPVVVRPSYVLGG 714


>gi|322437007|ref|YP_004219219.1| phosphoribosylamine/glycine ligase [Acidobacterium sp. MP5ACTX9]
 gi|321164734|gb|ADW70439.1| phosphoribosylamine/glycine ligase [Acidobacterium sp. MP5ACTX9]
          Length = 429

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 24/124 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  ++++ +P A   V ++    E  +       G   VVK+   A G+          
Sbjct: 106 AKDFMQRWEIPTAAYAVCTTKEQVEQILAAEGSGFGASVVVKADGLAAGK---------- 155

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               GV +  S    +S   E+    L+       G R   V +E+        + ++  
Sbjct: 156 ----GVVMCDSHGEAVSAAAEMFSGGLL-------GERAESVVIEETLTGPEISFFAICD 204

Query: 125 DRTS 128
            R +
Sbjct: 205 GRKA 208


>gi|261415243|ref|YP_003248926.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261371699|gb|ACX74444.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302328156|gb|ADL27357.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 1072

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L RK      +P+ +  + +++  A + +K + G   +++     GGRG
Sbjct: 667 RDLFRKMMDQLGIPMPESGMATNIDEALACVKQIGGYPVMIRPSFVLGGRG 717



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  +   +  +  SV  AE  +  +  P+ V  +    G                
Sbjct: 132 KETMQKLGIDTPRSGICHSVEEAEKIVAEIGYPVVVRPAYTMGG---------------A 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +++ + +     L  ++ T Q            +E+      EL + ++ D  +
Sbjct: 177 GGGFCYNVEELRTICSNGLELSM-THQC----------LIEESILGWEELEVEVVRDSKN 225

Query: 129 GMVAF 133
            M+A 
Sbjct: 226 QMIAI 230


>gi|298490013|ref|YP_003720190.1| carbamoyl-phosphate synthase large subunit ['Nostoc azollae' 0708]
 gi|298231931|gb|ADI63067.1| carbamoyl-phosphate synthase, large subunit ['Nostoc azollae' 0708]
          Length = 1094

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 36/173 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +      VPV      SS+  ++     +     +++     GG G G       
Sbjct: 129 RKLFNEAMGKIGVPVCPSGTASSLEESKEIAHHIGTYPLIIRPAFTMGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +                 Q G   S V+ + ++      +E  L ++ 
Sbjct: 182 -------IAYNQEEFELMA-----------QVGIDASPVSQILIDQSLLGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           D  +  V  I S      IE            + + P   +T ++   L DM 
Sbjct: 224 D-LADNVVIICS------IENFDPMGIHTGDSITVAPAQTLTDKEYQRLRDMA 269


>gi|169629911|ref|YP_001703560.1| carbamoyl phosphate synthase large subunit [Mycobacterium abscessus
           ATCC 19977]
 gi|169241878|emb|CAM62906.1| Carbamoyl-phosphate synthase large chain (CarB) [Mycobacterium
           abscessus]
          Length = 1112

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  +    ++   A+     +  P+ V  S +  GGRG
Sbjct: 695 DLLVSAGLPAPRFGTATTFEQAKQIAADIGYPVLVRPSYVL-GGRG 739



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     AK  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVAKVGGESAKSRVCFTMEEVRETVADLGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +   V     E L ++               V +E+     +E  L L+ D   
Sbjct: 186 ---MAYTADDVERMAGEGLSASPSAN-----------VLIEESIYGWKEFELELMRDGRD 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE V          + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQKMRD 271


>gi|329765427|ref|ZP_08257006.1| carbamoyl-phosphate synthase, large subunit [Candidatus
           Nitrosoarchaeum limnia SFB1]
 gi|329138068|gb|EGG42325.1| carbamoyl-phosphate synthase, large subunit [Candidatus
           Nitrosoarchaeum limnia SFB1]
          Length = 993

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 68/223 (30%), Gaps = 31/223 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + + NVPV K   + +   A+   + L  P+ +  +    G               G
Sbjct: 47  KDSMNQCNVPVLKSRTVKNFSDAKEIAEELGYPVIIRVAYTLGG-------------KGG 93

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +   +   +   L ++L           V  V VE+     +++   ++ D   
Sbjct: 94  GV--AYNEIELHEIVERGLRASL-----------VGQVLVEEYIGHWKQIEYEVMQD-YG 139

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQARIDG 187
           G    + + +  + ++    D         ID          A      + + G+  I  
Sbjct: 140 GNNVIVCNMENVLSMKVHTGDNIVVAPSQTIDNHEYHMLRTAALRATKHVGIVGECNIQY 199

Query: 188 G-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
             D   + Y    + +  L   + L     G       +KI  
Sbjct: 200 ALDSVSDRY-VAIEINPRLSRSSALASKATGYPLAYMSAKIGL 241


>gi|317403475|gb|EFV83983.1| phosphoribosylamine-glycine ligase [Achromobacter xylosoxidans C54]
          Length = 435

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 22/110 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++N+P A+    +   AA + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMVRHNIPTARYETFTDPAAAHAYIDQEGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADI 114
            GV V ++L+   + +  +LG        G  G+RV    C+  E+ + I
Sbjct: 152 -GVVVAATLEEAHAAVDAMLG----DGSMGEAGARVVIEECLVGEEASFI 196


>gi|306825482|ref|ZP_07458822.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432420|gb|EFM35396.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|291556260|emb|CBL33377.1| carbamoyl-phosphate synthase large subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +P  KG  + +   A  A   L  P+ +  S +  G
Sbjct: 674 ELLEKCKIPRPKGHTVFTTEEALKAANELGYPVLLRPSYVLGG 716


>gi|269218088|ref|ZP_06161942.1| phosphoribosylamine--glycine ligase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269213023|gb|EEZ79363.1| phosphoribosylamine--glycine ligase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 468

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 27/106 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A+  + +S+   E+A+     P +VVK    A G+             
Sbjct: 104 AKEVMASAGVQTARSRLCTSLGEVEAALDAFGAP-HVVKDDGLAAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V     + ++  +  L          P G       +E+  D
Sbjct: 150 -GVVVTDDRDAALAHAQGCLAK--------PEG----KALIEEFLD 182


>gi|229844767|ref|ZP_04464906.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae 6P18H1]
 gi|229812481|gb|EEP48171.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae 6P18H1]
          Length = 429

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVAF 133
                
Sbjct: 206 VEPMV 210


>gi|167749373|ref|ZP_02421500.1| hypothetical protein EUBSIR_00325 [Eubacterium siraeum DSM 15702]
 gi|167657654|gb|EDS01784.1| hypothetical protein EUBSIR_00325 [Eubacterium siraeum DSM 15702]
          Length = 1068

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K  +P  KG  + +   A  A   L  P+ +  S +  G
Sbjct: 674 ELLEKCKIPRPKGHTVFTTEEALKAANELGYPVLLRPSYVLGG 716


>gi|227113629|ref|ZP_03827285.1| putative acyl-CoA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 803

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 75/219 (34%), Gaps = 20/219 (9%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +           + +  P+ +         + +    
Sbjct: 482 LDTHEVQ--PILQAYGLDTLPTWIAGDSAETVHIAEQIGYPVAI---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    + + V      IL     T        R+  + V+  A+    +EL
Sbjct: 531 PHKSEVQGVMLYLRTAREVQQAAEAILDRVKRTYPQA----RIYGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
            +++  D   G +  +   +GG++  E           + +   + + +     + +   
Sbjct: 587 RIAVEQDPVFGPLIMLG--EGGVEWREKQAAVALPPLNMTLARYLVLQAVKGGKIREYSA 644

Query: 179 LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           L+         L   +     D  ++S L+I+PL+   +
Sbjct: 645 LRPLDIPALSRLLVQVSNLILDCPEISRLDIHPLLASGD 683


>gi|225621306|ref|YP_002722564.1| carbamoyl phosphate synthase large subunit [Brachyspira
           hyodysenteriae WA1]
 gi|225216126|gb|ACN84860.1| carbamoyl phosphate synthase large subunit [Brachyspira
           hyodysenteriae WA1]
          Length = 1065

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++   +L+  N+P  KG    +V  A      +  P+ V  S +  GGR     + + 
Sbjct: 668 HEFE--EMLKTLNIPQPKGETAITVDEALVIANDIGYPVLVRPSYVL-GGRAM---EIVD 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            D+   V +E+++K V +    ++   +I K+ 
Sbjct: 722 NDASLKVYMETAVKEVSNKAPILIDRYVIGKEI 754



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L+   N PV + V++ SV  A      +   L V  +    G
Sbjct: 133 KKLMNDINEPVPESVIVHSVEEAIEFANKIGYHLVVRPAYTLGG 176


>gi|126567327|emb|CAL47312.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 11/90 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        D   
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDPKD 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKE 348
           +  ++ I G I     + K   GI+ A ++
Sbjct: 61  RNKIMIIGGAIANFTDVAKTFTGIIQAFEK 90


>gi|50310409|ref|XP_455224.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644360|emb|CAG97932.1| KLLA0F03190p [Kluyveromyces lactis]
          Length = 1117

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 66/221 (29%), Gaps = 44/221 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++P A+ +   +V AA  A   +  P+ V  +    G                G  
Sbjct: 158 LKEIDIPTAESIACETVDAALEAADIVGFPVIVRSAYALGGL---------------GSG 202

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + +     + L             S    + VE      +E+   ++ DR    +
Sbjct: 203 FANNAQEMKQLASQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDRVGNCI 249

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            ++  P   ++ E+          +   L + G+  
Sbjct: 250 TV-------CNMENFDPLGIHTGDSIVFAPSQTLSDEEFHMLRSAAIKIIRHLGVIGECN 302

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +       +L Y+   + +  L   + L     G      +
Sbjct: 303 VQYALSPDSLDYRV-IEVNARLSRSSALASKATGYPLAYTA 342


>gi|56419687|ref|YP_147005.1| carbamoyl phosphate synthase large subunit [Geobacillus
           kaustophilus HTA426]
 gi|56379529|dbj|BAD75437.1| carbamoyl-phosphate synthase(glutamine-hydrolyzing) large chain
           [Geobacillus kaustophilus HTA426]
          Length = 1065

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P   G    SV  A +  + +  P+ V  S +  G
Sbjct: 674 LSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  +I S+  A + ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIIHSLEEAYAFVEQIGYPVIV 168


>gi|86147979|ref|ZP_01066282.1| hypothetical protein MED222_06745 [Vibrio sp. MED222]
 gi|85834203|gb|EAQ52358.1| hypothetical protein MED222_06745 [Vibrio sp. MED222]
          Length = 893

 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q     + +N+ V    + S    A    +T+  P+ V         + +       +D
Sbjct: 496 HQNSQFFKHFNLDVLPTWIASDPSEAVHIAETIGYPVAV---------KLRSPDIAHKSD 546

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +    +   V +  + IL  + ++  T      ++ + ++  A +   +EL + + 
Sbjct: 547 VQGVMLNLRNSNEVANAAQAILDRSQLSFPTAH----IHGLLIQGMAKLAGGQELRVKVT 602

Query: 124 VDRTSGMVAFIASTQGGMDIEE 145
            D T G +  +   QGG + +E
Sbjct: 603 TDETFGPIILLG--QGGSEWDE 622


>gi|261419341|ref|YP_003253023.1| carbamoyl phosphate synthase large subunit [Geobacillus sp.
           Y412MC61]
 gi|319766157|ref|YP_004131658.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y412MC52]
 gi|261375798|gb|ACX78541.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y412MC61]
 gi|317111023|gb|ADU93515.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y412MC52]
          Length = 1065

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P   G    SV  A +  + +  P+ V  S +  G
Sbjct: 674 LSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  +I S+  A + ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIIHSLEEAYAFVEQIGYPVIV 168


>gi|209552354|ref|YP_002284269.1| urea carboxylase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539466|gb|ACI59398.1| urea carboxylase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 1179

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 85/224 (37%), Gaps = 37/224 (16%)

Query: 8   AKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L +   VP+  G  ++ SV  A SA +T+  P+ ++KS    GG G     +L A++
Sbjct: 119 ARQLAKASGVPLLPGTDLLQSVEEALSAAETVGYPV-MLKSTAGGGGIGM----QLCANA 173

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G   + +S +SV    R   G                 VY+E      R + + +  D 
Sbjct: 174 AG---LTASFESVQRTARASFGDA--------------RVYIERFVAQARHVEVQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  IA  +    ++   +   ++       P  G+++E  A L     +L      
Sbjct: 217 KGR---VIALGERDCSLQRRNQKVVEET------PAPGLSAETRARLHKAAVDLGSSVSY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +       +Y     ++   LE+N  + +++    V ++    D
Sbjct: 268 ESAGTVEFIYDP-QREEFYFLEVNTRLQVEHP---VTEAVFGID 307


>gi|157164628|ref|YP_001467556.1| carbamoyl phosphate synthase large subunit [Campylobacter concisus
           13826]
 gi|112801156|gb|EAT98500.1| carbamoyl-phosphate synthase, large subunit [Campylobacter concisus
           13826]
          Length = 1086

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA ++K  + + +     ++  A +A   +  PL +  S    G                
Sbjct: 131 KATMQKIGMDLPESRYAYNMDDALNAANEIGFPLIIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++                   TG   S ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVAYNMDEFKELA-----------NTGLDASPIHEILIEESLLGWKEYEMEVIRDRND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++  ++ D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQAMRDA 265


>gi|70726712|ref|YP_253626.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           haemolyticus JCSC1435]
 gi|82592665|sp|Q4L5Q5|CARB_STAHJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|68447436|dbj|BAE05020.1| carbamoyl-phosphate synthase large chain [Staphylococcus
           haemolyticus JCSC1435]
          Length = 1057

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LL   +VP  KG   +S   A    + +  P+ V  S +  G
Sbjct: 669 EFEA--LLHTIDVPQPKGKTATSPKEALENAREIGYPVVVRPSYVLGG 714


>gi|53713459|ref|YP_099451.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           YCH46]
 gi|81608482|sp|Q64UB2|PURT_BACFR RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|52216324|dbj|BAD48917.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides fragilis
           YCH46]
          Length = 388

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 33/165 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   + A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYYYAKSLEELKEAAEIIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+  + L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSAAELEHAWEY-----------GCNGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
                      G +   +   DY +      IDP     +ED+A 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPAHLKEAEDMAE 242


>gi|1168772|sp|P46537|CARB_BACCL RecName: Full=Carbamoyl-phosphate synthase pyrimidine-specific
           large chain; AltName: Full=Carbamoyl-phosphate
           synthetase ammonia chain
 gi|312443|emb|CAA51739.1| carbamoyl-phosphate synthase (glutamine-hydrolysing) [Bacillus
           caldolyticus]
          Length = 1065

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P   G    SV  A +  + +  P+ V  S +  G
Sbjct: 674 LSELGIPKPAGKTAVSVEEAVAIAEEIGYPVLVRPSYVLGG 714



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q +AL+ +   PV +  +I S+  A + ++ +  P+ V
Sbjct: 131 QFRALMNELGEPVPESAIIHSLEEAYAFVEQIGYPVIV 168


>gi|88808802|ref|ZP_01124312.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
           7805]
 gi|88787790|gb|EAR18947.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. WH
           7805]
          Length = 1107

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS+  A+    ++     +++     GG G G           
Sbjct: 133 KEAMERIGVKVCPSGIASSMDEAKDVGASIGTFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L ++            V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFDAICKSGLDAS-----------PVSQILIEKSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|114563099|ref|YP_750612.1| CoA-binding domain-containing protein [Shewanella frigidimarina
           NCIMB 400]
 gi|114334392|gb|ABI71774.1| CoA-binding domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 900

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA  +LR Y +   +   +  V  A +    +  P+  +K Q               +D
Sbjct: 498 HQAVDILRAYGLNTIETRFVKDVDEAVNVANQVGYPV-ALKVQ--------SPDLLYKSD 548

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G V   +S + V      I+     I       G  +  + +  G    +E+ +S++ 
Sbjct: 549 VHGVVLNLASDEDVSHAAHSIIDRVHQINPSAKIDGLIIQKMALTAG---AQEIRVSVIN 605

Query: 125 DRTSGMVAFIASTQGGMDI 143
           D   G    +   +GG + 
Sbjct: 606 DPVFGPAICLG--EGGSEW 622


>gi|331266652|ref|YP_004326282.1| carbamoyl-phosphate synthase, large subunit [Streptococcus oralis
           Uo5]
 gi|326683324|emb|CBZ00942.1| carbamoyl-phosphate synthase, large subunit [Streptococcus oralis
           Uo5]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714


>gi|323700156|ref|ZP_08112068.1| CoA-binding domain protein [Desulfovibrio sp. ND132]
 gi|323460088|gb|EGB15953.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132]
          Length = 702

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A  +   Y +PV +  ++ +   A  A K +  P+ +     H   RG+     L   +
Sbjct: 491 DAMDIAAAYELPVPETRLVRTSDQAVRAAKKMGYPVALKIESPHLTSRGEVDGVALDLHT 550

Query: 67  KGGVRVES 74
              VR   
Sbjct: 551 PREVRDAW 558


>gi|307706740|ref|ZP_07643545.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           SK321]
 gi|307617825|gb|EFN96987.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           SK321]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + N P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELNQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|307708818|ref|ZP_07645280.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           NCTC 12261]
 gi|307615184|gb|EFN94395.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           NCTC 12261]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|306829264|ref|ZP_07462454.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           ATCC 6249]
 gi|304428350|gb|EFM31440.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           ATCC 6249]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714


>gi|300786637|ref|YP_003766928.1| argininosuccinate lyase [Amycolatopsis mediterranei U32]
 gi|299796151|gb|ADJ46526.1| argininosuccinate lyase [Amycolatopsis mediterranei U32]
          Length = 423

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 31/98 (31%), Gaps = 23/98 (23%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR   VPV   V   +  AAE A   L GP+ V               K +      GVR
Sbjct: 131 LRAAGVPVPDFVACDTAAAAERAAHRLGGPVVV---------------KPVSGSGSAGVR 175

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
             ++  +       +L        T      V  V VE
Sbjct: 176 RCANPGAARWWADRLL--------TDGRRFPVARVLVE 205


>gi|238752804|ref|ZP_04614272.1| Phosphoribosylamine--glycine ligase [Yersinia rohdei ATCC 43380]
 gi|238709002|gb|EEQ01252.1| Phosphoribosylamine--glycine ligase [Yersinia rohdei ATCC 43380]
          Length = 428

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEIEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|224543603|ref|ZP_03684142.1| hypothetical protein CATMIT_02812 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523475|gb|EEF92580.1| hypothetical protein CATMIT_02812 [Catenibacterium mitsuokai DSM
           15897]
          Length = 416

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++K+N+P AK   ++   +A  A+     P+ VVK+   A G+             
Sbjct: 104 SKDFMKKHNIPTAKYEEVTDYESAVKALDAFDLPV-VVKADGLAAGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV +  + +    +++ +L         G  G +V
Sbjct: 150 -GVVICETKEQAKEELKVMLD----GSAFGEAGKKV 180


>gi|159794834|pdb|2IP4|A Chain A, Crystal Structure Of Glycinamide Ribonucleotide Synthetase
           From Thermus Thermophilus Hb8
 gi|159794835|pdb|2IP4|B Chain B, Crystal Structure Of Glycinamide Ribonucleotide Synthetase
           From Thermus Thermophilus Hb8
          Length = 417

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 15/82 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L  +Y +P A+  V      A + ++ +  P+ V               K+    + 
Sbjct: 105 AKGLXERYGIPTARYRVFREPLEALAYLEEVGVPVVV---------------KDSGLAAG 149

Query: 68  GGVRVESSLKSVISDIREILGS 89
            GV V   L      +  IL  
Sbjct: 150 KGVTVAFDLHQAKQAVANILNR 171


>gi|94966767|ref|NP_001035563.1| trifunctional purine biosynthetic protein adenosine-3 [Bos taurus]
 gi|75040086|sp|Q59A32|PUR2_BOVIN RecName: Full=Trifunctional purine biosynthetic protein
           adenosine-3; Includes: RecName:
           Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=Glycinamide ribonucleotide synthetase; Short=GARS;
           AltName: Full=Phosphoribosylglycinamide synthetase;
           Includes: RecName:
           Full=Phosphoribosylformylglycinamidine cyclo-ligase;
           AltName: Full=AIR synthase; Short=AIRS; AltName:
           Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
           RecName: Full=Phosphoribosylglycinamide
           formyltransferase; AltName:
           Full=5'-phosphoribosylglycinamide transformylase;
           AltName: Full=GAR transformylase; Short=GART
 gi|61966460|emb|CAG47113.1| glycinamide ribonucleotide formyltransferase, isoform 1 [Bos
           taurus]
 gi|113912153|gb|AAI22574.1| Phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase [Bos taurus]
 gi|296491672|gb|DAA33705.1| trifunctional purine biosynthetic protein adenosine-3 [Bos taurus]
          Length = 1010

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +  A+    +    A   I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGISTARWRAFTKPKEACDFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     +REI    +  K  G  G     V +E+  +      L     R
Sbjct: 157 -GVIVAKSKEEACEAVREI----MQGKAFGEAG---ETVVIEELLEGEEVSCLCFTDGR 207


>gi|16077721|ref|NP_388535.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221308490|ref|ZP_03590337.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312812|ref|ZP_03594617.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317736|ref|ZP_03599030.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322014|ref|ZP_03603308.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|131611|sp|P12039|PUR2_BACSU RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|326634053|pdb|2XD4|A Chain A, Nucleotide-Bound Structures Of Bacillus Subtilis
           Glycinamide Ribonucleotide Synthetase
 gi|143374|gb|AAA22684.1| phosphoribosyl glycinamide synthetase (PUR-D; gtg start codon)
           [Bacillus subtilis]
 gi|2465561|gb|AAB72186.1| phosphoribosylglycinamide synthetase [Bacillus subtilis]
 gi|2632967|emb|CAB12473.1| phosphoribosylglycinamide synthetase [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 422

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 15/119 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A+    +S   A++ ++    P+ V+K+   A G+G      +    +
Sbjct: 106 AKDLMKKYDIPTAEYETFTSFDEAKAYVQEKGAPI-VIKADGLAAGKG----VTVAMTEE 160

Query: 68  GGVRVESSLKS--------VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             +                    I E L     +      G +V  + +    D  R  
Sbjct: 161 EAIACLHDFLEDEKFGDASASVVIEEYLSGEEFSLMAFVKGEKVYPMVIAQ--DHKRAF 217


>gi|322374548|ref|ZP_08049062.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           C300]
 gi|321280048|gb|EFX57087.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           C300]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|293365151|ref|ZP_06611868.1| carbamoyl-phosphate synthase, large subunit [Streptococcus oralis
           ATCC 35037]
 gi|307703689|ref|ZP_07640630.1| carbamoyl-phosphate synthase, large subunit [Streptococcus oralis
           ATCC 35037]
 gi|291316601|gb|EFE57037.1| carbamoyl-phosphate synthase, large subunit [Streptococcus oralis
           ATCC 35037]
 gi|307622524|gb|EFO01520.1| carbamoyl-phosphate synthase, large subunit [Streptococcus oralis
           ATCC 35037]
          Length = 1058

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714


>gi|283786199|ref|YP_003366064.1| acyl-CoA synthetase [Citrobacter rodentium ICC168]
 gi|282949653|emb|CBG89272.1| putative acyl-CoA synthetase [Citrobacter rodentium ICC168]
          Length = 886

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 75/237 (31%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + ++          +   +GG++       +P++   + + PL       + +       
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------HPEEQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+++PL+    G    LD  +  
Sbjct: 639 IRGRSALRPLDIAGLSQLLVQVSNLIVDCPEIQRLDMHPLLASA-GEFTALDVTLEI 694


>gi|237714624|ref|ZP_04545105.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D1]
 gi|229445393|gb|EEO51184.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D1]
          Length = 388

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 47/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     ++   + A   +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYFYAKTLDELKEAAAKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                  +G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|254391346|ref|ZP_05006550.1| carbamoyl-phosphate synthase large chain [Streptomyces clavuligerus
           ATCC 27064]
 gi|294811546|ref|ZP_06770189.1| Carbamoyl-phosphate synthase large chain [Streptomyces clavuligerus
           ATCC 27064]
 gi|326440068|ref|ZP_08214802.1| carbamoyl phosphate synthase large subunit [Streptomyces
           clavuligerus ATCC 27064]
 gi|197705037|gb|EDY50849.1| carbamoyl-phosphate synthase large chain [Streptomyces clavuligerus
           ATCC 27064]
 gi|294324145|gb|EFG05788.1| Carbamoyl-phosphate synthase large chain [Streptomyces clavuligerus
           ATCC 27064]
          Length = 1105

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L++  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 686 RVLQEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVL-GGRG 730


>gi|126567331|emb|CAL47314.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 94

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDAQG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVK 347
           +G ++ I G I     + K   GI+ A +
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFE 89


>gi|4741183|emb|CAA52778.2| glycinamide ribonucleotide synthetase [Arabidopsis thaliana]
          Length = 311

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P AK    S   AA+  I+    P+ V+K+   A G+              
Sbjct: 2   KNLCHKYNIPTAKYKTFSDASAAKEYIQEQGAPI-VIKADGLAAGK-------------- 46

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV V   L+     +  +L    +    G  G     V VE+  +     + +L+
Sbjct: 47  GVTVAMELEEAFEAVDSML----VKGVFGSAGC---QVVVEEFLEGEEASFFALV 94


>gi|262406489|ref|ZP_06083038.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           2_1_22]
 gi|294646119|ref|ZP_06723782.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides ovatus
           SD CC 2a]
 gi|294808286|ref|ZP_06767044.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           xylanisolvens SD CC 1b]
 gi|262355192|gb|EEZ04283.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           2_1_22]
 gi|292638563|gb|EFF56918.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides ovatus
           SD CC 2a]
 gi|294444505|gb|EFG13214.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295084020|emb|CBK65543.1| formate-dependent phosphoribosylglycinamide formyltransferase
           [Bacteroides xylanisolvens XB1A]
          Length = 389

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 47/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     ++   + A   +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKTLDELKEAAAKIGFPC-VVKPLMSSSGKGQSL--------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                  +G  G  +  + +E+      E  ++LL    
Sbjct: 158 --VKSADELEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 202 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 233


>gi|288930717|ref|YP_003434777.1| acetyl-CoA carboxylase, biotin carboxylase [Ferroglobus placidus
           DSM 10642]
 gi|288892965|gb|ADC64502.1| acetyl-CoA carboxylase, biotin carboxylase [Ferroglobus placidus
           DSM 10642]
          Length = 514

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 23/119 (19%)

Query: 8   AKALLRKYNVPV-AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+R+  VPV      I S   A+   + +  P+ V               K      
Sbjct: 119 ARKLMREAGVPVIPGSDEIESAEEAKEFAEKVGYPVAV---------------KASGGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G+ +  + + ++            +K+ G    +   VYVE      R +   +L D
Sbjct: 164 GIGISIAHNEEELVKAFER-------SKKLGEKYFKDPTVYVEKYLPKPRHIEFQILAD 215


>gi|254454230|ref|ZP_05067667.1| cyanophycin synthetase [Octadecabacter antarcticus 238]
 gi|198268636|gb|EDY92906.1| cyanophycin synthetase [Octadecabacter antarcticus 238]
          Length = 957

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 6/115 (5%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQ-IHAGGRGKGRFKELPADSKG 68
            +L    +PV + + ++S   A  A   +  P+ V      H  G      ++       
Sbjct: 232 RILGDLGLPVPRQIAVTSPEDAIRAANRIGYPVVVKPLDGNHGNGISINLKEDHAVSEAF 291

Query: 69  GVRVESSLKSVISDIREIL-----GSTLITKQTGPTGSRVNCVYVEDGADILREL 118
           G  +E + +     +   +        +I  +      RV    V +G +   EL
Sbjct: 292 GFALEYNKRGATVIVETFIQGLDHRMLVINGKLEAVSKRVPGHIVGNGKNTAAEL 346


>gi|254361765|ref|ZP_04977900.1| phosphoribosylamine--glycine ligase [Mannheimia haemolytica PHL213]
 gi|153093300|gb|EDN74296.1| phosphoribosylamine--glycine ligase [Mannheimia haemolytica PHL213]
          Length = 428

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|311112174|ref|YP_003983396.1| phosphoribosylamine-glycine ligase [Rothia dentocariosa ATCC 17931]
 gi|310943668|gb|ADP39962.1| phosphoribosylamine-glycine ligase [Rothia dentocariosa ATCC 17931]
          Length = 429

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 16/108 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ + NVP A+  V ++   A  A+     P YVVK    A G+             
Sbjct: 108 AKQVMEEANVPTARAFVATTDAEAAQALDEFGAP-YVVKDDGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADI 114
            GV V  +  + +        +   +  +    G  V+   + DG ++
Sbjct: 154 -GVVVTENRDAALEHANACFAAGGSVVIEEFLDGPEVSLFVISDGKNV 200


>gi|221633169|ref|YP_002522394.1| phosphoribosylamine--glycine ligase [Thermomicrobium roseum DSM
           5159]
 gi|221155703|gb|ACM04830.1| phosphoribosylamine--glycine ligase [Thermomicrobium roseum DSM
           5159]
          Length = 437

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R   VP A+  V++   AA++A++ L  P  V+K+   A G+             
Sbjct: 110 AKDVMRAAGVPTAEAQVVTDFAAAQAALERLDFP-LVIKASGLAAGK------------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G  V SS +     +  ++            GS  + V +E+  +  REL   ++ D T
Sbjct: 156 -GAIVVSSRREAEEVLHWMMVQR-------ALGSAADEVLLEEYLE-GRELSFLVVTDGT 206

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 207 TVLPLLPA 214


>gi|218676512|ref|YP_002395331.1| Acyl-CoA synthetase [Vibrio splendidus LGP32]
 gi|218324780|emb|CAV26462.1| Acyl-CoA synthetase [Vibrio splendidus LGP32]
          Length = 893

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q     + +N+ V    + S    A    +T+  P+ V         + +       +D
Sbjct: 496 HQNSQFFKHFNLDVLPTWIASDPSEAVHIAETIGYPVAV---------KLRSPDIAHKSD 546

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +    +   V +  + IL  + ++  T      ++ + ++  A +   +EL + + 
Sbjct: 547 VQGVMLNLRNSNEVANAAQAILDRSQLSFPTAH----IHGLLIQGMAKLAGGQELRVKVT 602

Query: 124 VDRTSGMVAFIASTQGGMDIEE 145
            D T G +  +   QGG + +E
Sbjct: 603 TDETFGPIILLG--QGGSEWDE 622


>gi|149742151|ref|XP_001497971.1| PREDICTED: similar to Trifunctional purine biosynthetic protein
           adenosine-3 [Equus caballus]
          Length = 1010

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 18/96 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTAQWRAFTKPEEACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  S +     ++EI    +  K  G  G  +
Sbjct: 157 -GVIVAESKEEACRAVQEI----MQDKAFGAAGETI 187


>gi|149410706|ref|XP_001508054.1| PREDICTED: similar to Propionyl-Coenzyme A carboxylase, alpha
           polypeptide [Ornithorhynchus anatinus]
          Length = 327

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 71/239 (29%), Gaps = 40/239 (16%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 123 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 167

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G    +++   +    + + +E   D  R + + +L 
Sbjct: 168 GGGKGMRIAWDDEETRD------GFRFSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 220

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   ++     
Sbjct: 221 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPKTRKAMGEQAVALAKAVKYSSAG 277

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            ++              K+   LE+N     +     V  + +  D  AL  H +   L
Sbjct: 278 TVEFL--------VDSKKNFYFLEMN----TRLQVTFVDHNNVGRDYRALVGHPEDPNL 324


>gi|148978387|ref|ZP_01814881.1| hypothetical protein VSWAT3_02471 [Vibrionales bacterium SWAT-3]
 gi|145962413|gb|EDK27692.1| hypothetical protein VSWAT3_02471 [Vibrionales bacterium SWAT-3]
          Length = 894

 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q     + +N+ V    + S    A    +T+  P+ V         + +       +D
Sbjct: 496 HQNSQFFKHFNLDVLPTWIASDPSEAVHIAETIGYPVAV---------KLRSPDIAHKSD 546

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +    +   V +  + IL  + ++  T      ++ + V+  A +   +EL + + 
Sbjct: 547 VQGVMLNLRNSSEVANAAQAILDRSQLSFPTAH----IHGLLVQGMAKLAGGQELRVKVT 602

Query: 124 VDRTSGMVAFIASTQGGMDIEE 145
            D T G +  +   QGG + +E
Sbjct: 603 TDETFGPIILLG--QGGSEWDE 622


>gi|322387503|ref|ZP_08061113.1| carbamoyl-phosphate synthase, large subunit [Streptococcus infantis
           ATCC 700779]
 gi|321142032|gb|EFX37527.1| carbamoyl-phosphate synthase, large subunit [Streptococcus infantis
           ATCC 700779]
          Length = 1058

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|315084350|gb|EFT56326.1| carbamoyl-phosphate synthetase large chain, oligomerisation domain
           protein [Propionibacterium acnes HL027PA2]
          Length = 590

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|296100633|ref|YP_003610779.1| phosphoribosylglycineamide synthetase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055092|gb|ADF59830.1| phosphoribosylglycineamide synthetase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 430

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|218131189|ref|ZP_03459993.1| hypothetical protein BACEGG_02795 [Bacteroides eggerthii DSM 20697]
 gi|317477294|ref|ZP_07936530.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           eggerthii 1_2_48FAA]
 gi|217986581|gb|EEC52916.1| hypothetical protein BACEGG_02795 [Bacteroides eggerthii DSM 20697]
 gi|316906543|gb|EFV28261.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           eggerthii 1_2_48FAA]
          Length = 388

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+   ++A + +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTAKYFYAKSLDELKTAAEKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|315230937|ref|YP_004071373.1| acetyl-CoA synthetase subunit alpha [Thermococcus barophilus MP]
 gi|315183965|gb|ADT84150.1| acetyl-CoA synthetase (ADP-forming), alpha chain [Thermococcus
           barophilus MP]
          Length = 473

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 35/199 (17%)

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +      +A+++   I    D    +     AK      +     IG + +G G  +   
Sbjct: 273 AGADVIYDAVFKQTGIIRAEDF---EHMFDVAKAFAKCRLPKGDRIGIITDGGGAGVMAS 329

Query: 284 DIIKLYGGA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVK 322
           D +  +G                         N  DV G  D  +   A +   +D +V 
Sbjct: 330 DAVAKFGLKMAQLSEETLKFLKENFPPHAVAGNPTDVVGDTDAQRYKIAIEGFVNDPNVD 389

Query: 323 GILINIFGGIMRCDVLVKGILSAVKEVKIN--IPLV-MRLEGANVDIGNRLIAESGLNVI 379
            IL+ +   +   + +   I+  + E   N   P+V + + G   +   +L+ E G+ V 
Sbjct: 390 AILVIVLFQVPLLNEM--EIIEILSEYAKNSEKPIVAVAMGGKKTEYYAKLLEEKGVPVY 447

Query: 380 TAIDLDDAAQKIVHAVKGV 398
                    ++ V A+ G+
Sbjct: 448 PTP------ERGVRALAGL 460


>gi|94309787|ref|YP_582997.1| CoA-binding [Cupriavidus metallidurans CH34]
 gi|93353639|gb|ABF07728.1| Putative acetyl-CoA synthetase (CoA-binding domain) [Cupriavidus
           metallidurans CH34]
          Length = 700

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 22/223 (9%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           EY A+A    + VP     + +S   A +A   L  P+   V+ + +    + +    +L
Sbjct: 485 EYDARAWFASHGVPTIDERIATSADDAAAAGAELGFPVALKVLSADVP--HKTEAGGVQL 542

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              + G VR    +              +   Q     +R++ V V+  A    EL +  
Sbjct: 543 RLTNAGAVREAFHV-------------VMDNVQRHVPTARIDGVIVQRMAAQGVELIVGA 589

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
           + D   G    +    GG   E       + +          +       L D       
Sbjct: 590 VRDPVFGPALTVG--LGGTLTELYRDVTHRLLPVDATGAREMLQELKAFPLLDGYRNAPL 647

Query: 182 QARIDGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNGRLRVL 222
           +      +      +AF          EINPL + + G+   +
Sbjct: 648 RDIDGACEAIAAFGRAFVALGETAGEAEINPLTVRERGQGVAM 690


>gi|320532945|ref|ZP_08033705.1| phosphoribosylamine--glycine ligase [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320134839|gb|EFW27027.1| phosphoribosylamine--glycine ligase [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 438

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++     +A+     P YVVK    A G+G     ELP    
Sbjct: 106 AKEIMTAAGVPTAEAAVCTTEAELAAALDRFGAP-YVVKEDGLAAGKGVVVTDELPVALA 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            G R   +  S    + + L     +      G+ V  +      D  R
Sbjct: 165 HG-RACLTRGSGRVVVEDYLDGPEASVFCVCDGATVRPL--APAQDFKR 210


>gi|319745061|gb|EFV97388.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae ATCC 13813]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 62/201 (30%), Gaps = 41/201 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+  N+P   G   ++   A +A + +  P+ V  S +  G                 ++
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGG---------------RAMK 718

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS-GM 130
           +  + +         L   + T         V    + D   I +E  +  + D  +  +
Sbjct: 719 IVENEED--------LRHYMTTAVKASPDHPV---LI-DAYLIGKECEVDAISDGQNILI 766

Query: 131 VAFIASTQ-GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            A +   +  G+   +    YP +     I  +  +       L   L   G   I    
Sbjct: 767 PAIMEHIERAGVHSGDSMAVYPPQTLSETI--IETIVDY-TKRLAIGLNCIGMMNIQFVI 823

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
               +Y         ++E+NP
Sbjct: 824 KDQKVY---------VIEVNP 835



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|289168074|ref|YP_003446343.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           B6]
 gi|288907641|emb|CBJ22478.1| carbamoyl-phosphate synthase, large subunit [Streptococcus mitis
           B6]
          Length = 1058

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|228470503|ref|ZP_04055370.1| phosphoribosylamine--glycine ligase [Porphyromonas uenonis 60-3]
 gi|228307799|gb|EEK16755.1| phosphoribosylamine--glycine ligase [Porphyromonas uenonis 60-3]
          Length = 457

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 26/111 (23%)

Query: 5   EYQAKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           EY +K  +R++ +P A         +  AE  +  L  P +V+K+   A G+        
Sbjct: 141 EY-SKEFMRRHGIPTASYETFGPQDMEEAEEFLDQLSAP-FVLKADGLAAGK-------- 190

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                 GV +    +     + +     L +   G  G     + +E+  +
Sbjct: 191 ------GVLICQDREEAEQGLGQ-----LFSGMFGSRGQ---RIVIEEFLE 227


>gi|156836922|ref|XP_001642500.1| hypothetical protein Kpol_299p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113037|gb|EDO14642.1| hypothetical protein Kpol_299p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1832

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ L +  NVP V    +IS+V   +   + L  P+ +               K    
Sbjct: 745 HSARELAKNANVPLVPGSSLISNVQEVKEVAQALGYPVMI---------------KSTAG 789

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G++   + + + S    +    L     G +G     V++E   +  R + + +L 
Sbjct: 790 GGGIGLQKVENEEQIESMFATV--KHLGETYFGNSG-----VFLEKFIENARHVEVQILG 842

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   + +  + L      +
Sbjct: 843 DGKGKAIAI------GERDCSLQRRNQKIIEETPPPNLPESTLIKMRNAAESLG--ALTK 894

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
             G      +Y    D +   LE+N
Sbjct: 895 YLGAGTVEYIYDQDRD-EFYFLEVN 918


>gi|116072928|ref|ZP_01470190.1| carbamoyl phosphate synthetase, large subunit [Synechococcus sp.
           RS9916]
 gi|116068233|gb|EAU73985.1| carbamoyl phosphate synthetase, large subunit [Synechococcus sp.
           RS9916]
          Length = 1107

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS+  AE+    +     +++     GG G G           
Sbjct: 133 KQAMERIGVKVCPSGIASSMEEAEAVGAAIGTFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           +G   S V+ + +E      +E  L ++ D+  
Sbjct: 182 ---IAYNPEEYAAICK-----------SGLEASPVSQILIEQSLLGWKEFELEVMRDQV- 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           A+LR+  +   +  +  S   A S  + +  P+ V  S +  G   +  F E
Sbjct: 704 AILRELEIRQPRNGLARSEEEARSVAERVGYPVVVRPSYVLGGRAMEVVFDE 755


>gi|307709226|ref|ZP_07645685.1| carbamoyl-phosphate synthase large chain [Streptococcus mitis
           SK564]
 gi|307620172|gb|EFN99289.1| carbamoyl-phosphate synthase large chain [Streptococcus mitis
           SK564]
          Length = 1058

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|260549425|ref|ZP_05823644.1| phosphoribosylamine-glycine ligase [Acinetobacter sp. RUH2624]
 gi|260407534|gb|EEX01008.1| phosphoribosylamine-glycine ligase [Acinetobacter sp. RUH2624]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYEVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|242056053|ref|XP_002457172.1| hypothetical protein SORBIDRAFT_03g002690 [Sorghum bicolor]
 gi|241929147|gb|EES02292.1| hypothetical protein SORBIDRAFT_03g002690 [Sorghum bicolor]
          Length = 637

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 31/157 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+ K    K  +P+   + + ++H+ E A +    PL V   ++   GRG          
Sbjct: 183 YRQKRHFSKCGIPLPDFMEVDTLHSIEEAGEKFGYPLMVKSKRLAYDGRGNA-------- 234

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 V  + + + S +  + G               + +YVE     ++EL + +   
Sbjct: 235 ------VAKTKEELSSVVASLGGFE-------------HGLYVERWTPFVKELSVIVARS 275

Query: 126 RTSGMVAF----IASTQGGMDIEEVAKDYPQKIFKLL 158
           R S  V +        +    + E   +   KI KL 
Sbjct: 276 RDSSTVCYPVVETIHKENICHVVEAPAEVSDKIKKLA 312


>gi|212694840|ref|ZP_03302968.1| hypothetical protein BACDOR_04374 [Bacteroides dorei DSM 17855]
 gi|319643489|ref|ZP_07998112.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_1_40A]
 gi|212662593|gb|EEB23167.1| hypothetical protein BACDOR_04374 [Bacteroides dorei DSM 17855]
 gi|317384894|gb|EFV65850.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_1_40A]
          Length = 389

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 33/154 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     S+     A + +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKSLEELREAAREIGFPC-VVKPLMSSSGKGQSL--------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                   G  G  +  + +E+      E  ++LL    
Sbjct: 158 --VKSADELEQAWHY-----------GCEGSRGD-IKELIIEEFIQFDSE--ITLLTVTQ 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161
                      G +   +   DY +      IDP
Sbjct: 202 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDP 232


>gi|86748986|ref|YP_485482.1| phosphoribosylamine--glycine ligase [Rhodopseudomonas palustris
           HaA2]
 gi|86572014|gb|ABD06571.1| phosphoribosylamine--glycine ligase [Rhodopseudomonas palustris
           HaA2]
          Length = 442

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 57/170 (33%), Gaps = 36/170 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L + +++P A     S    A++ I+    P+ VVK+   A G+              
Sbjct: 122 KDLCKAHDIPTAAYERFSDPADAKAYIRVQGAPI-VVKADGLAAGK-------------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +  + G  L     G  G  V    VED   I  E    +L D   
Sbjct: 167 GVVVAMTLAEAEDAVDMMFGGAL-----GDAGIEV---VVEDFM-IGEEASFFVLCDGEH 217

Query: 129 GMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLIDPLIGVT 166
            +    A               GGM     A      I K  ++ +IG T
Sbjct: 218 ALPLATAQDHKRAFDGDKGPNTGGMGAYSPAPVMTDAICKQAMERIIGPT 267


>gi|226942840|ref|YP_002797913.1| phosphoribosylamine--glycine ligase [Azotobacter vinelandii DJ]
 gi|226717767|gb|ACO76938.1| Phosphoribosylglycinamide synthetase [Azotobacter vinelandii DJ]
          Length = 426

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A     + V  A + ++    P+ VVK+   A G+              
Sbjct: 108 KDFLARHDIPTAAYRNFTEVEPALAYLRERGAPI-VVKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V ++L+   + +R++L         G  G+RV    +E+  D   E    ++VD  +
Sbjct: 153 GVIVATTLEEAEAAVRDML----SGNAFGDAGARV---VIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|270292993|ref|ZP_06199204.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           M143]
 gi|270278972|gb|EFA24818.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           M143]
          Length = 1058

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   ++  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAASIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|206580118|ref|YP_002241054.1| phosphoribosylamine--glycine ligase [Klebsiella pneumoniae 342]
 gi|288937699|ref|YP_003441758.1| phosphoribosylamine/glycine ligase [Klebsiella variicola At-22]
 gi|290513207|ref|ZP_06552568.1| phosphoribosylamine-glycine ligase [Klebsiella sp. 1_1_55]
 gi|206569176|gb|ACI10952.1| phosphoribosylamine--glycine ligase [Klebsiella pneumoniae 342]
 gi|288892408|gb|ADC60726.1| phosphoribosylamine/glycine ligase [Klebsiella variicola At-22]
 gi|289774304|gb|EFD82311.1| phosphoribosylamine-glycine ligase [Klebsiella sp. 1_1_55]
          Length = 431

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVKDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|307704966|ref|ZP_07641854.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Streptococcus mitis SK597]
 gi|307621476|gb|EFO00525.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Streptococcus mitis SK597]
          Length = 1058

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAARKIGFPVLVRPSYVLGG 714



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +   T+  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVAFAATIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|269103655|ref|ZP_06156352.1| phosphoribosylamine--glycine ligase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163553|gb|EEZ42049.1| phosphoribosylamine--glycine ligase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTAQYQNFTEIEPALAYLRQQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G RV    +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLQEAEDAVRDMLA----GNAFGEAGHRV---VIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|154508781|ref|ZP_02044423.1| hypothetical protein ACTODO_01290 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798415|gb|EDN80835.1| hypothetical protein ACTODO_01290 [Actinomyces odontolyticus ATCC
           17982]
          Length = 1099

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 56/168 (33%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ +    VA+  +  ++    +A   L  PL V         R       L +    
Sbjct: 133 KEIVERSGAEVARSFIAHTMEECHAAAAELGYPLVV---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 + + +     + L +++ T+           V +E+     +E  L L+ D+  
Sbjct: 181 ---FAYTPEDLERIAGQGLAASITTE-----------VLLEESILGWKEYELELMRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +V           IE V          + + P + +T  ++  L D+
Sbjct: 227 NVVVV-------CSIENVDPVGVHTGDSITVAPALTLTDREMQRLRDI 267


>gi|126642234|ref|YP_001085218.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii ATCC
           17978]
 gi|169633199|ref|YP_001706935.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii SDF]
 gi|169795489|ref|YP_001713282.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii AYE]
 gi|184158710|ref|YP_001847049.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii ACICU]
 gi|213158572|ref|YP_002319870.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           AB0057]
 gi|215482974|ref|YP_002325179.1| Phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           AB307-0294]
 gi|239501421|ref|ZP_04660731.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii AB900]
 gi|260554550|ref|ZP_05826771.1| phosphoribosylamine-glycine ligase [Acinetobacter baumannii ATCC
           19606]
 gi|301346703|ref|ZP_07227444.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii AB056]
 gi|301512525|ref|ZP_07237762.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii AB058]
 gi|301595182|ref|ZP_07240190.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii AB059]
 gi|332855192|ref|ZP_08435743.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           6013150]
 gi|332866923|ref|ZP_08437264.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           6013113]
 gi|332873703|ref|ZP_08441646.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           6014059]
 gi|126388118|gb|ABO12616.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii ATCC
           17978]
 gi|169148416|emb|CAM86281.1| phosphoribosylamine--glycine ligase (GARS) (Glycinamide
           ribonucleotide synthetase) (Phosphoribosylglycinamide
           synthetase) [Acinetobacter baumannii AYE]
 gi|169151991|emb|CAP00855.1| phosphoribosylamine--glycine ligase (GARS) (Glycinamide
           ribonucleotide synthetase) (Phosphoribosylglycinamide
           synthetase) [Acinetobacter baumannii]
 gi|183210304|gb|ACC57702.1| Phosphoribosylamine-glycine ligase [Acinetobacter baumannii ACICU]
 gi|213057732|gb|ACJ42634.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           AB0057]
 gi|213985891|gb|ACJ56190.1| Phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           AB307-0294]
 gi|260411092|gb|EEX04389.1| phosphoribosylamine-glycine ligase [Acinetobacter baumannii ATCC
           19606]
 gi|322507479|gb|ADX02933.1| purD [Acinetobacter baumannii 1656-2]
 gi|323518624|gb|ADX93005.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727569|gb|EGJ58991.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           6013150]
 gi|332734346|gb|EGJ65472.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           6013113]
 gi|332738091|gb|EGJ68975.1| phosphoribosylamine--glycine ligase [Acinetobacter baumannii
           6014059]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYEVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|239826269|ref|YP_002948893.1| carbamoyl phosphate synthase large subunit [Geobacillus sp. WCH70]
 gi|239806562|gb|ACS23627.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp. WCH70]
          Length = 1040

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 49/217 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +I+SV  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMYELGEPVPESEIITSVDEAVAFAEKIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  I  + + L  + IT+             VE      +E+   ++ D T+
Sbjct: 180 GI--AETMEQFIDLVEKGLAESPITQC-----------LVERSVAGYKEIEYEVMRDHTN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRSSAIKIISALGIIG 279

Query: 182 QARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I    D F   Y         L+E+NP +   + 
Sbjct: 280 GCNIQFALDPFSKRY--------YLIEVNPRVSRSSA 308


>gi|125623834|ref|YP_001032317.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124492642|emb|CAL97591.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070602|gb|ADJ60002.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 413

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 27/119 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A      S+  A S +K    P+ V+K+   A G+             
Sbjct: 107 AKSIMKKYGVPTADYATFDSLEPALSHLKQHGVPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   + S  + + +I         +G  G  V    +E+  D       S +   
Sbjct: 153 -GVTVAFDIASAQAALADIF--------SGSQGKVV----IEEFLDGEEFSLFSFVHQG 198


>gi|332881492|ref|ZP_08449141.1| phosphoribosylamine--glycine ligase [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332680490|gb|EGJ53438.1| phosphoribosylamine--glycine ligase [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 422

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++ +P A     +  ++      ++TL  P YV+K+     G+           
Sbjct: 110 AKAFMQRHGIPTAAYRTFTGETLEEGLKFLETLKAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    +++E+LG    T          + V +E+      E  + +L D
Sbjct: 158 ---GVLILPTLEEARKELKEMLGGMFGTAS--------SSVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVA 132
             +  + 
Sbjct: 206 GRNYKIL 212


>gi|330997171|ref|ZP_08321024.1| phosphoribosylamine--glycine ligase [Paraprevotella xylaniphila YIT
           11841]
 gi|329570966|gb|EGG52673.1| phosphoribosylamine--glycine ligase [Paraprevotella xylaniphila YIT
           11841]
          Length = 422

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++ +P A     +  ++      ++TL  P YV+K+     G+           
Sbjct: 110 AKAFMQRHGIPTAAYRTFTGETLEEGLKFLETLKAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    +++E+LG    T          + V +E+      E  + +L D
Sbjct: 158 ---GVLILPTLEEARKELKEMLGGMFGTAS--------SSVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVA 132
             +  + 
Sbjct: 206 GRNYKIL 212


>gi|302341612|ref|YP_003806141.1| phosphoribosylamine/glycine ligase [Desulfarculus baarsii DSM 2075]
 gi|301638225|gb|ADK83547.1| phosphoribosylamine/glycine ligase [Desulfarculus baarsii DSM 2075]
          Length = 589

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  +      A+   + L GP+ VVK+   A G+             
Sbjct: 106 AKEVMEAAGVPTAQCRIFDDAAQAKDHCRNLGGPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +    ++    I+       +    G     V +E+  +       S LV   
Sbjct: 152 -GVIMCRTAGEAMAACERIM-------EERAFGQAGERVVIEEWLEGEE---ASFLVFTD 200

Query: 128 SGMVAFIASTQG 139
              +A + S+Q 
Sbjct: 201 GQAIAAMPSSQD 212


>gi|325959948|ref|YP_004291414.1| carbamoyl-phosphate synthase, large subunit [Methanobacterium sp.
           AL-21]
 gi|325331380|gb|ADZ10442.1| carbamoyl-phosphate synthase, large subunit [Methanobacterium sp.
           AL-21]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 96/316 (30%), Gaps = 45/316 (14%)

Query: 9   KALLRKYNV----PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  K+ +    P+     ++++  A  A+  +  P+ V  +    G            
Sbjct: 127 RELFGKFMLELNEPIPHCRAVTTLDEAIDAVTEIGYPVIVRPAFTLGG------------ 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    + K ++      L  +            +N V +++     +E    ++ 
Sbjct: 175 -TGGGV--AHNQKELVDIATRGLDMSF-----------INQVLIDESVIGWKEFEYEVV- 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQ 180
            R       I      +D   +     + +       L  V ++ +      +   L++Q
Sbjct: 220 -RDKNDTCIIVCNMENLDP--MGIHTGESVVVAPSQTLSDVDNQRLRNASIKIIRALQIQ 276

Query: 181 GQARIDGGDLF-PNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLD 238
           G   I          YK   + +  +   + L     G     + SKI+          D
Sbjct: 277 GGCNIQFAFNAETGAYKV-IEVNPRVSRSSALASKATGYPIAKISSKIAVGMTLDEIQND 335

Query: 239 IQELRDVSEEDS-REIEAKQHNLSYIALDG---NIGCMVNGAGLAMATMDIIKLYGGAPA 294
           I +    S E S   + AK     +         IG  +   G  M+    I+       
Sbjct: 336 ITKETPASFEPSLDYVVAKIPRWPFDKFKAIKREIGVQMQSTGEVMSIGRTIEESLHKAI 395

Query: 295 NFLDVGGGADQDKVAA 310
             LD+G    +D    
Sbjct: 396 RSLDIGKFGFEDVPYT 411


>gi|298256323|gb|ADI71432.1| putative carbamoyl-phosphate synthase large subunit [Amycolatopsis
           orientalis subsp. vinearia]
          Length = 1104

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 33/161 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++R     V +  V   +      +K L  P+ +         R       L +    
Sbjct: 133 KDIVRTIGAEVPRSRVCHDMAEVRDTVKELGLPVVI---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +                TG T S V  V +E+     +E  L L+ D+  
Sbjct: 181 ---MAHTPEDLERLAS-----------TGLTESPVTEVLIEESVLGWKEYELELMRDKHD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
            +V           IE V          + + P + +T  +
Sbjct: 227 NVVVV-------CSIENVDAMGVHTGDSVTVAPTMTLTDRE 260



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 23/68 (33%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    +P  +    +S   A+     +  P+ V  S +  G   +  + E       G
Sbjct: 686 EVLTDAGLPAPRYGTATSFEGAKRIADEIGYPVLVRPSYVLGGRGMEIVYDEETLAGYIG 745

Query: 70  VRVESSLK 77
              E + +
Sbjct: 746 RATEITPE 753


>gi|291298960|ref|YP_003510238.1| K+-transporting ATPase subunit B [Stackebrandtia nassauensis DSM
           44728]
 gi|290568180|gb|ADD41145.1| K+-transporting ATPase, B subunit [Stackebrandtia nassauensis DSM
           44728]
          Length = 712

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 8/132 (6%)

Query: 256 KQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKII 315
            Q  +S + LD + G      G A A +D +K  GG P N  ++     Q+        +
Sbjct: 399 AQTRMSGVDLDEDGGTHHIRKGAAAAVLDWVKDNGGTPGNASELVDQISQE----GGTPL 454

Query: 316 TSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESG 375
                  G    + G I   DV+ +G++    +++      + + G N      + AE+G
Sbjct: 455 LVAERKPGRQARVLGVIHLKDVVKEGMVERFAKLRQMGIRTVMVTGDNPLTAKAIAAEAG 514

Query: 376 LNVITAIDLDDA 387
           ++      L +A
Sbjct: 515 VD----DFLAEA 522


>gi|330957833|gb|EGH58093.1| urea amidolyase-like protein [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 817

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 34/212 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ AA +A +++  P+                 K      
Sbjct: 119 ARALARQHGVPLLEGTELLDSLEAAIAAARSIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQARI 185
              ++A       G+    V +   + + +    P   +       L    ++L      
Sbjct: 217 QGDVLAL------GVRDCSVQRRNQKVLEET---PAPNLPDSMADELCAAAIKLARAVNY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                   ++ +  D+    LE+N  + +++G
Sbjct: 268 RSAGTVEFVFDS-EDQRFYFLEVNTRLQVEHG 298


>gi|311897244|dbj|BAJ29652.1| putative phosphoribosylamine--glycine ligase [Kitasatospora setae
           KM-6054]
          Length = 414

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++   A  A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAGVPTARSYVCATEREAAEALDAFGAP-YVVKDDGLAAGKG 152


>gi|253575051|ref|ZP_04852390.1| phosphoribosylamine-glycine ligase [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251845507|gb|EES73516.1| phosphoribosylamine-glycine ligase [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 423

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+KYN+P A          A   +++ P P+ V+K+   A G+              
Sbjct: 107 KDLLKKYNIPTAAYEKFDKYEQALKYLQSRPVPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + ++ I    ++ K  G +G   + V +E+  +      LS + D  +
Sbjct: 152 GVTVAFTREEAETALKNI----MVDKVFGESG---SQVVIEEFLEGQEMSILSFV-DGET 203

Query: 129 GMVAFIA 135
                 A
Sbjct: 204 VRPMVAA 210


>gi|193204318|ref|NP_495838.2| PYRimidine biosynthesis family member (pyr-1) [Caenorhabditis
           elegans]
 gi|161352981|emb|CAA91059.2| C. elegans protein D2085.1, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 2198

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 63/225 (28%), Gaps = 46/225 (20%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +        VA     +++  A  A + L  P+ V  +    G            
Sbjct: 512 RDLFNQEISAIGEKVAPSKAATTMEGAIEAAEELGYPVLVRAAYALGGL----------- 560

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G     + + +I+  ++ L  +             N V V+      +E+   ++ 
Sbjct: 561 ----GSGFADNREELIAIAQQALAHS-------------NQVLVDKSLKGWKEVEYEVVR 603

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D     +          ++E V          +++ P   ++  +          +   L
Sbjct: 604 DAYDNCITV-------CNMENVDPLGIHTGESVVVAPSQTLSDREYNALRTCAIKVIRHL 656

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
            + G+  I       +L     + +  L   + L     G     
Sbjct: 657 GIIGECNIQYALDPYSLTYYIIEVNARLSRSSALASKATGYPLAY 701


>gi|78044438|ref|YP_359925.1| phosphoribosylamine--glycine ligase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996553|gb|ABB15452.1| phosphoribosylamine--glycine ligase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 422

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+R+  +P A     +  + A   +     P+ V+K+   A G+             
Sbjct: 106 AKELMRENGIPTAFYETFTDYNEAREYVYRKGVPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V   L+  I  + +I    +     G  G   N V +E+
Sbjct: 152 -GVYVCQELEEAIKALNDIFVKRIF----GAAG---NKVVIEE 186


>gi|78067091|ref|YP_369860.1| phosphoribosylamine--glycine ligase [Burkholderia sp. 383]
 gi|77967836|gb|ABB09216.1| phosphoribosylamine--glycine ligase [Burkholderia sp. 383]
          Length = 425

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+    S V AA + I     P+ VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYETFSDVAAAHAYIDAKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+     +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHEAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|238793923|ref|ZP_04637542.1| hypothetical protein yinte0001_28290 [Yersinia intermedia ATCC
           29909]
 gi|238726690|gb|EEQ18225.1| hypothetical protein yinte0001_28290 [Yersinia intermedia ATCC
           29909]
          Length = 880

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 77/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  ++S L+I+P++   +
Sbjct: 641 SRGSLQPLDIPGLSRLLVQVSNLILDCPEISRLDIHPVLASGS 683


>gi|251793046|ref|YP_003007772.1| phosphoribosylamine--glycine ligase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534439|gb|ACS97685.1| phosphoribosylamine--glycine ligase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 429

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEEAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|227535062|ref|ZP_03965111.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
           synthetase ammonia chain) [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187277|gb|EEI67344.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
           synthetase ammonia chain) [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K + PV +  + +++  A+     +  P+ +  +                  + G
Sbjct: 133 KNLMQKLHEPVPESAIANNIEEAQQFADKIGFPVIIRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ K +       L  +            V  V VE      +E+   ++ D   
Sbjct: 180 GI--ANNEKELAEIAENGLNLS-----------PVTQVLVERSIAGYKEVEFEVMRDAAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D  + +  +    +   L+++G   +   
Sbjct: 227 SAIVVCNMENFDPVGVHTGDSMVFAPTQTLTDKEVQMLRDAALKIIRALKIEGGCNVQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L  N +K +       +E+NP +   + 
Sbjct: 287 -LDRNSFKYYV------IEVNPRVSRSSA 308


>gi|209528194|ref|ZP_03276664.1| carbamoyl-phosphate synthase, large subunit [Arthrospira maxima
           CS-328]
 gi|209491379|gb|EDZ91764.1| carbamoyl-phosphate synthase, large subunit [Arthrospira maxima
           CS-328]
          Length = 1077

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 52/169 (30%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  V      + ++++ A +  + +     +++     GG G G           
Sbjct: 133 KQAMEKIGVGCCPSGIANNLNEARAIAEQIGSYPLIIRPAFTMGGTGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                   G   S ++ + VE      +E  L ++ D  +
Sbjct: 182 ---IAYNQEEYEELA-----------IAGLDASPMSQILVEQSLIGWKEYELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  I S      IE +          + + P   +T ++   L D  
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDAA 269


>gi|191638448|ref|YP_001987614.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain) [Lactobacillus casei BL23]
 gi|239631462|ref|ZP_04674493.1| carbamoyl-phosphate synthase pyrimidine-specific [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|226700930|sp|B3WEF5|CARB_LACCB RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|190712750|emb|CAQ66756.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain) [Lactobacillus casei BL23]
 gi|239525927|gb|EEQ64928.1| carbamoyl-phosphate synthase pyrimidine-specific [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382480|gb|AEA53956.1| Carbamoyl-phosphate synthase large chain [Lactobacillus casei LC2W]
 gi|327385678|gb|AEA57152.1| Carbamoyl-phosphate synthase large chain [Lactobacillus casei
           BD-II]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K + PV +  + +++  A+     +  P+ +  +                  + G
Sbjct: 133 KNLMQKLHEPVPESAIANNIEEAQQFADKIGFPVIIRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ K +       L  +            V  V VE      +E+   ++ D   
Sbjct: 180 GI--ANNEKELAEIAENGLNLS-----------PVTQVLVERSIAGYKEVEFEVMRDAAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D  + +  +    +   L+++G   +   
Sbjct: 227 SAIVVCNMENFDPVGVHTGDSMVFAPTQTLTDKEVQMLRDAALKIIRALKIEGGCNVQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L  N +K +       +E+NP +   + 
Sbjct: 287 -LDRNSFKYYV------IEVNPRVSRSSA 308


>gi|116494938|ref|YP_806672.1| carbamoylphosphate synthase large subunit [Lactobacillus casei ATCC
           334]
 gi|122263644|sp|Q038Z2|CARB_LACC3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|116105088|gb|ABJ70230.1| carbamoyl-phosphate synthase large subunit [Lactobacillus casei
           ATCC 334]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K + PV +  + +++  A+     +  P+ +  +                  + G
Sbjct: 133 KNLMQKLHEPVPESAIANNIEEAQQFADKIGFPVIIRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ K +       L  +            V  V VE      +E+   ++ D   
Sbjct: 180 GI--ANNEKELAEIAENGLNLS-----------PVTQVLVERSIAGYKEVEFEVMRDAAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D  + +  +    +   L+++G   +   
Sbjct: 227 SAIVVCNMENFDPVGVHTGDSMVFAPTQTLTDKEVQMLRDAALKIIRALKIEGGCNVQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L  N +K +       +E+NP +   + 
Sbjct: 287 -LDRNSFKYYV------IEVNPRVSRSSA 308


>gi|260949951|ref|XP_002619272.1| hypothetical protein CLUG_00431 [Clavispora lusitaniae ATCC 42720]
 gi|238846844|gb|EEQ36308.1| hypothetical protein CLUG_00431 [Clavispora lusitaniae ATCC 42720]
          Length = 1132

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 66/220 (30%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++P+A+ + + +V AA  A   +  P+ V         R       L +       
Sbjct: 180 LKEIDIPIAESIAVETVDAALEAAANVGYPIIV---------RSAYSLGGLGSG------ 224

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             +S + +     + L             S    + VE      +E+   ++ D+    +
Sbjct: 225 FAASEQELRDLAAQSL-------------SLAPQILVEKSLKGWKEVEYEVVRDKDGNCI 271

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 272 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRSAAIKIIRHLGVVGECN 324

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 325 VQYALQPDGLDFRVIEVNARLSRSSALASKATGYPLAYTA 364


>gi|207345559|gb|EDZ72337.1| YGL234Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 737

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|195997897|ref|XP_002108817.1| hypothetical protein TRIADDRAFT_49717 [Trichoplax adhaerens]
 gi|190589593|gb|EDV29615.1| hypothetical protein TRIADDRAFT_49717 [Trichoplax adhaerens]
          Length = 693

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 31/211 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A      +  P+ +  S                 
Sbjct: 145 ESKLLAKNAKVNTIPGFDGVVKDADEAVKIANDIGYPVMIKAS---------------AG 189

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + +      R        + Q   +    + + +E   D  R + L +L+
Sbjct: 190 GGGKGMRIAWNDEEAREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIELQVLL 242

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLE-LQGQ 182
           D+      F+   +    I+   +   ++     ++P       E   +L   +      
Sbjct: 243 DQHGNG-VFLNERE--CSIQRRNQKVIEEAPSTFLNPETRAAMGEQALALASAVGYFSAG 299

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLII 213
                 D   N Y  F + +  L   +P+  
Sbjct: 300 TVEFLVDSKRNFY--FLEMNTRLQVEHPITE 328


>gi|42782979|ref|NP_980226.1| carbamoyl phosphate synthase large subunit [Bacillus cereus ATCC
           10987]
 gi|81830987|sp|Q732I3|CARB_BACC1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|42738906|gb|AAS42834.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus ATCC
           10987]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|315637149|ref|ZP_07892371.1| phosphoribosylamine-glycine ligase [Arcobacter butzleri JV22]
 gi|315478516|gb|EFU69227.1| phosphoribosylamine-glycine ligase [Arcobacter butzleri JV22]
          Length = 420

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+KYN+P A  +  S+   A   I+T+  P+ VVK+     G+              
Sbjct: 104 KNILKKYNIPTAAFIETSNEKEAHDFIETMNLPI-VVKADGLCAGK-------------- 148

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S     + + ++L         G  G     V VE+  D
Sbjct: 149 GVIIAQSKDEAKTAVSDML----SGASFGDAG---TSVVVEEYLD 186


>gi|301066501|ref|YP_003788524.1| carbamoylphosphate synthase large subunit [Lactobacillus casei str.
           Zhang]
 gi|300438908|gb|ADK18674.1| Carbamoylphosphate synthase large subunit [Lactobacillus casei str.
           Zhang]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K + PV +  + +++  A+     +  P+ +  +                  + G
Sbjct: 133 KNLMQKLHEPVPESAIANNIEEAQQFADKIGFPVIIRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ K +       L  +            V  V VE      +E+   ++ D   
Sbjct: 180 GI--ANNEKELAEIAENGLNLS-----------PVTQVLVERSIAGYKEVEFEVMRDAAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D  + +  +    +   L+++G   +   
Sbjct: 227 SAIVVCNMENFDPVGVHTGDSMVFAPTQTLTDKEVQMLRDAALKIIRALKIEGGCNVQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L  N +K +       +E+NP +   + 
Sbjct: 287 -LDRNSFKYYV------IEVNPRVSRSSA 308


>gi|257876897|ref|ZP_05656550.1| phosphoribosylglycinamide synthetase [Enterococcus casseliflavus
           EC20]
 gi|257811063|gb|EEV39883.1| phosphoribosylglycinamide synthetase [Enterococcus casseliflavus
           EC20]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+R  ++P A     +    A++ I+ L G   V+K+   A G+             
Sbjct: 107 AKELMRANHIPTADYQSFTDSAQAKAYIQ-LKGAPIVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  ++    + +  +L         G +G+    V +E+      E  L   V   
Sbjct: 153 -GVVVAETVDEANAAVEAMLEQ----NAFGESGA---KVVIEEFL-AGEEFSLLAFVKDE 203

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 204 AVYPMVIA 211


>gi|169831058|ref|YP_001717040.1| ATP-grasp domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637902|gb|ACA59408.1| ATP-grasp domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 700

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 74/233 (31%), Gaps = 41/233 (17%)

Query: 198 FCDKDMSLLEINPLIIMKNGRLRV--------LDSKISFD--DNALYRHLDIQELRDVSE 247
           F +    +    P++++K+G  +           +    D      +R   +  +  ++E
Sbjct: 223 FLEVSSQVCRKKPIVVLKSGTSQAGAQAASSHTGALAGIDLAYEVAFRQAGVIRVPTMAE 282

Query: 248 EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF----------- 296
                +   Q     +     +  + N  G  +   D  +  G   A F           
Sbjct: 283 LFDLAVAFAQQP---VPKGDRLAIVTNSGGPGIVATDSAERQGLTIARFNKATLEALRAE 339

Query: 297 ----------LDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSA 345
                     +DV G A  D+   A + + +D SV   ++ +            K I+  
Sbjct: 340 LPREANIYNPVDVLGDARADRYRFALEKVLADESVDSAVVLVCPTATAEPGETAKAIVEV 399

Query: 346 VKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKGV 398
            +         + + G  +  G  +++ +G+   T  +        + A++G+
Sbjct: 400 ARRFPDKPLFGVYMGGEILKEGVDILSAAGIPCYTFPET------AISAMRGL 446


>gi|156743408|ref|YP_001433537.1| lysine biosynthesis enzyme LysX [Roseiflexus castenholzii DSM
           13941]
 gi|156234736|gb|ABU59519.1| lysine biosynthesis enzyme LysX [Roseiflexus castenholzii DSM
           13941]
          Length = 285

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 13/76 (17%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           +  VP  +  +  +  +A  AI+ L  P  V+K  I + GR   +  +            
Sbjct: 96  RAGVPTPRTRMAFTPESALRAIEDLGYP-AVLKPAIGSWGRLIAKVND------------ 142

Query: 74  SSLKSVISDIREILGS 89
                 + + ++ILGS
Sbjct: 143 REAAEALLEHKQILGS 158


>gi|187478699|ref|YP_786723.1| phosphoribosylamine--glycine ligase [Bordetella avium 197N]
 gi|115423285|emb|CAJ49818.1| phosphoribosylamine--glycine ligase [Bordetella avium 197N]
          Length = 445

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 22/120 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++N+P A+    +    A + +     P+ V+K+   A G+             
Sbjct: 118 AKAFMVRHNIPTARYQTFTDPALAHAYVDQEGAPI-VIKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+   + I  +LG        G  G     V +E+        ++ ++  R 
Sbjct: 164 -GVVVAATLEEAHAAIDAMLG-------DGSLGHAGARVVIEECLQGEEASFIVMVDGRN 215


>gi|331695454|ref|YP_004331693.1| methylcrotonoyl-CoA carboxylase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950143|gb|AEA23840.1| Methylcrotonoyl-CoA carboxylase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 664

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 12/103 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +AKAL+    VPV  G  ++           +  P+ V K+    GGRG           
Sbjct: 123 EAKALMEAAGVPVLPGATVTDETDLSVEADRIGFPVLV-KAAFGGGGRGM---------- 171

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
              V    SL+  +   R    S             V+  +VE
Sbjct: 172 -RIVHDADSLREAVDGARREAASAFGDGTVFLERYVVDPRHVE 213


>gi|293609476|ref|ZP_06691778.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827928|gb|EFF86291.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYEVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|224823449|ref|ZP_03696558.1| phosphoribosylamine/glycine ligase [Lutiella nitroferrum 2002]
 gi|224603904|gb|EEG10078.1| phosphoribosylamine/glycine ligase [Lutiella nitroferrum 2002]
          Length = 426

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 85/225 (37%), Gaps = 29/225 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P   G    +  AA  A     G   V+K+   A G+             
Sbjct: 106 AKAFMKRHGIPT-AGYETFTDAAAAHAYVDGKGAPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED  +   E    ++VD  
Sbjct: 152 -GVVVALTLDEAHAAIDDML----VGNKMGSAGARV---VIEDFLE-GEEASFIVMVDGE 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA--RI 185
              V  +A++Q    +++  +  P         P   VT +  A +   + L      + 
Sbjct: 203 H--VLAMATSQDHKRLKDNDEG-PNTGGMGAYSPAPVVTPDVHARVMREIILPTVQGMKK 259

Query: 186 DGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           DG +    LY     D+D +   I       +   + + +++  D
Sbjct: 260 DGHEYTGFLYAGLMIDQDGNPFTIEFNCRFGDPETQPIMARLKSD 304


>gi|222112490|ref|YP_002554754.1| CoA-binding domain-containing protein [Acidovorax ebreus TPSY]
 gi|221731934|gb|ACM34754.1| CoA-binding domain protein [Acidovorax ebreus TPSY]
          Length = 695

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 33/123 (26%), Gaps = 15/123 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +  LL ++ VP     +  +   A +A   +  P  V         + +     L
Sbjct: 480 LNEVDSLGLLARHGVPTVPMHLCRTADEARAAFDAIGAPAVVKACSAEVPHKSEHGLVAL 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       + +                 +    G + + V V        E  +  
Sbjct: 540 N---------VQTREQAAELFER------FWAKMDAMGVQRDGVIVAATRKGQHEFMVGA 584

Query: 123 LVD 125
            +D
Sbjct: 585 RMD 587


>gi|199598366|ref|ZP_03211785.1| Carbamoylphosphate synthase large subunit [Lactobacillus rhamnosus
           HN001]
 gi|258508451|ref|YP_003171202.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           rhamnosus GG]
 gi|199590685|gb|EDY98772.1| Carbamoylphosphate synthase large subunit [Lactobacillus rhamnosus
           HN001]
 gi|257148378|emb|CAR87351.1| Carbamoyl-phosphate synthase, large subunit [Lactobacillus
           rhamnosus GG]
 gi|259649764|dbj|BAI41926.1| carbamoylphosphate synthase large subunit [Lactobacillus rhamnosus
           GG]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K + PV +  + ++V  A+     +  P+ +  +                  + G
Sbjct: 133 KNLMQKLHEPVPESAIANNVQEAQEFADKIGFPVIIRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + K +       L  +            V  V +E      +E+   ++ D + 
Sbjct: 180 GI--ADNEKELAEIAENGLNLS-----------PVTQVLIERSIAGYKEIEFEVMRDASD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D  + +  +    +   L+++G   +   
Sbjct: 227 SAIVVCNMENFDPVGVHTGDSMVFAPTQTLTDKEVQMLRDSALKIIRALKIEGGCNVQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L  N +K +       +E+NP +   + 
Sbjct: 287 -LDRNSFKYYV------IEVNPRVSRSSA 308


>gi|261405694|ref|YP_003241935.1| carbamoyl-phosphate synthase large subunit [Paenibacillus sp.
           Y412MC10]
 gi|261282157|gb|ACX64128.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp.
           Y412MC10]
          Length = 1068

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 74/216 (34%), Gaps = 47/216 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+R+ + PV +  +++++  A      +  P+ V  +    G             + G
Sbjct: 133 RELMRELDQPVPESTIVTTLEEALEFANEIGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ + +   +   L  + IT+             +E     ++E+   ++ D   
Sbjct: 180 GI--CATEEELRETVSSGLRYSPITQC-----------LIEKSIAGMKEVEYEVMRDAND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQG 181
             +          ++E            +++ P   ++  +          +   L ++G
Sbjct: 227 NCIVV-------CNMENFDPVGVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALNIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              +    L PN Y+ +       +E+NP +   + 
Sbjct: 280 GCNVQFA-LDPNSYQYYV------IEVNPRVSRSSA 308


>gi|184201077|ref|YP_001855284.1| putative acetate--CoA ligase [Kocuria rhizophila DC2201]
 gi|183581307|dbj|BAG29778.1| putative acetate--CoA ligase [Kocuria rhizophila DC2201]
          Length = 896

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 36/94 (38%), Gaps = 2/94 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    + V +    +    A +A + L  P+  +K+      R +     +  + +  
Sbjct: 680 ELLSCAGIAVLESARFTDPDEACAAAERLGYPV-ALKTTDPFL-RHRLDLGGVVLNLEDA 737

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            ++ ++++++   +     +    +   PTG  V
Sbjct: 738 EQLRAAIETMRRTLAGWNATDFEVQSMAPTGQTV 771


>gi|324327785|gb|ADY23045.1| carbamoyl phosphate synthase large subunit [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|312793564|ref|YP_004026487.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180704|gb|ADQ40874.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 1075

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 13/105 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+    G    ++  A     +L  P+ V  S +  G   K  F +        
Sbjct: 676 KILNKLNIKRPPGYTCYTLQEALRIANSLGYPVLVRPSYVLGGQGMKIAFDD-------- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +  ++S  + +    ++       G  +    + DG DI
Sbjct: 728 ----DDIVEMLSYAKNLNNHPILID-KYIVGKEIEVDAISDGEDI 767


>gi|311108074|ref|YP_003980927.1| CoA-binding protein [Achromobacter xylosoxidans A8]
 gi|310762763|gb|ADP18212.1| CoA binding domain protein 4 [Achromobacter xylosoxidans A8]
          Length = 713

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 30/232 (12%)

Query: 3   IHEYQAKALLRKYN-VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           + E  +K LLR+   V +  GV++            L  P+ V K Q +         + 
Sbjct: 502 LAECDSKRLLRELGVVGIPDGVLVD-GDLPNGLPAPLSYPV-VAKLQAN---------EV 550

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV +  S    + +    L      +     G     + +E       EL L 
Sbjct: 551 LHKSDIGGVVLGISDDEQLREALLRLRGIARDRGIKAMG-----ILLESMQRFDHELLLG 605

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-----EDVASLCDM 176
           L   R +     +   +GG+++E       + +    +DP   +            L   
Sbjct: 606 L--RRDARFGPMLTLGRGGVEVELDPDVASRLL---PLDPSR-IQEMIESLRSARLLQGF 659

Query: 177 LELQGQARIDGGDLFPNLYKAF-CDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
                            L + F    D++ +EINPL +   G+  VLD+ +S
Sbjct: 660 RGRGAVDLPALARQIACLCEVFLMRPDLAEIEINPLAVSG-GQAWVLDAVVS 710


>gi|301055377|ref|YP_003793588.1| carbamoyl-phosphate synthase large subunit [Bacillus anthracis CI]
 gi|300377546|gb|ADK06450.1| carbamoyl-phosphate synthase large subunit [Bacillus cereus biovar
           anthracis str. CI]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|293192821|ref|ZP_06609716.1| carbamoyl-phosphate synthase, large subunit [Actinomyces
           odontolyticus F0309]
 gi|292820068|gb|EFF79066.1| carbamoyl-phosphate synthase, large subunit [Actinomyces
           odontolyticus F0309]
          Length = 1099

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ +    VA+  +  ++    +A   L  PL V         R       L +    
Sbjct: 133 KEIVERSGAEVARSFIAHTMEECHAAAAELGYPLVV---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 +   +     + L +++ T+           V +E+     +E  L L+ D+  
Sbjct: 181 ---FAYTPDDLERIAGQGLAASITTE-----------VLLEESILGWKEYELELMRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +V           IE V          + + P + +T  ++  L D+
Sbjct: 227 NVVVV-------CSIENVDPVGVHTGDSITVAPALTLTDREMQRLRDI 267


>gi|291279616|ref|YP_003496451.1| propionyl-CoA carboxylase subunit alpha [Deferribacter
           desulfuricans SSM1]
 gi|290754318|dbj|BAI80695.1| propionyl-CoA carboxylase, alpha subunit [Deferribacter
           desulfuricans SSM1]
          Length = 506

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +++  VPV  G    +  +  A+     +  P+ ++K+ +H GG    R  E P D
Sbjct: 120 ARKAMQEAGVPVVPGTKDPVEDLEEAKKVADEIGYPI-MLKA-VHGGGGKGMRLVEKPED 177

Query: 66  SKGGVRVESS 75
            +   R   S
Sbjct: 178 LESAFRTAQS 187


>gi|284042275|ref|YP_003392615.1| phosphoribosylamine/glycine ligase [Conexibacter woesei DSM 14684]
 gi|283946496|gb|ADB49240.1| phosphoribosylamine/glycine ligase [Conexibacter woesei DSM 14684]
          Length = 427

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 61/190 (32%), Gaps = 32/190 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++    VP A   V+++V    +AI   P    VVK+   A G+             
Sbjct: 108 SKEIMAAAGVPTAAHTVVTTVEDGMAAIDRYP---IVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + +S +         L + L+  + G     V    V +      EL L  L D  
Sbjct: 152 -GVIIATSEQEARDA----LHAFLVEHRHGTERVVVEEHLVGE------ELSLLALCDGE 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ--GQARI 185
                 +A  Q    I +     P         P+ G+ +     LC  +      +   
Sbjct: 201 --RAIAMAPAQDYKRIFDGDAG-PNTGGMGSYSPVPGIDAARAQELCAQVHQPIVDELAR 257

Query: 186 DGGDLFPNLY 195
            G      LY
Sbjct: 258 RGTPFHGVLY 267


>gi|254721419|ref|ZP_05183208.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           A1055]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|228916524|ref|ZP_04080090.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228843103|gb|EEM88185.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229075644|ref|ZP_04208626.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock4-18]
 gi|228707420|gb|EEL59611.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock4-18]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229098357|ref|ZP_04229303.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-29]
 gi|229104449|ref|ZP_04235117.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-28]
 gi|229117382|ref|ZP_04246759.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock1-3]
 gi|228666082|gb|EEL21547.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock1-3]
 gi|228678971|gb|EEL33180.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-28]
 gi|228685062|gb|EEL38994.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-29]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|228928935|ref|ZP_04091967.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228947606|ref|ZP_04109896.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229123400|ref|ZP_04252604.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus 95/8201]
 gi|228660176|gb|EEL15812.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus 95/8201]
 gi|228812126|gb|EEM58457.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228830742|gb|EEM76347.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|170688824|ref|ZP_02880027.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0465]
 gi|170667179|gb|EDT17939.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0465]
          Length = 1073

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 675 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 715


>gi|167636429|ref|ZP_02394728.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0442]
 gi|254739826|ref|ZP_05197519.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           Kruger B]
 gi|167528171|gb|EDR90958.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0442]
          Length = 1071

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 673 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 713


>gi|196035930|ref|ZP_03103332.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus W]
 gi|218905016|ref|YP_002452850.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus AH820]
 gi|254683404|ref|ZP_05147264.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           CNEVA-9066]
 gi|226700918|sp|B7JJX3|CARB_BACC0 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|195991579|gb|EDX55545.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus W]
 gi|218534976|gb|ACK87374.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus AH820]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|206976709|ref|ZP_03237613.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           H3081.97]
 gi|217961307|ref|YP_002339875.1| carbamoyl phosphate synthase large subunit [Bacillus cereus AH187]
 gi|222097332|ref|YP_002531389.1| carbamoyl phosphate synthase large subunit [Bacillus cereus Q1]
 gi|226700921|sp|B7HLM0|CARB_BACC7 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|254813558|sp|B9IVW3|CARB_BACCQ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|206745019|gb|EDZ56422.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           H3081.97]
 gi|217067322|gb|ACJ81572.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus AH187]
 gi|221241390|gb|ACM14100.1| carbamoyl-phosphate synthase [Bacillus cereus Q1]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|118479107|ref|YP_896258.1| carbamoyl phosphate synthase large subunit [Bacillus thuringiensis
           str. Al Hakam]
 gi|196047414|ref|ZP_03114626.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           03BB108]
 gi|225865868|ref|YP_002751246.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           03BB102]
 gi|166989832|sp|A0RHQ8|CARB_BACAH RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|254813557|sp|C1EPQ0|CARB_BACC3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|118418332|gb|ABK86751.1| carbamoyl-phosphate synthase large subunit [Bacillus thuringiensis
           str. Al Hakam]
 gi|196021722|gb|EDX60417.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           03BB108]
 gi|225790296|gb|ACO30513.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           03BB102]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|62086811|dbj|BAD92012.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Caiman crocodilus]
          Length = 866

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 21/103 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA L ++ +P A+    +S   A S I     P  VVK+   A G+             
Sbjct: 90  SKAFLDRHGIPTAQWKAFTSPKEACSFITNADFPALVVKASGLAAGK------------- 136

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V S+ +     + EI    +  K  G  G     V +E+
Sbjct: 137 -GVIVASNKEEACKAVHEI----MQDKTFGAAG---ETVVIEE 171


>gi|49479112|ref|YP_037948.1| carbamoyl phosphate synthase large subunit [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|81828222|sp|Q6HES8|CARB_BACHK RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|49330668|gb|AAT61314.1| carbamoyl-phosphate synthase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|30021975|ref|NP_833606.1| carbamoyl phosphate synthase large subunit [Bacillus cereus ATCC
           14579]
 gi|296504381|ref|YP_003666081.1| carbamoyl phosphate synthase large subunit [Bacillus thuringiensis
           BMB171]
 gi|81433833|sp|Q819S3|CARB_BACCR RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|29897531|gb|AAP10807.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus ATCC
           14579]
 gi|296325433|gb|ADH08361.1| carbamoyl phosphate synthase large subunit [Bacillus thuringiensis
           BMB171]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|20809114|ref|NP_624285.1| UDP-N-acetylmuramyl tripeptide synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|20517793|gb|AAM25889.1| UDP-N-acetylmuramyl tripeptide synthase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 879

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 9/116 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+ + +PV +G V  +   A S  + L  P+ V+K   + G +GKG    +    + 
Sbjct: 217 KKILKDHGLPVPEGDVAYNEEEAISIAEELGYPV-VIKP--YNGNQGKGVHLNISNREEV 273

Query: 69  GV--RVESSLKSVISDIREILGS----TLITKQTGPTGSRVNCVYVEDGADILREL 118
            +  R   +   ++   ++I G      ++ ++      R+    + DG   ++EL
Sbjct: 274 VIAYRNAKNYSDLVMVEKQIRGRHYRVLVVGEKVVAVAERIPAHVIGDGVHTVKEL 329


>gi|54310486|ref|YP_131506.1| phosphoribosylamine--glycine ligase [Photobacterium profundum SS9]
 gi|46914929|emb|CAG21704.1| putative phosphoribosylamine-glycine ligase [Photobacterium
           profundum SS9]
          Length = 429

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTAEYQNFTEIEPALAYLQEKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L            G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAENAVRDMLAGNAF-------GKAGHRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|30263889|ref|NP_846266.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           Ames]
 gi|47529318|ref|YP_020667.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49186736|ref|YP_029988.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           Sterne]
 gi|65321214|ref|ZP_00394173.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in
           MJ) [Bacillus anthracis str. A2012]
 gi|165872300|ref|ZP_02216937.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0488]
 gi|167641115|ref|ZP_02399370.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0193]
 gi|170708780|ref|ZP_02899216.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0389]
 gi|177654894|ref|ZP_02936611.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0174]
 gi|190565897|ref|ZP_03018816.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           Tsiankovskii-I]
 gi|227813205|ref|YP_002813214.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. CDC 684]
 gi|229602930|ref|YP_002868122.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0248]
 gi|254735926|ref|ZP_05193632.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           Western North America USA6153]
 gi|254751016|ref|ZP_05203055.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           Vollum]
 gi|254756681|ref|ZP_05208710.1| carbamoyl phosphate synthase large subunit [Bacillus anthracis str.
           Australia 94]
 gi|81837832|sp|Q81WF2|CARB_BACAN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|254813555|sp|C3P656|CARB_BACAA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|254813556|sp|C3L740|CARB_BACAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|30258533|gb|AAP27752.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. Ames]
 gi|47504466|gb|AAT33142.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49180663|gb|AAT56039.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. Sterne]
 gi|164711976|gb|EDR17516.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0488]
 gi|167510895|gb|EDR86286.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0193]
 gi|170126265|gb|EDS95156.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0389]
 gi|172080405|gb|EDT65492.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0174]
 gi|190562816|gb|EDV16782.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           Tsiankovskii-I]
 gi|227005069|gb|ACP14812.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. CDC 684]
 gi|229267338|gb|ACQ48975.1| carbamoyl-phosphate synthase, large subunit [Bacillus anthracis
           str. A0248]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|325122739|gb|ADY82262.1| phosphoribosylamine--glycine ligase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYEVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|313681462|ref|YP_004059200.1| phosphoribosylamine--glycine ligase [Sulfuricurvum kujiense DSM
           16994]
 gi|313154322|gb|ADR33000.1| phosphoribosylamine--glycine ligase [Sulfuricurvum kujiense DSM
           16994]
          Length = 422

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KYN+P A+ +    +  A   I++L  P  VVK+     G+              
Sbjct: 105 KNFLAKYNIPTARYIETDHIGDAFKFIESL-TPPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +     + E+L      K  G  G RV    VE+  D
Sbjct: 150 GVIIAMSYEEAKVAVSEML----SGKSFGDAGKRV---VVEEFLD 187


>gi|312622392|ref|YP_004024005.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202859|gb|ADQ46186.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 1075

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 13/105 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+    G    ++  A     +L  P+ V  S +  G   K  F +        
Sbjct: 676 KILNKLNIKRPPGYTCYTLQEALRIANSLGYPVLVRPSYVLGGQGMKIAFDD-------- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +  ++S  + +    ++       G  +    + DG DI
Sbjct: 728 ----DDIVEMLSYAKNLNNHPILID-KYIVGKEIEVDAISDGEDI 767



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 41/228 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K   PV    V++ V    +  K +  P+ +  +    G             + G
Sbjct: 133 KQLMIKIGEPVVPSEVVNCVEDGLAFAKKIGFPVIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ +  +   R  L  +            V+ + VE      +E+   ++  R S
Sbjct: 180 GI--ANNEEEFVEIARRGLSYS-----------PVHQILVEKSIKGWKEIEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                       +D   V       I   +I P   ++ ++          + D L+++G
Sbjct: 225 NGCLITVCNMENIDP--VGIHTGDSI---VIAPSQTLSDKEYQMLRSSALKIIDALKIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
              +       +   A  + +  +   + L     G     + +KI+ 
Sbjct: 280 GCNVQFALNPDSFEYAVIEVNPRVSRSSALASKATGYPIARIAAKIAL 327


>gi|229552254|ref|ZP_04440979.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
           rhamnosus LMS2-1]
 gi|258539664|ref|YP_003174163.1| carbamoyl-phosphate synthase large subunit [Lactobacillus rhamnosus
           Lc 705]
 gi|229314390|gb|EEN80363.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
           rhamnosus LMS2-1]
 gi|257151340|emb|CAR90312.1| Carbamoyl-phosphate synthase, large subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 1060

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K + PV +  + ++V  A+     +  P+ +  +                  + G
Sbjct: 133 KNLMQKLHEPVPESAIANNVQEAQEFADKIGFPVIIRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + K +       L  +            V  V +E      +E+   ++ D + 
Sbjct: 180 GI--ADNEKELAEIAENGLNLS-----------PVTQVLIERSIAGYKEIEFEVMRDASD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
             +                        + L D  + +  +    +   L+++G   +   
Sbjct: 227 SAIVVCNMENFDPVGVHTGDSMVFAPTQTLTDKEVQMLRDSALKIIRALKIEGGCNVQFA 286

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            L  N +K +       +E+NP +   + 
Sbjct: 287 -LDRNSFKYYV------IEVNPRVSRSSA 308


>gi|161528354|ref|YP_001582180.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Nitrosopumilus maritimus SCM1]
 gi|160339655|gb|ABX12742.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Nitrosopumilus maritimus SCM1]
          Length = 380

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           K  L+++ +PV + + IS++   +  +K    P  +   +    GRG 
Sbjct: 108 KTFLKEHGIPVPEFIEISNIDDVKEGLKKFGYPALLKARRDAYDGRGN 155


>gi|229197998|ref|ZP_04324712.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus m1293]
 gi|228585477|gb|EEK43581.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus m1293]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|210634880|ref|ZP_03298355.1| hypothetical protein COLSTE_02284 [Collinsella stercoris DSM 13279]
 gi|210158595|gb|EEA89566.1| hypothetical protein COLSTE_02284 [Collinsella stercoris DSM 13279]
          Length = 435

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 66/223 (29%), Gaps = 28/223 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ +  +P A      +   +  A     G   VVK+   A G+             
Sbjct: 113 SKELMARAGIPTAAYG-SFTDEESALAYVREQGAPVVVKADGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L   +  + E           G  G   + V +E+      E  L    D  
Sbjct: 159 -GVVVALTLDEALDAVHECFD-----GAFGAAG---STVVIEEMLT-GPECTLLAFTDGK 208

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-D 186
           +       +T             P      +  P+  VT E+   +C +L         +
Sbjct: 209 TVRPM---ATSQDHKRALEGDKGPNTGGMGVYSPVPIVTPEEHEEMCRILNETIAQANRE 265

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           G D    LY  F         I       +    VL  +++ D
Sbjct: 266 GIDFRGCLYGGFMLTPAGPKVIEYNARFGDPETEVLMPRLASD 308


>gi|209524823|ref|ZP_03273369.1| cyanophycin synthetase [Arthrospira maxima CS-328]
 gi|209494702|gb|EDZ95011.1| cyanophycin synthetase [Arthrospira maxima CS-328]
          Length = 895

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 19/104 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR   +PV +G VI        AI+ + G    +K               L  +   
Sbjct: 224 KQVLRDAGIPVPRGTVIRYFEDLSDAIEDVGGYPIAIKP--------------LDGNHGR 269

Query: 69  GVRVESSLKS----VISDIREILGSTLITKQTGPTGSRVNCVYV 108
           G+ ++ +             E   +  +  +    G   + V V
Sbjct: 270 GITLDVTRWETAQTAYDAASEASKTRSVIIERFYKGRD-HRVLV 312


>gi|118590616|ref|ZP_01548017.1| hypothetical protein SIAM614_05598 [Stappia aggregata IAM 12614]
 gi|118436592|gb|EAV43232.1| hypothetical protein SIAM614_05598 [Stappia aggregata IAM 12614]
          Length = 909

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L  Y++P+    + ++   A    +         K+  H   +         +   G 
Sbjct: 504 AILEAYDLPIMATAMAATPEEAAQVSEPFF------KTAAHCVAKLISPDLPFKSRIDGV 557

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                S ++V    +E++  T                 +ED      ELY+ +  +    
Sbjct: 558 RLGLESPEAVRKAAQELIQKTRRDYPDARIDGISIHPMLEDR--HGLELYMGV-AETQDF 614

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV--TSEDVASLCDMLELQGQARIDG 187
               +    GG  IEE ++D   ++  L ++    +   +     L          +   
Sbjct: 615 GPVLVF-GHGGTAIEE-SEDIALELPPLDLNLAEALIARTRIARLLDGGPARPALDKAAL 672

Query: 188 GDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +    L +   D  ++  L+INPL+ + +G L  LD++++ 
Sbjct: 673 AEALVKLSQITVDIPEIQELDINPLVALPSG-LIGLDARMTL 713


>gi|326941656|gb|AEA17552.1| carbamoyl phosphate synthase large subunit [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|260889213|ref|ZP_05900476.1| phosphoribosylamine--glycine ligase [Leptotrichia hofstadii F0254]
 gi|260861273|gb|EEX75773.1| phosphoribosylamine--glycine ligase [Leptotrichia hofstadii F0254]
          Length = 421

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 24/138 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY +  A   +  +   A+  +        V+K+   A G+             
Sbjct: 106 SKDFMKKYGIKTAVYEIFDNSEKAKEFLNNWKNFPVVIKASGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L   I  + +I    ++ ++ G  G   + V +E+  D +     S+L    
Sbjct: 153 -GVIIAQNLDEAIRAVEDI----MVDEKFGNAG---SQVVIEEFLDGVE---ASILSFTD 201

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++  + S +    I E
Sbjct: 202 SKVIVPLLSAKDHKKIGE 219


>gi|228935202|ref|ZP_04098028.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824367|gb|EEM70173.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|228954163|ref|ZP_04116191.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805483|gb|EEM52074.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|228987031|ref|ZP_04147156.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228772625|gb|EEM21066.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229071386|ref|ZP_04204608.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus F65185]
 gi|228711677|gb|EEL63630.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus F65185]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229140535|ref|ZP_04269090.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-ST26]
 gi|228643096|gb|EEK99372.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-ST26]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|228960104|ref|ZP_04121768.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229047571|ref|ZP_04193161.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH676]
 gi|229111356|ref|ZP_04240909.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock1-15]
 gi|229129164|ref|ZP_04258137.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-Cer4]
 gi|229146458|ref|ZP_04274829.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-ST24]
 gi|228637091|gb|EEK93550.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-ST24]
 gi|228654401|gb|EEL10266.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-Cer4]
 gi|228672132|gb|EEL27423.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock1-15]
 gi|228723818|gb|EEL75173.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH676]
 gi|228799620|gb|EEM46573.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229081139|ref|ZP_04213649.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock4-2]
 gi|229152084|ref|ZP_04280279.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus m1550]
 gi|228631433|gb|EEK88067.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus m1550]
 gi|228702183|gb|EEL54659.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock4-2]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229157465|ref|ZP_04285542.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus ATCC
           4342]
 gi|228625915|gb|EEK82665.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus ATCC
           4342]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229186127|ref|ZP_04313296.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus BGSC 6E1]
 gi|228597303|gb|EEK54954.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus BGSC 6E1]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|218232482|ref|YP_002368686.1| carbamoyl phosphate synthase large subunit [Bacillus cereus B4264]
 gi|226700920|sp|B7H6M2|CARB_BACC4 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|218160439|gb|ACK60431.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus B4264]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|196038725|ref|ZP_03106033.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           NVH0597-99]
 gi|196030448|gb|EDX69047.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           NVH0597-99]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|52141604|ref|YP_085227.1| carbamoyl phosphate synthase large subunit [Bacillus cereus E33L]
 gi|81824210|sp|Q636E0|CARB_BACCZ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|51975073|gb|AAU16623.1| carbamoyl-phosphate synthase [Bacillus cereus E33L]
          Length = 1072

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|16330482|ref|NP_441210.1| cyanophycin synthetase [Synechocystis sp. PCC 6803]
 gi|8134384|sp|P73833|CPHA_SYNY3 RecName: Full=Cyanophycin synthetase; AltName: Full=Cyanophycin
           synthase
 gi|1652973|dbj|BAA17890.1| slr2002 [Synechocystis sp. PCC 6803]
          Length = 873

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 21/47 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L+   +PV +G  I      E AI  + G   V+K      GRG
Sbjct: 224 KTILQDAGIPVPRGTTIQYFDDLEEAINDVGGYPVVIKPLDGNHGRG 270


>gi|320588452|gb|EFX00921.1| carbamoyl-phosphate large subunit [Grosmannia clavigera kw1407]
          Length = 1188

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 49/233 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +     N+P+A+   + +V  A +A KT+  P+ V  +    G            
Sbjct: 222 RDLFARALDEINIPIAQSTAVGTVDEALAAAKTVGYPIIVRAAYALGGL----------- 270

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G    +    +       L  +               + VE      +E+   ++ 
Sbjct: 271 ----GSGFANDEAELRDLAARSLTLS-------------PQILVEKSLKGWKEVEYEVVR 313

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D ++  +          ++E            +++ P   ++ E+          +   L
Sbjct: 314 DASNNCITV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHL 366

Query: 178 ELQGQARIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
            + G+  +        L Y+   + +  L   + L     G       +KI  
Sbjct: 367 GVVGECNVQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 418


>gi|319936915|ref|ZP_08011326.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. 29_1]
 gi|319808014|gb|EFW04589.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. 29_1]
          Length = 1065

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +   KG  + ++  A    + L  P+ V  S +  G   +    +       G
Sbjct: 673 EILEKCGIDRPKGSTVFTIEEAIETAQRLGYPVLVRPSYVLGGAGMEIALNDGDVKKFMG 732

Query: 70  V 70
           +
Sbjct: 733 I 733


>gi|289706922|ref|ZP_06503259.1| CoA binding domain protein [Micrococcus luteus SK58]
 gi|289556357|gb|EFD49711.1| CoA binding domain protein [Micrococcus luteus SK58]
          Length = 892

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 2/93 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y + V       +   A +A   L  P+ +     H   R       L       +
Sbjct: 676 LLGHYGITVLPSARFETADEAVAAAGRLGFPVALKAVDPHLRHRLDLGGVRLNVVDADSL 735

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           R   +++ +   +       L  +   P G   
Sbjct: 736 R--RNVEQMRRLLAPFGVRELEVQAMAPAGQAC 766


>gi|87125585|ref|ZP_01081430.1| possible ribosomal protein S6 modification protein [Synechococcus
           sp. RS9917]
 gi|86166885|gb|EAQ68147.1| possible ribosomal protein S6 modification protein [Synechococcus
           sp. RS9917]
          Length = 465

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 6/102 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A  L  ++ + V      SS    +  IK + G   +VK    A GRG     E    ++
Sbjct: 267 ASQLFVRHGLNVPVTGFASSPLDTKDLIKMVGGAPLIVKLLEGAQGRG-VVLAETQKAAE 325

Query: 68  GGVRVESSLKS---VISDIREILGSTLITKQTGPTGSRVNCV 106
             +    S+ +   V   I+E  G  L     G  G  V  +
Sbjct: 326 SVINAMKSINANLLVQEFIKEAGGKDLRCFVMG--GKVVAAI 365


>gi|329938559|ref|ZP_08287984.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329302532|gb|EGG46423.1| acyl-CoA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 900

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 27/226 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL-----YVVKSQIHAGGRGKGRFKELPA 64
            LL  Y +P        S   A  A + L G        V+K+                 
Sbjct: 681 DLLACYGIPQQPWEWAESEDEAVLAAERLRGTDGTDGAVVLKAHWPGLV---------HK 731

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +  V ++   ++ +    + L +      TG        V V+  A    EL+  ++ 
Sbjct: 732 SLQHAVHLDLRDEAQVRAAHQDLRARFEGLMTG--------VVVQPLATRGTELFTGVVQ 783

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQA 183
           D   G +       GG   E +A    +       D    +T+   A L    L      
Sbjct: 784 DGVFGPLVVFG--LGGTATEVLADHAARLAPLTDHDVHDLITAPRCAPLLFGALGGGPVD 841

Query: 184 RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                 +     +   D   ++  + NP++    G + VLD++I  
Sbjct: 842 LRALEQVLHRASRMATDLPQLAEADFNPVLARPGG-VTVLDARIRL 886


>gi|329922673|ref|ZP_08278225.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp.
           HGF5]
 gi|328942015|gb|EGG38298.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp.
           HGF5]
          Length = 1068

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 74/216 (34%), Gaps = 47/216 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+R+ + PV +  +++++  A      +  P+ V  +    G             + G
Sbjct: 133 RELMRELDQPVPESTIVTTLEEALEFANEIGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ + +   +   L  + IT+             +E     ++E+   ++ D   
Sbjct: 180 GI--CATEEELRETVSSGLRYSPITQC-----------LIEKSIAGMKEVEYEVMRDAND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQG 181
             +          ++E            +++ P   ++  +          +   L ++G
Sbjct: 227 NCIVV-------CNMENFDPVGVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALNIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              +    L PN Y+ +       +E+NP +   + 
Sbjct: 280 GCNVQFA-LDPNSYQYYV------IEVNPRVSRSSA 308


>gi|228940975|ref|ZP_04103533.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973906|ref|ZP_04134481.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980495|ref|ZP_04140805.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           Bt407]
 gi|228779315|gb|EEM27572.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           Bt407]
 gi|228785772|gb|EEM33776.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818654|gb|EEM64721.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 1018

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|82592710|gb|ABB84526.1| unknown [Myxococcus xanthus]
          Length = 472

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 94/336 (27%), Gaps = 46/336 (13%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+ L+    VPV  G   V+  V +A +  + +  P+ V  +                 
Sbjct: 140 QARKLVSAAGVPVVPGSEGVVPDVASALAEAERIGYPVLVKAA---------------SG 184

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+ V  +   +    R+           G  G     VYVE      R + + +L 
Sbjct: 185 GGGIGMAVARNAAEMEKVYRQCTDR--AKAAFGKEG-----VYVERYFPAPRHIEVQILG 237

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D+       I   +    I+   +   ++   +L     G   E    L        +A 
Sbjct: 238 DQHGH---LIHCLERECSIQRRHQKVVEEAPSVLF--ADGRNPELAQKLFTAAVAAAKAF 292

Query: 185 IDG-GDLFPNLYK----AFCDKDMSLLEINPLIIMKNG-------RLRVLDSKISFDDNA 232
                     LY      F + +  L   +P+  +  G              +++     
Sbjct: 293 GYANAGTVEFLYSDGEVYFIEMNARLQVEHPVTELTTGLDLIGWQLRIAAGERLTVKQED 352

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           + R     E R  +E+  +   +      +    G    +  G G               
Sbjct: 353 VKRRGAALEFRIYAEDPVKFFPSPGPLKVFQPPTGEGVRLDAGYGEGNTVTP-----NYD 407

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           P     +  G  + +             ++GI  NI
Sbjct: 408 PMIAKLIVTGETRAQAIERSVTALQSFRIEGIKTNI 443


>gi|86158154|ref|YP_464939.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85774665|gb|ABC81502.1| carbamoyl-phosphate synthase large subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 1077

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V + K    +S   A +  + +  P+ +             R         G
Sbjct: 133 KEAMERVGVELPKSGYATSWEEARAIARDIGFPIII-------------RPSFTMGGEGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +L+      R  L  +             + +  E+     +E  L ++ DR  
Sbjct: 180 GV--AYNLEEFEPLARRALTLS-----------PTHTILCEESIIGWKEYELEVMRDRK- 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE            + + P   +T ++   + + 
Sbjct: 226 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRMREA 267


>gi|85859900|ref|YP_462102.1| acetyl-CoA synthetase (NDP-forming) subunit beta [Syntrophus
           aciditrophicus SB]
 gi|85722991|gb|ABC77934.1| acetyl-CoA synthetase (NDP-forming) beta subunit [Syntrophus
           aciditrophicus SB]
          Length = 228

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 18/223 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A   L K  +P+ K V+    + A      +  P+ +  S      + +     +    
Sbjct: 22  EAFDFLEKEGIPILKTVLAKDENEAVMTASQIGFPVALKVSSPDIVHKTETGGIRVNLKD 81

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +G VR   +               + T  +   G R+  V V        EL +  + D+
Sbjct: 82  EGEVRAAFTE-------------IVRTFTSDHPGQRLEGVVV-QKLGKGLELIVGTMTDQ 127

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             G    +    GG+ +E +     + I     D    +    V  +      +      
Sbjct: 128 QFG-PVIMFGL-GGIFVEALNDVSFRLIPLEARDAKEIMEDLQVYKILKNPRGEKVNLEA 185

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             +    +        ++  +++NP+     G + V D++I  
Sbjct: 186 VQNFILQVSCLVDKHPEIREMDLNPIFASPKG-VEVCDARIKI 227


>gi|24213427|ref|NP_710908.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45658713|ref|YP_002799.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|73917672|sp|Q72NF1|CARB_LEPIC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|73917673|sp|Q8F832|CARB_LEPIN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|24194193|gb|AAN47926.1| carbamoyl phosphate synthase large subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601957|gb|AAS71436.1| carbamoyl-phosphate synthase large chain [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 1106

 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 31/134 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      V V    + +++  A      L  PL V  +    G            
Sbjct: 129 RELFKKAMEKIGVRVPASGLANNLKDAVEIKNKLGLPLIVRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              G    E + + V+S               G   S ++ V +E+     +E  L ++ 
Sbjct: 177 TGGGIAYTEETFEEVVS--------------KGLKASPISQVLLEESVLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           D  +  V  I S +
Sbjct: 223 D-LADNVVIICSIE 235



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +   +  + +S+  A      +  P+ V  S +  G
Sbjct: 708 EVLEKLKLNSPESGIATSMEEAREIAHKIGYPVLVRPSYVLGG 750


>gi|256828081|ref|YP_003156809.1| phosphoribosylamine/glycine ligase [Desulfomicrobium baculatum DSM
           4028]
 gi|256577257|gb|ACU88393.1| phosphoribosylamine/glycine ligase [Desulfomicrobium baculatum DSM
           4028]
          Length = 424

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R+  VP A+  V  S   A            V+K+   A G+             
Sbjct: 106 AKNMMRETGVPTARFQVFDSYERA-LVYVRGHSLPMVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S+      ++++    +ITK  G  G  V    VE+   I  E       D +
Sbjct: 152 -GVVIAQSMSEAEEALKDM----MITKVFGEAGLTV---VVEEAL-IGEEASFMAFCDGS 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 TIVPM 207


>gi|222085556|ref|YP_002544086.1| D-alanine-D-alanine ligase protein [Agrobacterium radiobacter K84]
 gi|221723004|gb|ACM26160.1| D-alanine-D-alanine ligase protein [Agrobacterium radiobacter K84]
          Length = 355

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 31/118 (26%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA--ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK LLR   +PVA+ + +        E A   L  P++V               K +   
Sbjct: 141 AKRLLRDAGLPVARSITVRPGDTLSFEEAASALGSPVFV---------------KPVRQG 185

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           S  GV   ++ +   + + E                  + V +E+     RE+  ++L
Sbjct: 186 SSVGVSKAANAEEFRAALIEAFKHD-------------DKVLIEEFVK-AREIECAVL 229


>gi|218290680|ref|ZP_03494771.1| cyanophycin synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239345|gb|EED06543.1| cyanophycin synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 881

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 14/103 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +  + V  G V      A    + L GP  VVK         +G+   L  +S+ 
Sbjct: 219 KRLLDEAGLAVPPGGVAIDEDQAVLLWRHLDGP-AVVKP----LDARQGQGVSLRLESEA 273

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
            VR     +      R+++       +    G  V  V V DG
Sbjct: 274 EVRAAF--REAQRYARDVI------VEAYVPGENV-RVLVVDG 307


>gi|195155747|ref|XP_002018762.1| GL25777 [Drosophila persimilis]
 gi|194114915|gb|EDW36958.1| GL25777 [Drosophila persimilis]
          Length = 1342

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +  + A++ I++ P    VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTNKAKAFIRSAPYQALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V +++      + EILG
Sbjct: 160 -GVVVAANVDEACQAVDEILG 179


>gi|110597169|ref|ZP_01385458.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Chlorobium
           ferrooxidans DSM 13031]
 gi|110341360|gb|EAT59825.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Chlorobium
           ferrooxidans DSM 13031]
          Length = 397

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 18/96 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +++  + V   +       A      +  P+ V+K    AG R              GVR
Sbjct: 113 MKEAGLSVPAFMPFRFPDEAARHAAEIGFPV-VIKPIDSAGSR--------------GVR 157

Query: 72  VESSLKSVISDIREILG---STLITKQTGPTGSRVN 104
              S + V+    E L    S +   +    G  V+
Sbjct: 158 FVRSAEEVMQAATEALDASRSKIGLVEEYVEGLEVS 193


>gi|328958663|ref|YP_004376049.1| phosphoribosylamine--glycine ligase [Carnobacterium sp. 17-4]
 gi|328674987|gb|AEB31033.1| phosphoribosylamine--glycine ligase [Carnobacterium sp. 17-4]
          Length = 423

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A   +      A + ++    P+ V+K+   A G+             
Sbjct: 107 AKELMKKYAIPTATYEIFEDHDVALAYVEKNGVPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V  +++     + E+L      K     G     V +E+
Sbjct: 153 -GVVVAMTMREATDALSEML-----VKGKYAAGKP--KVVIEE 187


>gi|325965303|ref|YP_004243208.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323471390|gb|ADX75074.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 677

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 59/224 (26%), Gaps = 26/224 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL    +        ++  AA  A+  L GP+ V         + +     L  
Sbjct: 470 ENRAKELLGALGITTPSRRSCTNRTAAHEALLELGGPVAVKLLDAAVLHKTEIGGVHLGV 529

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S   +                                     VE  A    +L + +  
Sbjct: 530 KSTEDMDRALDALEAAGA---------------------REFLVEAMAPSGIDLVVGVRR 568

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA- 183
           D   G +  +    GG   E  A    +      +             L           
Sbjct: 569 DPVFGPIVVLG--LGGTAAEVYADVSIRSAPLSDLAADSMPNELLARELLHGFRSGPLLD 626

Query: 184 RIDGGDLFPNLYKAFCDKDMS-LLEINPLIIMKNGRLRVLDSKI 226
             +   +   L  A    +    +EINPL +   G L  LD+ +
Sbjct: 627 ATELSAVLVKLGDALVANEAIAEIEINPLRLTHEG-LVALDAVV 669


>gi|295695966|ref|YP_003589204.1| carbamoyl-phosphate synthase, large subunit [Bacillus tusciae DSM
           2912]
 gi|295411568|gb|ADG06060.1| carbamoyl-phosphate synthase, large subunit [Bacillus tusciae DSM
           2912]
          Length = 1107

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    +   +G    S+  A  A + L  PL V  S +  G                 
Sbjct: 671 ELLADLGLSRPRGRTAWSLEEARRAAQDLGYPLLVRPSYVLGG---------------RA 715

Query: 70  VRVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
           +++    + +   +RE   +     +       G+ V    V DG D+
Sbjct: 716 MQIVDQPEELEGYLREAFEAGPDRPVWIDRYIQGTEVEVDAVCDGEDV 763



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 53/189 (28%), Gaps = 40/189 (21%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q + L+ +   PV +  +++ V  A      +  P+ V               +      
Sbjct: 131 QFRKLMAEIGEPVPESAIVTEVEEALQFADRIGYPVIV---------------RPAYTLG 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G  + +  + +                 G   S +  + VE      +E+   ++  R
Sbjct: 176 GTGGGLAAGPEELAEVAA-----------LGLEASPIRQILVERSVAGFKEIEYEVM--R 222

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLEL 179
                  +      +D   V       I   ++ P   ++ +D          +   L +
Sbjct: 223 DGRDTCIVVCNMENVDP--VGIHTGDSI---VVAPSQTLSDQDYQLLRSASLRIIRALGI 277

Query: 180 QGQARIDGG 188
           +G   +   
Sbjct: 278 EGGCNVQFA 286


>gi|257422358|ref|ZP_05599348.1| phosphoribosylamine-glycine ligase [Enterococcus faecalis X98]
 gi|257164182|gb|EEU94142.1| phosphoribosylamine-glycine ligase [Enterococcus faecalis X98]
 gi|315156072|gb|EFU00089.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0043]
          Length = 415

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKTAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|257087060|ref|ZP_05581421.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis D6]
 gi|256995090|gb|EEU82392.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis D6]
 gi|315027934|gb|EFT39866.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX2137]
          Length = 415

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKTAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|325981161|ref|YP_004293563.1| cyanophycin synthetase [Nitrosomonas sp. AL212]
 gi|325530680|gb|ADZ25401.1| cyanophycin synthetase [Nitrosomonas sp. AL212]
          Length = 857

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K LL    +PV  G  +S+   A +A + +  P+ +
Sbjct: 209 KTLLHAAGIPVPLGRNVSNAEDAWAAAREVGMPVVI 244


>gi|308809944|ref|XP_003082281.1| P0610E02.33 gene product (ISS) [Ostreococcus tauri]
 gi|116060749|emb|CAL57227.1| P0610E02.33 gene product (ISS) [Ostreococcus tauri]
          Length = 404

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KYN+P A+    +    A+  IK+   P+ VVK+   A G+              
Sbjct: 81  KDLCAKYNIPTAEYAKFTDPVEAKEYIKSKGTPI-VVKTDGLAAGK-------------- 125

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  ++   ++ + ++L + +     G  G   N + VE+  D     + +++     
Sbjct: 126 GVIVAMNMDDALNAVDDMLTNAVF----GSAG---NEIVVEEFLDGEEASFFAVV---GG 175

Query: 129 GMVAFIASTQG 139
           G    +AS Q 
Sbjct: 176 GKAVPLASAQD 186


>gi|323700785|ref|ZP_08112697.1| D-alanine/D-alanine ligase [Desulfovibrio sp. ND132]
 gi|323460717|gb|EGB16582.1| D-alanine/D-alanine ligase [Desulfovibrio desulfuricans ND132]
          Length = 303

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 62/209 (29%), Gaps = 45/209 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K +     +   +  +I +          L  P++V               K     S 
Sbjct: 99  SKEVFEANGINTPEWQLI-TPTQGRETPLELSLPVFV---------------KPDKGGSS 142

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G+ +    +   + + ++                     VE       EL   +L +  
Sbjct: 143 LGMSLVKRAEDFPAALDKVFAM-------------CQSALVETFIP-GVELTCGILGN-- 186

Query: 128 SGMVAFIASTQGGMDI----EEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQ 182
             +   + + + G D      + A D  ++I    +D  +  T  E +      L L G 
Sbjct: 187 EALPLIMITPRVGSDFFDYENKYAADGAEEICPAPVDEGLVRTIQEQMLVAHAALGLTGY 246

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPL 211
           +R D             D +  LLE+N L
Sbjct: 247 SRGDFIAT--------PDGETYLLEVNTL 267


>gi|302534832|ref|ZP_07287174.1| phosphoribosylglycinamide formyltransferase 2 [Streptomyces sp. C]
 gi|302443727|gb|EFL15543.1| phosphoribosylglycinamide formyltransferase 2 [Streptomyces sp. C]
          Length = 411

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 78/276 (28%), Gaps = 70/276 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  ++S      +  + + G   ++K+ +  G  GK            GV 
Sbjct: 142 LDEIGAPSPRHRIVSDPADVAAFAEEVGGFPVILKT-VRGGYDGK------------GVW 188

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
              + +   +  +               G  V     E+  D +REL  +++      + 
Sbjct: 189 FVRTPEDAEAPFK--------------AGVPV---LAEEKVDYVRELAANIVRSPHGQAV 231

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               + S Q     + V    P        + L G        +   L++ G   ++   
Sbjct: 232 AYPVVESIQVDGVCDTVIAPAPDLS-----EALAGEAQALALRIAKELDVTGHLAVE--- 283

Query: 190 LFPNLYKAFCDKDMSLLEINPLII--------MKNGRL---RVLDSKISFDDNALYRHLD 238
                   F   D  +L +N L +         ++G +        +   D         
Sbjct: 284 -------LFETTDGRIL-VNELAMRPHNSGHWTQDGAVTSQFANHVRAVLD--------- 326

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL-DGNIGCMV 273
              L D        + A      Y  +  G + CM 
Sbjct: 327 -LPLGDPRPRARWTVMANVLGGDYPDMYAGYLHCMA 361


>gi|299133571|ref|ZP_07026765.1| CoA-binding domain protein [Afipia sp. 1NLS2]
 gi|298591407|gb|EFI51608.1| CoA-binding domain protein [Afipia sp. 1NLS2]
          Length = 710

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 78/266 (29%), Gaps = 18/266 (6%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y + V    +  S   A      +  P+ +         + +     +    
Sbjct: 27  EGKLVCDAYGIAVPGEGLAKSADEATKLAGGMGYPVVMKIVSPDILHKTEAGGVVVGVKD 86

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
               +                   L   +     +++  + V+       E+ +  + D 
Sbjct: 87  DAAAKAAYD-------------QILANAKKYKADAKIEGIQVQQMLTGGTEVIIGSITDD 133

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
           + G    +A   GG+ +E +     +       D L  +       +   +       R 
Sbjct: 134 SFGK--LVAFGLGGVLVEVLKDITFRMAPATKEDALSMLDGIQAKEMLHGVRGGDAVNRD 191

Query: 186 DGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
              ++   + +   D  ++  L++NP+   K       D +I  D N   +     +   
Sbjct: 192 ALANIIVGVSQLVTDFPEIVELDLNPVFATK-KDAIAADVRIVVDFNYKPKPAPRPDSEI 250

Query: 245 VSEEDSREIEAKQHNLSYIALDGNIG 270
           V+  +   +      +   A DG IG
Sbjct: 251 VTAMNRIMMPKSVAVIGASAEDGKIG 276


>gi|254459696|ref|ZP_05073112.1| CoA-binding [Rhodobacterales bacterium HTCC2083]
 gi|206676285|gb|EDZ40772.1| CoA-binding [Rhodobacteraceae bacterium HTCC2083]
          Length = 652

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 80/228 (35%), Gaps = 37/228 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AKA L ++ +P+ K  V +      +   TL  P +V+K   H+     G  K  
Sbjct: 448 LAENDAKARLARFGLPIPKSDVGTHEDDIVAKAITLR-PPWVLKGLGHSHKSEAGAVKIS 506

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             D         ++KS    I E++  ++I                        EL L++
Sbjct: 507 IRDEPSLRTALKNIKSDAYLIEEMVQKSVI------------------------ELLLAV 542

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI---GVTSEDVASLCDML-E 178
            +D   G V  + +  GG   E +  D    I  L +D  +    ++    A L D    
Sbjct: 543 TLDPVHGYVLTLGA--GGTQTELLQ-DTASLI--LPVDEAMVDSALSKLRCAPLFDGYRG 597

Query: 179 LQGQARIDGGDLFPNL--YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
            Q   R         +  Y       +  +EINPLI     R   +D+
Sbjct: 598 AQPIDRKSLWQAIVAVQNYVIAHHGQVQEIEINPLICTHT-RAIAVDA 644


>gi|119470262|ref|ZP_01613021.1| phosphoribosylaminoimidazole carboxylase [Alteromonadales bacterium
           TW-7]
 gi|119446434|gb|EAW27709.1| phosphoribosylaminoimidazole carboxylase [Alteromonadales bacterium
           TW-7]
          Length = 382

 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 57/191 (29%), Gaps = 34/191 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KALL K  V  A   +I+     E A K L  PL +   Q    G+G+ R K        
Sbjct: 97  KALLNKTGVECAPYQLITEKVHLELAAKNLGKPLVIKTCQAGYDGKGQWRLK-------- 148

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 S   +     E+        Q  P     + +  E      RE  +S++  R  
Sbjct: 149 ------SDDQIDEIWSEMADFIASGTQDAP-----HTIIAEKMIPFDRE--VSIIGARDK 195

Query: 129 GMVAFIA-----STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
                I          G+    VA    Q +     D            + + L   G  
Sbjct: 196 HGNVAIYPLTENEHTNGVLTLSVAGKNNQNVEAQANDAFT--------KIANELNYVGVL 247

Query: 184 RIDGGDLFPNL 194
            I+  D+   L
Sbjct: 248 AIEFFDVMGTL 258


>gi|319775179|ref|YP_004137667.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Haemophilus influenzae F3047]
 gi|317449770|emb|CBY85977.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Haemophilus influenzae F3047]
          Length = 429

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|262195329|ref|YP_003266538.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Haliangium ochraceum DSM 14365]
 gi|262078676|gb|ACY14645.1| Carbamoyl-phosphate synthase L chain ATP- binding protein
           [Haliangium ochraceum DSM 14365]
          Length = 1912

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 11/106 (10%)

Query: 8   AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +  +  VPVA      ++++  A +  + +  P  +VK+    GGRG  +     A 
Sbjct: 138 SKQIAEEAQVPVAPWSNGPVATLEDARAHAERIGYP-LMVKATAGGGGRGIRKVVSAEAL 196

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTG-SRVNCVYVED 110
            +         +S  ++     G   +  +   TG   V    V D
Sbjct: 197 DEA-------FESARTEALRGFGDDTVFLERMVTGARHVEVQLVAD 235


>gi|257090092|ref|ZP_05584453.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis CH188]
 gi|312903528|ref|ZP_07762708.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0635]
 gi|256998904|gb|EEU85424.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis CH188]
 gi|310633404|gb|EFQ16687.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0635]
 gi|315162405|gb|EFU06422.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0645]
 gi|315577917|gb|EFU90108.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0630]
          Length = 415

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKTAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|256762762|ref|ZP_05503342.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T3]
 gi|256684013|gb|EEU23708.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T3]
          Length = 415

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKTAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|58038694|ref|YP_190658.1| biotin carboxylase [Gluconobacter oxydans 621H]
 gi|58001108|gb|AAW60002.1| Biotin carboxylase [Gluconobacter oxydans 621H]
          Length = 451

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 68/218 (31%), Gaps = 39/218 (17%)

Query: 8   AKALLRKYNVPVAKG---VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R+  VP   G    + + +  A++    +  PL V                    
Sbjct: 121 AKQQMRRSGVPCLPGTEDALPTDLSEAQAICDAIGYPLIVK------------AAGGGGG 168

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V   + L+  I   RE  G                 VY E      R + + +L 
Sbjct: 169 RGMRVVMAAADLRDAIETAREEAGRAFGNP----------SVYAERFLQHPRHIEIQVLA 218

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           DR    V   A       I+   +   ++   + IDP  I    E  A  C ++   G  
Sbjct: 219 DRQGNAVWLGA---RDCSIQRRHQKLIEEAPAIGIDPQAIAELGERCAKACTLMGYTG-- 273

Query: 184 RIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNG 217
                  F  LY+    +F + +  L   +P+  M  G
Sbjct: 274 ----AGTFEFLYEDGAFSFIEMNTRLQVEHPVTEMTTG 307


>gi|84502077|ref|ZP_01000235.1| CoA-binding [Oceanicola batsensis HTCC2597]
 gi|84390072|gb|EAQ02706.1| CoA-binding [Oceanicola batsensis HTCC2597]
          Length = 727

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 21/221 (9%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    +PV + +  +    +E+A+  L     V+K             + +     GGV 
Sbjct: 518 LAAAGLPVTRSLRATDPTLSEAAVADLG--RAVMKID---------TPRAVHKSDIGGVA 566

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  +        + +  +      T P       V+V +  D   E Y+    D T G V
Sbjct: 567 LNVTQDIAAETYQRLCAALTPPVGTEPG----EGVFVAEQLDGGTEFYVGAKRDATFGTV 622

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDL 190
                  GG  +E + +           D L  +         D         R     L
Sbjct: 623 VV--CGMGGRMLELMERTALLVCPFTEADALAAIDRSGAGRFLDGFRGDPVSDREALARL 680

Query: 191 FPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVL-DSKISF 228
              + +        L  L++NP+I+  +     + D+++  
Sbjct: 681 IVTVGRIASGFGARLETLDLNPVIVTHDRPGGCIADARLIL 721


>gi|84392311|ref|ZP_00991738.1| hypothetical protein V12B01_14145 [Vibrio splendidus 12B01]
 gi|84376431|gb|EAP93311.1| hypothetical protein V12B01_14145 [Vibrio splendidus 12B01]
          Length = 893

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q     + +N+ V    + S    A    +T+  P+ V         + +       +D
Sbjct: 496 HQNSQFFKHFNLDVLPTWIASDPSEAVHIAETIGYPVAV---------KLRSPDIAHKSD 546

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +    +   V +  + IL  + ++  T      ++ + ++  A +   +EL + + 
Sbjct: 547 VQGVMLNLRNSSEVANAAQAILDRSQLSFPTAH----IHGLLIQGMAKLAGGQELRVKVT 602

Query: 124 VDRTSGMVAFIASTQGGMDIEE 145
            D T G +  +   QGG + +E
Sbjct: 603 TDETFGPIILLG--QGGSEWDE 622


>gi|284031631|ref|YP_003381562.1| cyanophycin synthetase [Kribbella flavida DSM 17836]
 gi|283810924|gb|ADB32763.1| cyanophycin synthetase [Kribbella flavida DSM 17836]
          Length = 953

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    +PV +   + +V  A +    +  P+ V K      GRG     + P D +  
Sbjct: 256 RLLASAGLPVPRSDSVRTVEDAVTVANKIGYPV-VCKPLDGNHGRGVCLNLQGPDDVRAA 314


>gi|168334931|ref|ZP_02693050.1| biotin carboxylase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 451

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+ L+ +  VPV  G   V+SS   A    K +  P+ ++K+    GGRG
Sbjct: 119 ARKLMIEAGVPVVPGSKGVVSSTQQALVVAKEIGYPV-MLKASAGGGGRG 167


>gi|56388736|gb|AAH87644.1| Gart protein [Rattus norvegicus]
          Length = 433

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ VP A+    +S   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGVPTAQWRAFTSPEDACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  S       ++EI+
Sbjct: 157 -GVIVAKSKAEACEAVQEIM 175


>gi|295787|emb|CAA29611.1| GARS-AIRS-GART polypeptide [Drosophila pseudoobscura]
          Length = 1364

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +  + A++ I++ P    VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTNKAKAFIRSAPYQALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V +++      + EILG
Sbjct: 160 -GVVVAANVDEACQAVDEILG 179


>gi|329122901|ref|ZP_08251472.1| phosphoribosylamine-glycine ligase [Haemophilus aegyptius ATCC
           11116]
 gi|327471832|gb|EGF17272.1| phosphoribosylamine-glycine ligase [Haemophilus aegyptius ATCC
           11116]
          Length = 429

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|320546979|ref|ZP_08041280.1| carbamoyl-phosphate synthase, large subunit [Streptococcus equinus
           ATCC 9812]
 gi|320448381|gb|EFW89123.1| carbamoyl-phosphate synthase, large subunit [Streptococcus equinus
           ATCC 9812]
          Length = 1059

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  N+P   G   ++   A  A   +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKALNIPQPPGQTATNEEEAVEAAHKIGFPVLVRPSYVLGG 714



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 15/89 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L+   N P+ +  ++++V  A +   ++  P+ V  +    G              
Sbjct: 131 QFKQLMEDLNQPIPESEIVNTVDEAVAFADSIGYPVIVRPAFTLGG-------------- 176

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQ 95
             G  +  + + +       L  + +T+ 
Sbjct: 177 -TGGGMCDNEEELREIAENGLKLSPVTQC 204


>gi|315167445|gb|EFU11462.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX1341]
          Length = 415

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKTAAKRALVAMMEDQQFGASGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|295695482|ref|YP_003588720.1| phosphoribosylamine/glycine ligase [Bacillus tusciae DSM 2912]
 gi|295411084|gb|ADG05576.1| phosphoribosylamine/glycine ligase [Bacillus tusciae DSM 2912]
          Length = 442

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  +P A+     S   A   +++   P+ VVK+   A G+             
Sbjct: 106 AKALMTRVGIPTARYASFDSYEEALKYLRSHGAPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L+   + +R +    ++    G +G RV
Sbjct: 152 -GVVVARTLQEAEAALRSM----MVDGVFGESGRRV 182


>gi|149244854|ref|XP_001526970.1| urea amidolyase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146449364|gb|EDK43620.1| urea amidolyase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 1859

 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +     VP V    ++     A+     L  P+ V KS    GG G  +      
Sbjct: 774 HSAREIAEAAGVPLVPGSGLVKDSKEAKEIAAKLEYPVMV-KSTAGGGGIGLQK------ 826

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S              + V++E   +  R + + +L 
Sbjct: 827 -----VDSEKDIERVFQTVQHQGLSYFGD----------SGVFLERFVENARHVEIQMLG 871

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T + +    + L      +
Sbjct: 872 DGYGNAIAV------GERDCSLQRRNQKIIEETPAPDLPEATRQKMRKAAESLG--ASMK 923

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 924 YKCAGTVEYIYDP-KRDEFYFLEVNA 948


>gi|300690891|ref|YP_003751886.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Ralstonia
           solanacearum PSI07]
 gi|299077951|emb|CBJ50591.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Ralstonia
           solanacearum PSI07]
          Length = 422

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P AK    S+   A + +     P+ V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTAKYQTFSNAAEAHAYVDREGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+         +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMSLEEAHGA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +A++Q 
Sbjct: 203 D--VVAMATSQD 212


>gi|126567323|emb|CAL47310.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 11/90 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I  + G    AN+ +  GG    +     + +        DS  
Sbjct: 1   WTMVAGGGASVVYADTIADFAGIDDLANYGEYSGGPTTGETKFYAETLLDLMTREKDSKD 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKE 348
           +  ++ I G I     + K   GI+ A + 
Sbjct: 61  RNKIMIIGGAIANFTDVAKTFTGIIQAFEN 90


>gi|123968578|ref|YP_001009436.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. AS9601]
 gi|123198688|gb|ABM70329.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. AS9601]
          Length = 1098

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K NV V    + S++  A    K +     +++     GG G G           
Sbjct: 133 KESMEKINVNVCPSGIASNLDEAVEVSKKISSYPLIIRPAFTLGGVGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +L+  +   +           +G   S  N + +E      +E  L ++ D  +
Sbjct: 182 ---IAFNLEEFVVLCK-----------SGLEESPSNQILIEKSLIGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|114761168|ref|ZP_01441083.1| acyl-CoA synthetase, putative [Pelagibaca bermudensis HTCC2601]
 gi|114545416|gb|EAU48418.1| acyl-CoA synthetase, putative [Roseovarius sp. HTCC2601]
          Length = 681

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 66/230 (28%), Gaps = 33/230 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AKALL    V V      +    A      +  P+ +           KG       
Sbjct: 481 EAEAKALLSGVGVRVPGSGRAADAATAAETAARIGFPVVL-----------KGEGIAHKT 529

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           ++   V   +S + V                    G       VE+     + EL L + 
Sbjct: 530 EAGAVVLNLASAQEVSDAAA---------------GMPAESFLVEEMITGTVAELILGVT 574

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQ 182
            D   G V  +    GG+  E +       I     D    + S      L       G 
Sbjct: 575 RDPAHGFVLTLG--LGGILTELIRDTASVLIPASRDDIAAALQSLRTAPLLTGYRGRPGA 632

Query: 183 ARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFDD 230
                 D    L     D   +L  +EINPLI      +   D+ I  ++
Sbjct: 633 DMDAIIDTAMALQTLVQDNASALHEIEINPLICRATDAV-AADALIRMEE 681


>gi|83721099|ref|YP_441709.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           thailandensis E264]
 gi|167580523|ref|ZP_02373397.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           thailandensis TXDOH]
 gi|167618632|ref|ZP_02387263.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           thailandensis Bt4]
 gi|257137878|ref|ZP_05586140.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           thailandensis E264]
 gi|83654924|gb|ABC38987.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           thailandensis E264]
          Length = 455

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 116/342 (33%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +           +++  P+ +  +                 
Sbjct: 119 AKQTMIRTGVPCVPGSDGALPDDPKEIVKIARSVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SHKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     KI+  +   
Sbjct: 263 ACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGVDIVQEQIKIAAGEKLS 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G I       G G+ + +      +  
Sbjct: 323 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRITSWHTPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++     +I  S+  V+GIL NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAINRMRIALSEMVVEGILTNI 418


>gi|315926045|ref|ZP_07922246.1| carbamoyl-phosphate synthase, large subunit [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315620659|gb|EFV00639.1| carbamoyl-phosphate synthase, large subunit [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 1081

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 18/107 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L+    +P  KG  +     A +  + L  P+ +  S +  G                 
Sbjct: 688 ELVESCGIPRPKGDTVFKTEEAVAVARRLGYPVLLRPSYVLGG---------------QN 732

Query: 70  VRVESSLKSVISDIREILGSTL---ITKQTGPTGSRVNCVYVEDGAD 113
           + +  S   V   +  I    +   +       G  V    + DG D
Sbjct: 733 MIIAHSDADVEEYMGIITAHEITNPVLVDKYLMGKEVEVDAICDGTD 779


>gi|239941768|ref|ZP_04693705.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239988228|ref|ZP_04708892.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces roseosporus NRRL 11379]
          Length = 379

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 79/276 (28%), Gaps = 70/276 (25%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  ++S    A +  + + G   ++K+ +  G  GK            GV 
Sbjct: 110 LAEIGAPCPRNRIVSDPADAAAFAEEVGGFPVILKT-VRGGYDGK------------GVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+  D +REL  +++      + 
Sbjct: 157 VVRSEADAADPFR--------------AGVPV---LAEEKVDFVRELAANIVRSPHGQAV 199

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
               + S Q     + V    P+         L G   +    +   L++ G   ++   
Sbjct: 200 AYPVVESIQVDGVCDTVIAPAPELDET-----LAGEAQQLALRIAAELDVVGHLAVE--- 251

Query: 190 LFPNLYKAFCDKDMSLLEINPLII--------MKNGRL---RVLDSKISFDDNALYRHLD 238
                   F  +D  +L +N L +         ++G +        +   D         
Sbjct: 252 -------LFETRDGRIL-VNELAMRPHNSGHWTQDGAITSQFANHVRAVLD--------- 294

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIAL-DGNIGCMV 273
              L D        +        Y  +  G + CM 
Sbjct: 295 -LPLGDPRPRAPWTVMCNVLGGDYPDMYQGYLHCMA 329


>gi|240102817|ref|YP_002959126.1| GMP synthase subunit B [Thermococcus gammatolerans EJ3]
 gi|239910371|gb|ACS33262.1| GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit (C
           terminal domain) (guaA_C) [Thermococcus gammatolerans
           EJ3]
          Length = 311

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A K +   L+ V        +G+  F       + G+ +         D  
Sbjct: 34  VDSSTAAVLAHKAIGDRLHAVFVNTGFMRKGEPEFVVKTFRDEFGLNLHY------VDAS 87

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           E     L          ++   V++E   +I +E+    L+  T     +I S  G +  
Sbjct: 88  ERFFKALKGVTDPEEKRKIIGRVFIEVFEEIAKEINADFLIQGTIA-PDWIESK-GKIKS 145

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+++   LI+PL  +  ++V  L   L L 
Sbjct: 146 HHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELGLP 182


>gi|295835933|ref|ZP_06822866.1| lysine biosynthesis enzyme LysX [Streptomyces sp. SPB74]
 gi|197698399|gb|EDY45332.1| lysine biosynthesis enzyme LysX [Streptomyces sp. SPB74]
          Length = 282

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            VP  + VV  +  AA  A++ +  P  V+K  + + GR
Sbjct: 94  GVPTPRTVVALTPDAALRAVEEIGYP-AVLKPLVGSWGR 131


>gi|197245699|gb|AAI68661.1| Gart protein [Rattus norvegicus]
          Length = 433

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ VP A+    +S   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGVPTAQWRAFTSPEDACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  S       ++EI+
Sbjct: 157 -GVIVAKSKAEACEAVQEIM 175


>gi|187250929|ref|YP_001875411.1| phosphoribosylamine/glycine ligase [Elusimicrobium minutum Pei191]
 gi|186971089|gb|ACC98074.1| Phosphoribosylamine/glycine ligase [Elusimicrobium minutum Pei191]
          Length = 415

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 35/163 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + KY++P AK  V  S   A+  +   P P  VVK+   A G+             
Sbjct: 105 SKEFMVKYSIPTAKYTVCKSSEEAKKLVAEHPLP-LVVKADGLAAGK------------- 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA---------DILREL 118
            GVR+  + +  +  + + +   +     G  G    CV +E+            +  E 
Sbjct: 151 -GVRICITREEAVEAVVDFMDKKIF----GNAGC---CVVIEEYLLGPELSVMGFVDGEH 202

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYP-QKIFKLLID 160
           YL + + R       +     G +   +    P  +I K  ID
Sbjct: 203 YLLMPISRDYKR---LGEDNRGPNTGGMGAYCPVTEIKKEDID 242


>gi|218779902|ref|YP_002431220.1| phosphoribosylamine/glycine ligase [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761286|gb|ACL03752.1| phosphoribosylamine/glycine ligase [Desulfatibacillum alkenivorans
           AK-01]
          Length = 589

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 17/107 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+L+ KY +P A G   + +  A++ I+ + G + VVK+   A G+             
Sbjct: 106 AKSLMTKYGIPTAIGKTFTDIEKAKAYIEEVGGKV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            GV V ++ K  +  +   L               +  + V + A  
Sbjct: 152 -GVMVCTNKKQALEAVN--LVMEEKAFGDAGKKMVIEELLVGEEASF 195


>gi|198476551|ref|XP_001357392.2| ade3 [Drosophila pseudoobscura pseudoobscura]
 gi|109940129|sp|P16340|PUR2_DROPS RecName: Full=Trifunctional purine biosynthetic protein
           adenosine-3; Includes: RecName:
           Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=Glycinamide ribonucleotide synthetase; Short=GARS;
           AltName: Full=Phosphoribosylglycinamide synthetase;
           Includes: RecName:
           Full=Phosphoribosylformylglycinamidine cyclo-ligase;
           AltName: Full=AIR synthase; Short=AIRS; AltName:
           Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
           RecName: Full=Phosphoribosylglycinamide
           formyltransferase; AltName:
           Full=5'-phosphoribosylglycinamide transformylase;
           AltName: Full=GAR transformylase; Short=GART
 gi|198137748|gb|EAL34461.2| ade3 [Drosophila pseudoobscura pseudoobscura]
          Length = 1364

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +  + A++ I++ P    VVK+   A G+             
Sbjct: 113 AKDFMLRHGIPTARYESFTDTNKAKAFIRSAPYQALVVKAAGLAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV V +++      + EILG
Sbjct: 160 -GVVVAANVDEACQAVDEILG 179


>gi|224367793|ref|YP_002601956.1| SucD1 [Desulfobacterium autotrophicum HRM2]
 gi|223690509|gb|ACN13792.1| SucD1 [Desulfobacterium autotrophicum HRM2]
          Length = 716

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E     LL+ Y + V    +  +   A +    +  P+ +  +      +   +   +  
Sbjct: 501 ELDGIELLKCYGMSVLPTKLAKTAKEAIALASEMKYPVVMKIASAQILHKSDAKGVMVGL 560

Query: 65  DSKGGVRVESSLKSVISDI---REILGSTLITKQTGPTGSRV 103
           +S G V+         ++    + I+   L+ K   P G  V
Sbjct: 561 NSDGEVKKAFDQIIANANAYDPKAIIDGVLVVKMATP-GEEV 601


>gi|86159932|ref|YP_466717.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776443|gb|ABC83280.1| carbamoyl-phosphate synthase large subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 1067

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 54/182 (29%), Gaps = 28/182 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  +  A+  + +++  A +A + L  PL V  +    G                
Sbjct: 133 KETMTRLGIETARSEIATTLEQAMAAGQRLGFPLVVRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +++ +       L ++            V+ V VE+      EL L ++ D   
Sbjct: 178 GGGFAYNVEELEEIAARGLLAS-----------PVSQVLVEESVLGWEELELEVVRDAKG 226

Query: 129 GMV-AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +          M +          +  +  +    +       + D +E+ G   +  
Sbjct: 227 RKITVCFIENVDAMGVHTGDSYCTAPMLTIPPELQARLQD-QAYRIVDAIEVIGGTNVQF 285

Query: 188 GD 189
             
Sbjct: 286 AH 287


>gi|77407252|ref|ZP_00784209.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae H36B]
 gi|77174139|gb|EAO77051.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae H36B]
          Length = 353

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 86  LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 130


>gi|302557964|ref|ZP_07310306.1| GNAT family acetyltransferase [Streptomyces griseoflavus Tu4000]
 gi|302475582|gb|EFL38675.1| GNAT family acetyltransferase [Streptomyces griseoflavus Tu4000]
          Length = 252

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 8/85 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +Y + V + +   +  AA  A +TL  P+ +  +  H   R       L    +  
Sbjct: 35  DLLGRYGIQVHRALPAPTPDAAVEAARTLGHPVALKATAPHLRHRADLGGVRLDLADEEQ 94

Query: 70  VRVES--------SLKSVISDIREI 86
           +R           S   +   ++ +
Sbjct: 95  LRRAYAELTELFGSPAELRPVVQRM 119


>gi|172061255|ref|YP_001808907.1| phosphoribosylamine--glycine ligase [Burkholderia ambifaria MC40-6]
 gi|171993772|gb|ACB64691.1| phosphoribosylamine--glycine ligase [Burkholderia ambifaria MC40-6]
          Length = 426

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      S  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFSDAAAAHAYIDTKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|90413393|ref|ZP_01221386.1| phosphoribosylamine--glycine ligase [Photobacterium profundum 3TCK]
 gi|90325635|gb|EAS42104.1| phosphoribosylamine--glycine ligase [Photobacterium profundum 3TCK]
          Length = 429

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTAEYQNFTEIDPALAYLQEKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G RV    +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAENAVRDMLA----GNAFGEAGHRV---VIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|50289419|ref|XP_447141.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526450|emb|CAG60074.1| unnamed protein product [Candida glabrata]
          Length = 791

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++N+P A+     S   A+  ++ +   + V+K+   A G+             
Sbjct: 112 SKDFMQRHNIPTARHKTFESYEEAKRHLEEVNYRV-VLKADGVAAGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV +  + +  +      L   ++ KQ G  G   N V +E+  +
Sbjct: 158 -GVLIPENKEEALKA----LDVIMVEKQFGDAG---NTVVIEEFLE 195


>gi|186682228|ref|YP_001865424.1| RimK domain-containing protein ATP-grasp [Nostoc punctiforme PCC
           73102]
 gi|186464680|gb|ACC80481.1| RimK domain protein ATP-grasp [Nostoc punctiforme PCC 73102]
          Length = 636

 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           KA L+    PV +G ++ S   A +A + +  P+ V     H G
Sbjct: 221 KAFLKTLGFPVPEGDIVFSEKEALAAAREIGYPVAVKPVVGHKG 264


>gi|332981995|ref|YP_004463436.1| carbamoyl-phosphate synthase large subunit [Mahella australiensis
           50-1 BON]
 gi|332699673|gb|AEE96614.1| carbamoyl-phosphate synthase large subunit [Mahella australiensis
           50-1 BON]
          Length = 1080

 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL + N+P   G  + +V  A  A   L  P+ V  S +  G                G
Sbjct: 675 KLLNELNIPRPAGATVFTVQEAMDAANKLGYPVLVRPSYVLGG---------------QG 719

Query: 70  VRVESSLKSVISD---IREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           + +  S K +      +  +     I       G  +    + DG DI
Sbjct: 720 MEIAHSDKDIEEYIGIVNRVKQEHPILVDKYLMGKELEVDAICDGQDI 767


>gi|238798680|ref|ZP_04642154.1| Phosphoribosylamine--glycine ligase [Yersinia mollaretii ATCC
           43969]
 gi|238717498|gb|EEQ09340.1| Phosphoribosylamine--glycine ligase [Yersinia mollaretii ATCC
           43969]
          Length = 428

 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVTDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|323337735|gb|EGA78979.1| Ade5,7p [Saccharomyces cerevisiae Vin13]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|319764846|ref|YP_004128783.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
 gi|317119407|gb|ADV01896.1| CoA-binding domain protein [Alicycliphilus denitrificans BC]
          Length = 695

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 32/119 (26%), Gaps = 15/119 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +  LL ++ VP     +  +   A +A   +  P  V         + +     L
Sbjct: 480 LNEVDSLGLLARHGVPTVPMHLCRTADEARAAFDAVGAPAVVKACSAEVPHKSEHGLVAL 539

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                       + +                 +    G + + V V       RE  + 
Sbjct: 540 N---------VQTREQAAELFER------FWARMDAMGVQRDGVIVAATHKARREFMVG 583


>gi|237723437|ref|ZP_04553918.1| pyruvate carboxylase subunit A [Bacteroides sp. D4]
 gi|229438193|gb|EEO48270.1| pyruvate carboxylase subunit A [Bacteroides dorei 5_1_36/D4]
          Length = 419

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 36/197 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 43  GVPVVPGTEQPLQSAEEAVRICNEIGYPV-MLKASMGGGGK--------------GMRLI 87

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 88  HSEDEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNHGNVI-- 138

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 139 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRQEMGEKAVAAARAVNYSGAGTIE 191

Query: 193 NLYKAFCDKDMSLLEIN 209
            L     ++D   LE+N
Sbjct: 192 FLVD--KNRDFYFLEMN 206


>gi|206889968|ref|YP_002249062.1| phosphoribosylamine--glycine ligase [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206741906|gb|ACI20963.1| phosphoribosylamine--glycine ligase [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 421

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++ +P ++  V +S   AE  I  L G   V+K+   A G+             
Sbjct: 106 AKDFMKRHKIPTSEYKVFTSYTHAEEYI-RLKGTPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S    +      L   +  K  G  G   + V +E+        YL +  D  
Sbjct: 152 -GVFVCQSYDEAVDA----LKLIMKEKAFGSAG---DRVVIEECLQGKEVSYL-VFTDGK 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TIIPMV 208


>gi|149059851|gb|EDM10734.1| phosphoribosylglycinamide formyltransferase, isoform CRA_b [Rattus
           norvegicus]
          Length = 582

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ VP A+    +S   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGVPTAQWRAFTSPEDACSFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  S       ++EI+
Sbjct: 157 -GVIVAKSKAEACEAVQEIM 175


>gi|145641928|ref|ZP_01797502.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae R3021]
 gi|145273407|gb|EDK13279.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae
           22.4-21]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|51013423|gb|AAT93005.1| YGL234W [Saccharomyces cerevisiae]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|323348737|gb|EGA82978.1| Ade5,7p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|294628330|ref|ZP_06706890.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. e14]
 gi|292831663|gb|EFF90012.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. e14]
          Length = 1102

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAEAKTIADEIGYPVLVRPSYVL-GGRG 727


>gi|259146280|emb|CAY79537.1| Ade5,7p [Saccharomyces cerevisiae EC1118]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|254519729|ref|ZP_05131785.1| phosphoribosylamine-glycine ligase [Clostridium sp. 7_2_43FAA]
 gi|226913478|gb|EEH98679.1| phosphoribosylamine-glycine ligase [Clostridium sp. 7_2_43FAA]
          Length = 415

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+  V   V+ A + ++  P P  VVK+   A G+             
Sbjct: 106 SKDFMKKYGVKTAEYEVFYDVNKALNYLEKCPYPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV + +  +  I+ ++    S ++       G     + +E+  + +    LS+ 
Sbjct: 152 -GVAICNDKEEAIAAVK----SFMVDDIFNGAGQ---KIIIEEFLEGVEASILSIT 199


>gi|188995012|ref|YP_001929264.1| phosphoribosylamine--glycine ligase [Porphyromonas gingivalis ATCC
           33277]
 gi|188594692|dbj|BAG33667.1| phosphoribosylamine-glycine ligase [Porphyromonas gingivalis ATCC
           33277]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHA--AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K+ ++++ +P A      +     A  A        YV+K+   A G+           
Sbjct: 111 SKSFMKRHGIPTAAYQ-TFTADQTDAGKAFIDTMQAPYVLKADGLAAGK----------- 158

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  + +    ++ E+LG           G+    V +E+  D
Sbjct: 159 ---GVIIAPTAEEAKRELAEMLGGKF--------GAASRHVVIEEFLD 195


>gi|167912595|ref|ZP_02499686.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 112]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 116/342 (33%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +           +T+  P+ +  +                 
Sbjct: 91  AKQTMIRTGVPCVPGSDGALPEDPKEIVKIARTVGYPVIIKAA------------GGGGG 138

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 139 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 188

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 189 D----------SHKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 234

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     KI+  +   
Sbjct: 235 ACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGVDIVQEQIKIAAGEKLS 294

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G I       G G+ + +      +  
Sbjct: 295 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRITSWHTPGGPGIRVDSHAYNGYF-- 348

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++     +I  S+  V+GIL NI
Sbjct: 349 VPPNYDSMIGKLIAYGATREQAINRMRIALSEMVVEGILTNI 390


>gi|85374723|ref|YP_458785.1| phosphoribosylglycinamide formyltransferase 2 [Erythrobacter
           litoralis HTCC2594]
 gi|123409570|sp|Q2N8K3|PURT_ERYLH RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|84787806|gb|ABC63988.1| glycinamide ribonucleotide transformylase [Erythrobacter litoralis
           HTCC2594]
          Length = 390

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 31/137 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  ++     ++    +A +    P  V+K  + + G+G+             VR    
Sbjct: 118 GITTSRYRYAKNLEEVRAAAEFTGYPC-VIKPVMSSSGKGQST-----------VRSADK 165

Query: 76  LKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF- 133
           L+         + G                 V VE   D   E  ++LL  R    + F 
Sbjct: 166 LEEAWDYAVANMRGDR-------------KRVIVEQFIDFDYE--ITLLTVRHKDGITFC 210

Query: 134 --IASTQGGMDIEEVAK 148
             I   Q   D  E  +
Sbjct: 211 PPIGHRQERGDYRESWQ 227


>gi|15804596|ref|NP_290637.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7
           EDL933]
 gi|15834182|ref|NP_312955.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168752029|ref|ZP_02777051.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758598|ref|ZP_02783605.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764586|ref|ZP_02789593.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771478|ref|ZP_02796485.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777381|ref|ZP_02802388.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168780391|ref|ZP_02805398.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168790366|ref|ZP_02815373.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC869]
 gi|168798360|ref|ZP_02823367.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC508]
 gi|195939631|ref|ZP_03085013.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208806688|ref|ZP_03249025.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813417|ref|ZP_03254746.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821233|ref|ZP_03261553.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396846|ref|YP_002273522.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217325861|ref|ZP_03441945.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254796003|ref|YP_003080840.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227283|ref|ZP_05941564.1| phosphoribosylamine-glycine ligase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257030|ref|ZP_05949563.1| phosphoribosylamine-glycine ligase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285420|ref|YP_003502238.1| Phosphoribosylamine--glycine ligase [Escherichia coli O55:H7 str.
           CB9615]
 gi|20139445|sp|Q8X612|PUR2_ECO57 RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|12518937|gb|AAG59202.1|AE005632_3 phosphoribosylglycinamide synthetase = GAR synthetase [Escherichia
           coli O157:H7 str. EDL933]
 gi|13364404|dbj|BAB38351.1| phosphoribosylglycinamide synthetase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187767359|gb|EDU31203.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014033|gb|EDU52155.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001791|gb|EDU70777.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354601|gb|EDU73020.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189359748|gb|EDU78167.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365461|gb|EDU83877.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370161|gb|EDU88577.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC869]
 gi|189379173|gb|EDU97589.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC508]
 gi|208726489|gb|EDZ76090.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734694|gb|EDZ83381.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741356|gb|EDZ89038.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158246|gb|ACI35679.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209751628|gb|ACI74121.1| phosphoribosylglycinamide synthetase [Escherichia coli]
 gi|209751630|gb|ACI74122.1| phosphoribosylglycinamide synthetase [Escherichia coli]
 gi|209751632|gb|ACI74123.1| phosphoribosylglycinamide synthetase [Escherichia coli]
 gi|209751634|gb|ACI74124.1| phosphoribosylglycinamide synthetase [Escherichia coli]
 gi|209751636|gb|ACI74125.1| phosphoribosylglycinamide synthetase [Escherichia coli]
 gi|217322082|gb|EEC30506.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254595403|gb|ACT74764.1| phosphoribosylamine-glycine ligase [Escherichia coli O157:H7 str.
           TW14359]
 gi|290765293|gb|ADD59254.1| Phosphoribosylamine--glycine ligase [Escherichia coli O55:H7 str.
           CB9615]
 gi|320190897|gb|EFW65547.1| Phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320639096|gb|EFX08736.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           G5101]
 gi|320644490|gb|EFX13553.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H- str.
           493-89]
 gi|320649809|gb|EFX18330.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H- str.
           H 2687]
 gi|320655142|gb|EFX23098.1| phosphoribosylamine--glycine ligase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660786|gb|EFX28240.1| phosphoribosylamine--glycine ligase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320665904|gb|EFX32935.1| phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326347143|gb|EGD70873.1| Phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           1125]
 gi|326347606|gb|EGD71328.1| Phosphoribosylamine--glycine ligase [Escherichia coli O157:H7 str.
           1044]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|6321203|ref|NP_011280.1| Ade5,7p [Saccharomyces cerevisiae S288c]
 gi|131619|sp|P07244|PUR2_YEAST RecName: Full=Bifunctional purine biosynthetic protein ADE5,7;
           Includes: RecName: Full=Phosphoribosylamine--glycine
           ligase; AltName: Full=Glycinamide ribonucleotide
           synthetase; Short=GARS; AltName:
           Full=Phosphoribosylglycinamide synthetase; Includes:
           RecName: Full=Phosphoribosylformylglycinamidine
           cyclo-ligase; AltName: Full=AIR synthase; Short=AIRS;
           AltName: Full=Phosphoribosyl-aminoimidazole synthetase
 gi|3335|emb|CAA27867.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1322895|emb|CAA96952.1| ADE5,7 [Saccharomyces cerevisiae]
 gi|151943584|gb|EDN61894.1| aminoimidazole ribotide synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190407168|gb|EDV10435.1| aminoimidazole ribotide synthetase [Saccharomyces cerevisiae
           RM11-1a]
 gi|285811984|tpg|DAA07884.1| TPA: Ade5,7p [Saccharomyces cerevisiae S288c]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|332709221|ref|ZP_08429187.1| biotin carboxylase [Lyngbya majuscula 3L]
 gi|332352030|gb|EGJ31604.1| biotin carboxylase [Lyngbya majuscula 3L]
          Length = 448

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  +++  VP   G   ++SS   A +  + +  P+ ++K+    GGRG
Sbjct: 120 AKETMQRAGVPTVPGSDGLVSSEQEAHAIARQIGYPV-MIKATAGGGGRG 168


>gi|332159927|ref|YP_004296504.1| phosphoribosylamine--glycine ligase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664157|gb|ADZ40801.1| phosphoribosylamine--glycine ligase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863077|emb|CBX73208.1| phosphoribosylamine--glycine ligase [Yersinia enterocolitica
           W22703]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLAEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|323355164|gb|EGA86992.1| Ade5,7p [Saccharomyces cerevisiae VL3]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|302560286|ref|ZP_07312628.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces griseoflavus Tu4000]
 gi|302477904|gb|EFL40997.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces griseoflavus Tu4000]
          Length = 405

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 51/180 (28%), Gaps = 51/180 (28%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  +  ++       +      G   V+K+ +  G  GK            GV V  S
Sbjct: 140 GVPCPRHRIVDGPEDVAAFAAEGEGFPVVLKT-VRGGYDGK------------GVWVVDS 186

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSGMVAF 133
            +      +               G  V     E+  D +REL  +++      +     
Sbjct: 187 AEEAAEPFK--------------AGVPV---LAEEKVDFVRELAANVVRSPHGQAVAYPV 229

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-------SEDVASLCDMLELQGQARID 186
           + S Q               +   +I P  G+         E   ++   L + G   ++
Sbjct: 230 VESRQVNG------------VCDTVIAPAPGLDEELALRAEEMALNIARELGVVGHLAVE 277


>gi|283832024|ref|ZP_06351765.1| acetyltransferase, GNAT family [Citrobacter youngae ATCC 29220]
 gi|291071641|gb|EFE09750.1| acetyltransferase, GNAT family [Citrobacter youngae ATCC 29220]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 76/237 (32%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTATEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKNKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+    G    LD  +  
Sbjct: 639 IRARSALRPLDIAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG-GEFTALDVTLDI 694


>gi|256272506|gb|EEU07486.1| Ade5,7p [Saccharomyces cerevisiae JAY291]
          Length = 802

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 20/106 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+             
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + SS+   +  I++I    ++TKQ G    +   V +E   +
Sbjct: 160 -GVIIPSSIDESVQAIKDI----MVTKQFGEEAGK--QVVIEQFLE 198


>gi|226355164|ref|YP_002784904.1| biotin carboxylase [Deinococcus deserti VCD115]
 gi|226317154|gb|ACO45150.1| putative Biotin carboxylase (Acetyl-CoA carboxylase subunit A)
           [Deinococcus deserti VCD115]
          Length = 445

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 9/105 (8%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            + +    NVPV  G  V+  V AA  A K +  P+  +K+    GGRG+   +     +
Sbjct: 119 GREIAAASNVPVVPGTGVLEDVDAALLAAKQIGYPVL-LKASAGGGGRGQKVIRTQEELA 177

Query: 67  KG-------GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
           KG            S    ++    E      +       G  ++
Sbjct: 178 KGFAQAQEEARLYFSDPAVIMEKFLEEFRHVEVQVMGDGKGHVIH 222


>gi|23098205|ref|NP_691671.1| phosphoribosylglycinamide synthetase [Oceanobacillus iheyensis
           HTE831]
 gi|22776430|dbj|BAC12706.1| phosphoribosylglycinamide synthetase [Oceanobacillus iheyensis
           HTE831]
          Length = 423

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V   V+ A+  ++    P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYAIPTAAYGVFIDVNEAKKMVEQQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  + +     I ++L
Sbjct: 152 -GVIVAMTEEEAYQAIDDML 170


>gi|256391600|ref|YP_003113164.1| carbamoyl-phosphate synthase, large subunit [Catenulispora
           acidiphila DSM 44928]
 gi|256357826|gb|ACU71323.1| carbamoyl-phosphate synthase, large subunit [Catenulispora
           acidiphila DSM 44928]
          Length = 1099

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K     S   A++    +  P+ V  S +  GGRG
Sbjct: 678 RVLAEAGLPAPKHGTAFSFAEAKAIADEIGYPVLVRPSYVL-GGRG 722


>gi|52548485|gb|AAU82334.1| carbamoyl-phosphate synthase large chain [uncultured archaeon
           GZfos14B8]
          Length = 1066

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 51/255 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + + N P+ +GV ++SV  AE  +  L  PL +  S    G             + G
Sbjct: 133 KQTMERINEPIPRGVTVNSVAEAEEVVGELGLPLIIRPSYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +L+ +   +             G   SR++ V VE+     +E+   ++ D   
Sbjct: 180 GI--ARTLEELRGIVS-----------YGLQVSRIHQVLVEESVLGWKEIEYEVMRDAKD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E +          +++ P   ++ E+          +   L ++G
Sbjct: 227 TCITI-------CNMENLDAMGIHTGESIVVTPTQTLSDEEHQMLRSAAIKIIRALRVEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLDIQ 240
              I    L   LY+   + +  +   + L     G     + +KI     A+  HLD  
Sbjct: 280 GCNIQLA-LKEGLYRV-IEVNPRVSRSSALASKATGYPIARVAAKI-----AIGLHLD-- 330

Query: 241 ELR-DVSEEDSREIE 254
           E+R DV+EE     E
Sbjct: 331 EIRNDVTEETPASFE 345


>gi|325526607|gb|EGD04152.1| CoA-binding domain protein [Burkholderia sp. TJI49]
          Length = 680

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 86/227 (37%), Gaps = 30/227 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           AK  L    +PV + V+     AA +A + +  P+   +V  QI            +   
Sbjct: 473 AKEALADAGLPVPRDVLAVDADAAVAAAEAMGYPVVLKIVSPQI------------VHKT 520

Query: 66  SKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             GGV +   +   V +  R+IL     + +    G++++ + V        E+ L +  
Sbjct: 521 EVGGVALDVRNADGVRAACRQILD----SVRAHAPGAQIDGILVCPMIVGGTEMILGVNN 576

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQA 183
           D  +     +    GG++ E         +    + P     + D      +L   +G A
Sbjct: 577 D-ATFGPMILV-GAGGVNTELYKDVS---LVSAPLTPARAREALDRVKATALLKGWRGAA 631

Query: 184 RIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
             D   L   + K    A    ++  +++NPL++ + G   VLD+ I
Sbjct: 632 PKDMDALVTAMVKLSDFAINHPEIISVDVNPLVVRERG-AAVLDAVI 677


>gi|317123313|ref|YP_004097425.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Intrasporangium calvum DSM 43043]
 gi|315587401|gb|ADU46698.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Intrasporangium calvum DSM 43043]
          Length = 1861

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 8   AKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +K +  +  VPV   ++G V  ++  A  A   +  P  ++K+    GGRG  +      
Sbjct: 130 SKLIAEEVGVPVAPWSRGGV-DTLEEATEAAARIGYP-LMLKATAGGGGRGIRKV----- 182

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSR 102
             +    +  + +    +     GS ++  +   TG+R
Sbjct: 183 --ESDAELTEAYERTRDEAARAFGSGVVFLEKLVTGAR 218


>gi|254526071|ref|ZP_05138123.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9202]
 gi|221537495|gb|EEE39948.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9202]
          Length = 1098

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K NV V    + S++  A    K +     +++     GG G G           
Sbjct: 133 KESMEKINVNVCPSGIASNLDEAMEVSKEISSYPLIIRPAFTLGGVGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +L+  +   +           +G   S  N + +E      +E  L ++ D  +
Sbjct: 182 ---IAFNLEEFVELCK-----------SGLEESPSNQILIEKSLIGWKEYELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|220917308|ref|YP_002492612.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955162|gb|ACL65546.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 1077

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V + K    +S   A +  + +  P+ +             R         G
Sbjct: 133 KEAMERVGVELPKSGYATSWEEARAIARDIGFPIII-------------RPSFTMGGEGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +L+      R  L  +             + +  E+     +E  L ++ DR  
Sbjct: 180 GV--AYNLEEFEPLARRALTLS-----------PTHTILCEESIIGWKEYELEVMRDRK- 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE            + + P   +T ++   + + 
Sbjct: 226 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRMREA 267


>gi|197122523|ref|YP_002134474.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter sp. K]
 gi|196172372|gb|ACG73345.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter sp.
           K]
          Length = 1077

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V + K    +S   A +  + +  P+ +             R         G
Sbjct: 133 KEAMERVGVELPKSGYATSWEEARAIARDIGFPIII-------------RPSFTMGGEGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +L+      R  L  +             + +  E+     +E  L ++ DR  
Sbjct: 180 GV--AYNLEEFEPLARRALTLS-----------PTHTILCEESIIGWKEYELEVMRDRK- 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE            + + P   +T ++   + + 
Sbjct: 226 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRMREA 267


>gi|256376789|ref|YP_003100449.1| phosphoribosylglycinamide synthetase [Actinosynnema mirum DSM
           43827]
 gi|255921092|gb|ACU36603.1| phosphoribosylglycinamide synthetase [Actinosynnema mirum DSM
           43827]
          Length = 415

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 34/124 (27%), Gaps = 19/124 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP    V + SV  A +A   L  P                  K     +  GV 
Sbjct: 122 LAEAGVPQPGSVPVKSVEDAVAAADRLGYP---------------AILKPRGLGASLGVI 166

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
                  V ++    L +         T   V    VE+          S++VD      
Sbjct: 167 KVEDADQVRANFAFTLAAEGPEPVVFDTDQPV---LVEEFVSGEEISVDSVVVDGEV-TP 222

Query: 132 AFIA 135
            F+ 
Sbjct: 223 LFVG 226


>gi|84626403|gb|ABC59741.1| succinate-coenzyme A ligase, ADP-forming, beta subunit
           [Spermophilus parryii]
          Length = 40

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 142 DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           +IE+VA + P  I K  +D + G+  E    L   +    
Sbjct: 1   NIEDVAAETPDAIVKEPVDIIEGIKKEQAVRLAQKMGFPP 40


>gi|262376207|ref|ZP_06069437.1| phosphoribosylamine-glycine ligase [Acinetobacter lwoffii SH145]
 gi|262308808|gb|EEY89941.1| phosphoribosylamine-glycine ligase [Acinetobacter lwoffii SH145]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVDAAKAFVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +     I ++L       + G  G   + V +E+        ++ ++
Sbjct: 154 -GVIVAMTNQEAFDAIDDMLA----GNKFGDAG---SRVVIEEFLAGEEASFICMI 201


>gi|187251441|ref|YP_001875923.1| carbamoyl-phosphate synthase, large subunit [Elusimicrobium minutum
           Pei191]
 gi|186971601|gb|ACC98586.1| Carbamoyl-phosphate synthase, large subunit [Elusimicrobium minutum
           Pei191]
          Length = 1102

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/232 (10%), Positives = 63/232 (27%), Gaps = 46/232 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + +  VP      + +V  A      +  P+    +    G               
Sbjct: 140 SKR-MHEIGVPTPPSKAVETVEEALKTALEIGYPVITRSAYALGGL-------------- 184

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G  +  + + +       L S+               + +E      +E+   ++ D  
Sbjct: 185 -GSGLAENPEQLEKLASSALTSS-------------PQILIEKSLHGWKEIEYEVMRDAC 230

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQ 180
              +          ++E            ++I P   + + +         ++   + + 
Sbjct: 231 GNSITI-------CNMENFDPMGIHTGDSIVIAPCQTLNNRENNMLRDAALNIVKSIGVV 283

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKI--SFD 229
           G+  +        L     + +  L   + L     G     + +K+   FD
Sbjct: 284 GECNVQFALSPFTLEYYVIEINARLSRSSALASKATGYPIAFVAAKVVSGFD 335


>gi|320196420|gb|EFW71044.1| Protein acetyltransferase [Escherichia coli WV_060327]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 79/238 (33%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + +  D   G +  +   +GG++        P+    + + PL       + +      
Sbjct: 586 RVVVEYDPVFGPLIMLG--EGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +    VLD  +  
Sbjct: 638 KIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTVLDVTLDI 694


>gi|320093611|ref|ZP_08025498.1| carbamoyl-phosphate synthase, large subunit [Actinomyces sp. oral
           taxon 178 str. F0338]
 gi|319979434|gb|EFW10909.1| carbamoyl-phosphate synthase, large subunit [Actinomyces sp. oral
           taxon 178 str. F0338]
          Length = 1099

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA++ +    VA+  +  ++    +A + L  PL V         R       L +    
Sbjct: 133 KAIVERSGAEVARSFIAHTMEECHAAAEQLGYPLVV---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 + + +     + L +++ T+           V +E+     +E  L L+ D+  
Sbjct: 181 ---FARTPEDLERIAGQGLAASITTE-----------VLLEESILGWKEYELELMRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +V           IE V          + + P + +T  ++  L D+
Sbjct: 227 NVVVV-------CSIENVDPVGVHTGDSVTVAPALTLTDRELQRLRDI 267


>gi|314927795|gb|EFS91626.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL044PA1]
 gi|328907259|gb|EGG27025.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium sp.
           P08]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR   
Sbjct: 673 LLAELGIPQAPGGTARSSEEALAVAEELGYPVLVRPSYV-IGGRAMA 718


>gi|313837185|gb|EFS74899.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL037PA2]
 gi|314971957|gb|EFT16055.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL037PA3]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR   
Sbjct: 673 LLAELGIPQAPGGTARSSEEALAVAEELGYPVLVRPSYV-IGGRAMA 718


>gi|296113103|ref|YP_003627041.1| phosphoribosylamine-glycine ligase [Moraxella catarrhalis RH4]
 gi|295920797|gb|ADG61148.1| phosphoribosylamine-glycine ligase [Moraxella catarrhalis RH4]
 gi|326560096|gb|EGE10486.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis 46P47B1]
 gi|326565789|gb|EGE15951.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis BC1]
 gi|326573419|gb|EGE23387.1| phosphoribosylamine--glycine ligase [Moraxella catarrhalis
           101P30B1]
          Length = 423

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A   V + + AA+  ++    P+ V+K+   A G+             
Sbjct: 108 AKEFMQKYGIPTAYYQVFTEIEAAKCYVREKGTPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V     +    I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMDEATAFDAIDDMLD----GNKFGDAG---SRVVIEQFLSGEEASFICMI 201


>gi|254293364|ref|YP_003059387.1| phosphoribosylamine/glycine ligase [Hirschia baltica ATCC 49814]
 gi|254041895|gb|ACT58690.1| phosphoribosylamine/glycine ligase [Hirschia baltica ATCC 49814]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++   VP A+    +    A++ +     P YV+K+   A G+             
Sbjct: 106 SKDLMKACGVPTAEYGRFTDAAEAKAFLDKFSAP-YVLKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV +  + +   S I ++L
Sbjct: 152 -GVVIAETREEAESSIDDML 170


>gi|25011128|ref|NP_735523.1| carbamoyl phosphate synthase large subunit [Streptococcus
           agalactiae NEM316]
 gi|60389788|sp|Q8E5F5|CARB_STRA3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|23095527|emb|CAD46736.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|77414495|ref|ZP_00790643.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae 515]
 gi|77159445|gb|EAO70608.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae 515]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|77410551|ref|ZP_00786912.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae CJB111]
 gi|77163499|gb|EAO74449.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae CJB111]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|77406311|ref|ZP_00783376.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae H36B]
 gi|77175087|gb|EAO77891.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae H36B]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|22537201|ref|NP_688052.1| carbamoyl phosphate synthase large subunit [Streptococcus
           agalactiae 2603V/R]
 gi|76798077|ref|ZP_00780333.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae 18RS21]
 gi|60389784|sp|Q8DZQ7|CARB_STRA5 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|22534066|gb|AAM99924.1|AE014239_16 carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae 2603V/R]
 gi|76586582|gb|EAO63084.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae 18RS21]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|313680221|ref|YP_004057960.1| carbamoyl-phosphate synthase large subunit [Oceanithermus profundus
           DSM 14977]
 gi|313152936|gb|ADR36787.1| carbamoyl-phosphate synthase large subunit [Oceanithermus profundus
           DSM 14977]
          Length = 1024

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 35/173 (20%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA   ++K  + V +G ++SS+    +  + +  P+ V                  P+ 
Sbjct: 132 FQAA--MKKIGLDVPRGRMVSSLEDGLAFAREVGYPVIV-----------------RPSF 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + GG     +       +RE+LG  L            +   VE+     +E  L ++ D
Sbjct: 173 TLGGTGGGVAADEA--ALRELLGRGLRLS-------PAHTALVEESIVGWKEYELEVMRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             +  V  I S      IE V          + + P   +T  +   + D  +
Sbjct: 224 -HADTVVIITS------IENVDPMGVHTGDSITVAPAQTLTDVEYQKMRDAAK 269


>gi|313673042|ref|YP_004051153.1| phosphoribosylamine--glycine ligase [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312939798|gb|ADR18990.1| phosphoribosylamine--glycine ligase [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 426

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    +P A      +   A   +K    P+ V+K+   A G+             
Sbjct: 108 AKEIMVSAGIPTAYYREFDNFEGALKFLKEKGVPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +       +REI    L     G  G   N V +E+        ++++ 
Sbjct: 154 -GVTVAHNFNEAEKALREIFIDNLF----GEAG---NKVVIEEFLTGEEASFIAIT 201


>gi|296122916|ref|YP_003630694.1| cyanophycin synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015256|gb|ADG68495.1| cyanophycin synthetase [Planctomyces limnophilus DSM 3776]
          Length = 871

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 35/158 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K++LR   VPV +G  +     A  A + + GP+ V               K + A+   
Sbjct: 219 KSMLRAAGVPVPEGREVKDPGDAWEASQEIEGPIVV---------------KPIDANHGR 263

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +    +  I D         +      +G  V       G++      L ++ DR  
Sbjct: 264 GVCMNLETEEEIRDA-------FVVASQEGSGVIVERF--APGSEHR----LLVVGDR-- 308

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI--DPLIG 164
                 AS      IE   +    ++ +  +  DP  G
Sbjct: 309 ---LVAASRGDAAKIEGDGEHNVAELIQRQVNSDPRRG 343


>gi|260779566|ref|ZP_05888456.1| phosphoribosylamine--glycine ligase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604375|gb|EEX30679.1| phosphoribosylamine--glycine ligase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGQS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|145636982|ref|ZP_01792646.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae PittHH]
 gi|145269840|gb|EDK09779.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae PittHH]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|87301191|ref|ZP_01084032.1| phosphoribosylamine--glycine ligase [Synechococcus sp. WH 5701]
 gi|87284159|gb|EAQ76112.1| phosphoribosylamine--glycine ligase [Synechococcus sp. WH 5701]
          Length = 441

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 15/84 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  VP A     SS   A + +     P  VVK+   A G+             
Sbjct: 125 AKALMLEAGVPTAGYWAASSRSEALAVLDREGRP-LVVKADGLAAGK------------- 170

Query: 68  GGVRVESSLKSVISDIREILGSTL 91
            GV V  SL+   + I EI     
Sbjct: 171 -GVTVAESLEDTRAAIEEIFAGRF 193


>gi|238785565|ref|ZP_04629546.1| Phosphoribosylamine--glycine ligase [Yersinia bercovieri ATCC
           43970]
 gi|238713550|gb|EEQ05581.1| Phosphoribosylamine--glycine ligase [Yersinia bercovieri ATCC
           43970]
          Length = 428

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|241890143|ref|ZP_04777441.1| phosphoribosylamine--glycine ligase [Gemella haemolysans ATCC
           10379]
 gi|241863765|gb|EER68149.1| phosphoribosylamine--glycine ligase [Gemella haemolysans ATCC
           10379]
          Length = 411

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 50/119 (42%), Gaps = 22/119 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++RKYN+P AK    +    A+  +     P+ V+K+   A G+             
Sbjct: 102 SKMMMRKYNIPTAKYESFNDYEQAKEYLSKQKAPI-VLKADGLAAGK------------- 147

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV + ++L+   ++++E+    +   +    G   + V +E+         +  + DR
Sbjct: 148 -GVIIANTLEEAQAELKEM----MCNAKFNKAG---SSVVIEEFLQGEEFSLMCFVSDR 198


>gi|291295303|ref|YP_003506701.1| carbamoyl-phosphate synthase large subunit [Meiothermus ruber DSM
           1279]
 gi|290470262|gb|ADD27681.1| carbamoyl-phosphate synthase, large subunit [Meiothermus ruber DSM
           1279]
          Length = 1038

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            L     +P  KG V  +   A    +TL  PL    S +  G
Sbjct: 693 QLCAALGIPQPKGAVARTPEEALKLAETLGYPLMARPSYVLGG 735



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 28/134 (20%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E+Q KA+L K  V V +G ++ S+    +  + + G   VV+     GG G G       
Sbjct: 131 EFQ-KAML-KIGVDVPRGKMVHSLEEGLAFAREVTGYPVVVRPSFTLGGTGGG------- 181

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                      +    ++  EIL   L    T       +   VE+     +E  L ++ 
Sbjct: 182 -----------IAENEAEFVEILSRGLSLSPT-------HSALVEESIVGWKEYELEVMR 223

Query: 125 DRTSGMVAFIASTQ 138
           D+ +  V  I S +
Sbjct: 224 DK-NDTVVIITSIE 236


>gi|295130560|ref|YP_003581223.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes SK137]
 gi|291375949|gb|ADD99803.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes SK137]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDETELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|167752764|ref|ZP_02424891.1| hypothetical protein ALIPUT_01025 [Alistipes putredinis DSM 17216]
 gi|167659833|gb|EDS03963.1| hypothetical protein ALIPUT_01025 [Alistipes putredinis DSM 17216]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY 43
           K L +    PV   ++ +++  A  A K +  P+ 
Sbjct: 133 KELCQSLGEPVLPSLIANNIDEAVEAAKRIGYPVV 167



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            ++ +  +P  +   ++ + A   A + +  P+ V  S +  G
Sbjct: 669 KIMEELGIPQPEAEAVTDIEAGVRAAERIGYPVLVRPSYVLGG 711


>gi|167035865|ref|YP_001671096.1| phosphoribosylamine--glycine ligase [Pseudomonas putida GB-1]
 gi|166862353|gb|ABZ00761.1| phosphoribosylamine--glycine ligase [Pseudomonas putida GB-1]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLQEKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLDEAEAAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|21219984|ref|NP_625763.1| carbamoyl phosphate synthase large subunit [Streptomyces coelicolor
           A3(2)]
 gi|256788917|ref|ZP_05527348.1| carbamoyl phosphate synthase large subunit [Streptomyces lividans
           TK24]
 gi|289772804|ref|ZP_06532182.1| carbamoyl-phosphate synthase, large subunit [Streptomyces lividans
           TK24]
 gi|22095536|sp|Q9KXR6|CARB_STRCO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|8249942|emb|CAB93363.1| carbamoylphosphate synthetase large chain [Streptomyces coelicolor
           A3(2)]
 gi|289703003|gb|EFD70432.1| carbamoyl-phosphate synthase, large subunit [Streptomyces lividans
           TK24]
          Length = 1102

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFGEAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|333029463|ref|ZP_08457524.1| Phosphoribosylamine--glycine ligase [Bacteroides coprosuis DSM
           18011]
 gi|332740060|gb|EGJ70542.1| Phosphoribosylamine--glycine ligase [Bacteroides coprosuis DSM
           18011]
          Length = 424

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 26/130 (20%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + KY +P AK   I+  ++    + +++L  P YV+K+     G+           
Sbjct: 110 AKQFMFKYGIPTAKYKSITHNNLEEGFAFLESLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV + S L+    +++E+L            G     V +E+      E  + +L D
Sbjct: 158 ---GVLILSDLEEAKKELKEMLSGRF--------GDASTTVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVAFIA 135
             +  +  +A
Sbjct: 206 GENYKILPVA 215


>gi|324991153|gb|EGC23087.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK353]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|318607522|emb|CBY29020.1| phosphoribosylamine--glycine ligase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLAEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|313500802|gb|ADR62168.1| Phosphoribosylamine--glycine ligase [Pseudomonas putida BIRD-1]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLQEKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLEEAEAAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|295399674|ref|ZP_06809655.1| pyruvate carboxylase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978077|gb|EFG53674.1| pyruvate carboxylase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 1147

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 39/212 (18%)

Query: 6   YQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +QAK  L    +PV  G    + S+       +T   P+ ++K+ +  GGRG    +   
Sbjct: 126 HQAK--LA--GIPVIPGSDGPVHSLEEVVHFAETYGYPI-IIKAALGGGGRGMRIVRS-- 178

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              K  V+     +   S+ +   GS                VYVE   +  + + + +L
Sbjct: 179 ---KSEVKEAY--ERAKSEAKAAFGSD--------------DVYVEKLIERPKHIEVQIL 219

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D        I   +    ++   +   +    + +     +      +   +++  G  
Sbjct: 220 GDYEGN---IIHLYERDCSVQRRHQKVVEVAPSVSL--SDELRQRICEAAVKLMKNVGYV 274

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
                +   +        D   +E+NP I ++
Sbjct: 275 NAGTVEFLVS------GDDFYFIEVNPRIQVE 300


>gi|282896367|ref|ZP_06304388.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Raphidiopsis brookii D9]
 gi|281198655|gb|EFA73535.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Raphidiopsis brookii D9]
          Length = 1083

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 32/166 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + K  V V      S++  +++  + +     +++     GG G G              
Sbjct: 136 MEKIGVSVCPSGTASTLEESKAIAQRIGSYPLIIRPAFTMGGTGGG-------------- 181

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  + +              +  Q G   S V+ + ++      +E  L ++ D  +  V
Sbjct: 182 IAYNKEEFE-----------VMAQVGIDASPVSQILIDQSLLGWKEYELEVMRD-LADNV 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             I S      IE +          + + P   +T ++   L DM 
Sbjct: 230 VIICS------IENLDPMGIHTGDSITVAPAQTLTDKEYQRLRDMA 269


>gi|170723774|ref|YP_001751462.1| phosphoribosylamine--glycine ligase [Pseudomonas putida W619]
 gi|169761777|gb|ACA75093.1| phosphoribosylamine--glycine ligase [Pseudomonas putida W619]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLQEKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLEEAEAAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|76788218|ref|YP_329753.1| carbamoyl phosphate synthase large subunit [Streptococcus
           agalactiae A909]
 gi|123601807|sp|Q3K150|CARB_STRA1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|76563275|gb|ABA45859.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae A909]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|77408053|ref|ZP_00784801.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae COH1]
 gi|77173318|gb|EAO76439.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           agalactiae COH1]
          Length = 1060

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           L+  N+P   G   ++   A +A + +  P+ V  S +  G   K
Sbjct: 674 LQALNIPQPPGFTATTEEEAVNAAQKIGYPVLVRPSYVLGGRAMK 718



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  +++SV  A    + +  PL V
Sbjct: 133 KQLMEELNQPIPESEIVNSVEEAIQFAEQIGYPLIV 168


>gi|325694502|gb|EGD36411.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK150]
 gi|325696505|gb|EGD38395.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK160]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|301168427|emb|CBW28017.1| putative biotin carboxylase [Bacteriovorax marinus SJ]
          Length = 482

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 46/217 (21%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  VP   G    + SV  A      +  P+                 K +   
Sbjct: 126 SKQLANQVGVPTVPGTDKAVESVEEAVEISAKIGYPVL---------------LKAVAGG 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R  ++ + V ++   +   +L     G     V  + V       R + + +L D
Sbjct: 171 GGRGMRACANEEEVRANFEAVGRESLAAFNNG--DLLVEKLIVNP-----RHIEVQILAD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLE 178
           +   +  F        + E   +   QKI +    P IG          E    L   + 
Sbjct: 224 KKGNVYHF-------FERECSIQRRHQKIIEEAPSPFIGDDEELRQNVCETAVKLAKAVN 276

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
                     +          DK    LE+N  I ++
Sbjct: 277 YD---SAGTVEFIMG-----EDKSFYFLEMNTRIQVE 305


>gi|300726773|ref|ZP_07060203.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella bryantii
           B14]
 gi|299775886|gb|EFI72466.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella bryantii
           B14]
          Length = 393

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 36/186 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     +    + A   +  P  VVK  + + G G+                  +
Sbjct: 115 GLRTAKYFYAKTFDEFKKAADEIGFPC-VVKPLMSSSGHGQSY--------------VHN 159

Query: 76  LKSVISDIREILGSTLITKQTGPTGS-RVNCVYVEDGADILRELYLSLLVDRTSGMVAF- 133
              +    ++              G   V  V +E+  D   E  L  L      +    
Sbjct: 160 DDELKEAFKD----------AMEEGRGDVKEVIIEEFIDFDSEFTL--LTVTQKNLPTLF 207

Query: 134 ---IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC--DMLELQGQARIDGG 188
              I   Q G D  E     P +I +  +     +  E   +L    +  ++      G 
Sbjct: 208 CPPIGHIQKGGDYRESW--MPYQISEEALKTAEHMADEVTKALTGYGIWGVEFFLTKQGE 265

Query: 189 DLFPNL 194
            +F  L
Sbjct: 266 VIFSEL 271


>gi|312111807|ref|YP_003990123.1| pyruvate carboxylase [Geobacillus sp. Y4.1MC1]
 gi|311216908|gb|ADP75512.1| pyruvate carboxylase [Geobacillus sp. Y4.1MC1]
          Length = 1147

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 39/212 (18%)

Query: 6   YQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +QAK  L    +PV  G    + S+       +T   P+ ++K+ +  GGRG    +   
Sbjct: 126 HQAK--LA--GIPVIPGSDGPVHSLEEVVHFAETYGYPI-IIKAALGGGGRGMRIVRS-- 178

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              K  V+     +   S+ +   GS                VYVE   +  + + + +L
Sbjct: 179 ---KSEVKEAY--ERAKSEAKAAFGSD--------------DVYVEKLIERPKHIEVQIL 219

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D        I   +    ++   +   +    + +     +      +   +++  G  
Sbjct: 220 GDYEGN---IIHLYERDCSVQRRHQKVVEVAPSVSL--SDELRQRICEAAVKLMKNVGYV 274

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
                +   +        D   +E+NP I ++
Sbjct: 275 NAGTVEFLVS------GDDFYFIEVNPRIQVE 300


>gi|145589096|ref|YP_001155693.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047502|gb|ABP34129.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 678

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G    I +   A    + +  P+ +  S                  
Sbjct: 123 SKKLALEAKVNTIPGYNEAIDTTEEAVKIAQGIGYPVMIKAS---------------AGG 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K               T+     G   + +++E   +  R + + +L D
Sbjct: 168 GGKGLRVAFNDKEAAEGFAAC-----KTEAMNSFGD--DRIFIEKFVEGPRHIEIQVLGD 220

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                   +   +    I+   +   ++     IDP       E   +L   +  Q    
Sbjct: 221 SQGN---VVYLNERDCSIQRRHQKVIEEAPSPFIDPATRKAMGEQAVALAKAVNYQSAGT 277

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             DK    LE+N
Sbjct: 278 VEFV--------VGKDKSFYFLEMN 294


>gi|268529976|ref|XP_002630114.1| C. briggsae CBR-PYR-1 protein [Caenorhabditis briggsae]
          Length = 2198

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 64/225 (28%), Gaps = 46/225 (20%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +        VA     +++  A  A + L  P+ V  +    G            
Sbjct: 512 RDLFNQEISAVGEKVAPSKAATTMEGAIEAAEELGYPVLVRAAYALGGL----------- 560

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G     + + +I+  ++ L  +             N V V+      +E+   ++ 
Sbjct: 561 ----GSGFADNREELIAIAQQALAHS-------------NQVLVDKSLKGWKEVEYEVVR 603

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D     +          ++E V          +++ P   ++ ++          +   L
Sbjct: 604 DAYDNCITV-------CNMENVDPLGIHTGESVVVAPSQTLSDKEYNALRTCAIKVIRHL 656

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
            + G+  I       +L     + +  L   + L     G     
Sbjct: 657 GIIGECNIQYALDPNSLTYYIIEVNARLSRSSALASKATGYPLAY 701


>gi|332366892|gb|EGJ44633.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK1059]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|332360451|gb|EGJ38262.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK355]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|328760626|gb|EGF74193.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL099PA1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|322376893|ref|ZP_08051386.1| hypothetical protein HMPREF0851_00684 [Streptococcus sp. M334]
 gi|321282700|gb|EFX59707.1| hypothetical protein HMPREF0851_00684 [Streptococcus sp. M334]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    +  +K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQVVKEIGLPM 150


>gi|319948427|ref|ZP_08022565.1| GNAT acetyltransferase [Dietzia cinnamea P4]
 gi|319437909|gb|EFV92891.1| GNAT acetyltransferase [Dietzia cinnamea P4]
          Length = 922

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 24/70 (34%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q +ALL  Y + +    V++ V  A  A   L  P+ V         R       L    
Sbjct: 706 QVRALLECYGIDIVDYRVVTDVDQAVMAADELGYPVAVKAMSDRWRTRSDQSGVRLDLAD 765

Query: 67  KGGVRVESSL 76
              VR   +L
Sbjct: 766 SAAVRHAFAL 775


>gi|315108362|gb|EFT80338.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL030PA2]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|315080677|gb|EFT52653.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL078PA1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|313818526|gb|EFS56240.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL046PA2]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|301154809|emb|CBW14272.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Haemophilus parainfluenzae T3T1]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|301061266|ref|ZP_07202048.1| conserved domain protein [delta proteobacterium NaphS2]
 gi|300444585|gb|EFK08568.1| conserved domain protein [delta proteobacterium NaphS2]
          Length = 244

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E ++K LL  Y +PV +  V  S+  A      +  PL +         + + R      
Sbjct: 150 EAESKRLLACYGIPVNRTEVAESMDEALRLAADMGYPLVMKILSPDIVHKTEARGIRTDL 209

Query: 65  DSKGGVRVESSL 76
            SK  VR     
Sbjct: 210 GSKQEVRDAYDK 221


>gi|298481150|ref|ZP_06999344.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D22]
 gi|298272724|gb|EFI14291.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D22]
          Length = 389

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     ++   + A   +  P  VVK  + + G+G+           
Sbjct: 112 AKEL----GLKTAKYFYAKTLDELKEAAAKVGFPC-VVKPLMSSSGKGQSL--------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                  +G  G  +  V +E+      E  ++LL    
Sbjct: 158 --VKSADELEHAWEY-----------GCSGSRGD-IREVIIEEFIKFDSE--ITLLTVTQ 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 202 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 233


>gi|262279578|ref|ZP_06057363.1| phosphoribosylamine-glycine ligase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259929|gb|EEY78662.1| phosphoribosylamine-glycine ligase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|291287044|ref|YP_003503860.1| alpha-L-glutamate ligase, RimK family [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884204|gb|ADD67904.1| alpha-L-glutamate ligase, RimK family [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 300

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K+NV + K     +     S I+ + GP  ++K  +  G +G             G
Sbjct: 105 QILSKHNVNIPKTAFACTPENVNSIIENVGGPPVIIK--LLEGTQGI------------G 150

Query: 70  VRVESSLKSVISDIREILGSTL 91
           V +  + K+  S I    G  +
Sbjct: 151 VVLADTYKAAKSVIEAFYGMKV 172


>gi|170025560|ref|YP_001722065.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis
           YPIII]
 gi|186894219|ref|YP_001871331.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis
           PB1/+]
 gi|169752094|gb|ACA69612.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697245|gb|ACC87874.1| GCN5-related N-acetyltransferase [Yersinia pseudotuberculosis
           PB1/+]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++ ++     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMVLARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|50842483|ref|YP_055710.1| carbamoyl phosphate synthase large subunit [Propionibacterium acnes
           KPA171202]
 gi|81826456|sp|Q6A914|CARB_PROAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|50840085|gb|AAT82752.1| carbamoyl-phosphate synthase large chain [Propionibacterium acnes
           KPA171202]
 gi|315105418|gb|EFT77394.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL030PA1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|332360885|gb|EGJ38691.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK49]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|312875938|ref|ZP_07735928.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797419|gb|EFR13758.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 1075

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 17/107 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+    G    ++  A     +L  P+ V  S +  G                G
Sbjct: 676 KILNKLNIKRPPGYTCYTLQEALRIANSLGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDI--REILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++      ++  +   + L S  I       G  +    + DG DI
Sbjct: 721 MKIAFDDDDIVEMLSYAKNLNSHPILIDKYIVGKEIEVDAISDGEDI 767


>gi|299769485|ref|YP_003731511.1| phosphoribosylamine--glycine ligase [Acinetobacter sp. DR1]
 gi|298699573|gb|ADI90138.1| phosphoribosylamine--glycine ligase [Acinetobacter sp. DR1]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +   + I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNEEAFAAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|297157922|gb|ADI07634.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces bingchenggensis BCW-1]
          Length = 372

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 60/214 (28%), Gaps = 58/214 (27%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  LR   VP  +  +++     E       G   V+K+ +  G  GK            
Sbjct: 100 RERLRAAGVPCPRHRIVADPADVERFAAEGDGFPVVLKT-VRGGYDGK------------ 146

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V    +      R               G  V     E+  D  REL  +++     
Sbjct: 147 GVWVVGDAEEAAEPFR--------------AGVPV---LAEEKVDFARELAANVVRSPHG 189

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQG 181
                       +    V       +   +I P  G++        E    +   L + G
Sbjct: 190 Q----------AVAYPVVESIQVNGVCDTVIAPAPGLSEELSGQAQEMAIKIAAELGVVG 239

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
              ++           F  +D  LL +N L +  
Sbjct: 240 HLAVE----------LFETRDGRLL-VNELAMRP 262


>gi|291520625|emb|CBK75846.1| phosphoribosylamine--glycine ligase [Butyrivibrio fibrisolvens
           16/4]
          Length = 422

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A     +   AA   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAGYENFTDPEAALKYLETAKYPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  ++ + EI    +  K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICETHEDAVAGVAEI----MQDKKFGDAG---NTMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              V  ++S Q 
Sbjct: 201 GNTVKIMSSAQD 212


>gi|289427092|ref|ZP_06428808.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes J165]
 gi|289159561|gb|EFD07749.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes J165]
 gi|313772127|gb|EFS38093.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL074PA1]
 gi|313807482|gb|EFS45969.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL087PA2]
 gi|313809991|gb|EFS47712.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL083PA1]
 gi|313820293|gb|EFS58007.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL036PA1]
 gi|313822899|gb|EFS60613.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL036PA2]
 gi|313825168|gb|EFS62882.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL063PA1]
 gi|313830319|gb|EFS68033.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL007PA1]
 gi|313833694|gb|EFS71408.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL056PA1]
 gi|314925179|gb|EFS89010.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL036PA3]
 gi|314960037|gb|EFT04139.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL002PA2]
 gi|314973324|gb|EFT17420.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL053PA1]
 gi|314976002|gb|EFT20097.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL045PA1]
 gi|314978460|gb|EFT22554.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL072PA2]
 gi|314983978|gb|EFT28070.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL005PA1]
 gi|314988161|gb|EFT32252.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL005PA2]
 gi|314989965|gb|EFT34056.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL005PA3]
 gi|315085691|gb|EFT57667.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL002PA3]
 gi|315088888|gb|EFT60864.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL072PA1]
 gi|315096239|gb|EFT68215.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL038PA1]
 gi|327326152|gb|EGE67942.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL096PA2]
 gi|327331972|gb|EGE73709.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL096PA3]
 gi|327443174|gb|EGE89828.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL013PA2]
 gi|327445961|gb|EGE92615.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL043PA2]
 gi|327448060|gb|EGE94714.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL043PA1]
 gi|328753505|gb|EGF67121.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL020PA1]
 gi|332675400|gb|AEE72216.1| carbamoyl-phosphate synthase large chain [Propionibacterium acnes
           266]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|269836409|ref|YP_003318637.1| acetyl-CoA carboxylase, biotin carboxylase [Sphaerobacter
           thermophilus DSM 20745]
 gi|269785672|gb|ACZ37815.1| acetyl-CoA carboxylase, biotin carboxylase [Sphaerobacter
           thermophilus DSM 20745]
          Length = 457

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+A++RK  +P+  GV   +    AA    K +  P+ + K+    GGRG
Sbjct: 119 ARAMMRKAGLPIIPGVEEPVHDTTAAREVAKRIGYPVLI-KAVAGGGGRG 167


>gi|259906950|ref|YP_002647306.1| Phosphoribosylamine-glycine ligase [Erwinia pyrifoliae Ep1/96]
 gi|224962572|emb|CAX54027.1| Phosphoribosylamine-glycine ligase [Erwinia pyrifoliae Ep1/96]
 gi|283476744|emb|CAY72579.1| phosphoribosylamine-glycine ligase [Erwinia pyrifoliae DSM 12163]
          Length = 426

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYVRKKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|170290426|ref|YP_001737242.1| lysine biosynthesis enzyme LysX [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174506|gb|ACB07559.1| lysine biosynthesis enzyme LysX [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 279

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            +P  K  V  S   A  A K +  P+ VVK    + GR
Sbjct: 98  GIPTPKTAVAFSPEGALRAAKEIGFPV-VVKPVNGSWGR 135


>gi|297620244|ref|YP_003708349.1| acetyl-CoA carboxylase, biotin carboxylase [Methanococcus voltae
           A3]
 gi|297379221|gb|ADI37376.1| acetyl-CoA carboxylase, biotin carboxylase [Methanococcus voltae
           A3]
          Length = 504

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  ++K  VPV  G    I     A    K +  P+ ++K+    GG G
Sbjct: 119 AKKTMKKAGVPVLPGREEPIEDEGEAAKIAKEIGYPV-IIKASAGGGGIG 167


>gi|70607355|ref|YP_256225.1| carbamoyl phosphate synthase large subunit [Sulfolobus
           acidocaldarius DSM 639]
 gi|76364099|sp|Q4J8E8|CARB_SULAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|68568003|gb|AAY80932.1| carbamoyl-phosphate synthase L chain [Sulfolobus acidocaldarius DSM
           639]
          Length = 1052

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 54/153 (35%)

Query: 9   KALLRKYNV----------------------------PVAKGVVISSVHAAESAIKTLPG 40
           K +L+KY V                            PV   +   S   A    + +  
Sbjct: 103 KEILKKYGVKVLGTPIEGIERALSREKFRETMINVNLPVPPSLSARSEEEALEKARQIGY 162

Query: 41  PLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           P+ V +   + GGRG                V  S + +  DI   L  +          
Sbjct: 163 PVMV-RVSFNLGGRGS--------------TVAWSEEDLKRDIGRALSQS---------- 197

Query: 101 SRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
             ++ V +E       EL   ++ D+       
Sbjct: 198 -YIHEVLIEKYLHHWIELEYEVMRDKHGNSAVI 229


>gi|298385479|ref|ZP_06995037.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           1_1_14]
 gi|298261620|gb|EFI04486.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           1_1_14]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 46/155 (29%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  A      ++   + A   +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTANYFYAKTLDELKEAAAKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                  +G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKGADELEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|296535845|ref|ZP_06898005.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263825|gb|EFH10290.1| 6-carboxyhexanoate-CoA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 689

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 75/220 (34%), Gaps = 20/220 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N++E ++KAL  ++ VPV +  V +    A +A + L G + V+K       R      +
Sbjct: 475 NLNEAESKALFARFGVPVTREYVAADADGALAAARALGGEV-VLK----LLSRAIAHKSD 529

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGVRV  + ++V      +L          P         V++      E+ L 
Sbjct: 530 L-----GGVRVGLAAEAVPEACATMLRRLAAAGAPAPE-----GFLVQERIRGGVEMILG 579

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
              D   G V  + S  GG+  E       + +     D    V     A L        
Sbjct: 580 FHRDPQLGPVILLGS--GGVAAELFQDTTLRLLPIARADAEAMVGELKAARLLRGYRGAP 637

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLL--EINPLIIMKNGR 218
                   D               LL  EINPL ++  G+
Sbjct: 638 AADIPALVDAVMAFAAMAGAAGERLLEAEINPLFVLPEGQ 677


>gi|172056939|ref|YP_001813399.1| acetyl-CoA carboxylase, biotin carboxylase [Exiguobacterium
           sibiricum 255-15]
 gi|171989460|gb|ACB60382.1| acetyl-CoA carboxylase, biotin carboxylase [Exiguobacterium
           sibiricum 255-15]
          Length = 452

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 58/176 (32%), Gaps = 27/176 (15%)

Query: 8   AKALLRKYNVPVAKGVVIS-SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           AK  +    VPV  G   + +   A      +  P+ ++K+    GGRG          +
Sbjct: 120 AKQTMIACGVPVVPGSAGTVTDEEALQLGDEIGYPV-IIKATAGGGGRG-------IRVA 171

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +    + + L     + ++  G+              + VY+E   +  R + + +L DR
Sbjct: 172 RSQEELVTGLDETRREAKQAFGN--------------SEVYLERFIEEFRHVEVQVLADR 217

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQG 181
                  I   +    ++   +   ++     + P   +   E        ++  G
Sbjct: 218 HGN---VIHLGERDCTVQRRMQKLIEEAPSPAVSPATRLKMGEAAVKAAKAIDYTG 270


>gi|149637432|ref|XP_001513896.1| PREDICTED: similar to glycinamide ribonucleotide formyltransferase
           [Ornithorhynchus anatinus]
          Length = 1008

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ VP A+    +    A   I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGVPTARWKAFTDSQEACDFISSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++ +     ++EI+         G  G     V +E+  +   E+      D  
Sbjct: 157 -GVIVATNKEEACKAVQEIMQDR----AFGGAG---ETVVIEELLE-GEEVSCLCFSDGK 207

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 208 TVAPMLPA 215


>gi|61966461|emb|CAG47114.1| glycinamide ribonucleotide synthetase, isoform 2 [Bos taurus]
          Length = 433

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 21/119 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +  A+    +    A   I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGISTARWRAFTKPKEACDFIMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V  S +     +REI    +  K  G  G     V +E+  +      L     R
Sbjct: 157 -GVIVAKSKEEACEAVREI----MQGKAFGEAG---ETVVIEELLEGEEVSCLCFTDGR 207


>gi|332185504|ref|ZP_08387252.1| phosphoribosylamine--glycine ligase [Sphingomonas sp. S17]
 gi|332014482|gb|EGI56539.1| phosphoribosylamine--glycine ligase [Sphingomonas sp. S17]
          Length = 428

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 14/79 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L R+ ++P A  V +S++  A++A+ T  G   V+K+   A G+              
Sbjct: 107 KDLCRRADIPTAGYVRVSTLEEAQAALATTFGLPVVIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREIL 87
           GV V  +     + I ++ 
Sbjct: 153 GVTVAFTKAEAEAAITDLF 171


>gi|323190137|gb|EFZ75415.1| phosphoribosylamine--glycine ligase [Escherichia coli RN587/1]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|323351571|ref|ZP_08087225.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis VMC66]
 gi|322122057|gb|EFX93783.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis VMC66]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|314915483|gb|EFS79314.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL005PA4]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|313764490|gb|EFS35854.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL013PA1]
 gi|313816029|gb|EFS53743.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL059PA1]
 gi|313827741|gb|EFS65455.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL063PA2]
 gi|314918233|gb|EFS82064.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL050PA1]
 gi|314920046|gb|EFS83877.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL050PA3]
 gi|314932060|gb|EFS95891.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL067PA1]
 gi|314955931|gb|EFT00331.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL027PA1]
 gi|314958136|gb|EFT02239.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL002PA1]
 gi|314967797|gb|EFT11896.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL037PA1]
 gi|315098501|gb|EFT70477.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL059PA2]
 gi|315101142|gb|EFT73118.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL046PA1]
 gi|327450817|gb|EGE97471.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL087PA3]
 gi|327453837|gb|EGF00492.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL083PA2]
 gi|328754237|gb|EGF67853.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL087PA1]
 gi|328754513|gb|EGF68129.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL025PA2]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|307718938|ref|YP_003874470.1| phosphoribosylamine--glycine ligase [Spirochaeta thermophila DSM
           6192]
 gi|306532663|gb|ADN02197.1| phosphoribosylamine--glycine ligase [Spirochaeta thermophila DSM
           6192]
          Length = 414

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +R+Y V  A  ++  S+  A    +    P  V+K+   A G+             
Sbjct: 106 AKEFMRRYGVATADYLITDSLPEALGFAQRSDYP-LVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  S +        IL + +  +  G  G     V +E+  + +    LS+ 
Sbjct: 152 -GVTIVQSREE----AERILRAYMEERIFGEAG---TTVVLEEFLEGVEASILSIT 199


>gi|302059008|ref|ZP_07250549.1| urea amidolyase-related protein [Pseudomonas syringae pv. tomato
           K40]
          Length = 621

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPLLEGTELLDSLESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   + +       
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPEGMADELCAAAIKLAKAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|289425379|ref|ZP_06427156.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes SK187]
 gi|289154357|gb|EFD03045.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes SK187]
 gi|313792178|gb|EFS40279.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL110PA1]
 gi|313801871|gb|EFS43105.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL110PA2]
 gi|313838697|gb|EFS76411.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL086PA1]
 gi|315078052|gb|EFT50103.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL053PA2]
 gi|327330221|gb|EGE71970.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL097PA1]
 gi|327453105|gb|EGE99759.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL092PA1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|51595201|ref|YP_069392.1| acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Yersinia
           pseudotuberculosis IP 32953]
 gi|51588483|emb|CAH20091.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding [Yersinia
           pseudotuberculosis IP 32953]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++ ++     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMVLARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|124266531|ref|YP_001020535.1| phosphoribosylamine--glycine ligase [Methylibium petroleiphilum
           PM1]
 gi|124259306|gb|ABM94300.1| phosphoribosylamine--glycine ligase [Methylibium petroleiphilum
           PM1]
          Length = 430

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 22/114 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++ +P A     S   AA + +  +  P+ VVK+   A G+             
Sbjct: 106 SKDFMKRHGIPTAAYETFSDAAAAHAYVDRMGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL------GSTLITKQTGPTGSRVNCVYV-EDGADI 114
            GV V ++L      +  +L          +T   G     +      E+ + I
Sbjct: 152 -GVVVAATLDEAHQAVDWMLAGHSGDNKLGVTHNAGGARVVIEEFLAGEEASFI 204


>gi|327460354|gb|EGF06691.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK1057]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|315222967|ref|ZP_07864846.1| conserved hypothetical protein [Streptococcus anginosus F0211]
 gi|315187917|gb|EFU21653.1| conserved hypothetical protein [Streptococcus anginosus F0211]
          Length = 386

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K L +K  VPV  G ++ ++ A + A+  +  P  + K     G  G
Sbjct: 117 KKLFKKAGVPVVPGQIVKTLQAVDMAVSKIGLP-LIAKPDNGVGAAG 162


>gi|313812977|gb|EFS50691.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL025PA1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|307325799|ref|ZP_07604999.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113]
 gi|306888587|gb|EFN19573.1| CoA-binding domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 691

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+ L+R          ++++V  A  A + + G + VVK+ +    +       L  +  
Sbjct: 491 ARELIRAAGAHFPAARLVTTVDEAVEAAREIGGRV-VVKA-LGLLHKSDSGGVALRLEGD 548

Query: 68  GGVRVE 73
             VR  
Sbjct: 549 AAVRCA 554


>gi|261362648|gb|ACX71633.1| biotin carboxylase [Muriella zofingiensis]
 gi|261362650|gb|ACX71634.1| biotin carboxylase [Muriella zofingiensis]
          Length = 490

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 37/211 (17%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K  VP   G   +I     A +  KT+  P  ++K+    GGRG     +    
Sbjct: 152 ARDTMKKAGVPTVPGSEGLIRDDEEANAVAKTIGFP-LMIKATAGGGGRGMRLATKQED- 209

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                   + LK    +     G+                VY+E      R +   +L D
Sbjct: 210 ------FLTMLKQAQQEAEAAFGNG--------------AVYIERYVQNPRHIEFQVLAD 249

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           +       +   +    I+   +   ++     + P +     +   +    +   G   
Sbjct: 250 KYGN---VVHLGERDCSIQRRNQKLLEEAPSPALTPEVRKAMGDAAVNAARAIGYVGVGT 306

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           I+           + +K    +E+N  I ++
Sbjct: 307 IEF---------LWEEKGFYFMEMNTRIQVE 328


>gi|225027684|ref|ZP_03716876.1| hypothetical protein EUBHAL_01943 [Eubacterium hallii DSM 3353]
 gi|224954998|gb|EEG36207.1| hypothetical protein EUBHAL_01943 [Eubacterium hallii DSM 3353]
          Length = 425

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 24/116 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A+     S   A  A         V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAEYENFDS-DEAALAYLETAKFPIVLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV + ++L+     ++ I+        G+ ++ ++   TG  V+ +   DG  I 
Sbjct: 152 -GVLICNTLEEAKDGVKTIMEDKKFGDAGNRMVIEEFM-TGREVSVLAFCDGKTIK 205


>gi|153004934|ref|YP_001379259.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152028507|gb|ABS26275.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 1083

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 51/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA + +  V + K    +S   A +  + +  P+ +             R         G
Sbjct: 133 KAAMERVGVELPKSGYATSWEEARAIAEDIGFPIII-------------RPSFTMGGEGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    + +      R  L  +             + +  E+     +E  L ++ DR +
Sbjct: 180 GV--AYNREEFEPLARRALTLS-----------PTHTILCEESIIGWKEYELEVMRDR-N 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S      IE            + + P   +T ++   + D 
Sbjct: 226 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTDKEYQRMRDA 267


>gi|33596788|ref|NP_884431.1| biotin carboxylase [Bordetella parapertussis 12822]
 gi|33573489|emb|CAE37475.1| biotin carboxylase [Bordetella parapertussis]
          Length = 456

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+ + ++  VP+  G    +S V  A    + +  PL V K+     GRG    +    
Sbjct: 119 QARKIAKEAGVPIVPGAPEPVSDVEEAIKVAREVGYPLLV-KAAAGGDGRGMRVIQGEAQ 177

Query: 65  DSKGGVRVESSLKSV 79
             +G  R     KS 
Sbjct: 178 LREGLERASMEAKSA 192


>gi|332085406|gb|EGI90576.1| phosphoribosylamine--glycine ligase [Shigella dysenteriae 155-74]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|329765683|ref|ZP_08257252.1| lysine biosynthesis enzyme LysX [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137749|gb|EGG42016.1| lysine biosynthesis enzyme LysX [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 251

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           LL+K+ VP     V  S  AA   ++T   P  V+K  + + GR
Sbjct: 64  LLKKFGVPTPYAAVAFSRDAAIEHLETHGYPK-VIKPTVGSWGR 106


>gi|310766095|gb|ADP11045.1| Phosphoribosylamine-glycine ligase [Erwinia sp. Ejp617]
          Length = 426

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYVRKKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|293604473|ref|ZP_06686878.1| phosphoribosylamine-glycine ligase [Achromobacter piechaudii ATCC
           43553]
 gi|292817054|gb|EFF76130.1| phosphoribosylamine-glycine ligase [Achromobacter piechaudii ATCC
           43553]
          Length = 435

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++N+P A+    +    A + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMVRHNIPTARYATFTDPVQAHAYIDQEGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADI 114
            GV V ++L+   + +  +LG        G  G+RV    C+  E+ + I
Sbjct: 152 -GVVVAATLEEAHAAVDAMLG----DGSMGAAGARVVIEECLVGEEASFI 196


>gi|218885920|ref|YP_002435241.1| Biotin carboxylase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756874|gb|ACL07773.1| Biotin carboxylase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 472

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 89/299 (29%), Gaps = 39/299 (13%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K L R   VP   G    I     AE   ++L         Q   G R      +  A  
Sbjct: 125 KRLARSLGVPTVPGSDRPIYDEMEAEKVAQSLFEF------QEQQGIRKPLVLVKASAGG 178

Query: 67  KG-GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G G+     +    S  R I    L  +Q    G     V +E        L + ++ D
Sbjct: 179 GGMGIEEVYDIDLFRSVYRRIRNYAL--RQFKDEG-----VLIEQRIRDFNHLEVQVVSD 231

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ--GQA 183
           R+        +      I+        +I     DP       D A +   +       A
Sbjct: 232 RSGRNPVHFGTR--NCSIQSTGLQKRIEIAP-GFDPSSIEYGFDAAQVLRDITQHSLAMA 288

Query: 184 RIDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI----SFDDNALYRHLD 238
           R  G D      +    D    L+E+N  I ++NG +    +++      D  A    + 
Sbjct: 289 RKVGYDNVGTWEWIVTRDGRPFLMEVNTRIQVENG-VSATIARVRGQKGVDLIAEQIRIG 347

Query: 239 IQELRDVSEED--------SREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           + E     +ED           + A+  +  +    G +    +G G        +  +
Sbjct: 348 LGEPLGYGQEDVTFEGVGIEYRLIAEDPDNRFTPWVGRV----DGFGWPERPWLAMHTH 402


>gi|218690701|ref|YP_002398913.1| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli ED1a]
 gi|218428265|emb|CAR09184.2| fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding
           subunit [Escherichia coli ED1a]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVA 171
            + ++          +   +GG++        P+    + + PL       + +      
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKSK 637

Query: 172 SLCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     L+         L   +     D  ++  L+I+PL+   +     LD  +  
Sbjct: 638 KIRARSALRLLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGS-EFTALDVTLDI 694


>gi|108758762|ref|YP_633734.1| acetyl-CoA carboxylase biotin carboxylase subunit [Myxococcus
           xanthus DK 1622]
 gi|108462642|gb|ABF87827.1| acetyl-CoA carboxylase, biotin carboxylase [Myxococcus xanthus DK
           1622]
          Length = 450

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 94/336 (27%), Gaps = 46/336 (13%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+ L+    VPV  G   V+  V +A +  + +  P+ V  +                 
Sbjct: 118 QARKLVSAAGVPVVPGSEGVVPDVASALAEAERIGYPVLVKAA---------------SG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+ V  +   +    R+           G  G     VYVE      R + + +L 
Sbjct: 163 GGGIGMAVARNAAEMEKVYRQCTDR--AKAAFGKEG-----VYVERYFPAPRHIEVQILG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D+       I   +    I+   +   ++   +L     G   E    L        +A 
Sbjct: 216 DQHGH---LIHCLERECSIQRRHQKVVEEAPSVLF--ADGRNPELAQKLFTAAVAAAKAF 270

Query: 185 IDG-GDLFPNLYK----AFCDKDMSLLEINPLIIMKNG-------RLRVLDSKISFDDNA 232
                     LY      F + +  L   +P+  +  G              +++     
Sbjct: 271 GYANAGTVEFLYSDGEVYFIEMNARLQVEHPVTELTTGLDLIGWQLRIAAGERLTVKQED 330

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
           + R     E R  +E+  +   +      +    G    +  G G               
Sbjct: 331 VKRRGAALEFRIYAEDPVKFFPSPGPLKVFQPPTGEGVRLDAGYGEGNTVTP-----NYD 385

Query: 293 PANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
           P     +  G  + +             ++GI  NI
Sbjct: 386 PMIAKLIVTGETRAQAIERSVTALQSFRIEGIKTNI 421


>gi|37681327|ref|NP_935936.1| phosphoribosylamine--glycine ligase [Vibrio vulnificus YJ016]
 gi|37200078|dbj|BAC95907.1| phosphoribosylamine-glycine ligase [Vibrio vulnificus YJ016]
          Length = 444

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 124 KDFLARHQIPTAAYANFTDIEPALAYVREQGAPI-VVKADGLAAGK-------------- 168

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 169 GVIVAMTLEEAEEAIKDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGEN 220

Query: 129 GMVA 132
            +  
Sbjct: 221 VLPM 224


>gi|148549900|ref|YP_001270002.1| phosphoribosylamine--glycine ligase [Pseudomonas putida F1]
 gi|148513958|gb|ABQ80818.1| phosphoribosylamine--glycine ligase [Pseudomonas putida F1]
          Length = 430

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLQEKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLEEAEAAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|327401215|ref|YP_004342054.1| phosphoribosylamine/glycine ligase [Archaeoglobus veneficus SNP6]
 gi|327316723|gb|AEA47339.1| phosphoribosylamine/glycine ligase [Archaeoglobus veneficus SNP6]
          Length = 478

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 18/105 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +  VP+           A   +K             +A GRG    K     +  
Sbjct: 116 KDFLDRIGVPIPGYRNFDDPEDAREYVKEY-----------YAEGRGNLVVKADGLAAGK 164

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV V +S    +  I +I    ++ ++ G  G+R+    +E+   
Sbjct: 165 GVYVCNSADEALQAIDDI----MVKRKFGDAGNRIE---IEERLY 202


>gi|320179531|gb|EFW54482.1| Phosphoribosylamine--glycine ligase [Shigella boydii ATCC 9905]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|298507094|gb|ADI85817.1| D-alanine--D-alanine ligase [Geobacter sulfurreducens KN400]
          Length = 316

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 37/127 (29%), Gaps = 29/127 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +     + VA   V+    A +   +    P+ V  SQ                 S 
Sbjct: 106 AKEVFAARGLTVAPYRVVRRGEAVDPVAEGFGYPVVVKPSQ---------------EGSS 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +         L   L T         V            RE+ + +L DR 
Sbjct: 151 VGVSIVKSPEE--------LPYALETAFRYDDDILVERFI------KGREIQIGILDDRA 196

Query: 128 SGMVAFI 134
            G +  +
Sbjct: 197 MGAIEIV 203


>gi|269796782|ref|YP_003316237.1| phosphoribosylamine--glycine ligase [Sanguibacter keddieii DSM
           10542]
 gi|269098967|gb|ACZ23403.1| phosphoribosylamine--glycine ligase [Sanguibacter keddieii DSM
           10542]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 6/114 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   +VP A   V S+V     A+     P +VVK    A G+G     +     +
Sbjct: 109 AKDVMAAADVPTAMARVCSTVDQVGDALDAFG-PPFVVKDDGLAAGKGVVVTTDRLEALR 167

Query: 68  GGVRVESSLK---SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                 ++          I E L    ++      G  V  V +    D  R  
Sbjct: 168 HAQECFANPDRGGDPRVVIEEFLDGPEVSLFCISDGETV--VPLAPAQDFKRAF 219


>gi|125718001|ref|YP_001035134.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK36]
 gi|125497918|gb|ABN44584.1| Carbamoylphosphate synthase large subunit / biotin carboxylase,
           putative [Streptococcus sanguinis SK36]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|23573423|gb|AAN38710.1| putative acetyl/propionyl carboxylase alpha subunit [Mycobacterium
           abscessus]
          Length = 351

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 17/79 (21%)

Query: 7   QAKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK  +    VPV  G   +  S          +  P+ V K+    GGR          
Sbjct: 120 QAKKTMSDAGVPVLPGGDTTGLSAEQLAKLAADVGYPVLV-KASAGGGGR---------- 168

Query: 65  DSKGGVRVESSLKSVISDI 83
               G+R+ +S   +   +
Sbjct: 169 ----GMRIVASPDELDEAV 183


>gi|29346114|ref|NP_809617.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253568464|ref|ZP_04845875.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           1_1_6]
 gi|81587111|sp|Q8A9W1|PURT_BACTN RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|29338008|gb|AAO75811.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251842537|gb|EES70617.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           1_1_6]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 46/155 (29%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  A      ++   + A   +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTANYFYAKTLDELKEAAAKIGFPC-VVKPLMSSSGKGQSL--------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V+    L+                  +G  G  +  + +E+      E  ++LL    
Sbjct: 157 --VKSADELEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|22124825|ref|NP_668248.1| hypothetical protein y0917 [Yersinia pestis KIM 10]
 gi|45440510|ref|NP_992049.1| Acyl-CoA synthetase (NDP forming) [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108808754|ref|YP_652670.1| putative acetyltransferase [Yersinia pestis Antiqua]
 gi|108810989|ref|YP_646756.1| acetyltransferase [Yersinia pestis Nepal516]
 gi|145600167|ref|YP_001164243.1| acetyltransferase [Yersinia pestis Pestoides F]
 gi|153947999|ref|YP_001402166.1| acyl-CoA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162419869|ref|YP_001607800.1| putative acyl-CoA synthetase [Yersinia pestis Angola]
 gi|166212989|ref|ZP_02239024.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399349|ref|ZP_02304873.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167423733|ref|ZP_02315486.1| putative acyl-CoA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229896378|ref|ZP_04511547.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis Pestoides A]
 gi|229901207|ref|ZP_04516329.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis Nepal516]
 gi|21957653|gb|AAM84499.1|AE013695_1 hypothetical protein y0917 [Yersinia pestis KIM 10]
 gi|45435367|gb|AAS60926.1| Acyl-CoA synthetase (NDP forming) [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108774637|gb|ABG17156.1| acetyltransferase [Yersinia pestis Nepal516]
 gi|108780667|gb|ABG14725.1| putative acetyltransferase [Yersinia pestis Antiqua]
 gi|145211863|gb|ABP41270.1| acetyltransferase [Yersinia pestis Pestoides F]
 gi|152959494|gb|ABS46955.1| putative acyl-CoA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162352684|gb|ABX86632.1| putative acyl-CoA synthetase [Yersinia pestis Angola]
 gi|166205776|gb|EDR50256.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167051853|gb|EDR63261.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057903|gb|EDR67649.1| putative acyl-CoA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229681136|gb|EEO77230.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis Nepal516]
 gi|229700654|gb|EEO88684.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis Pestoides A]
 gi|320016463|gb|ADW00035.1| putative acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++ ++     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMVLARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|332083897|gb|EGI89110.1| phosphoribosylamine--glycine ligase [Shigella boydii 5216-82]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|328946308|gb|EGG40452.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK1087]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|327470035|gb|EGF15499.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK330]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|324992901|gb|EGC24821.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK405]
 gi|324994462|gb|EGC26375.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK678]
 gi|327462207|gb|EGF08534.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK1]
 gi|327489694|gb|EGF21485.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK1058]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|322372453|ref|ZP_08046989.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           C150]
 gi|321277495|gb|EFX54564.1| carbamoyl-phosphate synthase, large subunit [Streptococcus sp.
           C150]
          Length = 1059

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  +     N+P   G   ++   A  A + +  P+ V  S +  G
Sbjct: 667 RDLFEQALIDLNIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+   + P+ +  ++++V  A +    +  P+ V  +    G                
Sbjct: 133 KQLMEDLHQPIPESEIVNTVEEAVAFASKIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|319942479|ref|ZP_08016790.1| PurD protein [Sutterella wadsworthensis 3_1_45B]
 gi|319803952|gb|EFW00868.1| PurD protein [Sutterella wadsworthensis 3_1_45B]
          Length = 426

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++++P A     +   AA + ++    P+ VVK+   A G+             
Sbjct: 106 AKAFMKRHHIPTADYETFTDPAAARAYVEKKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +++  +S I  +L       Q G  G+RV
Sbjct: 152 -GVVVAMTVEEAVSAIDSMLE----GHQFGAAGARV 182


>gi|314962836|gb|EFT06936.1| carbamoyl-phosphate synthase, large subunit [Propionibacterium
           acnes HL082PA1]
          Length = 1068

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 673 LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 719 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 764



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV    V+ +V  A     T+  PL V  +    G  G     E       
Sbjct: 133 KQLMDELGQPVPASEVVHTVDEAVKVGNTIGYPLIVRPAYTLGGTGGGMCCDEAELVRIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG 100
           G  +E S  +     + I G   I  +    G
Sbjct: 193 GKGLELSPVTECLIEQSIAGFKEIEYEMMRDG 224


>gi|295094991|emb|CBK84082.1| phosphoribosylamine--glycine ligase [Coprococcus sp. ART55/1]
          Length = 423

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 24/116 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A     +   +A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYENFTDADSALKYLETATFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV + + L+   + ++EI+        G+T++ ++   TG  V+ +   DG  I 
Sbjct: 152 -GVLICNDLEEAKAGVKEIMLDKHFGSAGNTMVIEEFM-TGREVSVLCFCDGTTIK 205


>gi|156977002|ref|YP_001447908.1| hypothetical protein VIBHAR_05787 [Vibrio harveyi ATCC BAA-1116]
 gi|156528596|gb|ABU73681.1| hypothetical protein VIBHAR_05787 [Vibrio harveyi ATCC BAA-1116]
          Length = 877

 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 77/232 (33%), Gaps = 30/232 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q+  L  ++   +    + S V  A    + +  P+ V         + +       +D
Sbjct: 480 HQSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAV---------KLRSPDIPHKSD 530

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G      + + V S  + IL +  L        G  V  +          EL +S+ V
Sbjct: 531 VHGVALNLRNSQEVSSAAQAILDTAKLSYPAANLQGLLVQGM---AKLGSAEELRVSIAV 587

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA- 183
           D+  G V  +   QGG D           +  L   PL    +  +  +   L       
Sbjct: 588 DKVFGPVILLG--QGGSDWN----ITQDAVAALP--PLNMNLARYLIVIALKLGKVRLQK 639

Query: 184 ------RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                   +       + +   +  ++  L+I+P ++  +  L ++D+ ++ 
Sbjct: 640 HKDALDITELSKFLVRISQMAVELPEIERLDIHPALVSGS-DLTIIDADVTL 690


>gi|332361202|gb|EGJ39006.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK1056]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|326796329|ref|YP_004314149.1| phosphoribosylamine--glycine ligase [Marinomonas mediterranea
           MMB-1]
 gi|326547093|gb|ADZ92313.1| Phosphoribosylamine--glycine ligase [Marinomonas mediterranea
           MMB-1]
          Length = 428

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + IK    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYGNFTEIAPAVAYIKEKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +    I  + ++L       Q    G   + V VE+   +  E    ++VD  +
Sbjct: 154 GVILAQTEAEAIEAVEDML-------QGNAFGDAGHRVVVEEFL-VGEEASFIVIVDGET 205

Query: 129 GMVAFIASTQG 139
            +   +AS+Q 
Sbjct: 206 VLP--MASSQD 214


>gi|325687460|gb|EGD29481.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK72]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|302525554|ref|ZP_07277896.1| acetyl-CoA synthetase [Streptomyces sp. AA4]
 gi|302434449|gb|EFL06265.1| acetyl-CoA synthetase [Streptomyces sp. AA4]
          Length = 947

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 23/65 (35%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y V V    V S+   A +A   L  P+ +        GR       L   S+  
Sbjct: 729 RLLSCYGVDVVPFRVASNEDQAVAAAVELGFPVTLKAVDERLRGRPDFAGVRLDLASEES 788

Query: 70  VRVES 74
           VRV  
Sbjct: 789 VRVAY 793


>gi|139439445|ref|ZP_01772886.1| Hypothetical protein COLAER_01906 [Collinsella aerofaciens ATCC
           25986]
 gi|133775224|gb|EBA39044.1| Hypothetical protein COLAER_01906 [Collinsella aerofaciens ATCC
           25986]
          Length = 329

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 24/125 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ +  +P A      +  A+  A     G   VVK+   A G+             
Sbjct: 8   SKQLMERAGIPTAAYG-SFTDEASALAYVREQGAPLVVKADGLAAGK------------- 53

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V + L+     +RE  G T      G  G   N V +E+   +  E  L    D  
Sbjct: 54  -GVIVATELEQAEEAVRECFGGTF-----GDAG---NTVVIEEML-VGPECSLLAFTDGK 103

Query: 128 SGMVA 132
           +    
Sbjct: 104 TVRPM 108


>gi|327440868|dbj|BAK17233.1| gamma-glutamylcysteine synthetase [Solibacillus silvestris StLB046]
          Length = 755

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           K +L+++   V KG    ++  A  A        +VVK +    G G   FKE   
Sbjct: 491 KKILQQHGFRVPKGEEFHTIEQALRAYDLFSTKPFVVKPKTTNYGLGISIFKEGAN 546


>gi|325689705|gb|EGD31709.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK115]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|315178406|gb|ADT85320.1| phosphoribosylamine--glycine ligase [Vibrio furnissii NCTC 11218]
          Length = 430

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVRKQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|221111546|ref|XP_002158180.1| PREDICTED: similar to phosphoribosylglycinamide formyltransferase,
           partial [Hydra magnipapillata]
          Length = 296

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K+ + ++ +P  +    ++V  A + I        V+K+   A G+             
Sbjct: 110 SKSFMDRHGIPTPRWKSFTNVSEASNYINLNCPDEIVIKASGLASGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV + SS    +  ++++L      K+ G  G     + +E+  
Sbjct: 157 -GVVLTSSKNDAVETVKQMLEH----KKFGDAG---TTILIEEKI 193


>gi|157143812|emb|CAL47319.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 97

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 11/89 (12%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIITS------DSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIEDLANYGEYSGGPTTGETRFYAETLLDLMTREPDAKG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVK 347
           +G ++ I G I     + K   GI+ A +
Sbjct: 61  RGKVMIIGGAIANFTDVAKTFTGIIQAFE 89


>gi|15922639|ref|NP_378308.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus tokodaii
           str. 7]
 gi|15623429|dbj|BAB67417.1| 400aa long hypothetical phosphoribosylglycinamide formyltransferase
           [Sulfolobus tokodaii str. 7]
          Length = 400

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 26/115 (22%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            K  VP  +     +    +   K +  P  ++K ++ + G G                V
Sbjct: 125 EKVKVPTTQYGFAENPEEVKKICKDIGYPC-IIKPEMSSSGHGH--------------EV 169

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +   V    +E +     T   G +      V VE+   I RE  L++L  R 
Sbjct: 170 VYNESEVEQKFKEAI-----THARGKS----EQVIVEEYVKIDRE--LTVLTYRY 213


>gi|152976247|ref|YP_001375764.1| carbamoyl phosphate synthase large subunit [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189081825|sp|A7GRL1|CARB_BACCN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|152024999|gb|ABS22769.1| carbamoyl-phosphate synthase, large subunit [Bacillus cytotoxicus
           NVH 391-98]
          Length = 1072

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 674 LTELGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|312136530|ref|YP_004003867.1| carbamoyl-phosphate synthase large subunit [Methanothermus fervidus
           DSM 2088]
 gi|311224249|gb|ADP77105.1| carbamoyl-phosphate synthase large subunit [Methanothermus fervidus
           DSM 2088]
          Length = 1066

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 40/184 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++K   PV K   ++SV  A  A++ +  P+ V  +    G             + GGV 
Sbjct: 134 MKKIGEPVPKYRAVNSVEEAFEAVEEIGFPVIVRPAYTLGG-------------TGGGV- 179

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + K +   +   L  +L           VN V ++      +E    ++ DR    +
Sbjct: 180 -AKNKKELEEVVSHGLKMSL-----------VNQVLIDQSVIGWKEFEYEVMRDRKGTCI 227

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E V          +++ P   ++ ED          + D L ++G   
Sbjct: 228 TV-------CNMENVDPMGIHTGESIVVAPAQTLSDEDNQKLRSAALKIIDALGIEGGCN 280

Query: 185 IDGG 188
           I   
Sbjct: 281 IQFA 284


>gi|297243178|ref|ZP_06927115.1| formate-dependent phosphoribosylglycinamide formyltransferase (GAR
           transformylase) [Gardnerella vaginalis AMD]
 gi|296888827|gb|EFH27562.1| formate-dependent phosphoribosylglycinamide formyltransferase (GAR
           transformylase) [Gardnerella vaginalis AMD]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 53/182 (29%), Gaps = 31/182 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P       SS    E   K +  P  VVK  + + G G+             VR   +
Sbjct: 133 GLPTTPYCFASSYEELEDGAKKVGYPC-VVKPVMSSSGHGQS-----------IVRSSEN 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGS--RVNCVYVEDGADILRELY-LSLLVDRTSGMVA 132
           L +  ++ +          +    G     + V VE  A +  EL  L++          
Sbjct: 181 LLAAWNEAQH--------GRRAAAGHENECSRVIVEALAPLDYELTVLTISSCAGITTCE 232

Query: 133 FIASTQGGMDIEEVA--KDYPQKIFKLLIDPL----IGVTSEDVASLCDMLELQGQARID 186
            IA  Q   D  E     + P+ I     D       G+T  D+A               
Sbjct: 233 PIAQRQQDGDYRESWQPANIPESIRTNAKDIAKRAVEGLT--DIAQEAGEAGWGVYGVEL 290

Query: 187 GG 188
             
Sbjct: 291 FV 292


>gi|264679033|ref|YP_003278940.1| phosphoribosylamine--glycine ligase [Comamonas testosteroni CNB-2]
 gi|299530003|ref|ZP_07043430.1| phosphoribosylamine--glycine ligase [Comamonas testosteroni S44]
 gi|262209546|gb|ACY33644.1| phosphoribosylamine--glycine ligase [Comamonas testosteroni CNB-2]
 gi|298721983|gb|EFI62913.1| phosphoribosylamine--glycine ligase [Comamonas testosteroni S44]
          Length = 430

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 19/121 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++++P A+    +   AA + +  L  P+ V+K+   A G+             
Sbjct: 107 SKDFMARHSIPTAQYETFTDPVAAHAYVDRLGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+     +  +L       Q    G+RV    +E+  D   E    +L D  
Sbjct: 153 -GVVVAMSLQEAHDAVDFMLVDNKYGVQHNEGGARV---VIEEFLD-GEEASFIVLCDGK 207

Query: 128 S 128
           +
Sbjct: 208 N 208


>gi|34557284|ref|NP_907099.1| phosphoribosylamine--glycine ligase [Wolinella succinogenes DSM
           1740]
 gi|34483000|emb|CAE09999.1| PHOSPHORIBOSYLAMINE-GLYCINE LIGASE [Wolinella succinogenes]
          Length = 419

 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K    + ++P A+ +   S   A + I++L  P  VVK+     G+              
Sbjct: 105 KQFAARNSLPTARFLETESEEEARAFIQSL-TPPVVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +  I  + E+L      +  G  G     V +E+  D
Sbjct: 150 GVIIAQSHQEAIEAVLEML----SGEGFGEAGK---KVVIEEFLD 187


>gi|331649859|ref|ZP_08350937.1| phosphoribosylamine--glycine ligase [Escherichia coli M605]
 gi|331041325|gb|EGI13477.1| phosphoribosylamine--glycine ligase [Escherichia coli M605]
          Length = 433

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 158 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|297562237|ref|YP_003681211.1| CoA-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296846685|gb|ADH68705.1| CoA-binding domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 976

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGG-RGKGRFKELPAD 65
            A+ LL  Y +     + ++S   A  A   L  P  VVK+       R  G F      
Sbjct: 750 DARDLLACYGIAAYPDIPVTSEEEAVVAAGQLGYP-AVVKADSPDLRLRAGGTFVRADLR 808

Query: 66  SKGGVRVESSL------KSVISDIREI 86
           +   VR   +             ++ +
Sbjct: 809 TPDDVRSAFAALHDRFGDEASLVVQRM 835


>gi|237732570|ref|ZP_04563051.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908109|gb|EEH94027.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 886

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 75/237 (31%), Gaps = 32/237 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTATEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P+    + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEDQAVVALPPLNMNLARYLVIQGIKNKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +     L+         L   +     D  ++  L+I+PL+    G    LD  +  
Sbjct: 639 IRARSALRPLDIAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASA-GEFTALDVTLDI 694


>gi|220909806|ref|YP_002485117.1| glutathione synthase [Cyanothece sp. PCC 7425]
 gi|219866417|gb|ACL46756.1| Glutathione synthase [Cyanothece sp. PCC 7425]
          Length = 637

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 11/79 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA L+    PV KG ++  +  A +  + +  P+ V           K            
Sbjct: 222 KAFLKTLGFPVPKGEIVQRLSEAMAVAEKIGYPVAV-----------KPVVGHKGMGVTA 270

Query: 69  GVRVESSLKSVISDIREIL 87
            V+   +L+       E +
Sbjct: 271 DVQNMDALERAYEQAVEAI 289


>gi|172045872|sp|Q96Y60|PURT_SULTO RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
          Length = 397

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 26/115 (22%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            K  VP  +     +    +   K +  P  ++K ++ + G G                V
Sbjct: 122 EKVKVPTTQYGFAENPEEVKKICKDIGYPC-IIKPEMSSSGHGH--------------EV 166

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +   V    +E +     T   G +      V VE+   I RE  L++L  R 
Sbjct: 167 VYNESEVEQKFKEAI-----THARGKS----EQVIVEEYVKIDRE--LTVLTYRY 210


>gi|197122234|ref|YP_002134185.1| phosphoribosylglycinamide formyltransferase 2 [Anaeromyxobacter sp.
           K]
 gi|196172083|gb|ACG73056.1| phosphoribosylglycinamide formyltransferase 2 [Anaeromyxobacter sp.
           K]
          Length = 387

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 26/141 (18%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           R+  V  A+    S+  A  +A++ +  P  VVK  + + G+G+             VR 
Sbjct: 113 RELGVATARYAYASTPEAFRTAVREIGLPC-VVKPLMSSSGKGQSV-----------VRA 160

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E  L++  S              +G  G     V VE+      E+ L  +  R    + 
Sbjct: 161 EGDLEAAWSYA-----------MSGTRGDL-REVIVEEFIPFESEITLLTVTQRRGETLF 208

Query: 133 F--IASTQGGMDIEEVAKDYP 151
              I   Q   D +E  + +P
Sbjct: 209 CPPIGHRQERGDYQESWQPHP 229


>gi|157143816|emb|CAL47321.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 96

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 270 GCMVNGAGLAMATMDIIKLYG---GAPANFLDVGGGADQDKVAAAFKIIT------SDSS 320
             MV G G ++   D I          AN+ +  GG   D+     + +        D  
Sbjct: 1   WTMVAGGGASVVYADTIADLASGVEDLANYGEYSGGPTTDETRFYTETVLDLMTREKDEK 60

Query: 321 VKGILINIFGGIMRCDVLVK---GILSAVKE 348
            +  ++ I G I     + K   GI+ A ++
Sbjct: 61  GRDKILIIGGAIANFTDVAKTFTGIIQAFEK 91


>gi|145638292|ref|ZP_01793902.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae PittII]
 gi|145272621|gb|EDK12528.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae PittII]
 gi|309751444|gb|ADO81428.1| Phosphoribosylamine-glycine ligase [Haemophilus influenzae R2866]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|327474227|gb|EGF19634.1| carbamoylphosphate synthase large subunit / biotin carboxylase
           [Streptococcus sanguinis SK408]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K L +K  VPV  G ++++   A+ A+K L  P
Sbjct: 117 KKLFKKAGVPVVPGQIVNTEAGADLAVKKLGLP 149


>gi|315612904|ref|ZP_07887815.1| carbamoylphosphate synthase large subunit [Streptococcus sanguinis
           ATCC 49296]
 gi|315315014|gb|EFU63055.1| carbamoylphosphate synthase large subunit [Streptococcus sanguinis
           ATCC 49296]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+  +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIHTEADVDKAVNEIGLPM 150


>gi|302530850|ref|ZP_07283192.1| predicted protein [Streptomyces sp. AA4]
 gi|302439745|gb|EFL11561.1| predicted protein [Streptomyces sp. AA4]
          Length = 439

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 9/125 (7%)

Query: 8   AKALLRK----YNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKE 61
           +K++ R        P+ +G V +   AAE  +  L   G   +VK   H GG G      
Sbjct: 150 SKSVFRALAGGTGCPIPEGRVTADPAAAEEWLWELLSSGRCAIVKQDQHVGGYGNEILSP 209

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
               +  G     ++      +R ++               V   YV D   +  E  +S
Sbjct: 210 HDGVTPIGAAEVITVPD-REALRALVRRRWPWYSGDGRRRVVVEHYVPDCTPVYVE--MS 266

Query: 122 LLVDR 126
           +  D 
Sbjct: 267 ITDDG 271


>gi|291560089|emb|CBL38889.1| carbamoyl-phosphate synthase large subunit [butyrate-producing
           bacterium SSC/2]
          Length = 1077

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R+      +P+ +  + ++V  A      +  P+ V  S +  GGRG
Sbjct: 668 RDLFREMMDKLEIPMPESGMATTVEEALEIAGKIGYPVMVRPSYVL-GGRG 717


>gi|242241104|ref|YP_002989285.1| phosphoribosylamine--glycine ligase [Dickeya dadantii Ech703]
 gi|242133161|gb|ACS87463.1| phosphoribosylamine/glycine ligase [Dickeya dadantii Ech703]
          Length = 428

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + I+    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYIRRKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   +   ++L         G  G     + VE+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAENAATDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|229162822|ref|ZP_04290779.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus R309803]
 gi|228620704|gb|EEK77573.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus R309803]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|313124959|ref|YP_004035223.1| l-2-aminoadipate n-acetyltransferase [Halogeometricum borinquense
           DSM 11551]
 gi|312291324|gb|ADQ65784.1| L-2-aminoadipate N-acetyltransferase [Halogeometricum borinquense
           DSM 11551]
          Length = 291

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 17/108 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP     V  +  +A  +IK    P  VVK  + + GR   +             
Sbjct: 97  LEQAGVPTPNTEVAFTTDSAMKSIKKFGYPC-VVKPVVGSWGRLMAKIDS---------- 145

Query: 72  VESSLKSVISDIREILG----STLITKQTGPTGSRVNCVYVEDGADIL 115
              +    I + +  LG         ++      R   V   DG  I 
Sbjct: 146 --PAAAEAILEHKATLGHYQHKVFYVQEFVKKPGRDIRVLAVDGEPIA 191


>gi|193084131|gb|ACF09797.1| carbamoyl-phosphate synthase large chain [uncultured marine group III
            euryarchaeote SAT1000-53-B3]
          Length = 1062

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 128/387 (33%), Gaps = 69/387 (17%)

Query: 10   ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
             L+RK  + + K  +  S     +  + +  P+ V  S +  G                G
Sbjct: 673  ELMRKAGIKMPKWAIAKSSDEVITRAEEIGFPVLVRPSFVLGG---------------RG 717

Query: 70   VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
            + +  + K +   +R      L +  T         V V+   +   EL + L+ D    
Sbjct: 718  MEIVHNDKQLKKYLR------LESHATPK-----RPVLVDKFLEGAIELDVDLISDGKK- 765

Query: 130  MVAFIASTQGGMDIEEVAKDY------PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
                I +    +++  V          PQ I K L D +I ++      +   +++ G A
Sbjct: 766  --VVIGAIMEQIEMAGVHSGDSACVMPPQSISKKLEDEVIKIS----KKVAKKMKIIGAA 819

Query: 184  RIDGGDLFPNLYKAFCDKDMSLLEIN-------PLIIMKNGRLRVLDSKISFDDNALYRH 236
             +           A  D ++ LLEIN       P +    G      +  +     L + 
Sbjct: 820  NLQL---------AIKDSNVFLLEINPRASRTLPFVSKSTGYPLARLAVRAMLGQKLNQL 870

Query: 237  LDIQELRDVSEEDSREIEAKQHNLSYI---ALDGNIGCMVNGAGLAMATMDIIKLYGGAP 293
             ++ +++ VS +       K   L  +    +      M +G     A +  +K  GG  
Sbjct: 871  PELIKMKGVSVKVPTFSWLKITGLDTVLGPEMKSTGEAMGHGPTFGTAYLKAMK--GG-- 926

Query: 294  ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINI 353
             N      G     V+   K+   D + + I +    G        KG  + ++   I+ 
Sbjct: 927  -NKTIPTTGTVFLSVSNKLKLEFGDVAQELIDL----GFNLIAT--KGTAAHLRRKGIDS 979

Query: 354  PLVMRLEGANVDIGNRLIAESGLNVIT 380
             ++ R+          ++    +++I 
Sbjct: 980  KVIWRISDRKQPDILSIMRNQKVDLII 1006


>gi|218899040|ref|YP_002447451.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus G9842]
 gi|226700919|sp|B7IUP6|CARB_BACC2 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|218541911|gb|ACK94305.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus G9842]
          Length = 1072

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 678 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 714


>gi|167766145|ref|ZP_02438198.1| hypothetical protein CLOSS21_00639 [Clostridium sp. SS2/1]
 gi|167712225|gb|EDS22804.1| hypothetical protein CLOSS21_00639 [Clostridium sp. SS2/1]
          Length = 1077

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R+      +P+ +  + ++V  A      +  P+ V  S +  GGRG
Sbjct: 668 RDLFREMMDKLEIPMPESGMATTVEEALEIAGKIGYPVMVRPSYVL-GGRG 717


>gi|317497966|ref|ZP_07956271.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894719|gb|EFV16896.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 1077

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R+      +P+ +  + ++V  A      +  P+ V  S +  GGRG
Sbjct: 668 RDLFREMMDKLEIPMPESGMATTVEEALEIAGKIGYPVMVRPSYVL-GGRG 717


>gi|281181069|dbj|BAI57399.1| phosphoribosylglycinamide synthetase [Escherichia coli SE15]
 gi|330908321|gb|EGH36840.1| phosphoribosylamine--glycine ligase [Escherichia coli AA86]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|222616781|gb|EEE52913.1| hypothetical protein OsJ_35522 [Oryza sativa Japonica Group]
          Length = 385

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY++P AK    +    A+  ++    P+ VVK+   A G+              
Sbjct: 59  KKLCDKYHIPTAKYQSFTDPSDAKKYVEEQGAPI-VVKADGLAAGK-------------- 103

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I  +L    +    G  G   + V VE+  +   E+    LVD  +
Sbjct: 104 GVVVAMTLEKAFEAIDSML----VEGSFGSAG---SRVIVEEYLE-GEEVSFFALVDGET 155

Query: 129 GMVA 132
            +  
Sbjct: 156 ALPL 159


>gi|153832786|ref|ZP_01985453.1| acyl-CoA synthetase [Vibrio harveyi HY01]
 gi|148870920|gb|EDL69810.1| acyl-CoA synthetase [Vibrio harveyi HY01]
          Length = 877

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q+  L  ++   +    + S V  A    + +  P+ V         + +       +D
Sbjct: 480 HQSSPLFEQFGFHILPTWIASEVTEAVHMAENIGYPVAV---------KLRSPDIPHKSD 530

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G      + + V S  + IL +  L        G  V  +          EL +S+ V
Sbjct: 531 VHGVALNLRNSQEVSSAAQAILDTAKLSYPAANLQGLLVQGM---AKLGSAEELRVSIAV 587

Query: 125 DRTSGMVAFIASTQGGMDIE 144
           D+  G V  +   QGG D  
Sbjct: 588 DKVFGPVILLG--QGGSDWN 605


>gi|149364887|ref|ZP_01886922.1| putative acetyltransferase [Yersinia pestis CA88-4125]
 gi|165926586|ref|ZP_02222418.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165935875|ref|ZP_02224445.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011098|ref|ZP_02231996.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167421478|ref|ZP_02313231.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167469726|ref|ZP_02334430.1| putative acetyltransferase [Yersinia pestis FV-1]
 gi|218930297|ref|YP_002348172.1| putative acetyltransferase [Yersinia pestis CO92]
 gi|229838885|ref|ZP_04459044.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229899454|ref|ZP_04514597.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|294504986|ref|YP_003569048.1| putative acetyltransferase [Yersinia pestis Z176003]
 gi|115348908|emb|CAL21865.1| putative acetyltransferase [Yersinia pestis CO92]
 gi|149291300|gb|EDM41374.1| putative acetyltransferase [Yersinia pestis CA88-4125]
 gi|165916020|gb|EDR34627.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921514|gb|EDR38711.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165990098|gb|EDR42399.1| putative acyl-CoA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166960397|gb|EDR56418.1| putative acyl-CoA synthetase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|229687856|gb|EEO79929.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695251|gb|EEO85298.1| predicted acyl-CoA synthetase: NAD(P)-binding subunit and
           ATP-binding subunit [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|262363050|gb|ACY59771.1| putative acetyltransferase [Yersinia pestis D106004]
 gi|262366975|gb|ACY63532.1| putative acetyltransferase [Yersinia pestis D182038]
 gi|294355445|gb|ADE65786.1| putative acetyltransferase [Yersinia pestis Z176003]
          Length = 880

 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++ ++     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMVLARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|332638399|ref|ZP_08417262.1| carbamoyl-phosphate synthase large subunit [Weissella cibaria KACC
           11862]
          Length = 1025

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 55/186 (29%), Gaps = 34/186 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q + L+ +   PV    +  +V  A         P+ V  +    G             S
Sbjct: 131 QFRDLMTELGEPVPASAIAVTVAEAVQFADVQGYPVIVRPAYTLGG-------------S 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    +   ++              Q G   S V  V +E+     +E+   ++ D 
Sbjct: 178 GGGI--AQNEAELVQI-----------TQHGLDLSPVTQVLIEESIAGYKEIEFEVMRDT 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQ 182
                  +AS +   + + V       I    +    D    +  +    +   L++ G 
Sbjct: 225 KDNA-LIVASME---NFDPVGIHTGDSIVVAPVQTLSDVDYQMLRDAALKIIRALDIAGG 280

Query: 183 ARIDGG 188
             I   
Sbjct: 281 VNIQMA 286


>gi|258653918|ref|YP_003203074.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM
           44233]
 gi|258557143|gb|ACV80085.1| GCN5-related N-acetyltransferase [Nakamurella multipartita DSM
           44233]
          Length = 893

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           LL  Y + +     I S   A +A + +  P+
Sbjct: 681 LLAGYGIRIEDFRAIGSADEAVAAAQEIGYPV 712


>gi|228966839|ref|ZP_04127883.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228792938|gb|EEM40496.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|228998667|ref|ZP_04158254.1| Carbamoyl-phosphate synthase large chain [Bacillus mycoides
           Rock3-17]
 gi|228761135|gb|EEM10094.1| Carbamoyl-phosphate synthase large chain [Bacillus mycoides
           Rock3-17]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|229006169|ref|ZP_04163855.1| Carbamoyl-phosphate synthase large chain [Bacillus mycoides
           Rock1-4]
 gi|228755010|gb|EEM04369.1| Carbamoyl-phosphate synthase large chain [Bacillus mycoides
           Rock1-4]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|224116032|ref|XP_002332031.1| predicted protein [Populus trichocarpa]
 gi|222875256|gb|EEF12387.1| predicted protein [Populus trichocarpa]
          Length = 625

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 13/203 (6%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             ++ +P+   + I  +  A+ A      P  ++KS+  A         +   +    V 
Sbjct: 150 FSRHGIPLPDFMQIDDLEGAKRAGDLFGYP-LMLKSKRLAYDGRGNAVAKSEDELSSAVN 208

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
               L  + S   E+  + +++       G     +YVE     ++EL + +   R + +
Sbjct: 209 GSCFLPILDSFSNELAETFSILRSNRKALGGFDRGLYVEKWTSFVKELAVIVARGRDNSI 268

Query: 131 VAF-IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
             + +  T    D+E   ++    + K   D         +  L   +  +  + ++G  
Sbjct: 269 SCYPVVETIHKYDVESC-RENICHVVKAPADI-----PWKIRKLATDVAHKAVSSLEGAG 322

Query: 190 LFPNLYKAFCDKDMSLL--EINP 210
           +F    + F  KD  +L  E+ P
Sbjct: 323 VFA--VELFLTKDGQILLNEVAP 343


>gi|163815179|ref|ZP_02206560.1| hypothetical protein COPEUT_01337 [Coprococcus eutactus ATCC 27759]
 gi|158449588|gb|EDP26583.1| hypothetical protein COPEUT_01337 [Coprococcus eutactus ATCC 27759]
          Length = 1075

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R+      +P+ +  + ++V  A      +  P+ V  S +  GGRG
Sbjct: 668 RDLFREMMDKLEIPMPESGMATTVDEALEIAHKIGYPVMVRPSYVL-GGRG 717



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 51/184 (27%), Gaps = 32/184 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + +A+  V  SV  A +    L  P+                 +        
Sbjct: 133 KKSMNAIGIEMARSEVAYSVDEALAIADQLGYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  + + + +     L ++L           V  V VE+      EL L ++  R  
Sbjct: 178 GGGLVYNKEELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDC 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQK---IFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                       +D   V          +  +  D    +  E    + D +E+ G   +
Sbjct: 225 EGNMITVCFIENIDPLGVHTGDSFCSAPMLTISEDVQKRLQ-EQAYKIVDSVEVIGGTNV 283

Query: 186 DGGD 189
               
Sbjct: 284 QFAH 287


>gi|116694357|ref|YP_728568.1| Acyl-CoA synthetase [Ralstonia eutropha H16]
 gi|113528856|emb|CAJ95203.1| Acyl-CoA synthetase [Ralstonia eutropha H16]
          Length = 701

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 40/133 (30%), Gaps = 17/133 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E QAKALL +  +  A     ++  AA  A + +  P+ +         + +     L  
Sbjct: 484 EAQAKALLAEAGIASAPERSCATGDAAVLAAREIGFPVVMKILSPDILHKSEIGGVLLDV 543

Query: 65  DSKGGVRVESS--LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             +  VR      L+                       +R+  V V        E  + +
Sbjct: 544 RDEAAVRAGFDTLLERARQAA---------------PDARIEGVLVAKQLSGGVECIMGI 588

Query: 123 LVDRTSGMVAFIA 135
             D   G +A   
Sbjct: 589 NRDPVFGPIAMFG 601


>gi|134298153|ref|YP_001111649.1| carbamoyl phosphate synthase large subunit [Desulfotomaculum
           reducens MI-1]
 gi|134050853|gb|ABO48824.1| carbamoyl-phosphate synthase large subunit [Desulfotomaculum
           reducens MI-1]
          Length = 1074

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL+   +P  +G   ++V  A+     L  P+ V  S +  G
Sbjct: 674 KLLKGLGIPQTEGKTATNVEEAQKIAAELGFPVLVRPSYVLGG 716


>gi|331082143|ref|ZP_08331271.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330405738|gb|EGG85268.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 1072

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +AK     SV  A    + L  P  +  +                  + G
Sbjct: 133 KNAMDKLGIEMAKSAPAYSVEEALKIAEELGYPCVIRPA-------------YTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +       + +++           VN + VE+      EL + ++ D+T 
Sbjct: 180 GI--VYNEEELKKVAARGIAASM-----------VNQILVEESVIGWEELEVEVVRDKTG 226

Query: 129 GMVAF 133
             ++ 
Sbjct: 227 KKISI 231


>gi|320155023|ref|YP_004187402.1| phosphoribosylamine--glycine ligase [Vibrio vulnificus MO6-24/O]
 gi|319930335|gb|ADV85199.1| phosphoribosylamine-glycine ligase [Vibrio vulnificus MO6-24/O]
          Length = 429

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTAAYANFTDIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAIKDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|315084349|gb|EFT56325.1| phosphoribosylglycinamide synthetase, ATP-grasp domain protein
           [Propionibacterium acnes HL027PA2]
          Length = 478

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL +  +P A G    S   A +  + L  P+ V  S +  GGR                
Sbjct: 83  LLAELGIPQAPGGTARSSEEAFAVAEELGYPVLVRPSYV-IGGRAMA------------- 128

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
            + +S + +   +R+ + +     +       G       + DG D+
Sbjct: 129 -IVTSAEELKRYMRDAVHASPDKPVLVDRYLNGLECEVDAICDGTDV 174


>gi|289168189|ref|YP_003446458.1| hypothetical protein smi_1350 [Streptococcus mitis B6]
 gi|288907756|emb|CBJ22593.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+  +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVNEIGLPM 150


>gi|253584327|ref|ZP_04861525.1| phosphoribosylamine-glycine ligase [Fusobacterium varium ATCC
           27725]
 gi|251834899|gb|EES63462.1| phosphoribosylamine-glycine ligase [Fusobacterium varium ATCC
           27725]
          Length = 417

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  A   + +    A+  IKT   P  VVK+   A G+             
Sbjct: 106 AKDFMKKYGVKTAAYEIFTCPEKAKEYIKTCEFP-LVVKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L   +  + EI    ++ K     G     + VE+  D +     S+L    
Sbjct: 152 -GVLICQNLDEALKAVDEI----MVDKVFSSAG---EQIVVEEFLDGVE---ASILSVTD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SKVILPFISAKDHKKIGE 218


>gi|228902391|ref|ZP_04066546.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           IBL 4222]
 gi|228857248|gb|EEN01753.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           IBL 4222]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|228922639|ref|ZP_04085939.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228837068|gb|EEM82409.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|209966850|ref|YP_002299765.1| phosphoribosylamine--glycine ligase [Rhodospirillum centenum SW]
 gi|209960316|gb|ACJ00953.1| phosphoribosylamine--glycine ligase [Rhodospirillum centenum SW]
          Length = 430

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++ +P A         AA++ ++    P+ VVK+   A G+              
Sbjct: 107 KDLCARHGIPTAAYGRFRDAAAAKAFVRRTGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  ++    + + ++L    +  + G  G+    + +E+  D     + + L D T+
Sbjct: 152 GVVICQTVAEAEAAVDDVL----VGGRFGTAGA---ELVIEEFLDGEEASFFA-LCDGTT 203

Query: 129 GMVA 132
            +  
Sbjct: 204 ALPL 207


>gi|167766237|ref|ZP_02438290.1| hypothetical protein CLOSS21_00740 [Clostridium sp. SS2/1]
 gi|317497590|ref|ZP_07955908.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167712064|gb|EDS22643.1| hypothetical protein CLOSS21_00740 [Clostridium sp. SS2/1]
 gi|291559879|emb|CBL38679.1| phosphoribosylamine--glycine ligase [butyrate-producing bacterium
           SSC/2]
 gi|316895149|gb|EFV17313.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 423

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A     +    A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYKIPTAAYENFTDPDEAIKYLETAKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ +    ++ KQ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVKTL----MLDKQFGDAG---NEIVIEEFMTGRE---VSVLAFCD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKCMTSAQD 212


>gi|150005616|ref|YP_001300360.1| pyruvate carboxylase subunit A [Bacteroides vulgatus ATCC 8482]
 gi|294778574|ref|ZP_06743996.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Bacteroides
           vulgatus PC510]
 gi|149934040|gb|ABR40738.1| pyruvate carboxylase subunit A [Bacteroides vulgatus ATCC 8482]
 gi|294447523|gb|EFG16101.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Bacteroides
           vulgatus PC510]
          Length = 503

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 36/197 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSAEEAVRICNEIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 172 HSEDEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNHGNVI-- 222

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 223 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRQEMGEKAVAAARAVNYSGAGTIE 275

Query: 193 NLYKAFCDKDMSLLEIN 209
            L     ++D   LE+N
Sbjct: 276 FLVD--KNRDFYFLEMN 290


>gi|153806533|ref|ZP_01959201.1| hypothetical protein BACCAC_00797 [Bacteroides caccae ATCC 43185]
 gi|149131210|gb|EDM22416.1| hypothetical protein BACCAC_00797 [Bacteroides caccae ATCC 43185]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 33/155 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  A+     ++   ++A   +  P  VVK  + + G+G+           
Sbjct: 111 AKEL----GLKTARYFYAKTLDELKAAAAKIGFPC-VVKPLMSSSGKGQS---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
               +  +   +                +G  G  +  + +E+      E  ++LL    
Sbjct: 156 ----LVKNADELEHAWE--------YGCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQ 200

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
                      G +   +   DY +      IDP 
Sbjct: 201 KNGPTLFCPPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|308807008|ref|XP_003080815.1| putative carbamoyl phosphate synthetase (ISS) [Ostreococcus tauri]
 gi|116059276|emb|CAL54983.1| putative carbamoyl phosphate synthetase (ISS) [Ostreococcus tauri]
          Length = 849

 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L + N+    G V  S   A    + L  P+ V  S +  G           AD K  
Sbjct: 455 DILEELNILQPPGGVARSEEEALKIAEKLTYPVMVRPSYVLGG--RAMEIVGSNADLKRY 512

Query: 70  VRVESSLKS 78
           ++    +  
Sbjct: 513 IKTAVEVDE 521


>gi|283783480|ref|YP_003374234.1| phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein
           [Gardnerella vaginalis 409-05]
 gi|283441032|gb|ADB13498.1| phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein
           [Gardnerella vaginalis 409-05]
          Length = 427

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 52/187 (27%), Gaps = 34/187 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P       SS    E   K +  P  VVK  + + G G+             VR   +
Sbjct: 133 GLPTTPYCFASSYEELEDGAKKVGYPC-VVKPVMSSSGHGQS-----------IVRSSEN 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGS--RVNCVYVEDGADILRELY-LSLLVDRTSGMVA 132
           L +  ++ +          +    G     + V VE  A +  EL  L++          
Sbjct: 181 LLAAWNEAQH--------GRRAAAGHENECSRVIVEALAPLDYELTVLTISSCAGITTCE 232

Query: 133 FIASTQGGMDIEEVA--KDYPQKIFKLLIDPL----IGVTSEDVASLCDMLELQGQARID 186
            IA  Q   D  E     + P+ I     D       G+T      +       G     
Sbjct: 233 PIAQCQQDGDYRESWQPANIPESIRTNAKDIAKRAVEGLTD-----IAQEAGETGWGIYG 287

Query: 187 GGDLFPN 193
                  
Sbjct: 288 VELFVLK 294


>gi|228992621|ref|ZP_04152547.1| Carbamoyl-phosphate synthase large chain [Bacillus pseudomycoides
           DSM 12442]
 gi|228766953|gb|EEM15590.1| Carbamoyl-phosphate synthase large chain [Bacillus pseudomycoides
           DSM 12442]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|195953807|ref|YP_002122097.1| acetyl-CoA carboxylase, biotin carboxylase [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933419|gb|ACG58119.1| acetyl-CoA carboxylase, biotin carboxylase [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 472

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +++K  VP   G   ++ SV  A    K +  P+  +K+         G        
Sbjct: 118 SKEVMKKAGVPTVPGSDGILKSVEEAVEIAKEIGYPVL-LKA-------SAGGGGRGIRI 169

Query: 66  SKGGVRVESSLKSVISDIREILGS 89
            K    ++ + ++  S+ ++  G 
Sbjct: 170 CKDEEELKRNYEAAYSEAQKAFGR 193


>gi|118592231|ref|ZP_01549624.1| acyl-CoA synthetase, putative [Stappia aggregata IAM 12614]
 gi|118435203|gb|EAV41851.1| acyl-CoA synthetase, putative [Stappia aggregata IAM 12614]
          Length = 683

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 76/228 (33%), Gaps = 25/228 (10%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK LL  + + V +     +   A      +  P+ V+K +  A     G      +
Sbjct: 481 EAEAKELLSGFGIRVPRSSRSCAAQEAGECAAQIGFPV-VLKGEGIAHKTEAGAVVLNLS 539

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            ++      +++ +    + E++  +L     G T    +   +  G          +L 
Sbjct: 540 SAEAVAEAAAAMPAERFLVEEMITGSLAELIVGVTRDPAHGFVLTLGLG-------GILT 592

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +     V+ +  +      E ++      +          +         DM      A 
Sbjct: 593 ELIRDTVSVLVPSSRDEVREALSGLRTSAL----------LNGYRGRPAADM-----DAV 637

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA 232
           +D      +L +   D  +   EINPLI   +G +   D+ I  D+ A
Sbjct: 638 LDTVMALQDLVRTHADA-LHEAEINPLICRASGAI-AADALIRMDERA 683


>gi|56749649|sp|Q7MGT4|PUR2_VIBVY RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
          Length = 429

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTAAYANFTDIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAIKDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|332671724|ref|YP_004454732.1| phosphoribosylamine/glycine ligase [Cellulomonas fimi ATCC 484]
 gi|332340762|gb|AEE47345.1| phosphoribosylamine/glycine ligase [Cellulomonas fimi ATCC 484]
          Length = 431

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V S+V   E+A+     P YVVK    A G+G    ++     +
Sbjct: 106 AKEVMAAAGVPTAEPRVASTVAEVEAALDAFG-PPYVVKEDGLAAGKGVVVTQDRAVALE 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            G R     +     + E L    ++      G+ V
Sbjct: 165 HG-RACVEKEGGRVVVEEYLDGPEVSLFVLTDGTAV 199


>gi|331086994|ref|ZP_08336069.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330409444|gb|EGG88887.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 423

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A          A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYQIPTAAYENFDCAEEALAYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ +    ++  Q G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVKSL----MLDHQFGAAG---NTIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKTMTSAQD 212


>gi|320327172|gb|EFW83186.1| hypothetical protein PsgRace4_25546 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 1302

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTEMLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   +         
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPDGMADELCAAAIKLARAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|310823485|ref|YP_003955843.1| d-alanine--d-alanine ligase [Stigmatella aurantiaca DW4/3-1]
 gi|309396557|gb|ADO74016.1| D-alanine--D-alanine ligase [Stigmatella aurantiaca DW4/3-1]
          Length = 314

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 24/121 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +   + +P           +A  A  TLP    VV              K     S 
Sbjct: 109 AKWIFTTHGIPTPPYKTFKDATSAREAADTLPFSYPVV-------------VKPSREGSS 155

Query: 68  GGVRVESSLK---SVISDIREILGSTLITKQTGPTGSRVN-CVYVEDG-----ADILREL 118
            GV V  + +   + + D     G+ L+  +    G  V   V  ++        + RE 
Sbjct: 156 VGVHVCKTKEAYLAAVEDAARYAGTLLV--EQFIPGREVQGAVLDDEALGVIEVVVAREF 213

Query: 119 Y 119
           Y
Sbjct: 214 Y 214


>gi|291523486|emb|CBK81779.1| carbamoyl-phosphate synthase large subunit [Coprococcus catus GD/7]
          Length = 1066

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P   G  + +   A  A   L  P+ +  S +  GG+G              
Sbjct: 674 EILEKCKIPRPAGTTVFTTEEALKAANHLGYPVLIRPSYVL-GGQGMQIAVNDG------ 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +   ++ I + +    I       G  V    V DG D+
Sbjct: 727 -----DIVEFMNIINQTVQEHPILIDKYLMGKEVEVDGVCDGKDV 766


>gi|228909713|ref|ZP_04073536.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           IBL 200]
 gi|228850002|gb|EEM94833.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           IBL 200]
          Length = 1018

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|166032774|ref|ZP_02235603.1| hypothetical protein DORFOR_02489 [Dorea formicigenerans ATCC
           27755]
 gi|166027131|gb|EDR45888.1| hypothetical protein DORFOR_02489 [Dorea formicigenerans ATCC
           27755]
          Length = 437

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +   AA   ++T      V+K+   A G+             
Sbjct: 119 SKDLMKKYNIPTAAYENFTDPDAAIKYLETEAKFPIVLKADGLALGK------------- 165

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     +++I    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 166 -GVLICNTLEEAKDGVKKI----MLDKKFGSAG---NEMVIEEFMTGRE---VSVLSFVD 214

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 215 GNTIKTMTSAQD 226


>gi|325963000|ref|YP_004240906.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469087|gb|ADX72772.1| acyl-CoA synthetase (NDP forming) [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 900

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 68/228 (29%), Gaps = 25/228 (10%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL  Y + V       +   A +A  TL  P+  +K+   +  R +     +  D +   
Sbjct: 685 LLGHYGITVLPSKGFDTPDEAVAAADTLGWPV-ALKTTDPSL-RHRLDLGGVRLDIQDPE 742

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
            + +++  +   +       L  +   P G       +ED                    
Sbjct: 743 SLRANVVQMRRTLSRYGDPALEVQSMAPVGQACTFRAIEDPL----------------LG 786

Query: 131 VAFIASTQGG-MDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                   G  +++ +        +    +   I         L     L         D
Sbjct: 787 PVISFGLAGDAVNLLDDWAHRVPPLSAADVHDFI-RAPRAARKLFGYQGLPPVDVAALED 845

Query: 190 LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLR-VLDSKISFDDNALYR 235
           L   L        +++L+E NP++   +G +    D +I    NA +R
Sbjct: 846 LAGRLAWLKDSHPEIALVEFNPVLCGVSGAVILAADVRIG---NAAHR 890


>gi|312135186|ref|YP_004002524.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           owensensis OL]
 gi|311775237|gb|ADQ04724.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           owensensis OL]
          Length = 1075

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 13/105 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+   +G    ++  A     +L  P+ V  S +  G   K  F +        
Sbjct: 676 KILNKLNIKRPQGFTCYTLQEALEIANSLGYPVLVRPSYVLGGQGMKIAFDD-------- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +  ++S  + +    ++       G  +    + DG DI
Sbjct: 728 ----DDIVEMLSYAKNLNDHPILID-KYIVGKEIEVDAISDGEDI 767



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 69/220 (31%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K   PV    V++ V    +  K +  P+ +  +    G             + G
Sbjct: 133 KELMIKIGEPVVPSDVVNCVEDGVAFAKKIGFPVIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ +  +   R+ L  +            V+ + VE      +E+   ++  R S
Sbjct: 180 GI--ANNEEEFVEIARKGLSYS-----------PVHQILVEKSIKGWKEIEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                       +D   V       I   ++ P   ++ ++          + D L+++G
Sbjct: 225 NGCLITVCNMENIDP--VGIHTGDSI---VVAPSQTLSDKEYQMLRTSALKIIDALKIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
              +       +   A  + +  +   + L     G    
Sbjct: 280 GCNVQFALNPESFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|307704660|ref|ZP_07641560.1| hypothetical protein SMSK597_0660 [Streptococcus mitis SK597]
 gi|307621769|gb|EFO00806.1| hypothetical protein SMSK597_0660 [Streptococcus mitis SK597]
          Length = 388

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+  +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQAVNEIGLPM 150


>gi|78188917|ref|YP_379255.1| D-alanine-D-alanine ligase and related ATP-grasp enzyme-like
           [Chlorobium chlorochromatii CaD3]
 gi|78171116|gb|ABB28212.1| D-alanine-D-alanine ligase and related ATP-grasp enzymes-like
           protein [Chlorobium chlorochromatii CaD3]
          Length = 573

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           KA+     VP  K VVI S +  E+AI  +  P  V+K     GG+G
Sbjct: 208 KAVFNSLGVPTPKDVVIKSSNELETAIAAIGYPC-VLKPTNTGGGKG 253


>gi|75763136|ref|ZP_00742909.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74489373|gb|EAO52816.1| Carbamoyl-phosphate synthase large chain [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 975

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 581 GIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 617


>gi|53726118|ref|YP_104048.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           mallei ATCC 23344]
 gi|67643586|ref|ZP_00442331.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           mallei GB8 horse 4]
 gi|121598446|ref|YP_991773.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           mallei SAVP1]
 gi|124383372|ref|YP_001027266.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           mallei NCTC 10229]
 gi|126450043|ref|YP_001082798.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           mallei NCTC 10247]
 gi|166998584|ref|ZP_02264442.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           mallei PRL-20]
 gi|254179028|ref|ZP_04885682.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           ATCC 10399]
 gi|254202767|ref|ZP_04909130.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           FMH]
 gi|254208109|ref|ZP_04914459.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           JHU]
 gi|52429541|gb|AAU50134.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           ATCC 23344]
 gi|121227256|gb|ABM49774.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           SAVP1]
 gi|124291392|gb|ABN00661.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           mallei NCTC 10229]
 gi|126242913|gb|ABO06006.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           mallei NCTC 10247]
 gi|147747014|gb|EDK54091.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           FMH]
 gi|147752003|gb|EDK59070.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           JHU]
 gi|160694942|gb|EDP84950.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia mallei
           ATCC 10399]
 gi|238524958|gb|EEP88388.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           mallei GB8 horse 4]
 gi|243065268|gb|EES47454.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           mallei PRL-20]
          Length = 455

 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 116/342 (33%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +           +T+  P+ +  +                 
Sbjct: 119 AKQTMIRTGVPCVPGSDGALPEDPKEIVKIARTVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SHKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     KI+  +   
Sbjct: 263 ACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGVDIVQEQIKIAAGEKLS 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G I       G G+ + +      +  
Sbjct: 323 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRITSWHTPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++     +I  S+  V+GIL NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAINRMRIALSEMVVEGILTNI 418


>gi|302799302|ref|XP_002981410.1| hypothetical protein SELMODRAFT_420859 [Selaginella moellendorffii]
 gi|300150950|gb|EFJ17598.1| hypothetical protein SELMODRAFT_420859 [Selaginella moellendorffii]
          Length = 1194

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 35/171 (20%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           QA     K  V      + +++       +T+     +++     GG G G         
Sbjct: 228 QAMQ---KIGVKTPPSGIATTLEECFQIAETIGEFPLIIRPAFTLGGTGGG--------- 275

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +  + + + +  +  L +++ +            V VE      +E  L ++ D 
Sbjct: 276 -----IAYNREELETICKAGLTASITS-----------QVLVEKSLLGWKEYELEVMRD- 318

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +  V  I S      IE +          + + P   +T ++   L D  
Sbjct: 319 LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDQA 363



 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +L +  +    G +  S   A +  K +  P+ V  S +  G
Sbjct: 787 ILNQLGIKQPPGGIARSEEDALAIAKRVGFPVVVRPSYVLGG 828


>gi|296132352|ref|YP_003639599.1| phosphoribosylamine/glycine ligase [Thermincola sp. JR]
 gi|296030930|gb|ADG81698.1| phosphoribosylamine/glycine ligase [Thermincola potens JR]
          Length = 422

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 25/133 (18%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            AK L+ KYN+P AK    +   +A   IK    P  VVK+   A G+            
Sbjct: 105 MAKELMSKYNIPTAKYAKFTDAGSAIEYIKETGAPC-VVKADGLAAGK------------ 151

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             GV V    ++ I+ +R ++       +    G   + + +E+  +      +S+L   
Sbjct: 152 --GVVVARDEETAINAVRMMM-------EDKAFGQAGDMIIIEECLEGEE---VSILAFT 199

Query: 127 TSGMVAFIASTQG 139
               V  + S+Q 
Sbjct: 200 DGKTVVPMVSSQD 212


>gi|256964919|ref|ZP_05569090.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis
           HIP11704]
 gi|307273010|ref|ZP_07554257.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0855]
 gi|256955415|gb|EEU72047.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis
           HIP11704]
 gi|306510624|gb|EFM79647.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0855]
          Length = 415

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGVSGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|239820173|ref|YP_002947358.1| CoA-binding domain protein [Variovorax paradoxus S110]
 gi|239805026|gb|ACS22092.1| CoA-binding domain protein [Variovorax paradoxus S110]
          Length = 710

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 16/133 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA+L +  +PV    V  S+  A +A + +  P  V+K                     
Sbjct: 492 AKAVLAEAGLPVPWEAVACSLDEALAAARDMGFP-LVLKIV---------SPDIAHKTEV 541

Query: 68  GGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           GGV V   S   +  +  ++L    +         R+  V V        EL L    D 
Sbjct: 542 GGVFVGVRSEAQLRDEYEQLLARVALKAPKA----RIAGVLVAQMVQGGVELILGTKKDP 597

Query: 127 TSGMVAFIASTQG 139
             G    +A   G
Sbjct: 598 VFG-PMVMAGLGG 609


>gi|154500476|ref|ZP_02038514.1| hypothetical protein BACCAP_04148 [Bacteroides capillosus ATCC
           29799]
 gi|150270707|gb|EDM98003.1| hypothetical protein BACCAP_04148 [Bacteroides capillosus ATCC
           29799]
          Length = 418

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 26/180 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ KY++P AK    + + AA S ++    P+ VVK+   A G+             
Sbjct: 106 SKNLMAKYHIPTAKYNTFTDMDAALSYVREQGAPI-VVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S++     +R +    +  K+ G  G     + +E+      E+ +    D  
Sbjct: 152 -GVIVAQSVEEAEDAVRSM----MADKRFGEAG---TRLVIEECMT-GPEVTVLAFCDGE 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             +   + S+Q      +  K  P       I P    T E        + L   A +  
Sbjct: 203 HVVP--MPSSQDHKRAFDGNKG-PNTGGMGAISPSPNYTPEVAERCMKEIFLPTVAALKA 259


>gi|71733839|ref|YP_276110.1| urea amidolyase-like protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554392|gb|AAZ33603.1| urea amidolyase homologue [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 1266

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   +         
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPDGMADELCAAAIKLARAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|89893144|ref|YP_516631.1| carbamoyl phosphate synthase large subunit [Desulfitobacterium
           hafniense Y51]
 gi|89332592|dbj|BAE82187.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 1075

 Score = 40.7 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + K     +V  AE   + L  P+ +               +        
Sbjct: 133 KETMERLGIDMPKSSPAYTVEEAEKIAQELGYPVVI---------------RPAYTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + + +   + +++I             V VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNVEELKTIVNRGISASMIG-----------QVLVEESVLGWEELELEVVRDSKN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 QMITV 231



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q + ++ K  +P+ +  + S++  A +A + +  P+ V  S +  G   +  F E     
Sbjct: 669 QFRKMMEKLAIPMPQAGMASTLEEALAAAEMIGYPVMVRPSYVLGGRGMEIVFDEEQLRE 728

Query: 67  KGGVRVESSLK 77
                V+ + +
Sbjct: 729 YVAAAVDITPE 739


>gi|326331090|ref|ZP_08197388.1| acetyl-/propionyl-coenzyme A carboxylase subunit alpha
           [Nocardioidaceae bacterium Broad-1]
 gi|325951131|gb|EGD43173.1| acetyl-/propionyl-coenzyme A carboxylase subunit alpha
           [Nocardioidaceae bacterium Broad-1]
          Length = 1838

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 8/78 (10%)

Query: 8   AKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +K +  +  VPV   ++G V  ++  A ++ + +  P  ++K+    GGRG    +++ +
Sbjct: 128 SKLIAEEVGVPVAPWSRGGV-DTLEEALASAEKIGYP-LMLKATAGGGGRG---IRKVTS 182

Query: 65  DSKGGVRVESSLKSVISD 82
            ++     + +       
Sbjct: 183 GAELAEAYQRTRDEAERA 200


>gi|307289319|ref|ZP_07569274.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0109]
 gi|306499686|gb|EFM69048.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0109]
          Length = 415

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGVSGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|282863501|ref|ZP_06272560.1| phosphoribosylamine/glycine ligase [Streptomyces sp. ACTE]
 gi|282561836|gb|EFB67379.1| phosphoribosylamine/glycine ligase [Streptomyces sp. ACTE]
          Length = 417

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   NVP A+  V ++    + A+     P YVVK    A G+             
Sbjct: 106 AKDVMAGANVPTARSYVCTTPAEIDVALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V   +++  +                      + V +E+  D
Sbjct: 152 -GVVVTDDVEAARAHA-----------------LSCDRVVIEEFLD 179


>gi|238756045|ref|ZP_04617368.1| Phosphoribosylamine--glycine ligase [Yersinia ruckeri ATCC 29473]
 gi|238705712|gb|EEP98106.1| Phosphoribosylamine--glycine ligase [Yersinia ruckeri ATCC 29473]
          Length = 427

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAFYQNFTEIEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|189908180|gb|ACE60212.1| phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase (predicted)
           [Sorex araneus]
          Length = 876

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 21/103 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    +    A + + +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHGIPTARWKAFTRPEDACNFVMSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V  S +     ++EI    +  K  G  G     + VE+
Sbjct: 157 -GVIVAKSREEACKAVQEI----MQDKAFGAAG---ETIVVEE 191


>gi|166366010|ref|YP_001658283.1| acetyl-CoA synthetase [Microcystis aeruginosa NIES-843]
 gi|166088383|dbj|BAG03091.1| acetyl-CoA synthetase [Microcystis aeruginosa NIES-843]
          Length = 902

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 16/129 (12%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           + Y +PV    V  S   A +  ++L  P+ V+K               +   + GGV++
Sbjct: 508 KAYGIPVIVTKVAESAAEAVNLAESLGYPV-VMKLH---------SRTIIHKSAVGGVQL 557

Query: 73  E-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM- 130
              S ++V+   + I     ++ Q G        V ++   +I R   L +  +      
Sbjct: 558 PLFSPRAVVQAYQAI--KANVSAQVGREHFL--GVSIQPMLEIDRGYELIIGSNYDDQCG 613

Query: 131 VAFIASTQG 139
              I  T G
Sbjct: 614 PVIIFGTGG 622


>gi|15897555|ref|NP_342160.1| ribosomal protein S6 modification protein (rimK-2) [Sulfolobus
           solfataricus P2]
 gi|284174876|ref|ZP_06388845.1| ribosomal protein S6 modification protein (rimK-2) [Sulfolobus
           solfataricus 98/2]
 gi|6015830|emb|CAB57657.1| ribosomal protein S6 modification protein [Sulfolobus solfataricus
           P2]
 gi|13813810|gb|AAK40950.1| Ribosomal protein S6 modification protein (rimK-2) [Sulfolobus
           solfataricus P2]
 gi|261602318|gb|ACX91921.1| lysine biosynthesis enzyme LysX [Sulfolobus solfataricus 98/2]
          Length = 282

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           L K+ +P+   ++ +S  AA  A + +  P  + K  I + GR
Sbjct: 94  LFKHGIPIPDSIIAASPDAAMKAYEQMGFP-LIDKPPIGSWGR 135


>gi|219666420|ref|YP_002456855.1| carbamoyl phosphate synthase large subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219536680|gb|ACL18419.1| carbamoyl-phosphate synthase, large subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 1075

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + + K     +V  AE   + L  P+ +               +        
Sbjct: 133 KETMERLGIDMPKSSPAYTVEEAEKIAQELGYPVVI---------------RPAYTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + + +   + +++I             V VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNVEELKTIVNRGISASMIG-----------QVLVEESVLGWEELELEVVRDSKN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 QMITV 231



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q + ++ K  +P+ +  + S++  A +A + +  P+ V  S +  G   +  F E     
Sbjct: 669 QFRKMMEKLAIPMPQAGMASTLEEALAAAEMIGYPVMVRPSYVLGGRGMEIVFDEEQLRE 728

Query: 67  KGGVRVESSLK 77
                V+ + +
Sbjct: 729 YVAAAVDITPE 739


>gi|57242197|ref|ZP_00370136.1| phosphoribosylamine--glycine ligase [Campylobacter upsaliensis
           RM3195]
 gi|57016877|gb|EAL53659.1| phosphoribosylamine--glycine ligase [Campylobacter upsaliensis
           RM3195]
          Length = 415

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+++ +  A+ +  S    A   I++L  P  VVK+     G+              
Sbjct: 105 KEFLQRHKIKTARFINTSEFKEACEFIESL-TPPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +  +    ++L      +  G  G     + VE+  D
Sbjct: 150 GVIIAKSREEAVQVAAKML----SGESFGEAG---RKIVVEEFLD 187


>gi|295091307|emb|CBK77414.1| carbamoyl-phosphate synthase large subunit [Clostridium cf.
           saccharolyticum K10]
          Length = 1088

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +     P     V++    A    KT+  P+ V  +    G             + G
Sbjct: 133 KDAMESIGQPCVPSKVVNETEDALEFAKTIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    S + +    R  L  +            ++ + VE G    +E+   ++ DR  
Sbjct: 180 GI--ADSEEELREIARNGLALS-----------PIHQILVEKGISGWKEIEFEVIRDRAG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +           +E            ++I P + +   +          + D L+++G
Sbjct: 227 NCITV-------CSMENFDPVGIHTGDSIVIAPAVTLADREYQMLRSAALRIVDTLQVEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
                      +   A  + +  +   + L     G    
Sbjct: 280 GCNCQFALNPESFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|282900164|ref|ZP_06308120.1| cyanophycin synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281194913|gb|EFA69854.1| cyanophycin synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 646

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +   PV KG +++S   A +  + +  P+ V+K      G G           K 
Sbjct: 220 KEFLNRLGFPVPKGDIVTSERQALAVAQEIGYPV-VIKPVSGHKGIGVTPNIRDSRKLKS 278

Query: 69  GVRVESSL 76
              +  S 
Sbjct: 279 AYELAVSA 286


>gi|296139042|ref|YP_003646285.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Tsukamurella paurometabola DSM 20162]
 gi|296027176|gb|ADG77946.1| Carbamoyl-phosphate synthase L chain ATP- binding protein
           [Tsukamurella paurometabola DSM 20162]
          Length = 1811

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 18/101 (17%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK +  +  VPVA      + ++  A+   K +  P  ++K+    GGRG          
Sbjct: 124 AKLIAEEVGVPVAPWSRGPVETLEEAKEKAKDIGYP-LMLKATAGGGGRGIRM------- 175

Query: 66  SKGGVRVESSLKSV----ISDIREILGSTLITKQTGPTGSR 102
               V  ++ L+        +     GS ++  +   TG+R
Sbjct: 176 ----VASDADLEEAYLRTREEAERAFGSGVVFLERLVTGAR 212


>gi|297193444|ref|ZP_06910842.1| phosphoribosylamine-glycine ligase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197718282|gb|EDY62190.1| phosphoribosylamine-glycine ligase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 420

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++    + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAEVPTARSYVCTTAEEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|183982420|ref|YP_001850711.1| Mur family ligase [Mycobacterium marinum M]
 gi|183175746|gb|ACC40856.1| ligase, Mur-family [Mycobacterium marinum M]
          Length = 911

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL    +P  +  ++ SV  A  A + +  P+ V+K      GRG      +   S+ G+
Sbjct: 223 LLADLGLPAPRQKLVYSVDEAVGAAERIGYPV-VIKPLDGNHGRG----VTVNITSEDGI 277

Query: 71  RVESSLKSVISDI 83
                        
Sbjct: 278 AEAFETADAEGSA 290


>gi|258512096|ref|YP_003185530.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257478822|gb|ACV59141.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 395

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 33/185 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+ L ++ +PV     ISS+   + A++     + V   +   G  GKG++         
Sbjct: 118 KSTLAQHGLPVTPFAPISSMGDLDEALERFGERMVVKTCR--GGYDGKGQW--------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S + V    ++   +    +  G        +  E       E  LS++V R  
Sbjct: 167 ---MVRSREDVEKHAQDWARAMDHHRAAGFDDQP---LIAEAYVPFEGE--LSVIVARNR 218

Query: 129 GM------VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
                    A     +  + +  V   YP+ +     D            + + L + G 
Sbjct: 219 RGEVRAFPPAENIHKRHILHMSIVPARYPEDVIARAEDI--------ARRVAEALGVIGL 270

Query: 183 ARIDG 187
             ++ 
Sbjct: 271 IAVEM 275


>gi|146298802|ref|YP_001193393.1| phosphoribosylamine--glycine ligase [Flavobacterium johnsoniae
           UW101]
 gi|146153220|gb|ABQ04074.1| phosphoribosylamine--glycine ligase [Flavobacterium johnsoniae
           UW101]
          Length = 424

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 25/127 (19%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  L K+N+P A        +V      ++TL  P YV+K+   A G+           
Sbjct: 110 AKEFLMKHNIPTAAYDSFTAETVEEGCKFLETLQ-PPYVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +   L+   +++R +L            G+  + V +E+  D   EL   +L D
Sbjct: 158 ---GVLIIQDLEEAKTELRNML-------VHAKFGTASSKVVIEEFLD-GIELSCFVLTD 206

Query: 126 RTSGMVA 132
             S  + 
Sbjct: 207 GKSYKIL 213


>gi|325294259|ref|YP_004280773.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064707|gb|ADY72714.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 449

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 8   AKALLRKYNVPV-AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ +  K  VPV     +I +V  A    + +  P+ V  +    GGRG    + + +  
Sbjct: 119 AREVAIKAGVPVVPGSGIIKNVQEALKVCEEIGYPVLVKAAH-GGGGRGM---RLITSSK 174

Query: 67  KGGVRVESSLKSVISD 82
           +    + +++    + 
Sbjct: 175 EAKTLIVTAMAEAEAA 190


>gi|238765546|ref|ZP_04626460.1| Phosphoribosylamine--glycine ligase [Yersinia kristensenii ATCC
           33638]
 gi|238696241|gb|EEP89044.1| Phosphoribosylamine--glycine ligase [Yersinia kristensenii ATCC
           33638]
          Length = 428

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A     + V  A + ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAFYQNFTEVEPALAYVRKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVHDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|71909549|ref|YP_287136.1| acetyl-CoA carboxylase biotin carboxylase subunit [Dechloromonas
           aromatica RCB]
 gi|71849170|gb|AAZ48666.1| acetyl-CoA carboxylase carboxyltransferase subunit alpha
           [Dechloromonas aromatica RCB]
          Length = 452

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 111/339 (32%), Gaps = 57/339 (16%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  ++   VP V   +G +           + +  P+ +  +                 
Sbjct: 119 AKDAMKVAGVPCVPGSEGELPDDPKEIVKIARAVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + +   ++  GS                VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVQMTKQEAGSFFGNP----------AVYMEKYLENPRHVEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           D+    +      +    ++   +   ++     I P LI    E  A  C  +  +G  
Sbjct: 217 DQHGSAIYL---GERDCSMQRRHQKVIEEAPAPHIAPRLINRIGERCAEACRKIGYRGAG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
             +           + + +   +E+N       P+  M  G  +     +++F +   Y+
Sbjct: 274 TFEF---------LYENNEFYFIEMNTRVQVEHPVTEMITGVDIVQEQIRVAFGEKLRYK 324

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPAN 295
             DI   R  + E     E      +++   GNI    +  G     +D     G    +
Sbjct: 325 QKDIV-CRGHAIECRINAE---DPFTFVPSPGNI-TFYHPPGGPGIRVDSHIYQGYKVPS 379

Query: 296 FLD------VGGGADQDKVAAAFKIITSDSSVKGILINI 328
             D      +  G  +++     +I  S+ S++GI  NI
Sbjct: 380 HYDSMVAKVISYGDTREQAIRRMRIALSEMSIQGIKTNI 418


>gi|305664129|ref|YP_003860417.1| carbamoyl-phosphate synthase large subunit [Ignisphaera aggregans
           DSM 17230]
 gi|304378698|gb|ADM28537.1| carbamoyl-phosphate synthase large subunit [Ignisphaera aggregans
           DSM 17230]
          Length = 1074

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 37/166 (22%)

Query: 8   AKALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +++L RK    +N+PV     ++S+  A    K +  P+ V   ++     G G F    
Sbjct: 126 SRSLFRKTMIEHNIPVPPSEAVTSIDDAIRVAKEMGFPVMV---RVSFNLGGAGSF---- 178

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                   +  + + +     + L S     + G        V +E      +E+   ++
Sbjct: 179 --------IAWNEEQLY----KRLRSAFAQSEIGE-------VLIEKYLHHWKEIEFEVV 219

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
            D     VA IA  +   +++ +     + I   ++ P   +T  +
Sbjct: 220 RDAY-DNVAAIACLE---NLDPMGVHTGESI---VVAPCQTLTDYE 258



 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 63/206 (30%), Gaps = 37/206 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +     +  ++++      + +  P+ +  S + +G                 
Sbjct: 679 ELLDKLRIKQPPWIAATNINEVIKFAEDIGYPVLIRPSYVLSG---------------SA 723

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  +   +I  I+      L TK +         V V    D   E  +  + D  + 
Sbjct: 724 MKIAWNRNELIEYIK------LATKISPKY-----PVVVSKFIDNAIEFEIDAVGDGETA 772

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           +   I   +    +          I  L ID +          +  +LE++G   +    
Sbjct: 773 IGTVIEHIEPAG-VHSGDATMSIPIRYLPIDIVRKAVD-VAMKINRVLEIKGPYNLQF-- 828

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMK 215
                   +   D+ ++E+N      
Sbjct: 829 -------LYDGNDIYVIELNLRASRS 847


>gi|296110381|ref|YP_003620762.1| carbamoyl-phosphate synthase large subunit [Leuconostoc kimchii
           IMSNU 11154]
 gi|295831912|gb|ADG39793.1| carbamoyl-phosphate synthase large subunit [Leuconostoc kimchii
           IMSNU 11154]
          Length = 1059

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 41/213 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL+ + + P+ +  + +++  A     T   P+ V  +    G             + G
Sbjct: 133 KALMERLHEPIPESTIATTLEEALDFADTHGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++   +       L  +            V  V +E      +E+   ++  R +
Sbjct: 180 GI--ANNHAELSDIAANGLDLS-----------PVTQVLIERSIAGYKEIEFEVM--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
              A + ++    D   V       I    +    D  + +  +    +   L+++G   
Sbjct: 225 HDNALVVASMENFDP--VGIHTGDSIVTAPVQTLSDREVQMMRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I    L P+ YK +       +E+NP +   + 
Sbjct: 283 IQMA-LDPHSYKYYI------IEVNPRVSRSSA 308


>gi|290476982|ref|YP_003469893.1| phosphoribosylglycinamide synthetase [Xenorhabdus bovienii SS-2004]
 gi|289176326|emb|CBJ83131.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Xenorhabdus
           bovienii SS-2004]
          Length = 427

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + +K +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAAYQNFTEIEPALTYLKKMGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++   + ++++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVVVAMTMEEAQNAVKDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VVPM 209


>gi|285019229|ref|YP_003376940.1| carbamoyl-phosphate synthase, cpsase [Xanthomonas albilineans GPE
           PC73]
 gi|283474447|emb|CBA16948.1| putative carbamoyl-phosphate synthase, cpsase protein [Xanthomonas
           albilineans]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 49/177 (27%), Gaps = 28/177 (15%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
              VP  +  + ++   A +  + +  P+ V               K     +   V + 
Sbjct: 128 SAGVPTPQFGIAATHQEALAIAQRIGYPVVV---------------KPTDMSASAFVALA 172

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCV-YVEDGADILRELYLSLLVDRTSGMVA 132
            +   ++S         +   +    G  +N V  +E+  D      +S+     +G   
Sbjct: 173 MTDAELLSATDA-----VTCYRQNARGQDLNAVALIEEFLDGQE---VSVETVTVNGATQ 224

Query: 133 FIA----STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
            IA    S        E     P  +    +  +  +    + ++     +      
Sbjct: 225 VIAVTDKSLYSDTLFIETGHMVPAILDPETVRAVGDLAEAALRAVGYSHGVAHTEIK 281


>gi|226312279|ref|YP_002772173.1| biotin carboxylase [Brevibacillus brevis NBRC 100599]
 gi|226095227|dbj|BAH43669.1| probable biotin carboxylase [Brevibacillus brevis NBRC 100599]
          Length = 448

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 20/105 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + + NVP+  G   +I  +  A    K +  P+ +VK+    GGR           
Sbjct: 119 AKATMSQANVPLVPGTDGLIDDIDEALQVAKKIGYPV-IVKATAGGGGR----------- 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
              G+RV      +   IR+           G  G  +   YVE+
Sbjct: 167 ---GMRVAFDADELSKAIRQ--AQKEAETAFGNAGVYLEK-YVEE 205


>gi|210610312|ref|ZP_03288341.1| hypothetical protein CLONEX_00531 [Clostridium nexile DSM 1787]
 gi|210152542|gb|EEA83548.1| hypothetical protein CLONEX_00531 [Clostridium nexile DSM 1787]
          Length = 1057

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 53/190 (27%), Gaps = 46/190 (24%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +   PV    + SS+       + +  PL                 +        
Sbjct: 133 KELCEELGEPVLPSDIASSIEEGLKVAEKIGYPLV---------------LRPAFTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     + + +++ ++  L  +            V+ V +E      +E+   ++ D   
Sbjct: 178 GGGFADNEEELVALMKNALSLS-----------PVHQVLIEKSIKGYKEIEYEVMRD--- 223

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVT-------SEDVASLCDMLE 178
                  S    + I  +    P  I     +++ P   +T             +   L 
Sbjct: 224 -------SNDTAITICNMENLDPVGIHTGDSIVVCPSQTLTNKEYQMLRYSALKIIRALG 276

Query: 179 LQGQARIDGG 188
           ++G   +   
Sbjct: 277 IEGGCNVQFA 286



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL   ++P  KG  ++S+     A   +  P+ V  S +  G             +   
Sbjct: 669 KLLASLHIPQPKGQAVTSIEDGIRAANEIGYPVLVRPSFVLGG------------RAMQI 716

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           V  E +L++ +    EI     +       G  V    V DG ++
Sbjct: 717 VAKEEALRNYLKTAVEINEEKPVLVDKYIRGKEVEVDAVCDGKNV 761


>gi|60099665|gb|AAX12967.1| adenosine 3 [Drosophila miranda]
 gi|60099667|gb|AAX12968.1| adenosine 3 [Drosophila miranda]
 gi|60099669|gb|AAX12969.1| adenosine 3 [Drosophila miranda]
 gi|60099671|gb|AAX12970.1| adenosine 3 [Drosophila miranda]
 gi|60099673|gb|AAX12971.1| adenosine 3 [Drosophila miranda]
 gi|60099675|gb|AAX12972.1| adenosine 3 [Drosophila miranda]
 gi|60099677|gb|AAX12973.1| adenosine 3 [Drosophila miranda]
 gi|60099679|gb|AAX12974.1| adenosine 3 [Drosophila miranda]
 gi|60099681|gb|AAX12975.1| adenosine 3 [Drosophila miranda]
 gi|60099683|gb|AAX12976.1| adenosine 3 [Drosophila miranda]
 gi|60099685|gb|AAX12977.1| adenosine 3 [Drosophila miranda]
 gi|60099687|gb|AAX12978.1| adenosine 3 [Drosophila miranda]
          Length = 459

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8  AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
          AK  + ++ +P A+    +  + A++ I++ P    VVK+   A G+             
Sbjct: 7  AKDFMLRHGIPTARYESFTDTNKAKAFIRSAPYQALVVKAAGLAAGK------------- 53

Query: 68 GGVRVESSLKSVISDIREILG 88
           GV V +++      + EILG
Sbjct: 54 -GVVVAANVDEACQAVDEILG 73


>gi|73661389|ref|YP_300170.1| hypothetical protein SSP0080 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72493904|dbj|BAE17225.1| hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 382

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 31/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+L  K N+P AK +  +     +  IK    P+ +               K +      
Sbjct: 114 KSLFEKANIPTAKSIQFNDATELKECIKEFTFPVII---------------KPMDFGGSD 158

Query: 69  GVRVESSLKS---VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           GV + ++ K         ++I+ +   T          N   +E   D   E+ + +L  
Sbjct: 159 GVYLANNEKECMDAYRKSKQIMETYADTFHVSK-----NKFLIETFIDSHDEVSVEVLCG 213

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
                V  +         E+     P       + P     +ED+ +L 
Sbjct: 214 HHFYEVITV--------TEKYLSPRPWFTEMGHLVPSHRYKNEDIKNLA 254


>gi|304390264|ref|ZP_07372218.1| phosphoribosylamine-glycine ligase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326746|gb|EFL93990.1| phosphoribosylamine-glycine ligase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 420

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG---KGRFKELPA 64
           AK ++++  V  A  V   ++  A  A++    P YVVK    A G+G      F     
Sbjct: 106 AKTIMQQARVATAASVACRTLEEARGALQRFGSP-YVVKQDGLAAGKGVVVTSDFYVALT 164

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
            +   +   ++       I E L
Sbjct: 165 HAAACIEAVANPHEPAVVIEEFL 187


>gi|300490765|gb|ADK22962.1| putative biotin carboxylase [uncultured bacterium]
          Length = 172

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VPV  G   V++    A+   + +  P+ ++K+    GGR           
Sbjct: 45  AKKTMKSAGVPVIPGGEGVLAGPDEAKKLAEGMGYPI-MLKATAGGGGR----------- 92

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R  ++ + +            +  Q    G     +Y+E   +  R + + +L D
Sbjct: 93  ---GMRFVTNKEELSDLYD-------VAYQEALNGFGNGDLYIEKFIEKPRHIEIQILAD 142

Query: 126 RTSGMVAF 133
           +   ++ F
Sbjct: 143 KVGNVIQF 150


>gi|298345978|ref|YP_003718665.1| phosphoribosylamine--glycine ligase [Mobiluncus curtisii ATCC
           43063]
 gi|298236039|gb|ADI67171.1| phosphoribosylamine--glycine ligase [Mobiluncus curtisii ATCC
           43063]
          Length = 420

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG---KGRFKELPA 64
           AK ++++  V  A  V   ++  A  A++    P YVVK    A G+G      F     
Sbjct: 106 AKTIMQQARVATAASVACRTLEEARGALQRFGSP-YVVKQDGLAAGKGVVVTSDFYVALT 164

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
            +   +   ++       I E L
Sbjct: 165 HAAACIEAVANPHEPAVVIEEFL 187


>gi|260588555|ref|ZP_05854468.1| carbamoyl-phosphate synthase, large subunit [Blautia hansenii DSM
           20583]
 gi|260541030|gb|EEX21599.1| carbamoyl-phosphate synthase, large subunit [Blautia hansenii DSM
           20583]
          Length = 1072

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +AK     SV  A    + L  P  +  +                  + G
Sbjct: 133 KNAMDKLGIEMAKSAPAYSVEEALKIAEELGYPCVIRPA-------------YTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +       + +++           VN + VE+      EL + ++ D+  
Sbjct: 180 GI--VYNEEELKKVAARGIAASM-----------VNQILVEESVIGWEELEVEVVRDKAG 226

Query: 129 GMVAF 133
             ++ 
Sbjct: 227 KKISI 231


>gi|53720592|ref|YP_109578.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei K96243]
 gi|76811288|ref|YP_334872.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 1710b]
 gi|126438887|ref|YP_001060477.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 668]
 gi|126454467|ref|YP_001067741.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 1106a]
 gi|134280032|ref|ZP_01766743.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 305]
 gi|167721286|ref|ZP_02404522.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei DM98]
 gi|167740255|ref|ZP_02413029.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 14]
 gi|167817473|ref|ZP_02449153.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 91]
 gi|167825879|ref|ZP_02457350.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 9]
 gi|167847362|ref|ZP_02472870.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei B7210]
 gi|167895950|ref|ZP_02483352.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei 7894]
 gi|167904336|ref|ZP_02491541.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei NCTC 13177]
 gi|167920548|ref|ZP_02507639.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           pseudomallei BCC215]
 gi|217420966|ref|ZP_03452471.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 576]
 gi|226196852|ref|ZP_03792431.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813871|ref|YP_002898322.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei MSHR346]
 gi|242317584|ref|ZP_04816600.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 1106b]
 gi|254180593|ref|ZP_04887191.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 1655]
 gi|254190970|ref|ZP_04897476.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254199056|ref|ZP_04905471.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei S13]
 gi|254262087|ref|ZP_04953141.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299320|ref|ZP_04966770.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 406e]
 gi|52211006|emb|CAH36994.1| biotin carboxylase [Burkholderia pseudomallei K96243]
 gi|76580741|gb|ABA50216.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 1710b]
 gi|126218380|gb|ABN81886.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 668]
 gi|126228109|gb|ABN91649.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 1106a]
 gi|134248039|gb|EBA48122.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 305]
 gi|157808987|gb|EDO86157.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 406e]
 gi|157938644|gb|EDO94314.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169656886|gb|EDS88283.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei S13]
 gi|184211132|gb|EDU08175.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia
           pseudomallei 1655]
 gi|217396378|gb|EEC36395.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 576]
 gi|225931112|gb|EEH27120.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237503919|gb|ACQ96237.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei MSHR346]
 gi|242140823|gb|EES27225.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 1106b]
 gi|254220776|gb|EET10160.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Burkholderia
           pseudomallei 1710a]
          Length = 455

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 116/342 (33%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +           +T+  P+ +  +                 
Sbjct: 119 AKQTMIRTGVPCVPGSDGALPEDPKEIVKIARTVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SHKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     KI+  +   
Sbjct: 263 ACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGVDIVQEQIKIAAGEKLS 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G I       G G+ + +      +  
Sbjct: 323 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRITSWHTPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++     +I  S+  V+GIL NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAINRMRIALSEMVVEGILTNI 418


>gi|330718634|ref|ZP_08313234.1| carbamoyl-phosphate synthase large subunit [Leuconostoc fallax KCTC
           3537]
          Length = 1059

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 41/213 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL+ + N P+ +  + +++  A +       P+ V  +    G         +  D   
Sbjct: 133 KALMERLNEPIPESTIATTLDEALAFADQHGYPVIVRPAYTLGG-----TGGGIAKDHVQ 187

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            V + ++            G  L           V  + VE      +E+   ++ D +S
Sbjct: 188 LVEIATN------------GLDLS---------PVTQILVERSIAGYKEIEFEVMRD-SS 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                +AS +   + + V       I    +    D  + +  +    +   L+++G   
Sbjct: 226 DNALVVASME---NFDPVGIHTGDSIVVAPVQTLSDRELQMMRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I    L    YK +       +E+NP +   + 
Sbjct: 283 IQMA-LDTQSYKYYI------IEVNPRVSRSSA 308


>gi|260913709|ref|ZP_05920185.1| phosphoribosylamine-glycine ligase [Pasteurella dagmatis ATCC
           43325]
 gi|260632248|gb|EEX50423.1| phosphoribosylamine-glycine ligase [Pasteurella dagmatis ATCC
           43325]
          Length = 427

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEIAVKDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|148642548|ref|YP_001273061.1| carbamoylphosphate synthase, large subunit, CarB
           [Methanobrevibacter smithii ATCC 35061]
 gi|222445957|ref|ZP_03608472.1| hypothetical protein METSMIALI_01605 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349504|ref|ZP_05974921.1| carbamoyl-phosphate synthase, large subunit [Methanobrevibacter
           smithii DSM 2374]
 gi|167006445|sp|A5UKG5|CARB_METS3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|148551565|gb|ABQ86693.1| carbamoylphosphate synthase, large subunit, CarB
           [Methanobrevibacter smithii ATCC 35061]
 gi|222435522|gb|EEE42687.1| hypothetical protein METSMIALI_01605 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861868|gb|EFC94166.1| carbamoyl-phosphate synthase, large subunit [Methanobrevibacter
           smithii DSM 2374]
          Length = 1058

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 34/175 (19%)

Query: 18  PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLK 77
           P+ K   + SV  A  A+K +  P+ V  +    G             + GGV    + +
Sbjct: 140 PIPKCHAVESVEEAIEAVKDIGYPVIVRPAFTLGG-------------TGGGV--AYNEE 184

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
            +I      L  +            +N V +++     +E    ++  R       I   
Sbjct: 185 ELIEIATHGLDMSF-----------INQVLIDESVLGWKEFEYEVM--RDKEDTCIIVCN 231

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQARIDGG 188
              +D   +     + +       L    S+ +      +   L +QG   I   
Sbjct: 232 MENIDP--MGIHTGESVVVAPAQNLNDRDSQALRDASIKIIRALGIQGGCNIQFA 284


>gi|27364629|ref|NP_760157.1| phosphoribosylamine--glycine ligase [Vibrio vulnificus CMCP6]
 gi|31076952|sp|Q8DD07|PUR2_VIBVU RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|27360774|gb|AAO09684.1| Phosphoribosylamine--glycine ligase [Vibrio vulnificus CMCP6]
          Length = 429

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTAAYANFTDIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAIKDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|302773047|ref|XP_002969941.1| hypothetical protein SELMODRAFT_440891 [Selaginella moellendorffii]
 gi|300162452|gb|EFJ29065.1| hypothetical protein SELMODRAFT_440891 [Selaginella moellendorffii]
          Length = 1194

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 35/171 (20%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           QA     K  V      + +++       +T+     +++     GG G G         
Sbjct: 228 QAMQ---KIGVKTPPSGIATTLEECFQIAETIGEFPLIIRPAFTLGGTGGG--------- 275

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +  + + + +  +  L +++ +            V VE      +E  L ++ D 
Sbjct: 276 -----IAYNREELETICKSGLTASITS-----------QVLVEKSLLGWKEYELEVMRD- 318

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +  V  I S      IE +          + + P   +T ++   L D  
Sbjct: 319 LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDQA 363



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +L +  +    G +  S   A +  K +  P+ V  S +  G
Sbjct: 787 ILNQLGIKQPPGGIARSEEDALAIAKRVGFPVVVRPSYVLGG 828


>gi|270265376|ref|ZP_06193637.1| hypothetical protein SOD_m01080 [Serratia odorifera 4Rx13]
 gi|270040780|gb|EFA13883.1| hypothetical protein SOD_m01080 [Serratia odorifera 4Rx13]
          Length = 882

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 55/147 (37%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q+  +L+ Y++      +      A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQS--ILQAYDLATLPTWIAEDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTATEVQRAADAILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +++  D   G +  +   +GG++  +
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEWRQ 610


>gi|258514050|ref|YP_003190272.1| phosphoribosylamine/glycine ligase [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777755|gb|ACV61649.1| phosphoribosylamine/glycine ligase [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 425

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++ KY +P AK    +   AA + +K +  P  VVK+   A G+G
Sbjct: 106 AKEIMFKYGIPTAKYGSFTDPAAAYAYLKEVGVPC-VVKADGLAAGKG 152


>gi|212635205|ref|YP_002311730.1| GNAT family acetyltransferase [Shewanella piezotolerans WP3]
 gi|212556689|gb|ACJ29143.1| Acetyltransferase, GNAT family [Shewanella piezotolerans WP3]
          Length = 897

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 16/143 (11%)

Query: 3   IHE-YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           I E +++ ++L  Y +   +    ++   A +  +    P+  +K Q             
Sbjct: 494 ILETHESSSILGAYGLNTIETWFANTAEEAVNLARKAGYPI-ALKVQ--------SPDIH 544

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYL 120
             +D  G +   +S   V    + I+   +         G  V  + +  G    +E+ +
Sbjct: 545 HKSDVHGVMLNLTSDNEVEHAAKAIIDRVISLDPDAKIEGLIVQKMALTAG---AQEIRV 601

Query: 121 SLLVDRTSGMVAFIASTQGGMDI 143
           ++  D   G    +   +GG + 
Sbjct: 602 AVANDPVFGPAILLG--EGGSEW 622


>gi|87125678|ref|ZP_01081522.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
           RS9917]
 gi|86166654|gb|EAQ67917.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
           RS9917]
          Length = 1107

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 32/169 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + SS+  A++    +     +++     GG G G           
Sbjct: 133 KQAMERIGVKVCPSGIASSLEEADAVGAAIGSFPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L ++            V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEDYAAICKSGLDAS-----------PVSQILIEQSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             V  + S      IE +          + + P   +T  +   L D  
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQA 269


>gi|332296906|ref|YP_004438828.1| Diaminopimelate epimerase [Treponema brennaborense DSM 12168]
 gi|332180009|gb|AEE15697.1| Diaminopimelate epimerase [Treponema brennaborense DSM 12168]
          Length = 1430

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 62/205 (30%), Gaps = 45/205 (21%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL + N+   KG  + +   A SA + L  P+ +  S +  G      F E        
Sbjct: 705 ELLERLNIKRPKGFSVLTTEEAVSAAEKLTYPVLLRPSYVLGGQNMIIAFTEADIREYMA 764

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +  ++++ +   + ++G  L                + DG DIL              
Sbjct: 765 IILAQNIENPVLIDKYLMGIELEVDA------------ICDGEDILI------------- 799

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQARI 185
               +        IE         I         D L          L   L  +G   I
Sbjct: 800 -PGIM------EHIERTGIHSGDSIAVYPAWNLNDILTEKIINQSRELALALGTKGLVNI 852

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINP 210
                    Y  + D ++ ++E+NP
Sbjct: 853 Q--------YLIY-DNELYIIEVNP 868


>gi|321314380|ref|YP_004206667.1| phosphoribosylamine--glycine ligase [Bacillus subtilis BSn5]
 gi|320020654|gb|ADV95640.1| phosphoribosylamine--glycine ligase [Bacillus subtilis BSn5]
          Length = 422

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 15/119 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A+    +S   A++ ++    P+ V+K+   A G+G      +    +
Sbjct: 106 AKDLMKKYDIPTAEYDTFTSFDEAKAYVQEKGAPI-VIKADGLAAGKG----VTVAMTEE 160

Query: 68  GGVRVESSLKS--------VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             +                    I E L     +      G +V  + +    D  R  
Sbjct: 161 EAIACLHDFLEDEKFGDASASVVIEEYLTGEEFSLMAFVKGEKVYPMVIAQ--DHKRAF 217


>gi|300742258|ref|ZP_07072279.1| phosphoribosylamine--glycine ligase [Rothia dentocariosa M567]
 gi|300381443|gb|EFJ78005.1| phosphoribosylamine--glycine ligase [Rothia dentocariosa M567]
          Length = 445

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 16/108 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ + NVP A+  V ++      A+     P YVVK    A G+             
Sbjct: 124 AKQVMEEANVPTARAFVATTEAEVAQALDEFGAP-YVVKDDGLAAGK------------- 169

Query: 68  GGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADI 114
            GV V  +  + +        +   +  +    G  V+   + DG ++
Sbjct: 170 -GVVVTENRDAALEHANACFAAGGSVVIEEFLDGPEVSLFVISDGKNV 216


>gi|188533072|ref|YP_001906869.1| Putative acyl-CoA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188028114|emb|CAO95971.1| Putative acyl-CoA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 889

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 37/244 (15%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q + +L+ Y +      + S+   A      +  P+ +         + +       ++
Sbjct: 484 HQVQPILQAYGLKTPPTWIASNSSQAVQIAAKIGYPVAL---------KLRSPDIPHKSE 534

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +G +    +   V      ++              R+  + V+  A+      L ++V+
Sbjct: 535 VQGVMLFLRTADEVRQAANAMVDRAAAAWPQA----RIQGLLVQSMANRAGGHELRIVVE 590

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           +       I   +GG   ++       +     + P   +       L     + G+ R 
Sbjct: 591 QDPLFGPIIMLGEGGSPWQD------DRQAATALPP---LNMALARYLVKQALVSGKIRG 641

Query: 186 DGG----------DLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI---SFDDN 231
                         L   +     D  ++  LEI+PL+    G    LD  +    F+ +
Sbjct: 642 RSALHTLDPDGLIQLLVQVSNLIVDCPEIVRLEIHPLLASDTG-FTPLDVTLQLAHFNGD 700

Query: 232 ALYR 235
           A  R
Sbjct: 701 AQSR 704


>gi|154174995|ref|YP_001407544.1| carbamoyl phosphate synthase large subunit [Campylobacter curvus
           525.92]
 gi|112803772|gb|EAU01116.1| carbamoyl-phosphate synthase, large subunit [Campylobacter curvus
           525.92]
          Length = 1087

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 51/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA +++  + + +     +   A  A   +  PL +  S    G                
Sbjct: 131 KATMQRIGMDLPESRYAYNFDEAIFAANEIGFPLIIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L ++            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVAYNMDEFRELAAAGLDAS-----------PIHEILIEESLLGWKEYEMEVIRDRND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++  ++ D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQAMRDA 265


>gi|329850497|ref|ZP_08265342.1| acetyl-CoA carboxylase, biotin carboxylase [Asticcacaulis
           biprosthecum C19]
 gi|328840812|gb|EGF90383.1| acetyl-CoA carboxylase, biotin carboxylase [Asticcacaulis
           biprosthecum C19]
          Length = 452

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 8   AKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK   R   +PV   + G V  +V  A +A +T+  P+ + K+    GGRG  +  +   
Sbjct: 121 AKQAARDSGIPVVPGSDGGVA-TVEEAMAAAETIGFPVLI-KAASGGGGRGM-KVAKDRD 177

Query: 65  DSKGGVRVESSLKSVI 80
                V    S  +  
Sbjct: 178 SLAEAVMSAQSEAAAA 193


>gi|300697554|ref|YP_003748215.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding
           subunit [Ralstonia solanacearum CFBP2957]
 gi|299074278|emb|CBJ53823.1| fused acyl-CoA synthetase: NAD(P)-binding subunit; ATP-binding
           subunit [Ralstonia solanacearum CFBP2957]
          Length = 903

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 26/149 (17%)

Query: 264 ALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVGG 301
            L+G  +G + NG G  +   D +   GG  A                     N +D+ G
Sbjct: 298 PLNGERLGIVTNGGGAGVMATDALVRAGGRLAVPDADILRQLDEVLPPTWSHGNPIDIVG 357

Query: 302 GADQDKVAAAFKIITSDSSVKG-ILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360
            A   +   A +I+ +  +    +LI+    I+    + + ++ A   ++  +     L 
Sbjct: 358 DAPIARYVRALQILQACPATDATLLIHAPTAIVPSTDIAEAVVQAAPALRQPL-FTSWLG 416

Query: 361 GANVDIGNRLIAESGLNVITAIDLDDAAQ 389
           G  V    ++   +G+   T    + A +
Sbjct: 417 GDAVAQARQICRRAGIP--TYETPEQAVR 443


>gi|294632621|ref|ZP_06711181.1| lysine biosynthesis enzyme LysX [Streptomyces sp. e14]
 gi|292835954|gb|EFF94303.1| lysine biosynthesis enzyme LysX [Streptomyces sp. e14]
          Length = 289

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR--GKGRFKELPADSKGGVRVE 73
            +P  + VV  +  AA  AI+ +  P  VVK  + + GR   K   ++         +  
Sbjct: 107 GLPTPRTVVAVTPDAALGAIEEIGYP-AVVKPAVGSWGRLMSKVNDRDAAETLVEHKQAL 165

Query: 74  SSLKSVISDIREILGS 89
            S    +  ++E++  
Sbjct: 166 RSPSHSVFYVQELIDK 181


>gi|161871014|ref|YP_001600194.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis 053442]
 gi|161596567|gb|ABX74227.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis 053442]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|319939104|ref|ZP_08013468.1| carbamoylphosphate synthase large subunit [Streptococcus anginosus
           1_2_62CV]
 gi|319812154|gb|EFW08420.1| carbamoylphosphate synthase large subunit [Streptococcus anginosus
           1_2_62CV]
          Length = 386

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 16/97 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G ++ ++ A + A+  +  P+                 K        
Sbjct: 117 KKLFKKAGVPVVPGQIVKTLQAVDMAVSKIGLPMIA---------------KPDNGVGAA 161

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT-GSRVN 104
           G     + + V    +E    T+   +     G    
Sbjct: 162 GTYKLETTEDVEQFKQEWDKQTVYFFEKFVDSGQICT 198


>gi|315638721|ref|ZP_07893895.1| phosphoribosylamine-glycine ligase [Campylobacter upsaliensis JV21]
 gi|315481345|gb|EFU71975.1| phosphoribosylamine-glycine ligase [Campylobacter upsaliensis JV21]
          Length = 416

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+++ +  A+ +  S    A   I++L  P  VVK+     G+              
Sbjct: 106 KEFLQRHKIKTARFINTSDFKEACEFIESL-TPPIVVKADGLCAGK-------------- 150

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S +       ++L      +  G  G     + VE+  D
Sbjct: 151 GVIIAKSKEEATQVAAKML----SGESFGEAG---RKIVVEEFLD 188


>gi|311745502|ref|ZP_07719287.1| carbamoyl-phosphate synthase, large subunit [Algoriphagus sp. PR1]
 gi|311302392|gb|EFQ79218.1| carbamoyl-phosphate synthase, large subunit [Algoriphagus sp. PR1]
          Length = 939

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L++K  V V +G   +S    +   + +  PL +  S    G    G F         
Sbjct: 134 KELMKKIGVSVCEGSTATSFLQGKEIAQEIGFPLIIRASYTLGG--AGGAFV-------- 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                        D  ++L         G   S V+ V +E      +E  L ++ D   
Sbjct: 184 ---------EKAEDFEKLL-------SAGLQASPVHEVLIEQSILGWKEYELEVMRDNIG 227

Query: 129 GMVAF 133
            M+  
Sbjct: 228 NMIVI 232



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 15/77 (19%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++ +VP  +   + +   A    KT+  PL V  S +  G                G+
Sbjct: 679 LLKENDVPYPEFGTVHTTDEALELCKTIGFPLLVRPSYVLGG---------------QGM 723

Query: 71  RVESSLKSVISDIREIL 87
           ++  + K +   + ++L
Sbjct: 724 KIVINEKELEEHVVDVL 740


>gi|257082350|ref|ZP_05576711.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis E1Sol]
 gi|256990380|gb|EEU77682.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis E1Sol]
          Length = 415

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGVSGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 EVYPMVIA 211


>gi|94266401|ref|ZP_01290098.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [delta proteobacterium MLMS-1]
 gi|94268346|ref|ZP_01291150.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [delta proteobacterium MLMS-1]
 gi|93451648|gb|EAT02437.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [delta proteobacterium MLMS-1]
 gi|93452996|gb|EAT03490.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [delta proteobacterium MLMS-1]
          Length = 1077

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  +RK  + V +  +I ++  A++A   +  P+ V  S    G  G   + +   +   
Sbjct: 133 REAMRKIGIKVPQSEIIHTLSEAKAAAAEIGFPIIVRPSYTLGGTGGGIAYNQQELEKLC 192

Query: 69  GVRVESSLKSVISDIREILG 88
              ++ SL S +   + +LG
Sbjct: 193 ITGLDLSLNSEVMLEKSLLG 212


>gi|152978819|ref|YP_001344448.1| phosphoribosylamine--glycine ligase [Actinobacillus succinogenes
           130Z]
 gi|150840542|gb|ABR74513.1| phosphoribosylamine--glycine ligase [Actinobacillus succinogenes
           130Z]
          Length = 429

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTDVEQALAYVREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      I+++L         G  G   + V +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLNEAEDAIKDML----SGNVFGEAG---SRVVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|327310708|ref|YP_004337605.1| Lysine biosynthesis enzyme LysX [Thermoproteus uzoniensis 768-20]
 gi|326947187|gb|AEA12293.1| Lysine biosynthesis enzyme LysX [Thermoproteus uzoniensis 768-20]
          Length = 267

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 23/197 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+  VP  +  +   +  A  A + L  P+ +VK    + GR               V 
Sbjct: 82  LRRAGVPTPRTALAFGLEPALKAAEALGYPV-IVKPLDGSWGR--------------LVS 126

Query: 72  VESSLKSVISDI------REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +  S   + S +         +   L+ +     G  +    V   A      Y S    
Sbjct: 127 LAKSPDDLASIVAHKRHLESSMQEFLVQEYVEKPGRDIRVTVVAGRAVAAIYRYSSSDWR 186

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKI--FKLLIDPLIGVTSEDVASLCDMLELQGQA 183
             +         +   ++EE++    + +      ID +       V  +  + E +   
Sbjct: 187 TNTARGGKAEPVEIDGELEEISVKAAEAVGAMYAGIDVVESRDGYKVLEVNGVPEFKNVQ 246

Query: 184 RIDGGDLFPNLYKAFCD 200
           R+ G D+   + +A  +
Sbjct: 247 RVTGVDVAGAIAEAVLE 263


>gi|307152494|ref|YP_003887878.1| acetyl-CoA carboxylase, biotin carboxylase [Cyanothece sp. PCC
           7822]
 gi|306982722|gb|ADN14603.1| acetyl-CoA carboxylase, biotin carboxylase [Cyanothece sp. PCC
           7822]
          Length = 448

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  +++  VP   G   +I S   A+     +  P+ + K+    GGRG
Sbjct: 120 AKKTMQRAGVPTIPGSGGLIDSEKQAKEIAAQIGYPVLI-KATAGGGGRG 168


>gi|149194767|ref|ZP_01871862.1| acetyl-CoA carboxylase subunit A [Caminibacter mediatlanticus TB-2]
 gi|149135190|gb|EDM23671.1| acetyl-CoA carboxylase subunit A [Caminibacter mediatlanticus TB-2]
          Length = 447

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AK +++   VPV  G    I  +  A+   + +  P+ ++K+
Sbjct: 121 AKEVMKSAGVPVIPGSEGAIKDIEEAKKVAREIGYPV-ILKA 161


>gi|330989059|gb|EGH87162.1| urea amidolyase-like protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 1230

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   +         
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPDGMADELCAAAIKLARAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|293400959|ref|ZP_06645104.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305985|gb|EFE47229.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 1066

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++   +L K ++P   G    +V  A      +  P+ V  S +  GGR     + + 
Sbjct: 668 HEFE--EMLHKLDIPQPMGETAVTVEEALVIANKIGYPVLVRPSYVL-GGRAM---EIVH 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            D    + + +++K +  D   ++   ++ K+ 
Sbjct: 722 NDDDLKIYMATAVKEISHDAPILVDKYIVGKEM 754



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ +   PV + V++ ++  A +       P+ V
Sbjct: 133 RELMYEIGEPVPESVIVHTIEEAVAFASDNGYPVVV 168


>gi|260770648|ref|ZP_05879579.1| phosphoribosylamine--glycine ligase [Vibrio furnissii CIP 102972]
 gi|260614374|gb|EEX39562.1| phosphoribosylamine--glycine ligase [Vibrio furnissii CIP 102972]
          Length = 430

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|257054669|ref|YP_003132501.1| phosphoribosylaminoimidazole carboxylase [Saccharomonospora viridis
           DSM 43017]
 gi|256584541|gb|ACU95674.1| phosphoribosylaminoimidazole carboxylase [Saccharomonospora viridis
           DSM 43017]
          Length = 392

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 57/194 (29%), Gaps = 46/194 (23%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  L     PV     I+ V       ++   P+ V+K+                     
Sbjct: 111 RERLAAQGFPVPAFAAITGVDDVLKFGESHAWPV-VLKA-------------ATGGYDGR 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV + +S     + + E+L +                + VE    + RE  LS LV R  
Sbjct: 157 GVWMVASPDEARALVPELLDAG-------------TRLLVEQKVAMRRE--LSALVAR-- 199

Query: 129 GMVAFIASTQG-GMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQ 180
                  S  G G     V       I   ++ P  G+T        E    +   L + 
Sbjct: 200 -------SPFGQGSAWPVVETVQRNGINTEVLAPAPGLTEQRTQQAQELALRIAAELGVV 252

Query: 181 GQARIDGGDLFPNL 194
           G   ++  D    L
Sbjct: 253 GVLAVELFDTDDGL 266


>gi|297190800|ref|ZP_06908198.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722581|gb|EDY66489.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 716

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 6/101 (5%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + KA+   Y +P     +  +   A +    +  P+ +         +      ++   S
Sbjct: 30  EGKAVTDAYGIPTPAEGLAETADEAVALADRIGFPVAMKIVSPGILHKTDAGGVQVGLKS 89

Query: 67  KGGVRVESSL----KSVISDIREILGSTLITKQTGPTGSRV 103
              VR   +              ILG  +  +Q  P+G+ V
Sbjct: 90  CAEVRGAFTAIVSNAKAYDPEARILGVQV--QQMVPSGTEV 128


>gi|189240108|ref|XP_972976.2| PREDICTED: similar to glycinamide ribonucleotide
           synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Tribolium castaneum]
 gi|270011705|gb|EFA08153.1| hypothetical protein TcasGA2_TC005772 [Tribolium castaneum]
          Length = 999

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 27/134 (20%)

Query: 5   EYQ---AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           EY    AKA + K+ +P A+     + + A+  I +   P  VVK+   A G+       
Sbjct: 104 EYDKDWAKAFMDKHGIPTARWKSFKNGNEAKKFINSADFPALVVKASGLAAGK------- 156

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                  GV V +S +   + + EI        + G  G     V +E+      E+ + 
Sbjct: 157 -------GVVVAASKQEACAAVDEI------QSRFGTAG---ETVVIEELLT-GEEVSVL 199

Query: 122 LLVDRTSGMVAFIA 135
              D  +      A
Sbjct: 200 AFCDGNTVKPMLPA 213


>gi|119872790|ref|YP_930797.1| lysine biosynthesis enzyme LysX [Pyrobaculum islandicum DSM 4184]
 gi|119674198|gb|ABL88454.1| L-2-aminoadipate N-acetyltransferase [Pyrobaculum islandicum DSM
           4184]
          Length = 282

 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 61/155 (39%), Gaps = 30/155 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+  VP  +  ++  + AA+S  + L  P+ ++K    + GR               V 
Sbjct: 97  LREAGVPTPRTYLVFGLEAAKSVARRLSYPV-IIKPTDGSWGRF--------------VS 141

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCV--YVE-DGADILRELYLSLLVDRTS 128
           +  S++         L + ++ +Q   +   +  V  YVE  G DI     ++++ +R  
Sbjct: 142 LAKSVED--------LETVILHRQAMESDLHIYLVQEYVEKPGRDIR----VTVVGERAV 189

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
             +  I ST    +     +  P KI   L D  +
Sbjct: 190 AAIYRIVSTDWRTNTARGGRAEPVKIDPELEDIAV 224


>gi|323702767|ref|ZP_08114427.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532284|gb|EGB22163.1| acetyl-CoA carboxylase, biotin carboxylase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 449

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 5   EYQA-KALLR----KYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           EY   KAL R    +  VPV  G    I  V  A    + +  P+ + K+    GGRG
Sbjct: 111 EYMGNKALARSTMIEAGVPVVPGSEGAIKDVEEALKVAQEIGYPVLI-KASAGGGGRG 167


>gi|315654564|ref|ZP_07907470.1| phosphoribosylamine-glycine ligase [Mobiluncus curtisii ATCC 51333]
 gi|315491028|gb|EFU80647.1| phosphoribosylamine-glycine ligase [Mobiluncus curtisii ATCC 51333]
          Length = 420

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG---KGRFKELPA 64
           AK ++++  V  A  V   ++  A  A++    P YVVK    A G+G      F     
Sbjct: 106 AKTIMQQARVATAASVACRTLEEARGALQRFGSP-YVVKQDGLAAGKGVVVTSDFYVALT 164

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
            +   +   ++       I E L
Sbjct: 165 HAAACIEAVANPHEPAVVIEEFL 187


>gi|262198091|ref|YP_003269300.1| phosphoribosylamine/glycine ligase [Haliangium ochraceum DSM 14365]
 gi|262081438|gb|ACY17407.1| phosphoribosylamine/glycine ligase [Haliangium ochraceum DSM 14365]
          Length = 428

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 69/238 (28%), Gaps = 36/238 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K    ++ +  A   V S++   ++A+  L   G   VVK+   A G+           
Sbjct: 104 SKQFFARHGIRSAAFRVCSAMDEVDAALSQLAGAGVGVVVKADGLAAGK----------- 152

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV V S         R +L       + G  G     + +E          LS++  
Sbjct: 153 ---GVVVCSDAAQAREAARAML-------EDGRFGDAGARILIEQRLRGRE---LSVMAI 199

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                   +A  +    + +     P       + P   +      +L   +     A  
Sbjct: 200 TDGKRFEILAQAEDHKALLDGDHG-PNTGGMGTVSPPSWLAGAHGEALMQRI-----ADE 253

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELR 243
                   L  A    D   +    L+I   G   +L+    F D        +  LR
Sbjct: 254 VFAPTLRGL--AAEQLDYRGVLYAGLMIDPEGEPWLLEYNCRFGDPET--QPVLARLR 307


>gi|283795621|ref|ZP_06344774.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. M62/1]
 gi|291077292|gb|EFE14656.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. M62/1]
          Length = 1088

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 64/220 (29%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +     P     V++    A    KT+  P+ V  +    G             + G
Sbjct: 133 KDTMESIGQPCVPSKVVNETEDALEFAKTIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    S + +    R  L  +            ++ + VE G    +E+   ++ DRT 
Sbjct: 180 GI--ADSEEELREIARNGLALS-----------PIHQILVEKGISGWKEIEFEVIRDRTG 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +           +E            ++I P + +   +          + D L+++G
Sbjct: 227 NCITV-------CSMENFDPVGIHTGDSIVIAPAVTLADREYQMLRSAALRIVDTLQVEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
                      +   A  + +  +   + L     G    
Sbjct: 280 GCNCQFALNPESFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|189499597|ref|YP_001959067.1| Carbamoyl-phosphate synthetase large chain domain-containing
           protein [Chlorobium phaeobacteroides BS1]
 gi|189495038|gb|ACE03586.1| Carbamoyl-phosphate synthetase large chain domain protein
           [Chlorobium phaeobacteroides BS1]
          Length = 618

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 38/202 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALLR+ ++P        S   A+     +  P+ V  S +  G                 
Sbjct: 214 ALLRELDIPHPDYDTAVSFEEAQEITSRIGYPVLVRPSYVLGG---------------RA 258

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S  S+   + + L       +  P       + ++   +   E  +  L D T  
Sbjct: 259 MKIIYSDDSLKEYVDQALF----ISEKFP-------LLIDRFLETAVEFDIDALADSTDC 307

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGG 188
           +V+ +        I          +    IDP +I    E    L + L++ G       
Sbjct: 308 IVSGMMQHVEAAGIHSGDSTS--ILPYHNIDPGVIKTMKEYTRRLAESLKVVG------- 358

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               N+  A  +  + ++E+NP
Sbjct: 359 --LMNVQYAVQNNSVYVIEVNP 378


>gi|315163718|gb|EFU07735.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX1302]
          Length = 372

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKAAAKRALVAMMEDQQFGVSGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|311281440|ref|YP_003943671.1| phosphoribosylamine/glycine ligase [Enterobacter cloacae SCF1]
 gi|308750635|gb|ADO50387.1| phosphoribosylamine/glycine ligase [Enterobacter cloacae SCF1]
          Length = 429

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHRIPTAEYQNFTDVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|270489393|ref|ZP_06206467.1| acetyltransferase, GNAT family [Yersinia pestis KIM D27]
 gi|270337897|gb|EFA48674.1| acetyltransferase, GNAT family [Yersinia pestis KIM D27]
          Length = 649

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y +      + S    A    + L  P+ +         + +    
Sbjct: 250 LDTHEVQ--PILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 298

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 299 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 354

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++ ++     + +     + 
Sbjct: 355 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMVLARYLIIQAVKGGKIR 409

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 410 SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 452


>gi|325205096|gb|ADZ00550.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           M01-240355]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|304388787|ref|ZP_07370843.1| phosphoribosylamine-glycine ligase [Neisseria meningitidis ATCC
           13091]
 gi|304337239|gb|EFM03417.1| phosphoribosylamine-glycine ligase [Neisseria meningitidis ATCC
           13091]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|218290464|ref|ZP_03494584.1| carbamoyl-phosphate synthase, large subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239485|gb|EED06680.1| carbamoyl-phosphate synthase, large subunit [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 1082

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ALL +  +   +G  +++V AA  A ++L  P+ V  S +  G
Sbjct: 683 ALLTQLGIQRPEGRTVTTVEAAVEAAESLGYPVLVRPSYVLGG 725


>gi|116619159|ref|YP_821315.1| phosphoribosylamine--glycine ligase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222321|gb|ABJ81030.1| phosphoribosylamine--glycine ligase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 402

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK    K  +P A+   +     A +A+     P+ V+K+   A G+G
Sbjct: 99  AKNFFMKSGIPTARYEAVDDPQQARAALSRFGFPV-VLKADGLAAGKG 145


>gi|115372760|ref|ZP_01460066.1| D-alanine--D-alanine ligase [Stigmatella aurantiaca DW4/3-1]
 gi|115370241|gb|EAU69170.1| D-alanine--D-alanine ligase [Stigmatella aurantiaca DW4/3-1]
          Length = 280

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 24/121 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +   + +P           +A  A  TLP    VV              K     S 
Sbjct: 75  AKWIFTTHGIPTPPYKTFKDATSAREAADTLPFSYPVV-------------VKPSREGSS 121

Query: 68  GGVRVESSLK---SVISDIREILGSTLITKQTGPTGSRVN-CVYVEDG-----ADILREL 118
            GV V  + +   + + D     G+ L+  +    G  V   V  ++        + RE 
Sbjct: 122 VGVHVCKTKEAYLAAVEDAARYAGTLLV--EQFIPGREVQGAVLDDEALGVIEVVVAREF 179

Query: 119 Y 119
           Y
Sbjct: 180 Y 180


>gi|62086815|dbj|BAD92014.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Iguana iguana]
          Length = 866

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA L +Y++P A+    ++   A + I   P P  VVK+   A G+             
Sbjct: 90  SKAFLDRYDIPTARWKAFTNAEEACAFITRAPFPALVVKASGLAAGK------------- 136

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V ++       + EI+
Sbjct: 137 -GVIVATNKAEACKAVHEIM 155


>gi|325694685|gb|EGD36592.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           sanguinis SK150]
          Length = 1059

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++    G   ++   A  A + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIQQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGG 714



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G             + G
Sbjct: 133 KQLMEELGQPIPESEIVNTVDEALEFAAGIGYPVIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G+   S+ + +       L  + +T+ 
Sbjct: 180 GI--CSNEEELQEIAENGLKLSPVTQC 204


>gi|315657529|ref|ZP_07910411.1| phosphoribosylamine-glycine ligase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492001|gb|EFU81610.1| phosphoribosylamine-glycine ligase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 420

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG---KGRFKELPA 64
           AK ++++  V  A  V   ++  A  A++    P YVVK    A G+G      F     
Sbjct: 106 AKTIMQQARVATAASVACRTLEEARGALQRFGSP-YVVKQDGLAAGKGVVVTSDFYVALT 164

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
            +   +   ++       I E L
Sbjct: 165 HAAACIEAVANPHEPAVVIEEFL 187


>gi|312879916|ref|ZP_07739716.1| phosphoribosylamine/glycine ligase [Aminomonas paucivorans DSM
           12260]
 gi|310783207|gb|EFQ23605.1| phosphoribosylamine/glycine ligase [Aminomonas paucivorans DSM
           12260]
          Length = 425

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 22/122 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P +     +S+ A   A++    P YVVK+   A G+             
Sbjct: 106 SKEFMERHGIPTSSFERCTSLPACAEALRR-RTPPYVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G  V  +L+  +   R +L         G  G+ V    VED  +      L++   RT
Sbjct: 152 -GAFVIPTLEEALDTCRSLLE----EHALGAAGATV---VVEDFVEGFEITALAVTDGRT 203

Query: 128 SG 129
             
Sbjct: 204 IR 205


>gi|284009061|emb|CBA76029.1| phosphoribosylamine--glycine ligase [Arsenophonus nasoniae]
          Length = 427

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A     + V  A + +  +  P+ V+K+   A G+              
Sbjct: 109 KDFLTRHHIPTAAYQNFTEVEPALAYLDKIGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L            G   + + +E+  D   E    ++VD  +
Sbjct: 154 GVVVAMTLEEAKNAVQDMLAGNTF-------GQAGHRIVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VIPM 209


>gi|161528796|ref|YP_001582622.1| lysine biosynthesis enzyme LysX [Nitrosopumilus maritimus SCM1]
 gi|160340097|gb|ABX13184.1| lysine biosynthesis enzyme LysX [Nitrosopumilus maritimus SCM1]
          Length = 285

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           LL+K  VP  K     +  +A   ++    P  V+K  I + GRG
Sbjct: 97  LLKKAGVPTPKTYFSFTSESAAENLEKAGYP-LVIKPVIGSWGRG 140


>gi|145629966|ref|ZP_01785748.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae R3021]
 gi|144984247|gb|EDJ91670.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae R3021]
          Length = 394

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A   ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALVYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|115705965|ref|XP_001204293.1| PREDICTED: similar to ATP-citrate synthase, partial
           [Strongylocentrotus purpuratus]
 gi|115757407|ref|XP_789338.2| PREDICTED: similar to ATP-citrate synthase, partial
           [Strongylocentrotus purpuratus]
          Length = 146

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 37/116 (31%), Gaps = 18/116 (15%)

Query: 37  TLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQT 96
            L     VVK       RGK    +L  D     +             ++    L+    
Sbjct: 46  WLQSEPLVVKPDQGLKRRGKLGLLKLNTDLTTARKWI---------AEKMEEDLLVDGVN 96

Query: 97  GPTGSRVNCVYVEDGADIL---RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKD 149
           G    R+    +E          E Y+S+  +  +     +   QGG+D+ +V + 
Sbjct: 97  G----RLRQFIIEPFVKHDPSSDEYYVSIYSEMDAD--VVLFHHQGGVDVGDVGEK 146


>gi|315425442|dbj|BAJ47106.1| acetyl-CoA synthetase (ADP-forming), alpha and beta subunit
           [Candidatus Caldiarchaeum subterraneum]
          Length = 703

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 78/226 (34%), Gaps = 39/226 (17%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LLR Y V  A+  ++ +V  A +A + L  P  V+K             K       GGV
Sbjct: 497 LLRVYGVEPAEERLVYNVDDALAAAEELGYP-LVMKI---------ASEKISHKSDLGGV 546

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
            +  +     ++    L +          G     V  E    +  EL LS   D + G 
Sbjct: 547 VLGINTSEAAAEAFNKLMNLAKRLGVADDG----VVLQETWTGL--ELLLSTKTDPSMGP 600

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----------ELQ 180
           V  +    GG+  E         +++ +I     VT E+  ++ D L           + 
Sbjct: 601 VVTVG--LGGVYTE---------LWRDIITYAAPVTEEEALNMLDSLQHVRILNGYRNIP 649

Query: 181 GQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSK 225
              R     L         +   ++ LEINPL I     ++ +D +
Sbjct: 650 PINRRMIAKLIVRFSSIIPENPSINQLEINPLTIRGE-NVKAVDIR 694


>gi|282866205|ref|ZP_06275252.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. ACTE]
 gi|282558989|gb|EFB64544.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. ACTE]
          Length = 1102

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A+     +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAEAKGIADEIGYPVLVRPSYVL-GGRG 727


>gi|298489651|ref|YP_003719828.1| acetyl-CoA carboxylase biotin carboxylase ['Nostoc azollae' 0708]
 gi|298231569|gb|ADI62705.1| acetyl-CoA carboxylase, biotin carboxylase ['Nostoc azollae' 0708]
          Length = 448

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 22/129 (17%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK--------- 56
           AK  ++K  VP   G   ++ S    +   K +  P+ ++K+    GGRG          
Sbjct: 120 AKETMQKAGVPTVPGSDGLVESDQEGKLIAKDIGYPV-MIKATAGGGGRGMRLVLSEDEF 178

Query: 57  ------GRFKELPADSKGGVRVESSLKSVISDIREIL----GSTLITKQTGPTGSRVNCV 106
                  + +   A    GV +E S++       +IL    G+ +   +   +  R N  
Sbjct: 179 VKLFLAAQGEAGAAFGNAGVYIEKSIERPRHIEFQILADSYGNVIHLGERDCSIQRRNQK 238

Query: 107 YVEDGADIL 115
            +E+     
Sbjct: 239 LLEEAPSPA 247


>gi|219683623|ref|YP_002470006.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|219621273|gb|ACL29430.1| probable phosphoribosylglycinamide formyltransferase 2
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|289178392|gb|ADC85638.1| Phosphoribosylglycinamide formyltransferase [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 418

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 25/136 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P  K     S+   + A   +  P  VVK  + + G G+             VR    
Sbjct: 130 GLPTTKFEFAGSLQELKEAATRIGFPC-VVKPVMSSSGHGQSV-----------VRSADK 177

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           ++   ++ +        T +       V+ V +E   D+  E  L++L   +S  +    
Sbjct: 178 IEDAWNEAQ--------TGRRAHGEGDVSRVIIEQLVDLDYE--LTMLTVSSSAGIVVCE 227

Query: 134 -IASTQGGMDIEEVAK 148
            I   Q   D  +  +
Sbjct: 228 PIGQRQESGDYRDSWQ 243


>gi|206900471|ref|YP_002250759.1| acetyl-CoA carboxylase, biotin carboxylase [Dictyoglomus
           thermophilum H-6-12]
 gi|206739574|gb|ACI18632.1| acetyl-CoA carboxylase, biotin carboxylase [Dictyoglomus
           thermophilum H-6-12]
          Length = 449

 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK L+++  VP+  G   +I     A    K +  P+ +               K     
Sbjct: 121 AKKLMKEAGVPLLPGSEGLIEDEKQALRVAKEIGFPVLI---------------KATAGG 165

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S + ++ +IR  L      K  G  G     VY+E   +  R + + +L D
Sbjct: 166 GGKGMRISYSPEELVKNIR--LAKMEAEKNFGNPG-----VYIEKFIEEPRHVEIQILGD 218

Query: 126 RTSGMVAF 133
           +   +V+ 
Sbjct: 219 QYGNIVSL 226


>gi|322391730|ref|ZP_08065197.1| carbamoyl-phosphate synthase, large subunit [Streptococcus peroris
           ATCC 700780]
 gi|321145440|gb|EFX40834.1| carbamoyl-phosphate synthase, large subunit [Streptococcus peroris
           ATCC 700780]
          Length = 1058

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A  A   +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLDIPQPPGQTATNEEEAVLAASKIGFPVLVRPSYVLGG 714


>gi|317487436|ref|ZP_07946223.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316921295|gb|EFV42594.1| CoA binding domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 716

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E +A+ +LR Y V +A   + ++   A    + + G   +         +       
Sbjct: 501 NLVETEAREVLRAYGVDLAPHYLAATADEAAEMWEKIGGKAVMKIVSPDILHKTDAGGVA 560

Query: 62  LPADSKGGVRVES 74
           L  +S G  R   
Sbjct: 561 LNIESAGAAREAF 573


>gi|307322648|ref|ZP_07601982.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Sinorhizobium meliloti AK83]
 gi|306891710|gb|EFN22562.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Sinorhizobium meliloti AK83]
          Length = 492

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 53/170 (31%), Gaps = 42/170 (24%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL    VPV    + ++    E A   +  P+                 K    +   
Sbjct: 199 RQLLEGAGVPVPAYRMATNAAEVERAAAEIGLPVI---------------LKPAVGNGSS 243

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GVR+    + +      +LG T    QT P       + VE+                 +
Sbjct: 244 GVRLCRDAEELAEHTVYLLGGT-YEWQTSP------RILVEEF----------------A 280

Query: 129 GMVAFIASTQGGMDIEEVAKDY---PQKIFKLLIDPLIGVTSEDVASLCD 175
               F+A   G   IE  A ++   P  +++    P   +T +    + D
Sbjct: 281 QGPYFLADIMGNTIIEIGAGNFGPPPHFVYREYTYPAS-LTDDQRTRITD 329


>gi|300812995|ref|ZP_07093381.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300496029|gb|EFK31165.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
          Length = 1066

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +   KG  + +   A  A   L  P+ V  S +  G
Sbjct: 673 EILGKCQIDRPKGQTVFTAEEALKAANELGYPVLVRPSYVLGG 715



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L+ +   PVAK VV++ V  A +  K +  P+ V  +    G
Sbjct: 133 KNLMERIGEPVAKSVVVNYVEDAIAFAKEIGYPVVVRPAYTLGG 176


>gi|326789392|ref|YP_004307213.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           lentocellum DSM 5427]
 gi|326540156|gb|ADZ82015.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           lentocellum DSM 5427]
          Length = 1068

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 32/177 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  +V  A +  + L  P+                 +        G  +  +
Sbjct: 136 GIEMARSEVAYTVEEALAIAEQLGYPVV---------------LRPAYTMGGAGGGLVYN 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
              + +     L ++L           V  V VE+      EL L ++  R +       
Sbjct: 181 TDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDAKGNMITV 227

Query: 136 STQGGMDIEEVAKDYPQK---IFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                +D   V          +  +  D    +       + + +E+ G   +    
Sbjct: 228 CFIENIDPLGVHTGDSFCSAPMLTISEDVQKELQ-RQAYKIVEAIEVIGGTNVQFAR 283



 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +V  A +  K +  P+ V  S +  GGRG
Sbjct: 668 RAMMEKLEIPMPESGMAVNVEEALAIAKRIGYPVMVRPSYVL-GGRG 713


>gi|254672628|emb|CBA06393.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           alpha275]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|258511291|ref|YP_003184725.1| carbamoyl-phosphate synthase, large subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478017|gb|ACV58336.1| carbamoyl-phosphate synthase, large subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 1082

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ALL +  +   +G  +++V AA  A ++L  P+ V  S +  G
Sbjct: 683 ALLTQLGIQRPEGRTVTTVEAAVEAAESLGYPVLVRPSYVLGG 725


>gi|157143810|emb|CAL47318.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 11/92 (11%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + +        D+  
Sbjct: 1   WTMVAGGGASVVYADTIADMAGIDVLANYGEYSGGPTTGETKFYAETLFDLMTREKDALG 60

Query: 322 KGILINIFGGIMRCDVLVK---GILSAVKEVK 350
           +G ++ I G I     + K   GI+ A +  +
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIIQAFENYQ 92


>gi|60099689|gb|AAX12979.1| adenosine 3 [Drosophila affinis]
          Length = 459

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 14/81 (17%)

Query: 8  AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
          AK  + ++ +P A+    +  + A++ I+T P    VVK+   A G+             
Sbjct: 7  AKDFMLRHGIPTARYESFTDTNKAKAFIRTAPYQALVVKAAGLAAGK------------- 53

Query: 68 GGVRVESSLKSVISDIREILG 88
           GV V ++++     + EILG
Sbjct: 54 -GVVVAANVEEACQAVDEILG 73


>gi|325273607|ref|ZP_08139825.1| phosphoribosylamine--glycine ligase [Pseudomonas sp. TJI-51]
 gi|324101261|gb|EGB98889.1| phosphoribosylamine--glycine ligase [Pseudomonas sp. TJI-51]
          Length = 431

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLQEKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|255020864|ref|ZP_05292920.1| Phosphoribosylamine--glycine ligase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969655|gb|EET27161.1| Phosphoribosylamine--glycine ligase [Acidithiobacillus caldus ATCC
           51756]
          Length = 416

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 29/120 (24%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P A     + +  A + ++    P+ VVK+   A G+             
Sbjct: 109 AKAFMARHGLPTAAYGRFTGLDPARTFLRRQDLPV-VVKADGLASGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L        + L         GP       + +E   +     Y++++ D  
Sbjct: 155 -GVVVATTLAQAEQAAEKFLRQ-------GP-------ILIEAFLEGEEASYIAIVADGQ 199


>gi|158521457|ref|YP_001529327.1| carbamoyl phosphate synthase large subunit [Desulfococcus
           oleovorans Hxd3]
 gi|158510283|gb|ABW67250.1| carbamoyl-phosphate synthase, large subunit [Desulfococcus
           oleovorans Hxd3]
          Length = 1066

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + +A+   +++V  AE   + +  P+ +  +    G                
Sbjct: 133 KNTMERLGIEMARSRTVTTVEDAEKVAEEIGYPVVIRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +++ +       L +++           VN V VE+      EL L ++ D  +
Sbjct: 178 GGGFVYNVEELRVIAARGLAASM-----------VNQVLVEESVLGWEELELEVVRDAKN 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 QKITV 231



 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +++   +P  +  + S++  A      +  PL V  S +  G
Sbjct: 671 RQVMQDLGIPQPESGMASTLDQALEIAARIGYPLMVRPSYVLGG 714


>gi|86608860|ref|YP_477622.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|86557402|gb|ABD02359.1| acetyl-CoA carboxylase, biotin carboxylase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 451

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+  ++   VP   G   +I+S   A    + +  P+ ++K+    GGRG
Sbjct: 121 ARETMQAVGVPTVPGSRGLITSEEEAVKLAEKIGYPV-IIKATAGGGGRG 169


>gi|218767260|ref|YP_002341772.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis Z2491]
 gi|20139756|sp|Q9JWU6|PUR2_NEIMA RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|121051268|emb|CAM07544.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis Z2491]
 gi|319411466|emb|CBY91882.1| phosphoribosylamine-glycine ligase (GARS; glycinamide
           ribonucleotide synthetase; phosphoribosylglycinamide
           synthetase) [Neisseria meningitidis WUE 2594]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|323333596|gb|EGA74989.1| Ade5,7p [Saccharomyces cerevisiae AWRI796]
          Length = 802

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A   V ++   A S ++      +V+K+   A G+G      +P+   
Sbjct: 113 SKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIAAGKG----VIIPSSIA 168

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
             V+    +        E  G  ++ +Q    G  ++ + + DG   
Sbjct: 169 ESVQAIKDIMVTKQFGEE-AGKQVVIEQFL-EGDEISLLTIVDGYSH 213


>gi|297623623|ref|YP_003705057.1| lysine biosynthesis enzyme LysX [Truepera radiovictrix DSM 17093]
 gi|297164803|gb|ADI14514.1| lysine biosynthesis enzyme LysX [Truepera radiovictrix DSM 17093]
          Length = 301

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 13/77 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP  +  V      A +  +    P+ V+K  + + GR   +  +          
Sbjct: 110 LARAGVPTPRTGVAFDTETALALAEDFGYPV-VLKPTVGSWGRMVSKLSD---------- 158

Query: 72  VESSLKSVISDIREILG 88
                   + + +E LG
Sbjct: 159 --RDALEAVLEHKETLG 173


>gi|317155013|ref|YP_004123061.1| phosphoribosylamine/glycine ligase [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316945264|gb|ADU64315.1| phosphoribosylamine/glycine ligase [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 425

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K ++R+  VP A   V      A + ++    P+ V+K+   A G+G
Sbjct: 106 SKTVMREAGVPTAPFRVFDEYDEAVAHVRKKGAPI-VIKADGLAAGKG 152


>gi|55980348|ref|YP_143645.1| sugar ABC transporter periplasmic sugar-binding protein [Thermus
           thermophilus HB8]
 gi|55771761|dbj|BAD70202.1| sugar ABC transporter, periplasmic sugar-binding protein [Thermus
           thermophilus HB8]
          Length = 417

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 11/77 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGKGRFKELPA 64
           K LL+K+ VPV       ++    +A K L     GP+Y    Q  A       F    +
Sbjct: 154 KDLLKKHGVPVPA-----TLEEFVAAAKKLSRAEGGPVY-WF-QPDASTFAYFFFNLGGS 206

Query: 65  DSKGGVRVESSLKSVIS 81
             K G  V +S ++V +
Sbjct: 207 YLKDGKLVLNSKEAVEA 223


>gi|15677964|ref|NP_275136.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis MC58]
 gi|20139757|sp|Q9JXA3|PUR2_NEIMB RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|7227409|gb|AAF42459.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis MC58]
 gi|316984514|gb|EFV63480.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis H44/76]
 gi|325139461|gb|EGC62001.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis CU385]
 gi|325201187|gb|ADY96642.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis H44/76]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|297529434|ref|YP_003670709.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp. C56-T3]
 gi|297252686|gb|ADI26132.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp. C56-T3]
          Length = 451

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  +R+  VP+  G   VI S+  A +  + +  P+ ++K+
Sbjct: 119 ARETMREAGVPIVPGSRGVIESLDEARAIAEEIGYPV-IIKA 159


>gi|60099663|gb|AAX12966.1| adenosine 3 [Drosophila pseudoobscura]
          Length = 459

 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 8  AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
          AK  + ++ +P A+    +  + A++ I++ P    VVK+   A G+             
Sbjct: 7  AKDFMLRHGIPTARYESFTDTNKAKAFIRSAPYQALVVKAAGLAAGK------------- 53

Query: 68 GGVRVESSLKSVISDIREILG 88
           GV V +++      + EILG
Sbjct: 54 -GVVVAANVDEACQAVDEILG 73


>gi|312127564|ref|YP_003992438.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777583|gb|ADQ07069.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 1075

 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 13/105 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K ++    G    ++  A     +L  P+ V  S +  G   K  F +        
Sbjct: 676 KILNKLSIKRPPGFTCYTLQEALEIANSLGYPVLVRPSYVLGGQGMKIAFDD-------- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 +  ++S  + +    ++       G  +    + DG DI
Sbjct: 728 ----DDIVEMLSYAKNLNDHPILID-KYIVGKEIEVDAISDGKDI 767



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K   PV    V++SV    +  K +  P+ +  +    G             + G
Sbjct: 133 KQLMIKIGEPVIPSEVVNSVEDGLAFAKKIGFPVIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ +  +   R  L  +            V+ + VE      +E+   ++  R S
Sbjct: 180 GI--ANNEEEFVEIARRGLSYS-----------PVHQILVEKSIKGWKEIEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                       +D   V       I   ++ P   ++ ++          + D L+++G
Sbjct: 225 NGCLITVCNMENIDP--VGIHTGDSI---VVAPSQTLSDKEYQMLRSSALKIIDALKIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
              +       +   A  + +  +   + L     G    
Sbjct: 280 GCNVQFALNPDSFEYAVIEVNPRVSRSSALASKATGYPIA 319


>gi|298370471|ref|ZP_06981787.1| phosphoribosylamine--glycine ligase [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298281931|gb|EFI23420.1| phosphoribosylamine--glycine ligase [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++KY +P A+     +   A   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMKKYGIPTAQYQTFENAEKAHEYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L      I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVVVAATLHEAHVAIDDML----LGNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGD 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|225011713|ref|ZP_03702151.1| carbamoyl-phosphate synthase, large subunit [Flavobacteria
           bacterium MS024-2A]
 gi|225004216|gb|EEG42188.1| carbamoyl-phosphate synthase, large subunit [Flavobacteria
           bacterium MS024-2A]
          Length = 949

 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  ++P  +  V  +   A      L  P+ V  S +  G                G+
Sbjct: 689 LLKDNDIPFPEFGVAQTADQAIELADGLDFPILVRPSYVLGG---------------QGM 733

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + K + + + ++L   
Sbjct: 734 KIVINKKELEAHVVDLLQKI 753


>gi|197123994|ref|YP_002135945.1| carbamoyl phosphate synthase large subunit [Anaeromyxobacter sp. K]
 gi|196173843|gb|ACG74816.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter sp.
           K]
          Length = 1067

 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 38/187 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  +  A+  + +++  A +A + L  PL V  +    G                
Sbjct: 133 KETMTRLGIETARSEIATTLEQAMAAGQRLGFPLVVRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +++ +       L ++            V+ V VE+      EL L ++ D   
Sbjct: 178 GGGFAYNVEELEEIAARGLLAS-----------PVSQVLVEESVLGWEELELEVVRDAKG 226

Query: 129 GMV--AFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTS---EDVASLCDMLELQGQ 182
             +   FI       +++ +             +     + +   +    + D +E+ G 
Sbjct: 227 RKITVCFI------ENVDAMGVHTGDSYCTAPMLTISPELQARLQDQAYRIVDAIEVIGG 280

Query: 183 ARIDGGD 189
             +    
Sbjct: 281 TNVQFAH 287


>gi|156394457|ref|XP_001636842.1| predicted protein [Nematostella vectensis]
 gi|156223949|gb|EDO44779.1| predicted protein [Nematostella vectensis]
          Length = 711

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 43/220 (19%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K+++    VP+ +G      SV   +   + +  P+ ++K+    GG+           
Sbjct: 152 SKSIMSDAGVPIIQGYHGEDQSVERLQQEAERIGYPV-MLKAVRGGGGK----------- 199

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+ +S       +      ++ +          + + VE   +  R + + +  D
Sbjct: 200 ---GMRIVNSPDEFHEMLESAKNESIKSFND-------DSMLVEKFVETPRHVEVQVFGD 249

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLE 178
           R   +V          + +   +   QKI +    P  GV+        E        + 
Sbjct: 250 RQGNVVYLY-------ERDCSVQRRHQKIIEEA--PAPGVSDEVRRSIGEAAVRAAKAVG 300

Query: 179 LQGQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
             G   ++   D   N Y  F + +  L   +P+  M  G
Sbjct: 301 YFGAGTVEFIMDSSQNFY--FMEMNTRLQAKHPITEMITG 338


>gi|46198319|ref|YP_003986.1| sugar ABC transporter, periplasmic sugar-binding protein, putative
           [Thermus thermophilus HB27]
 gi|46195941|gb|AAS80359.1| sugar ABC transporter, periplasmic sugar-binding protein, putative
           [Thermus thermophilus HB27]
          Length = 417

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 11/77 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGKGRFKELPA 64
           K LL+K+ VPV       ++    +A K L     GP+Y    Q  A       F    +
Sbjct: 154 KDLLKKHGVPVPA-----TLEEFVAAAKKLSRAEGGPVY-WF-QPDASTFAYFFFNLGGS 206

Query: 65  DSKGGVRVESSLKSVIS 81
             K G  V +S ++V +
Sbjct: 207 YLKDGKLVLNSKEAVEA 223


>gi|148253229|ref|YP_001237814.1| phosphoribosylamine--glycine ligase [Bradyrhizobium sp. BTAi1]
 gi|146405402|gb|ABQ33908.1| phosphoribosylamine--glycine ligase [Bradyrhizobium sp. BTAi1]
          Length = 427

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 26/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y +P        +   A + ++    P+ VVK+   A G+              
Sbjct: 107 KDLCAEYGIPTGAYCRFDNAPEALAYVREHGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R +          G  G     V +E+  +  RE+    L D  +
Sbjct: 152 GVVVAKTLAEAEDAVRMMF--------EGGFGVAGTEVVIEEFLE-GREVSFFALCDGQT 202

Query: 129 GMVAFIASTQG 139
            +   +AS Q 
Sbjct: 203 AIP--LASAQD 211


>gi|323492064|ref|ZP_08097226.1| phosphoribosylamine--glycine ligase [Vibrio brasiliensis LMG 20546]
 gi|323313625|gb|EGA66727.1| phosphoribosylamine--glycine ligase [Vibrio brasiliensis LMG 20546]
          Length = 429

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVRQQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGAS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|312112027|ref|YP_003990343.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y4.1MC1]
 gi|311217128|gb|ADP75732.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y4.1MC1]
          Length = 1041

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 77/217 (35%), Gaps = 49/217 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +I++V  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMYELGEPVPESEIITNVDEAVAFAEKIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  I+ + + L  + IT+             +E      +E+   ++ D T+
Sbjct: 180 GI--AETMEQFIALVEKGLAESPITQC-----------LIERSVAGYKEIEYEVMRDNTN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRTSAIKIISALGIIG 279

Query: 182 QARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I    D F   Y         L+E+NP +   + 
Sbjct: 280 GCNIQFALDPFSKRY--------YLIEVNPRVSRSSA 308


>gi|121534866|ref|ZP_01666685.1| cyanophycin synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306465|gb|EAX47388.1| cyanophycin synthetase [Thermosinus carboxydivorans Nor1]
          Length = 885

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 30/173 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    + V +GV++++   A  A +    P+ V+K     G +GKG           
Sbjct: 219 KQVLAAGGITVPQGVIVTAAGQAVKAWEQFGAPV-VLKP--LRGNQGKGVTLN------- 268

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGS----RVNCVYVEDGADILRELYLSLLV 124
            V   + ++   +         ++ ++  P        VN   V     I     +   V
Sbjct: 269 -VHSAAEVERAFAFAAA-HDREVLVEEYIPGRQYRLCVVNGKMVAAAERIPA-YVVGDGV 325

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-------GVTSEDV 170
              + +VA + S      +     + P  + K+ IDP+        G+T  DV
Sbjct: 326 HTVAELVAIVNSD----PLRGEGHEKP--LTKISIDPIALTVLAKQGLTPADV 372


>gi|121635794|ref|YP_976039.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis FAM18]
 gi|120867500|emb|CAM11277.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis FAM18]
 gi|325131235|gb|EGC53947.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis M6190]
 gi|325137409|gb|EGC59997.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           ES14902]
 gi|325143386|gb|EGC65715.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           961-5945]
 gi|325199225|gb|ADY94681.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis G2136]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|116618307|ref|YP_818678.1| carbamoyl-phosphate synthase large subunit [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|122271493|sp|Q03WW7|CARB_LEUMM RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|116097154|gb|ABJ62305.1| carbamoyl-phosphate synthase large subunit [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 1059

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 75/213 (35%), Gaps = 41/213 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL+ + N P+ + ++ +++  + +   T   P+ V  +    G             + G
Sbjct: 133 KALMERLNEPIPESIIATTLEESLNFADTHGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +                 G   S V  V +E      +E+   ++ D  +
Sbjct: 180 GI--AQTHEELSEITAN-----------GLELSPVTQVLIERSIAGYKEIEFEVMRD-AN 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                +AS +   + + V       I    +    D  + +  +    +   L+++G   
Sbjct: 226 DNALVVASME---NFDPVGIHTGDSIVTAPVQTLSDREVQMMRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I    L P+ YK +       +E+NP +   + 
Sbjct: 283 IQMA-LDPDSYKYYI------IEVNPRVSRSSA 308


>gi|56420934|ref|YP_148252.1| acetyl-CoA carboxylase biotin carboxylase subunit [Geobacillus
           kaustophilus HTA426]
 gi|56380776|dbj|BAD76684.1| acetyl-CoA carboxylasesubunit (biotin carboxylasesubunit)
           [Geobacillus kaustophilus HTA426]
          Length = 451

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  +R+  VP+  G   VI S+  A +  + +  P+ ++K+
Sbjct: 119 ARETMREAGVPIVPGSRGVIESLDEARAIAEEIGYPV-IIKA 159


>gi|46849379|dbj|BAD17899.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Oryzias latipes]
          Length = 991

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ VP A+    S    A S I+    P  VVK+   A G+             
Sbjct: 94  AKAFMERHGVPTARYGSFSDPQEACSFIRRADFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V    +     + +I+
Sbjct: 141 -GVIVAKDQEEACQAVMDIM 159


>gi|33865088|ref|NP_896647.1| phosphoribosylamine--glycine ligase [Synechococcus sp. WH 8102]
 gi|33638772|emb|CAE07067.1| phosphoribosylglycinamide synthetase [Synechococcus sp. WH 8102]
          Length = 435

 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 15/86 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+R+  VP A    ++S   A + +  +  P  VVK+   A G+             
Sbjct: 118 AKQLMREAGVPTAGHWAVTSEADALAVLAEVGRP-LVVKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTLIT 93
            GV V  +++   + IR+       +
Sbjct: 164 -GVTVADTIEQAEAAIRDAFAGRFGS 188


>gi|229061492|ref|ZP_04198836.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH603]
 gi|228717726|gb|EEL69376.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH603]
          Length = 1018

 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|270284341|ref|ZP_05965945.2| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           gallicum DSM 20093]
 gi|270276675|gb|EFA22529.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           gallicum DSM 20093]
          Length = 495

 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 25/136 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +  + +  P  VVK  + + G G+             VR    
Sbjct: 204 GLPTTPYRFAGSLEELRAGAEQIGYPC-VVKPVMSSSGHGQSV-----------VRSADQ 251

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +   + +E        ++    G   + V VE   D+  E  L++L   +S  +    
Sbjct: 252 IDAAWKEAQE-------GRRAASEGDT-SRVIVEQLVDLDAE--LTMLTVASSAGIVTCE 301

Query: 134 -IASTQGGMDIEEVAK 148
            I   Q   D  E  +
Sbjct: 302 PIGQRQEDGDYRESWQ 317


>gi|261417742|ref|YP_003251424.1| acetyl-CoA carboxylase biotin carboxylase subunit [Geobacillus sp.
           Y412MC61]
 gi|319767446|ref|YP_004132947.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp.
           Y412MC52]
 gi|261374199|gb|ACX76942.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp.
           Y412MC61]
 gi|317112312|gb|ADU94804.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp.
           Y412MC52]
          Length = 451

 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  +R+  VP+  G   VI S+  A +  + +  P+ ++K+
Sbjct: 119 ARETMREAGVPIVPGSRGVIESLDEARAIAEEIGYPV-IIKA 159


>gi|296109112|ref|YP_003616061.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus
           infernus ME]
 gi|295433926|gb|ADG13097.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus
           infernus ME]
          Length = 506

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 72/212 (33%), Gaps = 39/212 (18%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK +++K  VP+  G    +  V  A    + +  P+ V               K     
Sbjct: 119 AKKIMKKAGVPLLPGSDGPVEDVDEAIEIAEAIGFPVVV---------------KASAGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+ V  S + +   I     + LI +         + +++E   +  R + + +L D
Sbjct: 164 GGMGMSVAYSKEELEKVIES---TKLIAQNAFGD----STIFIEKYLENPRHIEIQILGD 216

Query: 126 RTSGMVAFIASTQGGMDI--EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
           R  G +  +   +  +    +++ ++ P  I    +   +G   E        +      
Sbjct: 217 RF-GKIIHLGDRECSIQRRHQKLIEEAPSPIMTEELRERMG---ESAIKAGKAINYDSAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
            ++           + D +   LE+N  I ++
Sbjct: 273 TVEF---------LYQDGNFYFLEMNTRIQVE 295


>gi|226310125|ref|YP_002770019.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Brevibacillus brevis NBRC 100599]
 gi|226093073|dbj|BAH41515.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Brevibacillus brevis NBRC 100599]
          Length = 387

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 12/147 (8%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           R+  +PVA   V++S+   + A++ L  P  +  +    G  GKG++             
Sbjct: 119 REIGIPVAPFCVVNSLEDLQDAVRELGLPAVMKTA--TGGYDGKGQWVLRSEAELAEAYE 176

Query: 73  ESSLKSVISDIREI--LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
             S       + +       L           +    V +       L+LS++  R    
Sbjct: 177 TLSKAGAELIVEQFVPFQMELSVVAARNPAGELAVFPVSENIHQENILHLSIVPAR---- 232

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKL 157
                S +     EE+A+   +K+  +
Sbjct: 233 ----ISAEVAARAEEIARTIVEKLDVV 255


>gi|94969224|ref|YP_591272.1| carbamoyl-phosphate synthase large subunit [Candidatus Koribacter
           versatilis Ellin345]
 gi|166991300|sp|Q1IPK2|CARB_ACIBL RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|94551274|gb|ABF41198.1| carbamoyl-phosphate synthase large subunit [Candidatus Koribacter
           versatilis Ellin345]
          Length = 1102

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL + ++P   G   +S+  A +    +  P+ V  S +  G
Sbjct: 689 KLLEELDIPQPPGSTATSLEEAVANANKIGYPVLVRPSYVLGG 731


>gi|332284659|ref|YP_004416570.1| CoA-binding domain-containing protein [Pusillimonas sp. T7-7]
 gi|330428612|gb|AEC19946.1| CoA-binding domain-containing protein [Pusillimonas sp. T7-7]
          Length = 696

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 63/217 (29%), Gaps = 24/217 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    +PV    + ++      A + +  P+ +         + +     L   S+  VR
Sbjct: 492 LAAVGMPVVSHRLCATEDEVVQAWQAMESPIVLKGCSEKLPHKSEFGLVYLNLSSEQDVR 551

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
                         +    L++                      REL L   VD   G  
Sbjct: 552 KACQECESKMRALGLAPYFLVSPMMFGK----------------RELALGAKVDPRFG-P 594

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDML-ELQGQARIDGGD 189
             + S   G    E   DY   +    ID    G+ +  +A L                 
Sbjct: 595 VVMLS--DGGKFIESMPDYHLLVPPFSIDNACKGLKALRIAPLFHGARGEPPLPIECVAK 652

Query: 190 LFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDS 224
           L   L       + S+  I  NP+++   G + +LD+
Sbjct: 653 LAVQLGDIMLRNEDSIASIDLNPVLVDP-GHVVILDA 688


>gi|257451949|ref|ZP_05617248.1| phosphoribosylamine--glycine ligase [Fusobacterium sp. 3_1_5R]
 gi|317058499|ref|ZP_07922984.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 3_1_5R]
 gi|313684175|gb|EFS21010.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 3_1_5R]
          Length = 408

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  AK     +   A + I+    P  VVK+   A G+             
Sbjct: 92  SKDFMKKYGVKTAKYENFKNSKEALAYIEKQDYP-LVVKASGLAAGK------------- 137

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  SL+     ++EI    ++ K     G+ V    +E+  + +    LS+ 
Sbjct: 138 -GVIICQSLEEAKKAVQEI----MVDKVFQDAGAEV---VIEEFLEGVEASILSIT 185


>gi|242398199|ref|YP_002993623.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739]
 gi|242264592|gb|ACS89274.1| Acyl-CoA synthetase, subunit alpha [Thermococcus sibiricus MM 739]
          Length = 473

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 25/182 (13%)

Query: 224 SKISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATM 283
           +      +A+++   I    D    +     AK      +     IG + +G G  +   
Sbjct: 273 AGADIIYDAVFKQTGILRAEDF---EHMFDVAKAFAKCKLPKGDRIGIITDGGGAGVMAS 329

Query: 284 DIIKLYGGA---------------------PANFLDVGGGADQDKVAAAFKIITSDSSVK 322
           D +  +G                         N  DV G  D  +   A +   +D +V 
Sbjct: 330 DAVAKFGLKMAELSEEIIKYLKEHFPPHAVAGNPTDVVGDTDAQRYKYAIEAFVNDPNVD 389

Query: 323 GILINIFGGIMRCDVLVKGILSAVKEVKINIPLV-MRLEGANVDIGNRLIAESGLNVITA 381
            I+I +   +   +      + A    K   P+V + + G   +   +++   G+ V + 
Sbjct: 390 AIVIIVLFQVPLLNEEEIIEILAEYAKKSEKPIVAVAMGGKKTEYYAKMLENKGVPVYST 449

Query: 382 ID 383
            +
Sbjct: 450 PE 451


>gi|227495449|ref|ZP_03925765.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Actinomyces
           coleocanis DSM 15436]
 gi|226830996|gb|EEH63379.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Actinomyces
           coleocanis DSM 15436]
          Length = 1101

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 33/161 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
              VA+ V+  ++    +A   L  P+ V         R       L +          +
Sbjct: 140 GAEVARSVIAHTMEECLAAADVLGYPMVV---------RPSFTMGGLGSG------FAHN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            + +       L +++ ++           V +E+     +E+ L ++ DRT   +    
Sbjct: 185 EEELRRFAGAGLQNSITSE-----------VLLEESILGWKEIELEVVRDRTGRCIPI-- 231

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
                  IE V          + I P + +T E++ +L  +
Sbjct: 232 -----CSIENVDPMGVHTGDSITIAPALTLTEEELDNLVKI 267


>gi|261419031|ref|YP_003252713.1| carbamoyl phosphate synthase large subunit [Geobacillus sp.
           Y412MC61]
 gi|319765848|ref|YP_004131349.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y412MC52]
 gi|261375488|gb|ACX78231.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y412MC61]
 gi|317110714|gb|ADU93206.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y412MC52]
          Length = 1042

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 65/187 (34%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +++SV  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMHELGEPVPESEIVTSVEEAVAFAEQIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  ++ + +           G   S +    +E      +E+   ++ D+++
Sbjct: 180 GI--AENMEQFLALVEK-----------GLAESPIRQCLIERSVAGFKEIEYEVMRDQSN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRSSAVKIISALGIIG 279

Query: 182 QARIDGG 188
              I   
Sbjct: 280 GCNIQFA 286


>gi|154151324|ref|YP_001404942.1| pyruvate carboxylase subunit A [Candidatus Methanoregula boonei
           6A8]
 gi|153999876|gb|ABS56299.1| acetyl-CoA carboxylase, biotin carboxylase [Methanoregula boonei
           6A8]
          Length = 493

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +++K  VPV  G    I  +  A+     +  P+ +VK+    GG G          
Sbjct: 121 SKQMMKKAGVPVLPGTDDGIRDIDTAKKVAAEIGYPV-IVKASAGGGGIGM--------- 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               V  E++L+  I+    I  S             V   ++E
Sbjct: 171 --QIVNDEAALEEAITGSMRIARSAFGDPTVFIEKYLVKPRHIE 212


>gi|124809263|ref|XP_001348531.1| succinyl CoA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497427|gb|AAN36970.1| succinyl CoA ligase, putative [Plasmodium falciparum 3D7]
          Length = 973

 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 87/243 (35%), Gaps = 39/243 (16%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E+ +K +L+ Y++P+ +  +  +V   +        P  +         +        
Sbjct: 549 LNEFDSKVILQNYDIPIVQTRIFENVDDIKD-YDHFAFPCAM---------KIYSDKITH 598

Query: 63  PADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILR--ELY 119
             D  G +   ++ + +I   ++I  +    + +    G     V ++D  +I    E+ 
Sbjct: 599 KKDIGGVILNINNKEELIESYKKIYNNVKAHSLEKYFKG-----VTIQDMVNINDGIEVI 653

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCDM 176
           L    D   G V    S  GG  +E            LLI PL    +        +   
Sbjct: 654 LGYYYDNNFGPVLLFGS--GGSYVEIFKDSV------LLIPPLNFSYTHHTIKNTKIYKA 705

Query: 177 L--ELQGQARIDGGDLFPNLYKAFCDKDMSLL------EINPLIIMKNGRLRVLDSKISF 228
           L        + D   L   + K F +  + LL      +INPL +  + ++  LD++ + 
Sbjct: 706 LAGNYSRFTKCDMSKLITTIVK-FSELILDLLPYINECDINPLYVCGD-KIIALDARFTL 763

Query: 229 DDN 231
             N
Sbjct: 764 RKN 766


>gi|331092139|ref|ZP_08340969.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401911|gb|EGG81485.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 423

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A      +   A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFDNPEDALAYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ I    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTLEEAKDGVKSI----MLDKKFGTAG---NTMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKTMTSAQD 212


>gi|229013071|ref|ZP_04170236.1| Carbamoyl-phosphate synthase large chain [Bacillus mycoides DSM
           2048]
 gi|228748325|gb|EEL98185.1| Carbamoyl-phosphate synthase large chain [Bacillus mycoides DSM
           2048]
          Length = 1018

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|229168627|ref|ZP_04296349.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH621]
 gi|228614783|gb|EEK71886.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH621]
          Length = 1018

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|183602581|ref|ZP_02963946.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|241190654|ref|YP_002968048.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241196060|ref|YP_002969615.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218222|gb|EDT88868.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|240249046|gb|ACS45986.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250614|gb|ACS47553.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793643|gb|ADG33178.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 413

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 25/136 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P  K     S+   + A   +  P  VVK  + + G G+             VR    
Sbjct: 125 GLPTTKFEFAGSLQELKEAATRIGFPC-VVKPVMSSSGHGQSV-----------VRSADK 172

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           ++   ++ +        T +       V+ V +E   D+  E  L++L   +S  +    
Sbjct: 173 IEDAWNEAQ--------TGRRAHGEGDVSRVIIEQLVDLDYE--LTMLTVSSSAGIVVCE 222

Query: 134 -IASTQGGMDIEEVAK 148
            I   Q   D  +  +
Sbjct: 223 PIGQRQESGDYRDSWQ 238


>gi|26991503|ref|NP_746928.1| phosphoribosylamine--glycine ligase [Pseudomonas putida KT2440]
 gi|37999613|sp|Q88DK2|PUR2_PSEPK RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|24986584|gb|AAN70392.1|AE016681_1 phosphoribosylamine--glycine ligase [Pseudomonas putida KT2440]
          Length = 431

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHEIPTADYQNFTEIEPALAYLQEKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLEEAEAAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|163941626|ref|YP_001646510.1| carbamoyl phosphate synthase large subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|226700922|sp|A9VTC6|CARB_BACWK RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|163863823|gb|ABY44882.1| carbamoyl-phosphate synthase, large subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 1072

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 674 LTKLGIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 714


>gi|113477178|ref|YP_723239.1| acetyl-CoA carboxylase biotin carboxylase subunit [Trichodesmium
           erythraeum IMS101]
 gi|110168226|gb|ABG52766.1| acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha /
           biotin carboxylase [Trichodesmium erythraeum IMS101]
          Length = 451

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  ++K  VP   G   +++  + A +  + +  P  ++K+    GGRG
Sbjct: 120 AKETMQKAGVPTVPGSDGLLTDENEAVAIAEKIGFP-LIIKATAGGGGRG 168


>gi|295401640|ref|ZP_06811607.1| carbamoyl-phosphate synthase, large subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976260|gb|EFG51871.1| carbamoyl-phosphate synthase, large subunit [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 1041

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 77/217 (35%), Gaps = 49/217 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +I++V  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMYELGEPVPESEIITNVDEAVAFAEKIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  I+ + + L  + IT+             +E      +E+   ++ D T+
Sbjct: 180 GI--AETMEQFIALVEKGLAESPITQC-----------LIERSVAGYKEIEYEVMRDNTN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRASAIKIISALGIIG 279

Query: 182 QARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I    D F   Y         L+E+NP +   + 
Sbjct: 280 GCNIQFALDPFSKRY--------YLIEVNPRVSRSSA 308


>gi|154243927|ref|YP_001409500.1| CoA-binding domain-containing protein [Xanthobacter autotrophicus
           Py2]
 gi|154163049|gb|ABS70264.1| CoA-binding domain protein [Xanthobacter autotrophicus Py2]
          Length = 727

 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+    +PVA   +  S   A +A +TL  P+ +   Q     +       L   +   V
Sbjct: 510 LIADAGLPVAPWRIAGSRAEAIAAAETLGMPIVLKAEQAGLIHKSDSGGVRLGLVTTAAV 569

Query: 71  RVESSLKSVISDIREILGSTLITKQTGP 98
                      D+   LG+T +  Q   
Sbjct: 570 G------EAYDDVANRLGTTTVLLQRQA 591


>gi|254416325|ref|ZP_05030078.1| cyanophycin synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196176763|gb|EDX71774.1| cyanophycin synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 869

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    VPV +G  +  +   +SAI+ + G   V+K     G  G+G   ++    + 
Sbjct: 200 KQILLDAGVPVPRGTTVLYLDELDSAIEYVGGYPIVIKP--LDGNHGRGITIDIRNWDE- 256

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                  ++      ++I  + ++ +       RV
Sbjct: 257 -------VEKAYDRAKDISRAVIVERYYPGFDHRV 284


>gi|298252558|ref|ZP_06976352.1| formate-dependent phosphoribosylglycinamide formyltransferase (GAR
           transformylase) [Gardnerella vaginalis 5-1]
 gi|297532922|gb|EFH71806.1| formate-dependent phosphoribosylglycinamide formyltransferase (GAR
           transformylase) [Gardnerella vaginalis 5-1]
          Length = 427

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 53/182 (29%), Gaps = 31/182 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P       SS    E   K +  P  VVK  + + G G+             VR   +
Sbjct: 133 GLPTTPYCFASSYEELEYGAKKVGYPC-VVKPVMSSSGHGQS-----------IVRSSEN 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGS--RVNCVYVEDGADILRELY-LSLLVDRTSGMVA 132
           L +  ++ +          +    G     + V VE  A +  EL  L++          
Sbjct: 181 LLAAWNEAQH--------GRRAAAGHENECSRVIVEALAPLDYELTVLTISSCAGITTCE 232

Query: 133 FIASTQGGMDIEEVA--KDYPQKIFKLLIDPL----IGVTSEDVASLCDMLELQGQARID 186
            IA  Q   D  E     + P+ I     D       G+T  D+A               
Sbjct: 233 PIAQRQQDGDYRESWQPANIPESIRTNAKDIAKRAVEGLT--DIAQEAGEAGWGVYGVEL 290

Query: 187 GG 188
             
Sbjct: 291 FV 292


>gi|297623352|ref|YP_003704786.1| acetyl-CoA carboxylase, biotin carboxylase [Truepera radiovictrix
           DSM 17093]
 gi|297164532|gb|ADI14243.1| acetyl-CoA carboxylase, biotin carboxylase [Truepera radiovictrix
           DSM 17093]
          Length = 445

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 8   AKALLRKYNVPV-AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ + ++ +VPV      ++S+  A++    +  P+ ++K+    GGRG    +      
Sbjct: 119 ARRVAQESDVPVVPGSGALASLDEAKAFAAKIGYPV-ILKASAGGGGRGMRIVRSEE--- 174

Query: 67  KGGVRVESSLKSVISDIREILGS 89
                +  +L +   + R   G+
Sbjct: 175 ----ELARNLANAQEEARAAFGN 193


>gi|288800049|ref|ZP_06405508.1| phosphoribosylglycinamide formyltransferase 3 [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288333297|gb|EFC71776.1| phosphoribosylglycinamide formyltransferase 3 [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 386

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 28/113 (24%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  A     +++   E+A + +  P  VVK  + + G G+   +      K
Sbjct: 111 AKEL----GIRTAHYYYATTLSELETAAEKIGFPC-VVKPLMSSSGHGQSVVRS-----K 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            G++V    K  I                G  G  V  + VE+  +   E  L
Sbjct: 161 EGLQVAF--KEAIE---------------GSRGD-VKEIIVEEFIEFDSEFTL 195


>gi|255065427|ref|ZP_05317282.1| phosphoribosylamine--glycine ligase [Neisseria sicca ATCC 29256]
 gi|255050252|gb|EET45716.1| phosphoribosylamine--glycine ligase [Neisseria sicca ATCC 29256]
          Length = 444

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 127 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 172

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 173 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 223

Query: 128 SGMVA 132
             +  
Sbjct: 224 HVLPM 228


>gi|229134696|ref|ZP_04263505.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-ST196]
 gi|228648742|gb|EEL04768.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus
           BDRD-ST196]
          Length = 1018

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 620 LTKLGIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|256821473|ref|YP_003145436.1| phosphoribosylamine/glycine ligase [Kangiella koreensis DSM 16069]
 gi|256795012|gb|ACV25668.1| phosphoribosylamine/glycine ligase [Kangiella koreensis DSM 16069]
          Length = 427

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 22/104 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A++ ++ +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAAYQNFTEIEPAKAYVREMGTPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GV +  +++     I ++L       + G  G RV    VE+  
Sbjct: 154 GVIIAETIEQADEAIDDMLA----GNKFGDAGHRV---VVEEFL 190


>gi|222529369|ref|YP_002573251.1| carbamoyl phosphate synthase large subunit [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456216|gb|ACM60478.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 1075

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 38/201 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+    G    ++  A     +L  P+ V  S +  G   K  F +        
Sbjct: 676 KILNKLNIKRPPGFTCYTLQEALRIANSLGYPVLVRPSYVLGGQGMKIAFDD-------- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
               + +  ++S  + +    ++       G  +    + DG DIL    +  +++    
Sbjct: 728 ----NDIVEMLSYAKNLNDHPILID-KYIVGKEIEVDAISDGEDIL----IPGIMEHIER 778

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                A    G  I         K  +  I        E    +   LE +G   +    
Sbjct: 779 -----AGVHSGDSISLYPARNISKYIEEKI-------VEYTLKIAKELECKGLINVQFIV 826

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
               LY         ++E+NP
Sbjct: 827 QNEELY---------VIEVNP 838


>gi|111225052|ref|YP_715846.1| hypothetical protein FRAAL5694 [Frankia alni ACN14a]
 gi|111152584|emb|CAJ64326.1| Hypothetical protein; putative NAD(P)-binding Rossmann-fold and
           GCN5-related N-acetyltransferase domains [Frankia alni
           ACN14a]
          Length = 881

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           + ALL  Y + V    +++S   A  A + L  P+ V         R   R + L     
Sbjct: 638 SAALLDCYGITVEPAELVTSPRRAVEAAQRLGYPVAVKARSRPYRHRPDLRGQRLDLPDA 697

Query: 68  GGVRVESS 75
             V    +
Sbjct: 698 AAVSAAWT 705


>gi|160881589|ref|YP_001560557.1| phosphoribosylamine--glycine ligase [Clostridium phytofermentans
           ISDg]
 gi|160430255|gb|ABX43818.1| phosphoribosylamine--glycine ligase [Clostridium phytofermentans
           ISDg]
          Length = 423

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 27/127 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +K L++KY++P A      +  +A+ AI+ L    Y  V+K+   A G+           
Sbjct: 106 SKDLMKKYHIPTAAY---ETFDSAKKAIRYLETSPYPIVLKADGLALGK----------- 151

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV + ++ +  ++ ++ I    ++ KQ G  G     + +E+   I RE+ +    D
Sbjct: 152 ---GVLICNTYEEALAGVKSI----MLDKQFGTAGDL---LVIEEFM-IGREVSVLAFCD 200

Query: 126 RTSGMVA 132
             +    
Sbjct: 201 GKTIKPM 207


>gi|52079137|ref|YP_077928.1| phosphoribosylamine--glycine ligase [Bacillus licheniformis ATCC
           14580]
 gi|52784505|ref|YP_090334.1| phosphoribosylamine--glycine ligase [Bacillus licheniformis ATCC
           14580]
 gi|319647087|ref|ZP_08001313.1| PurD protein [Bacillus sp. BT1B_CT2]
 gi|52002348|gb|AAU22290.1| phosphoribosylglycinamide synthetase [Bacillus licheniformis ATCC
           14580]
 gi|52347007|gb|AAU39641.1| PurD [Bacillus licheniformis ATCC 14580]
 gi|317390911|gb|EFV71712.1| PurD protein [Bacillus sp. BT1B_CT2]
          Length = 422

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMKKYQIPTAEYETFTSFENAKAYVEEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAMTAEEAVQCLHDFL-------EDEKFGEASASVVIEEFLS-GEEFSLMAFVKGE 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 KVYPMVIA 210


>gi|325663462|ref|ZP_08151872.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470361|gb|EGC73592.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 423

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A          A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYQIPTAAYENFDCAEEALAYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     ++ +    ++  Q G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTLEEAQEGVKSL----MLDHQFGAAG---NTIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKTMTSAQD 212


>gi|266624707|ref|ZP_06117642.1| carbamoyl-phosphate synthase, large subunit [Clostridium hathewayi
           DSM 13479]
 gi|288863423|gb|EFC95721.1| carbamoyl-phosphate synthase, large subunit [Clostridium hathewayi
           DSM 13479]
          Length = 1075

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + +A+  V  SV  A      L  P+                 +        
Sbjct: 133 KKAMNELGIEMARSEVAYSVDEALKIADQLGYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +   + +     L ++L           V  V VE+      EL L ++ D   
Sbjct: 178 GGGLVYNRDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEIVRDSEG 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 RMITV 231



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A++ K  +P+ +  +  +V  A +    +  P+ V  S +  GGRG
Sbjct: 672 RAMMEKLEIPMPESGMAVNVEEALAIAAKIGYPVMVRPSYVL-GGRG 717


>gi|257062862|ref|YP_003142534.1| acetyl/propionyl-CoA carboxylase, alpha subunit [Slackia
           heliotrinireducens DSM 20476]
 gi|256790515|gb|ACV21185.1| acetyl/propionyl-CoA carboxylase, alpha subunit [Slackia
           heliotrinireducens DSM 20476]
          Length = 435

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 27/181 (14%)

Query: 9   KALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K L+  + + V  G V + S+  A +A   +  P+                 K       
Sbjct: 120 KELMASHGLQVIPGAVELHSLEEARAAADRIGYPVM---------------LKARLGGGG 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G+R+  + K +  + ++       +   G        +Y+E      R + L +L D  
Sbjct: 165 RGIRLVQTPKDLEENWQQATTEAFNSFGDGG-------LYLEKYIHPARHVELQILADEQ 217

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQARID 186
             +V      +    ++   +   ++     + P                +   G   ++
Sbjct: 218 GNVVCL---GERDCSLQRRHQKLVEESPSPAVSPEQRERIMAQAVKAVKAIGYVGAGTLE 274

Query: 187 G 187
            
Sbjct: 275 F 275


>gi|167823391|ref|ZP_02454862.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 9]
 gi|226195352|ref|ZP_03790941.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           Pakistan 9]
 gi|225932554|gb|EEH28552.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           Pakistan 9]
          Length = 425

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYLDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 AH---ALASSQD 212


>gi|160915959|ref|ZP_02078167.1| hypothetical protein EUBDOL_01984 [Eubacterium dolichum DSM 3991]
 gi|158432435|gb|EDP10724.1| hypothetical protein EUBDOL_01984 [Eubacterium dolichum DSM 3991]
          Length = 400

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 11/89 (12%)

Query: 1   MNIHEYQAK----ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           M+  EYQ K       R+ NV  A+  + +++  A    + +  P+ V+K  I  G    
Sbjct: 116 MD--EYQCKSKMKEAFRRANVATARYRIATTLEDAIEFTQEVGFPI-VIKPDIGVG---- 168

Query: 57  GRFKELPADSKGGVRVESSLKSVISDIRE 85
                   + +   +   +    I  + E
Sbjct: 169 ANDTHKINNLQELKQCFMTPFETIMIMEE 197


>gi|46579136|ref|YP_009944.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603289|ref|YP_967689.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           vulgaris DP4]
 gi|81830493|sp|Q72E56|PURT_DESVH RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|171769282|sp|A1VFP6|PURT_DESVV RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|46448549|gb|AAS95203.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120563518|gb|ABM29262.1| formate-dependent phosphoribosylglycinamide formyltransferase
           [Desulfovibrio vulgaris DP4]
 gi|311232975|gb|ADP85829.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           vulgaris RCH1]
          Length = 393

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 29/139 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +     S+     +AI+T+  P  VVK  + + G+G+             VR  + 
Sbjct: 126 GLPTSPYRFASTEEEYRAAIETVGLPC-VVKPVMSSSGKGQSL-----------VRTPAD 173

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + S  +  +        T      G     V VE   D   E  ++LL  R +G V F  
Sbjct: 174 IDSAWAYAQ--------TGGRAGAG----RVIVEGFVDFDYE--ITLLTVRHAGGVTFCD 219

Query: 134 -IASTQGGMDIEEVAKDYP 151
            I   Q   D  E  +  P
Sbjct: 220 PIGHLQKDGDYRESWQPQP 238


>gi|94986169|ref|YP_605533.1| carbamoyl phosphate synthase large subunit [Deinococcus
           geothermalis DSM 11300]
 gi|167006439|sp|Q1IWM0|CARB_DEIGD RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|94556450|gb|ABF46364.1| carbamoyl-phosphate synthase, large subunit [Deinococcus
           geothermalis DSM 11300]
          Length = 1029

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P  +G V  +   A      L  PL V  S +  GGR     + +         + + 
Sbjct: 678 GLPQPRGKVAQTPEQARELAAELGFPLMVRPSYVL-GGRAMRTVRSME-------ELTTY 729

Query: 76  LKSVISDIR 84
           L  V + + 
Sbjct: 730 LDEVYAAVE 738



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 29/133 (21%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA   ++K  V  A+G ++ S+  A    K +  P+ +         R           
Sbjct: 132 FQAA--MKKIGVETARGKMVHSLEEAIEYQKEIGLPIVI---------RPSFTLGGTGGG 180

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  + +             L   + G   S V+ V +E+     +E  L ++ D
Sbjct: 181 ------IAHTYEDF-----------LKITEGGLRDSPVHSVLLEESILGWKEYELEVMRD 223

Query: 126 RTSGMVAFIASTQ 138
             +  V  I S +
Sbjct: 224 -HADTVVIITSIE 235


>gi|330834160|ref|YP_004408888.1| carbamoyl phosphate synthase large subunit [Metallosphaera cuprina
           Ar-4]
 gi|329566299|gb|AEB94404.1| carbamoyl phosphate synthase large subunit [Metallosphaera cuprina
           Ar-4]
          Length = 1046

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 64/220 (29%), Gaps = 41/220 (18%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +PV       S   A    + +  P+ V +   + GGRG                V    
Sbjct: 138 IPVPPSFSARSSDEAIKKAEEIGYPVMV-RVSFNLGGRGS--------------TVAWDR 182

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
           +S+   I   L  + I +           V VE   +  +EL   ++ D           
Sbjct: 183 ESLRKSIDRALSQSYIGE-----------VLVEKYLNHWKELEYEVMRDSKGNSAVIAC- 230

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQARIDGGD 189
                 IE +          ++I P   + +++          + + + L G+  +    
Sbjct: 231 ------IENLDPMGVHTGESIVITPCQTLDNKEFQEMRSLSMKVAESINLVGECNVQFAL 284

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
              +      + +  +   + L     G       +K+S 
Sbjct: 285 DPYSYTNYVIETNPRMSRSSALASKATGYPLAYVSAKLSL 324


>gi|251771014|gb|EES51598.1| phosphoribosylglycinamide synthetase [Leptospirillum
           ferrodiazotrophum]
          Length = 432

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 73/216 (33%), Gaps = 30/216 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  +P A    ++S   AE   K    P  V+K+   A G+             
Sbjct: 107 AKALMERAGIPTAPWKTVTSREEAEDCRKRWGLP-LVLKADGLAQGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V SS +     +   L    +     P G  V   ++E       E+   +  D  
Sbjct: 153 -GVAVVSSREEWDEALGRYLDRREV-----PGGEVV---FIEKALS-GPEVSFIVATDGK 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           + +      T             P      ++ P+ G ++ +    C+++E         
Sbjct: 203 TFVP---FPTARDFKRIGAGDKGPNTGGMGVLTPVPGWSARNQEKACEIIERALWGLAKA 259

Query: 188 GDLFPN-LYK--AFCDKDMSLLEINPLIIMKNGRLR 220
           G  F   LY      ++  S+LE N  +     ++ 
Sbjct: 260 GAPFSGFLYAGLMMTEEGPSVLEFNARMGDPEAQIL 295


>gi|261340914|ref|ZP_05968772.1| phosphoribosylamine--glycine ligase [Enterobacter cancerogenus ATCC
           35316]
 gi|288316969|gb|EFC55907.1| phosphoribosylamine--glycine ligase [Enterobacter cancerogenus ATCC
           35316]
          Length = 430

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|169349742|ref|ZP_02866680.1| hypothetical protein CLOSPI_00480 [Clostridium spiroforme DSM 1552]
 gi|169293817|gb|EDS75950.1| hypothetical protein CLOSPI_00480 [Clostridium spiroforme DSM 1552]
          Length = 401

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K +  K  V VA+  +++S    ++ I+ +  P+ V
Sbjct: 118 KQVFFKAGVNVARYCLVNSFEEVKAFIEKVGYPVVV 153


>gi|86132357|ref|ZP_01050952.1| carbamoyl-phosphate synthase, large subunit [Dokdonia donghaensis
           MED134]
 gi|85817276|gb|EAQ38459.1| carbamoyl-phosphate synthase, large subunit [Dokdonia donghaensis
           MED134]
          Length = 950

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  ++P  +     +   A +  + L  P+ V  S +  G                G+
Sbjct: 690 LLKNLDIPYPEFDTAETADEALAVAQKLDYPILVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  +   +   + ++L   
Sbjct: 735 KIVINDDELEEHVVDLLRKI 754


>gi|83747881|ref|ZP_00944913.1| Biotin carboxylase [Ralstonia solanacearum UW551]
 gi|207739270|ref|YP_002257663.1| biotin carboxylase protein [Ralstonia solanacearum IPO1609]
 gi|83725414|gb|EAP72560.1| Biotin carboxylase [Ralstonia solanacearum UW551]
 gi|206592643|emb|CAQ59549.1| biotin carboxylase protein [Ralstonia solanacearum IPO1609]
          Length = 455

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 112/334 (33%), Gaps = 47/334 (14%)

Query: 8   AKALLRKYNVPVAKG---VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R+  VP   G    +     A  +    +  P+ +VK+    GGRG    +E  A
Sbjct: 119 AKRAMREAGVPCVPGPDTSLPDDPAAVLAIAHEIGFPV-IVKAAGGGGGRGMRVVQEAAA 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            +               + R   G+                VY+E      R + + +L 
Sbjct: 178 LADALTLT-------REEARRAFGNP--------------EVYIEKFLTHPRHVEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           DR    + ++ S      ++   +   ++     IDP LI    E  A+ C  +   G  
Sbjct: 217 DRYGHAI-WLGSR--DCSLQRRHQKVLEEAPAPGIDPSLIAEVGERCAAACRQVGYCGAG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQ-- 240
             +        Y  F + +  L   +P+  M +G  +     +++  +    R  DI   
Sbjct: 274 TFEFLYENGAFY--FIEMNTRLQVEHPVTEMTSGIDIVQQQIRVARGEPLTLRQEDIACR 331

Query: 241 --ELR-DVSEEDSREIEAKQHNLSYIALDGNIGCMVN---GAGLAMATMDIIKLYGGAPA 294
              L   ++ E           ++ + L G  G  V+   GAG  + +     +      
Sbjct: 332 GHALECRINAEHPDTFRPSPGVITGLRLPGGYGVRVDTHAGAGYRVPSHYDSMIAKL--- 388

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
               +  GA ++      ++   +  V GI  N+
Sbjct: 389 ----IVHGASREDALQRMQLALDELQVDGIATNV 418


>gi|146296939|ref|YP_001180710.1| carbamoyl phosphate synthase large subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410515|gb|ABP67519.1| carbamoyl-phosphate synthase large subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 1075

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 17/107 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+    G    ++  A     +L  P+ V  S +  G                G
Sbjct: 676 KILNKLNIKRPPGFTCYTLQEALRIANSLGYPVLVRPSYVLGG---------------QG 720

Query: 70  VRVESSLKSVISDI--REILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++      ++  +   + L S  I       G  +    + DG DI
Sbjct: 721 MKIAFDDDDIVEMLSYAKNLNSHPILIDKYIVGKEIEVDAISDGEDI 767


>gi|319400937|gb|EFV89156.1| biotin carboxylase [Staphylococcus epidermidis FRI909]
          Length = 452

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 24/124 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +++  VPV  G    + SV   +   K +  P+ V+K  + +GG GKG        
Sbjct: 118 ARQTVKQAGVPVIPGSNDAVQSVDEIKLLAKEIGFPV-VLK--VASGGGGKGIRI----- 169

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               V+  S L   + + +                     VYVE    + + + + ++ D
Sbjct: 170 ----VKEASQLDQALKEAKSEGQKYFNDD----------RVYVEAFIPVAKHVEVQIIGD 215

Query: 126 RTSG 129
             + 
Sbjct: 216 GKNN 219


>gi|297626336|ref|YP_003688099.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296922101|emb|CBL56669.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 1113

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 33/157 (21%)

Query: 19  VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKS 78
           VA+  +  SV    +A K L  P+ +  S    G                G    +    
Sbjct: 149 VARSHICHSVDDVMAAAKDLGFPVVLRPSYTMGGV---------------GSGFANDPDE 193

Query: 79  VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQ 138
           ++              Q G   S V  V VE+     +E  L L+ D+ S  V  + S  
Sbjct: 194 LLQMA-----------QIGLDASPVTEVLVEESILGWKEFELELMRDK-SDNVVIVCS-- 239

Query: 139 GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
               IE            + + P + +T  +   + D
Sbjct: 240 ----IENFDPMGVHTGDSITVAPAMTLTDREYQRMRD 272



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K  + +S   A +    +  P+ V  S +  GGRG
Sbjct: 684 KVLDDAGLPAPKYGMATSFTEAHAVAAEIGYPVLVRPSYVL-GGRG 728


>gi|46849487|dbj|BAD17953.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Eptatretus burgeri]
          Length = 1005

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 18/93 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A+         A + I++   P  VVK+   A G+             
Sbjct: 96  SKAFMDRHGIPTARWKAFECPDEACAYIRSADFPALVVKASGLAAGK------------- 142

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
            GV V S+ +     + +I    +  K+ G  G
Sbjct: 143 -GVSVASTQEEACEAVMQI----MKGKRCGAAG 170


>gi|15920812|ref|NP_376481.1| biotin carboxylase [Sulfolobus tokodaii str. 7]
 gi|15621596|dbj|BAB65590.1| 513aa long hypothetical biotin carboxylase [Sulfolobus tokodaii
           str. 7]
          Length = 513

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
             K + ++  VP++ G    + S+  A    + +  P+ V K+    GG G
Sbjct: 120 DGKRIAKQAGVPISPGSDGPVDSLDEALKLAEKIGYPIMV-KAAFGGGGTG 169


>gi|319935687|ref|ZP_08010118.1| phosphoribosylformylglycinamidine synthase [Coprobacillus sp. 29_1]
 gi|319809345|gb|EFW05780.1| phosphoribosylformylglycinamidine synthase [Coprobacillus sp. 29_1]
          Length = 418

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 43/180 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++++P A    +++   A +A+ +   P+ VVK+   A G+             
Sbjct: 106 SKDFMARHHIPTAAYKEVNTYDEAVAALTSFTYPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +    K+ I  ++E+    +I       G   + V +E+          SLL    
Sbjct: 152 -GVVICDDEKTAIETLKEM----MIDGSLDGAG---SKVVLEEFL---TGFECSLLCFTD 200

Query: 128 SGMVAFIASTQ--------------GGMDIEEVAKDYP----QKIFKLLIDPLIGVTSED 169
              +  + S +              GGM         P    + I K ++DP +   +ED
Sbjct: 201 GKTIVPMVSAKDHKQIYDGNKGPNTGGMGTVSPNPFMPEGMDETIQKDILDPFMAGLAED 260


>gi|304310827|ref|YP_003810425.1| hypothetical protein HDN1F_11890 [gamma proteobacterium HdN1]
 gi|301796560|emb|CBL44772.1| Hypothetical protein HDN1F_11890 [gamma proteobacterium HdN1]
          Length = 606

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 12/100 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR   +P    VV S   AA  A + +  P+ V         RG+G   ++       
Sbjct: 230 QVLRDAGLPAPHHVVASDTDAAVRAGEHIGWPVVVKPID---ADRGEGVSVDIND----- 281

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               S+L+S     ++   S L+  +    G   + +++ 
Sbjct: 282 ---VSALRSAFELAQKASRSRLVLVERQVAG-VCHRLFIA 317


>gi|294630199|ref|ZP_06708759.1| phosphoribosylamine-glycine ligase [Streptomyces sp. e14]
 gi|292833532|gb|EFF91881.1| phosphoribosylamine-glycine ligase [Streptomyces sp. e14]
          Length = 417

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V ++      A+     P YVVK    A G+G
Sbjct: 106 AKDVMAGAGVPTARSYVCTTEAEVTEALNAFGAP-YVVKDDGLAAGKG 152


>gi|204931273|ref|ZP_03222033.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204319888|gb|EDZ05095.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|117956423|gb|ABK58727.1| carbamoyl-phosphate synthase [Coniothyrium minitans]
          Length = 1170

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  +     ++P+AK + ++SV  A  A + +  P+ V  +    G
Sbjct: 214 RDLFARALDEIDIPIAKSIAVNSVEEALDAAEKVGYPIIVRAAYALGG 261


>gi|113953489|ref|YP_730413.1| carbamoyl phosphate synthase large subunit [Synechococcus sp.
           CC9311]
 gi|113880840|gb|ABI45798.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp.
           CC9311]
          Length = 1107

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  V V    + S++  AES   ++     +++     GG G G           
Sbjct: 133 KQAMERIGVHVCPSGIASTLEEAESVGASISSYPRIIRPAFTLGGSGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +           TG   S V+ + +E      +E  L ++ D  +
Sbjct: 182 ---IAYNPEEFSAICK-----------TGLDASPVSQILIEKSLLGWKEFELEVMRD-LA 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T  +   L D 
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDREYQRLRDQ 268


>gi|227892751|ref|ZP_04010556.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           ultunensis DSM 16047]
 gi|227865392|gb|EEJ72813.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           ultunensis DSM 16047]
          Length = 461

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 5   EYQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           E+ A+ L+  +NVPV  G    I S   A+   + +  P+ 
Sbjct: 117 EH-ARQLMIAHNVPVTPGSTGFIKSADEAKEIAQKIGYPIL 156


>gi|306829247|ref|ZP_07462437.1| carbamoylphosphate synthase large subunit [Streptococcus mitis ATCC
           6249]
 gi|304428333|gb|EFM31423.1| carbamoylphosphate synthase large subunit [Streptococcus mitis ATCC
           6249]
          Length = 388

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A++T+  P+
Sbjct: 117 KKLFQKAGVPVVPGAVIQTEADVDQAVETIGLPM 150


>gi|282899890|ref|ZP_06307851.1| Phosphoribosylglycinamide synthetase [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195160|gb|EFA70096.1| Phosphoribosylglycinamide synthetase [Cylindrospermopsis
           raciborskii CS-505]
          Length = 435

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 21/114 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+L+++  VP AK  V    H A+  ++    P+ V+K+   A G+             
Sbjct: 115 AKSLMQEAGVPTAKAAVFDQAHLAKIYVQQQGVPI-VIKADGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREIL------GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV V  ++      I  I           +  +    G  V+ + + DG  I 
Sbjct: 161 -GVTVAETITQAEMAIDAIFQGQFGSAGNFVVIEEYLLGQEVSVLAITDGVTIR 213


>gi|226313358|ref|YP_002773252.1| carbamoyl-phosphate synthase large chain [Brevibacillus brevis NBRC
           100599]
 gi|226096306|dbj|BAH44748.1| carbamoyl-phosphate synthase large chain [Brevibacillus brevis NBRC
           100599]
          Length = 1070

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           ++L+ +   PV + V++S++  A      +  P+ V  +    G  G     E       
Sbjct: 133 RSLMNELGEPVPESVIVSTIEEAVDFANEIGYPIIVRPAYTLGGTGGGICDDEETLREIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
              ++ S  +     + I G   I  +     +  NC+ V +  +I 
Sbjct: 193 ASGLKYSPITQCLIEKSIAGMKEIEYEVMRDAND-NCIVVCNMENID 238


>gi|254462357|ref|ZP_05075773.1| CoA-binding [Rhodobacterales bacterium HTCC2083]
 gi|206678946|gb|EDZ43433.1| CoA-binding [Rhodobacteraceae bacterium HTCC2083]
          Length = 696

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 74/223 (33%), Gaps = 25/223 (11%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            KA L    V V  G    +   A+ A   +  P+ +                       
Sbjct: 486 GKAWLSARGVRVPNGR-TVAAVDADDAATKIGYPVAL----------KMMSLDLAHKTEA 534

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLLVDR 126
           G V +  + K  +      +  ++            +   +E  +   L EL ++L  D 
Sbjct: 535 GAVALGINDKEALGIALTRMTRSVAQHDVNA---LSDSFLIEAMSPLPLAELIVTLRSDP 591

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             G    + S  GG+  E V       +     D    + S  VA L +    +G+   D
Sbjct: 592 QFGPALVLGS--GGILTELVGDAVTLLLPATPADIAEALGSLRVARLLN--GFRGRVVAD 647

Query: 187 GGDL---FPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDS 224
             ++      L  A+ ++   +  +EINP+ +  +  +  +D+
Sbjct: 648 LEEIATALHQLCDAYLEERAKVAEIEINPMFVYAD-HIVAVDA 689


>gi|261821764|ref|YP_003259870.1| urea carboxylase [Pectobacterium wasabiae WPP163]
 gi|261605777|gb|ACX88263.1| urea carboxylase [Pectobacterium wasabiae WPP163]
          Length = 1204

 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 34/206 (16%)

Query: 6   YQAKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L     VP+  G  +++S+  A  A + +  P+ ++KS    GG G         
Sbjct: 117 HRARELAAAAGVPMTPGTPLLASLEEARVAAEEIGYPV-MLKSTAGGGGIGL-----TRC 170

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                +           +    LG    +          + V++E   D  R + + +  
Sbjct: 171 ADTAALHAAW-------ESVRRLGEQFFSD---------SGVFLERCIDRARHVEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D        +A  +    ++   +   ++     +           A L   ++L     
Sbjct: 215 DGKGR---VVALGERDCSLQRRNQKVVEETPAPHLPDAT-----RAALLASAVKLGELVN 266

Query: 185 IDGGDLFPNLYKAFCDKD-MSLLEIN 209
                    +Y A  ++D    LE+N
Sbjct: 267 YRSAGTVEFIYDA--ERDAFFFLEVN 290


>gi|193213165|ref|YP_001999118.1| carbamoyl-phosphate synthetase large chain domain-containing
           protein [Chlorobaculum parvum NCIB 8327]
 gi|193086642|gb|ACF11918.1| Carbamoyl-phosphate synthetase large chain domain protein
           [Chlorobaculum parvum NCIB 8327]
          Length = 618

 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 38/202 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL K  +P  +    +S   A+   K +  P+ V  S +  G                 
Sbjct: 214 ALLEKLEIPHPEYGTATSFAEAQEITKRIGYPVLVRPSYVLGG---------------RA 258

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +R+  +  S+   + + L       +  P       + ++   +   E  +  L D T  
Sbjct: 259 MRIIYNDDSLKEYVDQALF----ISEKYP-------LLIDHFLETAVEFDIDALADETDC 307

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGG 188
           +++ I        I          +    +DP  I    E    L   + + G   +   
Sbjct: 308 VISGIMQHVEAAGIHSGDSTS--ILPYYNMDPAAIATMKEYTRKLAKSIGVIGLMNVQYA 365

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               ++Y         ++E+NP
Sbjct: 366 VQNGSVY---------VIEVNP 378


>gi|254975794|ref|ZP_05272266.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-66c26]
 gi|255093181|ref|ZP_05322659.1| putative acetyl-CoA synthetase [Clostridium difficile CIP 107932]
 gi|255314923|ref|ZP_05356506.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-76w55]
 gi|255517597|ref|ZP_05385273.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-97b34]
 gi|255650708|ref|ZP_05397610.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-37x79]
 gi|260683795|ref|YP_003215080.1| putative acetyl-CoA synthetase [Clostridium difficile CD196]
 gi|260687455|ref|YP_003218589.1| putative acetyl-CoA synthetase [Clostridium difficile R20291]
 gi|306520628|ref|ZP_07406975.1| putative acetyl-CoA synthetase [Clostridium difficile QCD-32g58]
 gi|260209958|emb|CBA63950.1| putative acetyl-CoA synthetase [Clostridium difficile CD196]
 gi|260213472|emb|CBE05163.1| putative acetyl-CoA synthetase [Clostridium difficile R20291]
          Length = 699

 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++KY VPV       S+   +  +K +  P+ V+K                 +D  G   
Sbjct: 492 MKKYGVPVPGQGNTKSIDELDEILKYIKYPV-VLKI--------NSSEILHKSDVGGVKI 542

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +    +    EIL       +     + ++ + V++  +   E+ + +  D   G +
Sbjct: 543 GIKNRDEAVDAYNEIL----TNVKKAKPDANIDGILVQEMVESGIEIIIGITNDDQFGPM 598

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----ELQGQARIDG 187
             +    GG+ +E         ++ L I+    +          +L      +       
Sbjct: 599 LLVG--LGGVFVEVFKDTT---LYPLPINHDEAIMMLKKLKSFKLLNGYRGSEPCDIDAL 653

Query: 188 GDLFPNLYK-AFCDKD-MSLLEINPLIIMKNGR-LRVLDS 224
            D+   L K A+ +KD +  +++NP+ +   G+ +  +D+
Sbjct: 654 ADMMVKLGKYAYENKDEVKEIDLNPVFVYPKGKGVCAVDA 693


>gi|297530997|ref|YP_003672272.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           C56-T3]
 gi|297254249|gb|ADI27695.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           C56-T3]
          Length = 1042

 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 65/187 (34%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  +++SV  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMHELGEPVPESEIVTSVEEAVAFAEQIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  ++ + +           G   S +    +E      +E+   ++ D+++
Sbjct: 180 GI--AENMEQFLALVEK-----------GLAESPIRQCLIERSVAGFKEIEYEVMRDQSN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGIHTGDSIVVAPSQTLTDEEYQMLRSSAVKIISALGIIG 279

Query: 182 QARIDGG 188
              I   
Sbjct: 280 GCNIQFA 286


>gi|271964313|ref|YP_003338509.1| carbamoyl-phosphate synthase large subunit [Streptosporangium
           roseum DSM 43021]
 gi|270507488|gb|ACZ85766.1| carbamoyl-phosphate synthase, large subunit [Streptosporangium
           roseum DSM 43021]
          Length = 1097

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L +  +P  K     +V  A +    +  P+ V  S +  G
Sbjct: 683 RVLAEAGLPAPKHGTAVTVDEALAIAGEIGYPVLVRPSYVLGG 725


>gi|281421185|ref|ZP_06252184.1| carbamoyl-phosphate synthase, large subunit [Prevotella copri DSM
           18205]
 gi|281404720|gb|EFB35400.1| carbamoyl-phosphate synthase, large subunit [Prevotella copri DSM
           18205]
          Length = 1077

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 36/169 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  K ++ V       ++  A +A + +  P+ +  +    G                
Sbjct: 133 KEL-NKVDLKVPVSHACENMEEAVAAARNIGYPIMIRSAYALGGL--------------- 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  + +                       +    V VE+     +E+    + D   
Sbjct: 177 GSGVCKTEEEFKEIAESAF-------------TFAPQVLVEESLKGWKEIEFECIRDAND 223

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
                +AS +   + + +     + I   ++ P   +T E V  L D+ 
Sbjct: 224 RCFT-VASME---NFDPLGIHTGESI---VVAPTCSLTDEQVKMLQDIA 265


>gi|171463628|ref|YP_001797741.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193166|gb|ACB44127.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 678

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G    I +   A    + +  P+ +  S                  
Sbjct: 123 SKKLALEAKVNTIPGYNEAIDTNEEAVKIAQGIGYPVMIKAS---------------AGG 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K               T+     G   + +++E   +  R + + +L D
Sbjct: 168 GGKGLRVAFNDKEAAEGFAAC-----KTEAMNSFGD--DRIFIEKFVEDPRHIEIQVLGD 220

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                   +   +    I+   +   ++     IDP       E   +L   +  Q    
Sbjct: 221 SHGN---VVYLNERDCSIQRRHQKVIEEAPSPFIDPATRKAMGEQAVALAKAVNYQSAGT 277

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             DK    LE+N
Sbjct: 278 VEFV--------VGKDKSFYFLEMN 294


>gi|157737425|ref|YP_001490108.1| phosphoribosylamine--glycine ligase [Arcobacter butzleri RM4018]
 gi|157699279|gb|ABV67439.1| phosphoribosylamine-glycine ligase [Arcobacter butzleri RM4018]
          Length = 420

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+KYN+P A  +  S+   A   I+T+  P+ VVK+     G+              
Sbjct: 104 KNILKKYNIPTAAFIETSNEKEAHDFIETMNLPI-VVKADGLCAGK-------------- 148

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  S       + ++L         G  G     V VE+  D
Sbjct: 149 GVIIAQSKDEAKIAVSDML----SGASFGDAG---TSVVVEEYLD 186


>gi|126657223|ref|ZP_01728389.1| acetyl-CoA carboxylase [Cyanothece sp. CCY0110]
 gi|126621494|gb|EAZ92205.1| acetyl-CoA carboxylase [Cyanothece sp. CCY0110]
          Length = 450

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           AK  ++K  VP   G   ++ +   A +  + +  P+ ++K+    GGRG    +E
Sbjct: 120 AKKTMQKAGVPTVPGSAGLLDTEEEALNVARDIGYPV-MIKATAGGGGRGMRLVRE 174


>gi|73662878|ref|YP_301659.1| carbamoyl phosphate synthase large subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|82592666|sp|Q49WY4|CARB_STAS1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|72495393|dbj|BAE18714.1| carbamoyl-phosphate synthase large subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 1057

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LL   +VP   G   +S   A    +++  P+ V  S +  G
Sbjct: 669 EFEA--LLHTIDVPQPNGKTATSPQEALENARSIGYPVVVRPSYVLGG 714


>gi|109896597|ref|YP_659852.1| phosphoribosylamine--glycine ligase [Pseudoalteromonas atlantica
           T6c]
 gi|109698878|gb|ABG38798.1| phosphoribosylamine--glycine ligase [Pseudoalteromonas atlantica
           T6c]
          Length = 427

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 23/123 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEIEPALAYLQQTGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLDEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMV 131
            + 
Sbjct: 206 VLP 208


>gi|302864583|ref|YP_003833220.1| carbamoyl-phosphate synthase subunit L [Micromonospora aurantiaca
           ATCC 27029]
 gi|302567442|gb|ADL43644.1| Carbamoyl-phosphate synthase L chain ATP-binding [Micromonospora
           aurantiaca ATCC 27029]
          Length = 448

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 10/83 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+    VPVA G     S + AA +A   +  P+ V          G G      A 
Sbjct: 122 ARNLMAAAGVPVAPGTTEPASDLDAAVTAAAEIGYPVMVK------AAAGGGGMGMGVAA 175

Query: 66  SKGGVRVESSLKSVISDIREILG 88
            +  +R E     V +    + G
Sbjct: 176 DEAALRTEY--DKVRAFAERMFG 196


>gi|270293010|ref|ZP_06199221.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|270278989|gb|EFA24835.1| conserved hypothetical protein [Streptococcus sp. M143]
          Length = 388

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A++T+  P+
Sbjct: 117 KKLFQKAGVPVVPGAVIQTEADVDKAVETIGLPM 150


>gi|291286012|ref|YP_003502828.1| acetyl-CoA carboxylase, biotin carboxylase [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883172|gb|ADD66872.1| acetyl-CoA carboxylase, biotin carboxylase [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 445

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AK  ++K+ VPV  G    +     A +  + +  P+ +  S
Sbjct: 119 AKEAMKKFGVPVVPGSEGAVKDAKEARAIAEAMGYPVMIKAS 160


>gi|145481081|ref|XP_001426563.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393638|emb|CAK59165.1| unnamed protein product [Paramecium tetraurelia]
          Length = 310

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 16/83 (19%)

Query: 7   QAKAL----LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           Q+K L      K+ VP+ K +   +V+A +  +++            +   + KG  K L
Sbjct: 103 QSKLLQGLRFAKHGVPIPKSMAAFTVNAIKQTVRS------------NFTQQEKGVVKAL 150

Query: 63  PADSKGGVRVESSLKSVISDIRE 85
                 GV++      +IS   +
Sbjct: 151 DGYGGDGVQLARGQDEIISMASK 173


>gi|15805157|ref|NP_293843.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Deinococcus
           radiodurans R1]
 gi|6457782|gb|AAF09707.1|AE001874_4 acetyl-CoA carboxylase, biotin carboxylase subunit [Deinococcus
           radiodurans R1]
          Length = 445

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 9/105 (8%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            + +  + NVP V    V+ SV AA  A K +  P+  +K+    GGRG+   +      
Sbjct: 119 GREIAAQSNVPTVPGTGVLESVDAALLAAKQIGYPVL-LKASAGGGGRGQKVIRTQEELQ 177

Query: 67  KG-------GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
           KG                 ++    E      +       G  ++
Sbjct: 178 KGFNQAQEEARLYFGDPAIIMEKFLEEFRHIEVQVMGDGQGHVIH 222


>gi|152978227|ref|YP_001343856.1| carbamoyl phosphate synthase large subunit [Actinobacillus
           succinogenes 130Z]
 gi|150839950|gb|ABR73921.1| carbamoyl-phosphate synthase, large subunit [Actinobacillus
           succinogenes 130Z]
          Length = 1069

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 40/159 (25%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +   A              K+Q   G     R       S G
Sbjct: 133 KEAMAKIGLNTPKSFVCHTFDEA-------------WKAQEKVGFPTLIRPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +     +               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNRDEFQAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIIV-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|304406320|ref|ZP_07387977.1| phosphoribosylamine/glycine ligase [Paenibacillus curdlanolyticus
           YK9]
 gi|304344904|gb|EFM10741.1| phosphoribosylamine/glycine ligase [Paenibacillus curdlanolyticus
           YK9]
          Length = 421

 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL+KYN+P AK     +      A         V+K+   A G+              
Sbjct: 107 KNLLKKYNIPTAKYE-TFTDFETALAYLRQQEAPIVIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV V ++L+     +R +    ++ K  G +G   N V +E+   
Sbjct: 152 GVTVAATLEEAEQALRSM----MVDKVFGESG---NQVVIEEFLS 189


>gi|297823643|ref|XP_002879704.1| hypothetical protein ARALYDRAFT_321477 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325543|gb|EFH55963.1| hypothetical protein ARALYDRAFT_321477 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 645

 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 31/155 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             ++ +P+ + V I  +  A  A +    PL +   ++   GRG                
Sbjct: 197 FSQHGIPLPEFVEIGDIEGARKAGELFGYPLMIKSKRLAYDGRGNA-------------- 242

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V ++   + S +  +             G     +YVE  A  ++EL + +   R   MV
Sbjct: 243 VANNQDELSSAVTAL-------------GGFSRGLYVEKWARFVKELAVIVARGRDGSMV 289

Query: 132 AF----IASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
            +             I +   D P KI KL  D  
Sbjct: 290 CYPVVETIHRDNICHIVKAPADVPWKINKLATDVA 324


>gi|167856537|ref|ZP_02479246.1| phosphoribosylamine--glycine ligase [Haemophilus parasuis 29755]
 gi|167852340|gb|EDS23645.1| phosphoribosylamine--glycine ligase [Haemophilus parasuis 29755]
          Length = 431

 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++N+P A+    + +  A + +     P+ V+K+   A G+             
Sbjct: 108 AKDFLARHNIPTAEYQTFTEIEPALAYLHQKNAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      ++++L         G  G   + V +E+      E    ++VD  
Sbjct: 154 -GVIVAMTLAEAEEAVKDML----SGNAFGDAG---SRVVIEEFL-AGEEASFIVMVDGK 204

Query: 128 SGMVA 132
           +    
Sbjct: 205 NVEPM 209


>gi|220918761|ref|YP_002494065.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956615|gb|ACL66999.1| carbamoyl-phosphate synthase, large subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 1067

 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 38/187 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  +  A+  + +++  A +A + L  PL V  +    G                
Sbjct: 133 KETMTRLGIETARSEIATTLDQAMAAGQRLGFPLVVRPAYTMGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +++ +       L ++            V+ V VE+      EL L ++ D   
Sbjct: 178 GGGFAYNVEELEEIAARGLLAS-----------PVSQVLVEESVLGWEELELEVVRDAKG 226

Query: 129 GMV--AFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTS---EDVASLCDMLELQGQ 182
             +   FI       +++ +             +     + +   +    + D +E+ G 
Sbjct: 227 RKITVCFI------ENVDAMGVHTGDSYCTAPMLTISPELQARLQDQAYRIVDAIEVIGG 280

Query: 183 ARIDGGD 189
             +    
Sbjct: 281 TNVQFAH 287


>gi|52426177|ref|YP_089314.1| hypothetical protein MS2122 [Mannheimia succiniciproducens MBEL55E]
 gi|52308229|gb|AAU38729.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 392

 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VAKG V      A    K L  P+ V
Sbjct: 119 QMKEVFRKSGLKVAKGRVFKDDEDARKLAKQLKFPVIV 156


>gi|326316864|ref|YP_004234536.1| phosphoribosylamine--glycine ligase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373700|gb|ADX45969.1| Phosphoribosylamine--glycine ligase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 426

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 15/96 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA +R++ +P A     +    A + I  L  P+ VVK+   A G+             
Sbjct: 106 SKAFMRRHGIPTADYDTFTDPALAHAFIDRLGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  + +     +  +L            G+RV
Sbjct: 152 -GVVVAMTAQEAHDAVDFMLVDNKYGVSHNEGGARV 186


>gi|269796716|ref|YP_003316171.1| glutathione synthase/ribosomal protein S6 modification protein
           [Sanguibacter keddieii DSM 10542]
 gi|269098901|gb|ACZ23337.1| glutathione synthase/ribosomal protein S6 modification enzyme
           (glutaminyl transferase) [Sanguibacter keddieii DSM
           10542]
          Length = 331

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 72/242 (29%), Gaps = 33/242 (13%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR   + V +  V+       +A +  P P     +Q   GG+G G  +    D    V 
Sbjct: 112 LRAAGIDVPRTRVVVGTEHLLAAAQDFPTPFVTKHNQ---GGKGLGVQRFDHVDELAAVL 168

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
                +  +       G TL+ +   P    +  V +  G     E   S+  D   G  
Sbjct: 169 AAGDFEEPVD------GVTLLQEYVQPRDGSITRVEIVGG-----EHLYSVRADTLRGGF 217

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
               +    +D        P       + P  GV+   +       EL            
Sbjct: 218 QLCPADACAVDPTTGRPVLPPGA---TLAPEPGVSLFSLRE-----ELDPGIVEK----- 264

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSR 251
              Y AF       +    LI   +GR+   D   + + N     ++    R    E +R
Sbjct: 265 ---YLAFTRAHGIEIAGIELIESADGRVLTYDVNTNTNYNP---QVEAAAPRSGPREVAR 318

Query: 252 EI 253
            +
Sbjct: 319 YL 320


>gi|170692634|ref|ZP_02883796.1| CoA-binding domain protein [Burkholderia graminis C4D1M]
 gi|170142290|gb|EDT10456.1| CoA-binding domain protein [Burkholderia graminis C4D1M]
          Length = 731

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 118/356 (33%), Gaps = 37/356 (10%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           Y + V K  + ++   A      +  P+ +         + +     +   +   V    
Sbjct: 57  YGISVPKEALATTADEAAQFAADIGFPVVLKIVSPEILHKTEAGGVLVGVKNAADVVQGF 116

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           +   ++ + +          Q    G     V V+      +E+ +  + D + G    +
Sbjct: 117 TT--IMENAKR------YNAQANLLG-----VQVQQMIGGGQEVIVGAVTDPSFGK--LV 161

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
           A   GG+ +E +     +       D    +     A +   +   +   R     L  N
Sbjct: 162 AFGLGGVLVEVLKDITFRLAPATRDDARSMLDGIAAADMLKGVRGGEPVDREALAGLIEN 221

Query: 194 LYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSRE 252
           + +   D  ++S L++NP+   K G +   D +I  D         ++  R  S+ED   
Sbjct: 222 VSRLVSDFPEISELDLNPVFASKRGAI-AADVRIVLDFA-----PPVERYR-PSQEDIVR 274

Query: 253 IEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAF 312
              +      +A+   IG       +  + M  +   G    +   +   AD+     A+
Sbjct: 275 QMNRIMKPDSVAV---IGASAEDGKIGNSVMKNLINGGYK-GDIYPIHPKADEIMGHKAY 330

Query: 313 KIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV-KINIPLVMRLEGANVDIG 367
           K +        I + +F  I       K +  A+ EV K +IP  + +     + G
Sbjct: 331 KSVLDVPG--NIDVAVFA-IP-----AKFVAGALTEVGKKHIPGAVLIPSGFAETG 378


>gi|163800668|ref|ZP_02194569.1| putative acetyltransferase [Vibrio sp. AND4]
 gi|159176111|gb|EDP60905.1| putative acetyltransferase [Vibrio sp. AND4]
          Length = 877

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 15/140 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q+  L  ++   +    + S V  A    + +  P+ V         + +       +D
Sbjct: 480 HQSSPLFEQFGFHILPTWIASDVTEAVHMAENIGYPVAV---------KLRSPDIPHKSD 530

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G      + + V S    IL +  L        G  V  +          EL +S+ V
Sbjct: 531 VHGVALNLRNSQEVSSAAHAILDTAKLSYPAANLQGLLVQGM---AKLGSAEELRVSIAV 587

Query: 125 DRTSGMVAFIASTQGGMDIE 144
           D+  G V  +   QGG D  
Sbjct: 588 DKVFGPVILLG--QGGSDWN 605


>gi|308390231|gb|ADO32551.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           alpha710]
 gi|325135373|gb|EGC57994.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis M0579]
 gi|325203124|gb|ADY98578.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           M01-240149]
 gi|325207045|gb|ADZ02498.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           M04-240196]
 gi|325208993|gb|ADZ04445.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           NZ-05/33]
          Length = 423

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|292493441|ref|YP_003528880.1| phosphoribosylamine/glycine ligase [Nitrosococcus halophilus Nc4]
 gi|291582036|gb|ADE16493.1| phosphoribosylamine/glycine ligase [Nitrosococcus halophilus Nc4]
          Length = 442

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L +  +P A+    S V +A + IK    P+ VVK+   A G+             
Sbjct: 113 AKDFLMRCGIPTARYRTFSEVESAVAYIKMQGAPI-VVKADGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I  +  +L         G  G     V VE+         +S +V   
Sbjct: 159 -GVVVAQTEQEAIDAVHGMLAG-------GAFGEAGRRVVVEEFLRGEE---VSFIVLTD 207

Query: 128 SGMVAFIASTQG 139
              +  +AS+Q 
Sbjct: 208 GEHILPLASSQD 219


>gi|281423511|ref|ZP_06254424.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella oris
           F0302]
 gi|281402331|gb|EFB33162.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella oris
           F0302]
          Length = 387

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 42/141 (29%), Gaps = 28/141 (19%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           R+  +  AK     +    + A   +  P  VVK  + + G G+                
Sbjct: 113 RELGLRTAKYFYAKTFEEFKRAADEIGFPC-VVKPLMSSSGHGQSY-------------- 157

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGS-RVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             +   + +             +    G   V  V +E+  D   E  L  +  + +  +
Sbjct: 158 VHNDDELQAA----------FHEAMEEGRGDVKEVIIEEFIDFDSEFTLLTVTQKNAPTI 207

Query: 132 AF--IASTQGGMDIEEVAKDY 150
               I   Q G D  E  + Y
Sbjct: 208 FCPPIGHVQKGGDYRESWQPY 228


>gi|257898605|ref|ZP_05678258.1| carbamoyl-phosphate synthase [Enterococcus faecium Com15]
 gi|257836517|gb|EEV61591.1| carbamoyl-phosphate synthase [Enterococcus faecium Com15]
          Length = 1061

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A +    +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVAFANKIGYPVIV 168



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELGIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|253580243|ref|ZP_04857509.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848336|gb|EES76300.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 685

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 11/110 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
             L  ++  PV + +     HAAE   +   L    Y   + +    +       L  + 
Sbjct: 549 MELFERHGAPVEEKIFADMSHAAEEIAETLKLGEEEYETAAVVLRTEKEAEHMWLLLKEI 608

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            G             DI+E L        +   G  V   Y+  G +  +
Sbjct: 609 LGEKGF---------DIKERLSYLDRNSTSFKKGLTVTTFYLAKGLEFDQ 649


>gi|225849501|ref|YP_002729666.1| carbamoyl-phosphate synthase large chain, N- section
           (carbamoyl-phosphate synthetase ammonia chain)
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644401|gb|ACN99451.1| carbamoyl-phosphate synthase large chain, N- section
           (Carbamoyl-phosphate synthetase ammonia chain)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 559

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 53/165 (32%), Gaps = 37/165 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      + + K  V+ S+  AE  I  +  P+ +                    
Sbjct: 129 RDLFKKAMENIGLSMPKSAVVKSIAEAEEVIDWIGFPVII--------------RPSFTL 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG  +  + +     ++  L ++            ++ V +E+     +E  + ++ 
Sbjct: 175 GGTGG-SIAYNREEFYPKVKAGLDAS-----------PIHEVLLEESVIGWKEFEMEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
           D+       I S      IE +          + I P + ++  +
Sbjct: 223 DKNDNC-VIICS------IENLDPMGVHTGDSITIAPAMTLSDRE 260


>gi|68249475|ref|YP_248587.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae
           86-028NP]
 gi|68057674|gb|AAX87927.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae
           86-028NP]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALTYLREKGTPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|312891092|ref|ZP_07750615.1| carbamoyl-phosphate synthase, large subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311296400|gb|EFQ73546.1| carbamoyl-phosphate synthase, large subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 938

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 1   MNIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           M+I E + +   +L+  ++P  K  V  +   A      +  P+ V  S +  GG+G   
Sbjct: 666 MDIAEDRGRFSDMLKDLDIPYPKYGVAENAEEAIEVAHHVGYPVLVRPSYVL-GGQGMSI 724

Query: 59  FKELPADSKGGVRVESSL 76
                      V +  +L
Sbjct: 725 VINDEDLETAVVNLLKNL 742


>gi|331675491|ref|ZP_08376240.1| phosphoribosylamine--glycine ligase [Escherichia coli TA280]
 gi|331067369|gb|EGI38775.1| phosphoribosylamine--glycine ligase [Escherichia coli TA280]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEADAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|293570486|ref|ZP_06681541.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E980]
 gi|291609432|gb|EFF38699.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E980]
          Length = 1061

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A +    +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVAFANKIGYPVIV 168



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|257887481|ref|ZP_05667134.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,141,733]
 gi|257895976|ref|ZP_05675629.1| carbamoyl-phosphate synthase [Enterococcus faecium Com12]
 gi|293377434|ref|ZP_06623636.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           PC4.1]
 gi|257823535|gb|EEV50467.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,141,733]
 gi|257832541|gb|EEV58962.1| carbamoyl-phosphate synthase [Enterococcus faecium Com12]
 gi|292643952|gb|EFF62060.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           PC4.1]
          Length = 1061

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A +    +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVAFANKIGYPVIV 168



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|227551410|ref|ZP_03981459.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Enterococcus
           faecium TX1330]
 gi|227179419|gb|EEI60391.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Enterococcus
           faecium TX1330]
          Length = 1069

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A +    +  P+ V
Sbjct: 141 KQLMKELNQPIPESEIVNTVEEAVAFANKIGYPVIV 176



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 676 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 722


>gi|34592273|gb|AAQ76333.1| ATP citrate lyase beta [uncultured episymbiont of Alvinella
           pompejana]
          Length = 101

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 14/85 (16%)

Query: 294 ANFLDVGGGADQDKVAAAFKIIT------SDSSVKGILINIFGGIMRCDVLVK---GILS 344
           AN+ +  GG    +     + +        D   +G ++ I G I     + K   GI+ 
Sbjct: 17  ANYGEYSGGPTTGETKFYAETLLDLMTREKDPQGRGKVMIIGGAIANFTDVAKTFTGIIQ 76

Query: 345 AVKEV-----KINIPLVMRLEGANV 364
           A +       ++++ + +R  G N 
Sbjct: 77  AFENYADKMKEVDLKIYVRRGGPNY 101


>gi|167036618|ref|YP_001664196.1| D-alanyl-alanine synthetase A [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|167039269|ref|YP_001662254.1| D-alanyl-alanine synthetase A [Thermoanaerobacter sp. X514]
 gi|300913909|ref|ZP_07131226.1| D-alanine/D-alanine ligase [Thermoanaerobacter sp. X561]
 gi|307725406|ref|YP_003905157.1| D-alanine/D-alanine ligase [Thermoanaerobacter sp. X513]
 gi|320115045|ref|YP_004185204.1| D-alanine/D-alanine ligase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|190359215|sp|B0KBI1|DDL_THEP3 RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|190359216|sp|B0K485|DDL_THEPX RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|166853509|gb|ABY91918.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X514]
 gi|166855452|gb|ABY93860.1| D-alanine--D-alanine ligase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|300890594|gb|EFK85739.1| D-alanine/D-alanine ligase [Thermoanaerobacter sp. X561]
 gi|307582467|gb|ADN55866.1| D-alanine/D-alanine ligase [Thermoanaerobacter sp. X513]
 gi|319928136|gb|ADV78821.1| D-alanine/D-alanine ligase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 359

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 53/201 (26%), Gaps = 64/201 (31%)

Query: 9   KALLRKYNVPVAKGVVIS-----SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           K + ++  +P    VV+       + A +  I+ L  P +V               K   
Sbjct: 141 KRIFKEAGLPTPDFVVVYGKEIEDLEAIKKKIEHLGYPCFV---------------KPAN 185

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
             S  G+    + + +   ++                     + +E G D  RE+  S+L
Sbjct: 186 LGSSVGITKVHNEEELPGALK-------------LAAKYDRKLLIERGID-AREIECSVL 231

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            +                       + P+      I P       +          L   
Sbjct: 232 GN-----------------------ENPEASIAGEIVPSNEFYDYNAKYFDGGKSLLLIP 268

Query: 177 LELQGQARIDGGDLFPNLYKA 197
             L  +   +   L    YKA
Sbjct: 269 APLPDEKMEEVRKLAIKAYKA 289


>gi|309810682|ref|ZP_07704490.1| carbamoyl-phosphate synthase, large subunit [Dermacoccus sp.
           Ellin185]
 gi|308435313|gb|EFP59137.1| carbamoyl-phosphate synthase, large subunit [Dermacoccus sp.
           Ellin185]
          Length = 1102

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  +  +  S   A    + +  P+ V  S +  GGRG
Sbjct: 682 RVLADAKLPAPRHGIAFSAEEAIEVAREIGYPVLVRPSYVL-GGRG 726


>gi|309800149|ref|ZP_07694336.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116227|gb|EFO53716.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 388

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKAGVPVVPGAVIETEADVDKAVKEIDLPM 150


>gi|293413441|ref|ZP_06656101.1| phosphoribosylamine-glycine ligase [Escherichia coli B354]
 gi|291468036|gb|EFF10535.1| phosphoribosylamine-glycine ligase [Escherichia coli B354]
          Length = 433

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 158 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|326317896|ref|YP_004235568.1| CoA-binding domain-containing protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374732|gb|ADX47001.1| CoA-binding domain protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 702

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 83/232 (35%), Gaps = 33/232 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E +AKA+  ++ VP A   V+ +   AE+A   L G + V+K             +  
Sbjct: 482 LDEAEAKAVFARFGVPCAPERVVRTAAEAEAAALELGGRV-VLKI---------LSSRIT 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV V  + ++V   +  +       +     G R     V+       EL L  
Sbjct: 532 HKSDVGGVAVGLAPEAVGERLGRM-----ADEVEARAGERPERFLVQQMVAGGTELILG- 585

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
           L     G    +    GG+   E+ +D   ++       L  +  ED   +   L     
Sbjct: 586 LHRDALGTAVLLG--MGGV-TAELFQDTALRLLPERDGRLCPLAPEDALDMARSLKTWPL 642

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDKDMSL------LEINPLIIMKNGRLRV 221
               +G++R D   L   +  AF     +L       EINP+ ++  G+   
Sbjct: 643 LDGFRGRSRADVPALVQAIV-AFSAMAAALGERVAEAEINPVFVLAQGQGVC 693


>gi|257058868|ref|YP_003136756.1| cyanophycin synthetase [Cyanothece sp. PCC 8802]
 gi|256589034|gb|ACU99920.1| cyanophycin synthetase [Cyanothece sp. PCC 8802]
          Length = 877

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 15/106 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +PV KG  I      E+AI+ + G   V+K     G  G+G   ++ +    
Sbjct: 224 KTMLQDSGIPVPKGTTIQFFEDLENAIEDVGGFPIVIKP--LDGNHGRGITIDINSWDHA 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG-----SRVNCVYVE 109
                   +       +   +  +  +    G       VN   V 
Sbjct: 282 --------EEAYDFASKESKTRSVIIERYYKGSDHRLLVVNGKLVA 319


>gi|240170760|ref|ZP_04749419.1| carbamoyl phosphate synthase large subunit [Mycobacterium kansasii
           ATCC 12478]
          Length = 1117

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 694 DLLSTAGLPAPKYGTATTFAQARRIADEIGYPVLVRPSYVL-GGRG 738


>gi|237745560|ref|ZP_04576040.1| phosphoribosylglycinamide synthetase [Oxalobacter formigenes
           HOxBLS]
 gi|229376911|gb|EEO27002.1| phosphoribosylglycinamide synthetase [Oxalobacter formigenes
           HOxBLS]
          Length = 425

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 26/170 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+ + ++ +P AK    +    A   I     P+ VVK+   A G+             
Sbjct: 102 AKSFMERHGIPTAKYRTFTDAQQAHRYIDEQGAPI-VVKADGLAAGK------------- 147

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +     +  +L       + G  G+RV    +E+  +   E    +LVD  
Sbjct: 148 -GVVVALTSQQAHDAVDMMLF----DNKLGDAGARV---VIEEFLE-GEEASFIVLVDGK 198

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           + +   +A++Q    +++   + P         P   VT    A +   +
Sbjct: 199 NILP--LATSQDHKRLKD-GDEGPNTGGMGAFSPAPVVTPALHARILREI 245


>gi|229549802|ref|ZP_04438527.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis ATCC
           29200]
 gi|255972530|ref|ZP_05423116.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T1]
 gi|257079220|ref|ZP_05573581.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis JH1]
 gi|294779191|ref|ZP_06744600.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis PC1.1]
 gi|307269592|ref|ZP_07550930.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX4248]
 gi|312950887|ref|ZP_07769797.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0102]
 gi|229305071|gb|EEN71067.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis ATCC
           29200]
 gi|255963548|gb|EET96024.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis T1]
 gi|256987250|gb|EEU74552.1| phosphoribosylglycinamide synthetase [Enterococcus faecalis JH1]
 gi|294453751|gb|EFG22144.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis PC1.1]
 gi|306514065|gb|EFM82645.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX4248]
 gi|310631036|gb|EFQ14319.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0102]
 gi|315147475|gb|EFT91491.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX4244]
 gi|315152270|gb|EFT96286.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0031]
 gi|315157779|gb|EFU01796.1| phosphoribosylamine--glycine ligase [Enterococcus faecalis TX0312]
 gi|327535342|gb|AEA94176.1| phosphoribosylamine-glycine ligase [Enterococcus faecalis OG1RF]
          Length = 415

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+  V   +  A   I+    P+ V+K+   A G+G            
Sbjct: 107 AKDFMQKYQIPTAEYRVFRRLAPALEYIEQQGVPI-VIKADGLAAGKGVV---------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                   +    +  +  L + +  +Q G +G  V    +E+      E  L   V   
Sbjct: 156 --------VAETKTAAKRALVAMMEDQQFGVSGQTV---VIEEFLQ-GEEFSLMAFVSNE 203

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 204 KVYPMVIA 211


>gi|225181285|ref|ZP_03734730.1| carbamoyl-phosphate synthase, large subunit [Dethiobacter
           alkaliphilus AHT 1]
 gi|225168065|gb|EEG76871.1| carbamoyl-phosphate synthase, large subunit [Dethiobacter
           alkaliphilus AHT 1]
          Length = 1084

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 43/189 (22%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q   +L +   P+    ++SS+  A S       P+ V  +    G              
Sbjct: 134 QTMEMLNE---PIPASTIVSSIDDAVSFAAEAGYPVVVRPAYTMGG-------------- 176

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G    +  + + S             Q G   S +N + VE      +E+   ++ D 
Sbjct: 177 -TGGGFAADEEELRSTA-----------QRGLKASPINQILVEQSVAGWKEVEFEVMRDS 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLEL 179
               +  I S +   +I+ V       I   ++ P   +T ++          +   L +
Sbjct: 225 NDNCIT-ICSME---NIDPVGVHTGDSI---VVAPAQTLTDKEFQMLRNASLKIIRALGI 277

Query: 180 QGQARIDGG 188
           +G   I   
Sbjct: 278 EGGCNIQFA 286


>gi|218245822|ref|YP_002371193.1| cyanophycin synthetase [Cyanothece sp. PCC 8801]
 gi|218166300|gb|ACK65037.1| cyanophycin synthetase [Cyanothece sp. PCC 8801]
          Length = 877

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 15/106 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   +PV KG  I      E+AI+ + G   V+K     G  G+G   ++ +    
Sbjct: 224 KTMLQDSGIPVPKGTTIQFFEDLENAIEDVGGFPIVIKP--LDGNHGRGITIDINSWDHA 281

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTG-----SRVNCVYVE 109
                   +       +   +  +  +    G       VN   V 
Sbjct: 282 --------EEAYDFASKESKTRSVIIERYYKGSDHRLLVVNGKLVA 319


>gi|163857412|ref|YP_001631710.1| phosphoribosylamine--glycine ligase [Bordetella petrii DSM 12804]
 gi|163261140|emb|CAP43442.1| phosphoribosylamine--glycine ligase [Bordetella petrii]
          Length = 433

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P A+    +    A + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMVRHGIPTARYETFTDPTKAHAYIDEQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V + L+   + +  +LG        G  G     V +E+  
Sbjct: 152 -GVVVAADLEQAHAAVDAMLG-------DGSLGQAGARVVIEECL 188


>gi|121608773|ref|YP_996580.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121553413|gb|ABM57562.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 710

 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 78/227 (34%), Gaps = 26/227 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKEL 62
           E QAK +L++  V +    +  S   A +    +  P+   +V + I             
Sbjct: 493 EAQAKQMLQQAGVRLMPNALAKSADEALAHAGRIGYPVVAKIVSADI------------A 540

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED-GADILRELYLS 121
                GGV+V     + +      + ST+  +Q    G+R+  + +E   A    EL + 
Sbjct: 541 HKSDIGGVQVGLRDAAQLQAAWHTIMSTVTARQ---PGARIAGLLIEKMAAPGSVELMIG 597

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQ 180
           +  D   G V       GG+ +E +     + +     D    V    V +L        
Sbjct: 598 VTRDPVFGHVLTFG--LGGIYVELLRHVTRRLLPIAARDAAAMV--HTVRALLGGARGQP 653

Query: 181 GQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
                   +L   +          +  LE+NP+ +   G+    LD+
Sbjct: 654 PADIAALEELLVRISDFVLRHADRIEELELNPVWVGAKGQGAIPLDA 700


>gi|294648726|ref|ZP_06726186.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Acinetobacter haemolyticus ATCC 19194]
 gi|292825401|gb|EFF84144.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 373

 Score = 39.9 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K+L  +  +PVA    + S+ + + A+  L  P+ V+K+ + AG  GKG+F     D
Sbjct: 102 KSLFDELGIPVAPYRAVDSIDSLKQAVTDLGLPI-VLKT-VTAGYDGKGQFVLRSED 156


>gi|222617927|gb|EEE54059.1| hypothetical protein OsJ_00755 [Oryza sativa Japonica Group]
          Length = 629

 Score = 39.9 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+ K    K+ +P+   V + ++ + E A +    PL V   ++   GRG          
Sbjct: 172 YRQKTHFSKFGIPLPDFVEVDTLSSIEKAGEMFGYPLMVKSKRLAYDGRGNA-------- 223

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 V    K + S +  + G               + +YVE     ++EL + +   
Sbjct: 224 ------VAHDKKELSSVVASLGGFE-------------HGLYVERWTSFVKELSVIVARS 264

Query: 126 RTSGMVAF----IASTQGGMDIEEVAKDYPQKIFKLL 158
           R    V +             + E   + P KI KL 
Sbjct: 265 RDGSTVCYPVVETIHKDNICHVVEAPAEVPDKIKKLA 301


>gi|325129261|gb|EGC52100.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           OX99.30304]
          Length = 423

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGARV---VIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|322371021|ref|ZP_08045574.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549456|gb|EFW91117.1| acetyl-CoA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 724

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 79/229 (34%), Gaps = 36/229 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A++LL  ++VP  +  + +    A +++ ++PG   V+K                  D+
Sbjct: 515 EAESLLSAFDVPTVETRLATDADEAAASVASIPGS-AVLKIDSPEL--------PHRTDA 565

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
              +    S         ++    +   Q+    S +  V V+   D   E  + +    
Sbjct: 566 GAVMLGVDSPMDAREAYDDV----VSAAQSHVDDSDIEGVLVQPMVDDGVETMVGVAPGD 621

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR-- 184
               +  + +  GG+ +E +           L+ P    +  D         L+      
Sbjct: 622 VFDSLVTVGA--GGVLVEALDDSA------TLVPP---FSRSDARRAVKETVLEDLLIDR 670

Query: 185 --------IDGGDLFPNLYKAFCDKDMSL-LEINPLIIMKNGRLRVLDS 224
                       DL  N+       D  + L++NP+++ ++G +  +D+
Sbjct: 671 RDGDSLPVDRVVDLLVNVGGLAHSVDSVVELDLNPVVVTEDGPI-AVDA 718


>gi|257464969|ref|ZP_05629340.1| carbamoylphosphate synthase large subunit/ATP-dependent
           carboxylate-amine ligase [Actinobacillus minor 202]
 gi|257450629|gb|EEV24672.1| carbamoylphosphate synthase large subunit/ATP-dependent
           carboxylate-amine ligase [Actinobacillus minor 202]
          Length = 392

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VAKG V      A    K L  P+ +
Sbjct: 119 QMKEVFRKAGLKVAKGRVFKDDEDARKLAKELKFPVII 156


>gi|224418065|ref|ZP_03656071.1| phosphoribosylamine--glycine ligase [Helicobacter canadensis MIT
           98-5491]
          Length = 312

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 22/101 (21%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           +KY +P A+ +       A   I +L  P+ VVK+     G+              GV +
Sbjct: 2   KKYGIPTAQFIQTQDYKEACDFIDSLNLPI-VVKADGLCAGK--------------GVVI 46

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
             S +   S +R++L      K  G +G     V +E+  D
Sbjct: 47  AQSYEEAKSVVRDMLE----GKSFGDSGK---KVVIEEFLD 80


>gi|196230537|ref|ZP_03129399.1| phosphoribosylamine/glycine ligase [Chthoniobacter flavus Ellin428]
 gi|196225467|gb|EDY19975.1| phosphoribosylamine/glycine ligase [Chthoniobacter flavus Ellin428]
          Length = 422

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    S    A+   +    P  VVK+   A G+             
Sbjct: 106 AKEFMERHGIPTARSGSFSDSSDAQRFCQKAKHP-LVVKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV +  +       + EI    +  ++ G  G     V +E+  +
Sbjct: 152 -GVIIAQNSWEAGLAVHEI----MDVRKFGDAGK---QVLIEEFLE 189


>gi|159905087|ref|YP_001548749.1| CoA-binding domain-containing protein [Methanococcus maripaludis
           C6]
 gi|159886580|gb|ABX01517.1| CoA-binding domain protein [Methanococcus maripaludis C6]
          Length = 702

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 13/103 (12%)

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKI--- 351
           N LD+ G AD ++   AF+++ +D +V G+L  +     +      G+   + ++K    
Sbjct: 346 NPLDLIGDADVNRYKHAFELVENDPNVDGLLAIL---TPQGMTDALGVARELVKLKNYMI 402

Query: 352 ----NIPLVMR-LEGANVDIGNRLIAESGLNVITAIDLDDAAQ 389
                IP+V   + G +V      + E G+      +L  A +
Sbjct: 403 CKKDKIPIVASFVGGTSVLEARSYLQEKGIPSFICPEL--AVK 443


>gi|157413412|ref|YP_001484278.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9215]
 gi|157387987|gb|ABV50692.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9215]
          Length = 1098

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K NV V    + S +  A    K +     +++     GG G G           
Sbjct: 133 KESMEKINVNVCPSGIASDLDEAMEVSKEISSYPLIIRPAFTLGGVGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +L+  +   +           +G   S  N + +E      +E  L ++ D  +
Sbjct: 182 ---IAFNLEEFVELCK-----------SGLEESPSNQILIEKSLIGWKEYELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|149926397|ref|ZP_01914658.1| cyanophycin synthetase [Limnobacter sp. MED105]
 gi|149824760|gb|EDM83974.1| cyanophycin synthetase [Limnobacter sp. MED105]
          Length = 870

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K +L    +P  +G ++ +   A  A + L        V+K     G +GKG    +  +
Sbjct: 210 KTILSAAGIPTPRGKLVKTFEEALEAFRELTKATNKGVVIKP--SDGNQGKGVTVNIVDE 267

Query: 66  S 66
            
Sbjct: 268 E 268


>gi|309812876|ref|ZP_07706608.1| CoA binding domain protein [Dermacoccus sp. Ellin185]
 gi|308433154|gb|EFP57054.1| CoA binding domain protein [Dermacoccus sp. Ellin185]
          Length = 887

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 7/105 (6%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV--VKSQIHAGGRGKGRFKELPADSK 67
            LL    + V   V   S   A  A + L  P+ V  +  Q+            L AD +
Sbjct: 674 QLLALARISVWPSVPARSPKEAVDAAEELGFPVVVKSIAPQV-----RHQVASALRADLR 728

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
             + V  + +++   + E      + ++    G   +   VED  
Sbjct: 729 SPLAVVEAYEALAERLEEYGPDQFVVQKMATPGIGCSVTSVEDPL 773


>gi|258622705|ref|ZP_05717724.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258585018|gb|EEW09748.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 893

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDSIYEKLNQTLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +A  I+    ++  ILI +    I   +   + ++ A+++        +  
Sbjct: 354 GDADHQRYISALNILLESETIDAILIMHSPSAIAHSEQTAQALVEAIQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          +  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTIFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|219871725|ref|YP_002476100.1| carbamoylphosphate synthase large subunit (split gene in
           MJ)/ATP-dependent carboxylate-amine ligase
           domain-containing protein [Haemophilus parasuis SH0165]
 gi|219691929|gb|ACL33152.1| carbamoylphosphate synthase large subunit/ATP-ependent
           carboxylate-amine ligase domain-containing protein
           [Haemophilus parasuis SH0165]
          Length = 392

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VAKG V      A    K L  P+ +
Sbjct: 119 QMKEVFRKAGLKVAKGRVFKDDEDARKLAKELKFPVII 156


>gi|21226595|ref|NP_632517.1| Acetyl-CoA synthetase subunit beta [Methanosarcina mazei Go1]
 gi|20904871|gb|AAM30189.1| Acetyl-CoA synthetase, beta subunit [Methanosarcina mazei Go1]
          Length = 250

 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 28/229 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSKG 68
           +L  Y +PV K V   +   A  A + +  PL   VV  QI              +D  G
Sbjct: 42  ILEAYGIPVVKTVFAKTEEEAVKAAEEMGYPLVMKVVSPQI-----------SHKSDVGG 90

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 S   V +     LG      +  P  + +  V ++       E+ + ++ D  +
Sbjct: 91  IRLSLQSGDEVRAA---YLGMMEKIPEKRPD-AVLEGVQIQKMLSGGNEVIIGMIRD-PT 145

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKI----FKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
                +    GG+ +E + KD    I     K   + + G+ +  +  L      +    
Sbjct: 146 FGPMLMFGL-GGVYVE-ILKDVRFAIAPVNEKEAREMIKGIKAYPL--LAGARGAKPSDI 201

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFDDN 231
               D    + +  CD  ++   EINP+++++ G+    +D +++   N
Sbjct: 202 DALVDAILRISRLVCDFPEIEEFEINPMMVLEEGKGAFAVDMRLTLKKN 250


>gi|308234824|ref|ZP_07665561.1| carbamoyl-phosphate synthase large chain [Gardnerella vaginalis
           ATCC 14018]
          Length = 582

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K         AK  +  S+   +  ++TL  P+ V         R       L +
Sbjct: 129 RELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVV---------RPSFTMGGLGS 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +                 G   S  N V +E+G +  +E  L L+ 
Sbjct: 180 G------IAHNQEELHRIAGA-----------GIHYSPTNEVLIEEGIEGWKEFELELM- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R S     +      +D   V       I    + P   +T  +   + D+
Sbjct: 222 -RDSKDNVVVVCPIENVDP--VGVHTGDSI---TVAPCFTLTDREYQKMRDI 267


>gi|254361688|ref|ZP_04977825.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Mannheimia
           haemolytica PHL213]
 gi|261491742|ref|ZP_05988322.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495508|ref|ZP_05991955.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|153093210|gb|EDN74221.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Mannheimia
           haemolytica PHL213]
 gi|261308842|gb|EEY10098.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261312581|gb|EEY13704.1| carbamoyl phosphate synthase large subunit [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 1068

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 43/159 (27%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  S   A +A + +  P  +             R       S G
Sbjct: 133 KEAMTKIGLNTPKSFVCHSFEEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    I+               G   S  + + +E      +E  + ++ DR  
Sbjct: 180 GI--AYNRDEFIAICER-----------GFEASPTHELLIEQSVLGWKEYEMEVVRDRAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIIV-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|150400093|ref|YP_001323860.1| pyruvate carboxylase subunit A [Methanococcus vannielii SB]
 gi|150012796|gb|ABR55248.1| acetyl-CoA carboxylase, biotin carboxylase [Methanococcus vannielii
           SB]
          Length = 506

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VPV  G    I +   A    + +  P+ ++K+    GG G      +  +
Sbjct: 119 AKKAMKDAGVPVLPGREEPIENEEDAILVAEEIGYPV-IIKASAGGGGIGM----NVVYN 173

Query: 66  SKGGVRVESSLKSVISDI 83
            +  V   +S KS+    
Sbjct: 174 KEELVDTINSTKSIAQSA 191


>gi|152996999|ref|YP_001341834.1| phosphoribosylamine--glycine ligase [Marinomonas sp. MWYL1]
 gi|150837923|gb|ABR71899.1| phosphoribosylamine--glycine ligase [Marinomonas sp. MWYL1]
          Length = 428

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + IK    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYGNFTEIEPAVAYIKQHGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV +  +    I  + ++L         G  G   + V +E+        ++ ++
Sbjct: 154 GVILAQTEAEAIEAVEDMLQ----GNSFGDAG---SRVVIEEFLVGEEASFICMV 201


>gi|20090986|ref|NP_617061.1| carbamoyl phosphate synthase large subunit [Methanosarcina
           acetivorans C2A]
 gi|22095502|sp|Q8TNY4|CARB_METAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|19916073|gb|AAM05541.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing), large subunit
           [Methanosarcina acetivorans C2A]
          Length = 1070

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 68/220 (30%), Gaps = 53/220 (24%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++        V +   + ++  AE  ++ L  PL V  +    G            
Sbjct: 129 RELFKETMLRIGEKVPQSRAVHTLKEAEEVVEELGLPLIVRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  + + ++      L  +           R++ V +E+      E+   ++ 
Sbjct: 177 ---AGGGIARTKEELLEITERGLRRS-----------RISQVLIEESVLGWAEVEYEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDML 177
           D     +          ++E +           ++ P   +T  +          +   L
Sbjct: 223 DANDTCIVI-------CNMENIDPMGVHTGESAVVAPSQTLTDAEHQMLRSASIKIIRAL 275

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +++G   I           A  + D  ++E+NP +   + 
Sbjct: 276 KIEGGCNIQY---------ALKEGDYRIVEVNPRVSRSSA 306



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 1   MNIHE-----YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           M++ E     Y    L++K+ +   +G   +S H A    + +  P+ V  S +  G   
Sbjct: 662 MDLAEDREKFYV---LMQKFGILQPEGGYATSQHEAIEVAQRIGFPVLVRPSYVLGGRAM 718

Query: 56  KGRFKELPADSKGGVRVESSLK 77
           +  + E+  +      V  S +
Sbjct: 719 EIVYDEIDLERYMKEAVRVSPE 740


>gi|315634700|ref|ZP_07889984.1| phosphoribosylamine-glycine ligase [Aggregatibacter segnis ATCC
           33393]
 gi|315476648|gb|EFU67396.1| phosphoribosylamine-glycine ligase [Aggregatibacter segnis ATCC
           33393]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A S ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALSYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|315645244|ref|ZP_07898369.1| phosphoribosylamine/glycine ligase [Paenibacillus vortex V453]
 gi|315279286|gb|EFU42592.1| phosphoribosylamine/glycine ligase [Paenibacillus vortex V453]
          Length = 422

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KY++P A         AA + ++    P+ VVK+   A G+              
Sbjct: 107 KDLLHKYSIPTAAYAKFDDYEAALAYLRQQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     + +I    + +K  G  G   + V +E+  +  +E+ +   VD  +
Sbjct: 152 GVTVARTLEEAEQALSDI----MQSKVFGDAG---SRVVIEEFLE-GQEMSILAFVDGET 203

Query: 129 GMVA 132
               
Sbjct: 204 VKPM 207


>gi|312884770|ref|ZP_07744471.1| phosphoribosylamine--glycine ligase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367683|gb|EFP95234.1| phosphoribosylamine--glycine ligase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 427

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A   ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTASYENFTEIEPAIDYVRKHGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + I+++L         G  G RV    +E+  +   E    ++VD  S
Sbjct: 154 GVIVAMTLDEAETAIKDMLA----GNAFGEAGHRV---VIEEFLE-GEEASFIVMVDGQS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|262164170|ref|ZP_06031908.1| protein acetyltransferase [Vibrio mimicus VM223]
 gi|262026550|gb|EEY45217.1| protein acetyltransferase [Vibrio mimicus VM223]
          Length = 893

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDSIYEKLNQTLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +A  I+    ++  ILI +    I   +   + ++ A+++        +  
Sbjct: 354 GDADHQRYISALNILLESETIDAILIMHSPSAIAHSEQTAQALVEAIQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          +  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTIFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|164654965|ref|XP_001728615.1| hypothetical protein MGL_4240 [Malassezia globosa CBS 7966]
 gi|159102495|gb|EDP41401.1| hypothetical protein MGL_4240 [Malassezia globosa CBS 7966]
          Length = 794

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 26/110 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESA---IKTLPGPL-YVVKSQIHAGGRGKGRFKELP 63
           AK  + ++ +P A      +    E     I+ L G    V+K+   AGG+         
Sbjct: 114 AKDFMARHQIPTAAYR-TFTADQVEECYEFIRELGGAKSVVLKASGLAGGK--------- 163

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                GV +  +       + ++L    + K  G  G     + +E+  D
Sbjct: 164 -----GVILPDTDDEARQGVEDLL----VRKVFGNAGDF---LIIEERLD 201


>gi|53718800|ref|YP_107786.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           K96243]
 gi|76811790|ref|YP_332794.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1710b]
 gi|126455187|ref|YP_001065518.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1106a]
 gi|167737791|ref|ZP_02410565.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 14]
 gi|167814977|ref|ZP_02446657.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 91]
 gi|167844941|ref|ZP_02470449.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           B7210]
 gi|167910168|ref|ZP_02497259.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 112]
 gi|242315360|ref|ZP_04814376.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1106b]
 gi|254261544|ref|ZP_04952598.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1710a]
 gi|254298482|ref|ZP_04965934.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           406e]
 gi|52209214|emb|CAH35159.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           K96243]
 gi|76581243|gb|ABA50718.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1710b]
 gi|126228829|gb|ABN92369.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1106a]
 gi|157808156|gb|EDO85326.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           406e]
 gi|242138599|gb|EES25001.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1106b]
 gi|254220233|gb|EET09617.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1710a]
          Length = 425

 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYLDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|322374564|ref|ZP_08049078.1| LOW QUALITY PROTEIN: hypothetical protein HMPREF0849_00279
          [Streptococcus sp. C300]
 gi|321280064|gb|EFX57103.1| LOW QUALITY PROTEIN: hypothetical protein HMPREF0849_00279
          [Streptococcus sp. C300]
          Length = 331

 Score = 39.9 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 9  KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
          K L +K +VPV  G VI +    + A+K +  P+
Sbjct: 60 KKLFKKADVPVVPGAVIQTEADVDKAVKEIGLPM 93


>gi|167854917|ref|ZP_02477693.1| DNA mismatch repair protein [Haemophilus parasuis 29755]
 gi|167853984|gb|EDS25222.1| DNA mismatch repair protein [Haemophilus parasuis 29755]
          Length = 392

 Score = 39.9 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VAKG V      A    K L  P+ +
Sbjct: 119 QMKEVFRKAGLKVAKGRVFKDDEDARKLAKELKFPVII 156


>gi|171463027|ref|YP_001797140.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171192565|gb|ACB43526.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 454

 Score = 39.9 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 112/337 (33%), Gaps = 53/337 (15%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G    +     +A K +  P+ +  +                 
Sbjct: 119 AKRAMIKAGVPCVPGSEGAPPDNPKEIIAAAKKVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E+ L + ++  RE  G      +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAHLINAVNMTREEAGRAFGNPE----------VYMEKFLEKPRHVEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LELQGQA 183
           D     +        G     + + + + I +    P  G+    +A + +   E   + 
Sbjct: 217 DTHGNAIWL------GERDCSMQRRHQKVIEEA---PAPGIDRRLIAKIGERCAEACRKI 267

Query: 184 RIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
              G   F  LY+     F + +  +   +P+  M  G  +     +I+      YR  D
Sbjct: 268 GYRGAGTFEFLYENGEFFFIEMNTRVQVEHPVTEMITGVDIVQEQIRIAAGLKLSYRQKD 327

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGC--MVNGAGLAMATMDIIKLYGGAPANF 296
           I   R  + E     E       +    G IG   M  G G+ + +          P+N+
Sbjct: 328 IV-FRGHAIECRLNAE---DPFKFTPSPGKIGSFHMPGGPGIRVDSHAYSGYV--VPSNY 381

Query: 297 LDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
             + G     G  +++     +I  S+  + GI  N+
Sbjct: 382 DSMIGKLISYGNTREQAIRRMQIALSEMVIDGITTNV 418


>gi|115435108|ref|NP_001042312.1| Os01g0199900 [Oryza sativa Japonica Group]
 gi|56202109|dbj|BAD73201.1| putative phosphoribosylaminoimidazole carboxylase, chloroplast
           precursor [Oryza sativa Japonica Group]
 gi|66274576|dbj|BAD98622.1| putative phosphoribosylaminoimidazole carboxylase, chloroplast
           precursor [Oryza sativa Japonica Group]
 gi|113531843|dbj|BAF04226.1| Os01g0199900 [Oryza sativa Japonica Group]
 gi|215686919|dbj|BAG90789.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 631

 Score = 39.9 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+ K    K+ +P+   V + ++ + E A +    PL V   ++   GRG          
Sbjct: 172 YRQKTHFSKFGIPLPDFVEVDTLSSIEKAGEMFGYPLMVKSKRLAYDGRGNA-------- 223

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 V    K + S +  + G               + +YVE     ++EL + +   
Sbjct: 224 ------VAHDKKELSSVVASLGGFE-------------HGLYVERWTSFVKELSVIVARS 264

Query: 126 RTSGMVAF----IASTQGGMDIEEVAKDYPQKIFKLL 158
           R    V +             + E   + P KI KL 
Sbjct: 265 RDGSTVCYPVVETIHKDNICHVVEAPAEVPDKIKKLA 301


>gi|325280706|ref|YP_004253248.1| Pyruvate carboxylase [Odoribacter splanchnicus DSM 20712]
 gi|324312515|gb|ADY33068.1| Pyruvate carboxylase [Odoribacter splanchnicus DSM 20712]
          Length = 494

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK +  +  VP+       + ++  A    K L  P+ ++K+    GGRG
Sbjct: 120 AKGIAAQSGVPMLGASQGAVHTLDEARKIAKRLGYPV-IIKAVSGGGGRG 168


>gi|258626981|ref|ZP_05721780.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580734|gb|EEW05684.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 893

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDSIYEKLNQTLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +A  I+    ++  ILI +    I   +   + ++ A+++        +  
Sbjct: 354 GDADHQRYISALNILLESETIDAILIMHSPSAIAHSEQTAQALVEAIQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          +  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTIFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|311894810|dbj|BAJ27218.1| putative carbamoyl-phosphate synthase large chain [Kitasatospora
           setae KM-6054]
          Length = 1102

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LR   +P  K     S   A++    +  P+    S +  GGRG
Sbjct: 683 RVLRDAGLPAPKHGTAFSFEEAKAIADEIGYPVLARPSYVL-GGRG 727


>gi|258591242|emb|CBE67539.1| conserved hypothetical protein; putative Glutathione synthase,
           possibly involved in H4MPT biosynthesis (homologous to
           orf5 of M. extorquens AM1) [NC10 bacterium 'Dutch
           sediment']
          Length = 291

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           LL    +P  + +V      A +A+  L     VVK    AGGRG
Sbjct: 108 LLASRGLPTPRTIVAEGFDEAMAALCELG--DVVVKPLFGAGGRG 150


>gi|269215064|ref|ZP_05987668.2| phosphoribosylamine--glycine ligase [Neisseria lactamica ATCC
           23970]
 gi|269208380|gb|EEZ74835.1| phosphoribosylamine--glycine ligase [Neisseria lactamica ATCC
           23970]
          Length = 452

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 135 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 180

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 181 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 211


>gi|225872350|ref|YP_002753805.1| carbamoyl-phosphate synthase, large subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|254813553|sp|C1F1S6|CARB_ACIC5 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|225793736|gb|ACO33826.1| carbamoyl-phosphate synthase, large subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 1093

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P  +G   +SV  A ++ + +  P+ V  S +  G
Sbjct: 690 KLLEQLQIPQPQGATATSVEEALASAERIGYPVLVRPSYVLGG 732


>gi|184200074|ref|YP_001854281.1| phosphoribosylamine--glycine ligase [Kocuria rhizophila DC2201]
 gi|183580304|dbj|BAG28775.1| phosphoribosylamine--glycine ligase [Kocuria rhizophila DC2201]
          Length = 455

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 36/106 (33%), Gaps = 28/106 (26%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   +VP A+ V  S +     A +    P YVVK    A G+             
Sbjct: 106 AKEVMAAADVPTARAVATSDLAQVREAFEQFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V    +   +  RE L            G     V VE+  D
Sbjct: 152 -GVVVTDDRERAEAHARECLD---------AGG----SVLVEEFLD 183


>gi|124484966|ref|YP_001029582.1| pyruvate carboxylase subunit A [Methanocorpusculum labreanum Z]
 gi|124362507|gb|ABN06315.1| pyruvate carboxylase subunit A [Methanocorpusculum labreanum Z]
          Length = 500

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            +K  +    VPV      +    A++  +++  P+ +VK+    GG G           
Sbjct: 123 DSKQAMHDAGVPVLPWTQSTDHDEAKAFAESIGYPV-IVKASAGGGGIGMTIVNNEAELD 181

Query: 67  KGGVRVESSLKSV 79
           +   +   +  S 
Sbjct: 182 EAIAKSSRTAASA 194


>gi|119716658|ref|YP_923623.1| carbamoyl-phosphate synthase large subunit [Nocardioides sp. JS614]
 gi|119537319|gb|ABL81936.1| carbamoyl-phosphate synthase large subunit [Nocardioides sp. JS614]
          Length = 1143

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L +  +P  K  + +S   A+     +  P+ V  S +  GGRG
Sbjct: 726 LHEAGLPAPKHGMATSFAEAKEIADEIGFPVLVRPSYVL-GGRG 768


>gi|145588397|ref|YP_001154994.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046803|gb|ABP33430.1| acetyl-CoA carboxylase, biotin carboxylase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 454

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 113/337 (33%), Gaps = 53/337 (15%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +  +     +  K +  P+ +  +                 
Sbjct: 119 AKRAMIKAGVPCVPGSEGALPDNPKEIIATAKKVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  +E  G      +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALLNAVNMTKEEAGRAFGNPE----------VYMEKFLEKPRHVEIQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LELQGQA 183
           D     +        G     + + + + I +    P  G+    +A + +   E   + 
Sbjct: 217 DTHGNAIWL------GERDCSMQRRHQKVIEEA---PAPGIDRRLIAKIGERCAEACRKI 267

Query: 184 RIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
              G   F  LY+     F + +  +   +P+  M  G  +     +I+      YR  D
Sbjct: 268 GYRGAGTFEFLYENNEFFFIEMNTRVQVEHPVTEMITGVDIVQEQIRIAAGLKLAYRQKD 327

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGC--MVNGAGLAMATMDIIKLYGGAPANF 296
           I   R  + E     E       +    G IG   M  G G+ + +          P+N+
Sbjct: 328 IV-FRGHAIECRLNAE---DPFKFTPSPGRIGSFHMPGGPGIRVDSHAYSGYV--VPSNY 381

Query: 297 LDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
             + G     G  +++     +I  S+  + GI  N+
Sbjct: 382 DSMIGKLISYGNTREQAIRRMQIALSEMVIDGITTNV 418


>gi|148543327|ref|YP_001270697.1| carbamoyl phosphate synthase large subunit [Lactobacillus reuteri
           DSM 20016]
 gi|184152735|ref|YP_001841076.1| carbamoyl phosphate synthase large subunit [Lactobacillus reuteri
           JCM 1112]
 gi|227364395|ref|ZP_03848487.1| carbamoyl phosphate synthase large subunit [Lactobacillus reuteri
           MM2-3]
 gi|325683594|ref|ZP_08163110.1| carbamoyl-phosphate synthase [Lactobacillus reuteri MM4-1A]
 gi|167006441|sp|A5VHN6|CARB_LACRD RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|226700932|sp|B2G564|CARB_LACRJ RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|148530361|gb|ABQ82360.1| carbamoyl-phosphate synthase large subunit [Lactobacillus reuteri
           DSM 20016]
 gi|183224079|dbj|BAG24596.1| carbamoylphosphate synthase large subunit [Lactobacillus reuteri
           JCM 1112]
 gi|227070581|gb|EEI08912.1| carbamoyl phosphate synthase large subunit [Lactobacillus reuteri
           MM2-3]
 gi|324977944|gb|EGC14895.1| carbamoyl-phosphate synthase [Lactobacillus reuteri MM4-1A]
          Length = 1056

 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ +   PV     +++V  A         P+ V
Sbjct: 133 KELMNELGEPVPASQTVNTVDEAVEFAHQCGYPVIV 168


>gi|330007670|ref|ZP_08306010.1| CoA binding domain protein [Klebsiella sp. MS 92-3]
 gi|328535393|gb|EGF61874.1| CoA binding domain protein [Klebsiella sp. MS 92-3]
          Length = 883

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 67/223 (30%), Gaps = 24/223 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + ++       
Sbjct: 541 YLRTAAEVQQAADAMIDRVKLAWPQARIHGLLVQSMANRAG---AQELRV-VVEHDPVFG 596

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
              +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 597 PLIML-GEGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGL 694


>gi|322831467|ref|YP_004211494.1| GCN5-related N-acetyltransferase [Rahnella sp. Y9602]
 gi|321166668|gb|ADW72367.1| GCN5-related N-acetyltransferase [Rahnella sp. Y9602]
          Length = 906

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 31/225 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   + +L+ Y + V    + S    A +    +  P+ +         + +    
Sbjct: 481 LDTHE--VRPILQAYGMNVLPTWIASDSAEAVNIASQVGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I         Q    G  V  +    G+   +EL 
Sbjct: 530 PHNSEVQGVMLYLRTASEVAQAANAIFDRARQAFPQARILGLLVQTMANRPGS---QELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLE 178
           + +  D   G +  +A  +GG D        P++   + + PL + +    V       +
Sbjct: 587 VVVEQDPVFGPLIMLA--EGGTDW------RPERQAAISLPPLNMTLARYQVVQALKSGK 638

Query: 179 ------LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
                 L          L  N+     D  ++  L+I+PL+I  +
Sbjct: 639 IRGRHALHPLDIPALSQLLVNVSNLIIDCPEIERLDIHPLLISGS 683


>gi|261856916|ref|YP_003264199.1| phosphoribosylamine/glycine ligase [Halothiobacillus neapolitanus
           c2]
 gi|261837385|gb|ACX97152.1| phosphoribosylamine/glycine ligase [Halothiobacillus neapolitanus
           c2]
          Length = 428

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 20/96 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++ +P A   V +    A   ++    P+ VVK+   A G+             
Sbjct: 108 SKDFLARHRIPTAMYRVFTEAAPAIDYVREHGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  S+    + I ++LG      Q G  G+RV
Sbjct: 154 -GVIVAQSVAEAEAAINDMLG-----GQFGEAGARV 183


>gi|221633497|ref|YP_002522722.1| Lysine biosynthesis protein LysX [Thermomicrobium roseum DSM 5159]
 gi|221156389|gb|ACM05516.1| Lysine biosynthesis enzyme LysX [Thermomicrobium roseum DSM 5159]
          Length = 294

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            LL    +P  + +V   V +A +A++ L  P  V+K    + GR
Sbjct: 97  RLLAAAGIPTLRTLVAFDVESALAALERLGYP-AVIKPVTGSWGR 140


>gi|168061790|ref|XP_001782869.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665647|gb|EDQ52324.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1084

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +      +  ++       + +     +++     GG G G           
Sbjct: 120 KKAMAKIGINSPPSGIAHTMDQCFEIAERIGEFPLIIRPAFTLGGTGGG----------- 168

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L +++ +            V VE      +E  L ++ D  +
Sbjct: 169 ---IAYNKEEFETICKAGLSASINS-----------QVLVEKSLLGWKEYELEVMRD-LA 213

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  I S +   +I+ +       I    + P   +T ++   L D 
Sbjct: 214 DNVVIICSIE---NIDSMGVHTGDSI---TVAPAQTLTDKEYQRLRDQ 255


>gi|150015946|ref|YP_001308200.1| phosphoribosylamine--glycine ligase [Clostridium beijerinckii NCIMB
           8052]
 gi|149902411|gb|ABR33244.1| phosphoribosylamine--glycine ligase [Clostridium beijerinckii NCIMB
           8052]
          Length = 416

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+    + V+ A   ++  P P  VVK+   A G+             
Sbjct: 106 SKEFMKKYGVKTAEYETFTDVNEALKYLEVCPYPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +  I  ++    S ++       G     + +E+  + +    LS+ 
Sbjct: 152 -GVAICETKEEAIEAVK----SYMVDDIFNGAGQ---KIVIEEFLEGVEASILSIT 199


>gi|262173767|ref|ZP_06041444.1| protein acetyltransferase [Vibrio mimicus MB-451]
 gi|261891125|gb|EEY37112.1| protein acetyltransferase [Vibrio mimicus MB-451]
          Length = 893

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDSIYEKLNQALPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +A  I+    ++  ILI +    I   +   + ++ A+++        +  
Sbjct: 354 GDADHQRYISALNILLESETIDAILIMHSPSAIAHSEQTAQALVEAIQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          +  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTIFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|224812401|gb|ACN64839.1| PokAC2 [Streptomyces diastatochromogenes]
          Length = 470

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 72/215 (33%), Gaps = 39/215 (18%)

Query: 11  LLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           L+    +P+  G +  +SS   AE+    +  P+ VVK+              +      
Sbjct: 122 LMADAGLPLLPGTLDPVSSPREAEAFAAEIGYPV-VVKA--------------VAGGGGR 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+ V  S     +  RE           G        VY+E      R + + +L DR  
Sbjct: 167 GIGVAHSADEFPAVYRETRRHAAAVFGDG-------RVYLERYLQSARHVEIQILADRFG 219

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG- 187
            ++        G     V + + + I +    P  G+  + +A++ +      +A     
Sbjct: 220 NVIHL------GERDCSVQRRHQKLIEET---PAPGLDRDVLAAMAEHAVQGAKAAGYVG 270

Query: 188 GDLFPNLYK-----AFCDKDMSLLEINPLIIMKNG 217
              F  LY       F + +  +   +P+  M  G
Sbjct: 271 AGTFEFLYDDSGRFYFMEVNCRIQVEHPVTEMVTG 305


>gi|157691397|ref|YP_001485859.1| phosphoribosylamine--glycine ligase [Bacillus pumilus SAFR-032]
 gi|157680155|gb|ABV61299.1| phosphoribosylamine--glycine ligase [Bacillus pumilus SAFR-032]
          Length = 424

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++ Y++P A     +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLMKNYDIPTAAYATFTSFEEAKAYVEEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L   I+ + + L       +    G     V +E+      E  L   V+  
Sbjct: 152 -GVTVAMTLDEAINCLHDFL-------EDEKFGDASASVVIEEFLT-GEEFSLMAFVNGD 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 KVYPMVIA 210


>gi|227543792|ref|ZP_03973841.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
           reuteri CF48-3A]
 gi|300908860|ref|ZP_07126323.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus reuteri
           SD2112]
 gi|112945585|gb|ABI26395.1| carbamoylphosphate synthase large subunit [Lactobacillus reuteri]
 gi|227186219|gb|EEI66290.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
           reuteri CF48-3A]
 gi|300894267|gb|EFK87625.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus reuteri
           SD2112]
          Length = 1056

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ +   PV     +++V  A         P+ V
Sbjct: 133 KELMNELGEPVPASQTVNTVDEAVEFAHQCGYPVIV 168


>gi|254190601|ref|ZP_04897108.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254195051|ref|ZP_04901480.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei S13]
 gi|157938276|gb|EDO93946.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651799|gb|EDS84492.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei S13]
          Length = 425

 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYLDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|307709194|ref|ZP_07645653.1| hypothetical protein SMSK564_0440 [Streptococcus mitis SK564]
 gi|307620140|gb|EFN99257.1| hypothetical protein SMSK564_0440 [Streptococcus mitis SK564]
          Length = 388

 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 5/97 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + ++K +  P+ + K     G      FK    D   
Sbjct: 117 KKLFKKAGVPVVPGAVIKTEADVDQSVKEIGLPM-IAKPDNGVG--AAATFKLETEDDIN 173

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ--TGPTGSRV 103
             + E    +V    + +  S + T        G  V
Sbjct: 174 HFKAEWDHSTVYFFEKFVTSSEICTFDGLVDKDGKIV 210


>gi|295098841|emb|CBK87930.1| acetyl-CoA carboxylase, biotin carboxylase [Eubacterium
           cylindroides T2-87]
          Length = 455

 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 14/81 (17%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+ L+++  VPV +G    + SV  A++  +++  P+ ++K+                 
Sbjct: 118 QARKLMKEAGVPVVEGCEDALKSVEDAKNMAESIGYPV-IIKA-----------RLGGGG 165

Query: 65  DSKGGVRVESSLKSVISDIRE 85
                V     L++  ++ R+
Sbjct: 166 RGMRIVYKAEDLENAYTEARQ 186


>gi|238896033|ref|YP_002920769.1| putative NAD(P)-binding and ATP-binding acyl-CoA synthetase
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238548351|dbj|BAH64702.1| putative NAD(P)-binding and ATP-binding acyl-CoA synthetase
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 883

 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 67/223 (30%), Gaps = 24/223 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + ++       
Sbjct: 541 YLRTAAEVQQAADAMIDRVKLAWPQARIHGLLVQSMANRAG---AQELRV-VVEHDPVFG 596

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
              +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 597 PLIML-GEGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGL 694


>gi|220905583|ref|YP_002480895.1| phosphoribosylamine--glycine ligase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869882|gb|ACL50217.1| phosphoribosylamine/glycine ligase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP A+  V S V  A + +  + GP  VVK+   A G+G      + ADS+
Sbjct: 107 AKEIMARAKVPTAQSAVFSDVEMARNHVAKVGGP-LVVKADGLAAGKG----VIMAADSQ 161

Query: 68  GGVRVESSLKSVISD 82
             ++  + + S  + 
Sbjct: 162 EALQAVNDIMSARAF 176


>gi|33595234|ref|NP_882877.1| putative acyl-CoA synthetase [Bordetella parapertussis 12822]
 gi|33565311|emb|CAE36111.1| putative acyl-CoA synthetase [Bordetella parapertussis]
          Length = 710

 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 13/104 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +Y + V +G V ++     +A + L  P  V         + +     L      
Sbjct: 501 KRLLGRYGIRVNEGRVAATPDEVAAAAQALRAPYVVKVISEDISHKTEVGGVRLGLADGP 560

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            VR        +    ++              +RV+   V++  
Sbjct: 561 AVRAA-----AVEMAAQVRQKR--------PDARVDGFLVQEFV 591


>gi|15895902|ref|NP_349251.1| carbamoyl phosphate synthase large subunit [Clostridium
           acetobutylicum ATCC 824]
 gi|22095520|sp|Q97FT3|CARB_CLOAB RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|15025672|gb|AAK80591.1|AE007762_1 Carbamoylphosphate synthase large subunit [Clostridium
           acetobutylicum ATCC 824]
          Length = 1065

 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL++ N+P AKG+ ++S+  A  A+K +  P+ V  S +  G
Sbjct: 674 ELLKELNIPQAKGMAVTSMEEAYEAVKEIGYPVIVRPSYVIGG 716


>gi|331266669|ref|YP_004326299.1| hypothetical protein SOR_1302 [Streptococcus oralis Uo5]
 gi|326683341|emb|CBZ00959.1| conserved hypothetical protein [Streptococcus oralis Uo5]
          Length = 388

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI +    + A+  +  P+ + K     G      FK    D   
Sbjct: 117 KKLFQKAGVPVVPGAVIQTEADVDKAVNEIGLPM-IAKPDNGVG--AAATFKLETEDDVN 173

Query: 69  GVRVESS 75
             + E  
Sbjct: 174 HFKAEWD 180


>gi|325510054|gb|ADZ21690.1| carbamoyl phosphate synthase large subunit [Clostridium
           acetobutylicum EA 2018]
          Length = 1065

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL++ N+P AKG+ ++S+  A  A+K +  P+ V  S +  G
Sbjct: 674 ELLKELNIPQAKGMAVTSMEEAYEAVKEIGYPVIVRPSYVIGG 716


>gi|302037857|ref|YP_003798179.1| carbamoyl-phosphate synthase large subunit [Candidatus Nitrospira
           defluvii]
 gi|300605921|emb|CBK42254.1| Carbamoyl-phosphate synthase, large subunit [Candidatus Nitrospira
           defluvii]
          Length = 1089

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 48/164 (29%), Gaps = 33/164 (20%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           K  + V    V +S+  AE  ++ +  P  V                       GG  + 
Sbjct: 138 KIGLRVPDSGVATSLAEAERELERIRFPAIV--------------RPSFTMGGTGG-NIA 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            +++   + +   L  +            V  V +E      +E  L ++  R       
Sbjct: 183 YNIEEFRTQVEWGLSMS-----------PVRQVLIEQSVIGWKEFELEVM--RDLKDNVV 229

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           I        IE +          + + P + +T ++   L D  
Sbjct: 230 IICP-----IENLDPMGVHTGDSITVAPALTLTDKEYQMLRDAA 268


>gi|301019446|ref|ZP_07183619.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 69-1]
 gi|300399261|gb|EFJ82799.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 69-1]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|288576076|ref|ZP_05978146.2| phosphoribosylamine--glycine ligase [Neisseria mucosa ATCC 25996]
 gi|288566352|gb|EFC87912.1| phosphoribosylamine--glycine ligase [Neisseria mucosa ATCC 25996]
          Length = 444

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 127 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 172

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 173 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 203


>gi|149184930|ref|ZP_01863247.1| phosphoribosylglycinamide formyltransferase 2 [Erythrobacter sp.
           SD-21]
 gi|148831041|gb|EDL49475.1| phosphoribosylglycinamide formyltransferase 2 [Erythrobacter sp.
           SD-21]
          Length = 396

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 37/170 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  +K     ++    +A +    P  V+K  + + G+G+             VR E+ 
Sbjct: 127 GLVTSKYRYAKNLDEVRAAAEHTGFPC-VIKPVMSSSGKGQST-----------VREEAK 174

Query: 76  LKSVISDI-REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF- 133
           L+         + G                 V VE   D   E  ++LL  R +G V F 
Sbjct: 175 LEEAWDYACANMRGDR-------------QRVIVEQFVDFDYE--ITLLTVRHNGSVTFC 219

Query: 134 --IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
             I   Q   D +E  +         + D  I    +    + D L   G
Sbjct: 220 PPIGHRQERGDYQESWQ------PTAMTDTAIAKAQDMARKVVDDLGGYG 263


>gi|313888024|ref|ZP_07821702.1| phosphoribosylamine--glycine ligase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845979|gb|EFR33362.1| phosphoribosylamine--glycine ligase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 414

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 22/114 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L KY++P AK     S   AE  ++    P  VVK+                     GV 
Sbjct: 110 LEKYSIPTAKYKSFESYDHAEKGLEEFSYP-LVVKAD--------------GLCFGKGVI 154

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +       +  + +I    +   Q        N V +E+         L L+ +
Sbjct: 155 ICRDRDEAVDALEKIFKDKIFGDQG-------NTVVIEEFLTGEEASVLCLVSN 201


>gi|289582903|ref|YP_003481369.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Natrialba
           magadii ATCC 43099]
 gi|289532456|gb|ADD06807.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Natrialba
           magadii ATCC 43099]
          Length = 404

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 30/110 (27%), Gaps = 30/110 (27%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L    VPV     +       +AI     P+ ++K+            +    D +G
Sbjct: 113 KQELESAGVPVPPFRAVEDADDIRAAIDDYGAPV-MLKA------------RTGGYDGRG 159

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            V    S       +  + G                   VE   D  RE+
Sbjct: 160 NV-PVESADEAEDALESVAGPA----------------MVEAFVDFEREI 192


>gi|189464669|ref|ZP_03013454.1| hypothetical protein BACINT_01012 [Bacteroides intestinalis DSM
           17393]
 gi|189436943|gb|EDV05928.1| hypothetical protein BACINT_01012 [Bacteroides intestinalis DSM
           17393]
          Length = 424

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++ +P A  K +   ++    + ++TL  P YV+K+     G+           
Sbjct: 110 AKGFMERHGIPTARYKSINAENLEEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G     V +E+   
Sbjct: 158 ---GVLILPTLEEAKKELKEMLGGMF--------GQASATVVIEEFLS 194


>gi|116512308|ref|YP_809524.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116107962|gb|ABJ73102.1| phosphoribosylamine--glycine ligase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 413

 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK++++KY VP A      S+  A S +K    P+ V+K+   A G+             
Sbjct: 107 AKSIMKKYGVPTADYATFDSLEPALSHLKQHGVPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   + S    + +I         +G  G  V    +E+  D       S +   
Sbjct: 153 -GVTVAFDIASAQVALADIF--------SGSQGKVV----IEEFLDGEEFSLFSFVHQG 198


>gi|329962731|ref|ZP_08300654.1| phosphoribosylamine--glycine ligase [Bacteroides fluxus YIT 12057]
 gi|328529565|gb|EGF56468.1| phosphoribosylamine--glycine ligase [Bacteroides fluxus YIT 12057]
          Length = 424

 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++N+P A  K V   +++   + ++TL  P YV+K+     G+           
Sbjct: 110 AKEFMQRHNIPTARYKSVTAQTLNEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G     V +E+   
Sbjct: 158 ---GVLILPTLEEAQKELKEMLGGMF--------GDASATVVIEEFLS 194


>gi|311898788|dbj|BAJ31196.1| putative acyl-CoA synthetase [Kitasatospora setae KM-6054]
          Length = 924

 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 231 NALYRHLDIQELRDVSEE-DSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
           +AL++   +  +  ++E  D+ E+ A Q     +   G +  + N   L + T D     
Sbjct: 474 DALFQQAGVIRVDTITELFDTGELLAGQP----LPQGGRVAVVGNSDSLGLLTYDTCLSA 529

Query: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGIL 325
           G  P   +D+  GA  +    A     +D     ++
Sbjct: 530 GLRPRTPVDLTTGASGENFRIALDTALADPHTDAVI 565


>gi|281201784|gb|EFA75992.1| propionyl-CoA carboxylase [Polysphondylium pallidum PN500]
          Length = 692

 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 84/265 (31%), Gaps = 32/265 (12%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K + +   V V  G +  + ++        ++  P+ V  S                 
Sbjct: 151 ESKKIAKNAGVSVIPGFIGEVDTLEEVIKTANSIGYPVMVKAS---------------AG 195

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + K V     EI       +     G   + + +E   D  R + + +L 
Sbjct: 196 GGGKGMRIAWNDKDV-----EIGFRLSKQEAKSSFGD--DRMLIEKYIDRGRHIEIQVLS 248

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D  +     +   +    I+   +   ++     +D           A+LC  +  +   
Sbjct: 249 DGETA----LYFPERECSIQRRNQKVIEEAPSPFLDDATRTAMGRQAAALCKAVGYKSAG 304

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
            ++   D   N Y  F + +  L   +P+     G+  V           L    +  ++
Sbjct: 305 TVEFLVDSQKNFY--FLEMNTRLQVEHPITEEITGQDLVEHMIRIAYGEKLKLQQEDVKI 362

Query: 243 RDVSEEDSREIEAKQHNLSYIALDG 267
           +  + E     E    +  YI  +G
Sbjct: 363 KGWAMESRVYAEDPYQSKKYIRPEG 387


>gi|262040317|ref|ZP_06013568.1| GNAT family acetyltransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042426|gb|EEW43446.1| GNAT family acetyltransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 883

 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 69/223 (30%), Gaps = 24/223 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + +  D   G 
Sbjct: 541 YLRTAAEVQQAADAMIDRVKLAWPQARIHGLLVQSMANRAG---AQELRVVVEHDPVFGP 597

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
           +  +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 598 LIMLG--EGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGL 694


>gi|269124720|ref|YP_003298090.1| CoA-binding domain-containing protein [Thermomonospora curvata DSM
           43183]
 gi|268309678|gb|ACY96052.1| CoA-binding domain protein [Thermomonospora curvata DSM 43183]
          Length = 690

 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 32/80 (40%), Gaps = 11/80 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            + LL K  +   + + + +   A +  +++ GP +V+K+           + E   +  
Sbjct: 483 GRDLLAKAGLSYPRAIAVWTPEEAGTVARSMTGP-FVLKA----------GWLEHKTELG 531

Query: 68  GGVRVESSLKSVISDIREIL 87
           G         +V + + +++
Sbjct: 532 GVAVGLPDADAVRAALADMI 551


>gi|152971438|ref|YP_001336547.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956287|gb|ABR78317.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 883

 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 69/223 (30%), Gaps = 24/223 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR Y +      + +    A    + +  P+ +         + +       ++ +G + 
Sbjct: 490 LRAYGIHTLPTWIAADSAEAVHIAEQIGYPVAL---------KLRSPDIPHKSEVQGVML 540

Query: 72  VESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
              +   V      ++    L   Q    G  V  +    G    +EL + +  D   G 
Sbjct: 541 YLRTAAEVQQAADAMIDRVKLAWPQARIHGLLVQSMANRAG---AQELRVVVEHDPVFGP 597

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLELQGQARID 186
           +  +   +GG++      +    +    ++  +     + +     +     L+      
Sbjct: 598 LIMLG--EGGVEWR---AEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAG 652

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
              L   +     D  ++  L+I+PL+   N     LD  +  
Sbjct: 653 LSQLLVQVSNLIVDCPEIQRLDIHPLLASGN-EFTALDVTLGL 694


>gi|330685486|gb|EGG97139.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus
           epidermidis VCU121]
          Length = 1057

 Score = 39.9 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LL   +VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLHTIDVPQPQGKTATSPKEALENARNIGYPVVVRPSYVL-GGRAMEIVDNDKE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|332284809|ref|YP_004416720.1| phosphoribosylamine--glycine ligase [Pusillimonas sp. T7-7]
 gi|330428762|gb|AEC20096.1| phosphoribosylamine--glycine ligase [Pusillimonas sp. T7-7]
          Length = 429

 Score = 39.9 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 22/110 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++N+P A     +    A++ I     P+ VVK+   A G+             
Sbjct: 106 AKAFMVRHNIPTAAYQTFTDPAQAKTYITQQGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADI 114
            GV V + L      I  +LG        G  G+RV    C+  E+ + I
Sbjct: 152 -GVVVATDLAQAHDAIDMMLG----DGSFGAAGARVVVEECLMGEEASFI 196


>gi|298490157|ref|YP_003720334.1| phosphoribosylamine/glycine ligase ['Nostoc azollae' 0708]
 gi|298232075|gb|ADI63211.1| phosphoribosylamine/glycine ligase ['Nostoc azollae' 0708]
          Length = 428

 Score = 39.9 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 24/128 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+++  VP A   V     AA+S ++    P+ V+K+   A G+             
Sbjct: 108 AKALMQEAGVPTATAAVFRESAAAKSYLQAQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++   S I      T+   Q G  G   N V +E+   + +E+ +  L D  
Sbjct: 154 -GVTVAETIEQAESAID-----TIFQGQFGSAG---NFVVIEECL-LGQEVSVLALTDGL 203

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 204 TIRPLLPA 211


>gi|239636317|ref|ZP_04677319.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus warneri
           L37603]
 gi|239597672|gb|EEQ80167.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus warneri
           L37603]
          Length = 1057

 Score = 39.9 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 3/99 (3%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E++A  LL   +VP  +G   +S   A    + +  P+ V  S +  GGR          
Sbjct: 669 EFEA--LLHTIDVPQPQGKTATSPKEALENARNIGYPVVVRPSYVL-GGRAMEIVDNDKE 725

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                 +   +       +   L    I       G  V
Sbjct: 726 LENYMTQAVKASPEHPVLVDRYLTGKEIEVDAISDGETV 764


>gi|157144483|ref|YP_001451802.1| hypothetical protein CKO_00200 [Citrobacter koseri ATCC BAA-895]
 gi|157081688|gb|ABV11366.1| hypothetical protein CKO_00200 [Citrobacter koseri ATCC BAA-895]
          Length = 886

 Score = 39.9 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 85/269 (31%), Gaps = 39/269 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLHTLPTWIAGDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTATEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVAS 172
           + +  D   G +  +   +GG++        P++   + + PL       + +       
Sbjct: 587 VVVEHDPVFGPLIMLG--EGGVEW------RPEEQAVVALPPLNMNLARYLVIQGIKSKK 638

Query: 173 LCDMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF--- 228
           +     L+         L   +     D  ++  L+I+PL+    G    LD  +     
Sbjct: 639 IRGRSALRPLDITGLSQLLVQVSNLIVDCPEIQRLDIHPLLASA-GEFTALDVTLDIAPY 697

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAKQ 257
           D +   R      +R   ++    +E K 
Sbjct: 698 DGDNESR----LAIRPYPQQLEEWVEMKN 722


>gi|149194561|ref|ZP_01871657.1| Biotin carboxylase-like protein [Caminibacter mediatlanticus TB-2]
 gi|149135305|gb|EDM23785.1| Biotin carboxylase-like protein [Caminibacter mediatlanticus TB-2]
          Length = 476

 Score = 39.9 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  ++K  +PV +G    I  +  AE   K +  P+ ++K+    GGR           
Sbjct: 119 SKTAMKKVGMPVLEGTEEPIIDIKEAEKIAKQIGFPV-IIKAAFGGGGR----------- 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S +            ++     G        V++E   +  R + + +L D
Sbjct: 167 ---GMRIVRSEEEFKELFEAATSESMKFFGRGE-------VFIEKYVENPRHIEVQILAD 216

Query: 126 RTSGMV 131
               ++
Sbjct: 217 THGNVI 222


>gi|315221721|ref|ZP_07863637.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           anginosus F0211]
 gi|315189208|gb|EFU22907.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           anginosus F0211]
          Length = 1059

 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  N+P   G   ++   A  A   +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLNIPQPPGQTATNEEEAVVAASKIGFPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A      +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEEAVDFAAKIGYPVIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCANEEELREIAENGLKLSPVTQC 204


>gi|269137915|ref|YP_003294615.1| CoA binding domain/acetyltransferase domain protein [Edwardsiella
           tarda EIB202]
 gi|267983575|gb|ACY83404.1| CoA binding domain/acetyltransferase domain protein [Edwardsiella
           tarda EIB202]
 gi|304557967|gb|ADM40631.1| Protein acetyltransferase [Edwardsiella tarda FL6-60]
          Length = 890

 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 17/144 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   + +L  Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHE--VRDILACYGLDTLPSWIANDSTEAVHIAERIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELY 119
              +D +G +    + + V      I       +Q  P    +  +       I  +EL 
Sbjct: 530 AHNSDVQGVMLYLRNAREVEQAANAIFDR---ARQAYPQARILGLLVQSTANRIGAQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDI 143
           + +  D   G +  +   +GG + 
Sbjct: 587 ICVENDAVFGPLILLG--EGGAEW 608


>gi|308510831|ref|XP_003117598.1| hypothetical protein CRE_00603 [Caenorhabditis remanei]
 gi|308238244|gb|EFO82196.1| hypothetical protein CRE_00603 [Caenorhabditis remanei]
          Length = 991

 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 24/118 (20%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++Y +P A  V +S  +V + +S  + +P    VVK+   A G+           
Sbjct: 121 SKQFMKEYGLPTADFVTVSVENVKSLDSVFERIPWKNTVVKADGLAAGK----------- 169

Query: 66  SKGGVRVESSLKSVISDIREIL-------GSTLITKQTGPTGSRVNCVYVEDGADILR 116
              GV +    +      R IL       G T+I ++    G  V+ +   DG    R
Sbjct: 170 ---GVIIPKDNEEAKLAARSILEGEFGSAGRTIILEERL-EGYEVSSLAFVDGISYKR 223


>gi|291549064|emb|CBL25326.1| phosphoribosylamine--glycine ligase [Ruminococcus torques L2-14]
          Length = 423

 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +   AA + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDPKAAVAYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +   L+   + ++EI    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICKDLEEAKAGVKEI----MLDKKFGTAG---NEMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKTMTSAQD 212


>gi|226227962|ref|YP_002762068.1| hypothetical protein GAU_2556 [Gemmatimonas aurantiaca T-27]
 gi|226091153|dbj|BAH39598.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 329

 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+   +P  K   I+    A  A + L  P+ V K+ +  GG G G  K    ++   
Sbjct: 108 DLLQSLGLPYPKSRAINHASQAVKAAEGLRYPVLV-KANV--GGSGAGIVKYESREALEA 164

Query: 70  VRVESSLK 77
                ++ 
Sbjct: 165 AVAAGTVD 172


>gi|46849437|dbj|BAD17928.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Polypterus ornatipinnis]
          Length = 992

 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 14/85 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A+    +S   A S I++   P  VVK+   A G+             
Sbjct: 94  SKAFMDRHGIPTARWKSFTSAQEACSFIESADFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLI 92
            GV V  + +     +R+IL   + 
Sbjct: 141 -GVIVAGTKEEACKAVRDILQDKVF 164


>gi|271966689|ref|YP_003340885.1| carbamoyl-phosphate synthase L chain, ATP- binding protein
           [Streptosporangium roseum DSM 43021]
 gi|270509864|gb|ACZ88142.1| carbamoyl-phosphate synthase L chain, ATP- binding protein
           [Streptosporangium roseum DSM 43021]
          Length = 1829

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +  K  VPVA      + ++  A++A   +  P  ++K+    GGRG          
Sbjct: 124 SKLIAEKVGVPVAPWSRGPVETLEDAKAAADRIGYP-LMLKATAGGGGRGIRMVSN---- 178

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTG-SRVNCVYVEDG 111
                 +  + +    +     GS ++  +   TG   V    + DG
Sbjct: 179 ---ADELTQAYELTRREAERAFGSGVVFLERLVTGARHVEVQVIADG 222


>gi|262273287|ref|ZP_06051102.1| phosphoribosylamine--glycine ligase [Grimontia hollisae CIP 101886]
 gi|262222660|gb|EEY73970.1| phosphoribosylamine--glycine ligase [Grimontia hollisae CIP 101886]
          Length = 429

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + IR++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAENAIRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|254586403|ref|XP_002498769.1| ZYRO0G18128p [Zygosaccharomyces rouxii]
 gi|238941663|emb|CAR29836.1| ZYRO0G18128p [Zygosaccharomyces rouxii]
          Length = 1115

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 42/220 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ NVP+A      ++     A + +  P+ +  +    G                G  
Sbjct: 157 LQEINVPIATSFACETLDETLKAAEEVKYPVIIRSAYALGGL---------------GSG 201

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++   +     + L  +               + VE      +E+   ++ DR    +
Sbjct: 202 FANNPTELRDLASQSLSLS-------------PQILVEKSLKGWKEVEYEVVRDRVGNCI 248

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            ++  P   ++ E+          +   L + G+  
Sbjct: 249 TV-------CNMENFDPLGIHTGDSIVFAPSQTLSDEEYHMLRTAAIKIIRHLGVVGECN 301

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
           +        L     + +  L   + L     G      +
Sbjct: 302 VQYALQPDGLDFRVIEVNARLSRSSALASKATGYPLAYTA 341


>gi|126699812|ref|YP_001088709.1| putative acetyl-CoA synthetase [Clostridium difficile 630]
 gi|115251249|emb|CAJ69080.1| putative succinyl-CoA synthetase-like ATP-binding protein
           [Clostridium difficile]
          Length = 699

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 13/101 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++KY VPV       S+   +  +K +  P+ V+K                 +D  G   
Sbjct: 492 MKKYGVPVPGQGNAKSIDELDEILKYIKYPV-VLKI--------NSSEILHKSDVGGVKI 542

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
              +    +    EIL       +     + ++ + V++  
Sbjct: 543 GIKNRDEAVDAYNEIL----TNVKKAKPDANIDGILVQEMV 579


>gi|325523583|gb|EGD01878.1| phosphoribosylamine--glycine ligase [Burkholderia sp. TJI49]
          Length = 426

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      S  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFSDTAAAHAYIDAKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSDNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|316972570|gb|EFV56243.1| WD domain, G-beta repeat-containing domain protein [Trichinella
           spiralis]
          Length = 1002

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 12/111 (10%)

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD-LF 191
            I  + G + I  +  D    I + ++   IG   E+ A +   L   G       + + 
Sbjct: 34  LIYCSFGNV-INVLNWDTGSVICRHIVRQTIGSKEEEAAIVQFSLSCDGGTLAVAYENML 92

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL 242
             L+    D          L    NG++  + S+      A  RH D+  +
Sbjct: 93  LKLWNLAAD----------LKKCPNGKIVKIASRSCVHCMAYGRHPDLAHM 133


>gi|315641577|ref|ZP_07896645.1| ATP-grasp domain protein [Enterococcus italicus DSM 15952]
 gi|315482618|gb|EFU73146.1| ATP-grasp domain protein [Enterococcus italicus DSM 15952]
          Length = 391

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 16/122 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K++ R   +PVA G V S    A S    L  P+ +VK      G G G   +L  ++  
Sbjct: 118 KSVFRNIGLPVANGRVFSDAEDALSLANDLHYPV-IVKPD---NGVGAGDTFKLDDEAAL 173

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ--TGPTGSRV--------NCVYVEDGADILREL 118
              + +  +     + E +   ++T    T   G  V          V   +  +   E+
Sbjct: 174 THFLANHAQESTYIMEEFIPGEMVTFDGLTNQEGEIVFYSSLTYNAAVL--ETVEHDEEM 231

Query: 119 YL 120
           Y 
Sbjct: 232 YF 233


>gi|24379315|ref|NP_721270.1| carbamoyl phosphate synthase large subunit [Streptococcus mutans
           UA159]
 gi|81845295|sp|Q8DUP3|CARB_STRMU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|24377237|gb|AAN58576.1|AE014927_5 carbamoylphosphate synthetase, large subunit [Streptococcus mutans
           UA159]
          Length = 1059

 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  N+P   G   ++   A ++ + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLNIPQPPGQTATNEEEAVASARKIGFPVLVRPSYVLGG 714


>gi|332796571|ref|YP_004458071.1| lysine biosynthesis enzyme LysX [Acidianus hospitalis W1]
 gi|332694306|gb|AEE93773.1| lysine biosynthesis enzyme LysX [Acidianus hospitalis W1]
          Length = 283

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           A+L ++N+ V K  V  S   A      L  P  V+K    + GR   +  +
Sbjct: 94  AILSRHNIKVPKTAVAFSKDKALEVASKLGYP-AVIKPIEGSWGRMVAKAVD 144


>gi|300864858|ref|ZP_07109706.1| phosphoribosylamine--glycine ligase [Oscillatoria sp. PCC 6506]
 gi|300337151|emb|CBN54856.1| phosphoribosylamine--glycine ligase [Oscillatoria sp. PCC 6506]
          Length = 424

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 21/113 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  +P AK    +   +A++ I     P+ VVK+   A G+             
Sbjct: 108 AKDLMLEAGIPTAKSGTFTDADSAKAYIAVQGVPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITK------QTGPTGSRVNCVYVEDGADI 114
            GV V ++L+   S I  I G    T+      +   +G  V+ + + DG  I
Sbjct: 154 -GVTVATTLEMAESAIDAIFGGEFGTENIRAVVEEFLSGQEVSILALTDGLTI 205


>gi|294676468|ref|YP_003577083.1| propionyl-CoA carboxylase subunit alpha [Rhodobacter capsulatus SB
           1003]
 gi|294475288|gb|ADE84676.1| propionyl-CoA carboxylase, alpha subunit [Rhodobacter capsulatus SB
           1003]
          Length = 661

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 95/332 (28%), Gaps = 44/332 (13%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L ++  V    G   +I+    A      +  P+ +  S                  
Sbjct: 113 SKKLAQEAGVSTVPGYMGLIADADEAVKISDQIGYPVMIKAS---------------AGG 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + +      +        +K         + +++E      R + + +L D
Sbjct: 158 GGKGMRIAWNAEEAREGFQ-------SSKNEAAASFGDDRIFIEKFVTQPRHIEIQVLAD 210

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           +    V      +    I+   +   ++     +DP       E   +L   +       
Sbjct: 211 QHGNCVYL---NERECSIQRRNQKVIEEAPSPFLDPATRKAMGEQACALAKAVGYTSAGT 267

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI--- 239
           ++   D   N Y  F + +  L   +P+  +  G  L  +  +++  +   ++  DI   
Sbjct: 268 VEFIVDGNRNFY--FLEMNTRLQVEHPVTELITGIDLVEMMIRVAAGEPLPFKQEDIGIN 325

Query: 240 -QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
              +      +                   +       G+     D     GG  + + D
Sbjct: 326 GWAMESRLYAEDPYRNFLPSIGRLTKYQPPVEGPTASGGI--VRNDTGVYEGGEISMYYD 383

Query: 299 ------VGGGADQDKVAAAFKIITSDSSVKGI 324
                    G  ++      ++      V+GI
Sbjct: 384 PMIAKLCTWGPTREAAIEEMRLALDTFEVEGI 415


>gi|229824730|ref|ZP_04450799.1| hypothetical protein GCWU000182_00078 [Abiotrophia defectiva ATCC
           49176]
 gi|229791059|gb|EEP27173.1| hypothetical protein GCWU000182_00078 [Abiotrophia defectiva ATCC
           49176]
          Length = 1073

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 18/107 (16%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +L +  +P A G  + +   A      L  P+ V  S +  G                G+
Sbjct: 674 ILNETGIPRASGGTVFTAEEAVEVANRLGYPVLVRPSYVLGG---------------AGM 718

Query: 71  RVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
           R+  S   +   I  I  +     I       G  +    V DG DI
Sbjct: 719 RIAISDSDIREYINIINRNVQEHPILVDKYLMGEELEVDAVCDGEDI 765


>gi|224368786|ref|YP_002602947.1| SucD3 [Desulfobacterium autotrophicum HRM2]
 gi|223691502|gb|ACN14785.1| SucD3 [Desulfobacterium autotrophicum HRM2]
          Length = 708

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 17/128 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPADSK 67
            LL  Y        +  +   A      +  P+   +V  QI              +D+K
Sbjct: 497 ELLACYGFKTLDMALAKTRAEAIQIAGRIGYPVVMKIVSEQIL-----------HKSDAK 545

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +    +         +I+ +     +   + ++++ V V++ A   RE+ L +  D  
Sbjct: 546 AVMVGIVTPDEAGEAFDKIMAN----AEAYNSMAKLDGVLVQESAKKGREVILGVSRDDV 601

Query: 128 SGMVAFIA 135
            G      
Sbjct: 602 FGHAVMFG 609



 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 20/177 (11%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMV------NGAGLAMA 281
           F  + + R   + EL D ++  + +       ++ +   G  G +       +G  LA  
Sbjct: 275 FFQSGIVRCHTVNELFDYAQALAAKKIPNGDKIAIVTNAGGPGIIATDMSENSGLSLARF 334

Query: 282 TMDII-KLYGGAP--ANF---LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRC 335
           + + I +L+   P  ANF   +DV G A +D+       + SD  V G+LI +     + 
Sbjct: 335 SDETISELHKYLPPTANFHNPVDVIGDAARDRYENTLATVLSDPGVDGVLIIL---TPQS 391

Query: 336 DVLVKGILSAVKEVKIN--IPLVMRLEG-ANVDIGNRLIAESGLNVITAIDLDDAAQ 389
                G   A+  +  N   P+V    G  +V  G +L+  + + V      + AA+
Sbjct: 392 MTDAMGTAEAIVNIARNAIKPIVCSFMGVVDVSDGVKLLQRNHVPVYQFP--ESAAR 446


>gi|195384840|ref|XP_002051120.1| GJ13961 [Drosophila virilis]
 gi|194147577|gb|EDW63275.1| GJ13961 [Drosophila virilis]
          Length = 1346

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    + V+ A+  I+  P    VVK+   A G+             
Sbjct: 114 AKDFMLRHGIPTARYESFTDVNKAKKFIRNAPYRALVVKAAGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V +      + + EILG  
Sbjct: 161 -GVVVAAHEDEACAAVDEILGRL 182


>gi|145588802|ref|YP_001155399.1| phosphoribosylamine--glycine ligase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047208|gb|ABP33835.1| phosphoribosylamine--glycine ligase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 425

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A     S+   A + I +   P+ V+K+   A G+             
Sbjct: 110 SKAFMKRHGIPTADYQTFSNATQAHAYIDSKGAPI-VIKADGLAAGK------------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  + +   + +       L   + G  G+RV    +E+  
Sbjct: 156 -GVVVAMNPEEAHAAVD----MMLADNKLGNAGARV---VIEEFL 192


>gi|71275272|ref|ZP_00651559.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Dixon]
 gi|71900142|ref|ZP_00682283.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Ann-1]
 gi|170731274|ref|YP_001776707.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Xylella
           fastidiosa M12]
 gi|71164081|gb|EAO13796.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Dixon]
 gi|71730091|gb|EAO32181.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Ann-1]
 gi|167966067|gb|ACA13077.1| Phosphoribosylaminoimidazole carboxylase [Xylella fastidiosa M12]
          Length = 394

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 27/122 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L R   +PV   V + +  A + AI  +  P  ++K++   G  GKG+F+        
Sbjct: 103 KTLFRDLGIPVPDFVAVDNRAALDVAIVKVGTPC-ILKTR-RFGYDGKGQFR-------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++  +   +  +    +LG     +Q G TG     + +E      RE  +S+L  R  
Sbjct: 153 -IKTLTDADAAWA----MLG-----EQAGITG-----LILEAFVPFQRE--MSILAVRGC 195

Query: 129 GM 130
             
Sbjct: 196 NG 197


>gi|329117301|ref|ZP_08246018.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326907706|gb|EGE54620.1| carbamoyl-phosphate synthase, large subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 1058

 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E     +L++ N+P   G   ++   A    + +  P+ V  S +  G
Sbjct: 668 DLFE----KVLKELNIPQPPGQTATNEDEAIQVARKIGFPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ +   P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMEELGQPIPESKIVNTVDQAVDFAAKIGFPIIV 168


>gi|307209224|gb|EFN86331.1| Trifunctional purine biosynthetic protein adenosine-3 [Harpegnathos
           saltator]
          Length = 1008

 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 18/96 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++N+P A+    +S   A+  +KT P    VVK+   A G+             
Sbjct: 111 AKQFMDRHNIPTARWQGFTSAADAQKFVKTAPFKALVVKASGLAAGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  + +     I E+L     +K+ G  G  +
Sbjct: 158 -GVVVAKNQEEACQAIDEML----TSKKFGAAGETI 188


>gi|229104509|ref|ZP_04235176.1| Pyruvate carboxylase [Bacillus cereus Rock3-28]
 gi|228678951|gb|EEL33161.1| Pyruvate carboxylase [Bacillus cereus Rock3-28]
          Length = 1148

 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    I S+   E   +    P+ ++K+ +  GGRG           +    +  
Sbjct: 134 IPVIPGSDGPIDSIEEVEEFAEKYDYPI-IIKASLGGGGRGM-------RIVRASEELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLF 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRRRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K     +   +E+NP + ++
Sbjct: 283 LVK---GDEFYFIEVNPRVQVE 301


>gi|221632662|ref|YP_002521883.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Thermomicrobium roseum DSM 5159]
 gi|221155993|gb|ACM05120.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Thermomicrobium roseum DSM 5159]
          Length = 369

 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK 46
           K L     +PV +   ISS      AI+T+P P  V+K
Sbjct: 102 KQLFESCGIPVPRYAPISSPEDFGPAIETVPFP-AVLK 138


>gi|94985253|ref|YP_604617.1| lysine biosynthesis enzyme LysX [Deinococcus geothermalis DSM
           11300]
 gi|94555534|gb|ABF45448.1| Lysine biosynthesis enzyme LysX [Deinococcus geothermalis DSM
           11300]
          Length = 292

 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  +P  +  V      A + I+ L  P+ V+K  + + GR   R  +          
Sbjct: 98  LARAGLPTPRTGVAFDGETALALIEELGYPV-VLKPTVGSWGRMVSRIND---------- 146

Query: 72  VESSLKSVISDIREILG 88
                   + + +E+LG
Sbjct: 147 --RDAAEALIEHKEVLG 161


>gi|307243579|ref|ZP_07525725.1| pyruvate carboxylase [Peptostreptococcus stomatis DSM 17678]
 gi|306493046|gb|EFM65053.1| pyruvate carboxylase [Peptostreptococcus stomatis DSM 17678]
          Length = 1146

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 61/177 (34%), Gaps = 28/177 (15%)

Query: 14  KYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + NVP   GV   + +V  A+   + +  P+ V K+    GGRG    +           
Sbjct: 129 EANVPTIPGVEKALKTVKEAKQVAEKIGYPVMV-KASNGGGGRGMRIVRREED------- 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +E   ++  S+ R+  G  LI  +           Y+ED   I     + +L D+     
Sbjct: 181 LEIEFENARSESRKAFGEDLIFIEK----------YIEDPKHIE----VQVLGDKYGN-- 224

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQARIDG 187
             +   +    ++   +   +      +DP +     +D   +   +       ++ 
Sbjct: 225 -IVHLYERDCSVQRRHQKIIEFAPAFSLDPDVRERICQDAVRIAKHVGYTNAGTLEF 280


>gi|255717601|ref|XP_002555081.1| KLTH0G00946p [Lachancea thermotolerans]
 gi|238936465|emb|CAR24644.1| KLTH0G00946p [Lachancea thermotolerans]
          Length = 795

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A+     +   A++ ++ +   + V+K+   AGG+             
Sbjct: 114 SKDFMAKHNIPTARYANFDNYEEAKAYLQKVDYQI-VLKADGIAGGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + +S +     ++ +    ++ +Q G  G   + + +E+  +
Sbjct: 160 -GVLIPTSQQEAQEALKAL----MVERQFGSAG---DSIVIEEFLE 197


>gi|260795989|ref|XP_002592987.1| hypothetical protein BRAFLDRAFT_275721 [Branchiostoma floridae]
 gi|229278211|gb|EEN48998.1| hypothetical protein BRAFLDRAFT_275721 [Branchiostoma floridae]
          Length = 706

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V V  G   V+     A      +  P+ +  S                 
Sbjct: 157 ESKLLAKEAKVNVIPGFDGVVKDADEAVQIANDIGYPVMIKAS---------------AG 201

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + K          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 202 GGGKGMRIAWNDKETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEMQVLA 254

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D     +      +    I+   +   ++   + +DP       E   +L   +E     
Sbjct: 255 DSHGNALYL---NERECSIQRRNQKVVEEAPSIFLDPDTRRAMGEQAVALARAVEYTSAG 311

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 312 TVEFLVDSQKNFY--FLEMNTRLQVEHPITECITG 344


>gi|254424145|ref|ZP_05037863.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
           7335]
 gi|196191634|gb|EDX86598.1| carbamoyl-phosphate synthase, large subunit [Synechococcus sp. PCC
           7335]
          Length = 1070

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 54/172 (31%), Gaps = 36/172 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      V V    +  ++  +    + +     +++     GG G G       
Sbjct: 119 RKLFKEAMLKIGVGVCPSGLAETMDESWEINQQIGSYPLIIRPAFTMGGSGGG------- 171

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +   +  R           +G   S V+ + +E      +E  L ++ 
Sbjct: 172 -------IAYNKEEFETICR-----------SGLEASPVSQILIEQSLLGWKEYELEVMR 213

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           D  +  V  I S      IE +          + + P   +T ++   L D 
Sbjct: 214 D-LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 258


>gi|146304738|ref|YP_001192054.1| carbamoyl phosphate synthase large subunit [Metallosphaera sedula
           DSM 5348]
 gi|145702988|gb|ABP96130.1| carbamoyl-phosphate synthase large subunit [Metallosphaera sedula
           DSM 5348]
          Length = 1046

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 71/221 (32%), Gaps = 43/221 (19%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +PV       S   A    + +  P+ V +   + GGRG                V    
Sbjct: 138 IPVPPSFSAKSSEEALEKAEEIGYPVMV-RVSFNLGGRGS--------------TVAWDR 182

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
           +S+   I      + I +           V VE      +EL   ++ D        IA 
Sbjct: 183 ESLRKSIDRAFSQSYIGE-----------VLVEKYLHHWKELEYEVVRDSKGNSAV-IAC 230

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQARIDGGD 189
            +   +++ +     + I   +I P   + +++          + + + L G+  +    
Sbjct: 231 VE---NLDPMGVHTGESI---VITPCQTLDNKEFQEMRTLSMKVAESISLVGECNVQFA- 283

Query: 190 LFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           L PN Y  +  + +  +   + L     G       +K+S 
Sbjct: 284 LDPNSYTYYVIETNPRMSRSSALASKATGYPLAYVSAKLSL 324


>gi|75906560|ref|YP_320856.1| cyanophycin synthetase [Anabaena variabilis ATCC 29413]
 gi|75700285|gb|ABA19961.1| cyanophycin synthetase [Anabaena variabilis ATCC 29413]
          Length = 636

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA L     PV +G ++ S   A    K +  P+ V K  +  G +G G   ++    + 
Sbjct: 221 KAFLHTLGFPVPQGEIVYSQKEARQVAKDIGYPVAV-KPVV--GHKGIGVTADIKDVDEL 277

Query: 69  GVRVESSLKSVIS 81
            V  + +L+++  
Sbjct: 278 EVAYDRALEAIPE 290


>gi|27376098|ref|NP_767627.1| 3-methylcrotonyl-CoA carboxylase subunit alpha [Bradyrhizobium
           japonicum USDA 110]
 gi|27349237|dbj|BAC46252.1| 3-methylcrotonyl-CoA carboxylase alpha subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 658

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESA-IKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK ++RK  VP V     +        A  + +  P+ ++K+    GGRG     +  + 
Sbjct: 128 AKEIMRKAGVPCVPGYQGLEQGDEVMLAEARKIGFPV-MIKAVAGGGGRGMRLVTDAASF 186

Query: 66  SKGGVRVESSLKSVISDIREILGSTL 91
                   S  K+   D   IL   +
Sbjct: 187 PDALRSARSEAKAAFGDATVILERAI 212


>gi|262372162|ref|ZP_06065441.1| phosphoribosylamine-glycine ligase [Acinetobacter junii SH205]
 gi|262312187|gb|EEY93272.1| phosphoribosylamine-glycine ligase [Acinetobacter junii SH205]
          Length = 428

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVDAAKAYVEQNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +     I ++L       + G  G   + V +E   +     ++ ++
Sbjct: 154 -GVIVAMTNQEAFDAIDDMLA----GNKFGDAG---SRVVIEQFLEGEEASFICMI 201


>gi|226357624|ref|YP_002787364.1| sugar ABC transporter, periplasmic component [Deinococcus deserti
           VCD115]
 gi|226319615|gb|ACO47610.1| putative sugar ABC transporter, periplasmic component [Deinococcus
           deserti VCD115]
          Length = 422

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVV 45
           K L +K+ V V K     ++   E+A K L G   VV
Sbjct: 158 KDLFQKHGVAVPK-----TLKQLEAAAKALNGKDGVV 189


>gi|206971153|ref|ZP_03232104.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           AH1134]
 gi|206733925|gb|EDZ51096.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus
           AH1134]
          Length = 1072

 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 678 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 714


>gi|325067827|ref|ZP_08126500.1| phosphoribosylamine/glycine ligase [Actinomyces oris K20]
          Length = 435

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++     +A+     P YVVK    A G+G     E P    
Sbjct: 106 AKEIMTAAGVPTAEAAVCTTEAELTAALDRFGAP-YVVKEDGLAAGKGVVVTDERPVALA 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            G R   +  S    + + L     +      G+ V  +      D  R
Sbjct: 165 HG-RACLTRGSGRVVVEDYLDGPEASVFCVCDGATVRPL--APAQDFKR 210


>gi|302760415|ref|XP_002963630.1| hypothetical protein SELMODRAFT_79988 [Selaginella moellendorffii]
 gi|300168898|gb|EFJ35501.1| hypothetical protein SELMODRAFT_79988 [Selaginella moellendorffii]
          Length = 565

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 13/121 (10%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
            RKY VPV + V ++ + + E A   L  P +++K       R            +    
Sbjct: 110 FRKYGVPVPEFVEVTGLESLEDAASVLGYP-FMLKC------RRFAYDGRGNIAVRSKSD 162

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  S+K++    + +     ++ +          V V  G D     Y     D +   +
Sbjct: 163 LLPSVKALGGFEQGLFAEKWVSFEKELA------VMVARGIDGTTRCYQLNFSDLSRRSI 216

Query: 132 A 132
            
Sbjct: 217 C 217


>gi|229086451|ref|ZP_04218623.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-44]
 gi|228696768|gb|EEL49581.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-44]
          Length = 1016

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|227358562|ref|ZP_03842887.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis ATCC
           29906]
 gi|227161273|gb|EEI46347.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis ATCC
           29906]
          Length = 886

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q + ++  Y        +  +   A S  + +  P+ +         + +       ++
Sbjct: 484 HQVQPIMEAYGFNTLPTWIAHNAQEAVSIAEKIGYPVAL---------KLRSPDIPHKSE 534

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +        V S    I+       +  P  +++  + V+  A+    +EL +++ 
Sbjct: 535 VQGVMLYLRDSNEVESAAHAIIERV---SELYPQ-AKIQGLLVQSMANRAGSQELRVAIE 590

Query: 124 VDRTSGMVAFIASTQGGMDIE 144
            D   G +  +   +GG++ +
Sbjct: 591 QDPIFGPLILLG--EGGVEWQ 609


>gi|260589122|ref|ZP_05855035.1| phosphoribosylamine--glycine ligase [Blautia hansenii DSM 20583]
 gi|331082538|ref|ZP_08331663.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540542|gb|EEX21111.1| phosphoribosylamine--glycine ligase [Blautia hansenii DSM 20583]
 gi|330400516|gb|EGG80146.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 424

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 74/225 (32%), Gaps = 45/225 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A          A + ++       V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFEDADEALAYLREKAEFPIVLKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     +  I    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 153 -GVLICNTLEEAEEGVCTI----MLDKKFGSAG---NTLVIEEFMTGRE---VSVLSFVD 201

Query: 128 SGMVAFIASTQG---------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV---ASLCD 175
              +  + S Q          G++   +    P   +   +D             A   +
Sbjct: 202 GKTIKTMTSAQDHKRAKDGDEGLNTGGMGTFSPSPFYTKEVDEFCEKYVYQATVDAMAAE 261

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLR 220
             E +G        +F  L     +K   +LE N        ++ 
Sbjct: 262 GREFKGI-------IFFGL--MLTEKGPKVLEYNARFGDPEAQVV 297


>gi|197284298|ref|YP_002150170.1| acyl-CoA synthetase/acetyltransferase [Proteus mirabilis HI4320]
 gi|194681785|emb|CAR41007.1| putative acyl-CoA synthetase/acetyltransferase [Proteus mirabilis
           HI4320]
          Length = 886

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q + ++  Y        +  +   A S  + +  P+ +         + +       ++
Sbjct: 484 HQVQPIMEAYGFNTLPTWIAHNAQEAVSIAEKIGYPVAL---------KLRSPDIPHKSE 534

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +        V S    I+       +  P  +++  + V+  A+    +EL +++ 
Sbjct: 535 VQGVMLYLRDSNEVESAAHAIIERV---SELYPQ-AKIQGLLVQSMANRAGSQELRVAIE 590

Query: 124 VDRTSGMVAFIASTQGGMDIE 144
            D   G +  +   +GG++ +
Sbjct: 591 QDPIFGPLILLG--EGGVEWQ 609


>gi|167564151|ref|ZP_02357067.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           oklahomensis EO147]
 gi|167574654|ref|ZP_02367528.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           oklahomensis C6786]
          Length = 455

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 117/342 (34%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +           +++  P+ +  +                 
Sbjct: 119 AKQTMIRTGVPCVPGSDGALPDDPKEIVKIARSVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SHKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     +I+  +   
Sbjct: 263 ACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGVDIVQEQIRIAAGEKLS 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G I       G G+ + +      +  
Sbjct: 323 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRITSWHTPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++  +  +I  S+  V+GIL NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAISRMRIALSEMVVEGILTNI 418


>gi|47569514|ref|ZP_00240194.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus G9241]
 gi|47553843|gb|EAL12214.1| carbamoyl-phosphate synthase, large subunit [Bacillus cereus G9241]
          Length = 1072

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 678 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 714


>gi|71899959|ref|ZP_00682105.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Ann-1]
 gi|71730246|gb|EAO32331.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Ann-1]
          Length = 394

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 27/122 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L R   +PV   V + +  A + AI  +  P  ++K++   G  GKG+F+        
Sbjct: 103 KTLFRDLGIPVPDFVAVDNRAALDVAIVKVGTPC-ILKTR-RFGYDGKGQFR-------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++  +   +  +    +LG     +Q G TG     + +E      RE  +S+L  R  
Sbjct: 153 -IKTLTDADAAWA----MLG-----EQAGITG-----LILEAFVPFQRE--MSILAVRGC 195

Query: 129 GM 130
             
Sbjct: 196 NG 197


>gi|330468393|ref|YP_004406136.1| cysteine synthase [Verrucosispora maris AB-18-032]
 gi|328811364|gb|AEB45536.1| cysteine synthase [Verrucosispora maris AB-18-032]
          Length = 756

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 66/214 (30%), Gaps = 44/214 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  +P  +  V+ + H   +A+     P  V               K     +  
Sbjct: 447 RDLLSRAGLPQPRYSVVRAPHEVAAAVARAGLPCVV---------------KPTSDSAST 491

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED---GADILRELYLSLLVD 125
           GVR+  +     + +  +L  T+  +           V VE    GA++  E + +    
Sbjct: 492 GVRLCRTEAEAQAQVATLLAVTVNVRGQATY----AAVLVEQYLAGAEVSVETFAA---- 543

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G V  +  T   +  E    +    IF     P      +   S    + L   A  
Sbjct: 544 --DGRVEIVGITDKTIGPEPYFVET-GHIFPAPHRPESEAIRQTARSALAAVGLAHGAA- 599

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRL 219
                           +M L E  P+++  N RL
Sbjct: 600 --------------HVEMRLTEAGPVVVEINARL 619


>gi|315604176|ref|ZP_07879242.1| carbamoyl-phosphate synthase, large subunit [Actinomyces sp. oral
           taxon 180 str. F0310]
 gi|315313882|gb|EFU61933.1| carbamoyl-phosphate synthase, large subunit [Actinomyces sp. oral
           taxon 180 str. F0310]
          Length = 1099

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA++ +    VA+  +  ++    +A   L  PL V         R       L +    
Sbjct: 133 KAIVERSGAEVARSFIAHTLEECHAAAAELGYPLVV---------RPSFTMGGLGSG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 + + +     + L  ++ T+           V +E+     +E  L L+ D+  
Sbjct: 181 ---FAYTPEDLDRIAGQGLADSITTE-----------VLLEESILGWKEYELELMRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +V           IE V          + + P + +T  ++  L D+
Sbjct: 227 NVVVV-------CSIENVDPVGVHTGDSITVAPALTLTDREMQRLRDI 267


>gi|254479394|ref|ZP_05092727.1| cyanophycin synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214034663|gb|EEB75404.1| cyanophycin synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 857

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           K +L+ + +PV +G V  +   A S  + L  P+ V+K   + G +GKG
Sbjct: 195 KKILKDHGLPVPEGDVAYNEEEAISIAEELGYPV-VIKP--YNGNQGKG 240


>gi|299116161|emb|CBN76068.1| carboxylase [Ectocarpus siliculosus]
          Length = 745

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA--ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA++    VPV  G        A  E   K +  P+ ++K+ +  GG+G  R  + P  
Sbjct: 150 AKAIMSDAGVPVCPGYHGEDQSDAFLEEEAKRVGFPV-MIKAVMGGGGKGM-RLVQTPEG 207

Query: 66  SKGGVRVESSLKSVISDIREIL 87
            +  +       +       +L
Sbjct: 208 FQSALEACRREAAAGFADDRML 229


>gi|312195548|ref|YP_004015609.1| carbamoyl-phosphate synthase, large subunit [Frankia sp. EuI1c]
 gi|311226884|gb|ADP79739.1| carbamoyl-phosphate synthase, large subunit [Frankia sp. EuI1c]
          Length = 1107

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P     V +S   A +  + +  P+ V  S +  GGRG
Sbjct: 677 DVLAAAGLPSPPHGVATSYPQAHAIAERIGYPVLVRPSYVL-GGRG 721



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 33/169 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++       A+  +  +V    +A +    P+ V  S    G                
Sbjct: 133 KEIVATVGGETARSAICVTVEECLAAGEEFSYPVVVRPSYTLGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G         +     + L ++  T            V VE+     +E  L L+ DR  
Sbjct: 178 GSGFAHDPDELARMASDGLAASPST-----------QVLVEESVLGWKEFELELMRDRAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
            +V           IE V          + + P + +T  +   L D+ 
Sbjct: 227 NVVVV-------CSIENVDPMGVHTGDSITVAPALTLTDREYQKLRDLA 268


>gi|237650539|ref|ZP_04524791.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CCRI 1974]
 gi|237822616|ref|ZP_04598461.1| carbamoylphosphate synthase large subunit [Streptococcus pneumoniae
           CCRI 1974M2]
          Length = 388

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K   +K  VPV  G VI +    + A+K +  P+
Sbjct: 117 KKFFKKAGVPVVPGAVIKTEADVDQAVKEIGLPM 150


>gi|126325455|ref|XP_001376993.1| PREDICTED: similar to phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase [Monodelphis
           domestica]
          Length = 1040

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 21/103 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P AK    ++   A + + +   P  V+K+   A G+             
Sbjct: 139 AKEFMDRHEIPTAKWKAFTTPEEACNFVMSADFPALVIKASGLAAGK------------- 185

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V S+ +     I+EI    +  K  G  G   + V +E+
Sbjct: 186 -GVIVASNKEEACKAIQEI----MQDKAFGAAG---DTVVIEE 220


>gi|28199896|ref|NP_780210.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Xylella
           fastidiosa Temecula1]
 gi|182682646|ref|YP_001830806.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Xylella
           fastidiosa M23]
 gi|28058017|gb|AAO29859.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa Temecula1]
 gi|182632756|gb|ACB93532.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa M23]
 gi|307578926|gb|ADN62895.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 394

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 27/122 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L R   +PV   V + +  A + AI  +  P  ++K++   G  GKG+F+        
Sbjct: 103 KTLFRDLGIPVPDFVAVDNRAALDVAIVKVGTPC-ILKTR-RFGYDGKGQFR-------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++  +   +  +    +LG     +Q G TG     + +E      RE  +S+L  R  
Sbjct: 153 -IKTLTDADAAWA----MLG-----EQAGITG-----LILEAFVPFQRE--MSILAVRGC 195

Query: 129 GM 130
             
Sbjct: 196 NG 197


>gi|17228434|ref|NP_484982.1| acetyl-CoA carboxylase biotin carboxylase subunit [Nostoc sp. PCC
           7120]
 gi|728782|sp|Q06862|ACCC_ANASP RecName: Full=Biotin carboxylase; AltName: Full=Acetyl-CoA
           carboxylase subunit A; Short=ACC
 gi|289133|gb|AAB51770.1| biotin carboxylase [Anabaena sp.]
 gi|17130285|dbj|BAB72896.1| biotin carboxylase [Nostoc sp. PCC 7120]
          Length = 447

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++ +        K +  P+ ++K+    GGR           
Sbjct: 120 AKETMQKAGVPTVPGSEGLVETEQEGLELAKDIGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S    +       G        G  G     VY+E   +  R +   +L D
Sbjct: 168 ---GMRLVRSPDEFVKLFLAAQGE--AGAAFGNAG-----VYIEKFIERPRHIEFQILAD 217

Query: 126 RTSGMV 131
               ++
Sbjct: 218 NYGNVI 223


>gi|116053003|ref|YP_793321.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115588224|gb|ABJ14239.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 429

 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHRIPTAAYRNFTEVEPALAYLREQGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMNLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVAFIASTQG 139
            +   +AS+Q 
Sbjct: 205 VLP--MASSQD 213


>gi|332982192|ref|YP_004463633.1| phosphoribosylamine--glycine ligase [Mahella australiensis 50-1
           BON]
 gi|332699870|gb|AEE96811.1| phosphoribosylamine--glycine ligase [Mahella australiensis 50-1
           BON]
          Length = 416

 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 35/137 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ KYN+P AK  V      A + ++  P P+ V+K+   A G+             
Sbjct: 104 AKQLMHKYNIPTAKYEVFDDYEKAAAYVEKCPVPI-VIKADGLALGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL-----SL 122
            GV V    +  ++ ++ I+               ++ V+ E G+ ++ E YL     S+
Sbjct: 150 -GVTVAMDRQDALAALKSIM---------------LDKVFKEAGSRVVIEQYLTGHEVSV 193

Query: 123 LVDRTSGMVAFIASTQG 139
           L       V  + S Q 
Sbjct: 194 LAFSDGKTVVPMISAQD 210


>gi|229031518|ref|ZP_04187518.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH1271]
 gi|228729807|gb|EEL80787.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH1271]
          Length = 1018

 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|229174552|ref|ZP_04302083.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus MM3]
 gi|228608921|gb|EEK66212.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus MM3]
          Length = 1018

 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|229180162|ref|ZP_04307506.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus 172560W]
 gi|228603371|gb|EEK60848.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus 172560W]
          Length = 1018

 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|311105295|ref|YP_003978148.1| phosphoribosylamine--glycine ligase [Achromobacter xylosoxidans A8]
 gi|310759984|gb|ADP15433.1| phosphoribosylamine--glycine ligase [Achromobacter xylosoxidans A8]
          Length = 435

 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++N+P A+    +    A + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMVRHNIPTARYETFTDPALAHAYIDQEGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADI 114
            GV V ++L+   + +  +LG        G  G+RV    C+  E+ + I
Sbjct: 152 -GVVVAATLEEAHAAVDAMLG----DGSMGAAGARVVIEECLVGEEASFI 196


>gi|296876496|ref|ZP_06900547.1| carbamoylphosphate synthase large subunit [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432489|gb|EFH18285.1| carbamoylphosphate synthase large subunit [Streptococcus
           parasanguinis ATCC 15912]
          Length = 388

 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 15/82 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K  VPV  G VI      + A+K +  P  + K     G      FK        
Sbjct: 117 KKLFKKAGVPVVPGAVIKKEKDIDKAVKKIGLP-LIAKPDNGVG--AAATFK-------- 165

Query: 69  GVRVESSLKSVISDIREILGST 90
                 + + V     E  G T
Sbjct: 166 ----IETPEDVDHFKAEWDGHT 183


>gi|205372446|ref|ZP_03225259.1| phosphoribosylamine--glycine ligase [Bacillus coahuilensis m4-4]
          Length = 432

 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 35/177 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++YN+P A     +S+  A+  I +  GP YV+K+   A G+             
Sbjct: 106 AKDLMKQYNIPTAAYETFTSIQDAKEYIASTKGP-YVIKANGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +    +     +  +L       + G  G     + +E   +   E  L   V+ T
Sbjct: 152 -GVVIADGEQEACQAVESML----SGSKFGEAG---REIVIEAFLE-GEEFSLMAFVNGT 202

Query: 128 SGMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS 172
           + +   IA               GGM         P+ +    ++ ++   +E +  
Sbjct: 203 TVIPLEIAQDHKRVGEGDTGLNTGGMGAYSPVPQIPKSVVTQAVETIMKPVAEAMVK 259


>gi|86605556|ref|YP_474319.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. JA-3-3Ab]
 gi|86554098|gb|ABC99056.1| acetyl-CoA carboxylase, biotin carboxylase [Synechococcus sp.
           JA-3-3Ab]
          Length = 451

 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   +I+S   A    + +  P+ ++K+    GGRG      +  D
Sbjct: 121 ARETMQAVGVPTVPGSRGLITSDEEAVRLAEKIGYPV-IIKATAGGGGRGM----RVARD 175

Query: 66  SKGGVRVESSLKSVISDI 83
           ++  +++  + +      
Sbjct: 176 AQELLKMMRTAQGEAQAA 193


>gi|320325541|gb|EFW81603.1| hypothetical protein PsgB076_05920 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 1302

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 34/212 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTEMLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQARI 185
              ++A       G+    V +   + + +    P   +       L    ++L      
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEET---PAPNLPDGMADELCAAAIKLARAVNY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                   ++ +  D+    LE+N  + +++G
Sbjct: 268 RSAGTLEFVFDS-EDQRFYFLEVNTRLQVEHG 298


>gi|326772419|ref|ZP_08231703.1| phosphoribosylamine--glycine ligase [Actinomyces viscosus C505]
 gi|326637051|gb|EGE37953.1| phosphoribosylamine--glycine ligase [Actinomyces viscosus C505]
          Length = 435

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++     +A+     P YVVK    A G+G     E P    
Sbjct: 106 AKEIMTAAGVPTAEAAVCTTEAELSAALDRFGAP-YVVKEDGLAAGKGVVVTDERPVALA 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            G     +  S    + + L     +      G+ V  +      D  R
Sbjct: 165 HG-HACLTRGSGRVVVEDYLDGPEASVFCVCDGATVRPL--APAQDFKR 210


>gi|296170749|ref|ZP_06852321.1| carbamoyl-phosphate synthase, large subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894564|gb|EFG74301.1| carbamoyl-phosphate synthase, large subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 1119

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K  + ++   A      +  P+ V  S +  GGRG
Sbjct: 696 DVLAGAGLPAPKYGMATTFAQARRIADEIGYPVLVRPSYVL-GGRG 740



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      ++ L  P+ V         R       L +    
Sbjct: 140 KDIVAKVGGESARSRVCFTMDEVRETVEELGLPVVV---------RPSFTMGGLGSG--- 187

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S++ V      + G+ L    +         V +E+     +E  L L+ D   
Sbjct: 188 ---MARSVEEV----DRMAGAGLAESPSAN-------VLIEESIYGWKEFELELMRDGHD 233

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE            + + P + +T  +   + D
Sbjct: 234 NVVVV-------CSIENFDPMGVHTGDSVTVAPAMTLTDREYQRMRD 273


>gi|238917647|ref|YP_002931164.1| biotin carboxylase [Eubacterium eligens ATCC 27750]
 gi|238873007|gb|ACR72717.1| biotin carboxylase [Eubacterium eligens ATCC 27750]
          Length = 428

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+ +  VPV  G   ++++   A    + +  P+ +  S    G   +  F      
Sbjct: 96  ARQLMIECGVPVVPGSDGLVATAEEAAHIAEKIGYPVLIKASAGGGGKGMRKAFSR---- 151

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
                     +++     +    +             +N  ++E
Sbjct: 152 --------EDIENAFETAKSEAKAAFGNDDMYIEKLIINPRHIE 187


>gi|229019089|ref|ZP_04175924.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH1273]
 gi|229025333|ref|ZP_04181751.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH1272]
 gi|228735918|gb|EEL86495.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH1272]
 gi|228742189|gb|EEL92354.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus AH1273]
          Length = 1018

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|206602461|gb|EDZ38942.1| Phosphoribosylglycinamide synthetase [Leptospirillum sp. Group II
           '5-way CG']
          Length = 425

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 15/89 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +R+  +P A   V     +   A+++   P  V+K+   A G+             
Sbjct: 111 AKERMREAGIPTADFFVTRDPGSVRDAVRSFGYP-SVLKADGLAQGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQT 96
            GV V  + + +   + ++     +  QT
Sbjct: 157 -GVFVLQTPEDLEEALGKVFHRRSLGDQT 184


>gi|188996191|ref|YP_001930442.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931258|gb|ACD65888.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 558

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 31/134 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      + + K  V+ S+  AE  I  +  P+ +                    
Sbjct: 129 RDLFKKAMENIGLSMPKSAVVKSIAEAEEVIDWIGFPVII--------------RPSFTL 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG  +  +       ++  L ++            ++ V +E+     +E  + ++ 
Sbjct: 175 GGTGG-SIAYNRDEFYPKVKAGLDAS-----------PIHEVLLEESVIGWKEFEMEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           D+       I S +
Sbjct: 223 DKNDNC-VIICSIE 235


>gi|116073624|ref|ZP_01470886.1| phosphoribosylamine--glycine ligase [Synechococcus sp. RS9916]
 gi|116068929|gb|EAU74681.1| phosphoribosylamine--glycine ligase [Synechococcus sp. RS9916]
          Length = 443

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 20/96 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++  ++P A    ISS     + ++ +  P  VVK+   A G+             
Sbjct: 127 AKQLMQDASIPTAGHWSISSAEEGLAVLEQIQRP-LVVKADGLAAGK------------- 172

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V +S++   + IRE  G        G  G RV
Sbjct: 173 -GVTVATSVEESANAIREAFGGRF-----GSAGERV 202


>gi|62182626|ref|YP_219043.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62130259|gb|AAX67962.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
          Length = 416

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDVLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|325003097|ref|ZP_08124209.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Pseudonocardia sp. P1]
          Length = 1876

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 11/108 (10%)

Query: 8   AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L     VP+A   G  ++ + AA  A +T+  P  +VK+    GGRG          
Sbjct: 131 SKQLAESVGVPMAPWSGGPVADLDAARKAAETVGYP-LMVKATAGGGGRGIRFV------ 183

Query: 66  SKGGVRVESSLKSVISDIREILG-STLITKQTGPTGSRVNCVYVEDGA 112
             G   ++ + +   S+     G +T+  ++    G  V    V D  
Sbjct: 184 -AGPEHLDEAFERAASEASRTAGDATVFLERAVAGGRHVEVQVVADAT 230


>gi|320333954|ref|YP_004170665.1| lysine biosynthesis enzyme LysX [Deinococcus maricopensis DSM
           21211]
 gi|319755243|gb|ADV67000.1| lysine biosynthesis enzyme LysX [Deinococcus maricopensis DSM
           21211]
          Length = 282

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  +P  +  V     AA   I+ +  P+ V+K  + + GR   +  +          
Sbjct: 94  LARAGLPTPRTGVAFDGEAALQLIEEMGYPV-VLKPTVGSWGRMVSKIND---------- 142

Query: 72  VESSLKSVISDIREILG 88
                   I + +E+LG
Sbjct: 143 --RDAAEAIIEHKEVLG 157


>gi|304404040|ref|ZP_07385702.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus
           curdlanolyticus YK9]
 gi|304347018|gb|EFM12850.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus
           curdlanolyticus YK9]
          Length = 1070

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 31/89 (34%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+R+   PV + V++++V  A      +  P+ V  +    G  G     E       
Sbjct: 133 RELMRELEQPVPESVIVTTVEEAVDFANEIGYPIIVRPAYTLGGTGGGICANEEELLETV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTG 97
              +  S  +     + I G   +  +  
Sbjct: 193 ASGIRYSPINQCLIEKSIAGMKEVEYEVM 221



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           A+LRK N+   +G  +++V  A +  + L  P+ V  S +  G
Sbjct: 680 AMLRKLNIAQPEGSTVTNVDEAVAVAQGLGYPVLVRPSYVLGG 722


>gi|229192056|ref|ZP_04319025.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus ATCC
           10876]
 gi|228591382|gb|EEK49232.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus ATCC
           10876]
          Length = 1018

 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P   G   ++V  A +    +  P+ V  S +  G
Sbjct: 624 GIPQPVGKTATTVEQAVAIADKIGYPVLVRPSYVLGG 660


>gi|297560567|ref|YP_003679541.1| carbamoyl-phosphate synthase L chain ATP-binding protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296845015|gb|ADH67035.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 1827

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 8   AKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK +  +  VPV   ++G V  ++  A  A + +  P  ++K+    GGRG         
Sbjct: 124 AKLIAEEVGVPVAPWSRGEVA-TLEEALRAGEEIGYP-LMLKATAGGGGRGIRMVAS--- 178

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG-SRVNCVYVEDG 111
               G  +  + +    +     GS ++  +   TG   V    + DG
Sbjct: 179 ----GEDLAEAYERTSQEALRAFGSGVVFLERLVTGARHVEVQIIADG 222


>gi|237756464|ref|ZP_04585000.1| carbamoyl-phosphate synthase large chain, N- section
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691378|gb|EEP60450.1| carbamoyl-phosphate synthase large chain, N- section
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 558

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 31/134 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K      + + K  V+ S+  AE  I  +  P+ +                    
Sbjct: 129 RDLFKKAMENIGLSMPKSAVVKSIAEAEEVIDWIGFPVII--------------RPSFTL 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG  +  +       ++  L ++            ++ V +E+     +E  + ++ 
Sbjct: 175 GGTGG-SIAYNRDEFYPKVKAGLDAS-----------PIHEVLLEESVIGWKEFEMEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           D+       I S +
Sbjct: 223 DKNDNC-VIICSIE 235


>gi|256832553|ref|YP_003161280.1| carbamoyl-phosphate synthase, large subunit [Jonesia denitrificans
           DSM 20603]
 gi|256686084|gb|ACV08977.1| carbamoyl-phosphate synthase, large subunit [Jonesia denitrificans
           DSM 20603]
          Length = 1109

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 42/228 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L + N+P       +++  A+   + +  P+ V  S +  G                G
Sbjct: 685 RVLTEANLPAPAYGTATTLGQAQEIAERIGYPVLVRPSYVLGG---------------RG 729

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +  S   +   ++  LG      +   +G  +  + ++   D   E+ + +L D    
Sbjct: 730 MEIVYSHGQLADYVQRALG------EAALSGGPLAPILIDRFLDDAMEIDVDVLFDGVDM 783

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQ 180
            V       GG+   IEE           L   P + ++  ++        +L   + + 
Sbjct: 784 YV-------GGIMEHIEEAGIHSGDSACVL---PPVSLSDAEIDRIVASTRALAQGIGVH 833

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
           G   +        LY    + +       P +    G      + +  
Sbjct: 834 GLMNVQFALASGVLY--VLEANPRASRTVPFVAKATGVPLAKAAALVM 879


>gi|149378451|ref|ZP_01896142.1| Acetyl/propionyl-CoA carboxylase, alpha subunit [Marinobacter
           algicola DG893]
 gi|149357263|gb|EDM45794.1| Acetyl/propionyl-CoA carboxylase, alpha subunit [Marinobacter
           algicola DG893]
          Length = 667

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 31/215 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSV--HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++  VPV  G    +       +A + +  P  ++K+    GGRG    +E    
Sbjct: 122 SKIAMQEAGVPVVPGFEGDNASDEELINAAENIGYP-LMIKASAGGGGRGMRLVEE---- 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  +L+   S+ ++  G                 + +E      R + + +  D
Sbjct: 177 ---ADELADNLQRARSEAKQAFGDD--------------ELILEKAVIEPRHIEIQVFAD 219

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
           +    V      +    ++   +   ++     + P L     E           +G   
Sbjct: 220 QHGNAVYL---GERDCSVQRRHQKVVEEAPSPFVTPELREAMGEAAVKAALACGYEGAGT 276

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
           ++   D   N Y  F + +  L   +P+  +  G+
Sbjct: 277 VEFLVDKDRNFY--FLEMNTRLQVEHPVTELITGQ 309


>gi|145590554|ref|YP_001152556.1| lysine biosynthesis enzyme LysX [Pyrobaculum arsenaticum DSM 13514]
 gi|145282322|gb|ABP49904.1| L-2-aminoadipate N-acetyltransferase [Pyrobaculum arsenaticum DSM
           13514]
          Length = 302

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 32/167 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+  VP  +  ++ S  AA +  + L  P+ +VK    + GR               V 
Sbjct: 117 LREVGVPTPETYLVFSREAARAVAEKLAYPV-IVKPTDGSWGR--------------LVN 161

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  S + + + +   L               V     + G DI     ++++ DR    +
Sbjct: 162 LVKSEEDLSTLLAHRLAMDSQMHLF-----LVQQYINKPGRDIR----VTVVGDRAVAAI 212

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             I  +QG            + +    IDP +    E        + 
Sbjct: 213 YRI--SQGDWRTNTARGGRAEPVK---IDPEL---EEIAVKASKAVG 251


>gi|167648404|ref|YP_001686067.1| urea carboxylase [Caulobacter sp. K31]
 gi|167350834|gb|ABZ73569.1| urea carboxylase [Caulobacter sp. K31]
          Length = 1238

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 76/212 (35%), Gaps = 34/212 (16%)

Query: 8   AKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L + + VP+A G  ++    AA  A + +  P+ ++K+    GG             
Sbjct: 124 ARDLAQAHGVPLAPGTDLLVDPAAALEAAQRIGFPV-ILKATAGGGGI------------ 170

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  + ++V      +    L        G     V++E      R + + +  D 
Sbjct: 171 --GMRVCETAEAVSEAFAAV--QRLANGHFSDGG-----VFLERYVRKARHVEVQMFGDG 221

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  +A  +    ++   +   ++       P  G+ +   A+L D    L   A  
Sbjct: 222 AGK---VVALGERDCSLQRRNQKVVEET------PAPGLPAATRAALLDAAVRLASAAHY 272

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                   LY A    D   LE+N  + +++G
Sbjct: 273 RSAGTVEFLYDA-ERDDFFFLEVNTRLQVEHG 303


>gi|294789117|ref|ZP_06754356.1| phosphoribosylamine--glycine ligase [Simonsiella muelleri ATCC
           29453]
 gi|294482858|gb|EFG30546.1| phosphoribosylamine--glycine ligase [Simonsiella muelleri ATCC
           29453]
          Length = 423

 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 22/110 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + K+ +P A+     +   A   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMHKHGIPTAQYQTFDNADLAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADI 114
            GV V  +L    + I ++L    +  + G  GSRV   + +  E+ + I
Sbjct: 152 -GVIVAMTLDEAHTAIDDML----LGNKMGNAGSRVVIEDYLLGEEASFI 196


>gi|255993967|ref|ZP_05427102.1| phosphoribosylamine--glycine ligase [Eubacterium saphenum ATCC
           49989]
 gi|255993635|gb|EEU03724.1| phosphoribosylamine--glycine ligase [Eubacterium saphenum ATCC
           49989]
          Length = 445

 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++KY +  A     +S   A   +K+      V+K+   A G+G            
Sbjct: 106 SKAFMKKYGISTANYEEFTSYEEALDYVKSQNTYPTVIKADGPALGKG------------ 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
               V  +   V +D    L S +  K  G +G     V +E+  +   E+ +    D  
Sbjct: 154 ----VIIAKDEVEADAA--LRSMMKEKAFGASG---EKVVIEEFLE-GPEITVLAFCDGE 203

Query: 128 SGMVAF 133
           +     
Sbjct: 204 NIRPML 209


>gi|50308629|ref|XP_454317.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643452|emb|CAG99404.1| KLLA0E08119p [Kluyveromyces lactis]
          Length = 1829

 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +  +  VP V    +I     A+   K L  P+ V KS    GG G  +      
Sbjct: 739 HSAREIAERAKVPLVPGSGLIKDAKEAKEVAKKLEYPVMV-KSTAGGGGIGLQK------ 791

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  ++ V   ++    S       G  G     V++E   +  R + + ++ 
Sbjct: 792 -----VDSEDDIERVFETVQHQGKSYF-----GDAG-----VFMERFVNNARHVEIQMMG 836

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   + +  + L      +
Sbjct: 837 DGFGKAIAI------GERDCSLQRRNQKVIEETPAPNLPEATRAKMRAASERLG--SLLK 888

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y    D +   LE+N 
Sbjct: 889 YKCAGTVEFIYDEQRD-EFYFLEVNA 913


>gi|83746482|ref|ZP_00943533.1| Phosphoribosylamine--glycine ligase [Ralstonia solanacearum UW551]
 gi|207743793|ref|YP_002260185.1| phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Ralstonia solanacearum IPO1609]
 gi|83726813|gb|EAP73940.1| Phosphoribosylamine--glycine ligase [Ralstonia solanacearum UW551]
 gi|206595193|emb|CAQ62120.1| phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Ralstonia solanacearum IPO1609]
          Length = 422

 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P AK     +   A + +    G   V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTAKYQTFGNAAEAHAYVDR-GGAPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+         +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMSLEEAHGA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +A++Q 
Sbjct: 203 D--VVAMATSQD 212


>gi|121998849|ref|YP_001003636.1| phosphoribosylaminoimidazole carboxylase, ATPase [Halorhodospira
           halophila SL1]
 gi|121590254|gb|ABM62834.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Halorhodospira
           halophila SL1]
          Length = 384

 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E   K  LR++ +PV     +     A +A+  +  P  V+KS    G  GKG+ +  
Sbjct: 110 ILE---KTFLREHGLPVVPFEAVHGPEEAAAAVARIGAP-AVIKS-AGLGYDGKGQARVE 164

Query: 63  PADSKGGVRVESSLKSVISDI 83
            AD              + + 
Sbjct: 165 SADEVSAAWSAVGADEAVVEA 185


>gi|331010019|gb|EGH90075.1| urea amidolyase-like protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 761

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   +         
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPDGMADELCAAAIKLARAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|329894593|ref|ZP_08270399.1| Phosphoribosylamine--glycine ligase [gamma proteobacterium
           IMCC3088]
 gi|328922947|gb|EGG30275.1| Phosphoribosylamine--glycine ligase [gamma proteobacterium
           IMCC3088]
          Length = 423

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA L ++N+P A     + V  A   I     P+ VVK+   A G+              
Sbjct: 109 KAFLARHNIPTASYQTFTEVEPAVGYITAQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV---NCVYVEDGADILRELYLSLLVD 125
           GV V ++ +  I  + ++L         G  G RV    C+  E+ + I       ++ D
Sbjct: 154 GVIVATTEQEAIDAVTDML----SGNAFGDAGCRVVIEECLLGEEASFI-------VVCD 202

Query: 126 RTSGMVAFIASTQG 139
             + +   +AS+Q 
Sbjct: 203 GKNAVP--MASSQD 214


>gi|320107251|ref|YP_004182841.1| acetyl-CoA carboxylase, biotin carboxylase [Terriglobus saanensis
           SP1PR4]
 gi|319925772|gb|ADV82847.1| acetyl-CoA carboxylase, biotin carboxylase [Terriglobus saanensis
           SP1PR4]
          Length = 457

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+  ++K  VP+  G   VI+    A    K++  P+ ++K+    GGRG
Sbjct: 119 ARQTMKKAKVPILPGSDGVIAGADEALEWAKSVGYPV-ILKAVAGGGGRG 167


>gi|207723017|ref|YP_002253437.1| phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Ralstonia solanacearum MolK2]
 gi|206588206|emb|CAQ18772.1| phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Ralstonia solanacearum MolK2]
          Length = 422

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P AK     +   A + +     P+ V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTAKYQTFGNAAEAHAYVDREGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+         +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMSLEEAHGA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +A++Q 
Sbjct: 203 D--VVAMATSQD 212


>gi|302876229|ref|YP_003844862.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Clostridium cellulovorans 743B]
 gi|307686961|ref|ZP_07629407.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Clostridium cellulovorans 743B]
 gi|302579086|gb|ADL53098.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Clostridium cellulovorans 743B]
          Length = 391

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 68/208 (32%), Gaps = 48/208 (23%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y  K++L++  + V    +++S+    +    L   + ++K+    G  GKG        
Sbjct: 113 YVQKSILKEAGIKVPAFYLVNSLEELRNIFYNLGEKI-ILKT-CKGGYDGKGNIV----- 165

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               V+    L+    +  +                    + VE+  +  +E  +S++V 
Sbjct: 166 ----VKNIKKLEDAYKEFSD------------------KELMVEEFINYTKE--VSIIVA 201

Query: 126 RTSGMVAFIASTQGG-MDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +    + F    +    D   +    P KI K         T E +  +           
Sbjct: 202 KNHEDITFYPIAENNHKDSILINSIIPAKISKD--------TEEKIIEVAKK------VV 247

Query: 185 IDGGDLFPNLYKAFCDKDMSLL--EINP 210
               D      + F D D+ +L  EI P
Sbjct: 248 ETLDDFGVFCIEFFIDTDLDVLVNEIAP 275


>gi|212695461|ref|ZP_03303589.1| hypothetical protein BACDOR_05015 [Bacteroides dorei DSM 17855]
 gi|212661986|gb|EEB22560.1| hypothetical protein BACDOR_05015 [Bacteroides dorei DSM 17855]
          Length = 429

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 36/197 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 53  GVPVVPGTEQPLQSAEEAVRICNAIGYPV-MLKASMGGGGK--------------GMRLI 97

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 98  HSEDEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNHGNVI-- 148

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 149 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRQEMGEKAVAAARAVNYSGAGTIE 201

Query: 193 NLYKAFCDKDMSLLEIN 209
            L     ++D   LE+N
Sbjct: 202 FLVD--KNRDFYFLEMN 216


>gi|89889774|ref|ZP_01201285.1| phosphoribosylamine--glycine ligase [Flavobacteria bacterium BBFL7]
 gi|89518047|gb|EAS20703.1| phosphoribosylamine--glycine ligase [Flavobacteria bacterium BBFL7]
          Length = 423

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 25/127 (19%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + +  VP A  K    +S+    + I +L  P +V+K+   AGG+           
Sbjct: 110 AKEFMERNEVPTAAYKSFTATSLKEGMAFIDSLK-PPFVLKADGLAGGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV + S  +     + E+L         G  G+  N V +E+  D   E+ + +L D
Sbjct: 158 ---GVLIISDAQEAKESLEEML-------VGGKFGAASNKVVIEEFLD-GIEMSVFVLTD 206

Query: 126 RTSGMVA 132
             S  + 
Sbjct: 207 GDSYKIL 213


>gi|300703523|ref|YP_003745125.1| phosphoribosylglycinamide synthetase (gar synthetase) [Ralstonia
           solanacearum CFBP2957]
 gi|299071186|emb|CBJ42502.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Ralstonia
           solanacearum CFBP2957]
          Length = 422

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P AK     +   A + +     P+ V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTAKYQTFGNAAEAHAYVDREGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+         +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMSLEEAHGA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +A++Q 
Sbjct: 203 D--VVAMATSQD 212


>gi|237708300|ref|ZP_04538781.1| pyruvate carboxylase subunit A [Bacteroides sp. 9_1_42FAA]
 gi|265757066|ref|ZP_06090928.1| pyruvate carboxylase subunit A [Bacteroides sp. 3_1_33FAA]
 gi|229457521|gb|EEO63242.1| pyruvate carboxylase subunit A [Bacteroides sp. 9_1_42FAA]
 gi|263233565|gb|EEZ19194.1| pyruvate carboxylase subunit A [Bacteroides sp. 3_1_33FAA]
          Length = 419

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 36/197 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 43  GVPVVPGTEQPLQSAEEAVRICNAIGYPV-MLKASMGGGGK--------------GMRLI 87

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 88  HSEDEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNHGNVI-- 138

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 139 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRQEMGEKAVAAARAVNYSGAGTIE 191

Query: 193 NLYKAFCDKDMSLLEIN 209
            L     ++D   LE+N
Sbjct: 192 FLVD--KNRDFYFLEMN 206


>gi|167837953|ref|ZP_02464812.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           thailandensis MSMB43]
          Length = 455

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 115/342 (33%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +           +++  P+ +  +                 
Sbjct: 119 AKQTMIRTGVPCVPGSDGALPDDPKEIVKIARSIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SHKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     +I+  +   
Sbjct: 263 ACKKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVTELITGVDIVQEQIRIAAGEKLS 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
            R  DIQ  R  + E     E       +    G I       G G+ + +      +  
Sbjct: 323 VRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRITSWHTPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++     +I  S+  V+GIL NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAINRMRIALSEMVVEGILTNI 418


>gi|15606634|ref|NP_214014.1| biotin carboxylase [Aquifex aeolicus VF5]
 gi|2983860|gb|AAC07413.1| biotin carboxylase [Aquifex aeolicus VF5]
          Length = 477

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK ++++  +P   G    + ++  A+ A+K +  P+ ++K+    GGRG    +     
Sbjct: 118 AKKVMKEVGLPTIPGTEEPVRTLEDAKHAVKEIGFPV-MLKAAYGGGGRGMRVIRNEE-- 174

Query: 66  SKGGVRVESSLKSVISDIREILGS 89
                 +E + +S   +     G 
Sbjct: 175 -----ELEKNFESAFREAETFFGK 193


>gi|253826206|gb|ACT36390.1| carbamoyl phosphate synthase large subunit [uncultured bacterium
           L11E10]
          Length = 1080

 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  S   A     T+  P  +         R          
Sbjct: 129 RELFRVAMAEIGLECPKAAVARSFEQAVEIQATVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +     I+            G   S V+ V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREEFEDIIKR-----------GLELSPVHEVLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I  +     IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCS-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|262195317|ref|YP_003266526.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Haliangium ochraceum DSM 14365]
 gi|262078664|gb|ACY14633.1| Carbamoyl-phosphate synthase L chain ATP- binding protein
           [Haliangium ochraceum DSM 14365]
          Length = 452

 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +R   + V  G   V+  V  A    + +  P+ + K++   GGR           
Sbjct: 122 AKRAMRAAGLAVIPGSEGVLGDVDEAREVAERVGYPVLI-KAESGGGGR----------- 169

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  S   +   + +                    VY+E   +  R + + LL D
Sbjct: 170 ---GMRVARSADELADAVADAANEARAAFGDP-------RVYLEKLVEGGRHVEIQLLAD 219

Query: 126 RTSGMV 131
           R    +
Sbjct: 220 RYGNAI 225


>gi|281355629|ref|ZP_06242123.1| urea carboxylase [Victivallis vadensis ATCC BAA-548]
 gi|281318509|gb|EFB02529.1| urea carboxylase [Victivallis vadensis ATCC BAA-548]
          Length = 1199

 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 77/232 (33%), Gaps = 49/232 (21%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L +++ VP V    ++ +  AA  A + +  P+                 K    
Sbjct: 117 HRARELAQRFEVPLVPGSGLLPTAEAALEAARGIGYPVM---------------LKSTAG 161

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL------ 118
               G+ V  S   + +    I    L       +G  V   YVE    I  +L      
Sbjct: 162 GGGIGMCVCRSDAELAAGFERI--GRLSRNNFKDSGLFVEK-YVECSRHIEVQLFGDGRG 218

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           ++++L +R         STQ         +   + I +    P  G+     A+L     
Sbjct: 219 HVAILGERD-------CSTQ---------RRNQKVIEET---PAPGLPEATRAALHAAAR 259

Query: 179 LQGQARI-DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
             G+            +Y      D   LE+N  + +++G   V ++    D
Sbjct: 260 RLGEGVAYRSAGTVEFIYDC-RTGDFYFLEVNTRLQVEHG---VTEAVFGID 307


>gi|331087292|ref|ZP_08336362.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408978|gb|EGG88439.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 1075

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 33/190 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +A++ K  +P+ +  +  +V  A    + +  P+ V  S +  GGRG             
Sbjct: 672 RAMMEKLEIPMPESGMAVNVEEALEIAEKIGYPVMVRPSYVL-GGRGM------------ 718

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD-RT 127
                     V+ D   ++G         P       + ++       E     + D   
Sbjct: 719 ---------EVVHDAESMVGYMKAAVGVTPD----RPILIDRFLGHATECEADAISDGTH 765

Query: 128 SGMVAFIASTQ-GGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           + + A +   +  G+   + A   P K I +  +  +   T      + + + ++G   +
Sbjct: 766 AFVPAVMEHIELAGVHSGDSACIIPSKYISEENVKTIKEYT----RKIAEEMHVKGLMNM 821

Query: 186 DGGDLFPNLY 195
                   +Y
Sbjct: 822 QYAIENGKVY 831



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 26/118 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +    L  P+                 +        G  +  +
Sbjct: 140 GIEMARSEVAYSVDEALAIADKLGYPVV---------------LRPAYTMGGAGGGLVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
           ++ + +     L ++L           V  V VE+      EL L ++ D  + M+  
Sbjct: 185 VEELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVVRDANNNMITV 231


>gi|320106818|ref|YP_004182408.1| ATP-dependent carboxylate-amine ligase domain-containing protein
           ATP-grasp [Terriglobus saanensis SP1PR4]
 gi|319925339|gb|ADV82414.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Terriglobus saanensis SP1PR4]
          Length = 334

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+   +      VI     A +A + L  P+ VVK+ I   G+G  RF     D+K  +
Sbjct: 120 LLQSLGIRFLPSRVIHRASQAVAAAEGLRYPV-VVKANIGGSGKGIVRF-----DTKEQL 173

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
           +       +      I    L+ +     G  +  V
Sbjct: 174 KAAVDAGELDLGYDSI---ALVQEFIPARGGLITRV 206


>gi|297539391|ref|YP_003675160.1| urea carboxylase [Methylotenera sp. 301]
 gi|297258738|gb|ADI30583.1| urea carboxylase [Methylotenera sp. 301]
          Length = 1215

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 71/215 (33%), Gaps = 40/215 (18%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L  K  VP+  G  +++SV  A    + +  P+                 K      
Sbjct: 119 ARELAEKNGVPLLPGTGLLASVEEAHLNAEKIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+++  S   + +    +    L       TG     +Y+E      R + + +  D 
Sbjct: 164 GIGMQLIWSADELNAAFESV--QRLSRANFKSTG-----IYLEKYVQAARHIEVQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQARI 185
              ++A       G     V +   + I +    P   ++ E   SL D  ++L      
Sbjct: 217 LGKVIAL------GERDCSVQRRNQKVIEET---PAPHISDEVRKSLSDTAVKLGCALNY 267

Query: 186 DGGDLFPNLYKAFCDKD---MSLLEINPLIIMKNG 217
                   +Y    D D      LE+N  + +++G
Sbjct: 268 RSAGTVEFVY----DNDSGQFYFLEVNTRLQVEHG 298


>gi|290956913|ref|YP_003488095.1| acyl-CoA synthetase [Streptomyces scabiei 87.22]
 gi|260646439|emb|CBG69536.1| Putative acyl-CoA synthetase [Streptomyces scabiei 87.22]
          Length = 964

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A ALL +Y + + +     +   A  A + +  P+ +  +  H   R       L    
Sbjct: 744 EAGALLGRYGIRLRQARPALTPDEAARAAEAIGYPVALKTTAPHLRHRADLGGVRLDLAD 803

Query: 67  KGGVRVESS 75
           +  +R   S
Sbjct: 804 EEQLRRAYS 812


>gi|269866063|ref|XP_002652142.1| succinyl-CoA synthetase beta chain [Enterocytozoon bieneusi H348]
 gi|220063076|gb|EED41913.1| succinyl-CoA synthetase beta chain [Enterocytozoon bieneusi H348]
          Length = 54

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                 GGVRV +       ++ EIL  T+        G  V+ +  E+      E YL
Sbjct: 3   GGRGKAGGVRVCADDGEYRKNLGEILNMTI-------KGFTVHGLLAEEMMKPEHEYYL 54


>gi|168001226|ref|XP_001753316.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695602|gb|EDQ81945.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 562

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +++  VP   G   +I +   A      +  P+ ++K+    GGRG      L  +
Sbjct: 221 ARETMKRAGVPTVPGSAGLIETTEEAVRLAAEIGFPV-MIKATAGGGGRGM----RLANE 275

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
            +  V++   L+   S+     G+ 
Sbjct: 276 PEEFVKL---LQQARSEAGAAFGND 297


>gi|157143820|emb|CAL47323.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 8/86 (9%)

Query: 270 GCMVNGAGLAMATMDIIKLYGG--APANFLDVGGGADQDKVAAAFKIIT------SDSSV 321
             MV G G ++   D I    G    AN+ +  GG    +     + I        D S 
Sbjct: 1   WTMVAGGGASVVYADTIADLAGVKDLANYGEYSGGPTTAETQFYAETIFDLMTREKDPSG 60

Query: 322 KGILINIFGGIMRCDVLVKGILSAVK 347
           +G ++ I G I     + K      K
Sbjct: 61  RGKVLIIGGAIANFTDVAKTFTGIFK 86


>gi|23014105|ref|ZP_00053941.1| COG4770: Acetyl/propionyl-CoA carboxylase, alpha subunit
           [Magnetospirillum magnetotacticum MS-1]
          Length = 347

 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 28/177 (15%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L R+  V    G   VI     A    + +  P+                 K    
Sbjct: 118 ESKKLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVM---------------LKASAG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  +            G T  T +   +    + V+VE   +  R + + +L 
Sbjct: 163 GGGKGMRLAWNDAEAHE------GFTSATNEAKTSFGD-DRVFVEKFIEQPRHIEIQVLA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQ 180
           D   G V ++   +    I+   +   ++     + P       E   +L  ++  +
Sbjct: 216 DGQ-GTVLYLGERE--CSIQRRHQKVIEEAPSPFLTPETRKAMGEQACALARIVNYK 269


>gi|258616259|ref|ZP_05714029.1| carbamoyl phosphate synthase large subunit [Enterococcus faecium
           DO]
          Length = 513

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168


>gi|218190024|gb|EEC72451.1| hypothetical protein OsI_05793 [Oryza sativa Indica Group]
          Length = 490

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 41/269 (15%)

Query: 162 LIGVTSEDVASLCDMLELQ-----GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
             G++ E V  +  ++ L      G  + +       LY          + ++     + 
Sbjct: 107 AAGLSRESVVDVAGVVSLPREPVRGTTQQEVEIQVKKLYCISKATPNLPISVDDAARSEE 166

Query: 217 GRLRVLDS-----KISFDDNALYRHLDIQELRDVSEEDSREIEAKQHNL--SYIALDGNI 269
             ++   +      +  D    +R   + +LR  + +    ++ +  N+    +  +G +
Sbjct: 167 DVVKAKAAGEQLVHVGQDKRLDFR---VIDLRTPANQAIFRVQCEIENIFRQVLLSEGFV 223

Query: 270 GCMVNG--AGLAMATMDIIKL-YGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G        G +     + KL Y G PA          Q  +   F+ +           
Sbjct: 224 GIHTPKLIGGSSEGGAAVFKLDYNGQPACLAQSPQLHKQMAICGGFERVFEVGPCPAQKT 283

Query: 327 NIFGGIMRCDVLVKGILSAVKEVKIN-------------------IPLVMRLEGANVDIG 367
               GI  CDV+ +  +S    +  N                   +P  +R+     D G
Sbjct: 284 PTRTGICVCDVVDRLFVSMFDHLNKNCAKELEAINRQYPFKPLKYLPKTLRI---EYDEG 340

Query: 368 NRLIAESGLNVITAIDL-DDAAQKIVHAV 395
            R++ E+G++V    DL  ++ +K+   V
Sbjct: 341 IRMLKEAGVHVEAMGDLNTESEKKLGELV 369


>gi|254171778|ref|ZP_04878454.1| GMP synthase, C-terminal domain [Thermococcus sp. AM4]
 gi|214033674|gb|EEB74500.1| GMP synthase, C-terminal domain [Thermococcus sp. AM4]
          Length = 307

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A K +   L+ V        +G+  F       + G+ +         D  
Sbjct: 30  VDSSTAAILAHKAIGDRLHAVFVNTGFMRKGEPEFVVKTFRDEFGLNLHY------VDAS 83

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           E     L          ++   V++E   +I +E+    L+  T     +I S +G +  
Sbjct: 84  ERFFKALKGVTDPEEKRKIIGRVFIEVFEEIAKEINADFLIQGTIA-PDWIES-RGKIKS 141

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+++   LI+PL  +  ++V  L   L L 
Sbjct: 142 HHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELGLP 178


>gi|120611860|ref|YP_971538.1| phosphoribosylamine--glycine ligase [Acidovorax citrulli AAC00-1]
 gi|120590324|gb|ABM33764.1| phosphoribosylamine--glycine ligase [Acidovorax citrulli AAC00-1]
          Length = 426

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 15/96 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA +R++ +P A     +    A + I  L  P+ VVK+   A G+             
Sbjct: 106 SKAFMRRHGIPTADYDTFTDPALAHAFIDRLGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  + +     +  +L            G+RV
Sbjct: 152 -GVVVAMTAREAHDAVDFMLVDNKYGVSHNEGGARV 186


>gi|262369736|ref|ZP_06063064.1| phosphoribosylamine-glycine ligase [Acinetobacter johnsonii SH046]
 gi|262315804|gb|EEY96843.1| phosphoribosylamine-glycine ligase [Acinetobacter johnsonii SH046]
          Length = 427

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V+AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVNAAKAFVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +     I ++L       + G  G   + V +E+        ++ ++
Sbjct: 154 -GVIVAMTNQEAFDAIDDMLA----GNKFGDAG---SRVVIEEFLAGEEASFICMI 201


>gi|254804055|ref|YP_003082276.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           alpha14]
 gi|254667597|emb|CBA03355.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           alpha14]
          Length = 423

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 182


>gi|188532336|ref|YP_001906133.1| Phosphoribosylamine-glycine ligase [Erwinia tasmaniensis Et1/99]
 gi|188027378|emb|CAO95225.1| Phosphoribosylamine-glycine ligase [Erwinia tasmaniensis Et1/99]
          Length = 426

 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYVREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +     I ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTQQEAEDAIEDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|260770477|ref|ZP_05879410.1| protein acetyltransferase [Vibrio furnissii CIP 102972]
 gi|260615815|gb|EEX41001.1| protein acetyltransferase [Vibrio furnissii CIP 102972]
          Length = 895

 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 17/137 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ +N  V    + S    A    +T+  P+ V         + +       +D +G +
Sbjct: 501 LLKCFNFNVLPTWIASDASEAVHIAETIGYPVAV---------KLRSPDIAHKSDVQGVM 551

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
               +   V S  + IL  T I+  +      ++ + V+  A +    EL + +  D T 
Sbjct: 552 LNLRNSAEVASAAQAILDRTQISYPSAN----IHGLLVQGMAKLAGGEELRIKVKHDTTF 607

Query: 129 GMVAFIASTQGGMDIEE 145
           G V  +   QGG +  E
Sbjct: 608 GPVILLG--QGGSEWNE 622



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 26/141 (18%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAIDTLLERGGKLAELEASVFETLNQCLPQSWSHSNPIDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +   A   +     +  ILI +    I   +   + I+ A+K    +    +  
Sbjct: 354 GDADHTRYVNALNAVLDSDDIDAILIMHSPSAIAHSEQTAQVIVDAIKAHPRSPRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLN 377
             +         ++  ++G+ 
Sbjct: 414 NWSGELTAKPARQIFNQAGIP 434


>gi|324110917|gb|EGC04909.1| phosphoribosylamine-glycine ligase [Escherichia fergusonii B253]
          Length = 429

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|291276719|ref|YP_003516491.1| putative ligase/carboxylase [Helicobacter mustelae 12198]
 gi|290963913|emb|CBG39750.1| putative ligase/carboxylase [Helicobacter mustelae 12198]
          Length = 415

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 17/113 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
            +++ VP +   ++        AI+ +  P+ +               K       GGV 
Sbjct: 119 FKEHGVPSSPFFLLEHEEELAKAIEVIGFPMII---------------KPYDFGGSGGVY 163

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +  + K     +   L   +I +         +   +E   D   E+ + +L 
Sbjct: 164 LARNPKEASEKLA--LSKAIIAQYKNAFKIAGDKYLIEKYIDTQEEVSVEVLC 214


>gi|260774393|ref|ZP_05883307.1| phosphoribosylamine--glycine ligase [Vibrio metschnikovii CIP
           69.14]
 gi|260610520|gb|EEX35725.1| phosphoribosylamine--glycine ligase [Vibrio metschnikovii CIP
           69.14]
          Length = 429

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----DNSFGEAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|269836967|ref|YP_003319195.1| carbamoyl-phosphate synthase, large subunit [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786230|gb|ACZ38373.1| carbamoyl-phosphate synthase, large subunit [Sphaerobacter
           thermophilus DSM 20745]
          Length = 1080

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L    +P   G  ++S+ AA    + +  P+ V  S +  G
Sbjct: 682 LANLGIPQPPGDAVTSLEAAIEVAERIGYPVLVRPSYVLGG 722


>gi|157382754|gb|ABV48814.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 92

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 276 AGLAMATMDIIKLYGGAP--ANFLDVGGGADQDKV----AAAFKIITSDSSVKGILINIF 329
            G ++   D I    G    AN+ +  GG  + +        F ++T     +G ++NI 
Sbjct: 7   GGASVVYADTIADLAGVEDLANYGEYSGGPTESETQFYAETIFDLMTRYEDERGKILNIG 66

Query: 330 GGIMRCDVLVK---GILSAVKE 348
           G I     + K   GI+ A+ +
Sbjct: 67  GAIANFTDVAKTFTGIIKALDK 88


>gi|145250613|ref|XP_001396820.1| pyruvate carboxylase [Aspergillus niger CBS 513.88]
 gi|134082342|emb|CAK42357.1| unnamed protein product [Aspergillus niger]
          Length = 650

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 12/112 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK L  + +VPV   +   +       + +K +  P+ V K+    GGRG  R      
Sbjct: 122 QAKQLAVECDVPVLPAMAQPTADVAEVRAFVKQVQYPVMV-KAVDGGGGRGI-RLVYGDE 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
             +G VR   +            G   + K        V    + DG ++  
Sbjct: 180 GLEGAVRGAVN--------ESPSGMVFVEKAAVKGFRHVEVQIIGDGVEVRH 223


>gi|75906739|ref|YP_321035.1| acetyl-CoA carboxylase biotin carboxylase subunit [Anabaena
           variabilis ATCC 29413]
 gi|75700464|gb|ABA20140.1| acetyl-CoA carboxylase carboxyltransferase subunit alpha [Anabaena
           variabilis ATCC 29413]
          Length = 447

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 24/120 (20%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++ +        K +  P+ ++K+    GGR           
Sbjct: 120 AKETMQKAGVPTVPGSEGLVETEQEGLELAKDIGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S    +       G        G  G     VY+E   +  R +   +L D
Sbjct: 168 ---GMRLVRSPDEFVKLFLAAQGE--AGAAFGNAG-----VYIEKFIERPRHIEFQILAD 217


>gi|11497836|ref|NP_069058.1| pyruvate carboxylase subunit A [Archaeoglobus fulgidus DSM 4304]
 gi|6685811|sp|O30019|PYCA_ARCFU RecName: Full=Pyruvate carboxylase subunit A; AltName: Full=Pyruvic
           carboxylase A
 gi|2650421|gb|AAB91012.1| biotin carboxylase (acc) [Archaeoglobus fulgidus DSM 4304]
          Length = 506

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 8   AKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKS 47
           ++  +++  VPV  G   I +V  A+   + +  P+ V  S
Sbjct: 119 SRESMQRAGVPVIPGSPKIDTVDEAKEWAEKIGYPVAVKAS 159


>gi|325663772|ref|ZP_08152176.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470265|gb|EGC73498.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 1075

 Score = 39.5 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 33/190 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +A++ K  +P+ +  +  +V  A    + +  P+ V  S +  GGRG             
Sbjct: 672 RAMMEKLEIPMPESGMAVNVEEALEIAEKIGYPVMVRPSYVL-GGRGM------------ 718

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD-RT 127
                     V+ D   ++G         P       + ++       E     + D   
Sbjct: 719 ---------EVVHDAESMVGYMKAAVGVTPD----RPILIDRFLGHATECEADAISDGTH 765

Query: 128 SGMVAFIASTQ-GGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           + + A +   +  G+   + A   P K I +  +  +   T      + + + ++G   +
Sbjct: 766 AFVPAVMEHIELAGVHSGDSACIIPSKYISEENVKTIKEYT----RKIAEEMHVKGLMNM 821

Query: 186 DGGDLFPNLY 195
                   +Y
Sbjct: 822 QYAIENGKVY 831



 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 26/118 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +    L  P+                 +        G  +  +
Sbjct: 140 GIEMARSEVAYSVDEALAIADKLGYPVV---------------LRPAYTMGGAGGGLVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
           ++ + +     L ++L           V  V VE+      EL L ++ D  + M+  
Sbjct: 185 VEELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVVRDANNNMITV 231


>gi|317126342|ref|YP_004100454.1| phosphoribosylamine--glycine ligase [Intrasporangium calvum DSM
           43043]
 gi|315590430|gb|ADU49727.1| phosphoribosylamine--glycine ligase [Intrasporangium calvum DSM
           43043]
          Length = 426

 Score = 39.5 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 15/83 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP     V +++   E+A+  L  P +VVK    A G+             
Sbjct: 106 AKEVMAAAEVPTGLAHVCTTLDEVEAALDVLGTP-HVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGST 90
            GV V  S +  +   +  L   
Sbjct: 152 -GVVVTDSREEALLHAKWCLDKE 173


>gi|299134539|ref|ZP_07027731.1| CoA-binding domain protein [Afipia sp. 1NLS2]
 gi|298590349|gb|EFI50552.1| CoA-binding domain protein [Afipia sp. 1NLS2]
          Length = 710

 Score = 39.5 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 80/224 (35%), Gaps = 19/224 (8%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +     V+ +S   A  A   L  P+ V+K +             L     GG
Sbjct: 502 KLLDQCGIVHIPTVLTTSADEAAKAANKLGYPV-VLKIE---------SPDILHKTEAGG 551

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V +  + +   + +R+   + +   +     +R++ V V+  A    E  + L  D   G
Sbjct: 552 VMLRLTDE---AKVRQAFDAIMANAKKYKPNARLHGVVVQAMASGDTEFVIGLQNDPVFG 608

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-LCDMLELQGQARIDGG 188
               +A   GG+ IE +     +K+     +    + +    + L  +       R    
Sbjct: 609 -PVIMAGL-GGVLIEVLRDVVFRKVPLCEGEAADMLDALHGKAVLAGVRGRPPVDRKGLI 666

Query: 189 DLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFDD 230
           ++   + +        L  L++NP I++       +D  +  D+
Sbjct: 667 EMICAVSRLGAALGPRLSTLDLNP-IMLGETSATAVDWLMMLDE 709


>gi|291567673|dbj|BAI89945.1| cyanophycin synthetase [Arthrospira platensis NIES-39]
          Length = 895

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 32/105 (30%), Gaps = 3/105 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR   +PV +G VI        AI+ + G    +K      GRG          ++ 
Sbjct: 224 KQVLRDGGIPVPRGTVIRYFEDLTDAIEDVGGYPIAIKPLDGNHGRGITLDVTRWETAQA 283

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                S      S I E        +     G  V    V +   
Sbjct: 284 AYDAASEASKTRSVIIERFYKGRDHRVLVVNGRVVA---VSERVP 325


>gi|269959741|ref|ZP_06174120.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835495|gb|EEZ89575.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 877

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 15/135 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L  ++   +    + S V  A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFEQFGFDILPTWIASEVTEAVHMAENIGYPVAV---------KLRSPDIAHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
               + + V S  + IL +  L        G  V  +          EL +S+ VD+  G
Sbjct: 536 LNLRNSQEVSSAAQAILDTAKLSYPSANLQGLLVQGM---AKLGSAEELRVSIAVDKVFG 592

Query: 130 MVAFIASTQGGMDIE 144
            V  +   QGG D  
Sbjct: 593 PVILLG--QGGSDWN 605


>gi|239995219|ref|ZP_04715743.1| Phosphoribosylamine-glycine ligase [Alteromonas macleodii ATCC
           27126]
          Length = 430

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 23/123 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEIDPAIAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     IR++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMV 131
            + 
Sbjct: 206 VLP 208


>gi|229826552|ref|ZP_04452621.1| hypothetical protein GCWU000182_01927 [Abiotrophia defectiva ATCC
           49176]
 gi|229789422|gb|EEP25536.1| hypothetical protein GCWU000182_01927 [Abiotrophia defectiva ATCC
           49176]
          Length = 422

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A   V +S   A   +K    P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYEVFNSADKALEYLKDARYPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  +     + ++ I    +  K+ G  G   N + +E+  
Sbjct: 152 -GVLICENKDEAFNGVKTI----MEDKKFGNAG---NTLVIEEFM 188


>gi|228966968|ref|ZP_04128006.1| Pyruvate carboxylase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792702|gb|EEM40266.1| Pyruvate carboxylase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 1058

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 44  IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELGE 95

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 96  SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 141

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 142 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 192

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 193 LVK---DDEFYFIEVNPRVQVE 211


>gi|291528334|emb|CBK93920.1| phosphoribosylamine--glycine ligase [Eubacterium rectale M104/1]
          Length = 424

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDAKEALKYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     +R I    +  K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVRTI----MEDKKFGTAG---NTMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GKTIKIMSSAQD 212


>gi|291525563|emb|CBK91150.1| phosphoribosylamine--glycine ligase [Eubacterium rectale DSM 17629]
          Length = 424

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDAKEALKYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     +R I    +  K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVRTI----MEDKKFGTAG---NTMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GKTIKIMSSAQD 212


>gi|169350385|ref|ZP_02867323.1| hypothetical protein CLOSPI_01153 [Clostridium spiroforme DSM 1552]
 gi|169292705|gb|EDS74838.1| hypothetical protein CLOSPI_01153 [Clostridium spiroforme DSM 1552]
          Length = 416

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++N+P AK   ++S   A  AI     P  V+K+   A G+             
Sbjct: 106 SKDFMVRHNIPTAKYKEVNSYDEAIEAINDFDYP-LVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV +  ++    + ++E++
Sbjct: 152 -GVVIVDNVDDAKATLKEMM 170


>gi|218777877|ref|YP_002429195.1| carbamoyl phosphate synthase large subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759261|gb|ACL01727.1| Carbamoyl phosphate synthetase, large subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1066

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA + K  + + K  V+++V  A+ A   L  P+ V               +        
Sbjct: 133 KATMNKLGIEMPKNTVVTTVEDAQKAAAELGFPVVV---------------RPAYTMGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  + + +       L ++           RV  V +E+      EL L ++ D  +
Sbjct: 178 GGGMVFNREELDVIASRGLSAS-----------RVGQVLIEESVLGWEELELEVVRDAKN 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 QRITV 231


>gi|152992698|ref|YP_001358419.1| carbamoyl phosphate synthase large subunit [Sulfurovum sp. NBC37-1]
 gi|151424559|dbj|BAF72062.1| carbamoylphosphate synthase, large subunit [Sulfurovum sp. NBC37-1]
          Length = 1091

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +       ++  A  A K +  PL +  S   AG               G
Sbjct: 131 KEAMIKIGMDLPISQYAYNMDEALDAAKNIGFPLIIRASYTLAG---------------G 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++      +R            G   S ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVAYNMDEFKEIVRG-----------GLEASPISEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDI 143
                I  +    D 
Sbjct: 225 N--CIIVCSIENFDP 237


>gi|118470640|ref|YP_884747.1| acetyl-/propionyl-coenzyme A carboxylase alpha chain [Mycobacterium
           smegmatis str. MC2 155]
 gi|118171927|gb|ABK72823.1| acetyl-/propionyl-coenzyme A carboxylase alpha chain [Mycobacterium
           smegmatis str. MC2 155]
          Length = 669

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 62/207 (29%), Gaps = 37/207 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA-----ESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           AK ++    VPV  GV + +   A       A      P+ V K+    GGR        
Sbjct: 125 AKEMMAAAGVPVLPGVTVGADEDADPDKLRKAAAETGFPILV-KAAFGGGGR-------- 175

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                 G+R+ +    ++  +    G+          G     V++E   +  R + + +
Sbjct: 176 ------GMRIVADEDELLEAVA---GARREAASAFGDG----TVFLEKFVESPRHIEVQI 222

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
             D        +   +    I+   +   ++     +DP   +  E   +     +    
Sbjct: 223 FGDSHG---TVVHLGERECSIQRRYQKIIEEAPSTAVDPA--LREELGRAAVAAGKALAY 277

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEIN 209
                 +          D     LE+N
Sbjct: 278 EGAGTVEFVMA-----PDGSFYFLEVN 299


>gi|325499263|gb|EGC97122.1| phosphoribosylamine-glycine ligase [Escherichia fergusonii ECD227]
          Length = 433

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 158 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|153941029|ref|YP_001392951.1| biotin carboxylase [Clostridium botulinum F str. Langeland]
 gi|152936925|gb|ABS42423.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum F str. Langeland]
          Length = 448

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPVVVKAS 160


>gi|157371983|ref|YP_001479972.1| GCN5-related N-acetyltransferase [Serratia proteamaculans 568]
 gi|157323747|gb|ABV42844.1| GCN5-related N-acetyltransferase [Serratia proteamaculans 568]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 55/147 (37%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q+  +L+ Y++      +      A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQS--ILQAYDLTTLPTWIAEDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTATEVQRAADAILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +++  D   G +  +   +GG++  +
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEWRQ 610


>gi|85708894|ref|ZP_01039960.1| S6 modification enzyme RimK [Erythrobacter sp. NAP1]
 gi|85690428|gb|EAQ30431.1| S6 modification enzyme RimK [Erythrobacter sp. NAP1]
          Length = 301

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +  +L KY + +      +    AE  IK + GP  V+K  +  G +G G        S 
Sbjct: 103 SMQILAKYGLGLPLTAYANDPKQAEEIIKAVNGPPVVIK--LLEGTQGIGVVLAETMSSA 160

Query: 68  GGVRVESSLKS----VISDIREILGSTLITKQTGPTGSRV 103
             V       +    V   I+E  G+ +     G  G  V
Sbjct: 161 KSVIEAFRGANVNILVQEFIKEAGGTDIRALVVG--GKVV 198


>gi|57505533|ref|ZP_00371460.1| carbamoyl-phosphate synthase, large subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016080|gb|EAL52867.1| carbamoyl-phosphate synthase, large subunit [Campylobacter
           upsaliensis RM3195]
          Length = 1089

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 45/171 (26%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +          A+  +  PL +  S    G                
Sbjct: 135 KECMKKIGMDLPKSMYAYDYEETLKAVDEIGFPLMIRASYTLGG---------------A 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +L          L  +            ++ + +E+     +E  + ++ D+  
Sbjct: 180 GSGVVYNLDEFKDLATAALSLS-----------PIHEILIEESLLGWKEYEMEVIRDKFD 228

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T             
Sbjct: 229 NCIIV-------CSIENLDPMGVHTGDSITIAPALTLTDKEYQAMRNASFA 272


>gi|326913924|ref|XP_003203281.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like [Meleagris gallopavo]
          Length = 782

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 233 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 277

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 278 GGGKGMRIAWDDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 330

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   ++     
Sbjct: 331 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALAKAVKYSSAG 387

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 388 TVEFLVDSSKNFY--FLEMNTRLQVEHPVTECITG 420


>gi|323132511|gb|ADX19941.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 433

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 158 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|297617745|ref|YP_003702904.1| carbamoyl-phosphate synthase, large subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145582|gb|ADI02339.1| carbamoyl-phosphate synthase, large subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 1068

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 53/191 (27%), Gaps = 44/191 (23%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L +K       PV +  ++  V AA    + +  P+ V               +    
Sbjct: 129 RELFKKTMQEIGEPVPESTIVEDVEAAVEFAQRIGYPVIV---------------RPAYT 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G     S   +     + L  ++           ++ V +E      +E+   ++ 
Sbjct: 174 LGGTGGGTAYSEGELRVIATKGLKMSV-----------IHQVLIERSVAGFKEIEFEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDML 177
           D     +           +E +          +++ P + +  E+          +   L
Sbjct: 223 DANDNCITI-------CSMENIDPMGIHTGDSIVVAPALTLNDEEYQMLRNASLKIIRAL 275

Query: 178 ELQGQARIDGG 188
            + G   I   
Sbjct: 276 GIAGGCNIQFA 286



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 5/96 (5%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS--K 67
            L+    +P   G  ++S+       + +  P+ V  S +  G   +  + E       +
Sbjct: 673 ELVESLGIPRPPGGSVTSIEGGLEVAERIGYPVLVRPSYVLGGRAMEIVYNETEMVEYMR 732

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           G V+V          + + LG   +       G  V
Sbjct: 733 GAVKVSR---EFPILVDKYLGGKELEVDAISDGQDV 765


>gi|221632246|ref|YP_002521467.1| carbamoyl-phosphate synthase large subunit [Thermomicrobium roseum
           DSM 5159]
 gi|254813666|sp|B9KXM5|CARB_THERP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|221156776|gb|ACM05903.1| carbamoyl-phosphate synthase, large subunit [Thermomicrobium roseum
           DSM 5159]
          Length = 1078

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +P   G  ++++  A    + +  P+ V  S +  G
Sbjct: 680 LHELGIPQPPGAGVTTLEEALETAERIGYPVLVRPSYVLGG 720



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL +   PV + +   SV  A    + +P PL V  +    G             + G
Sbjct: 133 KELLLEIGEPVLESLTAYSVEDALRFAEEVPPPLIVRPAFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    S   +++ +           Q G   S +  V VE      +E+   ++ D   
Sbjct: 180 GI--AFSEDELVTLV-----------QRGIAASPIGQVLVERSLLGWKEIEYEVMRDAND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          +IE +          +++ P   ++  D          +   L + G
Sbjct: 227 TCITI-------CNIENLDPMGVHTGDSIVVAPSQTLSDRDYQMLRSAALKIIRALGIVG 279

Query: 182 QARIDGG 188
              I   
Sbjct: 280 GCNIQFA 286


>gi|170756739|ref|YP_001783232.1| biotin carboxylase [Clostridium botulinum B1 str. Okra]
 gi|169121951|gb|ACA45787.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum B1 str. Okra]
          Length = 448

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPVVVKAS 160


>gi|88597206|ref|ZP_01100441.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|218561941|ref|YP_002343720.1| carbamoyl phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|22095538|sp|Q9PIL7|CARB_CAMJE RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|88190267|gb|EAQ94241.1| carbamoyl-phosphate synthase, large subunit [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112359647|emb|CAL34432.1| carbamoyl-phosphate synthase large chain [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
          Length = 1089

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIDFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELTNTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|290961855|ref|YP_003493037.1| carbamoylphosphate synthetase large chain [Streptomyces scabiei
           87.22]
 gi|260651381|emb|CBG74503.1| carbamoylphosphate synthetase large chain [Streptomyces scabiei
           87.22]
          Length = 1102

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|254671286|emb|CBA08620.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           alpha153]
 gi|325133319|gb|EGC55985.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis M13399]
 gi|325143553|gb|EGC65874.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis
           M01-240013]
          Length = 423

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+    + +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGA---RIVIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|238923507|ref|YP_002937023.1| phosphoribosylamine--glycine ligase [Eubacterium rectale ATCC
           33656]
 gi|238875182|gb|ACR74889.1| phosphoribosylamine--glycine ligase [Eubacterium rectale ATCC
           33656]
          Length = 424

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDAKEALKYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+     +R I    +  K+ G  G   N + VE+         +S+L    
Sbjct: 152 -GVLICNTLEEAKEGVRTI----MEDKKFGTAG---NTMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  ++S Q 
Sbjct: 201 GKTIKIMSSAQD 212


>gi|187777419|ref|ZP_02993892.1| hypothetical protein CLOSPO_00986 [Clostridium sporogenes ATCC
           15579]
 gi|187774347|gb|EDU38149.1| hypothetical protein CLOSPO_00986 [Clostridium sporogenes ATCC
           15579]
          Length = 448

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPVVVKAS 160


>gi|168181064|ref|ZP_02615728.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium botulinum
           NCTC 2916]
 gi|182668134|gb|EDT80113.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium botulinum
           NCTC 2916]
          Length = 448

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPVVVKAS 160


>gi|156935547|ref|YP_001439463.1| hypothetical protein ESA_03409 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533801|gb|ABU78627.1| hypothetical protein ESA_03409 [Cronobacter sakazakii ATCC BAA-894]
          Length = 337

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 12/100 (12%)

Query: 268 NIGCMVNGAGLAMA------TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSV 321
            I  +        A        + ++ +G  PA  L V G       A A K +      
Sbjct: 178 EIAFITGSPDSPTALERLAGYKEALRQHGITPAASLIVEGKWTPASGAQAVKTLLESG-- 235

Query: 322 KGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEG 361
                +  G I   D +  G L A+ +  I +P  + L G
Sbjct: 236 ----ASFSGLIASNDDMAVGALKALTDAGIPVPQQVSLIG 271


>gi|153815196|ref|ZP_01967864.1| hypothetical protein RUMTOR_01428 [Ruminococcus torques ATCC 27756]
 gi|145847455|gb|EDK24373.1| hypothetical protein RUMTOR_01428 [Ruminococcus torques ATCC 27756]
          Length = 1086

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 37/194 (19%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R+      +P+ +  +  +V  A    + +  P+ V  S +  GGRG         
Sbjct: 679 RDLFREMMDKLEIPMPESGMAVTVDDALEIAEKIGYPVMVRPSYVL-GGRGM-------- 729

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                         V+ D   ++G         P       + ++       E     + 
Sbjct: 730 -------------EVVYDAESMVGYMKAAVGVTPD----RPILIDRFLGHATECEADAIS 772

Query: 125 D-RTSGMVAFIASTQ-GGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   + + A +   +  G+   + A   P K I +  +  +   T      + + + ++G
Sbjct: 773 DGTHAFVPAVMEHIELAGVHSGDSACIIPSKNISEENVKTIKEYT----RKIAEEMHVKG 828

Query: 182 QARIDGGDLFPNLY 195
              +        +Y
Sbjct: 829 LMNMQYAIENGKVY 842



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 28/128 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +  + L  P+                 +        G  +  +
Sbjct: 151 GIEMARSEVAYSVDEALAIAEKLGYPVV---------------LRPAYTMGGAGGGLVYN 195

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           +  + +     L ++L           V  V VE+      EL L ++  R +       
Sbjct: 196 VDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDAEGNMITV 242

Query: 136 STQGGMDI 143
                +D 
Sbjct: 243 CFIENIDP 250


>gi|29833409|ref|NP_828043.1| carbamoyl phosphate synthase large subunit [Streptomyces
           avermitilis MA-4680]
 gi|60389759|sp|Q827Q7|CARB_STRAW RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|29610532|dbj|BAC74578.1| putative carbamoyl-phosphate synthase large subunit [Streptomyces
           avermitilis MA-4680]
          Length = 1102

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|320101561|ref|YP_004177152.1| carbamoyl-phosphate synthase large subunit [Isosphaera pallida ATCC
           43644]
 gi|319748843|gb|ADV60603.1| carbamoyl-phosphate synthase large subunit [Isosphaera pallida ATCC
           43644]
          Length = 1083

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  +  A+  + +S+  A +    +  P  V++     GG G G           
Sbjct: 133 KKCMAEIGLECARSGLATSLEEARALRDEIGLPC-VLRPSFTLGGSGGG----------- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +         L  +            V+ V VE+     +E  + ++ D   
Sbjct: 181 ---IAFNKEEFERIAAHALELS-----------PVHSVLVEESVIGWKEYEMEVMRDGAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V           IE            + + P   ++ ++  +L D 
Sbjct: 227 NAVVV-------CSIENFDPMGVHTGDSITVAPAQTLSDKEYQTLRDA 267


>gi|303236372|ref|ZP_07322962.1| phosphoribosylamine--glycine ligase [Prevotella disiens FB035-09AN]
 gi|302483430|gb|EFL46435.1| phosphoribosylamine--glycine ligase [Prevotella disiens FB035-09AN]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++N+P A       +++      ++TL  P YV+K+   A G+           
Sbjct: 117 AKAFMKRHNIPTAAYETFDGTTIDEGLKFLETLKAP-YVLKADGLAAGK----------- 164

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    +++E+LG           G+    V +E+      E  + +L D
Sbjct: 165 ---GVLILPTLEEAKRELKEMLGGMF--------GNASAKVVIEEFLS-GIECSVFVLTD 212

Query: 126 RTSGMVA 132
            T+  + 
Sbjct: 213 GTNYQIL 219


>gi|291483091|dbj|BAI84166.1| phosphoribosylamine--glycine ligase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 422

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 15/119 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY++P A+    +S   A++ +     P+ V+K+   A G+G      +    +
Sbjct: 106 AKDLMKKYDIPTAEYDTFTSFDEAKAYVLEKGAPI-VIKADGLAAGKG----VTVAMTEE 160

Query: 68  GGVRVESSLKS--------VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
             +                    I E L     +      G +V  + +    D  R  
Sbjct: 161 EAIACLHDFLEDEKFGDASASVVIEEYLSGEEFSLMAFVKGEKVYPMVIAQ--DHKRAF 217


>gi|261393463|emb|CAX51109.1| phosphoribosylamine--glycine ligase (GARS; glycinamide
           ribonucleotide synthetase; phosphoribosylglycinamide
           synthetase) [Neisseria meningitidis 8013]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+    + +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LDNKMGNAGA---RIVIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
           + +  
Sbjct: 203 NVLPM 207


>gi|226951049|ref|YP_002806140.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226844446|gb|ACO87112.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 448

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPVVVKAS 160


>gi|226226917|ref|YP_002761023.1| hypothetical protein GAU_1511 [Gemmatimonas aurantiaca T-27]
 gi|226090108|dbj|BAH38553.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 405

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR   VPVA+  +I+S   A   +  +  P+ VVK    AG R   R ++       
Sbjct: 118 KDVLRAAGVPVARHALITSALDARHFVAQVGYPI-VVKPPAGAGARSTERVRDDAELESM 176

Query: 69  GVRVESSLKSVISDIREILGSTLI 92
             R   S          +LG   +
Sbjct: 177 LARFAPS------AADPMLGEEFL 194


>gi|225570757|ref|ZP_03779780.1| hypothetical protein CLOHYLEM_06860 [Clostridium hylemonae DSM
           15053]
 gi|225160219|gb|EEG72838.1| hypothetical protein CLOHYLEM_06860 [Clostridium hylemonae DSM
           15053]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A          A + +KT   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYENFEDPDEALAYLKTAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +   + ++ I    ++ KQ G +G   N + VE+         +S+L    
Sbjct: 152 -GVLICGTYEEAEAGVKTI----MVDKQFGTSG---NTMVVEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              V  + S Q 
Sbjct: 201 GNTVKTMTSAQD 212


>gi|153813275|ref|ZP_01965943.1| hypothetical protein RUMOBE_03692 [Ruminococcus obeum ATCC 29174]
 gi|149830688|gb|EDM85779.1| hypothetical protein RUMOBE_03692 [Ruminococcus obeum ATCC 29174]
          Length = 424

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A          A   + T      V+K+   A G+             
Sbjct: 106 SKDLMKKYGIPTAAYENFDDPQKALDYLHTQAKFPIVLKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+   + ++EI    +  K+ G  G   N + +E+         +S+L    
Sbjct: 153 -GVLICNTLEEAEAGVKEI----MEDKKFGSAG---NTMVIEEFMTGRE---VSVLSFVD 201

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 202 GKTIRTMTSAQD 213


>gi|148381534|ref|YP_001256075.1| acetyl-CoA carboxylase biotin carboxylase [Clostridium botulinum A
           str. ATCC 3502]
 gi|153932361|ref|YP_001385908.1| biotin carboxylase [Clostridium botulinum A str. ATCC 19397]
 gi|153935939|ref|YP_001389315.1| biotin carboxylase [Clostridium botulinum A str. Hall]
 gi|148291018|emb|CAL85155.1| biotin carboxylase [Clostridium botulinum A str. ATCC 3502]
 gi|152928405|gb|ABS33905.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152931853|gb|ABS37352.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum A str. Hall]
          Length = 448

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPVVVKAS 160


>gi|147421|gb|AAA24455.1| purD (EC 6.3.4.13) [Escherichia coli]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|328881131|emb|CCA54370.1| Carbamoyl-phosphate synthase large chain [Streptomyces venezuelae
           ATCC 10712]
          Length = 1102

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|301160671|emb|CBW20202.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|228941109|ref|ZP_04103665.1| Pyruvate carboxylase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974040|ref|ZP_04134613.1| Pyruvate carboxylase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228980632|ref|ZP_04140940.1| Pyruvate carboxylase [Bacillus thuringiensis Bt407]
 gi|228779100|gb|EEM27359.1| Pyruvate carboxylase [Bacillus thuringiensis Bt407]
 gi|228785676|gb|EEM33682.1| Pyruvate carboxylase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228818562|gb|EEM64631.1| Pyruvate carboxylase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326941720|gb|AEA17616.1| pyruvate carboxylase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 1148

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELGE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDEFYFIEVNPRVQVE 301


>gi|168823111|ref|ZP_02835111.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205340587|gb|EDZ27351.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320088605|emb|CBY98364.1| phosphoribosylamine-glycine ligase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|218899103|ref|YP_002447514.1| pyruvate carboxylase [Bacillus cereus G9842]
 gi|218545677|gb|ACK98071.1| pyruvate carboxylase [Bacillus cereus G9842]
          Length = 1148

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELGE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDEFYFIEVNPRVQVE 301


>gi|183220731|ref|YP_001838727.1| putative oxidase or carboxylase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910832|ref|YP_001962387.1| dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167775508|gb|ABZ93809.1| Dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167779153|gb|ABZ97451.1| Putative oxidase or carboxylase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 750

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF---KELPADSKG 68
           L+++ +P+ +   + S+  A+ A+  L  P  V+K   + G RG  +     +L    + 
Sbjct: 118 LKEFGLPIPRFAPVWSMQDAKDALDELTFP-LVMKPADNMGARGVIKVTNRDDLQVAFRH 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
             R   + + ++ +   + G  L        G  +    + D   I RE Y 
Sbjct: 177 AKRFCPTGELILEEY--MEGPELSVDALAFQGQ-IRMTGIADRI-IEREPYF 224


>gi|83648822|ref|YP_437257.1| D-alanine-D-alanine ligase-like protein [Hahella chejuensis KCTC
           2396]
 gi|83636865|gb|ABC32832.1| D-alanine-D-alanine ligase and related ATP-grasp enzyme [Hahella
           chejuensis KCTC 2396]
          Length = 331

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 4/101 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L R   VP    ++     +++   + L  P+ VVK        G    +E    +K
Sbjct: 133 SKQLFRAAGVPTPDWLMA--PASSDEVAQKLGWPV-VVKPSKQGSTVGLSVVREASELAK 189

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
             + +  +    +   + I G              V  + V
Sbjct: 190 -AIELAMNYDDEVMIEKFIPGREFTVGILDGRALLVGEIIV 229


>gi|291570840|dbj|BAI93112.1| phosphoribosylamine--glycine ligase [Arthrospira platensis NIES-39]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 40/223 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+    VP A G V +   AA+  I  +P    V+K+   A G+             
Sbjct: 108 AKDLMLAAGVPTAAGAVFTDPQAAKDYITQVP---IVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+     I  I                   + +E+     +E+ +  + D  
Sbjct: 152 -GVIVATTLEMAYDAITSISQGEFGQDNC--------QIVIEEFLQ-GQEVSVLAITDGK 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           +      A     +   +   +              G+ +     L     +    R   
Sbjct: 202 TIRPLIPAQDHKPIGEGDTGPNT------------GGMGAYAPTPLVSDTLMVKIQRDVL 249

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                 L     D    +     L+I  +G L VL+    F D
Sbjct: 250 EPTLHALQNRGIDYCGIIY--AGLMITPDGDLMVLEFNCRFGD 290


>gi|257889570|ref|ZP_05669223.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,410]
 gi|257825930|gb|EEV52556.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,410]
          Length = 1061

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|257884645|ref|ZP_05664298.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,501]
 gi|257820483|gb|EEV47631.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,501]
          Length = 1061

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|302559825|ref|ZP_07312167.1| phosphoribosylamine-glycine ligase [Streptomyces griseoflavus
           Tu4000]
 gi|302477443|gb|EFL40536.1| phosphoribosylamine-glycine ligase [Streptomyces griseoflavus
           Tu4000]
          Length = 417

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 32/106 (30%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++   A++A      P YVVK    A G+             
Sbjct: 106 AKDVMAAAGVPTARSYVCTTPEEADAAFGAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V   +++  +                      + V VE+  D
Sbjct: 152 -GVVVTDDVEAARAHAGA-----------------CDRVVVEEFLD 179


>gi|229916255|ref|YP_002884901.1| acetyl-CoA carboxylase, biotin carboxylase [Exiguobacterium sp.
           AT1b]
 gi|229467684|gb|ACQ69456.1| acetyl-CoA carboxylase, biotin carboxylase [Exiguobacterium sp.
           AT1b]
          Length = 447

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 29/184 (15%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK  + +  VPV  G   V+ +   A    + +  P+ ++K+    GGR          
Sbjct: 116 EAKRTMIESGVPVVPGSSGVV-TDEEAMELAREMGYPV-IIKATAGGGGR---------- 163

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+RV      +   +  ++ +    KQ    G     VY+E   +  R + + +L 
Sbjct: 164 ----GIRVARDEDEL---VSGLVATRKEAKQAFGNGD----VYLEKFIESFRHVEVQVLA 212

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+       I   +    I+   +   ++     ID     +  +        ++  G  
Sbjct: 213 DQFGN---VIHLGERDCTIQRRMQKLVEEAPSPAIDETTRQLMGDAAVKAAKAIQYSGAG 269

Query: 184 RIDG 187
            I+ 
Sbjct: 270 TIEF 273


>gi|149184757|ref|ZP_01863075.1| ribosomal protein S6 modification protein [Erythrobacter sp. SD-21]
 gi|148832077|gb|EDL50510.1| ribosomal protein S6 modification protein [Erythrobacter sp. SD-21]
          Length = 301

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +  +L K+ + +      +    AE  IK + GP  V+K  +  G +G G        S 
Sbjct: 103 SMQILAKHGLGLPLTAYANDPKQAEEIIKAVNGPPVVIK--LLEGTQGIGVVLAETMSSA 160

Query: 68  GGVRVESSLKS----VISDIREILGSTLITKQTGPTGSRV 103
             V       +    V   I+E  G+ +     G  G  V
Sbjct: 161 KSVIEAFRGANVNILVQEFIKEAGGTDIRALVVG--GKVV 198


>gi|69247604|ref|ZP_00604415.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Enterococcus faecium DO]
 gi|257878232|ref|ZP_05657885.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,230,933]
 gi|257880988|ref|ZP_05660641.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,502]
 gi|257892490|ref|ZP_05672143.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,408]
 gi|260559782|ref|ZP_05831961.1| carbamoyl-phosphate synthase [Enterococcus faecium C68]
 gi|293559354|ref|ZP_06675896.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1162]
 gi|293569852|ref|ZP_06680939.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1071]
 gi|294621724|ref|ZP_06700888.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           U0317]
 gi|314939735|ref|ZP_07846957.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133a04]
 gi|314941764|ref|ZP_07848641.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133C]
 gi|314948309|ref|ZP_07851701.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0082]
 gi|314952397|ref|ZP_07855404.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133A]
 gi|314991984|ref|ZP_07857437.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133B]
 gi|314995718|ref|ZP_07860808.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133a01]
 gi|68194772|gb|EAN09250.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Enterococcus faecium DO]
 gi|257812460|gb|EEV41218.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,230,933]
 gi|257816646|gb|EEV43974.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,502]
 gi|257828869|gb|EEV55476.1| carbamoyl-phosphate synthase [Enterococcus faecium 1,231,408]
 gi|260074006|gb|EEW62329.1| carbamoyl-phosphate synthase [Enterococcus faecium C68]
 gi|291587600|gb|EFF19477.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1071]
 gi|291598733|gb|EFF29786.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           U0317]
 gi|291606718|gb|EFF36110.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1162]
 gi|313590109|gb|EFR68954.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133a01]
 gi|313593419|gb|EFR72264.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133B]
 gi|313595514|gb|EFR74359.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133A]
 gi|313599442|gb|EFR78285.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133C]
 gi|313640964|gb|EFS05544.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0133a04]
 gi|313645290|gb|EFS09870.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           TX0082]
          Length = 1061

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|329765676|ref|ZP_08257246.1| lysine biosynthesis enzyme LysX [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137844|gb|EGG42110.1| lysine biosynthesis enzyme LysX [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 285

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           L+K+NVP  K     +  +A   ++ +  P  V+K  I + GRG  + K+
Sbjct: 98  LKKHNVPTPKTYFSFTSESASENLEKVGYP-LVIKPVIGSWGRGVMQLKD 146


>gi|328470677|gb|EGF41588.1| putative acetyltransferase [Vibrio parahaemolyticus 10329]
          Length = 877

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 17/136 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDEIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTS 128
               + + V +  + IL +   +  +      V+ + V+  A +    EL +S++VD+  
Sbjct: 536 LNLRNSREVSNAAQSILDTVKFSYPSAN----VHGLLVQGMAKLGSAEELRISIVVDKVF 591

Query: 129 GMVAFIASTQGGMDIE 144
           G V  +   QGG +  
Sbjct: 592 GPVILLG--QGGSEWN 605


>gi|293553493|ref|ZP_06674121.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1039]
 gi|291602370|gb|EFF32594.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1039]
          Length = 1061

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|294616600|ref|ZP_06696376.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1636]
 gi|294617884|ref|ZP_06697493.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1679]
 gi|291590550|gb|EFF22283.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1636]
 gi|291595829|gb|EFF27113.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           E1679]
          Length = 1061

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 714


>gi|261207809|ref|ZP_05922494.1| carbamoyl-phosphate synthase [Enterococcus faecium TC 6]
 gi|289566261|ref|ZP_06446693.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           D344SRF]
 gi|260078192|gb|EEW65898.1| carbamoyl-phosphate synthase [Enterococcus faecium TC 6]
 gi|289161968|gb|EFD09836.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecium
           D344SRF]
          Length = 1061

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N P+ +  ++++V  A      +  P+ V
Sbjct: 133 KQLMKELNQPIPESEIVNTVEEAVDFANKIGYPVIV 168


>gi|168005736|ref|XP_001755566.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693273|gb|EDQ79626.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 497

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K  VP   G   ++ S   A      +  P+ ++K+    GGRG     E    
Sbjct: 162 ARETMKKAGVPTVPGSEGLVQSTEEAVRLAHEIGFPV-MIKATAGGGGRGMRLANEPG-- 218

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 219 -----EFVKLLQQARSEAGAAFGND 238


>gi|85374305|ref|YP_458367.1| ribosomal protein S6 modification protein [Erythrobacter litoralis
           HTCC2594]
 gi|123099519|sp|Q2N9S1|RIMK_ERYLH RecName: Full=Ribosomal protein S6 modification protein
 gi|84787388|gb|ABC63570.1| ribosomal protein S6 modification protein [Erythrobacter litoralis
           HTCC2594]
          Length = 301

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +  +L KY + +      +    AE  IK + GP  V+K  +  G +G G        S 
Sbjct: 103 SMQILAKYGLGLPLTAYANDPKQAEEIIKAVNGPPVVIK--LLEGTQGIGVVLAETMSSA 160

Query: 68  GGVRVESSLKS----VISDIREILGSTLITKQTGPTGSRV 103
             V       +    V   I+E  G+ +     G  G  V
Sbjct: 161 KSVIEAFRGANVNILVQEFIKEAGGTDIRALVVG--GKVV 198


>gi|91977778|ref|YP_570437.1| CoA-binding [Rhodopseudomonas palustris BisB5]
 gi|91684234|gb|ABE40536.1| CoA-binding [Rhodopseudomonas palustris BisB5]
          Length = 697

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  + ALL    +PV    +  S + A +A   + GP+ V         + +     L
Sbjct: 483 LNEADSLALLASRGIPVVPHRLCLSRNEAVAAFTMIGGPVVVKGCSADIAHKSELGLVRL 542

Query: 63  PADSKGGVRVESSLKSVISDIREIL 87
                 GV    +   + +++ +I+
Sbjct: 543 ------GVTSADATGDIFTEMEQII 561


>gi|113461762|ref|YP_719831.1| phosphoribosylamine--glycine ligase [Haemophilus somnus 129PT]
 gi|112823805|gb|ABI25894.1| phosphoribosylamine--glycine ligase [Haemophilus somnus 129PT]
          Length = 432

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 113 KDFLARHHIPTAEYRSFTEVEKAIAYVREKGAPI-VVKADGLATGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      ++++L         G  G   N V +E+  +   E    ++VD  +
Sbjct: 158 GVIVAMTLAEAEKAVQDML----SGNAFGKAG---NRVVIEEFLE-GEEASFIVMVDGKN 209

Query: 129 GMVA 132
               
Sbjct: 210 VEPM 213


>gi|325267265|ref|ZP_08133927.1| phosphoribosylamine-glycine ligase [Kingella denitrificans ATCC
           33394]
 gi|324981202|gb|EGC16852.1| phosphoribosylamine-glycine ligase [Kingella denitrificans ATCC
           33394]
          Length = 426

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++K+ +P A+      V AA   ++    P+ V+K+   A G+             
Sbjct: 106 AKAFMQKHGIPTAQYRTFEQVDAAHDYVRQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  GSRV
Sbjct: 152 -GVVVAMTLDEAHAAIDDML----LGNKMGSAGSRV 182


>gi|311106363|ref|YP_003979216.1| CoA-binding protein [Achromobacter xylosoxidans A8]
 gi|310761052|gb|ADP16501.1| CoA binding domain protein 2 [Achromobacter xylosoxidans A8]
          Length = 693

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 29/228 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E++A AL R+  VPVA+G ++       +     P P+           R      EL
Sbjct: 484 LSEHEAGALFRELGVPVAQGQLVDPATLQHAV----PYPVV-----AKICSRDLAHKTEL 534

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            A   G     +   ++   ++E+L +     +     +R++ + V+     L E+ L  
Sbjct: 535 GAVRVG----IADGDTLRGAVQEMLENV----RRQAPDARIDGILVQPMEARLIEMILGY 586

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCDMLE 178
             D   G    + +  GG+  E       +      +D        +       +     
Sbjct: 587 RHDPLVGPTVLLGA--GGVAAELSPDYAVRLA---PVDQEEARRMILEVRQTRLIRGFRG 641

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDS 224
           L                +  C   + +   EINPL +  +G +  +D 
Sbjct: 642 LPQGDCEALARAIAAFSRLACATGVQIEEAEINPLFVRADG-VVAVDG 688


>gi|309783962|ref|ZP_07678607.1| phosphoribosylamine--glycine ligase [Shigella dysenteriae 1617]
 gi|308928333|gb|EFP73795.1| phosphoribosylamine--glycine ligase [Shigella dysenteriae 1617]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 105 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 150 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 201

Query: 129 GMVA 132
            +  
Sbjct: 202 VLPM 205


>gi|284051570|ref|ZP_06381780.1| cyanophycin synthetase [Arthrospira platensis str. Paraca]
          Length = 871

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 32/105 (30%), Gaps = 3/105 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +LR   +PV +G VI        AI+ + G    +K      GRG          ++ 
Sbjct: 200 KQVLRDGGIPVPRGTVIRYFEDLTDAIEDVGGYPIAIKPLDGNHGRGITLDVTRWETAQA 259

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                S      S I E        +     G  V    V +   
Sbjct: 260 AYDAASEASKTRSVIIERFYKGRDHRVLVVNGRVVA---VSERVP 301


>gi|261878660|ref|ZP_06005087.1| phosphoribosylamine-glycine ligase [Prevotella bergensis DSM 17361]
 gi|270334664|gb|EFA45450.1| phosphoribosylamine-glycine ligase [Prevotella bergensis DSM 17361]
          Length = 422

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++N+P A       ++V      ++TL  P YV+K+     G+           
Sbjct: 110 AKDFMKRHNIPTAAYATFDGTTVEEGIKFLETLKAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    + RE+LG           G+    V VE+   
Sbjct: 158 ---GVLIVPTLEEAKKEFREMLGGMF--------GNASAKVVVEEFLS 194


>gi|228909773|ref|ZP_04073596.1| Pyruvate carboxylase [Bacillus thuringiensis IBL 200]
 gi|228850062|gb|EEM94893.1| Pyruvate carboxylase [Bacillus thuringiensis IBL 200]
          Length = 1148

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELGE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDEFYFIEVNPRVQVE 301


>gi|218960763|ref|YP_001740538.1| phosphoribosylamine--glycine ligase (GARS) (glycinamide
           ribonucleotide synthetase) (phosphoribosylglycinamide
           synthetase) [Candidatus Cloacamonas acidaminovorans]
 gi|167729420|emb|CAO80331.1| phosphoribosylamine--glycine ligase (GARS) (glycinamide
           ribonucleotide synthetase) (phosphoribosylglycinamide
           synthetase) [Candidatus Cloacamonas acidaminovorans]
          Length = 415

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 16/105 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++  VP A   +  ++  A   I     P  V+K+   AGG+             
Sbjct: 104 AKNLMQEKGVPTAAFKIAKTIPQALEQIDYFGFP-AVIKNDGLAGGK------------- 149

Query: 68  GGVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDG 111
            GV V  +       +++I  S   +  +    G  V+   + DG
Sbjct: 150 -GVFVVKNPAEAQEALKKIHFSEKGVVVEEFLQGWEVSLFAITDG 193


>gi|323963776|gb|EGB59275.1| phosphoribosylamine-glycine ligase [Escherichia coli M863]
 gi|327250478|gb|EGE62188.1| phosphoribosylamine--glycine ligase [Escherichia coli STEC_7v]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|320353055|ref|YP_004194394.1| carbamoyl-phosphate synthase large subunit [Desulfobulbus
           propionicus DSM 2032]
 gi|320121557|gb|ADW17103.1| carbamoyl-phosphate synthase large subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 1074

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 33/166 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +RK  + V +  ++ ++  A +A + +  P+ V  S    G             + GGV 
Sbjct: 136 MRKIGLKVPESAIVHTIDEAMAAGERIGFPIIVRPSFTLGG-------------TGGGV- 181

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +   +   +   L  ++ T+           V +E      +E  L ++ DR +  V
Sbjct: 182 -AYNRAELNKMVTAGLDLSMTTE-----------VMLERSLLGWKEYELEVMRDR-NDNV 228

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
             I S      IE V          + + P   +T  +   + D  
Sbjct: 229 VIICS------IENVDAMGVHTGDSITVAPAQTLTDREYQEMRDAA 268


>gi|261212350|ref|ZP_05926635.1| protein acetyltransferase [Vibrio sp. RC341]
 gi|260838281|gb|EEX64937.1| protein acetyltransferase [Vibrio sp. RC341]
          Length = 893

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDFIYEKLNQTLPQSWSHSNPIDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  A   I+    ++  ILI +    I   +     ++ A+++        +  
Sbjct: 354 GDADHQRYVATLNILLESENIDAILIMHSPSAIAHSEQTALALVEAIQKHPRTKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          +  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARSIFNQAGIP--TYRTPESAVTAFMHLVE 451



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 93/267 (34%), Gaps = 39/267 (14%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ +N  V    + S    A    + +  P+ V         + +       +D +G +
Sbjct: 501 LLKCFNFNVLPTWIASDSTEAVHIAEMIGYPVAV---------KLRSPDIVHKSDVQGVM 551

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
               +   V +  + IL  T ++  +      ++ + V+  A +    EL + +  D T 
Sbjct: 552 LNLRNRIEVANAAQAILDRTQLSYPSAN----IHGLLVQGMAKLAGGEELRIKVKTDATF 607

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQ------G 181
           G V  +   QGG + +E             + PL   +    +       +++       
Sbjct: 608 GPVILLG--QGGSEWDESLDAAA------ALPPLNTTLARYLIVRAIRSGKIRLQKLPVP 659

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKI---SFDDNALYRHL 237
                  +    + +   +  ++  L+I+PL++  N +  +LD+ +    F  +A  R  
Sbjct: 660 IDIEGLSEFLVRISQMVIECPEVHELDIHPLLVNGN-QFTILDANLVLRKFHGDAQNR-- 716

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIA 264
               +R    E     +A+      + 
Sbjct: 717 --LAIRPYPTELEERCQARDGEWIMVR 741


>gi|149050263|gb|EDM02587.1| rCG36968, isoform CRA_b [Rattus norvegicus]
          Length = 723

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G   V+     A    + +  P+ +  S                 
Sbjct: 174 ESKLLAKRAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 218

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 219 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 271

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +DP       E   +L   ++     
Sbjct: 272 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDPETRRAMGEQAVALAKAVKYSSAG 328

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 329 TVEFLVDSQKNFY--FLEMNTRLQVEHPVTECITG 361


>gi|86158473|ref|YP_465258.1| phosphoribosylglycinamide formyltransferase 2 [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|123498050|sp|Q2IJJ5|PURT_ANADE RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|85774984|gb|ABC81821.1| formate-dependent phosphoribosylglycinamide formyltransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 387

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 26/141 (18%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           R+  +  A+    S+  A  +A+  +  P  VVK  + + G+G+             VR 
Sbjct: 113 RELGLATARYAYASTPEAFRAAVHEIGLPC-VVKPLMSSSGKGQSV-----------VRA 160

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E  L++  +              +G  G     V VE+      E+ L  +  R    + 
Sbjct: 161 EGDLEAAWAYA-----------MSGTRGDL-REVIVEEFIPFDSEITLLTVTQRRGETLF 208

Query: 133 F--IASTQGGMDIEEVAKDYP 151
              I   Q   D +E  + +P
Sbjct: 209 CPPIGHRQERGDYQESWQPHP 229


>gi|284050955|ref|ZP_06381165.1| phosphoribosylamine--glycine ligase [Arthrospira platensis str.
           Paraca]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 40/223 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+    VP A G V +   AA+  I  +P    V+K+   A G+             
Sbjct: 114 AKDLMLAAGVPTAAGAVFTDPQAAKDYITQVP---IVIKADGLAAGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+     I  I                   + +E+     +E+ +  + D  
Sbjct: 158 -GVIVATTLEMAYDAITSISQGEFGQDNC--------QIVIEEFLQ-GQEVSVLAITDGK 207

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           +      A     +   +   +              G+ +     L     +    R   
Sbjct: 208 TIRPLIPAQDHKPIGEGDTGPNT------------GGMGAYAPTPLVSDTLMVKIQRDVL 255

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                 L     D    +     L+I  +G L VL+    F D
Sbjct: 256 EPTLHALQNRGIDYCGIIY--AGLMITPDGDLMVLEFNCRFGD 296


>gi|257081570|ref|ZP_05575931.1| acetyl-CoA carboxylase [Enterococcus faecalis E1Sol]
 gi|256989600|gb|EEU76902.1| acetyl-CoA carboxylase [Enterococcus faecalis E1Sol]
          Length = 456

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEKIGYPV 155


>gi|229820529|ref|YP_002882055.1| carbamoyl-phosphate synthase, large subunit [Beutenbergia cavernae
           DSM 12333]
 gi|259585677|sp|C5C687|CARB_BEUC1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|229566442|gb|ACQ80293.1| carbamoyl-phosphate synthase, large subunit [Beutenbergia cavernae
           DSM 12333]
          Length = 1109

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 23/120 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    +P       +S+  A +    +  P+ V  S +  G                G
Sbjct: 679 EVLVAAGLPAPAFGTATSLAQARAVADRIGYPVLVRPSYVLGG---------------RG 723

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV--NCVYVEDGADILRELYLSLLVDRT 127
           + +   ++ +   +R        T   GP  + V  + V ++   D   E+ +  L D  
Sbjct: 724 MEIVYDVEQLTDYVRR------ATPTDGPADAPVFASPVLIDRFLDEAIEIDVDALYDGH 777


>gi|121611155|ref|YP_998962.1| phosphoribosylamine--glycine ligase [Verminephrobacter eiseniae
           EF01-2]
 gi|121555795|gb|ABM59944.1| phosphoribosylamine--glycine ligase [Verminephrobacter eiseniae
           EF01-2]
          Length = 426

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 18/106 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A     +   AA + +  L  P  V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTADYDSFTDPAAAHAFVDRLGAPC-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  +L+   + I  +L            G+RV    +E   +
Sbjct: 152 -GVVVALTLQQAHAGIDSMLLDNRYGVTHNAGGARV---LIEQFLE 193


>gi|330964545|gb|EGH64805.1| urea amidolyase-like protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 772

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A  A + +  P+                 K      
Sbjct: 119 ARALARQHGVPLLEGTELLDSLESAIVAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   + +       
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPEGMADELCAAAIKLAKAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|323974205|gb|EGB69337.1| phosphoribosylamine-glycine ligase [Escherichia coli TW10509]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|238899074|ref|YP_002924756.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466834|gb|ACQ68608.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 431

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+     +   A        G   V+K+   A G+              
Sbjct: 112 KNFLNRHNIPTAEHQ-AFTDQEAALHYVQAKGTPIVIKADGLAAGK-------------- 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  S K   S I+++L         G  G     + +E+  +   E    ++VD  +
Sbjct: 157 GVVVAMSQKEAESTIKDML----SGHAFGDAGH---RIVIEEFLE-GEEASFIVMVDGEN 208

Query: 129 GMVA 132
            +  
Sbjct: 209 VLPM 212


>gi|253686630|ref|YP_003015820.1| phosphoribosylamine/glycine ligase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753208|gb|ACT11284.1| phosphoribosylamine/glycine ligase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 428

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + +++   P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEVEPALAYVRSKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + I ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAENAIEDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|228922698|ref|ZP_04085997.1| Pyruvate carboxylase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836972|gb|EEM82314.1| Pyruvate carboxylase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 1148

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELGE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDEFYFIEVNPRVQVE 301


>gi|193084386|gb|ACF10042.1| carbamoyl-phosphate synthase ammonia chain [uncultured marine group
           II euryarchaeote AD1000-18-D2]
          Length = 1121

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
               + + +G   ++      A   +  P+ +  S +  GGRG
Sbjct: 731 AGNGLRMPRGSTATTPEEVRQAAHEIGYPVLIRPSYVL-GGRG 772


>gi|82778819|ref|YP_405168.1| phosphoribosylamine--glycine ligase [Shigella dysenteriae Sd197]
 gi|81242967|gb|ABB63677.1| phosphoribosylglycinamide synthetase [Shigella dysenteriae Sd197]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|51594654|ref|YP_068845.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis IP
           32953]
 gi|170022614|ref|YP_001719119.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis
           YPIII]
 gi|186893656|ref|YP_001870768.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis
           PB1/+]
 gi|51587936|emb|CAH19539.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis IP
           32953]
 gi|169749148|gb|ACA66666.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis
           YPIII]
 gi|186696682|gb|ACC87311.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis
           PB1/+]
          Length = 428

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V AA + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAETAVNDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|300934527|ref|ZP_07149783.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           resistens DSM 45100]
          Length = 1127

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  +    +S   A      +  P+ V  S +  GGRG
Sbjct: 696 KVLGRAGLPAPEYGTATSFEEARDVAARIGYPVLVRPSYVL-GGRG 740



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++     A+  L  P+ V  S    G      F E   +   
Sbjct: 138 KDIVEKIGGASARSRVCHNMDEVHEAVAELGLPVVVRPSFTMGGLGSGLAFTEEDLERIA 197

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGS 101
           G  + +S ++ +     ILG      +    G 
Sbjct: 198 GGGLAASPEANVLIEESILGWKEFELELMRDGK 230


>gi|120401370|ref|YP_951199.1| carbamoyl-phosphate synthase ATP-binding subunit L [Mycobacterium
           vanbaalenii PYR-1]
 gi|119954188|gb|ABM11193.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Mycobacterium vanbaalenii PYR-1]
          Length = 665

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 8   AKALLRKYNVPVAKGVVISS-----VHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++R   VPV  G  + S          +A   +  P+ V K+    GGRG
Sbjct: 123 AKDMMRAAGVPVLPGTTVESEEDQDPERLRTAAADIGFPILV-KAAFGGGGRG 174


>gi|33863683|ref|NP_895243.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           MIT 9313]
 gi|33635266|emb|CAE21591.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           MIT 9313]
          Length = 438

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ +  VP AK   +S+   A S +  +  P  VVK+   A G+             
Sbjct: 122 SKTLMAEAGVPTAKHWTVSTAADALSVLNQVQQP-LVVKADGLAAGK------------- 167

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S+K+    I+E+      + + G  G     V  E+  D
Sbjct: 168 -GVCVADSIKATAEAIQEVF-----SGRFGAAG--CQLVL-EERLD 204


>gi|124385344|ref|YP_001026783.1| phosphoribosylamine--glycine ligase [Burkholderia mallei NCTC
           10229]
 gi|124293364|gb|ABN02633.1| phosphoribosylamine--glycine ligase [Burkholderia mallei NCTC
           10229]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYVDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|255283497|ref|ZP_05348052.1| D-alanine--D-alanine ligase [Bryantella formatexigens DSM 14469]
 gi|255265954|gb|EET59159.1| D-alanine--D-alanine ligase [Bryantella formatexigens DSM 14469]
          Length = 341

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 52/182 (28%), Gaps = 33/182 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L R+  VP   GV++    + +SA +       VVK                   S  
Sbjct: 141 KQLFRENGVPAPAGVIVRKTDSPKSAAELGMELPCVVK--------------TACGGSSV 186

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  + +     ++                   + + VE    I  + Y   ++D  +
Sbjct: 187 GVYIVHTEEEFSEAVKNGFSYE-------------DKLIVEQ--YIRGQEYTVGVIDGKA 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT---SEDVASLCDMLELQGQARI 185
                  S   G    +        I          +T    E      D L L+  AR+
Sbjct: 232 Y-PIVEISPIAGFYDYKNKYQAGSTIETCPAPLSAELTQKMQEIALKAYDTLRLESYARM 290

Query: 186 DG 187
           D 
Sbjct: 291 DF 292


>gi|225435213|ref|XP_002282042.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1349

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      V      + +++        ++     +++     GG G G       
Sbjct: 210 RELFKQAMENIGVKTPPSGIGTTLDECMEIANSIGEFPLIIRPAFTLGGTGGG------- 262

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +   +  +  L ++L +            V VE      +E  L ++ 
Sbjct: 263 -------IAYNREEFEAICKSGLAASLTS-----------QVLVEKSLLGWKEYELEVMR 304

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE +          + + P   +T ++   L D
Sbjct: 305 D-LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 348


>gi|224585715|ref|YP_002639514.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224470243|gb|ACN48073.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322717123|gb|EFZ08694.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|297195535|ref|ZP_06912933.1| carbamoyl-phosphate synthase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721357|gb|EDY65265.1| carbamoyl-phosphate synthase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 1102

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|149201502|ref|ZP_01878476.1| CoA-binding protein [Roseovarius sp. TM1035]
 gi|149144550|gb|EDM32579.1| CoA-binding protein [Roseovarius sp. TM1035]
          Length = 682

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 69/217 (31%), Gaps = 37/217 (17%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           + + + +    ++     + +  +  P  V+K+        +G   +  A     V    
Sbjct: 488 HGLRIPQARRAATPAELTATLSDMALP-LVIKA--------EGLAHKTEAGGVIFVHHAD 538

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED--GADILRELYLSLLVDRTSGMVA 132
            L    +  R +                     +E+   A I  EL + +L D   G V 
Sbjct: 539 DLAEAQAKARAM---------------PCQSWLIEEMIAAPIA-ELLIGVLRDPAHGFVL 582

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            + +  GG   E +       +     D    ++   + +   +   +GQ   +   +  
Sbjct: 583 TLGA--GGTLTEILRDTTSLLLPVTEADLTQALS--HLRAAPLLGGYRGQPTANHAAILR 638

Query: 193 NL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
            +     Y       +  +EINPL+   +  +  +D+
Sbjct: 639 AVMAVQDYVIAHAATLEEVEINPLLCTASDAV-AVDA 674


>gi|16762282|ref|NP_457899.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143770|ref|NP_807112.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161617314|ref|YP_001591279.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197249645|ref|YP_002149083.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|213161650|ref|ZP_03347360.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213428475|ref|ZP_03361225.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213580342|ref|ZP_03362168.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213612382|ref|ZP_03370208.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213647188|ref|ZP_03377241.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289826731|ref|ZP_06545696.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|20139495|sp|Q8Z334|PUR2_SALTI RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|25293795|pir||AC0931 phosphoribosylglycineamide synthetase [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16504586|emb|CAD09469.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139405|gb|AAO70972.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161366678|gb|ABX70446.1| hypothetical protein SPAB_05165 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197213348|gb|ACH50745.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|282883185|ref|ZP_06291784.1| phosphoribosylamine--glycine ligase [Peptoniphilus lacrimalis
           315-B]
 gi|281296997|gb|EFA89494.1| phosphoribosylamine--glycine ligase [Peptoniphilus lacrimalis
           315-B]
          Length = 416

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 22/117 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KYN+P AK        +A+++++    P  V+K+     G+              
Sbjct: 107 KKFLEKYNIPTAKYKSFIDYDSAKNSLEEFSYP-LVIKADGLCLGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           GV +    K  +  + +I    +   Q    G     V +E+         L ++ +
Sbjct: 152 GVFICQDKKEALESLEKIFIDKIFKDQ----GK---KVVIEEFLKGFEASLLCIVSN 201


>gi|256026321|ref|ZP_05440186.1| phosphoribosylamine--glycine ligase [Escherichia sp. 4_1_40B]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|226952808|ref|ZP_03823272.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Acinetobacter sp. ATCC 27244]
 gi|226836429|gb|EEH68812.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Acinetobacter sp. ATCC 27244]
          Length = 373

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K+L  +  +PVA    + S+ + + A+  L  P+ V+K+ +  G  GKG+F     D
Sbjct: 102 KSLFDELGIPVAPYRAVDSLDSLKQAVTDLGLPI-VLKT-VTGGYDGKGQFVLRSED 156


>gi|219871532|ref|YP_002475907.1| phosphoribosylamine--glycine ligase [Haemophilus parasuis SH0165]
 gi|219691736|gb|ACL32959.1| phosphoribosylamine--glycine ligase [Haemophilus parasuis SH0165]
          Length = 431

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++N+P A+    + +  A + +     P+ V+K+   A G+             
Sbjct: 108 AKDFLARHNIPTAEYQTFTEIEPALAYLYQRNAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      ++++L         G  G   + V +E+      E    +++D  
Sbjct: 154 -GVIVAMTLAEAEEAVKDML----SGNAFGDAG---SRVVIEEFL-AGEEASFIVMIDGK 204

Query: 128 SGMVA 132
           +    
Sbjct: 205 NVEPM 209


>gi|170770126|ref|ZP_02904579.1| phosphoribosylamine--glycine ligase [Escherichia albertii TW07627]
 gi|170121008|gb|EDS89939.1| phosphoribosylamine--glycine ligase [Escherichia albertii TW07627]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|16767429|ref|NP_463044.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167994977|ref|ZP_02576067.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|131617|sp|P26977|PUR2_SALTY RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|154288|gb|AAA27198.1| 5-phosphoribosylglycinamide synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|6960361|gb|AAF33521.1| Salmonella typhimurium phosphoribosylamine--glycine ligase
           (SW:P26977); contains similarity to Pfam domain PF01071
           (GARS), Score=962, E=1.5e-285, N=1 [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16422734|gb|AAL23003.1| phosphoribosylglycinamide synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205327266|gb|EDZ14030.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261249279|emb|CBG27141.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996476|gb|ACY91361.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312915281|dbj|BAJ39255.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223375|gb|EFX48442.1| Phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|332990994|gb|AEF09977.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|332884714|gb|EGK04970.1| phosphoribosylamine-glycine ligase [Dysgonomonas mossii DSM 22836]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 26/130 (20%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++N+P AK        +  A   ++ L  P YV+K+   A G+           
Sbjct: 110 AKQFMMRHNIPTAKYKSFSLDELDEAYLFLEELEAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV + S ++    +++E+L            G     V +E+      E  + +L D
Sbjct: 158 ---GVLIISDIEEAKQELKEMLSGMF--------GDASKTVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVAFIA 135
             S  +  +A
Sbjct: 206 GDSYKILPVA 215


>gi|331028958|gb|AAA81142.3| Hypothetical protein F38B6.4 [Caenorhabditis elegans]
          Length = 975

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 24/108 (22%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++Y +P A  V +S  +V + +   + LP    VVK+   A G+           
Sbjct: 105 SKHFMKEYGLPTADFVTVSIENVKSLDCVFERLPWKNSVVKADGLAAGK----------- 153

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +    +   R IL       Q G  G  V    +E+  +
Sbjct: 154 ---GVIIPRNNAEAVEAARSILH-----GQFGNAGRTV---IIEERLE 190


>gi|295695397|ref|YP_003588635.1| acetyl-CoA carboxylase, biotin carboxylase [Bacillus tusciae DSM
           2912]
 gi|295410999|gb|ADG05491.1| acetyl-CoA carboxylase, biotin carboxylase [Bacillus tusciae DSM
           2912]
          Length = 446

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 28/183 (15%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +++  VP   G   +I+S   A    + +  P+ ++K+                  
Sbjct: 119 AKETMKRAGVPTVPGTDGLIASTEEALRVAEQIGYPV-IIKA--------------TAGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R   + + +   I   +  T      G  G     VY+E      R + + ++ D
Sbjct: 164 GGKGMRTAGTPEELAKGIE--MARTEAETAFGNPG-----VYLEKLVQEPRHVEIQIMAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
           R    V      +    I+   +   ++    ++ P L     E        +   G   
Sbjct: 217 RHGNAVYL---GERDCSIQRRHQKLIEEAPCPVLTPELRREMGEAAVRAALAVGYVGAGT 273

Query: 185 IDG 187
           ++ 
Sbjct: 274 VEF 276


>gi|293400953|ref|ZP_06645098.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305979|gb|EFE47223.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 1070

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K ++P   G    +V  A      +  P+ V  S +  G           AD K  
Sbjct: 672 EMLHKLDIPQPTGETAVTVEEALVIANKIGYPVLVRPSYVLGG--RAMEIVHNDADLK-- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQT 96
           V + +++K +  D   ++   ++ K+ 
Sbjct: 728 VYMATAVKEISHDAPILVDKYIVGKEM 754



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 7   QA--KALLRK--YNV--PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           QA  + L R+  Y +  PV +  ++ +V  A +  +T+  PL V  +    G
Sbjct: 125 QAEDRELFRELMYEIKEPVPESAIVHTVEEALAFAQTIGYPLVVRPAYTLGG 176


>gi|281357541|ref|ZP_06244029.1| acetyl-CoA carboxylase, biotin carboxylase [Victivallis vadensis
           ATCC BAA-548]
 gi|281316144|gb|EFB00170.1| acetyl-CoA carboxylase, biotin carboxylase [Victivallis vadensis
           ATCC BAA-548]
          Length = 455

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K  VP   G   ++ S   A      L  P+ ++K+    GGRG  R     A 
Sbjct: 119 ARETMKKAGVPTTPGSDGIVGSEAEALKIAHELKYPV-IIKAVAGGGGRGM-RIAHNDAS 176

Query: 66  SKGGVRVESSLKS 78
              G     +   
Sbjct: 177 LVQGYHAAKTEAE 189


>gi|291297094|ref|YP_003508492.1| lysine biosynthesis enzyme LysX [Meiothermus ruber DSM 1279]
 gi|290472053|gb|ADD29472.1| lysine biosynthesis enzyme LysX [Meiothermus ruber DSM 1279]
          Length = 281

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           L  + VP  +  + +    A   I+ +  P+ V+K  + + GR
Sbjct: 96  LEAHGVPQPRTALATEAEEALKLIEQMGYPV-VMKPVVGSWGR 137


>gi|193067795|ref|ZP_03048761.1| phosphoribosylamine--glycine ligase [Escherichia coli E110019]
 gi|192958770|gb|EDV89207.1| phosphoribosylamine--glycine ligase [Escherichia coli E110019]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|189220037|ref|YP_001940677.1| phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Methylacidiphilum infernorum V4]
 gi|189186895|gb|ACD84080.1| Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
           [Methylacidiphilum infernorum V4]
          Length = 390

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           K  L +   PVA   V+ ++    ++   L  P+ +   Q+   G+G+
Sbjct: 110 KQFLAQNGFPVAPFRVVRTLAELTASAVELGLPVVLKTVQLGYDGKGQ 157


>gi|160895377|ref|ZP_02076147.1| hypothetical protein CLOL250_02935 [Clostridium sp. L2-50]
 gi|156862948|gb|EDO56379.1| hypothetical protein CLOL250_02935 [Clostridium sp. L2-50]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 24/116 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +   +A  A         V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDAESA-LAYLETASFPIVLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--------GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV +   L+   + ++EI+        G+T++ ++   TG  V+ +   DG  I 
Sbjct: 152 -GVLICKDLEEAKAGVKEIMLDKHFGNAGNTMVIEEFM-TGREVSVLAFCDGTTIK 205


>gi|148671873|gb|EDL03820.1| phosphoribosylglycinamide formyltransferase, isoform CRA_b [Mus
           musculus]
          Length = 569

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|17567511|ref|NP_509122.1| hypothetical protein F38B6.4 [Caenorhabditis elegans]
          Length = 974

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 24/108 (22%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++Y +P A  V +S  +V + +   + LP    VVK+   A G+           
Sbjct: 105 SKHFMKEYGLPTADFVTVSIENVKSLDCVFERLPWKNSVVKADGLAAGK----------- 153

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +    +   R IL       Q G  G  V    +E+  +
Sbjct: 154 ---GVIIPRNNAEAVEAARSILH-----GQFGNAGRTV---IIEERLE 190


>gi|46849337|dbj|BAD17878.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Protopterus annectens]
          Length = 990

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 18/96 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P AK    ++   A + I +   P  VVK+   A G+             
Sbjct: 94  AKDFMDRHGIPTAKWKAFTNPLEACNFINSASFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V ++ +   S + +IL      K  G  G  +
Sbjct: 141 -GVIVAANKEEACSAVHDILQ----DKTFGAAGETI 171


>gi|38233917|ref|NP_939684.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200178|emb|CAE49859.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           diphtheriae]
          Length = 1118

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +LRK  +P       +S   A++    +  P+ V  S +  GGRG
Sbjct: 696 EVLRKAQLPAPAFGTATSFEEAKTVANNIGYPVLVRPSYVL-GGRG 740


>gi|228902453|ref|ZP_04066607.1| Pyruvate carboxylase [Bacillus thuringiensis IBL 4222]
 gi|228857197|gb|EEN01703.1| Pyruvate carboxylase [Bacillus thuringiensis IBL 4222]
          Length = 1148

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 41/204 (20%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELGE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D         
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILAD--------- 222

Query: 135 ASTQGGMD--IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLF 191
              +G +    E       +    + I P + ++ +    +CD   +L            
Sbjct: 223 --EEGNVAHLYERDCSVQRRHQKVVEIAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTV 280

Query: 192 PNLYKAFCDKDMSLLEINPLIIMK 215
             L K   D +   +E+NP + ++
Sbjct: 281 EFLVK---DDEFYFIEVNPRVQVE 301


>gi|229579282|ref|YP_002837680.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.G.57.14]
 gi|229581957|ref|YP_002840356.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.N.15.51]
 gi|228009996|gb|ACP45758.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.G.57.14]
 gi|228012673|gb|ACP48434.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.N.15.51]
          Length = 282

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            L R   +P+   ++ +S  AA  A + +  P+ + K  I + GR
Sbjct: 93  KLFR-NGIPIPDSIIAASPDAAMKAYEQMGFPV-IDKPPIGSWGR 135


>gi|160898961|ref|YP_001564543.1| phosphoribosylamine--glycine ligase [Delftia acidovorans SPH-1]
 gi|160364545|gb|ABX36158.1| phosphoribosylamine--glycine ligase [Delftia acidovorans SPH-1]
          Length = 427

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A     +   AA + +  L  P+ VVK+   A G+             
Sbjct: 107 SKDFMARHGIPTALYETFTDPVAAHAYVDRLGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+     +  +L            G+RV    +E+      E    +L D  
Sbjct: 153 -GVVVATTLQEAHDAVDFMLVDNKYGVAHNDGGARV---VIEEFL-AGEEASFIVLCDGK 207

Query: 128 S 128
           +
Sbjct: 208 N 208


>gi|118591256|ref|ZP_01548655.1| hypothetical protein SIAM614_16557 [Stappia aggregata IAM 12614]
 gi|118436332|gb|EAV42974.1| hypothetical protein SIAM614_16557 [Stappia aggregata IAM 12614]
          Length = 488

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 3/94 (3%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  + +   K +V+SS+  A      L  P+ V+K  I  G   +G F+   A+    
Sbjct: 292 ELLASHGIATPKTIVLSSLKEAGDLEAKLGSPI-VLK--IPDGSFSRGVFRVTGAEPIKE 348

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
              E   +S I   +E   +    +     G  +
Sbjct: 349 KLKELFQESAILLAQEYCPTDFDWRIGVLDGEPL 382


>gi|84489713|ref|YP_447945.1| pyruvate carboxylase subunit A [Methanosphaera stadtmanae DSM 3091]
 gi|84373032|gb|ABC57302.1| PycA [Methanosphaera stadtmanae DSM 3091]
          Length = 496

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L+ K  VP   G    I+ +  A+   K +  P+ ++KS    GG            
Sbjct: 119 SKQLMEKIGVPTVPGDKEGITDIEEAKKRAKEIGFPV-IIKSSAGGGGI----------- 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV      +    R I  +  + + T   G     VY+E   +  R +   +L D
Sbjct: 167 ---GMRVVYEEDEL---ARAIESTQNLAQATFGDG----TVYIEKYIEKPRHIEFQVLAD 216

Query: 126 RTSGMV 131
                +
Sbjct: 217 NHGNTI 222


>gi|79329027|ref|NP_001031968.1| CAC2; acetyl-CoA carboxylase/ biotin carboxylase [Arabidopsis
           thaliana]
 gi|332006574|gb|AED93957.1| biotin carboxylase [Arabidopsis thaliana]
          Length = 499

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S   A      +  P+ ++K+    GGRG    KE    
Sbjct: 191 ARETMKNAGVPTVPGSDGLLQSTEEAVRVANEIGFPV-MIKATAGGGGRGMRLAKEPG-- 247

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 248 -----EFVKLLQQAKSEAAAAFGND 267


>gi|21226140|ref|NP_632062.1| carbamoyl phosphate synthase large subunit [Methanosarcina mazei
           Go1]
 gi|22095493|sp|P58944|CARB_METMA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|20904365|gb|AAM29734.1| Carbamoyl-phosphate synthase large chain [Methanosarcina mazei Go1]
          Length = 1073

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  +P  +G   +S   A    K +  P+ V  S +  G   +  + E+  +     
Sbjct: 674 LMQELGIPQPEGGYATSQQEAIEVAKRIGFPVLVRPSYVLGGRAMEIVYDEIDLERYMKE 733

Query: 71  RVESSLK 77
            V  S +
Sbjct: 734 AVRVSPE 740



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 68/220 (30%), Gaps = 53/220 (24%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++        V     + S+  AE  ++ L  PL +  +    G            
Sbjct: 129 RELFKETMLSIGEKVPLSRAVHSLKEAEEVVEELGLPLIIRPAYTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +  + + ++      L  +           R+N V +E+      E+   ++ 
Sbjct: 177 ---AGGGIARTKEELLEITERGLRRS-----------RINQVLIEESVLGWAEVEYEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDML 177
           D     +          ++E +           ++ P   ++ E+          +   L
Sbjct: 223 DANDTCIVI-------CNMENIDPMGVHTGESAVVAPSQTLSDEEHQMLRSASIKIIRAL 275

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +++G   I           A  + D  ++E+NP +   + 
Sbjct: 276 KIEGGCNIQY---------ALKEGDYRIVEVNPRVSRSSA 306


>gi|16131835|ref|NP_418433.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli str. K-12 substr. MG1655]
 gi|89110033|ref|AP_003813.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli str. K-12 substr. W3110]
 gi|170083466|ref|YP_001732786.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli str. K-12 substr. DH10B]
 gi|187730149|ref|YP_001882691.1| phosphoribosylamine--glycine ligase [Shigella boydii CDC 3083-94]
 gi|188495477|ref|ZP_03002747.1| phosphoribosylamine--glycine ligase [Escherichia coli 53638]
 gi|238903062|ref|YP_002928858.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli BW2952]
 gi|254039262|ref|ZP_04873311.1| phosphoribosylglycineamide synthetase [Escherichia sp. 1_1_43]
 gi|300947387|ref|ZP_07161580.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 116-1]
 gi|300954763|ref|ZP_07167193.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 175-1]
 gi|301023376|ref|ZP_07187166.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 196-1]
 gi|301645738|ref|ZP_07245659.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 146-1]
 gi|307140697|ref|ZP_07500053.1| phosphoribosylamine--glycine ligase [Escherichia coli H736]
 gi|312974208|ref|ZP_07788378.1| phosphoribosylamine--glycine ligase [Escherichia coli 1827-70]
 gi|331644742|ref|ZP_08345860.1| phosphoribosylamine--glycine ligase [Escherichia coli H736]
 gi|417557|sp|P15640|PUR2_ECOLI RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|42596|emb|CAA36213.1| purD gene product [Escherichia coli K-12]
 gi|396344|gb|AAC43103.1| phosphoribosylglycineamide synthetase [Escherichia coli str. K-12
           substr. MG1655]
 gi|1790438|gb|AAC76979.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli str. K-12 substr. MG1655]
 gi|85676064|dbj|BAE77314.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli str. K12 substr. W3110]
 gi|169891301|gb|ACB05008.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli str. K-12 substr. DH10B]
 gi|187427141|gb|ACD06415.1| phosphoribosylamine--glycine ligase [Shigella boydii CDC 3083-94]
 gi|188490676|gb|EDU65779.1| phosphoribosylamine--glycine ligase [Escherichia coli 53638]
 gi|226838497|gb|EEH70527.1| phosphoribosylglycineamide synthetase [Escherichia sp. 1_1_43]
 gi|238862063|gb|ACR64061.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli BW2952]
 gi|260451166|gb|ACX41588.1| phosphoribosylamine/glycine ligase [Escherichia coli DH1]
 gi|299880896|gb|EFI89107.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 196-1]
 gi|300318262|gb|EFJ68046.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 175-1]
 gi|300452991|gb|EFK16611.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 116-1]
 gi|301075987|gb|EFK90793.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 146-1]
 gi|310331375|gb|EFP98640.1| phosphoribosylamine--glycine ligase [Escherichia coli 1827-70]
 gi|315138562|dbj|BAJ45721.1| phosphoribosylamine--glycine ligase [Escherichia coli DH1]
 gi|315617370|gb|EFU97976.1| phosphoribosylamine--glycine ligase [Escherichia coli 3431]
 gi|320172733|gb|EFW47967.1| Phosphoribosylamine--glycine ligase [Shigella dysenteriae CDC
           74-1112]
 gi|323174482|gb|EFZ60107.1| phosphoribosylamine--glycine ligase [Escherichia coli LT-68]
 gi|323933953|gb|EGB30427.1| phosphoribosylamine-glycine ligase [Escherichia coli E1520]
 gi|323938878|gb|EGB35098.1| phosphoribosylamine-glycine ligase [Escherichia coli E482]
 gi|331036042|gb|EGI08279.1| phosphoribosylamine--glycine ligase [Escherichia coli H736]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|157692232|ref|YP_001486694.1| carbamoyl phosphate synthase large subunit [Bacillus pumilus
           SAFR-032]
 gi|157680990|gb|ABV62134.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
           [Bacillus pumilus SAFR-032]
          Length = 1071

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            VP  KG   +SV  A +    +  P+ V  S +  G
Sbjct: 678 GVPQPKGKTATSVPEAVAIANQIGYPVLVRPSYVLGG 714


>gi|149920385|ref|ZP_01908855.1| D-alanine--D-alanine ligase [Plesiocystis pacifica SIR-1]
 gi|149818827|gb|EDM78269.1| D-alanine--D-alanine ligase [Plesiocystis pacifica SIR-1]
          Length = 285

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 26/180 (14%)

Query: 16  NVPVAKGVVISSVHAAES--AIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           N+PV +  V  S   A S  A++ L  P  V+K +     RG      +   S   +   
Sbjct: 89  NLPVPRS-VALSADRAASLRALEQLGWP-AVLKPR-----RGAAGAGVMLLGSPRDLDAL 141

Query: 74  SSLKSVISDIREILGSTL--------------ITKQTGPTGSRVNCVYVEDGADILRELY 119
           +SL+  +   R +LG  +              +T++ GP GS++  V V    D +    
Sbjct: 142 ASLEPELLVERRMLGREISVVLLDGALLGMAEVTREIGPGGSKLRSVTVPPKLDPIARRG 201

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           L+ +  R +  +   A     +D+    +D    +    + P+       VA +     L
Sbjct: 202 LANVAVRAARELGLDAGPT-CVDLILSPRDNEVILEVEPLPPVH--RDSLVARVARAEGL 258


>gi|150403262|ref|YP_001330556.1| pyruvate carboxylase subunit A [Methanococcus maripaludis C7]
 gi|150034292|gb|ABR66405.1| acetyl-CoA carboxylase, biotin carboxylase [Methanococcus
           maripaludis C7]
          Length = 494

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VPV  G    I S   A      +  P+ ++K+    GG G      +  +
Sbjct: 119 AKKAMKIAGVPVLPGREEPIESEDEAIEVADEIGYPV-IIKASAGGGGIGM----NVVYN 173

Query: 66  SKGGVRVESSLKSVISDI 83
            +  V    S KS+    
Sbjct: 174 KEELVDTIQSTKSIAQSA 191


>gi|332345996|gb|AEE59330.1| phosphoribosylamine--glycine ligase PurD [Escherichia coli UMNK88]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|320200154|gb|EFW74743.1| Phosphoribosylamine--glycine ligase [Escherichia coli EC4100B]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|168239601|ref|ZP_02664659.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194734737|ref|YP_002117076.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194710239|gb|ACF89460.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197287734|gb|EDY27125.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|322616284|gb|EFY13194.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322617273|gb|EFY14175.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625955|gb|EFY22770.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626647|gb|EFY23449.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631482|gb|EFY28239.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635195|gb|EFY31913.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642600|gb|EFY39196.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646811|gb|EFY43315.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650809|gb|EFY47202.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655891|gb|EFY52192.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657290|gb|EFY53569.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665552|gb|EFY61737.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669735|gb|EFY65880.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670986|gb|EFY67118.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322679190|gb|EFY75243.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679348|gb|EFY75395.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322688115|gb|EFY84079.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195792|gb|EFZ80967.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200697|gb|EFZ85770.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202186|gb|EFZ87242.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209297|gb|EFZ94232.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211622|gb|EFZ96459.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218040|gb|EGA02753.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221329|gb|EGA05751.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225744|gb|EGA09965.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230968|gb|EGA15085.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235750|gb|EGA19832.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240064|gb|EGA24110.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242603|gb|EGA26625.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249689|gb|EGA33596.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252572|gb|EGA36413.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323256934|gb|EGA40646.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262043|gb|EGA45607.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323263951|gb|EGA47465.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323268436|gb|EGA51906.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|198241778|ref|YP_002218091.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197936294|gb|ACH73627.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326625884|gb|EGE32229.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|118469528|ref|YP_887363.1| carbamoyl phosphate synthase large subunit [Mycobacterium smegmatis
           str. MC2 155]
 gi|118170815|gb|ABK71711.1| carbamoyl-phosphate synthase, large subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 1115

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K  + +S   A      +  P+ V  S +  GGRG
Sbjct: 694 EVLTAAGLPAPKYGMATSFDQARRIAADIGYPVLVRPSYVL-GGRG 738



 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVAKVGGESARSRVCFTMDEVRETVAELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S + V     + L ++               V +E+     +E  L L+ D   
Sbjct: 186 ---MAYSAEDVERMAGDGLAASPSAN-----------VLIEESIYGWKEYELELMRDGRD 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE            + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENFDPMGVHTGDSVTVAPAMTLTDREYQKMRD 271


>gi|82546347|ref|YP_410294.1| phosphoribosylamine--glycine ligase [Shigella boydii Sb227]
 gi|81247758|gb|ABB68466.1| phosphoribosylglycinamide synthetase [Shigella boydii Sb227]
 gi|332092335|gb|EGI97410.1| phosphoribosylamine--glycine ligase [Shigella boydii 3594-74]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|70606553|ref|YP_255423.1| hypothetical protein Saci_0754 [Sulfolobus acidocaldarius DSM 639]
 gi|68567201|gb|AAY80130.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 276

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           LL K+N+   + +V  S   A    K +  P  V+K    + GR   +  +
Sbjct: 88  LLAKHNIKTPRTIVTFSKDKAVDLAKKIGFP-AVIKPIEGSWGRMVAKAVD 137


>gi|119774895|ref|YP_927635.1| acetyltransferase [Shewanella amazonensis SB2B]
 gi|119767395|gb|ABL99965.1| acetyltransferase, GNAT family [Shewanella amazonensis SB2B]
          Length = 911

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 36/174 (20%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLYG 290
           A +R   +  + D+ E  +        N     L G  +G + NG G A+  +D +   G
Sbjct: 270 AAFRRAGMLRVNDLVEMFAALESLNHGN----DLKGERLGIISNGGGPAVLAVDELISRG 325

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILIN-- 327
           G  A                     N +D+ G AD  +   A  I+        IL+   
Sbjct: 326 GKLAELSEDTCRKLDTVLPKTWSAQNPIDIIGDADAKRYVDALNILMDSDDADAILVLHS 385

Query: 328 --IFGGIMRCDVLVKGILSAVKEVKI--NIPLVMRLEGANVD-IGNRLIAESGL 376
               G     +++ + +  A+K+      + ++    G N      +   ++G+
Sbjct: 386 PSALG---ESELIAEAVADAIKKHPHRSKLNILTNWSGENSAYKARKRFTKAGV 436


>gi|300919424|ref|ZP_07135928.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 115-1]
 gi|300413517|gb|EFJ96827.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 115-1]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|296140280|ref|YP_003647523.1| carbamoyl-phosphate synthase, large subunit [Tsukamurella
           paurometabola DSM 20162]
 gi|296028414|gb|ADG79184.1| carbamoyl-phosphate synthase, large subunit [Tsukamurella
           paurometabola DSM 20162]
          Length = 1109

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 22/68 (32%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  K    ++   A      +  P+ V  S +  G   +  + E       G
Sbjct: 691 RVLTEAGLPAPKFGTATTAEGARDVAAGIGYPVLVRPSYVLGGRGMEIVYDEQALLDYIG 750

Query: 70  VRVESSLK 77
              E +  
Sbjct: 751 RATELTPD 758


>gi|218697713|ref|YP_002405380.1| phosphoribosylamine--glycine ligase [Escherichia coli 55989]
 gi|256021674|ref|ZP_05435539.1| phosphoribosylamine--glycine ligase [Shigella sp. D9]
 gi|260858115|ref|YP_003232006.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O26:H11 str. 11368]
 gi|332282917|ref|ZP_08395330.1| phosphoribosylglycinamide synthetase [Shigella sp. D9]
 gi|218354445|emb|CAV01261.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli 55989]
 gi|257756764|dbj|BAI28266.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O26:H11 str. 11368]
 gi|323155545|gb|EFZ41722.1| phosphoribosylamine--glycine ligase [Escherichia coli EPECa14]
 gi|323182105|gb|EFZ67515.1| phosphoribosylamine--glycine ligase [Escherichia coli 1357]
 gi|332105269|gb|EGJ08615.1| phosphoribosylglycinamide synthetase [Shigella sp. D9]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|194445679|ref|YP_002043423.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194404342|gb|ACF64564.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|171463874|ref|YP_001797987.1| phosphoribosylamine--glycine ligase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193412|gb|ACB44373.1| phosphoribosylamine--glycine ligase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A     S+   A + I     P+ VVK+   A G+             
Sbjct: 110 SKAFMKRHGIPTADYQTFSNALEAHAYIDAKGAPI-VVKADGLAAGK------------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  SL+   + +       L   + G  G+RV    +E+  
Sbjct: 156 -GVVVAMSLEEAHAAVD----MMLADNKLGNAGARV---VIEEFL 192


>gi|119713525|gb|ABL97578.1| phosphoribosylamine--glycine ligase [uncultured marine bacterium
           EB0_35D03]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 23/142 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L++ N+P A   V +    A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLQRNNIPTAFYKVFTETEKATNYVKEKGTPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV + S+L+   + I ++L +     + G  G   + V +E+      E    ++VD  +
Sbjct: 154 GVIIASTLQEATNAIEDMLEA----NRFGDAG---SRVIIEEFLT-GEEASFIVMVDGLN 205

Query: 129 GMVAFIASTQGGMDIEEVAKDY 150
            +    +      D E+   + 
Sbjct: 206 ILPMATSQDHKARDNEDKGPNT 227


>gi|157163474|ref|YP_001460792.1| phosphoribosylamine--glycine ligase [Escherichia coli HS]
 gi|331670860|ref|ZP_08371695.1| phosphoribosylamine--glycine ligase [Escherichia coli TA271]
 gi|157069154|gb|ABV08409.1| phosphoribosylamine--glycine ligase [Escherichia coli HS]
 gi|324115437|gb|EGC09382.1| phosphoribosylamine-glycine ligase [Escherichia coli E1167]
 gi|331061948|gb|EGI33872.1| phosphoribosylamine--glycine ligase [Escherichia coli TA271]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|193066412|ref|ZP_03047459.1| phosphoribosylamine--glycine ligase [Escherichia coli E22]
 gi|194429955|ref|ZP_03062464.1| phosphoribosylamine--glycine ligase [Escherichia coli B171]
 gi|209921485|ref|YP_002295569.1| phosphoribosylamine--glycine ligase [Escherichia coli SE11]
 gi|218556560|ref|YP_002389474.1| phosphoribosylamine--glycine ligase [Escherichia coli IAI1]
 gi|260846805|ref|YP_003224583.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O103:H2 str. 12009]
 gi|293474313|ref|ZP_06664722.1| phosphoribosylamine-glycine ligase [Escherichia coli B088]
 gi|300819817|ref|ZP_07100004.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 107-1]
 gi|192925936|gb|EDV80583.1| phosphoribosylamine--glycine ligase [Escherichia coli E22]
 gi|194411984|gb|EDX28297.1| phosphoribosylamine--glycine ligase [Escherichia coli B171]
 gi|209914744|dbj|BAG79818.1| phosphoribosylglycinamide synthase [Escherichia coli SE11]
 gi|218363329|emb|CAR00979.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli IAI1]
 gi|257761952|dbj|BAI33449.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O103:H2 str. 12009]
 gi|291321343|gb|EFE60784.1| phosphoribosylamine-glycine ligase [Escherichia coli B088]
 gi|300527638|gb|EFK48700.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 107-1]
 gi|323161302|gb|EFZ47211.1| phosphoribosylamine--glycine ligase [Escherichia coli E128010]
 gi|323943606|gb|EGB39714.1| phosphoribosylamine-glycine ligase [Escherichia coli H120]
 gi|324017341|gb|EGB86560.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 117-3]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|157156020|ref|YP_001465501.1| phosphoribosylamine--glycine ligase [Escherichia coli E24377A]
 gi|170021992|ref|YP_001726946.1| phosphoribosylamine--glycine ligase [Escherichia coli ATCC 8739]
 gi|191168670|ref|ZP_03030451.1| phosphoribosylamine--glycine ligase [Escherichia coli B7A]
 gi|300824614|ref|ZP_07104722.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 119-7]
 gi|300907559|ref|ZP_07125197.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 84-1]
 gi|300925875|ref|ZP_07141718.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 182-1]
 gi|301302182|ref|ZP_07208314.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 124-1]
 gi|307315021|ref|ZP_07594607.1| phosphoribosylamine/glycine ligase [Escherichia coli W]
 gi|309797710|ref|ZP_07692096.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 145-7]
 gi|331680129|ref|ZP_08380790.1| phosphoribosylamine--glycine ligase [Escherichia coli H591]
 gi|157078050|gb|ABV17758.1| phosphoribosylamine--glycine ligase [Escherichia coli E24377A]
 gi|169756920|gb|ACA79619.1| phosphoribosylamine--glycine ligase [Escherichia coli ATCC 8739]
 gi|190901310|gb|EDV61078.1| phosphoribosylamine--glycine ligase [Escherichia coli B7A]
 gi|300400726|gb|EFJ84264.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 84-1]
 gi|300418065|gb|EFK01376.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 182-1]
 gi|300522863|gb|EFK43932.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 119-7]
 gi|300842345|gb|EFK70105.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 124-1]
 gi|306905526|gb|EFN36059.1| phosphoribosylamine/glycine ligase [Escherichia coli W]
 gi|308118722|gb|EFO55984.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 145-7]
 gi|309704421|emb|CBJ03770.1| phosphoribosylglycineamide synthetase [Escherichia coli ETEC
           H10407]
 gi|315063331|gb|ADT77658.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli W]
 gi|315252726|gb|EFU32694.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 85-1]
 gi|323380605|gb|ADX52873.1| phosphoribosylamine/glycine ligase [Escherichia coli KO11]
 gi|331072284|gb|EGI43618.1| phosphoribosylamine--glycine ligase [Escherichia coli H591]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|331092564|ref|ZP_08341385.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400676|gb|EGG80282.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 1074

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 33/190 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +A++ K  +P+ +  +  +V  A    + +  P+ V  S +  GGRG             
Sbjct: 672 RAMMEKLEIPMPESGMAVNVEEAVEIAERIGYPVMVRPSYVL-GGRGM------------ 718

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD-RT 127
                     V+ D   + G         P       + ++   +   E     + D   
Sbjct: 719 ---------EVVYDSESMAGYMKAAVGVTPD----RPILIDRFLNHALECEADAISDGTH 765

Query: 128 SGMVAFIASTQ-GGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           + + A +   +  G+   + A   P K I +  I  +   T      + + + ++G   +
Sbjct: 766 AFVPAVMEHIELAGVHSGDSACIIPSKHISEENIKTIKEYT----RKIAEEMHVKGLMNM 821

Query: 186 DGGDLFPNLY 195
                   +Y
Sbjct: 822 QYAIENGKVY 831



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 28/128 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +    L  P+                 +        G  +  +
Sbjct: 140 GIEMARSEVAYSVDEALAIADKLGYPVV---------------LRPAYTMGGAGGGLVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            + + +     L ++L           V  V VE+      EL L ++  R S       
Sbjct: 185 KEELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDSEGNMITV 231

Query: 136 STQGGMDI 143
                +D 
Sbjct: 232 CFIENIDP 239


>gi|311696119|gb|ADP98992.1| phosphoribosylamine-glycine ligase [marine bacterium HP15]
          Length = 428

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAGYGNFTDVDEALAYVRQQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV V  +L+     IR++L         G  G   + V +E+  +
Sbjct: 154 GVIVAMTLEEAEDAIRDMLA----GNAFGDAG---SRVVIEEFLE 191


>gi|331655706|ref|ZP_08356696.1| phosphoribosylamine--glycine ligase [Escherichia coli M718]
 gi|331046631|gb|EGI18718.1| phosphoribosylamine--glycine ligase [Escherichia coli M718]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|301325714|ref|ZP_07219173.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 78-1]
 gi|300847503|gb|EFK75263.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 78-1]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|261403456|ref|YP_003247680.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Methanocaldococcus vulcanius M7]
 gi|261370449|gb|ACX73198.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
           [Methanocaldococcus vulcanius M7]
          Length = 618

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL+K N+P A+G    +   A    K +  P+ V  S +  G
Sbjct: 209 KLLKKLNIPQAEGGTAFTKEEALKIAKRIGYPVLVRPSYVLGG 251


>gi|253579481|ref|ZP_04856750.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848982|gb|EES76943.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 424

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A          A   ++T      V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFDDPEKALEYLRTEARFPIVLKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +   LK     ++EI    +  K+ G  G   N + +E+         +S+L    
Sbjct: 153 -GVLICKDLKEAEDGVKEI----MEDKKFGNAG---NTMVIEEFMTGRE---VSVLSFVD 201

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 202 GKTIRTMTSAQD 213


>gi|227827760|ref|YP_002829540.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.14.25]
 gi|229585031|ref|YP_002843533.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.27]
 gi|238619932|ref|YP_002914758.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.4]
 gi|227459556|gb|ACP38242.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.14.25]
 gi|228020081|gb|ACP55488.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.27]
 gi|238381002|gb|ACR42090.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.4]
 gi|323474828|gb|ADX85434.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus REY15A]
 gi|323477568|gb|ADX82806.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus HVE10/4]
          Length = 282

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            L R   +P+   ++ +S  AA  A + +  P+ + K  I + GR
Sbjct: 93  KLFR-NGIPIPDSIIAASPDAAMKAYEQMGFPV-IDKPPIGSWGR 135


>gi|227830470|ref|YP_002832250.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.S.2.15]
 gi|284997964|ref|YP_003419731.1| Lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.D.8.5]
 gi|227456918|gb|ACP35605.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.S.2.15]
 gi|284445859|gb|ADB87361.1| Lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.D.8.5]
          Length = 282

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            L R   +P+   ++ +S  AA  A + +  P+ + K  I + GR
Sbjct: 93  KLFR-NGIPIPDSIIAASPDAAMKAYEQMGFPV-IDKPPIGSWGR 135


>gi|209524910|ref|ZP_03273455.1| phosphoribosylamine/glycine ligase [Arthrospira maxima CS-328]
 gi|209494559|gb|EDZ94869.1| phosphoribosylamine/glycine ligase [Arthrospira maxima CS-328]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 68/223 (30%), Gaps = 40/223 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+    VP A G V +   AA+  I  +P    V+K+   A G+             
Sbjct: 108 AKDLMLAAGVPTATGAVFTDPQAAKDYITQVP---IVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +SL+   S I  I                   + +E+     +E+ +  + D  
Sbjct: 152 -GVIVATSLEMADSAITSISQGEFGQDNC--------QIVIEEFLQ-GQEVSVLAITDGK 201

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
           +      A     +   +   +              G+ +     L     +    R   
Sbjct: 202 TIRPLIPAQDHKPIGEGDTGPNT------------GGMGAYAPTPLVSDTLMVKIQREVL 249

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                 L     D    +     L+I  +G L VL+    F D
Sbjct: 250 EPTLQELQNRGIDYCGIIY--AGLMITPDGDLMVLEFNCRFGD 290


>gi|167040420|ref|YP_001663405.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X514]
 gi|300913706|ref|ZP_07131023.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X561]
 gi|307723279|ref|YP_003903030.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X513]
 gi|166854660|gb|ABY93069.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X514]
 gi|300890391|gb|EFK85536.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X561]
 gi|307580340|gb|ADN53739.1| D-alanine--D-alanine ligase [Thermoanaerobacter sp. X513]
          Length = 325

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 65/225 (28%), Gaps = 36/225 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++  + +P  K V+  +     S    L  PL+V        GRG     E       
Sbjct: 105 KDIVASHGLPTPKYVIAENPQEIPSV-DHLKFPLFV----KPISGRGSAGIDEEN----- 154

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +      +   + +I      T++ G          +E+  +  +E+ + ++  +  
Sbjct: 155 ---IIYDKDKLPQVVSKI------TEKIG------QAALIEEFIE-GKEVTVGIIGYKHP 198

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQ-KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            ++  +      +            +I K  I+       ++V        L     ++ 
Sbjct: 199 QVLPLLEVGYNNVKTNTYEHKMFDNEIIKCPIEV-----PKEVEEKIKETALNIYKVLNA 253

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLI----IMKNGRLRVLDSKISF 228
            D          D     LE+N           G   V    + +
Sbjct: 254 KDFARIDMILSKDNVPYFLELNTFAGLTMSSSKGEKHVHHGYMGY 298


>gi|74314499|ref|YP_312918.1| phosphoribosylamine--glycine ligase [Shigella sonnei Ss046]
 gi|73857976|gb|AAZ90683.1| phosphoribosylglycinamide synthetase [Shigella sonnei Ss046]
 gi|323167476|gb|EFZ53184.1| phosphoribosylamine--glycine ligase [Shigella sonnei 53G]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|6730014|pdb|1GSO|A Chain A, Glycinamide Ribonucleotide Synthetase (Gar-Syn) From E.
           Coli
          Length = 431

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 111 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 155

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 156 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 207

Query: 129 GMVA 132
            +  
Sbjct: 208 VLPM 211


>gi|330873884|gb|EGH08033.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 377

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 54  KDFLARHKIPTADYQNFTEIEPALAYLREEGAPI-VIKADGLAAGK-------------- 98

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 99  GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 150

Query: 129 GMVA 132
            +  
Sbjct: 151 VLPM 154


>gi|320185955|gb|EFW60703.1| Phosphoribosylamine--glycine ligase [Shigella flexneri CDC 796-83]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|317502339|ref|ZP_07960508.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089946|ref|ZP_08338837.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896295|gb|EFV18397.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330403084|gb|EGG82647.1| carbamoyl-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 1075

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 37/194 (19%)

Query: 9   KALLRKYN----VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R+      +P+ +  +  +V  A    + +  P+ V  S +  GGRG         
Sbjct: 668 RDLFREMMDKLEIPMPESGMAVTVDDALEIAEKIGYPVMVRPSYVL-GGRGM-------- 718

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                         V+ D   ++G         P       + ++       E     + 
Sbjct: 719 -------------EVVYDAESMVGYMKAAVGVTPD----RPILIDRFLGHATECEADAIS 761

Query: 125 D-RTSGMVAFIASTQ-GGMDIEEVAKDYPQK-IFKLLIDPLIGVTSEDVASLCDMLELQG 181
           D   + + A +   +  G+   + A   P K I +  +  +   T      + + + ++G
Sbjct: 762 DGTHAFVPAVMEHIELAGVHSGDSACIIPSKNISEENVKTIKEYT----RKIAEEMHVKG 817

Query: 182 QARIDGGDLFPNLY 195
              +        +Y
Sbjct: 818 LMNMQYAIENGKVY 831



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 28/128 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +  + L  P+                 +        G  +  +
Sbjct: 140 GIEMARSEVAYSVDEALAIAEKLGYPVV---------------LRPAYTMGGAGGGLVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           +  + +     L ++L           V  V VE+      EL L ++  R +       
Sbjct: 185 VDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDAEGNMITV 231

Query: 136 STQGGMDI 143
                +D 
Sbjct: 232 CFIENIDP 239


>gi|307309357|ref|ZP_07589020.1| phosphoribosylamine/glycine ligase [Sinorhizobium meliloti BL225C]
 gi|306900226|gb|EFN30844.1| phosphoribosylamine/glycine ligase [Sinorhizobium meliloti BL225C]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 15/78 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y +P       +    A++ I+    P+ V+K+   A G+              
Sbjct: 107 KDLCARYGIPTGAYRRFTDAEPAKAYIREEGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREI 86
           GV V  SL    + + E 
Sbjct: 152 GVTVAMSLDEAFAAVDEC 169


>gi|260886369|ref|ZP_05897632.1| phosphoribosylamine--glycine ligase [Selenomonas sputigena ATCC
           35185]
 gi|330838860|ref|YP_004413440.1| phosphoribosylamine/glycine ligase [Selenomonas sputigena ATCC
           35185]
 gi|260863890|gb|EEX78390.1| phosphoribosylamine--glycine ligase [Selenomonas sputigena ATCC
           35185]
 gi|329746624|gb|AEB99980.1| phosphoribosylamine/glycine ligase [Selenomonas sputigena ATCC
           35185]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P AK  V S   AA + +K    P+ V+K+   A G+             
Sbjct: 107 SKDLMKKYGIPTAKYEVFSDAAAARAYVKAEGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  + +  ++ + EI+       + G  G+  + V +E+  
Sbjct: 153 -GVVVAMTEEEALAAVDEIM-------EGGAFGAAGSRVVIEEFM 189


>gi|260870716|ref|YP_003237118.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O111:H- str. 11128]
 gi|257767072|dbj|BAI38567.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli O111:H- str. 11128]
 gi|323177561|gb|EFZ63146.1| phosphoribosylamine--glycine ligase [Escherichia coli 1180]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|225873624|ref|YP_002755083.1| phosphoribosylamine--glycine ligase [Acidobacterium capsulatum ATCC
           51196]
 gi|225794509|gb|ACO34599.1| phosphoribosylamine--glycine ligase [Acidobacterium capsulatum ATCC
           51196]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 42/181 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++ +P A   V  +          L     V+K+   A G+             
Sbjct: 106 AKRFMQRHQIPTAHFAVC-TAEQQALDSLDLFHLPVVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL-GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV +  S     + I  +  G  L T +T         + VE+      E+   +L D 
Sbjct: 152 -GVLICESKAEAKAAITGLFSGKLLGTVET--------SIVVEEFLT-GEEISFLVLSDG 201

Query: 127 TSGMVAFIASTQ------------GGMDI----EEVAKDYPQKIFKLLIDP-LIGVTSED 169
                   A               GGM +    E + +   + I   ++ P L G+ +ED
Sbjct: 202 KHASPLVPAQDHKRIGEGDTGLNTGGMGVYSTDEMIDEQMREWIMHRIVQPTLDGMAAED 261

Query: 170 V 170
            
Sbjct: 262 A 262


>gi|289207363|ref|YP_003459429.1| phosphoribosylamine/glycine ligase [Thioalkalivibrio sp. K90mix]
 gi|288942994|gb|ADC70693.1| phosphoribosylamine/glycine ligase [Thioalkalivibrio sp. K90mix]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++ +P A         AA   I+    P+ VVK+   A G+             
Sbjct: 108 AKDFMQRHGIPTAAYGSFEDESAALDFIRAHGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +     + +R++L         G  G RV    +E+        ++ ++
Sbjct: 154 -GVILAQTEDEACAAVRDMLA----GNAFGEAGHRV---VIEEFLRGEEASFICMV 201


>gi|119494803|ref|XP_001264206.1| urea amidolyase, putative [Neosartorya fischeri NRRL 181]
 gi|119412368|gb|EAW22309.1| urea amidolyase, putative [Neosartorya fischeri NRRL 181]
          Length = 1237

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+ L  K  VP+  G   +I +   A    + L  P+ ++K+    GG G
Sbjct: 120 ARELATKAGVPIVPGSPGLIDNEDDAVEVAQKLGYPV-MLKATAGGGGMG 168


>gi|254540162|ref|NP_659093.2| propionyl-CoA carboxylase alpha chain, mitochondrial precursor [Mus
           musculus]
 gi|66773933|sp|Q91ZA3|PCCA_MOUSE RecName: Full=Propionyl-CoA carboxylase alpha chain, mitochondrial;
           Short=PCCase subunit alpha; AltName:
           Full=Propanoyl-CoA:carbon dioxide ligase subunit alpha;
           Flags: Precursor
 gi|29612536|gb|AAH49802.1| Propionyl-Coenzyme A carboxylase, alpha polypeptide [Mus musculus]
 gi|74195066|dbj|BAE28281.1| unnamed protein product [Mus musculus]
 gi|148668301|gb|EDL00631.1| propionyl-Coenzyme A carboxylase, alpha polypeptide, isoform CRA_b
           [Mus musculus]
          Length = 724

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G   V+     A    + +  P+ +  S                 
Sbjct: 175 ESKLLAKRAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 219

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 220 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 272

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +DP       E   +L   ++     
Sbjct: 273 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDPETRQAMGEQAVALAKAVKYSSAG 329

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 330 TVEFLVDSQKNFY--FLEMNTRLQVEHPVTECITG 362


>gi|315929563|gb|EFV08752.1| Carbamoyl-phosphate synthase large subunit [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 990

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + + K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLPKSMYAYNYDEALKAVDEIDFPLMIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ DR  
Sbjct: 176 GSGVVYNMDEFKELTNTALALS-----------PIHEILIEESLLGWKEYEMEVIRDRAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + I P + +T     V       
Sbjct: 225 NCIIV-------CSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFA 268



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 50/208 (24%)

Query: 12  LRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
             ++     +   K    +SV  A      +  P+ V  S +  G               
Sbjct: 679 FAEFITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGG--------------- 723

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             +RV +    +   ++E     +      P       V ++   D   E+ +  + D  
Sbjct: 724 RAMRVVNDEAELRLYMQE----AVDVSDKSP-------VLIDQFLDNATEIDVDAICDGK 772

Query: 128 SGMVAFIASTQGGMD-IEEVAKDYPQKIFKL-LIDPLIGVTSEDV---ASLCDMLELQGQ 182
                ++A   G M+ IEE           L   +    +        A +   L + G 
Sbjct: 773 D---VYVA---GIMEHIEEAGIHSGDSACSLPPCNIDEKMQEFIAQKTADIALNLGVVGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINP 210
             I           A  + ++ ++E+NP
Sbjct: 827 LNIQF---------ALHNNELYMIEVNP 845


>gi|299756110|ref|XP_001829102.2| bifunctional purine biosynthetic protein ADE1 [Coprinopsis cinerea
           okayama7#130]
 gi|298411526|gb|EAU92737.2| bifunctional purine biosynthetic protein ADE1 [Coprinopsis cinerea
           okayama7#130]
          Length = 785

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 24/105 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLP--GPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  + ++N+P A+  V  +    ++AI  +   G   V+K+   A G+           
Sbjct: 116 SKDFMARHNIPTAQFRVFKAP-ELDAAINYINTCGHSVVLKASGLAAGK----------- 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
              GV +  + +  I+ ++EIL    +    G  G   N V +E+
Sbjct: 164 ---GVLIPETKEEAIAGLKEIL----VDGVFGDAG---NEVVIEE 198


>gi|218551011|ref|YP_002384802.1| phosphoribosylamine--glycine ligase [Escherichia fergusonii ATCC
           35469]
 gi|218358552|emb|CAQ91200.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia fergusonii ATCC 35469]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|189219739|ref|YP_001940380.1| phosphoribosylamine-glycine ligase [Methylacidiphilum infernorum
           V4]
 gi|189186597|gb|ACD83782.1| Phosphoribosylamine-glycine ligase [Methylacidiphilum infernorum
           V4]
          Length = 430

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L  Y +P A G +  +   A S  K+   P  V+K+   A G+             
Sbjct: 108 AKEFLVHYKIPTASGHIFDNPLDALSFSKSFKFPQ-VIKADGLASGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +          IR++    L     G  G     + +E+  +   E+ L LL+D  
Sbjct: 154 -GVLIAFDSSQAEQAIRKLKDQKLF----GAAGK---KILIEEFLE-GVEMSLFLLLDGK 204

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
           S     +A+      IE+  K
Sbjct: 205 SYK--ILAAVHDYKKIEDSNK 223


>gi|200388238|ref|ZP_03214850.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199605336|gb|EDZ03881.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|168467893|ref|ZP_02701730.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197264018|ref|ZP_03164092.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|238913753|ref|ZP_04657590.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|195629008|gb|EDX48400.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197242273|gb|EDY24893.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|56416001|ref|YP_153076.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197364928|ref|YP_002144565.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205354423|ref|YP_002228224.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859353|ref|YP_002246004.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|56130258|gb|AAV79764.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197096405|emb|CAR62010.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205274204|emb|CAR39222.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206711156|emb|CAR35530.1| phosphoribosylglycineamide synthetase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326629555|gb|EGE35898.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|13905236|gb|AAH06915.1| Propionyl-Coenzyme A carboxylase, alpha polypeptide [Mus musculus]
          Length = 724

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G   V+     A    + +  P+ +  S                 
Sbjct: 175 ESKLLAKRAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 219

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 220 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 272

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +DP       E   +L   ++     
Sbjct: 273 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDPETRQAMGEQAVALAKAVKYSSAG 329

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 330 TVEFLVDSQKNFY--FLEMNTRLQVEHPVTECITG 362


>gi|322374565|ref|ZP_08049079.1| hypothetical protein HMPREF0849_00280 [Streptococcus sp. C300]
 gi|321280065|gb|EFX57104.1| hypothetical protein HMPREF0849_00280 [Streptococcus sp. C300]
          Length = 183

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL 42
           K L +K +VPV  G VI +    + A+K +  P+
Sbjct: 117 KKLFKKADVPVVPGAVIQTEADVDKAVKEIGLPM 150


>gi|300870175|ref|YP_003785046.1| L-lactate dehydrogenase [Brachyspira pilosicoli 95/1000]
 gi|300687874|gb|ADK30545.1| L-lactate dehydrogenase [Brachyspira pilosicoli 95/1000]
          Length = 717

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 57/180 (31%), Gaps = 45/180 (25%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +   +K NVP      + +   A  A + L  P+ V+K   + G R              
Sbjct: 112 RERFKKNNVPQPNFFPVWNYDEAVEAYRNLTKPV-VIKPADNMGAR-------------- 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD----------ILREL 118
           GV   S  K V       L +    K   P+G     V +E+  +             E+
Sbjct: 157 GVMKVSDEKDV-------LNAFNRAKSASPSGE----VIIEEFMEGPELSIDMLIYNDEI 205

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y++ + DR      F           E     P  + +  ID  I V    + +L   + 
Sbjct: 206 YVTGVADRIIEYPPFFI---------ETGHILPSALEQEKIDDAINVMKAGIKALNLKIG 256


>gi|296127751|ref|YP_003635003.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Brachyspira murdochii DSM 12563]
 gi|296019567|gb|ADG72804.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Brachyspira murdochii DSM 12563]
          Length = 723

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 57/180 (31%), Gaps = 45/180 (25%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +   +K NVP      + +   A  A + L  P+ VVK   + G R              
Sbjct: 112 RERFKKNNVPQPNFFPVWNYDEAIDAYRHLNTPV-VVKPADNMGAR-------------- 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD----------ILREL 118
           GV   S+   +++            K   P+G     V +E+  D             E+
Sbjct: 157 GVMKVSNENDILAAFNR-------AKSASPSGE----VIIEEFMDGPELSIDMLIYNDEI 205

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           Y++ + DR      F           E     P  + K  +D  + V    + +L   + 
Sbjct: 206 YVTGVADRIIEFPPFFI---------ETGHIMPSALEKEKLDDAVNVMKAGIKALNLKIG 256


>gi|168245131|ref|ZP_02670063.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194450383|ref|YP_002048160.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194408687|gb|ACF68906.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205336121|gb|EDZ22885.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|126696383|ref|YP_001091269.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9301]
 gi|126543426|gb|ABO17668.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9301]
          Length = 1098

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K NV V    + S++  A    + +     +++     GG G G           
Sbjct: 133 KESMEKINVNVCPSGIASNLDEAIEVSRKICSYPLIIRPAFTLGGVGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +L+  +   +           +G   S  N + +E      +E  L ++ D  +
Sbjct: 182 ---IAFNLEEFVELCK-----------SGLEESPSNQILIEKSLIGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE +          + + P   +T ++   L D
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRD 267


>gi|27379532|ref|NP_771061.1| 3-methylcrotonyl-CoA carboxylase subunit alpha [Bradyrhizobium
           japonicum USDA 110]
 gi|27352684|dbj|BAC49686.1| 3-methylcrotonyl-CoA carboxylase alpha subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 687

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA--ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +KAL+ K  VP+  G    +   A    A   +  P+ V K+    GGRG    +     
Sbjct: 143 SKALMEKAGVPLVPGYHGEAQDEATLAKAANQIGFPILV-KASAGGGGRGMRIVRSAAEL 201

Query: 66  SKGGVRVESSLKSVISDIREILGSTL 91
               V  +   K+   D R ++   +
Sbjct: 202 GPAIVSAKREAKAAFGDDRMLIEKYV 227


>gi|254818276|ref|ZP_05223277.1| carbamoyl phosphate synthase large subunit [Mycobacterium
           intracellulare ATCC 13950]
          Length = 1121

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DVLTAAGLPAPKYGTATTFDQARRIAEDIGYPVLVRPSYVL-GGRG 738



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      ++ L  P+ V         R       L +    
Sbjct: 138 KDIVAKVGGESARSRVCFTMEEVRETVEELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S++ V      + G+ L    +         V +E+     +E  L L+ D   
Sbjct: 186 ---MARSVEEV----DRMAGAGLAESPSAN-------VLIEESIYGWKEFELELMRDGND 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE            + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENFDPMGVHTGDSVTVAPAMTLTDREYQRMRD 271


>gi|49475570|ref|YP_033611.1| acetyl-CoA carboxylase biotin carboxylase subunit [Bartonella
           henselae str. Houston-1]
 gi|49238377|emb|CAF27604.1| Biotin carboxylase [Bartonella henselae str. Houston-1]
          Length = 452

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK   +K  +PV  G    I+    A      +  P+ ++K+    GGRG    K + +
Sbjct: 118 EAKKTAKKLGIPVVPGSDGAITEEAEALRIAHEIGYPV-IIKASAGGGGRGM---KVVRS 173

Query: 65  DSKGGVRVESSLKSVISD 82
           + +  + +E++     + 
Sbjct: 174 EQEFAIALETTRSEAAAA 191


>gi|194439792|ref|ZP_03071859.1| phosphoribosylamine--glycine ligase [Escherichia coli 101-1]
 gi|253775365|ref|YP_003038196.1| phosphoribosylamine--glycine ligase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163947|ref|YP_003047055.1| phosphoribosylamine--glycine ligase [Escherichia coli B str.
           REL606]
 gi|297520394|ref|ZP_06938780.1| phosphoribosylamine--glycine ligase [Escherichia coli OP50]
 gi|300928825|ref|ZP_07144333.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 187-1]
 gi|194421289|gb|EDX37309.1| phosphoribosylamine--glycine ligase [Escherichia coli 101-1]
 gi|242379536|emb|CAQ34352.1| phosphoribosylamine-glycine ligase [Escherichia coli BL21(DE3)]
 gi|253326409|gb|ACT31011.1| phosphoribosylamine/glycine ligase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975848|gb|ACT41519.1| phosphoribosylamine-glycine ligase [Escherichia coli B str. REL606]
 gi|253980004|gb|ACT45674.1| phosphoribosylamine-glycine ligase [Escherichia coli BL21(DE3)]
 gi|300463206|gb|EFK26699.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 187-1]
 gi|323958932|gb|EGB54607.1| phosphoribosylamine-glycine ligase [Escherichia coli H489]
 gi|323969079|gb|EGB64387.1| phosphoribosylamine-glycine ligase [Escherichia coli TA007]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|312197096|ref|YP_004017157.1| carbamoyl-phosphate synthase L chain ATP-binding protein [Frankia
           sp. EuI1c]
 gi|311228432|gb|ADP81287.1| Carbamoyl-phosphate synthase L chain ATP-binding protein [Frankia
           sp. EuI1c]
          Length = 682

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 38/123 (30%), Gaps = 15/123 (12%)

Query: 8   AKALLRKYNVPVAKGVVISS-----VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           AK L+    VPV  G+V+         A   A   L  PL V K+    GGRG    +  
Sbjct: 121 AKDLMAAAGVPVLPGLVVDEALAADADALVRAAADLEFPLLV-KAVYGGGGRGMRIVRTG 179

Query: 63  PADSKGGVRVESSLKSV-------ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
           P  ++          S        +    E      +       GS V+    E    I 
Sbjct: 180 PELAEAVTGARREAASAFGDGAVFLEHYVERPRHIEVQVLADTHGSVVH--LFERECSIQ 237

Query: 116 REL 118
           R  
Sbjct: 238 RRF 240


>gi|255075411|ref|XP_002501380.1| carbamoyl-phosphate synthase [Micromonas sp. RCC299]
 gi|226516644|gb|ACO62638.1| carbamoyl-phosphate synthase [Micromonas sp. RCC299]
          Length = 1078

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +        ++   A      +     +++     GG G G           
Sbjct: 123 KEAMEKIGLKTPPSGTANNWDEAVEIADYIGSFPLIIRPAFTLGGSGGG----------- 171

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +++   + +   L ++  T            V +E      +E  L ++ D  +
Sbjct: 172 ---IAYNMEEFKTIVTSGLNASTTT-----------QVLIEKSLLGWKEYELEVMRD-LA 216

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + I P   +T ++   L D 
Sbjct: 217 DNVVIVCS------IENLDPMGVHTGDSITIAPAQTLTDKEYQRLRDA 258


>gi|168264569|ref|ZP_02686542.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205346981|gb|EDZ33612.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|187929468|ref|YP_001899955.1| phosphoribosylamine--glycine ligase [Ralstonia pickettii 12J]
 gi|309781757|ref|ZP_07676490.1| phosphoribosylamine--glycine ligase [Ralstonia sp. 5_7_47FAA]
 gi|187726358|gb|ACD27523.1| phosphoribosylamine/glycine ligase [Ralstonia pickettii 12J]
 gi|308919398|gb|EFP65062.1| phosphoribosylamine--glycine ligase [Ralstonia sp. 5_7_47FAA]
          Length = 422

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P AK    S    A + +     P+ VVK+   A G+             
Sbjct: 106 AKAFMHRHGIPTAKYQTFSDAAQAHAYVDQEGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +   S     +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMTAEEAHSA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
           +  V  +A++Q 
Sbjct: 203 N--VVALATSQD 212


>gi|121610715|ref|YP_998522.1| urea amidolyase-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121555355|gb|ABM59504.1| urea amidolyase related protein [Verminephrobacter eiseniae EF01-2]
          Length = 1228

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 19/115 (16%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +QA+AL + + VP+  G  +++ +  A +  + +  P+                 K    
Sbjct: 122 HQARALAQAHGVPLLPGTGLLADLAEAVAQARRIGYPVM---------------LKSSAG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
               G+R+      + +    +  + L        G  +   +VE    I  +L+
Sbjct: 167 GGGIGMRLVRDAGELAAAFEAV--AHLARAHFNDAGLFLEK-FVEPARHIEVQLF 218


>gi|93102415|ref|NP_034386.2| trifunctional purine biosynthetic protein adenosine-3 [Mus
           musculus]
 gi|47125526|gb|AAH70465.1| Phosphoribosylglycinamide formyltransferase [Mus musculus]
 gi|74214286|dbj|BAE40386.1| unnamed protein product [Mus musculus]
 gi|74219971|dbj|BAE40565.1| unnamed protein product [Mus musculus]
 gi|74222965|dbj|BAE40629.1| unnamed protein product [Mus musculus]
 gi|74223087|dbj|BAE40683.1| unnamed protein product [Mus musculus]
 gi|74223110|dbj|BAE40694.1| unnamed protein product [Mus musculus]
 gi|148671872|gb|EDL03819.1| phosphoribosylglycinamide formyltransferase, isoform CRA_a [Mus
           musculus]
          Length = 1010

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|403493|gb|AAA19013.1| glycinamide ribonucleotide synthetase [Mus musculus]
          Length = 1010

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|54025589|ref|YP_119831.1| carbamoyl phosphate synthase large subunit [Nocardia farcinica IFM
           10152]
 gi|54017097|dbj|BAD58467.1| putative carbamoyl-phosphate synthase large subunit [Nocardia
           farcinica IFM 10152]
          Length = 1110

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++V  A+     +  P+ V  S +  GGRG
Sbjct: 694 DVLVAAGLPAPKYGTATTVEQAKKIAAGIGYPVLVRPSYVL-GGRG 738


>gi|53725436|ref|YP_103481.1| phosphoribosylamine--glycine ligase [Burkholderia mallei ATCC
           23344]
 gi|67640602|ref|ZP_00439402.1| phosphoribosylamine--glycine ligase [Burkholderia mallei GB8 horse
           4]
 gi|121600230|ref|YP_992414.1| phosphoribosylamine--glycine ligase [Burkholderia mallei SAVP1]
 gi|126450486|ref|YP_001079932.1| phosphoribosylamine--glycine ligase [Burkholderia mallei NCTC
           10247]
 gi|167000924|ref|ZP_02266725.1| phosphoribosylamine--glycine ligase [Burkholderia mallei PRL-20]
 gi|254175621|ref|ZP_04882281.1| phosphoribosylamine--glycine ligase [Burkholderia mallei ATCC
           10399]
 gi|254202163|ref|ZP_04908526.1| phosphoribosylamine--glycine ligase [Burkholderia mallei FMH]
 gi|254207490|ref|ZP_04913840.1| phosphoribosylamine--glycine ligase [Burkholderia mallei JHU]
 gi|254359908|ref|ZP_04976178.1| phosphoribosylamine--glycine ligase [Burkholderia mallei
           2002721280]
 gi|52428859|gb|AAU49452.1| phosphoribosylamine--glycine ligase [Burkholderia mallei ATCC
           23344]
 gi|121229040|gb|ABM51558.1| phosphoribosylamine--glycine ligase [Burkholderia mallei SAVP1]
 gi|126243356|gb|ABO06449.1| phosphoribosylamine--glycine ligase [Burkholderia mallei NCTC
           10247]
 gi|147746410|gb|EDK53487.1| phosphoribosylamine--glycine ligase [Burkholderia mallei FMH]
 gi|147751384|gb|EDK58451.1| phosphoribosylamine--glycine ligase [Burkholderia mallei JHU]
 gi|148029148|gb|EDK87053.1| phosphoribosylamine--glycine ligase [Burkholderia mallei
           2002721280]
 gi|160696665|gb|EDP86635.1| phosphoribosylamine--glycine ligase [Burkholderia mallei ATCC
           10399]
 gi|238521355|gb|EEP84807.1| phosphoribosylamine--glycine ligase [Burkholderia mallei GB8 horse
           4]
 gi|243063227|gb|EES45413.1| phosphoribosylamine--glycine ligase [Burkholderia mallei PRL-20]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYVDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|332557545|ref|ZP_08411867.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides WS8N]
 gi|332275257|gb|EGJ20572.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides WS8N]
          Length = 294

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           AK +     +PV + V+  +        + L  P YVVK 
Sbjct: 94  AKEVFAAAGLPVTQSVLA-TPEEVR--ARHLLPPPYVVKP 130


>gi|218707624|ref|YP_002415143.1| phosphoribosylamine--glycine ligase [Escherichia coli UMN026]
 gi|293407622|ref|ZP_06651540.1| phosphoribosylamine-glycine ligase [Escherichia coli FVEC1412]
 gi|298383370|ref|ZP_06992962.1| phosphoribosylamine-glycine ligase [Escherichia coli FVEC1302]
 gi|300897580|ref|ZP_07115989.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 198-1]
 gi|331665662|ref|ZP_08366558.1| phosphoribosylamine--glycine ligase [Escherichia coli TA143]
 gi|218434721|emb|CAR15653.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli UMN026]
 gi|291425390|gb|EFE98430.1| phosphoribosylamine-glycine ligase [Escherichia coli FVEC1412]
 gi|298276249|gb|EFI17770.1| phosphoribosylamine-glycine ligase [Escherichia coli FVEC1302]
 gi|300358656|gb|EFJ74526.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 198-1]
 gi|331057180|gb|EGI29172.1| phosphoribosylamine--glycine ligase [Escherichia coli TA143]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTQEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|149050264|gb|EDM02588.1| rCG36968, isoform CRA_c [Rattus norvegicus]
          Length = 698

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G   V+     A    + +  P+ +  S                 
Sbjct: 174 ESKLLAKRAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 218

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 219 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 271

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +DP       E   +L   ++     
Sbjct: 272 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDPETRRAMGEQAVALAKAVKYSSAG 328

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 329 TVEFLVDSQKNFY--FLEMNTRLQVEHPVTECITG 361


>gi|145628186|ref|ZP_01783987.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae
           22.1-21]
 gi|144979961|gb|EDJ89620.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae
           22.1-21]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A   ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALVYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|126174324|ref|YP_001050473.1| CoA-binding domain-containing protein [Shewanella baltica OS155]
 gi|125997529|gb|ABN61604.1| CoA-binding domain protein [Shewanella baltica OS155]
          Length = 905

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLYG 290
           A +R   I  + D+ E  +        N     L G  +G + NG G A+  +D + + G
Sbjct: 274 AAFRRAGILRVNDLIELFAAVESLAHSN----PLQGERLGIISNGGGPAVLAVDELIMRG 329

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G  A                     N +D+ G A+  + A A  I+   + +  IL+
Sbjct: 330 GKLAELSDDTIAKLEAVLPNTWSRQNPIDIIGDANASRYAKALTILMDSNELDAILV 386


>gi|328949113|ref|YP_004366450.1| phosphoribosylamine--glycine ligase [Treponema succinifaciens DSM
           2489]
 gi|328449437|gb|AEB15153.1| Phosphoribosylamine--glycine ligase [Treponema succinifaciens DSM
           2489]
          Length = 450

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + KYNV  AK    +S   A   IK    P+ VVK+   A G+             
Sbjct: 115 AKGFMHKYNVACAKSKTFTSKEEALIYIKEQGAPI-VVKADGLAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V  +L+   + + +++  ++     G  G     + +E+
Sbjct: 161 -GVVVAKTLEEAENAVEQLMDGSI----AGEAGK---KLVIEE 195


>gi|326692767|ref|ZP_08229772.1| carbamoyl-phosphate synthase large subunit [Leuconostoc argentinum
           KCTC 3773]
          Length = 1059

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 41/213 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + N P+ +  + +++  A +   T   P+ V               +        
Sbjct: 133 KDLMERLNEPIPESTIATTLEQALAFADTHGYPVIV---------------RPAYTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  + ++   ++                G   S V  V +E      +E+   ++ D  S
Sbjct: 178 GGGIATTHDELVEIAAN-----------GLELSPVTQVLIERSIAGYKEIEFEVMRD-AS 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                +AS +   + + V       I    +    D  + +  +    +   L+++G   
Sbjct: 226 DNALVVASME---NFDPVGIHTGDSIVTAPVQTLSDREVQMMRDSALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I    L P  YK +       +E+NP +   + 
Sbjct: 283 IQMA-LDPKSYKYYI------IEVNPRVSRSSA 308


>gi|309388428|gb|ADO76308.1| phosphoribosylamine--glycine ligase [Halanaerobium praevalens DSM
           2228]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L++KY +P A+         A + I+    P+ VVK+   A G+             
Sbjct: 106 AKNLMQKYQIPTAEYKSFKEAEKAAAYIREKGAPI-VVKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +    +  ++ I    +  ++ G  G     V +E+      E  +    D  
Sbjct: 152 -GVIVAQTEAEALKAVKTI----MKDEKFGKAG---EKVVIEEFLS-GEEATILAFCDGQ 202

Query: 128 SGMVAF 133
           + +   
Sbjct: 203 TIIPML 208


>gi|282855665|ref|ZP_06264976.1| carbamoyl-phosphate synthase, large subunit [Pyramidobacter
           piscolens W5455]
 gi|282586513|gb|EFB91770.1| carbamoyl-phosphate synthase, large subunit [Pyramidobacter
           piscolens W5455]
          Length = 1364

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 59/217 (27%), Gaps = 34/217 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L K   PV    + + V  A +    +  P+ +         R              
Sbjct: 133 KDMLEKIGEPVIPSAIATRVDEAMNFGAKIGYPVII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +   +    R            G   S V  + VE      +E+   ++ D   
Sbjct: 181 ---IAHNAAEMEQLARR-----------GLEVSPVGQILVERSVAGWKEIEFEMMRDGDD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQAR 184
             +A I S +   +++ V       I         D    +       +   LE+QG   
Sbjct: 227 NCIA-ICSME---NLDPVGVHTGDSIVVAPALTLADKEYQLLRSAALRIVRELEVQGGCN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           +       N   A  + +  +   + L     G    
Sbjct: 283 VQFALNPDNFEYAVIEVNPRVSRSSALASKATGYPIA 319



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 22/110 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+L +  +   +G  + ++  A  A + +  P+ V  S +  G                 
Sbjct: 678 AILNRCGIARPRGHGVETLEQALDAARDIGYPVLVRPSYVLGG---------------QN 722

Query: 70  VRVESSLKSVISDIREIL-----GSTLITKQTGPTGSRVNCVYVEDGADI 114
           + +    +SV + +R +L     G  LI       G+ V    V DG D+
Sbjct: 723 MIIAYDDESVSNYMRRLLAIGTDGPVLI--DKYLEGTEVEVDAVCDGTDV 770


>gi|222080811|ref|YP_002542539.1| urea carboxylase [Agrobacterium radiobacter K84]
 gi|221725490|gb|ACM28579.1| urea carboxylase [Agrobacterium radiobacter K84]
          Length = 1135

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 37/224 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L R+  VP+  G  ++ +   A +A   +  P  ++KS    GG             
Sbjct: 76  ARELARESGVPLLPGSGLLETSDDALTAATDIGYP-LMLKSTAGGGGI------------ 122

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+++    +S+ +    +          G        VY+E      R + + +  D 
Sbjct: 123 --GMQLCEDPESLKAVFDSV--QRTARASFGDA-----RVYLERFVAKARHVEVQIFGDG 173

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQARI 185
              ++A       G     + +   + I +    P  G++    A L    + L   A  
Sbjct: 174 NGRVIAL------GERDCSLQRRNQKVIEET---PAPGLSDAVRARLHAAAVALGTSAHY 224

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   +Y    + +   LE+N  + +++    V ++    D
Sbjct: 225 RSAGTVEFIYDRARE-EFYFLEVNTRLQVEHP---VTEAVFGID 264


>gi|239826483|ref|YP_002949107.1| pyruvate carboxylase [Geobacillus sp. WCH70]
 gi|239806776|gb|ACS23841.1| pyruvate carboxylase [Geobacillus sp. WCH70]
          Length = 1147

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 39/212 (18%)

Query: 6   YQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +QA  L     +PV  G    + S+       +T   P+ ++K+ +  GGRG    +   
Sbjct: 126 HQA-EL---AGIPVIPGSDGPVHSLEEVVRFAETYGYPI-IIKAALGGGGRGMRIVRS-- 178

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              K  V+     +   S+ +   GS                VYVE   +  + + + +L
Sbjct: 179 ---KSEVKEAY--ERAKSEAKAAFGSD--------------DVYVEKLIERPKHIEVQIL 219

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQA 183
            D        +   +    ++   +   +    + +     +      +   +++  G  
Sbjct: 220 GDYEGN---IVHLYERDCSVQRRHQKVVEVAPSVSL--SDELRQRICEAAVKLMKNVGYV 274

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
                +   +        D   +E+NP I ++
Sbjct: 275 NAGTVEFLVS------GNDFYFIEVNPRIQVE 300


>gi|182418799|ref|ZP_02950066.1| phosphoribosylamine--glycine ligase [Clostridium butyricum 5521]
 gi|237667076|ref|ZP_04527060.1| phosphoribosylamine--glycine ligase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377354|gb|EDT74914.1| phosphoribosylamine--glycine ligase [Clostridium butyricum 5521]
 gi|237655424|gb|EEP52980.1| phosphoribosylamine--glycine ligase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 416

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+    + V+ A   ++T   P  VVK+   A G+             
Sbjct: 106 SKDFMKKYGVKTAEYATFTDVYEALKYLETCTYPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +  I+ + E     ++ ++ G  G   N + +E+  + +    LS+ 
Sbjct: 152 -GVIICENKEEAITAVNEC----MVDEKFGSAG---NKIVIEEFLEGIEASILSIT 199


>gi|74226928|dbj|BAE27107.1| unnamed protein product [Mus musculus]
          Length = 1010

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|15964611|ref|NP_384964.1| phosphoribosylamine--glycine ligase [Sinorhizobium meliloti 1021]
 gi|20139566|sp|Q92RL0|PUR2_RHIME RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|15073789|emb|CAC45430.1| Probable phosphoribosylamine--glycine ligase [Sinorhizobium
           meliloti 1021]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 15/78 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y +P       +    A++ I+    P+ V+K+   A G+              
Sbjct: 107 KDLCARYGIPTGAYRRFTDAEPAKAYIREEGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREI 86
           GV V  SL    + + E 
Sbjct: 152 GVTVAMSLDEAFAAVDEC 169


>gi|20807088|ref|NP_622259.1| phosphoribosylamine--glycine ligase [Thermoanaerobacter
           tengcongensis MB4]
 gi|25091076|sp|Q8RC54|PUR2_THETN RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|20515579|gb|AAM23863.1| Phosphoribosylamine-glycine ligase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 417

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 22/108 (20%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y AK ++ KY +P  +         A   +K    P+ V+K+   A G+           
Sbjct: 104 YFAKQIMAKYEIPTGRFKAFDRYQEALKFLKETWYPV-VIKADGLAQGK----------- 151

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +           +E+L   +  +  GP+G  V    VE+   
Sbjct: 152 ---GVFIVRDFIE----AKEVLDLMMKKRVFGPSGDIV---IVEEMLY 189


>gi|22095481|sp|O27077|CARB_METTH RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1060

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 46/265 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P A   +  S   A +  + +  P+ V  S +  G                 
Sbjct: 665 EVLNKLGIPQAPYGIAKSFEDARAVAERIGYPVLVRPSYVLGG---------------RA 709

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +RE        + +      V+    ED  ++  +  L    D   G
Sbjct: 710 MEIVYDDVELEEYMRE------AVRVSPEHPILVDKFL-EDAIEVDVDA-LCDGTDVYIG 761

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG- 188
            +       G    +      PQ I + +ID +   T      L   LE+ G   I    
Sbjct: 762 GIMEHIEEAGVHSGDSACVIPPQSIPEDIIDTIKEYT----RKLALELEVVGLINIQYAV 817

Query: 189 --DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLDIQELRD- 244
             D  P++Y    + +       P +    G     + +++              +LRD 
Sbjct: 818 KPDSDPSVY--ILEANPRASRTVPFVSKATGVPLAKMAARLMMG----------AKLRDL 865

Query: 245 --VSEEDSREIEAKQHNLSYIALDG 267
               E+D   +  K+    +I L G
Sbjct: 866 GLTEEKDIEHVAVKESVFPFIKLPG 890



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 46/312 (14%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++K N PV     +SSV  A  A++ +  P+ V  +    G             + GGV 
Sbjct: 134 MKKLNEPVPAARAVSSVEEALEAVEEIGYPVIVRPAFTLGG-------------TGGGV- 179

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              S   +I      L  +            +N V ++      +E    ++ DR    +
Sbjct: 180 -AHSRDELIEIATRGLEMSF-----------INQVLIDQSVLGWKEFEYEVMRDRNDTCI 227

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
             + + +   +I+ +     + +   ++ P   ++ ED          +   L+++G   
Sbjct: 228 IVLCNME---NIDPMGIHTGESV---VVAPAQTLSDEDNQRLRDAAIKIIRALKIEGGCN 281

Query: 185 IDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLDIQEL 242
           I          YK   + +  +   + L     G     + +KI+          DI + 
Sbjct: 282 IQFAVHPETGEYKV-IEVNPRVSRSSALASKATGYPIAKIAAKIAVGMTLDEIQNDITKE 340

Query: 243 RDVS-EEDSREIEAKQHNLSYIALDG---NIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
              S E     +  K     +    G    IG  +   G  MA    ++         LD
Sbjct: 341 TPASFEPTIDYVVTKIPRWPFDKFKGISREIGVQMKSTGEVMAIGRTLEESLNKAIRSLD 400

Query: 299 VGGGADQDKVAA 310
           +G     +    
Sbjct: 401 IGADGFTETPYT 412


>gi|126442021|ref|YP_001058279.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 668]
 gi|134281093|ref|ZP_01767802.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 305]
 gi|167718780|ref|ZP_02402016.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           DM98]
 gi|167893483|ref|ZP_02480885.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           7894]
 gi|167901936|ref|ZP_02489141.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei NCTC
           13177]
 gi|167918200|ref|ZP_02505291.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           BCC215]
 gi|217419888|ref|ZP_03451394.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 576]
 gi|237811526|ref|YP_002895977.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           MSHR346]
 gi|254181238|ref|ZP_04887835.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1655]
 gi|126221514|gb|ABN85020.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 668]
 gi|134247399|gb|EBA47484.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 305]
 gi|184211776|gb|EDU08819.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           1655]
 gi|217397192|gb|EEC37208.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei 576]
 gi|237503272|gb|ACQ95590.1| phosphoribosylamine--glycine ligase [Burkholderia pseudomallei
           MSHR346]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYE-TFTDAAAAHAYVDSKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|315637389|ref|ZP_07892602.1| carbamoyl-phosphate synthase, large subunit [Arcobacter butzleri
           JV22]
 gi|315478281|gb|EFU69001.1| carbamoyl-phosphate synthase, large subunit [Arcobacter butzleri
           JV22]
          Length = 1081

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++K  + + K     ++  A    K +  P+    S   AGG     +            
Sbjct: 134 MKKIGMDLPKSANAYTLEEAIKVAKEIGFPVISRASFTLAGGGSGVAYNMEEFKVLAAAG 193

Query: 72  VESSLKSVISDIREILG 88
           +E+S  + I  +  +LG
Sbjct: 194 IEASPINEIEIMESMLG 210


>gi|312865431|ref|ZP_07725658.1| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Streptococcus downei F0415]
 gi|311098949|gb|EFQ57166.1| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Streptococcus downei F0415]
          Length = 751

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA--DS 66
           K +L+K   PV  G   + +  A SA         V+K +    G G   FKE  +  D 
Sbjct: 489 KKILQKAGFPVPAGAEFNQLEEALSAYPNFATKAIVIKPKSTNFGLGISIFKEGASRVDY 548

Query: 67  KGGVRVESSLKSVISDIREILGST 90
           +  + +  +    +     I G+ 
Sbjct: 549 QKALELAFAEDESVLIEEFIPGTE 572


>gi|260662296|ref|ZP_05863192.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553679|gb|EEX26571.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           fermentum 28-3-CHN]
          Length = 1029

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 33/211 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L+ +   PV   + + +V AA    +    P+ V  +    G             +
Sbjct: 131 QFKQLMEEIGQPVPASLTVHTVEAACQFAEEAGYPVIVRPAFTLGG-------------T 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+   +  + +    +  L  + +T+             +E     L+E+   ++ D 
Sbjct: 178 GGGI--ANDQEELELIAKRGLAQSPVTEC-----------LIEQSIAGLKEIEFEVMRDA 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               ++                       + L D           ++   L+++G   + 
Sbjct: 225 NGDEISVCCMENFDPVGIHTGDSIVVAPNQTLPDVQYQRLRSAALAIVAALKIEGGCNVQ 284

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  L ++    D  ++E+NP +   + 
Sbjct: 285 -------LAQSPISDDYYVIEVNPRVSRSSA 308



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +Q + LL+   +   KG    ++  A+     +  P+ V  S +  GGR     + 
Sbjct: 669 HQFEELLKDAGIAQPKGATALNLAEAKVIAPVVGYPVMVRPSFVL-GGRAMAVVEN 723


>gi|260174634|ref|ZP_05761046.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp. D2]
 gi|293369731|ref|ZP_06616307.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides ovatus
           SD CMC 3f]
 gi|315922898|ref|ZP_07919138.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|292635153|gb|EFF53669.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides ovatus
           SD CMC 3f]
 gi|313696773|gb|EFS33608.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 389

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 29/147 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     ++   + A   +  P  VVK  + + G+G+             V+    
Sbjct: 116 GLKTAKYFYAKTLEELKEAADKIGFPC-VVKPLMSSSGKGQSL-----------VKSADE 163

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+                  +G  G  +  + +E+      E  ++LL            
Sbjct: 164 LEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQKNGPTLFC 209

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPL 162
              G +   +   DY +      IDP 
Sbjct: 210 PPIGHV---QKGGDYRESFQPAHIDPA 233


>gi|237718131|ref|ZP_04548612.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           2_2_4]
 gi|229452552|gb|EEO58343.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           2_2_4]
          Length = 388

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 29/147 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     ++   + A   +  P  VVK  + + G+G+             V+    
Sbjct: 115 GLKTAKYFYAKTLEELKEAADKIGFPC-VVKPLMSSSGKGQSL-----------VKSADE 162

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+                  +G  G  +  + +E+      E  ++LL            
Sbjct: 163 LEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQKNGPTLFC 208

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPL 162
              G +   +   DY +      IDP 
Sbjct: 209 PPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|283797347|ref|ZP_06346500.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. M62/1]
 gi|291075019|gb|EFE12383.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. M62/1]
 gi|295090497|emb|CBK76604.1| carbamoyl-phosphate synthase large subunit [Clostridium cf.
           saccharolyticum K10]
          Length = 1071

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + +A+  V  SV  A +    L  P+ V++     GG G G           
Sbjct: 132 KETMASLGIEMARSEVAYSVEEALAIADKLGYPV-VLRPAYTMGGEGGG----------- 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +++ + +     L +++           V  V VE+      EL L ++ D  +
Sbjct: 180 ---LVYNVEELKTVCARGLQASM-----------VGQVLVEESILGWEELELEVVRDSKN 225

Query: 129 GMVAF 133
            M+  
Sbjct: 226 NMITV 230



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R    K N+P+ +  +  +V  A      +  P+ V  S +  GGRG
Sbjct: 665 RDLFRAMMDKLNIPMPESGMAVNVEEALEIANKIGYPVMVRPSYVL-GGRG 714


>gi|691792|gb|AAC53251.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide formyltransferase
           [Mus musculus]
          Length = 1010

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|50403785|sp|Q64737|PUR2_MOUSE RecName: Full=Trifunctional purine biosynthetic protein
           adenosine-3; Includes: RecName:
           Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=Glycinamide ribonucleotide synthetase; Short=GARS;
           AltName: Full=Phosphoribosylglycinamide synthetase;
           Includes: RecName:
           Full=Phosphoribosylformylglycinamidine cyclo-ligase;
           AltName: Full=AIR synthase; Short=AIRS; AltName:
           Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
           RecName: Full=Phosphoribosylglycinamide
           formyltransferase; AltName:
           Full=5'-phosphoribosylglycinamide transformylase;
           AltName: Full=GAR transformylase; Short=GART
          Length = 1010

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|254246384|ref|ZP_04939705.1| Biotin carboxylase [Burkholderia cenocepacia PC184]
 gi|124871160|gb|EAY62876.1| Biotin carboxylase [Burkholderia cenocepacia PC184]
          Length = 455

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 115/339 (33%), Gaps = 57/339 (16%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +           +T+  P+ ++K+    GGRG        A
Sbjct: 119 AKQTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPV-IIKAAGGCGGRGMRVVHTEAA 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  + +++     +    LG+                VY+E   +  R + + +L 
Sbjct: 178 -------LVNAVNMTREEAGRALGNP--------------QVYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +        G     + + + + I +    P  G+    +  + D       A 
Sbjct: 217 DAYKNAIWL------GERDCSMQRRHQKVIEEA---PAPGIPRRLIDRIGDR---CADAC 264

Query: 185 IDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
              G L    ++  + + +   +E+N       P+  +  G  +     +I+  +    R
Sbjct: 265 KKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVSELITGVDIVQEQIRIAAGEKLTLR 324

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-APA 294
             DIQ  R  + E     E       +    G I    +  G     +D     G   P 
Sbjct: 325 QRDIQ-FRGHAIECRINAE---DPFKFTPSPGRI-TSWHTPGGPGVRVDSHAYNGYFVPP 379

Query: 295 NFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
           N+  + G     GA +++  +  +I  S+  V+GI  NI
Sbjct: 380 NYDSMIGKLITYGATREQAISRMRIALSEMVVEGIQTNI 418


>gi|299146014|ref|ZP_07039082.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_1_23]
 gi|298516505|gb|EFI40386.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides sp.
           3_1_23]
          Length = 388

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 29/147 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     ++   + A   +  P  VVK  + + G+G+             V+    
Sbjct: 115 GLKTAKYFYAKTLEELKEAADKIGFPC-VVKPLMSSSGKGQSL-----------VKSADE 162

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+                  +G  G  +  + +E+      E  ++LL            
Sbjct: 163 LEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQKNGPTLFC 208

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPL 162
              G +   +   DY +      IDP 
Sbjct: 209 PPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|297728737|ref|NP_001176732.1| Os11g0696150 [Oryza sativa Japonica Group]
 gi|255680397|dbj|BAH95460.1| Os11g0696150 [Oryza sativa Japonica Group]
          Length = 60

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 195 YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR 235
           Y  F D D S LE+NP  I+ NG    LD +   DD A ++
Sbjct: 1   YAPFTDLDFSFLEMNPFTIV-NGEPYPLDMRGELDDTAAFK 40


>gi|237727858|ref|ZP_04558339.1| phosphoribosylglycineamide synthetase [Citrobacter sp. 30_2]
 gi|226910415|gb|EEH96333.1| phosphoribosylglycineamide synthetase [Citrobacter sp. 30_2]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|218187691|gb|EEC70118.1| hypothetical protein OsI_00781 [Oryza sativa Indica Group]
          Length = 499

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+ K    K+ +P+   V + ++ + E A +    PL V   ++   GRG          
Sbjct: 51  YRQKTHFSKFGIPLPDFVEVDTLSSIEKAGEMFGYPLMVKSKRLAYDGRGNA-------- 102

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 V    K + S +  + G               + +YVE     ++EL + +   
Sbjct: 103 ------VAHDKKELSSVVASLGGFE-------------HGLYVERWTSFVKELSVIVARS 143

Query: 126 RTSGMVAF----IASTQGGMDIEEVAKDYPQKIFKLL 158
           R    V +             + E   + P KI KL 
Sbjct: 144 RDGSTVCYPVVETIHKDNICHVVEAPAEVPDKIKKLA 180


>gi|168234403|ref|ZP_02659461.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194471203|ref|ZP_03077187.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194457567|gb|EDX46406.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205331662|gb|EDZ18426.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|195952929|ref|YP_002121219.1| Carbamoyl-phosphate synthase L chain ATP-binding [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195932541|gb|ACG57241.1| Carbamoyl-phosphate synthase L chain ATP-binding [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 528

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 46/206 (22%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           AL+++  +   +G +  +   A    K +  P+ V  S +  G                 
Sbjct: 123 ALMKELGILQPEGGIAITKEEAIKVAKDIGYPVLVRPSYVLGG---------------RA 167

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  +   ++  + + +    ++ Q          V ++   +   E+ +  L D    
Sbjct: 168 MKIVYTESELLDYLEQAVD---VSYQRP--------VLIDKYLNDSIEVDVDALSDGED- 215

Query: 130 MVAFIAS-----TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
               I +      + G+   + A   P    K   D L  +  E    +   L+++G   
Sbjct: 216 --VLIGAIMEHIEEAGIHSGDSAASIPPYTLKE--DVLKEIR-EQTIKIAKALKVKGLIN 270

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
           +           A  D    +LE+NP
Sbjct: 271 LQF---------AIKDNIPYVLEVNP 287


>gi|160884427|ref|ZP_02065430.1| hypothetical protein BACOVA_02411 [Bacteroides ovatus ATCC 8483]
 gi|156110166|gb|EDO11911.1| hypothetical protein BACOVA_02411 [Bacteroides ovatus ATCC 8483]
          Length = 389

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 29/147 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     ++   + A   +  P  VVK  + + G+G+             V+    
Sbjct: 116 GLKTAKYFYAKTLEELKEAADKIGFPC-VVKPLMSSSGKGQSL-----------VKSADE 163

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+                  +G  G  +  + +E+      E  ++LL            
Sbjct: 164 LEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQKNGPTLFC 209

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPL 162
              G +   +   DY +      IDP 
Sbjct: 210 PPIGHV---QKGGDYRESFQPAHIDPA 233


>gi|83719293|ref|YP_441568.1| phosphoribosylamine--glycine ligase [Burkholderia thailandensis
           E264]
 gi|167580367|ref|ZP_02373241.1| phosphoribosylamine--glycine ligase [Burkholderia thailandensis
           TXDOH]
 gi|167618470|ref|ZP_02387101.1| phosphoribosylamine--glycine ligase [Burkholderia thailandensis
           Bt4]
 gi|257139744|ref|ZP_05588006.1| phosphoribosylamine--glycine ligase [Burkholderia thailandensis
           E264]
 gi|83653118|gb|ABC37181.1| phosphoribosylamine--glycine ligase [Burkholderia thailandensis
           E264]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A     +   AA + I +   P+ VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYETFTDAAAAHAYIDSKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E   D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHAAVD----MMLSGNKLGDAGARV---VIEAFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|329114164|ref|ZP_08242926.1| Carbamoyl-phosphate synthase large chain [Acetobacter pomorum
           DM001]
 gi|326696240|gb|EGE47919.1| Carbamoyl-phosphate synthase large chain [Acetobacter pomorum
           DM001]
          Length = 1084

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +   +  +  +   AE+  + +  P+ V  S +  G
Sbjct: 687 LHKLGLRQPENGIARTPEEAEAVAEKVGYPVVVRPSYVLGG 727


>gi|304407621|ref|ZP_07389273.1| alpha-L-glutamate ligase, RimK family [Paenibacillus
           curdlanolyticus YK9]
 gi|304343572|gb|EFM09414.1| alpha-L-glutamate ligase, RimK family [Paenibacillus
           curdlanolyticus YK9]
          Length = 297

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            IH  QA  +  K+ +P  +  V  +      A+      + V+K    + GRG  R   
Sbjct: 91  KIH--QAI-VFNKHGIPQPRYQVAFTPAKLFDALSDFG-DICVIKPATSSWGRGIARMTG 146

Query: 62  LPA 64
              
Sbjct: 147 KEC 149


>gi|304312272|ref|YP_003811870.1| Phosphoribosylamine-glycine ligase [gamma proteobacterium HdN1]
 gi|301798005|emb|CBL46227.1| Phosphoribosylamine-glycine ligase [gamma proteobacterium HdN1]
          Length = 431

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 26/118 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP--LYVVKSQIHAGGRGKGRFKELPAD 65
           +K  L ++ +P A      +    E AI  L G     VVK+   A G+           
Sbjct: 108 SKDFLARHRIPTAAYQ---NFTEIEPAIAYLRGQKMPIVVKADGLAAGK----------- 153

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
              GV +  +    I+ ++++LG      + G  G RV    +E+        ++ ++
Sbjct: 154 ---GVIIAQTEAEAIAAVQDMLG----GNRFGEAGHRV---VIEEFLSGEEASFICMV 201


>gi|299783110|gb|ADJ41108.1| Carbamoyl-phosphate synthase large subunit [Lactobacillus fermentum
           CECT 5716]
          Length = 1029

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 33/211 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L+ +   PV   + + +V AA    +    P+ V  +    G             +
Sbjct: 131 QFKQLMEEIGQPVPASLTVHTVEAACQFAEEAGYPVIVRPAFTLGG-------------T 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+   +  + +    +  L  + +T+             +E     L+E+   ++ D 
Sbjct: 178 GGGI--ANDQEELELIAKRGLAQSPVTEC-----------LIEQSIAGLKEIEFEVMRDA 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               ++                       + L D           ++   L+++G   + 
Sbjct: 225 NGDEISVCCMENFDPVGIHTGDSIVVAPNQTLPDVQYQRLRSAALAIVAALKIEGGCNVQ 284

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  L ++    D  ++E+NP +   + 
Sbjct: 285 -------LAQSPISDDYYVIEVNPRVSRSSA 308



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +Q + LL+   +   KG    ++  A+     +  P+ V  S +  GGR     + 
Sbjct: 669 HQFEELLKDAGIAQPKGATALNLAEAKVIAPVVGYPVMVRPSFVL-GGRAMAVVEN 723


>gi|291445989|ref|ZP_06585379.1| phosphoribosylglycinamide synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|291348936|gb|EFE75840.1| phosphoribosylglycinamide synthetase [Streptomyces roseosporus NRRL
           15998]
          Length = 307

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 32/102 (31%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +    VP A+  V ++    + A+     P YVVK    A G+              GV 
Sbjct: 1   MAGAGVPTARSYVCTTPAEIDEALDAFGAP-YVVKDDGLAAGK--------------GVV 45

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           V   +    +                      + V +E+  D
Sbjct: 46  VTEDVDVARAHA-----------------LSCDRVVIEEFLD 70


>gi|194014423|ref|ZP_03053040.1| carbamoyl-phosphate synthase, large subunit [Bacillus pumilus ATCC
           7061]
 gi|194013449|gb|EDW23014.1| carbamoyl-phosphate synthase, large subunit [Bacillus pumilus ATCC
           7061]
          Length = 1071

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            VP  KG   +SV  A +    +  P+ V  S +  G
Sbjct: 678 GVPQPKGKTATSVPEAVAIANQIGYPVLVRPSYVLGG 714


>gi|184155204|ref|YP_001843544.1| carbamoyl-phosphate synthase large subunit [Lactobacillus fermentum
           IFO 3956]
 gi|183226548|dbj|BAG27064.1| carbamoyl-phosphate synthase large subunit [Lactobacillus fermentum
           IFO 3956]
          Length = 1029

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 33/211 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L+ +   PV   + + +V AA    +    P+ V  +    G             +
Sbjct: 131 QFKQLMEEIGQPVPASLTVHTVEAACQFAEEAGYPVIVRPAFTLGG-------------T 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+   +  + +    +  L  + +T+             +E     L+E+   ++ D 
Sbjct: 178 GGGI--ANDQEELELIAKRGLAQSPVTEC-----------LIEQSIAGLKEIEFEVMRDA 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               ++                       + L D           ++   L+++G   + 
Sbjct: 225 NGDEISVCCMENFDPVGIHTGDSIVVAPNQTLPDVQYQRLRSAALAIVAALKIEGGCNVQ 284

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  L ++    D  ++E+NP +   + 
Sbjct: 285 -------LAQSPISDDYYVIEVNPRVSRSSA 308



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +Q + LL+   +   KG    ++  A+     +  P+ V  S +  GGR     + 
Sbjct: 669 HQFEELLKDAGIAQPKGATALNLAEAKVIAPVVGYPVMVRPSFVL-GGRAMAVVEN 723


>gi|170017351|ref|YP_001728270.1| carbamoylphosphate synthase large subunit (split gene in MJ)
           [Leuconostoc citreum KM20]
 gi|226700933|sp|B1MZ74|CARB_LEUCK RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|169804208|gb|ACA82826.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
           [Leuconostoc citreum KM20]
          Length = 1059

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 41/213 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL+ + N P+ + V+ ++V  A     T   P+ V               +        
Sbjct: 133 KALMERLNEPIPESVIATTVEEAVDFADTHGYPVIV---------------RPAYTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  + ++ + ++                G   S V  V +E      +E+   ++  R +
Sbjct: 178 GGGIAATHQELVDISAN-----------GLELSPVTQVLIERSIAGYKEIEFEVM--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
              A + ++    D   V       I    +    D  + +  +    +   L+++G   
Sbjct: 225 HDNALVVASMENFDP--VGVHTGDSIVTAPVQTLSDREVQMMRDAALKIIRALKIEGGVN 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I    L P  YK +       +E+NP +   + 
Sbjct: 283 IQMA-LDPQSYKYYI------IEVNPRVSRSSA 308


>gi|167750589|ref|ZP_02422716.1| hypothetical protein EUBSIR_01565 [Eubacterium siraeum DSM 15702]
 gi|167656515|gb|EDS00645.1| hypothetical protein EUBSIR_01565 [Eubacterium siraeum DSM 15702]
          Length = 397

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 21/123 (17%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y  K + +   +PV  G VI     A+ A          VK+ I A        K +   
Sbjct: 143 YVMKTVFKDNGIPVLDGTVIHISDYAKDA--------DAVKADIKAKIAYPLIVKPINLG 194

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           S  G+ +  + + +   +                    + + VE     L+E+  S+  D
Sbjct: 195 SSVGIMIAHNDEQLDEALDNAFTYA-------------SKLLVEPAITNLKEINCSVCGD 241

Query: 126 RTS 128
             +
Sbjct: 242 YAT 244


>gi|159041861|ref|YP_001541113.1| carbamoyl phosphate synthase large subunit [Caldivirga
           maquilingensis IC-167]
 gi|157920696|gb|ABW02123.1| carbamoyl-phosphate synthase, large subunit [Caldivirga
           maquilingensis IC-167]
          Length = 1031

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 53/181 (29%), Gaps = 28/181 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+    +PV K V    ++ A    + +  P+ V               +        
Sbjct: 127 KNLMLSKGLPVLKSVTAHGINEALRGAEEIGYPVLV---------------RVSFNLGGA 171

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  S + ++S + + L  +            +  V +E      +E+   ++ D   
Sbjct: 172 GAFVARSSEELVSRMHKALAQS-----------EIKEVLIEKYIGGWKEIEFEVMRDSHG 220

Query: 129 GMVAFIASTQ-GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
             VA +       M I             L  D     +      + + + L G+  +  
Sbjct: 221 DSVAVVCMENIDPMGIHTGDSVVVAPCLTLTNDEYQ-RSRYISIKVAESIGLVGECNVQV 279

Query: 188 G 188
            
Sbjct: 280 A 280


>gi|86749228|ref|YP_485724.1| CoA-binding [Rhodopseudomonas palustris HaA2]
 gi|86572256|gb|ABD06813.1| CoA-binding [Rhodopseudomonas palustris HaA2]
          Length = 702

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  +  LL    +PV    +  S + A +A   + GP+ V         + +     L
Sbjct: 488 LNEADSLGLLAARGIPVVPHRLCLSRNEAIAAFNIIGGPVVVKGCSADIAHKSELGLVRL 547

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GV    +   + +++ +I+            GSR + V V   A   RE+ + 
Sbjct: 548 ------GVNSADTTGDIFTEMEQIIAK---------NGSRFDGVIVASMAGGRREMMIG 591


>gi|52549390|gb|AAU83239.1| carbamoyl-phosphate synthase large subunit [uncultured archaeon
           GZfos27B6]
          Length = 1090

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K ++ + +     SV  AE   + L  P+ +  +                  + G
Sbjct: 154 KETMTKLDISMPESSPAYSVEEAEEIAQELGYPVVIRPA-------------YTMGGTGG 200

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++ + + +   + ++LI             V VE+      EL L ++ D+  
Sbjct: 201 GI--VYNVEELKTIVTRGISASLIG-----------QVLVEESVLGWEELELEVIRDKKG 247

Query: 129 GMVAF 133
             +  
Sbjct: 248 NKITV 252



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L R+     ++P  +G    SV  A +  + +  P+ V  S +  GGRG
Sbjct: 689 RELFREMMIKLSIPQPEGGTARSVEEALAVARKIGFPVMVRPSFVL-GGRG 738


>gi|46849365|dbj|BAD17892.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Ambystoma mexicanum]
          Length = 992

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A+    +    A S I +   P  VVK+   A G+             
Sbjct: 94  SKDFMDRHGIPTARWKAFTDPQEACSFINSADFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  + ++    +REIL
Sbjct: 141 -GVIVAENTEAACRAVREIL 159


>gi|42525182|ref|NP_970562.1| pyruvate carboxylase [Bdellovibrio bacteriovorus HD100]
 gi|39577393|emb|CAE81216.1| pyruvate carboxylase [Bdellovibrio bacteriovorus HD100]
          Length = 500

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKS 47
           AKAL++K  VP V    G V  SV  A+   + +  P+ +  S
Sbjct: 121 AKALMKKAGVPTVPGSDGGV-ESVEEAQKIAEQIGLPIIIKAS 162


>gi|323699732|ref|ZP_08111644.1| phosphoribosylamine/glycine ligase [Desulfovibrio sp. ND132]
 gi|323459664|gb|EGB15529.1| phosphoribosylamine/glycine ligase [Desulfovibrio desulfuricans
           ND132]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K ++ +  VP A   V      A + IK    P  VVK+   A G+G
Sbjct: 106 SKNVMAEAGVPTAPFRVFEEYEDAVTFIKERGAP-LVVKADGLAAGKG 152


>gi|307320093|ref|ZP_07599514.1| phosphoribosylamine/glycine ligase [Sinorhizobium meliloti AK83]
 gi|306894308|gb|EFN25073.1| phosphoribosylamine/glycine ligase [Sinorhizobium meliloti AK83]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 15/78 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y +P       +    A++ I+    P+ V+K+   A G+              
Sbjct: 107 KDLCARYGIPTGAYRRFTDAEPAKAYIREEGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREI 86
           GV V  SL    + + E 
Sbjct: 152 GVTVAMSLDEAFAAVDEC 169


>gi|258542083|ref|YP_003187516.1| carbamoyl phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633161|dbj|BAH99136.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636218|dbj|BAI02187.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639273|dbj|BAI05235.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642327|dbj|BAI08282.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645382|dbj|BAI11330.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648437|dbj|BAI14378.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651490|dbj|BAI17424.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654481|dbj|BAI20408.1| carbamoyl-phosphate synthase large subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 1084

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +   +  +  +   AE+  + +  P+ V  S +  G
Sbjct: 687 LHKLGLRQPENGIARTPEEAEAVAEKVGYPVVVRPSYVLGG 727


>gi|227822702|ref|YP_002826674.1| putative acyl-CoA synthetase protein [Sinorhizobium fredii NGR234]
 gi|227341703|gb|ACP25921.1| putative acyl-CoA synthetase protein [Sinorhizobium fredii NGR234]
          Length = 699

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
            V + +G+V  +      A +TL  P+ V+K    A  + +    +L   ++  V
Sbjct: 506 GVTIPRGIVAMTADETADAAETLGFPV-VLKGLCVA-HKTEAGAVKLNLTNREEV 558


>gi|225849299|ref|YP_002729463.1| pyruvate carboxylase (Pyruvic carboxylase) (PYC)
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643093|gb|ACN98143.1| pyruvate carboxylase (Pyruvic carboxylase) (PYC)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 482

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           AK  +R+  VPV  G    IS +  A+     +  P+ ++K+    GGRG    +E
Sbjct: 127 AKKKMRELGVPVLPGSDEPISDIKKAKKIADEIGYPV-ILKAAFGGGGRGMRIVRE 181


>gi|115397665|ref|XP_001214424.1| hypothetical protein ATEG_05246 [Aspergillus terreus NIH2624]
 gi|114192615|gb|EAU34315.1| hypothetical protein ATEG_05246 [Aspergillus terreus NIH2624]
          Length = 1126

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+ L  K  VP+  G   +++S   A S  + L  P+ ++K+    GG G
Sbjct: 78  ARDLAAKAGVPIVPGSAGLVTSGDEAVSVARDLGFPV-MLKATAGGGGMG 126


>gi|104783801|ref|YP_610299.1| phosphoribosylamine--glycine ligase [Pseudomonas entomophila L48]
 gi|95112788|emb|CAK17516.1| phosphoribosylglycinamide synthase [Pseudomonas entomophila L48]
          Length = 431

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLQEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGHN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|327405801|ref|YP_004346639.1| carbamoyl-phosphate synthase large subunit [Fluviicola taffensis
           DSM 16823]
 gi|327321309|gb|AEA45801.1| carbamoyl-phosphate synthase, large subunit [Fluviicola taffensis
           DSM 16823]
          Length = 938

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 21/47 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
            LL K N+P  K  ++ S   A    K L  PL V  S +  G + K
Sbjct: 677 KLLEKNNIPFPKYGIVESAEQAIELSKDLGFPLLVRPSYVLGGQKMK 723


>gi|296536327|ref|ZP_06898437.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Roseomonas cervicalis ATCC 49957]
 gi|296263349|gb|EFH09864.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Roseomonas cervicalis ATCC 49957]
          Length = 375

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E   K  L +  VPVA    + S+   ++A+  L  P  +  +++   GRG+   +  
Sbjct: 109 ILE---KTFLAQAGVPVAPWRPVRSLEELQAAVAELGLPAVLKTTRLGYDGRGQAVLRAP 165

Query: 63  PADSKGGVRVESSL---KSVISDIREI 86
              +    R+       ++ +   +EI
Sbjct: 166 EDLAPAFERLRPHPLILEAFVPFAQEI 192


>gi|291530203|emb|CBK95788.1| D-alanine--D-alanine ligase [Eubacterium siraeum 70/3]
          Length = 397

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 21/123 (17%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y  K + +   +PV  G VI     A+ A          VK+ I A        K +   
Sbjct: 143 YVMKTVFKDNGIPVLDGTVIHISDYAKDA--------DAVKADIKAKIAYPLIVKPINLG 194

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           S  G+ +  + + +   +                    + + VE     L+E+  S+  D
Sbjct: 195 SSVGIMIAHNDEQLDEALDNAFTYA-------------SKLLVEPAITNLKEINCSVCGD 241

Query: 126 RTS 128
             +
Sbjct: 242 YAT 244


>gi|317154738|ref|YP_004122786.1| CoA-binding domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944989|gb|ADU64040.1| CoA-binding domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 700

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A ++   Y +PV +  ++ +   A  A K L  P+ +     H   R       +   +
Sbjct: 491 DAMSVAAAYELPVPETRLVRTSDQAVRAAKKLGYPVALKIVSPHIQSRADVGGVAIDLHT 550

Query: 67  KGGVRVES 74
              VR   
Sbjct: 551 PRDVRDAW 558



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 22/172 (12%)

Query: 232 ALYRHLDIQELR------DVSEEDSREIEAKQHNLSYIALDGNIGCM----VNGAGLAMA 281
           A +R   I E+       D++   S +   K  NL+ I   G  G +      GAGL +A
Sbjct: 270 AAFRQAGIIEMHDLEALFDLARAFSEQPLPKGPNLTVITNSGGPGILAADACEGAGLNLA 329

Query: 282 -----TMDIIKLYGGAPA---NFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGI- 332
                T+ I+       A   N +D+ G A  D+  A  + +  D     IL+ +     
Sbjct: 330 RPSQKTLQILTEALPPFAAIYNPIDIIGDARADRYRATLEAVAQDEITHAILVLLTPTAS 389

Query: 333 MRCDVLVKGILSAVKEVKINIPLVMRLEGAN-VDIGNRLIAESGLNVITAID 383
              +   + I+   K    + P+     G   +  G  ++  +G+      +
Sbjct: 390 AEIEATAQAIIDTAK--ACDKPVFACFMGHERIKPGRDMLLAAGIPCYAYPE 439


>gi|226942123|ref|YP_002797197.1| PurD [Laribacter hongkongensis HLHK9]
 gi|226717050|gb|ACO76188.1| PurD [Laribacter hongkongensis HLHK9]
          Length = 425

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 25/141 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P   G    +  AA  A     G   V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPT-AGYQTFTDAAAARAYVDGKGAPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G+RV    +ED  +       S +V   
Sbjct: 152 -GVVVAMTLAEAHAAIDDML----VGNKMGAAGARV---VIEDFLEGEE---ASFIVMVD 200

Query: 128 SGMVAFIASTQGGMDIEEVAK 148
              V  +A++Q    +++  +
Sbjct: 201 GDHVLAMATSQDHKRLKDNDE 221


>gi|91215432|ref|ZP_01252403.1| phosphoribosylamine--glycine ligase [Psychroflexus torquis ATCC
           700755]
 gi|91186384|gb|EAS72756.1| phosphoribosylamine--glycine ligase [Psychroflexus torquis ATCC
           700755]
          Length = 427

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           AK  ++ +NVP A           A     T   P YV+K+   AGG+            
Sbjct: 110 AKEFMKAHNVPTAAYQSFDKDSLEAGKVFLTTMQPPYVLKADGLAGGK------------ 157

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
             GV + +SLK    ++  +L +          G     V +E+  
Sbjct: 158 --GVLILNSLKEAQDELENMLTNNKF-------GKASEKVVIEEFL 194


>gi|88803444|ref|ZP_01118970.1| carbamoyl-phosphate synthase, large subunit [Polaribacter irgensii
           23-P]
 gi|88781010|gb|EAR12189.1| carbamoyl-phosphate synthase, large subunit [Polaribacter irgensii
           23-P]
          Length = 951

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+  N+P  +  +  S   A      L  P+ V  S +  G                G+
Sbjct: 690 LLKDNNIPYPEFGIAESADEALVLADELDFPILVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + ++  + ++LG  
Sbjct: 735 KIVINKEELVVHVVDLLGRM 754


>gi|311747376|ref|ZP_07721161.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Algoriphagus
           sp. PR1]
 gi|311302644|gb|EAZ83258.2| acetyl-CoA carboxylase, biotin carboxylase subunit [Algoriphagus
           sp. PR1]
          Length = 449

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 28/183 (15%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +R   VP   G   ++ S+         +  P+ ++K+    GGRG    KE    
Sbjct: 119 AKATMRAAGVPTVPGSEGLLDSIEQGVKLANEMGYPV-ILKATAGGGGRGMRIVKE---- 173

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            + G +          +     G+                +Y+E   +  R + + ++ D
Sbjct: 174 -ESGFKKAW--DDARMESGAAFGND--------------GLYLEKFVEEPRHIEIQIIGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
           +          ++    I+   +   ++     I D L     E      + +  +G   
Sbjct: 217 KHGKACHL---SERDCSIQRRHQKLVEETPSPFITDELRKAMGEAAIKGAEAIGYEGAGT 273

Query: 185 IDG 187
           I+ 
Sbjct: 274 IEF 276


>gi|301308481|ref|ZP_07214435.1| ATP-grasp domain protein [Bacteroides sp. 20_3]
 gi|300833951|gb|EFK64567.1| ATP-grasp domain protein [Bacteroides sp. 20_3]
          Length = 401

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 7/68 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +          +Y V  A    I +  A   AI  + G   ++K+   AG +G  +  
Sbjct: 111 MKLR-------FSEYGVNTAPFKQIYTDEALLDAIDKVGGYPVIIKATDLAGSQGIYKAV 163

Query: 61  ELPADSKG 68
                  G
Sbjct: 164 NKEEAFDG 171


>gi|296313776|ref|ZP_06863717.1| phosphoribosylamine--glycine ligase [Neisseria polysaccharea ATCC
           43768]
 gi|296839704|gb|EFH23642.1| phosphoribosylamine--glycine ligase [Neisseria polysaccharea ATCC
           43768]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGVPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 182


>gi|295396137|ref|ZP_06806320.1| carbamoyl-phosphate synthase, large subunit [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971078|gb|EFG46970.1| carbamoyl-phosphate synthase, large subunit [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 1089

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 68/222 (30%), Gaps = 43/222 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +   K    ++   AE+  +++  P+ V  S +  G                G
Sbjct: 681 RVLHQAGLLAPKHGTATTYEEAEAIAESIGYPVLVRPSYVLGG---------------RG 725

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-------RELYLSL 122
           +++      + S           T+ +      V+    ED  +I         +LY+  
Sbjct: 726 MQIVYDNAQLRSY------MDSATEVSPTRPVLVDRFL-EDAVEIDVDALFDGEDLYIGG 778

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           +++            + G+   + A   P     L  + L  V S    ++ +   ++G 
Sbjct: 779 VMEHI---------EEAGIHSGDSACVLP--AITLGENVLKRVRSA-TRAIAEGTGVRGL 826

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
             I        LY    + +       P +    G+     +
Sbjct: 827 LNIQFAVAADVLY--VIEANPRASRTVPFVSKATGKQLAKAA 866


>gi|283836744|ref|ZP_06356485.1| phosphoribosylamine--glycine ligase [Citrobacter youngae ATCC
           29220]
 gi|291067297|gb|EFE05406.1| phosphoribosylamine--glycine ligase [Citrobacter youngae ATCC
           29220]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|297568880|ref|YP_003690224.1| carbamoyl-phosphate synthase, large subunit [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924795|gb|ADH85605.1| carbamoyl-phosphate synthase, large subunit [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 1073

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 33/161 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  +RK  + V + V+I ++  A++A   +  P+ V         R              
Sbjct: 133 REAMRKIGLKVPESVIIHTIAEAKTAAVEIGFPVIV---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + +       L  ++ ++           V +E      +E  L ++ D+ +
Sbjct: 181 ---IAYNQQELEDICEHGLDLSINSE-----------VMLEKSLLGWKEYELEVMRDK-N 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
             V  I S      IE +          + + P   +T  +
Sbjct: 226 DNVVIICS------IENLDPMGVHTGDSITVAPAQTLTDRE 260


>gi|256616679|ref|ZP_05473525.1| acetyl-CoA carboxylase [Enterococcus faecalis ATCC 4200]
 gi|256596206|gb|EEU15382.1| acetyl-CoA carboxylase [Enterococcus faecalis ATCC 4200]
          Length = 456

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|256544656|ref|ZP_05472028.1| phosphoribosylamine--glycine ligase [Anaerococcus vaginalis ATCC
           51170]
 gi|256399545|gb|EEU13150.1| phosphoribosylamine--glycine ligase [Anaerococcus vaginalis ATCC
           51170]
          Length = 414

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 22/117 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KY +P AK     +   A++++K    P  V+K+     G+              
Sbjct: 107 KNFLEKYKIPTAKYKSFENFDNAKNSLKEFSYP-LVIKADGLCLGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           GV +    K  I  + +I    +     G  G  V    +E+         L L+ +
Sbjct: 152 GVIICEDEKKAIETLDDIFNKKIF----GDEGKTV---VIEEFLKGEEASLLCLVSN 201


>gi|227514706|ref|ZP_03944755.1| glutamine-hydrolyzing carbamoyl-phosphate synthase [Lactobacillus
           fermentum ATCC 14931]
 gi|227086910|gb|EEI22222.1| glutamine-hydrolyzing carbamoyl-phosphate synthase [Lactobacillus
           fermentum ATCC 14931]
          Length = 1029

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 33/211 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L+ +   PV   + + +V AA    +    P+ V  +    G             +
Sbjct: 131 QFKQLMEEIGQPVPASLTVHTVEAACQFAEEAGYPVIVRPAFTLGG-------------T 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+   +  + +    +  L  + +T+             +E     L+E+   ++ D 
Sbjct: 178 GGGI--ANDQEELELIAKRGLAQSPVTEC-----------LIEQSIAGLKEIEFEVMRDA 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               ++                       + L D           ++   L+++G   + 
Sbjct: 225 NGDEISVCCMENFDPVGIHTGDSIVVAPNQTLPDVQYQRLRSAALAIVAALKIEGGCNVQ 284

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                  L ++    D  ++E+NP +   + 
Sbjct: 285 -------LAQSPISDDYYVIEVNPRVSRSSA 308



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +Q + LL+   +   KG    ++  A+     +  P+ V  S +  GGR     + 
Sbjct: 669 HQFEELLKDAGIAQPKGATALNLAEAKVIAPVVGYPVMVRPSFVL-GGRAMAVVEN 723


>gi|227519399|ref|ZP_03949448.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis TX0104]
 gi|256963925|ref|ZP_05568096.1| acetyl-CoA carboxylase [Enterococcus faecalis HIP11704]
 gi|257084219|ref|ZP_05578580.1| acetyl-CoA carboxylase [Enterococcus faecalis Fly1]
 gi|257417048|ref|ZP_05594042.1| acetyl-CoA carboxylase [Enterococcus faecalis AR01/DG]
 gi|307272116|ref|ZP_07553379.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0855]
 gi|307286835|ref|ZP_07566917.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0109]
 gi|307289805|ref|ZP_07569741.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0411]
 gi|227073153|gb|EEI11116.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis TX0104]
 gi|256954421|gb|EEU71053.1| acetyl-CoA carboxylase [Enterococcus faecalis HIP11704]
 gi|256992249|gb|EEU79551.1| acetyl-CoA carboxylase [Enterococcus faecalis Fly1]
 gi|257158876|gb|EEU88836.1| acetyl-CoA carboxylase [Enterococcus faecalis ARO1/DG]
 gi|306499139|gb|EFM68618.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0411]
 gi|306502050|gb|EFM71336.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0109]
 gi|306511232|gb|EFM80239.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0855]
 gi|315166307|gb|EFU10324.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX1302]
 gi|315171890|gb|EFU15907.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX1342]
 gi|315173924|gb|EFU17941.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX1346]
          Length = 456

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|224540871|ref|ZP_03681410.1| hypothetical protein CATMIT_00014 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526206|gb|EEF95311.1| hypothetical protein CATMIT_00014 [Catenibacterium mitsuokai DSM
           15897]
          Length = 453

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           A+ ++ +  VPV  G    +++    +  +  +  P+ + K+    GGRG  +
Sbjct: 119 AREIMIEAGVPVVPGSNGSVNTYEELKEVVNEIGYPVLI-KASAGGGGRGMRK 170


>gi|52308343|gb|AAU38843.1| CarB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 1100

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 41/159 (25%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  S   A  A + +  P  +             R       S G
Sbjct: 163 KEAMAKIGLNTPKSFVCHSFDEAWKAQEEVGFPTLI-------------RPSFTMGGSGG 209

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +     +               G   S  + + +E      +E  + ++ D+  
Sbjct: 210 GI--AYNRDEFQAICER-----------GFEASPTHELLIEQSVLGWKEYEMEVVRDKAD 256

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 257 NCIIV-------CSIENFDPMGVHTGDSITVAPAQTLTD 288


>gi|325269766|ref|ZP_08136376.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella
           multiformis DSM 16608]
 gi|324987739|gb|EGC19712.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella
           multiformis DSM 16608]
          Length = 393

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 34/185 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     S    ++A   +  P  VVK  + + G G+                  +
Sbjct: 115 GLRTAKYFYAKSYDEFKTAADVIGFPC-VVKPLMSSSGHGQSY--------------VHN 159

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
            + +    R            G  G  V  V +E+  D   E  L  L            
Sbjct: 160 DEELAEAYR--------NAMEGARGD-VKEVIIEEFIDFESEFTL--LTVTQKNGPTLFC 208

Query: 134 --IASTQGGMDIEEVAKDY--PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
             I   Q G D  E  + +  P++  +        VT     +   +  ++      G  
Sbjct: 209 PPIGHVQKGGDYRESWQPFALPEEALRQAEHIAGEVTR--ALTGYGIWGVEFFLTKQGEV 266

Query: 190 LFPNL 194
           +F  L
Sbjct: 267 IFSEL 271


>gi|312901416|ref|ZP_07760693.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0470]
 gi|311291492|gb|EFQ70048.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0470]
 gi|315033127|gb|EFT45059.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0017]
 gi|315145755|gb|EFT89771.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX2141]
 gi|315169164|gb|EFU13181.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX1341]
          Length = 456

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|300938767|ref|ZP_07153481.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 21-1]
 gi|300456301|gb|EFK19794.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 21-1]
          Length = 429

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTQEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|288926330|ref|ZP_06420254.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella buccae
           D17]
 gi|288336935|gb|EFC75297.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella buccae
           D17]
          Length = 387

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 58/193 (30%), Gaps = 38/193 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     +      A   +  P  VVK  + + G G+           
Sbjct: 105 AKEL----RLRTAKYFYAKTFDEFRKAADEIGFPC-VVKPLMSSSGHGQSY--------- 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             V  +  L+    D  E           G  G  V  + +E+  D   E  L  L    
Sbjct: 151 --VHGDGELEQAFRDAME-----------GSRGD-VKEIIIEEFIDFDSEFTL--LTVTQ 194

Query: 128 SGMVAF----IASTQGGMDIEEVAKDY--PQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
                     I   Q G D  E  + +  P +  K   D    VT  +  + C +  ++ 
Sbjct: 195 KQGPTLFCPPIGHIQKGGDYRESWQPFRLPDEALKAAEDMARKVT--EALTGCGLWGVEF 252

Query: 182 QARIDGGDLFPNL 194
                G  +F  L
Sbjct: 253 FLSRQGEVIFSEL 265


>gi|224537299|ref|ZP_03677838.1| hypothetical protein BACCELL_02177 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521074|gb|EEF90179.1| hypothetical protein BACCELL_02177 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 424

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++ +P A  K +  +++    + ++TL  P YV+K+     G+           
Sbjct: 110 AKGFMERHGIPTARYKSITAANLDEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ E+LG           G     V +E+   
Sbjct: 158 ---GVLILPTLEEAKRELEEMLGGMF--------GQASATVVIEEFLS 194


>gi|212639971|ref|YP_002316491.1| carbamoyl phosphate synthase large subunit [Anoxybacillus
           flavithermus WK1]
 gi|212561451|gb|ACJ34506.1| Carbamoylphosphate synthase large subunit [Anoxybacillus
           flavithermus WK1]
          Length = 1034

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ + N PV +  ++++V  A    K +  P+ V  +    G             + G
Sbjct: 133 RALMYELNEPVPESEIVTTVEEAVQFAKQIGFPIIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    ++  ++  + + L  + IT+             VE      +E+   ++ D T+
Sbjct: 180 GI--AETMDELVDIVTKGLQESPITQC-----------LVERSVAGFKEIEYEVMRDHTN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQAR 184
             +          +I+ V       I         D    +       +   L + G   
Sbjct: 227 TCITI----CNMENIDPVGIHTGDSIVVAPSQTLTDVEYHMLRSAAIKIISALGVVGGCN 282

Query: 185 IDGG 188
           I   
Sbjct: 283 IQFA 286


>gi|331685748|ref|ZP_08386330.1| phosphoribosylamine--glycine ligase [Escherichia coli H299]
 gi|331077058|gb|EGI48274.1| phosphoribosylamine--glycine ligase [Escherichia coli H299]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTQEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|312111741|ref|YP_003990057.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y4.1MC1]
 gi|311216842|gb|ADP75446.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           Y4.1MC1]
          Length = 1064

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +P  +G    SV  A    K +  P+ V  S +  G
Sbjct: 679 IPKPQGKTAFSVEEAVRIAKEIGYPVLVRPSYVLGG 714


>gi|118617400|ref|YP_905732.1| carbamoyl phosphate synthase large subunit [Mycobacterium ulcerans
           Agy99]
 gi|118569510|gb|ABL04261.1| carbamoyl-phosphate synthase large chain CarB [Mycobacterium
           ulcerans Agy99]
          Length = 1121

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K+    A+  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVAKFGGESARSRVCFTMDEVRETVAELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S   V       L ++               V +E+     +E  L L+ D   
Sbjct: 186 ---MAYSADEVDRMAGAGLAASPSAN-----------VLIEESIYGWKEFELELMRDGHD 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE +          + + P + +T  +   L D
Sbjct: 232 NVVVV-------CSIENLDPMGVHTGDSVTVAPAMTLTDREYQRLRD 271



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  +    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DVLTAAGLPAPRYGTATTFAQARRIAEDIGYPVLVRPSYVL-GGRG 738


>gi|108803106|ref|YP_643043.1| phosphoribosylaminoimidazole carboxylase [Rubrobacter xylanophilus
           DSM 9941]
 gi|108764349|gb|ABG03231.1| phosphoribosylaminoimidazole carboxylase [Rubrobacter xylanophilus
           DSM 9941]
          Length = 388

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 34/117 (29%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +  V VA    +       +A++ L  P  +  +     GRG+   +           +
Sbjct: 115 EEAGVRVAPYEPVRDGEDLRAALRRLGTPCVLKTATGGYDGRGQRVIRSEDEAPAALSEL 174

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
                 ++ +        L        G  V      +   +   L+LS++  R   
Sbjct: 175 SGEGTELVLERFVRFEKELSVIAARTPGGEVRTFPPAENVHVDNILHLSIVPARIPR 231


>gi|284924097|emb|CBG37196.1| phosphoribosylglycineamide synthetase [Escherichia coli 042]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTQEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|262382310|ref|ZP_06075447.1| phosphoribosylglycinamide synthetase [Bacteroides sp. 2_1_33B]
 gi|262295188|gb|EEY83119.1| phosphoribosylglycinamide synthetase [Bacteroides sp. 2_1_33B]
          Length = 399

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 7/68 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M +          +Y V  A    I +  A   AI  + G   ++K+   AG +G  +  
Sbjct: 109 MKLR-------FSEYGVNTAPFKQIYTDEALLDAIDKVGGYPVIIKATDLAGSQGIYKAV 161

Query: 61  ELPADSKG 68
                  G
Sbjct: 162 NKEEAFDG 169


>gi|170683731|ref|YP_001746390.1| phosphoribosylamine--glycine ligase [Escherichia coli SMS-3-5]
 gi|218702640|ref|YP_002410269.1| phosphoribosylamine--glycine ligase [Escherichia coli IAI39]
 gi|170521449|gb|ACB19627.1| phosphoribosylamine--glycine ligase [Escherichia coli SMS-3-5]
 gi|218372626|emb|CAR20501.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli IAI39]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTQEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|126695409|ref|YP_001090295.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9301]
 gi|126542452|gb|ABO16694.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9301]
          Length = 449

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +    VP   G   ++S+V  A      +  P+ ++K+    GGRG  R  E   +
Sbjct: 119 AKETMEAVGVPTVPGSKGLLSNVDEAYKLADDIGYPV-IIKATAGGGGRGM-RLVENSDN 176

Query: 66  SKGGVRVESSLKSVI 80
            +   +         
Sbjct: 177 LEKMFKAAQGEAEAA 191


>gi|56609589|gb|AAW03322.1| hypothetical protein [Cystobacter fuscus]
          Length = 1075

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 47/207 (22%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L+ K  +   +  V  S   A    + +  P+ V  S +  G   +  + +   +    
Sbjct: 680 QLIEKLGLTQPENGVARSHEEAYRVAQRIGYPVMVRPSYVLGGRAMEVVYDQQSLERYMR 739

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             V +S +                          + V ++       E+ L L+ DRT  
Sbjct: 740 EAVSASPE--------------------------HPVLIDRFLKEAIEVDLDLVADRTGA 773

Query: 130 MVAFIASTQGGM--DIEEVAKDYPQKIFKLL---IDP-LIGVTSEDVASLCDMLELQGQA 183
           ++       GG+   +EE           L    + P L+    +   +L   L + G  
Sbjct: 774 VLV------GGVLEHVEEAGVHSGDAACTLPPHSLSPDLVERMKDQAMALAKELGVVGLM 827

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINP 210
            +        +Y         +LE+NP
Sbjct: 828 NVQFAIQGKKIY---------ILEVNP 845


>gi|295399740|ref|ZP_06809721.1| carbamoyl-phosphate synthase, large subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978143|gb|EFG53740.1| carbamoyl-phosphate synthase, large subunit [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 1064

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +P  +G    SV  A    K +  P+ V  S +  G
Sbjct: 679 IPKPQGKTAFSVEEAVRIAKEIGYPVLVRPSYVLGG 714


>gi|291557013|emb|CBL34130.1| D-alanine--D-alanine ligase [Eubacterium siraeum V10Sc8a]
          Length = 397

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 21/123 (17%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y  K + +   +PV  G VI     A+ A          VK+ I A        K +   
Sbjct: 143 YVMKTVFKDNGIPVLDGTVIHISDYAKDA--------DAVKADIKAKIAYPLIVKPINLG 194

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           S  G+ +  + + +   +                    + + VE     L+E+  S+  D
Sbjct: 195 SSVGIMIAHNDEQLDEALDNAFTYA-------------SKLLVEPAITNLKEINCSVCGD 241

Query: 126 RTS 128
             +
Sbjct: 242 YAT 244


>gi|289628117|ref|ZP_06461071.1| hypothetical protein PsyrpaN_23798 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|330871268|gb|EGH05977.1| urea amidolyase-like protein [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 768

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 34/212 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQARI 185
              ++A       G+    V +   + + +    P   +       L    ++L      
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEET---PAPNLPDGMAEELCAAAIKLARAVNY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                   ++ +  D+    LE+N  + +++G
Sbjct: 268 RSAGTVEFVFDS-EDQRFYFLEVNTRLQVEHG 298


>gi|229822921|ref|ZP_04448991.1| hypothetical protein GCWU000282_00213 [Catonella morbi ATCC 51271]
 gi|229787734|gb|EEP23848.1| hypothetical protein GCWU000282_00213 [Catonella morbi ATCC 51271]
          Length = 411

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 22/119 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++ KY +P AK    S   AA+  +     P+ V+K+   A G+             
Sbjct: 102 SKQMMSKYQIPTAKHESFSDYEAAKQYLAQQATPI-VLKADGLAAGK------------- 147

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV +  + +     ++ ++         G        V +E+  +      +  + DR
Sbjct: 148 -GVIIAQTQEEAQEALKAMMQEAKFADAGG-------SVVIEEFLEGEEFSLMCFVSDR 198


>gi|229512727|ref|ZP_04402195.1| phosphoribosylamine--glycine ligase [Vibrio cholerae TMA 21]
 gi|229350237|gb|EEO15189.1| phosphoribosylamine--glycine ligase [Vibrio cholerae TMA 21]
          Length = 442

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 122 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 167 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 218

Query: 129 GMVA 132
            +  
Sbjct: 219 VLPM 222


>gi|218295540|ref|ZP_03496353.1| carbamoyl-phosphate synthase, large subunit [Thermus aquaticus
           Y51MC23]
 gi|218244172|gb|EED10698.1| carbamoyl-phosphate synthase, large subunit [Thermus aquaticus
           Y51MC23]
          Length = 1030

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 15/79 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L ++  +P  +G V  S   A    K +  PL    S +  G                 
Sbjct: 675 RLCQRLGIPQPEGRVAKSPEEALELAKEVGFPLLARPSYVLGG---------------RA 719

Query: 70  VRVESSLKSVISDIREILG 88
           +RV  S + +   + E+ G
Sbjct: 720 MRVLKSQEELKRYLEEVYG 738



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 33/167 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +RK  + V +G +++SV       + +  P+ V  S    G               G  +
Sbjct: 136 MRKIGLEVPRGKMVASVEEGLHFAREVGYPVVVRPSFTLGG------------TGGGIAK 183

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
            E  LK V++               G   S V+   VE+     +E  L ++ D  +  V
Sbjct: 184 DEGELKEVLA--------------RGLALSPVHTALVEESVLGWKEFELEVMRD-HADTV 228

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             I S      IE V          + + P   ++  +   + D  +
Sbjct: 229 VIITS------IENVDPMGVHTGDSITVAPAQTLSDVEYQRMRDAAK 269


>gi|229541904|ref|ZP_04430964.1| urea carboxylase [Bacillus coagulans 36D1]
 gi|229326324|gb|EEN91999.1| urea carboxylase [Bacillus coagulans 36D1]
          Length = 1200

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 82/262 (31%), Gaps = 33/262 (12%)

Query: 8   AKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----------- 55
           A+ + RK  VP+  G  +I+++  A      +  P+ ++KS    GG G           
Sbjct: 119 ARNMARKAGVPLLPGTDLITTLEDAVEQAAQIGYPV-ILKSTAGGGGIGMRICDDEAALR 177

Query: 56  ---KGRFKELPADSKG-GVRVESSLKSVISDIREILGSTLITKQTGPTG----SRVNCVY 107
              K       ++ K  GV +E  +        +I G+                R N   
Sbjct: 178 KSFKAVRHLASSNFKNDGVYLEKYIAKARHVEVQIFGNRFGEVTALGERDCSLQRRNQKV 237

Query: 108 VED--GADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165
           +E+    ++ + +  ++LV            + G ++        P  +    ++    +
Sbjct: 238 IEESPAPNLPQHVRAAMLVSAKKLAATVNYRSAGTVEF----LYDPDTLSFFFLEVNTRL 293

Query: 166 TSED-VASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
             E  V      ++L      +  D    L   F       ++            R    
Sbjct: 294 QVEHGVTEEVLGIDLVEWMVKEAADELKYLDTLFGKPKGHSIQARIYAEDCYHDFRPGAG 353

Query: 225 KISFDDNALYRHLDIQE--LRD 244
           +I   D A++      E  LRD
Sbjct: 354 RI---DKAVFSEKARVETWLRD 372


>gi|121535612|ref|ZP_01667418.1| carbamoyl-phosphate synthase, large subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121305782|gb|EAX46718.1| carbamoyl-phosphate synthase, large subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 1073

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K N+P  +G  ++SV  A +  + +  P+ V  S +  G
Sbjct: 672 QLLEKLNIPRPRGASVTSVDQAITKAREIGYPVVVRPSYVLGG 714


>gi|17546910|ref|NP_520312.1| phosphoribosylamine--glycine ligase [Ralstonia solanacearum
           GMI1000]
 gi|20139461|sp|Q8XXC4|PUR2_RALSO RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|17429210|emb|CAD15898.1| probable phosphoribosylamine--glycine ligase (gars)
           (glycinamideribonucleotide synthetase)
           (phosphoribosylglycinamide synthetase) protein
           [Ralstonia solanacearum GMI1000]
          Length = 422

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P AK     +   A + +     P+ V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTAKYQTFGNAAEAHAYVDREGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+         +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMTLEEAHGA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +A++Q 
Sbjct: 203 D--VVAMATSQD 212


>gi|300023326|ref|YP_003755937.1| carbamoyl-phosphate synthase, large subunit [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525147|gb|ADJ23616.1| carbamoyl-phosphate synthase, large subunit [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 1091

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 44/163 (26%), Gaps = 37/163 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R+      +   +  +  +   A  A++ +  P  +         R          
Sbjct: 129 RQLFREAMKTIGLETPRSKLAHTREEAADALEHVGLPAII---------RPSFTLGGTGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +         L ++  T            + VE+     +E  + ++ 
Sbjct: 180 G------IAYNREEFFEIAERGLDASPTT-----------QILVEESVLGWKEFEMEVVR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           D+    +           IE V          + + P + +T 
Sbjct: 223 DKADNCIII-------CSIENVDPMGVHTGDSITVAPALTLTD 258



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 65/207 (31%), Gaps = 37/207 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KAL+ K N+   K  +  +   A +  +T+  P+ +  S +  GGR      +     + 
Sbjct: 689 KALIEKLNLKQPKSGIAKTPGEARAVAETIGYPVVIRPSYVL-GGRAMEIVHDGSEVDRY 747

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             R+ ++L      +       LI              Y+ D  ++  +  LS   D   
Sbjct: 748 VTRLSATLDRPSELVVSERRPLLIDS------------YLTDAVEVDVDC-LSDGKDTFV 794

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL-----IDPLIGVTSEDVASLCDMLELQGQA 183
             +           IEE           L       D +  +       L   L + G  
Sbjct: 795 AGIM--------EHIEEAGIHSGDSACSLPPHSLSADIITEL-ERQARELALALRVVGLM 845

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINP 210
            I           A  D ++ +LE+NP
Sbjct: 846 NIQF---------AIKDGEVFILEVNP 863


>gi|116695380|ref|YP_840956.1| 6-carboxyhexanoate-CoA ligase [Ralstonia eutropha H16]
 gi|113529879|emb|CAJ96226.1| 6-Carboxyhexanoate-CoA ligase [Ralstonia eutropha H16]
          Length = 700

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 73/237 (30%), Gaps = 36/237 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L   + VPVAK VV+     A +A +   G + V+K             +       
Sbjct: 484 AKTLFAGFGVPVAKEVVVDDGAEAMAAAQAFSGNV-VLKI---------LSAEITHKSDV 533

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           GGV V      V S +  +      +     TG       V++      E+ L +   R 
Sbjct: 534 GGVAVNVPPAEVGSRLARM-----ASDVQSATGIAPQRFLVQEMVKAGVEVILGM--HRD 586

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---------- 177
           +   A +    GG+  E       + +         G++ +   ++   L          
Sbjct: 587 ALGTAILL-GMGGVTAELFGDTTLRLL-----PGERGLSRDAALAMIGRLKTAPLLQGFR 640

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLL--EINPLIIMKNGR-LRVLDSKISFDDN 231
                      D      +        L+  E+NP+ ++  G+ +   D       N
Sbjct: 641 GRPKADVEALADAIVAFSRMVATLGDRLVEAEMNPVFVLPEGQGVMAADGVAVLAGN 697


>gi|330835784|ref|YP_004410512.1| acetyl/propionyl-CoA carboxylase [Metallosphaera cuprina Ar-4]
 gi|329567923|gb|AEB96028.1| acetyl/propionyl-CoA carboxylase [Metallosphaera cuprina Ar-4]
          Length = 510

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 66/207 (31%), Gaps = 37/207 (17%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
             K +  +  VP+A G    +SS+  A    + +  P+ V  +                 
Sbjct: 120 DGKRIAVQAGVPIAPGSDGPVSSIDEALKLAERIGYPIMVKAA---------------SG 164

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+    S   +I          L T+  G +      +Y+E  A   R +   L+ 
Sbjct: 165 GGGVGITKIDSPDQLIDAWER--NKRLATQAFGKSD-----LYIEKAAVNPRHIEFQLIG 217

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D+    V          + E   +   QK+ +    P   +T E+ + + + +   G   
Sbjct: 218 DKYGNYVV-------AWERECTIQRRNQKLIEEAPSPA--ITMEERSKMFEPIMKYGHIL 268

Query: 185 IDGGDLFPNLYKAFCD--KDMSLLEIN 209
                        F D  ++   LE+N
Sbjct: 269 NYFT--LGTFETVFSDATREFYFLELN 293


>gi|288918224|ref|ZP_06412579.1| carbamoyl-phosphate synthase, large subunit [Frankia sp. EUN1f]
 gi|288350394|gb|EFC84616.1| carbamoyl-phosphate synthase, large subunit [Frankia sp. EUN1f]
          Length = 1091

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L K N+P     V +S   A +    +  P+ V  S +  GGRG
Sbjct: 673 QVLDKANLPSPPHGVATSYAEARTVADRIGYPVLVRPSYVL-GGRG 717


>gi|296122831|ref|YP_003630609.1| alpha-L-glutamate ligase, RimK family [Planctomyces limnophilus DSM
           3776]
 gi|296015171|gb|ADG68410.1| alpha-L-glutamate ligase, RimK family [Planctomyces limnophilus DSM
           3776]
          Length = 324

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L    +PV    V  +   A  A + L   + V+K    + GRG
Sbjct: 131 LAHAGLPVPATFVCETAQEALQAFEKLGRNV-VLKPLFGSEGRG 173


>gi|251794906|ref|YP_003009637.1| phosphoribosylamine/glycine ligase [Paenibacillus sp. JDR-2]
 gi|247542532|gb|ACS99550.1| phosphoribosylamine/glycine ligase [Paenibacillus sp. JDR-2]
          Length = 422

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LLRKY++P AK    +    A + ++    P+ V+K+   A G+              
Sbjct: 107 KDLLRKYDIPTAKYETFTDYETALTYLREQSVPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV V  S++     ++E     ++ K  G  G   N + +E+  +
Sbjct: 152 GVTVAYSMEEAEKALKE----AMVDKVFGEAG---NQIVIEEFLE 189


>gi|72163412|ref|YP_291069.1| phosphoribosylamine--glycine ligase [Thermobifida fusca YX]
 gi|71917144|gb|AAZ57046.1| phosphoribosylamine--glycine ligase [Thermobifida fusca YX]
          Length = 424

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V  S      A+  L GP YVVK    A G+G
Sbjct: 106 AKEVMAAAGVPTAEARVCRSASQVSQAL-DLFGPPYVVKDDGLAAGKG 152


>gi|88799452|ref|ZP_01115029.1| Phosphoribosylamine-glycine ligase [Reinekea sp. MED297]
 gi|88777762|gb|EAR08960.1| Phosphoribosylamine-glycine ligase [Reinekea sp. MED297]
          Length = 426

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 19/95 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A   V +  + A + I+    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTAFYGVFTDENEAIAYIREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           GV +  + +     +R++L       + G  G+RV
Sbjct: 154 GVILAQTEQEAEEAVRDML----SGNRFGDAGARV 184


>gi|310779975|ref|YP_003968307.1| phosphoribosylamine--glycine ligase [Ilyobacter polytropus DSM
           2926]
 gi|309749298|gb|ADO83959.1| phosphoribosylamine--glycine ligase [Ilyobacter polytropus DSM
           2926]
          Length = 416

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  A   + +    A++ + T+  P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYGVKTAAYEIFTDADKAKAYLDTINFPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + + +K  I  + +I    ++ K+    G   N V +E+  + +     S+L    
Sbjct: 152 -GVLICADIKEGIEAVNDI----MVDKKFSDAG---NEVVIEEFLEGVE---ASILSITD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S  +    S +    I E
Sbjct: 201 SKQIVSFISAKDHKKIGE 218


>gi|295396982|ref|ZP_06807101.1| carbamoyl-phosphate synthase, large subunit [Aerococcus viridans
           ATCC 11563]
 gi|294974782|gb|EFG50490.1| carbamoyl-phosphate synthase, large subunit [Aerococcus viridans
           ATCC 11563]
          Length = 1059

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+     PV    ++ +V  A      +  P+ V  +    G  G     +   +   
Sbjct: 133 KNLMTSIGQPVPDSTIVHTVDEAVDFANEIGYPIIVRPAFTMGGSGGGICEDQASLEKIV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
              +  S  +     + I G   I  +    G+ V  V 
Sbjct: 193 KNGLILSPVTQCLIEKSIAGYQEIEYEVMRDGAGVAKVI 231


>gi|294788690|ref|ZP_06753932.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
 gi|294483567|gb|EFG31252.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
          Length = 392

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VAKG V S+   A+   K L  P+ +
Sbjct: 119 QMKEVFRKTGLKVAKGRVFSNDEDAKKLAKELKFPIII 156


>gi|229524778|ref|ZP_04414183.1| phosphoribosylamine--glycine ligase [Vibrio cholerae bv. albensis
           VL426]
 gi|229338359|gb|EEO03376.1| phosphoribosylamine--glycine ligase [Vibrio cholerae bv. albensis
           VL426]
          Length = 442

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 122 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 167 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 218

Query: 129 GMVA 132
            +  
Sbjct: 219 VLPM 222


>gi|229549015|ref|ZP_04437740.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis ATCC 29200]
 gi|255971784|ref|ZP_05422370.1| acetyl-CoA carboxylase [Enterococcus faecalis T1]
 gi|256958098|ref|ZP_05562269.1| acetyl-CoA carboxylase [Enterococcus faecalis DS5]
 gi|257079986|ref|ZP_05574347.1| acetyl-CoA carboxylase [Enterococcus faecalis JH1]
 gi|257091101|ref|ZP_05585462.1| acetyl-CoA carboxylase biotin carboxylase [Enterococcus faecalis
           CH188]
 gi|294779510|ref|ZP_06744905.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis PC1.1]
 gi|300861157|ref|ZP_07107244.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|307268314|ref|ZP_07549695.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX4248]
 gi|307276176|ref|ZP_07557307.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX2134]
 gi|312904371|ref|ZP_07763532.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0635]
 gi|312951130|ref|ZP_07770035.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0102]
 gi|229305808|gb|EEN71804.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis ATCC 29200]
 gi|255962802|gb|EET95278.1| acetyl-CoA carboxylase [Enterococcus faecalis T1]
 gi|256948594|gb|EEU65226.1| acetyl-CoA carboxylase [Enterococcus faecalis DS5]
 gi|256988016|gb|EEU75318.1| acetyl-CoA carboxylase [Enterococcus faecalis JH1]
 gi|256999913|gb|EEU86433.1| acetyl-CoA carboxylase biotin carboxylase [Enterococcus faecalis
           CH188]
 gi|294453389|gb|EFG21796.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis PC1.1]
 gi|295113747|emb|CBL32384.1| biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase
           subunit alpha [Enterococcus sp. 7L76]
 gi|300850196|gb|EFK77946.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|306507170|gb|EFM76309.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX2134]
 gi|306515340|gb|EFM83874.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX4248]
 gi|310630906|gb|EFQ14189.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0102]
 gi|310632270|gb|EFQ15553.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0635]
 gi|315036283|gb|EFT48215.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0027]
 gi|315148840|gb|EFT92856.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX4244]
 gi|315154130|gb|EFT98146.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0031]
 gi|315159007|gb|EFU03024.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0312]
 gi|315162822|gb|EFU06839.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0645]
 gi|315576868|gb|EFU89059.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0630]
 gi|323481742|gb|ADX81181.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecalis
           62]
 gi|327536033|gb|AEA94867.1| acetyl-CoA carboxylase subunit A [Enterococcus faecalis OG1RF]
 gi|329577185|gb|EGG58655.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX1467]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|167038556|ref|YP_001666134.1| D-alanine--D-alanine ligase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116951|ref|YP_004187110.1| D-alanine--D-alanine ligase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166857390|gb|ABY95798.1| D-alanine--D-alanine ligase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319930042|gb|ADV80727.1| D-alanine--D-alanine ligase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 325

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 65/225 (28%), Gaps = 36/225 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++  + +P  K V+  +     S    L  PL+V        GRG     E       
Sbjct: 105 KDIVASHGLPTPKYVIAENPQEIPSV-DHLKFPLFV----KPISGRGSAGIDEEN----- 154

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +      +   + +I      T++ G          +E+  +  +E+ + ++  +  
Sbjct: 155 ---IIYDKDKLPQVVSKI------TEKIG------QAALIEEFIE-GKEVTVGIIGYKHP 198

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQ-KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            ++  +      +            +I K  I+       ++V        L     ++ 
Sbjct: 199 QVLPLLEVGYNNVKTNTYEHKMFDNEIIKCPIEV-----PKEVEEKIKETALNIYKVLNA 253

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLI----IMKNGRLRVLDSKISF 228
            D          D     LE+N           G   V    + +
Sbjct: 254 KDFARIDMILSKDNVPYFLELNTFAGLTMSSSKGEKHVHHGYMGY 298


>gi|67923410|ref|ZP_00516889.1| Acetyl-CoA carboxylase, biotin carboxylase [Crocosphaera watsonii
           WH 8501]
 gi|67854745|gb|EAM50025.1| Acetyl-CoA carboxylase, biotin carboxylase [Crocosphaera watsonii
           WH 8501]
          Length = 452

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           AK  ++K  VP   G   ++ S   A +  + +  P+ ++K+    GGRG    +E
Sbjct: 121 AKKTMQKAGVPTVPGSWGLLQSEEEALNVARDIGYPV-MIKATAGGGGRGMRLVRE 175


>gi|325265118|ref|ZP_08131844.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. D5]
 gi|324029522|gb|EGB90811.1| carbamoyl-phosphate synthase, large subunit [Clostridium sp. D5]
          Length = 1072

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + +A+  V  +V  A      L  P+                 +        
Sbjct: 133 KKAMNELGIEMARSEVAYTVEEALDIADDLGYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +   + +     L ++L           V  V VE+      EL L ++ D+ +
Sbjct: 178 GGGLVYNKDELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVVRDKEN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 NMITV 231



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 27/69 (39%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + ++ K  +P+ +  +  +V  A S  + +  P+ V  S +  G   +  + +    +  
Sbjct: 672 REMMEKLQIPMPESGMAVNVEEAISIAQNIGYPVMVRPSYVLGGRGMEVVYDDKSMANYM 731

Query: 69  GVRVESSLK 77
              V  +  
Sbjct: 732 AAAVGVTPD 740


>gi|257087779|ref|ZP_05582140.1| acetyl-CoA carboxylase [Enterococcus faecalis D6]
 gi|257421572|ref|ZP_05598562.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis X98]
 gi|256995809|gb|EEU83111.1| acetyl-CoA carboxylase [Enterococcus faecalis D6]
 gi|257163396|gb|EEU93356.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis X98]
 gi|315026554|gb|EFT38486.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX2137]
 gi|315156467|gb|EFU00484.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0043]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|256763439|ref|ZP_05504019.1| acetyl-CoA carboxylase [Enterococcus faecalis T3]
 gi|256684690|gb|EEU24385.1| acetyl-CoA carboxylase [Enterococcus faecalis T3]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|255974782|ref|ZP_05425368.1| acetyl-CoA carboxylase [Enterococcus faecalis T2]
 gi|256960936|ref|ZP_05565107.1| acetyl-CoA carboxylase [Enterococcus faecalis Merz96]
 gi|257420201|ref|ZP_05597195.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecalis
           T11]
 gi|293382475|ref|ZP_06628410.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis R712]
 gi|293387141|ref|ZP_06631702.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis S613]
 gi|307280572|ref|ZP_07561620.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0860]
 gi|312906530|ref|ZP_07765532.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis DAPTO 512]
 gi|312910475|ref|ZP_07769321.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis DAPTO 516]
 gi|255967654|gb|EET98276.1| acetyl-CoA carboxylase [Enterococcus faecalis T2]
 gi|256951432|gb|EEU68064.1| acetyl-CoA carboxylase [Enterococcus faecalis Merz96]
 gi|257162029|gb|EEU91989.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecalis
           T11]
 gi|291080159|gb|EFE17523.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis R712]
 gi|291083412|gb|EFE20375.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis S613]
 gi|306503938|gb|EFM73155.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0860]
 gi|310627473|gb|EFQ10756.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis DAPTO 512]
 gi|311289247|gb|EFQ67803.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis DAPTO 516]
 gi|315151736|gb|EFT95752.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0012]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|229509299|ref|ZP_04398782.1| phosphoribosylamine--glycine ligase [Vibrio cholerae B33]
 gi|229606439|ref|YP_002877087.1| phosphoribosylamine--glycine ligase [Vibrio cholerae MJ-1236]
 gi|229353614|gb|EEO18551.1| phosphoribosylamine--glycine ligase [Vibrio cholerae B33]
 gi|229369094|gb|ACQ59517.1| phosphoribosylamine--glycine ligase [Vibrio cholerae MJ-1236]
          Length = 442

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 39/171 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 122 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 167 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 218

Query: 129 GMVAFIASTQ------------GGMDIEEVAK----DYPQKIFKLLIDPLI 163
            +    +               GGM     A     D   ++ + +IDP +
Sbjct: 219 VLPMATSQDHKRVGDADTGPNTGGMGAYSPAPVVTQDVHDRVMREVIDPTV 269


>gi|226952634|ref|ZP_03823098.1| phosphoribosylamine--glycine ligase [Acinetobacter sp. ATCC 27244]
 gi|294649947|ref|ZP_06727339.1| phosphoribosylamine--glycine ligase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|226836623|gb|EEH69006.1| phosphoribosylamine--glycine ligase [Acinetobacter sp. ATCC 27244]
 gi|292824176|gb|EFF82987.1| phosphoribosylamine--glycine ligase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 428

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L+++N+P A   V + V AA++ ++    P+ V+K+   A G+             
Sbjct: 108 AKHFLKRHNIPTAFYDVFTEVDAAKAYVEKNGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  + +     I ++L       + G  G   + V +E         ++ ++
Sbjct: 154 -GVIVAMTNQEAFDAIDDMLA----GNKFGDAG---SRVVIEQFLAGEEASFICMI 201


>gi|225619452|ref|YP_002720694.1| L-lactate dehydrogenase [Brachyspira hyodysenteriae WA1]
 gi|225214271|gb|ACN83005.1| L-lactate dehydrogenase [Brachyspira hyodysenteriae WA1]
          Length = 723

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 55/170 (32%), Gaps = 25/170 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +   +K NVP      + +   A  A K L  P+ VVK   + G RG  +        + 
Sbjct: 112 RERFKKNNVPQPNFFPVWNYEEAMEAYKHLNTPV-VVKPADNMGARGVMKVSN-----ES 165

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            +    +     S   E++   +     GP  S        D      E++++ + DR  
Sbjct: 166 DILSAFNRAKSASPSGEVI---MEEFMDGPELSI-------DMLIYNDEIHVTGVADRII 215

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
               F           E     P  + K  ID  I V    + +L   + 
Sbjct: 216 EFPPFFI---------ETGHIMPSALEKEKIDDAINVMKAGIKALNLKIG 256


>gi|198275723|ref|ZP_03208254.1| hypothetical protein BACPLE_01898 [Bacteroides plebeius DSM 17135]
 gi|198271352|gb|EDY95622.1| hypothetical protein BACPLE_01898 [Bacteroides plebeius DSM 17135]
          Length = 503

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 24/112 (21%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + SV  A+     +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSVEEAKEICNKIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            S   V         +T  ++     G   + VY+E   +    +   +L D
Sbjct: 172 HSEDEVEEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGD 216


>gi|73670652|ref|YP_306667.1| 30S ribosomal protein S6P modification protein [Methanosarcina
           barkeri str. Fusaro]
 gi|72397814|gb|AAZ72087.1| SSU ribosomal protein S6P modification protein [Methanosarcina
           barkeri str. Fusaro]
          Length = 329

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 58/172 (33%), Gaps = 17/172 (9%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y A  LL K  +PV K V +  + AA   I        V+K      G+   R +     
Sbjct: 115 YHASYLLAKAGLPVPKTVAVQDMEAALKVISRFG--DAVIKPVFGYKGKDIARVRNGEVR 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                   SS +S ++ + E  G   I +     G  +    V DG  I      ++   
Sbjct: 173 FSDRKIEPSSPESTLNQLLEERGMLYIQEFIENPGRDIRAFVV-DGKAIG-----AIYRK 226

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL---------IDPLIGVTSE 168
             SG      S  G  D   + ++  +   K           +D + G+T E
Sbjct: 227 AASGSWVNNLSQGGNADRCVLTEEQKEIAEKAALAVNTTFAGVDIIEGLTDE 278


>gi|29377343|ref|NP_816497.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis V583]
 gi|227554300|ref|ZP_03984347.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis HH22]
 gi|229544800|ref|ZP_04433525.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis TX1322]
 gi|256854165|ref|ZP_05559530.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis T8]
 gi|29344810|gb|AAO82567.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecalis
           V583]
 gi|227176590|gb|EEI57562.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis HH22]
 gi|229310072|gb|EEN76059.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis TX1322]
 gi|256711108|gb|EEU26151.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecalis T8]
 gi|315030781|gb|EFT42713.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX4000]
 gi|315575228|gb|EFU87419.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0309B]
 gi|315582412|gb|EFU94603.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecalis TX0309A]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L++K  VPV  G   VI SV  A +  + +  P+
Sbjct: 119 ARQLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPV 155


>gi|323698665|ref|ZP_08110577.1| CoA-binding domain protein [Desulfovibrio sp. ND132]
 gi|323458597|gb|EGB14462.1| CoA-binding domain protein [Desulfovibrio desulfuricans ND132]
          Length = 715

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 14/133 (10%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           N+ E +A+ +LR Y + +A   + ++   A +  K + G + +                 
Sbjct: 501 NLVETEARHVLRCYGLDIADDYLATTADEAAAFYKKIGGKVVM----------KIVSPDI 550

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L     GGV +    +   +  R      +   +T   G+ +  V +        E  + 
Sbjct: 551 LHKTDAGGVALNIDSE---AKARSAFEQLVKNGRTYKAGADIFGVMLTPMLPGGVECIIG 607

Query: 122 LLVDRTSGMVAFI 134
              D  +     +
Sbjct: 608 SSHD-NTFGPTVM 619


>gi|294629733|ref|ZP_06708293.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces sp. e14]
 gi|292833066|gb|EFF91415.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces sp. e14]
          Length = 415

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 79/255 (30%), Gaps = 53/255 (20%)

Query: 16  NVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
            VP  +  +V      A  A +    P+ V+K+ +  G  GK            GV V  
Sbjct: 150 GVPCPRHRIVADPADVAAFAAEGEGFPV-VLKT-VRGGYDGK------------GVWVVD 195

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSGMVA 132
           S +      R               G  V     E+  D +REL  +++      +    
Sbjct: 196 SAEEAADPFR--------------AGVPV---LAEEKVDFVRELAANVVRSPHGQAVAYP 238

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
            + S Q     + V    P    +L +        E   ++   L + G   ++      
Sbjct: 239 VVESRQVNGVCDTVIAPAPDLSEELAL-----RAEEMALTIAKELGVVGHLAVE------ 287

Query: 193 NLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDS 250
                F  +D  +L +N L +    +G   +  +  S   N +   LD+  L D      
Sbjct: 288 ----LFQTRDGRIL-VNELAMRPHNSGHWSMDGAITSQFANHVRAVLDLP-LGDPRPRAK 341

Query: 251 REIEAKQHNLSYIAL 265
             + A      Y  +
Sbjct: 342 WTVMANVLGGDYPDM 356


>gi|167045616|gb|ABZ10266.1| putative ATP-grasp domain protein [uncultured marine crenarchaeote
           HF4000_APKG10I20]
          Length = 220

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+K  +P  +  +  S  AA  +++    P  ++K  + + GR   +  +  + ++G +
Sbjct: 95  LLQKAGIPTPEATIAFSKEAAMQSLEKSGYPK-IIKPTVGSWGRMVSKLNDRDS-AEGVI 152

Query: 71  RVESSLKSVIS--DIREILGSTLITKQTGPTGSRV 103
               S+        ++E++  T    +    G  V
Sbjct: 153 ESRESMPPAYQMYFLKELVQRTPTDIRAIVIGEHV 187


>gi|6729667|emb|CAB67718.1| putative carbamoyl-phosphate-synthetase [Streptomyces rochei]
          Length = 410

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 26/124 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+LR+  + V       SV  A  A+  +  P  +               K        G
Sbjct: 111 AILRRAWLDVPTFATAESVGEAVQAVAQIGLPAVI---------------KPCDQTGSLG 155

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    S   V     E L       +  P+G  V    +E+  +       + +VD    
Sbjct: 156 VLKVESPDRVRELAEEAL-------RLSPSGRIV----IEEFLEGTEHTLAAFMVDGELR 204

Query: 130 MVAF 133
              F
Sbjct: 205 RFGF 208


>gi|269104489|ref|ZP_06157185.1| protein acetyltransferase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161129|gb|EEZ39626.1| protein acetyltransferase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 899

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 26/141 (18%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGA--------------------PA-NFLDVG 300
           + L G  +  + NG G A+  +D +   GG                     PA N +D+ 
Sbjct: 297 VPLRGERLAIITNGGGPAIMAVDSLSERGGKLAQLSSTTLHQLKKQLPNYWPASNPIDLL 356

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G A  ++       +        +LI +    I       + ++  +K+        +  
Sbjct: 357 GDATIERYEHTINTLLDSDEADALLIMHTPSAIAPSQQTAERLVQTLKQHPNIKKFNVLS 416

Query: 360 EGANVDIG---NRLIAESGLN 377
                  G     + A++G  
Sbjct: 417 NWTGEYEGQVARDIFAQAGFP 437



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 90/268 (33%), Gaps = 46/268 (17%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE Q   +L+ Y        + +    A    + +  P+ V         + +    E  
Sbjct: 502 HEVQ--PILKGYGFKTLPTWLANDAVEAIHIAEQIGYPVAV---------KLRSPDIEYK 550

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYLSL 122
           ++  G +      + V S  + +L    I   T    G  V  +    G    +EL +++
Sbjct: 551 SEVHGVMLHLRDAQEVESAAQAMLERVNIDYPTAQIDGLLVQRMANRAG---AQELRVAV 607

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLE 178
             D   G V F+   +  M+                 D  +G+   ++A     + D L+
Sbjct: 608 RNDPIFGPVIFLG--EELMNWNCYQ------------DSAVGLPPLNMALARYMIIDALK 653

Query: 179 ---------LQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                    L              + +   D  ++  L+I+PL+      L ++D+ ++ 
Sbjct: 654 SQKIKQRSTLVPIDIDALCSFLVTVSQIIIDCPNIESLDIHPLLA-NGPELTIIDASMTL 712

Query: 229 DDNALYRHLDIQELRDVSEEDSREIEAK 256
             NA    +    +R   +E  + +E K
Sbjct: 713 --NADTNQIPRLAIRPYPKELEQWVELK 738


>gi|228987090|ref|ZP_04147215.1| Pyruvate carboxylase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228772684|gb|EEM21125.1| Pyruvate carboxylase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 1148

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRNSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|260642518|ref|ZP_05416178.2| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           finegoldii DSM 17565]
 gi|260621779|gb|EEX44650.1| phosphoribosylglycinamide formyltransferase 2 [Bacteroides
           finegoldii DSM 17565]
          Length = 389

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 29/147 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     ++   + A   +  P  VVK  + + G+G+             V+    
Sbjct: 116 GLKTAKYFYAKTLEELKEAADKIGFPC-VVKPLMSSSGKGQSL-----------VKSADE 163

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+                  +G  G  +  + +E+      E  ++LL            
Sbjct: 164 LEHAWEY-----------GCSGSRGD-IRELIIEEFIKFDSE--ITLLTVTQKNGPTLFC 209

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPL 162
              G +   +   DY +      IDP 
Sbjct: 210 PPIGHV---QKGGDYRESFQPAHIDPA 233


>gi|153830384|ref|ZP_01983051.1| phosphoribosylamine--glycine ligase [Vibrio cholerae 623-39]
 gi|148874118|gb|EDL72253.1| phosphoribosylamine--glycine ligase [Vibrio cholerae 623-39]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVRKKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|147781717|emb|CAN69740.1| hypothetical protein VITISV_017584 [Vitis vinifera]
          Length = 1204

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      V      + +++        ++     +++     GG G G       
Sbjct: 210 RELFKQAMENIGVKTPPSGIGTTLDECMEIANSIGEFPLIIRPAFTLGGTGGG------- 262

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +   +  +  L ++L +            V VE      +E  L ++ 
Sbjct: 263 -------IAYNREEFEAICKSGLAASLTS-----------QVLVEKSLLGWKEYELEVMR 304

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE +          + + P   +T ++   L D
Sbjct: 305 D-LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 348


>gi|229506928|ref|ZP_04396436.1| phosphoribosylamine--glycine ligase [Vibrio cholerae BX 330286]
 gi|229516245|ref|ZP_04405693.1| phosphoribosylamine--glycine ligase [Vibrio cholerae RC9]
 gi|229346671|gb|EEO11641.1| phosphoribosylamine--glycine ligase [Vibrio cholerae RC9]
 gi|229356033|gb|EEO20952.1| phosphoribosylamine--glycine ligase [Vibrio cholerae BX 330286]
          Length = 442

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 39/171 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 122 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 167 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 218

Query: 129 GMVAFIASTQ------------GGMDIEEVAK----DYPQKIFKLLIDPLI 163
            +    +               GGM     A     D   ++ + +IDP +
Sbjct: 219 VLPMATSQDHKRVGDADTGPNTGGMGAYSPAPVVTQDVHDRVMREVIDPTV 269


>gi|224118754|ref|XP_002331438.1| predicted protein [Populus trichocarpa]
 gi|290463113|sp|B9N843|ACCC2_POPTR RecName: Full=Biotin carboxylase 2, chloroplastic; AltName:
           Full=Acetyl-CoA carboxylase subunit A 2; Short=ACC;
           Flags: Precursor
 gi|222873652|gb|EEF10783.1| predicted protein [Populus trichocarpa]
          Length = 526

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K NVP   G   ++ S   A      +  P+ ++K+    GGRG          
Sbjct: 184 ARETMKKANVPTVPGSDGLLQSTEEAVKLASEIGYPV-MIKATAGGGGRGM-------RL 235

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
           +K        L+   S+     G+ 
Sbjct: 236 AKEPDEFVKLLQQAKSEAAAAFGND 260


>gi|254479193|ref|ZP_05092540.1| phosphoribosylamine--glycine ligase [Carboxydibrachium pacificum
           DSM 12653]
 gi|214034856|gb|EEB75583.1| phosphoribosylamine--glycine ligase [Carboxydibrachium pacificum
           DSM 12653]
          Length = 419

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 22/108 (20%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y AK ++ KY +P  +         A   +K    P+ V+K+   A G+           
Sbjct: 106 YFAKQIMAKYEIPTGRFKAFDRYQEALKFLKETWYPV-VIKADGLAQGK----------- 153

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +           +E+L   +  +  GP+G  V    VE+   
Sbjct: 154 ---GVFIVRDFIE----AKEVLDLMMKKRVFGPSGDIV---IVEEMLY 191


>gi|71737766|ref|YP_276566.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558319|gb|AAZ37530.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 450

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 127 KDFLARHKIPTADYQNFTEIEPALAYLREEGAPI-VIKADGLAAGK-------------- 171

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 172 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 223

Query: 129 GMVA 132
            +  
Sbjct: 224 VLPM 227


>gi|52141541|ref|YP_085288.1| pyruvate carboxylase [Bacillus cereus E33L]
 gi|51975010|gb|AAU16560.1| pyruvate carboxylase [Bacillus cereus E33L]
          Length = 1148

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRNSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|47565822|ref|ZP_00236861.1| pyruvate carboxylase [Bacillus cereus G9241]
 gi|47557102|gb|EAL15431.1| pyruvate carboxylase [Bacillus cereus G9241]
          Length = 1148

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRNSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|291562459|emb|CBL41275.1| phosphoribosylamine--glycine ligase [butyrate-producing bacterium
           SS3/4]
          Length = 425

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A   ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYETFTDPEKALEYLETAKMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +L+     ++ +    ++ K+ G  G   + + +E+         +S+L    
Sbjct: 152 -GVLICQTLEEAKEGVKTL----MMDKKFGSAG---DEIVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
             +V  ++S Q 
Sbjct: 201 GNIVKIMSSAQD 212


>gi|229521008|ref|ZP_04410429.1| phosphoribosylamine--glycine ligase [Vibrio cholerae TM 11079-80]
 gi|229527229|ref|ZP_04416622.1| phosphoribosylamine--glycine ligase [Vibrio cholerae 12129(1)]
 gi|229335237|gb|EEO00721.1| phosphoribosylamine--glycine ligase [Vibrio cholerae 12129(1)]
 gi|229341893|gb|EEO06894.1| phosphoribosylamine--glycine ligase [Vibrio cholerae TM 11079-80]
          Length = 442

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 122 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 166

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 167 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 218

Query: 129 GMVA 132
            +  
Sbjct: 219 VLPM 222


>gi|229157524|ref|ZP_04285601.1| Pyruvate carboxylase [Bacillus cereus ATCC 4342]
 gi|228625974|gb|EEK82724.1| Pyruvate carboxylase [Bacillus cereus ATCC 4342]
          Length = 1148

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRNSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|187933522|ref|YP_001885307.1| phosphoribosylamine--glycine ligase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187721675|gb|ACD22896.1| phosphoribosylamine--glycine ligase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 416

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+    +SV+ A   ++    P  VVK+   A G+             
Sbjct: 106 SKDFMKKYGVKTAEYATFTSVNEALEYLENCTYPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +  I  +       ++       G     + +E+  + +    LS+ 
Sbjct: 152 -GVIICENKEEAIEAVNTC----MVDDAFNGAGQ---KIVIEEFLEGVEASILSIT 199


>gi|15667251|gb|AAL02364.1| propionyl CoA-carboxylase alpha-subunit [Mus musculus]
          Length = 724

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G   V+     A    + +  P+ +  S                 
Sbjct: 175 ESKLLAKRAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 219

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 220 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 272

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +DP       E   +L   ++     
Sbjct: 273 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDPETRQAMGEQAVALAKAVKYSSAG 329

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 330 TVEFLVDSQKNFY--FLEMNTRLQVEHPVTECITG 362


>gi|15679014|ref|NP_276131.1| carbamoyl-phosphate synthase, large subunit [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622097|gb|AAB85493.1| carbamoyl-phosphate synthase, large subunit [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 828

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 46/265 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +P A   +  S   A +  + +  P+ V  S +  G                 
Sbjct: 433 EVLNKLGIPQAPYGIAKSFEDARAVAERIGYPVLVRPSYVLGG---------------RA 477

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           + +      +   +RE        + +      V+    ED  ++  +  L    D   G
Sbjct: 478 MEIVYDDVELEEYMRE------AVRVSPEHPILVDKFL-EDAIEVDVDA-LCDGTDVYIG 529

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG- 188
            +       G    +      PQ I + +ID +   T      L   LE+ G   I    
Sbjct: 530 GIMEHIEEAGVHSGDSACVIPPQSIPEDIIDTIKEYT----RKLALELEVVGLINIQYAV 585

Query: 189 --DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISFDDNALYRHLDIQELRD- 244
             D  P++Y    + +       P +    G     + +++              +LRD 
Sbjct: 586 KPDSDPSVY--ILEANPRASRTVPFVSKATGVPLAKMAARLMMG----------AKLRDL 633

Query: 245 --VSEEDSREIEAKQHNLSYIALDG 267
               E+D   +  K+    +I L G
Sbjct: 634 GLTEEKDIEHVAVKESVFPFIKLPG 658


>gi|322435502|ref|YP_004217714.1| acetyl-CoA carboxylase, biotin carboxylase [Acidobacterium sp.
           MP5ACTX9]
 gi|321163229|gb|ADW68934.1| acetyl-CoA carboxylase, biotin carboxylase [Acidobacterium sp.
           MP5ACTX9]
          Length = 451

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+  ++K  VP+  G   VI++   A    +++  P+ ++K+    GGRG
Sbjct: 119 ARQTMKKAKVPILPGSDGVIANEDEALEWARSVGYPV-ILKAVAGGGGRG 167


>gi|161510953|ref|YP_089428.2| carbamoyl phosphate synthase large subunit [Mannheimia
           succiniciproducens MBEL55E]
          Length = 1070

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 41/159 (25%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  S   A  A + +  P  +             R       S G
Sbjct: 133 KEAMAKIGLNTPKSFVCHSFDEAWKAQEEVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +     +               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNRDEFQAICER-----------GFEASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIIV-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|150009680|ref|YP_001304423.1| phosphoribosylamine--glycine ligase [Parabacteroides distasonis
           ATCC 8503]
 gi|149938104|gb|ABR44801.1| phosphoribosylamine--glycine ligase [Parabacteroides distasonis
           ATCC 8503]
          Length = 423

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++N+P A  K + + ++    + +++L  P YV+K+   A G+           
Sbjct: 110 AKAFMMRHNIPTARYKSISVENLEEGYAFLESLSAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ ++LG           G     V +E+  D
Sbjct: 158 ---GVLIIDNLEEAKKELGDMLGGMF--------GDASKTVVIEEFLD 194


>gi|330816137|ref|YP_004359842.1| hypothetical protein bgla_1g12080 [Burkholderia gladioli BSR3]
 gi|327368530|gb|AEA59886.1| hypothetical protein bgla_1g12080 [Burkholderia gladioli BSR3]
          Length = 412

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++++  L +  + V +   I+S    E+A + +  P  V+K     G +   R   LPA 
Sbjct: 108 HRSRQRLAEAGLAVPRFARIASPAELEAAAERVGFP-AVLKPVDGCGSQLVTRVDSLPAL 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQT 96
            +   R        + D+   LG  L+ +Q 
Sbjct: 167 REAVERAAR---EGVIDMGRELGQALLLEQY 194


>gi|302871822|ref|YP_003840458.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574681|gb|ADL42472.1| carbamoyl-phosphate synthase, large subunit [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 1075

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K   PV    V++ V    +  K +  P+ +  +    G             + G
Sbjct: 133 KELMIKIGEPVVPSEVVNCVEDGVAFAKKIGFPVIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++    +   R+ L  +            V+ + VE      +E+   ++  R S
Sbjct: 180 GI--ANNEDEFVEIARKGLSYS-----------PVHQILVEKSIKGWKEIEYEVM--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                       +D   V       I   ++ P   ++ ++          + D+L+++G
Sbjct: 225 NGCLITVCNMENIDP--VGIHTGDSI---VVAPSQTLSDKEYQMLRSSALKIIDVLKIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
              +       N   A  + +  +   + L     G    
Sbjct: 280 GCNVQFALNPENFEYAVIEVNPRVSRSSALASKATGYPIA 319



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 13/105 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K N+    G    ++  A     +L  P+ V  S +  G   K  F +        
Sbjct: 676 KILNKLNIKRPPGFTCFALQEALEIANSLGYPVLVRPSYVLGGQGMKIAFDD-------- 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
               + +  ++S  + +    ++       G  +    + DG DI
Sbjct: 728 ----NDIVEMLSYAKNLNDHPILID-KYIVGKEIEVDAISDGEDI 767


>gi|221638520|ref|YP_002524782.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides KD131]
 gi|221159301|gb|ACM00281.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides KD131]
          Length = 294

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           AK +     +PV + V+  +        + +  P YVVK 
Sbjct: 94  AKEVFAAAGLPVTQSVLA-TPEEVR--ARHILPPPYVVKP 130


>gi|70606056|ref|YP_254926.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           acidocaldarius DSM 639]
 gi|121696205|sp|Q4JC46|PURT_SULAC RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|68566704|gb|AAY79633.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           acidocaldarius DSM 639]
          Length = 398

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 26/115 (22%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            K  VP       +S    +   K +  P  ++K Q+ + G G                V
Sbjct: 122 EKVKVPTTAYGFATSPEEVKKMCKDVGYPC-IIKPQMSSSGHGH--------------EV 166

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                 V    +E L     T   G +      V VE+   I RE  L++L  R 
Sbjct: 167 IYDESQVEEKFKEAL-----THARGKS----KTVIVEEYVKIDRE--LTVLTYRY 210


>gi|119718202|ref|YP_925167.1| hypothetical protein Noca_3983 [Nocardioides sp. JS614]
 gi|119538863|gb|ABL83480.1| protein of unknown function DUF201 [Nocardioides sp. JS614]
          Length = 290

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 4/95 (4%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+   +PV   V   +V    +A       + VVK ++ AGGRG     +          
Sbjct: 102 LQSTGLPVVPTVAADTVFDVRAAADRYG--VAVVKPRVGAGGRGLEVVSDGRVWLPSPD- 158

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
                  ++  + E +     T      G  V+ V
Sbjct: 159 -GHPGPWIVQPLVESIHHDGETSVFMIAGHPVSQV 192


>gi|305662709|ref|YP_003858997.1| Phosphoribosylaminoimidazole carboxylase [Ignisphaera aggregans DSM
           17230]
 gi|304377278|gb|ADM27117.1| Phosphoribosylaminoimidazole carboxylase [Ignisphaera aggregans DSM
           17230]
          Length = 404

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 35/114 (30%), Gaps = 27/114 (23%)

Query: 12  LRKY-----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           LRK+      +P  +     +   A  A + +  P  + K ++ + G G  +  +     
Sbjct: 120 LRKFAAEVLGLPTTRYRFAENPDEAVEACEEVGIPCLI-KPEMSSSGHGHAKVLDPSPKV 178

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
                    ++              ++   G    R   V VE+   +  E  +
Sbjct: 179 ---------IREAYEYA--------VSHARG----RSRRVIVEEFVQLETEFTV 211


>gi|290559309|gb|EFD92645.1| CoA-binding domain protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 683

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 49/145 (33%), Gaps = 30/145 (20%)

Query: 271 CMVNGAGLAMATMDIIKLYGGAPANF---------------------LDVGGGADQDKVA 309
            + N  G  + T D I   G   A F                     +D+ G A  ++  
Sbjct: 302 IVTNAGGAGVVTTDHITKIGLKLAKFNDKTLNELAKALPKEANIHNPVDMVGDATPERYR 361

Query: 310 AAFKIITSDSSVKGILINIFGGIMRCD--VLVKGILSAVKEVKINIPLV-MRLEGANVDI 366
              +I+   +     +I +F            K I   V +   N+P + + L GA V+ 
Sbjct: 362 DTLEILVQQNKP---IIILFSPQEMSQPLETAKQIFE-VHQRHPNVPFLSVFLGGARVEK 417

Query: 367 GNRLIAESGLNVITAIDLDDAAQKI 391
             R I E  + +    +  +A Q I
Sbjct: 418 ARRFILERNMPIYQYPN--EAVQMI 440


>gi|289192333|ref|YP_003458274.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus sp.
           FS406-22]
 gi|288938783|gb|ADC69538.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus sp.
           FS406-22]
          Length = 501

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK +++K  VP+  G    I  +  A    + +  P+ V
Sbjct: 119 AKKIMKKAGVPLIPGSEGAIEDIDEAVEIAEAIGFPVVV 157


>gi|294944041|ref|XP_002784057.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897091|gb|EER15853.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 1533

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 4/48 (8%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L  K        VA+    ++V  A  A   L  P+ V  +    G
Sbjct: 592 RELFSKAVETVGYKVAESESCTTVEEAVDAAAKLGYPVLVRAAYALGG 639


>gi|221070100|ref|ZP_03546205.1| CoA-binding domain protein [Comamonas testosteroni KF-1]
 gi|220715123|gb|EED70491.1| CoA-binding domain protein [Comamonas testosteroni KF-1]
          Length = 701

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 78/226 (34%), Gaps = 25/226 (11%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +A   L    V V   V+  +   A S  + L GP+ V+K                  
Sbjct: 488 EREAMTFLASAGVAVVPQVLADTEALAVSTARELGGPV-VLKI---------ASPDIAHK 537

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GGV +          + E     + + +     +R++ V V        EL++ +  
Sbjct: 538 TEVGGVLLNLQGDEA---VAEGFRRIMASARVALPQARLDGVVVSPMRKAGVELFVGV-- 592

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
            R       IA   GG+ IE +       +  L + P  +     ++  +  +   +G A
Sbjct: 593 RRDEQWGHVIALGLGGVWIEALKDVS---LRVLPVSPREVKRMVGELRGVSLLQGFRGAA 649

Query: 184 RIDGGDLFPNLYK-----AFCDKDMSLLEINPLIIMKNGRLRVLDS 224
            +D   L  ++ +           +  LE+NPL      R+  LD+
Sbjct: 650 PVDLDALAESVARIGDAALALGDTLDTLEVNPL-RADGARIEALDA 694


>gi|190346302|gb|EDK38354.2| hypothetical protein PGUG_02452 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 720

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 61/206 (29%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +     VP V    ++     A+     L  P+ V KS    GG G  +      
Sbjct: 392 HSAREIASAAGVPLVPGSGLVKDSKEAKEIAAKLEYPIMV-KSTAGGGGIGLQK------ 444

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E+ ++ V   ++    S              + V++E   +  R + + +  
Sbjct: 445 -----VDSEADIERVFQTVQHQGKSYFGD----------SGVFLERFVEDARHVEIQMFG 489

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 490 DGYGKAIAL------GERDCSLQRRNQKIIEETPAPNLPEATRARMRKAAESLGATMNY- 542

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 543 -KCAGTVEFIYDQ-RRDEFYFLEVNA 566


>gi|77919721|ref|YP_357536.1| acetyl-CoA carboxylase/biotin carboxylase [Pelobacter carbinolicus
           DSM 2380]
 gi|77545804|gb|ABA89366.1| acetyl-CoA carboxylase/biotin carboxylase [Pelobacter carbinolicus
           DSM 2380]
          Length = 445

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 14  KYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K  VP+  G    + ++  A    + +  P+ ++K+    GGRG
Sbjct: 125 KAGVPILPGTTEGVGTIDQARQIAEEIGYPV-IIKATAGGGGRG 167


>gi|331669335|ref|ZP_08370183.1| putative CoA binding domain protein [Escherichia coli TA271]
 gi|331064529|gb|EGI36440.1| putative CoA binding domain protein [Escherichia coli TA271]
          Length = 652

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 30/193 (15%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADILRELY 119
              ++ +G +    +   V      I     +   Q    G  V  +    G    +EL 
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAG---AQELR 586

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           + ++          +   +GG++        P+    + + PL         +L   L +
Sbjct: 587 V-VVEHDPVFGPLIML-GEGGVEW------RPEDQAVVALPPLN-------MNLARYLVI 631

Query: 180 QGQARIDGGDLFP 192
           QG           
Sbjct: 632 QGIKSKRFVRAVR 644


>gi|262404999|ref|ZP_06081551.1| phosphoribosylamine--glycine ligase [Vibrio sp. RC586]
 gi|262348838|gb|EEY97979.1| phosphoribosylamine--glycine ligase [Vibrio sp. RC586]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|299820622|ref|ZP_07052512.1| phosphoribosylamine-glycine ligase [Listeria grayi DSM 20601]
 gi|299818117|gb|EFI85351.1| phosphoribosylamine-glycine ligase [Listeria grayi DSM 20601]
          Length = 421

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +P A+    +    A++ +     P+ V+K+   A G+             
Sbjct: 107 AKQFMKKYAIPTAEFQTFTDYETAKAYLDKQGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +++     ++++L    +  +    G   + V +E+      E  L   V+  
Sbjct: 153 -GVVVAETMEIATIALKDML----LEDKFSKAGE--HKVVIEEFLS-GEEFSLMAFVNGE 204

Query: 128 SGMVAFIA 135
           +     IA
Sbjct: 205 AVYPMEIA 212


>gi|224043097|ref|XP_002196217.1| PREDICTED: propionyl Coenzyme A carboxylase, alpha polypeptide
           [Taeniopygia guttata]
          Length = 677

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 64/215 (29%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 128 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 172

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 173 GGGKGMRIAWDDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 225

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   +      
Sbjct: 226 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALAKAVNYSSAG 282

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 283 TVEFLVDSSKNFY--FLEMNTRLQVEHPVTECITG 315


>gi|124022256|ref|YP_001016563.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           MIT 9303]
 gi|123962542|gb|ABM77298.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           MIT 9303]
          Length = 438

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ +  VP AK   +S+   A S +  +  P  VVK+   A G+             
Sbjct: 122 SKTLMAEAGVPTAKHWTVSTAADALSVLNQVQQP-LVVKADGLAAGK------------- 167

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S+++    I+E+      + + G  G     V  E+  +
Sbjct: 168 -GVCVADSIEATAEAIQEVF-----SGRFGAAG--CQLVL-EERLE 204


>gi|15839260|ref|NP_299948.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Xylella
           fastidiosa 9a5c]
 gi|9107907|gb|AAF85468.1|AE004073_3 phosphoribosylaminoimidazole carboxylase, ATPase subunit [Xylella
           fastidiosa 9a5c]
          Length = 393

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 27/122 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L R   +PV   V + +  A + AI  +  P  ++K++   G  GKG+F+        
Sbjct: 103 KTLFRDLGIPVPDFVAVDNRAALDVAIVKVGTPC-ILKTR-RFGYDGKGQFR-------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 +L         +LG     +Q G TG     + +E      RE  +S+L  R  
Sbjct: 153 ----IKTLIDA-DAAWAMLG-----EQAGITG-----LILEAFVPFQRE--MSILAVRGC 195

Query: 129 GM 130
             
Sbjct: 196 NG 197


>gi|253576161|ref|ZP_04853493.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844504|gb|EES72520.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 1070

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ALL K  +   KG  ++SV  A    + L  P+ V  S +  G
Sbjct: 681 ALLSKLGIAQPKGSTVTSVEEAVGTAQALGYPVLVRPSYVLGG 723



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 29/89 (32%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+R+   PV +  +I+SV  A      +  P+ V  +    G  G     E       
Sbjct: 133 RELMRELEQPVPESAIITSVEEALEFANEIGYPVIVRPAYTLGGTGGGICATEEELRETV 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTG 97
              +  S        + I G   I  +  
Sbjct: 193 ASGIRYSPIGQCLIEKSIAGMKEIEYEVM 221


>gi|297194013|ref|ZP_06911411.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722837|gb|EDY66745.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 397

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 39/178 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP  +  +++      +  +   G   ++K+ +  G  GK            GV 
Sbjct: 128 LTEIGVPCPRHRIVADPADVTAFAEETGGFPVILKT-VRGGYDGK------------GVW 174

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           +  + +   +  +               G  V     E+  D  REL  +++      + 
Sbjct: 175 LVRAEQDAEAPFK--------------AGVPV---LAEEKVDFRRELAANIVRSPHGQAV 217

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQARID 186
               + S Q     + V    P       +D  L G   E    +   L + G   ++
Sbjct: 218 AYPVVESQQVDGVCDTVIAPAPD------LDAELAGQAQELALRIAKELGVVGHLAVE 269


>gi|295108563|emb|CBL22516.1| phosphoribosylamine--glycine ligase [Ruminococcus obeum A2-162]
          Length = 427

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A          A   + T      V+K+   A G+             
Sbjct: 109 SKDLMKKYGIPTAGYENFDDPQKALEYLHTQAKFPIVLKADGLALGK------------- 155

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV + ++L+   + ++EI+
Sbjct: 156 -GVLICNTLEEAEAGVKEIM 174


>gi|325678689|ref|ZP_08158299.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Ruminococcus
           albus 8]
 gi|324109739|gb|EGC03945.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Ruminococcus
           albus 8]
          Length = 456

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           QAK  +++  VPV  G    IS++HAA++  + L  P+ V  S
Sbjct: 118 QAKETMKENGVPVIMGSDGAISNIHAAKTLARDLGYPVLVKAS 160


>gi|254294262|ref|YP_003060285.1| acetyl-CoA carboxylase, biotin carboxylase [Hirschia baltica ATCC
           49814]
 gi|254042793|gb|ACT59588.1| acetyl-CoA carboxylase, biotin carboxylase [Hirschia baltica ATCC
           49814]
          Length = 448

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G V   V  A+   K +  P+ ++K+    GGR          
Sbjct: 120 AKDAMIRTGVPCVPGSDGGVAD-VAEAQKVAKQIGYPV-IIKASAGGGGR---------- 167

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G++V  +   + +        T  T+     G   + VY+E      R + + ++ 
Sbjct: 168 ----GMKVALTPDELETA-----FRTARTESKAAFGD--DAVYIEKYLQKPRHIEIQVIA 216

Query: 125 DRT 127
           D  
Sbjct: 217 DTH 219


>gi|146417509|ref|XP_001484723.1| hypothetical protein PGUG_02452 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 720

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 61/206 (29%), Gaps = 32/206 (15%)

Query: 6   YQAKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ +     VP V    ++     A+     L  P+ V KS    GG G  +      
Sbjct: 392 HSAREIASAAGVPLVPGSGLVKDSKEAKEIAAKLEYPIMV-KSTAGGGGIGLQK------ 444

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E+ ++ V   ++    S              + V++E   +  R + + +  
Sbjct: 445 -----VDSEADIERVFQTVQHQGKSYFGD----------SGVFLERFVEDARHVEIQMFG 489

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +A       G     + +   + I +     L   T   +    + L       
Sbjct: 490 DGYGKAIAL------GERDCSLQRRNQKIIEETPAPNLPEATRARMRKAAESLGATMNY- 542

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
                    +Y      +   LE+N 
Sbjct: 543 -KCAGTVEFIYDQ-RRDEFYFLEVNA 566


>gi|147678085|ref|YP_001212300.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274182|dbj|BAF59931.1| acyl-CoA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 700

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 81/228 (35%), Gaps = 25/228 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A  ++  Y VPVA  V+ SS   A      +  P+ V+K             K +    
Sbjct: 491 EAAEVVAAYGVPVAPTVLSSSPEEAAGQADKIGYPV-VLKI---------ASPKIMHKTD 540

Query: 67  KGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GGV+   ++   V +   EI+ +             V  V V+       EL + +  D
Sbjct: 541 VGGVKTGLATHDQVKAGFIEIMDNV----HRYLPRVSVYGVEVQKMMPKGIELIIGVTRD 596

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKI----FKLLIDPLIGVTSEDVASLCDMLELQG 181
              G    IA   GG+ +  +     +       + +I+ +    +  +  L      + 
Sbjct: 597 VQFG--PLIAFGLGGIYVNLLKDVSFRLTDGLSPREVINMIAETKAYTL--LRGYRGEKP 652

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  ++   + K   D  +++ ++INP+     G    LD KI+ 
Sbjct: 653 ADIKAIIEIIGRVAKLVNDFPEITEMDINPVFAYNKG-ACALDVKITI 699


>gi|323692312|ref|ZP_08106551.1| phosphoribosylamine-glycine ligase [Clostridium symbiosum
           WAL-14673]
 gi|323503637|gb|EGB19460.1| phosphoribosylamine-glycine ligase [Clostridium symbiosum
           WAL-14673]
          Length = 424

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A          A   +KT   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYENFDDPEKALLYLKTAEMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +   + ++EI    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTHEEAEAGVKEI----MMDKKFGSAG---NQMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKIMTSAQD 212


>gi|312130295|ref|YP_003997635.1| succinyl-CoA synthetase, alpha subunit [Leadbetterella byssophila
           DSM 17132]
 gi|311906841|gb|ADQ17282.1| succinyl-CoA synthetase, alpha subunit [Leadbetterella byssophila
           DSM 17132]
          Length = 291

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 11/135 (8%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYG-GAPANFLDVGGGADQDKVAAAFKIITSDSS 320
           +I   G IG +     L    +D +   G G        G          A +++ +D  
Sbjct: 141 FIFKKGTIGVVSKSGTLTYEAVDQLTKVGLGQSTAIGIGGDPIIGTTTKQAVEMLMNDPE 200

Query: 321 VKGILIN--IFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNV 378
            +GI++   I GG+       +     +KE     P+V  + G     G R+   +G  +
Sbjct: 201 TEGIVMIGEIGGGME-----AEA-ARYIKETGNKKPVVGFIAGQTAPKGRRM-GHAGAII 253

Query: 379 ITAIDLDDAAQKIVH 393
             A D   AA+  + 
Sbjct: 254 GGADDTA-AAKMAIM 267


>gi|295113097|emb|CBL31734.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
           [Enterococcus sp. 7L76]
          Length = 637

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 245 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 291


>gi|227828344|ref|YP_002830124.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           islandicus M.14.25]
 gi|229585575|ref|YP_002844077.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           islandicus M.16.27]
 gi|238620537|ref|YP_002915363.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           islandicus M.16.4]
 gi|227460140|gb|ACP38826.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           M.14.25]
 gi|228020625|gb|ACP56032.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           M.16.27]
 gi|238381607|gb|ACR42695.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           M.16.4]
          Length = 397

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 53/163 (32%), Gaps = 26/163 (15%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P  K V   +   A+ A K +  P  + K ++ + G G              V   + +
Sbjct: 126 LPTTKYVFAENEEEAKHACKDIGFPCLI-KPEMSSSGHGHVL-----------VNKINDV 173

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
           +    +         ++   G +      V VE+   I  EL + L     S   + I  
Sbjct: 174 EEAYRES--------VSHARGKS----RRVIVEEFVKIDTELTV-LTYRYYSNSGSIITK 220

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLE 178
           T   ++ +  +  Y +      +   +  T+      + + L 
Sbjct: 221 TIEPIEHKRPSYYYVESWHPSTVSREVKETARGIAQKVVEELG 263


>gi|170098412|ref|XP_001880425.1| carbamoyl-phosphate synthase [Laccaria bicolor S238N-H82]
 gi|164644863|gb|EDR09112.1| carbamoyl-phosphate synthase [Laccaria bicolor S238N-H82]
          Length = 1164

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 62/218 (28%), Gaps = 38/218 (17%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++PVA+   +SSV+AA  A + +  P+ +         R       L +       
Sbjct: 210 LKEIDIPVAQSTAVSSVNAALEAAEVIGYPVIL---------RSAFTLGGLGSG------ 254

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++   +     + L  +               V +E      +EL   ++  R +   
Sbjct: 255 FANNPDELRDLAAKGLSLS-------------PQVLIERSMKGWKELEYEVV--RDAADN 299

Query: 132 AFIASTQGGMDIEEVAKDYPQKI-----FKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             I       D   +       I       L  D    + S     +   L + G+  I 
Sbjct: 300 TIICCNMENFDP--LGTHTGDSIVVAPSQTLPDDEYHMLRSA-ALKVIRHLGVVGECNIQ 356

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
                 +      + +      + L     G      +
Sbjct: 357 YALNPTSREYCVIEVNARYESRSALASKATGYPLAYTA 394


>gi|146342907|ref|YP_001207955.1| phosphoribosylamine--glycine ligase [Bradyrhizobium sp. ORS278]
 gi|146195713|emb|CAL79740.1| Phosphoribosylamine--glycine ligase (GARS) (Glycinamide
           ribonucleotide synthetase) (Phosphoribosylglycinamide
           synthetase) [Bradyrhizobium sp. ORS278]
          Length = 427

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 26/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y +P        +   A + ++    P+ VVK+   A G+              
Sbjct: 107 KDLCAEYGIPTGAYSRFDNAPEALAYVREHGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R +          G  G+ V    +E+  +  RE+    L D  +
Sbjct: 152 GVVVARTLVEAEEAVRMMFD-----GGFGVAGAEV---VIEEFLE-GREVSFFALCDGET 202

Query: 129 GMVAFIASTQG 139
            +   +AS Q 
Sbjct: 203 AIP--LASAQD 211


>gi|94970314|ref|YP_592362.1| acetyl-CoA carboxylase, biotin carboxylase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94552364|gb|ABF42288.1| acetyl-CoA carboxylase, biotin carboxylase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 451

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 3/43 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQ 48
           A+A ++++ VP+  G   V+++   A    K +  P+ +VK++
Sbjct: 119 ARAAMKEHGVPILPGSDGVVATEAEAMEWAKKIGFPV-IVKAK 160


>gi|186685989|ref|YP_001869185.1| acetyl-CoA carboxylase biotin carboxylase subunit [Nostoc
           punctiforme PCC 73102]
 gi|186468441|gb|ACC84242.1| acetyl-CoA carboxylase, biotin carboxylase [Nostoc punctiforme PCC
           73102]
          Length = 447

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  ++K  VP   G   ++ S        K +  P+ ++K+    GGRG
Sbjct: 120 AKETMQKAGVPTVPGSEGLVESEEEGLKFAKEIGYPV-MIKATAGGGGRG 168


>gi|322515407|ref|ZP_08068399.1| phosphoribosylamine-glycine ligase [Actinobacillus ureae ATCC
           25976]
 gi|322118562|gb|EFX90794.1| phosphoribosylamine-glycine ligase [Actinobacillus ureae ATCC
           25976]
          Length = 428

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + +K    P+ V+K+   A G+              
Sbjct: 109 KDFLTRHQIPTAEYQNFTEIEPALAYLKQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
               
Sbjct: 206 VEPM 209


>gi|255282669|ref|ZP_05347224.1| phosphoribosylamine--glycine ligase [Bryantella formatexigens DSM
           14469]
 gi|255266690|gb|EET59895.1| phosphoribosylamine--glycine ligase [Bryantella formatexigens DSM
           14469]
          Length = 424

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A         AA + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYHIPTAAYENFDDPQAALAYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++L+   + ++ I    ++ KQ G +G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTLEEAQAGVKTI----MLDKQFGASG---NRMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKTMTSAQD 212


>gi|148668300|gb|EDL00630.1| propionyl-Coenzyme A carboxylase, alpha polypeptide, isoform CRA_a
           [Mus musculus]
          Length = 699

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G   V+     A    + +  P+ +  S                 
Sbjct: 175 ESKLLAKRAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 219

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 220 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 272

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +DP       E   +L   ++     
Sbjct: 273 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDPETRQAMGEQAVALAKAVKYSSAG 329

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 330 TVEFLVDSQKNFY--FLEMNTRLQVEHPVTECITG 362


>gi|146309882|ref|YP_001174956.1| phosphoribosylamine--glycine ligase [Enterobacter sp. 638]
 gi|145316758|gb|ABP58905.1| phosphoribosylamine--glycine ligase [Enterobacter sp. 638]
          Length = 430

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P  +    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTGEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + ++++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|320449813|ref|YP_004201909.1| phosphoribosylamine--glycine ligase [Thermus scotoductus SA-01]
 gi|320149982|gb|ADW21360.1| phosphoribosylamine--glycine ligase [Thermus scotoductus SA-01]
          Length = 415

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 3/109 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +Y +P A+  V      A   ++++  P+ V+K    A G+G     +L    +
Sbjct: 105 AKRLMERYGIPTARYRVFQDALLALEYVESVGVPI-VIKDSGLAAGKGVTVAFDLHTAKQ 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
             + + S  +     + E L     T      G  V  +      D  R
Sbjct: 164 AILNLLSGPEGGEVVVEEYLEGDEATVLALTDGETVLPLL--PSQDHKR 210


>gi|196248043|ref|ZP_03146745.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           G11MC16]
 gi|196212827|gb|EDY07584.1| carbamoyl-phosphate synthase, large subunit [Geobacillus sp.
           G11MC16]
          Length = 1042

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 65/187 (34%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  ++++V  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMHELGEPVPESEIVTNVKEAVAFAEQIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +++  I+ + +           G   S +    +E      +E+   ++ D+++
Sbjct: 180 GI--AENMEQFIALVEK-----------GLAESPIRQCLIERSVAGFKEIEYEVMRDQSN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGVHTGDSIVVAPSQTLTDEEYQMLRSSAVKIISALGIIG 279

Query: 182 QARIDGG 188
              I   
Sbjct: 280 GCNIQFA 286


>gi|311693457|gb|ADP96330.1| D-alanine-D-alanine ligase [marine bacterium HP15]
          Length = 323

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 69/225 (30%), Gaps = 50/225 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +     +P  K   +S    AE  I  L  PL V               K     S  
Sbjct: 118 KYVFEGCGLPTPKFRTMSGADQAEQIIDELRAPLSV---------------KPSREGSSI 162

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+R   +   +                        N V VE+  +   E  +SLL DR  
Sbjct: 163 GIRKVHTAAELAHAYEAAAALD-------------NLVLVEEWIE-GPEFTVSLLQDRAL 208

Query: 129 GMVAFIASTQG---GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
             +   AST+      + + +A D   +I         G+  ED         LQ  A  
Sbjct: 209 PAIGLSASTEHVFYDYEAKYLADDTRYRIPC-------GLAPEDEVR------LQHLALE 255

Query: 186 DGGDLFPNLY---KAFCDKD--MSLLEINPLIIMKNGRLRVLDSK 225
               +    +       D D    LLE+N +  M +  L  + +K
Sbjct: 256 AFRVVGCRTWGRVDIMQDSDGKFWLLEVNTVPGMTDHSLVPMAAK 300


>gi|238059412|ref|ZP_04604121.1| carbamoyl-phosphate synthase subunit L, ATP-binding
          [Micromonospora sp. ATCC 39149]
 gi|237881223|gb|EEP70051.1| carbamoyl-phosphate synthase subunit L, ATP-binding
          [Micromonospora sp. ATCC 39149]
          Length = 399

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 8  AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYV 44
          A+ALLR+  +P+  G V +  +   A      +  P+ V
Sbjct: 11 ARALLRRAGLPLPPGSVETLPTAQRAAEVAAEIGYPVIV 49


>gi|297200159|ref|ZP_06917556.1| phosphoribosylglycinamide formyltransferase 2 [Streptomyces sviceus
           ATCC 29083]
 gi|197713391|gb|EDY57425.1| phosphoribosylglycinamide formyltransferase 2 [Streptomyces sviceus
           ATCC 29083]
          Length = 409

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 39/178 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  +  ++S      +      G   V+K+ +  G  GK            GV V  S
Sbjct: 144 GVPCPRHRIVSDPEDVAAFAAEGDGFPVVLKT-VRGGYDGK------------GVWVVDS 190

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSGMVAF 133
            +      R               G  V     E+  D +REL  +++      +     
Sbjct: 191 AEEAADPFR--------------AGVPV---LAEEKVDYVRELAANVVRSPHGQAVAYPV 233

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQARIDGGDL 190
           + S Q     + V    P       +D  + + +E++A ++   L++ G   ++    
Sbjct: 234 VESQQVNGVCDTVIAPAPD------LDRTLALKAEELALNIAKELDVVGHLAVELFQT 285


>gi|168001228|ref|XP_001753317.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695603|gb|EDQ81946.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 510

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   +I +   A      +  P+ ++K+    GGRG     E    
Sbjct: 157 ARETMKSAGVPTVPGSEGLIQTTEEAVRLAHEIGFPV-MIKATAGGGGRGMRLANEPG-- 213

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 214 -----EFVKLLQQARSEAGAAFGND 233


>gi|150400008|ref|YP_001323775.1| CoA-binding domain-containing protein [Methanococcus vannielii SB]
 gi|150012711|gb|ABR55163.1| CoA-binding domain protein [Methanococcus vannielii SB]
          Length = 706

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 13/103 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L+     + K  V  SV  AE+  K+L   +  V                      
Sbjct: 494 SKEFLKLNGFNIPKKFVAKSVEEAETYAKSLGKVVMKV-------------VSSNIPHKS 540

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
               V  +  ++      I+ +             ++ V VE+
Sbjct: 541 DAGCVIINPANIKEAFETIIKNGEKYLSEKNVDGIIDGVLVEE 583


>gi|78778447|ref|YP_396559.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9312]
 gi|78711946|gb|ABB49123.1| acetyl-CoA carboxylase, biotin carboxylase [Prochlorococcus marinus
           str. MIT 9312]
          Length = 448

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +    VP   G   ++S+V  A      +  P+ ++K+    GGRG  R  E   +
Sbjct: 119 AKETMEAVGVPTVPGSKGLLSNVDEAYKLADDIGYPV-IIKATAGGGGRGM-RLVENADN 176

Query: 66  SKGGVRVESSLKSVI 80
            +   +         
Sbjct: 177 LEKMFKAAQGEAEAA 191


>gi|42783042|ref|NP_980289.1| pyruvate carboxylase [Bacillus cereus ATCC 10987]
 gi|42738969|gb|AAS42897.1| pyruvate carboxylase [Bacillus cereus ATCC 10987]
          Length = 1148

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|320322746|gb|EFW78839.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330469|gb|EFW86448.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 431

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREEGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|319790183|ref|YP_004151816.1| phosphoribosylglycinamide formyltransferase 2 [Thermovibrio
           ammonificans HB-1]
 gi|317114685|gb|ADU97175.1| phosphoribosylglycinamide formyltransferase 2 [Thermovibrio
           ammonificans HB-1]
          Length = 394

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 28/139 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  +      +    + A++ L  P+ VVK  + + G+G+   +E              
Sbjct: 125 GLKTSAYRFAETFEEFKRAVEELGYPV-VVKPVMSSSGKGQSVVREPSQ----------- 172

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           L+      +E              G   N + +E+  +   E+ L L V   +    F  
Sbjct: 173 LEWAFRYAKE-----------NARGKG-NALIIEEFINFDFEITL-LTVRTRNQGTLFCE 219

Query: 134 -IASTQGGMDIEEVAKDYP 151
            I   Q   D  E  +  P
Sbjct: 220 PIGHRQVDGDYHESWQPQP 238


>gi|303232446|ref|ZP_07319138.1| phosphoribosylamine--glycine ligase [Atopobium vaginae PB189-T1-4]
 gi|302481530|gb|EFL44598.1| phosphoribosylamine--glycine ligase [Atopobium vaginae PB189-T1-4]
          Length = 446

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 27/108 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL-----PGPLYVVKSQIHAGGRGKGRFKEL 62
           AK L+ KY++P A   V +S   A +A++            V+K+   A G+        
Sbjct: 127 AKNLMHKYHIPTAAYAVYTSYAEALAAVQAQHVTPAGFVPVVIKADGPAAGK-------- 178

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
                 GV +  S +     ++EI        Q        + V +E+
Sbjct: 179 ------GVIIAHSFEEAQGALQEIFTLHEFGSQ--------SQVVIEE 212


>gi|227553521|ref|ZP_03983570.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           HH22]
 gi|227177348|gb|EEI58320.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           HH22]
          Length = 922

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 530 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 576


>gi|254391638|ref|ZP_05006836.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces clavuligerus ATCC 27064]
 gi|294812992|ref|ZP_06771635.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces clavuligerus ATCC 27064]
 gi|197705323|gb|EDY51135.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces clavuligerus ATCC 27064]
 gi|294325591|gb|EFG07234.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces clavuligerus ATCC 27064]
          Length = 412

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 70/272 (25%), Gaps = 79/272 (29%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    VP  +  +++      +  +   G   V+K+ +  G  GK            GV 
Sbjct: 143 LAGLGVPCPRHRIVTDPADVSAFAEEAGGYPVVLKT-VRGGYDGK------------GVW 189

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V  +        R               G  V     E+  +  REL  +++        
Sbjct: 190 VVRTEAEAADPFR--------------AGVPV---LAEEKVEFTRELAANVVRSPHGQ-- 230

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-------DVASLCDMLELQGQAR 184
                    +    V       +   +I P  G+  E          ++   L + G   
Sbjct: 231 --------AVAYPVVESQQVDGVCDTVIAPAPGLDEELAGQAQRLALTIAAELGVVGHLA 282

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLII--------MKNGRL---RVLDSKISFDDNAL 233
           ++           F   D  +L +N L +         ++G +        +   D    
Sbjct: 283 VE----------LFETPDGRIL-VNELAMRPHNSGHWTQDGAVTSQFANHLRAVLD---- 327

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIAL 265
                   L D        + +      Y  +
Sbjct: 328 ------LPLGDPRPRAPWTVMSNVLGGDYPDM 353


>gi|302392493|ref|YP_003828313.1| biotin carboxylase ;acetyl-CoA carboxylase carboxyltransferase
           subunit alpha [Acetohalobium arabaticum DSM 5501]
 gi|302204570|gb|ADL13248.1| biotin carboxylase ;acetyl-CoA carboxylase carboxyltransferase
           subunit alpha [Acetohalobium arabaticum DSM 5501]
          Length = 450

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 8   AKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           A+  + +  VPV    +G + S +  A      +  P+ +VK+    GGRG     +   
Sbjct: 119 ARETMIEAGVPVVPGTEGGL-SGLEEAVETADEIGYPV-IVKAAFGGGGRGMRT-AQNED 175

Query: 65  DSKGGVRVESSLKSVI 80
           D K  ++  SS     
Sbjct: 176 DLKQAIQTASSEAEAA 191


>gi|257085039|ref|ZP_05579400.1| carbamoyl-phosphate synthase [Enterococcus faecalis Fly1]
 gi|256993069|gb|EEU80371.1| carbamoyl-phosphate synthase [Enterococcus faecalis Fly1]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|256961781|ref|ZP_05565952.1| carbamoyl-phosphate synthase [Enterococcus faecalis Merz96]
 gi|256952277|gb|EEU68909.1| carbamoyl-phosphate synthase [Enterococcus faecalis Merz96]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|255972648|ref|ZP_05423234.1| carbamoyl-phosphate synthase [Enterococcus faecalis T1]
 gi|255963666|gb|EET96142.1| carbamoyl-phosphate synthase [Enterococcus faecalis T1]
 gi|323480875|gb|ADX80314.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Enterococcus faecalis 62]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|300860878|ref|ZP_07106965.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TUSoD Ef11]
 gi|300849917|gb|EFK77667.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TUSoD Ef11]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|261856156|ref|YP_003263439.1| carbamoyl-phosphate synthase, large subunit [Halothiobacillus
           neapolitanus c2]
 gi|261836625|gb|ACX96392.1| carbamoyl-phosphate synthase, large subunit [Halothiobacillus
           neapolitanus c2]
          Length = 1077

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 61/212 (28%), Gaps = 38/212 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  +    +     VV+ S+  A  A+  L  P+ +             R       S G
Sbjct: 133 REAMADIGLSTPSSVVVHSLEEAFDALSDLGFPVII-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + +     +R  L  +             + + +E      +E  + ++ DR  
Sbjct: 180 GI--AYNREEYEEIVRRGLDLS-----------PTSELLIEQSVLGWKEYEMEVVRDRND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLRKIGVET 279

Query: 187 GGDLFPNLYKAFCDKDMSLL-EINPLIIMKNG 217
           GG      +    +    ++ E+NP +   + 
Sbjct: 280 GGSNVQ--FAVNPENGAMIVIEMNPRVSRSSA 309


>gi|295839949|ref|ZP_06826882.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp.
           SPB74]
 gi|197696784|gb|EDY43717.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp.
           SPB74]
          Length = 1104

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|160914208|ref|ZP_02076429.1| hypothetical protein EUBDOL_00216 [Eubacterium dolichum DSM 3991]
 gi|158433835|gb|EDP12124.1| hypothetical protein EUBDOL_00216 [Eubacterium dolichum DSM 3991]
          Length = 1065

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 51/184 (27%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+ +   PV + V++ SV  A     T   P+ V                        
Sbjct: 133 RELMYELGEPVPESVIVHSVEEAVEFANTNGYPVVV------------------------ 168

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             R   +L          L    +  + G   S V+   +E      +E+   ++  R +
Sbjct: 169 --RPAFTLGGTGGGFANNLEELEVICENGLKLSPVHQCLIEQSIAGYKEIEYEVM--RDN 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLELQGQAR 184
              A +      +D   V       I         D   G+       +   L++ G   
Sbjct: 225 ADNAIVVCNMENVDP--VGIHTGDSIVVAPTQTLTDRECGMMRAAALKIIRALKICGGCN 282

Query: 185 IDGG 188
           +   
Sbjct: 283 VQLA 286


>gi|77462663|ref|YP_352167.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides 2.4.1]
 gi|126461556|ref|YP_001042670.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides ATCC 17029]
 gi|123592597|sp|Q3J4L8|DDL_RHOS4 RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|190359209|sp|A3PHT2|DDL_RHOS1 RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|77387081|gb|ABA78266.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides 2.4.1]
 gi|126103220|gb|ABN75898.1| D-alanine--D-alanine ligase [Rhodobacter sphaeroides ATCC 17029]
          Length = 307

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           AK +     +PV + V+  +        + +  P YVVK 
Sbjct: 107 AKEVFAAAGLPVTQSVLA-TPEEVR--ARHILPPPYVVKP 143


>gi|332006575|gb|AED93958.1| biotin carboxylase [Arabidopsis thaliana]
          Length = 555

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S   A      +  P+ ++K+    GGRG    KE    
Sbjct: 191 ARETMKNAGVPTVPGSDGLLQSTEEAVRVANEIGFPV-MIKATAGGGGRGMRLAKEPG-- 247

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 248 -----EFVKLLQQAKSEAAAAFGND 267


>gi|325127246|gb|EGC50184.1| phosphoribosylamine--glycine ligase [Neisseria meningitidis N1568]
          Length = 423

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V  +L    + I ++L
Sbjct: 152 -GVIVAMTLDEAHAAIDDML 170


>gi|260365387|ref|ZP_05777929.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus K5030]
 gi|308112834|gb|EFO50374.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus K5030]
          Length = 876

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 16/135 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDEIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELYLSLLVDRTSG 129
               + + V +  + IL +   +  +      V+ + V+ G      EL +S+ VD+  G
Sbjct: 536 LNLRNSREVSNAAQSILDTVKFSYPSAN----VHGLLVQHGELGSAEELRISIAVDKVFG 591

Query: 130 MVAFIASTQGGMDIE 144
            V  +   QGG +  
Sbjct: 592 PVILLG--QGGSEWN 604


>gi|302517956|ref|ZP_07270298.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp.
           SPB78]
 gi|302426851|gb|EFK98666.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp.
           SPB78]
          Length = 1104

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|229545672|ref|ZP_04434397.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           TX1322]
 gi|307291846|ref|ZP_07571717.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0411]
 gi|229309240|gb|EEN75227.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           TX1322]
 gi|306497112|gb|EFM66658.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0411]
 gi|315029551|gb|EFT41483.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX4000]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|118471918|ref|YP_885074.1| acetyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118173205|gb|ABK74101.1| acetyl-CoA synthetase, putative [Mycobacterium smegmatis str. MC2
           155]
          Length = 675

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y V V       S   A +A   +  P+ V           K       +D  G 
Sbjct: 475 DLLADYGVAVPDSRPAHSRAEAVAAAAAIGYPVAV-----------KTAGAAHKSDVGGV 523

Query: 70  VRVESSLKSVISDIREI---LGSTLITKQTGPTGSRVNCVYVEDGA 112
           V   S    V++   ++   LG  +      P G  V+  +V D A
Sbjct: 524 VLGVSGPDEVVAVYDDMAARLGPAVSVDAMVPAGVEVSVGFVRDAA 569


>gi|21535791|emb|CAC85727.1| putative carbamoyl phosphate synthase large subunit [Nicotiana
           tabacum]
          Length = 1203

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 51/167 (30%), Gaps = 32/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++   +      + +++         +     +++     GG G G           
Sbjct: 229 KQAMKNIGIKTPPSGIGNTLEECIEIAGEIGEFPLIIRPAFTLGGTGGG----------- 277

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  +  L ++L +            V VE      +E  L ++ D  +
Sbjct: 278 ---IAYNREEFEAICKSGLAASLTS-----------QVLVEKSLLGWKEYELEVMRD-LA 322

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  I S      IE +          + + P   +T ++   L D
Sbjct: 323 DNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 363


>gi|116621513|ref|YP_823669.1| carbamoyl-phosphate synthase large subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224675|gb|ABJ83384.1| carbamoyl-phosphate synthase large subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 1070

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +RK  +   +  +IS+V A     + +  P  +++     GG G G           
Sbjct: 133 KDAMRKIGLATPQSQLISTVAAGLEFAEKIGYP-NILRPSFTMGGTGGG----------- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + + ++  +             G   S V+ V +E+ A   +E  L ++ D   
Sbjct: 181 ---IAYNKEELVEILER-----------GIALSPVHEVLMEESALGWKEYELEVMRDLAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             +           IE            + + P   +T  +   + D
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDREYQMMRD 266


>gi|257416236|ref|ZP_05593230.1| carbamoyl-phosphate synthase [Enterococcus faecalis AR01/DG]
 gi|257158064|gb|EEU88024.1| carbamoyl-phosphate synthase [Enterococcus faecalis ARO1/DG]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|257082407|ref|ZP_05576768.1| carbamoyl-phosphate synthase [Enterococcus faecalis E1Sol]
 gi|256990437|gb|EEU77739.1| carbamoyl-phosphate synthase [Enterococcus faecalis E1Sol]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|256619209|ref|ZP_05476055.1| carbamoyl-phosphate synthase [Enterococcus faecalis ATCC 4200]
 gi|256598736|gb|EEU17912.1| carbamoyl-phosphate synthase [Enterococcus faecalis ATCC 4200]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|255975700|ref|ZP_05426286.1| carbamoyl-phosphate synthase [Enterococcus faecalis T2]
 gi|255968572|gb|EET99194.1| carbamoyl-phosphate synthase [Enterococcus faecalis T2]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|302544866|ref|ZP_07297208.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302462484|gb|EFL25577.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces himastatinicus ATCC 53653]
          Length = 379

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  L +  VP  +  +++         +   G   V+K+ +  G  GKG +     +   
Sbjct: 107 RERLYEAGVPCPRHRIVADPEDVARFAEEGDGFPVVLKT-VRGGYDGKGVWVVRSVEDAA 165

Query: 69  GVRVESSL---KSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
                      + ++   RE+  + + +    P G  V    VE 
Sbjct: 166 DPFRAGVPVLAEELVDFARELAANVVRS----PHGQAVAYPVVES 206


>gi|256853271|ref|ZP_05558641.1| carbamoyl-phosphate synthase large subunit [Enterococcus faecalis
           T8]
 gi|256711730|gb|EEU26768.1| carbamoyl-phosphate synthase large subunit [Enterococcus faecalis
           T8]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V         R              
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIV---------RPAFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
              +  + + +       L  + +T+     
Sbjct: 181 ---MCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|169831178|ref|YP_001717160.1| acetyl-CoA carboxylase, biotin carboxylase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638022|gb|ACA59528.1| acetyl-CoA carboxylase, biotin carboxylase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 446

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 7   QAKALLRKYNVP-VA-KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +A  L+RK  VP V   G  ++ +  A +  + +  P+ + K+    GGRG  R     +
Sbjct: 117 EALELVRKMGVPIVPGSGGAVNGLDHALAVAEEIGYPVLI-KASAGGGGRGM-RVAHNKS 174

Query: 65  DSKGGVRVESSLKS 78
           D    ++   S   
Sbjct: 175 DLSRALQAAQSEAQ 188


>gi|123966734|ref|YP_001011815.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           MIT 9515]
 gi|123201100|gb|ABM72708.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           MIT 9515]
          Length = 445

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  +R+  +P A    I S+  A+  I   P P  VVK+   A G+G
Sbjct: 122 AKEFMREAKIPTANFWKIKSLEEAKEIIFKSPNP-LVVKADGLASGKG 168


>gi|315168886|gb|EFU12903.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX1341]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|312901879|ref|ZP_07761144.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0470]
 gi|311291072|gb|EFQ69628.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0470]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|257090030|ref|ZP_05584391.1| carbamoyl-phosphate synthase [Enterococcus faecalis CH188]
 gi|256998842|gb|EEU85362.1| carbamoyl-phosphate synthase [Enterococcus faecalis CH188]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|256964979|ref|ZP_05569150.1| carbamoyl-phosphate synthase [Enterococcus faecalis HIP11704]
 gi|256955475|gb|EEU72107.1| carbamoyl-phosphate synthase [Enterococcus faecalis HIP11704]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|256752676|ref|ZP_05493527.1| D-alanine--D-alanine ligase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748438|gb|EEU61491.1| D-alanine--D-alanine ligase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 259

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 65/225 (28%), Gaps = 36/225 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++  + +P  K V+  +     S    L  PL+V        GRG     E       
Sbjct: 39  KDIVASHGLPTPKYVIAENPQEIPSV-DHLKFPLFV----KPISGRGSAGIDEEN----- 88

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +      +   + +I      T++ G          +E+  +  +E+ + ++  +  
Sbjct: 89  ---IIYDKDKLPQVVSKI------TEKIG------QAALIEEFIE-GKEVTVGIIGYKHP 132

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQ-KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            ++  +      +            +I K  I+       ++V        L     ++ 
Sbjct: 133 QVLPLLEVGYNNVKTNTYEHKMFDNEIIKCPIEV-----PKEVEEKIKETALNIYKVLNA 187

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLI----IMKNGRLRVLDSKISF 228
            D          D     LE+N           G   V    + +
Sbjct: 188 KDFARIDMILSKDNVPYFLELNTFAGLTMSSSKGEKHVHHGYMGY 232


>gi|238494064|ref|XP_002378268.1| bifunctional purine biosynthetic protein Ade1, putative
           [Aspergillus flavus NRRL3357]
 gi|220694918|gb|EED51261.1| bifunctional purine biosynthetic protein Ade1, putative
           [Aspergillus flavus NRRL3357]
          Length = 817

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++N+P A          A   I ++   + V+K+   AGG+             
Sbjct: 115 SKDFMKRHNIPTAAYENFREYEPARQYIDSISHNV-VIKADGLAGGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV +  + +     +RE+    ++ +Q G  G   N V +E+
Sbjct: 161 -GVVIPQTKEEAHQALREM----MLDRQFGDAG---NEVVIEE 195


>gi|149002646|ref|ZP_01827578.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP14-BS69]
 gi|147759257|gb|EDK66250.1| carbamoyl phosphate synthase large subunit [Streptococcus
           pneumoniae SP14-BS69]
          Length = 714

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++    G   ++   A  A + +  P+ V  S +  G
Sbjct: 324 DLFE-QA---LKELDISQPPGQTATNEEEAALAARKIGFPVLVRPSYVLGG 370


>gi|29376268|ref|NP_815422.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           V583]
 gi|81838905|sp|Q834E2|CARB_ENTFA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|29343731|gb|AAO81492.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           V583]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|169776985|ref|XP_001822958.1| phosphoribosylformylglycinamidine cyclo-ligase [Aspergillus oryzae
           RIB40]
 gi|83771695|dbj|BAE61825.1| unnamed protein product [Aspergillus oryzae]
          Length = 817

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++N+P A          A   I ++   + V+K+   AGG+             
Sbjct: 115 SKDFMKRHNIPTAAYENFREYEPARQYIDSISHNV-VIKADGLAGGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV +  + +     +RE+    ++ +Q G  G   N V +E+
Sbjct: 161 -GVVIPQTKEEAHQALREM----MLDRQFGDAG---NEVVIEE 195


>gi|332143332|ref|YP_004429070.1| Phosphoribosylamine-glycine ligase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327553354|gb|AEB00073.1| Phosphoribosylamine-glycine ligase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 430

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 23/123 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A+    + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHSIPTAEYQNFTEIDPAIAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     IR++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEEAIRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMV 131
            + 
Sbjct: 206 VLP 208


>gi|333028367|ref|ZP_08456431.1| putative carbamoyl phosphate synthase large subunit [Streptomyces
           sp. Tu6071]
 gi|332748219|gb|EGJ78660.1| putative carbamoyl phosphate synthase large subunit [Streptomyces
           sp. Tu6071]
          Length = 1061

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 640 RVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 684


>gi|323487459|ref|ZP_08092754.1| hypothetical protein HMPREF9474_04505 [Clostridium symbiosum
           WAL-14163]
 gi|323399228|gb|EGA91631.1| hypothetical protein HMPREF9474_04505 [Clostridium symbiosum
           WAL-14163]
          Length = 424

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A          A   +KT   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAGYENFDDPEKALLYLKTAEMPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +   + ++EI    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICNTHEEAEAGVKEI----MMDKKFGSAG---NQMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKIMTSAQD 212


>gi|315162367|gb|EFU06384.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0645]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|307277918|ref|ZP_07559002.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0860]
 gi|306505315|gb|EFM74501.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0860]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|262192522|ref|ZP_06050672.1| phosphoribosylamine--glycine ligase [Vibrio cholerae CT 5369-93]
 gi|262031567|gb|EEY50155.1| phosphoribosylamine--glycine ligase [Vibrio cholerae CT 5369-93]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|257419441|ref|ZP_05596435.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           T11]
 gi|257422467|ref|ZP_05599457.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           X98]
 gi|257161269|gb|EEU91229.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           T11]
 gi|257164291|gb|EEU94251.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           X98]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|261402992|ref|YP_003247216.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus
           vulcanius M7]
 gi|261369985|gb|ACX72734.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus
           vulcanius M7]
          Length = 501

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK +++K  VP+  G    I  +  A    + +  P+ V
Sbjct: 119 AKKIMKKAGVPLIPGSDGAIEDIDEAIEIAEQIGFPVVV 157


>gi|297198321|ref|ZP_06915718.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sviceus
           ATCC 29083]
 gi|197714372|gb|EDY58406.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sviceus
           ATCC 29083]
          Length = 1102

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|254286253|ref|ZP_04961212.1| phosphoribosylamine--glycine ligase [Vibrio cholerae AM-19226]
 gi|150423668|gb|EDN15610.1| phosphoribosylamine--glycine ligase [Vibrio cholerae AM-19226]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|138895969|ref|YP_001126422.1| acetyl-CoA carboxylase biotin carboxylase subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248861|ref|ZP_03147561.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp.
           G11MC16]
 gi|134267482|gb|ABO67677.1| AccC, acetyl-CoA carboxylase subunit, biotin carboxylase subunit
           [Geobacillus thermodenitrificans NG80-2]
 gi|196211737|gb|EDY06496.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacillus sp.
           G11MC16]
          Length = 451

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  +R+  VP+  G   VI S+  A +    +  P+ ++K+
Sbjct: 119 ARETMREAGVPIVPGSRGVIESIDEARAIAAEIGYPV-IIKA 159


>gi|113954487|ref|YP_731653.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. CC9311]
 gi|113881838|gb|ABI46796.1| acetyl-CoA carboxylase, biotin carboxylase [Synechococcus sp.
           CC9311]
          Length = 447

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 96/277 (34%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+ ++   VP   G   ++ +  AA      +  P+ ++K+    GGR           
Sbjct: 120 AKSTMQAVGVPTVPGSEGLLPNPEAAAELAAAMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   ++   +   G        G  G     +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVPSPDQLVKLYKAAQGE--ADAAFGNPG-----LYMEKFIDRPRHVEVQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +DP L     E   +    +  +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEEAPSPALDPELRRRMGEAAVAAARSINYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D     Y  F + +  +   +P+  M  G  L     +I+  +    R  DIQ +
Sbjct: 275 VEFLLDRSGGFY--FMEMNTRIQVEHPVTEMVTGIDLIAEQLRIAGGEPISVRQEDIQ-M 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
           R  + E     E  QHN       G I       G G
Sbjct: 332 RGHAIECRINAEDAQHNFR--PAPGRITGWLPPGGPG 366


>gi|90424691|ref|YP_533061.1| carbamoyl-phosphate synthase L chain, ATP-binding [Rhodopseudomonas
           palustris BisB18]
 gi|90106705|gb|ABD88742.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Rhodopseudomonas
           palustris BisB18]
          Length = 664

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAA-ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA++RK  VP V           A      ++  P+ ++K+    GGRG  R  E  A 
Sbjct: 129 AKAIMRKAGVPCVPGYQGADQSDEAMAREAASIGFPV-MIKAVAGGGGRGM-RLVEDAAA 186

Query: 66  SKGGVRVESSLKS 78
               +R   S   
Sbjct: 187 FAEALRGARSEAQ 199


>gi|329571889|gb|EGG53567.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX1467]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGSMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|327535280|gb|AEA94114.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           OG1RF]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|314933378|ref|ZP_07840743.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus caprae
           C87]
 gi|313653528|gb|EFS17285.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus caprae
           C87]
          Length = 1057

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLR+  VP  +G   +S   A    + +  P+ V  S +  G
Sbjct: 669 EFEA--LLRQIEVPQPQGKTSTSPKEALENAREIGYPVVVRPSYVLGG 714


>gi|293383487|ref|ZP_06629400.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           R712]
 gi|293388858|ref|ZP_06633344.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           S613]
 gi|312907684|ref|ZP_07766675.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           DAPTO 512]
 gi|312910302|ref|ZP_07769149.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           DAPTO 516]
 gi|291079278|gb|EFE16642.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           R712]
 gi|291081783|gb|EFE18746.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           S613]
 gi|310626712|gb|EFQ09995.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           DAPTO 512]
 gi|311289575|gb|EFQ68131.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           DAPTO 516]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|262306515|gb|ACY45850.1| pyrimidine biosynthesis [Polyxenus fasciculatus]
          Length = 200

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L+ +    VA     S++  A +  +++  P+ V  +  +A G     F   P + K  
Sbjct: 106 ELIAEVGEKVAPSAAASTIEEAVTVAESIGYPVLVRTA--YALGGLGSGFANNPTELKAL 163

Query: 70  V 70
           V
Sbjct: 164 V 164


>gi|257079157|ref|ZP_05573518.1| carbamoyl-phosphate synthase [Enterococcus faecalis JH1]
 gi|294779374|ref|ZP_06744775.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           PC1.1]
 gi|256987187|gb|EEU74489.1| carbamoyl-phosphate synthase [Enterococcus faecalis JH1]
 gi|294453503|gb|EFG21904.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           PC1.1]
          Length = 1060

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|229549864|ref|ZP_04438589.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           ATCC 29200]
 gi|312951646|ref|ZP_07770541.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0102]
 gi|229305133|gb|EEN71129.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           ATCC 29200]
 gi|310630363|gb|EFQ13646.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0102]
 gi|315152333|gb|EFT96349.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0031]
 gi|315158224|gb|EFU02241.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0312]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|223043725|ref|ZP_03613768.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus capitis
           SK14]
 gi|222442822|gb|EEE48924.1| carbamoyl-phosphate synthase, large subunit [Staphylococcus capitis
           SK14]
          Length = 1057

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           E++A  LLR+  VP  +G   +S   A    + +  P+ V  S +  G
Sbjct: 669 EFEA--LLRQIEVPQPQGKTSTSPKEALENAREIGYPVVVRPSYVLGG 714


>gi|222525419|ref|YP_002569890.1| phosphoribosylglycinamide synthetase [Chloroflexus sp. Y-400-fl]
 gi|222449298|gb|ACM53564.1| phosphoribosylglycinamide synthetase [Chloroflexus sp. Y-400-fl]
          Length = 417

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 20/105 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L  +  VP     + ++     + ++++  P  V               K L  +   
Sbjct: 112 RQLFARAGVPSPAFRLCTTADDLPTLVQSVTFPCVV---------------KPLRLNGSR 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV    +    ++ IR +             G+ V+   +ED   
Sbjct: 157 GVIRADNPAQCLAAIRRLAALL-----DRIEGAGVHEFLIEDFVP 196


>gi|153801522|ref|ZP_01956108.1| phosphoribosylamine--glycine ligase [Vibrio cholerae MZO-3]
 gi|124122927|gb|EAY41670.1| phosphoribosylamine--glycine ligase [Vibrio cholerae MZO-3]
          Length = 411

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 91  KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 135

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 136 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 187

Query: 129 GMVA 132
            +  
Sbjct: 188 VLPM 191


>gi|118084650|ref|XP_416970.2| PREDICTED: similar to Propionyl-Coenzyme A carboxylase, alpha
           polypeptide [Gallus gallus]
          Length = 713

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 164 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 208

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 209 GGGKGMRIAWDDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 261

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   ++     
Sbjct: 262 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALAKAVKYSSAG 318

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 319 TVEFLVDSSKNFY--FLEMNTRLQVEHPVTECITG 351


>gi|56964098|ref|YP_175829.1| carbamoyl phosphate synthase large subunit [Bacillus clausii
           KSM-K16]
 gi|56910341|dbj|BAD64868.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
           [Bacillus clausii KSM-K16]
          Length = 1062

 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 45/199 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P   G   +SV  A +  + +  P+ V  S +  G                 + +   
Sbjct: 678 GIPQPLGKTATSVDGAVAIARKIGYPVLVRPSYVLGG---------------RAMEIVYH 722

Query: 76  LKSV---ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
            + +   +    ++     +      TG  +    + DG D+    Y+  +++       
Sbjct: 723 EEELLRYMQTAVKVNPKHPVLVDRYLTGKELEVDAISDGNDV----YIPGIMEHIER--- 775

Query: 133 FIASTQGGMDIEEVAKDY-PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
             A    G  I        P  + + LI        E   S+   L + G   I      
Sbjct: 776 --AGVHSGDSIAVYPPQTVPDHLKQRLI--------ERTTSIAKGLNIVGLLNIQF---- 821

Query: 192 PNLYKAFCDKDMSLLEINP 210
                 +   D+ +LE+NP
Sbjct: 822 -----VWHKDDVYVLEVNP 835


>gi|323127062|gb|ADX24359.1| carbamoyl phosphate synthase large subunit [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 1058

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 22/38 (57%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K L+++   P+ +  +++SV  A +  +T+  P+ V
Sbjct: 131 QFKQLMKELEQPIPESEIVTSVEEAVAFAQTIGYPVIV 168



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L+   +P   G   ++   A +A   +  P+ V  S +  G
Sbjct: 674 LKALGIPQPPGQTATNEAEALAAASHIGFPVLVRPSYVLGG 714


>gi|307275823|ref|ZP_07556962.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX2134]
 gi|306507515|gb|EFM76646.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX2134]
 gi|315032024|gb|EFT43956.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0017]
 gi|315144955|gb|EFT88971.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX2141]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|251782209|ref|YP_002996511.1| carbamoyl phosphate synthase large subunit [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390838|dbj|BAH81297.1| carbamoyl-phosphate synthase large chain [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 1058

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 22/38 (57%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K L+++   P+ +  +++SV  A +  +T+  P+ V
Sbjct: 131 QFKQLMKELEQPIPESEIVTSVEEAVAFAQTIGYPVIV 168



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L+   +P   G   ++   A +A   +  P+ V  S +  G
Sbjct: 674 LKALGIPQPPGQTATNEAEALAAASHIGFPVLVRPSYVLGG 714


>gi|117617677|ref|YP_855382.1| phosphoribosylamine--glycine ligase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559084|gb|ABK36032.1| phosphoribosylamine--glycine ligase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A+    + V  A + ++    P+ V+K+   A G+             
Sbjct: 108 AKDFLARHAIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +R++L         G  G+RV    +E+  D   E    ++VD  
Sbjct: 154 -GVIVAMTLSEAEEAVRDML----SGNAFGDAGARV---VIEEFLD-GEEASFIVMVDGE 204

Query: 128 SGMVA 132
             +  
Sbjct: 205 HVLPM 209


>gi|13430734|gb|AAK25989.1|AF360279_1 putative acetyl-CoA carboxylase [Arabidopsis thaliana]
          Length = 537

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S   A      +  P+ ++K+    GGRG    KE    
Sbjct: 191 ARETMKNAGVPTVPGSDGLLQSTEEAVRVANEIGFPV-MIKATAGGGGRGMRLAKEPG-- 247

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 248 -----EFVKLLQQAKSEAAAAFGND 267


>gi|153826744|ref|ZP_01979411.1| phosphoribosylamine--glycine ligase [Vibrio cholerae MZO-2]
 gi|297581739|ref|ZP_06943661.1| phosphoribosylamine-glycine ligase [Vibrio cholerae RC385]
 gi|149739459|gb|EDM53697.1| phosphoribosylamine--glycine ligase [Vibrio cholerae MZO-2]
 gi|297534146|gb|EFH72985.1| phosphoribosylamine-glycine ligase [Vibrio cholerae RC385]
          Length = 429

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|83814987|ref|YP_444613.1| acetyl-CoA carboxylase, biotin carboxylase [Salinibacter ruber DSM
           13855]
 gi|83756381|gb|ABC44494.1| acetyl-CoA carboxylase, biotin carboxylase [Salinibacter ruber DSM
           13855]
          Length = 506

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 33/172 (19%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+++  VP+A G    ++S    E   + +  P+ +               K     
Sbjct: 128 ARQLMKEAGVPMAPGTTDAVASTEEGEEIAEDIGYPVLI---------------KAAAGG 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+    +     +    G    +   G        V++E   +  R +   +L D
Sbjct: 173 GGKGMRIVHEPEHFAGAMDRAQGEAASSFGDG-------RVFIEKYIEEPRHIEFQILGD 225

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
                     +T    + E   +   QK+ +    P   +T E    +    
Sbjct: 226 HH-------GNTVHLFERECSIQRRHQKVIEEA--PSSVLTPEVRREMGKAA 268


>gi|83590873|ref|YP_430882.1| phosphoribosylamine--glycine ligase [Moorella thermoacetica ATCC
           39073]
 gi|83573787|gb|ABC20339.1| phosphoribosylamine--glycine ligase [Moorella thermoacetica ATCC
           39073]
          Length = 421

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++  +P A     +    A + ++  PGP+ VVK+   A G+             
Sbjct: 106 AKELMQEAGIPTAAHATFTEPGPALAYLEEHPGPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V     +  + +R++ G        GP G RV    +E+  +   E+ +  L D  
Sbjct: 152 -GVVVAPDAATARAAVRDMFGGKF-----GPAGRRV---ILEERLE-GEEVSILALCDGK 201

Query: 128 SGMVAF 133
           + +   
Sbjct: 202 TAIPLL 207


>gi|57640128|ref|YP_182606.1| GMP synthase subunit B [Thermococcus kodakarensis KOD1]
 gi|62286909|sp|Q5JFM1|GUAAB_PYRKO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|57158452|dbj|BAD84382.1| GMP synthase, PP-loop-ATPase component [Thermococcus kodakarensis
           KOD1]
          Length = 307

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A + +   L+ V        +G+  F       + G+ +         D  
Sbjct: 30  VDSSTAAVLAHRAIGDRLHAVFVNTGFMRKGEPEFVVKTFRDEFGLNLHY------VDAS 83

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           E     L          ++   V++E   ++ +E+    L+  T     +I S  G +  
Sbjct: 84  ERFFRELKGVTDPEEKRKIIGRVFIEVFEEVAKEINADFLIQGTIA-PDWIES-HGKIKS 141

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+++   LI+PL  +  ++V  L   L L 
Sbjct: 142 HHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELGLP 178


>gi|322369184|ref|ZP_08043749.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Haladaptatus paucihalophilus DX253]
 gi|320550916|gb|EFW92565.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Haladaptatus paucihalophilus DX253]
          Length = 388

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 22/184 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF--KELPADS 66
           K  L+   +PV     + S      A +    P+ +   +    GRG      ++   ++
Sbjct: 111 KRALQDRGIPVPDFRPVDSREDLLEAGEEFGYPMMLKARRGGYDGRGNVPVEDEDDVDNA 170

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQ---TGPTGSRVNCVYV--------------- 108
              V  E  ++  +   RE+    +       T P G  V+   +               
Sbjct: 171 LSQVSGELMVEEFVPFERELSVIAVKGDDEVATFPVGENVHEEEILRQTVVPARTSDEVR 230

Query: 109 EDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168
           E   D+ RE+ LS L  R +  +       G + + E+A   P       I+  +    E
Sbjct: 231 ERAEDVAREV-LSALSGRGTYGIELFEGEDGDISVNEIAP-RPHNSGHYTIEGALTSQFE 288

Query: 169 DVAS 172
             A 
Sbjct: 289 QHAR 292


>gi|315156134|gb|EFU00151.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0043]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|312903464|ref|ZP_07762644.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0635]
 gi|310633340|gb|EFQ16623.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0635]
 gi|315577840|gb|EFU90031.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0630]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|307269527|ref|ZP_07550866.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX4248]
 gi|306514147|gb|EFM82723.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX4248]
 gi|315147411|gb|EFT91427.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX4244]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|307273074|ref|ZP_07554320.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0855]
 gi|306510059|gb|EFM79083.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0855]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|307289254|ref|ZP_07569210.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0109]
 gi|306499963|gb|EFM69324.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0109]
 gi|315163868|gb|EFU07885.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX1302]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|296116671|ref|ZP_06835281.1| carbamoyl phosphate synthase large subunit [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295976883|gb|EFG83651.1| carbamoyl phosphate synthase large subunit [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 1085

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +QA   L K  +   +  +  S   AE     +  P+ V  S +  G
Sbjct: 684 FQAM--LHKVGLRQPENGIARSPTEAEDVADRIGYPVVVRPSYVLGG 728



 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 50/161 (31%), Gaps = 33/161 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +   + V+  ++  A  A+K +  P  +             R       S GG+    +
Sbjct: 140 GIESPRSVIAHTLAEAREALKQVGLPSVI-------------RPSFTMGGSGGGI--AYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            +     +   L ++  T+           V +E+     +E  + ++ D     +    
Sbjct: 185 REEFDRIVTSGLDASPTTE-----------VLIEESVLGWKEYEMEVVRDTADNCIII-- 231

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
                  IE +          + + P + +T ++   + D 
Sbjct: 232 -----CSIENIDPMGVHTGDSITVAPALTLTDKEYQRMRDA 267


>gi|227518905|ref|ZP_03948954.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           TX0104]
 gi|227073594|gb|EEI11557.1| carbamoyl phosphate synthase large subunit [Enterococcus faecalis
           TX0104]
 gi|315576074|gb|EFU88265.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0309B]
 gi|315580649|gb|EFU92840.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0309A]
          Length = 1066

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|182626043|ref|ZP_02953805.1| putative glutamate--cysteine ligase [Clostridium perfringens D str.
           JGS1721]
 gi|177908655|gb|EDT71171.1| putative glutamate--cysteine ligase [Clostridium perfringens D str.
           JGS1721]
          Length = 778

 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F    L  D 
Sbjct: 521 KDILRENNIRVPKGKDYDNIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFPGEYLREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|291541504|emb|CBL14614.1| biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase
           subunit alpha [Ruminococcus bromii L2-63]
          Length = 452

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 8   AKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+  +R   VPV  G  ++ +V  A+   + +  PL + K++   GG+G
Sbjct: 119 ARKTMRAAGVPVTPGCDIVENVEQAKEEAEKIGFPLLI-KARSGGGGKG 166


>gi|227328912|ref|ZP_03832936.1| putative allophanate hydrolase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 1201

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 34/212 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL +++NVP+ +G  ++ ++ AA  A + +  P+                 K      
Sbjct: 119 ARALAKQHNVPLLEGTELLENIDAALRAAEAIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S   +      +    L        G     V++E   +  R L + +  D 
Sbjct: 164 GIGMRVCYSTTELSDAFETV--KRLGQNNFSDAG-----VFIEKYIERARHLEVQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + I +     L  GV           + L      
Sbjct: 217 QGDVLAL------GVRDCSVQRRNQKVIEETPAPNLPDGVADALC---AAAISLAQAVNY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                   +Y +  D+    LE+N  + +++G
Sbjct: 268 RSAGTVEFVYDSATDR-FYFLEVNTRLQVEHG 298


>gi|223992539|ref|XP_002285953.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977268|gb|EED95594.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1149

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 15/80 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           K  L+++++P AK    +S   A + +++L P    VVK+   A G+             
Sbjct: 282 KDFLQQHDIPTAKYRNFTSADEAIAYVQSLDPTDRQVVKASGLAAGK------------- 328

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV + ++    I  +REI+
Sbjct: 329 -GVLLPTTPAETIDAVREIM 347


>gi|167042699|gb|ABZ07419.1| putative carbamoyl-phosphate synthase L chain, ATP binding domain
           protein [uncultured marine crenarchaeote
           HF4000_ANIW133O4]
 gi|167044892|gb|ABZ09559.1| putative carbamoyl-phosphate synthase L chain, ATP binding domain
           protein [uncultured marine crenarchaeote
           HF4000_APKG8D22]
          Length = 282

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           LL+K  +P  +  +  S  AA  +++    P  ++K  + + GR   +  +
Sbjct: 95  LLQKAGIPTPEATIAFSKEAAMQSLEKSGYPK-IIKPTVGSWGRMVSKLND 144


>gi|161527781|ref|YP_001581607.1| carbamoyl-phosphate synthase L chain ATP-binding [Nitrosopumilus
           maritimus SCM1]
 gi|160339082|gb|ABX12169.1| Carbamoyl-phosphate synthase L chain ATP-binding [Nitrosopumilus
           maritimus SCM1]
          Length = 495

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 26/117 (22%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           KA + K  VP   G   ++ +   AE     +  P+  +KS    GGR            
Sbjct: 120 KAAMLKAQVPTVPGSPGLVDTAEEAEKIANEIGYPVL-LKSVYGGGGR------------ 166

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLS 121
             G+R+ ++ + +          T+ ++     G   + + VE   +  R  E  + 
Sbjct: 167 --GIRLVTTDQELREGFE-----TVTSESIAAVGK--SAIIVEKFLEKTRHIEYQMC 214


>gi|153004266|ref|YP_001378591.1| phosphoribosylamine--glycine ligase [Anaeromyxobacter sp. Fw109-5]
 gi|152027839|gb|ABS25607.1| phosphoribosylamine--glycine ligase [Anaeromyxobacter sp. Fw109-5]
          Length = 420

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    +P A     S +  A +  +   G + VVK+   A G+             
Sbjct: 106 AKEIMEAAGIPTAGHGTFSDLDPALAFARARGGRV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V + L+     +R +L    + K  G  G+RV    VED  +
Sbjct: 152 -GVVVCADLREAEEALRAML----VDKVHGGAGARV---VVEDRLE 189


>gi|315150764|gb|EFT94780.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0012]
          Length = 1066

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKQIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|308272716|emb|CBX29320.1| D-alanine--D-alanine ligase [uncultured Desulfobacterium sp.]
          Length = 312

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 4/92 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAI--KTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK L  +  +PV   ++I      E     K L  P ++VK  +  G        +    
Sbjct: 94  AKQLYEQSGIPVPPYIMIKKGDPVEYKTCEKRLGSP-FIVKP-VSGGSSIGVSIVKSDKS 151

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG 97
               V    S    +     I G  +     G
Sbjct: 152 FNEAVESAFSCDDTVLIETFIEGIEITGGVIG 183


>gi|256762645|ref|ZP_05503225.1| carbamoyl-phosphate synthase [Enterococcus faecalis T3]
 gi|256959125|ref|ZP_05563296.1| carbamoyl-phosphate synthase [Enterococcus faecalis DS5]
 gi|256683896|gb|EEU23591.1| carbamoyl-phosphate synthase [Enterococcus faecalis T3]
 gi|256949621|gb|EEU66253.1| carbamoyl-phosphate synthase [Enterococcus faecalis DS5]
          Length = 1060

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELEIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|269928849|ref|YP_003321170.1| lysine biosynthesis enzyme LysX [Sphaerobacter thermophilus DSM
           20745]
 gi|269788206|gb|ACZ40348.1| lysine biosynthesis enzyme LysX [Sphaerobacter thermophilus DSM
           20745]
          Length = 302

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
            +P  + +V  +  AA  AI++L  P+ V+K  + + GR
Sbjct: 109 GLPQPRLLVAYTPEAALEAIESLGYPV-VLKPPVGSWGR 146


>gi|167562119|ref|ZP_02355035.1| phosphoribosylamine--glycine ligase [Burkholderia oklahomensis
           EO147]
 gi|167569368|ref|ZP_02362242.1| phosphoribosylamine--glycine ligase [Burkholderia oklahomensis
           C6786]
          Length = 425

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P   G    +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPT-AGYETFTDAAAAHAYLDAKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+     +       L   + G  G+RV    +E+  D   E    ++VD  
Sbjct: 152 -GVVVATTLEEAHEAVD----MMLSGNKLGDAGARV---VIEEFLD-GEEASFIVMVDGK 202

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 203 NA--LALASSQD 212


>gi|160933777|ref|ZP_02081165.1| hypothetical protein CLOLEP_02638 [Clostridium leptum DSM 753]
 gi|156867654|gb|EDO61026.1| hypothetical protein CLOLEP_02638 [Clostridium leptum DSM 753]
          Length = 1355

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 33/82 (40%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K++V  A+G  + +   A      +  P+ +  S +  G      F +        
Sbjct: 670 ELLEKHHVKRAEGFTVMTTEEALEVANRIGYPVLMRPSYVLGGQNMIIAFNDADIKEYMA 729

Query: 70  VRVESSLKSVISDIREILGSTL 91
           + +   +++ I   + ++G+ L
Sbjct: 730 IILAQEIENPILIDKYLMGTEL 751


>gi|119190005|ref|XP_001245609.1| hypothetical protein CIMG_05050 [Coccidioides immitis RS]
          Length = 687

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 104/334 (31%), Gaps = 38/334 (11%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--- 61
           QAK L     VPV K +    S ++  ++    +  P+ ++K+    GGRG    +    
Sbjct: 140 QAKELAEACGVPVLKAITQPTSDLNVIKAFAAEVGYPV-MIKAVDGGGGRGIRLVRSEDT 198

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
           L A     +    S K  +     + G   +  Q    G+       E    I R     
Sbjct: 199 LQASVDRAMGESPSKKVFVEKAA-VEGYHHVEVQVIGDGTGQVRHLWERDCSIQRRF--- 254

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
                     A +   +    + E A     +I  L +     + +E  +       L+ 
Sbjct: 255 --QKIVECAPALMKDRKLICLVIEAALRIANRIKYLSLGTFEFLVNEQASEFYF---LEI 309

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ- 240
             R+                      I  + ++++  L    + +        R  +   
Sbjct: 310 NPRLQVEHTITEC-------------ITSVDLVRSQFLLAQGASLQDIGLGENRDPETPP 356

Query: 241 -----ELRDVSEEDSREIEAKQHN-LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
                +LR +  ED     A     ++   + G  G  V+     ++ + +   +    A
Sbjct: 357 GPHSIQLR-LCAEDPNANFALSIGKITGFHVPGGNGVRVDTNISDLSPVVVGSDFDNMVA 415

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
               +   A  D V +  + +  D+ + GI  NI
Sbjct: 416 K--IIVTAASWDAVISKARRVLEDTKISGIKTNI 447


>gi|146297865|ref|YP_001192456.1| carbamoyl phosphate synthase large subunit [Flavobacterium
           johnsoniae UW101]
 gi|146152283|gb|ABQ03137.1| carbamoyl-phosphate synthase, large subunit [Flavobacterium
           johnsoniae UW101]
          Length = 951

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 62/213 (29%), Gaps = 35/213 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K LL K  VP A     +S    +   +    P  V++     GG G     +     
Sbjct: 132 QFKQLLEKIKVPTAPAKTATSYLEGKEIAQEFGFP-LVIRPSFTLGGTGAAVVYK----- 185

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                          D  E+L         G   S ++ V ++      +E  L LL D+
Sbjct: 186 -------------KEDFDELL-------TRGLEASPIHEVLIDKALMGWKEYELELLRDK 225

Query: 127 TSGMVAFIASTQ--GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
            +  V  I S +    M I             L       +    +  +  +    G   
Sbjct: 226 -NDNVVIICSIENMDPMGIHTGDSITVAPAMTLSDTTFQKLRDYAILMMRSIGNFAGGCN 284

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           +               +D+  +EINP +   + 
Sbjct: 285 VQFAVSPD------EKEDIVAIEINPRVSRSSA 311


>gi|25027269|ref|NP_737323.1| putative urea carboxylase [Corynebacterium efficiens YS-314]
 gi|259506595|ref|ZP_05749497.1| urea carboxylase [Corynebacterium efficiens YS-314]
 gi|23492550|dbj|BAC17523.1| putative urea carboxylase [Corynebacterium efficiens YS-314]
 gi|259165793|gb|EEW50347.1| urea carboxylase [Corynebacterium efficiens YS-314]
          Length = 1202

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 52/170 (30%), Gaps = 26/170 (15%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L     VP+  G  ++SS   A +  + +  P+ V  S                   
Sbjct: 119 ARQLAEAAGVPLLPGTGLLSSADEAVAKAQEIGLPVMVKAS---------------NGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G++  + L  V      +    L  +  G  G     V++E      R + + +  D 
Sbjct: 164 GIGMQSCTGLDQVREAFTRV--QRLAEQNFGSGG-----VFLERLVRPARHIEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
              +  F         ++   +   ++     + P++  T    +     
Sbjct: 217 AGAVAVF---GDRDCSLQRRNQKVVEEAPAPDLPPVVRQTIHQASRALAA 263


>gi|116617812|ref|YP_818183.1| phosphoribosylamine--glycine ligase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116096659|gb|ABJ61810.1| phosphoribosylamine--glycine ligase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 414

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L+KYN+P A+ + ++S + A  AI     P+ V K    A G+G
Sbjct: 109 KNILQKYNIPTAQSITVTSFNEANQAIAKFGFPI-VFKLDGLALGKG 154


>gi|323357633|ref|YP_004224029.1| phosphoribosylamine-glycine ligase [Microbacterium testaceum
           StLB037]
 gi|323274004|dbj|BAJ74149.1| phosphoribosylamine-glycine ligase [Microbacterium testaceum
           StLB037]
          Length = 423

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 15/104 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP  + V  S +   E+A+     P YVVK+   A G+             
Sbjct: 106 AKRIMDAAGVPTGRAVRASDLPTVEAALDEYGAP-YVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
            GV V S  ++ I+     L +  +  +   +G  V+  ++ DG
Sbjct: 152 -GVIVTSDREAAIAHAATYLATGAVLVEEFLSGPEVSLFFLSDG 194


>gi|322807919|emb|CBZ05494.1| biotin carboxylase of acetyl-CoA carboxylase [Clostridium botulinum
           H04402 065]
          Length = 448

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +  + +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIAEEIGYPIVVKAS 160


>gi|307594717|ref|YP_003901034.1| phosphoribosylaminoimidazole carboxylase, ATPase [Vulcanisaeta
           distributa DSM 14429]
 gi|307549918|gb|ADN49983.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Vulcanisaeta distributa DSM 14429]
          Length = 374

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 4/84 (4%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            I E   K  LR    PV   ++I+     + A +     +   + Q    GRG+    +
Sbjct: 96  KIRE---KVFLRDNGFPVPNFMIINGPEDVDRAFEQFG-RVVFKEPQGAYDGRGQYYVMK 151

Query: 62  LPADSKGGVRVESSLKSVISDIRE 85
               SK   +     +  +   +E
Sbjct: 152 REDLSKVPRKFPLLAEEFVDIRKE 175


>gi|296188911|ref|XP_002742552.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           isoform 3 [Callithrix jacchus]
          Length = 681

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAKVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALAKAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            I+   D   N Y  F + +  L   +P+     G
Sbjct: 334 TIEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|251797846|ref|YP_003012577.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp.
           JDR-2]
 gi|247545472|gb|ACT02491.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus sp.
           JDR-2]
          Length = 1072

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALLR  N+   +G  ++SV  A    + L  P+ V  S +  G   +  + +    S   
Sbjct: 681 ALLRNLNIAQPEGSTVTSVDQAVETAQKLGYPVLVRPSYVLGGRAMEIVYSDEELLSYME 740

Query: 70  VRVESSLKSVISDIREILGST 90
           V V+ + +  +   R +LG  
Sbjct: 741 VAVKINPEHPVLIDRYMLGKE 761



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+R+   PV + V++++V  A +    +  P+ V
Sbjct: 133 RDLMRELEQPVPESVIVTTVEEAVTFANEIGYPIIV 168


>gi|119946003|ref|YP_943683.1| GCN5-related N-acetyltransferase [Psychromonas ingrahamii 37]
 gi|119864607|gb|ABM04084.1| GCN5-related N-acetyltransferase [Psychromonas ingrahamii 37]
          Length = 897

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 25/160 (15%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +A ++ + +  + D  E  +        N  +      +  + NG GL +  +D +   G
Sbjct: 262 DAAFKRVGMLRVYDFHELFAAVETLAYSNYLHGE---RLAIITNGGGLGVLAVDDLVEQG 318

Query: 291 GAPA-----------NFL----------DVGGGADQDKVAAAFKIITSDSSVKGILI-NI 328
           G  A           N L          D+ G AD  + A A  I+ +   V  ILI + 
Sbjct: 319 GRLAELDDDLMTRLNNCLPSNWSHNNPVDMIGDADPKRYATALNILMNSDQVDAILIMHS 378

Query: 329 FGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
              +   +   + I+  +++      + +       D   
Sbjct: 379 PSALSDSEACARAIIDVIEKHPNKKRVNLLTNWTGEDAAK 418


>gi|15238482|ref|NP_198386.1| CAC2; acetyl-CoA carboxylase/ biotin carboxylase [Arabidopsis
           thaliana]
 gi|75317871|sp|O04983|ACCC_ARATH RecName: Full=Biotin carboxylase, chloroplastic; AltName:
           Full=Acetyl-CoA carboxylase subunit A; Short=ACC; Flags:
           Precursor
 gi|1905876|gb|AAC09008.1| biotin carboxylase subunit [Arabidopsis thaliana]
 gi|1916300|gb|AAC09009.1| heteromeric acetyl-CoA carboxylase biotin carboxylase subunit
           [Arabidopsis thaliana]
 gi|3047099|gb|AAC13611.1| Arabidopsis thaliana biotin carboxylase subunit (GB:U90879)
 gi|10178099|dbj|BAB11486.1| acetyl-CoA carboxylase, biotin carboxylase [Arabidopsis thaliana]
 gi|21554097|gb|AAM63178.1| acetyl-CoA carboxylase [Arabidopsis thaliana]
 gi|23297085|gb|AAN13088.1| acetyl-CoA carboxylase [Arabidopsis thaliana]
 gi|332006573|gb|AED93956.1| biotin carboxylase [Arabidopsis thaliana]
          Length = 537

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S   A      +  P+ ++K+    GGRG    KE    
Sbjct: 191 ARETMKNAGVPTVPGSDGLLQSTEEAVRVANEIGFPV-MIKATAGGGGRGMRLAKEPG-- 247

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 248 -----EFVKLLQQAKSEAAAAFGND 267


>gi|121727035|ref|ZP_01680226.1| phosphoribosylamine--glycine ligase [Vibrio cholerae V52]
 gi|254225656|ref|ZP_04919263.1| phosphoribosylamine--glycine ligase [Vibrio cholerae V51]
 gi|121630546|gb|EAX62936.1| phosphoribosylamine--glycine ligase [Vibrio cholerae V52]
 gi|125621776|gb|EAZ50103.1| phosphoribosylamine--glycine ligase [Vibrio cholerae V51]
 gi|327483147|gb|AEA77554.1| Phosphoribosylamine--glycine ligase [Vibrio cholerae LMA3894-4]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|325281361|ref|YP_004253903.1| carbamoyl-phosphate synthase, large subunit [Odoribacter
           splanchnicus DSM 20712]
 gi|324313170|gb|ADY33723.1| carbamoyl-phosphate synthase, large subunit [Odoribacter
           splanchnicus DSM 20712]
          Length = 1071

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 28/122 (22%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+ +V   + +  +S+  A +A K L  P+ V  +    G                G  
Sbjct: 133 LREIDVKTPRSIAANSMEEAIAASKELGFPIIVRAAYTLGGL---------------GSG 177

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S  + +          +               V +E+     +E+   ++ D+    +
Sbjct: 178 FCSDEEELRKLAASAFSYS-------------PQVLIEESLKGWKEVEYEVVRDQYDNCI 224

Query: 132 AF 133
             
Sbjct: 225 TV 226


>gi|300864697|ref|ZP_07109553.1| cyanophycin synthetase [Oscillatoria sp. PCC 6506]
 gi|300337303|emb|CBN54701.1| cyanophycin synthetase [Oscillatoria sp. PCC 6506]
          Length = 636

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG----RFKELPA 64
           KA L     PV KG ++++ + A +A + +  P+ V K  +   G G        +EL A
Sbjct: 221 KAFLATLGFPVPKGDIVTTENGAIAAAREIDYPVAV-KPVVGHKGIGVTADIQDAEELAA 279

Query: 65  DSKGGVRVESSLKSVISDIRE 85
             K  V+       V   + +
Sbjct: 280 AFKRAVKAIPEQAPVRVIVEQ 300


>gi|261210435|ref|ZP_05924729.1| phosphoribosylamine--glycine ligase [Vibrio sp. RC341]
 gi|260840493|gb|EEX67059.1| phosphoribosylamine--glycine ligase [Vibrio sp. RC341]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|258404458|ref|YP_003197200.1| carbamoyl-phosphate synthase, large subunit [Desulfohalobium
           retbaense DSM 5692]
 gi|257796685|gb|ACV67622.1| carbamoyl-phosphate synthase, large subunit [Desulfohalobium
           retbaense DSM 5692]
          Length = 1078

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 33/161 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + V +  + SS+        TL  P+ V  +    G             + GGV    +
Sbjct: 140 GLTVPQSGIASSLEEVREWTNTLSFPMIVRPAFTLGG-------------TGGGV--AYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            + +    R+ L ++             + V +E+     +E  L ++ D+       I 
Sbjct: 185 REDLEEIARQGLAAS-----------PSHEVMLEESVLGWKEYELEVMRDKHDNC-VIIC 232

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           S      IE +          + + P   +T  +   + D 
Sbjct: 233 S------IENLDAMGVHTGDSVTVAPAQTLTDREFQKMRDA 267


>gi|229816187|ref|ZP_04446497.1| hypothetical protein COLINT_03234 [Collinsella intestinalis DSM
           13280]
 gi|229808195|gb|EEP43987.1| hypothetical protein COLINT_03234 [Collinsella intestinalis DSM
           13280]
          Length = 435

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 28/193 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+ +  +P A     +   +A + ++    P+ VVK+   A G+             
Sbjct: 113 SKELMARAGIPTAAYGSFADEESALAYVREQGAPV-VVKADGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L   +  + E           G  G   + V +E+      E  L    D  
Sbjct: 159 -GVVVALTLDEALQAVHECFD-----GAFGAAG---STVVIEEMLT-GPECTLLAFTDGK 208

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-D 186
           +      +         ++  +         +     VT E+ A +C +L+    A   +
Sbjct: 209 TVRPMATSQDHKRALEGDLGPNTGGMGVYSPVPI---VTDEEHAEMCRILDETIAAANRE 265

Query: 187 GGDLFPNLYKAFC 199
           G D    LY  F 
Sbjct: 266 GIDFRGCLYGGFM 278


>gi|182415832|ref|YP_001820898.1| phosphoribosylamine--glycine ligase [Opitutus terrae PB90-1]
 gi|177843046|gb|ACB77298.1| phosphoribosylamine--glycine ligase [Opitutus terrae PB90-1]
          Length = 430

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L+KY +P A     +    A + ++  P P+ VVK+   A G+G
Sbjct: 111 KEILQKYGIPTAPAAFFTEPEPAIAYLRARPAPI-VVKADGLAAGKG 156


>gi|148227451|ref|NP_001089298.1| propionyl CoA carboxylase, alpha polypeptide [Xenopus laevis]
 gi|59862015|gb|AAH90253.1| Pcca protein [Xenopus laevis]
          Length = 710

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 161 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 205

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 206 GGGKGMRIAWDDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDDPRHIEIQVLA 258

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   ++     
Sbjct: 259 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALAKAVKYSSAG 315

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 316 TVEFLVDSKRNFY--FLEMNTRLQVEHPITECITG 348


>gi|153823370|ref|ZP_01976037.1| phosphoribosylamine--glycine ligase [Vibrio cholerae B33]
 gi|254851409|ref|ZP_05240759.1| phosphoribosylamine-glycine ligase [Vibrio cholerae MO10]
 gi|255744078|ref|ZP_05418032.1| phosphoribosylamine--glycine ligase [Vibrio cholera CIRS 101]
 gi|126519111|gb|EAZ76334.1| phosphoribosylamine--glycine ligase [Vibrio cholerae B33]
 gi|254847114|gb|EET25528.1| phosphoribosylamine-glycine ligase [Vibrio cholerae MO10]
 gi|255738343|gb|EET93734.1| phosphoribosylamine--glycine ligase [Vibrio cholera CIRS 101]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|315172444|gb|EFU16461.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX1346]
          Length = 1066

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELEIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|256752936|ref|ZP_05493766.1| cobalamin B12-binding domain protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748181|gb|EEU61255.1| cobalamin B12-binding domain protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 1176

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 7/141 (4%)

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQD 306
           EE   +++ K  +  Y  +   + C     GL M    ++       A    +G GA+  
Sbjct: 779 EEAIEDLKDKIGDFVYSEM---LACSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIK 835

Query: 307 KVAAAFKIITSDSSVKGILINIF---GGIMRCD-VLVKGILSAVKEVKINIPLVMRLEGA 362
            + A     T    +K I  NI    GG+   D          + E+K+N+P++      
Sbjct: 836 LITAGKLRRTDLEKIKQIKPNIILLAGGVDFGDRETALYNAEKLAEMKLNVPVIYAGNIE 895

Query: 363 NVDIGNRLIAESGLNVITAID 383
           N +  + +  E+   V    +
Sbjct: 896 NREEISYIFQEASQEVYIVDN 916


>gi|304317525|ref|YP_003852670.1| phosphoribosylamine/glycine ligase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779027|gb|ADL69586.1| phosphoribosylamine/glycine ligase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 416

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 25/128 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KYN+P A+        AA + +K +  P+ V+K+   A  +GKG F         
Sbjct: 107 KLLLHKYNIPTARFKAFDRYDAALNFLKDIWYPV-VIKADGLA--QGKGVF--------- 154

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                  L     D +E L   +  K+ G +G   + V +E+         +S+L     
Sbjct: 155 -------LADNFKDAKESLDILMKEKRFGSSG---DTVIIEEMLFGKE---VSVLAFTDG 201

Query: 129 GMVAFIAS 136
             +  + S
Sbjct: 202 NTIVPMVS 209


>gi|170290751|ref|YP_001737567.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174831|gb|ACB07884.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 482

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 42/198 (21%)

Query: 231 NALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG 290
           +A +R   +  + D+ E       AK  ++   A   +I  + +G G+ +   D  +  G
Sbjct: 283 DAAFRQAGVIRVMDMEELFD---AAKALSMQPPAEGESIAILTDGGGVGVMAADETEAVG 339

Query: 291 GAPANF--------------------------LDVGGGADQDKVAAAFKIITSDSSVKGI 324
              A F                          +D+ G A  D    A + I  D  V G+
Sbjct: 340 LKLAEFSDSTKEKLKELQRANVIPPIAALGNPIDLTGSATDDSFVGAMEAILEDPGVHGV 399

Query: 325 LINIFGGIMRCDVLVKGILSAVKEV--KINIPLVMRLEGAN--VDIGNRLIAESGLNVIT 380
           ++     +     +   +   + EV  +   P+V    G++       ++    G+    
Sbjct: 400 VVLALHHVP---GVTWELPRKLAEVVKRYKKPVVAMDVGSSQYAVEFRKMFEREGIPAYP 456

Query: 381 AIDLDDAAQKIVHAVKGV 398
                   ++ V A+K +
Sbjct: 457 EP------ERAVKAMKAL 468


>gi|147676840|ref|YP_001211055.1| carbamoylphosphate synthase large subunit [Pelotomaculum
           thermopropionicum SI]
 gi|189081831|sp|A5D508|CARB_PELTS RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|146272937|dbj|BAF58686.1| carbamoylphosphate synthase large subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 1083

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 70/228 (30%), Gaps = 41/228 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   PV +  +  SV    +    +  P+ V  +    G             + G
Sbjct: 133 KNLMLEIGEPVPRSTIAGSVEECLAFAGEIGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+      + ++      L  ++I             V +E      +E+   ++ D   
Sbjct: 180 GI--ACREQELVEIAGRGLKMSMIG-----------QVLLEQSVAGWKEIEYEVMRDGAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   ++ ++          +   L+++G
Sbjct: 227 NCITV-------CNMENVDPVGIHTGDSIVVAPSQTLSDKEYQLLRSAALRIIRALKVEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
              +       ++     + +  +   + L     G     + +KI+ 
Sbjct: 280 GCNVQFALDLNSMAYYVIEVNPRVSRSSALASKATGYPIAKVAAKIAV 327



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL    +P ++G    +V  A++  + L  P+ V  S +  G
Sbjct: 674 KLLTGLGIPQSEGRSAVNVEEAQAVAEKLGYPVLVRPSYVLGG 716


>gi|86360395|ref|YP_472283.1| putative urea amidolyase protein [Rhizobium etli CFN 42]
 gi|86284497|gb|ABC93556.1| putative urea amidolyase protein [Rhizobium etli CFN 42]
          Length = 1179

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 81/224 (36%), Gaps = 37/224 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L R   VP+  G  ++S    A +A++ +  P+ ++KS    GG G     +  +  
Sbjct: 119 ARELARASGVPLLPGTGLLSRADEALAAVERIGYPV-MLKSTAGGGGIGMQLCADAES-- 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +++S +SV    R   G                 VY+E      R + + +  + 
Sbjct: 176 -----LKASFESVQRTARASFGDA--------------RVYIERFVAEARHVEVQIFGNG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQARI 185
                  IA  +    ++   +   ++       P  G+++   A L    ++L      
Sbjct: 217 QGK---VIALGERDCSLQRRNQKVVEET------PAPGLSAATRARLHKSAIDLGAAVSY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +       +Y     ++   LE+N  + +++    V ++    D
Sbjct: 268 ESAGTVEFIYDP-QREEFYFLEVNTRLQVEHP---VTEAVFGID 307


>gi|315037128|gb|EFT49060.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX0027]
 gi|315169607|gb|EFU13624.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX1342]
          Length = 1066

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELEIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGG 720



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214


>gi|238752951|ref|ZP_04614412.1| hypothetical protein yrohd0001_3050 [Yersinia rohdei ATCC 43380]
 gi|238708812|gb|EEQ01069.1| hypothetical protein yrohd0001_3050 [Yersinia rohdei ATCC 43380]
          Length = 880

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLNMLPTWIASDSVEAVHIAERIGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 AHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +++  D   G +  +   +GG++   
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEWHH 610


>gi|254173588|ref|ZP_04880260.1| acetyl coenzyme A synthetase (ADP forming), alpha domain
           [Thermococcus sp. AM4]
 gi|214032280|gb|EEB73110.1| acetyl coenzyme A synthetase (ADP forming), alpha domain
           [Thermococcus sp. AM4]
          Length = 463

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 16/181 (8%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F    + R L I E  D +   S   E +  NL  I   G IG M   A           
Sbjct: 275 FKQAGVIRALTIGEAFDYARTLSNLPEPEGENLVIITNGGGIGVMATDAAEEAGLHLYDN 334

Query: 288 LYGGAP-ANFL----------DVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRC 335
           L      AN +          D+ G A  +    A +   +   +  I +      ++  
Sbjct: 335 LEELKIFANHMPPFGSYKNPVDLTGMAGAESYEGAVRDALAHPEMHSIAVLYCQTAVLDP 394

Query: 336 DVLVKGILSAVKEVKINIPLVMRL-EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
             L K ++    E     PLV+ +  G        ++ E G+         + A K + A
Sbjct: 395 RDLAKIVIREYNESGRKKPLVVAIVGGIEAKEAIDMLNEEGIPAYPEP---ERAIKALAA 451

Query: 395 V 395
           +
Sbjct: 452 L 452


>gi|116624721|ref|YP_826877.1| pyruvate carboxylase [Candidatus Solibacter usitatus Ellin6076]
 gi|116227883|gb|ABJ86592.1| pyruvate carboxylase [Candidatus Solibacter usitatus Ellin6076]
          Length = 1174

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 30/184 (16%)

Query: 8   AKALLRKYNVP-VAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           A+ L +K  +P V  G    ++S   AE    T+  P  ++K+    GGRG     + P 
Sbjct: 148 ARRLAQKAGIPRVP-GTEEAVTSPKQAEKIAATIGYP-LIIKAAFGGGGRGMRVVDKAPD 205

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                      L+    +     G+                V++E      + + + +L 
Sbjct: 206 -------FAGKLEEARRESAAAFGND--------------AVFLERFVRRAKHIEVQILG 244

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQA 183
           DR       +   +    ++   +   +    + +DP I     D A +L          
Sbjct: 245 DRHGN---ILHLYERDCSVQRRHQKVVEVAPAVGLDPKIRAQLADAAVTLARAAGYTNAG 301

Query: 184 RIDG 187
            ++ 
Sbjct: 302 TVEF 305


>gi|22124416|ref|NP_667839.1| phosphoribosylamine--glycine ligase [Yersinia pestis KIM 10]
 gi|45442846|ref|NP_994385.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|21957200|gb|AAM84090.1|AE013651_3 phosphoribosylglycinamide synthetase [Yersinia pestis KIM 10]
 gi|45437712|gb|AAS63262.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Microtus str. 91001]
          Length = 436

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V AA + ++    P+ V+K+   A G+              
Sbjct: 117 KDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPI-VIKADGLAAGK-------------- 161

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 162 GVIVAMTQEEAETAVNDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 213

Query: 129 GMVA 132
            +  
Sbjct: 214 VLPM 217


>gi|325297960|ref|YP_004257877.1| acetyl-CoA carboxylase, biotin carboxylase [Bacteroides
           salanitronis DSM 18170]
 gi|324317513|gb|ADY35404.1| acetyl-CoA carboxylase, biotin carboxylase [Bacteroides
           salanitronis DSM 18170]
          Length = 503

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 27/148 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + SV  A+     +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSVEEAKEICNRIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V         +T  ++     G   + VY+E   +    +   +L D     V  
Sbjct: 172 HSEDEVEEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNYGNAVHL 224

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDP 161
               +    I+   +   ++     + P
Sbjct: 225 F---ERECSIQRRNQKIVEETPSPFVTP 249


>gi|307330550|ref|ZP_07609691.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306883799|gb|EFN14844.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 375

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 69/280 (24%), Gaps = 82/280 (29%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLP---GPLYVVKSQIHAGGRGKGRFKELPAD 65
           +  L +  VP  +  +++                G   V+K+ +  G  GKG +      
Sbjct: 100 RERLSEAGVPCPRHRIVADPEDVARFAAEAGEGDGFPVVLKT-VRGGYDGKGVWVVRGVG 158

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                             R               G  V     E+  D  REL  +++  
Sbjct: 159 ------------EAAEPFR--------------AGVPV---LAEEMVDFARELAANVVRS 189

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLE 178
                          +    V       +   +I P  G++        E    +   L 
Sbjct: 190 PHGQ----------AVAYPVVESIQVDGVCDTVIAPAPGLSEELSGTAQEMALKIAAELG 239

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLII--------MKNGRL---RVLDSKIS 227
           + G   ++           F  +D  LL +N L +         ++G +        +  
Sbjct: 240 VVGHLAVE----------LFETRDGRLL-VNELAMRPHNSGHWTQDGAVTSQFANHVRAV 288

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG 267
            D            L D        +        Y  + G
Sbjct: 289 LD----------LPLGDPRPRAPWTVMTNVLGGDYPDMYG 318


>gi|306812020|ref|ZP_07446228.1| phosphoribosylamine--glycine ligase [Escherichia coli NC101]
 gi|305854625|gb|EFM55061.1| phosphoribosylamine--glycine ligase [Escherichia coli NC101]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLAEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|300724320|ref|YP_003713638.1| hypothetical protein XNC1_3486 [Xenorhabdus nematophila ATCC 19061]
 gi|297630855|emb|CBJ91526.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 421

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+A+LR+++VP  +  V  +   A +       P ++ K            F  L A   
Sbjct: 119 ARAILREHHVPTIRSWVAYTPDEANAIFTQYTSP-FIFKPV--------SGFDSLHAVK- 168

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
                 S+ + V     +IL +     Q          + +E+   
Sbjct: 169 -----VSTHEEVTKAAMDILNAGKNIAQPYRE-IFSRGILIEEFLS 208


>gi|295837391|ref|ZP_06824324.1| carboxylase [Streptomyces sp. SPB74]
 gi|295826511|gb|EDY43029.2| carboxylase [Streptomyces sp. SPB74]
          Length = 408

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 26/173 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL +  VP A+ + + S H A  A  T+  P+ V+K   HA              S G
Sbjct: 108 RRLLAEAGVPSARSIRVQSAHEAAQAAATIGYPV-VLKPASHAA-------------SIG 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            ++   S     +       +     + GP G     V VE+  D      +S+     +
Sbjct: 154 VIKAARS----EALAEAWEFANAGAGEQGPEGH---GVLVEEYLDGPE---ISVECMTFA 203

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
           G    +A T+  +      ++    + +   DPL+ + S         L +  
Sbjct: 204 GETVALAVTRKEVAFAPFFEEVGHTVERD--DPLLPLVSPVARQALAALGVTD 254


>gi|294785968|ref|ZP_06751255.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           3_1_27]
 gi|294486305|gb|EFG33668.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           3_1_27]
          Length = 1058

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 168


>gi|294506359|ref|YP_003570417.1| Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
           [Salinibacter ruber M8]
 gi|294342687|emb|CBH23465.1| Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
           [Salinibacter ruber M8]
          Length = 506

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 33/172 (19%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+++  VP+A G    ++S    E+  + +  P+ +               K     
Sbjct: 128 ARQLMKEAGVPMAPGTTDAVASTEEGEAIAEDIGYPVLI---------------KAAAGG 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+    +     +    G    +   G        V++E   +  R +   +L D
Sbjct: 173 GGKGMRIVHEPEHFAGAMDRAQGEAASSFGDG-------RVFIEKYIEEPRHIEFQILAD 225

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
                     +T    + E   +   QK+ +    P   +T E    + +  
Sbjct: 226 HH-------GNTVHLFERECSIQRRHQKVIEEA--PSSVLTPEVRREMGEAA 268


>gi|256846778|ref|ZP_05552233.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           3_1_36A2]
 gi|256717744|gb|EEU31302.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           3_1_36A2]
          Length = 1058

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 168


>gi|257052577|ref|YP_003130410.1| alpha-L-glutamate ligase, RimK family [Halorhabdus utahensis DSM
           12940]
 gi|256691340|gb|ACV11677.1| alpha-L-glutamate ligase, RimK family [Halorhabdus utahensis DSM
           12940]
          Length = 291

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++  VP     V  +   A   I+    P  V+K  I + GR   +             
Sbjct: 97  LQQAGVPTPTTEVAFTKDTALEIIEDFGYPC-VLKPVIGSWGRLMAKID----------- 144

Query: 72  VESSLKSVISDIREILGS 89
                   I + +  LG 
Sbjct: 145 -TRDAAEAILEHKATLGH 161


>gi|110669563|ref|YP_659374.1| arginine biosynthesis regulator [Haloquadratum walsbyi DSM 16790]
 gi|109627310|emb|CAJ53800.1| probable arginine biosynthesis regulator (lysine biosynthesis
           regulator lysX homolog) [Haloquadratum walsbyi DSM
           16790]
          Length = 299

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 17/108 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+   VP  +  V  +  +A  +I+    P  ++K  + + GR   +             
Sbjct: 97  LQSAEVPTPRTEVAFTTDSAMESIERFGYPC-ILKPVVGSWGRLMAKIDSA--------- 146

Query: 72  VESSLKSVISDIREILG----STLITKQTGPTGSRVNCVYVEDGADIL 115
              S    I + +  LG         ++      R   V   DG  I 
Sbjct: 147 ---SAAEAILEHKSTLGHYEHKVFYIQEFVSKPGRDIRVLAADGEPIA 191


>gi|194333425|ref|YP_002015285.1| carbamoyl-phosphate synthetase large chain domain-containing
           protein [Prosthecochloris aestuarii DSM 271]
 gi|194311243|gb|ACF45638.1| Carbamoyl-phosphate synthetase large chain domain protein
           [Prosthecochloris aestuarii DSM 271]
          Length = 618

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 38/202 (18%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+LR+ N+P        S   A+   + +  P+ V  S +  G                 
Sbjct: 214 AVLRELNIPHPDYDTAISYEEAQEITRRIGYPVLVRPSYVLGG---------------RA 258

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S  S+   + + L  T    +  P       + ++   +   E  +  + D T  
Sbjct: 259 MKIIYSDDSLKEYVDQALFIT----EKYP-------LLIDRFLETAVEFDIDAIADTTDC 307

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQARIDGG 188
           +V+ I        I          +    I+P +     E    L + + + G   +   
Sbjct: 308 VVSGIMQHVEAAGIHSGDSTS--ILPYHNINPEVIKTMKEYTRRLAERIGVVGLMNVQYA 365

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               ++Y         ++E+NP
Sbjct: 366 VQNDSVY---------VIEVNP 378


>gi|34762313|ref|ZP_00143317.1| Carbamoyl-phosphate synthase large chain [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27888035|gb|EAA25098.1| Carbamoyl-phosphate synthase large chain [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 1058

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 168


>gi|311742358|ref|ZP_07716167.1| carbamoyl-phosphate synthase, large subunit [Aeromicrobium marinum
           DSM 15272]
 gi|311313986|gb|EFQ83894.1| carbamoyl-phosphate synthase, large subunit [Aeromicrobium marinum
           DSM 15272]
          Length = 1144

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 12/77 (15%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +P  K    ++   A++    +  P+ V  S +  GGRG              
Sbjct: 682 RVLAEAGLPAPKHGTATTFAGAQAIADEIGYPVLVRPSYVL-GGRGM-----------EI 729

Query: 70  VRVESSLKSVISDIREI 86
           V  E +L+  I    EI
Sbjct: 730 VYDEQTLEEYIDRATEI 746


>gi|262163816|ref|ZP_06031556.1| phosphoribosylamine--glycine ligase [Vibrio mimicus VM223]
 gi|262027796|gb|EEY46461.1| phosphoribosylamine--glycine ligase [Vibrio mimicus VM223]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|317046831|ref|YP_004114479.1| urea carboxylase [Pantoea sp. At-9b]
 gi|316948448|gb|ADU67923.1| urea carboxylase [Pantoea sp. At-9b]
          Length = 1205

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 6   YQAKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++A+ L     VP+  G  ++SS+  A  A + +  P+ ++KS    GG G
Sbjct: 117 HRARELAASAGVPMTPGTPLLSSLEEALDAAERIGYPV-MLKSTAGGGGIG 166


>gi|227494303|ref|ZP_03924619.1| phosphoribosylamine-glycine ligase [Actinomyces coleocanis DSM
           15436]
 gi|226832037|gb|EEH64420.1| phosphoribosylamine-glycine ligase [Actinomyces coleocanis DSM
           15436]
          Length = 730

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A  +   +    ++AIK+   P YVVK+   A G+G    ++  A   
Sbjct: 105 AKEIMAAAGVKTAGSITCRTQAEVDAAIKSFN-PPYVVKNDGLAAGKGVVVTEDFDAALA 163

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                  +    +    E L    ++      G  V  V ++   D  R
Sbjct: 164 HAYACVEADGGAVVF-EEYLAGPEVSLFCISDGKTV--VPLQPAQDFKR 209


>gi|254383574|ref|ZP_04998924.1| carbamoyl-phosphate synthase large chain [Streptomyces sp. Mg1]
 gi|194342469|gb|EDX23435.1| carbamoyl-phosphate synthase large chain [Streptomyces sp. Mg1]
          Length = 1102

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLADAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|37676443|ref|NP_936839.1| acyl-CoA synthetase [Vibrio vulnificus YJ016]
 gi|37200985|dbj|BAC96809.1| acyl-CoA synthetase [Vibrio vulnificus YJ016]
          Length = 892

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 75/223 (33%), Gaps = 25/223 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ ++  V    + S    A    + +  P+ V         + +       +D +G +
Sbjct: 499 LLKLFHFDVLPTWIASDTSEAVHIAEQIGYPVAV---------KLRSPDIAHKSDVQGVM 549

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
               + + V S    IL  T +   +      ++ + V+  A +    E+ + ++ D+  
Sbjct: 550 LNLRNSQEVASAADAILDRTKLAYPSAN----IHGLLVQGMAKLAGGEEIRVKVITDKVF 605

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARIDG 187
           G V  +   QGG +  E             + PL + +    +        ++ Q   + 
Sbjct: 606 GPVILLG--QGGSEWSEARDATA------ALPPLNMTLARYQIVRAIKEGHIRLQKLPEP 657

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            D+   L K        ++E+  +  +    +       +  D
Sbjct: 658 MDVL-GLAKFLVRISQMVVELPQIKELDIHPVLANGEHFTILD 699


>gi|15640304|ref|NP_229931.1| phosphoribosylamine--glycine ligase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586357|ref|ZP_01676146.1| phosphoribosylamine--glycine ligase [Vibrio cholerae 2740-80]
 gi|153818472|ref|ZP_01971139.1| phosphoribosylamine--glycine ligase [Vibrio cholerae NCTC 8457]
 gi|227080489|ref|YP_002809040.1| phosphoribosylamine-glycine ligase [Vibrio cholerae M66-2]
 gi|262161967|ref|ZP_06030984.1| phosphoribosylamine--glycine ligase [Vibrio cholerae INDRE 91/1]
 gi|298500910|ref|ZP_07010712.1| phosphoribosylamine-glycine ligase [Vibrio cholerae MAK 757]
 gi|20139786|sp|Q9KV81|PUR2_VIBCH RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|9654685|gb|AAF93450.1| phosphoribosylamine--glycine ligase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549477|gb|EAX59505.1| phosphoribosylamine--glycine ligase [Vibrio cholerae 2740-80]
 gi|126510948|gb|EAZ73542.1| phosphoribosylamine--glycine ligase [Vibrio cholerae NCTC 8457]
 gi|227008377|gb|ACP04589.1| phosphoribosylamine-glycine ligase [Vibrio cholerae M66-2]
 gi|262028345|gb|EEY47001.1| phosphoribosylamine--glycine ligase [Vibrio cholerae INDRE 91/1]
 gi|297540414|gb|EFH76473.1| phosphoribosylamine-glycine ligase [Vibrio cholerae MAK 757]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|108809593|ref|YP_653509.1| phosphoribosylamine--glycine ligase [Yersinia pestis Antiqua]
 gi|108810402|ref|YP_646169.1| phosphoribosylamine--glycine ligase [Yersinia pestis Nepal516]
 gi|153950785|ref|YP_001402795.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis IP
           31758]
 gi|153997237|ref|ZP_02022344.1| phosphoribosylamine--glycine ligase [Yersinia pestis CA88-4125]
 gi|165928312|ref|ZP_02224144.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938184|ref|ZP_02226743.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166012044|ref|ZP_02232942.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166214394|ref|ZP_02240429.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167402425|ref|ZP_02307885.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167422936|ref|ZP_02314689.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426824|ref|ZP_02318577.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218930734|ref|YP_002348609.1| phosphoribosylamine--glycine ligase [Yersinia pestis CO92]
 gi|229837476|ref|ZP_04457638.1| phosphoribosylamine-glycine ligase [Yersinia pestis Pestoides A]
 gi|229839411|ref|ZP_04459570.1| phosphoribosylamine-glycine ligase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229899973|ref|ZP_04515113.1| phosphoribosylamine-glycine ligase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900578|ref|ZP_04515704.1| phosphoribosylamine-glycine ligase [Yersinia pestis Nepal516]
 gi|270488933|ref|ZP_06206007.1| phosphoribosylamine--glycine ligase [Yersinia pestis KIM D27]
 gi|294505400|ref|YP_003569462.1| phosphoribosylamine--glycine ligase [Yersinia pestis Z176003]
 gi|20139500|sp|Q8ZAR2|PUR2_YERPE RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|108774050|gb|ABG16569.1| phosphoribosylamine--glycine ligase [Yersinia pestis Nepal516]
 gi|108781506|gb|ABG15564.1| phosphoribosylamine--glycine ligase [Yersinia pestis Antiqua]
 gi|115349345|emb|CAL22316.1| phosphoribosylamine--glycine ligase [Yersinia pestis CO92]
 gi|149289345|gb|EDM39424.1| phosphoribosylamine--glycine ligase [Yersinia pestis CA88-4125]
 gi|152962280|gb|ABS49741.1| phosphoribosylamine--glycine ligase [Yersinia pseudotuberculosis IP
           31758]
 gi|165913845|gb|EDR32463.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919651|gb|EDR36984.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989039|gb|EDR41340.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166204398|gb|EDR48878.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166957147|gb|EDR55168.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167048205|gb|EDR59613.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167054206|gb|EDR64031.1| phosphoribosylamine--glycine ligase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229682398|gb|EEO78488.1| phosphoribosylamine-glycine ligase [Yersinia pestis Nepal516]
 gi|229686958|gb|EEO79034.1| phosphoribosylamine-glycine ligase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229695777|gb|EEO85824.1| phosphoribosylamine-glycine ligase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229704164|gb|EEO91175.1| phosphoribosylamine-glycine ligase [Yersinia pestis Pestoides A]
 gi|262363466|gb|ACY60187.1| phosphoribosylamine--glycine ligase [Yersinia pestis D106004]
 gi|262367394|gb|ACY63951.1| phosphoribosylamine--glycine ligase [Yersinia pestis D182038]
 gi|270337437|gb|EFA48214.1| phosphoribosylamine--glycine ligase [Yersinia pestis KIM D27]
 gi|294355859|gb|ADE66200.1| phosphoribosylamine--glycine ligase [Yersinia pestis Z176003]
 gi|320013671|gb|ADV97242.1| phosphoribosylamine-glycine ligase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 428

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V AA + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTQEEAETAVNDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|300697538|ref|YP_003748199.1| Biotin carboxylase (acetyl-CoA carboxylase subunit A) (ACC)
           [Ralstonia solanacearum CFBP2957]
 gi|299074262|emb|CBJ53807.1| Biotin carboxylase (Acetyl-CoA carboxylase subunit A) (ACC)
           [Ralstonia solanacearum CFBP2957]
          Length = 455

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 111/334 (33%), Gaps = 47/334 (14%)

Query: 8   AKALLRKYNVPVAKG---VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R+  VP   G    +     A  +    +  P+ +VK+    GGRG    +E  A
Sbjct: 119 AKRAMREAGVPCVPGPDTSLPDDPAAVLAIAHEIGFPV-IVKAAGGGGGRGMRVVQEAAA 177

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            +               + R   G+                VY+E      R + + +L 
Sbjct: 178 LADALTLT-------REEARRAFGNP--------------EVYIEKFLTHPRHVEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQA 183
           DR      ++ S      ++   +   ++     IDP LI    E  A+ C  +   G  
Sbjct: 217 DRYGHA-VWLGSR--DCSLQRRHQKVLEEAPAPGIDPALIAEVGERCAAACRQVGYCGVG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQ-- 240
             +        Y  F + +  L   +P+  M +G  +     +++  +    R  DI   
Sbjct: 274 TFEFLYENGAFY--FIEMNTRLQVEHPVTEMTSGIDIVQQQIRVARGEPLTLRQDDIACR 331

Query: 241 --ELR-DVSEEDSREIEAKQHNLSYIALDGNIGCMVN---GAGLAMATMDIIKLYGGAPA 294
              L   ++ E           ++ + L G  G  V+   GAG  + +     +      
Sbjct: 332 GHALECRINAEHPDTFLPSPGVITGLRLPGGYGVRVDTHAGAGYRVPSHYDSMIAKL--- 388

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILINI 328
               +  GA ++      ++   +  V GI  N+
Sbjct: 389 ----IVHGASREDALQRMQLALDELQVDGIATNV 418


>gi|237740837|ref|ZP_04571318.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp.
           4_1_13]
 gi|229431134|gb|EEO41346.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp.
           4_1_13]
          Length = 1058

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 168


>gi|1246215|gb|AAB02980.1| phosphoribosylamine-glycine ligase [Allochromatium vinosum DSM 180]
          Length = 189

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++ +P A   V + +  A + ++ +  P+ VVK+   A G+G      + A + 
Sbjct: 108 AKDFLHRHGIPTAAYGVFTELEPALAYLRQVGAPV-VVKADGLAAGKG-VILAMILATAG 165

Query: 68  GGVR 71
           GGV 
Sbjct: 166 GGVH 169


>gi|163847567|ref|YP_001635611.1| phosphoribosylglycinamide synthetase [Chloroflexus aurantiacus
           J-10-fl]
 gi|163668856|gb|ABY35222.1| phosphoribosylglycinamide synthetase [Chloroflexus aurantiacus
           J-10-fl]
          Length = 422

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 20/105 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L  +  VP     + ++     + ++++  P  V               K L  +   
Sbjct: 117 RQLFARAGVPSPAFRLCTTADDLPTLVQSVTFPCVV---------------KPLRLNGSR 161

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV    +    ++ IR +             G+ V+   +ED   
Sbjct: 162 GVIRADNPAQCLAAIRRLAALL-----DRIEGAGVHEFLIEDFVP 201


>gi|323344538|ref|ZP_08084763.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella oralis
           ATCC 33269]
 gi|323094665|gb|EFZ37241.1| phosphoribosylglycinamide formyltransferase 2 [Prevotella oralis
           ATCC 33269]
          Length = 403

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 41/153 (26%), Gaps = 33/153 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK     +    +SA   +  P  VVK  + + G G+   +       
Sbjct: 128 AKEL----GLRTAKYFYARTFDEFKSAALKIGFPC-VVKPLMSSSGHGQSIVR------- 175

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                            + L         G  G  V  + +E+      E  L  L    
Sbjct: 176 ---------------AEDELHKAFDNAMQGSRGD-VKELIIEEFIRFKSEFTL--LTVTQ 217

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160
                      G +   +   DY +      ID
Sbjct: 218 MNGPTLFCPPIGHV---QKGGDYRESWQPYRID 247


>gi|320032953|gb|EFW14903.1| acetyl-/propionyl-coenzyme A carboxylase subunit alpha
           [Coccidioides posadasii str. Silveira]
          Length = 671

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--- 61
           QAK L     VPV K +    S ++  ++    +  P+ ++K+    GGRG    +    
Sbjct: 124 QAKELAEACGVPVLKAITQPTSDLNVIKAFAAEVGYPV-MIKAVDGGGGRGIRLVRSEDT 182

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR----- 116
           L A     +    S K  +     + G   +  Q    G+       E    I R     
Sbjct: 183 LQASVDRAMGESPSKKVFVEKAA-VEGYHHVEVQVIGDGTGQVRHLWERDCSIQRRFQKI 241

Query: 117 -ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
            E   +L+ DR    +   A+ +    I+ ++    + +    +    
Sbjct: 242 VECAPALMKDRKLICLVIEAALRIANRIKYLSLGTFEFLVNEQVSEFY 289


>gi|299066209|emb|CBJ37393.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Ralstonia
           solanacearum CMR15]
          Length = 422

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P AK     +   A + +     P+ V+K+   A G+             
Sbjct: 106 AKAFMHRHGIPTAKYQTFGNAAEAHAYVDREGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+         +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMTLEEAHGA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +A++Q 
Sbjct: 203 D--VVAMATSQD 212


>gi|295133893|ref|YP_003584569.1| carbamoyl-phosphate synthase large subunit [Zunongwangia profunda
           SM-A87]
 gi|294981908|gb|ADF52373.1| carbamoyl-phosphate synthase large subunit [Zunongwangia profunda
           SM-A87]
          Length = 950

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 28/137 (20%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L+ +  +PVA    ++S    +   +    P  V+++    GG G G   +     
Sbjct: 132 QFKQLMERIGIPVAPAKTVTSYLQGKEVAQEFGFP-LVIRASFTLGGSGAGFVHK----- 185

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                          D  E+L         G   S ++ V ++      +E  L LL  R
Sbjct: 186 -------------AEDFDEML-------TRGLEASPIHEVLIDKALLGWKEYELELL--R 223

Query: 127 TSGMVAFIASTQGGMDI 143
                  I  T   MD 
Sbjct: 224 DKNDNVVIICTIENMDP 240



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 15/80 (18%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+K ++P  +     +   A      L  P+ V  S +  G                G+
Sbjct: 690 LLQKNDIPYPEFGTAENAEEALKLADQLDFPILVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREILGST 90
           ++  + + +   + ++L   
Sbjct: 735 KIVINKQELEETVVDLLRKI 754


>gi|294786970|ref|ZP_06752224.1| carbamoyl-phosphate synthase, large subunit [Parascardovia
           denticolens F0305]
 gi|315226609|ref|ZP_07868397.1| carbamoyl-phosphate synthase [Parascardovia denticolens DSM 10105]
 gi|294485803|gb|EFG33437.1| carbamoyl-phosphate synthase, large subunit [Parascardovia
           denticolens F0305]
 gi|315120741|gb|EFT83873.1| carbamoyl-phosphate synthase [Parascardovia denticolens DSM 10105]
          Length = 1076

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 6/92 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++A   L+   +P  +G    +V  A      +  P+ V  S +  GGR     + + 
Sbjct: 672 HEFEAA--LQSLEIPQPEGATAVTVDEALVIANRIGYPVLVRPSYVL-GGRAM---EIVH 725

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQ 95
              +  V + +++K +  D   ++   ++ K+
Sbjct: 726 NGDELKVYMATAVKEISHDAPILVDRYVLGKE 757



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 53/184 (28%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           ++L+ +   PV +  ++ +V  A      L  P+ V  +    G                
Sbjct: 133 RSLMNELGEPVPESDIVHTVEDAVRFAGELGYPVVVRPAYTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     + + +       L  +            V+   +E      +E+   ++  R +
Sbjct: 178 GGGFAHNERELRHIADAGLKMS-----------PVHQCLIERSIAGFKEIEYEVM--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
              A +      +D   V       +    I  L    ++ +      +   L++ G   
Sbjct: 225 HDNAIVVCNMENVDP--VGIHTGDSVVVAPIQTLTDRENQMLRDASLRIIRALKICGGCN 282

Query: 185 IDGG 188
           +   
Sbjct: 283 VQLA 286


>gi|291618558|ref|YP_003521300.1| YfiQ [Pantoea ananatis LMG 20103]
 gi|291153588|gb|ADD78172.1| YfiQ [Pantoea ananatis LMG 20103]
          Length = 895

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 15/144 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A +  + +  P+ +         + +    
Sbjct: 485 LDTHEVQ--PVLKAYGLATLPTWIAKDSEDAVTIAEQIGYPVAL---------KLRSPDV 533

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              ++ +G +    +   V      I+      +QT P  +R+  + V+  A+      L
Sbjct: 534 AHKSEVQGVMLYLRNAAEVKRAADAIIDRV---RQTLPH-ARIEGLVVQSMANRAGAQEL 589

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE 144
            ++V++ +     I   +GG++ +
Sbjct: 590 RIVVEQDALFGPIIMLGEGGVEWQ 613


>gi|262172620|ref|ZP_06040298.1| phosphoribosylamine--glycine ligase [Vibrio mimicus MB-451]
 gi|261893696|gb|EEY39682.1| phosphoribosylamine--glycine ligase [Vibrio mimicus MB-451]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|257870566|ref|ZP_05650219.1| glutathione biosynthesis gshAB [Enterococcus gallinarum EG2]
 gi|257804730|gb|EEV33552.1| glutathione biosynthesis gshAB [Enterococcus gallinarum EG2]
          Length = 751

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA--DS 66
           K +L +    V  G   ++V  A +A        +VVK +    G G   FK+  +  D 
Sbjct: 490 KKILAENGFRVPAGAEFATVEKALAAYPQFADRGFVVKPKTTNYGVGISIFKDGASLEDY 549

Query: 67  KGGVRVESSLKS 78
           +  VR+  +   
Sbjct: 550 QAAVRLAFAEDQ 561


>gi|227831102|ref|YP_002832882.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           islandicus L.S.2.15]
 gi|284998601|ref|YP_003420369.1| ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp
           [Sulfolobus islandicus L.D.8.5]
 gi|227457550|gb|ACP36237.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           L.S.2.15]
 gi|284446497|gb|ADB87999.1| ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp
           [Sulfolobus islandicus L.D.8.5]
 gi|323475420|gb|ADX86026.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           REY15A]
 gi|323478142|gb|ADX83380.1| phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           HVE10/4]
          Length = 397

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 26/163 (15%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P  K     +   A+ A K +  P  + K ++ + G G                + + +
Sbjct: 126 LPTTKYAFAENEEEAKHACKDIGFPCLI-KPEMSSSGHGHV--------------LVNKI 170

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
             V    RE      ++   G +      V VE+   I  EL + L     S   + I  
Sbjct: 171 DDVEEAYRE-----SVSHARGKS----RRVIVEEFVKIDTELTV-LTYRYYSNSGSIITK 220

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLE 178
           T   ++ +  +  Y +      +   +  T+      + + L 
Sbjct: 221 TIEPIEHKRPSYYYVESWHPSTVSREVKETARGIAQKVVEELG 263


>gi|110644340|ref|YP_672070.1| phosphoribosylamine--glycine ligase [Escherichia coli 536]
 gi|191174304|ref|ZP_03035812.1| phosphoribosylamine--glycine ligase [Escherichia coli F11]
 gi|218692286|ref|YP_002400498.1| phosphoribosylamine--glycine ligase [Escherichia coli ED1a]
 gi|300985436|ref|ZP_07177439.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 200-1]
 gi|331660566|ref|ZP_08361499.1| phosphoribosylamine--glycine ligase [Escherichia coli TA206]
 gi|110345932|gb|ABG72169.1| phosphoribosylamine-glycine ligase [Escherichia coli 536]
 gi|190905436|gb|EDV65067.1| phosphoribosylamine--glycine ligase [Escherichia coli F11]
 gi|218429850|emb|CAR10676.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Escherichia coli ED1a]
 gi|300306528|gb|EFJ61048.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 200-1]
 gi|315300748|gb|EFU59973.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 16-3]
 gi|324015259|gb|EGB84478.1| phosphoribosylamine--glycine ligase [Escherichia coli MS 60-1]
 gi|331052349|gb|EGI24387.1| phosphoribosylamine--glycine ligase [Escherichia coli TA206]
          Length = 429

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLAEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|297801062|ref|XP_002868415.1| hypothetical protein ARALYDRAFT_493601 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314251|gb|EFH44674.1| hypothetical protein ARALYDRAFT_493601 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 537

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S   A      +  P+ ++K+    GGRG    KE    
Sbjct: 191 ARETMKNAGVPTVPGSDGLLQSTEEAVRVANEIGFPV-MIKATAGGGGRGMRLAKEPG-- 247

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 248 -----EFVKLLQQAKSEAAAAFGND 267


>gi|154483829|ref|ZP_02026277.1| hypothetical protein EUBVEN_01533 [Eubacterium ventriosum ATCC
           27560]
 gi|149735320|gb|EDM51206.1| hypothetical protein EUBVEN_01533 [Eubacterium ventriosum ATCC
           27560]
          Length = 332

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
               ++  GG P   + +   ++ D    A ++   D  + G+           D++  G
Sbjct: 202 YCKAMEETGGKPR-LVSLDNVSEVDAYEKAIELFGKDKEIDGVF-------ATTDLIAIG 253

Query: 342 ILSAVKEVKINIPLVMRLEG 361
           +L A+KE+KI +P  +++ G
Sbjct: 254 VLKALKELKIKVPSQVKVFG 273


>gi|145600974|ref|YP_001165050.1| phosphoribosylamine--glycine ligase [Yersinia pestis Pestoides F]
 gi|145212670|gb|ABP42077.1| phosphoribosylamine--glycine ligase [Yersinia pestis Pestoides F]
          Length = 428

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V AA + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTQEEAETAVNDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|119470555|ref|ZP_01613258.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein
           [Alteromonadales bacterium TW-7]
 gi|119446256|gb|EAW27533.1| putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding protein
           [Alteromonadales bacterium TW-7]
          Length = 889

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 29/232 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           + A  +L  Y V   +  V  +   A+     L  P+ +         +         ++
Sbjct: 492 HNASQVLSHYGVECIETKVAYTPTEAKEQAIELGFPVAL---------KLISPSIASKSE 542

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGP-TGSRVNCVYVEDGADILRELYLSLLV 124
             G V   +    V      +L     T       G  +    +   A    EL +++  
Sbjct: 543 VGGVVLNLNDANEVEQTAFAMLIRIKNTYPDATIDGFSLQT--MAPRAG-ANELRIAIKT 599

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +   G V  +     G++  + A   P             +    +A+  D   L+ +  
Sbjct: 600 EPNFGPVILLGEAGTGLEYAQAAVALPPLNMN--------LAKYLIAAAHDKGVLKDRIL 651

Query: 185 IDGGD------LFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFD 229
            +  D      L   + +   D+ D+S +E+NP I+  NG+  VLD+ I+ +
Sbjct: 652 PEKVDKYRLCALLTRISQLVVDQPDISAMELNP-ILASNGQFLVLDATITLN 702


>gi|114771221|ref|ZP_01448641.1| putative acyl-coa synthetase protein [alpha proteobacterium
           HTCC2255]
 gi|114548146|gb|EAU51033.1| putative acyl-coa synthetase protein [alpha proteobacterium
           HTCC2255]
          Length = 678

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 67/218 (30%), Gaps = 32/218 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +L ++++ +     +S+    + A   +  P+ V+K      G G     E    + 
Sbjct: 478 AKKMLGEFDIQLPISQTVSNYEDIKDAANNVGFPV-VLK------GEGSAHKTEAGLVAL 530

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA-DILRELYLSLLVDR 126
                  +   +++  + +                     +E    D L EL + +++D 
Sbjct: 531 N----LQNQTDILNAAKVM---------------PSETFLIEKMIADSLIELLVGVVLDE 571

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQARI 185
             G V  IAS  GG   E         I     D L  + T +                 
Sbjct: 572 AHGYVLTIAS--GGKLTEIFDDKISLLIPANNEDILKSLKTLKMWPLFLGYRGAPSPDIN 629

Query: 186 DGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRV 221
                  N+          +  +EINPLI  +   L  
Sbjct: 630 CILKTIQNVQNFVISNHGKISEVEINPLICRELDALVA 667


>gi|54022522|ref|YP_116764.1| phosphoribosylamine--glycine ligase [Nocardia farcinica IFM 10152]
 gi|54014030|dbj|BAD55400.1| putative phosphoribosylglycinamide synthetase [Nocardia farcinica
           IFM 10152]
          Length = 423

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    V  A   V+ S    ++A+     P +VVK    A G+G
Sbjct: 106 AKDVMAAAGVRTAHSEVVDSPAELDAALDRFG-PTWVVKDDGLAAGKG 152


>gi|307824228|ref|ZP_07654454.1| phosphoribosylamine/glycine ligase [Methylobacter tundripaludum
           SV96]
 gi|307734608|gb|EFO05459.1| phosphoribosylamine/glycine ligase [Methylobacter tundripaludum
           SV96]
          Length = 426

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + ++N+P AK    +    A   IK    P+ VVK+   A G+              
Sbjct: 109 KDFMIRHNIPTAKYQSFTDKQQAIDYIKQQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +  I+ + ++L         G  G   N V VE+      E    ++ D   
Sbjct: 154 GVIVAQTEQEAIAAVEDML----SGNVFGEAG---NRVVVEEFLT-GEEASFIVIADGKH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 ALPM 209


>gi|260497942|ref|ZP_05816059.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           3_1_33]
 gi|260196503|gb|EEW94033.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           3_1_33]
          Length = 1061

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 136 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 171


>gi|212224246|ref|YP_002307482.1| acetyl-CoA synthetase I (NDP forming), alpha subunit [Thermococcus
           onnurineus NA1]
 gi|212009203|gb|ACJ16585.1| acetyl-CoA synthetase I (NDP forming), alpha subunit [Thermococcus
           onnurineus NA1]
          Length = 461

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F  + + R L I E  D +   S   E +  NL  +   G IG M   A           
Sbjct: 272 FKQSGVLRALTIGEAFDWARTLSNLPEPEGENLVILTNGGGIGVMATDAAEEEGLHLYDN 331

Query: 288 LYGGAP-ANFL----------DVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRC 335
           L      AN +          D+ G A  +    A +   ++ ++  I +      ++  
Sbjct: 332 LEDLKVFANHMPPFGSYKNPVDLTGMAGAEAYEGAIRDALANPNMHSIAVLYCQTAVLDP 391

Query: 336 DVLVKGILSAVKEVKINIPLVMRL-EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
             L K ++    E     PLV+ +  G        ++ E G+         + A K + A
Sbjct: 392 RDLAKIVIREYNESGRKKPLVVAIVGGIEAKEAIDMLNEEGIPAYPEP---ERAIKALAA 448

Query: 395 V 395
           +
Sbjct: 449 L 449


>gi|220930279|ref|YP_002507188.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           cellulolyticum H10]
 gi|220000607|gb|ACL77208.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           cellulolyticum H10]
          Length = 1070

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL   ++P+ +G    S   A+     +  P+ V  S +  G
Sbjct: 676 KLLETLDIPIPEGNTAFSFQHAKEIANKIGYPVLVRPSYVLGG 718


>gi|121998778|ref|YP_001003565.1| phosphoribosylamine--glycine ligase [Halorhodospira halophila SL1]
 gi|121590183|gb|ABM62763.1| phosphoribosylamine--glycine ligase [Halorhodospira halophila SL1]
          Length = 429

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ VP A       + AA   I+    P+ V+K+   A G+             
Sbjct: 108 AKAFMARHGVPTAAYRTFDDLGAASDYIREHSTPM-VIKADGLASGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++    +     +L      +  G  G+RV    VE+         LS +    
Sbjct: 154 -GVEVAATKDEALLAAERML----SGQAFGDAGARV---VVEECLQGEE---LSFIALVD 202

Query: 128 SGMVAFIASTQG 139
              V  +AS+Q 
Sbjct: 203 GEHVVAMASSQD 214


>gi|238784489|ref|ZP_04628498.1| hypothetical protein yberc0001_13440 [Yersinia bercovieri ATCC
           43970]
 gi|238714658|gb|EEQ06661.1| hypothetical protein yberc0001_13440 [Yersinia bercovieri ATCC
           43970]
          Length = 880

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|326778921|ref|ZP_08238186.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326659254|gb|EGE44100.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 383

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 37/177 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  ++S    A +  + + G   ++K+ +  G  GK            GV 
Sbjct: 110 LLEIGAPCPRHRIVSDPADAAAFAEEVGGFPVILKT-VRGGYDGK------------GVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+  D +REL  +++      + 
Sbjct: 157 VVRSEADAADPFR--------------AGVPV---LAEEKVDFVRELAANIVRSPHGQAV 199

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               + S Q     + V    P+       + L G   +    +   L + G   ++
Sbjct: 200 AYPVVESIQVDGVCDTVIAPAPEL-----DEELAGEAQQLALRIAAELGVVGHLAVE 251


>gi|325285080|ref|YP_004260870.1| carbamoyl-phosphate synthase large subunit [Cellulophaga lytica DSM
           7489]
 gi|324320534|gb|ADY27999.1| carbamoyl-phosphate synthase, large subunit [Cellulophaga lytica
           DSM 7489]
          Length = 950

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 16/83 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K LL + N+P  K  +  +   A +    L  PL V  S +  G               
Sbjct: 688 SKMLL-ENNIPFPKYGIAETADEALTLADELDFPLLVRPSYVLGG--------------- 731

Query: 68  GGVRVESSLKSVISDIREILGST 90
            G+++  + + +   + ++L   
Sbjct: 732 QGMKIVINKQELEEHVVDLLRKI 754


>gi|256027395|ref|ZP_05441229.1| carbamoyl phosphate synthase large subunit [Fusobacterium sp. D11]
 gi|289765359|ref|ZP_06524737.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp. D11]
 gi|289716914|gb|EFD80926.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp. D11]
          Length = 1058

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 168


>gi|237743991|ref|ZP_04574472.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp. 7_1]
 gi|229433022|gb|EEO43234.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp. 7_1]
          Length = 1058

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV   V++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSVIVHTLEEAEKFVKEIGYPVIV 168


>gi|158313092|ref|YP_001505600.1| GCN5-related N-acetyltransferase [Frankia sp. EAN1pec]
 gi|158108497|gb|ABW10694.1| GCN5-related N-acetyltransferase [Frankia sp. EAN1pec]
          Length = 920

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 12/98 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGG---RGKGRFKELPADS 66
            LL  Y + V    VI     A  A   L  P+ V+K+   + G   R     + L    
Sbjct: 679 ELLACYGIEVVPRRVIGGADEAVEAAALLGWPV-VLKA--LSDGYRHRPDLGGQRLDLPD 735

Query: 67  KGGVRVESSLKSVISDIREIL-GSTLITKQTGPTGSRV 103
              VR         S    +  G+ ++ ++  P G  V
Sbjct: 736 PAAVRAAW-----RSLAERLGPGAPIVAQRMVPGGVAV 768


>gi|15896998|ref|NP_341603.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           solfataricus P2]
 gi|13813157|gb|AAK40393.1| Phosphoribosylglycinamide formyltransferase 2 (purT) [Sulfolobus
           solfataricus P2]
          Length = 409

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 26/163 (15%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P  K     +    + A K +  P  + K ++ + G G                + + +
Sbjct: 138 LPTTKYAFAENEEEVKRACKDIGFPCLI-KPEMSSSGHGHV--------------LVNKI 182

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
           ++V    RE +            G     V VE+   I  EL + L     S   + I  
Sbjct: 183 ENVEEAYRESISH--------ARGKS-RRVIVEEFVKIDTELTV-LTYRYHSNSDSIITK 232

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLE 178
           T   ++ +  +  Y +      +   +  T+      + + L 
Sbjct: 233 TIEPIEHKRPSYYYVESWHPSNVSQGVKETARGIAQKVAEELG 275


>gi|224026216|ref|ZP_03644582.1| hypothetical protein BACCOPRO_02972 [Bacteroides coprophilus DSM
           18228]
 gi|224019452|gb|EEF77450.1| hypothetical protein BACCOPRO_02972 [Bacteroides coprophilus DSM
           18228]
          Length = 503

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 24/112 (21%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + SV  A+     +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSVEEAKEICNRIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            ++  V         +T  ++     G   + VY+E   +    +   +L D
Sbjct: 172 HNVDEVEEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGD 216


>gi|222481020|ref|YP_002567257.1| lysine biosynthesis enzyme LysX [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453922|gb|ACM58187.1| lysine biosynthesis enzyme LysX [Halorubrum lacusprofundi ATCC
           49239]
          Length = 294

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + ++P     V  +  AA  +I+    P  V+K  + + GR   +             
Sbjct: 97  LAEADIPTPATEVTFTKEAAMESIEEFGYPC-VLKPVVGSWGRLMAKID----------- 144

Query: 72  VESSLKSVISDIREILGS 89
              +    I + +E LG 
Sbjct: 145 -TRNAAEAILEHKETLGH 161


>gi|134098654|ref|YP_001104315.1| carbamoyl-phosphate synthase large subunit [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291003660|ref|ZP_06561633.1| carbamoyl-phosphate synthase large subunit [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133911277|emb|CAM01390.1| carbamoyl-phosphate synthase large subunit [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 1110

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    +S   A+     +  P+ V  S +  GGRG
Sbjct: 686 DVLAGAGLPAPKYGTATSFEGAKRIADEIGYPVLVRPSYVL-GGRG 730


>gi|297563049|ref|YP_003682023.1| CoA-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296847497|gb|ADH69517.1| CoA-binding domain protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 719

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMR-----CDVLVKGILSA 345
           GA  N +D+ GG       A  ++   D  V  +++  +  I+        V+   +  A
Sbjct: 602 GAAGNPVDITGGEPPSTYEATIRLGLEDERVHALILGYWHTIITPPMVFAKVVADVVAEA 661

Query: 346 VKEVKINIPLVMRLEG-ANVDIGNRLIAESGLNVITAID 383
            +   I+ P+V  L G   V+  +R + + G+       
Sbjct: 662 -RAKGIDKPVVASLSGDTEVEEASRYLFDHGVVAFPYTT 699


>gi|182420520|ref|ZP_02643307.2| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Clostridium perfringens NCTC 8239]
 gi|182380249|gb|EDT77728.1| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Clostridium perfringens NCTC 8239]
          Length = 778

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYDNIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFSGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|168705365|ref|ZP_02737642.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 366

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 27/114 (23%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K   ++  +P      I +     +A+  +  P  V+K++   G  GK            
Sbjct: 102 KQFFQRLGIPTPPFAAIETEADFRAAVAEIGLP-AVLKTR-RFGYDGK------------ 147

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGP-------------TGSRVNCVYVE 109
           G  V  + +   +  +++ G  LI +   P              G  V    +E
Sbjct: 148 GQAVIRTPQDADAAWQKLGGRPLILEGFVPFDRELSLVAVRGRDGQIVTYPLIE 201


>gi|161508100|ref|YP_001578067.1| biotin carboxylase [Lactobacillus helveticus DPC 4571]
 gi|160349089|gb|ABX27763.1| Biotin carboxylase [Lactobacillus helveticus DPC 4571]
          Length = 459

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           A+  ++K  VPV  G   V+ +   AE+  + +  P+ 
Sbjct: 119 AREAMKKAGVPVIPGSQGVVKTASQAETVAEKIGFPVL 156


>gi|14520859|ref|NP_126334.1| hypothetical protein PAB1937 [Pyrococcus abyssi GE5]
 gi|5458076|emb|CAB49565.1| acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain
           [Pyrococcus abyssi GE5]
          Length = 460

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 28/150 (18%)

Query: 268 NIGCMVNGAGLAMATMDIIKLYGGAP----------ANFL----------DVGGGADQDK 307
           N+  + NG G+ +   D  +  G             AN +          D+ G AD   
Sbjct: 303 NVVIITNGGGIGVMATDAAEEEGLKLYDDLEQLKIFANHMPPFGSYKNPVDLTGMADAKS 362

Query: 308 VAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKINIPLVMRL-EGANVD 365
              A +   +   +  I++      ++    L + I+    E     PLV+ +  G    
Sbjct: 363 YEGAIRDALNHPEMHSIIVLYCQTAVLDPRDLAEIIIREYNESGRKKPLVVAIVGGIEAK 422

Query: 366 IGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
                + E+G+            ++ V A+
Sbjct: 423 EAIDTLNENGIPAYPEP------ERAVKAL 446


>gi|325921385|ref|ZP_08183242.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Xanthomonas
           gardneri ATCC 19865]
 gi|325548143|gb|EGD19140.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Xanthomonas
           gardneri ATCC 19865]
          Length = 381

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFREIGIPVPEFAAIDDRAGLDAALVRIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|320158617|ref|YP_004190995.1| protein acetyltransferase [Vibrio vulnificus MO6-24/O]
 gi|319933929|gb|ADV88792.1| protein acetyltransferase [Vibrio vulnificus MO6-24/O]
          Length = 892

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 75/223 (33%), Gaps = 25/223 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ ++  V    + S    A    + +  P+ V         + +       +D +G +
Sbjct: 499 LLKLFHFDVLPTWIASDTSEAVHIAEQIGYPVAV---------KLRSPDIAHKSDVQGVM 549

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
               + + V S    IL  T +   +      ++ + V+  A +    E+ + ++ D+  
Sbjct: 550 LNLRNSQEVASAADAILDRTKLAYPSAN----IHGLLVQGMAKLAGGEEIRVKVITDKVF 605

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARIDG 187
           G V  +   QGG +  E             + PL + +    +        ++ Q   + 
Sbjct: 606 GPVILLG--QGGSEWSEARDATA------ALPPLNMTLARYQIVRAIKEGHIRLQKLPEP 657

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            D+   L K        ++E+  +  +    +       +  D
Sbjct: 658 MDVL-GLAKFLVRISQMVVELPQIKELDIHPVLANGEHFTILD 699


>gi|308048134|ref|YP_003911700.1| phosphoribosylamine--glycine ligase [Ferrimonas balearica DSM 9799]
 gi|307630324|gb|ADN74626.1| phosphoribosylamine--glycine ligase [Ferrimonas balearica DSM 9799]
          Length = 428

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 73/351 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 108 KDFLARHAIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + + ++L         G  G RV    +E+  +   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEAAVEDMLA----GNAFGDAGHRV---VIEEFLE-GEEASFIVMVDGDN 204

Query: 129 GMVAF-------IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            +          +     G +   +    P  +    I     + +E +    D ++ +G
Sbjct: 205 ILPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTQAIHDR--IMAEVIRPTVDGMKAEG 262

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNA-----LYRH 236
                       LY               L+I  +G  +V++    F D       L   
Sbjct: 263 HPYKGF------LY-------------AGLMIDADGTPKVIEYNCRFGDPETQPIMLRMQ 303

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
            D+ EL   + E   +    + +         +G ++   G   +      + G      
Sbjct: 304 SDLVELCLAACEGKLDQHTAEFD-----PRAAVGVVLASGGYPASYEKGFAISGLR---- 354

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVK 347
                 A+ +KV  A       +   G ++N  G ++    L   +  A +
Sbjct: 355 ---TEYAEGEKVFHA-----GTAEQDGAIVNTGGRVLCATALGHTVTEAQQ 397


>gi|46849351|dbj|BAD17885.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Lepidosiren paradoxa]
          Length = 991

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 18/96 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P AK    ++   A + I +      VVK+   A G+             
Sbjct: 94  AKDFMDRHGIPTAKWKAFTNPLEACNFINSASFLALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V ++ +   S +REIL      K  G  G  +
Sbjct: 141 -GVIVAANKEEACSAVREILQ----DKTFGAAGETI 171


>gi|288817680|ref|YP_003432027.1| phosphoribosylamine-glycine ligase [Hydrogenobacter thermophilus
           TK-6]
 gi|288787079|dbj|BAI68826.1| phosphoribosylamine-glycine ligase [Hydrogenobacter thermophilus
           TK-6]
 gi|308751278|gb|ADO44761.1| phosphoribosylamine/glycine ligase [Hydrogenobacter thermophilus
           TK-6]
          Length = 421

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +++Y +P A+  V      A+  +     P  V+K+   AGG+             
Sbjct: 106 AKDFMQRYQIPTAEYQVFDDAVKAKRFVMDFGTP-LVIKADGLAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            G  V    K+ +  I  I    ++  + G  G RV    +E   +     Y+ +L+D  
Sbjct: 152 -GAVVCYDQKTAMEAIDRI----MVRGELGSAGRRV---VIEQFLEGEEASYI-VLLDGD 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 RYIPL 207


>gi|323527387|ref|YP_004229540.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia sp.
           CCGE1001]
 gi|323384389|gb|ADX56480.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia sp.
           CCGE1001]
          Length = 455

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 112/341 (32%), Gaps = 61/341 (17%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +           + +  P+ +  +                 
Sbjct: 119 AKQTMIKTGVPCVPGSEGALPDDPKEVVKIARQIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL-QGQA 183
           D     +        G     + + + + I +    P  G+       L D +      A
Sbjct: 217 DSFKNAIWL------GERDCSMQRRHQKVIEEA---PAPGI----ARRLIDRIGDRCADA 263

Query: 184 RIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALY 234
               G L    ++  + + +   +E+N       P+  +  G  +     +I+  +   +
Sbjct: 264 CKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVTELITGVDIVQEQIRIAAGEKLAF 323

Query: 235 RHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGA 292
           R  DI             I A+     +I   G +    M  G G+ + +      +   
Sbjct: 324 RQRDIVF---KGHAIECRINAEDP-FKFIPSPGRLTSWHMPGGPGIRVDSHAYNGYF--V 377

Query: 293 PANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
           P N+  + G     GA +++     +I  S+  V+GI  NI
Sbjct: 378 PPNYDSMIGKLIAYGATREQAIKRMRIALSEMVVEGIQTNI 418


>gi|260102051|ref|ZP_05752288.1| acetyl-CoA carboxylase [Lactobacillus helveticus DSM 20075]
 gi|260084153|gb|EEW68273.1| acetyl-CoA carboxylase [Lactobacillus helveticus DSM 20075]
          Length = 466

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           A+  ++K  VPV  G   V+ +   AE+  + +  P+ 
Sbjct: 126 AREAMKKAGVPVIPGSQGVVKTASQAETVAEKIGFPVL 163


>gi|302533367|ref|ZP_07285709.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. C]
 gi|302442262|gb|EFL14078.1| carbamoyl-phosphate synthase, large subunit [Streptomyces sp. C]
          Length = 1102

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLADAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|229011800|ref|ZP_04168981.1| Biotin carboxylase [Bacillus mycoides DSM 2048]
 gi|228749431|gb|EEL99275.1| Biotin carboxylase [Bacillus mycoides DSM 2048]
          Length = 445

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 99/331 (29%), Gaps = 53/331 (16%)

Query: 12  LRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ++  +VPV  G+   I +   A    K +  P  ++K+    GG G              
Sbjct: 123 MQAADVPVVPGITTNIETAEEAIEIAKQIGYP-LMLKASAGGGGIGM-----------QL 170

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +  E +L       +    +     +        +  ++E          + LL D    
Sbjct: 171 METEQTLTKAFESNKTRAQNFFGNGEMYLERYIADAHHIE----------IQLLADTHGN 220

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-----VTSEDVASLCDMLELQGQAR 184
            V          + E   +   QK+ +    P +         E        L       
Sbjct: 221 TVYL-------WERECSVQRRNQKVIEEAPSPFLDEDTRKAMGEVAVQAAKALGYTNAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLL-------EINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           ++   D   N Y  F + +  L        EI  L +++   L     K+SF  + + R 
Sbjct: 274 VEFLVDDQKNFY--FLEMNTRLQVEHPVTEEITGLDLVEQQLLIAYGEKLSFTQDDVKRS 331

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E R +  ED +        ++ + L  NI               +       P   
Sbjct: 332 GHAIEAR-IYAEDPKTFFPSPGKITDLTLPTNIRI------DHFLENQVTITPFYDPMIA 384

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILIN 327
             +  G  +++  +  KI   +  V+GI  N
Sbjct: 385 KVIAHGETREEAISKLKIALEELKVEGIKTN 415


>gi|303326188|ref|ZP_07356631.1| phosphoribosylamine--glycine ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864104|gb|EFL87035.1| phosphoribosylamine--glycine ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 431

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ +  VP A+  V S    A++ +  +  P  V+K+   A G+G      +  DS+
Sbjct: 107 AKEIMDRAQVPTARCAVFSDPEIAKNHVVKVGAP-LVIKADGLAAGKG----VVVARDSQ 161

Query: 68  GGVRVESSLKSVISD 82
             ++  S +    + 
Sbjct: 162 EALQAVSDIMEARAF 176


>gi|91070384|gb|ABE11298.1| phosphoribosylglycinamide synthetase [uncultured Prochlorococcus
           marinus clone HF10-88H9]
          Length = 443

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 23/105 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++K N+P A    ++S+  A+  I +   P  VVK+   A G+             
Sbjct: 122 AKEFMQKANIPTANFWKVNSLEEAKKIINSSSIP-LVVKADGLASGK------------- 167

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV + +S+         I                 N V +E+  
Sbjct: 168 -GVFIPNSVDECFKAAESIFNGKFGNSG--------NVVVLEEKI 203


>gi|172057952|ref|YP_001814412.1| carbamoyl-phosphate synthase, large subunit [Exiguobacterium
           sibiricum 255-15]
 gi|226700928|sp|B1YIR9|CARB_EXIS2 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|171990473|gb|ACB61395.1| carbamoyl-phosphate synthase, large subunit [Exiguobacterium
           sibiricum 255-15]
          Length = 1070

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 37/195 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
           ++P   G    +V  A +A   L  P+ V  S +  G   +  + E   +      V +S
Sbjct: 678 DIPQPPGKTAVTVTEATAAASELGYPVLVRPSYVLGGRAMEIVYGEQELEHYMKHAVIAS 737

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            +  +   R + G  L                + DG D++      ++       +    
Sbjct: 738 PERPVLVDRYLTGMELEVDA------------ICDGTDVVIP---GIMEHIERAGI---- 778

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLY 195
              G        +  PQ I +L++D            +     ++G   I          
Sbjct: 779 -HSGDSIGVYPPQRVPQAIKELIVDYTT--------RIAKAFRIKGLLNIQF-------- 821

Query: 196 KAFCDKDMSLLEINP 210
             F D ++ +LE+NP
Sbjct: 822 -VFADGELYVLEVNP 835


>gi|309366175|emb|CAP22109.2| CBR-PYR-1 protein [Caenorhabditis briggsae AF16]
          Length = 2090

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 32/129 (24%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +        VA     +++  A  A + L  P+ V  +    G            
Sbjct: 457 RDLFNQEISAVGEKVAPSKAATTMEGAIEAAEELGYPVLVRAAYALGGL----------- 505

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G     + + +I+  ++ L  +             N V V+      +E+   ++ 
Sbjct: 506 ----GSGFADNREELIAIAQQALAHS-------------NQVLVDKSLKGWKEVEYEVVR 548

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 549 DAYDNCITV 557


>gi|258624507|ref|ZP_05719451.1| phosphoribosylamine--glycine ligase [Vibrio mimicus VM603]
 gi|258583204|gb|EEW08009.1| phosphoribosylamine--glycine ligase [Vibrio mimicus VM603]
          Length = 429

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|256380884|ref|YP_003104544.1| phosphoribosylamine/glycine ligase [Actinosynnema mirum DSM 43827]
 gi|255925187|gb|ACU40698.1| phosphoribosylamine/glycine ligase [Actinosynnema mirum DSM 43827]
          Length = 419

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A   V+ +    ++A+     P +VVK    A G+G
Sbjct: 106 AKDVMAAAGVPTATSEVVDNPARLDAALTRFG-PRWVVKDDGLAAGKG 152


>gi|238787889|ref|ZP_04631685.1| hypothetical protein yfred0001_13750 [Yersinia frederiksenii ATCC
           33641]
 gi|238723837|gb|EEQ15481.1| hypothetical protein yfred0001_13750 [Yersinia frederiksenii ATCC
           33641]
          Length = 885

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 486 LDTHEVQ--PILEAYGLRMLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 534

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 535 PHKSEVQGVMLYLRTALEVQRAADDILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 590

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 591 RIAVEQDAIFGPLIMLG--EGGVEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 645

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  ++S L+I+P++   +
Sbjct: 646 SRGSLQPLDIPGLSHLLVQVSNLILDCPEISRLDIHPVLASGS 688


>gi|218438952|ref|YP_002377281.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 7424]
 gi|218171680|gb|ACK70413.1| phosphoribosylamine/glycine ligase [Cyanothece sp. PCC 7424]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 17/110 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKAL+ +  V  A G   +    A++ I     P+ VVK+   A G+             
Sbjct: 108 AKALMIEAGVSTAMGETFTEPEGAKAYIHQSGVPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV V  +L+  +  +  +   G T I  +    G  V+ + + DG    
Sbjct: 154 -GVIVAQTLEEALKAVDTLFEEGFTKIVVEDFLVGEEVSVLTLTDGITFR 202


>gi|152980554|ref|YP_001354703.1| D-alanine--D-alanine ligase [Janthinobacterium sp. Marseille]
 gi|167012327|sp|A6T2F6|DDL_JANMA RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|151280631|gb|ABR89041.1| D-alanine-D-alanine ligase [Janthinobacterium sp. Marseille]
          Length = 320

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 67/227 (29%), Gaps = 45/227 (19%)

Query: 9   KALLRKYNVPVAKGVV----ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           K +   + VP  K        ++    ++       P  ++K+  H G        E   
Sbjct: 104 KRVCLSHGVPTPKFTALEVEATTAEQLQAIAAEFGMP-LMLKA-PHEGSTIGIAKVETAE 161

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             + G  + +    V                          V VE      REL + +L 
Sbjct: 162 GMQAGFDLCAKYDDV--------------------------VLVEQFVK-GRELTVPVLG 194

Query: 125 DRTSGM---VAFIASTQGGMDIE-EVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL 179
              +     +  I + QG  D E +   D  Q +     D            S  + +  
Sbjct: 195 SGRNARALPIVEIIAPQGNYDYEHKYFSDDTQYLCPAPFDAAFTKRVQALAVSAFNAVGC 254

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKI 226
            G AR+D   L         D +  LLEIN    M    L  + +K+
Sbjct: 255 TGWARVDF--LVRE-----SDNEPFLLEINTSPGMTGHSLVPMSAKV 294


>gi|83648652|ref|YP_437087.1| phosphoribosylamine--glycine ligase [Hahella chejuensis KCTC 2396]
 gi|83636695|gb|ABC32662.1| Phosphoribosylamine-glycine ligase [Hahella chejuensis KCTC 2396]
          Length = 432

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYQSFTEIEPALAYLREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L       + G  G RV    +E+  +   E    ++VD   
Sbjct: 154 GVIVAMTLGEAEDAVRDMLA----DAKFGDAGHRV---VIEEFLE-GEEASFIVMVDGKH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 MLPM 209


>gi|15894818|ref|NP_348167.1| hypothetical protein CA_C1540 [Clostridium acetobutylicum ATCC 824]
 gi|15024490|gb|AAK79507.1|AE007664_4 Uncharacterized ATP-grasp enzyme [Clostridium acetobutylicum ATCC
           824]
 gi|325508956|gb|ADZ20592.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 328

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 6/116 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA--DS 66
           K +L++  + V +GV +     A+       G   VVK +    G+G    K+L +  D 
Sbjct: 71  KIVLKENGINVPEGVTLKEASEAKEKFSLFYGKDTVVKPKSTNFGKGVIILKQLRSIEDF 130

Query: 67  KGGVRVESSLKSVISDIREILGST----LITKQTGPTGSRVNCVYVEDGADILREL 118
           +  V       + +     I G      +I  +T     RV    + DG   ++EL
Sbjct: 131 ENAVNQAFEYDNSVMVEEFIAGKEYRFLVIGDETIAVLHRVPANVIGDGVHSIKEL 186


>gi|163940315|ref|YP_001645199.1| acetyl-CoA carboxylase biotin carboxylase subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163862512|gb|ABY43571.1| Carbamoyl-phosphate synthase L chain ATP-binding [Bacillus
           weihenstephanensis KBAB4]
          Length = 445

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 99/331 (29%), Gaps = 53/331 (16%)

Query: 12  LRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ++  +VPV  G+   I +   A    K +  P  ++K+    GG G              
Sbjct: 123 MQAADVPVVPGITTNIETAEEAIEIAKQIGYP-LMLKASAGGGGIGM-----------QL 170

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +  E +L       +    +     +        +  ++E          + LL D    
Sbjct: 171 METEQTLTKAFESNKTRAQNFFGNGEMYLERYIADAHHIE----------IQLLADTHGN 220

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-----VTSEDVASLCDMLELQGQAR 184
            V          + E   +   QK+ +    P +         E        L       
Sbjct: 221 TVYL-------WERECSVQRRNQKVIEEAPSPFLDEGTRKAMGEVAVQAAKALGYTNAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLL-------EINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           ++   D   N Y  F + +  L        EI  L +++   L     K+SF  + + R 
Sbjct: 274 VEFLVDDQKNFY--FLEMNTRLQVEHPVTEEITGLDLVEQQLLIAYGEKLSFTQDDVKRS 331

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E R +  ED +        ++ + L  NI               +       P   
Sbjct: 332 GHAIEAR-IYAEDPKTFFPSPGKITDLTLPTNIRI------DHFLENQVTITPFYDPMIA 384

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILIN 327
             +  G  +++  +  KI   +  V+GI  N
Sbjct: 385 KVIAHGETREEAISKLKIALEELKVEGIKTN 415


>gi|312130410|ref|YP_003997750.1| acetyl-CoA carboxylase, biotin carboxylase [Leadbetterella
           byssophila DSM 17132]
 gi|311906956|gb|ADQ17397.1| acetyl-CoA carboxylase, biotin carboxylase [Leadbetterella
           byssophila DSM 17132]
          Length = 447

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AK  ++K  VPV  G   ++SSV   ++  + +  P+ ++K+
Sbjct: 119 AKETMKKAGVPVIPGSDGLLSSVEEGKALAEEIGYPV-IIKA 159


>gi|296394696|ref|YP_003659580.1| carbamoyl-phosphate synthase large subunit [Segniliparus rotundus
           DSM 44985]
 gi|296181843|gb|ADG98749.1| carbamoyl-phosphate synthase, large subunit [Segniliparus rotundus
           DSM 44985]
          Length = 1119

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ALL    +   K  V +SV  A++    +  P+ V  S +  GGRG
Sbjct: 685 ALLGDLGLTAPKFGVATSVDGAKAVADQIGYPVLVRPSFVL-GGRG 729


>gi|296273014|ref|YP_003655645.1| carbamoyl-phosphate synthase large subunit [Arcobacter nitrofigilis
           DSM 7299]
 gi|296097188|gb|ADG93138.1| carbamoyl-phosphate synthase, large subunit [Arcobacter
           nitrofigilis DSM 7299]
          Length = 1079

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 5/104 (4%)

Query: 11  LLRKYNVPV----AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           L  +  + +     K     SV  A    K +  P+    S   AGG     +       
Sbjct: 129 LFNEAMIKIGMDLPKSANAYSVEEAIKVAKEIGFPVISRASFTLAGGGSGVAYNMEEFKK 188

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
              + +E+S  + I  +  +LG      +      + NC+ V  
Sbjct: 189 LAEIGIEASPINEIEIMESMLGWKEYEMEVI-RDRKDNCIIVCS 231


>gi|145592591|ref|YP_001156888.1| carbamoyl-phosphate synthase L chain, ATP-binding [Salinispora
           tropica CNB-440]
 gi|145301928|gb|ABP52510.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Salinispora
           tropica CNB-440]
          Length = 445

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 10/83 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L+    VPVA G     + + AA  A   +  P+ V          G G      A+
Sbjct: 119 ARNLMAAAGVPVAPGTTEPAADLTAAVEAASEIGYPVMVK------AAAGGGGMGMGIAN 172

Query: 66  SKGGVRVESSLKSVISDIREILG 88
            +  +R E     V +    + G
Sbjct: 173 DEAALRTEYDK--VRAFAERMFG 193


>gi|152989370|ref|YP_001350896.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa PA7]
 gi|150964528|gb|ABR86553.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa PA7]
          Length = 429

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHRIPTAAYRNFTEVEPALAYLREQGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  SL    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMSLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|330998095|ref|ZP_08321923.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Paraprevotella
           xylaniphila YIT 11841]
 gi|329569184|gb|EGG50975.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Paraprevotella
           xylaniphila YIT 11841]
          Length = 503

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 64/205 (31%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +    VPV  G    +     A    K +  P+ ++K+ +  GG+           
Sbjct: 119 ARQRMMAAGVPVVPGTAEPLKDADEAVRICKEIGFPV-MLKASMGGGGK----------- 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   V          ++ +          + VY+E   +    +   +L D
Sbjct: 167 ---GMRLIHSEDEVKEAYDSARSESMSSFGD-------DTVYLEKFVEEPHHIEFQILGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
               +V          D E   +   QKI +    P   +T E    + +      +A  
Sbjct: 217 AHGNVV-------HLFDRECSVQRRNQKIVEESPSPF--LTPELRREMGEKAVAAARAVN 267

Query: 186 -DGGDLFPNLYKAFCDKDMSLLEIN 209
             G      L   +       LE+N
Sbjct: 268 YRGAGTIEFLVDKYR--HFYFLEMN 290


>gi|325469980|gb|ADZ16269.1| pyruvate carboxylase [uncultured bacterium]
          Length = 156

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +++   VPV  G    + S   A+     +  P+ ++K+    GG G     + P  
Sbjct: 36  SKQMMKAAGVPVVPGTDGGVKSYDGAKKVAAEIGYPV-IIKASAGGGGIGMQIVNDEPGL 94

Query: 66  SKGGVRVESSLKSVISDIREILGSTLI 92
            +         +S   D   ++   L+
Sbjct: 95  QEAIAAAMRIAESAFGDATILIEKYLV 121


>gi|288870534|ref|ZP_06114452.2| ATP-grasp domain protein [Clostridium hathewayi DSM 13479]
 gi|288866809|gb|EFC99107.1| ATP-grasp domain protein [Clostridium hathewayi DSM 13479]
          Length = 434

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 14/150 (9%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           K L+R+      +   K ++  +    E A + +  P  V+K    A       F +L  
Sbjct: 126 KHLMRQAVDRAGLSNPKYMLAYNWEEVEKAAQEIGYP-LVLKPVDLA----SSAFVKLIQ 180

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S    +    L++   + R+         +    G  V+   V +  +I     + +  
Sbjct: 181 TSNDLQQAYRDLENFPLNFRDQERERAFLIEEYICGEEVSVETVSNNGEITV---VGITD 237

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKI 154
              +G   FI    G M   ++ +D  ++I
Sbjct: 238 KSVTGSPYFI--ENGHMFPAKLDEDVKEEI 265


>gi|154493411|ref|ZP_02032731.1| hypothetical protein PARMER_02749 [Parabacteroides merdae ATCC
           43184]
 gi|154086621|gb|EDN85666.1| hypothetical protein PARMER_02749 [Parabacteroides merdae ATCC
           43184]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++N+P A  K +   ++    + ++ L  P YV+K+   A G+           
Sbjct: 110 AKAFMMRHNIPTARYKSISAGNLEEGYAFLEELQAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ ++LG           G     V +E+  D
Sbjct: 158 ---GVLILDTLEEAKKELDDMLGGMF--------GDASKTVVIEEFLD 194


>gi|121607820|ref|YP_995627.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121552460|gb|ABM56609.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 766

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 20/220 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL +  +PV +  V        +A+++L  P+ V+K    A                G 
Sbjct: 550 ALLAQAGLPVVRHRVCRRQEDIAAALESLQRPV-VLKGVSAA---------ITHKSEHGL 599

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           VR+  S             + L        G     + V + A    EL +    D T G
Sbjct: 600 VRLGVSAPEQAHAAWRDYQTVLDGLGADFGG-----LLVAEQARGDFELAVGAHWDATFG 654

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQARIDGG 188
            V  +    GG+ +E                 L  +              L         
Sbjct: 655 PVVMVG--HGGVLVEAYQDMQFLLAPFTRAQALAAIARLRVARGFAATRGLPAVDLHALA 712

Query: 189 DLFPNLYKAFCDKD--MSLLEINPLIIMKNGRLRVLDSKI 226
            +   L + F  +    S ++ NP+++ +     ++D+ +
Sbjct: 713 AMLVTLGQWFVQQQGAFSSIDANPVLVSRTAAPVLVDAVV 752


>gi|46911581|emb|CAG27611.1| phosphoribosylaminoimidazole carboxylase [Mucor circinelloides]
          Length = 555

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 24/78 (30%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y  K  L  + +PVA+   I    A +   K    PL +    +   G+G    K     
Sbjct: 107 YNQKKYLESHGIPVAEYREIKDADAVKQVAKEFGYPLMLKSKTMAYDGKGNYVVKSEADV 166

Query: 66  SKGGVRVESSLKSVISDI 83
            K    +  +        
Sbjct: 167 EKAVAALSKTPLYAEKWA 184


>gi|162418161|ref|YP_001605069.1| phosphoribosylamine--glycine ligase [Yersinia pestis Angola]
 gi|162350976|gb|ABX84924.1| phosphoribosylamine--glycine ligase [Yersinia pestis Angola]
          Length = 428

 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V AA + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  + +   + + ++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTQEEAETAVNDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGGN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|315038738|ref|YP_004032306.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           amylovorus GRL 1112]
 gi|325957174|ref|YP_004292586.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           acidophilus 30SC]
 gi|312276871|gb|ADQ59511.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           amylovorus GRL 1112]
 gi|325333739|gb|ADZ07647.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           acidophilus 30SC]
          Length = 1062

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCKKLGEPVPPSKTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    + + +    +  L  + +T+     
Sbjct: 180 GI--CHNREELAEIAKNGLELSPVTECLIEK 208


>gi|255036670|ref|YP_003087291.1| succinyl-CoA synthetase, alpha subunit [Dyadobacter fermentans DSM
           18053]
 gi|254949426|gb|ACT94126.1| succinyl-CoA synthetase, alpha subunit [Dyadobacter fermentans DSM
           18053]
          Length = 292

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYG-GAPANFLDVGGGADQDKVAAAFKIITSDSS 320
           +I   G IG +     L    +D +   G G        G          A +++ +D  
Sbjct: 141 FIFKKGTIGLVSKSGTLTYEAVDQLSRAGLGQTTAIGIGGDPIIGTTTKEAVELLMNDDE 200

Query: 321 VKGIL-INIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVI 379
            + I+ I   GG M  D         +K      P+V  + G     G R+   +G  + 
Sbjct: 201 TEAIVMIGEIGGSMEADAAA-----YIKSTGNKKPVVGFIAGQTAPKGRRM-GHAGAIIG 254

Query: 380 TAIDLDDAAQKIVH 393
            A D  +A  +I+ 
Sbjct: 255 GADDTAEAKIRIMK 268


>gi|85058120|ref|YP_453822.1| phosphoribosylglycineamide synthase [Sodalis glossinidius str.
           'morsitans']
 gi|84778640|dbj|BAE73417.1| phosphoribosylglycineamide synthase [Sodalis glossinidius str.
           'morsitans']
          Length = 427

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++ +P A+    + V  A   ++    P+ V+K+   A G+             
Sbjct: 108 SKDFLARHGIPTARYENFTEVAPALDYVRQQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +     S + ++L         G  G     + +E+  D   E    ++VD  
Sbjct: 154 -GVIVAMTQVEAESAVNDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGE 204

Query: 128 SGMVA 132
             +  
Sbjct: 205 HVLPM 209


>gi|326634052|pdb|2XCL|A Chain A, Nucleotide-Bound Structures Of Bacillus Subtilis
           Glycinamide Ribonucleotide Synthetase
          Length = 422

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L +KY++P A+    +S   A++ ++    P+ V+K+   A G+             
Sbjct: 106 AKDLXKKYDIPTAEYETFTSFDEAKAYVQEKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  I+ + + L       +    G     V +E+      E  L   V   
Sbjct: 152 -GVTVAXTEEEAIACLHDFL-------EDEKFGDASASVVIEEYLS-GEEFSLXAFVKGE 202

Query: 128 SGMVAFIA 135
                 IA
Sbjct: 203 KVYPXVIA 210


>gi|312870006|ref|ZP_07730145.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus oris
           PB013-T2-3]
 gi|311094591|gb|EFQ52896.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus oris
           PB013-T2-3]
          Length = 1060

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 15/36 (41%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   PV     + +V  A      +  P+ V
Sbjct: 133 KELMQRLGEPVPASQTVETVDEALVFAHQIGYPVIV 168


>gi|296421966|ref|XP_002840534.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636752|emb|CAZ84725.1| unnamed protein product [Tuber melanosporum]
          Length = 411

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 49/106 (46%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  +R++N+P A+    +    A++ ++ +   + V+K+   A G+             
Sbjct: 109 SKDFMRRHNIPTAEYRNFAVYEEAKAYLEKVGHSV-VIKASGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + +S +  ++ ++EI    ++ K+ G  G  V    +E+  +
Sbjct: 155 -GVVIPASKREALAALKEI----IVDKEFGAAGDEV---VIEEFLE 192


>gi|218258735|ref|ZP_03475040.1| hypothetical protein PRABACTJOHN_00696 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225238|gb|EEC97888.1| hypothetical protein PRABACTJOHN_00696 [Parabacteroides johnsonii
           DSM 18315]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++N+P A  K +   ++    + ++ L  P YV+K+   A G+           
Sbjct: 110 AKAFMMRHNIPTARYKSISAGNLEEGYAFLEELQAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ ++LG           G     V +E+  D
Sbjct: 158 ---GVLILDTLEEAKKELGDMLGGMF--------GDASKTVVIEEFLD 194


>gi|222479135|ref|YP_002565372.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222452037|gb|ACM56302.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 387

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA-GGRGKGRFKEL--PAD 65
           K  L    +PV + V +++    E  ++   G   ++K++     GRG     E    AD
Sbjct: 112 KEALVDAGIPVPEFVAVATAEGLERVVEEYGG--VMLKAREGGYDGRGNVPVDEPADAAD 169

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
           +   +   +  +  +   REI    L           V         +ILRE
Sbjct: 170 ALDEIGGAAMAEEFLDFEREIAVMGLKGADGETRTYPVTETI--HREEILRE 219


>gi|149178523|ref|ZP_01857111.1| phosphoribosylamine-glycine ligase [Planctomyces maris DSM 8797]
 gi|148842638|gb|EDL57013.1| phosphoribosylamine-glycine ligase [Planctomyces maris DSM 8797]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ K NVP AK    ++  AAE+ ++       V+K+   A G+             
Sbjct: 106 AKQMMWKANVPTAKSETFNNFEAAEAYLEEREEQPLVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +  +  I+ +    +  ++ G  G  V    +E+   I +E  +S+L   +
Sbjct: 153 -GVLICDTKQEALDAIKSL----MKIREFGDAGKTV---IIEEKL-IGQE--VSILAIVS 201

Query: 128 SGMVAFIASTQG 139
              +  + ++Q 
Sbjct: 202 GSTIVPLETSQD 213


>gi|71082750|ref|YP_265469.1| carbamoyl-phosphate synthase large chain [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71061863|gb|AAZ20866.1| Carbamoyl-phosphate synthase large chain [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 1074

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 14/214 (6%)

Query: 9   KALLRKYNVPV--AKGVVISSVHAAESAIKT-LPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K +L+KY + +  A    IS+    +   K  L   L + KS++ +  R   +  +    
Sbjct: 105 KGILKKYKIELIGANSKAISNAEDRKKFRKNMLDIGLDLPKSKVVSHIRDAAKALK-QIG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               +R   +L  +   I +     L   + G   S VN + +E+  +  +E  + ++ D
Sbjct: 164 LPAIIRPAFTLGGLGGGIAKTEKEYLKIVKDGLHESPVNQILIEECLEGWKEFEMEVVRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQA 183
           +    +           IE +          + + P + +T     V     +  L+   
Sbjct: 224 KKDNCIII-------CSIENIDPMGIHTGDSITVAPALTLTDKEYQVMRNASIACLRKIG 276

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              GG           D  M ++E+NP +   + 
Sbjct: 277 VETGGSNVQFAINP-KDGRMVIIEMNPRVSRSSA 309


>gi|332295571|ref|YP_004437494.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfobium
           narugense DSM 14796]
 gi|332178674|gb|AEE14363.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfobium
           narugense DSM 14796]
          Length = 1076

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 29/152 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  +++  V + K  +  S++ AE     L  PL +         R              
Sbjct: 133 RETMKEIGVDLPKSGIAHSLNEAEKIAFELGFPLII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +   +   +   L  ++           ++ V +E+     +E  L ++ D+  
Sbjct: 181 ---IAYNFDDLRYHVSNGLDLSM-----------IHQVLIEESVLNWKEFELEVMRDKK- 225

Query: 129 GMVAFIASTQ--GGMDIEEVAKDYPQKIFKLL 158
             V  I S +    M I          I  L 
Sbjct: 226 DNVVIICSIENFDPMGIHTGDSITVAPIQTLT 257


>gi|296188907|ref|XP_002742550.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           isoform 1 [Callithrix jacchus]
          Length = 728

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAKVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALAKAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            I+   D   N Y  F + +  L   +P+     G
Sbjct: 334 TIEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|242238334|ref|YP_002986515.1| GCN5-related N-acetyltransferase [Dickeya dadantii Ech703]
 gi|242130391|gb|ACS84693.1| GCN5-related N-acetyltransferase [Dickeya dadantii Ech703]
          Length = 887

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 79/250 (31%), Gaps = 19/250 (7%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++IHE  A  +L  Y +      +      A      +  P+ +         + +    
Sbjct: 482 LDIHE--AAPILNAYGLHTQPTRIAEDSIQAARIAGEIGYPVAI---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELY 119
              +D +G +    +   V      IL     T  Q    G  V  +      +   EL 
Sbjct: 531 PHKSDVQGVLLYLQTADEVQLSAEAILKRVRQTHPQARMQGLLVQGM---ANRNGALELR 587

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
           + +  D   G +  +         E  A+     +   L   LI V +     +     +
Sbjct: 588 IVVKQDPVFGPIIMLGEGSAEWRDETQAEVALPPLNMTLASYLI-VQALKSGKIRSHGSI 646

Query: 180 QGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLD 238
                     L   +     D  +MS L+I+PL+   +  L +LD+ +  +      H  
Sbjct: 647 VPLDVAALSRLLVQVSNLIIDCPEMSRLDIHPLLACGD-TLTLLDATLHLEPFVQDPHSR 705

Query: 239 IQELRDVSEE 248
           +  +R   +E
Sbjct: 706 L-SIRPYPQE 714


>gi|303322633|ref|XP_003071308.1| Carbamoyl-phosphate synthase L chain, ATP binding domain containing
           protein [Coccidioides posadasii C735 delta SOWgp]
 gi|240111010|gb|EER29163.1| Carbamoyl-phosphate synthase L chain, ATP binding domain containing
           protein [Coccidioides posadasii C735 delta SOWgp]
          Length = 606

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 13/168 (7%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--- 61
           QAK L     VPV K +    S ++  ++    +  P+ ++K+    GGRG    +    
Sbjct: 59  QAKELAEACGVPVLKAITQPTSDLNVIKAFAAEVGYPV-MIKAVDGGGGRGIRLVRSEDT 117

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR----- 116
           L A     +    S K  +     + G   +  Q    G+       E    I R     
Sbjct: 118 LQASVDRAMGESPSKKVFVEKAA-VEGYHHVEVQVIGDGTGQVRHLWERDCSIQRRFQKI 176

Query: 117 -ELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI 163
            E   +L+ DR    +   A+ +    I+ ++    + +    +    
Sbjct: 177 VECAPALMKDRKLICLVIEAALRIANRIKYLSLGTFEFLVNEQVSEFY 224


>gi|241760620|ref|ZP_04758712.1| phosphoribosylamine--glycine ligase [Neisseria flavescens SK114]
 gi|241318801|gb|EER55327.1| phosphoribosylamine--glycine ligase [Neisseria flavescens SK114]
          Length = 423

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KY +P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYKIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 182


>gi|254571783|ref|XP_002493001.1| Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic
           pathway [Pichia pastoris GS115]
 gi|238032799|emb|CAY70822.1| Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic
           pathway [Pichia pastoris GS115]
 gi|328352987|emb|CCA39385.1| phosphoribosylamine--glycine ligase /
           phosphoribosylformylglycinamidine cyclo-ligase [Pichia
           pastoris CBS 7435]
          Length = 786

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 27/127 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+ +P AK    ++   A+  I        V+K+                  + 
Sbjct: 111 SKDFMTKHGIPTAKFANFTNYDDAKRYIDE-NDHRLVIKA--------------SGIAAG 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + ++ +   + I+EI    ++ +  G  G  V    +E+  D      LS+L    
Sbjct: 156 KGVLIPTNKEEAYAAIKEI----MVDRNFGDAGDEV---VIEEFLDGDE---LSILC--I 203

Query: 128 SGMVAFI 134
           S   +FI
Sbjct: 204 SDGYSFI 210


>gi|227515719|ref|ZP_03945768.1| glutamine-hydrolyzing carbamoyl-phosphate synthase [Lactobacillus
           fermentum ATCC 14931]
 gi|227085919|gb|EEI21231.1| glutamine-hydrolyzing carbamoyl-phosphate synthase [Lactobacillus
           fermentum ATCC 14931]
          Length = 1059

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+++   PV   + +S+V  A +  KT+  P+ V  +    G  G     E       
Sbjct: 133 KELMQELGEPVPASLTVSTVEQALAFAKTVGYPVIVRPAFTMGGTGGGLANNEAELTEIA 192

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTG 97
              +E S  +     + I G   I  +  
Sbjct: 193 KNGLELSPATQCLIEKSIAGYKEIEFEVM 221


>gi|255281292|ref|ZP_05345847.1| carbamoyl-phosphate synthase, large subunit [Bryantella
           formatexigens DSM 14469]
 gi|255268249|gb|EET61454.1| carbamoyl-phosphate synthase, large subunit [Bryantella
           formatexigens DSM 14469]
          Length = 1075

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           Q + ++ K  +P+ +  +  +V  A S  K +  P+ V  S +  GGRG
Sbjct: 670 QFREMMEKLEIPMPESGMAVNVEEALSIAKQIGYPVMVRPSYVL-GGRG 717



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + +A+  V  SV  A +    L  P+                 +        
Sbjct: 133 KKAMNALGIEMARSEVAYSVEEALAIADNLGYPVV---------------LRPAYTMGGA 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  + + + +     L ++L           V  V VE+      EL L ++ D  +
Sbjct: 178 GGGLVYNREELKTVCARGLQASL-----------VGQVLVEESIIGWEELELEVVRDADN 226

Query: 129 GMVAF 133
            M+  
Sbjct: 227 NMITV 231


>gi|188580296|ref|YP_001923741.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium populi
           BJ001]
 gi|179343794|gb|ACB79206.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium populi
           BJ001]
          Length = 455

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 7   QAKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +P V   +G V S    A+     +  P+ V K+    GGRG        
Sbjct: 118 EAKRTAKRLGIPCVPGSEGGV-SDPDEAKRVAAEIGYPVLV-KAASGGGGRGM------- 168

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTG 97
             ++    +E +L    ++ +   G   +  +  
Sbjct: 169 KVARSEAELEQALDMARTEAKAAFGDDAVYLEKY 202


>gi|229581352|ref|YP_002839751.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           islandicus Y.N.15.51]
 gi|228012068|gb|ACP47829.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           Y.N.15.51]
          Length = 397

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 26/163 (15%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P  K     +   A+ A K +  P  + K ++ + G G                + + +
Sbjct: 126 LPTTKYAFAENEEEAKHACKDIGFPCLI-KPEMSSSGHGHV--------------LVNKI 170

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
             V    RE              G RV    VE+   I  EL + L     S   + I  
Sbjct: 171 DDVEEAYRE------SVSHARGKGRRV---IVEEFVKIDTELTV-LTYRYYSNSGSIITK 220

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLE 178
           T   ++ +  +  Y +      +   +  T+      + + L 
Sbjct: 221 TIEPIEHKRPSYYYVESWHPSTVSREVKETARGIAQKVVEELG 263


>gi|308274052|emb|CBX30651.1| hypothetical protein N47_E41630 [uncultured Desulfobacterium sp.]
          Length = 469

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 28/172 (16%)

Query: 248 EDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG----------------- 290
           E      A    L  +     +G + N  G A+   D++   G                 
Sbjct: 286 EGELCRAAAAFALQPVPRGNRVGIITNTGGPAIIATDVLISSGIDMPQLSEKARESLKIK 345

Query: 291 ----GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINI---FGGIMRCDVLVKGIL 343
                   N +DV      +   AA + + ++  +  + IN    F   +    + K I 
Sbjct: 346 LYPEACVNNPIDVLATGKSEHFRAAIETMMNEDKIDSLFINFVTPF--FVDTVSIAKEIA 403

Query: 344 SAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
            A ++ K  I   +  +         ++ + G+   +     DA++ +   V
Sbjct: 404 DAGRQKKKPIICNLMTDKNRWTETISILKDGGIPCYSFPS--DASKALASLV 453


>gi|291279663|ref|YP_003496498.1| pyruvate carboxylase [Deferribacter desulfuricans SSM1]
 gi|290754365|dbj|BAI80742.1| pyruvate carboxylase [Deferribacter desulfuricans SSM1]
          Length = 1144

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 35/210 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           AK L ++  VPV +G  +I+S+  A+S  K++  P  ++K+         G         
Sbjct: 121 AKDLAKECGVPVIEGSDIINSLEEAKSLAKSIGYP-LMIKA-------TAGGGGRGIRIV 172

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +  +  S  S+  +   +  +  +           Y+E    I     + LL D+
Sbjct: 173 HNEKELAENFDSAKSEAFKAFANDDVILEK----------YIEKPKHIE----VQLLADK 218

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQARI 185
                  +   +    I+   +   +      I   +     + A  +     L   A +
Sbjct: 219 YGN---IVHLYERDCSIQRRHQKLIEIAPAFTIPEKVLNQMYEAAIEIGKKSHLVSAATV 275

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           +             + +   LE+NP I ++
Sbjct: 276 EFL--------VDKNNNFYFLEVNPRIQVE 297


>gi|256825106|ref|YP_003149066.1| carbamoyl-phosphate synthase large subunit [Kytococcus sedentarius
           DSM 20547]
 gi|256688499|gb|ACV06301.1| carbamoyl-phosphate synthase large subunit [Kytococcus sedentarius
           DSM 20547]
          Length = 1118

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +   +     S   A +  + +  P+ V  S +  GGRG
Sbjct: 685 RVLAEAGLVAPRFGTAFSADEAVAISQDIGYPVLVRPSYVL-GGRG 729


>gi|121594399|ref|YP_986295.1| carbamoyl-phosphate synthase L chain, ATP-binding [Acidovorax sp.
           JS42]
 gi|120606479|gb|ABM42219.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Acidovorax sp. JS42]
          Length = 682

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G    I+   AA    K +  P+ +  S                  
Sbjct: 119 SKKLANQAGVNTIPGYNDPIAGPEAAVEIAKGIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K               +          + +++E      R + + +L D
Sbjct: 164 GGKGLRVAFNDKEAFEGFASCQNEARNSFGD-------DRIFIEKFVQEPRHIEIQVLGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     I D       E   +L   +  Q    
Sbjct: 217 AHGN---VIYLNERECSIQRRHQKVIEEAPSPFISDATRKAMGEQAVALAKAVGYQSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             D+D   LE+N
Sbjct: 274 VEFV--------VGKDQDFYFLEMN 290


>gi|92117652|ref|YP_577381.1| carbamoyl-phosphate synthase L chain, ATP-binding [Nitrobacter
           hamburgensis X14]
 gi|91800546|gb|ABE62921.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Nitrobacter hamburgensis X14]
          Length = 666

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 3/86 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA--ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKAL+ K  VP+  G    +   A  + A   +  P+ V K+    GGRG    +     
Sbjct: 127 AKALMEKAGVPLVAGYHGEAQDDATLQGAADRIGYPVLV-KASAGGGGRGMRIVRSAAEL 185

Query: 66  SKGGVRVESSLKSVISDIREILGSTL 91
           +   V      K+   D R ++   +
Sbjct: 186 APAVVSARREAKAAFGDDRMLIEKYV 211


>gi|74214193|dbj|BAE40349.1| unnamed protein product [Mus musculus]
          Length = 433

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|326441461|ref|ZP_08216195.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces clavuligerus ATCC 27064]
          Length = 372

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 12/104 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK-----ELPADS 66
           L    VP  +  +++      +  +   G   V+K+ +  G  GKG +      E     
Sbjct: 103 LAGLGVPCPRHRIVTDPADVSAFAEEAGGYPVVLKT-VRGGYDGKGVWVVRTEAEAADPF 161

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
           + GV V    +  +   RE+  + + +    P G  V    VE 
Sbjct: 162 RAGVPVL--AEEKVEFTRELAANVVRS----PHGQAVAYPVVES 199


>gi|313109847|ref|ZP_07795781.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa 39016]
 gi|310882283|gb|EFQ40877.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa 39016]
          Length = 429

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHRIPTAAYRNFTEVEPALAYLREQGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMNLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|298488943|ref|ZP_07006966.1| Phosphoribosylamine--glycine ligase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156441|gb|EFH97538.1| Phosphoribosylamine--glycine ligase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 431

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|284988774|ref|YP_003407328.1| carbamoyl-phosphate synthase L chain ATP- binding protein
           [Geodermatophilus obscurus DSM 43160]
 gi|284062019|gb|ADB72957.1| Carbamoyl-phosphate synthase L chain ATP- binding protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 501

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYV 44
           A+ L+    +P+  GVV  + SV  A      +  PL +
Sbjct: 115 ARRLMADAGLPLLPGVVEPVGSVDEAREVAARIGYPLII 153


>gi|229133622|ref|ZP_04262449.1| Biotin carboxylase [Bacillus cereus BDRD-ST196]
 gi|228650022|gb|EEL06030.1| Biotin carboxylase [Bacillus cereus BDRD-ST196]
          Length = 445

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 99/331 (29%), Gaps = 53/331 (16%)

Query: 12  LRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ++  +VPV  G+   I +   A    K +  P  ++K+    GG G              
Sbjct: 123 MQAADVPVVPGITTNIETAEEAIEIAKQIGYP-LMLKASAGGGGIGM-----------QL 170

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +  E +L       +    +     +        +  ++E          + LL D    
Sbjct: 171 METEQTLTKAFESNKTRAQNFFGNGEMYLERYIADAHHIE----------IQLLADTHGN 220

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-----VTSEDVASLCDMLELQGQAR 184
            V          + E   +   QK+ +    P +         E        L       
Sbjct: 221 TVYL-------WERECSVQRRNQKVIEEAPSPFLDEGTRKAMGEVAVQAAKALGYTNAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLL-------EINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           ++   D   N Y  F + +  L        EI  L +++   L     K+SF  + + R 
Sbjct: 274 VEFLVDDQKNFY--FLEMNTRLQVEHPVTEEITGLDLVEQQLLIAYGEKLSFTQDDVKRS 331

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E R +  ED +        ++ + L  NI               +       P   
Sbjct: 332 GHAIEAR-IYAEDPKTFFPSPGKITDLTLPTNIRI------DHFLENQVTITPFYDPMIA 384

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILIN 327
             +  G  +++  +  KI   +  V+GI  N
Sbjct: 385 KVIAHGETREEAISKLKIALEELKVEGIKTN 415


>gi|300778662|ref|ZP_07088520.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
           [Chryseobacterium gleum ATCC 35910]
 gi|300504172|gb|EFK35312.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
           [Chryseobacterium gleum ATCC 35910]
          Length = 1060

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++  +P  KG   +S   A      +  P+ V  S +  G   +  + E          
Sbjct: 676 LQELGIPQPKGRTSTSKEEAIKIANEIGYPVLVRPSYVLGGRAMEIVYAESELAHYMEHA 735

Query: 72  VESSLKSVISDIREILGSTL 91
           V++S +  +   + ++G  +
Sbjct: 736 VDASPEHPVLVDKYMVGKEI 755


>gi|284173849|ref|ZP_06387818.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           solfataricus 98/2]
 gi|172045871|sp|Q981B9|PURT_SULSO RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|261601652|gb|ACX91255.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus solfataricus
           98/2]
          Length = 397

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 26/163 (15%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P  K     +    + A K +  P  + K ++ + G G                + + +
Sbjct: 126 LPTTKYAFAENEEEVKRACKDIGFPCLI-KPEMSSSGHGHV--------------LVNKI 170

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
           ++V    RE +            G     V VE+   I  EL + L     S   + I  
Sbjct: 171 ENVEEAYRESISH--------ARGKS-RRVIVEEFVKIDTELTV-LTYRYHSNSDSIITK 220

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLE 178
           T   ++ +  +  Y +      +   +  T+      + + L 
Sbjct: 221 TIEPIEHKRPSYYYVESWHPSNVSQGVKETARGIAQKVAEELG 263


>gi|330887991|gb|EGH20652.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 431

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|294782719|ref|ZP_06748045.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           1_1_41FAA]
 gi|294481360|gb|EFG29135.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium sp.
           1_1_41FAA]
          Length = 1058

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV    ++ ++  AE  IK +  P+ V
Sbjct: 133 RDLMNELNEPVPDSAIVHTLEEAEKFIKEIGYPVIV 168


>gi|294634211|ref|ZP_06712757.1| phosphoribosylamine--glycine ligase [Edwardsiella tarda ATCC 23685]
 gi|291092356|gb|EFE24917.1| phosphoribosylamine--glycine ligase [Edwardsiella tarda ATCC 23685]
          Length = 427

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++++P A     + V  A + ++    P+ V+K+   A G+             
Sbjct: 108 SKDFLARHHIPTAAYRNFTEVEPALAYVREQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V  +L+   + I ++L         G  G     + +E+  
Sbjct: 154 -GVIVAMTLEEAEAAIHDMLA----GNAFGDAGH---RIVIEEFL 190


>gi|172040649|ref|YP_001800363.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           urealyticum DSM 7109]
 gi|171851953|emb|CAQ04929.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 1110

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 2   NIHEYQAK--ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           N+ E++ +   +LR   +P       +S   A      +  P+ V  S +  GGRG
Sbjct: 686 NLAEHRGEFGKVLRDAELPAPAFGTATSFEEAREVAANIGYPVLVRPSYVL-GGRG 740


>gi|78779359|ref|YP_397471.1| carbamoyl-phosphate synthase large subunit [Prochlorococcus marinus
           str. MIT 9312]
 gi|78712858|gb|ABB50035.1| carbamoyl-phosphate synthase large subunit [Prochlorococcus marinus
           str. MIT 9312]
          Length = 1098

 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 32/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K NV V    + S++  A+   K +     +++     GG G G           
Sbjct: 133 KESMEKINVNVCPSGIASNLAEAKEVQKKINSYPLIIRPAFTLGGVGGG----------- 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +L+  I               TG   S  + + +E      +E  L ++ D  +
Sbjct: 182 ---IAFNLEEFIELC-----------TTGLEESPRDQILIEKSLIGWKEFELEVMRDT-A 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V  + S      IE +          + + P   +T ++   L DM
Sbjct: 227 DNVVIVCS------IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDM 268


>gi|322515399|ref|ZP_08068392.1| hypothetical protein HMPREF0027_2144 [Actinobacillus ureae ATCC
           25976]
 gi|322118581|gb|EFX90811.1| hypothetical protein HMPREF0027_2144 [Actinobacillus ureae ATCC
           25976]
          Length = 197

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K + RK  + VAKG V      A    K L  P+ ++K    AG
Sbjct: 121 KEVFRKAGLKVAKGRVFKDEQDARKLAKELKFPV-IIKPNSGAG 163


>gi|311695433|gb|ADP98306.1| methylcrotonoyl-coenzyme A carboxylase 1 (alpha) [marine bacterium
           HP15]
          Length = 656

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 71/215 (33%), Gaps = 31/215 (14%)

Query: 8   AKALLRKYNVPVAKGVVISSV--HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  +++  VPV  G   ++       +A K +  P  ++K+    GGRG    +     
Sbjct: 119 SKIAMQEAGVPVVPGYEGNNANDDELIAAAKDIGYP-LMIKASAGGGGRGMRLVESES-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  ++K   S+ ++  G                 + +E      R + + +  D
Sbjct: 176 -----ELADNIKRARSESKQAFGDD--------------ELILEKAVIEPRHVEIQVFAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
           R    V      +    ++   +   ++     + P L     E           +G   
Sbjct: 217 RHGNAVYL---GERDCSVQRRHQKVVEEAPSPFVTPELRQAMGEAAVKAALACNYEGAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
           ++   D   N Y  F + +  L   +P+  +  G+
Sbjct: 274 VEFLVDKHRNFY--FLEMNTRLQVEHPVTELITGQ 306


>gi|306823715|ref|ZP_07457090.1| D-alanine-D-alanine ligase [Bifidobacterium dentium ATCC 27679]
 gi|309803027|ref|ZP_07697128.1| D-ala D-ala ligase N-terminal domain protein [Bifidobacterium
           dentium JCVIHMP022]
 gi|304553422|gb|EFM41334.1| D-alanine-D-alanine ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220494|gb|EFO76805.1| D-ala D-ala ligase N-terminal domain protein [Bifidobacterium
           dentium JCVIHMP022]
          Length = 378

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 64/213 (30%), Gaps = 22/213 (10%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    +PVA G+ + +     +      G   +   Q  AG R     K   A S  
Sbjct: 149 KVLLAAAGIPVAPGITLDARDYDAACAFAANGETMLAAVQA-AGLRYPLFVKPSRAGSSF 207

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV               +                   V VE G D  RE+  ++L  +  
Sbjct: 208 GVTKVEREGDAAELAAAVF----------EASHHDWRVLVEQGID-AREIECAVLCPKAG 256

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
                 AS  G + +++ A    Q       D        + + +     L  +      
Sbjct: 257 DEPR--ASWPGEIVLDKRAGGDDQFY-----DFDSKYMDAEASHVEVPAALPQETLELVR 309

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
           +      KAF   D + L      +  +G++ V
Sbjct: 310 ETAK---KAFKAVDGTGLSRVDTFVTADGKVMV 339


>gi|257483329|ref|ZP_05637370.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 424

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 101 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 145

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 146 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 197

Query: 129 GMVA 132
            +  
Sbjct: 198 VLPM 201


>gi|224283439|ref|ZP_03646761.1| phosphoribosylamine--glycine ligase [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287791|ref|YP_003939049.1| phosphoribosylamine-glycine ligase [Bifidobacterium bifidum S17]
 gi|311064676|ref|YP_003971401.1| phosphoribosylamine--glycine ligase PurD [Bifidobacterium bifidum
           PRL2010]
 gi|313140593|ref|ZP_07802786.1| phosphoribosylamine-glycine ligase [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251727|gb|ADO53475.1| phosphoribosylamine-glycine ligase [Bifidobacterium bifidum S17]
 gi|310866995|gb|ADP36364.1| PurD Phosphoribosylamine--glycine ligase [Bifidobacterium bifidum
           PRL2010]
 gi|313133103|gb|EFR50720.1| phosphoribosylamine-glycine ligase [Bifidobacterium bifidum NCIMB
           41171]
          Length = 421

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ ++N+P A+     ++  + + ++    P+ VVK+   A G+             
Sbjct: 109 AKQLMARHNIPTAQYRTFDNLEDSVAYVREHGAPI-VVKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V   + + I+ + +I     I  + G  G+    V +ED  +
Sbjct: 155 -GVTVAMDVDTAITALDDI----FIDHRFGKAGA---KVVIEDFLE 192


>gi|222111046|ref|YP_002553310.1| carbamoyl-phosphate synthase l chain ATP-binding [Acidovorax ebreus
           TPSY]
 gi|221730490|gb|ACM33310.1| Carbamoyl-phosphate synthase L chain ATP-binding [Acidovorax ebreus
           TPSY]
          Length = 682

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G    I+   AA    K +  P+ +  S                  
Sbjct: 119 SKKLANQAGVNTIPGYNDPIAGPEAAVEIAKGIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K               +          + +++E      R + + +L D
Sbjct: 164 GGKGLRVAFNDKEAFEGFASCQNEARNSFGD-------DRIFIEKFVQEPRHIEIQVLGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     I D       E   +L   +  Q    
Sbjct: 217 AHGN---VIYLNERECSIQRRHQKVIEEAPSPFISDATRKAMGEQAVALAKAVGYQSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             D+D   LE+N
Sbjct: 274 VEFV--------VGKDQDFYFLEMN 290


>gi|172041440|ref|YP_001801154.1| phosphoribosylglycinamide formyltransferase 2 [Corynebacterium
           urealyticum DSM 7109]
 gi|171852744|emb|CAQ05720.1| phosphoribosylglycinamide formyltransferase 2 [Corynebacterium
           urealyticum DSM 7109]
          Length = 437

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 24/105 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P       S+     +  + +  P  VVK  + + GRG+             V     
Sbjct: 130 GIPTGVHRFASTPEELTAVAEEVGFPC-VVKPVVSSAGRGQSY-----------VASADE 177

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           L +        L    +T            V VE       E+ L
Sbjct: 178 LDAAWDFA---LSDVRVT---------CEKVIVEKFVPFDYEITL 210


>gi|78188337|ref|YP_378675.1| Acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           chlorochromatii CaD3]
 gi|78170536|gb|ABB27632.1| Acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           chlorochromatii CaD3]
          Length = 447

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +    VPV  G   +++    A +  K +  P+ ++K     GG+G     E    
Sbjct: 119 AKATMIAAGVPVVPGSPGLVTDAKDALAIAKKIGYPI-IIKPTAGGGGKGMRVVTEDS-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                ++E +L +  S+  +  G+              + VY+E   +  R + + +L D
Sbjct: 176 -----QLEKALSTARSEAEQAFGN--------------SGVYIEKYLENPRHVEIQILSD 216

Query: 126 RTSGMV 131
           +    +
Sbjct: 217 QHGNTI 222


>gi|70734167|ref|YP_257807.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens Pf-5]
 gi|68348466|gb|AAY96072.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens Pf-5]
          Length = 429

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEEAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|78358082|ref|YP_389531.1| D-alanine--D-alanine ligase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220487|gb|ABB39836.1| D-alanine--D-alanine ligase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 349

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 75/233 (32%), Gaps = 46/233 (19%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +H+   K ++R   +P A  VVIS    AE+A  +LP PL+V                E 
Sbjct: 107 LHKGMTKHIVRDNGIPTADFVVISDP--AEAAAVSLPYPLFVK------------PVAEG 152

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G      + + + +         LI +   P       V VE      REL + +
Sbjct: 153 TGIGVGAASKVQNPQELAAACA-----RLIDRHRQP-------VLVETFL-CGRELTVGI 199

Query: 123 LVDRTSGM------VAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC-D 175
                         V F  + +  +       +Y +++   L D      +  VA     
Sbjct: 200 TGTGAGARTLGALEVVFAPAAESDVYGYVNKAEYLERVQYHLADDADAQKARHVALAAWR 259

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI----IMKNGRLRVLDS 224
            L  +   R+D       +         + +E+NPL     +  +  +    +
Sbjct: 260 ALGCRDGGRVDLRFDARGV--------PNFIEVNPLAGLNPVNSDLPIMCYKA 304


>gi|150388522|ref|YP_001318571.1| FdrA family protein [Alkaliphilus metalliredigens QYMF]
 gi|149948384|gb|ABR46912.1| FdrA family protein [Alkaliphilus metalliredigens QYMF]
          Length = 525

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 260 LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGADQDKVAAAFKI 314
            + +   GNIG +            +I   G   +  +     D+        +    + 
Sbjct: 183 FANVVRKGNIGIVGASGTGIQEVSILIHRLGEGVSQVIGTGGRDLKKEIGGIMMQQGIEA 242

Query: 315 ITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAES 374
           + +D    G+++ I       + + + +L+ +       P+V+   G +      LI + 
Sbjct: 243 LQNDPET-GVIVLI--SKPPDEEVAERVLALI--AHSEKPVVVNFIGGH----LNLIEKY 293

Query: 375 GLNVITAIDLDDAAQKIVHAVKG 397
           G        L+DAAQK V  +KG
Sbjct: 294 GRT--PCTTLEDAAQKAVALLKG 314


>gi|170760793|ref|YP_001788939.1| biotin carboxylase [Clostridium botulinum A3 str. Loch Maree]
 gi|169407782|gb|ACA56193.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 448

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +    +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIADEIGYPVVVKAS 160


>gi|168183675|ref|ZP_02618339.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum Bf]
 gi|237797054|ref|YP_002864606.1| biotin carboxylase [Clostridium botulinum Ba4 str. 657]
 gi|182673266|gb|EDT85227.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum Bf]
 gi|229263687|gb|ACQ54720.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 448

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++ +  VPV  G   VI +   A +    +  P+ V  S
Sbjct: 119 ARDIMIRAGVPVIPGSNGVIHNEEEALNIADEIGYPVVVKAS 160


>gi|27366726|ref|NP_762253.1| protein acetyltransferase [Vibrio vulnificus CMCP6]
 gi|27358293|gb|AAO07243.1| Protein acetyltransferase [Vibrio vulnificus CMCP6]
          Length = 892

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 76/223 (34%), Gaps = 25/223 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ ++  V    + S    A    + +  P+ V         + +       +D +G +
Sbjct: 499 LLKLFHFDVLPTWIASDTSEAVHIAEQIGYPVAV---------KLRSPDIAHKSDVQGVM 549

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
              S+ + V S    IL  T +   +      ++ + V+  A +    E+ + ++ D+  
Sbjct: 550 LNLSNSQEVASAADAILDRTKLAYPSAN----IHGLLVQGMAKLAGGEEIRVKVITDKVF 605

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARIDG 187
           G V  +   QGG +  E             + PL + +    +        ++ Q   + 
Sbjct: 606 GPVILLG--QGGSEWSEARDATA------ALPPLNMTLARYQIVRAIKEGHIRLQKLPEP 657

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            D+   L K        ++E+  +  +    +       +  D
Sbjct: 658 MDVL-GLAKFLVRISQMVVELPQIKELDIHPVLANGEHFTILD 699


>gi|118580438|ref|YP_901688.1| acetyl-CoA carboxylase, biotin carboxylase [Pelobacter propionicus
           DSM 2379]
 gi|118503148|gb|ABK99630.1| acetyl-CoA carboxylase carboxyltransferase subunit alpha
           [Pelobacter propionicus DSM 2379]
          Length = 446

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 75/230 (32%), Gaps = 34/230 (14%)

Query: 16  NVPVAKG---VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            VP+  G    V  SV  A +  K +  P+ ++K+    GGRG        A       +
Sbjct: 127 GVPILPGTKEGVA-SVDEAITIAKEIGFPV-IIKATAGGGGRGMKIVHSQAA-------L 177

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
            ++  +  ++ +   G+                VY+E   +  R + + +L D+      
Sbjct: 178 PNAFATARAEAQSGFGNP--------------EVYIEKYCEHPRHVEIQILADKHGN--- 220

Query: 133 FIASTQGGMDIEEVAKDYPQKIF-KLLIDPLIGVTSEDVASLCDMLELQGQARIDG-GDL 190
            I   +    I+   +   ++    +    L     E        +       ++   D 
Sbjct: 221 VIHLGERDCSIQRRHQKLIEEAPSTISTPELRAAMGEAAVRAAASVGYNSVGTVEFLVDK 280

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI 239
             N Y  F + +  +   +P+  M  G  +     + +      YR  DI
Sbjct: 281 ENNFY--FMEMNTRVQVEHPVTEMITGVDIVREQIRSAAGCPLRYRQEDI 328


>gi|330950084|gb|EGH50344.1| Urea amidolyase-related protein [Pseudomonas syringae Cit 7]
          Length = 807

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 23/121 (19%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A +T+  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSLESAIAAARTIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 T 127
            
Sbjct: 217 Q 217


>gi|313672530|ref|YP_004050641.1| biotin carboxylase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939286|gb|ADR18478.1| biotin carboxylase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 505

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+A++ +  VP   G    I  V  A+   + +  P+ ++K+ ++ GG    R      D
Sbjct: 120 ARAVMAEAGVPTVPGTKNPIRDVEEAKKVAREIGYPI-MLKA-VYGGGGKGMRLVHKEED 177

Query: 66  SKGGVRVESS 75
            +   R+ SS
Sbjct: 178 FESSFRMASS 187


>gi|293556689|ref|ZP_06675253.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1039]
 gi|291601151|gb|EFF31439.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1039]
          Length = 459

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|288801268|ref|ZP_06406723.1| phosphoribosylamine--glycine ligase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288331879|gb|EFC70362.1| phosphoribosylamine--glycine ligase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 422

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++N+P A+   V   +++   + +++L  P YV+K+     G+           
Sbjct: 110 AKAFMQRHNIPTARYKTVTAETLNEGIAFLESLKAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    +++E+LG           G+    V +E+      E  + +L D
Sbjct: 158 ---GVLILPTLEEAKKELQEMLGGMF--------GNASATVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVA 132
             +  + 
Sbjct: 206 GKNYKIL 212


>gi|259503438|ref|ZP_05746340.1| carbamoyl-phosphate synthase [Lactobacillus antri DSM 16041]
 gi|259168516|gb|EEW53011.1| carbamoyl-phosphate synthase [Lactobacillus antri DSM 16041]
          Length = 1060

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   PV     +S+V  A      +  P+ V
Sbjct: 133 KELMQQLGEPVPASQTVSTVAEALDFAHQIGYPVIV 168


>gi|257063531|ref|YP_003143203.1| biotin carboxylase /acetyl-coenzyme A carboxylase carboxyl
           transferase subunit alpha [Slackia heliotrinireducens
           DSM 20476]
 gi|256791184|gb|ACV21854.1| biotin carboxylase /acetyl-coenzyme A carboxylase carboxyl
           transferase subunit alpha [Slackia heliotrinireducens
           DSM 20476]
          Length = 448

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  +  Y VP   G   V+ +V  A +  + +  P+ +  S
Sbjct: 119 ARETMTSYGVPTVPGSDGVVDTVEEARAFAEEVGYPVLIKAS 160


>gi|182438270|ref|YP_001825989.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178466786|dbj|BAG21306.1| putative phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 383

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 37/177 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  ++S    A +  + + G   ++K+ +  G  GK            GV 
Sbjct: 110 LLEIGAPCPRHRIVSDPADAAAFAEEVGGFPVILKT-VRGGYDGK------------GVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+  D +REL  +++      + 
Sbjct: 157 VVRSEADAADPFR--------------AGVPV---LAEEKVDFVRELAANIVRSPHGQAV 199

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               + S Q     + V    P+       + L G   +    +   L + G   ++
Sbjct: 200 AYPVVESIQVDGVCDTVIAPAPEL-----DEELAGEAQQLALRIAAELGVVGHLAVE 251


>gi|296282053|ref|ZP_06860051.1| phosphoribosylglycinamide formyltransferase 2 [Citromicrobium
           bathyomarinum JL354]
          Length = 385

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 49/171 (28%), Gaps = 39/171 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            V  ++    +S+    +A +    P  V+K  + + G+G+   ++       G+     
Sbjct: 118 GVRTSRYGYATSLDEVRAAAEDTGFPC-VIKPVMSSSGKGQSTVQDA-----EGLEAAWD 171

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
                  +  + G                 V VE   D   E  ++LL  R    V F  
Sbjct: 172 Y-----AVANMRGDRA-------------RVIVEQFIDFDYE--ITLLTVRHKNGVTFCP 211

Query: 134 -IASTQGGMDIEEVA--KDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
            I   Q   D +E        +               E    + D L   G
Sbjct: 212 PIGHRQERGDYQESWQPHGMSEAALTQA--------QEMARKVVDNLGGHG 254


>gi|293571004|ref|ZP_06682047.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E980]
 gi|291608930|gb|EFF38209.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E980]
          Length = 459

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|291303583|ref|YP_003514861.1| phosphoribosylamine/glycine ligase [Stackebrandtia nassauensis DSM
           44728]
 gi|290572803|gb|ADD45768.1| phosphoribosylamine/glycine ligase [Stackebrandtia nassauensis DSM
           44728]
          Length = 411

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 33/128 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP AK     +   AE+A+     P YVVK    A G+             
Sbjct: 101 AKEIMAAAGVPTAKAHTCHTAAEAEAALDEFG-PPYVVKDDALAAGK------------- 146

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S     ++                      + V +E+  D   E+ L ++ D T
Sbjct: 147 -GVVVTSDRDEALAHAAA-----------------CDTVVIEEFLD-GPEVSLFVVTDGT 187

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 188 TAVPLLPA 195


>gi|289191983|ref|YP_003457924.1| phosphoribosylglycinamide formyltransferase 2 [Methanocaldococcus
           sp. FS406-22]
 gi|288938433|gb|ADC69188.1| phosphoribosylglycinamide formyltransferase 2 [Methanocaldococcus
           sp. FS406-22]
          Length = 389

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 54/158 (34%), Gaps = 31/158 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     S+     A++ L  P  VVK  + + G+G+             VR E  
Sbjct: 125 GLRTAKYAFADSLEELRDAVEKLGLPC-VVKPIMSSSGKGQSV-----------VRSEED 172

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           ++      +E           G  G   N V VE+  +   E  ++LL  RT+    F  
Sbjct: 173 IEKAWKIAKE-----------GARGIG-NRVIVEEFINFDYE--ITLLTARTAEGTKFCE 218

Query: 134 -IASTQGGMDIEEVA--KDYPQKIFKLLIDPLIGVTSE 168
            I   Q   D  E     D   ++ K   D    VT  
Sbjct: 219 PIGHIQIDGDYHESWQPHDMSDELKKKAQDIAKKVTDA 256


>gi|258620639|ref|ZP_05715676.1| phosphoribosylamine--glycine ligase [Vibrio mimicus VM573]
 gi|258587154|gb|EEW11866.1| phosphoribosylamine--glycine ligase [Vibrio mimicus VM573]
          Length = 429

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHNIPTAAYANFTEIEPALAYVREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGSAG---SRVVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|255950296|ref|XP_002565915.1| Pc22g20150 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592932|emb|CAP99303.1| Pc22g20150 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1168

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 67/226 (29%), Gaps = 45/226 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + ++P+A+   + +V  A  A + +  P+ V  +    G                G  
Sbjct: 221 LNEIDIPIAESTAVETVEDALKAAEEVGYPIIVRSAYALGGL---------------GSG 265

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             S+                +   +  + S    + VE      +E+   ++ D  +  +
Sbjct: 266 FASNPDE-------------LRDLSSRSLSLSPQILVEKSLKGWKEVEYEVVRDADNNCI 312

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQGQAR 184
                     ++E            +++ P   ++ E+          +   L + G+  
Sbjct: 313 TV-------CNMENFDPLGIHTGDSIVVAPSQTLSDEEYHMLRTAAIKIVRHLGVVGECN 365

Query: 185 IDGGDLFPNL-YKAFCDKDMSLLEINPLIIMKNGRLRVL-DSKISF 228
           +        L Y+   + +  L   + L     G       +KI  
Sbjct: 366 VQYALQPDGLDYRV-IEVNARLSRSSALASKATGYPLAYTAAKIGL 410


>gi|168206800|ref|ZP_02632805.1| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Clostridium perfringens E str. JGS1987]
 gi|170661778|gb|EDT14461.1| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Clostridium perfringens E str. JGS1987]
          Length = 779

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYENIDEAKKDFRLFKNEKIVIKPKSTNFGLGISIFPGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|167527261|ref|XP_001747963.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773712|gb|EDQ87350.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1229

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           N+ VAKG    +      A K +     V+K    A G G
Sbjct: 574 NIRVAKGYTCDTADELVEAYKLIGTETVVIKPVFGAAGEG 613


>gi|116496403|gb|ABJ98969.1| carbamoyl-phosphate synthetase [Herbertia sp. CD020]
          Length = 561

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 19/85 (22%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L      K    VA    + S+  A  A + L  P+ V         R       L +
Sbjct: 480 RKLFAERVSKIGGQVAPSCAVYSIQEALEAAEKLGYPVMV---------RAAFSLGGLGS 530

Query: 65  DSKGGVRVESSLKSVISDIREILGS 89
                    S+   + +  ++ L  
Sbjct: 531 G------FASTKDELKALAQQALAH 549


>gi|189346008|ref|YP_001942537.1| phosphoribosylamine--glycine ligase [Chlorobium limicola DSM 245]
 gi|189340155|gb|ACD89558.1| phosphoribosylamine/glycine ligase [Chlorobium limicola DSM 245]
          Length = 435

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 22/138 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +R++ +P +   V +    A + I            Q  +  R     K     + 
Sbjct: 117 AKEFMRRHGIPTSGYRVFNRKDEALAYI------------QALSSDRFPQVIKASGLCAG 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +  +  +  +REI    +        GS  + V +E+          S+ V   
Sbjct: 165 KGVIVAAEREEALLALREIFEDRIF-------GSAADEVVIEEFLRGEE---ASVFVLTD 214

Query: 128 SGMVAFIASTQGGMDIEE 145
                   S Q    I E
Sbjct: 215 GRSYRLFLSAQDHKRIGE 232


>gi|69245732|ref|ZP_00603598.1| Acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           DO]
 gi|257880235|ref|ZP_05659888.1| acetyl-CoA carboxylase [Enterococcus faecium 1,230,933]
 gi|257883036|ref|ZP_05662689.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,502]
 gi|257885281|ref|ZP_05664934.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,501]
 gi|257891381|ref|ZP_05671034.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,410]
 gi|257893622|ref|ZP_05673275.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,408]
 gi|258614424|ref|ZP_05712194.1| acetyl-CoA carboxylase biotin carboxylase subunit [Enterococcus
           faecium DO]
 gi|260560467|ref|ZP_05832641.1| acetyl-CoA carboxylase [Enterococcus faecium C68]
 gi|293563285|ref|ZP_06677735.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1162]
 gi|294621387|ref|ZP_06700559.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           U0317]
 gi|314939223|ref|ZP_07846477.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133a04]
 gi|314942041|ref|ZP_07848899.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133C]
 gi|314948386|ref|ZP_07851775.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0082]
 gi|314951240|ref|ZP_07854295.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133A]
 gi|314991663|ref|ZP_07857133.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133B]
 gi|314996789|ref|ZP_07861802.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133a01]
 gi|68195625|gb|EAN10065.1| Acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           DO]
 gi|257814463|gb|EEV43221.1| acetyl-CoA carboxylase [Enterococcus faecium 1,230,933]
 gi|257818694|gb|EEV46022.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,502]
 gi|257821133|gb|EEV48267.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,501]
 gi|257827741|gb|EEV54367.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,410]
 gi|257830001|gb|EEV56608.1| acetyl-CoA carboxylase [Enterococcus faecium 1,231,408]
 gi|260073469|gb|EEW61797.1| acetyl-CoA carboxylase [Enterococcus faecium C68]
 gi|291599034|gb|EFF30079.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           U0317]
 gi|291604737|gb|EFF34221.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1162]
 gi|313589084|gb|EFR67929.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133a01]
 gi|313593754|gb|EFR72599.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133B]
 gi|313596592|gb|EFR75437.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133A]
 gi|313599167|gb|EFR78012.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133C]
 gi|313641474|gb|EFS06054.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0133a04]
 gi|313645178|gb|EFS09758.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium TX0082]
          Length = 459

 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|332296249|ref|YP_004438172.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Thermodesulfobium narugense DSM 14796]
 gi|332179352|gb|AEE15041.1| acetyl coenzyme A synthetase (ADP forming), alpha domain protein
           [Thermodesulfobium narugense DSM 14796]
          Length = 702

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 79/225 (35%), Gaps = 20/225 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + + +   Y   + K ++ ++   A    + L  P+ +                 L    
Sbjct: 490 EVREVFEGYGFTLPKTLLATTSLEASDFAEELGFPVVM----------KIASPDILHKTD 539

Query: 67  KGGVRVE-SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            GGV+V   +   VI    +I    +I+ +     + +  V V+      +++ +  + D
Sbjct: 540 VGGVKVGLRNKDEVIRAFDDI----MISVRRYFPDAEIWGVSVQQMLPPGKDVIIGSVKD 595

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
              G +       GG+ +E +     + +     D +  +       L       +G  +
Sbjct: 596 PQFGHMIMFG--LGGIYVEVLKDVSFRIVPVSESDAMNMIREIKSFKLLSGARGEKGVDQ 653

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
               D    +     D  ++  L+INPL + + G +  +D +++ 
Sbjct: 654 NAIVDAILRVSNLVTDFPEIVELDINPLRVFEEGAV-AIDMRLTV 697


>gi|296269334|ref|YP_003651966.1| carbamoyl-phosphate synthase large subunit [Thermobispora bispora
           DSM 43833]
 gi|296092121|gb|ADG88073.1| carbamoyl-phosphate synthase, large subunit [Thermobispora bispora
           DSM 43833]
          Length = 1092

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 14/43 (32%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L +  +   K     +   A      +  P+ V  S +  G
Sbjct: 680 RVLAEAGLLAPKHGTARTAEEAVEVASRIGYPVLVRPSYVLGG 722


>gi|289625296|ref|ZP_06458250.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647821|ref|ZP_06479164.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 431

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|261208984|ref|ZP_05923389.1| acetyl-CoA carboxylase [Enterococcus faecium TC 6]
 gi|289565204|ref|ZP_06445656.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           D344SRF]
 gi|293569281|ref|ZP_06680579.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1071]
 gi|294615002|ref|ZP_06694891.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1636]
 gi|294619092|ref|ZP_06698587.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1679]
 gi|260077023|gb|EEW64745.1| acetyl-CoA carboxylase [Enterococcus faecium TC 6]
 gi|289163025|gb|EFD10873.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           D344SRF]
 gi|291587987|gb|EFF19837.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1071]
 gi|291592133|gb|EFF23753.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1636]
 gi|291594753|gb|EFF26135.1| acetyl-CoA carboxylase, biotin carboxylase [Enterococcus faecium
           E1679]
          Length = 459

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|220925868|ref|YP_002501170.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium
           nodulans ORS 2060]
 gi|219950475|gb|ACL60867.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium
           nodulans ORS 2060]
          Length = 451

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 47/208 (22%)

Query: 16  NVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +P V   +G V      A      +  P+ + K+    GGRG          ++    +
Sbjct: 127 GIPCVPGSEGGVAD-PDEARRIAADIGYPVLI-KAASGGGGRGM-------KVARSEEDL 177

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E++L +  ++ +   G                 VY+E   +  R + + +L D       
Sbjct: 178 ETALATARTEAKAAFGDD--------------AVYIEKYLEKPRHIEVQVLGDGRG---- 219

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID-----G 187
                 G + + E      ++  K+      G +    A + + +       +      G
Sbjct: 220 ------GAIHLAERDCSLQRRHQKVW---EEGPSPALNAEMRERIGGICARAMQELGYTG 270

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMK 215
                 LY+   D +   +E+N  I ++
Sbjct: 271 AGTIEFLYE---DGEFYFIEMNTRIQVE 295


>gi|403491|gb|AAA19012.1| glycinamide ribonucleotide synthetase [Mus musculus]
          Length = 433

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|21231935|ref|NP_637852.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66767938|ref|YP_242700.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113664|gb|AAM41776.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573270|gb|AAY48680.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. campestris str. 8004]
          Length = 380

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGAPC-VLKTR-RFGYDGKGQFR 152


>gi|330989160|gb|EGH87263.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 431

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|257898967|ref|ZP_05678620.1| acetyl-CoA carboxylase [Enterococcus faecium Com15]
 gi|257836879|gb|EEV61953.1| acetyl-CoA carboxylase [Enterococcus faecium Com15]
          Length = 459

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|257888596|ref|ZP_05668249.1| acetyl-CoA carboxylase [Enterococcus faecium 1,141,733]
 gi|257824650|gb|EEV51582.1| acetyl-CoA carboxylase [Enterococcus faecium 1,141,733]
          Length = 459

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|255527075|ref|ZP_05393964.1| phosphoribosylamine/glycine ligase [Clostridium carboxidivorans P7]
 gi|296188139|ref|ZP_06856531.1| phosphoribosylamine--glycine ligase [Clostridium carboxidivorans
           P7]
 gi|255509227|gb|EET85578.1| phosphoribosylamine/glycine ligase [Clostridium carboxidivorans P7]
 gi|296047265|gb|EFG86707.1| phosphoribosylamine--glycine ligase [Clostridium carboxidivorans
           P7]
          Length = 415

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+  V  +   A   +KT   P+ V+K+   A G+             
Sbjct: 106 SKEFMKKYGVKTAEYEVFENEDEALKYLKTCAYPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +            E +   ++      +G     V +E+  +      LS+ 
Sbjct: 152 -GVVIC----EEYKMAEETIKDFMVNDIFKGSGK---KVVIEEFLEGPEASILSIT 199


>gi|242279639|ref|YP_002991768.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
           salexigens DSM 2638]
 gi|242122533|gb|ACS80229.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
           salexigens DSM 2638]
          Length = 1077

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 53/165 (32%), Gaps = 37/165 (22%)

Query: 7   QAKALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +++ L R    K  + V    +  ++       K +  P+ +  +    G          
Sbjct: 127 ESRELFRAAMEKIGLKVPTSRIARNIDDVRRCGKEISFPIIIRPAFTLGG---------- 176

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              + GGV    +++ +     + + ++L            N V +E+     +E  L +
Sbjct: 177 ---TGGGV--AYNMEDLEDIAMQGISASLQ-----------NEVMLEESILGWKEYELEV 220

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
           + DR       I S      IE +          + + P   +T 
Sbjct: 221 MRDRKDNC-VIICS------IENIDPMGVHTGDSITVAPAQTLTD 258


>gi|160944594|ref|ZP_02091821.1| hypothetical protein FAEPRAM212_02107 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443778|gb|EDP20782.1| hypothetical protein FAEPRAM212_02107 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104397|emb|CBL01941.1| carbamoyl-phosphate synthase large subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 1083

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL + N+P A G  + ++  A +A + +  P+ +  S +  G
Sbjct: 682 ELLERCNIPRAPGRTVFNLDEALAAAEEIGLPVLMRPSYVLGG 724


>gi|156936963|ref|YP_001434759.1| SSU ribosomal protein S6P modification protein [Ignicoccus
           hospitalis KIN4/I]
 gi|156565947|gb|ABU81352.1| SSU ribosomal protein S6P modification protein [Ignicoccus
           hospitalis KIN4/I]
          Length = 293

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           Y +  +L    VPV K  ++ +       +K L     VVK   ++ G G  R  E
Sbjct: 109 YVSMKVLESNGVPVPKTFLVRTRFELLEKVKELG--EVVVKPLSNSLGLGVNRVDE 162


>gi|691791|gb|AAC53250.1| glycinamide ribonucleotide synthetase [Mus musculus]
          Length = 433

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 21/106 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+    ++   A S I +   P  VVK+   A G+             
Sbjct: 110 AKEFMDRHEIPTAQWRAFTNPEDACSFITSANFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  S       ++EI    +  K  G  G     V VE+  +
Sbjct: 157 -GVIVAKSQAEACRAVQEI----MQEKSFGAAG---ETVVVEEFLE 194


>gi|88658256|ref|YP_507303.1| propionyl-CoA carboxylase, alpha subunit [Ehrlichia chaffeensis
           str. Arkansas]
 gi|88599713|gb|ABD45182.1| propionyl-CoA carboxylase, alpha subunit [Ehrlichia chaffeensis
           str. Arkansas]
          Length = 655

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +     V +  G   ++ SVH A+   K++  P+ +               K     
Sbjct: 119 SKKIAESAKVNIIPGYMGIVDSVHEAKEIAKSIGFPVMI---------------KATAGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S + +               + G        +++E   ++ R + + ++ D
Sbjct: 164 GGKGMRIVKSSEEIEQAFTSATNEAAKNFRDG-------RIFIEKYVELPRHIEIQIIAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLELQGQAR 184
           +   +V      +    I+   +   ++     +D            +L   +       
Sbjct: 217 KHGNIVCL---GERECSIQRHNQKVIEETPSPFLDEETRQKMYQQCVNLAKKVGYYSAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I+   D     Y  F + +  L   +P+  +  G
Sbjct: 274 IEFIVDQDKQFY--FLEMNTRLQVEHPVTELVTG 305


>gi|88807226|ref|ZP_01122738.1| acetyl-CoA carboxylase [Synechococcus sp. WH 7805]
 gi|88788440|gb|EAR19595.1| acetyl-CoA carboxylase [Synechococcus sp. WH 7805]
          Length = 447

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 91/277 (32%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VP   G   ++S    A      +  P+ ++K+    GGR           
Sbjct: 120 AKTTMQNVGVPTVPGSEGLLSGPDEAADLAMAMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   + +     L      +     G+    +Y+E   D  R + + +L D
Sbjct: 168 ---GMRLVQSPDQLEN-----LFKAAQGEAEAAFGNP--GLYMEKFIDRPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +D  + +   E   +    +  +G   
Sbjct: 218 RHGH---VVHLGERDCSIQRRHQKLLEEAPSPALDQNLRLRMGEAAVAAARSINYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D     Y  F + +  +   +P+  M  G  L     +I+  +        I EL
Sbjct: 275 VEFLLDRNGGFY--FMEMNTRIQVEHPVTEMVTGIDLIAEQLRIAGGEPISVSQDQI-EL 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
           R  + E     E   HN       G I       G G
Sbjct: 332 RGHAIECRINAEDATHNFR--PAPGRITGWLPPGGPG 366


>gi|302339679|ref|YP_003804885.1| phosphoribosylamine/glycine ligase [Spirochaeta smaragdinae DSM
           11293]
 gi|301636864|gb|ADK82291.1| phosphoribosylamine/glycine ligase [Spirochaeta smaragdinae DSM
           11293]
          Length = 418

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 14/93 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
            KA +++Y +P   G ++++    E AI+   G   ++K   +   R K  F        
Sbjct: 107 GKAFMKRYGIPSTAGTLVTNASELERAIQENSGRRLIIK--KNGLSRWKAMFDSDQ---- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
                    + ++    ++L    I  +    G
Sbjct: 161 --------PEKLLEYGSQLLEKDSILLEQYHVG 185


>gi|296391688|ref|ZP_06881163.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa PAb1]
          Length = 429

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHRIPTAAYRNFTEVEPALAYLREQGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMNLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|312139569|ref|YP_004006905.1| carbamoyl-phosphate synthase long subunit carb [Rhodococcus equi
           103S]
 gi|325672547|ref|ZP_08152243.1| carbamoyl-phosphate synthase, large subunit [Rhodococcus equi ATCC
           33707]
 gi|311888908|emb|CBH48221.1| carbamoyl-phosphate synthase long subunit CarB [Rhodococcus equi
           103S]
 gi|325556424|gb|EGD26090.1| carbamoyl-phosphate synthase, large subunit [Rhodococcus equi ATCC
           33707]
          Length = 1115

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 695 RVLTEAGLPAPKFGTATTFEGAREIASGIGYPVLVRPSYVL-GGRG 739


>gi|260886442|ref|ZP_05897705.1| carbamoyl-phosphate synthase, large subunit [Selenomonas sputigena
           ATCC 35185]
 gi|330838795|ref|YP_004413375.1| carbamoyl-phosphate synthase, large subunit [Selenomonas sputigena
           ATCC 35185]
 gi|260863824|gb|EEX78324.1| carbamoyl-phosphate synthase, large subunit [Selenomonas sputigena
           ATCC 35185]
 gi|329746559|gb|AEB99915.1| carbamoyl-phosphate synthase, large subunit [Selenomonas sputigena
           ATCC 35185]
          Length = 1076

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +LR+ N+P  KG+ ++ V +A      +  P+ V  S +  G   +  +KE        
Sbjct: 675 EVLRQTNIPCPKGISVTDVESAVEGAAAIGYPVMVRPSYVLGGRAMEIVYKEEELRDYLN 734

Query: 70  VRVESSLK 77
             V+ +  
Sbjct: 735 RAVKVTPD 742


>gi|300780474|ref|ZP_07090330.1| phosphoribosylamine-glycine ligase [Corynebacterium genitalium ATCC
           33030]
 gi|300534584|gb|EFK55643.1| phosphoribosylamine-glycine ligase [Corynebacterium genitalium ATCC
           33030]
          Length = 423

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A+   ++     +  +K    P +VVK    AGG+             
Sbjct: 100 AKEVMATAGVRTARSKRVTDPDQVKVELKNFG-PNFVVKDDGLAGGK------------- 145

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V   ++  ++  + ++
Sbjct: 146 -GVVVTDDVREAVAHAKAVI 164


>gi|169342883|ref|ZP_02863914.1| putative glutamate--cysteine ligase [Clostridium perfringens C str.
           JGS1495]
 gi|169299140|gb|EDS81212.1| putative glutamate--cysteine ligase [Clostridium perfringens C str.
           JGS1495]
          Length = 778

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYDNIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFPGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|156376522|ref|XP_001630409.1| predicted protein [Nematostella vectensis]
 gi|156217429|gb|EDO38346.1| predicted protein [Nematostella vectensis]
          Length = 1022

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 24/127 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++++P AK    +    A   I+       VVK+   A G+             
Sbjct: 112 AKHFMSRHDIPTAKFASFTDADKACEHIRKADYAALVVKASGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S     I  + ++L   +     G  G   + + +E+  +       S+L    
Sbjct: 159 -GVVVASDKDEAIRAVHDMLKDNIF----GDAG---STIVIEEKLEGEE---FSVLAFTD 207

Query: 128 SGMVAFI 134
              +A +
Sbjct: 208 GKTIAAM 214


>gi|126696864|ref|YP_001091750.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           MIT 9301]
 gi|126543907|gb|ABO18149.1| phosphoribosylglycinamide synthetase [Prochlorococcus marinus str.
           MIT 9301]
          Length = 443

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 15/84 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++K N+P A    ++S+  A+  I +   P  VVK+   A G+             
Sbjct: 122 AKEFMQKANIPTANFWKVNSLEEAKKIINSSSIP-LVVKADGLASGK------------- 167

Query: 68  GGVRVESSLKSVISDIREILGSTL 91
            GV + +S          I     
Sbjct: 168 -GVFIPNSKDECFKAAESIFNGKF 190


>gi|110799753|ref|YP_696259.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Clostridium perfringens ATCC 13124]
 gi|110674400|gb|ABG83387.1| glutamate--cysteine ligase/gamma-glutamylcysteine synthetase
           [Clostridium perfringens ATCC 13124]
          Length = 778

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYDNIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFPGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|146299502|ref|YP_001194093.1| phosphoribosylglycinamide formyltransferase 2 [Flavobacterium
           johnsoniae UW101]
 gi|146153920|gb|ABQ04774.1| phosphoribosylglycinamide formyltransferase 2 [Flavobacterium
           johnsoniae UW101]
          Length = 385

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 30/132 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK    +S    + A+  +  P  VVK  + + G+G+           
Sbjct: 110 AKEL----GLRTAKYEYATSAEELQKAVLEIGIPC-VVKPLMSSSGKGQST--------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             ++ ES ++                   G  G  +  V VE   D   E  ++LL    
Sbjct: 156 --IKTESDIEKAWQYA-----------VAGSRGDVIE-VIVEAFVDFHSE--ITLLTITQ 199

Query: 128 SGMVAFIASTQG 139
           +       +  G
Sbjct: 200 NDNPTLFCAPIG 211


>gi|302526216|ref|ZP_07278558.1| acetyl/propionyl-CoA carboxylase alpha subunit [Streptomyces sp.
           AA4]
 gi|302435111|gb|EFL06927.1| acetyl/propionyl-CoA carboxylase alpha subunit [Streptomyces sp.
           AA4]
          Length = 1849

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 95/304 (31%), Gaps = 57/304 (18%)

Query: 8   AKALLRKYNVPVAK---GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK +  +  VPVA    G V  ++  A +A   +  P  ++K+    GGRG  +      
Sbjct: 153 AKLIAEEVGVPVAPWSGGEVA-TLEEALAAGDKIGYP-LMLKATAGGGGRGIRK------ 204

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V     L        +       +            V++E      R + + ++ 
Sbjct: 205 -----VESAGDLTEAYERTSQEALRAFGSGV----------VFLERLVTGARHVEVQVIS 249

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-----SEDVASLCDMLEL 179
           D  +           G+    V +    KI +    P++G             L   +  
Sbjct: 250 DGETAWAL-------GVRDCSVQRRNQ-KIIEESASPVLGADQTAELKASAERLAVAVGY 301

Query: 180 QGQARIDGGDLFPNLYK------AFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNA 232
           +G   ++       LY       AF + +  L   +P+  +  G  L  L   +     A
Sbjct: 302 RGACTVEF------LYHPGDRMFAFLEVNTRLQVEHPITEITTGTDLVRLQLHV-----A 350

Query: 233 LYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
               L+  +  +        + A+  +  +    G I  ++  AG  +     +      
Sbjct: 351 SGGKLEGAQPEESGHAVEARLNAEDPDRDFAPSPGRIARLLLPAGPGIRVDTGVSEGDTI 410

Query: 293 PANF 296
           PA+F
Sbjct: 411 PADF 414


>gi|255535159|ref|YP_003095530.1| Carbamoyl-phosphate synthase large chain [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341355|gb|ACU07468.1| Carbamoyl-phosphate synthase large chain [Flavobacteriaceae
           bacterium 3519-10]
          Length = 1060

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 15/41 (36%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L++  +P   G    +   A      +  P+ V  S +  G
Sbjct: 675 LQEMGIPQPLGKTCFTKEEALIIANEIGYPVLVRPSYVLGG 715


>gi|229579987|ref|YP_002838387.1| phosphoribosylglycinamide formyltransferase 2 [Sulfolobus
           islandicus Y.G.57.14]
 gi|228010703|gb|ACP46465.1| Phosphoribosylaminoimidazole carboxylase [Sulfolobus islandicus
           Y.G.57.14]
          Length = 397

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 26/163 (15%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P  K     +   A+ A K +  P  + K ++ + G G                + + +
Sbjct: 126 LPTTKYAFAENEEEAKHACKDIGFPCLI-KPEMSSSGHGHV--------------LVNKI 170

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
             V    RE              G RV    VE+   I  EL + L     S   + I  
Sbjct: 171 DDVEEAYRE------SVSHARGKGRRV---IVEEFVKIDTELTV-LTYRYYSNSGSIITK 220

Query: 137 TQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLE 178
           T   ++ +  +  Y +      +   +  T+      + + L 
Sbjct: 221 TIEPIEHKRPSYYYVESWHPSTVSREVKETARGIAQKVVEELG 263


>gi|189218381|ref|YP_001939022.1| Biotin carboxylase [Methylacidiphilum infernorum V4]
 gi|189185239|gb|ACD82424.1| Biotin carboxylase [Methylacidiphilum infernorum V4]
          Length = 458

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 85/270 (31%), Gaps = 38/270 (14%)

Query: 13  RKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           RK  VPV  G   V+ S   A      +  P+ ++K+    GGRG        +  +G V
Sbjct: 128 RKAGVPVVPGSEGVVESEKEALKISHQIGYPV-IIKAVAGGGGRGMRIAHNDVSLVQGFV 186

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGM 130
                  +   +  +  G                 +Y+E   +  R +   ++ D     
Sbjct: 187 -------AARLEAEKSFGDG--------------SIYIEKLIEDPRHVEFQIIADTKGK- 224

Query: 131 VAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQ-ARIDGG 188
                  +    ++   +   ++    ++DP L     +    L + ++ +G        
Sbjct: 225 --IFHVGERDCSVQRRNQKLVEESPSPVVDPILRKKMGKISVRLAESVDYEGVGTIEYLV 282

Query: 189 DLFPNLYKAFCDKDMSLLEINPLIIM-------KNGRLRVLDSKISFDDNALYRHLDIQE 241
           D F N Y  F + +  +   +P+          K   L      +  +   L       E
Sbjct: 283 DKFGNFY--FIEMNCRIQVEHPVTEEVYGVDLVKEQILVAAGYPLGKEWEELEPKKHAIE 340

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
            R  +E+  ++       + ++   G  G 
Sbjct: 341 FRINAEDGLQDFRPCAGKIDFLHFPGGPGI 370


>gi|145231034|ref|XP_001389781.1| urea carboxylase [Aspergillus niger CBS 513.88]
 gi|134055908|emb|CAK37386.1| unnamed protein product [Aspergillus niger]
          Length = 1238

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L  K  VP+  G   ++ S   A +  K L  P+ ++K+    GG G      L  +
Sbjct: 120 ARDLATKAGVPIVPGSKGLVKSEEEAVATAKELGFPV-MLKATAGGGGMGL-----LTCN 173

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
           ++  VR         + ++   G+              +  ++E
Sbjct: 174 TEKEVR------DAFATVKSRGGALFKNDGVFIERYYPSSHHIE 211


>gi|146302953|ref|YP_001190269.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera sedula DSM
           5348]
 gi|145701203|gb|ABP94345.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera sedula DSM
           5348]
          Length = 283

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           LLR   V V +  +  S   A      L  P+ V+K    + GR   R
Sbjct: 95  LLRSRGVAVPRTAIAFSRERALEIAGKLGYPV-VIKPIEGSWGRMVAR 141


>gi|70726314|ref|YP_253228.1| hypothetical protein SH1313 [Staphylococcus haemolyticus JCSC1435]
 gi|68447038|dbj|BAE04622.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 453

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 24/115 (20%)

Query: 14  KYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
              VPV  G    ++SV   +   + +  P+ V+K+         G   +     K   +
Sbjct: 124 DAGVPVIPGSKGAVNSVDEIKELAEEIGYPV-VLKA-------ASGGGGKGIRIVKEPEQ 175

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           +E SLK   S+ ++                    VYVE    + + + + ++ D 
Sbjct: 176 LEKSLKEAKSEGQKYFNDD--------------RVYVEAFIPVAKHVEVQIIGDG 216


>gi|46190807|ref|ZP_00120945.2| COG0027: Formate-dependent phosphoribosylglycinamide
           formyltransferase (GAR transformylase) [Bifidobacterium
           longum DJO10A]
 gi|189439722|ref|YP_001954803.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           longum DJO10A]
 gi|189428157|gb|ACD98305.1| Formate-dependent phosphoribosylglycinamide formyltransferase
           [Bifidobacterium longum DJO10A]
          Length = 445

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 158 GLPTTPYRFAGSLEELRAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 205

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 206 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCT 255

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 256 PIGQRQESGDYRESWQPATE 275


>gi|301169607|emb|CBW29208.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Haemophilus influenzae 10810]
          Length = 429

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVELALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV V  +L+     +R++L         G  G   + V +E+  D
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD 191


>gi|295702822|ref|YP_003595897.1| carbamoyl-phosphate synthase large subunit [Bacillus megaterium DSM
           319]
 gi|294800481|gb|ADF37547.1| carbamoyl-phosphate synthase, large subunit [Bacillus megaterium
           DSM 319]
          Length = 1036

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 71/216 (32%), Gaps = 47/216 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ + N PV +  V++ V  A +  K +  P+ V  +    G             + G
Sbjct: 133 RALMNELNEPVPESEVVTKVEEALAFAKKIGFPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    S++ +       L  + IT+             +E      +E+   ++ D  +
Sbjct: 180 GI--AHSMEELEKLSASGLRESAITQC-----------LIEKSIAGFKEVEYEVMRDVNN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDV-----ASLCDMLELQG 181
             +          ++E +          +++ P   +T     +       +   L + G
Sbjct: 227 TCITI-------CNMENIDPVGVHTGDSVVVAPSQTLTDVEYQMLRSASVKIISSLGIIG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I       +       K   L+E+NP +   + 
Sbjct: 280 GCNIQFALDPKS-------KQYYLIEVNPRVSRSSA 308


>gi|257455291|ref|ZP_05620526.1| phosphoribosylamine--glycine ligase [Enhydrobacter aerosaccus SK60]
 gi|257447253|gb|EEV22261.1| phosphoribosylamine--glycine ligase [Enhydrobacter aerosaccus SK60]
          Length = 434

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + K+++P AK    S    A + +K    P+ V+K+   A G+             
Sbjct: 108 AKDFMIKHHIPTAKYQTFSDAEQAIAYVKAEGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  S +  I  I ++L       + G  G   + V +E         ++ ++    
Sbjct: 154 -GVIVAMSEQEAIDAINDML----SGNKFGDAG---SRVVIEQFLQGEEASFICMIDGNH 205

Query: 128 SGMVAFIASTQGGMDIEE 145
              +  +A++Q    I E
Sbjct: 206 ---ILPMATSQDHKRIGE 220


>gi|253564519|ref|ZP_04841976.1| phosphoribosylamine-glycine ligase [Bacteroides sp. 3_2_5]
 gi|251948295|gb|EES88577.1| phosphoribosylamine-glycine ligase [Bacteroides sp. 3_2_5]
 gi|301161156|emb|CBW20694.1| putative phosphoribosylamine--glycine ligase [Bacteroides fragilis
           638R]
          Length = 424

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++++P A+   V   +++   + ++TL  P YV+K+     G+           
Sbjct: 110 AKEFMHRHHIPTARYQSVTADTLNEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G+    V +E+   
Sbjct: 158 ---GVLILPTLEEAKKELKEMLGGMF--------GNASATVVIEEFLS 194


>gi|238755725|ref|ZP_04617059.1| hypothetical protein yruck0001_6060 [Yersinia ruckeri ATCC 29473]
 gi|238706092|gb|EEP98475.1| hypothetical protein yruck0001_6060 [Yersinia ruckeri ATCC 29473]
          Length = 880

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 19/146 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLSTLPTWIASDSAEAVHIAEKIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A     +EL
Sbjct: 530 SHKSEVQGVMLYLRTALEVQRAADDILDRVKRTYPQA----RIHGLLVQSMAHRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIE 144
            +++  D   G +  +   +GG++  
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGVEWH 609


>gi|228935262|ref|ZP_04098088.1| Pyruvate carboxylase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228824427|gb|EEM70233.1| Pyruvate carboxylase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|228947666|ref|ZP_04109956.1| Pyruvate carboxylase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228812186|gb|EEM58517.1| Pyruvate carboxylase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|229123468|ref|ZP_04252667.1| Pyruvate carboxylase [Bacillus cereus 95/8201]
 gi|228659955|gb|EEL15596.1| Pyruvate carboxylase [Bacillus cereus 95/8201]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|227550571|ref|ZP_03980620.1| acetyl-CoA carboxylase [Enterococcus faecium TX1330]
 gi|257897026|ref|ZP_05676679.1| acetyl-CoA carboxylase [Enterococcus faecium Com12]
 gi|293378719|ref|ZP_06624877.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium PC4.1]
 gi|227180279|gb|EEI61251.1| acetyl-CoA carboxylase [Enterococcus faecium TX1330]
 gi|257833591|gb|EEV60012.1| acetyl-CoA carboxylase [Enterococcus faecium Com12]
 gi|292642647|gb|EFF60799.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Enterococcus
           faecium PC4.1]
          Length = 459

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           A+ L+++ NVPV  G   V+S+V  A      +  P+
Sbjct: 119 ARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPV 155


>gi|226306290|ref|YP_002766250.1| acetate--CoA ligase [Rhodococcus erythropolis PR4]
 gi|226185407|dbj|BAH33511.1| putative acetate--CoA ligase [Rhodococcus erythropolis PR4]
          Length = 901

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 23/68 (33%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A ALL  Y V V +   + S   A  A   +  P+ V  +      R       L    
Sbjct: 686 EAAALLECYGVAVVEFRSVLSEDEAVEAADAVGYPVAVKATGEMWRHRPDLGGVRLDLSG 745

Query: 67  KGGVRVES 74
              VR+  
Sbjct: 746 PESVRLAY 753


>gi|167633772|ref|ZP_02392096.1| pyruvate carboxylase [Bacillus anthracis str. A0442]
 gi|170688779|ref|ZP_02879983.1| pyruvate carboxylase [Bacillus anthracis str. A0465]
 gi|254683714|ref|ZP_05147574.1| pyruvate carboxylase [Bacillus anthracis str. CNEVA-9066]
 gi|254743950|ref|ZP_05201633.1| pyruvate carboxylase [Bacillus anthracis str. Kruger B]
 gi|167531178|gb|EDR93865.1| pyruvate carboxylase [Bacillus anthracis str. A0442]
 gi|170667295|gb|EDT18054.1| pyruvate carboxylase [Bacillus anthracis str. A0465]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|150004028|ref|YP_001298772.1| pyruvate carboxylase subunit A [Bacteroides vulgatus ATCC 8482]
 gi|254882916|ref|ZP_05255626.1| pyruvate carboxylase subunit A [Bacteroides sp. 4_3_47FAA]
 gi|319639722|ref|ZP_07994454.1| pyruvate carboxylase subunit A [Bacteroides sp. 3_1_40A]
 gi|149932452|gb|ABR39150.1| pyruvate carboxylase subunit A [Bacteroides vulgatus ATCC 8482]
 gi|254835709|gb|EET16018.1| pyruvate carboxylase subunit A [Bacteroides sp. 4_3_47FAA]
 gi|317388638|gb|EFV69485.1| pyruvate carboxylase subunit A [Bacteroides sp. 3_1_40A]
          Length = 503

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 36/197 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSAEEAVRICNEIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 172 HSEDEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNHGNVI-- 222

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 223 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRQEMGEKAVAAARAVNYSGAGTIE 275

Query: 193 NLYKAFCDKDMSLLEIN 209
            L     +++   LE+N
Sbjct: 276 FLVD--KNRNFYFLEMN 290


>gi|94967262|ref|YP_589310.1| phosphoribosylamine--glycine ligase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549312|gb|ABF39236.1| phosphoribosylamine--glycine ligase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 425

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++ +P     V++     + A+  L  P+ VVK+   A G+             
Sbjct: 106 AKLFMQRHRIPTGHYAVVTDKVELQKALAHLHAPV-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +         E+L      K  G  G RV    +E+      EL   ++ D  
Sbjct: 152 -GVVIAKTKDEAFLVAMEML----SGKMLGDAGRRV---VLEEFLQ-GEELSFLVMSDGE 202

Query: 128 SGMVAFIA 135
            G+    A
Sbjct: 203 RGVPLVAA 210


>gi|49478462|ref|YP_038009.1| pyruvate carboxylase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|49330018|gb|AAT60664.1| pyruvate carboxylase [Bacillus thuringiensis serovar konkukian str.
           97-27]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|55980482|ref|YP_143779.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Thermus
           thermophilus HB8]
 gi|55771895|dbj|BAD70336.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit (PurK)
           [Thermus thermophilus HB8]
          Length = 369

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 14/100 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K   +   VP      +      E  +K +  P  +                        
Sbjct: 101 KTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLK--------------TRRGGYDGK 146

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           G  +  + +  +  ++ + G  LI +   P    V+ + V
Sbjct: 147 GQALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAV 186


>gi|30264018|ref|NP_846395.1| pyruvate carboxylase [Bacillus anthracis str. Ames]
 gi|47529455|ref|YP_020804.1| pyruvate carboxylase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186857|ref|YP_030109.1| pyruvate carboxylase [Bacillus anthracis str. Sterne]
 gi|65321343|ref|ZP_00394302.1| COG1038: Pyruvate carboxylase [Bacillus anthracis str. A2012]
 gi|165872192|ref|ZP_02216831.1| pyruvate carboxylase [Bacillus anthracis str. A0488]
 gi|167641016|ref|ZP_02399273.1| pyruvate carboxylase [Bacillus anthracis str. A0193]
 gi|170705876|ref|ZP_02896339.1| pyruvate carboxylase [Bacillus anthracis str. A0389]
 gi|177654299|ref|ZP_02936228.1| pyruvate carboxylase [Bacillus anthracis str. A0174]
 gi|190566122|ref|ZP_03019041.1| pyruvate carboxylase [Bacillus anthracis Tsiankovskii-I]
 gi|227816721|ref|YP_002816730.1| pyruvate carboxylase [Bacillus anthracis str. CDC 684]
 gi|229601337|ref|YP_002868247.1| pyruvate carboxylase [Bacillus anthracis str. A0248]
 gi|254736059|ref|ZP_05193765.1| pyruvate carboxylase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254754271|ref|ZP_05206306.1| pyruvate carboxylase [Bacillus anthracis str. Vollum]
 gi|254758038|ref|ZP_05210065.1| pyruvate carboxylase [Bacillus anthracis str. Australia 94]
 gi|30258663|gb|AAP27881.1| pyruvate carboxylase [Bacillus anthracis str. Ames]
 gi|47504603|gb|AAT33279.1| pyruvate carboxylase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180784|gb|AAT56160.1| pyruvate carboxylase [Bacillus anthracis str. Sterne]
 gi|164712139|gb|EDR17677.1| pyruvate carboxylase [Bacillus anthracis str. A0488]
 gi|167511066|gb|EDR86455.1| pyruvate carboxylase [Bacillus anthracis str. A0193]
 gi|170129416|gb|EDS98280.1| pyruvate carboxylase [Bacillus anthracis str. A0389]
 gi|172080789|gb|EDT65870.1| pyruvate carboxylase [Bacillus anthracis str. A0174]
 gi|190563041|gb|EDV17007.1| pyruvate carboxylase [Bacillus anthracis Tsiankovskii-I]
 gi|227004854|gb|ACP14597.1| pyruvate carboxylase [Bacillus anthracis str. CDC 684]
 gi|229265745|gb|ACQ47382.1| pyruvate carboxylase [Bacillus anthracis str. A0248]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|319957728|ref|YP_004168991.1| acetyl-CoA carboxylase, biotin carboxylase [Nitratifractor
           salsuginis DSM 16511]
 gi|319420132|gb|ADV47242.1| acetyl-CoA carboxylase, biotin carboxylase [Nitratifractor
           salsuginis DSM 16511]
          Length = 446

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           AK ++ +  VP   G    +++   A+   K +  P+
Sbjct: 121 AKQVMAEAGVPTIPGSDGAVANAEEAKKLAKEIGYPV 157


>gi|228916584|ref|ZP_04080150.1| Pyruvate carboxylase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228843163|gb|EEM88245.1| Pyruvate carboxylase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|261379623|ref|ZP_05984196.1| phosphoribosylamine--glycine ligase [Neisseria subflava NJ9703]
 gi|284798107|gb|EFC53454.1| phosphoribosylamine--glycine ligase [Neisseria subflava NJ9703]
          Length = 423

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KY +P A+     +  AA   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYKIPTAQYQTFENADAAHDYVNRKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 182


>gi|255099179|ref|ZP_05328156.1| pyruvate carboxylase [Clostridium difficile QCD-63q42]
          Length = 1143

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K + ++ NV    GV   I S   A+     +  P+ ++K+    GGRG
Sbjct: 123 SKKIAKEVNVQTIPGVEKAIRSTEEAKEVANKIGYPV-MIKASNGGGGRG 171


>gi|196035904|ref|ZP_03103306.1| pyruvate carboxylase [Bacillus cereus W]
 gi|195991553|gb|EDX55519.1| pyruvate carboxylase [Bacillus cereus W]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|218905078|ref|YP_002452912.1| pyruvate carboxylase [Bacillus cereus AH820]
 gi|218537792|gb|ACK90190.1| pyruvate carboxylase [Bacillus cereus AH820]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|157737613|ref|YP_001490296.1| carbamoyl phosphate synthase large subunit [Arcobacter butzleri
           RM4018]
 gi|157699467|gb|ABV67627.1| carbamoylphosphate synthase, large subunit [Arcobacter butzleri
           RM4018]
          Length = 1081

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           ++K  + + K     ++  A    K +  P+    S   AGG     +            
Sbjct: 134 MKKIGMDLPKSANAYTLEEAIKVAKEIGFPVISRASFTLAGGGSGVAYNMEEFKVLAASG 193

Query: 72  VESSLKSVISDIREILG 88
           +E+S  + I  +  +LG
Sbjct: 194 IEASPINEIEIMESMLG 210


>gi|126697587|ref|YP_001086484.1| pyruvate carboxylase [Clostridium difficile 630]
 gi|254973672|ref|ZP_05270144.1| pyruvate carboxylase [Clostridium difficile QCD-66c26]
 gi|255091064|ref|ZP_05320542.1| pyruvate carboxylase [Clostridium difficile CIP 107932]
 gi|255304962|ref|ZP_05349134.1| pyruvate carboxylase [Clostridium difficile ATCC 43255]
 gi|255312717|ref|ZP_05354300.1| pyruvate carboxylase [Clostridium difficile QCD-76w55]
 gi|255515477|ref|ZP_05383153.1| pyruvate carboxylase [Clostridium difficile QCD-97b34]
 gi|255648570|ref|ZP_05395472.1| pyruvate carboxylase [Clostridium difficile QCD-37x79]
 gi|260681790|ref|YP_003213075.1| pyruvate carboxylase [Clostridium difficile CD196]
 gi|260685387|ref|YP_003216520.1| pyruvate carboxylase [Clostridium difficile R20291]
 gi|306518700|ref|ZP_07405047.1| pyruvate carboxylase [Clostridium difficile QCD-32g58]
 gi|115249024|emb|CAJ66835.1| Pyruvate carboxylase [Clostridium difficile]
 gi|260207953|emb|CBA60079.1| pyruvate carboxylase [Clostridium difficile CD196]
 gi|260211403|emb|CBE01480.1| pyruvate carboxylase [Clostridium difficile R20291]
          Length = 1143

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K + ++ NV    GV   I S   A+     +  P+ ++K+    GGRG
Sbjct: 123 SKKIAKEVNVQTIPGVEKAIRSTEEAKEVANKIGYPV-MIKASNGGGGRG 171


>gi|18310555|ref|NP_562489.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Clostridium perfringens str. 13]
 gi|22653734|sp|Q8XK30|GSHAB_CLOPE RecName: Full=Glutathione biosynthesis bifunctional protein gshAB;
           AltName: Full=Gamma-GCS-GS; Short=GCS-GS; Includes:
           RecName: Full=Glutamate--cysteine ligase; AltName:
           Full=Gamma-ECS; Short=GCS; AltName:
           Full=Gamma-glutamylcysteine synthetase; Includes:
           RecName: Full=Glutathione synthetase; AltName: Full=GSH
           synthetase; Short=GS; Short=GSH-S; Short=GSHase;
           AltName: Full=Glutathione synthase
 gi|18145236|dbj|BAB81279.1| probable glutamate-cysteine ligase [Clostridium perfringens str.
           13]
          Length = 778

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYDNIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFPGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|84496501|ref|ZP_00995355.1| cyanophycin synthetase [Janibacter sp. HTCC2649]
 gi|84383269|gb|EAP99150.1| cyanophycin synthetase [Janibacter sp. HTCC2649]
          Length = 972

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +PV K   +     A +A + +  P+ V+K      GRG
Sbjct: 237 RLLGSAGLPVPKQETVRGPEDAVAAARRIGFPV-VLKPLDGNHGRG 281


>gi|107103954|ref|ZP_01367872.1| hypothetical protein PaerPA_01005025 [Pseudomonas aeruginosa PACS2]
 gi|254238423|ref|ZP_04931746.1| phosphoribosylamine-glycine ligase [Pseudomonas aeruginosa C3719]
 gi|126170354|gb|EAZ55865.1| phosphoribosylamine-glycine ligase [Pseudomonas aeruginosa C3719]
          Length = 429

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHRIPTAAYRNFTEVEPALAYLREQGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMNLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|294790943|ref|ZP_06756101.1| carbamoyl-phosphate synthase, large subunit [Scardovia inopinata
           F0304]
 gi|294458840|gb|EFG27193.1| carbamoyl-phosphate synthase, large subunit [Scardovia inopinata
           F0304]
          Length = 1071

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 21/115 (18%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           HE++    L++  +P  +G    +V  A      +  P+ V  S +  G           
Sbjct: 668 HEFETA--LQELGIPQPQGDTAVTVDQALVIANQIGYPVLVRPSYVLGG----------- 714

Query: 64  ADSKGGVRVESSLKSVI----SDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
                 + +  +   +     + ++EI     I       G  +    + DG ++
Sbjct: 715 ----RAMEIVHNDDELKVYMSTAVKEISHDAPILVDRYVVGKELETDAIADGENV 765


>gi|254721549|ref|ZP_05183338.1| pyruvate carboxylase [Bacillus anthracis str. A1055]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|229186187|ref|ZP_04313356.1| Pyruvate carboxylase [Bacillus cereus BGSC 6E1]
 gi|228597363|gb|EEK55014.1| Pyruvate carboxylase [Bacillus cereus BGSC 6E1]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|227820090|ref|YP_002824061.1| LacI family transcriptional regulator [Sinorhizobium fredii NGR234]
 gi|227339089|gb|ACP23308.1| putative LacI family transcriptional regulator [Sinorhizobium
           fredii NGR234]
          Length = 340

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 12/76 (15%)

Query: 328 IFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLD-- 385
           IF G    D + +G++ A++E  + +P  + + G +      ++AE     +T +D++  
Sbjct: 244 IFCG---NDQIARGVIDALRERGVKVPDDVSVIGFDN---WEILAEQTRPPLTTVDMNLK 297

Query: 386 ----DAAQKIVHAVKG 397
               +A   ++   +G
Sbjct: 298 ELGREAGLMVLALAEG 313


>gi|225865929|ref|YP_002751307.1| pyruvate carboxylase [Bacillus cereus 03BB102]
 gi|225786784|gb|ACO27001.1| pyruvate carboxylase [Bacillus cereus 03BB102]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|196045771|ref|ZP_03113000.1| pyruvate carboxylase [Bacillus cereus 03BB108]
 gi|196023211|gb|EDX61889.1| pyruvate carboxylase [Bacillus cereus 03BB108]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|196038856|ref|ZP_03106164.1| pyruvate carboxylase [Bacillus cereus NVH0597-99]
 gi|301055438|ref|YP_003793649.1| pyruvate carboxylase [Bacillus anthracis CI]
 gi|196030579|gb|EDX69178.1| pyruvate carboxylase [Bacillus cereus NVH0597-99]
 gi|300377607|gb|ADK06511.1| pyruvate carboxylase [Bacillus cereus biovar anthracis str. CI]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|118479164|ref|YP_896315.1| pyruvate carboxylase [Bacillus thuringiensis str. Al Hakam]
 gi|229092996|ref|ZP_04224127.1| Pyruvate carboxylase [Bacillus cereus Rock3-42]
 gi|118418389|gb|ABK86808.1| pyruvate carboxylase [Bacillus thuringiensis str. Al Hakam]
 gi|228690367|gb|EEL44153.1| Pyruvate carboxylase [Bacillus cereus Rock3-42]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   +   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVKEFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|255535504|ref|YP_003095875.1| cyanophycin synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341700|gb|ACU07813.1| Cyanophycin synthase [Flavobacteriaceae bacterium 3519-10]
          Length = 876

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    +PV  G +++     E  I+ +  P+ V+K     G  GKG    +      
Sbjct: 221 KKMLDDNAIPVPMGDLVTEPEELERVIRKIGYPI-VLKP--LDGNHGKGSSINVNDYESA 277

Query: 69  GVRVESS 75
            + ++ +
Sbjct: 278 LIGLQHA 284


>gi|113866940|ref|YP_725429.1| phosphoribosylamine--glycine ligase [Ralstonia eutropha H16]
 gi|113525716|emb|CAJ92061.1| Phosphoribosylamine-glycine ligase [Ralstonia eutropha H16]
          Length = 422

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 82/225 (36%), Gaps = 29/225 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P A     S    A + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMERHGIPTAAYQTFSDATQAHAYIDAQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+   + +       L   + G  G+RV    +E+  D   E    +LVD  
Sbjct: 152 -GVVVAMSLEEAHTAVD----MMLADNKLGDAGARV---VIEEFLD-GEEASFIVLVDGK 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCD-MLELQGQARI 185
           +  V  +A++Q    + +     P         P   VT      +L + +L        
Sbjct: 203 N--VLALATSQDHKRLLDADAG-PNTGGMGAYSPAPVVTPALHARALREIILPTVRGMEK 259

Query: 186 DGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           DG      LY     DKD +L  +     M +   + + +++  D
Sbjct: 260 DGIPYTGFLYAGLMIDKDGNLKTLEFNCRMGDPETQPILARLKTD 304


>gi|46198445|ref|YP_004112.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Thermus
           thermophilus HB27]
 gi|46196067|gb|AAS80485.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Thermus
           thermophilus HB27]
          Length = 369

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 14/100 (14%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K   +   VP      +      E  +K +  P  +                        
Sbjct: 101 KTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLK--------------TRRGGYDGK 146

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYV 108
           G  +  + +  +  ++ + G  LI +   P    V+ + V
Sbjct: 147 GQALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAV 186


>gi|145220406|ref|YP_001131115.1| acetyl-CoA carboxylase, biotin carboxylase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206570|gb|ABP37613.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 446

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+ +    VPV  G   +++ +  A    K    P+ ++K     GG+G     E    
Sbjct: 119 AKSTMIAAGVPVVPGSPGLVTDLKEAVETAKKTGYPV-IIKPTAGGGGKGMRVVHEESQI 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            K        L +  S+  +  G+              + VY+E   +  R + + ++ D
Sbjct: 178 EKA-------LNTARSEAEQAFGN--------------SGVYIEKFLENPRHVEIQIMSD 216

Query: 126 RTSGMV 131
           +    +
Sbjct: 217 QHGNTI 222


>gi|332995675|gb|AEF05730.1| phosphoribosylamine-glycine ligase [Alteromonas sp. SN2]
          Length = 437

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 23/123 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAEYQNFTEIDPAIAYVREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     IR++L         G  G   + V VE+  D   E    ++VD  S
Sbjct: 154 GVIVAMTLQEAEDAIRDMLA----GNAFGEAG---SRVVVEEFLD-GEEASFIVMVDGKS 205

Query: 129 GMV 131
            + 
Sbjct: 206 VLP 208


>gi|325957370|ref|YP_004292782.1| biotin carboxylase [Lactobacillus acidophilus 30SC]
 gi|325333935|gb|ADZ07843.1| biotin carboxylase [Lactobacillus acidophilus 30SC]
          Length = 460

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 5   EYQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           E+ A+ L+  + VPV  G    I     A+     +  P+ 
Sbjct: 117 EH-ARQLMMAHGVPVTPGSKDFIKDADEAKKIAAKVGYPVL 156


>gi|319951668|ref|YP_004162935.1| carbamoyl-phosphate synthase, large subunit [Cellulophaga algicola
           DSM 14237]
 gi|319420328|gb|ADV47437.1| carbamoyl-phosphate synthase, large subunit [Cellulophaga algicola
           DSM 14237]
          Length = 950

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 19/109 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L++ N+P  +  V  +   A +    L  PL +  S +  G                G
Sbjct: 689 KMLQENNIPFPQFGVAETAEEALALSDELDFPLLIRPSYVLGG---------------QG 733

Query: 70  VRVESSLKSVISDI----REILGSTLITKQTGPTGSRVNCVYVEDGADI 114
           +++  + + +   +    ++I G+ L+               + DG D+
Sbjct: 734 MKIVINRQELEEHVINLLKQIPGNKLLLDHYLDGAIEAEADAICDGEDV 782


>gi|319794555|ref|YP_004156195.1| CoA-binding domain protein [Variovorax paradoxus EPS]
 gi|315597018|gb|ADU38084.1| CoA-binding domain protein [Variovorax paradoxus EPS]
          Length = 706

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 79/239 (33%), Gaps = 36/239 (15%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E +AK L  ++ VP  +  ++ +   A +A + L     V+K             +  
Sbjct: 488 LNEAEAKNLFARFGVPCVRERIVGNAEEAVAAARELGTGKVVLKI---------LSSEIT 538

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV V  +   V   +  +       + +   G R     V++  +   EL L  
Sbjct: 539 HKSDVGGVAVGIAADRVGERLERM-----AAEVSERAGVRPAQFLVQEMVEGGVELILGC 593

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML----- 177
             D     V       GG+  E +     + +      P  G++ ++  SL   L     
Sbjct: 594 HRDPLGSAVLL---GMGGVTAELLKDTALRMV------PPGGLSRDEALSLVRELRTWPL 644

Query: 178 --ELQGQARIDGGDLFPNLYKAFCDKDM-----SLLEINPLIIMKNGR-LRVLDSKISF 228
               +G+   D   L   +       D         EINP+ ++  G  +R  D     
Sbjct: 645 LDGFRGRKLADVDALVSAIVAFSRMIDALGERLVEAEINPVFVLPKGEGVRAADGVAVL 703


>gi|296188909|ref|XP_002742551.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           isoform 2 [Callithrix jacchus]
          Length = 702

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 153 ESKLLAKKAKVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 197

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 198 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 250

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 251 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALAKAVKYSSAG 307

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            I+   D   N Y  F + +  L   +P+     G
Sbjct: 308 TIEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 340


>gi|223934510|ref|ZP_03626431.1| urea carboxylase [bacterium Ellin514]
 gi|223896973|gb|EEF63413.1| urea carboxylase [bacterium Ellin514]
          Length = 1201

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 70/213 (32%), Gaps = 32/213 (15%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L  + NVP+  G  ++SSV  A      +  P+                 K    
Sbjct: 115 HRARELAGECNVPLLPGTQLLSSVDEAVQRASGIGYPVM---------------LKSTAG 159

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+RV ++   +      +  + L        G     +++E      R + + +  
Sbjct: 160 GGGIGMRVCNNEADLREHFDSV--TRLSQTNFKNGG-----LFLEKFVRHARHIEVQIFG 212

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D        +A  +    ++   +   ++     + P +    E + +    L    + +
Sbjct: 213 DGQGR---VLALGERDCSLQRRNQKVVEETPAPNLPPEV---REQLFACARRLG--ERVK 264

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                    +Y A        LE+N  + +++G
Sbjct: 265 YRSAGTVEFVYDA-EAGAFYFLEVNTRLQVEHG 296


>gi|50302215|ref|XP_451041.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640172|emb|CAH02629.1| KLLA0A00957p [Kluyveromyces lactis]
          Length = 792

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++K+N+P A+        AA++ ++ +   + V+K+   A G+             
Sbjct: 113 SKDFMQKHNIPTARYANFDDYEAAKAYLEKVDYQV-VLKADGIAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + ++ +     ++ I    ++ +Q G  G     V +E+  +
Sbjct: 159 -GVLIPTTQEEAQEALKII----MVERQFGDAGK---SVVIEEFLE 196


>gi|9957024|gb|AAG09178.1| purine biosynthetic pathway protein ADE5,7 [Kluyveromyces lactis]
          Length = 792

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++K+N+P A+        AA++ ++ +   + V+K+   A G+             
Sbjct: 113 SKDFMQKHNIPTARYANFDDYEAAKAYLEKVDYQV-VLKADGIAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + ++ +     ++ I    ++ +Q G  G     V +E+  +
Sbjct: 159 -GVLIPTTQEEAQEALKII----MVERQFGDAGK---SVVIEEFLE 196


>gi|1076013|pir||A49930 carB protein homolog - Mycobacterium bovis (strain BCG)  (fragment)
          Length = 496

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +  +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 146 AERGLPAPKYGTATTFAQARRIAEEIGYPVLVRPSYVL-GGRG 187


>gi|330973005|gb|EGH73071.1| Urea amidolyase-related protein [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 762

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL +++ VP+ +G  ++ S+ +A +A +T+  P+                 K      
Sbjct: 119 ARALAKQHGVPMLEGTELLDSLESAIAAARTIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   +         
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPYGMAEELCAAAVKLARAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|318057066|ref|ZP_07975789.1| carbamoyl phosphate synthase large subunit [Streptomyces sp.
           SA3_actG]
 gi|318078631|ref|ZP_07985963.1| carbamoyl phosphate synthase large subunit [Streptomyces sp.
           SA3_actF]
          Length = 1104

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A+     +  P+ V  S +  GGRG
Sbjct: 683 RVLAEAGLPAPKHGTATTFAGAKDIADEIGYPVLVRPSYVL-GGRG 727


>gi|319638766|ref|ZP_07993525.1| phosphoribosylamine-glycine ligase [Neisseria mucosa C102]
 gi|317400007|gb|EFV80669.1| phosphoribosylamine-glycine ligase [Neisseria mucosa C102]
          Length = 423

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +   A   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYNIPTAQYQTFENADVAHDYVNRKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAGARV 182


>gi|229491257|ref|ZP_04385083.1| CoA-binding domain protein [Rhodococcus erythropolis SK121]
 gi|229321796|gb|EEN87591.1| CoA-binding domain protein [Rhodococcus erythropolis SK121]
          Length = 734

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 23/68 (33%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A ALL  Y V V +   + S   A  A   +  P+ V  +      R       L    
Sbjct: 519 EAAALLECYGVAVVEFRSVLSEDEAVEAADAVGYPVAVKATGEMWRHRPDLGGVRLDLSG 578

Query: 67  KGGVRVES 74
              VR+  
Sbjct: 579 PESVRLAY 586


>gi|223939548|ref|ZP_03631424.1| phosphoribosylamine/glycine ligase [bacterium Ellin514]
 gi|223891820|gb|EEF58305.1| phosphoribosylamine/glycine ligase [bacterium Ellin514]
          Length = 430

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           ++  + KY +P AK    S+V  A+   ++L G   V K+   A G+             
Sbjct: 114 SQDFMEKYGIPTAKAGTFSNVAMAKGFAESLGGRCAV-KADGLALGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV + SS       I EIL    + K  G  G++V
Sbjct: 160 -GVLICSSTAEANRAIDEIL----VNKAFGIAGAKV 190


>gi|254526583|ref|ZP_05138635.1| acetyl-CoA carboxylase, biotin carboxylase [Prochlorococcus marinus
           str. MIT 9202]
 gi|221538007|gb|EEE40460.1| acetyl-CoA carboxylase, biotin carboxylase [Prochlorococcus marinus
           str. MIT 9202]
          Length = 449

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +    VP   G   ++S++  A      +  P+ ++K+    GGRG  R  E   +
Sbjct: 119 AKETMEAVGVPTVPGSKGLLSNIDEAYKLADDIGYPV-IIKATAGGGGRGM-RLVENSDN 176

Query: 66  SKGGVRVESSLKSVI 80
            +   +         
Sbjct: 177 LEKMFKAAQGEAEAA 191


>gi|251796501|ref|YP_003011232.1| phosphoribosylglycinamide formyltransferase 2 [Paenibacillus sp.
           JDR-2]
 gi|247544127|gb|ACT01146.1| phosphoribosylglycinamide formyltransferase 2 [Paenibacillus sp.
           JDR-2]
          Length = 392

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 29/157 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P A      S+   ++A+K +  P  V+K  + + G+G+         ++  +    +
Sbjct: 124 GLPTAPYQFADSLDELKAAVKEIGLPC-VIKPIMSSSGKGQS-----VCKTEADIESCWN 177

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-I 134
                   ++                    + VE       E+ L  +   +       I
Sbjct: 178 YAMEGGRAKKA------------------RIIVEGFVTFESEITLLTIRSVSGTSFCAPI 219

Query: 135 ASTQGGMDIEEVA---KDYPQKIFKLLIDPLIGVTSE 168
              Q   D  E        P++I K   D  + +T E
Sbjct: 220 GHVQKDGDYIESWQPHHMTPEQI-KQAEDIALRITDE 255


>gi|164511458|emb|CAN89659.1| putative pyridoxal-phosphate dependent enzyme [Streptomyces
           collinus]
          Length = 757

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 19/105 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +ALLR+  V   +  V+       +A+     P  V               K        
Sbjct: 458 RALLRRAGVHQPRYAVVREPGEVAAAVARTGLPCVV---------------KPADDSGSV 502

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            V + +      +    IL  T   +           V VE+  D
Sbjct: 503 NVLLCTDEAQARAQAERILAVTTNVRGMPTA----RTVLVEEYLD 543


>gi|157412411|ref|YP_001483277.1| acetyl-CoA carboxylase biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9215]
 gi|157386986|gb|ABV49691.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Prochlorococcus
           marinus str. MIT 9215]
          Length = 449

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +    VP   G   ++S++  A      +  P+ ++K+    GGRG  R  E   +
Sbjct: 119 AKETMEAVGVPTVPGSKGLLSNIDEAYKLADDIGYPV-IIKATAGGGGRGM-RLVENSDN 176

Query: 66  SKGGVRVESSLKSVI 80
            +   +         
Sbjct: 177 LEKMFKAAQGEAEAA 191


>gi|153005093|ref|YP_001379418.1| alpha-L-glutamate ligase [Anaeromyxobacter sp. Fw109-5]
 gi|152028666|gb|ABS26434.1| alpha-L-glutamate ligase, RimK family [Anaeromyxobacter sp.
           Fw109-5]
          Length = 324

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 18/103 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL    V V + V+ S     +  ++ + G   +VK               L  + K G
Sbjct: 117 QLLAASGVRVPRTVMASDPSRLKEMVRVVGGVPVLVK--------------LLAVNEKSG 162

Query: 70  VRVESSLKSVISDIREI--LGSTLITKQT--GPTGSRVNCVYV 108
           V +  SL+S+ + +  I  LG  ++ +Q   G  G  +  + V
Sbjct: 163 VMICESLQSLEAALEAILGLGQNIVVQQYLRGAKGRDLRVLVV 205


>gi|303249381|ref|ZP_07335607.1| D-alanine/D-alanine ligase [Desulfovibrio fructosovorans JJ]
 gi|302489219|gb|EFL49184.1| D-alanine/D-alanine ligase [Desulfovibrio fructosovorans JJ]
          Length = 306

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 68/222 (30%), Gaps = 43/222 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L   + +P  +   + +   A  A    P P +V               K     S 
Sbjct: 99  SKQLFISHGLPTPRWDFLPTPPPAGYA-PAFPPPWFV---------------KPNSGGSS 142

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
             + +      + + + +I  +              +   +E+G     EL  ++L D  
Sbjct: 143 VYMSLVRDPAELPAALEKIFATG-------------DAALIEEGLCGGMELTCAVLGD-- 187

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKL-LIDPLIGVTSEDVA---SLCDMLELQGQA 183
             +   +   + G   +  +K  P+   ++        +T E      +    L L G +
Sbjct: 188 EALPPILIRPKAGEFFDYASKYQPEAADEICPAPIPRALTDELGRLSLAAHAALGLTGYS 247

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSK 225
           R D                + LLE+N L  M    L    ++
Sbjct: 248 RADFIHT--------DKHGLMLLEVNTLPGMTPTSLLPRSAR 281


>gi|227542174|ref|ZP_03972223.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227182003|gb|EEI62975.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 1124

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L+   +P       +S   A++  + +  P+ V  S +  GGRG
Sbjct: 698 LKHAQLPAPAFGTATSFEEAKAVAENIGYPVLVRPSYVL-GGRG 740


>gi|227488830|ref|ZP_03919146.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227091252|gb|EEI26564.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 1124

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L+   +P       +S   A++  + +  P+ V  S +  GGRG
Sbjct: 698 LKHAQLPAPAFGTATSFEEAKAVAENIGYPVLVRPSYVL-GGRG 740


>gi|255654105|ref|ZP_05399514.1| pyruvate carboxylase [Clostridium difficile QCD-23m63]
 gi|296449856|ref|ZP_06891623.1| pyruvate carboxylase [Clostridium difficile NAP08]
 gi|296877920|ref|ZP_06901940.1| pyruvate carboxylase [Clostridium difficile NAP07]
 gi|296261343|gb|EFH08171.1| pyruvate carboxylase [Clostridium difficile NAP08]
 gi|296431117|gb|EFH16944.1| pyruvate carboxylase [Clostridium difficile NAP07]
          Length = 1143

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K + ++ NV    GV   I S   A+     +  P+ ++K+    GGRG
Sbjct: 123 SKKIAKEVNVQTIPGVEKAIRSTEEAKEVANKIGYPV-MIKASNGGGGRG 171


>gi|222099199|ref|YP_002533767.1| Phosphoribosylaminoimidazole carboxylase [Thermotoga neapolitana
           DSM 4359]
 gi|221571589|gb|ACM22401.1| Phosphoribosylaminoimidazole carboxylase [Thermotoga neapolitana
           DSM 4359]
          Length = 380

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 42/106 (39%), Gaps = 4/106 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  LRK  +PV +  ++  +    + ++    P+ V K++            +   D + 
Sbjct: 105 KEFLRKKGIPVPRYKLVRDLE---NDVRDFGFPV-VQKARKGGYDGRGVFIIKNEKDLEN 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            +  E+ L+  +   +E+       ++       V  +Y ++ A+I
Sbjct: 161 ALSGETYLEEFVEIEKELAVMVARNEKGEIACYPVVEMYFDEDANI 206


>gi|222097395|ref|YP_002531452.1| pyruvate carboxylase [Bacillus cereus Q1]
 gi|229198063|ref|ZP_04324775.1| Pyruvate carboxylase [Bacillus cereus m1293]
 gi|221241453|gb|ACM14163.1| pyruvate carboxylase [Bacillus cereus Q1]
 gi|228585421|gb|EEK43527.1| Pyruvate carboxylase [Bacillus cereus m1293]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    + S+   E   +    P+ ++K+ +  GGRG    +           +  
Sbjct: 134 IPVIPGSDGPVDSLEEVEKFAEKYDYPI-IIKASLGGGGRGMRIVRTSE-------ELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +CD   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICDAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K   D +   +E+NP + ++
Sbjct: 283 LVK---DDNFYFIEVNPRVQVE 301


>gi|146278337|ref|YP_001168496.1| carbamoyl-phosphate synthase L chain, ATP-binding [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145556578|gb|ABP71191.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 666

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L ++  V    G   +I+    A      +  P+ +  S                  
Sbjct: 119 SKKLAKEAGVSTVPGYMGLIADADEAVKISDEIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + +               +K         + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWNAQEAREGFE-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
           +    V      +    I+   +   ++     +D        E   +L   +       
Sbjct: 217 KHGNCVYL---HERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQAVALAKAVGYASAGT 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D   N Y  F + +  L   +P+  +  G
Sbjct: 274 VEFIVDGQKNFY--FLEMNTRLQVEHPVTELITG 305


>gi|118580936|ref|YP_902186.1| carbamoyl-phosphate synthase, large subunit [Pelobacter propionicus
            DSM 2379]
 gi|118503646|gb|ABL00129.1| carbamoyl-phosphate synthase large subunit [Pelobacter propionicus
            DSM 2379]
          Length = 1078

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 71/416 (17%), Positives = 133/416 (31%), Gaps = 91/416 (21%)

Query: 20   AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSV 79
             +  +  S   AE A + +  P+ V  S +  GGR                        +
Sbjct: 696  PENGIARSFEEAEKAAERIGYPVVVRPSYVL-GGRAM---------------------EI 733

Query: 80   ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQG 139
            + D+  +        Q  P     + + ++   D   E+ +  L D T  ++       G
Sbjct: 734  VYDVDNLRRYMTTAVQASPE----HPILIDKFLDEAIEIDVDALCDGTEVVI-------G 782

Query: 140  GM--DIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA 197
            G+   IEE           L   P   ++ E VA +     L             N+  A
Sbjct: 783  GIMEHIEEAGIHSGDSACSL---PPYSISPEMVAEIRRQTSLMALELN--VKGLMNVQYA 837

Query: 198  FCDKDMSLLEIN-------PLIIMKNGRLRV-LDSKISFDDNALYRHLDIQELRDVSEED 249
              D  + +LE+N       P +    GR    + ++I            ++EL    +  
Sbjct: 838  IKDGRVYILEVNPRASRTAPFVSKATGRPLAKIAARIMAG-------KSLKELGVSGDIV 890

Query: 250  SREIEAKQHNLSYIALDGNIGCM---------VNGAGLAMATMDIIKLYGGAP-----AN 295
             R +  K+    ++   G    +         V G G + A        G         N
Sbjct: 891  PRHVSVKEAVFPFVKFPGVDTLLGPEMKSTGEVMGIGDSFADAFAKAQLGANVRLPLKGN 950

Query: 296  FLDVGGGADQDKV--------AAAFKIITSDSSV-----KGILINIFGGIMRCDVLVKG- 341
                   AD+  V         A F I+ +D +      KGI +       R + +++G 
Sbjct: 951  AFISVRNADKKHVVTAAEKLYKAGFGILATDGTASYLAEKGIPV------KRINKVLEGR 1004

Query: 342  --ILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
              ++ A+K  +IN+ +        V     +  E+ ++ I        A+ +V ++
Sbjct: 1005 PHVVDAIKNGEINLVINTTQGAQAVVDSFSIRREALMHNIAYYTTVAGAKAVVDSI 1060


>gi|218529225|ref|YP_002420041.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium
           chloromethanicum CM4]
 gi|240137593|ref|YP_002962064.1| acetyl CoA carboxylase, biotin carboxylase subunit
           [Methylobacterium extorquens AM1]
 gi|254560065|ref|YP_003067160.1| acetyl CoA carboxylase, biotin carboxylase subunit
           [Methylobacterium extorquens DM4]
 gi|218521528|gb|ACK82113.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium
           chloromethanicum CM4]
 gi|240007561|gb|ACS38787.1| acetyl CoA carboxylase, biotin carboxylase subunit
           [Methylobacterium extorquens AM1]
 gi|254267343|emb|CAX23175.1| acetyl CoA carboxylase, biotin carboxylase subunit
           [Methylobacterium extorquens DM4]
          Length = 455

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 11/113 (9%)

Query: 7   QAKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +P V   +G V      A+     +  P+ V K+    GGRG    +   
Sbjct: 118 EAKRTAKRLGIPCVPGSEGGVTD-PDEAKRVAAEIGYPVLV-KAASGGGGRGMKVARSES 175

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTL-----ITKQTGPTGSRVNCVYVEDG 111
              +      +  K+   D    L   L     I  Q    G   + V++ + 
Sbjct: 176 ELEQALDMARTEAKAAFGDDAVYLEKYLTKPRHIEVQILGDGKG-HAVHLAER 227


>gi|197301636|ref|ZP_03166709.1| hypothetical protein RUMLAC_00363 [Ruminococcus lactaris ATCC
           29176]
 gi|197299366|gb|EDY33893.1| hypothetical protein RUMLAC_00363 [Ruminococcus lactaris ATCC
           29176]
          Length = 424

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A     +   AA + ++    P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYHIPTAAYENFTDPDAAIAYLENAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +   L+   + ++EI    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICQDLEEAKAGVKEI----MLDKKFGSAG---NEMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKTMTSAQD 212


>gi|148241440|ref|YP_001226597.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. RCC307]
 gi|147849750|emb|CAK27244.1| Biotin carboxylase (A subunit of acetyl-CoA carboxylase)
           [Synechococcus sp. RCC307]
          Length = 449

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 65/183 (35%), Gaps = 28/183 (15%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +++  VP   G   +++SV  A     ++  P+ ++K+    GGR           
Sbjct: 120 AKATMQRVGVPTIPGSEGLLASVDEAARLAGSMGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   + +     L      +     G+    +Y+E      R + + +L D
Sbjct: 168 ---GMRLVRSADELEN-----LFKAAQGEAEAAFGNP--GLYMEKFITRPRHVEVQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +DP       E   +    +  +G   
Sbjct: 218 RFGN---VVHLGERDCSIQRRHQKLLEEAPSPGLDPETRRRMGEAAVAAAKTIGYEGAGT 274

Query: 185 IDG 187
           ++ 
Sbjct: 275 VEF 277


>gi|58038797|ref|YP_190761.1| carbamoyl phosphate synthase large subunit [Gluconobacter oxydans
           621H]
 gi|58001211|gb|AAW60105.1| Carbamoyl-phosphate synthase large chain [Gluconobacter oxydans
           621H]
          Length = 1084

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +QA   LRK  +   +  +  S   AE   + +  P+    S +  G
Sbjct: 683 FQAM--LRKLGLRQPRNGIARSPAEAEKIAEEVGYPVVARPSYVLGG 727


>gi|147672312|ref|YP_001215356.1| hypothetical protein VC0395_0517 [Vibrio cholerae O395]
 gi|262168427|ref|ZP_06036123.1| protein acetyltransferase [Vibrio cholerae RC27]
 gi|146314695|gb|ABQ19235.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227015366|gb|ACP11575.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|262022956|gb|EEY41661.1| protein acetyltransferase [Vibrio cholerae RC27]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPIDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|296117974|ref|ZP_06836557.1| carbamoyl-phosphate synthase, large subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969205|gb|EFG82447.1| carbamoyl-phosphate synthase, large subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 1114

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L K  +P  +     S   A      +  P+ V  S +  GGRG
Sbjct: 696 KVLAKAALPAPEFGTAHSYEEARGVANEIGYPVLVRPSYVL-GGRG 740


>gi|289642536|ref|ZP_06474679.1| Carbamoyl-phosphate synthase L chain ATP-binding [Frankia symbiont
           of Datisca glomerata]
 gi|289507624|gb|EFD28580.1| Carbamoyl-phosphate synthase L chain ATP-binding [Frankia symbiont
           of Datisca glomerata]
          Length = 662

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAE-----SAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           AK L+ K  VPV  G+VI +   A+      A   L  PL V K+    GGRG    +++
Sbjct: 119 AKELMDKAGVPVLPGLVIDADLLADGGQLSQAAADLAFPLLV-KAAYGGGGRGMRIVRQV 177

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTL-----ITKQTGPTGSRVNCVYVEDGADILRE 117
              ++     +    S   +    L   +     I  Q             E    I R 
Sbjct: 178 DELAEAVAGAQREAASAFGNATVFLEHYVERPRHIEVQIFADQHGNAVHLFERECSIQRR 237

Query: 118 L 118
            
Sbjct: 238 Y 238


>gi|302533013|ref|ZP_07285355.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302441908|gb|EFL13724.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 410

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 26/124 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+LRK  + + +     SV  A  A++ +  P  +               K        G
Sbjct: 111 AVLRKAGLDLPRYATAESVGEAVRAVEDIGLPAVI---------------KPSDQTGSLG 155

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    S   V    +E L          P G  V    +E+  +       + +VD    
Sbjct: 156 VMKVESADRVRELAQEAL-------LLSPGGRIV----IEEFLEGTEHTLAAFMVDGKLH 204

Query: 130 MVAF 133
              F
Sbjct: 205 RFGF 208


>gi|223985921|ref|ZP_03635957.1| hypothetical protein HOLDEFILI_03263 [Holdemania filiformis DSM
           12042]
 gi|223962108|gb|EEF66584.1| hypothetical protein HOLDEFILI_03263 [Holdemania filiformis DSM
           12042]
          Length = 418

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA++ KYN+P A     S    A++ ++  P P+ V+K+   A G+             
Sbjct: 107 SKAMMHKYNIPTAAYASFSDYEEAKAYLEKQPVPV-VLKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV +  + +   S ++E++
Sbjct: 153 -GVIIAQTQEQAQSALKEMM 171


>gi|169334735|ref|ZP_02861928.1| hypothetical protein ANASTE_01141 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257473|gb|EDS71439.1| hypothetical protein ANASTE_01141 [Anaerofustis stercorihominis DSM
           17244]
          Length = 416

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 22/104 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L KY +P AK + +++       ++    P+ VVK+   A G+              
Sbjct: 107 KRFLEKYKIPTAKYLEVTTYEEGVKNLENFGFPV-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
           GV +  + +  ++ +++I    ++ K  G +G   N V +E+  
Sbjct: 152 GVIICENREMAVNALKDI----MVDKVFGDSG---NSVVIEEFL 188


>gi|146305742|ref|YP_001186207.1| phosphoribosylamine--glycine ligase [Pseudomonas mendocina ymp]
 gi|145573943|gb|ABP83475.1| phosphoribosylamine--glycine ligase [Pseudomonas mendocina ymp]
          Length = 429

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|114778757|ref|ZP_01453567.1| acetyl-CoA carboxylase [Mariprofundus ferrooxydans PV-1]
 gi|114551008|gb|EAU53571.1| acetyl-CoA carboxylase [Mariprofundus ferrooxydans PV-1]
          Length = 449

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVP-VAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  + + NVP V      +++V  A++  K    P+ +VK+    GGRG
Sbjct: 119 AKQKMDEANVPLVPGSDGAVTTVDEAKAIAKAAGFPV-IVKASAGGGGRG 167


>gi|294497450|ref|YP_003561150.1| carbamoyl-phosphate synthase, large subunit [Bacillus megaterium QM
           B1551]
 gi|294347387|gb|ADE67716.1| carbamoyl-phosphate synthase, large subunit [Bacillus megaterium QM
           B1551]
          Length = 1036

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 47/216 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ + N PV +  V++ V  A +  + +  P+ V  +    G             + G
Sbjct: 133 RALMNELNEPVPESEVVTKVEEALAFAEKIGFPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    S++ +       L  + IT+             +E      +E+   ++ D  +
Sbjct: 180 GI--AHSMEELEKLSASGLRESAITQC-----------LIEKSIAGFKEVEYEVMRDVNN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDV-----ASLCDMLELQG 181
             +          ++E +          +++ P   +T     +       +   L + G
Sbjct: 227 TCITI-------CNMENIDPVGVHTGDSVVVAPSQTLTDVEYQMLRSASVKIISSLGIIG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              I       +       K   L+E+NP +   + 
Sbjct: 280 GCNIQFALDPKS-------KQYYLIEVNPRVSRSSA 308


>gi|302554642|ref|ZP_07306984.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302472260|gb|EFL35353.1| acyl-CoA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 941

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 8/85 (9%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y + V + +   S  AA  A + L  P+ +  +  H   R       L    +  
Sbjct: 724 DLLGHYGIHVHRALPAPSPDAAAEAARGLGYPVALKATAPHLRHRADLGGVRLDLLDEDQ 783

Query: 70  VRVES--------SLKSVISDIREI 86
           +R           + + +   ++ +
Sbjct: 784 LRRAYAELTEQFGAPEELRPVVQRM 808


>gi|159899823|ref|YP_001546070.1| lysine biosynthesis enzyme LysX [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892862|gb|ABX05942.1| lysine biosynthesis enzyme LysX [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 287

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 15  YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
             VP  + ++  +  +A  AI++L  P+ V+K  I + GR
Sbjct: 104 NGVPSPRCLLAYTQDSALEAIESLGYPV-VLKPVIGSWGR 142


>gi|58582832|ref|YP_201848.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624699|ref|YP_452071.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577671|ref|YP_001914600.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58427426|gb|AAW76463.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368639|dbj|BAE69797.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188522123|gb|ACD60068.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 381

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALAQIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|50547571|ref|XP_501255.1| YALI0B23188p [Yarrowia lipolytica]
 gi|49647121|emb|CAG83508.1| YALI0B23188p [Yarrowia lipolytica]
          Length = 565

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 35/128 (27%)

Query: 6   YQAKALLRKYNVPVAKGV-VISSVHAA-ESAIKTLPGPLYVVKSQIHA-GGRGKGRFKEL 62
           Y+ K  L  + +PVA+   V  S  AA   A + +  P  VVK++  A  GRG    K  
Sbjct: 104 YRQKEHLISHGIPVAESYEVTESTEAALVVAAEKVGYPC-VVKAKTLAYDGRGNFVLKGP 162

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                       ++K  +  + +                    +YVE     ++E  L++
Sbjct: 163 -----------ENVKEALEFLSD------------------RPLYVEKWCPFVKE--LAV 191

Query: 123 LVDRTSGM 130
           +V R++  
Sbjct: 192 MVVRSTDG 199


>gi|46849451|dbj|BAD17935.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Cephaloscyllium umbratile]
          Length = 997

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 21/103 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++++P A+    +    A S I+    P  VVK+   A G+             
Sbjct: 94  AKDFLDRHDIPTARWKAFTDPKEACSYIQHADFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV V + +      +R+I    +  +  G  G     V VE+
Sbjct: 141 -GVIVAADIGEACKAVRDI----MQERTFGSAG---ETVIVEE 175


>gi|39934479|ref|NP_946755.1| putative urea amidolyase [Rhodopseudomonas palustris CGA009]
 gi|39648328|emb|CAE26848.1| putative urea amidolyase [Rhodopseudomonas palustris CGA009]
          Length = 1182

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 37/226 (16%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L +  NVP+  G  +I S+  A  A   +  P  ++KS    GG G     +   
Sbjct: 117 HRARELAQGSNVPLLPGTGLIDSIDEALEAAARIGFP-LMLKSTAGGGGIGMQLCHDEAT 175

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +    V+ + ++   D                       VY+E      R + + +  
Sbjct: 176 LRERFATVQRTARASFGDA---------------------RVYLERFVADARHIEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQA 183
           D        IA  +    ++   +   ++       P  G++ E  A L    + L    
Sbjct: 215 DGQGN---VIALGERDCSLQRRNQKVVEET------PAPGISDEMRARLHQAAVALGQSV 265

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
             +       +Y    D +   LE+N  + +++    V ++    D
Sbjct: 266 AYESAGTVEFIYDVARD-EFYFLEVNTRLQVEHP---VTEAVFGVD 307


>gi|94311534|ref|YP_584744.1| CoA-binding [Cupriavidus metallidurans CH34]
 gi|93355386|gb|ABF09475.1| pimeloyl-CoA synthetase [Cupriavidus metallidurans CH34]
          Length = 708

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFK 60
           + E + KA+LR   + +    V +++  A    + +  PL   VV  QI    +      
Sbjct: 486 LSEPEGKAMLRAAGIAIPVSRVAATLAQARLLAREVGYPLVAKVVSEQIQ--HKSDVGGV 543

Query: 61  ELPADSKGGVRVES 74
            +      G+    
Sbjct: 544 VVGIHDDAGLEAAW 557


>gi|325845260|ref|ZP_08168564.1| carbamoyl-phosphate synthase, large subunit [Turicibacter sp. HGF1]
 gi|325488701|gb|EGC91106.1| carbamoyl-phosphate synthase, large subunit [Turicibacter sp. HGF1]
          Length = 1061

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 42/204 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LLR+  VP   G    SV  A      +  P+ +  S +  G                 
Sbjct: 672 KLLRELEVPQPLGSTCQSVEGALEIANRIGYPVLLRPSYVLGG---------------RA 716

Query: 70  VRVESSLKSVISDIREIL---GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           + +  +   +   ++E L   G   I      TG  V    + DG ++    Y+  +++ 
Sbjct: 717 MEIIDNDAEIERYMKEALKENGENPILIDRYLTGKEVEVDAISDGENV----YIPGIMEH 772

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                       G        +    K+ +LL+D            +   L++ G   I 
Sbjct: 773 IERAGV----HSGDSMAVYPPQTLSDKVMELLVDYTT--------RIARGLKIVGLLNIQ 820

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                        ++++ +LE+NP
Sbjct: 821 FV--------VTKEEEVYVLEVNP 836


>gi|114762647|ref|ZP_01442081.1| propionyl-CoA carboxylase, alpha subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114544557|gb|EAU47563.1| propionyl-CoA carboxylase, alpha subunit [Roseovarius sp. HTCC2601]
          Length = 666

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 58/205 (28%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K + ++  V    G   +I     A      +  P+ +  S                  
Sbjct: 119 SKKIAKEAGVNTVPGYMGLIEDADEAVKISGEIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + +      +        +          + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWNDQEAREGFQSSKNEAASSFGD-------DRIFIEKFVTQPRHIEIQVLCD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                +      +    I+   +   ++     +DP       E   +L   +       
Sbjct: 217 AHGNGLWL---NERECSIQRRNQKVVEEAPSPFLDPETRKAMGEQAVALAKAVGYTSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++   +         +K+   LE+N
Sbjct: 274 VEF--IVDG------EKNFYFLEMN 290


>gi|114566110|ref|YP_753264.1| biotin carboxylase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337045|gb|ABI67893.1| biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl
           transferase subunit alpha [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 449

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           QA+ L++   VPV  G    + S   A +  + +  P+ +  S
Sbjct: 118 QARELVKSVGVPVVPGSDGAVQSYKEALAVAREIGYPVMIKAS 160


>gi|255561879|ref|XP_002521948.1| phosphoribosylaminoimidazole carboxylase atpase-subunit, putative
           [Ricinus communis]
 gi|223538752|gb|EEF40352.1| phosphoribosylaminoimidazole carboxylase atpase-subunit, putative
           [Ricinus communis]
          Length = 629

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 31/155 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             ++ +P+ + + I  +  A+ A      PL +   ++   GRG                
Sbjct: 186 FSRHGIPLPEFMQIDDLEGAKRAGDLYGYPLMIKSRRLAYDGRGNA-------------- 231

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           V  + + + S +  + G                 +YVE  A  ++EL + +   R + ++
Sbjct: 232 VAKTEEDLSSAVTALGGFE-------------RGLYVEKWAPFIKELAVIVARGRDNSIL 278

Query: 132 AF----IASTQGGMDIEEVAKDYPQKIFKLLIDPL 162
            +        +    I +   + P KI KL  D  
Sbjct: 279 CYPVVETIHRENICHIVKAPANVPWKIKKLATDVA 313


>gi|254458222|ref|ZP_05071648.1| carbamoyl-phosphate synthase, large subunit [Campylobacterales
           bacterium GD 1]
 gi|207085058|gb|EDZ62344.1| carbamoyl-phosphate synthase, large subunit [Campylobacterales
           bacterium GD 1]
          Length = 1085

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 50/165 (30%), Gaps = 33/165 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +   +   ++  A  A +T+  P+ +  S   AG               G
Sbjct: 131 KEAMIKIGMDLPFSMYAYNMDDALKAAETIGFPIIIRASFTLAG---------------G 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            V  + +E+     +E  + ++ D+  
Sbjct: 176 GSGVAYNMDEFKKLAARGLDES-----------PVTEILIEESLLGWKEYEMEVIRDKAD 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
             +           IE            + + P + +T ++   +
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQRM 262


>gi|163850528|ref|YP_001638571.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium
           extorquens PA1]
 gi|163662133|gb|ABY29500.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium
           extorquens PA1]
          Length = 455

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 11/113 (9%)

Query: 7   QAKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +P V   +G V      A+     +  P+ V K+    GGRG    +   
Sbjct: 118 EAKRTAKRLGIPCVPGSEGGVTD-PDEAKRVAAEIGYPVLV-KAASGGGGRGMKVARSES 175

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTL-----ITKQTGPTGSRVNCVYVEDG 111
              +      +  K+   D    L   L     I  Q    G   + V++ + 
Sbjct: 176 ELEQALDMARTEAKAAFGDDAVYLEKYLTKPRHIEVQILGDGKG-HAVHLAER 227


>gi|33865918|ref|NP_897477.1| ribosomal protein S6 modification protein [Synechococcus sp. WH
           8102]
 gi|81574444|sp|Q7U6F4|RIMK_SYNPX RecName: Full=Ribosomal protein S6 modification protein
 gi|33633088|emb|CAE07899.1| possible ribosomal protein S6 modification protein [Synechococcus
           sp. WH 8102]
          Length = 466

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A  L  ++ + +      SS    +  IK + G   ++K    A GRG     E    ++
Sbjct: 265 ASQLFVRHGLNMPVTGFASSPLDTKDLIKMVGGAPLILKLLEGAQGRG-VVLAETQKAAE 323

Query: 68  GGVRVESSLKS---VISDIREILGSTLITKQTGPTGSRVNCV 106
             +    SL +   V   I+E  G  L     G  G  V+ +
Sbjct: 324 SVINAMKSLNANLLVQEFIKEAGGKDLRCFVIG--GKVVSAI 363


>gi|255010280|ref|ZP_05282406.1| phosphoribosylamine--glycine ligase [Bacteroides fragilis 3_1_12]
 gi|313148078|ref|ZP_07810271.1| phosphoribosylamine-glycine ligase [Bacteroides fragilis 3_1_12]
 gi|313136845|gb|EFR54205.1| phosphoribosylamine-glycine ligase [Bacteroides fragilis 3_1_12]
          Length = 424

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++++P A+   V   ++    + ++TL  P YV+K+     G+           
Sbjct: 110 AKEFMQRHHIPTARYRSVTAGTLDEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G+    V +E+   
Sbjct: 158 ---GVLILPTLEEAQKELKEMLGGMF--------GNASATVVIEEFLS 194


>gi|229493673|ref|ZP_04387458.1| carbamoyl-phosphate synthase, large subunit [Rhodococcus
           erythropolis SK121]
 gi|229319634|gb|EEN85470.1| carbamoyl-phosphate synthase, large subunit [Rhodococcus
           erythropolis SK121]
          Length = 1118

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 696 RVLTEAGLPAPKFGTATTFDGAREIAAGIGYPVLVRPSYVL-GGRG 740


>gi|227828240|ref|YP_002830020.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.14.25]
 gi|229585468|ref|YP_002843970.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.27]
 gi|227460036|gb|ACP38722.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.14.25]
 gi|228020518|gb|ACP55925.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.27]
          Length = 283

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L K+N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 95  ILAKHNIPTPKTFIAFDKTNAMEYSKKLGYPV-VIKPVEGSWGRMVAKADNL 145


>gi|226306491|ref|YP_002766451.1| carbamoyl-phosphate synthase large chain [Rhodococcus erythropolis
           PR4]
 gi|226185608|dbj|BAH33712.1| carbamoyl-phosphate synthase large chain [Rhodococcus erythropolis
           PR4]
          Length = 1118

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 696 RVLTEAGLPAPKFGTATTFDGAREIAAGIGYPVLVRPSYVL-GGRG 740


>gi|225850175|ref|YP_002730409.1| D-alanine--D-alanine ligase B (D-alanylalanine synthetaseB)
           (D-Ala-D-Ala ligase B) [Persephonella marina EX-H1]
 gi|225644851|gb|ACO03037.1| D-alanine--D-alanine ligase B (D-alanylalanine synthetaseB)
           (D-Ala-D-Ala ligase B) [Persephonella marina EX-H1]
          Length = 303

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 43/221 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L+   + V +G  I ++         L  P+ V               K     S  
Sbjct: 104 KDILKAEGITVPEGYTIQNLDQIND--LRLGYPVVV---------------KPNSEGSSI 146

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV++  +   +   + EIL                + V +E      RE+ + +L     
Sbjct: 147 GVKIVENEDQLGKAVGEIL-------------KIDSKVIIERFIK-GREITVGILNGEPL 192

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-VASLCDMLELQGQARIDG 187
            ++             +      + I    I+  +    ++    + ++L  +G AR+D 
Sbjct: 193 DIIEIKVKEGFYDYYNKYISQETEYICPAEIESSLYRKIQNTALKIYNILGCKGVARVDF 252

Query: 188 GDLFPNLYKAFCDKD-MSLLEINPLIIMKNGRLRVLDSKIS 227
                       DKD    LE+N +  + +  L    + + 
Sbjct: 253 I----------LDKDKPYFLEVNTIPGLTDHSLIPKAAAVK 283


>gi|53711375|ref|YP_097367.1| phosphoribosylamine--glycine ligase [Bacteroides fragilis YCH46]
 gi|60679692|ref|YP_209836.1| phosphoribosylamine--glycine ligase [Bacteroides fragilis NCTC
           9343]
 gi|265764820|ref|ZP_06093095.1| phosphoribosylamine-glycine ligase [Bacteroides sp. 2_1_16]
 gi|52214240|dbj|BAD46833.1| phosphoribosylamine--glycine ligase [Bacteroides fragilis YCH46]
 gi|60491126|emb|CAH05874.1| putative phosphoribosylamine--glycine ligase [Bacteroides fragilis
           NCTC 9343]
 gi|263254204|gb|EEZ25638.1| phosphoribosylamine-glycine ligase [Bacteroides sp. 2_1_16]
          Length = 424

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++++P A+   V   +++   + ++TL  P YV+K+     G+           
Sbjct: 110 AKEFMHRHHIPTARYQSVTADTLNEGLAFLETLEAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G+    V +E+   
Sbjct: 158 ---GVLILPTLEEAKKELKEMLGGMF--------GNASATVVIEEFLS 194


>gi|302799709|ref|XP_002981613.1| hypothetical protein SELMODRAFT_154584 [Selaginella moellendorffii]
 gi|300150779|gb|EFJ17428.1| hypothetical protein SELMODRAFT_154584 [Selaginella moellendorffii]
          Length = 499

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K  VP   G   ++ +   A      +  P+ ++K+    GGRG      L  +
Sbjct: 167 ARDTMKKAGVPTVPGSDGLVETTEEAIRLAHEIGFPV-MIKATAGGGGRGM----RLANE 221

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
            +  V++   L+   S+     G+ 
Sbjct: 222 PEEFVKL---LQQARSEAGAAFGND 243


>gi|240949500|ref|ZP_04753840.1| carbamoylphosphate synthase large subunit (split gene in
           MJ)/ATP-dependent carboxylate-amine ligase
           [Actinobacillus minor NM305]
 gi|240296073|gb|EER46734.1| carbamoylphosphate synthase large subunit (split gene in
           MJ)/ATP-dependent carboxylate-amine ligase
           [Actinobacillus minor NM305]
          Length = 392

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VAKG V      A    K L  P+ +
Sbjct: 119 QMKEVFRKAGLKVAKGRVFKDDADARKLAKELKFPVII 156


>gi|153838111|ref|ZP_01990778.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149748497|gb|EDM59356.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 877

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDEIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTS 128
               + + V +  + IL +   +  +      V+ + V+  A +    EL +S+ VD+  
Sbjct: 536 LNLRNSREVSNAAQSILDTVKFSYPSAN----VHGLLVQGMAKLGSAEELRISIAVDKVF 591

Query: 129 GMVAFIASTQGGMDIE 144
           G V  +   QGG +  
Sbjct: 592 GPVILLG--QGGSEWN 605


>gi|28900739|ref|NP_800394.1| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260877675|ref|ZP_05890030.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260896055|ref|ZP_05904551.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
           Peru-466]
 gi|28809185|dbj|BAC62227.1| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308088118|gb|EFO37813.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
           Peru-466]
 gi|308090579|gb|EFO40274.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 877

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDEIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTS 128
               + + V +  + IL +   +  +      V+ + V+  A +    EL +S+ VD+  
Sbjct: 536 LNLRNSREVSNAAQSILDTVKFSYPSAN----VHGLLVQGMAKLGSAEELRISIAVDKVF 591

Query: 129 GMVAFIASTQGGMDIE 144
           G V  +   QGG +  
Sbjct: 592 GPVILLG--QGGSEWN 605


>gi|330960011|gb|EGH60271.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 431

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|308509260|ref|XP_003116813.1| CRE-PYR-1 protein [Caenorhabditis remanei]
 gi|308241727|gb|EFO85679.1| CRE-PYR-1 protein [Caenorhabditis remanei]
          Length = 2238

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 32/129 (24%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +        VA     +++  A  A + L  P+ V  +    G            
Sbjct: 535 RDLFNQEISAIGEKVAPSKAATTMEGAIEAAEELGYPVLVRAAYALGGL----------- 583

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G     + + +++  ++ L  +             N V V+      +E+   ++ 
Sbjct: 584 ----GSGFADNREELVAIAQQALAHS-------------NQVLVDKSLKGWKEVEYEVVR 626

Query: 125 DRTSGMVAF 133
           D     +  
Sbjct: 627 DAYDNCITV 635


>gi|302531091|ref|ZP_07283433.1| phosphoribosylamine-glycine ligase [Streptomyces sp. AA4]
 gi|302439986|gb|EFL11802.1| phosphoribosylamine-glycine ligase [Streptomyces sp. AA4]
          Length = 419

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 28/119 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V+ +    ++A++    P +VVK    A G+             
Sbjct: 106 AKDVMAAAKVPTARSEVVDTPARLDAALQRFG-PTWVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV V   ++        +L            G  V    +E   D         +  R
Sbjct: 152 -GVVVTQDVEVARKHALMLLDG----------GHPV---LLESFLDGPEASLFCFVDGR 196


>gi|291166531|gb|EFE28577.1| phosphoribosylformylglycinamidine synthase [Filifactor alocis ATCC
           35896]
          Length = 1651

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 13/103 (12%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL----PGPLYVVKSQIHAGGRGKGRFKELP 63
           AK  + ++N+P AK    ++   A +  + L    P    V+K+     G  +G+   + 
Sbjct: 106 AKEFMNQHNMPTAKYKKCTTKEEAVAYARELRTNNPSKTVVLKAD----GLCQGKGVVIA 161

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
            +        S +       ++I G T +  +    G  ++ +
Sbjct: 162 ENDTMIESYCSDIFD-----KKIFGETSLVVEEYLDGFEISQL 199


>gi|227830998|ref|YP_002832778.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.S.2.15]
 gi|229579878|ref|YP_002838277.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.G.57.14]
 gi|238620432|ref|YP_002915258.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.4]
 gi|284998490|ref|YP_003420258.1| Lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.D.8.5]
 gi|227457446|gb|ACP36133.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.S.2.15]
 gi|228010593|gb|ACP46355.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.G.57.14]
 gi|238381502|gb|ACR42590.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus M.16.4]
 gi|284446386|gb|ADB87888.1| Lysine biosynthesis enzyme LysX [Sulfolobus islandicus L.D.8.5]
 gi|323475307|gb|ADX85913.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus REY15A]
          Length = 283

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L K+N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 95  ILAKHNIPTPKTFIAFDKTNAMEYSKKLGYPV-VIKPVEGSWGRMVAKADNL 145


>gi|188991055|ref|YP_001903065.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. campestris str. B100]
 gi|167732815|emb|CAP51009.1| Phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. campestris]
          Length = 380

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGAPC-VLKTR-RFGYDGKGQFR 152


>gi|166712589|ref|ZP_02243796.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 381

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALAQIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|162149109|ref|YP_001603570.1| carbamoyl phosphate synthase large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545147|ref|YP_002277376.1| carbamoyl phosphate synthase large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787686|emb|CAP57282.1| putative carbamoyl-phosphate synthase large chain
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532824|gb|ACI52761.1| carbamoyl-phosphate synthase, large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 1084

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 53/161 (32%), Gaps = 33/161 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +   + V+  ++  A +A++ +  P  +             R       S GG+    +
Sbjct: 140 GIESPRSVIAHTLDEARAALEQVGLPAVI-------------RPSFTMGGSGGGI--AYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            +     +   L ++  T+           V +E+     +E  + ++  R S     I 
Sbjct: 185 REEFDQIVASGLDASPTTE-----------VLIEESVLGWKEFEMEVV--RDSADNCIIV 231

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            +     IE +          + + P + +T ++   + D 
Sbjct: 232 CS-----IENIDPMGVHTGDSITVAPALTLTDKEYQRMRDA 267



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 36/206 (17%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA   L K  +      +  +   AE   + +  P+ +  S +  G             
Sbjct: 683 FQAM--LHKLGLRQPDNGIARTAAEAEDVAERIGYPVVIRPSYVLGGR------------ 728

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           +   V   +SL+  +    ++ G  + +            V ++   +   E  +  + D
Sbjct: 729 AMEIVHDRASLQRYMRVALQLAGHDIASGP----------VLIDRYLNDAIEADVDCISD 778

Query: 126 RTSGMVAFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
             +    ++A   G M+ IEE           L   P   ++   V  L +  E    AR
Sbjct: 779 GHT---VYVA---GVMEHIEEAGIHSGDSACSL---PPYTLSPAIVTELKEQTE--AMAR 827

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
             G     N+  A  D+D+ +LE+NP
Sbjct: 828 ELGIVGLMNVQYAIKDQDIFVLEVNP 853


>gi|156744015|ref|YP_001434144.1| biotin carboxylase-like protein [Roseiflexus castenholzii DSM
           13941]
 gi|156235343|gb|ABU60126.1| biotin carboxylase-like protein [Roseiflexus castenholzii DSM
           13941]
          Length = 389

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L  +  V VA+G++  S     +    +  P  V K  +  G
Sbjct: 119 KRLFTRAQVDVARGILAHSPAQVRAFAVEVGYP-LVAKPDVGVG 161


>gi|110802163|ref|YP_698464.1| biotin carboxylase [Clostridium perfringens SM101]
 gi|110682664|gb|ABG86034.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Clostridium
           perfringens SM101]
          Length = 450

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKS 47
            A+ +++K +VPV  G    I S   A    K +  P+ V  S
Sbjct: 118 MAREIMKKADVPVVPGYEGEIESPEFALKIAKKIGFPVIVKAS 160


>gi|18310056|ref|NP_561990.1| biotin carboxylase [Clostridium perfringens str. 13]
 gi|18144735|dbj|BAB80780.1| acetyl-CoA carboxylase [Clostridium perfringens str. 13]
          Length = 450

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKS 47
            A+ +++K +VPV  G    I S   A    K +  P+ V  S
Sbjct: 118 MAREIMKKADVPVVPGYEGEIESPEFALKIAKKIGFPVIVKAS 160


>gi|326329774|ref|ZP_08196094.1| carbamoyl-phosphate synthase, large subunit [Nocardioidaceae
           bacterium Broad-1]
 gi|325952360|gb|EGD44380.1| carbamoyl-phosphate synthase, large subunit [Nocardioidaceae
           bacterium Broad-1]
          Length = 1111

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 57/176 (32%), Gaps = 29/176 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L K  +   K  + ++ + A      +  P+ V  S +  G                G
Sbjct: 683 RVLHKAGLVAPKHGMATTFNEAREIAAEIGYPVLVRPSYVLGG---------------RG 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-------RELYLSL 122
           +++    +++ S I         T+ T      V+  +V+D  +I         EL+L  
Sbjct: 728 MQIVYDDEALRSYIEA------ATEVTPDKPVMVDK-FVDDAVEIDVDALYDGTELFLGG 780

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
           +++           +   +    +     ++I    +    GV    + ++   L 
Sbjct: 781 VMEHIEEAGIHSGDSSCALPPITLGAAEVERIRTATLAIAEGVGVRGLLNIQYALG 836


>gi|325270914|ref|ZP_08137501.1| phosphoribosylamine-glycine ligase [Prevotella multiformis DSM
           16608]
 gi|324986711|gb|EGC18707.1| phosphoribosylamine-glycine ligase [Prevotella multiformis DSM
           16608]
          Length = 422

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++ +P A       +++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKAFMKRHRIPTAAYQTFDGTTLEEGMKFLETLHAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++RE+LG           G+    V +E+   
Sbjct: 158 ---GVLIVPTLEEARKELREMLGGMF--------GNASAKVVIEEFLS 194


>gi|317505988|ref|ZP_07963820.1| carbamoyl-phosphate synthase [Segniliparus rugosus ATCC BAA-974]
 gi|316255764|gb|EFV15002.1| carbamoyl-phosphate synthase [Segniliparus rugosus ATCC BAA-974]
          Length = 1110

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL    +   K  V +S   A S    +  P+ V  S +  GGRG
Sbjct: 685 ELLGSLGLTAPKFGVATSAAQAASVADRIGYPVLVRPSFVL-GGRG 729


>gi|293376106|ref|ZP_06622356.1| carbamoyl-phosphate synthase, large subunit [Turicibacter sanguinis
           PC909]
 gi|292645260|gb|EFF63320.1| carbamoyl-phosphate synthase, large subunit [Turicibacter sanguinis
           PC909]
          Length = 1061

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 42/204 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LLR+  VP   G    SV  A      +  P+ +  S +  G                 
Sbjct: 672 KLLRELEVPQPLGSTCQSVEGALEIANRIGYPVLLRPSYVLGG---------------RA 716

Query: 70  VRVESSLKSVISDIREIL---GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
           + +  +   +   ++E L   G   I      TG  V    + DG ++    Y+  +++ 
Sbjct: 717 MEIIDNDAEIERYMKEALKENGENPILIDRYLTGKEVEVDAISDGENV----YIPGIMEH 772

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                       G        +    K+ +LL+D            +   L++ G   I 
Sbjct: 773 IERAGV----HSGDSMAVYPPQTLSDKVMELLVDYTT--------RIARGLKIVGLLNIQ 820

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                        ++++ +LE+NP
Sbjct: 821 FV--------VTKEEEVYVLEVNP 836


>gi|260583689|ref|ZP_05851437.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Granulicatella
           elegans ATCC 700633]
 gi|260158315|gb|EEW93383.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Granulicatella
           elegans ATCC 700633]
          Length = 456

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 91/297 (30%), Gaps = 35/297 (11%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+  + K  VPV  G   V+ +V       + +  PL +               K +  
Sbjct: 118 QARKQMMKAGVPVIPGSDGVVPTVEEGLKIAEKIGFPLLI---------------KAVAG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R   SL       ++ L +     Q          VY+E      + +   +L 
Sbjct: 163 GGGKGIRKVQSLDEFE---KQFLAAQQEALQAFGN----EEVYIERIIYPAKHIEFQILA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQA 183
           D        +   +    ++   +   ++     +D  +       A L    +  +   
Sbjct: 216 DSYGN---VVHLGERDCSLQRKNQKIIEEAPSPYLDDNLRKDMGQAAVLAATSVGYENAG 272

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQE 241
            I+   D   N Y  F + +  +   +P+  M  G  L     K++F +   +   DIQ 
Sbjct: 273 TIEFLVDQDKNFY--FMEMNTRIQVEHPITEMITGIDLVEWQLKVAFGERLNFTQDDIQI 330

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD 298
                      + A+    ++    G I  +    G     ++     G     F D
Sbjct: 331 ---KGHSIECRLNAECPRENFRPAPGTIEVLHQPNGGLGVRIESALYSGYKIPPFYD 384


>gi|169342362|ref|ZP_02863428.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           C str. JGS1495]
 gi|169299482|gb|EDS81546.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           C str. JGS1495]
          Length = 450

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKS 47
            A+ +++K +VPV  G    I S   A    K +  P+ V  S
Sbjct: 118 MAREIMKKADVPVVPGYEGEIESPEFALKIAKKIGFPVIVKAS 160


>gi|86605337|ref|YP_474100.1| phosphoribosylamine--glycine ligase [Synechococcus sp. JA-3-3Ab]
 gi|86553879|gb|ABC98837.1| phosphoribosylamine--glycine ligase [Synechococcus sp. JA-3-3Ab]
          Length = 431

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 28/125 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++  +P A  V  + +  A + + +   P+ + K                   + 
Sbjct: 108 AKQLMQEAGIPTAPAVGFADLSEALAHLNSRSYPVVIKK---------------DGLAAG 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +  +  +   L                + V +E+     +E+ +  L D  
Sbjct: 153 KGVTVAQNREEAVQALEAALA------------KPGDQVLIEEFIP-GQEVSVLALTDGQ 199

Query: 128 SGMVA 132
             +  
Sbjct: 200 ICVPL 204


>gi|987653|dbj|BAA10925.1| hypothetical 67KD protein [Escherichia coli K-12]
          Length = 612

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 49/146 (33%), Gaps = 19/146 (13%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S    A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGMNTLPTWIASDYAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      I     +         RV+ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA----RVHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIE 144
            + ++          +   +GG++  
Sbjct: 586 RV-VVEHDPVFGPLIML-GEGGVEWR 609


>gi|313123592|ref|YP_004033851.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280155|gb|ADQ60874.1| Acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 460

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 5   EYQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           E+ A+ L+ K+ VPV  G    I S   A+     +  P+ 
Sbjct: 117 EH-ARQLMIKHKVPVTPGSRDFIKSPEEAKKVAAEVGYPVL 156


>gi|297180130|gb|ADI16353.1| phosphoribosylamine-glycine ligase [uncultured bacterium
           HF130_01F24]
          Length = 431

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 22/115 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K    KY +P A     +SV  A + IK    P+ V+K+   A G+              
Sbjct: 109 KDFCSKYQIPTASYGTFTSVEPAINYIKKQQLPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV + +S K  +S + ++L         G  G RV    +E+        ++S++
Sbjct: 154 GVVIANSEKEAVSTLEDML----SGNAFGNAGHRV---VIEEFLIGEEASFISIV 201


>gi|300811545|ref|ZP_07092034.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300497485|gb|EFK32518.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
          Length = 460

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 5   EYQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           E+ A+ L+ K+ VPV  G    I S   A+     +  P+ 
Sbjct: 117 EH-ARQLMIKHKVPVTPGSRDFIKSPEEAKKVAAEVGYPVL 156


>gi|237798363|ref|ZP_04586824.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021215|gb|EGI01272.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 328

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTDIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|227892685|ref|ZP_04010490.1| carbamoyl-phosphate synthase [Lactobacillus ultunensis DSM 16047]
 gi|227865462|gb|EEJ72883.1| carbamoyl-phosphate synthase [Lactobacillus ultunensis DSM 16047]
          Length = 1062

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCKKLGEPVPPSKTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+   ++ + +    +  L  + +T+     
Sbjct: 180 GI--CNNREELAEIAKNGLELSPVTECLIEK 208


>gi|168217456|ref|ZP_02643081.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           NCTC 8239]
 gi|182626216|ref|ZP_02953974.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           D str. JGS1721]
 gi|177908480|gb|EDT71013.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           D str. JGS1721]
 gi|182380418|gb|EDT77897.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           NCTC 8239]
          Length = 450

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKS 47
            A+ +++K +VPV  G    I S   A    K +  P+ V  S
Sbjct: 118 MAREIMKKADVPVVPGYEGEIESPEFALKIAKKIGFPVIVKAS 160


>gi|168215278|ref|ZP_02640903.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           CPE str. F4969]
 gi|170713325|gb|EDT25507.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium perfringens
           CPE str. F4969]
          Length = 450

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKS 47
            A+ +++K +VPV  G    I S   A    K +  P+ V  S
Sbjct: 118 MAREIMKKADVPVVPGYEGEIESPEFALKIAKKIGFPVIVKAS 160


>gi|163757729|ref|ZP_02164818.1| RimK-like ATP-grasp [Hoeflea phototrophica DFL-43]
 gi|162285231|gb|EDQ35513.1| RimK-like ATP-grasp [Hoeflea phototrophica DFL-43]
          Length = 485

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 15/78 (19%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L+    +PV   V++      + A   L  P+                 K   +    G
Sbjct: 290 ELMAANGIPVPPTVMLIGPEDFQRAADQLGFPMV---------------LKVPDSSFSRG 334

Query: 70  VRVESSLKSVISDIREIL 87
           V    S++ +       L
Sbjct: 335 VSKVGSMEELRKLAGAWL 352


>gi|332524815|ref|ZP_08401007.1| propionyl-CoA carboxylase subunit alpha [Rubrivivax benzoatilyticus
           JA2]
 gi|332108116|gb|EGJ09340.1| propionyl-CoA carboxylase subunit alpha [Rubrivivax benzoatilyticus
           JA2]
          Length = 676

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G    I S   A    + +  P+ +  S                  
Sbjct: 119 SKKLANEAGVSTIPGWNEAIESPEQAVEIARGIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K               +          + V++E   +  R + + +L D
Sbjct: 164 GGKGLRVAFNDKEAHEGFASCRNEAKNSFGD-------DRVFIEKFVEEPRHIEIQVLGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
                   +   +    I+   +   ++     I D       E   +L   ++ Q    
Sbjct: 217 AHGN---VVYLHERECSIQRRHQKVIEEAPSPFISDATRKAMGEQAVALAKAVKYQSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             D+    LE+N
Sbjct: 274 VEFV--------VGKDQSFYFLEMN 290


>gi|209522374|ref|ZP_03270989.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia sp. H160]
 gi|209497192|gb|EDZ97432.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia sp. H160]
          Length = 454

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 118/342 (34%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +           + +  P+ +  +                 
Sbjct: 119 AKQTMIKTGVPCVPGSEGALPDDPKEIVKIARQIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SFKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     +I+  +  +
Sbjct: 263 ACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVTELITGVDIVQEQIRIAAGEKLM 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G +    M  G G+ + +      +  
Sbjct: 323 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRLTSWHMPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++  +  +I  S+  V+GI  NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAISRMRIALSEMVVEGIQTNI 418


>gi|163841148|ref|YP_001625553.1| acetyl-CoA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954624|gb|ABY24139.1| acetyltransferase (GNAT) family protein [Renibacterium salmoninarum
           ATCC 33209]
          Length = 813

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 2/103 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y + V      +S  AA SA + L  P+ V    + +  R +     +  +    
Sbjct: 687 QLLSFYGIQVLDSAPFTSDDAAVSAAQRLGWPVAVKT--MDSALRHRLDLGGVRLNIADA 744

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
             + +++  +   ++      L  +   P G       +ED  
Sbjct: 745 ESLRANIAQMRRALQPFGEFDLEVQSMAPVGQSCTLRAIEDPL 787


>gi|118474214|ref|YP_891521.1| carbamoyl phosphate synthase large subunit [Campylobacter fetus
           subsp. fetus 82-40]
 gi|118413440|gb|ABK81860.1| carbamoyl-phosphate synthase, large subunit [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 1084

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + + K +   ++  A  A   +  PL +  S    G                
Sbjct: 131 KEAMLKIGMDLPKSMYAYNMEEAMVAAGDIGFPLIIRASYTLGG---------------A 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++                    G   S +N + +E+     +E  + ++ D+  
Sbjct: 176 GSGVAYNIDEFRDLAEA-----------GIDASPINEILIEESLLGWKEFEMEVIRDKND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++   + D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQHMRDA 265


>gi|282851820|ref|ZP_06261183.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus gasseri
           224-1]
 gi|282557062|gb|EFB62661.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus gasseri
           224-1]
          Length = 1062

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCKKLGEPVPPSKTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    S + +    +  L  + +T+     
Sbjct: 180 GI--CHSHEELAEIAKNGLELSPVTECLIEK 208


>gi|262383018|ref|ZP_06076155.1| phosphoribosylamine-glycine ligase [Bacteroides sp. 2_1_33B]
 gi|262295896|gb|EEY83827.1| phosphoribosylamine-glycine ligase [Bacteroides sp. 2_1_33B]
          Length = 423

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVISS--VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++++P A+   IS+  +    + +++L  P YV+K+   A G+           
Sbjct: 110 AKAFMMRHHIPTARYKSISTENLEEGYAFLESLSAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ ++LG           G     V +E+  D
Sbjct: 158 ---GVLIIDNLEEAKKELGDMLGGMF--------GDASKTVVIEEFLD 194


>gi|254495666|ref|ZP_05108586.1| cyanophycin synthetase [Legionella drancourtii LLAP12]
 gi|254355117|gb|EET13732.1| cyanophycin synthetase [Legionella drancourtii LLAP12]
          Length = 855

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L  + +P  KG+ + +    ++AI  L  P  V+K     G  GKG    + +  K 
Sbjct: 197 KQVLSTHFIPTPKGLTVKTKEELDAAIAKLGFP-LVIKP--LNGNHGKGVTTNITSAQKA 253


>gi|229092932|ref|ZP_04224065.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-42]
 gi|228690436|gb|EEL44220.1| Carbamoyl-phosphate synthase large chain [Bacillus cereus Rock3-42]
          Length = 1018

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +P   G   ++V  A +  + +  P+ V  S +  G
Sbjct: 625 IPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGG 660


>gi|116095308|gb|ABJ60460.1| carbamoyl-phosphate synthase large subunit [Lactobacillus gasseri
           ATCC 33323]
          Length = 1071

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 142 KELCKKLGEPVPPSKTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 188

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    S + +    +  L  + +T+     
Sbjct: 189 GI--CHSHEELAEIAKNGLELSPVTECLIEK 217


>gi|327485604|gb|AEA80010.1| Protein acetyltransferase [Vibrio cholerae LMA3894-4]
          Length = 864

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|295694976|ref|YP_003588214.1| Carbamoyl-phosphate synthase L chain ATP- binding protein [Bacillus
           tusciae DSM 2912]
 gi|295410578|gb|ADG05070.1| Carbamoyl-phosphate synthase L chain ATP- binding protein [Bacillus
           tusciae DSM 2912]
          Length = 446

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR 58
           +A+  ++   VPV  G    + ++  A  A + +  P  +VK+    GG G  R
Sbjct: 119 EARRRMQAAGVPVVPGTERPVDTLEEAMEAAEGIGYP-LMVKASAGGGGIGMSR 171


>gi|259418056|ref|ZP_05741975.1| CoA-binding domain protein [Silicibacter sp. TrichCH4B]
 gi|259346962|gb|EEW58776.1| CoA-binding domain protein [Silicibacter sp. TrichCH4B]
          Length = 679

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 49/242 (20%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AKA L ++ + V +     SV AA +    +  P+ V+K      G G         
Sbjct: 476 EGEAKAWLARFGLRVPRSKPARSVVAARAVAADIGYPV-VLK------GEGIAH-----K 523

Query: 65  DSKGGVRVESS-LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSL 122
             +G VR+  +  + V      +                 +   VE+     + +L + +
Sbjct: 524 TEEGAVRLNLTCGQDVSDAAVAM---------------PTDRFLVEEMVTGAVADLLVGV 568

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQG 181
           + D   G   F+ +   G  + E+ +D    +  L        T+ +   +  +L   +G
Sbjct: 569 VKDPAHG---FVLTLAAGGTLTEIMQDSASVL--LPASDAALNTALESLRIAPLLSGYRG 623

Query: 182 QARIDGGDLFPNL-----YKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRH 236
               D   +   +     Y     + +  +EINPL+   +  +           +AL R 
Sbjct: 624 VPPADRAAILRAIRAVEAYVVAEAEGLEEIEINPLLCTPSDAVAA---------DALIRR 674

Query: 237 LD 238
            D
Sbjct: 675 KD 676


>gi|229513246|ref|ZP_04402711.1| protein acetyltransferase [Vibrio cholerae TMA 21]
 gi|229349656|gb|EEO14611.1| protein acetyltransferase [Vibrio cholerae TMA 21]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|229526884|ref|ZP_04416288.1| protein acetyltransferase [Vibrio cholerae bv. albensis VL426]
 gi|229337042|gb|EEO02060.1| protein acetyltransferase [Vibrio cholerae bv. albensis VL426]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|229581463|ref|YP_002839862.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.N.15.51]
 gi|228012179|gb|ACP47940.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus Y.N.15.51]
          Length = 283

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L K+N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 95  ILAKHNIPTPKTFIAFDKTNAMEYSKKLGYPV-VIKPVEGSWGRMVAKADNL 145


>gi|153214557|ref|ZP_01949444.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115255|gb|EAY34075.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|162139889|ref|YP_814898.2| carbamoyl phosphate synthase large subunit [Lactobacillus gasseri
           ATCC 33323]
 gi|238853376|ref|ZP_04643755.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus gasseri
           202-4]
 gi|238833948|gb|EEQ26206.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus gasseri
           202-4]
          Length = 1062

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCKKLGEPVPPSKTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    S + +    +  L  + +T+     
Sbjct: 180 GI--CHSHEELAEIAKNGLELSPVTECLIEK 208


>gi|104773956|ref|YP_618936.1| Acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|116513963|ref|YP_812869.1| biotin carboxylase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|103423037|emb|CAI97728.1| Acetyl-CoA carboxylase, biotin carboxylase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|116093278|gb|ABJ58431.1| Biotin carboxylase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325125623|gb|ADY84953.1| Acetyl-CoA carboxylase, biotin carboxylase [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 460

 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 5   EYQAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           E+ A+ L+ K+ VPV  G    I S   A+     +  P+ 
Sbjct: 117 EH-ARQLMIKHKVPVTPGSRDFIKSPEEAKKVAAEVGYPVL 156


>gi|319790348|ref|YP_004151981.1| CoA-binding domain protein [Thermovibrio ammonificans HB-1]
 gi|317114850|gb|ADU97340.1| CoA-binding domain protein [Thermovibrio ammonificans HB-1]
          Length = 663

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 128/407 (31%), Gaps = 89/407 (21%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           M + E Q   LL +Y +   +          E  +   P  + VV  +I           
Sbjct: 1   MFLTEPQVYELLERYGIETPRHRTFKRGEEVEWHL--FPAVVKVVSPKI----------- 47

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            +   S GGV      K +   + E+       +Q          V VE+      E +L
Sbjct: 48  -VHKSSVGGVVFVEGPKELQRAVEELFRKFPDAQQ----------VIVEEKLS-GIEAFL 95

Query: 121 SLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD----- 175
            +   R    +  IA   GG+ +E +    P  I      PL    SE    + +     
Sbjct: 96  GV--KRDPSFLHLIAVGLGGVLVELL--KDPVFI------PLSASRSETEKKIAETKLYR 145

Query: 176 ----MLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
                   +G   +    +         + +++ +++NPL I +N R+   D +   +  
Sbjct: 146 LVKGYRNFKGNLDLLLELIEKLKKLLKENPEIAEMDLNPLFITEN-RVVPADGRAVTEP- 203

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG 291
                 +  + R + +E  R                 IG   N   +  A +  ++ + G
Sbjct: 204 ----PPERPKFRPLPKELFRPRTVAV-----------IGASTNPKKVGYALVRNLEQFQG 248

Query: 292 APANFLDVGGGADQDKV--AAAFKIITS-DSSVKGILINIFGGIMRCDVLVKGILSAVKE 348
                         +KV     +  I +    V   L+ I           KG+   ++E
Sbjct: 249 K-----VFPVNPKHEKVLDFKCYPSILAVPEPVDCALVAI---------PAKGVPEVIRE 294

Query: 349 VKIN-IPLVMRLE---GANVDIGNRL-------IAESGLNVITAIDL 384
                + L + +    G   + G +L        AESG+ V+    L
Sbjct: 295 CGKKGVKLAVVISAGFGETGEEGRKLQEELKRAAAESGIRVLGPNTL 341


>gi|302759505|ref|XP_002963175.1| hypothetical protein SELMODRAFT_438375 [Selaginella moellendorffii]
 gi|300168443|gb|EFJ35046.1| hypothetical protein SELMODRAFT_438375 [Selaginella moellendorffii]
          Length = 499

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++K  VP   G   ++ +   A      +  P+ ++K+    GGRG      L  +
Sbjct: 167 ARDTMKKAGVPTVPGSDGLVETTEEAIRLAHEIGFPV-MIKATAGGGGRGM----RLANE 221

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
            +  V++   L+   S+     G+ 
Sbjct: 222 PEEFVKL---LQQARSEAGAAFGND 243


>gi|289667353|ref|ZP_06488428.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 381

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|257791419|ref|YP_003182025.1| carbamoyl-phosphate synthase, large subunit [Eggerthella lenta DSM
           2243]
 gi|257475316|gb|ACV55636.1| carbamoyl-phosphate synthase, large subunit [Eggerthella lenta DSM
           2243]
          Length = 1078

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 45/156 (28%), Gaps = 33/156 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + K  +  ++     S+  AE  +  L  P+ +  S    G                G  
Sbjct: 136 MAKLGIETSRSGYAYSIADAEDIVAELGYPVVLRPSFTLGG---------------AGGG 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +      +   + + L       +  P G     V VE+  +  +E  + ++ DR    +
Sbjct: 181 IAHDAAELHEIVGQGL-------ELSPAGE----VLVEESIEGWKEYEMEVMRDRAGNGI 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                      IE            + + P   +T 
Sbjct: 230 IV-------CSIENFDAMGVHTGDSITVAPAQTLTD 258


>gi|256810529|ref|YP_003127898.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus
           fervens AG86]
 gi|256793729|gb|ACV24398.1| acetyl-CoA carboxylase, biotin carboxylase [Methanocaldococcus
           fervens AG86]
          Length = 501

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK +++K  VP+  G    +  V  A    + +  P+ V
Sbjct: 119 AKKIMKKAGVPLIPGSDGAVEDVDEAIEIAEAIGFPVVV 157


>gi|138894347|ref|YP_001124800.1| carbamoyl phosphate synthase large subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265860|gb|ABO66055.1| Carbamoylphosphate synthetase heavy subunit [Geobacillus
           thermodenitrificans NG80-2]
          Length = 1042

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 65/187 (34%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+ +   PV +  ++++V  A +  + +  P+ +  +    G             + G
Sbjct: 133 RALMHELGEPVPESEIVTNVKEAVAFAEQIGFPIIIRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    ++K  I+ + +           G   S +    +E      +E+   ++ D+++
Sbjct: 180 GI--AENMKQFIALVEK-----------GLAESPIRQCLIERSVAGFKEIEYEVMRDQSN 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
             +          ++E V          +++ P   +T E+          +   L + G
Sbjct: 227 TCITV-------CNMENVDPVGVHTGDSIVVAPSQTLTDEEYQMLRSSAVKIISALGIIG 279

Query: 182 QARIDGG 188
              I   
Sbjct: 280 GCNIQFA 286


>gi|222056353|ref|YP_002538715.1| carbamoyl-phosphate synthase, large subunit [Geobacter sp. FRC-32]
 gi|221565642|gb|ACM21614.1| carbamoyl-phosphate synthase, large subunit [Geobacter sp. FRC-32]
          Length = 1080

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + V +  +  +   A   I+ +  P  +         R              
Sbjct: 133 KQAMEKIGLAVPRSGLAHNNAEAMEIIREIGFPAII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  +++                  TG   S  + + VE+     +E  L ++ D  +
Sbjct: 181 ---IAYNMEEYEKMSA-----------TGIDASPTDEILVEESVIGWKEYELEVMRDT-A 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             V  I S      IE            + + P   +T 
Sbjct: 226 DNVVIICS------IENFDPMGVHTGDSITVAPAQTLTD 258


>gi|325915564|ref|ZP_08177875.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325538280|gb|EGD09965.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 381

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGAPC-VLKTR-RFGYDGKGQFR 152


>gi|302541088|ref|ZP_07293430.1| carbamoyl-phosphate synthase, large subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458706|gb|EFL21799.1| carbamoyl-phosphate synthase, large subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 1103

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K     S   A+     +  P+ V  S +  GGRG
Sbjct: 683 RVLTEAGLPAPKYGTAFSFEQAKGIAAEIGYPVMVRPSYVL-GGRG 727


>gi|220917010|ref|YP_002492314.1| phosphoribosylglycinamide formyltransferase 2 [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954864|gb|ACL65248.1| phosphoribosylglycinamide formyltransferase 2 [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 387

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 26/141 (18%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
           R+  +  A+    S+  A  +A++ +  P  VVK  + + G+G+             VR 
Sbjct: 113 RELGLATARYAYASTPEAFRTAVREIGLPC-VVKPLMSSSGKGQSV-----------VRA 160

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E  +++  +              +G  G     V VE+      E+ L  +  R    + 
Sbjct: 161 EGDMEAAWAYA-----------MSGTRGDL-REVIVEEFISFESEITLLTVTQRRGETLF 208

Query: 133 F--IASTQGGMDIEEVAKDYP 151
              I   Q   D +E  + +P
Sbjct: 209 CPPIGHRQERGDYQESWQPHP 229


>gi|153800666|ref|ZP_01955252.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124123801|gb|EAY42544.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNLSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|254226468|ref|ZP_04920054.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621030|gb|EAZ49378.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|297159120|gb|ADI08832.1| phosphoribosylamine--glycine ligase [Streptomyces bingchenggensis
           BCW-1]
          Length = 426

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    VP A+  V +     + A+     P YVVK    A G+G
Sbjct: 106 AKDVMAAAGVPTARAYVCTDEAEIDEALDAFGAP-YVVKDDGLAAGKG 152


>gi|226313446|ref|YP_002773340.1| biotin carboxylase [Brevibacillus brevis NBRC 100599]
 gi|226096394|dbj|BAH44836.1| probable biotin carboxylase [Brevibacillus brevis NBRC 100599]
          Length = 451

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGG------RGKGRF 59
           A+ ++    VPV  G    I S   A     ++  P+ ++K+    GG      R +   
Sbjct: 118 ARRMMEAAGVPVVPGCEQAIDSPDEAAVIAVSIGYPV-MLKASAGGGGIGMHICRDEAEL 176

Query: 60  KELPADSKGGVRV 72
           ++    +KG  + 
Sbjct: 177 RQAYQSAKGRAKA 189


>gi|213968000|ref|ZP_03396146.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           tomato T1]
 gi|301383684|ref|ZP_07232102.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           tomato Max13]
 gi|302131613|ref|ZP_07257603.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213927343|gb|EEB60892.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           tomato T1]
          Length = 431

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLTEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|192360305|ref|YP_001981735.1| urea amidolyase [Cellvibrio japonicus Ueda107]
 gi|190686470|gb|ACE84148.1| urea amidolyase [Cellvibrio japonicus Ueda107]
          Length = 1212

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 65/205 (31%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++ L  +  VP+  G  ++ SV  A  A  TL  P+                 K      
Sbjct: 119 SRELAEQAGVPLTPGTGLLGSVEEATHAAATLGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIR--EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             G+   +S   +++     + LG    +          + V++E   D  R + + +  
Sbjct: 164 GIGLTRCNSEAELVNAYESVKRLGQNFFSD---------SGVFLERFVDNARHVEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D    ++A       G     + +   + + +     L   T E +  L   + L     
Sbjct: 215 DGKGNVLAL------GERDCSLQRRNQKVVEETPAPNLPAATREQL--LAASVSLGKMVN 266

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y    D +   LE+N
Sbjct: 267 YRSAGTIEYIYDPARD-EFYFLEVN 290


>gi|303247248|ref|ZP_07333522.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
           fructosovorans JJ]
 gi|302491407|gb|EFL51295.1| carbamoyl-phosphate synthase, large subunit [Desulfovibrio
           fructosovorans JJ]
          Length = 1079

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 23/66 (34%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K  +         +V  A +    +  P+ V  S +  G   +  +     ++   
Sbjct: 684 ELLIKLGLRQPANGTAFTVDEAAAIADKIGYPVVVRPSYVLGGRAMEIVYDRGDLENYFK 743

Query: 70  VRVESS 75
           V V +S
Sbjct: 744 VAVVAS 749


>gi|296331060|ref|ZP_06873534.1| pyruvate carboxylase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674215|ref|YP_003865887.1| pyruvate carboxylase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151704|gb|EFG92579.1| pyruvate carboxylase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412459|gb|ADM37578.1| pyruvate carboxylase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 1148

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 37/211 (17%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+    K  +PV  G      ++ A E   +T   P+ ++K+ +  GGRG          
Sbjct: 124 AREQAEKAGIPVIPGSDGPAETLEAVEQFGQTNGYPI-IIKASLGGGGRGM--------- 173

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               VR ES +K      +    +     +          VYVE   +  + + + ++ D
Sbjct: 174 --RIVRSESEVKEAYERAKSEAKAAFGNDE----------VYVEKLIENPKHIEVQVIGD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQAR 184
           +   +V      +    ++   +   +    + + P +     E   +L   +       
Sbjct: 222 KQGNVVHLF---ERDCSVQRRHQKVIEVAPSVSLSPELRNQICEAAVALAKNVNYINAGT 278

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           ++             + +   +E+NP + ++
Sbjct: 279 VEF---------LVANNEFYFIEVNPRVQVE 300


>gi|260663070|ref|ZP_05863963.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|260552691|gb|EEX25691.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           fermentum 28-3-CHN]
          Length = 1059

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   PV   + +S+V  A +  KT+  P+ V
Sbjct: 133 KELMQELGEPVPASLTVSTVEQALAFAKTVGYPVIV 168


>gi|260434712|ref|ZP_05788682.1| phosphoribosylamine--glycine ligase [Synechococcus sp. WH 8109]
 gi|260412586|gb|EEX05882.1| phosphoribosylamine--glycine ligase [Synechococcus sp. WH 8109]
          Length = 435

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 15/84 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++  VP A    ++S   A + ++ +  P  VVK+   A G+             
Sbjct: 118 AKQLMQEEGVPTAGHWAVTSEAEALAVLQEVQRP-LVVKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTL 91
            GV V  +++   + IRE      
Sbjct: 164 -GVTVADTVEESETAIREAFEGRF 186


>gi|229523066|ref|ZP_04412478.1| protein acetyltransferase [Vibrio cholerae TM 11079-80]
 gi|229339916|gb|EEO04926.1| protein acetyltransferase [Vibrio cholerae TM 11079-80]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|184155678|ref|YP_001844018.1| carbamoyl phosphate synthase large subunit [Lactobacillus fermentum
           IFO 3956]
 gi|226700931|sp|B2GD06|CARB_LACF3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|183227022|dbj|BAG27538.1| carbamoylphosphate synthase large subunit [Lactobacillus fermentum
           IFO 3956]
          Length = 1059

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   PV   + +S+V  A +  KT+  P+ V
Sbjct: 133 KELMQELGEPVPASLTVSTVEQALAFAKTVGYPVIV 168


>gi|153828761|ref|ZP_01981428.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875808|gb|EDL73943.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 893

 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|307721399|ref|YP_003892539.1| carbamoyl-phosphate synthase large subunit [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979492|gb|ADN09527.1| carbamoyl-phosphate synthase large subunit [Sulfurimonas
           autotrophica DSM 16294]
          Length = 1085

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 53/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +      + + K     SV  A   +K +  P+    S   AG            
Sbjct: 127 RQLFNEAMTKIGMDLPKSRNAYSVEEAIEVVKEIGFPVISRASFTLAG------------ 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG  V  +++      +E           G + S VN + + +     +E  + ++ 
Sbjct: 175 ---GGSGVAYNMEEFKKLAQE-----------GISASPVNEIEIMESMLGWKEYEMEVIR 220

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           D+    +           IE            + + P + +T ++   + D 
Sbjct: 221 DKADNCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQRMRDA 265


>gi|332795745|ref|YP_004457245.1| phosphoribosylaminoimidazole carboxylase [Acidianus hospitalis W1]
 gi|332693480|gb|AEE92947.1| Phosphoribosylaminoimidazole carboxylase [Acidianus hospitalis W1]
          Length = 395

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 29/164 (17%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           VP        S      A + +  P  + K ++ + G G                + +  
Sbjct: 126 VPTTTYAFAESAEEVRKACRDIGFPCLI-KPEMSSSGHGHV--------------LINKE 170

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
             +    +E +            G     V VE+   I  E  L++L  R +     +  
Sbjct: 171 DEIEDAYKESISH--------ARGKS-KRVIVEEYVKIDTE--LTILTYRYNTGNGIVTK 219

Query: 137 TQGGMDIEEVAKDYPQKIFKLLI--DPLIGVTSEDVASLCDMLE 178
           T   ++ +  +  Y +      +  D +    S     + + L 
Sbjct: 220 TFPPVEHQRPSYYYVESWQPATVQDDVVEKAKSY-AIKVVEELG 262


>gi|312958739|ref|ZP_07773259.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens WH6]
 gi|311287282|gb|EFQ65843.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens WH6]
          Length = 430

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLQEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|227821053|ref|YP_002825023.1| phosphoribosylamine--glycine ligase [Sinorhizobium fredii NGR234]
 gi|227340052|gb|ACP24270.1| phosphoribosylamine--glycine ligase [Sinorhizobium fredii NGR234]
          Length = 423

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 26/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  KY +P       +    A++ I+    P+ V+K+   A G+              
Sbjct: 107 KDLCAKYAIPTGAYKRFTEAEPAKAYIREQGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   ++ + E       +   G  G+ V    VE   D     +   L D  +
Sbjct: 152 GVTVAMTLDEALAAVDECF-----SGVFGAAGAEV---VVEAYLDGEEASFFC-LSDGKA 202

Query: 129 GMVAFIASTQG 139
            +   +AS Q 
Sbjct: 203 VLP--LASAQD 211


>gi|196011134|ref|XP_002115431.1| hypothetical protein TRIADDRAFT_29177 [Trichoplax adhaerens]
 gi|190582202|gb|EDV22276.1| hypothetical protein TRIADDRAFT_29177 [Trichoplax adhaerens]
          Length = 2200

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AK L  + N  +A   V  +V  A +A + L  P+ V  +    G
Sbjct: 519 AKKL-EEINESIAPSKVAYTVDEAINAAEALGYPVLVRAAFALGG 562


>gi|163840600|ref|YP_001625005.1| phosphoribosylamine--glycine ligase [Renibacterium salmoninarum
           ATCC 33209]
 gi|162954076|gb|ABY23591.1| phosphoribosylamine--glycine ligase [Renibacterium salmoninarum
           ATCC 33209]
          Length = 434

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 18/109 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   +VP A   V +    A  A+ T   P YVVK    A G+             
Sbjct: 106 AKQVMASASVPTAMARVATDSAEALEALDTFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGADI 114
            GV V S     ++  +     G T++ ++    G  V+   + DGAD+
Sbjct: 152 -GVVVTSDRDEALAHAQTCFDAGGTVVIEEFL-DGPEVSLFVLSDGADV 198


>gi|121703620|ref|XP_001270074.1| bifunctional purine biosynthetic protein Ade1, putative
           [Aspergillus clavatus NRRL 1]
 gi|119398218|gb|EAW08648.1| bifunctional purine biosynthetic protein Ade1, putative
           [Aspergillus clavatus NRRL 1]
          Length = 817

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++N+P A          A   + ++     V+K+   AGG+             
Sbjct: 115 SKDFMKRHNIPTAAYQNFYEYEPARQYLDSV-THQVVIKADGLAGGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV + ++ +     +RE+    ++  Q G  G   N V +E+
Sbjct: 161 -GVIIPTTKEEAHQALREM----MLDHQFGDAG---NEVVIEE 195


>gi|332157746|ref|YP_004423025.1| ADP forming acetyl coenzyme A synthetase [Pyrococcus sp. NA2]
 gi|331033209|gb|AEC51021.1| ADP forming acetyl coenzyme A synthetase [Pyrococcus sp. NA2]
          Length = 461

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F  + + R L I E  D +   S   E +  N+  I   G IG M   A           
Sbjct: 272 FKQSGVLRALTIGEAFDWARALSNLPEPQGDNVVIITNGGGIGVMATDAAEEEGLHLYDN 331

Query: 288 LYGGAP-ANFL----------DVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRC 335
           L      AN +          D+ G AD      A +   +   +  I++      ++  
Sbjct: 332 LEELKIFANHMPPFGSYKNPVDLTGMADAKSYEGAIRDALAHPEMHSIVVLYCQTAVLDP 391

Query: 336 DVLVKGILSAVKEVKINIPLVMRL-EGANVDIGNRLIAESGLNVIT 380
             L + I+          PLV+ +  G+        + E+G+    
Sbjct: 392 RELAEIIIREYNNSGRKKPLVVAIVGGSEAKEAINKLNENGIPAYP 437


>gi|258593391|emb|CBE69730.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 349

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 47/210 (22%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+ + +P  + + +     + S  + +  P+ VVK               +       
Sbjct: 131 RLLKAHGIPTPRTLRLRPADDSASIGRRIGYPM-VVKP-----------IDGVGCHGVFV 178

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
            R +S L+  I+  R+     ++  QT   G       V            S L D +  
Sbjct: 179 ARQQSELEQAIATARQKASDAILLAQTYIDG-------VAASV--------SFLTDGSRS 223

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIF--KLLID-PLIGVTSEDVASLCDML-ELQGQARI 185
           +   +       +++E+      +    ++  D PL  +       +   +  L+G   I
Sbjct: 224 VPLTL-------NLQEIRGRKRLRYHGGRIPFDHPLRTLAFRRAEEVVQAIPGLKGYVGI 276

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           D             D D  ++E+NP +   
Sbjct: 277 DL---------VLTDHDAVVIEVNPRLTTS 297


>gi|262392958|ref|YP_003284812.1| phosphoribosylamine--glycine ligase [Vibrio sp. Ex25]
 gi|262336552|gb|ACY50347.1| phosphoribosylamine--glycine ligase [Vibrio sp. Ex25]
          Length = 429

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|255597642|ref|XP_002536822.1| conserved hypothetical protein [Ricinus communis]
 gi|223518436|gb|EEF25561.1| conserved hypothetical protein [Ricinus communis]
          Length = 435

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 75/243 (30%), Gaps = 36/243 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTL--PGPLYVVKSQIHAGGRGKGRFK 60
           ++E +AKALL  Y V      + ++          L  P  + +V  QI           
Sbjct: 32  LNEIEAKALLTAYGVATVPTRLAATAQDVARICADLAPPYAVKIVSPQI----------- 80

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD--ILREL 118
                  GGV     L +  +             +T P  + +    VE         EL
Sbjct: 81  -SHKSDVGGV--ALDLPNAEAASAAAAAMAARIAKTCPE-AVITGFAVETMIPLSHAHEL 136

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG--VTSEDVASLCDM 176
            + L  D  +     +    GG  +E +          L + PL G    +    +    
Sbjct: 137 IVGLAQD-ATFGPVLMV-GAGGKAVEVLKDRA------LGLPPLDGDLAQAMIARTRISR 188

Query: 177 L-----ELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           L     +               L     D  D+  L+INPL +   G +  LD++I    
Sbjct: 189 LLTGYRDTPQADIAGVAATLEALSAIAVDLPDIVELDINPLRVDAYG-VLALDARIVITQ 247

Query: 231 NAL 233
           +A 
Sbjct: 248 DAS 250


>gi|167757325|ref|ZP_02429452.1| hypothetical protein CLORAM_02875 [Clostridium ramosum DSM 1402]
 gi|237735597|ref|ZP_04566078.1| acetyl-CoA carboxylase [Mollicutes bacterium D7]
 gi|167703500|gb|EDS18079.1| hypothetical protein CLORAM_02875 [Clostridium ramosum DSM 1402]
 gi|229381342|gb|EEO31433.1| acetyl-CoA carboxylase [Coprobacillus sp. D7]
          Length = 450

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 9/73 (12%)

Query: 14  KYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGR------FKELPAD 65
           +  VPV  G    ++++  A+     +  P+ + K+    GGRG  +      F +    
Sbjct: 125 EAGVPVVPGSDGSVNTLQEAKEVANQIGYPVLI-KASAGGGGRGMRKAFSEEEFDDAYLT 183

Query: 66  SKGGVRVESSLKS 78
           +K   +       
Sbjct: 184 AKAEAKACFGDDD 196


>gi|330963421|gb|EGH63681.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 431

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLTEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|326913282|ref|XP_003202968.1| PREDICTED: trifunctional purine biosynthetic protein
           adenosine-3-like [Meleagris gallopavo]
          Length = 1016

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 20/113 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA L ++ +P A+    ++   A   I +   P  VV++      RG    KE      
Sbjct: 110 AKAFLDRHGIPTARWKAFTNPQEACRFIISTDFPARVVRA------RGPAARKE------ 157

Query: 68  GGVRVESSLKSVISDIRE-----ILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
             V + +S +     ++E     + G  ++ ++    G  ++C+   DG  + 
Sbjct: 158 --VTIAASKEEACKAVQEVMQDRMFGEIIVIEELL-QGEELSCLCFTDGVTVA 207


>gi|320528991|ref|ZP_08030083.1| carbamoyl-phosphate synthase, large subunit [Selenomonas artemidis
           F0399]
 gi|320138621|gb|EFW30511.1| carbamoyl-phosphate synthase, large subunit [Selenomonas artemidis
           F0399]
          Length = 1075

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K   P+ +  ++  VH+A      +  P+ V  +    G             + G
Sbjct: 133 KETMEKLGEPIPESTIVEDVHSAVEFANKIGYPVIVRPAYTMGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +I+ + + L  ++I             V +E      +E+   ++  R  
Sbjct: 180 GI--AENEEELIAIVIKGLNYSMIG-----------QVLIERSVAGWKEIEFEVI--RDG 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQG 181
                   +    D   V       I   ++ P   +T  +          +   L ++G
Sbjct: 225 RDNCITVCSMENFDP--VGVHTGDSI---VVAPAQTLTDYEYQMLRSASLRIIRELGIEG 279

Query: 182 QARIDGG 188
                  
Sbjct: 280 GCNAQYA 286


>gi|257464131|ref|ZP_05628513.1| carbamoyl phosphate synthase large subunit [Fusobacterium sp. D12]
 gi|317061647|ref|ZP_07926132.1| carbamoyl-phosphate synthase,pyrimidine-specific [Fusobacterium sp.
           D12]
 gi|313687323|gb|EFS24158.1| carbamoyl-phosphate synthase,pyrimidine-specific [Fusobacterium sp.
           D12]
          Length = 1069

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 32/221 (14%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG--------- 55
           + L R+       P+ K  V+ S+         +  P+ V  +    G  G         
Sbjct: 128 RELFREAMEKIGEPILKSHVVESLEEGYKIANEIGYPVVVRPAYTLGGTGGGFAHNPQEL 187

Query: 56  -KGRFKELPADSKGGVRVESSL---KSVISDIREILGSTLITKQTGPTGSRV-----NCV 106
            +   K L     G V +E S+   K +  ++        IT         V     + +
Sbjct: 188 EEILLKGLSLSRVGQVLIERSILGWKEIEYEVIRDANGNAITVCNMENIDPVGIHTGDSI 247

Query: 107 YVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP----- 161
            V     +    Y   ++ R S  +       GG +++        +   + I+P     
Sbjct: 248 VVAPSQTLTDREYQ--MLRRASLKIVEEIGIVGGCNVQFALHPKSFEYAIIEINPRVSRS 305

Query: 162 ---LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
                  T   +A +   L +         ++    Y  F 
Sbjct: 306 SALASKATGYPIARVATKLAMGYLLDEVLNEVTGKTYACFE 346


>gi|302346498|ref|YP_003814796.1| phosphoribosylamine--glycine ligase [Prevotella melaninogenica ATCC
           25845]
 gi|302150377|gb|ADK96638.1| phosphoribosylamine--glycine ligase [Prevotella melaninogenica ATCC
           25845]
          Length = 422

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++N+P A       +++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKAFMKRHNIPTAAYETFDSTTIEEGMRFLETLKAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++RE+LG           G+    V +E+   
Sbjct: 158 ---GVLILPTLEEAKKELREMLGGMF--------GNASAKVVIEEFLS 194


>gi|298530255|ref|ZP_07017657.1| phosphoribosylamine/glycine ligase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509629|gb|EFI33533.1| phosphoribosylamine/glycine ligase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 421

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 25/140 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+L+ +  VP A   V    + A   ++    P+ V+K+   A G+             
Sbjct: 106 AKSLMSQAEVPTAGYRVFEDFNQAVKYVQGRDFPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V    +     + ++L   +        G     V +E+        +L+L   R 
Sbjct: 152 -GVVVADDFEQAREALDDMLVKQVF-------GKAGERVVIEEALSGEEASFLALCDGRN 203

Query: 128 SGMVAFIASTQGGMDIEEVA 147
                 + S+Q    I E  
Sbjct: 204 ---FLLLPSSQDHKRIGEND 220


>gi|194222019|ref|XP_001493941.2| PREDICTED: similar to propionyl-Coenzyme A carboxylase, alpha
           polypeptide [Equus caballus]
          Length = 747

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 196 ESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 240

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 241 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 293

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 294 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDSETRRAMGEQAVALAKAVKYSSAG 350

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 351 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 383


>gi|157363234|ref|YP_001470001.1| carbamoyl-phosphate synthase, large subunit [Thermotoga lettingae
           TMO]
 gi|167006452|sp|A8F453|CARB_THELT RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|157313838|gb|ABV32937.1| carbamoyl-phosphate synthase, large subunit [Thermotoga lettingae
           TMO]
          Length = 1105

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
             L++  + V    V  S+  A  A + +  P+ +  S +  G
Sbjct: 668 KFLKQSGLSVPPFSVARSIKEALRAAELIGFPVLIRPSYVLGG 710



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 36/213 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K  ++   + V +  ++SSV  A   ++    P+ +         R            
Sbjct: 131 QFKTAMKNCGLEVLESRLVSSVTEAMDVVREFGYPVVI---------RPSFTLGGSGGG- 180

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +  +L+ + + +   L  +             + V +E      +E  L ++ D 
Sbjct: 181 -----IAYNLQELKAIVENGLIES-----------PAHTVLIEKSVIGWKEYELEVMKDH 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQAR 184
               +           IE            + + P   +T              L     
Sbjct: 225 EDNFIVV-------CSIENFDPMGIHTGDSVTVAPAQTLTDVEYQCMRNAARKALSAIGF 277

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
             GG         +  K + ++E+NP +   + 
Sbjct: 278 DAGGCNIQFAVDTYTGK-LVIIEMNPRVSRSSA 309


>gi|238795642|ref|ZP_04639157.1| hypothetical protein ymoll0001_12330 [Yersinia mollaretii ATCC
           43969]
 gi|238720761|gb|EEQ12562.1| hypothetical protein ymoll0001_12330 [Yersinia mollaretii ATCC
           43969]
          Length = 880

 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R+  + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPHA----RIQGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ    +    L   +     D  +++ L+I+P++   +
Sbjct: 641 SRGSLQPLDILGLSRLLVQVSNLILDCPEITRLDIHPVLASGS 683


>gi|308187859|ref|YP_003931990.1| hypothetical protein Pvag_2368 [Pantoea vagans C9-1]
 gi|308058369|gb|ADO10541.1| Uncharacterized protein yfiQ [Pantoea vagans C9-1]
          Length = 885

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 15/144 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      + S   AA +    +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PVLQAYGLATLPTWIASDSAAAVAIADQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              ++ +G +    +   V      I       KQT P  +R+  + V+  A       L
Sbjct: 530 AHKSEVQGVMLYLRNASEVEHAAEAIFDRV---KQTLPQ-ARIEGLLVQSMASRAGAQEL 585

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE 144
            ++VD+ +     I   +GG++ +
Sbjct: 586 RVVVDQDALFGPIIMLGEGGVEWQ 609


>gi|255013025|ref|ZP_05285151.1| phosphoribosylamine--glycine ligase [Bacteroides sp. 2_1_7]
 gi|256838644|ref|ZP_05544154.1| phosphoribosylamine-glycine ligase [Parabacteroides sp. D13]
 gi|301307680|ref|ZP_07213637.1| phosphoribosylamine--glycine ligase [Bacteroides sp. 20_3]
 gi|256739563|gb|EEU52887.1| phosphoribosylamine-glycine ligase [Parabacteroides sp. D13]
 gi|300834354|gb|EFK64967.1| phosphoribosylamine--glycine ligase [Bacteroides sp. 20_3]
          Length = 423

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVISS--VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++++P A+   IS+  +    + +++L  P YV+K+   A G+           
Sbjct: 110 AKAFMMRHHIPTARYKSISTENLEEGYAFLESLSAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ ++LG           G     V +E+  D
Sbjct: 158 ---GVLIIDNLEEAKKELGDMLGGMF--------GDASKTVVIEEFLD 194


>gi|262203897|ref|YP_003275105.1| phosphoribosylglycinamide formyltransferase 2 [Gordonia bronchialis
           DSM 43247]
 gi|262087244|gb|ACY23212.1| phosphoribosylglycinamide formyltransferase 2 [Gordonia bronchialis
           DSM 43247]
          Length = 604

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 28/107 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +  +   S+     A + +  P  VVK  + + G+G+               V  S
Sbjct: 180 GLPTSPYLFADSLAELRVAAEQIGYPC-VVKPVMSSSGKGQS--------------VVKS 224

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRV--NCVYVEDGADILRELYL 120
              + S             QT  +G RV    V VE   +   E+ L
Sbjct: 225 PDDLESA-----------WQTAASGGRVRSERVIVEGFVEFDYEITL 260


>gi|330873662|gb|EGH07811.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 431

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLTEAEDAVRDMLA----GNAFGEAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|298374082|ref|ZP_06984040.1| phosphoribosylamine--glycine ligase [Bacteroides sp. 3_1_19]
 gi|298268450|gb|EFI10105.1| phosphoribosylamine--glycine ligase [Bacteroides sp. 3_1_19]
          Length = 423

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVISS--VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++++P A+   IS+  +    + +++L  P YV+K+   A G+           
Sbjct: 110 AKAFMMRHHIPTARYKSISTENLEEGYAFLESLSAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++ ++LG           G     V +E+  D
Sbjct: 158 ---GVLIIDNLEEAKKELGDMLGGMF--------GDASKTVVIEEFLD 194


>gi|254285192|ref|ZP_04960158.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150425195|gb|EDN16972.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 893

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESDNIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|145411512|gb|ABP68414.1| aminoimidazole ribonucleotide carboxylase [Physcomitrella patens]
          Length = 704

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 15/120 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA-GGRGKGRFKE-----LPAD 65
            +K++V + + + I S   AE A K    P  ++KS+  A  GRG    +      L   
Sbjct: 231 FKKHDVALPEFMKIDSAEEAEEAGKLFGYP-LMLKSRRDAYDGRGNAVVESREALPLAIS 289

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN--------CVYVEDGADILRE 117
           S GG+      +     ++E+       +        V         C  VE  A I +E
Sbjct: 290 SLGGIERCLYAEKWAPFVKELAIMVARGRDGSIRSFPVVETTHVSNICHTVEAPARIPKE 349


>gi|4028156|gb|AAC96120.1| glycinamide ribonucleotide transformylase [Takifugu rubripes]
          Length = 1008

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A+    +    A + I+T   P  VVK+   A G+             
Sbjct: 110 SKAFMERHGIPTARYGSFTDPREACNFIRTADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V +        + +I+
Sbjct: 157 -GVIVAADQDEACQAVMDIM 175


>gi|325125763|gb|ADY85093.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
 gi|325125814|gb|ADY85144.1| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 824

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K L+ +   PVAK VV++ V  A +  K +  P+ V  +    G
Sbjct: 79  KNLMERIGEPVAKSVVVNYVEDAIAFAKEIGYPVVVRPAYTLGG 122


>gi|289522764|ref|ZP_06439618.1| carbamoyl-phosphate synthase, large subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289504600|gb|EFD25764.1| carbamoyl-phosphate synthase, large subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 1042

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGG 53
            +L K ++P   G    ++  A    + L  P+ +  S +  G 
Sbjct: 664 DILHKLDIPYPPGEAARNLKEAVDIAERLGFPVMIRPSFVIGGV 707


>gi|188589098|ref|YP_001920438.1| phosphoribosylamine--glycine ligase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188499379|gb|ACD52515.1| phosphoribosylamine--glycine ligase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 416

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+    ++V+ A   ++    P  VVK+   A G+             
Sbjct: 106 SKDFMKKYGVKTAEYATFTNVNEALKYLENCTYPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +  I  +       ++       G     + +E+  + +    LS+ 
Sbjct: 152 -GVIICENKEEAIEAVNTC----MVDDAFNGAGQ---KIVIEEFLEGVEASILSIT 199


>gi|156318795|ref|XP_001618114.1| hypothetical protein NEMVEDRAFT_v1g68545 [Nematostella vectensis]
 gi|156197477|gb|EDO26014.1| predicted protein [Nematostella vectensis]
          Length = 235

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 23/126 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVH-AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +K  + K+N+P AK    +S       A      P YV+K+   A G+            
Sbjct: 110 SKVFMEKHNIPTAKYKSFTSATLEEGKAFLETFNPPYVLKADGLAAGK------------ 157

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             GV +  SL+    ++ E+L +          G+  + V +E+  D   EL + +L D 
Sbjct: 158 --GVLILDSLEEAKVELEEMLSNQKF-------GAASSTVVIEEFLD-GIELSVFVLTDG 207

Query: 127 TSGMVA 132
            S  + 
Sbjct: 208 KSYKIL 213


>gi|28899672|ref|NP_799277.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838912|ref|ZP_01991579.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           AQ3810]
 gi|260363988|ref|ZP_05776722.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus K5030]
 gi|260878141|ref|ZP_05890496.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           AN-5034]
 gi|260897896|ref|ZP_05906392.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           Peru-466]
 gi|260902151|ref|ZP_05910546.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           AQ4037]
 gi|31076888|sp|Q87KS8|PUR2_VIBPA RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|28807924|dbj|BAC61161.1| phosphoribosylamine-glycine ligase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747620|gb|EDM58544.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           AQ3810]
 gi|308085551|gb|EFO35246.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           Peru-466]
 gi|308090224|gb|EFO39919.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           AN-5034]
 gi|308110162|gb|EFO47702.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus
           AQ4037]
 gi|308115546|gb|EFO53086.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus K5030]
 gi|328471096|gb|EGF42002.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus 10329]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|303253786|ref|ZP_07339921.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307248457|ref|ZP_07530477.1| Glutathione synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302647370|gb|EFL77591.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306855025|gb|EFM87208.1| Glutathione synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 757

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K +L K    V K V  +SV  A +      G   V+K +    G G   F++   D 
Sbjct: 494 KKVLAKAGFNVPKSVEFTSVEQAVAHYPLFEGKAVVIKPKSTNYGLGIAIFQQGVTDK 551


>gi|270265440|ref|ZP_06193699.1| phosphoribosylamine--glycine ligase [Serratia odorifera 4Rx13]
 gi|270040633|gb|EFA13738.1| phosphoribosylamine--glycine ligase [Serratia odorifera 4Rx13]
          Length = 431

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + +++   P+ V+K+   A G+              
Sbjct: 113 KDFLARHNIPSAEYQNFTDVEPALAYVRSKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 158 GVIVAMTLQEAEDAVQDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VVPM 213


>gi|297564914|ref|YP_003683886.1| lysine biosynthesis enzyme LysX [Meiothermus silvanus DSM 9946]
 gi|296849363|gb|ADH62378.1| lysine biosynthesis enzyme LysX [Meiothermus silvanus DSM 9946]
          Length = 281

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           L  + VP  +  + +    A   I+ +  P+ V+K  + + GR
Sbjct: 96  LEAHGVPQPRTALATEAEEALKLIEAMGYPV-VMKPVVGSWGR 137


>gi|225175802|ref|ZP_03729795.1| Glutathione synthase [Dethiobacter alkaliphilus AHT 1]
 gi|225168726|gb|EEG77527.1| Glutathione synthase [Dethiobacter alkaliphilus AHT 1]
          Length = 962

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +  +PV  G V   +  A+  +K +  P+ V  +   AG  G G   +       
Sbjct: 238 KDFLEQCGLPVPMGKVFRDLEKAKQYLKQIERPVVVKPA---AGLNGTGVTVD------- 287

Query: 69  GVRVESSLKSVISDIREILGSTLITK 94
            VR ES+L++     +    S +I +
Sbjct: 288 -VRTESALETAWEYAKRYHSSVVIEE 312


>gi|164659702|ref|XP_001730975.1| hypothetical protein MGL_1974 [Malassezia globosa CBS 7966]
 gi|159104873|gb|EDP43761.1| hypothetical protein MGL_1974 [Malassezia globosa CBS 7966]
          Length = 1143

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  +PVA+   +S+V  A  A   +  P+ V  +    G
Sbjct: 191 LDQIQIPVARSEAVSTVKEALRAADEIGYPVIVRAAYALGG 231


>gi|146304739|ref|YP_001192055.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera sedula DSM
           5348]
 gi|145702989|gb|ABP96131.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera sedula DSM
           5348]
          Length = 281

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            L R   +PV + ++  S  +   A + +  P  + K  I + GR     +++    
Sbjct: 93  KLFR-AGIPVPQSIIAMSPDSVMKAYEQIGFP-LIDKPPIGSWGRMVSLIRDIIEGK 147


>gi|294634931|ref|ZP_06713449.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685]
 gi|291091640|gb|EFE24201.1| acetyltransferase, GNAT family [Edwardsiella tarda ATCC 23685]
          Length = 890

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   + +L  Y +    G + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHE--VRDILACYGLETLPGWIANDSAEAVHIAERVGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              +  +G +    + + V      I       +Q  P  +R+  + V+  A+    +EL
Sbjct: 530 AHHSAIQGVMLYLRNAQEVEQAANAIFDR---ARQAYPQ-ARIFGLLVQSSANRIGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            + +  D   G +  +   +GG   + 
Sbjct: 586 RICVEHDAVFGPLILLG--EGGAQWDS 610


>gi|115386238|ref|XP_001209660.1| phosphoribosylformylglycinamidine cyclo-ligase [Aspergillus terreus
           NIH2624]
 gi|114190658|gb|EAU32358.1| phosphoribosylformylglycinamidine cyclo-ligase [Aspergillus terreus
           NIH2624]
          Length = 815

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++N+P A          A   + ++   + V+K+   AGG+             
Sbjct: 115 SKDFMKRHNIPTAAYENFYEYEPARKYLDSVSHNV-VIKADGLAGGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV +  + +     +RE+    ++  Q G  G   N V +E+
Sbjct: 161 -GVIIPQTKEEAHQALREM----MLDHQFGEAG---NEVVIEE 195


>gi|85708071|ref|ZP_01039137.1| AccC, acetyl-CoA carboxylase, biotin carboxylase [Erythrobacter sp.
           NAP1]
 gi|85689605|gb|EAQ29608.1| AccC, acetyl-CoA carboxylase, biotin carboxylase [Erythrobacter sp.
           NAP1]
          Length = 449

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 7   QAKALLRKYNVP-VAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG----KGRFK 60
           QAK    +  +P V      +S    A+     +  P+ ++K+    GGRG    +   K
Sbjct: 119 QAKKTAGELGLPLVPGSDGAVSDPEEAKKIAAEIGYPV-IIKAASGGGGRGMKVCESEDK 177

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGS 89
                 + G   +++       I + LG+
Sbjct: 178 LETLMKQAGSEAKAAFGDATVYIEKYLGN 206


>gi|319935921|ref|ZP_08010345.1| acetyl-CoA carboxylase [Coprobacillus sp. 29_1]
 gi|319809035|gb|EFW05531.1| acetyl-CoA carboxylase [Coprobacillus sp. 29_1]
          Length = 455

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 20/125 (16%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGG-----RGKGRF 59
           +A+ L+++  VPV  G   +I SV   ++    L  P+ +  S    G      + K  F
Sbjct: 118 EARKLMKEAGVPVIPGSKEIIDSVEHGQNIAVDLGYPVMIKASNGGGGRGMRIIQNKEEF 177

Query: 60  KELPADSKGGVRVESSLKSV-------------ISDIREILGSTLITKQTGPTGSRVNCV 106
           ++   ++K   +       V             +  + +  G  +   +   +  R +  
Sbjct: 178 EKQYQNAKSEAKACFGDDEVYLEKYIENPKHIEVQVVGDQYGHVIHLFERDCSFQRRHQK 237

Query: 107 YVEDG 111
            +E+ 
Sbjct: 238 MIEEA 242


>gi|301115336|ref|XP_002905397.1| methylcrotonoyl-CoA carboxylase subunit alpha, putative
           [Phytophthora infestans T30-4]
 gi|262110186|gb|EEY68238.1| methylcrotonoyl-CoA carboxylase subunit alpha, putative
           [Phytophthora infestans T30-4]
          Length = 682

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K ++ K  VPV  G      S    +   + +  P+ + K+ +  GG+G
Sbjct: 144 SKDIMIKAGVPVTPGYHGADQSFETLQKEAEKIGYPVLI-KAVLGGGGKG 192


>gi|237744482|ref|ZP_04574963.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 7_1]
 gi|229431711|gb|EEO41923.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 7_1]
          Length = 426

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  AK    +    A   +  +  P+ V+K+   A G+             
Sbjct: 106 AKEFMKKYGVKTAKYQSFTDKEKAIKYLDEMSYPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + K   + + ++    +  K     G     V +E+  D +    +S+L    
Sbjct: 152 -GVIIAQNRKEAENALNDM----MTNKVFAAAG---ETVVIEEFLDGVE---ISVLSITD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SEVIIPFISAKDHKKISE 218


>gi|153007874|ref|YP_001369089.1| phosphoribosylamine--glycine ligase [Ochrobactrum anthropi ATCC
           49188]
 gi|151559762|gb|ABS13260.1| phosphoribosylamine--glycine ligase [Ochrobactrum anthropi ATCC
           49188]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 50/232 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++++P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDLCARFDIPTGAYGRFNNAPKAKAYIRQQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   +  +             G  G+ V    VE+  D     +  +  D  +
Sbjct: 152 GVIVAMTLDEALDAVDACF-----EGAFGSAGAEV---VVEEFLDGEEASFFCI-CDGKT 202

Query: 129 GMVAFIASTQGGMDIEE------------------VAKDYPQKIFKLLIDPLIGVTSEDV 170
            +   + S Q    + +                  +  +  ++  + LI+P +   +E  
Sbjct: 203 ALP--LGSAQDHKRVGDGDTGPNTGGMGAYAPAPVMTPEIVERTMRELIEPTMRGMAEIG 260

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
           A    +L L      DG  L         +      E   L++  N  L  L
Sbjct: 261 APFSGILFLGLMIGKDGPKLIE------YNTRFGDPECQVLMMRLNSDLLAL 306


>gi|14591154|ref|NP_143230.1| GMP synthase subunit B [Pyrococcus horikoshii OT3]
 gi|13626774|sp|O59072|GUAAB_PYRHO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|119389212|pdb|2DPL|A Chain A, Crystal Structure Of The Gmp Synthase From Pyrococcus
           Horikoshii Ot3
 gi|119389213|pdb|2DPL|B Chain B, Crystal Structure Of The Gmp Synthase From Pyrococcus
           Horikoshii Ot3
 gi|188036150|pdb|2Z0C|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|188036151|pdb|2Z0C|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|254574796|pdb|3A4I|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|254574797|pdb|3A4I|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|3257770|dbj|BAA30453.1| 308aa long hypothetical GMP synthase [Pyrococcus horikoshii OT3]
          Length = 308

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A K +   L+ V        +G+  F       + G+ +         D +
Sbjct: 31  VDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHY------VDAQ 84

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
           +   S L          ++   V++E   ++ +++    L+  T     +I S QG +  
Sbjct: 85  DRFFSALKGVTDPEEKRKIIGRVFIEVFEEVAKKIGAEYLIQGTIA-PDWIES-QGKIKS 142

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+K+   LI+PL  +  ++V  L   L L 
Sbjct: 143 HHNVGGLPEKLNLKLIEPLRDLYKDEVRELAKFLGLP 179


>gi|330993912|ref|ZP_08317842.1| Carbamoyl-phosphate synthase large chain [Gluconacetobacter sp.
           SXCC-1]
 gi|329758858|gb|EGG75372.1| Carbamoyl-phosphate synthase large chain [Gluconacetobacter sp.
           SXCC-1]
          Length = 1084

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +QA   L +  +      +  +   AE+  + +  P+ V  S +  G
Sbjct: 683 FQAM--LHRLGLRQPANGIARNPAEAEAVAEKIGYPVVVRPSYVLGG 727


>gi|317487015|ref|ZP_07945823.1| CoA-binding domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316921697|gb|EFV42975.1| CoA-binding domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 806

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 21/116 (18%)

Query: 295 NFLDVGGGADQDKVAAAFKIITSDSSVKGILIN------IFGGIMRCDVLV------KGI 342
           N LD+  GAD +  A   +++ +D ++  ++I       +   +   D+         GI
Sbjct: 675 NPLDINPGADDEVHAYMAELLLNDENIDAVVIGLDPLSPVTHSLAETDIDAFRMDAPDGI 734

Query: 343 LSAVKEV--KINIPLVMRLEGAN-VDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           L+ + +V  + + P+V  ++G    +   + + E G+ V    D      + V A+
Sbjct: 735 LTLLSDVRSRTSKPMVAVMDGGEKFEPLRKALRERGIPVFPVCD------RAVAAL 784


>gi|307250675|ref|ZP_07532612.1| Glutathione synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306857283|gb|EFM89402.1| Glutathione synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 757

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K +L K    V K V  +SV  A +      G   V+K +    G G   F++   D 
Sbjct: 494 KKVLAKAGFNVPKSVEFTSVEQAVAHYPLFEGKAVVIKPKSTNYGLGIAIFQQGVTDK 551


>gi|301758106|ref|XP_002914903.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like, partial [Ailuropoda melanoleuca]
          Length = 704

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 153 ESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 197

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 198 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 250

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    V      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 251 DKHGNAVWL---NERECSIQRRNQKVVEEAPSIFLDSKTRRAMGEQAVALAKAVKYSSAG 307

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 308 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 340


>gi|227546276|ref|ZP_03976325.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|296453749|ref|YP_003660892.1| phosphoribosylaminoimidazole carboxylase [Bifidobacterium longum
           subsp. longum JDM301]
 gi|312133117|ref|YP_004000456.1| purt [Bifidobacterium longum subsp. longum BBMN68]
 gi|227213257|gb|EEI81129.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|291517205|emb|CBK70821.1| formate-dependent phosphoribosylglycinamide formyltransferase
           [Bifidobacterium longum subsp. longum F8]
 gi|296183180|gb|ADH00062.1| Phosphoribosylaminoimidazole carboxylase [Bifidobacterium longum
           subsp. longum JDM301]
 gi|311774114|gb|ADQ03602.1| PurT [Bifidobacterium longum subsp. longum BBMN68]
          Length = 445

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 158 GLPTTPYRFAGSLEELRAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 205

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 206 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 255

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 256 PIGQRQESGDYRESWQPATE 275


>gi|206901331|ref|YP_002251484.1| carbamoyl-phosphate synthase, large subunit [Dictyoglomus
           thermophilum H-6-12]
 gi|206740434|gb|ACI19492.1| carbamoyl-phosphate synthase, large subunit [Dictyoglomus
           thermophilum H-6-12]
          Length = 1054

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L++  +P  KG  I S+  A+  I+ +  P+ +  S +  G
Sbjct: 673 LKRNKIPRPKGFYIRSLEEAKEVIEEIGFPVLLRPSYVLGG 713


>gi|172038188|ref|YP_001804689.1| acetyl-CoA carboxylase biotin carboxylase subunit [Cyanothece sp.
           ATCC 51142]
 gi|171699642|gb|ACB52623.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Cyanothece sp.
           ATCC 51142]
          Length = 451

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 36/275 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++ +   A    + +  P+ ++K+    GGRG    +E    
Sbjct: 121 AKKTMQKAGVPTVPGSAGLLDNEEEALKVARDVGYPV-MIKATAGGGGRGMRLVREESEF 179

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           S+     +   ++  ++                       VY+E   +  R +   +L D
Sbjct: 180 SRLFQAAQGEAEAAFANAG---------------------VYLEKFIERPRHIEFQILAD 218

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     + P L     E        +   G   
Sbjct: 219 SYGN---VIHLGERDCSIQRRHQKLLEEAPSPFLTPQLRKKMGEAAVKAAKSINYVGAGT 275

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D   N Y  F + +  +   +P+  M  G  L     +I+  +   ++  +I   
Sbjct: 276 VEFLVDNQGNFY--FMEMNTRIQVEHPVTEMITGLDLITEQIRIAQGEKLQFKQSEIAL- 332

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI-GCMVNGA 276
                     I A+  +L++    G I G +  G 
Sbjct: 333 --KGHAIECRINAEDPDLNFRPHPGKISGYLPPGG 365


>gi|170763907|ref|ZP_02634980.2| putative glutamate--cysteine ligase [Clostridium perfringens B str.
           ATCC 3626]
 gi|170712453|gb|EDT24635.1| putative glutamate--cysteine ligase [Clostridium perfringens B str.
           ATCC 3626]
          Length = 778

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYENIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFPGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|160899191|ref|YP_001564773.1| acetyl-CoA carboxylase, biotin carboxylase [Delftia acidovorans
           SPH-1]
 gi|160364775|gb|ABX36388.1| acetyl-CoA carboxylase, biotin carboxylase [Delftia acidovorans
           SPH-1]
          Length = 682

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  K  V    G    I+   AA    K +  P+ +  S                  
Sbjct: 119 SKKLADKAGVSTIPGYNDPIAGPEAAVEIAKGIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K               +          + +++E      R + + +L D
Sbjct: 164 GGKGLRVAYNDKEAFEGFASCQNEARNSFGD-------DRIFIEKFVQEPRHIEIQVLGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     I D       E   +L   +  Q    
Sbjct: 217 GHGN---VIYLNERECSIQRRHQKVIEEAPSPFISDATRRAMGEQAVALAKAVGYQSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             D+D   LE+N
Sbjct: 274 VEFV--------VGKDQDFYFLEMN 290


>gi|83313341|ref|YP_423605.1| Acetyl/propionyl-CoA carboxylase, alpha subunit [Magnetospirillum
           magneticum AMB-1]
 gi|82948182|dbj|BAE53046.1| Acetyl/propionyl-CoA carboxylase, alpha subunit [Magnetospirillum
           magneticum AMB-1]
          Length = 663

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 28/177 (15%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L R+  V    G   VI     A    + +  P+                 K    
Sbjct: 118 ESKKLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVM---------------LKASAG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  +            G T  T +   +    + V+VE   +  R + + +L 
Sbjct: 163 GGGKGMRLAWNDAEAHE------GFTSATNEAKTSFGD-DRVFVEKFIEQPRHIEIQVLA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQ 180
           D     +      +    I+   +   ++     + P       E   +L  ++  +
Sbjct: 216 DGQGTTLYL---GERECSIQRRHQKVIEEAPSPFLTPETRKAMGEQACALARIVNYK 269


>gi|15603370|ref|NP_246444.1| carbamoyl phosphate synthase large subunit [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|22095528|sp|Q9CKV0|CARB_PASMU RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|12721891|gb|AAK03589.1| CarB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 1068

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 42/159 (26%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  ++  A +A   +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSTPKSFVCHTLEEAWAAQSEVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +     +               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFYAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIIV-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|296131892|ref|YP_003639139.1| carbamoyl-phosphate synthase, large subunit [Thermincola sp. JR]
 gi|296030470|gb|ADG81238.1| carbamoyl-phosphate synthase, large subunit [Thermincola potens JR]
          Length = 1071

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LLR   +P ++G    +V  A+   + L  P+ V  S +  G
Sbjct: 674 RLLRTLAIPQSEGKTAFTVKEAQEIAEKLGYPVLVRPSYVLGG 716


>gi|291484034|dbj|BAI85109.1| pyruvate carboxylase [Bacillus subtilis subsp. natto BEST195]
          Length = 1148

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 70/210 (33%), Gaps = 35/210 (16%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+    K  +PV  G      ++ A E   +    P+ ++K+ +  GGRG          
Sbjct: 124 AREQAEKAGIPVIPGSDGPAETLEAVEQFGQANGYPI-IIKASLGGGGRGM--------- 173

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               VR ES +K      +    +     +          VYVE   +  + + + ++ D
Sbjct: 174 --RIVRSESEVKEAYERAKSEAKAAFGNDE----------VYVEKLIENPKHIEVQVIGD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           +   +V      +    ++   +   +    + + P   +  +   +   + +       
Sbjct: 222 KQGNVVHLF---ERDCSVQRRHQKVIEVAPSVSLSPE--LRDQICEAAVALAKNVNYINA 276

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
              +          + +   +E+NP + ++
Sbjct: 277 GTVEFLVA------NNEFYFIEVNPRVQVE 300


>gi|288553133|ref|YP_003425068.1| carbamoyl phosphate synthase large subunit [Bacillus pseudofirmus
           OF4]
 gi|288544293|gb|ADC48176.1| carbamoyl phosphate synthase large subunit [Bacillus pseudofirmus
           OF4]
          Length = 1089

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 40/189 (21%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q +AL+ + N PV +  ++ +V  A+  ++ +  P+ V  +    G             +
Sbjct: 131 QFRALMNELNEPVPESEIVHTVEEAQVFVRKIGYPIIVRPAYTLGG-------------T 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GG+    + + +I  +            +G   S V    VE      +E+   ++ D 
Sbjct: 178 GGGI--VHNDEELIEIVS-----------SGLKYSPVTQCLVEKSIAGFKEVEYEVMRDA 224

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLEL 179
           +   +          ++E            ++  P   +T  D          +   L +
Sbjct: 225 SDQAIVV-------CNMENFDPVGVHTGDSIVFAPSQTLTDRDYQMLRNSSLKIIRALGI 277

Query: 180 QGQARIDGG 188
           +G   +   
Sbjct: 278 EGGCNVQFA 286


>gi|288802452|ref|ZP_06407891.1| phosphoribosylamine--glycine ligase [Prevotella melaninogenica D18]
 gi|288334980|gb|EFC73416.1| phosphoribosylamine--glycine ligase [Prevotella melaninogenica D18]
          Length = 422

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++++N+P A       +++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKAFMKRHNIPTAAYETFDGTTIEEGMRFLETLKAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++RE+LG           G+    V +E+   
Sbjct: 158 ---GVLILPTLEEAKKELREMLGGMF--------GNASAKVVIEEFLS 194


>gi|312195047|ref|YP_004015108.1| CoA-binding domain protein [Frankia sp. EuI1c]
 gi|311226383|gb|ADP79238.1| CoA-binding domain protein [Frankia sp. EuI1c]
          Length = 878

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 23/66 (34%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL  Y V V   V + S  AA  A   L  P  +         R +   + L    +  
Sbjct: 654 ALLACYGVEVEPMVKVDSADAAVEAASRLGWPAVLKARSRPYRHRPELGGQRLGLLDEAA 713

Query: 70  VRVESS 75
           VR   +
Sbjct: 714 VRAAWA 719


>gi|229527571|ref|ZP_04416962.1| protein acetyltransferase [Vibrio cholerae 12129(1)]
 gi|229333933|gb|EEN99418.1| protein acetyltransferase [Vibrio cholerae 12129(1)]
          Length = 893

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNQSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKINIPLVMRL 359
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++        +  
Sbjct: 354 GDADHQRYVSTLNILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHPRAKRFNILT 413

Query: 360 EGANV---DIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396
             +          L  ++G+   T    + A    +H V+
Sbjct: 414 NWSGELSAKPARTLFNQAGIP--TYRTPESAVTAFMHLVE 451


>gi|229552614|ref|ZP_04441339.1| phosphoribosylaminoimidazole carboxylase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539986|ref|YP_003174485.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Lactobacillus rhamnosus Lc 705]
 gi|229314034|gb|EEN80007.1| phosphoribosylaminoimidazole carboxylase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151662|emb|CAR90634.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Lactobacillus rhamnosus Lc 705]
          Length = 371

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGP 41
           K  L+ + VPV   V +    A  +AI+ +  P
Sbjct: 111 KTFLQTHGVPVTPFVAVDRPEALTAAIEKIGLP 143


>gi|299821733|ref|ZP_07053621.1| carbamoyl-phosphate synthase, large subunit [Listeria grayi DSM
           20601]
 gi|299817398|gb|EFI84634.1| carbamoyl-phosphate synthase, large subunit [Listeria grayi DSM
           20601]
          Length = 1069

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L K  +P  +G   +SV  A +  + +  P+ V  S +  G
Sbjct: 674 LEKLAIPQPEGKTATSVEEALTIARQIGYPVLVRPSYVLGG 714



 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 21/47 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV    +I ++  A+  ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPDSDIIHNLEEAKRFVERIGYPVIVRPAYTLGGSGG 179


>gi|300361814|ref|ZP_07057991.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus gasseri
           JV-V03]
 gi|300354433|gb|EFJ70304.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus gasseri
           JV-V03]
          Length = 1062

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCKKLGEPVPPSRTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    + + +    +  L  + +T+     
Sbjct: 180 GI--CHNHEELAEIAKNGLELSPVTECLIEK 208


>gi|28475305|emb|CAD67775.1| GART protein [Tetraodon nigroviridis]
 gi|42557842|emb|CAF28785.1| GART protein [Tetraodon nigroviridis]
          Length = 992

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A+    +    A + I++   P  VVK+   A G+             
Sbjct: 110 SKAFMERHGIPTARYGSFTDPQEACNFIRSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V +        + +I+
Sbjct: 157 -GVVVAADRDEACRAVMDIM 175


>gi|23465674|ref|NP_696277.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           longum NCC2705]
 gi|322688713|ref|YP_004208447.1| phosphoribosylglycinamide formyltransferase [Bifidobacterium longum
           subsp. infantis 157F]
 gi|322690699|ref|YP_004220269.1| phosphoribosylglycinamide formyltransferase [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|23326351|gb|AAN24913.1| probable phosphoribosylglycinamide formyltransferase 2
           [Bifidobacterium longum NCC2705]
 gi|320455555|dbj|BAJ66177.1| phosphoribosylglycinamide formyltransferase [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320460049|dbj|BAJ70669.1| phosphoribosylglycinamide formyltransferase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 447

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 160 GLPTTPYRFAGSLEELRAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 207

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 208 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 257

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 258 PIGQRQESGDYRESWQPATE 277


>gi|47220966|emb|CAF98195.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A+    +    A + I++   P  VVK+   A G+             
Sbjct: 110 SKAFMERHGIPTARYGSFTDPQEACNFIRSADFPALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V +        + +I+
Sbjct: 157 -GVVVAADRDEACRAVMDIM 175


>gi|14591299|ref|NP_143377.1| hypothetical protein PH1517 [Pyrococcus horikoshii OT3]
 gi|3257942|dbj|BAA30625.1| 460aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 460

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 58/181 (32%), Gaps = 19/181 (10%)

Query: 228 FDDNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIK 287
           F    + R L I E  D +   S   E +  N+  I   G IG M   A           
Sbjct: 272 FKQTGVLRALTIGEAFDWARALSNLPEPQGENVVIITNGGGIGVMATDAAEEEGLHLYDD 331

Query: 288 LYGGAP-ANFL----------DVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRC 335
           L      AN +          D+ G AD      A +   +   +  I++      ++  
Sbjct: 332 LEQLKIFANHMPPFGSYKNPVDLTGMADAKSYEGAIRDALAHPDMHSIIVLYCQTAVLDP 391

Query: 336 DVLVKGILSAVKEVKINIPLVMRL-EGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
             L   I+    E     PLV+ +  G        ++ E+G+            ++ V A
Sbjct: 392 RELADVIIREYNESGRKKPLVVAIVGGIEAKQAIDVLNENGIPAYPEP------ERAVKA 445

Query: 395 V 395
           +
Sbjct: 446 L 446


>gi|310823842|ref|YP_003956200.1| d-ala d-ala ligase domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396914|gb|ADO74373.1| D-ala D-ala ligase domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 374

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LLR   +      V+  +   ++    LP PL V  +   A         +  +  +
Sbjct: 113 AKELLRARGISTPAFAVVKRLEDVKAV--DLPYPLIVKPAHEDA-----SMGVDFDSVVE 165

Query: 68  GGVRVESSLKSVISDIRE 85
           G  ++  +   V+S   +
Sbjct: 166 GPAQLARAAAEVLSTFHQ 183


>gi|303250870|ref|ZP_07337063.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253065|ref|ZP_07534948.1| Glutathione synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302650285|gb|EFL80448.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306859434|gb|EFM91464.1| Glutathione synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 757

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K +L K    V K V  +SV  A +      G   V+K +    G G   F++   D 
Sbjct: 494 KKVLAKAGFNVPKSVEFTSVEQAVAHYPLFEGKAVVIKPKSTNYGLGIAIFQQGVTDK 551


>gi|302308763|ref|NP_985801.2| AFR254Cp [Ashbya gossypii ATCC 10895]
 gi|299790783|gb|AAS53625.2| AFR254Cp [Ashbya gossypii ATCC 10895]
          Length = 793

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++++P A+     +   A + I  +   + V+K+   A G+             
Sbjct: 114 SKDFMARHDIPTARYANFDNYDEARAHIDAVDYRI-VLKADGVAAGK------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV + ++    +      L + ++ KQ G  G   + V +E+  +
Sbjct: 160 -GVLLPTTKAEAVEA----LDAIMVQKQFGAAG---DSVVIEEFLE 197


>gi|296481629|gb|DAA23744.1| propionyl-CoA carboxylase alpha chain, mitochondrial [Bos taurus]
          Length = 715

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   +      
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDSETRRAMGEQAVALAKAVNYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|295113098|emb|CBL31735.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
           [Enterococcus sp. 7L76]
          Length = 416

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V         R              
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIV---------RPAFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
              +  + + +       L  + +T+     
Sbjct: 181 ---MCDTEEELRQIAENGLKLSPVTQCLIEK 208


>gi|241895144|ref|ZP_04782440.1| carbamoyl-phosphate synthase large subunit [Weissella
           paramesenteroides ATCC 33313]
 gi|241871640|gb|EER75391.1| carbamoyl-phosphate synthase large subunit [Weissella
           paramesenteroides ATCC 33313]
          Length = 1058

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + N PV + ++  +V  A S  +T   P+ V  +    G             + G
Sbjct: 133 KNLMTRLNEPVPESMIAVTVAQALSFAETNGYPVIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++   + +               G   S V  V +E      +E+   ++ D  +
Sbjct: 180 GI--ANNEAELQTIAAN-----------GLELSPVTQVLIEQSIAGYKEIEFEVMRD-AA 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQGQAR 184
                +AS +   + + V       I    +    D  + +  +    +   L+++G   
Sbjct: 226 DNALIVASME---NFDPVGIHTGDSIVVAPVQTLSDRELQMMRDAALKIIRALKIEGGVN 282

Query: 185 IDGG 188
           I   
Sbjct: 283 IQMA 286


>gi|311739898|ref|ZP_07713732.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304971|gb|EFQ81040.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 402

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 66/204 (32%), Gaps = 39/204 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L     PV +   I SV  A +    + G +  +K++   G  GKG +            
Sbjct: 125 LAALGAPVPRFAAIDSVADARAFFDAVDGRVC-LKAR-RGGYDGKGVW------------ 170

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +  +    + E+L            G+    +  E+  ++ RE  LS+LV   +   
Sbjct: 171 -FPTADNCFELVSELL----------EAGTP---LMAEEKVELTRE--LSILV---ARRP 211

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
               S +  +     ++     I    I P  G+T E        L L     +    + 
Sbjct: 212 ----SGEAKVWPITQSRQ-ENGICAEAIAPAPGLTPELSQR-ASELGLSIAESLGVTGVL 265

Query: 192 PNLYKAFCDKDMSLLEINPLIIMK 215
                AF   +   + +N L +  
Sbjct: 266 AVELFAFDGPEGEDISVNELAMRP 289


>gi|167042342|gb|ABZ07070.1| putative D-ala D-ala ligase [uncultured marine crenarchaeote
           HF4000_ANIW97M7]
          Length = 269

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           LL+K N+P  K     S  AA   +  +  P  V+K  I + GR
Sbjct: 81  LLKKNNIPTPKTYFSFSADAARENLDRVGYP-LVIKPLIGSWGR 123


>gi|58427104|gb|AAW76141.1| carbamoyl-phosphate synthase large chain [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 1090

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 139 RELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 189

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 190 G------IAYNREELIEIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 231

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 232 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 277


>gi|50086599|ref|YP_048109.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Acinetobacter sp. ADP1]
 gi|49532573|emb|CAG70287.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Acinetobacter sp. ADP1]
          Length = 383

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           + E   K L R  ++PVA    + S+ + + A+  L  P+ V+K+    G  GKG+F 
Sbjct: 109 LLE---KELFRHLDIPVAPFQAVDSLESLKEAVHILGLPI-VLKT-ATGGYDGKGQFV 161


>gi|330938360|gb|EGH41988.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 431

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  SL      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMSLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|297845912|ref|XP_002890837.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336679|gb|EFH67096.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1183

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 52/171 (30%), Gaps = 36/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      +      + +++       + +     +++     GG G G       
Sbjct: 216 RELFKEAMKNIGLKTPPSGIGNTLDECFDIAERIGEFPLIIRPAFTLGGTGGG------- 268

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +   S  +  L +++ +            V VE      +E  L ++ 
Sbjct: 269 -------IAYNKEEFESICKAGLAASVTS-----------QVLVEKSLLGWKEYELEVMR 310

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE +          + + P   +T  +   L D
Sbjct: 311 D-LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDREYQRLRD 354


>gi|262368317|ref|ZP_06061646.1| biotin carboxylase [Acinetobacter johnsonii SH046]
 gi|262315995|gb|EEY97033.1| biotin carboxylase [Acinetobacter johnsonii SH046]
          Length = 453

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 12  LRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           +RK  VP V       +   A +  K +  P  +VK+    GGRG    + +        
Sbjct: 123 MRKAGVPTVPGSANAVTPQNALAEAKEIGFP-LIVKAASGGGGRGMRIVERVDT------ 175

Query: 71  RVESSLKSVISDIREILG-STLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +  S+++   D     G  T+  ++   T   V    + DG      LY
Sbjct: 176 -LLESVQAAQRDAEMWFGDDTVYMERFLQTPRHVEVQVLADGNGHAIHLY 224


>gi|213850141|ref|ZP_03381039.1| phosphoribosylamine--glycine ligase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 276

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|169630699|ref|YP_001704348.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Mycobacterium abscessus ATCC 19977]
 gi|169242666|emb|CAM63694.1| Probable phosphoribosylaminoimidazole carboxylase PurK
           [Mycobacterium abscessus]
          Length = 401

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 75/224 (33%), Gaps = 59/224 (26%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR    PV     I +V   E         + V+K+ +  G  G+            GV 
Sbjct: 111 LRDIGAPVPGFADIRAVSDVERFAAETGSHV-VLKA-VRGGYDGR------------GVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  +L    +   E L + +              +  E+  D+ RE  LS +V R     
Sbjct: 157 ITDTLDEARTVAAEQLAAGV-------------ELLAEERVDMRRE--LSAMVAR----- 196

Query: 132 AFIASTQG-GMDIEEVAKDYPQKIFKLLIDPL------IGVTSEDVA-SLCDMLELQGQA 183
               S  G G     V     + I  ++I P       + + +E +A  + + L + G  
Sbjct: 197 ----SPFGQGAAWPVVETVQREGICAVVIAPAPQLPEELALQAEQLALRIANELGVTGCL 252

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSK 225
            ++           F   D  LL +N L +    +G   +  ++
Sbjct: 253 AVE----------LFETNDGRLL-VNELAMRPHNSGHWSMDGAR 285


>gi|57168152|ref|ZP_00367291.1| phosphoribosylamine--glycine ligase [Campylobacter coli RM2228]
 gi|305431701|ref|ZP_07400870.1| phosphoribosylamine-glycine ligase [Campylobacter coli JV20]
 gi|57020526|gb|EAL57195.1| phosphoribosylamine--glycine ligase [Campylobacter coli RM2228]
 gi|304445296|gb|EFM37940.1| phosphoribosylamine-glycine ligase [Campylobacter coli JV20]
          Length = 416

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+ L+KY +  AK +  + +  A++ I +L  P  VVK+     G+              
Sbjct: 105 KSFLKKYRIKTAKFLNTNDIEKAKNFILSL-TPPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  + +  I +  ++L      +  G  G     + VE+  D
Sbjct: 150 GVIIAKTHEEAIEEASKML----SGESFGEAGKL---IVVEEFLD 187


>gi|332799034|ref|YP_004460533.1| phosphoribosylamine--glycine ligase [Tepidanaerobacter sp. Re1]
 gi|332696769|gb|AEE91226.1| Phosphoribosylamine--glycine ligase [Tepidanaerobacter sp. Re1]
          Length = 417

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY +P A   V      A   I T   P  VVK++  A G+             
Sbjct: 106 SKDLMKKYKIPTADYRVFERAQDAADYINTAQMP-LVVKAEGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV +     +    ++ I    +I +  G +G   + + +E+
Sbjct: 152 -GVIIAHDRDTAKEAVKSI----MIDRAFGESG---SRIVIEE 186


>gi|321315247|ref|YP_004207534.1| pyruvate carboxylase [Bacillus subtilis BSn5]
 gi|320021521|gb|ADV96507.1| pyruvate carboxylase [Bacillus subtilis BSn5]
          Length = 1148

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 70/210 (33%), Gaps = 35/210 (16%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+    K  +PV  G      ++ A E   +    P+ ++K+ +  GGRG          
Sbjct: 124 AREQAEKAGIPVIPGSDGPAETLEAVEQFGQANGYPI-IIKASLGGGGRGM--------- 173

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               VR ES +K      +    +     +          VYVE   +  + + + ++ D
Sbjct: 174 --RIVRSESEVKEAYERAKSEAKAAFGNDE----------VYVEKLIENPKHIEVQVIGD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           +   +V      +    ++   +   +    + + P   +  +   +   + +       
Sbjct: 222 KQGNVVHLF---ERDCSVQRRHQKVIEVAPSVSLSPE--LRDQICEAAVALAKNVNYINA 276

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
              +          + +   +E+NP + ++
Sbjct: 277 GTVEFLVA------NNEFYFIEVNPRVQVE 300


>gi|296532782|ref|ZP_06895461.1| carbamoyl-phosphate synthase, large subunit [Roseomonas cervicalis
           ATCC 49957]
 gi|296266890|gb|EFH12836.1| carbamoyl-phosphate synthase, large subunit [Roseomonas cervicalis
           ATCC 49957]
          Length = 1081

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL+   +   +  ++ ++  A    + +  P+ V  S +  G
Sbjct: 685 QLLKSLGLQQPQNGIVRTLEEAVEEAERIGYPVVVRPSYVLGG 727


>gi|241764710|ref|ZP_04762721.1| CoA-binding domain protein [Acidovorax delafieldii 2AN]
 gi|241365828|gb|EER60483.1| CoA-binding domain protein [Acidovorax delafieldii 2AN]
          Length = 700

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 21/61 (34%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           ++E  + ALL ++ +P     +  S   A  A   +  P  V         + +     L
Sbjct: 480 LNEADSLALLARHGIPTVPLRLCHSAQEARDAFDAVGAPAVVKACSAEVPHKSEHGLVAL 539

Query: 63  P 63
            
Sbjct: 540 G 540


>gi|16078550|ref|NP_389369.1| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309356|ref|ZP_03591203.1| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313683|ref|ZP_03595488.1| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318605|ref|ZP_03599899.1| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221322879|ref|ZP_03604173.1| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|46397656|sp|Q9KWU4|PYC_BACSU RecName: Full=Pyruvate carboxylase; AltName: Full=Pyruvic
           carboxylase; Short=PYC
 gi|2633857|emb|CAB13359.1| pyruvate carboxylase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 1148

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 70/210 (33%), Gaps = 35/210 (16%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+    K  +PV  G      ++ A E   +    P+ ++K+ +  GGRG          
Sbjct: 124 AREQAEKAGIPVIPGSDGPAETLEAVEQFGQANGYPI-IIKASLGGGGRGM--------- 173

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               VR ES +K      +    +     +          VYVE   +  + + + ++ D
Sbjct: 174 --RIVRSESEVKEAYERAKSEAKAAFGNDE----------VYVEKLIENPKHIEVQVIGD 221

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           +   +V      +    ++   +   +    + + P   +  +   +   + +       
Sbjct: 222 KQGNVVHLF---ERDCSVQRRHQKVIEVAPSVSLSPE--LRDQICEAAVALAKNVNYINA 276

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
              +          + +   +E+NP + ++
Sbjct: 277 GTVEFLVA------NNEFYFIEVNPRVQVE 300


>gi|300087017|gb|ADJ67785.1| bifunctional purine biosynthetic pathway protein [Pichia
           methanolica]
          Length = 794

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KYN+P A     +    A   I+     L +  S I AG               
Sbjct: 115 SKDFMKKYNIPTADYQNFTDYEEARKYIENTDKSLVIKASGIAAG--------------- 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV + ++ +     I+EI    ++ K  G  G  V    +E+  +      LS+L 
Sbjct: 160 KGVLIPTNKQEAFDAIKEI----MVDKNFGDAGDEV---VIEEFLEGDE---LSILC 206


>gi|296242464|ref|YP_003649951.1| branched-chain acyl-CoA synthetase subunit alpha [Thermosphaera
           aggregans DSM 11486]
 gi|296095048|gb|ADG90999.1| branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit
           ;acetyl-CoA synthetase (ADP-forming) alpha subunit
           [Thermosphaera aggregans DSM 11486]
          Length = 456

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 32/187 (17%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYG- 290
           A ++   I  +R  + ED  ++ A+   L  +        + NG G+ +   D  +L   
Sbjct: 265 AAFKQAGI--IRTYTVEDMFDV-ARAFALQPLPKGDRTIIITNGGGVGVLATDAAELNNV 321

Query: 291 --------------------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFG 330
                               G+P N +D+ G A  D    A K       V  +++    
Sbjct: 322 KLIDPSPELKEKLKASMPWFGSPKNPVDLTGQAVADNYLKALKAALDSKEVDNVVLLYCR 381

Query: 331 -GIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVD-IGNRLIAESGLNVITAIDLDDAA 388
             I+    L K I+   +      P+V    G        R +  +G+    A       
Sbjct: 382 TAILDPRELAKAIVEFYQSNSGGKPIVAGFVGGEDTYEAIRYLNRNGIPAYGAP------ 435

Query: 389 QKIVHAV 395
           ++ V+A+
Sbjct: 436 ERAVYAL 442


>gi|269127661|ref|YP_003301031.1| D-alanine/D-alanine ligase [Thermomonospora curvata DSM 43183]
 gi|268312619|gb|ACY98993.1| D-alanine/D-alanine ligase [Thermomonospora curvata DSM 43183]
          Length = 336

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 15/101 (14%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            +K L R+  VP    ++      A    + +  P  V                +     
Sbjct: 131 MSKRLFRQAGVPTPDWIMA--PATAAEVAERIGFPAIVK------------PNSQGSTIG 176

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVY 107
              V+    L+  I+         ++ ++  P    V  V 
Sbjct: 177 LTVVKAPEQLEEAIATAAAW-DHEVMIERFVPGRELVVGVL 216


>gi|153855901|ref|ZP_01996863.1| hypothetical protein DORLON_02888 [Dorea longicatena DSM 13814]
 gi|149751804|gb|EDM61735.1| hypothetical protein DORLON_02888 [Dorea longicatena DSM 13814]
          Length = 424

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 24/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A   +KT      V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDPAKAIEYLKTEAKFPIVLKADGLALGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +   L+     ++ I    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 153 -GVLICKDLEEAEEGVKTI----MLDKKFGTAG---NEMVIEEFMTGRE---VSVLSFVD 201

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 202 GNTIKTMTSAQD 213


>gi|221066389|ref|ZP_03542494.1| phosphoribosylamine/glycine ligase [Comamonas testosteroni KF-1]
 gi|220711412|gb|EED66780.1| phosphoribosylamine/glycine ligase [Comamonas testosteroni KF-1]
          Length = 430

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 19/121 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++++P A+    +   AA + +  L  P+ V+K+   A G+             
Sbjct: 107 SKDFMARHSIPTAQYETFTDAVAAHAYVDRLGAPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+     +  +L       Q    G+RV    +E+  +   E    +L D  
Sbjct: 153 -GVVVAMSLQEAHDAVDFMLVDNKYGVQHNEGGARV---VIEEFLE-GEEASFIVLCDGK 207

Query: 128 S 128
           +
Sbjct: 208 N 208


>gi|91228712|ref|ZP_01262625.1| phosphoribosylamine--glycine ligase [Vibrio alginolyticus 12G01]
 gi|91187738|gb|EAS74057.1| phosphoribosylamine--glycine ligase [Vibrio alginolyticus 12G01]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|119714149|ref|YP_919291.1| CoA-binding domain-containing protein [Nocardioides sp. JS614]
 gi|119526058|gb|ABL79428.1| CoA-binding domain protein [Nocardioides sp. JS614]
          Length = 693

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL ++ +P+    +  SV  A    ++   P+ V+K+ IHA    K     +     G  
Sbjct: 495 LLAEHGLPLVPWSLCGSVADAVQVAESFGYPV-VLKA-IHADLLHKSDADGVRLGLTG-- 550

Query: 71  RVESSLKSVISDIREIL 87
                   V +    +L
Sbjct: 551 -----PDEVAAAGEFLL 562


>gi|95929151|ref|ZP_01311895.1| carbamoyl-phosphate synthase, large subunit [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134649|gb|EAT16304.1| carbamoyl-phosphate synthase, large subunit [Desulfuromonas
           acetoxidans DSM 684]
          Length = 1085

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    V V +  +  +   A   I+ +  P  +  S    G             + G
Sbjct: 133 KQAMDSIGVAVPRSGLAHNYDEAMVVIEEVGFPAIIRPSFTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+         ++               G   S  + + VE+     +E  L ++ D  +
Sbjct: 180 GIAYNREEYEAMAVA-------------GIDASPTDEILVEESVIGWKEYELEVMRD-LA 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             V  I S      IE            + + P   +T 
Sbjct: 226 DNVVIICS------IENFDAMGVHTGDSITVAPAQTLTD 258



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 69/217 (31%), Gaps = 50/217 (23%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +QA  LL K ++      +  S   AE+  + +  P+ V  S +  GGR           
Sbjct: 689 FQA--LLHKLDLKQPANGLARSFEEAETIAEQIGYPVVVRPSYVL-GGRAM--------- 736

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                        ++  I ++        Q  P     + + ++   D   E+ +  L D
Sbjct: 737 ------------EIVYGIEQLRNYMKFAVQASPE----HPILIDKFLDHAIEIDVDALAD 780

Query: 126 RTSGMVAFIASTQGGM--DIEEVAKDYPQKIFKLL----IDPLIGVTSEDVASLCDMLEL 179
            T  ++       GG+   IEE           L      + L+        +L   L +
Sbjct: 781 GTDVVI-------GGIMQHIEEAGIHSGDSACSLPPYSLAEELVEEVRRQTRALALELGV 833

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKN 216
            G   I           A  D  + L+E+NP     +
Sbjct: 834 IGLMNIQF---------AVKDNVVYLIEVNPRASRTS 861


>gi|317483349|ref|ZP_07942342.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium sp.
           12_1_47BFAA]
 gi|316915231|gb|EFV36660.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 445

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 158 GLPTTPYRFAGSLEELRAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 205

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 206 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCT 255

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 256 PIGQRQESGDYRESWQPATE 275


>gi|260460716|ref|ZP_05808966.1| acetyl-CoA carboxylase, biotin carboxylase [Mesorhizobium
           opportunistum WSM2075]
 gi|259033293|gb|EEW34554.1| acetyl-CoA carboxylase, biotin carboxylase [Mesorhizobium
           opportunistum WSM2075]
          Length = 447

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 90/280 (32%), Gaps = 38/280 (13%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK   ++  +PV  G    ++    A+     +  P+ ++K+    GGRG         
Sbjct: 118 EAKRTAKRLGIPVVPGSDGAVTEEKEAKRIAAEIGYPV-IIKASAGGGGRGMKV------ 170

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                   E+ L+  +   R   G+                VY+E      R + + +  
Sbjct: 171 -----AHTEADLEVALQTARSEAGAAFGDD----------AVYIEKYLQKPRHIEVQVFG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQA 183
           D     V F    +    ++   +   ++     ++           A+    L   G  
Sbjct: 216 DGFGRGVHF---GERDCSLQRRHQKVWEEANSPALNAEERSRIGSICATAIADLGYSGAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS-KISFDDNALYRHLDIQ-- 240
            I+        Y  F + +  L   +P+     G   V +  +++       R  DI+  
Sbjct: 273 TIEFLYENGEFY--FIEMNTRLQVEHPVTEAITGIDLVHEQIRVASGGGLSVRQEDIKFN 330

Query: 241 ----ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGA 276
               E R ++ ED R        +++    G +G  V+  
Sbjct: 331 GHAIECR-INAEDPRTFTPSPGTITHFHTPGGLGIRVDSG 369


>gi|295131521|ref|YP_003582184.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes SK137]
 gi|291377204|gb|ADE01059.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes SK137]
          Length = 442

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 109 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDALAGGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 155 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 199


>gi|111224074|ref|YP_714868.1| carbamoyl phosphate synthase large subunit [Frankia alni ACN14a]
 gi|111151606|emb|CAJ63325.2| carbamoyl phosphate synthase, glutamine amidotransferase large
           subunit [Frankia alni ACN14a]
          Length = 1101

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    +S   A++    +  P+ V  S +  GGRG
Sbjct: 683 QVLAEAGLPAPKHGTATSFPGAKAIADEIGYPVLVRPSYVL-GGRG 727


>gi|121610426|ref|YP_998233.1| CoA-binding domain-containing protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121555066|gb|ABM59215.1| CoA-binding domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 711

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 20/69 (28%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  A+ LL    +P  +    +    A  A + +   + +         +       L
Sbjct: 499 LTEPDARRLLEANGIPTTRWQFAADPEGAVRAARGIGTLVAIKAVSAKIVHKSDIGGVRL 558

Query: 63  PADSKGGVR 71
                  VR
Sbjct: 559 SVQGDEAVR 567


>gi|326384009|ref|ZP_08205692.1| phosphoribosylamine--glycine ligase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197169|gb|EGD54360.1| phosphoribosylamine--glycine ligase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 417

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    V  A+  ++ +    ++A+     P +VVK    A G+G
Sbjct: 106 AKDVMAAAGVRTARAEIVDNPAELDAALDRFG-PTWVVKDDGLAAGKG 152


>gi|255323890|ref|ZP_05365016.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Corynebacterium tuberculostearicum SK141]
 gi|255299070|gb|EET78361.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Corynebacterium tuberculostearicum SK141]
          Length = 389

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 39/204 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L     PV +   I SV  A +    + G +  +K++   G  GKG +            
Sbjct: 112 LAALGAPVPRFAAIDSVADARAFFDAVDGRVC-LKAR-RGGYDGKGVW------------ 157

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + ++    + E+L            G+    +  E+  ++ RE  LS+LV   +   
Sbjct: 158 -FPTAENCFELVSELL----------EAGTP---LMAEEKVELTRE--LSILV---ARRP 198

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
               S +  +     ++     I    I P  G+T E        L L     +    + 
Sbjct: 199 ----SGEAKVWPITQSRQ-ENGICAEAIAPAPGLTPELSQR-ASELGLSIAESLGVTGVL 252

Query: 192 PNLYKAFCDKDMSLLEINPLIIMK 215
                AF   +   + +N L +  
Sbjct: 253 AVELFAFDGPEGEDISVNELAMRP 276


>gi|159027401|emb|CAO86885.1| purD [Microcystis aeruginosa PCC 7806]
          Length = 421

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 17/110 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  V  A     +    A++ I+    P+ VVK+   A G+             
Sbjct: 108 AKELMNEAGVITATSETFTDAELAKTYIREQGAPI-VVKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGADIL 115
            GV V  ++   +  I ++   G T +  +    G  V+ + + DG    
Sbjct: 154 -GVIVAETVDMALEAIDDLFTSGFTKVVVEEFLEGEEVSILTLTDGISFR 202


>gi|21243407|ref|NP_642989.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108957|gb|AAM37525.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas axonopodis pv. citri str. 306]
          Length = 381

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|329769961|ref|ZP_08261359.1| carbamoyl-phosphate synthase large subunit [Gemella sanguinis M325]
 gi|328837565|gb|EGF87191.1| carbamoyl-phosphate synthase large subunit [Gemella sanguinis M325]
          Length = 1058

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LLRK ++P   G     V  A    K +  P+ V  S +  G
Sbjct: 672 ELLRKLDIPQPLGKTAFDVETAVQNAKEIGYPVLVRPSYVLGG 714


>gi|322379876|ref|ZP_08054163.1| carbamoyl phosphate synthase large subunit [Helicobacter suis HS5]
 gi|321147711|gb|EFX42324.1| carbamoyl phosphate synthase large subunit [Helicobacter suis HS5]
          Length = 1079

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + + KG    S   A S IK +  P  +  S    G                
Sbjct: 132 KECMLSIGLDLPKGGYAYSEEDALSVIKEVGFPCIIRSSFTLGGE--------------- 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +++                 Q     S ++ + +E+     +E  + ++ D+  
Sbjct: 177 GSSVAFNIEEFRELA-----------QFALEASPISEILIEESLLGCKEFEMEVVRDKDD 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE V          + I P + +T ++   + D 
Sbjct: 226 NCIVVCC-------IENVDPMGVHTGDSITIAPALTLTDKEYQRMRDA 266


>gi|224477523|ref|YP_002635129.1| putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222422130|emb|CAL28944.1| putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 452

 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 33/162 (20%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VP+  G    ++SV   +   K +  P+ V+K+         G   +     K    + 
Sbjct: 126 GVPIIPGSTGAVNSVEEIKEIAKEIGYPV-VLKA-------ASGGGGKGIRIVKEPEDLA 177

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S K   S+ ++                    +YVE    + + + + ++ D     V  
Sbjct: 178 KSFKEAQSEGKKYFNDD--------------RIYVEAFIPVAKHVEVQVIGDGKENYVHL 223

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
                 G     V +   + I +    P   +T E   ++C+
Sbjct: 224 ------GERDCSVQRKNQKLIEE---SPCAALTDERRRAICE 256


>gi|329954802|ref|ZP_08295819.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Bacteroides
           clarus YIT 12056]
 gi|328526906|gb|EGF53917.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Bacteroides
           clarus YIT 12056]
          Length = 503

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 79/237 (33%), Gaps = 44/237 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSAEEAVRICNEIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
              + V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 172 HKEEEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNHGNVI-- 222

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 223 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRKEMGEKAVAAAKAVNYSGAGTIE 275

Query: 193 NLYKAFCDKDMSLLEIN-------PLIIMKNGRLRVLDSKISFDDNALY-RHLDIQE 241
            L     +++   LE+N       P+     G   V +     DD  L+ R  DI +
Sbjct: 276 FLVD--KNRNFYFLEMNTRLQVEHPITEEVVGVDLVKEQIFVADDQPLHLRQEDIFQ 330


>gi|322379264|ref|ZP_08053650.1| carbamoyl phosphate synthase large subunit [Helicobacter suis HS1]
 gi|321148301|gb|EFX42815.1| carbamoyl phosphate synthase large subunit [Helicobacter suis HS1]
          Length = 1079

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    + + KG    S   A S IK +  P  +  S    G                
Sbjct: 132 KECMLSIGLDLPKGGYAYSEEDALSVIKEVGFPCIIRSSFTLGGE--------------- 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +++                 Q     S ++ + +E+     +E  + ++ D+  
Sbjct: 177 GSSVAFNIEEFRELA-----------QFALEASPISEILIEESLLGCKEFEMEVVRDKDD 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE V          + I P + +T ++   + D 
Sbjct: 226 NCIVVCC-------IENVDPMGVHTGDSITIAPALTLTDKEYQRMRDA 266


>gi|171057493|ref|YP_001789842.1| LacI family transcription regulator [Leptothrix cholodnii SP-6]
 gi|170774938|gb|ACB33077.1| transcriptional regulator, LacI family [Leptothrix cholodnii SP-6]
          Length = 351

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 8/68 (11%)

Query: 335 CDVLVKGILSAVKEVKINIPLVMRLEGA-NVDIGNRL---IAESGLNVITAIDLDDAAQ- 389
            D +  G+++A   +KI++P  + + G  N  +  ++   +  +GL    A D+ +AA  
Sbjct: 262 TDDIAAGVIAAANRLKISLPDGLSIAGFDNFGLARKITPALTTAGLP---AEDMGEAAAL 318

Query: 390 KIVHAVKG 397
           +++ A++G
Sbjct: 319 QVIDALEG 326


>gi|160914611|ref|ZP_02076825.1| hypothetical protein EUBDOL_00618 [Eubacterium dolichum DSM 3991]
 gi|158433151|gb|EDP11440.1| hypothetical protein EUBDOL_00618 [Eubacterium dolichum DSM 3991]
          Length = 410

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 18/92 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++ KY +P A+     ++  A   ++    P+ +               KE    + 
Sbjct: 106 SKKIMDKYGIPTARYHTFDTMKDAIRYVEKQGVPIVI---------------KEDGLKAG 150

Query: 68  GGVRVESSLKSVISDIR---EILGSTLITKQT 96
            GV V   +   I  I     I G+ ++ ++ 
Sbjct: 151 KGVTVAHEMDEAIEAIETAFSIPGNKVVIEEC 182


>gi|15807187|ref|NP_295916.1| ribosomal protein S6 modification protein [Deinococcus radiodurans
           R1]
 gi|6459994|gb|AAF11741.1|AE002052_4 ribosomal protein S6 modification protein [Deinococcus radiodurans
           R1]
          Length = 295

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 13/77 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    +P  +  V     +A   I+ +  P+ V+K  + + GR   R  +          
Sbjct: 105 LAAAGLPTPRTGVAFDGESALGLIEEMGYPV-VLKPTVGSWGRMVSRLND---------- 153

Query: 72  VESSLKSVISDIREILG 88
                   + + +E+LG
Sbjct: 154 --RDAAEAVIEHKEVLG 168


>gi|329766906|ref|ZP_08258434.1| phosphoribosylamine-glycine ligase [Gemella haemolysans M341]
 gi|328837631|gb|EGF87256.1| phosphoribosylamine-glycine ligase [Gemella haemolysans M341]
          Length = 432

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 49/119 (41%), Gaps = 22/119 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++RKYN+P AK    +    A+  +     P+ V+K+   A G+             
Sbjct: 123 SKMMMRKYNIPTAKYESFNDYEQAKEYLSKQKAPI-VLKADGLAAGK------------- 168

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV + ++L+    +++E+    +   +    G   + V +E+         +  + D+
Sbjct: 169 -GVIIANTLEEAQIELKEM----MCNAKFNKAG---SSVVIEEFLQGEEFSLMCFVSDK 219


>gi|171910477|ref|ZP_02925947.1| acetyl-CoA carboxylase, biotin carboxylase [Verrucomicrobium
           spinosum DSM 4136]
          Length = 453

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            VP+  G   +I +   A    + +  P+ ++K+    GGRG
Sbjct: 127 GVPITPGSDGIIETEEQAFEIARRIGYPV-MIKASAGGGGRG 167


>gi|161898980|ref|YP_201526.2| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|188575984|ref|YP_001912913.1| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188520436|gb|ACD58381.1| carbamoyl-phosphate synthase, large subunit [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 1080

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIEIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|154684738|ref|YP_001419899.1| phosphoribosylglycinamide formyltransferase 2 [Bacillus
           amyloliquefaciens FZB42]
 gi|171854998|sp|A7Z0Z2|PURT_BACA2 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|154350589|gb|ABS72668.1| PurT [Bacillus amyloliquefaciens FZB42]
          Length = 384

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 31/157 (19%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P A     ++    + A +T+  P  VVK  + + G+G+         S  G++    +
Sbjct: 119 LPTAGYEFANTYEEFKEAAETIGFPC-VVKPLMSSSGKGQS-----VCRSASGLKSCWDM 172

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF--- 133
                    + G  +              V VE+      E  ++LL  R +   +F   
Sbjct: 173 A--------MEGGRVKNG----------RVIVEEFIPFESE--ITLLTVRAANGTSFCAP 212

Query: 134 IASTQGGMDIEEVA--KDYPQKIFKLLIDPLIGVTSE 168
           I   Q   D  E        ++  K        +T E
Sbjct: 213 IGHEQKDGDYIESWQPHHMTEQQIKEAKHIAKSITDE 249


>gi|126728863|ref|ZP_01744678.1| acyl-CoA synthetase, putative [Sagittula stellata E-37]
 gi|126710793|gb|EBA09844.1| acyl-CoA synthetase, putative [Sagittula stellata E-37]
          Length = 679

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 70/230 (30%), Gaps = 33/230 (14%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AKALL+ + V V           A  A   +  P+ +           KG       
Sbjct: 479 EAEAKALLKSFGVRVPGASRAGDPAEAAEAAARIGFPVVL-----------KGEGIAHKT 527

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD-ILRELYLSLL 123
           ++   V   ++ ++V     ++                     VE+     + EL + + 
Sbjct: 528 EAGAVVLNLATAQAVAEAAAKM---------------PAESFLVEEMITGTVAELIIGVT 572

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQ 182
            D   G V  +    GG+  E +       I     D    + S      L       G 
Sbjct: 573 RDAAHGFVLTLG--LGGILTELIRDTASVLIPATREDIAAALQSLRTAPLLTGYRGRAGA 630

Query: 183 ARIDGGDLFPNLYKAFCDKDMSL--LEINPLIIMKNGRLRVLDSKISFDD 230
                 D    L K       +L  +EINPLI      +   D+ I  ++
Sbjct: 631 DVDAVIDTAMALQKLVQQHAGALHEIEINPLICRATDAV-AADALIRMEE 679


>gi|78213637|ref|YP_382416.1| phosphoribosylamine--glycine ligase [Synechococcus sp. CC9605]
 gi|78198096|gb|ABB35861.1| phosphoribosylamine--glycine ligase [Synechococcus sp. CC9605]
          Length = 435

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 15/84 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++  VP A    ++S   A + ++ +  P  VVK+   A G+             
Sbjct: 118 AKQLMQEAGVPTAGHWAVASEAEALAVLQEVQRP-LVVKADGLAAGK------------- 163

Query: 68  GGVRVESSLKSVISDIREILGSTL 91
            GV V  S++   + IRE      
Sbjct: 164 -GVTVADSVEESETAIREAFEGRF 186


>gi|5921957|sp|Q91293|CPSM_RANCA RecName: Full=Carbamoyl-phosphate synthase [ammonia],
           mitochondrial; AltName: Full=Carbamoyl-phosphate
           synthetase I; Short=CPSase I; Flags: Precursor
 gi|467223|gb|AAA19016.1| carbamyl phosphate synthetase [Rana catesbeiana]
          Length = 1496

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 43/219 (19%)

Query: 18  PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLK 77
           P+A    + SV  A  A   +  P+ +  +    G                G  +    +
Sbjct: 557 PIAPSFAVESVKDALEAADKIGYPVMIRSAYALGGL---------------GSGLCPDKE 601

Query: 78  SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAST 137
           ++     + L  T             N + VE      +E+   ++ D     V      
Sbjct: 602 TLTDLATKALAMT-------------NQILVERSVVGWKEIEYEVVRDAADNCVTV---- 644

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQGQARIDGGDL 190
               ++E V          +++ P   +++E+          +   L + G+  I     
Sbjct: 645 ---CNMENVDAMGVHTGDSIVVAPCQTLSNEECQMLRAVSIKVVRHLGIVGECNIQFALH 701

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMKNGRLRV-LDSKISF 228
             +L     + +  L   + L     G     + +KI+ 
Sbjct: 702 PTSLEYVIIEVNARLSRSSALASKATGYPLAFIAAKIAL 740


>gi|150390714|ref|YP_001320763.1| D-alanine--D-alanine ligase [Alkaliphilus metalliredigens QYMF]
 gi|149950576|gb|ABR49104.1| D-alanine--D-alanine ligase [Alkaliphilus metalliredigens QYMF]
          Length = 339

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 31/144 (21%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            AK + + + VP     V  +      +    P    + K      G G           
Sbjct: 109 MAKKIFQYHGVPTPAFQVFQTGEEKLDSNLKFP---LIAKPACEGSGFGIHV-------- 157

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                V    + ++  + E+L      +Q  P       V VE+  +  RE  + ++ + 
Sbjct: 158 ---DSVVYDEQGLMKKVSELL------RQYEPP------VLVEEFIE-GREFTVGVIGNG 201

Query: 127 TSGMVAFIASTQGGMDIEEVAKDY 150
            S  +  I      +D E++ +++
Sbjct: 202 ESKRILPIM----EIDFEDIPEEH 221


>gi|116492119|ref|YP_803854.1| carbamoyl-phosphate synthase large subunit [Pediococcus pentosaceus
           ATCC 25745]
 gi|122266417|sp|Q03HB0|CARB_PEDPA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|116102269|gb|ABJ67412.1| carbamoyl-phosphate synthase large subunit [Pediococcus pentosaceus
           ATCC 25745]
          Length = 1057

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +AL+   N PV    + ++V  A S       P+ V                  PA + G
Sbjct: 133 RALMNDLNEPVPDSGIATTVEEAVSFADQSGYPVIV-----------------RPAFTMG 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G     +            G TL           V  V +E     L+E+   ++ D   
Sbjct: 176 GTGGGIAQDEAELRKITANGLTLS---------PVTQVLIEQSIAGLKEIEFEVMRDSVD 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 NAIVV 231



 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK--GRFKELPADSK 67
            L++   +   +G   ++   A  A +++  P+ V  S +  G   +     +EL    K
Sbjct: 672 KLIQANGIRQPQGRTATTTSGAIEAAESIGYPVLVRPSYVLGGRAMEIVHAKEELENYMK 731

Query: 68  GGVRVESS 75
             V+V  +
Sbjct: 732 NAVKVSHN 739


>gi|319791817|ref|YP_004153457.1| cyanophycin synthetase [Variovorax paradoxus EPS]
 gi|315594280|gb|ADU35346.1| cyanophycin synthetase [Variovorax paradoxus EPS]
          Length = 763

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G ++SS   A  A + +  P+ V  S  + G     R   L   ++ 
Sbjct: 246 KSLLASCGVPVPEGQIVSSAEEAWEAAEDIGLPVAVKPSDANHG-----RGVSLELTTRE 300

Query: 69  GVRVESSLKS 78
            V    ++  
Sbjct: 301 EVMAAFAVAE 310


>gi|317121739|ref|YP_004101742.1| CoA-binding protein [Thermaerobacter marianensis DSM 12885]
 gi|315591719|gb|ADU51015.1| CoA-binding domain protein [Thermaerobacter marianensis DSM 12885]
          Length = 980

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 32/230 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L  + +PV    +  S   A +A + L  P+ V  +      + +    +L     G 
Sbjct: 766 RVLAAFGLPVVPSRMARSEEEAVAAAEALGYPVAVKLASRTLVHKTEWDGVQLNLPDAGA 825

Query: 70  VRVES-SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           VR     +   +                      ++   V+       EL + +  D   
Sbjct: 826 VRAACRRIAERLEAAGRR--------------HELDGFVVQPMVTGGTELVVGVSDDPLF 871

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQG 181
           G    IA   GG+ +E +            I PL  + ++++         L        
Sbjct: 872 G--PLIAFGLGGIHVEVLKD------VVFRITPLTDLDADEMIRSIRGYRLLEGYRGHPP 923

Query: 182 QARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGR-LRVLDSKISFD 229
                  D+   + +   +  +++ L+INPL   + GR  R+LD++I  +
Sbjct: 924 ADVDAIKDVLLRVSRLVEEIPEIAELDINPLKAFEPGRGCRILDARIKVE 973


>gi|301057376|ref|ZP_07198493.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300448519|gb|EFK12167.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 226

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 71/232 (30%), Gaps = 33/232 (14%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  AK +     + V       ++  A    +T   P+ V K               +
Sbjct: 19  VLEPDAKRIFALAGMNVPNFTESRTIDDALRFAETNGYPV-VAKVVSPT---------VV 68

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
               + GV +    +  ++   + L     +   G  G     V VE+      E+ +  
Sbjct: 69  HKTEQKGVILGIHDEKTLTRAFQRL-----SSFDGARG-----VLVEESL-HGAEMIVGA 117

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
            +D   G V  +    GG  +E         +    I P    +         +LE    
Sbjct: 118 KIDFQFGPVILMG--IGGTGVEIYQDTS---LRMAPITPEDAESMMRGLKAHRILEGYRG 172

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEI------NPLIIMKNGRLRVLDSKISF 228
           A     D    +  AF D  M + E       NP +   + +  V D++I  
Sbjct: 173 AEPINRDALSRMLTAFSDLMMDIGETVSSIDLNP-VFCSSEKCVVGDARIML 223


>gi|295399917|ref|ZP_06809898.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111560|ref|YP_003989876.1| RimK domain protein ATP-grasp [Geobacillus sp. Y4.1MC1]
 gi|294978320|gb|EFG53917.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216661|gb|ADP75265.1| RimK domain protein ATP-grasp [Geobacillus sp. Y4.1MC1]
          Length = 315

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 49/179 (27%), Gaps = 25/179 (13%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            +++Y A   L  + +   K +          A K L  P ++ K               
Sbjct: 96  KVNQYMA---LNAHGIRTPKTIAAVGKEQIVEAAKQLGAPSFITK--------------H 138

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
             A    GV++  S++++   +        +   T      V          I R  ++ 
Sbjct: 139 NRAGKGLGVQLFHSIEALQQYLESPAFEDSVDGIT-----LVQEYIQAPEPFITRCEFVG 193

Query: 122 ---LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
              +   R      F         I ++     +   +   + + G +   +      L
Sbjct: 194 GKFMYAVRVDTSEGFELCPADACQIGDLFCPVGETAARPKFEIIDGFSDPILEKYEQFL 252


>gi|166711938|ref|ZP_02243145.1| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 1080

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIEIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|163796882|ref|ZP_02190839.1| Acetyl/propionyl-CoA carboxylase, alpha subunit [alpha
           proteobacterium BAL199]
 gi|159177871|gb|EDP62420.1| Acetyl/propionyl-CoA carboxylase, alpha subunit [alpha
           proteobacterium BAL199]
          Length = 662

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 62/214 (28%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +  +  V    G   VI S   A      +  P+ +  S    GG    R     AD
Sbjct: 119 SKKIAHEAGVSTVPGFLGVIESPEHAAKIAGEIGYPVMIKAS--AGGGGKGMRIANSEAD 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            K GVR   +      + R   G                 V++E   +  R + + ++ D
Sbjct: 177 LKDGVRGAMN------EARSSFGDD--------------RVFIEKFIEQPRHIEIQVMAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
                   +   +    I+   +   ++     ID            +L   +       
Sbjct: 217 GHGN---VVHLGERECSIQRRHQKVIEEAPSPFIDAETRAAMGAQAVALAKQVGYRSAGT 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D     Y  F + +  L   +P+  M  G
Sbjct: 274 VEFIADANKKFY--FLEMNTRLQVEHPVTEMVTG 305


>gi|153835063|ref|ZP_01987730.1| phosphoribosylamine--glycine ligase [Vibrio harveyi HY01]
 gi|148868459|gb|EDL67565.1| phosphoribosylamine--glycine ligase [Vibrio harveyi HY01]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|110803007|ref|YP_698862.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Clostridium perfringens SM101]
 gi|110683508|gb|ABG86878.1| putative glutamate--cysteine ligase/putative amino acid ligase
           [Clostridium perfringens SM101]
          Length = 778

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE--LPADS 66
           K +LR+ N+ V KG    ++  A+   +       V+K +    G G   F       D 
Sbjct: 521 KDILRENNIRVPKGKDYENIDEAKKDFRLFKDEKIVIKPKSTNFGLGISIFPGEYSREDY 580

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
              V +     S I     + G        G  
Sbjct: 581 DKAVEIAFREDSSILIEEFMTGKEYRFLVIGEE 613


>gi|145294862|ref|YP_001137683.1| pyruvate carboxylase [Corynebacterium glutamicum R]
 gi|20531757|gb|AAM27458.1|AF503915_1 pyruvate carboxylase [Corynebacterium crenatum]
 gi|50428375|dbj|BAD30009.1| pyruvate carboxylase [Corynebacterium glutamicum]
 gi|140844782|dbj|BAF53781.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 1140

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 53/180 (29%), Gaps = 28/180 (15%)

Query: 13  RKYNVPVA-KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +K  +PV  +     ++     + +    P++V K+    GGR              G+R
Sbjct: 135 KKAGLPVLAESTPSKNIDDIVKSAEGQTYPIFV-KAVAGGGGR--------------GMR 179

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             SS   +     E           G        VYVE      + + + +L DRT  +V
Sbjct: 180 FVSSPDELRKLATEASREAEAAFGDG-------SVYVERAVINPQHIEVQILGDRTGEVV 232

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLF 191
                 +    ++   +   +      +DP   +     A         G       +  
Sbjct: 233 HLY---ERDCSLQRRHQKVVEIAPAQHLDPE--LRDRICADAVKFCRSIGYQGAGTVEFL 287


>gi|323698972|ref|ZP_08110884.1| CoA-binding domain-containing protein [Desulfovibrio sp. ND132]
 gi|323458904|gb|EGB14769.1| CoA-binding domain-containing protein [Desulfovibrio desulfuricans
           ND132]
          Length = 804

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF 59
           ++ EY+   LL+        G V+   S    +  +  LPG   V+K    A        
Sbjct: 34  SLFEYEVYDLLKASGAETPPGCVLLERSGRFTDEQLAVLPGDRVVLKIVSPA-------- 85

Query: 60  KELPADSKGGVRVESS-LKSVISDIREIL 87
             +     GGVRV  +   ++ S +R +L
Sbjct: 86  -IVHKTEAGGVRVVENRPDAIRSAVRRML 113


>gi|313771661|gb|EFS37627.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL074PA1]
 gi|313810484|gb|EFS48198.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL083PA1]
 gi|313831524|gb|EFS69238.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL007PA1]
 gi|313832511|gb|EFS70225.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL056PA1]
 gi|314974876|gb|EFT18971.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL053PA1]
 gi|314978031|gb|EFT22125.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL045PA1]
 gi|314984557|gb|EFT28649.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL005PA1]
 gi|315095508|gb|EFT67484.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL038PA1]
 gi|327332757|gb|EGE74489.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL096PA2]
 gi|327448377|gb|EGE95031.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL043PA2]
 gi|327448452|gb|EGE95106.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL043PA1]
 gi|328762033|gb|EGF75538.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL099PA1]
          Length = 439

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 106 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDALAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 152 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 196


>gi|254775835|ref|ZP_05217351.1| carbamoyl phosphate synthase large subunit [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 1117

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DVLTAAGLPAPKYGTATTFAQARRIAEDIGYPVLVRPSYVL-GGRG 738



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVAKVGGESARSRVCFTMDEVRETVAELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S++ V      + G+ L    +         V +E+     +E  L L+ D   
Sbjct: 186 ---MARSVEEV----DRMAGAGLAESPSAN-------VLIEESIYGWKEFELELMRDGND 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE V          + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQRMRD 271


>gi|239814066|ref|YP_002942976.1| cyanophycin synthetase [Variovorax paradoxus S110]
 gi|239800643|gb|ACS17710.1| cyanophycin synthetase [Variovorax paradoxus S110]
          Length = 748

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G V++S   A  A + +  P+ V  S  + G     R   L   ++ 
Sbjct: 228 KSLLASCGVPVPEGQVVASAEEAWEAAEDIGLPVVVKPSDANHG-----RGVSLELTTRD 282

Query: 69  GVRVESSLKS 78
            V    ++  
Sbjct: 283 EVMAAFAVAE 292


>gi|269120721|ref|YP_003308898.1| phosphoribosylamine/glycine ligase [Sebaldella termitidis ATCC
           33386]
 gi|268614599|gb|ACZ08967.1| phosphoribosylamine/glycine ligase [Sebaldella termitidis ATCC
           33386]
          Length = 416

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 27/140 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+ +  S    A   +  +  P+ VVK+   A G+             
Sbjct: 106 SKDFMKKYGVKTAEYMTFSDSSKALEYLGKVEFPV-VVKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY-LSLLVDR 126
            GV +  + +     + EI    ++  +    G   N V +E+      E Y  S+L   
Sbjct: 152 -GVIIAQNKEEAEKAVNEI----MVEMRFDSAG---NEVVIEEFL----EGYEASVLSFT 199

Query: 127 TSGMVAFIASTQGGMDIEEV 146
            S  +  + S +    I E 
Sbjct: 200 DSETILTMVSAKDHKKIGEN 219


>gi|229588160|ref|YP_002870279.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens SBW25]
 gi|229360026|emb|CAY46880.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens SBW25]
          Length = 430

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLQEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|229098417|ref|ZP_04229362.1| Pyruvate carboxylase [Bacillus cereus Rock3-29]
 gi|229117443|ref|ZP_04246819.1| Pyruvate carboxylase [Bacillus cereus Rock1-3]
 gi|228666053|gb|EEL21519.1| Pyruvate carboxylase [Bacillus cereus Rock1-3]
 gi|228685034|gb|EEL38967.1| Pyruvate carboxylase [Bacillus cereus Rock3-29]
          Length = 1148

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    I S+   E   +    P+ ++K+ +  GGRG           +    +  
Sbjct: 134 IPVIPGSDGPIDSIEEVEEFAEKYDYPI-IIKASLGGGGRGM-------RIVRASEELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLF 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K     +   +E+NP + ++
Sbjct: 283 LVK---GDEFYFIEVNPRVQVE 301


>gi|237654140|ref|YP_002890454.1| acetyl-CoA carboxylase, biotin carboxylase [Thauera sp. MZ1T]
 gi|237625387|gb|ACR02077.1| acetyl-CoA carboxylase, biotin carboxylase [Thauera sp. MZ1T]
          Length = 662

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 54/185 (29%), Gaps = 28/185 (15%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L     V    G    IS    A    K +  P+ +  S                 
Sbjct: 118 ESKKLAIAAGVNTIPGYNDAISGPDEAVEIAKKIGYPVMIKAS---------------AG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+RV  + K              + +     G   + V++E      R + + +L 
Sbjct: 163 GGGKGLRVAFNDKEAHEGFASC-----VNEARNAFGD--DRVFIEKYVLEPRHIEIQVLG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D       ++   +    I+   +   ++     +DP +     E   +L   +  +   
Sbjct: 216 DSHGN---YVYLNERDCSIQRRHQKVIEEAPSPFVDPAMRKAMGEQAVALARAVNYESAG 272

Query: 184 RIDGG 188
            ++  
Sbjct: 273 TVEFV 277


>gi|212225045|ref|YP_002308281.1| GMP synthase subunit B [Thermococcus onnurineus NA1]
 gi|212010002|gb|ACJ17384.1| GMP synthase [Thermococcus onnurineus NA1]
          Length = 307

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 9/157 (5%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A + +   L+ V        +G+  F       + G+ +         D +
Sbjct: 30  VDSSTAAVLAHRAIGDKLHAVFVNTGFLRKGEPEFVLKTFRDELGMNLHY------VDAQ 83

Query: 85  EILGSTLITKQTGPTGSRV-NCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDI 143
                 L          +V   V++E   ++ RE+    L+  T     +I S  G +  
Sbjct: 84  GRFFEALKGVTDPEEKRKVIGRVFIEVFEEVAREIDAEFLIQGTIA-PDWIESK-GKIKS 141

Query: 144 EEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                  P+++   LI+PL  +  ++V  L   L L 
Sbjct: 142 HHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELGLP 178


>gi|194288987|ref|YP_002004894.1| phosphoribosylamine--glycine ligase [Cupriavidus taiwanensis LMG
           19424]
 gi|193222822|emb|CAQ68825.1| phosphoribosylglycinamide synthetase (GAR synthetase) [Cupriavidus
           taiwanensis LMG 19424]
          Length = 422

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 23/121 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A     +    A + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPTAAYQTFADAAQAHAYIDAQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+     +       L   + G  G+RV    +E+  D   E    +LVD  
Sbjct: 152 -GVVVAMTLEEAHQAVD----MMLDGNKLGDAGARV---VIEEFLD-GEEASFIVLVDGK 202

Query: 128 S 128
           +
Sbjct: 203 N 203


>gi|160941189|ref|ZP_02088526.1| hypothetical protein CLOBOL_06082 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435750|gb|EDP13517.1| hypothetical protein CLOBOL_06082 [Clostridium bolteae ATCC
           BAA-613]
          Length = 749

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 42/144 (29%), Gaps = 28/144 (19%)

Query: 3   IHEY--QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           IHE+  +AK LL                   +   + L G   +  S     GR      
Sbjct: 306 IHEFNERAKELL----------------EEVDQEAERLFGKNKLQLSHKIKDGRVIADQG 349

Query: 61  ELPADSKGGVRVESSLKSVISDIREI-LGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
            +   + G   +  +L+     +++  LG    +    P    VN   +  GA       
Sbjct: 350 SIAGCAGG---LFENLQEAAEILKDATLGKDGFSMTVYPASMPVNLALIRSGAAEK---- 402

Query: 120 LSLLVDRTSGMVAFIASTQGGMDI 143
             LL            S  G  DI
Sbjct: 403 --LLSSGAIMKPCICGSCSGYGDI 424


>gi|90417712|ref|ZP_01225624.1| acetyl-CoA carboxylase, biotin carboxylase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337384|gb|EAS51035.1| acetyl-CoA carboxylase, biotin carboxylase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 449

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +AK   ++  +PV  G    ++    A    + +  P+ +VK+    GGRG
Sbjct: 118 EAKRTAKRLGIPVVPGSAGAVTDDGEAARIAEEIGYPV-IVKASAGGGGRG 167


>gi|221229670|ref|YP_002503086.1| carbamoyl phosphate synthase large subunit [Mycobacterium leprae
           Br4923]
 gi|13092740|emb|CAC30044.1| putative carbamoyl-phosphate synthase subunit [Mycobacterium
           leprae]
 gi|219932777|emb|CAR70629.1| putative carbamoyl-phosphate synthase subunit [Mycobacterium leprae
           Br4923]
          Length = 1129

 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K     A+  V  ++      ++ L  P+ V         R       L +    
Sbjct: 146 KDLVAKVGGESARSKVCFTMDEVRETVEDLGLPVVV---------RPSFTMGGLGSG--- 193

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S + V      + G+ L+   +         V +E+     +E  L L+ D   
Sbjct: 194 ---MAHSDEEV----GRMAGAGLVASPSAN-------VLIEESVYGWKEFELELMRDGH- 238

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE V          + + P + +T  +   + D
Sbjct: 239 DSVVVVCS------IENVDPMGVHTGDSVTVAPAMTLTDWEYQRMRD 279



 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 702 DVLTAAGLPAPKYGTATTFAQARRIAAEIGYPVLVRPSYVL-GGRG 746


>gi|330834159|ref|YP_004408887.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera cuprina Ar-4]
 gi|329566298|gb|AEB94403.1| L-2-aminoadipate N-acetyltransferase [Metallosphaera cuprina Ar-4]
          Length = 281

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           L K  +PV + V+  S  +   A + +  P  + K  I + GR     +++    
Sbjct: 94  LFKAGIPVPQSVIAMSPDSVMKAYEQIGFP-LIDKPPIGSWGRMVSLIRDILEGK 147


>gi|291615780|ref|YP_003518522.1| PurD [Pantoea ananatis LMG 20103]
 gi|291150810|gb|ADD75394.1| PurD [Pantoea ananatis LMG 20103]
          Length = 430

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARHNIPSAEYQNFTDVAPALAYLREKGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 158 GVIVAMTLQEAEDAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGDN 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|229075704|ref|ZP_04208686.1| Pyruvate carboxylase [Bacillus cereus Rock4-18]
 gi|228707480|gb|EEL59671.1| Pyruvate carboxylase [Bacillus cereus Rock4-18]
          Length = 1148

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 37/202 (18%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +PV  G    I S+   E   +    P+ ++K+ +  GGRG           +    +  
Sbjct: 134 IPVIPGSDGPIDSIEEVEEFAEKYDYPI-IIKASLGGGGRGM-------RIVRASEELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLF 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGGDLFPN 193
              +    ++   +   +      I P + ++ +    +C+   +L              
Sbjct: 232 ---ERDCSVQRRHQKVVE------IAPSVSLSDDLRQRICEAAVKLTKNVNYLNAGTVEF 282

Query: 194 LYKAFCDKDMSLLEINPLIIMK 215
           L K     +   +E+NP + ++
Sbjct: 283 LVK---GDEFYFIEVNPRVQVE 301


>gi|225572646|ref|ZP_03781401.1| hypothetical protein RUMHYD_00834 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040000|gb|EEG50246.1| hypothetical protein RUMHYD_00834 [Blautia hydrogenotrophica DSM
           10507]
          Length = 1106

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 49/178 (27%), Gaps = 34/178 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + +A+  V  SV  A +    L  P+                 +        G  +  +
Sbjct: 174 GIEMARSEVAYSVDEALAIADKLGYPVV---------------LRPAYTMGGAGGGLVYN 218

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           ++ + +     L ++L           V  V VE+      EL L ++  R S       
Sbjct: 219 VEELKTVCARGLQASL-----------VGQVLVEESILGWEELELEVV--RDSKNNMITV 265

Query: 136 STQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTSE---DVASLCDMLELQGQARIDGGD 189
                +D   +             +     V  E       + + +E+ G   +    
Sbjct: 266 CFIENIDP--LGVHTGDSFCSAPMLTISEEVQKELQRQAYKIVEAIEVIGGTNVQFAH 321



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 22/61 (36%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P+ +  +  +V  A    + +  P+ V  S +  G   +  ++     +     V  + 
Sbjct: 714 IPMPEAGMAVNVEEALQIAEKIGYPVMVRPSYVLGGRGMEVVYEPESMKAYMAAAVGVTP 773

Query: 77  K 77
            
Sbjct: 774 D 774


>gi|255557562|ref|XP_002519811.1| Biotin caboxylase subunit (BC) of Het-ACCase [Ricinus communis]
 gi|223541050|gb|EEF42607.1| Biotin caboxylase subunit (BC) of Het-ACCase [Ricinus communis]
          Length = 541

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S   A      +  P+ ++K+    GGRG    KE    
Sbjct: 195 ARETMKNAGVPTVPGSEGLLQSTEEAVKLAHEIGFPV-MIKATAGGGGRGMRLAKEPG-- 251

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 252 -----EFVKLLQQAKSEAAAAFGND 271


>gi|254426873|ref|ZP_05040580.1| urea carboxylase [Alcanivorax sp. DG881]
 gi|196193042|gb|EDX88001.1| urea carboxylase [Alcanivorax sp. DG881]
          Length = 1207

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 6   YQAKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++A+AL  K  VP+A G  ++ S+  A+ A   +  P+ ++KS    GG G
Sbjct: 117 HEARALAEKAGVPLAPGTDLLQSLEEAKQAASDIGYPI-MLKSTAGGGGIG 166


>gi|110807855|ref|YP_691375.1| phosphoribosylamine--glycine ligase [Shigella flexneri 5 str. 8401]
 gi|110617403|gb|ABF06070.1| phosphoribosylamine--glycine ligase [Shigella flexneri 5 str. 8401]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A   ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALVYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|89067605|ref|ZP_01155059.1| propionyl-CoA carboxylase, alpha subunit [Oceanicola granulosus
           HTCC2516]
 gi|89046575|gb|EAR52630.1| propionyl-CoA carboxylase, alpha subunit [Oceanicola granulosus
           HTCC2516]
          Length = 666

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 60/204 (29%), Gaps = 34/204 (16%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G   +I+    A    + +  P+ +  S                  
Sbjct: 119 SKKLAAEAGVSTVPGYMGLIADAEEAVKIAREVGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S        +        +K         + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWSDAEAREGFQ-------SSKNEAAASFGDDRIFIEKFVTQPRHIEIQVLAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                V      +    I+   +   ++     +DP  G  +   A    + +  G    
Sbjct: 217 GHGNCVYL---HERECSIQRRNQKVIEEAPSPFLDP--GTRAAMGAQAVALAQAVGYQSA 271

Query: 186 DGGDLFPNLYKAFCDKDMSLLEIN 209
              +   +      DK+   LE+N
Sbjct: 272 GTVEFIVD-----GDKNFYFLEMN 290


>gi|68171179|ref|ZP_00544586.1| Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain,
           ATP-binding:Carbamoyl-phosphate synthetase large chain,
           N-terminal:Biotin carboxylase, C-terminal [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67999410|gb|EAM86052.1| Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain,
           ATP-binding:Carbamoyl-phosphate synthetase large chain,
           N-terminal:Biotin carboxylase, C-terminal [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 655

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K +     V +  G   ++ SVH A+   K++  P+ +               K     
Sbjct: 119 SKKIAESAKVNIIPGYMGIVDSVHEAKEIAKSIGFPVMI---------------KATAGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S + +               + G        +++E   ++ R + + ++ D
Sbjct: 164 GGKGMRIVKSSEEIEQAFTSATNEAAKNFRDG-------RIFIEKYVELPRHIEIQIIAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLELQGQAR 184
           +   +V      +    I+   +   ++     +D            +L   +       
Sbjct: 217 KHGNIVCL---GERECSIQRHNQKVIEETPSPFLDEETRQKMYQQCMNLAKKVGYYSAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           I+   D     Y  F + +  L   +P+  +  G
Sbjct: 274 IEFIVDQDKQFY--FLEMNTRLQVEHPVTELVTG 305


>gi|295677718|ref|YP_003606242.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia sp.
           CCGE1002]
 gi|295437561|gb|ADG16731.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia sp.
           CCGE1002]
          Length = 454

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 117/342 (34%), Gaps = 63/342 (18%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +           + +  P+ +  +                 
Sbjct: 119 AKQTMIKTGVPCVPGSEGALPDDPKEIVKIARQIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLEL-QGQ 182
           D          S +  + + E      ++  K++ + P  G+       L D +      
Sbjct: 217 D----------SFKNAVWLGERDCSMQRRHQKVIEEAPAPGI----ARRLIDRIGDRCAD 262

Query: 183 ARIDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNAL 233
           A    G L    ++  + + +   +E+N       P+  +  G  +     +I+  +   
Sbjct: 263 ACKKMGYLGAGTFEFLYENGEFYFIEMNTRVQVEHPVTELITGVDIVQEQIRIAAGEKLA 322

Query: 234 YRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGG 291
           +R  DIQ  R  + E     E       +    G +    M  G G+ + +      +  
Sbjct: 323 FRQRDIQ-FRGHAIECRINAE---DPFKFTPSPGRLTSWHMPGGPGIRVDSHAYNGYF-- 376

Query: 292 APANFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
            P N+  + G     GA +++  +  +I  S+  V+GI  NI
Sbjct: 377 VPPNYDSMIGKLIAYGATREQAISRMRIALSEMVVEGIQTNI 418


>gi|257056724|ref|YP_003134556.1| acyl-CoA synthetase (NDP forming) [Saccharomonospora viridis DSM
           43017]
 gi|256586596|gb|ACU97729.1| acyl-CoA synthetase (NDP forming) [Saccharomonospora viridis DSM
           43017]
          Length = 926

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 1/71 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y + V    V+SS   A +A   L  P  +         R       L   S   
Sbjct: 694 RLLECYGIEVVPFRVVSSEDDAVAAADELGYPTTLKAFDDTLRDRPDLAGVRLDLSSADA 753

Query: 70  VRVES-SLKSV 79
           VRV    L+ V
Sbjct: 754 VRVAYRDLREV 764


>gi|254446703|ref|ZP_05060178.1| urea carboxylase [Verrucomicrobiae bacterium DG1235]
 gi|198256128|gb|EDY80437.1| urea carboxylase [Verrucomicrobiae bacterium DG1235]
          Length = 1194

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 34/204 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++ +    +VP+  G  ++ +   A++A   +  P+                 K      
Sbjct: 119 SRQIAIANDVPLLPGTELLDTYEDAQAAASEIGYPIM---------------LKSTGGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+R+  + + +      I    L     G +G     V++E      R +   +  D 
Sbjct: 164 GIGIRLCWNDQELHESFDSI--KRLCEHNFGNSG-----VFIEKFVQRARHIEAQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQARI 185
              ++A       G     V +   + I +    P   ++SE  A L +  + L    + 
Sbjct: 217 NGKVIAL------GERDCSVQRRNQKVIEET---PAPALSSEQRADLLNTAVRLSQAVKY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEIN 209
                   +Y    +K    LE+N
Sbjct: 268 RSAGTVEFVYDV-DEKKFYFLEVN 290


>gi|160286293|pdb|2Z04|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
           Carboxylase Atpase Subunit From Aquifex Aeolicus
 gi|160286294|pdb|2Z04|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
           Carboxylase Atpase Subunit From Aquifex Aeolicus
          Length = 365

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E   K  L+K+  PV + +VI        A+K+   P+ V+K++   G  GKG+++  
Sbjct: 94  IRE---KLFLKKHGFPVPEFLVIKR-DEIIDALKSFKLPV-VIKAEKL-GYDGKGQYRIK 147

Query: 63  PADSKGGVRVESSLKS 78
             +    V      + 
Sbjct: 148 KLEDANQVVKNHDKEE 163


>gi|145349915|ref|XP_001419372.1| Carbamoyl-phosphate synthase L chain [Ostreococcus lucimarinus
           CCE9901]
 gi|144579603|gb|ABO97665.1| Carbamoyl-phosphate synthase L chain [Ostreococcus lucimarinus
           CCE9901]
          Length = 1105

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 20  AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
             G V  S   A    + L  P+ V  S +  G
Sbjct: 721 PPGGVARSEEEALKVAEKLGYPVMVRPSYVLGG 753


>gi|119899185|ref|YP_934398.1| phosphoribosylamine--glycine ligase [Azoarcus sp. BH72]
 gi|119671598|emb|CAL95511.1| Phosphoribosylamine--glycine ligase [Azoarcus sp. BH72]
          Length = 425

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  L ++N+P AK    S    A + I+    P+ V+K+   A G+             
Sbjct: 106 AKRFLVRHNIPTAKYQTFSDAAEAHAYIEAEGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L          +   L+  + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMTLDEAHGA----IDMMLLDNKMGDAGARV---VIEEFMQ-GEEASFIVMADGK 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 HALPL 207


>gi|323498787|ref|ZP_08103773.1| phosphoribosylamine--glycine ligase [Vibrio sinaloensis DSM 21326]
 gi|323316149|gb|EGA69174.1| phosphoribosylamine--glycine ligase [Vibrio sinaloensis DSM 21326]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTGSYANFTEIEPAIAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  +   E    ++VD +S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGSS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|302334812|ref|YP_003800019.1| D-alanine--D-alanine ligase [Olsenella uli DSM 7084]
 gi|301318652|gb|ADK67139.1| D-alanine--D-alanine ligase [Olsenella uli DSM 7084]
          Length = 330

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 8   AKALLRKYNVPVAKGVVI-----SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           AKAL R+  +PV +GV +      +   A+  ++TL  PL+V  +   A G   G  +  
Sbjct: 108 AKALYREAGIPVPEGVDLPEGTRLTSDQADRLVRTLGLPLFVKPA---ANGSSFGVTRVT 164

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELY 119
                      ++ +     +   +  T IT         V    VE       E Y
Sbjct: 165 ETAQLADAVARAASEGDRVLVETCVEGTEITVPVIGNDDPVALPIVE--IAFDSEFY 219


>gi|294665180|ref|ZP_06730480.1| phosphoribosylaminoimidazole carboxylase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292605044|gb|EFF48395.1| phosphoribosylaminoimidazole carboxylase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 381

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|288818697|ref|YP_003433045.1| 2-oxoglutarate carboxylase small subunit [Hydrogenobacter
           thermophilus TK-6]
 gi|317374870|sp|D3DJ42|2OCS_HYDTT RecName: Full=2-oxoglutarate carboxylase small subunit; AltName:
           Full=2-oxoglutarate carboxylase beta subunit
 gi|116234990|dbj|BAF34931.1| 2-oxoglutarate carboxylase small subunit [Hydrogenobacter
           thermophilus]
 gi|288788097|dbj|BAI69844.1| 2-oxoglutarate carboxylase small subunit [Hydrogenobacter
           thermophilus TK-6]
 gi|308752285|gb|ADO45768.1| acetyl-CoA carboxylase, biotin carboxylase [Hydrogenobacter
           thermophilus TK-6]
          Length = 472

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           +K ++++  VP   G   ++  V  A+   K +  P+ +  S
Sbjct: 118 SKEVMKRAGVPTVPGSDGILKDVEEAKRIAKEIGYPVLLKAS 159


>gi|78779822|ref|YP_397934.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713321|gb|ABB50498.1| phosphoribosylamine--glycine ligase [Prochlorococcus marinus str.
           MIT 9312]
          Length = 443

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 23/103 (22%)

Query: 4   HEYQ---AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
            EY    AK  +R  N+P AK   ++S+  A   I +   P  VVK+   A G+      
Sbjct: 115 LEYSKSWAKEFMRDANIPTAKFWTVNSLEEATKIINSSSIP-LVVKADGLASGK------ 167

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
                   GV + +S          I          G +G  V
Sbjct: 168 --------GVFIPASKDECYRAAESIFNGKF-----GKSGDIV 197


>gi|15828196|ref|NP_302459.1| phosphoribosylamine--glycine ligase [Mycobacterium leprae TN]
 gi|221230673|ref|YP_002504089.1| phosphoribosylamine--glycine ligase [Mycobacterium leprae Br4923]
 gi|3024486|sp|Q50144|PUR2_MYCLE RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|699375|gb|AAA63135.1| purD [Mycobacterium leprae]
 gi|2076615|emb|CAB08419.1| PurD [Mycobacterium leprae]
 gi|13093750|emb|CAC31191.1| phosphoribosylamine-glycine ligase [Mycobacterium leprae]
 gi|219933780|emb|CAR72333.1| phosphoribosylamine-glycine ligase [Mycobacterium leprae Br4923]
          Length = 422

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 31/123 (25%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPL----YVVKSQIHAGGRGKGRFKELP 63
           AK ++    V  ++  +++S    ++A+     P+    +VVK    A G+         
Sbjct: 106 AKEVMAAAGVRTSRSEIVNSPARLDAALDRFGPPVGDLSWVVKDDRLAAGK--------- 156

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                GV V S      +    +L            G  V    +E   D        ++
Sbjct: 157 -----GVVVTSDRDVARTHAAGLL----------EAGHPV---LLESYLDGPEVSLFCVV 198

Query: 124 VDR 126
             R
Sbjct: 199 DGR 201


>gi|15605791|ref|NP_213168.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Aquifex
           aeolicus VF5]
 gi|3914494|sp|O66608|PURK_AQUAE RecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase;
           Short=N5-CAIR synthase; AltName:
           Full=5-(carboxyamino)imidazole ribonucleotide synthetase
 gi|2982952|gb|AAC06567.1| phosphoribosyl aminoimidazole carboxylase [Aquifex aeolicus VF5]
          Length = 365

 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           I E   K  L+K+  PV + +VI        A+K+   P+ V+K++   G  GKG+++  
Sbjct: 94  IRE---KLFLKKHGFPVPEFLVIKR-DEIIDALKSFKLPV-VIKAEKL-GYDGKGQYRIK 147

Query: 63  PADSKGGVRVESSLKS 78
             +    V      + 
Sbjct: 148 KLEDANQVVKNHDKEE 163


>gi|327396046|dbj|BAK13468.1| phosphoribosylamine-glycine ligase PurD [Pantoea ananatis AJ13355]
          Length = 426

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPSAEYQNFTDVAPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|302037884|ref|YP_003798206.1| phosphoribosylamine-glycine ligase [Candidatus Nitrospira defluvii]
 gi|300605948|emb|CBK42281.1| Phosphoribosylamine-glycine ligase [Candidatus Nitrospira defluvii]
          Length = 425

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K ++    +P A       +  A + +   P P+ VVK+   A G+             
Sbjct: 106 SKDIMAANRIPTAAARSFERMEQALAYLDEQPVPI-VVKADGLAQGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++ +     +R+ +  ++        G   + V +E+  D   EL L    D  
Sbjct: 152 -GVVVATTREEATQAVRDAMEKSVF-------GQAGHRVLIEEFLD-GEELTLMAFTDGK 202

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 203 TVVPMVPA 210


>gi|294624713|ref|ZP_06703380.1| phosphoribosylaminoimidazole carboxylase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292600986|gb|EFF45056.1| phosphoribosylaminoimidazole carboxylase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 381

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRAGLDAALARIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|239622276|ref|ZP_04665307.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|239514273|gb|EEQ54140.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           longum subsp. infantis CCUG 52486]
          Length = 445

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 158 GLPTTPYRFAGSLEELRAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 205

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 206 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 255

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 256 PIGQRQESGDYRESWQPATE 275


>gi|124514371|gb|EAY55884.1| Acetyl-CoA carboxylase, biotin carboxylase [Leptospirillum rubarum]
          Length = 456

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+L+R+  VPV  G    ISS   A +  + +  P  ++K+    GGRG  R      D
Sbjct: 124 AKSLMRETRVPVVPGSQGAISSEEEAITLSREIGYP-LIIKASAGGGGRGM-RIVHQEGD 181

Query: 66  SKGGVRVESS 75
               +    +
Sbjct: 182 FDNALHAAQT 191


>gi|83646198|ref|YP_434633.1| carbamoylphosphate synthase [Hahella chejuensis KCTC 2396]
 gi|83634241|gb|ABC30208.1| probable carbamoylphosphate synthase [Hahella chejuensis KCTC 2396]
          Length = 412

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 28/136 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALLR  ++P  +   + S   A S  + L  P+ V               K +    + G
Sbjct: 113 ALLRAADLPAPRYDFVESYAQAISLAEALGYPVVV---------------KPVDGTGQEG 157

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V   +  + + S ++  L +++ +              +++  +   E  LS  + R   
Sbjct: 158 VGAAADPEQLKSVVKSALNASVKS-----------RAIIQEFVE-GVEYSLSGFIYRGQI 205

Query: 130 MVAFIASTQGGMDIEE 145
              FIAS +G     E
Sbjct: 206 AP-FIASYRGSPSRTE 220


>gi|41407217|ref|NP_960053.1| carbamoyl phosphate synthase large subunit [Mycobacterium avium
           subsp. paratuberculosis K-10]
 gi|41395568|gb|AAS03436.1| CarB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 1117

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A    + +  P+ V  S +  GGRG
Sbjct: 694 DVLTAAGLPAPKYGTATTFAQARRIAEDIGYPVLVRPSYVL-GGRG 738



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVAKVGGESARSRVCFTMDEVRETVAELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S++ V      + G+ L    +         V +E+     +E  L L+ D   
Sbjct: 186 ---MARSVEEV----DRMAGAGLAESPSAN-------VLIEESIYGWKEFELELMRDGND 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE V          + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQRMRD 271


>gi|332751440|gb|EGJ81842.1| phosphoribosylamine--glycine ligase [Shigella flexneri 4343-70]
 gi|332998846|gb|EGK18441.1| phosphoribosylamine--glycine ligase [Shigella flexneri K-272]
 gi|332998973|gb|EGK18563.1| phosphoribosylamine--glycine ligase [Shigella flexneri K-218]
 gi|333010739|gb|EGK30167.1| phosphoribosylamine--glycine ligase [Shigella flexneri VA-6]
 gi|333014306|gb|EGK33660.1| phosphoribosylamine--glycine ligase [Shigella flexneri K-227]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A   ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALVYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|332304565|ref|YP_004432416.1| phosphoribosylamine/glycine ligase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332171894|gb|AEE21148.1| phosphoribosylamine/glycine ligase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 23/123 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEIEPAIAYLQEKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLAEAEEAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 205

Query: 129 GMV 131
            + 
Sbjct: 206 VLP 208


>gi|322411552|gb|EFY02460.1| carbamoyl phosphate synthase large subunit [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 1058

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K L+ +   P+ +  +++SV  A +  +T+  P+ V
Sbjct: 131 QFKQLMEELEQPIPESEIVTSVEEAVAFAQTIGYPVIV 168


>gi|300867674|ref|ZP_07112319.1| acetyl-CoA carboxylase biotin carboxylase subunit [Oscillatoria sp.
           PCC 6506]
 gi|300334257|emb|CBN57491.1| acetyl-CoA carboxylase biotin carboxylase subunit [Oscillatoria sp.
           PCC 6506]
          Length = 451

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 8   AKALLRKYNVP-VA-KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           AK  +++  VP V   G ++     A +  + +  P+ ++K+    GGRG    +E
Sbjct: 120 AKETMQRVGVPTVPGSGGLLKDETEAIAIAREIGYPV-MIKATAGGGGRGMRLVRE 174


>gi|149910254|ref|ZP_01898899.1| probable chemotaxis transducer [Moritella sp. PE36]
 gi|149806723|gb|EDM66688.1| probable chemotaxis transducer [Moritella sp. PE36]
          Length = 694

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 79/225 (35%), Gaps = 36/225 (16%)

Query: 159 IDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
           +D   G+    +A   + L      +     L   L     D    ++ +       +  
Sbjct: 195 VDMETGMRGFLLAGKDEFLTPYINGKEQFSSLISQLSNTVSDNPAQVMLLGSSKATIDNW 254

Query: 219 LRVL------------DSKISFDDNA-------------LYR-HLDIQELRDVSEEDSRE 252
           +  +            D+K + +D A              +R  +   + R+ S  ++R 
Sbjct: 255 ISAVVEKQIALRRSIGDAK-TMNDMADLVGEAKGKVYFDKFREQIKTFKQRETSLMNARM 313

Query: 253 IEAKQHNLSYIALD--GNIGCMVNGAGLA-MATMDIIKLYGGAPANFLDVGGGADQDKVA 309
           +E ++   + I     G I  +++G  +A   T  I+ L GG PA   ++     +  ++
Sbjct: 314 VELEETESAVINTTILGTILAIISGIVIAVWLTRHIMNLLGGEPAYIAEIAKTVAKGDLS 373

Query: 310 AAFKIITSDSSVKGILI---NIFGGIMRCDVLVKGILSAVKEVKI 351
              K   SD + +GI     N+   +     L + I +   + K+
Sbjct: 374 IELK---SDGNDRGIFAEMKNMIANLKEKAELAQTIAAGELDNKV 415


>gi|119356082|ref|YP_910726.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119353431|gb|ABL64302.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 448

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +    VPV  G   ++S++  A    +    P+ ++K     GG+G     E    
Sbjct: 119 AKATMIAAGVPVVPGSQGLVSNLAEAVKTAQNTGYPV-IIKPTAGGGGKGMRVVHEEN-- 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                ++E +L +  S+  +  G+              + VY+E   +  R + + +L D
Sbjct: 176 -----QLEKALNTARSEAEQAFGN--------------SGVYIEKFLENPRHVEIQILSD 216

Query: 126 RTSGMV 131
           +    +
Sbjct: 217 QHGNTI 222


>gi|302681893|ref|XP_003030628.1| hypothetical protein SCHCODRAFT_77734 [Schizophyllum commune H4-8]
 gi|300104319|gb|EFI95725.1| hypothetical protein SCHCODRAFT_77734 [Schizophyllum commune H4-8]
          Length = 1164

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 64/218 (29%), Gaps = 38/218 (17%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++PVA+   +SSV+AA  A +T+  P+ +         R       L +       
Sbjct: 210 LKEIDIPVAQSTAVSSVNAALQAAETIGYPVIL---------RSAFTLGGLGSG------ 254

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              +   +     + L  +               V +E      +EL   ++  R     
Sbjct: 255 FAENPDELRDLSAKSLSLS-------------PQVLIERSMKGWKELEYEVV--RDGADN 299

Query: 132 AFIASTQGGMDIEEVAKDYPQKI-----FKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
             I       D   +       I       L  D    + S  + ++   L + G+  I 
Sbjct: 300 TIICCNMENFDP--LGTHTGDSIVVAPSQTLPDDEYHMLRSAAIKTI-RHLGVVGECNIQ 356

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224
                 +      + +  L   + L     G      +
Sbjct: 357 YALHPSSKEYCVIEVNARLSRSSALASKATGYPLAYTA 394


>gi|257486535|ref|ZP_05640576.1| hypothetical protein PsyrptA_24895 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 355

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 38/214 (17%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDMLELQGQARI 185
              ++A       G+    V +   + + +     L  G+  E  A+   +         
Sbjct: 217 QGEVLAL------GVRDCSVQRRNQKVLEETPAPNLPDGMADELCAAAIKLARAVNYRSA 270

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNG 217
              +        F  +D     LE+N  + +++G
Sbjct: 271 GTVEF------VFDSEDQRFYFLEVNTRLQVEHG 298


>gi|212709051|ref|ZP_03317179.1| hypothetical protein PROVALCAL_00083 [Providencia alcalifaciens DSM
           30120]
 gi|212688340|gb|EEB47868.1| hypothetical protein PROVALCAL_00083 [Providencia alcalifaciens DSM
           30120]
          Length = 428

 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++N+P A     + +  A + +  +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHNIPTAAYENFTEIEPALAYLDKVGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     + ++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAKDAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VIPM 209


>gi|295395840|ref|ZP_06806028.1| GNAT family acetyltransferase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971375|gb|EFG47262.1| GNAT family acetyltransferase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 901

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL   ++ V      S+V  A+   + +  P+  +K+      R + R         GG
Sbjct: 680 ELLHACSIQVLPYHPSSTVEEAKEIARKIGYPV-ALKA---VDSRLRHRL------DLGG 729

Query: 70  VRVESSLKSVISD 82
           VR++ S    +  
Sbjct: 730 VRLDVSSDEEMDF 742


>gi|224417769|ref|ZP_03655775.1| biotin carboxylase [Helicobacter canadensis MIT 98-5491]
 gi|253827112|ref|ZP_04869997.1| acetyl-CoA carboxylase [Helicobacter canadensis MIT 98-5491]
 gi|313141310|ref|ZP_07803503.1| biotin carboxylase [Helicobacter canadensis MIT 98-5491]
 gi|253510518|gb|EES89177.1| acetyl-CoA carboxylase [Helicobacter canadensis MIT 98-5491]
 gi|313130341|gb|EFR47958.1| biotin carboxylase [Helicobacter canadensis MIT 98-5491]
          Length = 455

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           AK +++   VPV  G    + S   A    K +  P+
Sbjct: 124 AKEVMKNAGVPVIPGSDGAVKSKEEALELAKEIGYPV 160


>gi|168037513|ref|XP_001771248.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677489|gb|EDQ63959.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 582

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 15/120 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA-GGRGKGRFKE-----LPAD 65
            +K++V + + + I S   AE A K    P  ++KS+  A  GRG    +      L   
Sbjct: 125 FKKHDVALPEFMKIDSAEEAEEAGKLFGYP-LMLKSRRDAYDGRGNAVVESREALPLAIS 183

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN--------CVYVEDGADILRE 117
           S GG+      +     ++E+       +        V         C  VE  A I +E
Sbjct: 184 SLGGIERCLYAEKWAPFVKELAIMVARGRDGSIRSFPVVETTHVSNICHTVEAPARIPKE 243


>gi|51892329|ref|YP_075020.1| biotin carboxylase [Symbiobacterium thermophilum IAM 14863]
 gi|51856018|dbj|BAD40176.1| biotin carboxylase [Symbiobacterium thermophilum IAM 14863]
          Length = 449

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +KAL++K  VP   G   V+ S   A    + +  P+ V K+                  
Sbjct: 119 SKALMKKAGVPTIPGSDGVVESEAEALRVAEEIGYPVMV-KATAG-------GGGRGIRI 170

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG 97
           +     +  +L+   S+     G+  +  +  
Sbjct: 171 ANSPDELVQALQKAASEAGAAFGNAAVFVEKY 202


>gi|161723270|ref|NP_301455.2| carbamoyl phosphate synthase large subunit [Mycobacterium leprae
           TN]
 gi|22095526|sp|Q9CCR2|CARB_MYCLE RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
          Length = 1121

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K     A+  V  ++      ++ L  P+ V         R       L +    
Sbjct: 138 KDLVAKVGGESARSKVCFTMDEVRETVEDLGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S + V      + G+ L+   +         V +E+     +E  L L+ D   
Sbjct: 186 ---MAHSDEEV----GRMAGAGLVASPSAN-------VLIEESVYGWKEFELELMRDGH- 230

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
             V  + S      IE V          + + P + +T  +   + D
Sbjct: 231 DSVVVVCS------IENVDPMGVHTGDSVTVAPAMTLTDWEYQRMRD 271



 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 694 DVLTAAGLPAPKYGTATTFAQARRIAAEIGYPVLVRPSYVL-GGRG 738


>gi|315303746|ref|ZP_07874253.1| carbamoyl-phosphate synthase, large subunit [Listeria ivanovii FSL
           F6-596]
 gi|313627888|gb|EFR96514.1| carbamoyl-phosphate synthase, large subunit [Listeria ivanovii FSL
           F6-596]
          Length = 1044

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 113 RDLMNELGEPVPESDIIHNLDEAYAFVERIGYPVIVRPAYTLGGSGG 159


>gi|296283722|ref|ZP_06861720.1| hypothetical protein CbatJ_08874 [Citromicrobium bathyomarinum
           JL354]
          Length = 678

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 54/176 (30%), Gaps = 28/176 (15%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L ++  V    G    I +   A      +  P+ +  S                 
Sbjct: 118 ESKKLAKEAGVNTVPGSKDAIDTTEEALKISNEIGYPVMMKAS---------------AG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + K V             TK+ G      + V++E   +  R + + +L 
Sbjct: 163 GGGKGMRLAWNDKDVEEGFEA-------TKREGLNSFGDDRVFIEKFIEDPRHIEIQILA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL 179
           DR    +      +    I+   +   ++     + P +     E   +L   +  
Sbjct: 216 DRQGNTLYL---NERECSIQRRHQKVVEEAPSPFVTPEMRKAMGEQAVALSQAVGY 268


>gi|257875735|ref|ZP_05655388.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus EC20]
 gi|257809901|gb|EEV38721.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus EC20]
          Length = 1069

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + + P+ +  ++S+V AA    K +  P+ V  +    G                
Sbjct: 141 KQLMEELDQPIPESEIVSTVEAAVEFAKKIGFPIIVRPAFTLGG---------------T 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 186 GGGMCNNEEELRQIAENGLKLSPVTQC 212



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A +  + +  P+ V  S +  G
Sbjct: 676 DLFE-QA---LQALDIPQPPGDTATNEQEAIAIAQEIGYPVLVRPSYVLGG 722


>gi|257866102|ref|ZP_05645755.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus EC30]
 gi|257872433|ref|ZP_05652086.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus EC10]
 gi|257800036|gb|EEV29088.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus EC30]
 gi|257806597|gb|EEV35419.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus EC10]
          Length = 1069

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + + P+ +  ++S+V AA    K +  P+ V  +    G                
Sbjct: 141 KQLMEELDQPIPESEIVSTVEAAVEFAKKIGFPIIVRPAFTLGG---------------T 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 186 GGGMCNNEEELRQIAENGLKLSPVTQC 212



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A +  + +  P+ V  S +  G
Sbjct: 676 DLFE-QA---LQALDIPQPPGDTATNEQEAIAIAQEIGYPVLVRPSYVLGG 722


>gi|237740186|ref|ZP_04570667.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp.
           2_1_31]
 gi|229422203|gb|EEO37250.1| carbamoyl-phosphate synthase subunit large [Fusobacterium sp.
           2_1_31]
          Length = 1061

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV    ++ ++  AE  +K +  P+ V
Sbjct: 136 RDLMNELNEPVPDSAIVHTLEEAEKFVKEIGYPVIV 171


>gi|171912641|ref|ZP_02928111.1| Allophanate hydrolase subunit 2 [Verrucomicrobium spinosum DSM
           4136]
          Length = 1204

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 34/212 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ +  +  VP+  G  ++++V  A    + +  P+                 K      
Sbjct: 121 AREIAMESGVPLLPGTGLLATVDEAVEKAQGIGYPVM---------------LKSTAGGG 165

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  +   + +    +    L       +G     +++E      R + + +  D 
Sbjct: 166 GIGMRVCENDSDLRAQFESV--QRLSMANFKDSG-----LFLEKFVRHARHIEVQIFGDG 218

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI- 185
              ++A       G     V +   + I +    P   ++SE  A L    E  G+A   
Sbjct: 219 EGRVLAL------GERDCSVQRRNQKVIEET---PAPHLSSEGRAELLACAERLGKAVNY 269

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                   +Y A   +    LE+N  + +++G
Sbjct: 270 RSAGTVEFVYDA-DSRKFYFLEVNTRLQVEHG 300


>gi|24115289|ref|NP_709799.1| phosphoribosylamine--glycine ligase [Shigella flexneri 2a str. 301]
 gi|30064713|ref|NP_838884.1| phosphoribosylamine--glycine ligase [Shigella flexneri 2a str.
           2457T]
 gi|24054584|gb|AAN45506.1| phosphoribosylglycinamide synthetase, GAR synthetase [Shigella
           flexneri 2a str. 301]
 gi|30042973|gb|AAP18695.1| phosphoribosylglycinamide synthetase, GAR synthetase [Shigella
           flexneri 2a str. 2457T]
 gi|281603389|gb|ADA76373.1| Phosphoribosylglycinamide synthetase, GAR synthetase [Shigella
           flexneri 2002017]
 gi|313648656|gb|EFS13096.1| phosphoribosylamine--glycine ligase [Shigella flexneri 2a str.
           2457T]
 gi|332749203|gb|EGJ79625.1| phosphoribosylamine--glycine ligase [Shigella flexneri 2747-71]
 gi|332762852|gb|EGJ93111.1| phosphoribosylamine--glycine ligase [Shigella flexneri 2930-71]
 gi|332765549|gb|EGJ95763.1| phosphoribosylamine--glycine ligase [Shigella flexneri K-671]
 gi|333014355|gb|EGK33708.1| phosphoribosylamine--glycine ligase [Shigella flexneri K-304]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A   ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAEYQNFTEVEPALVYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|262067670|ref|ZP_06027282.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378619|gb|EFE86137.1| carbamoyl-phosphate synthase, large subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 1058

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV    ++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSAIVHTLEEAEKFVKEIGYPVIV 168


>gi|254304289|ref|ZP_04971647.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148324481|gb|EDK89731.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 1058

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV    ++ ++  AE  +K +  P+ V
Sbjct: 133 RDLMNELNEPVPDSAIVHTLEEAEKFVKEIGYPVIV 168


>gi|297580378|ref|ZP_06942305.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536024|gb|EFH74858.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 893

 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 23/111 (20%)

Query: 263 IALDG-NIGCMVNGAGLAMATMDIIKLYGGAPA---------------------NFLDVG 300
           + L G  +  + NG G A+  +D +   GG  A                     N +D+ 
Sbjct: 294 VPLRGERLAIITNGGGPAIMAVDALLERGGKLAQLEDEIYEKLNLSLPQSWSHSNPVDIV 353

Query: 301 GGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVK 350
           G AD  +  +   I+    ++  ILI +    I   +   + ++ AV++  
Sbjct: 354 GDADHQRYVSTLNILLESENIDAILIMHSPSAIAHSEQTAQALVEAVQKHP 404


>gi|325831454|ref|ZP_08164708.1| carbamoyl-phosphate synthase, large subunit [Eggerthella sp. HGA1]
 gi|325486708|gb|EGC89156.1| carbamoyl-phosphate synthase, large subunit [Eggerthella sp. HGA1]
          Length = 1078

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 45/156 (28%), Gaps = 33/156 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + +  +  ++     S+  AE  +  L  P+ +  S    G                G  
Sbjct: 136 MAELGIETSRSGYAYSIADAEDIVAELGYPVVLRPSFTLGG---------------AGGG 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +      +   + + L       +  P G     V VE+  +  +E  + ++ DR    +
Sbjct: 181 IAHDAAELHEIVGQGL-------ELSPAGE----VLVEESIEGWKEYEMEVMRDRAGNGI 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                      IE            + + P   +T 
Sbjct: 230 IV-------CSIENFDAMGVHTGDSITVAPAQTLTD 258


>gi|225870647|ref|YP_002746594.1| carbamoyl-phosphate synthase large chain [Streptococcus equi subsp.
           equi 4047]
 gi|254813603|sp|C0M756|CARB_STRE4 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|225700051|emb|CAW94096.1| carbamoyl-phosphate synthase large chain [Streptococcus equi subsp.
           equi 4047]
          Length = 1058

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   P+ +  ++++V AA      +  P+ V
Sbjct: 133 KQLMKELGEPIPESEIVTTVEAAIGFANAIGYPVIV 168


>gi|224024527|ref|ZP_03642893.1| hypothetical protein BACCOPRO_01252 [Bacteroides coprophilus DSM
           18228]
 gi|224017749|gb|EEF75761.1| hypothetical protein BACCOPRO_01252 [Bacteroides coprophilus DSM
           18228]
          Length = 389

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 36/156 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L     +  AK    +S    + A + +  P  V+K  + + G+G+       + +K
Sbjct: 112 AKEL----GLKTAKYFYATSFEELKEAAEKIGYPC-VIKPLMSSSGKGQ-------SIAK 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           G   +  S +                   G  G  +  + VE+      E  ++LL    
Sbjct: 160 GPEDLSYSWE---------------YGCMGSRGD-IKELIVEEFVKFDSE--ITLLTVTQ 201

Query: 128 SGMVAF----IASTQGGMDIEEVAKDYPQKIFKLLI 159
                     I   Q G D  E  +  P  I    +
Sbjct: 202 KNGPTLFCPPIGHVQKGGDYRESFQ--PAHIAPEHL 235


>gi|148981206|ref|ZP_01816332.1| phosphoribosylamine--glycine ligase [Vibrionales bacterium SWAT-3]
 gi|145960962|gb|EDK26288.1| phosphoribosylamine--glycine ligase [Vibrionales bacterium SWAT-3]
          Length = 429

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTGSYANFTEIEPAIAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +++     I+++L         G  G   + V +E+  +   E    ++VD +S
Sbjct: 154 GVIVAMTIEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGSS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|325469928|gb|ADZ16243.1| acetyl CoA-carboxylase [uncultured bacterium]
          Length = 156

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 8  AKALLRKYNVPVAK--GVVISSVHAAESAIKTLPGP 41
          AK LLR   VPV +  G  +  +       K +  P
Sbjct: 36 AKNLLRSAGVPVLEGTGEPVHEMEEGREIAKKIGFP 71


>gi|312144658|ref|YP_003996104.1| phosphoribosylamine/glycine ligase [Halanaerobium sp.
           'sapolanicus']
 gi|311905309|gb|ADQ15750.1| phosphoribosylamine/glycine ligase [Halanaerobium sp.
           'sapolanicus']
          Length = 430

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK +L KYN+P A+  V +   +A + +K    P  V+K++  A G+G
Sbjct: 106 AKDILNKYNIPTAEYEVFTDPDSALNYLKNADYP-LVIKAEGLAQGKG 152


>gi|284039008|ref|YP_003388938.1| cyanophycin synthetase [Spirosoma linguale DSM 74]
 gi|283818301|gb|ADB40139.1| cyanophycin synthetase [Spirosoma linguale DSM 74]
          Length = 895

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++ K  L K  +PV  G+V+ +    ++A+  L  P  VVK      GRG
Sbjct: 218 HETKRRLGKAAIPVPTGLVVETEAELQAALDKLGFP-LVVKPLDGNHGRG 266


>gi|225412262|ref|ZP_03761451.1| hypothetical protein CLOSTASPAR_05484 [Clostridium asparagiforme
           DSM 15981]
 gi|225042227|gb|EEG52473.1| hypothetical protein CLOSTASPAR_05484 [Clostridium asparagiforme
           DSM 15981]
          Length = 695

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 18/230 (7%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E+++K  L  + +   +  V  S   A  A      P+ V+K                
Sbjct: 481 LSEHESKEFLCGHGIETPRERVARSEAEALEAAGEYGYPV-VLKID--------SSDIMH 531

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            +D+            +     EIL +          G     V V++      E+ + +
Sbjct: 532 KSDAGCVKVGIQDEGQLRQAYGEILENAKAYDPQAEIG----GVLVQEMLKAGTEVIIGV 587

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQG 181
             D   G    +    GG+ +E               + L  + S     L       + 
Sbjct: 588 NNDPQFG-PMVM-CGLGGVFVEIFKDVSMAMAPVSEAEALKMLRSLKGYKLFAGYRGGKK 645

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISFD 229
                  DL   + +   D+   L E  INP+ + + G        + +D
Sbjct: 646 LDEQAVADLIVRVARMAADEKDRLAELDINPVFVYEKGVALADALVLKYD 695


>gi|222154052|gb|ACM47216.1| plastid carbamoylphosphate synthetase large subunit [Medicago
           truncatula]
          Length = 1167

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 37/171 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      +        S++         +  PL V  +    G            
Sbjct: 204 RELFKQAMKNIGIKTPPSGTCSTLEECMQIANQIEFPLIVRPAFTLGG------------ 251

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + ++   +  + ++L            N V +E      +E  L ++ 
Sbjct: 252 -TGGGI--AYNREDLMEICKAGIAASLT-----------NQVLIEKSLLGWKEYELEVMR 297

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
           D  +  V  I S      IE +          + + P   +T ++   L D
Sbjct: 298 D-LADNVVIICS------IENIDPMGVHTGDSITVAPAQTLTDKEYQRLRD 341


>gi|296327313|ref|ZP_06869865.1| phosphoribosylamine-glycine ligase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296155563|gb|EFG96328.1| phosphoribosylamine-glycine ligase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 426

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  AK    +    A   +  +  P+ V+K+   A G+             
Sbjct: 106 AKDFMQKYGVKTAKYQSFTDKEKAIKYLDKISYPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + K       E L   +  K     G   + V +E+  D +    +S+L    
Sbjct: 152 -GVVIAQNRKE----AEETLNDMMTNKVFAAAG---DTVVIEEFLDGVE---ISVLSITD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SEVIIPFISAKDHKKISE 218


>gi|288920768|ref|ZP_06415068.1| GCN5-related N-acetyltransferase [Frankia sp. EUN1f]
 gi|288347844|gb|EFC82121.1| GCN5-related N-acetyltransferase [Frankia sp. EUN1f]
          Length = 919

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           A  LL  Y + V    V+     A  A +    P+  +K+
Sbjct: 668 ASELLDCYGIDVVPSQVVRDADEAVEAAELFGWPV-ALKA 706


>gi|197334390|ref|YP_002157187.1| phosphoribosylamine--glycine ligase [Vibrio fischeri MJ11]
 gi|197315880|gb|ACH65327.1| phosphoribosylamine--glycine ligase [Vibrio fischeri MJ11]
          Length = 430

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTGSYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  +   E    ++VD  S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGAS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|59713002|ref|YP_205778.1| phosphoribosylamine--glycine ligase [Vibrio fischeri ES114]
 gi|59481103|gb|AAW86890.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Vibrio fischeri ES114]
          Length = 430

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTGSYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  +   E    ++VD  S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGAS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|89098721|ref|ZP_01171603.1| carbamoyl-phosphate synthase large subunit [Bacillus sp. NRRL
           B-14911]
 gi|89086683|gb|EAR65802.1| carbamoyl-phosphate synthase large subunit [Bacillus sp. NRRL
           B-14911]
          Length = 1070

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 13/37 (35%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +P  +G    S   A      +  P+ V  S +  G
Sbjct: 678 GIPQPQGKTAFSAEDAAVIAAEIGYPVLVRPSYVLGG 714



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           ++L+ +   PV +  +I ++  A +  + +  P+ V
Sbjct: 133 RSLMNELGEPVPESEIIHNIDEALAFAEQIGYPVIV 168


>gi|254230358|ref|ZP_04923743.1| phosphoribosylamine--glycine ligase [Vibrio sp. Ex25]
 gi|151937125|gb|EDN55998.1| phosphoribosylamine--glycine ligase [Vibrio sp. Ex25]
          Length = 369

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|47096556|ref|ZP_00234146.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           str. 1/2a F6854]
 gi|254831564|ref|ZP_05236219.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           10403S]
 gi|254899468|ref|ZP_05259392.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           J0161]
 gi|254912393|ref|ZP_05262405.1| carbamoyl-phosphate synthase [Listeria monocytogenes J2818]
 gi|254936720|ref|ZP_05268417.1| carbamoyl-phosphate synthase [Listeria monocytogenes F6900]
 gi|47015088|gb|EAL06031.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258609317|gb|EEW21925.1| carbamoyl-phosphate synthase [Listeria monocytogenes F6900]
 gi|293590375|gb|EFF98709.1| carbamoyl-phosphate synthase [Listeria monocytogenes J2818]
          Length = 1070

 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYAFVERIGYPVIVRPAYTLGGSGG 179


>gi|289704671|ref|ZP_06501099.1| phosphoribosylamine--glycine ligase [Micrococcus luteus SK58]
 gi|289558625|gb|EFD51888.1| phosphoribosylamine--glycine ligase [Micrococcus luteus SK58]
          Length = 432

 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 18/108 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V ++   A +A+     P +VVK    A G+             
Sbjct: 109 AKQVMAAAGVPTAGSRVCTTAAEAAAALDEFGAP-HVVKDDGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V       ++        G T++ +     G  V+   + DG D
Sbjct: 155 -GVVVTPDRAEALAHAEACFAAGGTVVIEDFL-DGPEVSLFVICDGED 200


>gi|237785581|ref|YP_002906286.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758493|gb|ACR17743.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 1157

 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L +  +P        ++  A++   ++  P+ V  S +  GGRG
Sbjct: 698 LERSGLPAPAYGTAKNLEEAQAVASSIGYPVLVRPSYVL-GGRG 740


>gi|206602747|gb|EDZ39228.1| Acetyl-CoA carboxylase, biotin carboxylase [Leptospirillum sp.
           Group II '5-way CG']
          Length = 456

 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+L+R+  VPV  G    ISS   A +  + +  P  ++K+    GGRG  R      D
Sbjct: 124 AKSLMRETRVPVVPGSQGAISSEEEAITLSREIGYP-LIIKASAGGGGRGM-RIVHQEGD 181

Query: 66  SKGGVRVESS 75
               +    +
Sbjct: 182 FDNALHAAQT 191


>gi|111019238|ref|YP_702210.1| phosphoribosylglycinamide formyltransferase 2 [Rhodococcus jostii
           RHA1]
 gi|122955866|sp|Q0SEI4|PURT_RHOSR RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|110818768|gb|ABG94052.1| phosphoribosylglycinamide formyltransferase 2 [Rhodococcus jostii
           RHA1]
          Length = 403

 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 28/105 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      S+    +A + +  P  V+K  + + G+G+   ++      GGV     
Sbjct: 132 GLPTSPYEFAESLEEVRAATERIGFPC-VIKPVMSSSGKGQSTVRDT-----GGVETAW- 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVN--CVYVEDGADILREL 118
                              +    G R+N   V VE   D   E+
Sbjct: 185 -------------------EYALAGGRINYGRVIVEGFVDFDYEI 210


>gi|13470483|ref|NP_102052.1| acetyl-CoA carboxylase biotin carboxylase subunit [Mesorhizobium
           loti MAFF303099]
 gi|14021225|dbj|BAB47838.1| biotin carboxylase [Mesorhizobium loti MAFF303099]
          Length = 447

 Score = 37.6 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 63/206 (30%), Gaps = 37/206 (17%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK   ++  +PV  G    ++    A+     +  P+ ++K+    GGRG         
Sbjct: 118 EAKRTAKRLGIPVVPGSDGAVTEEKEAKRIAAEIGYPV-IIKASAGGGGRGMKV------ 170

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                   E+ L+  +   R   G+                VY+E      R + + +  
Sbjct: 171 -----AHSEADLEVALQTARSEAGAAFGDD----------AVYIEKYLQKPRHIEVQVFG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQA 183
           D     V F    +    ++   +   ++     ++           A     L   G  
Sbjct: 216 DGFGRGVHF---GERDCSLQRRHQKVWEEANSPALNAEERSRIGGICAKAIADLGYSGAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN 209
            I+           + + +   +E+N
Sbjct: 273 TIEF---------LYENGEFYFIEMN 289


>gi|317474805|ref|ZP_07934079.1| CoA binding domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909486|gb|EFV31166.1| CoA binding domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
          Length = 687

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 28/226 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q +ALLR   +PV +  V ++     +  +    P+             K       +D
Sbjct: 486 HQVQALLRSAGIPVVEEFVSANEEEVLAFARRAGFPVV-----------AKVVGPVHKSD 534

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G V    S + +  +   ++               V  + V+       EL++    +
Sbjct: 535 VGGVVLNIKSEQHLALEFERMMQIP-----------EVTGIMVQPMLK-GTELFIGAKYE 582

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
              G V       GG+ +E +             +    + S     +       +G   
Sbjct: 583 EKFGHVVL--CGLGGIFVEVLKDVSSGLAPLSYDEAYSMIHSLRAYKIIKGTRGQKGVNE 640

Query: 185 IDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
               ++   L        ++  ++INPL+  +   +  +D++I  +
Sbjct: 641 DKFAEIIVRLSTLLRFATEIKEMDINPLLATE-KYVIAVDARIRIE 685


>gi|297155769|gb|ADI05481.1| carbamoyl phosphate synthase large subunit [Streptomyces
           bingchenggensis BCW-1]
          Length = 1103

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K     S   A+     +  P+ V  S +  GGRG
Sbjct: 683 RVLTEAGLPAPKYGTAFSFAEAKGIAAEIGYPVMVRPSYVL-GGRG 727


>gi|183982212|ref|YP_001850503.1| carbamoyl-phosphate synthase large chain CarB [Mycobacterium
           marinum M]
 gi|183175538|gb|ACC40648.1| carbamoyl-phosphate synthase large chain CarB [Mycobacterium
           marinum M]
          Length = 1145

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P  +    ++   A    + +  P+ V  S +  GGRG
Sbjct: 718 DVLTAAGLPAPRYGTATTFAQARRIAEDIGYPVLVRPSYVL-GGRG 762



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      +  L  P+ V         R       L +    
Sbjct: 162 KDIVAKVGGESARSRVCFTMDEVRETVAELGLPVVV---------RPSFTMGGLGSG--- 209

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S   V       L ++               V +E+     +E  L L+ D   
Sbjct: 210 ---MAYSADEVDRMAGAGLAASPSAN-----------VLIEESIYGWKEFELELMRDGHD 255

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE +          + + P + +T  +   L D
Sbjct: 256 NVVVV-------CSIENLDPMGVHTGDSVTVAPAMTLTDREYQRLRD 295


>gi|330835420|ref|YP_004410148.1| phosphoribosylglycinamide formyltransferase 2 [Metallosphaera
           cuprina Ar-4]
 gi|329567559|gb|AEB95664.1| phosphoribosylglycinamide formyltransferase 2 [Metallosphaera
           cuprina Ar-4]
          Length = 395

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 27/164 (16%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  +    S+   A+SA K +  P   +K ++ + G G                + +S
Sbjct: 125 GVPTTRYAFASNEEEAKSACKDVGFPCL-LKPEMSSSGHGHV--------------LVNS 169

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           ++ V        G           G     V VE+   +  E  L++L  R     +   
Sbjct: 170 VEDVEK------GYRESISHARGKG---RSVIVEEYVKVDTE--LTVLTYRHMNNGSIET 218

Query: 136 STQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLE 178
            T   ++ +  +  Y +      +D  +I  + E    + + L 
Sbjct: 219 KTLEPIEHQRPSYYYVESWHPSTVDQDIISRSKEYATRVVNELG 262


>gi|327191533|gb|EGE58548.1| CoA-binding domain-containing protein [Rhizobium etli CNPAF512]
          Length = 684

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVK 46
           + E  AK  L    +PV +G+   S   A    + L  P+ V+K
Sbjct: 479 LTEADAKIELSACGLPVPRGLQAFSSREAAEQAERLGFPV-VLK 521


>gi|325570248|ref|ZP_08146114.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156731|gb|EGC68905.1| carbamoyl-phosphate synthase [Enterococcus casseliflavus ATCC
           12755]
          Length = 1061

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ + + P+ +  ++S+V AA    K +  P+ V  +    G                
Sbjct: 133 KQLMEELDQPIPESEIVSTVEAAVEFAKKIGFPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQ 95
           G  + ++ + +       L  + +T+ 
Sbjct: 178 GGGMCNNEEELRQIAENGLKLSPVTQC 204



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A +  + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQALDIPQPPGDTATNEQEAIAIAQKIGYPVLVRPSYVLGG 714


>gi|306820628|ref|ZP_07454257.1| phosphoribosylamine-glycine ligase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551359|gb|EFM39321.1| phosphoribosylamine-glycine ligase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 424

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 27/131 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     S   +A   ++T+  P+ V+K+   A G+             
Sbjct: 106 SKNLMKKYNIPTASYETFSDYESALKYLETMAMPV-VIKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIRE-ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            GV +    +  IS I+  +L            G     + +E+    +    +S+L   
Sbjct: 152 -GVTIAQDKEEAISAIKASMLDKKF--------GKSGENIVIEEFLTGVE---VSVLTFT 199

Query: 127 TSGMVAFIAST 137
               +  + S+
Sbjct: 200 DGKTIVPMISS 210


>gi|304415425|ref|ZP_07396076.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Candidatus Regiella insecticola LSR1]
 gi|304282724|gb|EFL91236.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Candidatus Regiella insecticola LSR1]
          Length = 434

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPTAEYQNFTDVETALAYVRQKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + + ++L   +        G   + + +E+      E    ++VD   
Sbjct: 154 GVVVAMTLAEAEAAVNDMLAGNVF-------GHAGHRIVIEEFLQ-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 ILPM 209


>gi|300725927|ref|ZP_07059389.1| phosphoribosylamine--glycine ligase [Prevotella bryantii B14]
 gi|299776778|gb|EFI73326.1| phosphoribosylamine--glycine ligase [Prevotella bryantii B14]
          Length = 422

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 25/105 (23%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA + ++N+P AK      +++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKAFMERHNIPTAKYHTFDGTTLEEGLKFLETLKAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
              GV +  +L+    + +++LG           G+    V +E+
Sbjct: 158 ---GVLILPTLEEAKKEFKDMLGGMF--------GNASAKVVIEE 191


>gi|148243627|ref|YP_001228784.1| phosphoribosylglycinamide formyltransferase 2 [Synechococcus sp.
           RCC307]
 gi|172047884|sp|A5GX22|PURT_SYNR3 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|147851937|emb|CAK29431.1| Formate-dependent phosphoribosyl glycinamide formyl transferase
           [Synechococcus sp. RCC307]
          Length = 393

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 26/124 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  A+    SS     SA + L  P+ VVK  + + G+G+               V ++
Sbjct: 121 GLRTARFGYASSAEELSSAAEPLGWPV-VVKPVMSSSGKGQS--------------VATN 165

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            + +             T  T       + V VE+     +E  ++LL  R         
Sbjct: 166 PEELQQA---------WTAATQGARGSASLVIVEEFLRFEQE--ITLLTVRQKDGPTLFC 214

Query: 136 STQG 139
              G
Sbjct: 215 PPIG 218


>gi|134085958|ref|NP_001076978.1| propionyl-CoA carboxylase alpha chain, mitochondrial [Bos taurus]
 gi|133778161|gb|AAI23877.1| PCCA protein [Bos taurus]
          Length = 741

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   +      
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDSETRRAMGEQAVALAKAVNYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|187930100|ref|YP_001900587.1| acetyl-CoA carboxylase biotin carboxylase subunit [Ralstonia
           pickettii 12J]
 gi|187726990|gb|ACD28155.1| acetyl-CoA carboxylase, biotin carboxylase [Ralstonia pickettii
           12J]
          Length = 455

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 113/333 (33%), Gaps = 45/333 (13%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +        +  K +  P+ +  +                 
Sbjct: 119 AKQAMIKSGVPCVPGSEGALPEDPKEILATAKKVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALINAVNMTREEAGRAFGNPE----------VYMEKFLEHPRHVEIQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQA 183
           D+    V      +    ++   +   ++     I   LI    +  A  C  +  +G  
Sbjct: 217 DQHRNAVWL---GERDCSMQRRHQKVIEEAPAPHIPRRLIERIGDRCAEACKKIGYRGAG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
             +        Y  F + +  +   +P+  M  G  +     +++  +   +R  DI  L
Sbjct: 274 TFEFLYENGEFY--FIEMNTRVQVEHPVTEMITGVDIVQEQIRVAAGEKLRFRQKDIV-L 330

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  + E     E       +    G I    +  G G+ + +      +   P N+  + 
Sbjct: 331 KGHAIECRINAE---DPFKFTPSPGRITSWHVPGGPGVRVDSHAYNGYF--VPPNYDSMI 385

Query: 301 G-----GADQDKVAAAFKIITSDSSVKGILINI 328
           G     GA +++  A  +I  S+  V+GI  N+
Sbjct: 386 GKVITYGATREQAIARMRIALSEMVVEGIQTNV 418


>gi|77456840|ref|YP_346345.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens Pf0-1]
 gi|77380843|gb|ABA72356.1| phosphoribosylamine--glycine ligase [Pseudomonas fluorescens Pf0-1]
          Length = 430

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|16803875|ref|NP_465360.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           EGD-e]
 gi|224500066|ref|ZP_03668415.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           Finland 1988]
 gi|224501364|ref|ZP_03669671.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           FSL R2-561]
 gi|254829169|ref|ZP_05233856.1| pyrAB [Listeria monocytogenes FSL N3-165]
 gi|284802281|ref|YP_003414146.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           08-5578]
 gi|284995423|ref|YP_003417191.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           08-5923]
 gi|22095510|sp|Q8Y665|CARB_LISMO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|16411289|emb|CAC99913.1| pyrAB [Listeria monocytogenes EGD-e]
 gi|258601579|gb|EEW14904.1| pyrAB [Listeria monocytogenes FSL N3-165]
 gi|284057843|gb|ADB68784.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           08-5578]
 gi|284060890|gb|ADB71829.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           08-5923]
          Length = 1070

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYAFVERIGYPVIVRPAYTLGGSGG 179


>gi|328802667|ref|NP_001178322.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase [Bos taurus]
          Length = 2225

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAYALGG 562


>gi|327183879|gb|AEA32326.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           amylovorus GRL 1118]
          Length = 1062

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     +++V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCKKLGEPVPPSKTVNTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    + K +    +  L  + +T+     
Sbjct: 180 GI--CHNRKELAEIAKNGLELSPVTECLIEK 208


>gi|312865223|ref|ZP_07725451.1| carbamoyl-phosphate synthase, large subunit [Streptococcus downei
           F0415]
 gi|311099334|gb|EFQ57550.1| carbamoyl-phosphate synthase, large subunit [Streptococcus downei
           F0415]
          Length = 1059

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  ++P   G   ++   A ++ + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQDLDIPQPPGHTATNEEEAVASARQIGFPVLVRPSYVLGG 714


>gi|297480522|ref|XP_002691546.1| PREDICTED: carbamoyl-phosphate synthetase 2, aspartate
           transcarbamylase, and dihydroorotase [Bos taurus]
 gi|296482376|gb|DAA24491.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase [Bos taurus]
          Length = 2190

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAYALGG 562


>gi|282897930|ref|ZP_06305925.1| Acetyl-CoA carboxylase, biotin carboxylase [Raphidiopsis brookii
           D9]
 gi|281197074|gb|EFA71975.1| Acetyl-CoA carboxylase, biotin carboxylase [Raphidiopsis brookii
           D9]
          Length = 335

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 81/274 (29%), Gaps = 36/274 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++ +     +    +  P+ ++K+    GGR           
Sbjct: 7   AKETMQKAGVPTVPGSDGLVETETQGLAIAHQIGYPV-MIKATAGGGGR----------- 54

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S    I       G        G  G     VY+E   +  R +   +L D
Sbjct: 55  ---GMRLVRSEDEFIKLFHAAQGE--AGAAFGNAG-----VYIEKFIERPRHIEFQILGD 104

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     +D  L              +   G   
Sbjct: 105 NYGN---VIHLGERDCSIQRRNQKLLEEAPSPALDEDLREKMGHAAVKAAQFINYTGAGT 161

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-------LRVLDSKISFDDNALYRHL 237
           ++        +  F + +  +   +P+  M  G              ++ FD + +    
Sbjct: 162 VEFLLDKSGHFY-FMEMNTRIQVEHPVTEMVTGVDLLVEQIRIAQGERLKFDQDKVTLQG 220

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
              E R  +E+   +       +S     G  G 
Sbjct: 221 HAIECRINAEDPDHDFRPSPGKISGYLPPGGPGV 254


>gi|239831286|ref|ZP_04679615.1| phosphoribosylamine--glycine ligase [Ochrobactrum intermedium LMG
           3301]
 gi|239823553|gb|EEQ95121.1| phosphoribosylamine--glycine ligase [Ochrobactrum intermedium LMG
           3301]
          Length = 438

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 76/232 (32%), Gaps = 50/232 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++++P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 118 KDLCARFDIPTGAYGRFNNAPKAKAYIRQQGAPI-VVKADGLAAGK-------------- 162

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   +  +             G  G+ V    VE+  D     +  +  D  +
Sbjct: 163 GVVVAMTLDEALDAVDACF-----EGAFGSAGAEV---VVEEFLDGEEASFFCI-CDGKT 213

Query: 129 GMVAFIASTQGGMDIEE------------------VAKDYPQKIFKLLIDPLIGVTSEDV 170
            +   + S Q    + +                  + ++  ++  + LI+P +   +E  
Sbjct: 214 ALP--LGSAQDHKRVGDGDTGPNTGGMGAYAPAPVMTQEIVERTMRELIEPTMRGMAEIG 271

Query: 171 ASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL 222
           A    +L L      DG  L         +      E   L++  N  L  L
Sbjct: 272 APFSGILFLGLMIGKDGPKLIE------YNTRFGDPECQVLMMRLNSDLLAL 317


>gi|114650522|ref|XP_001148084.1| PREDICTED: propionyl-Coenzyme A carboxylase, alpha polypeptide
           isoform 2 [Pan troglodytes]
          Length = 640

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|66047634|ref|YP_237475.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63258341|gb|AAY39437.1| Phosphoribosylglycinamide synthetase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330969388|gb|EGH69454.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 431

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|56475599|ref|YP_157188.1| biotin carboxylase subunit of acetyl-CoA carboxylase-like enzyme
           [Aromatoleum aromaticum EbN1]
 gi|56311642|emb|CAI06287.1| biotin carboxylase subunit of acetyl-CoA carboxylase-like enzyme
           [Aromatoleum aromaticum EbN1]
          Length = 460

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 9/90 (10%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +PV  G  + SV  A +  +    P+ + K+    GGRG     E         ++ ++
Sbjct: 128 GLPVVPGGEVDSVEDARALAEKTGWPILI-KAVSGGGGRGMKLVHEPD-------QLAAT 179

Query: 76  LKSVISDIREILGS-TLITKQTGPTGSRVN 104
           ++  +++     G   +  ++   +G  V 
Sbjct: 180 IELAMAEAHASFGDPRVYLERYVASGRHVE 209


>gi|23100371|ref|NP_693838.1| hypothetical protein OB2916 [Oceanobacillus iheyensis HTE831]
 gi|22778604|dbj|BAC14872.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 554

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 39/110 (35%), Gaps = 15/110 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESA---IKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K +L KY VP  +G         E        +  P  VVK     GG+G          
Sbjct: 89  KQILNKYKVPTPEGKEFEEEATTEEIISYATAIDYP-LVVKPVSGTGGKG---------- 137

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL 115
              G++ E  L   +  +RE L S  I  +    G     +YV DG  I 
Sbjct: 138 VIAGIQNEEELVEALEYVREKLNSPRIILEKYFEGED-YRIYVIDGQVIA 186


>gi|333024980|ref|ZP_08453044.1| putative phosphoribosylglycinamide formyltransferase 2
           [Streptomyces sp. Tu6071]
 gi|332744832|gb|EGJ75273.1| putative phosphoribosylglycinamide formyltransferase 2
           [Streptomyces sp. Tu6071]
          Length = 379

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 50/177 (28%), Gaps = 37/177 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP  +  +++         +   G   V+K                      GV 
Sbjct: 110 LSELGVPCPRHRLVADPADVTRFAEEGEGYPVVLK-------------TTRGGYDGKGVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S +      R  +                  V  E+  D +REL  +++      + 
Sbjct: 157 VVGSEEEAAEPFRAGV-----------------RVLAEEKVDYVRELAANVVRSPHGQAV 199

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
               + S Q     + V    P        + L G+  E    + + L + G   ++
Sbjct: 200 AYPVVESQQVDGVCDTVIAPAPGL-----DEELSGIAQEMALRIANELGVIGHLAVE 251


>gi|327401412|ref|YP_004342251.1| acetyl-CoA carboxylase, biotin carboxylase [Archaeoglobus veneficus
           SNP6]
 gi|327316920|gb|AEA47536.1| acetyl-CoA carboxylase, biotin carboxylase [Archaeoglobus veneficus
           SNP6]
          Length = 491

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 69/209 (33%), Gaps = 34/209 (16%)

Query: 8   AKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L+ +  VPV  G   + ++  A    + +  P+ +               K      
Sbjct: 119 ARKLMSEAGVPVVPGSPELRNLDDAYKWAEKIGYPVAI---------------KASGGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+ +  + + + +           +K  G    R   VY+E      R +   +L D 
Sbjct: 164 GIGISIAWTEEELEAAYHR-------SKTLGEKYFRDPAVYIEKYMPKPRHIEFQVLADE 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                  I   +    I+   +   ++    ++D       E+       L ++G AR  
Sbjct: 217 HGN---VIHLGERECSIQRRHQKVIEEAPSPVVD-------EETREKIGRLAVKG-ARHI 265

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
           G      +   + + +   LE+N  + ++
Sbjct: 266 GYTNAGTMEFLYYEGEFYFLEMNTRVQVE 294


>gi|254519980|ref|ZP_05132036.1| bifunctional glutamate-cysteine ligase/glutathione synthetase
           [Clostridium sp. 7_2_43FAA]
 gi|226913729|gb|EEH98930.1| bifunctional glutamate-cysteine ligase/glutathione synthetase
           [Clostridium sp. 7_2_43FAA]
          Length = 769

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 37/118 (31%), Gaps = 25/118 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L + N+ V  G    S+  A   IK       VVK +    G G   FK+       
Sbjct: 511 KEILNRNNIKVPSGFEFFSLEDAIENIKKFVDKPIVVKPKSTNFGIGISIFKDGAK---- 566

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
               E  +K               +          N V VE+     +E    ++ D+
Sbjct: 567 ----EEDIKEAFEIA-------FASD---------NTVLVEEFIK-GKEYRFLVIGDK 603


>gi|260796501|ref|XP_002593243.1| hypothetical protein BRAFLDRAFT_124863 [Branchiostoma floridae]
 gi|229278467|gb|EEN49254.1| hypothetical protein BRAFLDRAFT_124863 [Branchiostoma floridae]
          Length = 1039

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 33/172 (19%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K ++    VP+ +G      SV   ++  + +  P+ V K+    GG+G          
Sbjct: 159 SKHIMSAAGVPIIEGYHGEDQSVERLKAEAEKIGYPVMV-KAVRGGGGKGM--------- 208

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               V  E+  +  +   +     +   +             VE   D  R + + +  D
Sbjct: 209 --RIVMTEAEFEEQLESAKREALKSFNDEIM----------LVEKFVDTPRHVEVQVFGD 256

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML 177
           +   +V          + +   +   QKI +    P  G+T E    L +  
Sbjct: 257 QHGNVVYL-------FERDCSVQRRHQKIIEEA--PAPGLTEEVRRRLGEAA 299


>gi|206895285|ref|YP_002246570.1| phosphoribosylamine--glycine ligase [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737902|gb|ACI16980.1| phosphoribosylamine--glycine ligase [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 419

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+++ +VP A+  V SS+  A + +KT      VVK+   A G+             
Sbjct: 106 AKNLMKRCHVPTAQFEVFSSLDDAVNYVKT-RQRPLVVKADGLAQGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV +  S +  +      L S +  +  G  G     V VE+
Sbjct: 152 -GVVIAQSTEEAVQA----LESLMEERVFGSAG---EKVVVEE 186


>gi|56461392|ref|YP_156673.1| phosphoribosylamine-glycine ligase [Idiomarina loihiensis L2TR]
 gi|56180402|gb|AAV83124.1| Phosphoribosylamine-glycine ligase [Idiomarina loihiensis L2TR]
          Length = 427

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L+++N+P A     + V  A++ +     P+ V+K+   A G+             
Sbjct: 108 SKDFLQRHNIPTADYQNFTEVEPAKAYVAEKGLPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  S +   + I ++L       + G  G RV    +E+  
Sbjct: 154 -GVIIAESQEQADAAIDDMLA----GNRFGDAGHRV---VIEEFL 190


>gi|297694350|ref|XP_002824442.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like isoform 3 [Pongo abelii]
          Length = 681

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDVETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|296129540|ref|YP_003636790.1| GCN5-related N-acetyltransferase [Cellulomonas flavigena DSM 20109]
 gi|296021355|gb|ADG74591.1| GCN5-related N-acetyltransferase [Cellulomonas flavigena DSM 20109]
          Length = 926

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 80/227 (35%), Gaps = 24/227 (10%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           QA  LLR   V V   V +     A +A   L  P+ V K+ + A            AD 
Sbjct: 704 QAAELLRAAGVDVWASVRVHDADEAVAAADRLGWPVAV-KTTVPAL--------RHRADL 754

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G     +    + +D+  IL   L  +     G  V  + V+  A       ++ +V R
Sbjct: 755 GGVRLDVADADELRADVAGILA--LAGEHDPGPG--VPPLEVQAMAPHG----VACVV-R 805

Query: 127 TSGMVAF--IASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGV-TSEDVASLCDMLELQGQ 182
           +S    F  + S   G D  ++  D    +  L  +D    V T      +     L   
Sbjct: 806 SSEDPLFGPVISFGLGGDASDLLGDVTYGVPPLTDVDVAELVRTPRAAPRMFGYRGLPAL 865

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                 DL   +        D+  LE+NP+++   G L VL +  S 
Sbjct: 866 DVTALEDLVARVSVLADALPDVRSLELNPVVVSPQG-LAVLGAYASV 911


>gi|302382959|ref|YP_003818782.1| phosphoribosylamine/glycine ligase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193587|gb|ADL01159.1| phosphoribosylamine/glycine ligase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 425

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 23/105 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A   V   +  A++A+K    P YV+K+   A G+             
Sbjct: 107 SKAFMARHEIPTAHYGVYDRIKDAKAALKVFK-PPYVIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +        ++I  +LG        G  G+RV    +E+  
Sbjct: 153 -GVAISPDRHDGEAEIERMLGGRF-----GAAGARV---VIEEFM 188


>gi|167042617|gb|ABZ07339.1| putative phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
           protein [uncultured marine crenarchaeote
           HF4000_ANIW133K13]
          Length = 420

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 22/115 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +++ N+  A   V      A+  +  +   + V+K+   A G+             
Sbjct: 103 AKEFMKRNNISTAAFEVFDDASKAKEYVNGIEHDV-VIKADGLAAGK------------- 148

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            GV V +S       I  +L    ++K+ G  G     + +ED  D +   Y++L
Sbjct: 149 -GVIVCNSKTEAEKAIDLML----VSKKFGDAGK---NIIIEDRIDGIEASYIAL 195


>gi|161619144|ref|YP_001593031.1| propionyl-coenzyme A carboxylase, alpha polypeptide [Brucella canis
           ATCC 23365]
 gi|161335955|gb|ABX62260.1| propionyl-coenzyme A carboxylase, alpha polypeptide [Brucella canis
           ATCC 23365]
          Length = 667

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 63/205 (30%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G   +I     A     ++  P+ +  S                  
Sbjct: 119 SKKLAAEAGVSTVPGHMGLIEDADEAVRIAGSIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + +          G  L   +   +    + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWNDEEARE------GFQLSRNEAKSSFGD-DRIFIEKFVTQPRHIEIQVLGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           +  G V ++   +    I+   +   ++     +D        E   +L   +       
Sbjct: 217 QH-GNVVYLGERE--CSIQRRNQKVIEEAPSPFLDEATRKAMGEQAVALAKAVGYYSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++           + +++   LE+N
Sbjct: 274 VEFI--------VYGNRNFYFLEMN 290


>gi|115372578|ref|ZP_01459885.1| D-ala D-ala ligase C-terminus family [Stigmatella aurantiaca
           DW4/3-1]
 gi|115370299|gb|EAU69227.1| D-ala D-ala ligase C-terminus family [Stigmatella aurantiaca
           DW4/3-1]
          Length = 835

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK LLR   +      V+  +   ++    LP PL V  +   A         +  +  +
Sbjct: 574 AKELLRARGISTPAFAVVKRLEDVKAV--DLPYPLIVKPAHEDA-----SMGVDFDSVVE 626

Query: 68  GGVRVESSLKSVISDIRE 85
           G  ++  +   V+S   +
Sbjct: 627 GPAQLARAAAEVLSTFHQ 644


>gi|150395696|ref|YP_001326163.1| phosphoribosylamine--glycine ligase [Sinorhizobium medicae WSM419]
 gi|150027211|gb|ABR59328.1| phosphoribosylamine--glycine ligase [Sinorhizobium medicae WSM419]
          Length = 423

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 15/78 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y +P       S   +A + ++    P+ V+K+   A G+              
Sbjct: 107 KDLCARYGIPTGAYKRFSDAESARAYVREQGAPI-VIKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREI 86
           GV V  +L+  ++ + E 
Sbjct: 152 GVTVAMNLEEALAAVDEC 169


>gi|1872144|emb|CAA72256.1| carbamoyl-phosphate synthase (glutamine-hydrolysing) large subunit
           [Thermus thermophilus HB27]
          Length = 1028

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AL ++  +P  +G V  S   A      +  PL V  S +  G
Sbjct: 675 ALCQRLGIPQPEGRVAQSPEEALRLAPEVGFPLLVRPSYVLGG 717


>gi|18309669|ref|NP_561603.1| phosphoribosylamine-glycine ligase [Clostridium perfringens str.
           13]
 gi|18144346|dbj|BAB80393.1| phosphoribosylamine-glycine ligase [Clostridium perfringens str.
           13]
          Length = 319

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A   V      A+S ++    P  V+K+   A G+             
Sbjct: 9   SKDFMKKYGVKTADYEVFYDYEEAKSYLENCKYPR-VIKADGLAAGK------------- 54

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +    I    E L   +I       G     + VE+    +    LS+ 
Sbjct: 55  -GVVICENKNQAI----ETLDLFMIEDVFNGAGK---KIVVEEFLQGVEASILSVT 102


>gi|94984574|ref|YP_603938.1| acetyl-CoA carboxylase, biotin carboxylase [Deinococcus
           geothermalis DSM 11300]
 gi|94554855|gb|ABF44769.1| acetyl-CoA carboxylase, biotin carboxylase [Deinococcus
           geothermalis DSM 11300]
          Length = 445

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 9/105 (8%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE----- 61
            +A+  + NVPV  G  V+  V AA  A K +  P+  +K+    GGRG+   +      
Sbjct: 119 GRAIAAQSNVPVVPGTGVLEDVDAALLAAKQIGYPVL-LKASAGGGGRGQKVVRTQEELR 177

Query: 62  --LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
                  +           ++    E      +       G  ++
Sbjct: 178 SAFGQAQEEARLYFGDPAIIMEKFLEEFRHVEVQVMGDGQGHVIH 222


>gi|325860293|ref|ZP_08173415.1| phosphoribosylamine--glycine ligase [Prevotella denticola CRIS
           18C-A]
 gi|325482172|gb|EGC85183.1| phosphoribosylamine--glycine ligase [Prevotella denticola CRIS
           18C-A]
          Length = 422

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+ ++++++P A        ++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKSFMKRHHIPTAAYETFDGKTIEEGMKFLETLKAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++RE+LG           G+    V +E+   
Sbjct: 158 ---GVLIVPTLEEAKKELREMLGGMF--------GNASAKVVIEEFLS 194


>gi|313675823|ref|YP_004053819.1| carbamoyl-phosphate synthase, large subunit [Marivirga tractuosa
           DSM 4126]
 gi|312942521|gb|ADR21711.1| carbamoyl-phosphate synthase, large subunit [Marivirga tractuosa
           DSM 4126]
          Length = 937

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL   ++P  K  V+     A    K +  P+ V  S +  G
Sbjct: 676 KLLADNDIPYPKFTVVEDADNALEMAKDIGFPMLVRPSYVLGG 718


>gi|260889104|ref|ZP_05900367.1| carbamoyl-phosphate synthase, large subunit [Leptotrichia hofstadii
           F0254]
 gi|260861164|gb|EEX75664.1| carbamoyl-phosphate synthase, large subunit [Leptotrichia hofstadii
           F0254]
          Length = 1074

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ +   PV +  +I ++  A   ++ +  P+ V
Sbjct: 146 RDLMNELGEPVPESDIIHNLEEARRFVEKIGYPVIV 181


>gi|290959875|ref|YP_003491057.1| phosphoribosylaminoimidazole carboxylase ATPase PurK [Streptomyces
           scabiei 87.22]
 gi|260649401|emb|CBG72516.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces scabiei 87.22]
          Length = 379

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 39/178 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  VP  +  +++      +      G   ++K+ +  G  GK            GV 
Sbjct: 110 LMEIGVPCPRHRIVADPDDVAAFAAEGEGFPVILKT-VRGGYDGK------------GVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S++      R               G  V     E+  D +REL  +++      + 
Sbjct: 157 VVRSVEDAAEPFR--------------AGVPV---LAEEKVDFVRELAANVVRSPHGQAV 199

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQARID 186
               + S Q     + V    P       +D  + +   E    +   L++ G   ++
Sbjct: 200 AYPVVESRQVNGVCDTVIAPAPD------LDEALALGAEEMALRIAKELDVVGHLAVE 251


>gi|255037030|ref|YP_003087651.1| alpha-L-glutamate ligase, RimK family [Dyadobacter fermentans DSM
           18053]
 gi|254949786|gb|ACT94486.1| alpha-L-glutamate ligase, RimK family [Dyadobacter fermentans DSM
           18053]
          Length = 300

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 14/81 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +  +L K  + + K V+  +       I  + GP  V+K               L     
Sbjct: 103 SMQVLAKAGIDIPKTVIAKNPAQVNELIHLVGGPPVVIK--------------LLEGTQG 148

Query: 68  GGVRVESSLKSVISDIREILG 88
            GV +  ++K+  S I    G
Sbjct: 149 VGVVLAETIKAAKSTIEAFYG 169


>gi|217978744|ref|YP_002362891.1| urea carboxylase [Methylocella silvestris BL2]
 gi|217504120|gb|ACK51529.1| urea carboxylase [Methylocella silvestris BL2]
          Length = 1172

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 34/206 (16%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + A+ + ++ N P+  G  ++ S   A    + +  P+                 K    
Sbjct: 117 HSAREVAQRANAPLLPGSGLLDSAEDALKEAERIGYPVM---------------LKSTAG 161

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+++      + +    +    L     G      N VY+E      R + + +  
Sbjct: 162 GGGIGMQLCFGPDELAARFESV--RRLGANNFGD-----NRVYLEKFVARARHVEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD-MLELQGQA 183
           D   G+VA       G     + +   + I +    P  G+T E  A+L +  + L    
Sbjct: 215 DGKGGVVAL------GERDCSLQRRNQKVIEET---PAPGLTDESRAALREAAIALGQAV 265

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN 209
             +       +Y A   +    LE+N
Sbjct: 266 NYESAGTVEFVYDA-DQQKFYFLEVN 290


>gi|183597479|ref|ZP_02958972.1| hypothetical protein PROSTU_00754 [Providencia stuartii ATCC 25827]
 gi|188023229|gb|EDU61269.1| hypothetical protein PROSTU_00754 [Providencia stuartii ATCC 25827]
          Length = 427

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + +  +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHKIPTAAYQNFTEIEPALAYLDKVGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      + ++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLAEAKDAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VVPM 209


>gi|150402525|ref|YP_001329819.1| PP-loop domain-containing protein [Methanococcus maripaludis C7]
 gi|150033555|gb|ABR65668.1| PP-loop domain protein [Methanococcus maripaludis C7]
          Length = 311

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 24/179 (13%)

Query: 11  LLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           +L ++   + K  ++   V+      +T      V   + H        FK+        
Sbjct: 65  ILNEFYKQIPKSKILAIIVNEGIEGYRTDGIDAAVKFCEEHGIEYRIVHFKDY------- 117

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTG----SRVNCVYVEDGADILRELYLSLLVD 125
             + ++L  ++   +E     L        G      +N V +E+  D     YL++  +
Sbjct: 118 --LGTNLDEIVKLAKE---KNLTMNPCSFCGVIRRKILNRVSIEEKCD-----YLAIGHN 167

Query: 126 -RTSGMVAFIASTQGGMD-IEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
                    +   +G +  +  + K      F   I PL  +  E+V  + D+LEL+  
Sbjct: 168 LDDVAQAVMMNYIEGDVKKLAFLGKSLKNPKFVKRIKPLEKIPEEEVLLIADLLELKYH 226


>gi|118576840|ref|YP_876583.1| biotin carboxylase [Cenarchaeum symbiosum A]
 gi|118195361|gb|ABK78279.1| biotin carboxylase [Cenarchaeum symbiosum A]
          Length = 476

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 10/116 (8%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           KA + K +VP   G   ++ S   A      +  P+  +KS    GGRG  R  E     
Sbjct: 104 KAAMLKADVPTVPGSPGLVGSADEAAGIASKIGYPVL-LKSVFGGGGRGI-RLAEDEGGL 161

Query: 67  KGG--VRVESSLKSVISDI---REILGSTLITKQTGPTGSRVNCVYVEDG-ADILR 116
           +GG       S+ +V        + L  T   +         N V++ +    I R
Sbjct: 162 RGGYDSATAESIAAVGKSAILVEKFLKRTRHIEYQMARDKHGNAVHIFERECSIQR 217


>gi|289665202|ref|ZP_06486783.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 349

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 71  KTLFRELGIPVPEFAAIDDRAGLDAALARIGTPC-VLKTR-RCGYDGKGQFR 120


>gi|149182327|ref|ZP_01860805.1| carbamoyl-phosphate synthase large subunit [Bacillus sp. SG-1]
 gi|148849946|gb|EDL64118.1| carbamoyl-phosphate synthase large subunit [Bacillus sp. SG-1]
          Length = 906

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L+   +P  +G    +V  A     ++  P+ V  S +  G
Sbjct: 674 LQSLGIPQPEGKTAVTVEGAVEIADSIGYPVLVRPSYVLGG 714


>gi|28631588|gb|AAL27793.2| carbamoyl phosphate synthetase II [Toxoplasma gondii]
          Length = 1687

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AK  L +    VA+    ++   A  A K +  P+ +  +    G
Sbjct: 597 AK--LEEIGEKVAESAAATNTEEAVQAAKAIGYPVLIRAAFALGG 639


>gi|327313497|ref|YP_004328934.1| phosphoribosylamine--glycine ligase [Prevotella denticola F0289]
 gi|326945982|gb|AEA21867.1| phosphoribosylamine--glycine ligase [Prevotella denticola F0289]
          Length = 422

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK+ ++++++P A        ++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKSFMKRHHIPTAAYETFDGKTIEEGMKFLETLKAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    ++RE+LG           G+    V +E+   
Sbjct: 158 ---GVLIVPTLEEAKKELREMLGGMF--------GNASAKVVIEEFLS 194


>gi|251780871|ref|ZP_04823791.1| phosphoribosylamine--glycine ligase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243085186|gb|EES51076.1| phosphoribosylamine--glycine ligase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 416

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+     SVH A   ++    P  VVK+   A G+             
Sbjct: 106 SKDFMKKYGVKTAEYATFISVHEALEYLENCTYPT-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + +  I  +       ++       G     + +E+  + +    LS+ 
Sbjct: 152 -GVIICENKEEAIEAVNTC----MVDDAFNGAGQ---KIVIEEFLEGVEASILSIT 199


>gi|209517572|ref|ZP_03266411.1| phosphoribosylamine/glycine ligase [Burkholderia sp. H160]
 gi|209501985|gb|EEA02002.1| phosphoribosylamine/glycine ligase [Burkholderia sp. H160]
          Length = 427

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+    + V AA  A     G   V+K+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYETFADV-AAAHAYLDAKGAPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E+      E    ++VD  
Sbjct: 152 -GVVVAQTLEEAHAAVD----MMLSDNKLGDAGARV---VIEEFL-AGEEASFIVMVDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +AS+Q 
Sbjct: 203 H--VLALASSQD 212


>gi|157813298|gb|ABV81394.1| putative rudimentary protein [Tanystylum orbiculare]
          Length = 200

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 4/48 (8%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L      +    VA      SV  A  A   L  P+ V  +    G
Sbjct: 101 RKLFADKVAEIGEQVAPSAAAYSVEQAVEAADKLGYPVLVRAAYALGG 148


>gi|320334713|ref|YP_004171424.1| acetyl-CoA carboxylase, biotin carboxylase [Deinococcus
           maricopensis DSM 21211]
 gi|319756002|gb|ADV67759.1| acetyl-CoA carboxylase, biotin carboxylase [Deinococcus
           maricopensis DSM 21211]
          Length = 445

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 9/105 (8%)

Query: 8   AKALLRKYNVP-VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE----- 61
            + +  + NVP V    V+ SV  A  A K +  P+  +K+    GGRG+   +      
Sbjct: 119 GRDIAAQSNVPTVPGTGVLDSVEDALFAAKNIGYPVL-LKASAGGGGRGQKVVRTQDELR 177

Query: 62  --LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVN 104
                  +           ++    E      +       G  ++
Sbjct: 178 SAFGQAQEEARLYFGDPAIIMEKFLEEFRHVEVQVMGDGQGHVIH 222


>gi|315640753|ref|ZP_07895855.1| phosphoribosylamine-glycine ligase [Enterococcus italicus DSM
           15952]
 gi|315483508|gb|EFU74002.1| phosphoribosylamine-glycine ligase [Enterococcus italicus DSM
           15952]
          Length = 418

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 22/128 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   NVP A          A   +        V+K+   A G+             
Sbjct: 107 AKEVMLSANVPTASYQAFDKFEDAILFLAEQEKYPIVIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  +    ++ + +++   +        G   + + +E+  +   E  L   VD  
Sbjct: 154 -GVIIAQTKDEALTTVEQLMKEQIF-------GESGSKIIIEEFLE-GEEFTLMAFVDGD 204

Query: 128 SGMVAFIA 135
           +      A
Sbjct: 205 AVYPMIPA 212


>gi|300214454|gb|ADJ78870.1| Phosphoribosylamine--glycine ligase [Lactobacillus salivarius CECT
           5713]
          Length = 418

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A   + KY++P AK    ++   A + +K    P+ +               KE    + 
Sbjct: 111 AMEFMDKYHIPTAKFKTYTTSDEAIAGLKEFDEPVVI---------------KEDGLAAG 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +    +IR +             G +   V +E+   +  E  + L++   
Sbjct: 156 KGVVIAQSYQEAEDEIRLMFR----------KGQK--KVVLEEFL-VGNEYSMFLVLSDK 202

Query: 128 SGMVAFIA 135
              +  +A
Sbjct: 203 GYRILPMA 210


>gi|294785436|ref|ZP_06750724.1| phosphoribosylamine--glycine ligase [Fusobacterium sp. 3_1_27]
 gi|294487150|gb|EFG34512.1| phosphoribosylamine--glycine ligase [Fusobacterium sp. 3_1_27]
          Length = 426

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  AK    +    A   +  +  P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYGIKTAKYQSFTDKEKAVKFLDEVSYPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + K     + ++    +  K     G   + V +E+  D +    +S+L    
Sbjct: 152 -GVVIAQNRKEAEDTLNDM----MTNKVFAAAG---DTVVIEEFLDGVE---ISVLSITD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SEVIIPFISAKDHKKISE 218


>gi|189463607|ref|ZP_03012392.1| hypothetical protein BACCOP_04331 [Bacteroides coprocola DSM 17136]
 gi|189429710|gb|EDU98694.1| hypothetical protein BACCOP_04331 [Bacteroides coprocola DSM 17136]
          Length = 389

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           AK L     +  AK     S    + A + +  P  V+K  + + G+G+   K 
Sbjct: 112 AKEL----GLKTAKYYYAKSFDELKEAAEKIGYPC-VIKPLMSSSGKGQSVAKG 160


>gi|169335683|ref|ZP_02862876.1| hypothetical protein ANASTE_02103 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258421|gb|EDS72387.1| hypothetical protein ANASTE_02103 [Anaerofustis stercorihominis DSM
           17244]
          Length = 456

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +A+ ++ +  VPV  G   +I +        K +  P+ ++K+    GGRG    +    
Sbjct: 118 EARKMMIEAGVPVVPGSKEIIKTADEGIKLAKEISYPV-IIKASNGGGGRGMRIVRSEE- 175

Query: 65  DSKGGVRVESSLKSVISDIREILG 88
                   E +  + +S+ +   G
Sbjct: 176 ------EFEDNFNNAVSEAKACFG 193


>gi|209548141|ref|YP_002280058.1| phosphoribosylamine--glycine ligase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533897|gb|ACI53832.1| phosphoribosylamine/glycine ligase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 427

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 24/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  +Y +P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDICARYGIPTGAYQRFNNAPKAKAYIRDQGVPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   ++ + +           G  G+ V    VE   D     +   L D  +
Sbjct: 152 GVTVAMTLDEALAAVDDCF-----EGAFGAAGAEV---VVEAYLDGEEASFFC-LCDGKN 202

Query: 129 GMVAFIA 135
            +    A
Sbjct: 203 ALPLATA 209


>gi|302185205|ref|ZP_07261878.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           syringae 642]
          Length = 431

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|260905178|ref|ZP_05913500.1| acid--CoA ligase [Brevibacterium linens BL2]
          Length = 704

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 35/233 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHA-AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+  +    VPV + + +S     AE    +   P +V+K+   A               
Sbjct: 471 ARDTISAAGVPVPRALTLSRGAELAEVVAGSDLTPPFVLKASWPA-----------HKTE 519

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG--ADILRELYLSLLV 124
            G + +  S  + + D        +        G  +    VE+    D   E+ +    
Sbjct: 520 LGAIALGLSDAAALEDA------YVKMVGRLGEGEYI----VEEMDTRDGAVEILVGGRQ 569

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFK---LLIDPLIGVTSEDVASLCDMLELQG 181
           D   G +  + +  GG + E     + +         +D +  +T      L      + 
Sbjct: 570 DENFGPIVMVGA--GGTETELYGDTWLELAPVSHAEALDMVSRLTCY--RLLTGWRGRRA 625

Query: 182 QARIDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKI--SFDDN 231
               +  ++  ++ +      ++  +EINP+ +  +G L  +D+ +  + DDN
Sbjct: 626 TDLDELAEIIVSVSRLIAGSNEIQEIEINPVRVTPDGAL-AVDALVVTNRDDN 677


>gi|315185545|gb|EFU19314.1| carbamoyl-phosphate synthase large subunit [Spirochaeta thermophila
           DSM 6578]
          Length = 1071

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 58/201 (28%), Gaps = 36/201 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            L+R+  +         ++    +  + +  P+ +  S +  G   K  F          
Sbjct: 674 DLVRRVGLNQPANRAARTLEEVRAFAEEIGYPVLLRPSFVLGG---KSMF---------- 720

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             +  S   +   +R          +  P       V V+   +   E  +  + D  + 
Sbjct: 721 --IAFSPDELEEFLRR-------GVEISPE----RPVLVDQFLEDAFEYDVDAVSDGENV 767

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
            +  I        I           +K   + L  +    V  +   L ++G   I    
Sbjct: 768 YIGGIMQHIEAAGIHSGDSACVFPPYKSNPEVLTQMKDATV-KIARALGVEGFLNIQY-- 824

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
                  A  D  + +LE+NP
Sbjct: 825 -------AVKDDVLYVLEVNP 838


>gi|308188922|ref|YP_003933053.1| phosphoribosylamine--glycine ligase [Pantoea vagans C9-1]
 gi|308059432|gb|ADO11604.1| phosphoribosylamine--glycine ligase [Pantoea vagans C9-1]
          Length = 426

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHQIPSAAYQNFTDVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|297156125|gb|ADI05837.1| hypothetical protein SBI_02716 [Streptomyces bingchenggensis BCW-1]
          Length = 721

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 291 GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG----ILSAV 346
           GA  N +D+ GG       A  ++   D  +  +++  +  I+   ++       ++   
Sbjct: 603 GAAGNPVDITGGEPPATYEATIRLGLEDPRIHALVLGYWHTIVTPPMVFAELTARVVEEF 662

Query: 347 KEVKINIPLVMRLEG-ANVDIGNRLIAESGLNVITAID 383
           +   I+ P+V  L G   V+  ++ + E G+       
Sbjct: 663 RARGIHKPVVASLAGDTEVEEASQYLFEHGVVAYPYTT 700



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 19/227 (8%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           + K +   Y +P     +      A +    +  P+ +         +       +   S
Sbjct: 37  EGKLITDAYGIPTPAEGLAECADDAVALADRIGFPVALKIVSPDILHKTDAGGVRVGLTS 96

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI-LRELYLSLLVD 125
              VR   +               +   +     +R+  V V+       +E+ +  + D
Sbjct: 97  AAEVRGAFTA-------------IVTNARAYDPKARIKGVQVQQMVPAGGQEVIVGAVTD 143

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
            T G V       GG+ +E +     +       D L  + S   A +   +       R
Sbjct: 144 PTFGKVVAFG--LGGVLVEVLKDITFRLAPASRDDALSMLDSIRAAEVLRGVRGGAAVDR 201

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDD 230
                L   + +   D  +++ +++NP+    +G +   D +I   D
Sbjct: 202 EALAGLVVRVSRLAADFPEVAEVDLNPVFASASG-VLAADVRILLSD 247


>gi|239832077|ref|ZP_04680406.1| acetyl-CoA carboxylase, biotin carboxylase [Ochrobactrum
           intermedium LMG 3301]
 gi|239824344|gb|EEQ95912.1| acetyl-CoA carboxylase, biotin carboxylase [Ochrobactrum
           intermedium LMG 3301]
          Length = 669

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G   +I     A     ++  P+ +  S                  
Sbjct: 121 SKKLAAEAGVSTVPGHMGLIEDADEAVKIAGSIGYPVMIKAS---------------AGG 165

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  +            G  L   +   +    + +++E      R + + +L D
Sbjct: 166 GGKGMRIAWNDDEARE------GFQLSRNEAKSSFGD-DRIFIEKFVTQPRHIEIQVLGD 218

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLE-LQGQA 183
           +  G V ++   +    I+   +   ++     +D        E   +L   +       
Sbjct: 219 QH-GNVVYLGERE--CSIQRRNQKVIEEAPSPFLDEATRKAMGEQAVALAKAVGYFSAGT 275

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D   N Y  F + +  L   +P+  +  G
Sbjct: 276 VEFIVDGNRNFY--FLEMNTRLQVEHPVTELITG 307


>gi|257051158|ref|YP_003128991.1| carbamoyl phosphate synthase large subunit [Halorhabdus utahensis
           DSM 12940]
 gi|256689921|gb|ACV10258.1| carbamoyl-phosphate synthase, large subunit [Halorhabdus utahensis
           DSM 12940]
          Length = 1073

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 33/181 (18%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + K   PV     I S+   E+A++ + G   ++++    GG G G              
Sbjct: 135 MEKIGEPVPASTTIKSMDEVEAAVEEVGGLPVIMRTTYTLGGAGSG-------------- 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD--ILRELYLSLLVDRTSG 129
           V   +  +    R+  G  L              V + +  D  I  E  +     R + 
Sbjct: 181 VIGDMDELKEATRK--GLRLSRDD---------RVMITESIDGWIELEYEVM----RDAD 225

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARIDG 187
               I      +D   +       +    + P  G     +    +   LE+ G   I  
Sbjct: 226 DSCIIICNMENLDPMGIHTGESMVVTPSQVIPDEGHQEMRDTALKVIRELEIHGGCNIQF 285

Query: 188 G 188
            
Sbjct: 286 A 286


>gi|218131527|ref|ZP_03460331.1| hypothetical protein BACEGG_03146 [Bacteroides eggerthii DSM 20697]
 gi|217986459|gb|EEC52796.1| hypothetical protein BACEGG_03146 [Bacteroides eggerthii DSM 20697]
          Length = 687

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 28/226 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q +ALLR   +PV +  V ++     +  +    P+             K       +D
Sbjct: 486 HQVQALLRSAGIPVVEEFVSANEEEVLAFARRAGFPVV-----------AKVVGPVHKSD 534

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G V    S + +  +   ++               V  + V+       EL++    +
Sbjct: 535 VGGVVLNIKSEQHLALEFERMMQIP-----------EVTGIMVQPMLK-GTELFIGAKYE 582

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
              G V       GG+ +E +             +    + S     +       +G   
Sbjct: 583 EKFGHVVL--CGLGGIFVEVLKDVSSGLAPLSYDEAYSMIHSLRAYKIIKGTRGQKGVNE 640

Query: 185 IDGGDLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
               ++   L        ++  ++INPL+  +   +  +D++I  +
Sbjct: 641 DKFAEIIVRLSTLLRFATEIKEMDINPLLATE-KYVIAVDARIRIE 685


>gi|124515275|gb|EAY56785.1| Carbamoyl-phosphate synthase, large subunit [Leptospirillum
           rubarum]
          Length = 1080

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    +   +  V  S+  A SA+  L  P+ +  S    G             S G
Sbjct: 133 KKAMESIGLASPRSFVAHSMAEARSALGELSFPIMIRPSFTLGG-------------SGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +L+     +           Q G   S V  V VE+     +E  L ++  R  
Sbjct: 180 GV--VFNLEEFEQRV-----------QVGLEMSPVREVLVEESLLGWKEFELEVV--RDK 224

Query: 129 GMVAFIASTQGGMDI 143
              A I  +   +D 
Sbjct: 225 ADNAIIVCSIENLDP 239


>gi|46198555|ref|YP_004222.1| carbamoyl phosphate synthase large subunit [Thermus thermophilus
           HB27]
 gi|47606747|sp|P96495|CARB_THET2 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|46196177|gb|AAS80595.1| carbamoyl-phosphate synthase large chain [Thermus thermophilus
           HB27]
          Length = 1028

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AL ++  +P  +G V  S   A      +  PL V  S +  G
Sbjct: 675 ALCQRLGIPQPEGRVAQSPEEALRLAPEVGFPLLVRPSYVLGG 717


>gi|256751680|ref|ZP_05492555.1| D-alanine/D-alanine ligase [Thermoanaerobacter ethanolicus CCSD1]
 gi|307265111|ref|ZP_07546671.1| D-alanine/D-alanine ligase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|256749489|gb|EEU62518.1| D-alanine/D-alanine ligase [Thermoanaerobacter ethanolicus CCSD1]
 gi|306919909|gb|EFN50123.1| D-alanine/D-alanine ligase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 359

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 53/201 (26%), Gaps = 64/201 (31%)

Query: 9   KALLRKYNVPVAKGVVIS-----SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           K + ++  +P    VV+       + A +  ++ L  P +V               K   
Sbjct: 141 KRIFKEAGLPTPDFVVVYRKEIEDLEAIKKKVEHLGYPCFV---------------KPAN 185

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
             S  G+    + + +   ++                     + +E G D  RE+  S+L
Sbjct: 186 LGSSVGITKVHNEEELPGALK-------------LAAKYDRKLLIERGID-AREIECSVL 231

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            +                       + PQ      I P       +          L   
Sbjct: 232 GN-----------------------ENPQASIAGEIVPSNEFYDYNAKYFDGGKSLLLIP 268

Query: 177 LELQGQARIDGGDLFPNLYKA 197
             L  +   +   L    YKA
Sbjct: 269 APLPDEKMEEVRQLAIKAYKA 289


>gi|238765062|ref|ZP_04625998.1| hypothetical protein ykris0001_30300 [Yersinia kristensenii ATCC
           33638]
 gi|238696748|gb|EEP89529.1| hypothetical protein ykris0001_30300 [Yersinia kristensenii ATCC
           33638]
          Length = 887

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 488 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAERLGYPVAI---------KLRSPDI 536

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 537 AHKSEVQGVMLYLRTAMEVQRAADDILDRVKRTYPQA----RIDGLLVQSMANRAGAQEL 592

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 593 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 647

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
               LQ         L   +     D  ++S L+I+P++   +
Sbjct: 648 SRGSLQPLDIPGLSRLLVQVSNLILDCPEISRLDIHPVLASGS 690


>gi|257069458|ref|YP_003155713.1| phosphoribosylamine--glycine ligase [Brachybacterium faecium DSM
           4810]
 gi|256560276|gb|ACU86123.1| phosphoribosylamine--glycine ligase [Brachybacterium faecium DSM
           4810]
          Length = 433

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 17/83 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKT---LPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK ++    VP A  V I++     + +     L    YVVK+   A G+          
Sbjct: 106 AKEIMAAAGVPTAASVTITAAEQLAAGLDRVNPLGDVPYVVKADGLAAGK---------- 155

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
               GV V +   + ++    +L
Sbjct: 156 ----GVVVTTDRDAAVTHAEAVL 174


>gi|237843095|ref|XP_002370845.1| carbamoyl phosphate synthetase II [Toxoplasma gondii ME49]
 gi|211968509|gb|EEB03705.1| carbamoyl phosphate synthetase II [Toxoplasma gondii ME49]
          Length = 1699

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AK  L +    VA+    ++   A  A K +  P+ +  +    G
Sbjct: 609 AK--LEEIGEKVAESAAATNTEEAVQAAKAIGYPVLIRAAFALGG 651


>gi|210623079|ref|ZP_03293566.1| hypothetical protein CLOHIR_01516 [Clostridium hiranonis DSM 13275]
 gi|210153882|gb|EEA84888.1| hypothetical protein CLOHIR_01516 [Clostridium hiranonis DSM 13275]
          Length = 450

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+  ++K  VPV  G   V+     A+   + +  P+ ++K+    GGRG
Sbjct: 121 ARRTMQKLGVPVVPGSKAVLKDKEEAKKMAEEIGYPV-MIKASAGGGGRG 169


>gi|15669414|ref|NP_248224.1| pyruvate carboxylase subunit A [Methanocaldococcus jannaschii DSM
           2661]
 gi|2493313|sp|Q58626|PYCA_METJA RecName: Full=Pyruvate carboxylase subunit A; AltName: Full=Pyruvic
           carboxylase A
 gi|1591860|gb|AAB99232.1| biotin carboxylase (accC) [Methanocaldococcus jannaschii DSM 2661]
          Length = 501

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK +++K  VP+  G    I  +  A    + +  P+ V
Sbjct: 119 AKKIMKKAGVPLIPGSEGAIEDIDEAIEIAEAIGFPVVV 157


>gi|88856235|ref|ZP_01130895.1| carbamoylphosphate synthase, large chain [marine actinobacterium
           PHSC20C1]
 gi|88814554|gb|EAR24416.1| carbamoylphosphate synthase, large chain [marine actinobacterium
           PHSC20C1]
          Length = 1104

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 26/124 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    +   K    ++   A +  + +  P+ V  S +  G                G
Sbjct: 677 EILDNAGLLAPKNGTATNQAEAITIAEEIGYPVLVRPSHVLGG---------------RG 721

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-------RELYLSL 122
           + +     ++      +    +I+K +      V+    +D  +I         ELY+  
Sbjct: 722 MEIVYDTDALADYFERVRDLVIISKTSP---LLVDRFL-DDAIEIDIDAIYDGNELYVGG 777

Query: 123 LVDR 126
           +++ 
Sbjct: 778 IMEH 781


>gi|330807316|ref|YP_004351778.1| phosphoribosylamine--glycine ligase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375424|gb|AEA66774.1| Phosphoribosylamine--glycine ligase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 431

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|206601579|gb|EDZ38062.1| Carbamoyl-phosphate synthase, large subunit [Leptospirillum sp.
           Group II '5-way CG']
          Length = 1080

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 28/135 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    +   +  V  S+  A SA+  L  P+ +  S    G             S G
Sbjct: 133 KKAMESIGLASPRSFVAHSMAEARSALGELSFPIMIRPSFTLGG-------------SGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV    +L+     +           Q G   S V  V VE+     +E  L ++  R  
Sbjct: 180 GV--VFNLEEFEQRV-----------QVGLEMSPVREVLVEESLLGWKEFELEVV--RDK 224

Query: 129 GMVAFIASTQGGMDI 143
              A I  +   +D 
Sbjct: 225 ADNAIIVCSIENLDP 239


>gi|156743118|ref|YP_001433247.1| phosphoribosylamine--glycine ligase [Roseiflexus castenholzii DSM
           13941]
 gi|156234446|gb|ABU59229.1| phosphoribosylamine--glycine ligase [Roseiflexus castenholzii DSM
           13941]
          Length = 418

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  +P A+  +     +A   ++T     +VVK+   A G+G    + +     
Sbjct: 106 AKRLMIEAGIPTAEAHIFDDPDSAADFVRT-TCRTWVVKADGLAAGKGVIVPESVGDTLD 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSR 102
               + ++       + E L    ++      G R
Sbjct: 165 AIRMLSATRAGARLVLEERLSGPEVSLIALCDGER 199


>gi|323467379|gb|ADX71066.1| Biotin carboxylase [Lactobacillus helveticus H10]
          Length = 468

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           A+  + K  VPV  G   V+ +V  AE+  + +  P+ 
Sbjct: 128 AREAMEKAGVPVIPGSQGVVKTVSQAETVAEKIGFPVL 165


>gi|262202170|ref|YP_003273378.1| CoA-binding domain-containing protein [Gordonia bronchialis DSM
           43247]
 gi|262085517|gb|ACY21485.1| CoA-binding domain protein [Gordonia bronchialis DSM 43247]
          Length = 950

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            +  +LR Y + V     ++++H A +A + L  P+ V K+      RG+   +    D 
Sbjct: 735 DSARILRWYGIEVVPFREVTTMHEASAAARALGFPVAV-KATSPTW-RGRLDREGARLDL 792

Query: 67  KGGVRVESSLKSVIS 81
                V ++   +  
Sbjct: 793 PDATAVVNAFAELTE 807


>gi|221502459|gb|EEE28186.1| carbamoyl phosphate synthetase II, putative [Toxoplasma gondii VEG]
          Length = 1699

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AK  L +    VA+    ++   A  A K +  P+ +  +    G
Sbjct: 609 AK--LEEIGEKVAESAAATNTEEAVQAAKAIGYPVLIRAAFALGG 651


>gi|221482162|gb|EEE20523.1| carbamoyl phosphate synthetase II, putative [Toxoplasma gondii GT1]
          Length = 1699

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AK  L +    VA+    ++   A  A K +  P+ +  +    G
Sbjct: 609 AK--LEEIGEKVAESAAATNTEEAVQAAKAIGYPVLIRAAFALGG 651


>gi|188588366|ref|YP_001920444.1| CoA-binding domain protein [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498647|gb|ACD51783.1| CoA-binding domain protein [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 471

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 82/237 (34%), Gaps = 44/237 (18%)

Query: 196 KAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRDVSEEDSREIEA 255
           +AF D         P++ +K G  + +  K +F   A           D   E++  I A
Sbjct: 229 EAFIDVCKKFNHKKPIVTIKVGGSK-IGVKAAFAHTASENEGTDDAYYDEIFEEAGAIRA 287

Query: 256 KQHN---------LSYIALDG-NIGCMVNGAGLAMATMDIIKLYG--------------- 290
                         S  +L G N+  + NG G  + + D  +  G               
Sbjct: 288 TTWQEFLDMSLALGSQPSLKGENVVMITNGGGSGLLSCDHFERCGMPLKELKEISPGLGE 347

Query: 291 ---------GAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKG 341
                    G+P N +D+ G A   +   AF     D +V G+L +I    +    +V  
Sbjct: 348 RIKAYMPMFGSPLNPVDISGTASPIQYKGAFTQAMRDPNVHGVLGSICPTAVTDVDVVVD 407

Query: 342 ILSAVKEV--KINIPLVMRLEGANV-DIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395
           I+  + E    +N P +M  +G          + + G+           A++ V+A+
Sbjct: 408 IVIELHETYKHLNKPFIMECQGGEECHRAIMKLRDHGIPAYPT------AEQSVNAM 458


>gi|119479793|ref|XP_001259925.1| carboxylase:pyruvate/acetyl-CoA/propionyl-CoA [Neosartorya fischeri
           NRRL 181]
 gi|119408079|gb|EAW18028.1| carboxylase:pyruvate/acetyl-CoA/propionyl-CoA [Neosartorya fischeri
           NRRL 181]
          Length = 644

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           QAKAL     VPV       S+    + ++ +  P+ +
Sbjct: 116 QAKALATSCGVPVLPSHSAQSLDEIRAFVENVGYPVMI 153


>gi|94502108|ref|ZP_01308610.1| acetyl-CoA carboxylase [Oceanobacter sp. RED65]
 gi|94425745|gb|EAT10751.1| acetyl-CoA carboxylase [Oceanobacter sp. RED65]
          Length = 473

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           QA+A +RK  VPV  G    +++V  A      +  P+ V
Sbjct: 119 QARASMRKAGVPVTPGSEGNLATVEEAIELANEIGYPVMV 158


>gi|90961648|ref|YP_535564.1| phosphoribosylamine--glycine ligase [Lactobacillus salivarius
           UCC118]
 gi|227890736|ref|ZP_04008541.1| phosphoribosylamine--glycine ligase [Lactobacillus salivarius ATCC
           11741]
 gi|90820842|gb|ABD99481.1| Phosphoribosylamine--glycine ligase [Lactobacillus salivarius
           UCC118]
 gi|227867674|gb|EEJ75095.1| phosphoribosylamine--glycine ligase [Lactobacillus salivarius ATCC
           11741]
          Length = 418

 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A   + KY++P AK    ++   A + +K    P+ +               KE    + 
Sbjct: 111 AMEFMDKYHIPTAKFKTYTTSDEAIAGLKEFDEPVVI---------------KEDGLAAG 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +    +IR +             G +   V +E+   +  E  + L++   
Sbjct: 156 KGVVIAQSYQEAEDEIRLMFR----------KGQK--KVVLEEFL-VGNEYSMFLVLSDK 202

Query: 128 SGMVAFIA 135
              +  +A
Sbjct: 203 GYRILPMA 210


>gi|328464247|gb|EGF35687.1| biotin carboxylase [Lactobacillus helveticus MTCC 5463]
          Length = 466

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           A+  + K  VPV  G   V+ +V  AE+  + +  P+ 
Sbjct: 126 AREAMEKAGVPVIPGSHGVVKTVSQAETVAEKIGFPVL 163


>gi|304408813|ref|ZP_07390434.1| CoA-binding domain protein [Shewanella baltica OS183]
 gi|307302816|ref|ZP_07582571.1| CoA-binding domain protein [Shewanella baltica BA175]
 gi|304352634|gb|EFM17031.1| CoA-binding domain protein [Shewanella baltica OS183]
 gi|306913176|gb|EFN43598.1| CoA-binding domain protein [Shewanella baltica BA175]
          Length = 901

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLYG 290
           A +R   +  + D+ E  +        N     L G  +G + NG G A+  +D + + G
Sbjct: 270 AAFRRAGMLRVNDLIELFAAVESLAHSN----PLQGERLGIISNGGGPAVLAVDELIMRG 325

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G  A                     N +D+ G A+  + A A  I+   + +  IL+
Sbjct: 326 GKLAELSDDTIAKLEAVLPNTWSRQNPIDIIGDANASRYAKALTILMDSNELDAILV 382


>gi|288556678|ref|YP_003428613.1| phosphoribosylglycinamide formyltransferase 2 [Bacillus
           pseudofirmus OF4]
 gi|288547838|gb|ADC51721.1| phosphoribosylglycinamide formyltransferase 2 [Bacillus
           pseudofirmus OF4]
          Length = 399

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 25/137 (18%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P A      S+   + A+  +  P  V+K  + + G+G+               +  +
Sbjct: 124 GLPTANYAFADSLEELKEAVAEIGTPC-VIKPLMSSSGKGQ--------------TLCKT 168

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-I 134
            + V S   E +         G  G     V VE+      E+ L  +   +       I
Sbjct: 169 FEDVESSWNEAI--------EGGRGKS-TRVIVEEFIHFDSEITLLTVRSVSGTSYCAPI 219

Query: 135 ASTQGGMDIEEVAKDYP 151
              Q G D  +  + + 
Sbjct: 220 GHVQKGGDYIQSWQPHQ 236


>gi|290957731|ref|YP_003488913.1| ATP-binding biosynthetic protein [Streptomyces scabiei 87.22]
 gi|260647257|emb|CBG70362.1| putative ATP-binding biosynthetic enzyme [Streptomyces scabiei
           87.22]
          Length = 393

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           A+ L  ++ VP A  +   ++  AE A +TL  P  V+K    AG
Sbjct: 89  ARTLFARHGVPSAASMTARTLREAERATRTLGFP-AVIKPAAAAG 132


>gi|229170664|ref|ZP_04298308.1| Biotin carboxylase [Bacillus cereus AH621]
 gi|228612824|gb|EEK70005.1| Biotin carboxylase [Bacillus cereus AH621]
          Length = 445

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 99/331 (29%), Gaps = 53/331 (16%)

Query: 12  LRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ++  +VPV  G+   I +   A    K +  P  ++K+    GG G              
Sbjct: 123 MQAADVPVVPGITTNIETAEEAIEIAKQIGYP-LMLKASAGGGGIGM-----------QL 170

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +  E +L       +    +     +        +  ++E          + LL D    
Sbjct: 171 METEQTLTKAFESNKTRAQNFFGNGEMYLERYIADAHHIE----------IQLLADTHGN 220

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-----VTSEDVASLCDMLELQGQAR 184
            V          + E   +   QK+ +    P +         E        L       
Sbjct: 221 TVYL-------WERECSVQRRNQKVIEEAPSPFLDEGTRKAMGEVAVQAAKALGYTNAGT 273

Query: 185 IDG-GDLFPNLYKAFCDKDMSLL-------EINPLIIMKNGRLRVLDSKISFDDNALYRH 236
           ++   D   N Y  F + +  L        EI  L +++   L     K+SF  + + R 
Sbjct: 274 VEFLVDDQKNFY--FLEMNTRLQVEHPVTEEITGLDLVEQQLLIAYGEKLSFTQDDVKRS 331

Query: 237 LDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANF 296
               E R +  ED +        ++ + L  NI               +       P   
Sbjct: 332 GHAIEAR-IYAEDPKTFFPSPGKITDLTLPTNIRI------DHFLENQVTITPFYDPMIA 384

Query: 297 LDVGGGADQDKVAAAFKIITSDSSVKGILIN 327
             +  G  +++  +  KI   +  ++GI  N
Sbjct: 385 KVIAHGETREEAISKLKIALEELKIEGIKTN 415


>gi|196228041|ref|ZP_03126908.1| carbamoyl-phosphate synthase, large subunit [Chthoniobacter flavus
           Ellin428]
 gi|196227444|gb|EDY21947.1| carbamoyl-phosphate synthase, large subunit [Chthoniobacter flavus
           Ellin428]
          Length = 1109

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 51/171 (29%), Gaps = 33/171 (19%)

Query: 7   QA-KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           QA K  + K  + + +     ++         +     +++     GG G G        
Sbjct: 130 QAFKEAMIKIGLDLPRSGTAHTMEEGRKVAAEIGTMPLIIRPAFTLGGSGGG-------- 181

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  + +     +   L  +            V+ V +E+     +E  + ++ D
Sbjct: 182 ------IAYNKEEFEIIVARGLDLS-----------PVSEVLIEESLLGWKEFEMEVMRD 224

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           +       I S      IE V          + + P   ++  +  ++ D 
Sbjct: 225 KADNC-VIICS------IENVDPMGVHTGDSITVAPAQTLSDREYQNMRDA 268


>gi|114570624|ref|YP_757304.1| D-alanine--D-alanine ligase [Maricaulis maris MCS10]
 gi|122315584|sp|Q0AMX1|DDL_MARMM RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|114341086|gb|ABI66366.1| D-alanine--D-alanine ligase [Maricaulis maris MCS10]
          Length = 304

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 36/203 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +LR   +P  +G++ +   AA++ +     P YV K       +G      +  +  
Sbjct: 100 AKDVLRAAGIPCPEGIIANRFEAAKAHVMK---PPYVAKP----NAQGSSVGVHIVLEGA 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
                      + S    +    LI                 +     REL ++++ DR 
Sbjct: 153 N-----RPPAELGSTAWALGDEILI-----------------ERYVPGRELTVAVMEDRA 190

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQARID 186
             +     +T       +        I    I   I  +  +        L  +G  R D
Sbjct: 191 LCVTEIKPNTTFYDYEAKYTAGGSDHILPAPISAEIAELAMDLAVRAHRALGCRGMTRSD 250

Query: 187 GGDLFPNLYKAFCDKDMSLLEIN 209
                   Y +  D  + LLEIN
Sbjct: 251 FR------YDSAADTPLWLLEIN 267


>gi|332830295|gb|EGK02923.1| phosphoribosylamine-glycine ligase [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 423

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 28/131 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESA---IKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
            K  + ++N+P A+     ++   E A   ++ L  P YV+K+   A G+          
Sbjct: 110 GKQFMMRHNIPTARYR-SFTLEQLEDAYSFLEELEAP-YVLKADGLAAGK---------- 157

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               GV + + L     +++E+LG           G     V +E+      E  + +L 
Sbjct: 158 ----GVLILNDLNEAKRELKEMLGGMF--------GEASKTVVIEEFLS-GIECSVFVLT 204

Query: 125 DRTSGMVAFIA 135
           D  S  +  +A
Sbjct: 205 DGDSYKILPVA 215


>gi|319786448|ref|YP_004145923.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464960|gb|ADV26692.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 393

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV     I S    E A+  +  P  ++K++   G  GKG+F+
Sbjct: 116 KTLFRELGIPVPAFAAIDSREGLERALDEVGVPC-ILKTRRL-GYDGKGQFR 165


>gi|300309729|ref|YP_003773821.1| biotin carboxylase [Herbaspirillum seropedicae SmR1]
 gi|300072514|gb|ADJ61913.1| biotin carboxylase protein [Herbaspirillum seropedicae SmR1]
          Length = 459

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 116/337 (34%), Gaps = 53/337 (15%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + +  VP V    G +  +        + +  P+ +  +                 
Sbjct: 119 AKQAMIRAGVPCVPGSDGALPDNPKEIVQIARKIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  +   G+     +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALINAVTMTKTEAGAAFGNPE----------VYMEKYLENPRHVEIQILA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM-LELQGQA 183
           D     +        G     + + + + I +    P  G+  + +  + +   E   + 
Sbjct: 217 DEHKQAIWL------GERDCSMQRRHQKVIEEA---PAPGIPRKIIEKIGERCAEACRKM 267

Query: 184 RIDGGDLFPNLYKA----FCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238
              G   F  LY+     F + +  +   +P+  M  G  +     +I+  +   YR  D
Sbjct: 268 NYRGAGTFEFLYENEEFYFIEMNTRVQVEHPVTEMITGVDIVQEQIRIAAGEKLRYRQRD 327

Query: 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGAPANF 296
           I EL+  + E     E       +I   G I    +  G G+ + +      +   P N+
Sbjct: 328 I-ELKGHAIECRINAE---DPFKFIPSPGRITAWHVPGGPGIRVDSHAYSGYF--VPPNY 381

Query: 297 LDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
             + G     GA +++     +I  S+  V+GI  NI
Sbjct: 382 DSMVGKVIAYGATREQAIRRMQIALSEMVVEGISTNI 418


>gi|148828068|ref|YP_001292821.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae PittGG]
 gi|148719310|gb|ABR00438.1| phosphoribosylamine--glycine ligase [Haemophilus influenzae PittGG]
          Length = 429

 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L  + +P A+    + V  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLACHKIPTAEYQNFTEVEPALAYLREKGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV V  +L+     +R++L         G  G   + V +E+  D
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLD 191


>gi|326406894|gb|ADZ63965.1| carbamoyl-phosphate synthase large subunit [Lactococcus lactis
           subsp. lactis CV56]
          Length = 1064

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +   P+    + ++V  A      +  P+ V  +                  + G
Sbjct: 133 KELCERIGEPLCASDIATTVDEAVEIADKIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +   +             G   S V    +E+     +E+   ++ D   
Sbjct: 180 GI--CDTEEELREIVAN-----------GLKLSPVTQCLIEESIAGYKEIEYEVMRDSAD 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 NAIVV 231


>gi|309807411|ref|ZP_07701374.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 01V1-a]
 gi|308169333|gb|EFO71388.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 01V1-a]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|291545236|emb|CBL18345.1| acetyl-CoA carboxylase, biotin carboxylase [Ruminococcus sp. 18P13]
          Length = 452

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 8   AKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  ++   VPV   + G+V   + +A+     +  PL + K+    GGRG
Sbjct: 119 AKQTMQAAGVPVIPGSDGIVAD-LASAKEIAAKIGYPLLI-KASAGGGGRG 167


>gi|294668259|ref|ZP_06733364.1| hypothetical protein NEIELOOT_00170 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309778|gb|EFE51021.1| hypothetical protein NEIELOOT_00170 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 422

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A      +   A   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMKRHGIPTAGYQTFDNAQQAHDYVDAKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLAEAHAAIDDML----LGNKMGNAGARV 182


>gi|260460953|ref|ZP_05809202.1| CoA-binding domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259032987|gb|EEW34249.1| CoA-binding domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 692

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 71/217 (32%), Gaps = 28/217 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E QAKA L    +PV KG    +   A  +   L  P+ +           K       +
Sbjct: 484 EAQAKARLIMAGLPVPKGERAGNAVEAVISSMALGFPVAL-----------KALGVTHKS 532

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +           +SV +   ++L           TG  V    V DG     EL +    
Sbjct: 533 EVGAVRLNLKDAESVSTAAHDLLPL--------GTGLYVER-MVRDGV---AELIVGFTR 580

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D   G V  + +  GG+ +E +       +     D    +    +  L +    + +A 
Sbjct: 581 DPMFGAVMTLGT--GGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD 638

Query: 185 IDGGDLFPNLYKAFCDKDMSLLE---INPLIIMKNGR 218
           +           AF   +   +E   INPLI+   G+
Sbjct: 639 VQAAIDAIAGIAAFVQTNAGEIEELDINPLIVCAEGK 675


>gi|256845261|ref|ZP_05550719.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 3_1_36A2]
 gi|256718820|gb|EEU32375.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 3_1_36A2]
          Length = 426

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY +  AK    +    A   +  +  P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYGIKTAKYQSFTDKEKAVKFLDEVSYPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  + K     + ++    +  K     G   + V +E+  D +    LS+ 
Sbjct: 152 -GVVIAQNRKEAEDTLNDM----MTNKVFAAAG---DTVVIEEFLDGVEISVLSIT 199


>gi|227432311|ref|ZP_03914304.1| phosphoribosylamine--glycine ligase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227351917|gb|EEJ42150.1| phosphoribosylamine--glycine ligase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 413

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K +L+KYN+P A+ + ++S + A  AI     P+ V K    A G+G
Sbjct: 109 KNILQKYNIPTAQSMTVTSFNEANQAIAKFGFPI-VFKLDGLALGKG 154


>gi|219121664|ref|XP_002181182.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407168|gb|EEC47105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1237

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 15/81 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTL-PGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +K  L+++ +P AK    + V  A + +++L      VVK+   A G+            
Sbjct: 371 SKDFLQEHGIPTAKYRNFTDVSEAIAYVESLDESDRQVVKASGLAAGK------------ 418

Query: 67  KGGVRVESSLKSVISDIREIL 87
             GV + ++    I+ ++EI+
Sbjct: 419 --GVLLPTNKADTIAAVKEIM 437


>gi|169153848|emb|CAQ15408.1| propionyl-Coenzyme A carboxylase, alpha polypeptide [Danio rerio]
 gi|169158758|emb|CAQ15187.1| propionyl-Coenzyme A carboxylase, alpha polypeptide [Danio rerio]
          Length = 720

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K + +   V    G   V+     A      +  P+ +  S                 
Sbjct: 171 ESKLIAKAAKVNTIPGFDGVVKDAEEAVKIAGEIGYPVMIKAS---------------AG 215

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 216 GGGKGMRIAWNDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 268

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   SL   ++     
Sbjct: 269 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPDTRRKMGEQAVSLAKAVKYSSAG 325

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 326 TVEFLVDSKKNFY--FLEMNTRLQVEHPITECITG 358


>gi|78188950|ref|YP_379288.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like
           [Chlorobium chlorochromatii CaD3]
 gi|78171149|gb|ABB28245.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II-like protein
           [Chlorobium chlorochromatii CaD3]
          Length = 1086

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY 43
           +K L +    PV K  V ++   A +  K L  PL 
Sbjct: 713 SKRL-KNAGFPVPKHAVANTFEEALNIAKKLKFPLV 747


>gi|55980581|ref|YP_143878.1| carbamoyl phosphate synthase large subunit [Thermus thermophilus
           HB8]
 gi|81821888|sp|Q5SKN1|CARB_THET8 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|55771994|dbj|BAD70435.1| carbamoyl-phosphate synthase large chain [Thermus thermophilus HB8]
          Length = 1028

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           AL ++  +P  +G V  S   A      +  PL V  S +  G
Sbjct: 675 ALCQRLGIPQPEGRVAQSPEEALRLAPEVGFPLLVRPSYVLGG 717



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           +++  + V +G ++ SV       + +  P+ V         R                 
Sbjct: 136 MQRIGLEVPRGQLVGSVEEGLHFAREVGFPVVV---------RPSFTLGGTGGG------ 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +      ++  +    G TL           V+   VE+     +E  L ++ D  +  V
Sbjct: 181 IAHDEAELVEVLSR--GLTLS---------PVHTALVEESVLGWKEFELEVMRD-HADTV 228

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLE 178
             I S      IE V          + + P   ++  +   + D  +
Sbjct: 229 VIITS------IENVDPMGVHTGDSITVAPAQTLSDVEYQRMRDAAK 269


>gi|325299366|ref|YP_004259283.1| Phosphoribosylamine--glycine ligase [Bacteroides salanitronis DSM
           18170]
 gi|324318919|gb|ADY36810.1| Phosphoribosylamine--glycine ligase [Bacteroides salanitronis DSM
           18170]
          Length = 424

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSV--HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++ +P A    I+S       + ++TL  P YV+K+     G+           
Sbjct: 110 AKGFMQRHGIPTAGYKSITSANLEEGLAFLETLQAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G+    V +E+   
Sbjct: 158 ---GVLILPTLEEAKKELKEMLGGMF--------GNASATVVIEEFLS 194


>gi|297694346|ref|XP_002824440.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like isoform 1 [Pongo abelii]
          Length = 728

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDVETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|291387039|ref|XP_002709852.1| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase [Oryctolagus cuniculus]
          Length = 2192

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     SS+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAASSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|282898689|ref|ZP_06306677.1| Acetyl-CoA carboxylase, biotin carboxylase [Cylindrospermopsis
           raciborskii CS-505]
 gi|281196557|gb|EFA71466.1| Acetyl-CoA carboxylase, biotin carboxylase [Cylindrospermopsis
           raciborskii CS-505]
          Length = 448

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 36/274 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G   ++ +     +    +  P+ ++K+    GGR           
Sbjct: 120 AKETMQKAGVPTVPGSDGLVETETQGLAIAHQIGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S    I       G        G  G     VY+E   +  R +   +L D
Sbjct: 168 ---GMRLVRSEDEFIKLFHAAQGE--AGAAFGNAG-----VYIEKFIERPRHIEFQILAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     +D  L              +   G   
Sbjct: 218 NYGN---VIHLGERDCSIQRRNQKLLEEAPSPALDEDLREKMGHAAVKAAQFINYTGAGT 274

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGR-------LRVLDSKISFDDNALYRHL 237
           I+        +  F + +  +   +P+  M  G              ++ FD + +    
Sbjct: 275 IEFLLDKSGHFY-FMEMNTRIQVEHPVTEMVTGVDLLVEQIRIAQGERLKFDQDKVTLQG 333

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGC 271
              E R  +E+   +       +S     G  G 
Sbjct: 334 HAIECRINAEDPDHDFRPSPGKISGYLPPGGPGV 367


>gi|206900277|ref|YP_002251130.1| phosphoribosylamine--glycine ligase [Dictyoglomus thermophilum
           H-6-12]
 gi|206739380|gb|ACI18438.1| phosphoribosylamine--glycine ligase [Dictyoglomus thermophilum
           H-6-12]
          Length = 413

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++++  +P A   +    +     +K    P  V+K+   A G+             
Sbjct: 106 AKEVMKRAGIPTADFRIFDDFNDVREFLKKERYP-LVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV + +S    +    ++L   ++    G  G +V
Sbjct: 152 -GVFIVNSEGEGLDIANKLLNEGIL----GEAGKKV 182


>gi|220926367|ref|YP_002501669.1| phosphoribosylamine/glycine ligase [Methylobacterium nodulans ORS
           2060]
 gi|219950974|gb|ACL61366.1| phosphoribosylamine/glycine ligase [Methylobacterium nodulans ORS
           2060]
          Length = 423

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 15/79 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++ +P   G    S      A     G   VVK+   A G+              
Sbjct: 113 KELCAEFGIPT-AGFARFSAAEPALAYLRARGAPIVVKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREIL 87
           GV V  +L    + +  +L
Sbjct: 158 GVVVAETLPEAEAAVASLL 176


>gi|160875481|ref|YP_001554797.1| CoA-binding domain-containing protein [Shewanella baltica OS195]
 gi|160861003|gb|ABX49537.1| CoA-binding domain protein [Shewanella baltica OS195]
 gi|315267668|gb|ADT94521.1| CoA-binding domain protein [Shewanella baltica OS678]
          Length = 901

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLYG 290
           A +R   +  + D+ E  +        N     L G  +G + NG G A+  +D + + G
Sbjct: 270 AAFRRAGMLRVNDLIELFAAVESLAHSN----PLQGERLGIISNGGGPAVLAVDELIMRG 325

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G  A                     N +D+ G A+  + A A  I+   + +  IL+
Sbjct: 326 GKLAELSDDTIAKLEAVLPNTWSRQNPIDIIGDANASRYAKALTILMDSNELDAILV 382


>gi|73980656|ref|XP_540124.2| PREDICTED: similar to carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase [Canis familiaris]
          Length = 2288

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     SS+  A++A + L  P+ V  +    G
Sbjct: 568 MAEIGEHVAPSEAASSLEQAQAAAERLGYPVLVRAAFALGG 608


>gi|15673345|ref|NP_267519.1| carbamoyl phosphate synthase large subunit [Lactococcus lactis
           subsp. lactis Il1403]
 gi|22095527|sp|Q9CFV2|CARB_LACLA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|12724347|gb|AAK05461.1|AE006368_5 carbamoylphosphate synthetase [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 1064

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +   P+    + ++V  A      +  P+ V  +                  + G
Sbjct: 133 KELCERIGEPLCASDIATTVDEAVEIADKIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +   +             G   S V    +E+     +E+   ++ D   
Sbjct: 180 GI--CDTEEELREIVAN-----------GLKLSPVTQCLIEESIAGYKEIEYEVMRDSAD 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 NAIVV 231


>gi|113475173|ref|YP_721234.1| phosphoribosylamine--glycine ligase [Trichodesmium erythraeum
           IMS101]
 gi|110166221|gb|ABG50761.1| phosphoribosylamine--glycine ligase [Trichodesmium erythraeum
           IMS101]
          Length = 423

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 26/134 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + + N+P AK    +   AA+  I  +P    V+K+   A G+             
Sbjct: 108 AKQFMAEANIPTAKSATFTRAEAAKEYITEIP---IVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++++   + I  I       K           V +E+     +E+ +  L D  
Sbjct: 152 -GVTVATTIEMAHNAIDRIFQGEFDKKN--------QSVVIEEFLT-GQEISVLALTDGL 201

Query: 128 SGMVAFIASTQGGM 141
           +      A     +
Sbjct: 202 TIRPLLPAQDHKAV 215


>gi|310764915|gb|ADP09865.1| conserved uncharacterized protein YfiQ [Erwinia sp. Ejp617]
          Length = 889

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 10/101 (9%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q + +L+ Y +      + S    A      +  P+ +         + +       ++
Sbjct: 484 HQVQPILQAYGLNTLPTWIASDSVQAVKIAAQIGYPVAL---------KLRSPDIPYKSE 534

Query: 66  SKGGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNC 105
            +G +    +   V   +  I+G   +   Q    G  V  
Sbjct: 535 VQGVMLYLRTADEVRQAVGAIIGRVSVAWPQARIDGLLVQS 575


>gi|294778066|ref|ZP_06743500.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Bacteroides
           vulgatus PC510]
 gi|294448124|gb|EFG16690.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Bacteroides
           vulgatus PC510]
          Length = 503

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 36/197 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + S   A      +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSAEEAVRICNEIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V+        +T  ++     G   + VY+E   +    +   +L D    ++  
Sbjct: 172 HSEDEVVEAY-----NTARSESMSSFGD--DTVYLEKFVEDPHHIEFQILGDNHGNVI-- 222

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI-DGGDLFP 192
                   D E   +   QKI +    P   +T E    + +      +A    G     
Sbjct: 223 -----HLFDRECSVQRRNQKIVEESPSPF--LTPELRQEMGEKAVAAARAVNYSGAGTIE 275

Query: 193 NLYKAFCDKDMSLLEIN 209
            L     +++   LE+N
Sbjct: 276 FLVD--KNRNFYFLEMN 290


>gi|213966146|ref|ZP_03394333.1| carbamoyl-phosphate synthase, large subunit [Corynebacterium
           amycolatum SK46]
 gi|213951244|gb|EEB62639.1| carbamoyl-phosphate synthase, large subunit [Corynebacterium
           amycolatum SK46]
          Length = 1119

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  +    +S   A      +  P+ V  S +  GGRG
Sbjct: 696 KVLAEAKLPAPEFGTATSFEEARQVAAGIGYPVLVRPSYVL-GGRG 740


>gi|78777664|ref|YP_393979.1| carbamoyl phosphate synthase large subunit [Sulfurimonas
           denitrificans DSM 1251]
 gi|78498204|gb|ABB44744.1| carbamoyl-phosphate synthase large subunit [Sulfurimonas
           denitrificans DSM 1251]
          Length = 1085

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 64/206 (31%), Gaps = 52/206 (25%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
             + +      +  +   A      L  P+ V  S +  G                G+R+
Sbjct: 681 NSHGLKQPANGLARTKDEAHDIALRLGFPVLVRPSYVLGG---------------RGMRI 725

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
             S + +      +  + L++            V V+   D   EL +  + D       
Sbjct: 726 VYSQEELRQY---MDLAVLVSNDAP--------VLVDKFLDQAIELDVDAICDGVD---V 771

Query: 133 FIASTQGGMDIEEVAKDY--------PQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           +I S      IEE             P  + K LID +         ++   L ++G   
Sbjct: 772 YIGSVM--QHIEEAGIHSGDSACSLPPVSLSKELIDQVE----AQTKTIALGLGVRGLMN 825

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINP 210
           +         Y  + D ++ L+E+NP
Sbjct: 826 VQ--------YAIYQD-EIYLIEVNP 842


>gi|89894788|ref|YP_518275.1| hypothetical protein DSY2042 [Desulfitobacterium hafniense Y51]
 gi|89334236|dbj|BAE83831.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 1079

 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 18/105 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL +  +P ++G   +SV  A +  + L  P+ V  S +  GGR               
Sbjct: 672 QLLLELGIPQSEGCAATSVSQARTIAEELGFPVLVRPSYV-IGGR--------------A 716

Query: 70  VRVESSLKSVISDIREIL---GSTLITKQTGPTGSRVNCVYVEDG 111
           ++V  +   + S + + +       I       G  V    V DG
Sbjct: 717 MQVVENFAELESYLTQAITLSPEHPILVDRYLEGKEVEVDAVADG 761


>gi|289649916|ref|ZP_06481259.1| hypothetical protein Psyrpa2_19529 [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 365

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 23/121 (19%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ SV +A +A + +  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSVESAIAAARDIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 T 127
            
Sbjct: 217 Q 217


>gi|257087002|ref|ZP_05581363.1| carbamoyl-phosphate synthase [Enterococcus faecalis D6]
 gi|256995032|gb|EEU82334.1| carbamoyl-phosphate synthase [Enterococcus faecalis D6]
          Length = 1060

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 133 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 178 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 208



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LQELAIPQPPGDTATSAEEAIVIADRIGYPVLVRPSYVLGG 714


>gi|224539728|ref|ZP_03680267.1| hypothetical protein BACCELL_04637 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518651|gb|EEF87756.1| hypothetical protein BACCELL_04637 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 388

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 29/147 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     ++   ++A + +  P  VVK  + + G+G+             V+    
Sbjct: 115 GLKTAKYFYAKTLDELKAASEKIGFPC-VVKPLMSSSGKGQSL-----------VKSADE 162

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           L+                   G  G  +  + +E+      E  ++LL            
Sbjct: 163 LEHAWEY-----------GCNGSRGD-IKELIIEEFIKFDSE--ITLLTVTQKNGPTLFC 208

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPL 162
              G +   +   DY +      IDP 
Sbjct: 209 PPIGHV---QKGGDYRESFQPAHIDPA 232


>gi|110597029|ref|ZP_01385318.1| Carbamoyl-phosphate synthase L chain,
           ATP-binding:Carbamoyl-phosphate synthetase large chain,
           oligomerisation:Carbamoyl-phosphate synthetase large
           chain-like:MGS-like [Chlorobium ferrooxidans DSM 13031]
 gi|110341220|gb|EAT59685.1| Carbamoyl-phosphate synthase L chain,
           ATP-binding:Carbamoyl-phosphate synthetase large chain,
           oligomerisation:Carbamoyl-phosphate synthetase large
           chain-like:MGS-like [Chlorobium ferrooxidans DSM 13031]
          Length = 618

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 42/204 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL +  +P  +     S   A+   + +  P  V  S +  G                 
Sbjct: 214 ALLEELEIPHPEYGTAISFEEAKEITRRIGYPALVRPSYVLGG---------------RA 258

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  +  S+   I + L  T    +  P       + ++   +   E  +  + D +  
Sbjct: 259 MKIVYNDDSLKEYIDQALFIT----EKYP-------LLIDRFLETAVEFDIDAIADSSDC 307

Query: 130 MVAFIASTQGGMDIEEVAKDYP---QKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           +++ I        I             I    I+ + G T     +L   L++ G   I 
Sbjct: 308 VISGIMQHVEAAGIHSGDSTSILPYHNISPKAIETMKGYT----RTLAKNLKVVGLMNIQ 363

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                 ++Y         ++E+NP
Sbjct: 364 YAVQNESVY---------VIEVNP 378


>gi|312873764|ref|ZP_07733809.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LEAF 2052A-d]
 gi|311090762|gb|EFQ49161.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LEAF 2052A-d]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|257869385|ref|ZP_05649038.1| carbamoyl-phosphate synthase [Enterococcus gallinarum EG2]
 gi|257803549|gb|EEV32371.1| carbamoyl-phosphate synthase [Enterococcus gallinarum EG2]
          Length = 1060

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ + N P+ +  ++S+V  A +    +  P+ V
Sbjct: 133 KQLMEELNQPIPESEIVSTVEEAVTFATKIGYPIIV 168



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L    +P   G   ++   A +    +  P+ V  S +  G
Sbjct: 668 DLFE-QALQALA---IPQPPGDTATNTTEAVAIANRIGYPVLVRPSYVLGG 714


>gi|217973269|ref|YP_002358020.1| CoA-binding domain-containing protein [Shewanella baltica OS223]
 gi|217498404|gb|ACK46597.1| CoA-binding domain protein [Shewanella baltica OS223]
          Length = 901

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLYG 290
           A +R   +  + D+ E  +        N     L G  +G + NG G A+  +D + + G
Sbjct: 270 AAFRRAGMLRVNDLIELFAAVESLAHSN----PLQGERLGIISNGGGPAVLAVDELIMRG 325

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G  A                     N +D+ G A+  + A A  I+   + +  IL+
Sbjct: 326 GKLAELSDDTIAKLEAVLPNTWSRQNPIDIIGDANASRYAKALTILMDSNELDAILV 382


>gi|111020602|ref|YP_703574.1| succinate--CoA ligase (ADP-forming) [Rhodococcus jostii RHA1]
 gi|110820132|gb|ABG95416.1| probable succinate--CoA ligase (ADP-forming) [Rhodococcus jostii
           RHA1]
          Length = 690

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
            A+ L R   V      ++ +   A +A  T+  P+ V+K+
Sbjct: 484 DARELFRTAGVEFPDAQLVRTCAEAVAAADTVGYPV-VLKA 523


>gi|148656811|ref|YP_001277016.1| phosphoribosylamine--glycine ligase [Roseiflexus sp. RS-1]
 gi|148568921|gb|ABQ91066.1| phosphoribosylamine--glycine ligase [Roseiflexus sp. RS-1]
          Length = 418

 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 3/109 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+    +P A+  +     AA   +++  G ++VVK+   A G+G    + +     
Sbjct: 106 AKRLMIDARIPTAEARIFDDPDAAVEFVRS-SGRVWVVKADGLAAGKGVIVPETVSETVD 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
               + ++       + E L    ++      G R   + +    D  R
Sbjct: 165 AIRLLGATRAGARLLLEERLSGPEVSLIALCDGERALPLILAQ--DHKR 211


>gi|309806001|ref|ZP_07700027.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 03V1-b]
 gi|308167604|gb|EFO69757.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 03V1-b]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|153000772|ref|YP_001366453.1| CoA-binding domain-containing protein [Shewanella baltica OS185]
 gi|151365390|gb|ABS08390.1| CoA-binding domain protein [Shewanella baltica OS185]
          Length = 901

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDG-NIGCMVNGAGLAMATMDIIKLYG 290
           A +R   +  + D+ E  +        N     L G  +G + NG G A+  +D + + G
Sbjct: 270 AAFRRAGMLRVNDLIELFAAVESLAHSN----PLQGERLGIISNGGGPAVLAVDELIMRG 325

Query: 291 GAPA---------------------NFLDVGGGADQDKVAAAFKIITSDSSVKGILI 326
           G  A                     N +D+ G A+  + A A  I+   + +  IL+
Sbjct: 326 GKLAELSDDTIAKLEAVLPNTWSRQNPIDIIGDANASRYAKALTILMDSNELDAILV 382


>gi|325913772|ref|ZP_08176133.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           UPII 60-B]
 gi|325476972|gb|EGC80123.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           UPII 60-B]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|315027872|gb|EFT39804.1| carbamoyl-phosphate synthase, large subunit [Enterococcus faecalis
           TX2137]
          Length = 1066

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +   P+ +  ++++V  A +  K +  P+ V  +    G                
Sbjct: 139 KQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGG---------------T 183

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G  +  + + +       L  + +T+     
Sbjct: 184 GGGMCDTEEELRQIAENGLKLSPVTQCLIEK 214



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P   G   +S   A      +  P+ V  S +  G
Sbjct: 674 DLFE-QA---LQELAIPQPPGDTATSAEEAIVIADRIGYPVLVRPSYVLGG 720


>gi|309789560|ref|ZP_07684141.1| acetyl-CoA carboxylase, biotin carboxylase [Oscillochloris
           trichoides DG6]
 gi|308228296|gb|EFO81943.1| acetyl-CoA carboxylase, biotin carboxylase [Oscillochloris
           trichoides DG6]
          Length = 457

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 11/111 (9%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
            +  +R   VP+  G    + SV  A    + +  P+  +K     GGRG      +  D
Sbjct: 119 GRQTMRAAGVPIIPGSEGELQSVEEAVDLARQIGYPVL-LKPSAGGGGRGM----RVAND 173

Query: 66  SKGGVRVESSLKSVISDIREILGS-TLITKQTGPTGSRVNCVYVEDGADIL 115
               +R  S+     ++     G   LI ++  P    V    + D     
Sbjct: 174 ESELIRAFST---ARAEAEGAFGRGDLILEKYLPKVRHVEIQVLADAYGHA 221


>gi|311744576|ref|ZP_07718376.1| phosphoribosylamine-glycine ligase [Aeromicrobium marinum DSM
           15272]
 gi|311312195|gb|EFQ82112.1| phosphoribosylamine-glycine ligase [Aeromicrobium marinum DSM
           15272]
          Length = 419

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 15/92 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V  +     +A+ +   P YVVK    A G+             
Sbjct: 106 AKQVMAAAEVPTAMAHVCDTAEQVAAALDSFGAP-YVVKDDALAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPT 99
            GV V    +  I          +     GP 
Sbjct: 152 -GVVVTDDRQEAIDHAASCGRVVIEEFLDGPE 182


>gi|269926076|ref|YP_003322699.1| phosphoribosylamine/glycine ligase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789736|gb|ACZ41877.1| phosphoribosylamine/glycine ligase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 430

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 64/229 (27%), Gaps = 44/229 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++R   VP A+    S      S I +L      VK+   A G+             
Sbjct: 111 AKQVMRLAGVPTAEYREFSDPWEIRSYISSLG-RRVAVKADGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +           L S              + V VE+          +L+    
Sbjct: 157 -GVLVTDNPVEAAEFAELYLSS------------PGSKVIVEEALSGKELSLFALV---- 199

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-------IGVTSEDVASLCDMLELQ 180
           +G +    S              P       I P          +T E +  +   ++  
Sbjct: 200 NGDMVVPFSHAQDYKPAYDGDKGPNTGGMGAICPADSPSALTEELTEEIITPVARQMKTM 259

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           G      G +F  L     +    +LE N        ++ +   ++  D
Sbjct: 260 GVPF--CGVIFAGL--MLTEDGPYVLEFNARFGDPEAQVMI--PRLDAD 302


>gi|198282925|ref|YP_002219246.1| carbamoyl-phosphate synthase large subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218666972|ref|YP_002425128.1| carbamoyl-phosphate synthase, large subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247446|gb|ACH83039.1| carbamoyl-phosphate synthase, large subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218519185|gb|ACK79771.1| carbamoyl-phosphate synthase, large subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 1079

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 43/168 (25%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + VA+      +  A    + +  P+ +         R              
Sbjct: 133 KKAMEEIGLEVARSAFGHDMEGARQIAEDIGFPVII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +                   G   S  + + +E+     +E  + ++ DR  
Sbjct: 181 ---IAYNREEFEDIAAR-----------GLEASPTHEILIEESIIGWKEFEMEVVRDRAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P   +T  +   + D 
Sbjct: 227 NCIIV-------CSIENFDPMGIHTGDSITVAPAQTLTDREYQRMRDA 267


>gi|163790401|ref|ZP_02184832.1| carbamoyl-phosphate synthase large subunit [Carnobacterium sp. AT7]
 gi|159874305|gb|EDP68378.1| carbamoyl-phosphate synthase large subunit [Carnobacterium sp. AT7]
          Length = 1059

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ++ E QA   L + NVP   G   ++   A      +  P+ V  S +  GGRG
Sbjct: 668 DLFE-QA---LNELNVPQPLGDTATTAEEAVVIADRINYPVLVRPSYVL-GGRG 716


>gi|195953562|ref|YP_002121852.1| phosphoribosylamine/glycine ligase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933174|gb|ACG57874.1| phosphoribosylamine/glycine ligase [Hydrogenobaculum sp. Y04AAS1]
          Length = 417

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 22/113 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+ + KY +P A     +    A + I+ +  P  V+K+   A G+             
Sbjct: 105 AKSFMSKYEIPTANYGSFTDPKKALNFIEDIGYP-AVIKADGLASGK------------- 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
            GV + SS +       ++L   +I  + G +G     V +E+        Y+
Sbjct: 151 -GVVIVSSRQE----ASQVLEDFMIKNKLGESGK---KVVIEEFLRGEEASYI 195


>gi|73542208|ref|YP_296728.1| phosphoribosylamine--glycine ligase [Ralstonia eutropha JMP134]
 gi|72119621|gb|AAZ61884.1| phosphoribosylamine--glycine ligase [Ralstonia eutropha JMP134]
          Length = 422

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 60/293 (20%), Positives = 102/293 (34%), Gaps = 40/293 (13%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P A     S    A + I     P+ V+K+   A G+             
Sbjct: 106 AKAFMHRHGIPTAAYQTFSDAAQAHAYIDAQGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+   S +       L   + G  G+RV    VE+  +   E    +LVD  
Sbjct: 152 -GVVVAMSLEEAHSAVD----MMLADNKLGDAGARV---VVEEFLE-GEEASFIVLVDGK 202

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCD-MLELQGQARI 185
           +  V  +A++Q    + +     P         P   VT      +L + ++        
Sbjct: 203 N--VLALATSQDHKRLLDADAG-PNTGGMGAYSPAPVVTPALHARALREIIMPTVRGMEK 259

Query: 186 DGGDLFPNLYK-AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD-----DNALYRHLDI 239
           DG      LY     DKD +L  +     M +   + + +++  D     D A+   LD 
Sbjct: 260 DGIPYTGFLYAGLMIDKDGNLKTLEFNCRMGDPETQPIMARLKTDLVDVMDAAVSGKLDE 319

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGA 292
            EL D     +  +    +        G+        G+   T D +  + G 
Sbjct: 320 VEL-DWDRRTALGVVMAAYGYPDAPRKGD-----AITGIPAETDDSVTFHAGT 366


>gi|300857913|ref|YP_003782896.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Corynebacterium pseudotuberculosis FRC41]
 gi|300685367|gb|ADK28289.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Corynebacterium pseudotuberculosis FRC41]
 gi|302205639|gb|ADL09981.1| Phosphoribosyl amino imidazole carboxylase ATPase subunit
           [Corynebacterium pseudotuberculosis C231]
 gi|308275874|gb|ADO25773.1| Phosphoribosyl amino imidazole carboxylase ATPase subunit
           [Corynebacterium pseudotuberculosis I19]
          Length = 401

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 44/182 (24%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++   PV     I+SV  A +  +++ G + V K+                     GV 
Sbjct: 122 LKEMGAPVPPFAPITSVEDARAFWESVDGQVCV-KA-------------RRGGYDGHGVW 167

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              S   +   + ++L            G+    +  E    ++RE  LS +V RT    
Sbjct: 168 FPDSAMELEELVDKLL----------SAGTP---LMGEKKVQLVRE--LSAMVARTPSG- 211

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE---DVA----SLCDMLELQGQAR 184
                         V       I    + P  G+  E           +   L + G   
Sbjct: 212 -------EAQSWPVVESVQTDGICTEAVAPAPGLGEELEHQCRELSIRIATELGVTGALA 264

Query: 185 ID 186
           ++
Sbjct: 265 VE 266


>gi|295675992|ref|YP_003604516.1| phosphoribosylamine/glycine ligase [Burkholderia sp. CCGE1002]
 gi|295435835|gb|ADG15005.1| phosphoribosylamine/glycine ligase [Burkholderia sp. CCGE1002]
          Length = 427

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+    + V AA  A     G   V+K+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYETFADV-AAAHAYLDAKGAPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+   + +       L   + G  G+RV    +E+      E    ++VD  
Sbjct: 152 -GVVVAQTLEEAHAAVD----MMLSDNKLGDAGARV---VIEEFL-AGEEASFIVMVDGK 202

Query: 128 SGMVAFIASTQG 139
              V  +AS+Q 
Sbjct: 203 H--VLALASSQD 212


>gi|256828136|ref|YP_003156864.1| Pyruvate carboxylase [Desulfomicrobium baculatum DSM 4028]
 gi|256577312|gb|ACU88448.1| Pyruvate carboxylase [Desulfomicrobium baculatum DSM 4028]
          Length = 476

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 25/175 (14%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTL---PGPLYVVKSQIHAGGRGKGRFKELP 63
           K L RK  VP   G    ++    AE   K+L        V K  I          K   
Sbjct: 129 KRLARKLGVPTVPGSDKPVTDDLEAEHIAKSLFDFQKEQGVAKPVILV--------KASA 180

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
                G+     L    S +R I   +   +Q    G     V +E        L + ++
Sbjct: 181 GGGGMGIEEVEDLDKFRSVLRRI--KSYSKRQFRDEG-----VLIEQRIFDFNHLEVQVV 233

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTSEDVASLCDML 177
            DRT           G  +    +  + ++I      DP     + D   + + +
Sbjct: 234 SDRTGQNPV----HFGTRNCSVQSPGHQKRIEVAPGFDPSSLRYAFDAKKVLEDI 284


>gi|170781869|ref|YP_001710201.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189083527|sp|B0RAP7|SYR_CLAMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|169156437|emb|CAQ01585.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 554

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 60/195 (30%), Gaps = 21/195 (10%)

Query: 31  AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGST 90
           A    K L     V K  +   G      +   A +     VES          E +   
Sbjct: 67  AADIAKALGELPQVAKVDVAGPGFINITLEAAAAGALAHTIVESGPAYGRGHSLEGIRIN 126

Query: 91  LITKQTGPTGSRVN--------------CVYVEDGADILRELYL---SLLVDRTSGMVAF 133
           L      PTG  ++               +   +GAD+ RE Y       +DR +     
Sbjct: 127 LEFVSANPTG-PIHLGGVRWAAVGDSLARILQAEGADVTREYYFNDHGSQIDRFARS--L 183

Query: 134 IASTQGGMDIEE-VAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFP 192
           +AS  G    E+     Y  +I + +++   G            +  +    +  G++  
Sbjct: 184 LASHLGEETPEDGYGGAYIGEIAERVVEGYEGDIDALTREAQQEVFRKSGTELMFGEIKQ 243

Query: 193 NLYKAFCDKDMSLLE 207
            L+    D D+   E
Sbjct: 244 KLHDFGVDFDVFFHE 258


>gi|84685007|ref|ZP_01012906.1| acetyltransferase, GNAT family protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84666739|gb|EAQ13210.1| acetyltransferase, GNAT family protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 893

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 32/232 (13%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           ++KALL+ + +P+   V   +   A  A  ++  P+ +  S      +            
Sbjct: 495 ESKALLKAFRIPINLTVEAETAAEALVAASSVGFPVAMKISSPDITHKSDVGGVRTGIGD 554

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLV 124
              V+     + +   ++                +R+  + VE  +DI   REL + +  
Sbjct: 555 AAEVKRVF--RDIQERVKR-----------ERPNARIRGITVEAMSDIEAPRELVIGVSR 601

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE------DVASLCDMLE 178
           D   G      +  GG  +E +          + + PL  V +E       ++ L +   
Sbjct: 602 DPVFGPTILFGA--GGTAVEVMKDSA------VALPPLNAVLAERLIARTRISRLLEAYR 653

Query: 179 LQGQARIDGGDLFPNLYKAFCDKDMSLLE--INPLIIMKNGRLRVLDSKISF 228
            +  A  D              +   ++E  INPLI   NG +  +D++I  
Sbjct: 654 DKPAADHDAVVFVLRRISMMVSELPEIVELDINPLIAGANG-VLAVDARIRV 704



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCDVLVKGILSAVKEVKIN 352
           AN +D+ G A   +  AA K +  D +  G+LI      +       + ++ A+ + +  
Sbjct: 349 ANPVDILGDAGAHEYGAAVKAVYDDPNTDGLLIMLTPQAMTDATAAAQAVVDALPKRRKK 408

Query: 353 IPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
             L   +  A+V  G +L++E+G+    +       ++ V A
Sbjct: 409 PVLACWMGEASVGEGRKLLSENGVADFISP------ERAVEA 444


>gi|23015506|ref|ZP_00055280.1| COG0151: Phosphoribosylamine-glycine ligase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 429

 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  K  +P A     +++  A+  I+    P+ VVK+   A G+              
Sbjct: 112 KDVAAKAGIPTAWYGRFTNMEKAKDFIRQKGAPI-VVKTDGLAAGK-------------- 156

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+  +S +  ++G  +     G  G   N + +E+  D   E     L D ++
Sbjct: 157 GVVVAMTLEEALSAVDMMMGERVF----GDAG---NELVIEEFLD-GEECSFFALCDGST 208

Query: 129 GMVAFIA 135
            +    A
Sbjct: 209 ALPLVAA 215


>gi|329919624|ref|ZP_08276613.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           SPIN 1401G]
 gi|328937429|gb|EGG33851.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           SPIN 1401G]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|309809683|ref|ZP_07703539.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           SPIN 2503V10-D]
 gi|308170043|gb|EFO72080.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           SPIN 2503V10-D]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|309805595|ref|ZP_07699638.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 09V1-c]
 gi|308165096|gb|EFO67336.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 09V1-c]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|302190954|ref|ZP_07267208.1| carbamoyl phosphate synthase large subunit [Lactobacillus iners
           AB-1]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|281491906|ref|YP_003353886.1| carbamoyl-phosphate synthase, large chain [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375615|gb|ADA65119.1| Carbamoyl-phosphate synthase, large chain [Lactococcus lactis
           subsp. lactis KF147]
          Length = 1064

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +   P+    + ++V  A      +  P+ V  +                  + G
Sbjct: 133 KELCERIGEPLCASDIATTVDEAVEIADKIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +   +             G   S V    +E+     +E+   ++ D   
Sbjct: 180 GI--CDTEEELREIVAN-----------GLKLSPVTQCLIEESIAGYKEIEYEVMRDSAD 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 NAIVV 231


>gi|242309963|ref|ZP_04809118.1| biotin carboxylase [Helicobacter pullorum MIT 98-5489]
 gi|239523260|gb|EEQ63126.1| biotin carboxylase [Helicobacter pullorum MIT 98-5489]
          Length = 454

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           AK +++   VPV  G    I S   A    K +  P+
Sbjct: 123 AKEVMKNAGVPVIPGSDGAIKSKEEALKLAKEIGYPV 159


>gi|222085639|ref|YP_002544169.1| acetyl-CoA carboxylase, biotin carboxylase [Agrobacterium
           radiobacter K84]
 gi|221723087|gb|ACM26243.1| acetyl-CoA carboxylase, biotin carboxylase [Agrobacterium
           radiobacter K84]
          Length = 450

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            +PV  G    + +   A    K +  P+ + K+    GGRG        A ++  V   
Sbjct: 129 GIPVVPGSDGEVKTEEEALKTAKEIGYPVLI-KATAGGGGRGM-----KVARTEADVLEA 182

Query: 74  SSLKSVISDIR 84
            S     +   
Sbjct: 183 WSTARTEAAAA 193


>gi|111221117|ref|YP_711911.1| acetyl-/propionyl-coenzyme A carboxylase subunit alpha [Frankia
           alni ACN14a]
 gi|111148649|emb|CAJ60323.1| Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Includes:
           Biotin carboxylase; Biotin carboxyl carrier protein
           (BCCP)] [Frankia alni ACN14a]
          Length = 700

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAES-----AIKTLPGPLYVVKSQIHAGGRG 55
           AK L+    VPV  G+V+     A       A +       +VK+    GGRG
Sbjct: 139 AKELMAAAGVPVLPGLVVDEALLAGRDGGTVAAEAGLTFPLLVKAVFGGGGRG 191


>gi|21244794|ref|NP_644376.1| hypothetical protein XAC4077 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110493|gb|AAM38912.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 902

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +P+    V ++ + A      L      V  ++ +            +D  G 
Sbjct: 497 RLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSE------IAHKSDVDGV 550

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDRT 127
               SS+ +V      IL        T      +  V V+        REL   +  D  
Sbjct: 551 RLNLSSVAAVREAATGILARARAAHPTAA----IEGVIVQPTVLRPKARELIAGIADDPV 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-----PLIGVTSEDVASLCDMLELQGQ 182
            G        +GG  +E +     +++    +D      LIG T      L    ++   
Sbjct: 607 FGPAIVFG--RGGTAVEVIND---RELALPPLDLRLAHELIGRT-RVSRILKAYRDVPAA 660

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  +   L +   D  +++ L+INPL+  ++G +  LD++++ 
Sbjct: 661 DERAVALVLVKLAQLAADIPEITELDINPLLADRDG-VIALDARVAV 706


>gi|34557962|ref|NP_907777.1| phosphoribosylglycinamide formyltransferase 2 [Wolinella
           succinogenes DSM 1740]
 gi|81653439|sp|Q7M8I0|PURT_WOLSU RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|34483680|emb|CAE10677.1| PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE-FORMATE DEPENDENT
           [Wolinella succinogenes]
          Length = 387

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 25/108 (23%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +  V  ++   + ++    SA + +  P  V+K  + + G G+              R+
Sbjct: 122 EEVGVKTSQYRFVKTLDELRSAAEEIGYPC-VIKPVMSSSGHGQSVC-----------RM 169

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +++   + +E  G +             + + VE+      E+ L
Sbjct: 170 AEEIEACFEEAKEARGDS-------------SELIVEEFIPFDYEITL 204


>gi|145220187|ref|YP_001130896.1| carbamoyl-phosphate synthase large subunit [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206351|gb|ABP37394.1| carbamoyl-phosphate synthase large subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 619

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 36/201 (17%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL + N+P        S+  A      +  P+ V  S +  G                 
Sbjct: 214 ALLDRLNIPHPDYGTAVSLEEARDITTRIGYPVLVRPSYVLGG---------------RA 258

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  S  S+   + + L  T    +  P       + ++   +   E  +  L D T  
Sbjct: 259 MKIIYSDDSLKEYVDQALFIT----EKYP-------LLIDRFLETAVEFDIDALADTTDC 307

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
           +++ I        I               I P   ++ E +A++ +   +  +     G 
Sbjct: 308 VISGIMQHVEAAGIHSGDSTS--------ILPYHNISPEVIATMKEYTRIMAENLKVVG- 358

Query: 190 LFPNLYKAFCDKDMSLLEINP 210
              N+  A  +  + ++E+NP
Sbjct: 359 -LMNVQYAVQNNSVYVIEVNP 378


>gi|329956548|ref|ZP_08297145.1| CoA binding domain protein [Bacteroides clarus YIT 12056]
 gi|328524445|gb|EGF51515.1| CoA binding domain protein [Bacteroides clarus YIT 12056]
          Length = 687

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 70/224 (31%), Gaps = 28/224 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL    +PV +  V ++   A +  +    P+             K       +D  G 
Sbjct: 490 ALLHSAGIPVVEEFVSANKEEALAFARRAGFPVV-----------AKVVGPVHKSDVGGV 538

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           V    S + +  +   ++               V  + V+       EL++    +   G
Sbjct: 539 VLNIKSEQHLALEFERMMQIP-----------EVTGIMVQPMLK-GTELFIGAKYEEKFG 586

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGG 188
            V       GG+ +E +             +    + S     +       +G       
Sbjct: 587 HVVL--CGLGGIFVEVLKDVSSGLAPLSYEEAYSMIRSLRAYKIIKGTRGQKGVNEDKFA 644

Query: 189 DLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L        ++  ++INPL+  +   +  +D++I  + N
Sbjct: 645 EIIVRLSTLLRFATEIKEMDINPLLATE-KYVIAVDARIRIEKN 687


>gi|325911955|ref|ZP_08174358.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           UPII 143-D]
 gi|325476257|gb|EGC79420.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           UPII 143-D]
          Length = 1055

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|320355375|ref|YP_004196714.1| carbamoyl-phosphate synthase large subunit [Desulfobulbus
           propionicus DSM 2032]
 gi|320123877|gb|ADW19423.1| carbamoyl-phosphate synthase large subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 1068

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/175 (10%), Positives = 51/175 (29%), Gaps = 28/175 (16%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            + + +   + SV  AE     L  P+ +               +        G  +  +
Sbjct: 140 GIEMPRSTAVYSVEDAERIAAELGYPVVI---------------RPAYTMGGTGGGMVYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV-AFI 134
           L+ + +               G   SR+  + VE+      EL L ++ D  + ++    
Sbjct: 185 LEELRTVATR-----------GIAASRIGQILVEECVIGWEELELEVVRDADNRLITVCF 233

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGD 189
                 M +          +  + ++    +      ++ + + + G   +    
Sbjct: 234 IENIDPMGVHTGDSFCAAPMLTVPVELQQRLQRA-AYAIVESIGVIGGTNVQFAH 287


>gi|190890598|ref|YP_001977140.1| phosphoribosylamine-glycine ligase [Rhizobium etli CIAT 652]
 gi|218517166|ref|ZP_03514006.1| phosphoribosylamine--glycine ligase [Rhizobium etli 8C-3]
 gi|190695877|gb|ACE89962.1| phosphoribosylamine-glycine ligase protein [Rhizobium etli CIAT
           652]
          Length = 423

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 23/120 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  +Y +P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDICARYGIPTGAYQRFNNAPKAKAYIRAQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   ++ + +           G  G+ V    VE   D     +  L   R +
Sbjct: 152 GVTVAMTLDEALAAVDDCF-----EGAFGAAGAEV---VVEAYLDGEEASFFCLCDGRHA 203


>gi|297583970|ref|YP_003699750.1| carbamoyl-phosphate synthase large subunit [Bacillus
           selenitireducens MLS10]
 gi|297142427|gb|ADH99184.1| carbamoyl-phosphate synthase, large subunit [Bacillus
           selenitireducens MLS10]
          Length = 1071

 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           N+ E  A+  L    +P+ +G    SV  A +  + +  P+ V  S +  G
Sbjct: 667 NLFE--AR--LHDIGLPMPEGKTAVSVPEAMAIAEDIGYPVLVRPSYVLGG 713



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           +AL+ +   PV +  ++ SV  A +  +++  PL V  +    G
Sbjct: 133 RALMNELGEPVPESEIVHSVEEARTFAESIGLPLIVRPAYTLGG 176


>gi|303325454|ref|ZP_07355897.1| putative L-lactate dehydrogenase [Desulfovibrio sp. 3_1_syn3]
 gi|302863370|gb|EFL86301.1| putative L-lactate dehydrogenase [Desulfovibrio sp. 3_1_syn3]
          Length = 409

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K + +   +P+     +        A++    P  V+K       RG      L  D   
Sbjct: 112 KDMFKARGIPIPWYAPVRDAQDVREALQKKACP-LVIKP---VDSRGARGVMRLTPDVDA 167

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCV 106
                ++     +  R ++ + L   Q    G  V+ V
Sbjct: 168 EWAFAAAQAESRT-ARVMIEAYLDGPQVSTEGLMVHGV 204


>gi|329736378|gb|EGG72647.1| K+-transporting ATPase, B subunit [Staphylococcus epidermidis
           VCU045]
          Length = 672

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 9/148 (6%)

Query: 243 RDVSEEDSREIE-AKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVG- 300
            D + E S  ++ A+   ++     G          ++ A  D  ++Y GAP N +    
Sbjct: 339 EDDTPEGSSIVKLARAQGINLPQRTGEYYPFTAETRMSGAKFDDYEVYKGAP-NSMIKRV 397

Query: 301 ---GGADQDKVAAAFKIITSDSSVKGILI---NIFGGIMRCDVLVKGILSAVKEVKINIP 354
              GG   + +      ++       ++I   NI G I   DV+ +G++   +E+++   
Sbjct: 398 KEAGGVIPEDLDECVTEVSRKGGTPLVVIEDNNILGVIYLKDVIKEGLVERFQELRVMGI 457

Query: 355 LVMRLEGANVDIGNRLIAESGLNVITAI 382
             +   G N      +  E+G++   A 
Sbjct: 458 ETVMCTGDNALTAATIAKEAGVDRFIAE 485


>gi|312872851|ref|ZP_07732913.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LEAF 2062A-h1]
 gi|311091585|gb|EFQ49967.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LEAF 2062A-h1]
          Length = 1055

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 168


>gi|302670200|ref|YP_003830160.1| carbamoyl-phosphate synthase large subunit CarB1 [Butyrivibrio
           proteoclasticus B316]
 gi|302394673|gb|ADL33578.1| carbamoyl-phosphate synthase large subunit CarB1 [Butyrivibrio
           proteoclasticus B316]
          Length = 1088

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 18/108 (16%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +  A+G  + +   A+     L  P+ V  S +  G                G
Sbjct: 695 QILEETQIKRAQGATVYTAEEAKEVANRLGYPVLVRPSYVLGG---------------QG 739

Query: 70  VRVESSLKSVISDIREILGS---TLITKQTGPTGSRVNCVYVEDGADI 114
           +++  S + +   +  I        I       G       V DG DI
Sbjct: 740 MQIALSDEEIEEFMNIINRYAQDHPILVDKYLQGVETEVDAVCDGEDI 787


>gi|238028184|ref|YP_002912415.1| phosphoribosylamine--glycine ligase [Burkholderia glumae BGR1]
 gi|237877378|gb|ACR29711.1| Hypothetical protein bglu_1g26360 [Burkholderia glumae BGR1]
          Length = 425

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+     +  AA  A     G   VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYE-TFTDAAAAHAYLDAKGAPIVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+     +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMSLEEAHEAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|254422083|ref|ZP_05035801.1| acetyl-CoA carboxylase, biotin carboxylase [Synechococcus sp. PCC
           7335]
 gi|196189572|gb|EDX84536.1| acetyl-CoA carboxylase, biotin carboxylase [Synechococcus sp. PCC
           7335]
          Length = 447

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 94/278 (33%), Gaps = 42/278 (15%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA ++K  VP   G   +++S   A      +  P+ ++K+    GGR           
Sbjct: 120 AKATMQKVKVPTVPGSEGLLNSQEEAAKLAAEIGYPV-IIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPT---GSRVNCVYVEDGADILRELYLSL 122
              G+R+  +           LG   +  Q       G+    VY+E   +  R +   +
Sbjct: 168 ---GMRLVRAPHE--------LGKMFLAAQGEAEASFGNP--GVYLEKFVENPRHIEFQI 214

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQG 181
           L D        +   +    I+   +   ++     +D  +            + +   G
Sbjct: 215 LADSYGN---VVHLGERDCSIQRRHQKLLEEAPSAALDESLRQQMGAAAVRAAESINYVG 271

Query: 182 QARIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDI 239
              ++   D     Y  F + +  +   +P+  M  G  L     +++  D  L+   DI
Sbjct: 272 AGTVEFLVDRTGEFY--FMEMNTRIQVEHPVTEMVTGIDLIAEQIRVAQGDRLLFTQADI 329

Query: 240 QELRDVSEEDSREIEAKQHNLSYIALDGNI-GCMVNGA 276
           Q LR  + E     E  +HN       G I G +  G 
Sbjct: 330 Q-LRGHAIECRINAEDPEHNFR--PNPGRISGYLAPGG 364


>gi|114650526|ref|XP_001148007.1| PREDICTED: propionyl-Coenzyme A carboxylase, alpha polypeptide
           isoform 1 [Pan troglodytes]
          Length = 615

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|88802014|ref|ZP_01117542.1| putative phosphoribosylamine--glycine ligase [Polaribacter irgensii
           23-P]
 gi|88782672|gb|EAR13849.1| putative phosphoribosylamine--glycine ligase [Polaribacter irgensii
           23-P]
          Length = 425

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 25/127 (19%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K  ++K+ VP A+    +  S+    + ++TL  P YV+K+   AGG+           
Sbjct: 110 SKQFMQKHGVPTARYQSFTKESLQDGIAFLETLEAP-YVLKADGLAGGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV + + L    +++ E++            G     V +E+      EL + +L D
Sbjct: 158 ---GVLILNDLAEAKTELEEMVSHEKF-------GKASTTVVIEEFLK-GIELSVFVLTD 206

Query: 126 RTSGMVA 132
             S  + 
Sbjct: 207 GKSYKIL 213


>gi|331270309|ref|YP_004396801.1| carbamoyl-phosphate synthase, large subunit [Clostridium botulinum
           BKT015925]
 gi|329126859|gb|AEB76804.1| carbamoyl-phosphate synthase, large subunit [Clostridium botulinum
           BKT015925]
          Length = 1063

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 37/202 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + LL   ++    G  ++ +  A   ++ L  P+ V  S +  GGR              
Sbjct: 671 RELLESLDIKTPTGRPVTCIKEAYKVVEKLGYPVIVRPSYV-IGGR-------------- 715

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            + V    K++   ++E +  +L T+ T      V    +E  A    E  L        
Sbjct: 716 AMEVIYDDKALEKYMKEAV--SLSTEHTIIVDKYVRGTEIEVDAICDGEDVL-------- 765

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
            M   +        IE         I    + P + +  + +  L D  +   +A    G
Sbjct: 766 -MPGIM------EHIERTGVHSGDSI---TVYPYMTLKEDVIDKLVDNTKKIAKALKIVG 815

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               N+   F  KD+ ++E+NP
Sbjct: 816 --LMNIQYVFDGKDIYVIEVNP 835


>gi|326390825|ref|ZP_08212377.1| D-alanine/D-alanine ligase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993084|gb|EGD51524.1| D-alanine/D-alanine ligase [Thermoanaerobacter ethanolicus JW 200]
          Length = 359

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 53/201 (26%), Gaps = 64/201 (31%)

Query: 9   KALLRKYNVPVAKGVVIS-----SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           K + ++  +P    VV+       + A +  ++ L  P +V               K   
Sbjct: 141 KRIFKEAGLPTPDFVVVYRKEIEDLEAIKKKVEHLGYPCFV---------------KPAN 185

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
             S  G+    + + +   ++                     + +E G D  RE+  S+L
Sbjct: 186 LGSSVGITKVHNEEELPGALK-------------LAAKYDRKLLIERGID-AREIECSVL 231

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            +                       + PQ      I P       +          L   
Sbjct: 232 GN-----------------------ENPQASIAGEIVPSNEFYDYNAKYFDGGKSLLLIP 268

Query: 177 LELQGQARIDGGDLFPNLYKA 197
             L  +   +   L    YKA
Sbjct: 269 APLPDEKMEEVRQLAIKAYKA 289


>gi|320458967|dbj|BAJ69588.1| phosphoribosylglycinamide formyltransferase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 476

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 189 GLPTTPYRFAGSLEELHAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 236

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 237 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 286

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 287 PIGQRQESGDYRESWQPATE 306


>gi|294664797|ref|ZP_06730121.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605428|gb|EFF48755.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 902

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +P+    V ++ + A      L      V  ++ +            +D  G 
Sbjct: 497 RLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSE------IAHKSDVDGV 550

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDRT 127
               SS+ +V      IL        T      +  V V+        REL   +  D  
Sbjct: 551 RLNLSSVAAVREAATGILARARAAHPTAA----IEGVIVQPTVLRPKARELIAGIADDPV 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-----PLIGVTSEDVASLCDMLELQGQ 182
            G        +GG  +E +     +++    +D      LIG T      L    ++   
Sbjct: 607 FGPAIVFG--RGGTAVEVIND---RELALPPLDLRLAHELIGRT-RVSRILKAYRDVPAA 660

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  +   L +   D  +++ L+INPL+  ++G +  LD++++ 
Sbjct: 661 DERAVALVLVKLAQLAADIPEITELDINPLLADRDG-VIALDARVAV 706


>gi|259501322|ref|ZP_05744224.1| carbamoyl-phosphate synthase [Lactobacillus iners DSM 13335]
 gi|259167292|gb|EEW51787.1| carbamoyl-phosphate synthase [Lactobacillus iners DSM 13335]
          Length = 1063

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 141 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 176


>gi|289579362|ref|YP_003477989.1| D-alanine/D-alanine ligase [Thermoanaerobacter italicus Ab9]
 gi|289529075|gb|ADD03427.1| D-alanine/D-alanine ligase [Thermoanaerobacter italicus Ab9]
          Length = 359

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 52/201 (25%), Gaps = 64/201 (31%)

Query: 9   KALLRKYNVPVAKGVVIS-----SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           K + ++  +P    VV+       +   +  I+ L  P +V               K   
Sbjct: 141 KRIFKEAGLPTPDFVVVYRKEIGDLETIKKKIEHLGYPCFV---------------KPAN 185

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
             S  G+    + + +   ++                     + +E G +  RE+  S+L
Sbjct: 186 LGSSVGITKVHNEEELPGALK-------------LAAKYDRKLLIEKGIE-AREIECSVL 231

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            +                       + P+      I P       +          L   
Sbjct: 232 GN-----------------------ENPEASVAGEIVPSNEFYDYNAKYFDGGKSLLLIP 268

Query: 177 LELQGQARIDGGDLFPNLYKA 197
             L  +   +   L    YKA
Sbjct: 269 APLPDEKMEEIRKLAIKAYKA 289


>gi|242053347|ref|XP_002455819.1| hypothetical protein SORBIDRAFT_03g025720 [Sorghum bicolor]
 gi|241927794|gb|EES00939.1| hypothetical protein SORBIDRAFT_03g025720 [Sorghum bicolor]
          Length = 1171

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           A+L +  +   KG +  S   A +    +  P+ V  S +  G
Sbjct: 760 AILEELGIEQPKGGIARSESDALAIASEIGYPVVVRPSYVLGG 802


>gi|239928482|ref|ZP_04685435.1| hypothetical protein SghaA1_09658 [Streptomyces ghanaensis ATCC
           14672]
          Length = 298

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y + V + +   +  AA  A  TL  P+ +  +  H   R       L    +  
Sbjct: 80  DLLGTYGIHVHRALPAPTPDAAAEAAHTLGYPVALKATAPHLRHRADLGGVRLDLADEEQ 139

Query: 70  VRVESS 75
           +R   +
Sbjct: 140 LRRAYA 145


>gi|168217184|ref|ZP_02642809.1| phosphoribosylamine--glycine ligase [Clostridium perfringens NCTC
           8239]
 gi|182380691|gb|EDT78170.1| phosphoribosylamine--glycine ligase [Clostridium perfringens NCTC
           8239]
          Length = 416

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A   V      A+S ++    P  V+K+   A G+             
Sbjct: 106 SKDFMKKYGVKTADYEVFYDYEEAKSYLENCKYPR-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +    I    E L   +I       G     + VE+    +    LS+ 
Sbjct: 152 -GVVICENKNQAI----ETLDLFMIDDVFNGAGK---KIVVEEFLQGVEASILSVT 199


>gi|169344454|ref|ZP_02865423.1| phosphoribosylamine--glycine ligase [Clostridium perfringens C str.
           JGS1495]
 gi|169297374|gb|EDS79483.1| phosphoribosylamine--glycine ligase [Clostridium perfringens C str.
           JGS1495]
          Length = 416

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A   V      A+S ++    P  V+K+   A G+             
Sbjct: 106 SKDFMKKYGVKTADYEVFYDYEEAKSYLENCKYPR-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +    I    E L   +I       G     + VE+    +    LS+ 
Sbjct: 152 -GVVICENKNQAI----ETLDLFMIDDVFNGAGK---KIVVEEFLQGVEASILSVT 199


>gi|91787845|ref|YP_548797.1| phosphoribosylamine--glycine ligase [Polaromonas sp. JS666]
 gi|91697070|gb|ABE43899.1| phosphoribosylamine--glycine ligase [Polaromonas sp. JS666]
          Length = 433

 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 23/129 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA ++++ +P A+    +   AA + +     P+ VVK+   A G+             
Sbjct: 106 SKAFMKRHGIPTAEYETFTDAVAAHAYVDEKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL----GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +L      I  +L       ++       G+RV    +E+      E    ++
Sbjct: 152 -GVVVAMTLHEAHEAIEFMLATSPDHNVLGVTHNEGGARV---VIEEFLQ-GEEASFIVM 206

Query: 124 VDRTSGMVA 132
            D  +    
Sbjct: 207 CDGKNVTPM 215


>gi|332519486|ref|ZP_08395953.1| phosphoribosylamine/glycine ligase [Lacinutrix algicola 5H-3-7-4]
 gi|332045334|gb|EGI81527.1| phosphoribosylamine/glycine ligase [Lacinutrix algicola 5H-3-7-4]
          Length = 431

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 25/127 (19%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  L K+N+P A  K     +V    + ++TL  P YV+K+   A G+           
Sbjct: 117 AKEFLYKHNIPTAAYKSFNAETVEDGYAFLETLK-PPYVLKADGLAAGK----------- 164

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +   +    ++++ +L            G+    V +E+  D   EL   +L D
Sbjct: 165 ---GVVILEDINEAKTELKAML-------VDAKFGNASTKVVIEEFLD-GIELSCFVLTD 213

Query: 126 RTSGMVA 132
             +  + 
Sbjct: 214 GKNYKIL 220


>gi|317486857|ref|ZP_07945669.1| carbamoyl-phosphate synthase [Bilophila wadsworthia 3_1_6]
 gi|316921896|gb|EFV43170.1| carbamoyl-phosphate synthase [Bilophila wadsworthia 3_1_6]
          Length = 1079

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 56/174 (32%), Gaps = 37/174 (21%)

Query: 7   QAKALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +++ L R+      + V +  +  ++        ++P P+ +  +    G          
Sbjct: 127 ESRELFRQAMENIGLKVPQSAIAHNMDDVRRIGSSMPFPMIIRPAFTLGG---------- 176

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
              + GG+    +++ +     +           G T S V+ V +E      +E  + +
Sbjct: 177 ---TGGGI--AYNMEDLEEIAGD-----------GLTASPVSEVMIEQSVIGWKEFEMEV 220

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           + D        + S      IE V          + + P   +T  +   + D 
Sbjct: 221 MRDTADNC-VIVCS------IENVDAMGVHTGDSITVAPAQTLTDREYQKMRDA 267


>gi|239636422|ref|ZP_04677424.1| phosphoribosylamine--glycine ligase [Staphylococcus warneri L37603]
 gi|239597777|gb|EEQ80272.1| phosphoribosylamine--glycine ligase [Staphylococcus warneri L37603]
          Length = 412

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY++P A+   I++   A   ++T   P+ + K                   + 
Sbjct: 107 AKRIMAKYDIPTAQYKEINNKEEALVFVETCDLPIVIKK---------------DGLAAG 151

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV + +        ++++ 
Sbjct: 152 KGVVIATKRDEAKEAVQQMF 171


>gi|222148841|ref|YP_002549798.1| propionyl-coenzyme A carboxylase alpha polypeptide [Agrobacterium
           vitis S4]
 gi|221735827|gb|ACM36790.1| propionyl-coenzyme A carboxylase alpha polypeptide [Agrobacterium
           vitis S4]
          Length = 1243

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 37/224 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L     VP+  G  ++ S   A S  + +  P+ ++KS    GG G     +  +  
Sbjct: 119 ARQLAADSGVPLLPGSGLLDSAEDALSQAELIGYPV-MLKSTAGGGGIGMQLCHDATSLQ 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                V+ + K+   D                       VY+E      R + + +  D 
Sbjct: 178 AAFDTVQRTAKASFGDA---------------------RVYLERFVSKARHVEVQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQARI 185
              ++A       G     + +   + I +    P  G++      L    + L      
Sbjct: 217 QGRVIAL------GERDCSLQRRNQKVIEET---PAPGLSDAVRQRLHAAAVSLGRSVHY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                   +Y     K+   LE+N  + +++    V ++    D
Sbjct: 268 RSAGTVEFIYDP-ARKEFYFLEVNTRLQVEHP---VTEAVFGID 307


>gi|218671709|ref|ZP_03521378.1| phosphoribosylamine--glycine ligase [Rhizobium etli GR56]
          Length = 423

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 23/120 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  +Y +P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDICARYGIPTGAYQRFNNAPKAKAYIRAQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   ++ + +           G  G+ V    VE   D     +  L   R +
Sbjct: 152 GVTVAMTLDEALAAVDDCF-----EGAFGAAGAEV---VVEAYLDGEEASFFCLCDGRHA 203


>gi|315653073|ref|ZP_07906001.1| carbamoyl-phosphate synthase [Lactobacillus iners ATCC 55195]
 gi|315489608|gb|EFU79242.1| carbamoyl-phosphate synthase [Lactobacillus iners ATCC 55195]
          Length = 1063

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 141 KKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIV 176


>gi|312141263|ref|YP_004008599.1| phosphoribosylglycinamide formyltransferase purt [Rhodococcus equi
           103S]
 gi|311890602|emb|CBH49920.1| phosphoribosylglycinamide formyltransferase PurT [Rhodococcus equi
           103S]
          Length = 404

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 28/107 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      S+    +A + +  P  V+K  + + G+G+               V  S
Sbjct: 136 GLPTSPYAFADSLDEVRAATERIGFPC-VIKPVMSSSGKGQS--------------VARS 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNC--VYVEDGADILRELYL 120
              +             + +   +G RVN   V VE   D   E+ L
Sbjct: 181 ADDLEK-----------SWEYALSGGRVNKGRVIVEGFVDFDYEITL 216


>gi|302349008|ref|YP_003816646.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus
           saccharovorans 345-15]
 gi|302329420|gb|ADL19615.1| Acetyl coenzym A synthetase (ADP-forming) [Acidilobus
           saccharovorans 345-15]
          Length = 712

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 9/86 (10%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
            + E ++  +LR Y +PVA           +S  + L  P  V+K               
Sbjct: 497 KLLEDESLEVLRAYGIPVADYCTAVDEDDVKSCAQGLGFP-LVMKV--------ISPDII 547

Query: 62  LPADSKGGVRVESSLKSVISDIREIL 87
             +D  G V   +S+    S    IL
Sbjct: 548 HKSDVGGVVLNINSVDEATSAYMSIL 573


>gi|302342119|ref|YP_003806648.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075]
 gi|301638732|gb|ADK84054.1| CoA-binding domain protein [Desulfarculus baarsii DSM 2075]
          Length = 738

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 40/297 (13%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E  +K +L +Y VPV +    +    A +  + +  P+ V+K             K  
Sbjct: 18  LSEADSKRVLAQYGVPVVEERRAADADQAAAIAQAMGWPV-VLK---------GLGAKLT 67

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                G VR+  +    +      + +T      G          ++      RE    L
Sbjct: 68  HKSELGLVRLGLTSAEAVRQAAAAMAATAGADLEG--------FLLQPQVAGRREFVAGL 119

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQG 181
           L D   G V       GG+  E +     +      ID    ++  +++ S   +   +G
Sbjct: 120 LTDDQFGPVVMFG--LGGVFTEALDDAVFRIA---PIDQAQALSMIDELRSRALLGPFRG 174

Query: 182 QA---RIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHL 237
           +A   R         L +   D+  +  ++INPL++  +G++R +D+ I     A+ R  
Sbjct: 175 EAAADRQQLAAALVGLSRLAMDEPRVREIDINPLLVSPDGQVRAVDALIVL-GQAVRR-- 231

Query: 238 DIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPA 294
                   SE       A    L +      IG                 L+GG P 
Sbjct: 232 --------SEARPPVSPAAMAALFHPNSVAYIGASDVFGKWGNRLF-TDTLHGGFPG 279


>gi|296271675|ref|YP_003654306.1| acetyl-CoA carboxylase biotin carboxylase [Arcobacter nitrofigilis
           DSM 7299]
 gi|296095850|gb|ADG91800.1| acetyl-CoA carboxylase, biotin carboxylase [Arcobacter nitrofigilis
           DSM 7299]
          Length = 450

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  + +  VPV  G    + +V       + +  P+ + K+    GGRG
Sbjct: 121 AKEEMVRAGVPVVPGSTGAVHNVDEGRKVAREIGYPI-MAKASAGGGGRG 169


>gi|302553264|ref|ZP_07305606.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470882|gb|EFL33975.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 420

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 22/131 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +ALL    V   +  ++ S      A++ +  P+ +               K       G
Sbjct: 117 RALLAG-GVRTPRSALVRSEPELLDAVEAIGLPVVI---------------KPYDFGGSG 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT-GSRVNCVYVEDGADILRELYLSLLVDRT 127
           GV + ++ +  I+ + E   S  +  Q G   G   +   VE   D   E+ + +L    
Sbjct: 161 GVVLATTREEAIAGLAE---SKAVIAQYGAAFGILGDKYLVERFVDSDDEVSVEVLC--G 215

Query: 128 SGMVAFIASTQ 138
           +G    +A T+
Sbjct: 216 AGRAQVLAVTE 226


>gi|170289825|ref|YP_001736641.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170173905|gb|ACB06958.1| Acyl-CoA synthetase (NDP forming) [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 464

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 294 ANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIF-GGIMRCDVLVKGILSAVKEVKIN 352
           AN +D+ G A  D           +  V  + +      +     + KGI+ A+KE   +
Sbjct: 347 ANPIDITGMAPDDWYYMGTLAALKNPDVDALTVLYCQTAVTTPIGVAKGIVDAIKEAGNS 406

Query: 353 IPLVMRL-EGANVDIGNRLIAE 373
            P+ + +  G  V      + +
Sbjct: 407 KPVTVGMVGGPEVAEAVSFLNK 428


>gi|163784258|ref|ZP_02179177.1| 5'-phosphoribosylglycinamide transformylase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880471|gb|EDP74056.1| 5'-phosphoribosylglycinamide transformylase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 253

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 28/142 (19%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +  +P +K    S +   + A+K +  P+ VVK  + + G+G+             V+ 
Sbjct: 122 EEVGLPTSKYRFASDIETYKKAVKEIGFPV-VVKPVMSSSGKGQS-----------IVKT 169

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E  ++      +E           G  G     V +E+  D   E+ L L V   +    
Sbjct: 170 EEEIEKAWYYAQE--------NARGKGGE----VIIEEFIDFDYEITL-LTVRTKNQGTL 216

Query: 133 F---IASTQGGMDIEEVAKDYP 151
           F   I   Q   D  E  + +P
Sbjct: 217 FCPPIGHIQVNGDYWESWQPHP 238


>gi|15894675|ref|NP_348024.1| phosphoribosylamine--glycine ligase [Clostridium acetobutylicum
           ATCC 824]
 gi|20139608|sp|Q97J90|PUR2_CLOAB RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|15024334|gb|AAK79364.1|AE007651_7 Phosphoribosylamine-glycine ligase [Clostridium acetobutylicum ATCC
           824]
 gi|325508812|gb|ADZ20448.1| phosphoribosylamine--glycine ligase [Clostridium acetobutylicum EA
           2018]
          Length = 416

 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 38/231 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KYNV  A+  V  +   +   +K    P+ V+K+   A G+             
Sbjct: 106 SKDFMKKYNVKTAEYAVFENSEESLEYLKKCTYPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +            E + + ++      +G     V +E+  + +    LS+   + 
Sbjct: 152 -GVVICED----YKLAEETIKAFMVKDVFKGSGK---KVVIEEYLEGVEASILSITDGKA 203

Query: 128 SGMVAFIASTQG--------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLEL 179
              + F++S           G +   +    P       +  L     E +     ++ +
Sbjct: 204 I--IPFVSSKDHKQIFDGNKGPNTGGMGAISPNPYCTEEV--LKSFEEEILKP--TLIGI 257

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
           Q +     G +F  L      K + LLE N  +     ++ +   K  F D
Sbjct: 258 QEERMDFTGIIFFGL--MITKKGVYLLEYNVRLGDPETQVVLYLMKSDFVD 306


>gi|330999283|ref|ZP_08323000.1| phosphoribosylamine--glycine ligase [Parasutterella
           excrementihominis YIT 11859]
 gi|329575141|gb|EGG56692.1| phosphoribosylamine--glycine ligase [Parasutterella
           excrementihominis YIT 11859]
          Length = 425

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+    ++  AA + ++    P+ V+K+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYETFTNAEAAHAYVRHKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +     +  IL       Q    G     + +ED  D   E    ++VD  
Sbjct: 152 -GVVVAMTEEDAHEAVDFIL-------QDNKLGDAGARIVIEDYLD-GEEASFIVMVDGE 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 HVLPM 207


>gi|303256642|ref|ZP_07342656.1| phosphoribosylamine--glycine ligase [Burkholderiales bacterium
           1_1_47]
 gi|302860133|gb|EFL83210.1| phosphoribosylamine--glycine ligase [Burkholderiales bacterium
           1_1_47]
          Length = 425

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+    + V AA + ++    P+ V+K+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYETFTDVEAAHAYVRHKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +     +  +L       Q    G     + +ED  D   E    ++VD  
Sbjct: 152 -GVVVAMTEEDAHEAVDFML-------QDNKLGDAGARIVIEDYLD-GEEASFIVMVDGE 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 HVLPM 207


>gi|217970396|ref|YP_002355630.1| Cyanophycin synthase (L-arginine-adding) [Thauera sp. MZ1T]
 gi|217507723|gb|ACK54734.1| Cyanophycin synthase (L-arginine-adding) [Thauera sp. MZ1T]
          Length = 664

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 5/66 (7%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +PV     +     A    + L  P+ VVK       R  G       +++  VR   +
Sbjct: 247 GLPVPVHQAVLDADEAVRVARRLGFPV-VVKPV----DRDGGVGVSTGLETEEEVRAAYA 301

Query: 76  LKSVIS 81
             S +S
Sbjct: 302 RASAVS 307


>gi|148240464|ref|YP_001225851.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. WH 7803]
 gi|147849003|emb|CAK24554.1| Biotin carboxylase (A subunit of acetyl-CoA carboxylase)
           [Synechococcus sp. WH 7803]
          Length = 447

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 91/277 (32%), Gaps = 37/277 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VP   G   ++S    A      +  P+ ++K+    GGRG          
Sbjct: 120 AKTTMQAVGVPTVPGSEGLLSGPDEAADLALAMGYPV-MIKATAGGGGRGMRLV------ 172

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +   ++E+  K+   +     G+                +Y+E   D  R + + +L D
Sbjct: 173 -QSADQLETLYKAAQGEAEAAFGNP--------------GLYMEKFIDKPRHVEVQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQAR 184
           R       +   +    I+   +   ++     +D  + +   E   +    +  +G   
Sbjct: 218 RHGN---VVHLGERDCSIQRRHQKLLEEAPSPALDKDLRMRMGEAAVAAARSINYEGAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
           ++   D     Y  F + +  +   +P+  M  G  L     +I+  +        I EL
Sbjct: 275 VEFLLDRSGGFY--FMEMNTRIQVEHPVTEMVTGIDLIAEQLRIAGGEPISVSQDQI-EL 331

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAG 277
           R  + E     E   HN       G I       G G
Sbjct: 332 RGHAIECRINAEDASHNFR--PAPGRITGWLPPGGPG 366


>gi|126567335|emb|CAL47316.1| ATP citrate lyase beta subunit [uncultured prokaryote]
          Length = 93

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 16/93 (17%)

Query: 270 GCMVNGAGLAMATMDIIKLY----GGAP---ANFLDVGGGADQDKVAAAFKIIT------ 316
             MV G G ++   D I  +    GG+    AN+ +  GG +  +       I       
Sbjct: 1   WTMVAGGGASVVYADTIADFAEANGGSVSDLANYGEYSGGPNTSETKFYADTIIDLMTRH 60

Query: 317 SDSSVKGILINIFGGIMRCDVLVK---GILSAV 346
            D   +  ++ I G I     + K   GI+ + 
Sbjct: 61  KDPKGEDKILIIGGAIANFTDVAKTFTGIIQSF 93


>gi|114650510|ref|XP_001148442.1| PREDICTED: propionyl-Coenzyme A carboxylase, alpha polypeptide
           isoform 4 [Pan troglodytes]
          Length = 744

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|71082859|ref|YP_265578.1| phosphoribosylamine--glycine ligase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762718|ref|ZP_01264683.1| Phosphoribosylamine--glycine ligase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|71061972|gb|AAZ20975.1| Phosphoribosylamine--glycine ligase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91718520|gb|EAS85170.1| Phosphoribosylamine--glycine ligase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 421

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 20/112 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  K+N+P AK  +  + + A S +     P  VVK+   A G+              
Sbjct: 107 KKICEKHNIPTAKFGIFENANDAISFLDKTQFP-LVVKADGLASGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTL-----ITKQTGPTGSRVNCVYVEDGADIL 115
           GV +  +       I+E+          I  +    G  ++   + DG +I 
Sbjct: 152 GVYICENKDDANLAIKEVFDGKFGLAKNILIEEFLVGEEMSYFIISDGKEIK 203


>gi|42519201|ref|NP_965131.1| carbamoyl phosphate synthase large subunit [Lactobacillus johnsonii
           NCC 533]
 gi|81667751|sp|Q74J34|CARB_LACJO RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|41583488|gb|AAS09097.1| carbamoylphosphate synthase large subunit [Lactobacillus johnsonii
           NCC 533]
          Length = 1062

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L ++   PV     +++V  A      +  P+ V  +                  + G
Sbjct: 133 KELCKELGEPVPPSTTVNTVEEALEFGDRIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+   ++ + +    +  L  + +T+     
Sbjct: 180 GI--CNNHEELAKIAKNGLELSPVTECLIEK 208


>gi|77462742|ref|YP_352246.1| propionyl-CoA carboxylase alpha subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77387160|gb|ABA78345.1| Propionyl-CoA carboxylase alpha subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 695

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L ++  V    G   +I+    A      +  P+ +  S                  
Sbjct: 148 SKKLAKEAGVSTVPGYMGLIADADEAVKISNEIGYPVMIKAS---------------AGG 192

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   V             +K         + +++E      R + + +L D
Sbjct: 193 GGKGMRIAWSEAEVKEGFE-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLAD 245

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
           +    V      +    I+   +   ++     +D        E   +L   +       
Sbjct: 246 KHGNCVYL---HERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQACALAKAVGYASAGT 302

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D   N Y  F + +  L   +P+  +  G
Sbjct: 303 VEFIVDGQKNFY--FLEMNTRLQVEHPVTELITG 334


>gi|17549161|ref|NP_522501.1| acetyl-CoA carboxylase biotin carboxylase subunit [Ralstonia
           solanacearum GMI1000]
 gi|17431412|emb|CAD18091.1| putative biotin carboxylase protein [Ralstonia solanacearum
           GMI1000]
          Length = 455

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 106/330 (32%), Gaps = 41/330 (12%)

Query: 8   AKALLRKYNVPVAKG---VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R+  VP   G    +        +    +  P+ +VK+   AGG G    + +  
Sbjct: 119 AKRAMREAGVPCVPGPDTSLPEDPAEVLAIAHGIGFPV-IVKA---AGGGGGRGMRVVHE 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S     +  + +          G+                VY+E      R + + +L 
Sbjct: 175 ASALADALALTREEARRA----FGNP--------------EVYIEKFLTHPRHVEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQA 183
           DR      ++ S      ++   +   ++     ID  LI    E  A+ C  +   G  
Sbjct: 217 DRYGHA-VWLGSR--DCSLQRRHQKVIEEAPAPGIDASLIAEVGERCAAACRQIGYCGVG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
             +        Y  F + +  L   +P+  M +G  +     +++  +    R  DI   
Sbjct: 274 TFEFLYENGAFY--FIEMNTRLQVEHPVTEMTSGIDIVQQQIRVARGEPLTLRQGDI-AC 330

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLY---GGAPANFL 297
           R  + E     E   H  +++   G I    +  G G+ + T                  
Sbjct: 331 RGHALECRINAE---HPDTFMPSPGVITGWQLPGGYGVRVDTHAGAGYRVPSHYDSMIAK 387

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILIN 327
            +  GA ++      ++   +  V GI  N
Sbjct: 388 LIVHGASREDALQRMRLALDELQVDGIATN 417


>gi|18977888|ref|NP_579245.1| GMP synthase subunit B [Pyrococcus furiosus DSM 3638]
 gi|23821600|sp|Q8U0R8|GUAAB_PYRFU RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|18893648|gb|AAL81640.1| GMP synthase [Pyrococcus furiosus DSM 3638]
          Length = 313

 Score = 37.2 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 7/156 (4%)

Query: 25  ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84
           + S  AA  A + +   L+ V        +G+  F       + G+ +   + +      
Sbjct: 36  VDSSTAAVLAHRAIGDRLHAVFVNTGFLRKGEPEFVIKTFRDEFGMNLHY-VDAQDRFFA 94

Query: 85  EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIE 144
            + G T   ++    G     V+ E   DI  E  +     + +    +I S QG +   
Sbjct: 95  ALKGVTDPEEKRKIIGRVFIEVFEEVAKDIGAEYLI-----QGTIAPDWIES-QGKIKSH 148

Query: 145 EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQ 180
                 P+K+   +I+PL  +  ++V  L   L L 
Sbjct: 149 HNVGGLPEKLNLKIIEPLRDLYKDEVRQLAKELGLP 184


>gi|288561047|ref|YP_003424533.1| carbamoyl-phosphate synthase large subunit CarB [Methanobrevibacter
           ruminantium M1]
 gi|288543757|gb|ADC47641.1| carbamoyl-phosphate synthase large subunit CarB [Methanobrevibacter
           ruminantium M1]
          Length = 1058

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 38/188 (20%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L   +    + P+ K   + SV  A  A++ +  P+ V  +    G            
Sbjct: 127 RDLFANFMDRLDEPIPKCHAVESVEGALEAVEEIGYPVIVRPAFTLGG------------ 174

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GG+    + + +I      L  +            +N V +++     +E+   ++ 
Sbjct: 175 -TGGGI--AHNKEELIEVTTHGLDMS-----------YINQVLIDESVLGWKEIEFEVM- 219

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI----DPLIGVTSEDVASLCDMLELQ 180
            R       I      +D   +       I    I    D +     +    +   L + 
Sbjct: 220 -RDKNDTCIIVCNMENVDP--MGIHTGDSIVVAPIQNLNDEVCQRLRDASIKIIRNLGIN 276

Query: 181 GQARIDGG 188
           G   I   
Sbjct: 277 GGCNIQFA 284


>gi|254934033|gb|ACT87625.1| carbamoylphosphate synthetase [Orthonama obstipata]
          Length = 974

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 19/83 (22%)

Query: 9   KALLRK--YNV--PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + +  +  Y++   VA    ++SV  A +A K +  P+           R       L +
Sbjct: 474 RKIFAEKVYSIGEKVAPSAAVTSVDEAVAAAKQIGYPVMA---------RSAFSLGGLGS 524

Query: 65  DSKGGVRVESSLKSVISDIREIL 87
                    ++ + + +   + L
Sbjct: 525 G------FANNEEELRALAHQAL 541


>gi|323339842|ref|ZP_08080111.1| carbamoyl-phosphate synthase [Lactobacillus ruminis ATCC 25644]
 gi|323092715|gb|EFZ35318.1| carbamoyl-phosphate synthase [Lactobacillus ruminis ATCC 25644]
          Length = 1061

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L++  N P+     +++V  A      +  P+ V
Sbjct: 133 KELMQDLNEPIPASKTVNTVEEALEFADEIGYPVIV 168


>gi|172045945|sp|Q58881|PURT_METJA RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
          Length = 389

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 24/105 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     S+     A++ L  P  VVK  + + G+G+             VR E  
Sbjct: 125 GLKTAKYEFADSLEELRDAVEKLGLPC-VVKPIMSSSGKGQSV-----------VRSEED 172

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++      +E           G  G   N V VE+  +   E+ L
Sbjct: 173 IEKAWKIAKE-----------GARGIG-NRVIVEEFINFDYEITL 205


>gi|169828402|ref|YP_001698560.1| membrane protein FdrA [Lysinibacillus sphaericus C3-41]
 gi|168992890|gb|ACA40430.1| Protein fdrA [Lysinibacillus sphaericus C3-41]
          Length = 584

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 17/137 (12%)

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGADQDKVAAAFKIITSDSS 320
           +G+IG +            II  YG    N L     D+        +  + K +  D  
Sbjct: 190 EGDIGIVGASGTGIQEVTTIIDRYGKGVTNALGTGGRDLSTEVGAITMLDSIKALNQDPK 249

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           VK I +         + + + +L+ ++   I+ P+V    G               N+  
Sbjct: 250 VKVITVI---SKPPAEEVQRKVLNLLR--NIDKPVVTLFLGDKPSYQEE-------NIYH 297

Query: 381 AIDLDDAAQKIVHAVKG 397
           A  L++AA   V    G
Sbjct: 298 AYTLEEAAVVAVQLSNG 314


>gi|39998157|ref|NP_954108.1| D-alanine--D-alanine ligase [Geobacter sulfurreducens PCA]
 gi|81701145|sp|Q748D8|DDL_GEOSL RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|39985103|gb|AAR36458.1| D-alanine--D-alanine ligase [Geobacter sulfurreducens PCA]
          Length = 316

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 29/127 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK +     + +A   V+      +   +    P+ V  SQ                 S 
Sbjct: 106 AKEVFAARGLTIAPYRVVRRGETVDPVAEGFGYPVVVKPSQ---------------EGSS 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S + + S +                    + + VE      RE+ + +L DR 
Sbjct: 151 VGVSIVKSPEELPSALELAFRYD-------------DDILVERFIK-GREIQIGILDDRA 196

Query: 128 SGMVAFI 134
            G +  +
Sbjct: 197 MGAIEIV 203


>gi|315646059|ref|ZP_07899180.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus vortex
           V453]
 gi|315278820|gb|EFU42134.1| carbamoyl-phosphate synthase, large subunit [Paenibacillus vortex
           V453]
          Length = 1068

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 73/216 (33%), Gaps = 47/216 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+R+   PV +  +++++  A      +  PL V  +    G             + G
Sbjct: 133 RELMRELEQPVPESTIVTTLEEAMDFADEIGYPLIVRPAYTLGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+   ++ + +   +   L  + IT+             +E     ++E+   ++ D   
Sbjct: 180 GI--CATEEELRETVSSGLRYSPITQC-----------LIEKSIAGMKEVEYEVMRDAND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQG 181
             +          ++E            +++ P   ++  +          +   L ++G
Sbjct: 227 NCIVV-------CNMENFDPVGVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALNIEG 279

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              +    L PN Y+ +       +E+NP +   + 
Sbjct: 280 GCNVQFA-LDPNSYQYYV------IEVNPRVSRSSA 308


>gi|289668839|ref|ZP_06489914.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 1080

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIDIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|237747751|ref|ZP_04578231.1| phosphoribosylglycinamide synthetase [Oxalobacter formigenes
           OXCC13]
 gi|229379113|gb|EEO29204.1| phosphoribosylglycinamide synthetase [Oxalobacter formigenes
           OXCC13]
          Length = 424

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK+ + ++ +P AK    S + AA   I     P+ V+K+   A G+             
Sbjct: 102 AKSFMERHGIPTAKYQTFSDLAAAHKYIDEQGAPI-VIKADGLAAGK------------- 147

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L      +       L   + G  G+RV    +E+  +   E    +LVD  
Sbjct: 148 -GVIVAMNLTEAHDAVD----MMLSDNKLGDAGARV---VIEEFLE-GEEASFIVLVDGK 198

Query: 128 SGMVA 132
           + +  
Sbjct: 199 NILPL 203


>gi|116248848|ref|YP_764689.1| putative pimeloyl-CoA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115253498|emb|CAK11890.1| putative pimeloyl-CoA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 701

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 21/227 (9%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E QAK LL    +PV +  +++S   A SA   L  P+ V+K         +    + 
Sbjct: 483 LTERQAKNLLAAEGLPVPQQYLVTSADKAASAAAKLSFPV-VMKI--------ESPDIQH 533

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
             ++ G     +S   V      I    + + +     + +  V V++      E  + L
Sbjct: 534 KTEAGGVKLGVASEPEVRQAFDAI----MASARAYAPDADLRGVSVQEMVTGGVEALVGL 589

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQK--IFKLLIDPLIGVTSEDVASLCDMLELQ 180
           +     G    +    GG+ +E V         I     D +IG T    + L       
Sbjct: 590 VRHEPFGFGLVVG--IGGVLVELVNDSAFDLLPIDLARADAMIGKTK-LASLLEGYRGSP 646

Query: 181 GQARIDGGDLFPNLYKAFCDK--DMSLLEINPLIIMKNGR-LRVLDS 224
              R     L   L         D+  +++NP+ ++ +G  +R+LD+
Sbjct: 647 RADRQALAKLLVKLSDFAARYGDDIEAVDLNPVAVLPDGEGVRILDA 693


>gi|76803256|ref|YP_331351.1| arginine biosynthesis regulator [Natronomonas pharaonis DSM 2160]
 gi|76559121|emb|CAI50720.1| probable arginine biosynthesis regulator (lysine biosynthesis
           regulator lysX homolog) [Natronomonas pharaonis DSM
           2160]
          Length = 287

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 17/108 (15%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L + +VP     V  +  +A  +I++   P  V+K  I + GR   +             
Sbjct: 97  LAEADVPTPATEVAFTKESAMESIESFGYPC-VLKPVIGSWGRLMAKIDS---------- 145

Query: 72  VESSLKSVISDIREILG----STLITKQTGPTGSRVNCVYVEDGADIL 115
                   I + +E LG         ++      R   V   DG  I 
Sbjct: 146 --KDAAEAILEHKETLGHYEHKVFYIQEFVEKPGRDIRVVATDGEPIA 191


>gi|25029150|ref|NP_739204.1| phosphoribosylglycinamide formyltransferase 2 [Corynebacterium
           efficiens YS-314]
 gi|23494438|dbj|BAC19404.1| putative phosphoribosylglycinamide formyltransferase
           [Corynebacterium efficiens YS-314]
          Length = 425

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 24/105 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +     S+     +A + L  P  VVK  + + G+G+             V     
Sbjct: 153 GLPTSGYEFCSTFEEFTAAAERLGYP-NVVKPVMSSSGKGQSV-----------VTSAED 200

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           L+S       + G+ +              V VE   +   E+ L
Sbjct: 201 LESAWEYA--MSGARVSN----------QRVIVEQFVEFDYEITL 233


>gi|319936904|ref|ZP_08011315.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. 29_1]
 gi|319808003|gb|EFW04578.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. 29_1]
          Length = 1072

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 55/185 (29%), Gaps = 34/185 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +AK  + ++V  A    + L  P+ V  +    G                
Sbjct: 133 KKEMNKLGIEMAKSEIANTVEHALEIAEDLGYPVVVRPAYTMGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + + +   L ++L           V+   +E+      EL + ++  R +
Sbjct: 178 GGGLVYNVEELKTVVSRGLQASL-----------VHQCLIEESILGWEELEVEIV--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTS---EDVASLCDMLELQGQAR 184
                       +D   +             +     V     +    + + + + G   
Sbjct: 225 KGNMITVCFIENIDP--LGVHTGDSFCSAPMLTISQEVQDRLKDQAFRIVESVGVIGGTN 282

Query: 185 IDGGD 189
           +    
Sbjct: 283 VQFAH 287



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 22/148 (14%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P+ +  +  +V  A    K +  PL V  S +  G                G+ V    
Sbjct: 680 IPMPESGMAVNVEEALEIAKRIGYPLMVRPSYVLGG---------------RGMEVVYDN 724

Query: 77  KSVISDIREILGST----LITKQTGPTGSRVNCVYVEDGADI---LRELYLSLLVDRTSG 129
           +S+   ++  +G T    ++  +            + DG ++       ++ L    +  
Sbjct: 725 ESLEQYMKAAVGVTPDRPILIDRFLNNAMECEADAISDGTNVFVPAVMEHIELAGIHSGD 784

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKL 157
               + S    M   E  K+Y +KI K 
Sbjct: 785 SACILPSKHIPMRHLETIKEYTKKIAKE 812


>gi|260598965|ref|YP_003211536.1| hypothetical protein CTU_31730 [Cronobacter turicensis z3032]
 gi|260218142|emb|CBA32955.1| Uncharacterized protein yfiQ [Cronobacter turicensis z3032]
          Length = 887

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 86/248 (34%), Gaps = 37/248 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   + +L  Y +      +      A      +  P+ +         + +    
Sbjct: 482 LDTHE--VRPILEAYGLHTLPTWIAGDSAEAVHIAGQIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      +L    +T        R++ + V+  A+    +EL
Sbjct: 531 PHKSEVQGVMLYLRTAHEVQRAADAMLDRVKMTWPQA----RIHGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDML 177
            + ++          +   +GG++        P+    + + PL + +    V       
Sbjct: 587 RV-VVEHDPVFGPLIML-GEGGVEW------RPEAQAAVALPPLNMNLARYLVIQAIKSG 638

Query: 178 ELQGQARID------GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS--- 227
           +++G++ +          L   +     D  +++ L+++PL+   +     LD  +    
Sbjct: 639 KIRGRSALRPLDIAGLSQLLVRVSNLVVDCPEIARLDVHPLLASGS-DFTALDVTMQLEP 697

Query: 228 FDDNALYR 235
           F+ +A  R
Sbjct: 698 FNGDADAR 705


>gi|260101455|ref|ZP_05751692.1| carbamoyl-phosphate synthase large subunit chain [Lactobacillus
           helveticus DSM 20075]
 gi|260084729|gb|EEW68849.1| carbamoyl-phosphate synthase large subunit chain [Lactobacillus
           helveticus DSM 20075]
          Length = 858

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     + +V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCQKLGEPVPPSKTVKTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    +   +    +  L  + +T+     
Sbjct: 180 GI--CHNHDELAEIAKNGLELSPVTECLIEK 208


>gi|227890076|ref|ZP_04007881.1| carbamoyl phosphate synthase large subunit [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849520|gb|EEJ59606.1| carbamoyl phosphate synthase large subunit [Lactobacillus johnsonii
           ATCC 33200]
          Length = 1062

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L ++   PV     +++V  A      +  P+ V  +                  + G
Sbjct: 133 KELCKELGEPVPPSTTVNTVEEALEFGDRIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+   ++ + +    +  L  + +T+     
Sbjct: 180 GI--CNNHEELAKIAKNGLELSPVTECLIEK 208


>gi|15669679|ref|NP_248492.1| phosphoribosylglycinamide formyltransferase 2 [Methanocaldococcus
           jannaschii DSM 2661]
 gi|1592123|gb|AAB99496.1| phosphoribosylglycinamide formyltransferase 2 (purT)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 393

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 24/105 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  AK     S+     A++ L  P  VVK  + + G+G+             VR E  
Sbjct: 129 GLKTAKYEFADSLEELRDAVEKLGLPC-VVKPIMSSSGKGQSV-----------VRSEED 176

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           ++      +E           G  G   N V VE+  +   E+ L
Sbjct: 177 IEKAWKIAKE-----------GARGIG-NRVIVEEFINFDYEITL 209


>gi|332796787|ref|YP_004458287.1| lysine biosynthesis enzyme LysX [Acidianus hospitalis W1]
 gi|332694522|gb|AEE93989.1| lysine biosynthesis enzyme LysX [Acidianus hospitalis W1]
          Length = 266

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGR 54
           L K  VP+   V+  S  A   A + +  P  + K  I + GR
Sbjct: 79  LFKAGVPIPDSVIAMSPDATLKAYEQIGFP-LIDKPPIGSWGR 120


>gi|329767647|ref|ZP_08259167.1| carbamoyl-phosphate synthase large subunit [Gemella haemolysans
           M341]
 gi|328839074|gb|EGF88660.1| carbamoyl-phosphate synthase large subunit [Gemella haemolysans
           M341]
          Length = 1058

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV +  +I+++  A   +  +  P+ V
Sbjct: 133 RDLMNELNEPVPESAIITTLEEAREFVAEIGYPVIV 168



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K ++P   G     V  A    + +  P+ V  S +  G
Sbjct: 672 ELLHKLDIPQPLGKTAFDVETAVKNAEEIGYPVLVRPSYVLGG 714


>gi|307718547|ref|YP_003874079.1| pyruvate carboxylase subunit A [Spirochaeta thermophila DSM 6192]
 gi|306532272|gb|ADN01806.1| pyruvate carboxylase subunit A [Spirochaeta thermophila DSM 6192]
          Length = 442

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 30/214 (14%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK   RKY VPV  G    +  V  A + ++ +  P+ V                    
Sbjct: 118 QAKETARKYGVPVIPGSDGAVEDVAQARALVREMGFPVIV------------KAAAGGGG 165

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  L+  +    +                    +Y+E      R + + LL 
Sbjct: 166 KGMRIVWKEEDLERTLRIASQEAEKAFSDG----------TLYIEKFLQNPRHVEVQLLG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D        +   +    +++  +   ++    ++ P +     E    L   +   G  
Sbjct: 216 DAHGN---VVHLGERDCSVQKNHQKLVEESPSPVVTPEMREAMGEAAVRLFKGIGYVGAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++        Y  F + +  +   +P+  M  G
Sbjct: 273 TVEFLVADGRFY--FMEVNARIQVEHPVTEMITG 304


>gi|302123215|gb|ADK93199.1| CAD [Toxomerus marginatus]
          Length = 1250

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 21/111 (18%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + +      +    VA   +  SV  A +A ++L  P+           R       L +
Sbjct: 442 RKIFADRVNEIGEKVAPSEIAYSVEEALAAAESLGYPVMA---------RAAFSLGGLGS 492

Query: 65  DSKGGVRVESSLKSVISDIREILGS--TLITKQTGPTGSRVNCVYVEDGAD 113
                    ++ + + +   + L     LI  ++      V    V D  D
Sbjct: 493 G------FANNKEELRNLAEQALAHSSQLIIDKSLKGWKEVEYEVVRDAYD 537


>gi|299483104|gb|ADJ19299.1| carbamoyl phosphate synthetase-aspartate
           transcarbamoylase-dihydroorotase [Laxotela hauseri]
          Length = 1293

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 9   KALLRK----YNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + +  +        VA    + SV  A  A + L  P+    +    GG G G       
Sbjct: 484 RKIFAERVAEIGEKVAPSEAVYSVQEALEAAEKLGYPVMARXAAFSLGGLGSG------- 536

Query: 65  DSKGGVRVESSLKSVISDIREILG--STLITKQTGPTGSRVNCVYVEDGAD 113
                    S+ + +IS  ++ L   + LI  ++      V    V D  D
Sbjct: 537 -------FASNKEELISLAQQALPHSNQLIIDKSLKGWKEVEYEVVRDAYD 580


>gi|291436808|ref|ZP_06576198.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291339703|gb|EFE66659.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 275

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y + V + +   +  AA  A  TL  P+ +  +  H   R       L    +  
Sbjct: 57  DLLGTYGIHVHRALPAPTPDAAAEAAHTLGYPVALKATAPHLRHRADLGGVRLDLADEEQ 116

Query: 70  VRVESS 75
           +R   +
Sbjct: 117 LRRAYA 122


>gi|237753279|ref|ZP_04583759.1| biotin carboxylase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375546|gb|EEO25637.1| biotin carboxylase [Helicobacter winghamensis ATCC BAA-430]
          Length = 456

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPL 42
           AK +++K  VPV  G    + S   A    K +  P+
Sbjct: 124 AKEVMKKAGVPVVPGSDGAVESKEQAIKLAKEIGYPV 160


>gi|257386837|ref|YP_003176610.1| alpha-L-glutamate ligase [Halomicrobium mukohataei DSM 12286]
 gi|257169144|gb|ACV46903.1| alpha-L-glutamate ligase, RimK family [Halomicrobium mukohataei DSM
           12286]
          Length = 312

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 13/78 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L   +VP     V  +  AA  +I+    P  V+K  + + GR   +             
Sbjct: 97  LVDADVPTPNTDVAFTKDAAMESIEEFGYPC-VLKPVVGSWGRLMAKIDS---------- 145

Query: 72  VESSLKSVISDIREILGS 89
              S    I + +E LG 
Sbjct: 146 --RSAAEAILEHKETLGH 161


>gi|229818012|ref|ZP_04448294.1| hypothetical protein BIFANG_03299 [Bifidobacterium angulatum DSM
           20098]
 gi|229784616|gb|EEP20730.1| hypothetical protein BIFANG_03299 [Bifidobacterium angulatum DSM
           20098]
          Length = 422

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ ++++P AK      +  A++ ++    P+ V+K+   A G+             
Sbjct: 109 AKQLMERHSIPTAKYHTFEELEPAKAYVQEHGAPI-VIKADGLAAGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V   + + I+ + +I     +  + G  G+    V +ED  +
Sbjct: 155 -GVTVAMDIDTAINALDDI----FVDHRFGAAGA---KVVIEDFLE 192


>gi|57526509|ref|NP_001002746.1| propionyl-CoA carboxylase alpha chain, mitochondrial [Danio rerio]
 gi|49901428|gb|AAH76408.1| Propionyl-Coenzyme A carboxylase, alpha polypeptide [Danio rerio]
 gi|161612218|gb|AAI55773.1| Propionyl-Coenzyme A carboxylase, alpha polypeptide [Danio rerio]
          Length = 709

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K + +   V    G   V+     A      +  P+ +  S                 
Sbjct: 160 ESKLIAKAAKVNTIPGFDGVVKDAEEAVKIAGEIGYPVMIKAS---------------AG 204

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  + +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 205 GGGKGMRIAWNDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 257

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   SL   ++     
Sbjct: 258 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPDTRRKMGEQAVSLAKAVKYSSAG 314

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 315 TVEFLVDSKKNFY--FLEMNTRLQVEHPITECITG 347


>gi|329941088|ref|ZP_08290367.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces griseoaurantiacus M045]
 gi|329299619|gb|EGG43518.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces griseoaurantiacus M045]
          Length = 379

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 55/178 (30%), Gaps = 40/178 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG----GVR 71
            VP  +  ++S      +               +  GG G G    L     G    GV 
Sbjct: 107 GVPCPRHRIVSGPEDVAAFAAE----------GVPEGGEGDGFPVVLKTVRGGYDGKGVW 156

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+  D +REL  +++      + 
Sbjct: 157 VVHSAAEAAEPFR--------------AGVPV---LAEEKVDFVRELAANVVRSPHGQAV 199

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-SLCDMLELQGQARID 186
               + S Q G   + V    P       +D  + + +E++A ++   L + G   ++
Sbjct: 200 AYPVVESRQVGGVCDTVIAPAPD------LDEALALRAEEMALNIAKELGVVGHLAVE 251


>gi|318604496|emb|CBY25994.1| protein acetyltransferase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 880

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAEQLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 AHKSEVQGVMLYLRTAMEVQRAADDILDRVKRTYPQA----RIDGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           +   LQ         L   +     D  ++S L+I+P++   +
Sbjct: 641 NRGSLQPLDIPGLSRLLVQVSNLILDCPEISRLDIHPVLASGS 683


>gi|304405832|ref|ZP_07387490.1| urea carboxylase [Paenibacillus curdlanolyticus YK9]
 gi|304345075|gb|EFM10911.1| urea carboxylase [Paenibacillus curdlanolyticus YK9]
          Length = 1217

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 6   YQAKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + A+ L  K  VP+  G  +I+ +  A SA   +  P+ ++KS    GG G
Sbjct: 117 HSARELAEKAGVPMLPGTPLITELEQAVSAASVIGYPV-ILKSTAGGGGIG 166


>gi|257460269|ref|ZP_05625372.1| acetyl-CoA carboxylase, biotin carboxylase [Campylobacter gracilis
           RM3268]
 gi|257442334|gb|EEV17474.1| acetyl-CoA carboxylase, biotin carboxylase [Campylobacter gracilis
           RM3268]
          Length = 445

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK ++ +  +PV  G    I+SV  A      +  P+ +
Sbjct: 121 AKQVMMRAGIPVVPGSDGAIASVEEARKLAAEIGYPVII 159


>gi|254362063|ref|ZP_04978188.1| hypothetical protein MHA_1673 [Mannheimia haemolytica PHL213]
 gi|153093619|gb|EDN74584.1| hypothetical protein MHA_1673 [Mannheimia haemolytica PHL213]
          Length = 394

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           Q K + RK  + VA+G V      A    K L  P+ +
Sbjct: 119 QMKEVFRKTGLKVAQGRVFKDDEDARKLAKQLKFPVII 156


>gi|72161932|ref|YP_289589.1| Acetyl/propionyl-CoA carboxylase alpha subunit [Thermobifida fusca
           YX]
 gi|71915664|gb|AAZ55566.1| similar to Acetyl/propionyl-CoA carboxylase alpha subunit
           [Thermobifida fusca YX]
          Length = 1849

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 33/204 (16%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK L  +  VPVA      ++++  A +A +T+  P               G        
Sbjct: 156 AKLLAEQVGVPVAPWSRGPVTTLDEAIAAARTIGYP--------LMLKAAAGGGGRGIRI 207

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  + +    +     GS                V++E      R + + ++ D
Sbjct: 208 ITTEAELVDTYERARQEAARAFGSD--------------TVFLESLVTGARHVEVQVIAD 253

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                 A       G+    V +   + I +     L  V + D+ +  + L L      
Sbjct: 254 GQGTAWAL------GVRDCSVQRRNQKIIEESASPVLSPVQAADLKAAAERLAL--AVGY 305

Query: 186 DGGDLFPNLYKAFCDKDMSLLEIN 209
            G      LY+   DK  + LE+N
Sbjct: 306 RGAATVEFLYRP-DDKLFAFLEVN 328


>gi|330817836|ref|YP_004361541.1| hypothetical protein bgla_1g29740 [Burkholderia gladioli BSR3]
 gi|327370229|gb|AEA61585.1| hypothetical protein bgla_1g29740 [Burkholderia gladioli BSR3]
          Length = 425

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A+    +   AA + I     P+ VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTAEYETFTEAAAAHAYIDAKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  SL+     +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMSLEEAHEAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|296448759|ref|ZP_06890613.1| D-alanine/D-alanine ligase [Methylosinus trichosporium OB3b]
 gi|296253733|gb|EFH00906.1| D-alanine/D-alanine ligase [Methylosinus trichosporium OB3b]
          Length = 311

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKS 47
           AK+++    VPV KG V+S   AA++       P YV+K 
Sbjct: 104 AKSVMAAAGVPVPKGRVLSRQEAAKAHALP---PPYVLKP 140


>gi|295837598|ref|ZP_06824531.1| phosphoribosylamine-glycine ligase [Streptomyces sp. SPB74]
 gi|295826585|gb|EDY42975.2| phosphoribosylamine-glycine ligase [Streptomyces sp. SPB74]
          Length = 421

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 15/76 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++    ++A+     P YVVK    A G+             
Sbjct: 106 AKDVMAAAQVPTARAYVGTTAEEIDAALDAFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDI 83
            GV V        +  
Sbjct: 152 -GVVVTDDRAEARAHA 166


>gi|258510415|ref|YP_003183849.1| phosphoribosylamine/glycine ligase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477141|gb|ACV57460.1| phosphoribosylamine/glycine ligase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 428

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K ++ +  VP A+    S V  A + ++    P+ VVK+   A G+G
Sbjct: 113 SKRVMEEAGVPTARHRTFSDVEEARAYVRAQGAPI-VVKADGLAAGKG 159


>gi|189345747|ref|YP_001942276.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium limicola DSM
           245]
 gi|189339894|gb|ACD89297.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium limicola DSM
           245]
          Length = 447

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +    VPV  G   +++ +  A +  +    P+ ++K     GG+G     E    
Sbjct: 119 AKATMIAAGVPVVPGSQGLVTDLQEALATAEKTGYPV-IIKPTAGGGGKGMRVVHEDSQL 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            K        LK+  ++  +  G+              + VY+E   +  R + + +L D
Sbjct: 178 DKA-------LKTARNEAEQAFGN--------------SGVYIEKYLENPRHVEIQILSD 216

Query: 126 RTSGMV 131
           +    +
Sbjct: 217 QHGNTI 222


>gi|333030844|ref|ZP_08458905.1| Pyruvate carboxylase [Bacteroides coprosuis DSM 18011]
 gi|332741441|gb|EGJ71923.1| Pyruvate carboxylase [Bacteroides coprosuis DSM 18011]
          Length = 499

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK +  K NVP+  G    I ++    +  K +  P  ++K+    GGRG
Sbjct: 125 AKEIAAKGNVPMLTGSEGAIHTLEEVVTVAKKVGYP-LIIKACTGGGGRG 173


>gi|325204812|gb|ADZ00266.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M01-240355]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|323341488|ref|ZP_08081729.1| acetyl-CoA carboxylase, biotin carboxylase [Lactobacillus ruminis
           ATCC 25644]
 gi|323091099|gb|EFZ33730.1| acetyl-CoA carboxylase, biotin carboxylase [Lactobacillus ruminis
           ATCC 25644]
          Length = 459

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 109/327 (33%), Gaps = 41/327 (12%)

Query: 12  LRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           +++  VPV  G    I +V  A    + +  P+                 K        G
Sbjct: 123 MQQSGVPVIPGSEGFIDNVEEAREIAEKVGYPVL---------------LKAAAGGGGKG 167

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +R  ++ + + +   E     L            + +Y+E   + ++ + + +  D    
Sbjct: 168 IRRVNNEEELTNAYEEARREALSAFGD-------SRMYLEKIMENVKHIEVQVFRDEFGH 220

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQARIDGG 188
            V F    +    I+   +   ++    L+ P       E      D ++ +    I+  
Sbjct: 221 SVYF---PERDCSIQRNKQKMIEESPCSLVTPEQRKQLGEIAVRAVDAIDYRNTGTIEF- 276

Query: 189 DLFPNLYKA-FCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQELRDVS 246
            L    ++  F + +  +   + +  M  G  L     +++  +   +R  DI+ L    
Sbjct: 277 -LMDKNHRFYFMEMNTRIQVEHTVTEMVTGVDLVKAQVRVASGEPLPFRQEDIKLLGSAI 335

Query: 247 EEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD------VG 300
           E     I A+    +++   G I  +    G     +D     G   + + D      + 
Sbjct: 336 E---CRINAEDPAKNFMPSIGRINYLYFPVGNLGMRIDSDLYAGTEISPYYDSMIAKVIA 392

Query: 301 GGADQDKVAAAFKIITSDSSVKGILIN 327
            G D+ +     K + S+  + GI IN
Sbjct: 393 LGHDRHEAVEKVKRLLSEMIISGITIN 419


>gi|111610238|gb|ABH11616.1| pyrimidine-specific carbamoyl-phosphate synthase large chain
           [Lactobacillus helveticus CNRZ32]
          Length = 1062

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     + +V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCQKLGEPVPPSKTVKTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    +   +    +  L  + +T+     
Sbjct: 180 GI--CHNHDELAEIAKNGLELSPVTECLIEK 208


>gi|16510|emb|CAA48891.1| succinate--CoA ligase (GDP-forming) [Arabidopsis thaliana]
          Length = 345

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 45/141 (31%), Gaps = 14/141 (9%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA-DQDKVAAAFKIITSDSS 320
           YI   G IG +     L    +      G   +  + +GG   +        +    D  
Sbjct: 190 YIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQ 249

Query: 321 VKGI-LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE----SG 375
            +GI LI   GG    D         +KE   + P+V  + G     G R+       SG
Sbjct: 250 TEGIVLIGEIGGTAEEDAAAL-----IKENGTDKPVVAFIAGLTAPPGRRMGHAGRIVSG 304

Query: 376 LNVITAI---DLDDAAQKIVH 393
                      L DA  K+V 
Sbjct: 305 GKGTAQDKIKSLRDAGVKVVE 325


>gi|15600048|ref|NP_253542.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa PAO1]
 gi|218893949|ref|YP_002442818.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa LESB58]
 gi|254244247|ref|ZP_04937569.1| phosphoribosylamine-glycine ligase [Pseudomonas aeruginosa 2192]
 gi|20139739|sp|Q9HUV8|PUR2_PSEAE RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|9951127|gb|AAG08240.1|AE004899_1 phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa PAO1]
 gi|126197625|gb|EAZ61688.1| phosphoribosylamine-glycine ligase [Pseudomonas aeruginosa 2192]
 gi|218774177|emb|CAW29994.1| phosphoribosylamine--glycine ligase [Pseudomonas aeruginosa LESB58]
          Length = 429

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + +     P+ V+K+   A G+              
Sbjct: 108 KDFLARHRIPTAAYRNFTEVEPALAYLHEQGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMNLDEAEAAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGQN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|327192807|gb|EGE59734.1| phosphoribosylamine-glycine ligase protein [Rhizobium etli
           CNPAF512]
          Length = 423

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 24/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  +Y +P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDICARYGIPTGAYQRFNNAPKAKAYIRAQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   ++ + +           G  G+ V    VE   D     +   L D  +
Sbjct: 152 GVTVAMTLDEALAAVDDCF-----EGAFGAAGAEV---VVEAYLDGEEASFFC-LCDGKN 202

Query: 129 GMVAFIA 135
            +    A
Sbjct: 203 ALPLATA 209


>gi|325206768|gb|ADZ02221.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M04-240196]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|325127537|gb|EGC50462.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           N1568]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|308389954|gb|ADO32274.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           alpha710]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|307265219|ref|ZP_07546778.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919841|gb|EFN50056.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 447

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 7/136 (5%)

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
            ++ K  +  Y  +   + C     GL M    ++       A    +G GA+   + A 
Sbjct: 55  NLKDKIGDFVYSEM---LACSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIKLITAG 111

Query: 312 FKIITSDSSVKGILINIF---GGIMRCD-VLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
               T    +K I  NI    GG+   D          + E+K+N+P++      N +  
Sbjct: 112 KLRRTDLEKIKQIKSNIILLAGGVDYGDRETALYNGEKLAELKLNVPVIYAGNIENREEI 171

Query: 368 NRLIAESGLNVITAID 383
           + +  E+G  V    +
Sbjct: 172 SYIFQEAGQEVYIVDN 187


>gi|302392285|ref|YP_003828105.1| carbamoyl-phosphate synthase large subunit [Acetohalobium
           arabaticum DSM 5501]
 gi|302204362|gb|ADL13040.1| carbamoyl-phosphate synthase large subunit [Acetohalobium
           arabaticum DSM 5501]
          Length = 1067

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 66/210 (31%), Gaps = 41/210 (19%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + +   PVA+  +I ++  A+  +  +  P+ +  +    G                G  
Sbjct: 136 MEEIGQPVAESQIIDTLAEAKEFVAEIGFPVIIRPAYTMGG---------------AGGG 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +  + + +   +   L ++            ++ V +E      +E+   +L D     +
Sbjct: 181 IADNSQELEDIVSRGLNNS-----------PISQVLIEKSIAGWKEIEYEVLRDGADNCI 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQARIDG 187
                     +I+ V       I       L  +  + +      +   L ++G   +  
Sbjct: 230 VI----CNMENIDPVGIHTGDSIVVAPSQTLADLEYQMLRSASLEIIKELGIEGGCNVQF 285

Query: 188 GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                +L       D  ++E+NP +   + 
Sbjct: 286 ALHPDSL-------DYYVIEVNPRVSRSSA 308


>gi|302834651|ref|XP_002948888.1| hypothetical protein VOLCADRAFT_89214 [Volvox carteri f.
           nagariensis]
 gi|300266079|gb|EFJ50268.1| hypothetical protein VOLCADRAFT_89214 [Volvox carteri f.
           nagariensis]
          Length = 572

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 24/208 (11%)

Query: 9   KALLRKYNVPVAK-GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           + ++ +  +P  K   V+S    A++A     G   V+K    A   G  R        K
Sbjct: 252 REIMARAGLPTPKHYKVVSEADVAKAAAHV--GFPAVIKPISGAASIGVIRANNEEDLLK 309

Query: 68  GGVRVESSLKSVISDIREIL-GSTLITKQTGPTGSRVN-CVYVEDGADILRELYLSLLVD 125
              +V+  +         ++ G    +   G  G  ++  + VE+  D   E+   L+ D
Sbjct: 310 AFRKVQHDMSRARIVAGALVEGDDEGSDAAGNAGGWIHLELMVEEYLD-GHEVDCDLIFD 368

Query: 126 RTSGMVAFIASTQGGMDIE----EVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQG 181
             +G   + A T     +E    E   + P  + K     L+ ++   V SL   L +  
Sbjct: 369 --NGRPVYGAITDNWPTVEPYFNETGSNCPSVLPKAHQIELLELSVRAVQSLGFKLGVFH 426

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEIN 209
                           +  +   L+E+N
Sbjct: 427 VECK------------YTSRGARLIEVN 442


>gi|261393196|emb|CAX50815.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
           synthetase ammonia chain) [Neisseria meningitidis 8013]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|268593007|ref|ZP_06127228.1| phosphoribosylamine--glycine ligase [Providencia rettgeri DSM 1131]
 gi|291311480|gb|EFE51933.1| phosphoribosylamine--glycine ligase [Providencia rettgeri DSM 1131]
          Length = 427

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P A     + +  A + +  +  P+ V+K+   A G+              
Sbjct: 109 KDFLARHHIPTAAYENFTDIEPALAYLDKVGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     + ++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAKEAVHDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VIPM 209


>gi|161508239|ref|YP_001577721.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           helveticus DPC 4571]
 gi|172048328|sp|A8YVZ3|CARB_LACH4 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|160349228|gb|ABX27902.1| Carbamoyl-phosphate synthase, large subunit [Lactobacillus
           helveticus DPC 4571]
          Length = 1062

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     + +V  A +    +  P+ V  +                  + G
Sbjct: 133 KELCQKLGEPVPPSKTVKTVEDALAFGDEIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    +   +    +  L  + +T+     
Sbjct: 180 GI--CHNHDELAEIAKNGLELSPVTECLIEK 208


>gi|84496656|ref|ZP_00995510.1| carbamoylphosphate synthetase large chain [Janibacter sp. HTCC2649]
 gi|84383424|gb|EAP99305.1| carbamoylphosphate synthetase large chain [Janibacter sp. HTCC2649]
          Length = 1105

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K     S   A +  + +  P+ V  S +  GGRG
Sbjct: 680 RVLAEAKLPAPKHGTAYSASEALAVARDIGYPVLVRPSYVL-GGRG 724


>gi|329667282|gb|AEB93230.1| carbamoylphosphate synthase large subunit [Lactobacillus johnsonii
           DPC 6026]
          Length = 1062

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L ++   PV     +++V  A      +  P+ V  +                  + G
Sbjct: 133 KELCKELGEPVPPSTTVNTVEEALEFGDRIGYPIIVRPA-------------FTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+   ++ + +    +  L  + +T+     
Sbjct: 180 GI--CNNHEELAKIAKNGLELSPVTECLIEK 208


>gi|331700753|ref|YP_004397712.1| phosphoribosylamine--glycine ligase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128096|gb|AEB72649.1| Phosphoribosylamine--glycine ligase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 410

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + + N+P A+    ++   AE   ++L  P  VVK    A G+G           K
Sbjct: 108 AKGFMARNNIPTAQFKTFTTFDDAEKYAESLSLP-LVVKENGLAAGKG-------VTIVK 159

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQT 96
               + ++++  +    EIL    +  + 
Sbjct: 160 DSADLAATIQHALDKAGEILIEEFLEGEE 188


>gi|308178295|ref|YP_003917701.1| phosphoribosylamine--glycine ligase [Arthrobacter arilaitensis
           Re117]
 gi|307745758|emb|CBT76730.1| phosphoribosylamine--glycine ligase [Arthrobacter arilaitensis
           Re117]
          Length = 428

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 18/106 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V ++   A SA+     P YVVK    A G+             
Sbjct: 106 AKNVMAAAEVPTAMAHVATNREEAASALDDFGAP-YVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDG 111
            GV V +     +   +     G T++ ++    G  V+   + DG
Sbjct: 152 -GVVVTTDRDEALEHAQACFDAGGTVVIEEFL-DGPEVSLFVICDG 195


>gi|261417317|ref|YP_003251000.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261373773|gb|ACX76518.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302326908|gb|ADL26109.1| carbamoyl-phosphate synthase, large subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 1087

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 60/202 (29%), Gaps = 36/202 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ K  +  A+  +  +V  A + +  +  P+ V  S +  GGRG             
Sbjct: 688 KQLVTKIGIKQAESGIAHNVEEALAIVDKIGYPVLVRPSFVL-GGRGM------------ 734

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                     VI    + L   +        G     + ++   +   EL +  + D   
Sbjct: 735 ----------VIVYKEKYLRKFVEEAAAIGEGKP---ILIDRFLEDATELDVDCISDGKH 781

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGG 188
            ++  I        I             L  +    V           L + G       
Sbjct: 782 TVIGAIMEHVEPAGIHSGDSASVIPPMTLSKEIQDKVREF-AKEFAKELHVVG------- 833

Query: 189 DLFPNLYKAFCDKDMSLLEINP 210
               N+  A  D ++ ++E+NP
Sbjct: 834 --LMNMQLAVKDGELYMIEVNP 853


>gi|256392939|ref|YP_003114503.1| carbamoyl-phosphate synthase L chain ATP- binding [Catenulispora
           acidiphila DSM 44928]
 gi|256359165|gb|ACU72662.1| Carbamoyl-phosphate synthase L chain ATP- binding [Catenulispora
           acidiphila DSM 44928]
          Length = 662

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF---KEL 62
           A+ L+ +  VPV  G      S+       + +  P+ ++K     GG+G         L
Sbjct: 119 ARTLMAQAGVPVLPGSSQATDSLAVLAQDAERIGYPV-ILKPVAGGGGKGMAVVAAADAL 177

Query: 63  PADSKGGVRVESSL 76
           P   +  VR+  S 
Sbjct: 178 PGAVEQAVRIGRSA 191


>gi|188996965|ref|YP_001931216.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932032|gb|ACD66662.1| Carbamoyl-phosphate synthase L chain ATP-binding
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 476

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  +R+  VP+  G    IS +  A+     +  P+ ++K+    GGRG
Sbjct: 121 AKKKMRELGVPILPGSDEPISDMKKAKEIANEIGYPV-ILKAAYGGGGRG 169


>gi|168818849|ref|ZP_02830849.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205344043|gb|EDZ30807.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320084804|emb|CBY94594.1| Protein fdrA [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 554

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 85/268 (31%), Gaps = 51/268 (19%)

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINP 210
            I    +D   G+T   V  L + L    Q    G     +L +   +      L E N 
Sbjct: 67  AIRTEAVD--DGITQVIVRQLEEAL----QQLAQGSSGSQSLIQVRRWESACQKLPEANL 120

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD---VSEEDSREIEAKQHN-------- 259
            ++   G      +     + AL R L++    D   + +E   +  A+           
Sbjct: 121 ALVSVAGEYAAELA-----EQALDRSLNVMIFSDNVTLDDEIRLKRRARDKGLLVMGPDC 175

Query: 260 -----------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGA 303
                       + +  +GNIG +             I L G    + +     D+    
Sbjct: 176 GTAMIANTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEV 235

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                  A  I+++D   +   +  F      D + + I+SA+K      P+V    G +
Sbjct: 236 GGISALTALDILSADEKSQ---VLAFVSKPPADAVRQHIISAMKATG--KPVVALFLGFS 290

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKI 391
             +          NV  A  LD+AA+  
Sbjct: 291 SPVARE------ENVWFASTLDEAARLA 312


>gi|164686618|ref|ZP_02210646.1| hypothetical protein CLOBAR_00211 [Clostridium bartlettii DSM
           16795]
 gi|164604347|gb|EDQ97812.1| hypothetical protein CLOBAR_00211 [Clostridium bartlettii DSM
           16795]
          Length = 1068

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K N+   KG+ + S          +  P+ V  S +  G
Sbjct: 675 ELLEKLNINRPKGIAVWSTEEGVKHASEIGYPVLVRPSYVLGG 717


>gi|323466240|gb|ADX69927.1| Carbamoyl-phosphate synthase, large subunit [Lactobacillus
           helveticus H10]
          Length = 1062

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 15/91 (16%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +K   PV     + +V  A +    +  P+ V             R       + G
Sbjct: 133 KELCQKLGEPVPPSKTVKTVEDALAFGDEIGYPIIV-------------RPAFTMGGTGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPT 99
           G+    +   +    +  L  + +T+     
Sbjct: 180 GI--CHNHDELAEIAKNGLELSPVTECLIEK 208


>gi|260427594|ref|ZP_05781573.1| methylcrotonoyl-CoA carboxylase subunit alpha [Citreicella sp.
           SE45]
 gi|260422086|gb|EEX15337.1| methylcrotonoyl-CoA carboxylase subunit alpha [Citreicella sp.
           SE45]
          Length = 666

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 58/205 (28%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K + ++  V    G   +I     A      +  P+ +  S                  
Sbjct: 119 SKKIAQEAGVNTVPGYMGLIEDADEAVKISGEIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  + +      +        +          + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWNDQEAREGFQSSKNEAASSFGD-------DRIFIEKFVTQPRHIEIQVLCD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                +      +    I+   +   ++     +DP       E   +L   +       
Sbjct: 217 AHGNGLWL---NERECSIQRRNQKVVEEAPSPFLDPETRKAMGEQAVALAKAVGYTSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++   +         +K+   LE+N
Sbjct: 274 VEF--IVDG------EKNFYFLEMN 290


>gi|262202268|ref|YP_003273476.1| carbamoyl-phosphate synthase large subunit [Gordonia bronchialis
           DSM 43247]
 gi|262085615|gb|ACY21583.1| carbamoyl-phosphate synthase, large subunit [Gordonia bronchialis
           DSM 43247]
          Length = 1110

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L    +P       +S   A      +  P+ V  S +  GGRG
Sbjct: 694 KVLTAAGLPAPAFGTATSFDEARDTAARIGYPVLVRPSYVL-GGRG 738


>gi|223937622|ref|ZP_03629525.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [bacterium
           Ellin514]
 gi|223893785|gb|EEF60243.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [bacterium
           Ellin514]
          Length = 401

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 1/102 (0%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L K  +P+ K   +S  +    A K    PL + K +    G+G    +      + 
Sbjct: 126 KQALEKAGLPLPKFKAVSEKNEILEAAKEFGWPLVLKKRRNGYDGKGNFTLRATTDVDEA 185

Query: 69  GVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVE 109
             ++      +  +        L I      TG   N   VE
Sbjct: 186 WRQLGGDSNGLYVEAFCPFTMELAIMITRSQTGEMANYPLVE 227


>gi|14521839|ref|NP_127315.1| phosphoribosylglycinamide formyltransferase 2 [Pyrococcus abyssi
           GE5]
 gi|74581625|sp|Q9UY67|PURT_PYRAB RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|5459059|emb|CAB50545.1| purT phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
           (GART 2) (GAR transformylase 2)
           (5'-phosphoribosylglycinamide transformylase 2)
           (formate-dependent GAR transformylase) [Pyrococcus
           abyssi GE5]
          Length = 429

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 24/108 (22%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  VP ++ +  +++     A + +  P +  K+ + + G+G   F + P D     
Sbjct: 125 LVKEAKVPTSRYMYATTLDELYEACEKIGYPCH-TKAIMSSSGKG-SYFVKGPED----- 177

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            +  + +   +  R                     + VE+  D   E+
Sbjct: 178 -IPKAWEEAKTKAR----------------GSAEKIIVEEHIDFDVEI 208


>gi|325845214|ref|ZP_08168521.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Turicibacter
           sp. HGF1]
 gi|325488758|gb|EGC91160.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Turicibacter
           sp. HGF1]
          Length = 450

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+ ++   NVPV  G   +I S+   +   K +  P+ V K+    GGRG
Sbjct: 119 AREMMIAANVPVVPGSDGLIESIEQGKRVAKEIGYPVLV-KASAGGGGRG 167


>gi|320537561|ref|ZP_08037499.1| phosphoribosylamine--glycine ligase [Treponema phagedenis F0421]
 gi|320145563|gb|EFW37241.1| phosphoribosylamine--glycine ligase [Treponema phagedenis F0421]
          Length = 416

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 80/228 (35%), Gaps = 37/228 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++KY +P A      S   A + ++    P+ V+K+     G+             
Sbjct: 106 AKAFMKKYCIPTANWDTAYSFEQAAALVENYSFPV-VIKADGLCAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S ++ +      L S  I K  G  G     V +E+    +    L ++    
Sbjct: 152 -GVFICESKEAALGT----LDSIFIKKIFGDEGK---KVILEEFLQGIEASQLCVVSKNN 203

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIF--KLLIDPLIGVTSEDVASLCDML-----ELQ 180
                 I   +   D +++ ++           I P   VT+E    + ++L      L 
Sbjct: 204 ------IFPLETARDYKKIGENDTGLNTGGVGCISPNPAVTNEVQKKISEILQKISAGLT 257

Query: 181 GQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
            +     G LF        +KD+ +LE N        ++ +L  K   
Sbjct: 258 AEKMNYTGILFIGF--MIQEKDIRVLEFNVRFGDPETQVLMLRLKSDL 303


>gi|293374585|ref|ZP_06620902.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Turicibacter
           sanguinis PC909]
 gi|292646787|gb|EFF64780.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Turicibacter
           sanguinis PC909]
          Length = 450

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           A+ ++   NVPV  G   +I S+   +   K +  P+ V K+    GGRG
Sbjct: 119 AREMMIAANVPVVPGSDGLIESIEQGKRVAKEIGYPVLV-KASAGGGGRG 167


>gi|293394747|ref|ZP_06639038.1| GNAT family acetyltransferase [Serratia odorifera DSM 4582]
 gi|291422698|gb|EFE95936.1| GNAT family acetyltransferase [Serratia odorifera DSM 4582]
          Length = 883

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 53/147 (36%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A    + +  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILQAYGLSTLPTWIAGDSAEAVHIAEQIGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      IL     T        R++ + V+  A+    +EL
Sbjct: 530 PHKSEVQGVMLYLRTAVEVQRAADAILDRVKRTYPQA----RIHGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +++  D   G +  +   +GG++  +
Sbjct: 586 RIAVEQDPIFGPLIMLG--EGGLEWRQ 610


>gi|288961680|ref|YP_003451990.1| phosphoribosylglycinamide formyltransferase 2 [Azospirillum sp.
           B510]
 gi|288913960|dbj|BAI75446.1| phosphoribosylglycinamide formyltransferase 2 [Azospirillum sp.
           B510]
          Length = 389

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 42/187 (22%)

Query: 1   MN---IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG 57
           MN   I E  A  L     +  ++     S+    +       P  V+K  + + G+G+ 
Sbjct: 103 MNRDRIREVAATEL----GLRTSRYRYAESLEEVRAGADHTGFPC-VIKPVMSSSGKGQS 157

Query: 58  RFKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRE 117
             ++       G+            +  + G                 V VE+      E
Sbjct: 158 TVRDA-----AGLEAAWDY-----AVANMRGDR-------------RKVIVEEFVPFDYE 194

Query: 118 LYLSLLVDRTSGMVAF---IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
             ++LL  RT   + +   I   Q   D +E  +  P  + + ++D          A + 
Sbjct: 195 --ITLLTVRTRDGILYCEPIGHRQERGDYQESWQ--PVAMPQAMLDDAK----AMAARVV 246

Query: 175 DMLELQG 181
           D L   G
Sbjct: 247 DNLGGYG 253


>gi|297566436|ref|YP_003685408.1| acetyl-CoA carboxylase, biotin carboxylase [Meiothermus silvanus
           DSM 9946]
 gi|296850885|gb|ADH63900.1| acetyl-CoA carboxylase, biotin carboxylase [Meiothermus silvanus
           DSM 9946]
          Length = 446

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 9/86 (10%)

Query: 13  RKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           R+  VP   G   +  V  A+ A   +  P+ ++K+    GGRG     +          
Sbjct: 124 REAGVPTTPGTDELEDVETAKKAAAEIGYPV-ILKATAGGGGRGMRLVSDES-------E 175

Query: 72  VESSLKSVISDIREILGSTLITKQTG 97
           +E +++    + R   G+  +  +  
Sbjct: 176 LERAVQQAQEEARAAFGNPTVYLEKY 201


>gi|157736856|ref|YP_001489539.1| acetyl CoA carboxylase, biotin carboxylase subunit [Arcobacter
           butzleri RM4018]
 gi|315636024|ref|ZP_07891283.1| acetyl-CoA carboxylase, biotin carboxylase [Arcobacter butzleri
           JV22]
 gi|157698710|gb|ABV66870.1| acetyl CoA carboxylase, biotin carboxylase subunit [Arcobacter
           butzleri RM4018]
 gi|315479680|gb|EFU70354.1| acetyl-CoA carboxylase, biotin carboxylase [Arcobacter butzleri
           JV22]
          Length = 483

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           +K  ++K  VPV +G    I  +       K +  P+ ++K+    GGRG    +E
Sbjct: 120 SKVAMKKVGVPVLEGTDEPIIDIEEGAKIAKQIGFPV-IIKAAFGGGGRGMRIVRE 174


>gi|149247902|ref|XP_001528338.1| phosphoribosylformylglycinamidine cyclo-ligase [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448292|gb|EDK42680.1| phosphoribosylformylglycinamidine cyclo-ligase [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 796

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++K+N+P A+    ++V  A+  I+ +   + V+K+   A G+             
Sbjct: 113 SKDFMKKHNIPTARYQNFTNVEDAKKHIEQVDYKI-VLKADGIAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV +  + +  +  + EI    ++ K  G  G   + + +E+  +      LS+L 
Sbjct: 159 -GVLIPETKEEALKGLNEI----MVDKNFGDAG---DEIVIEEYLEGDE---LSILT 204


>gi|126337501|ref|XP_001376722.1| PREDICTED: similar to propionyl-CoA carboxylase alpha subunit
           [Monodelphis domestica]
          Length = 728

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHVEIQVLC 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   ++     
Sbjct: 277 DKKGNALWL---NERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSRKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|114650518|ref|XP_001148157.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           isoform 3 [Pan troglodytes]
          Length = 681

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|73661872|ref|YP_300653.1| ribulokinase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
 gi|82592623|sp|Q49ZR6|ARAB1_STAS1 RecName: Full=Ribulokinase 1
 gi|72494387|dbj|BAE17708.1| putative L-ribulokinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 538

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 21/135 (15%)

Query: 20  AKGVVISSVHAAESA-------IKTLPGPLYVVKSQI-----HAGGRGKGRFKELPADSK 67
            K  V      AE         ++ L   + + K  +     H G R      +L     
Sbjct: 341 PKSYV----DQAEKQGLSILGYLEKLAADISIDKQHVTVLDWHNGNRSILSDSKLTGSIF 396

Query: 68  GGVRVESSLKSVISDI---REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           G      +   +I          G+ +I +Q       V  VY   G  I  EL + +  
Sbjct: 397 GLTL--QTPFEMIHKAYLESTAFGTKMIMQQFENNHIPVETVYAAGGIPIKSELLVDIYA 454

Query: 125 DRTSGMVAFIASTQG 139
           +  +  V  I S+  
Sbjct: 455 NVLNKEVVVIDSSNA 469


>gi|301300421|ref|ZP_07206622.1| phosphoribosylamine--glycine ligase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851964|gb|EFK79647.1| phosphoribosylamine--glycine ligase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 418

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 28/128 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A   + KY++P AK    ++   A + +K    P+ +               KE    + 
Sbjct: 111 AMEFMDKYHIPTAKFKTYTTSDEAIAGLKEFDEPVVI---------------KEDGLAAG 155

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S +    +IR +             G +   V +E+      E  + L++   
Sbjct: 156 KGVVIAQSYQEAEDEIRLMFR----------KGQK--KVVLEEFL-AGNEYSMFLVLSDK 202

Query: 128 SGMVAFIA 135
              +  +A
Sbjct: 203 GYRILPMA 210


>gi|256372710|ref|YP_003110534.1| phosphoribosylamine/glycine ligase [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009294|gb|ACU54861.1| phosphoribosylamine/glycine ligase [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 408

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           K L     VP A+  V +++  A +       P YV+K+   A G+G
Sbjct: 95  KRLCDAAGVPTARWGVATTIEEAAALFDRFG-PPYVIKTDGLAAGKG 140


>gi|229168686|ref|ZP_04296408.1| Pyruvate carboxylase [Bacillus cereus AH621]
 gi|228614842|gb|EEK71945.1| Pyruvate carboxylase [Bacillus cereus AH621]
          Length = 1148

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 64/201 (31%), Gaps = 35/201 (17%)

Query: 17  VPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVES 74
           +P+  G    ++S+   E   +    P+ ++K+ +  GGRG           +    +  
Sbjct: 134 IPIIPGSDGPVNSIEEVEEFAEKYDYPI-IIKASLGGGGRGM-------RIVRASEELRE 185

Query: 75  SLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFI 134
           S     S+ +   G+                VYVE   +  + + + +L D    +V   
Sbjct: 186 SYNRAKSEAKAAFGND--------------EVYVEKFVEKPKHIEVQILADEEGNVVHLY 231

Query: 135 ASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNL 194
              +    ++   +   +    + +    G+      +   + +          +     
Sbjct: 232 ---ERDCSVQRRHQKVVEIAPSVSL--SDGLRQRICDAAVKLTKNVNYLNAGTVEFLVK- 285

Query: 195 YKAFCDKDMSLLEINPLIIMK 215
                  +   +E+NP + ++
Sbjct: 286 -----GDEFYFIEVNPRVQVE 301


>gi|190894441|ref|YP_001984734.1| putative urea amidolyase [Rhizobium etli CIAT 652]
 gi|190700102|gb|ACE94184.1| putative urea amidolyase protein [Rhizobium etli CIAT 652]
          Length = 1179

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 78/224 (34%), Gaps = 37/224 (16%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+ L +   VP+  G  ++S    A SA + +  P+ ++KS    GG G     +  +  
Sbjct: 119 ARELAKASGVPLLPGSGLLSGADEALSAAEAIGYPV-MLKSTAGGGGIGMQLCADPES-- 175

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
                +++S +SV    R   G                 VY+E      R + + +  D 
Sbjct: 176 -----LKASFESVQRTARASFGDA--------------RVYIERFVADARHVEVQIFGDG 216

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARI 185
                  IA  +    ++   +   ++       P  G+++     L     +L      
Sbjct: 217 RGN---VIALGERDCSLQRRNQKVVEET------PAPGLSAATRGRLHKAAVDLGASVSY 267

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
           +       +Y    + +   LE+N  + +++    V ++    D
Sbjct: 268 ESAGTVEFIYDPLRE-EFYFLEVNTRLQVEHP---VTEAVFGID 307


>gi|172045746|sp|Q8G5B0|PURT_BIFLO RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
          Length = 399

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 112 GLPTTPYRFAGSLEELRAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 159

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 160 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 209

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 210 PIGQRQESGDYRESWQPATE 229


>gi|158335279|ref|YP_001516451.1| acetyl-CoA carboxylase biotin carboxylase subunit [Acaryochloris
           marina MBIC11017]
 gi|158305520|gb|ABW27137.1| acetyl-CoA carboxylase, biotin carboxylase [Acaryochloris marina
           MBIC11017]
          Length = 449

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAA--ESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++K  VP   G        A  +     +  P+ V K+    GGRG    +E    
Sbjct: 120 AKETMQKAGVPTVPGSDGLVPDEATAKKIADDMGYPVMV-KATAGGGGRGMRLVREPENL 178

Query: 66  SK 67
            K
Sbjct: 179 GK 180


>gi|241663581|ref|YP_002981941.1| phosphoribosylamine--glycine ligase [Ralstonia pickettii 12D]
 gi|240865608|gb|ACS63269.1| phosphoribosylamine/glycine ligase [Ralstonia pickettii 12D]
          Length = 422

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P AK         A + +     P+ V+K+   A G+             
Sbjct: 106 AKAFMHRHGIPTAKYQTFGDAAQAHAYVDQEGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  + +   S     +   L   + G  G+RV    +E+      E    ++ D  
Sbjct: 152 -GVVVAMTAEEAHSA----IDMMLADNRLGDAGARV---VIEEFL-AGEEASFIVVCDGK 202

Query: 128 SGMVAFIASTQG 139
           +  V  +A++Q 
Sbjct: 203 N--VVALATSQD 212


>gi|329946170|ref|ZP_08293783.1| phosphoribosylamine--glycine ligase [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328527768|gb|EGF54759.1| phosphoribosylamine--glycine ligase [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 423

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A+  V ++     SA+     P YVVK    A G+G     E P    
Sbjct: 106 AKEVMAAAGVPTAEAAVCATEAELTSALDRFGAP-YVVKEDGLAAGKGVVVTDERPVAMA 164

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
            G R   +       + + L     +      G+ V  +      D  R
Sbjct: 165 HG-RACLTRGGGRVVVEDYLDGPEASLFCVCDGATVRPL--APAQDFKR 210


>gi|289423681|ref|ZP_06425480.1| carbamoyl-phosphate synthase, large subunit [Peptostreptococcus
           anaerobius 653-L]
 gi|289155931|gb|EFD04597.1| carbamoyl-phosphate synthase, large subunit [Peptostreptococcus
           anaerobius 653-L]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 12/105 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL K N+   KG  + SV         L  P+ V  S +  G   +  + E        
Sbjct: 675 ELLEKLNINRPKGKGVWSVAEGVEVATKLGYPVLVRPSYVLGGQGMEITYDE-------- 726

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
            R+   L+      R+ +   LI      TG  +    + DG DI
Sbjct: 727 TRLVQYLEDAFE--RDAINPVLI--DKYLTGREIEVDAICDGKDI 767


>gi|259505855|ref|ZP_05748757.1| phosphoribosylglycinamide formyltransferase 2 [Corynebacterium
           efficiens YS-314]
 gi|259166529|gb|EEW51083.1| phosphoribosylglycinamide formyltransferase 2 [Corynebacterium
           efficiens YS-314]
          Length = 413

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 24/105 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +     S+     +A + L  P  VVK  + + G+G+             V     
Sbjct: 141 GLPTSGYEFCSTFEEFTAAAERLGYP-NVVKPVMSSSGKGQSV-----------VTSAED 188

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           L+S       + G+ +              V VE   +   E+ L
Sbjct: 189 LESAWEYA--MSGARVSN----------QRVIVEQFVEFDYEITL 221


>gi|254672417|emb|CBA05752.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
           alpha275]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|226356015|ref|YP_002785755.1| phosphoribosylamine--glycine ligase [Deinococcus deserti VCD115]
 gi|226318005|gb|ACO46001.1| putative phosphoribosylamine--glycine ligase (Glycinamide
           ribonucleotide synthetase) (phosphoribosylglycinamide
           synthetase) [Deinococcus deserti VCD115]
          Length = 416

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +KA + ++ +P A+ +   ++  A + ++ L  P+ V               K+    + 
Sbjct: 103 SKAFMARHGIPTAQHLTFDNLEDALAHVRGLRTPIVV---------------KDAGLKAG 147

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV +  S +   + +R+I 
Sbjct: 148 KGVTIAHSHEEAGAALRDIF 167


>gi|78044884|ref|YP_359765.1| acetyl-CoA carboxylase, biotin carboxylase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996999|gb|ABB15898.1| acetyl-CoA carboxylase, biotin carboxylase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 517

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 14/104 (13%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ +++K  VPV  G    I     A      +  P+ V  +                  
Sbjct: 116 AREIMKKAGVPVIPGSDGEIDDFREALKVADEIGYPVIVKAA------------GGGGGR 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVE 109
               V     L+  I        ST    +        +C +VE
Sbjct: 164 GMRIVHTPKELEEAIQSAAREAASTFGNSKLYLEKYLQDCRHVE 207


>gi|41017318|sp|Q7SI95|LYSX_SULSO RecName: Full=Alpha-aminoadipate--lysW ligase lysX; Short=AAA--lysW
           ligase lysX
 gi|22212908|tpg|DAA00053.1| TPA_exp: LysX [Sulfolobus solfataricus]
          Length = 275

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L ++N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 87  ILARHNIPTPKTFIAFDKTNAIEYSKKLGYPV-VIKPVEGSWGRMVAKADNL 137


>gi|325927513|ref|ZP_08188751.1| acyl-CoA synthetase (NDP forming) [Xanthomonas perforans 91-118]
 gi|325542106|gb|EGD13610.1| acyl-CoA synthetase (NDP forming) [Xanthomonas perforans 91-118]
          Length = 902

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 15/222 (6%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +PV    V ++ + A      L      V  ++ +            +D  G 
Sbjct: 497 RLLAAYGIPVVPLQVAATANEAALLADPLLAVGRTVTLKVLSSE------IAHKSDVDGV 550

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDRT 127
               SS+ +V      IL               +  V V+        REL   +  D  
Sbjct: 551 RLNLSSVAAVREAATGILARARAAHPHA----VIEGVIVQPTVLRPKARELIAGIADDPV 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDG 187
            G           +++    +     +   L   LIG T      L    ++        
Sbjct: 607 FGPAIVFGRGGAAVEVINDRELALPPLDLRLAHELIGRT-RVSRILKAYRDVPAADERAV 665

Query: 188 GDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
             +   L +   D  +++ L+INPL+  ++G +  LD++++ 
Sbjct: 666 ALVLVKLAQLAADIPEITELDINPLLADRDG-VIALDARVAV 706


>gi|295098776|emb|CBK87865.1| phosphoribosylamine--glycine ligase [Eubacterium cylindroides
           T2-87]
          Length = 411

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 15/77 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY++P A      +   A   +++   P+ +               KE    + 
Sbjct: 106 AKQIMAKYDIPTAAYQTFDNYEEAWKYVESKGAPIVI---------------KEDGLKAG 150

Query: 68  GGVRVESSLKSVISDIR 84
            GV V   L      ++
Sbjct: 151 KGVTVAMDLDQANEALK 167


>gi|194099802|ref|YP_002002937.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae
           NCCP11945]
 gi|239999975|ref|ZP_04719899.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae 35/02]
 gi|240013076|ref|ZP_04719989.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae DGI18]
 gi|240017645|ref|ZP_04724185.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae FA6140]
 gi|240081875|ref|ZP_04726418.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae FA19]
 gi|240114152|ref|ZP_04728642.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae MS11]
 gi|240116792|ref|ZP_04730854.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae PID18]
 gi|240119019|ref|ZP_04733081.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae PID1]
 gi|240122266|ref|ZP_04735228.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae PID24-1]
 gi|240122443|ref|ZP_04735399.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae PID332]
 gi|240126707|ref|ZP_04739593.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae
           SK-92-679]
 gi|240127156|ref|ZP_04739817.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|254493455|ref|ZP_05106626.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae 1291]
 gi|260441584|ref|ZP_05795400.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae DGI2]
 gi|268595782|ref|ZP_06129949.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae 35/02]
 gi|268597972|ref|ZP_06132139.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae FA19]
 gi|268600227|ref|ZP_06134394.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae MS11]
 gi|268602467|ref|ZP_06136634.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae PID18]
 gi|268604734|ref|ZP_06138901.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae PID1]
 gi|268681031|ref|ZP_06147893.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae PID332]
 gi|268685288|ref|ZP_06152150.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268685512|ref|ZP_06152374.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291044954|ref|ZP_06570663.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae DGI2]
 gi|193935092|gb|ACF30916.1| putative phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512495|gb|EEH61840.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae 1291]
 gi|268549171|gb|EEZ44589.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae 35/02]
 gi|268551760|gb|EEZ46779.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae FA19]
 gi|268584358|gb|EEZ49034.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae MS11]
 gi|268586598|gb|EEZ51274.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae PID18]
 gi|268588865|gb|EEZ53541.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae PID1]
 gi|268621315|gb|EEZ53715.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae PID332]
 gi|268625572|gb|EEZ57972.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268625796|gb|EEZ58196.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291011848|gb|EFE03844.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae DGI2]
 gi|317165271|gb|ADV08812.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 423

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+     G+             
Sbjct: 106 AKAFMVKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLVAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G     V +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAG---ERVVIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 HVLPM 207


>gi|118474020|ref|YP_888358.1| CoA-binding protein [Mycobacterium smegmatis str. MC2 155]
 gi|118175307|gb|ABK76203.1| CoA-binding protein [Mycobacterium smegmatis str. MC2 155]
          Length = 687

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 84/231 (36%), Gaps = 35/231 (15%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
            A+ L R   V   +  ++S    A +A ++L  P+ V           K       +D 
Sbjct: 481 DARELFRAAGVTFPEAKLVSDAAQARAAAESLGYPVVV-----------KAMGLLHKSDV 529

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR--ELYLSLLV 124
            G     S   +V   +  +        +  P G       VE  AD+    E+ + +  
Sbjct: 530 GGVALGLSDPHAVAEAVEGM------RHRLNPPG-----FCVEAMADLNSGVEIIVGVQR 578

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-VTSEDVASLCDMLELQGQA 183
           D   G VA +    GG+  E +A           +D        E + +      L+G+A
Sbjct: 579 DPRFGPVAMVG--LGGVYTEVLADV---AFALAPVDSGAARALLESLRASALFTGLRGRA 633

Query: 184 RIDGGDLFPNLYK----AFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDD 230
            +D       +      A    +++ LEINPL++  +  L  LD++I  D+
Sbjct: 634 PVDLDAAARAIAAITEVAVTHPEITELEINPLLLTPDHALG-LDARIVLDN 683


>gi|115628|sp|P13258|CARB_METBA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
          Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|149817|gb|AAA72676.1| carbamyl phosphate synthetase [Methanosarcina barkeri]
          Length = 398

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 16 NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS--KGGVRVE 73
           VP  +G   +S   A    K +  P+ V  S +  G   +  + E+  +   K  VRV 
Sbjct: 3  GVPQPEGGYATSQKEAIEVAKRIGFPVLVRPSYVLGGRAMEIVYDEMDLERYMKEAVRVS 62

Query: 74 SS----LKSVISDIREI 86
                +   +    EI
Sbjct: 63 HEHPILIDDFLEAASEI 79


>gi|116626839|ref|YP_828995.1| acetyl-CoA carboxylase, biotin carboxylase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116230001|gb|ABJ88710.1| acetyl-CoA carboxylase, biotin carboxylase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 453

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+A +R+  VPV  G   V+SS        + +  P+ ++K+
Sbjct: 123 ARAFMREMGVPVLPGSPGVLSSAEEGLELAEKVGYPV-ILKA 163


>gi|330831103|ref|YP_004394055.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Aeromonas veronii B565]
 gi|328806239|gb|AEB51438.1| Phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Aeromonas veronii B565]
          Length = 428

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHAIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G   + V +E+  +   E    ++VD   
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|297694348|ref|XP_002824441.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like isoform 2 [Pongo abelii]
          Length = 702

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 153 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 197

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 198 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 250

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 251 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDVETRRAMGEQAVALARAVKYSSAG 307

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 308 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 340


>gi|295821183|ref|NP_001171475.1| propionyl-CoA carboxylase alpha chain, mitochondrial isoform c
           precursor [Homo sapiens]
          Length = 681

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|302876928|ref|YP_003845561.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium
           cellulovorans 743B]
 gi|307687617|ref|ZP_07630063.1| biotin carboxylase [Clostridium cellulovorans 743B]
 gi|302579785|gb|ADL53797.1| acetyl-CoA carboxylase, biotin carboxylase [Clostridium
           cellulovorans 743B]
          Length = 448

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKS 47
           A+ ++R+  VP+  G    I     A    K +  P+ V  +
Sbjct: 119 AREIMREAGVPIVPGYEGAIRDEEHALEIAKEIGFPVMVKAA 160


>gi|172044668|sp|Q8FMB3|PURT_COREF RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
          Length = 402

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 24/105 (22%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +     S+     +A + L  P  VVK  + + G+G+             V     
Sbjct: 130 GLPTSGYEFCSTFEEFTAAAERLGYP-NVVKPVMSSSGKGQSV-----------VTSAED 177

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
           L+S       + G+ +              V VE   +   E+ L
Sbjct: 178 LESAWEYA--MSGARVSN----------QRVIVEQFVEFDYEITL 210


>gi|90076918|dbj|BAE88139.1| unnamed protein product [Macaca fascicularis]
          Length = 525

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEVQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|111021748|ref|YP_704720.1| phosphoribosylamine--glycine ligase [Rhodococcus jostii RHA1]
 gi|110821278|gb|ABG96562.1| phosphoribosylamine--glycine ligase [Rhodococcus jostii RHA1]
          Length = 417

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 29/128 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A   ++ S    + A+     P +VVK    A G+             
Sbjct: 106 AKDVMAAAGVKTAHSEIVDSPAKLDEALDRFG-PNWVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +   +      E+L            G  V    +E   D   E+ L  +VD  
Sbjct: 152 -GVVVTTDRDAARDHAAELL----------ENGHPV---LLESFLD-GPEVSLFCVVDGE 196

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 197 TVVPLLPA 204


>gi|304388391|ref|ZP_07370501.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           ATCC 13091]
 gi|304337623|gb|EFM03782.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           ATCC 13091]
          Length = 1071

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAMNP-ENGEMIVIEMNPRVSRSSA 309


>gi|313127411|ref|YP_004037681.1| hypothetical protein Hbor_26880 [Halogeometricum borinquense DSM
           11551]
 gi|312293776|gb|ADQ68236.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
           11551]
          Length = 407

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 22  GVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81
           G V+         +K L   +  +KS+  A         + P   +G V + S+ + +  
Sbjct: 238 GSVLFDSEDVAEEVKELEAEVDALKSRFEAWVLRAAGRVDDPVQLRGLVHIASATEVISD 297

Query: 82  DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL----SLLVDRTSGMVAFIAST 137
              EI    L     G     V    VE+  +I+  L++    SL  +        +  T
Sbjct: 298 AALEISEGVL----RGIDAHPVVAAAVEESDEIIVRLHVGPGCSLANETLGDR---MVKT 350

Query: 138 QGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV 170
           + GM +  V +   ++       P   +  +DV
Sbjct: 351 ETGMRVIAVRRADGREWVVQP-GPTTELKPDDV 382


>gi|123443448|ref|YP_001007421.1| putative acetyltransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090409|emb|CAL13277.1| putative acetyltransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 880

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 27/223 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAEQLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 VHKSEVQGVMLYLRTAMEVQRAADDILDRVKRTYPQA----RIDGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLC 174
            +++  D   G +  +   +GG++      +    +    ++  +     + +     + 
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEW---HHETQAAVALPPLNMALARYLIIQAVKGGKIR 640

Query: 175 DMLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKN 216
           +   LQ         L   +     D  ++S L+I+P++   +
Sbjct: 641 NRGSLQPLDIPGLSRLLVQVSNLILDCPEISRLDIHPVLASGS 683


>gi|59802251|ref|YP_208963.1| phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae FA 1090]
 gi|293398026|ref|ZP_06642232.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae F62]
 gi|59719146|gb|AAW90551.1| putative phosphoribosylamine--glycine ligase [Neisseria gonorrhoeae
           FA 1090]
 gi|291611972|gb|EFF41041.1| phosphoribosylamine-glycine ligase [Neisseria gonorrhoeae F62]
          Length = 423

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KYN+P A+     +  AA   +     P+ V+K+     G+             
Sbjct: 106 AKAFMVKYNIPTAQYQTFENADAAHDYVNQKGAPI-VIKADGLVAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G     V +ED      E    ++VD  
Sbjct: 152 -GVIVAMTLDEAHAAIDDML----LGNKMGNAG---ERVVIEDFLQ-GEEASFIVMVDGN 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 HVLPM 207


>gi|309776342|ref|ZP_07671330.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915938|gb|EFP61690.1| carbamoyl-phosphate synthase, large subunit [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 1068

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           H ++A   L + ++P   G     V  A      +  P+ V  S +  GGR     + + 
Sbjct: 668 HAFEAM--LHELDIPQPTGQTAVEVEEAVKIANRIGYPVLVRPSYVL-GGRAM---EIVH 721

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQ 95
            D    + + +++K +  D   ++   ++ K+
Sbjct: 722 NDEDLRIYMATAVKEISHDAPILVDKYIVGKE 753



 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 4/48 (8%)

Query: 9   KALLRK--YNV--PVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L R   Y +  PV +  ++ +V  A S    +  P+ V  +    G
Sbjct: 129 RELFRDLMYEIKEPVPESDIVHTVEEAISFANEIGYPVVVRPAYTLGG 176


>gi|254671009|emb|CBA07784.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
           alpha153]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|222106691|ref|YP_002547482.1| acetyl-CoA carboxylase biotin carboxylase [Agrobacterium vitis S4]
 gi|221737870|gb|ACM38766.1| acetyl-CoA carboxylase biotin carboxylase [Agrobacterium vitis S4]
          Length = 666

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 63/214 (29%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G   +I+    A      +  P+ +  S                  
Sbjct: 120 SKKLAAEAGVSTVPGHMGLIADADEAVKIAAQIGYPVMIKAS---------------AGG 164

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  +        +      + +          + +++E   D  R + + +L D
Sbjct: 165 GGKGMRIAWNDAEAREGFQSSKNEAMNSFGD-------DRIFIEKFVDQPRHIEIQVLGD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
           +       +   +    I+   +   ++     +D        E   +L   +       
Sbjct: 218 KHGN---VLYLGERECSIQRRNQKVIEEAPSPFLDADTRKAMGEQAVALAKAVGYYSAGT 274

Query: 185 IDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           ++   D   N Y  F + +  L   +P+  +  G
Sbjct: 275 VEFIVDGNRNFY--FLEMNTRLQVEHPVTELITG 306


>gi|120437606|ref|YP_863292.1| phosphoribosylamine--glycine ligase [Gramella forsetii KT0803]
 gi|117579756|emb|CAL68225.1| phosphoribosylamine--glycine ligase [Gramella forsetii KT0803]
          Length = 423

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +  + +P A  +     S+ A ++ ++TL  P YV+K+   A G+           
Sbjct: 110 AKEFMAMHGIPTAAYESFSFESLGAGKNFLETLK-PPYVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +   L+    ++  +L        +G  G+    V +E+  D   EL + +L D
Sbjct: 158 ---GVLIIEDLEEAKKELENML--------SGKFGAASKKVVIEEFLD-GIELSVFVLTD 205

Query: 126 RTSGMVA 132
             +  + 
Sbjct: 206 GKNYQIL 212


>gi|94987363|ref|YP_595296.1| phosphoribosylamine--glycine ligase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731612|emb|CAJ54975.1| phosphoribosylamine-glycine ligase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 428

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 22/106 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK L+ +  +P A   +   +  A   IK    P+ V+K    A G+             
Sbjct: 106 AKQLMVQLGIPTANYGIFHHIDDARDFIKNTGTPV-VIKVDGLASGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V  + +  +  +  I+   +     G +G+    + +E+  +
Sbjct: 152 -GVFVSHTEEDALKALEYIMDKKVF----GESGA---TIVIEEFLE 189


>gi|325133501|gb|EGC56164.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M13399]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|238911341|ref|ZP_04655178.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 554

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 85/268 (31%), Gaps = 51/268 (19%)

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINP 210
            I    +D   G+T   V  L + L    Q    G     +L +   +      L E N 
Sbjct: 67  AIRTEAVD--DGITQVIVRQLEEAL----QQLAQGSSGSQSLIQVRRWESACQKLPEANL 120

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD---VSEEDSREIEAKQHN-------- 259
            ++   G      +     + AL R L++    D   + +E   +  A+           
Sbjct: 121 ALVSVAGEYAAELA-----EQALDRSLNVMIFSDNVTLDDEIRLKRRARDKGLLVMGPDC 175

Query: 260 -----------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGA 303
                       + +  +GNIG +             I L G    + +     D+    
Sbjct: 176 GTAMIANTPLAFANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEV 235

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                  A  I+++D   +   +  F      D + + I++A+K      P+V    G +
Sbjct: 236 GGISALTALDILSADEKSQ---VLAFVSKPPADAVRQHIIAAMKATG--KPVVALFLGFS 290

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKI 391
             +          NV  A  LD+AA+  
Sbjct: 291 SPVARE------ENVWFASTLDEAARLA 312


>gi|114650512|ref|XP_001149000.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           isoform 9 [Pan troglodytes]
          Length = 728

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|218767563|ref|YP_002342075.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           Z2491]
 gi|22095531|sp|Q9JW02|CARB_NEIMA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|121051571|emb|CAM07869.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           Z2491]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|331702016|ref|YP_004398975.1| pyruvate carboxylase [Lactobacillus buchneri NRRL B-30929]
 gi|329129359|gb|AEB73912.1| Pyruvate carboxylase [Lactobacillus buchneri NRRL B-30929]
          Length = 459

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  ++K  VPV  G   V+++V  AE     +  P+ +  +
Sbjct: 119 AREAMKKAGVPVIPGSDGVVNTVAQAEQVADQIGFPVLLKSA 160


>gi|325129512|gb|EGC52339.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           OX99.30304]
 gi|325135635|gb|EGC58252.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M0579]
 gi|325201504|gb|ADY96958.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M01-240149]
 gi|325207484|gb|ADZ02936.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           NZ-05/33]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|319409827|emb|CBY90135.1| carbamoyl-phosphate synthase large chain (carbamoyl-phosphate
           synthetase ammonia chain) [Neisseria meningitidis WUE
           2594]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|226311918|ref|YP_002771812.1| biotin carboxylase [Brevibacillus brevis NBRC 100599]
 gi|226094866|dbj|BAH43308.1| biotin carboxylase [Brevibacillus brevis NBRC 100599]
          Length = 451

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 10/95 (10%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VP   G   +I  V  A      +  P+ V K+    GGRG     +    
Sbjct: 119 AKDTMKTAGVPTVPGTEGLIEDVADAVVTANKIGYPVMV-KATAGGGGRGMRVAVDDEDL 177

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTG 100
            K        ++   ++ +   G+  +  +    G
Sbjct: 178 EKA-------IRQAQNEAKTAFGNPGVYLEKFVEG 205


>gi|218288259|ref|ZP_03492558.1| phosphoribosylamine/glycine ligase [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241618|gb|EED08791.1| phosphoribosylamine/glycine ligase [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 428

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K ++ +  VP A+    S V  A + ++    P+ VVK+   A G+G
Sbjct: 113 SKRVMEEAGVPTARHRTFSDVEEARAYVRAQGAPI-VVKADGLAAGKG 159


>gi|194390906|dbj|BAG60571.1| unnamed protein product [Homo sapiens]
          Length = 681

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|239918330|ref|YP_002957888.1| phosphoribosylamine--glycine ligase [Micrococcus luteus NCTC 2665]
 gi|239839537|gb|ACS31334.1| phosphoribosylamine--glycine ligase [Micrococcus luteus NCTC 2665]
          Length = 429

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 18/108 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V ++   A +A+     P +VVK    A G+             
Sbjct: 106 AKEVMSAAGVPTAGSRVCTTAAEAAAALDEFGAP-HVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V S     ++        G T++ +     G  V+   + DG D
Sbjct: 152 -GVVVTSDRAEALAHAEACFAAGGTVVIEDFL-DGPEVSLFVICDGED 197


>gi|153814987|ref|ZP_01967655.1| hypothetical protein RUMTOR_01202 [Ruminococcus torques ATCC 27756]
 gi|317501571|ref|ZP_07959766.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088558|ref|ZP_08337470.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847555|gb|EDK24473.1| hypothetical protein RUMTOR_01202 [Ruminococcus torques ATCC 27756]
 gi|316897030|gb|EFV19106.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330407780|gb|EGG87276.1| phosphoribosylamine-glycine ligase [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 428

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KY++P A     +    A + ++    P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYDIPTAGYENFTDPKEAIAYLENAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +     ++ I    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICQNFEEAKEGVKTI----MLDKKFGTAG---NEMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GKTIKTMTSAQD 212


>gi|121634229|ref|YP_974474.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           FAM18]
 gi|161869361|ref|YP_001598528.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           053442]
 gi|120865935|emb|CAM09672.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           FAM18]
 gi|161594914|gb|ABX72574.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           053442]
 gi|325131499|gb|EGC54206.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M6190]
 gi|325137545|gb|EGC60127.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           ES14902]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|281415472|ref|ZP_06247214.1| phosphoribosylamine--glycine ligase [Micrococcus luteus NCTC 2665]
          Length = 425

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 18/108 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   V ++   A +A+     P +VVK    A G+             
Sbjct: 102 AKEVMSAAGVPTAGSRVCTTAAEAAAALDEFGAP-HVVKDDGLAAGK------------- 147

Query: 68  GGVRVESSLKSVISDIREIL--GSTLITKQTGPTGSRVNCVYVEDGAD 113
            GV V S     ++        G T++ +     G  V+   + DG D
Sbjct: 148 -GVVVTSDRAEALAHAEACFAAGGTVVIEDFL-DGPEVSLFVICDGED 193


>gi|317046457|ref|YP_004114105.1| phosphoribosylamine/glycine ligase [Pantoea sp. At-9b]
 gi|316948074|gb|ADU67549.1| phosphoribosylamine/glycine ligase [Pantoea sp. At-9b]
          Length = 426

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +  +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARQQIPTAEYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     ++++L         G  G     + +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAVQDMLA----GNAFGDAGH---RIVIEEFLD-GEEASFIVMVDGDN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|221638604|ref|YP_002524866.1| Propionyl-CoA carboxylase subunit alpha [Rhodobacter sphaeroides
           KD131]
 gi|221159385|gb|ACM00365.1| Propionyl-CoA carboxylase alpha subunit [Rhodobacter sphaeroides
           KD131]
          Length = 667

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L ++  V    G   +I+    A      +  P+ +  S                  
Sbjct: 120 SKKLAKEAGVSTVPGYMGLIADADEAVKISNEIGYPVMIKAS---------------AGG 164

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   V             +K         + +++E      R + + +L D
Sbjct: 165 GGKGMRIAWSEAEVKEGFE-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLAD 217

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
           +    V      +    I+   +   ++     +D        E   +L   +       
Sbjct: 218 KHGNCVYL---HERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQACALAKAVGYASAGT 274

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D   N Y  F + +  L   +P+  +  G
Sbjct: 275 VEFIVDGQKNFY--FLEMNTRLQVEHPVTELITG 306


>gi|193290652|gb|ACF17634.1| putative acetyl co-enzyme A carboxylase biotin carboxylase subunit
           [Capsicum annuum]
          Length = 536

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ S        + +  P+ ++K+    GGRG    KE    
Sbjct: 188 ARDTMKNAGVPTVPGSDGLLQSTEEGVRLAEEIGYPV-MIKATAGGGGRGMRLAKEPG-- 244

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
                     L+   S+     G+ 
Sbjct: 245 -----EFVKLLQQAKSEAAAAFGND 264


>gi|91762828|ref|ZP_01264793.1| Carbamoyl-phosphate synthase large chain [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718630|gb|EAS85280.1| Carbamoyl-phosphate synthase large chain [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 1074

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 14/214 (6%)

Query: 9   KALLRKYNVPV--AKGVVISSVHAAESAIKT-LPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K +L+KY + +  A    IS+    +   K  L   L + KS++ +  R   +  +    
Sbjct: 105 KGILKKYKIELIGANSKAISNAEDRKKFRKNMLDIGLDLPKSKVVSHIRDAAKALK-QIG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               +R   +L  +   I +     L   + G   S V  + +E+  +  +E  + ++ D
Sbjct: 164 LPAIIRPAFTLGGLGGGIAKTEKEYLKIVKDGLHESPVKQILIEECLEGWKEFEMEVVRD 223

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQA 183
           +    +           IE +          + + P + +T     V     +  L+   
Sbjct: 224 KKDNCIII-------CSIENIDPMGIHTGDSITVAPALTLTDKEYQVMRNASIACLRKIG 276

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
              GG           D  M ++E+NP +   + 
Sbjct: 277 VETGGSNVQFAINP-KDGRMVIIEMNPRVSRSSA 309


>gi|327267929|ref|XP_003218751.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like [Anolis carolinensis]
          Length = 709

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 64/211 (30%), Gaps = 31/211 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 160 ESKILAKNAKVNTIPGYDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 204

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 205 GGGKGMRIAWDDEETREGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 257

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++     +DP       E   +L   ++     
Sbjct: 258 DKHGNALWL---NERECSIQRRNQKVIEEAPSTFLDPETRRAMGEQAVALAKAVKYSSAG 314

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLII 213
            ++   D   N Y  F + +  L   +P+  
Sbjct: 315 TVEFLVDSKKNFY--FLEMNTRLQVEHPITE 343


>gi|325143751|gb|EGC66068.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           M01-240013]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|323706263|ref|ZP_08117830.1| D-alanine/D-alanine ligase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534427|gb|EGB24211.1| D-alanine/D-alanine ligase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 362

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 64/226 (28%), Gaps = 65/226 (28%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAE-------SAIKTLPGPLYVVKSQIHAGGRGKGR 58
           +K +  +  +P  K  V+   +++  +          + +  P +V  + +         
Sbjct: 140 SKRIFLESGIPTPKFTVVYRKNLNDVDKHEKIRSEISEKIGYPCFVKPANM--------- 190

Query: 59  FKELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                  S  G+    +   +I  ++                     + VE+G D  RE+
Sbjct: 191 ------GSSVGISKVHNEGELIDALK-------------IAAKYDRKIIVEEGID-AREI 230

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL--CDM 176
             S+L +                       D P+      I P       D         
Sbjct: 231 ECSVLGN-----------------------DNPEASVAGEIVPAHEFYDYDAKYFDEASK 267

Query: 177 LELQGQARIDGGDLFPNLY-KAFCDKDMS-LLEINPLIIMKNGRLR 220
           L +         +    L  KA+   D+  +  ++ L+    G++ 
Sbjct: 268 LFIPAPIPDAKMEEIRELAIKAYTALDVRGMARVDFLMDKNTGKVY 313


>gi|304382508|ref|ZP_07365003.1| carbamoyl-phosphate synthase, large subunit [Prevotella marshii DSM
           16973]
 gi|304336339|gb|EFM02580.1| carbamoyl-phosphate synthase, large subunit [Prevotella marshii DSM
           16973]
          Length = 1076

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 34/122 (27%), Gaps = 28/122 (22%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++ ++   K     ++  A  A   L  P+ +  +    G                G  
Sbjct: 135 LKEIDIKTIKSEACENIEQARKAAAELGYPIIIRAAYALGGL---------------GSG 179

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + + +I    +    +               V VE      +E+   ++ DR    +
Sbjct: 180 FCDNEEELIKLAEKAFSFS-------------PQVLVEKSLKGWKEIEYEVVRDRYDNCI 226

Query: 132 AF 133
             
Sbjct: 227 TV 228


>gi|296313298|ref|ZP_06863239.1| carbamoyl-phosphate synthase, large subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296840205|gb|EFH24143.1| carbamoyl-phosphate synthase, large subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|256847340|ref|ZP_05552786.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256716004|gb|EEU30979.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 1058

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ + PV     +S+V  A +    +  P+ V
Sbjct: 133 KELMQQLHEPVPASQTVSTVDEALAFAHQIGYPVIV 168


>gi|224541435|ref|ZP_03681974.1| hypothetical protein CATMIT_00597 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525627|gb|EEF94732.1| hypothetical protein CATMIT_00597 [Catenibacterium mitsuokai DSM
           15897]
          Length = 1065

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            +L K  +   +G  + +V  A      L  P+ V  S +  G
Sbjct: 673 EVLEKCEIDRPRGATVFTVDEALEVANKLGYPVLVRPSYVLGG 715


>gi|116748158|ref|YP_844845.1| D-alanine--D-alanine ligase domain-containing protein
           [Syntrophobacter fumaroxidans MPOB]
 gi|116697222|gb|ABK16410.1| D-alanine--D-alanine ligase [Syntrophobacter fumaroxidans MPOB]
          Length = 326

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           +++H+  AK +LR   +P A  VVI  V   E+      G  + V ++  A G GKG   
Sbjct: 105 LSLHKGMAKNVLRNMGIPTADFVVIQDVSETEAI-----GIPFPVFAKPVAEGTGKG--- 156

Query: 61  ELPADSKGGVRVESSLKSVISDIREIL 87
                         + + +++  R++L
Sbjct: 157 ------IDAASRIGTQEELVAKCRQLL 177


>gi|189499301|ref|YP_001958771.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           phaeobacteroides BS1]
 gi|189494742|gb|ACE03290.1| acetyl-CoA carboxylase, biotin carboxylase [Chlorobium
           phaeobacteroides BS1]
          Length = 447

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 58/162 (35%), Gaps = 33/162 (20%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G   +IS  + A    + +  P+ ++K    AGG GKG          G     
Sbjct: 127 GVPVVPGSSGLISDGNEALKTAEKIGYPI-IIKP--TAGGGGKGMRVVNDGGELG----- 178

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            ++ +  ++ ++  G+              + VY+E   +  R + + +L D+    +  
Sbjct: 179 KAIATAQNEAQQAFGN--------------SGVYIEKFIECPRHVEIQVLSDQHGNTIHL 224

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
                 G     + + + + I +    P   +  E    + +
Sbjct: 225 ------GERDCTIQRRHQKLIEET---PSPAIHEEQRRKMGE 257


>gi|330899027|gb|EGH30446.1| hypothetical protein PSYJA_16297 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 483

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 8   AKALLRKYNVP--VAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ L  K  +P       V++SV  A  A   L G  +V+K  IH GG          A+
Sbjct: 137 ARDLFSK--IPEIATPYRVVASVEEALKAYDELGGGKFVMKP-IHGGGSALVVIDIDSAE 193

Query: 66  SKGGV 70
               V
Sbjct: 194 KVAAV 198


>gi|307566892|gb|ADN52612.1| acetyl-CoA carboxylase BC subunit [Jatropha curcas]
          Length = 536

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ +   A      +  P+ ++K+    GGRG          
Sbjct: 190 ARETMKNAGVPTVPGSDGLLQNTEEAVKLAHEIGFPV-MIKATAGGGGRGM-------RL 241

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
           +K        L+   S+     G+ 
Sbjct: 242 AKEPDEFVKLLQQAKSEAAAAFGND 266


>gi|289643184|ref|ZP_06475312.1| Carbamoyl-phosphate synthase L chain ATP-binding [Frankia symbiont
           of Datisca glomerata]
 gi|289507015|gb|EFD27986.1| Carbamoyl-phosphate synthase L chain ATP-binding [Frankia symbiont
           of Datisca glomerata]
          Length = 448

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A++++    +P+  G    +     A      +  P+ ++K+    GGRG     E  A 
Sbjct: 119 ARSIMSDAGLPLLPGSRDALEHADEAAEFAAGIGYPV-IIKAVAGGGGRGMSVVHEPDAF 177

Query: 66  SKG 68
            + 
Sbjct: 178 LRA 180


>gi|284174351|ref|ZP_06388320.1| ribosomal protein S6 modification protein (rimK-1) [Sulfolobus
           solfataricus 98/2]
 gi|261601772|gb|ACX91375.1| lysine biosynthesis enzyme LysX [Sulfolobus solfataricus 98/2]
          Length = 283

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L ++N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 95  ILARHNIPTPKTFIAFDKTNAIEYSKKLGYPV-VIKPVEGSWGRMVAKADNL 145


>gi|238837063|gb|ACR61637.1| heteromeric acetyl-CoA biotin carboxylase [Jatropha curcas]
          Length = 536

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  ++   VP   G   ++ +   A      +  P+ ++K+    GGRG          
Sbjct: 190 ARETMKNAGVPTVPGSDGLLQNTEEAVKLAHEIGFPV-MIKATAGGGGRGM-------RL 241

Query: 66  SKGGVRVESSLKSVISDIREILGST 90
           +K        L+   S+     G+ 
Sbjct: 242 AKEPDEFVKLLQQAKSEAAAAFGND 266


>gi|169403194|emb|CAQ15969.1| putative biotin carboxylase [uncultured archaeon]
          Length = 153

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 7  QAKALLRKY-NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            K +  ++  VP+  G    + S+  A    + +  P+ V K+    GGRG
Sbjct: 35 DGKRI-AQFPGVPIVPGSDGPVESIEEALKIAEKIGYPIMV-KAASGGGGRG 84


>gi|169235552|ref|YP_001688752.1| phosphoribosylaminoimidazole carboxylase carbon dioxide-fixation
           subunit [Halobacterium salinarum R1]
 gi|167726618|emb|CAP13403.1| phosphoribosylaminoimidazole carboxylase carbon dioxide-fixation
           subunit [Halobacterium salinarum R1]
          Length = 384

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK---G 68
           L    +PV     +       +A + L  P  ++K +            +  AD++   G
Sbjct: 115 LADAGIPVPAFRAVDDAADLRAAFEELGAP-LMLKRRTGGYDGSGNAPVDSVADARAEFG 173

Query: 69  GVRVESSLKSVISDIREI 86
           G       + ++   RE+
Sbjct: 174 GDLGGFVAEELVDFEREL 191


>gi|160897204|ref|YP_001562786.1| CoA-binding domain-containing protein [Delftia acidovorans SPH-1]
 gi|160362788|gb|ABX34401.1| CoA-binding domain protein [Delftia acidovorans SPH-1]
          Length = 700

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 77/236 (32%), Gaps = 41/236 (17%)

Query: 3   IHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           + E QAKA+ R++ VP A   V+ +   AE+A + L G + V+K             +  
Sbjct: 480 LDEAQAKAVFRRFGVPCAAERVVRTAEEAEAAARELGGRV-VLKI---------LSSRIT 529

Query: 63  PADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
                GGV V  + +++ + +  +     +       G R +   V+       EL L L
Sbjct: 530 HKSDVGGVAVGLTAQTIGARLGAM-----VADVQARAGVRPDRFLVQQMVAGGTELILGL 584

Query: 123 LVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-----VTSEDVASLCDML 177
             D     V       GG+  E       + +      P  G     ++  +   +   L
Sbjct: 585 HKDALGTAVML---GMGGVAAELFQDTTLRLL------PDDGTQLGVLSRSEALDMAREL 635

Query: 178 ----------ELQGQARIDGGDLFPNLYKAFCDKDMSLL--EINPLIIMKNGRLRV 221
                                D          +    ++  EINP+ ++  G+   
Sbjct: 636 KTWPLLDGFRGRPKADVDALADAIVAFSAMAAELGDRVIEAEINPVFVLPQGQGVC 691


>gi|154174143|ref|YP_001407817.1| phosphoribosylamine--glycine ligase [Campylobacter curvus 525.92]
 gi|112802684|gb|EAU00028.1| phosphoribosylamine--glycine ligase [Campylobacter curvus 525.92]
          Length = 417

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +  +  AK +     + A   I  L  P+ VVK+     G+              
Sbjct: 105 KDFLARNGIKTAKYLNTDDKNEAFKFIDFLSVPV-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  +     + + ++L         G  G RV    VE+  D
Sbjct: 150 GVIIARTHDEAKTAVSDML----SGDSFGEAGKRV---VVEEFLD 187


>gi|71065620|ref|YP_264347.1| phosphoribosylamine--glycine ligase [Psychrobacter arcticus 273-4]
 gi|71038605|gb|AAZ18913.1| phosphoribosylamine--glycine ligase [Psychrobacter arcticus 273-4]
          Length = 442

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + + N+P A     +   AA++ I     P+ V+K+   A G+             
Sbjct: 113 AKEFMAQNNIPTAAYQGFTDAVAAKAYIDEQGAPI-VIKADGLAAGK------------- 158

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV V  +++     I ++L       + G  G   + V +E         ++ ++
Sbjct: 159 -GVIVAETIEQAHEAIDDMLA----DNKFGDAG---SRVVIEQFLQGEEASFICMV 206


>gi|15677690|ref|NP_274851.1| carbamoyl phosphate synthase large subunit [Neisseria meningitidis
           MC58]
 gi|22095532|sp|Q9JXW8|CARB_NEIMB RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|7227111|gb|AAF42189.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           MC58]
 gi|316985462|gb|EFV64409.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
           H44/76]
 gi|325139516|gb|EGC62056.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           CU385]
 gi|325200914|gb|ADY96369.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           H44/76]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|296108893|ref|YP_003615842.1| phosphoribosylglycinamide formyltransferase 2 [Methanocaldococcus
           infernus ME]
 gi|295433707|gb|ADG12878.1| phosphoribosylglycinamide formyltransferase 2 [Methanocaldococcus
           infernus ME]
          Length = 385

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 34/158 (21%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           V  A+    S++   + A++ L  P  VVK  + + G+G+             VR E  +
Sbjct: 124 VKTARYSFASNLEELKEAVEKLGFPC-VVKPIMSSSGKGQSV-----------VRKEEDI 171

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL--SLLVDRTSGMVAFI 134
           +      RE           G  G   + V VE+  +   EL +  +  V  T       
Sbjct: 172 EKAYRIARE-----------GARGRG-DRVIVEEFINFDYELTILTARTVYGTYCCQPIG 219

Query: 135 ASTQGGMDIEEVAKDYP--------QKIFKLLIDPLIG 164
              + G  IE               ++I K ++D L G
Sbjct: 220 HVQESGDYIESWQPHSVSEEVRKKAEEIAKKVVDKLGG 257


>gi|262306509|gb|ACY45847.1| pyrimidine biosynthesis [Polyzonium germanicum]
          Length = 194

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     ++V  A      L  P+ V  +    G
Sbjct: 102 MAEIGEQVAPSHAATTVDEAVEVAALLGYPVLVRAAYALGG 142


>gi|260914713|ref|ZP_05921178.1| carbamoyl-phosphate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260631217|gb|EEX49403.1| carbamoyl-phosphate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 41/159 (25%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +   A +A   +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSTPKSFVCHTFDEAWAAQAEVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +     +               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFYAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIIV-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|297544100|ref|YP_003676402.1| phosphoribosylamine/glycine ligase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841875|gb|ADH60391.1| phosphoribosylamine/glycine ligase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 419

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 67/218 (30%), Gaps = 34/218 (15%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KYN+P  +             +K    P+ V+K+   A G+              
Sbjct: 107 KQLLSKYNIPTGRFKAFDKYQEVLKFLKETWYPV-VMKADGLAQGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +          +  ++   +     G +G  V    +E+     +E  +    D  +
Sbjct: 152 GVFIVKDFIEAKEALDLMMKKRIF----GASGDIV---IIEEML-FGKEASVFAFTDGEN 203

Query: 129 GMVAFIASTQGGMDIEEV--AKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
            +    A     MD ++V      P       I P   +  E +  + + +       + 
Sbjct: 204 ILPMVSA-----MDYKKVYEGDKGPNTGGMGSIAPNPYLEEETLKEVMESILKPMVKALQ 258

Query: 187 GGDLFPN--LYK--AFCDKDMSLLEINPLIIMKNGRLR 220
              +     LY      ++   +LE N        ++ 
Sbjct: 259 KEGIVYKGVLYAGLMLTEEGPKVLEFNARFGDPETQVV 296


>gi|254804321|ref|YP_003082542.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
           alpha14]
 gi|254667863|emb|CBA03922.1| carbamoyl-phosphate synthase large chain [Neisseria meningitidis
           alpha14]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|227904290|ref|ZP_04022095.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           acidophilus ATCC 4796]
 gi|227867938|gb|EEJ75359.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           acidophilus ATCC 4796]
          Length = 1062

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 15/93 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L ++   PV     +++V AA      +  P+ V  +                  +
Sbjct: 131 QFKNLCKELGEPVPPSKTVNTVEAAVEFGDEIGYPIIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
            GG+    + K +    +  L  + +T+     
Sbjct: 178 GGGI--CHNRKELAEIAKNGLELSPVTECLIEK 208


>gi|167761657|ref|ZP_02433784.1| hypothetical protein CLOSCI_04069 [Clostridium scindens ATCC 35704]
 gi|167660800|gb|EDS04930.1| hypothetical protein CLOSCI_04069 [Clostridium scindens ATCC 35704]
          Length = 423

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L++KYN+P A     +    A + ++T   P+ V+K+   A G+             
Sbjct: 106 SKDLMKKYNIPTAAYENFTDPQKALAYLETAKFPI-VLKADGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV + S+L+     ++ I    ++ K+ G  G   N + +E+         +S+L    
Sbjct: 152 -GVLICSTLEEAREGVKTI----MLDKKFGSAG---NEMVIEEFMTGRE---VSVLSFVD 200

Query: 128 SGMVAFIASTQG 139
              +  + S Q 
Sbjct: 201 GNTIKTMTSAQD 212


>gi|148645017|gb|ABR01040.1| AccC [uncultured Geobacter sp.]
          Length = 221

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 14 KYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
          K  VP+  G    + +V  A    K +  P+ ++K+    GGRG
Sbjct: 55 KQGVPILPGTKEGVHTVEDAVKVAKEIGFPV-IIKATAGGGGRG 97


>gi|156972571|ref|YP_001443478.1| phosphoribosylamine--glycine ligase [Vibrio harveyi ATCC BAA-1116]
 gi|156524165|gb|ABU69251.1| hypothetical protein VIBHAR_00211 [Vibrio harveyi ATCC BAA-1116]
          Length = 429

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALTYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|149190647|ref|ZP_01868915.1| phosphoribosylamine--glycine ligase [Vibrio shilonii AK1]
 gi|148835530|gb|EDL52499.1| phosphoribosylamine--glycine ligase [Vibrio shilonii AK1]
          Length = 429

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHAIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|134103590|ref|YP_001109251.1| phosphoribosylamine--glycine ligase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133916213|emb|CAM06326.1| phosphoribosylamine--glycine ligase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 405

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 29/128 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   ++ +    ++A+     P +VVK    AGG+             
Sbjct: 91  AKDVMLAAGVPTAHSEIVDNPAKLDAALHRFG-PTWVVKDDGLAGGK------------- 136

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S   +  +    +L            G  V    +E   D         + D T
Sbjct: 137 -GVLVSSDFDAARAHALTLLD----------DGHPV---LLESFLDGPEASLFCFV-DGT 181

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 182 TVVPLLPA 189


>gi|58337650|ref|YP_194235.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           acidophilus NCFM]
 gi|75357469|sp|Q5FJC0|CARB_LACAC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|58254967|gb|AAV43204.1| carbamoyl-phosphate synthase, large subunit (glutamine-hydrolyzing)
           [Lactobacillus acidophilus NCFM]
          Length = 1062

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 15/93 (16%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           Q K L ++   PV     +++V AA      +  P+ V  +                  +
Sbjct: 131 QFKNLCKELGEPVPPSKTVNTVEAAVEFGDEIGYPIIVRPA-------------FTMGGT 177

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPT 99
            GG+    + K +    +  L  + +T+     
Sbjct: 178 GGGI--CHNRKELAEIAKNGLELSPVTECLIEK 208


>gi|325915492|ref|ZP_08177805.1| carbamoyl-phosphate synthase large subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538293|gb|EGD09976.1| carbamoyl-phosphate synthase large subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 1080

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPKAEVAHTLEEALDIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIEIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|313895745|ref|ZP_07829301.1| carbamoyl-phosphate synthase, large subunit [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|312975871|gb|EFR41330.1| carbamoyl-phosphate synthase, large subunit [Selenomonas sp. oral
           taxon 137 str. F0430]
          Length = 1075

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K   P+ +  ++  VH+A      +  P+ V  +    G             + G
Sbjct: 133 KETMEKLGEPIPESTIVEDVHSAVEFANKIGYPVIVRPAYTMGG-------------TGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    + + +I+ + + L  ++I             V +E      +E+   ++  R  
Sbjct: 180 GI--AENEEELIAIVIKGLNYSMIG-----------QVLIERSVAGWKEIEFEVI--RDG 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA-------SLCDMLELQG 181
                   +    D   V       I   ++ P   +T  +          +   L ++G
Sbjct: 225 RDNCITVCSMENFDP--VGVHTGDSI---VVAPAQTLTDHEYQMLRSSSLRIIRELGIEG 279

Query: 182 QARIDGG 188
                  
Sbjct: 280 GCNAQYA 286


>gi|260493963|ref|ZP_05814094.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 3_1_33]
 gi|260198109|gb|EEW95625.1| phosphoribosylamine-glycine ligase [Fusobacterium sp. 3_1_33]
          Length = 426

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  AK    +    A   +  +  P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYGVKTAKYQSFTDKEKAIKYLDEMSYPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  S K   + + ++    +  K     G   + V +E+  D +    +S+L    
Sbjct: 152 -GVIIAQSRKEAENALNDM----MTNKVFAAAG---DTVVIEEFLDGVE---ISVLSITD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SEVIIPFISAKDHKKISE 218


>gi|241889438|ref|ZP_04776739.1| carbamoyl-phosphate synthase, large subunit [Gemella haemolysans
           ATCC 10379]
 gi|241863981|gb|EER68362.1| carbamoyl-phosphate synthase, large subunit [Gemella haemolysans
           ATCC 10379]
          Length = 1058

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+ + N PV +  +I+++  A   +  +  P+ V
Sbjct: 133 RDLMNELNEPVPESAIITTLDEAREFVAEIGYPVIV 168



 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL K ++P   G     V  A    + +  P+ V  S +  G
Sbjct: 672 ELLHKLDIPQPLGKTAFDVETAVKNAEEIGYPVLVRPSYVLGG 714


>gi|225620223|ref|YP_002721480.1| phosphoribosylamine--glycine ligase [Brachyspira hyodysenteriae
           WA1]
 gi|225215042|gb|ACN83776.1| Phosphoribosylamine-glycine ligase [Brachyspira hyodysenteriae WA1]
          Length = 417

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 42/116 (36%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  A+  + +  + A   +     P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYGVKTAEYELFTDYNKANEYLDKCGYPI-VIKASGLALGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +    +   + + +I+   +              V +E+  + +    LS+ 
Sbjct: 152 -GVLICQDKQEAKNALEDIMVKKIFKDAGDE-------VVIEEFLEGVEASILSVT 199


>gi|213692800|ref|YP_002323386.1| Phosphoribosylaminoimidazole carboxylase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213524261|gb|ACJ53008.1| Phosphoribosylaminoimidazole carboxylase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 445

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 158 GLPTTPYRFAGSLEELHAGASEVGYPC-VVKPVMSSSGHGQSV-----------VRSADA 205

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 206 IDAAWTEAQE--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 255

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 256 PIGQRQESGDYRESWQPATE 275


>gi|210615481|ref|ZP_03290608.1| hypothetical protein CLONEX_02824 [Clostridium nexile DSM 1787]
 gi|210150330|gb|EEA81339.1| hypothetical protein CLONEX_02824 [Clostridium nexile DSM 1787]
          Length = 423

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 29/134 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +K L++KYN+P A      +   A+ A+  L    +  V+K+   A G+           
Sbjct: 106 SKDLMKKYNIPTAGY---ENFDDAKKALAYLETAKFPIVLKADGLALGK----------- 151

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV + ++L+     ++ I    ++ KQ G  G   N + +E+         +S+L  
Sbjct: 152 ---GVLICNTLEEAKDGVQSI----MLDKQFGTAG---NTMVIEEFMTGRE---VSVLSF 198

Query: 126 RTSGMVAFIASTQG 139
                +  + S Q 
Sbjct: 199 VDGNTIKTMTSAQD 212


>gi|195978244|ref|YP_002123488.1| carbamoyl phosphate synthase large subunit [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|195974949|gb|ACG62475.1| carbamoyl-phosphate synthase large chain CarB [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 1067

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   P+ +  ++++V  A S    +  P+ V
Sbjct: 142 KQLMKELGEPIPESEIVTTVEGAISFANAIGYPVIV 177


>gi|172045668|sp|O58056|PURT_PYRHO RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
          Length = 430

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  VP ++ +  +++     A + +  P +  K+ + + G+G   F + P D     
Sbjct: 125 LVKEAKVPTSRYMYATTLDELYEACEKIGYPCH-TKAIMSSSGKG-SYFVKGPEDIPKAW 182

Query: 71  RVESSLKSVISDIREIL 87
               +         +I+
Sbjct: 183 EEAKTK--ARGSAEKII 197


>gi|157377098|ref|YP_001475698.1| alpha-L-glutamate ligase [Shewanella sediminis HAW-EB3]
 gi|157319472|gb|ABV38570.1| alpha-L-glutamate ligase, RimK family [Shewanella sediminis
           HAW-EB3]
          Length = 456

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 8/101 (7%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG-RFKELPADSKG 68
            LL+K N+ +      +S       I  + G   +VK  +  G +GKG    E    ++ 
Sbjct: 267 QLLQKNNLDIPTSGFANSPADTTDLIDMVGGAPLIVK--LLEGTQGKGVVLAETRKAAES 324

Query: 69  GVRVESSLKS---VISDIREILGSTLITKQTGPTGSRVNCV 106
            +    SLK+   V   I+E  G  L  +     G  V  +
Sbjct: 325 VINAFKSLKANLLVQEFIKEAQGKDL--RCFVIDGKIVASI 363


>gi|65506442|ref|NP_000273.2| propionyl-CoA carboxylase alpha chain, mitochondrial isoform a
           precursor [Homo sapiens]
 gi|308153661|sp|P05165|PCCA_HUMAN RecName: Full=Propionyl-CoA carboxylase alpha chain, mitochondrial;
           Short=PCCase subunit alpha; AltName:
           Full=Propanoyl-CoA:carbon dioxide ligase subunit alpha;
           Flags: Precursor
 gi|18252315|gb|AAL66189.1|AF385926_1 propionyl-CoA carboxylase alpha subunit [Homo sapiens]
 gi|119629439|gb|EAX09034.1| propionyl Coenzyme A carboxylase, alpha polypeptide, isoform CRA_c
           [Homo sapiens]
 gi|122889297|emb|CAH70370.2| propionyl Coenzyme A carboxylase, alpha polypeptide [Homo sapiens]
 gi|122890711|emb|CAI39557.2| propionyl Coenzyme A carboxylase, alpha polypeptide [Homo sapiens]
 gi|123218103|emb|CAH72681.2| propionyl Coenzyme A carboxylase, alpha polypeptide [Homo sapiens]
 gi|123289714|emb|CAI40434.2| propionyl Coenzyme A carboxylase, alpha polypeptide [Homo sapiens]
          Length = 728

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|15897110|ref|NP_341715.1| ribosomal protein S6 modification protein (rimK-1) [Sulfolobus
           solfataricus P2]
 gi|13813289|gb|AAK40505.1| Ribosomal protein S6 modification protein (rimK-1) [Sulfolobus
           solfataricus P2]
          Length = 286

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L ++N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 98  ILARHNIPTPKTFIAFDKTNAIEYSKKLGYPV-VIKPVEGSWGRMVAKADNL 148


>gi|68536749|ref|YP_251454.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Corynebacterium jeikeium K411]
 gi|68264348|emb|CAI37836.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Corynebacterium jeikeium K411]
          Length = 411

 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 44/182 (24%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+   PV     I S        + + G +  +K+                     GV 
Sbjct: 131 LRELGAPVPAFAAIESAEDIAGFFEAVGGQVC-LKA-------------RRGGYDGKGVW 176

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             +++      + ++L   +              +  E    ++RE  LS +V RT    
Sbjct: 177 FPATVDEARELVEKLLDKEIP-------------LMAEKKVTLVRE--LSAMVARTPSGE 221

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQGQAR 184
                 Q    +E + +D    I    + P    T E +         +   L + G   
Sbjct: 222 V-----QAWPAVESLQEDG---ICVEAVAPAPNSTPEILAAAEQLSRDVATELGVTGVLA 273

Query: 185 ID 186
           ++
Sbjct: 274 VE 275


>gi|330862876|emb|CBX73014.1| uncharacterized protein yfiQ [Yersinia enterocolitica W22703]
          Length = 805

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAEQLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 AHKSEVQGVMLYLRTAMEVQRAADDILDRVKRTYPQA----RIDGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +++  D   G +  +   +GG++   
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEWHH 610


>gi|325141608|gb|EGC64072.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           961-5945]
 gi|325197645|gb|ADY93101.1| carbamoyl-phosphate synthase, large subunit [Neisseria meningitidis
           G2136]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|309379471|emb|CBX21837.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|302671038|ref|YP_003830998.1| carbamoyl-phosphate synthase large subunit CarB2 [Butyrivibrio
           proteoclasticus B316]
 gi|302395511|gb|ADL34416.1| carbamoyl-phosphate synthase large subunit CarB2 [Butyrivibrio
           proteoclasticus B316]
          Length = 1082

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + K  +P+A+  + S V  A+     +  P+ V  S +  GGRG
Sbjct: 681 MEKLGIPMAEAGMASDVEEAKEIAARIGYPVMVRPSFVL-GGRG 723


>gi|227504412|ref|ZP_03934461.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           striatum ATCC 6940]
 gi|227199060|gb|EEI79108.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           striatum ATCC 6940]
          Length = 1113

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P       +S   A S   ++  P+ V  S +  GGRG
Sbjct: 698 KVLAEAKLPAPDFGTATSFEEARSVALSIGYPVLVRPSYVL-GGRG 742


>gi|240112150|ref|ZP_04726640.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           MS11]
 gi|254492955|ref|ZP_05106126.1| carbamoyl-phosphate synthase subunit large chain [Neisseria
           gonorrhoeae 1291]
 gi|268598207|ref|ZP_06132374.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           MS11]
 gi|226511995|gb|EEH61340.1| carbamoyl-phosphate synthase subunit large chain [Neisseria
           gonorrhoeae 1291]
 gi|268582338|gb|EEZ47014.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           MS11]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|225076110|ref|ZP_03719309.1| hypothetical protein NEIFLAOT_01142 [Neisseria flavescens
           NRL30031/H210]
 gi|224952554|gb|EEG33763.1| hypothetical protein NEIFLAOT_01142 [Neisseria flavescens
           NRL30031/H210]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|188532835|ref|YP_001906632.1| Urea amidolyase [Erwinia tasmaniensis Et1/99]
 gi|188027877|emb|CAO95734.1| Urea amidolyase [Erwinia tasmaniensis Et1/99]
          Length = 1205

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 32/205 (15%)

Query: 6   YQAKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L     VP+  G  +++S+  A  A   +  P+ ++KS                 
Sbjct: 117 HRARELAAAAGVPMTPGTPLLNSLDEALGAAAKIGYPV-MLKS----------------T 159

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
              GG+ +                  L  +     G     V++E   D  R + + +  
Sbjct: 160 AGGGGIGLTRCADEAALSAAWESVRRLGEQFFSHAG-----VFLERCIDRARHVEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D        +A  +    ++   +   ++     +      T+   A L   + L  +  
Sbjct: 215 DGKGK---VVALGERDCSLQRRNQKVVEETPAPNLP-----TATRRALLASAVRLGERVN 266

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
                    +Y A  D +   LE+N
Sbjct: 267 YRSAGTVEYIYDAAHD-EFFFLEVN 290


>gi|31789484|gb|AAP58597.1| putative glycinamidribonucleotide synthetase [uncultured
           Acidobacteria bacterium]
          Length = 429

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 27/138 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + + ++P A+  +  S   A + I    L  P  VVK+   A G+           
Sbjct: 106 AKDFMARRHIPTARFHICESADDALATIAGGELGLP-LVVKADGLAAGK----------- 153

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +        + IR++    ++ ++ G  G     V +E+        Y  +L D
Sbjct: 154 ---GVVIAPDRAEAEATIRDV----MVGRRFGAAG---ERVVLEECLVGEEASYF-VLAD 202

Query: 126 RTSGMVAFIASTQGGMDI 143
                   + S Q    I
Sbjct: 203 GEHA--VTLGSAQDHKRI 218


>gi|254563192|ref|YP_003070287.1| phosphoribosylglycinamide synthetase [Methylobacterium extorquens
           DM4]
 gi|254270470|emb|CAX26470.1| phosphoribosylglycinamide synthetase (GAR synthetase)
           [Methylobacterium extorquens DM4]
          Length = 435

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 15/82 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++++P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 112 KDLCAEHDIPTAAFARFTDLEPALAYLRERGAPI-VVKADGLAAGK-------------- 156

Query: 69  GVRVESSLKSVISDIREILGST 90
           GV V  +L    + +R IL  T
Sbjct: 157 GVTVAETLPEAEAAVRAILDGT 178


>gi|297566674|ref|YP_003685646.1| carbamoyl-phosphate synthase large subunit [Meiothermus silvanus
           DSM 9946]
 gi|296851123|gb|ADH64138.1| carbamoyl-phosphate synthase, large subunit [Meiothermus silvanus
           DSM 9946]
          Length = 1030

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 15/70 (21%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P   G V  S   A+   + +  PL V  S +  G                 ++V    
Sbjct: 686 IPQPLGRVAQSPEEAQRLAEGIGYPLMVRPSYVLGG---------------RAMQVVRDA 730

Query: 77  KSVISDIREI 86
             +   + EI
Sbjct: 731 AELRKYLAEI 740


>gi|225868427|ref|YP_002744375.1| carbamoyl-phosphate synthase large chain [Streptococcus equi subsp.
           zooepidemicus]
 gi|259585684|sp|C0MEH1|CARB_STRS7 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|225701703|emb|CAW99044.1| carbamoyl-phosphate synthase large chain [Streptococcus equi subsp.
           zooepidemicus]
          Length = 1058

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   P+ +  ++++V  A S    +  P+ V
Sbjct: 133 KQLMKELGEPIPESEIVTTVEGAISFANAIGYPVIV 168


>gi|167465971|emb|CAP74004.1| putative carbamoyl-phosphate synthase [Streptococcus macedonicus]
          Length = 84

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 9  KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
          K L+   N P+ +  ++++V  A +  + +  P+ V
Sbjct: 44 KQLMEDLNQPIPESEIVNTVDEAVAFAELIGYPVIV 79


>gi|118475754|ref|YP_892417.1| phosphoribosylamine--glycine ligase [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414980|gb|ABK83400.1| phosphoribosylamine--glycine ligase [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 415

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L K  +  AK +   S   A   I +L   + VVK+     G+              
Sbjct: 105 KEFLAKNCIRTAKFINTDSYDEASKFIDSLSSTV-VVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  + +     + ++L      +  G  G     + VE+  D
Sbjct: 150 GVIIAKNHEEAKKAVLDML----SGESFGDAGK---RIIVEEFLD 187


>gi|56965387|ref|YP_177119.1| response regulator aspartate phosphatase [Bacillus clausii KSM-K16]
 gi|56911631|dbj|BAD66158.1| response regulator aspartate phosphatase [Bacillus clausii KSM-K16]
          Length = 365

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 6/96 (6%)

Query: 23  VVISSVHAAESAIKTLPGPLYVVKSQIHAGG--RGKGRFKELPADSKGGVRVESSLKSVI 80
              S +  A  A K L     VV  Q+  GG     G  K+     K  +    +  +  
Sbjct: 151 YAASHIEEALEAFKRLGFTERVVFCQVILGGIYSETGEHKKASLLFKEAMLAAGNHSTAK 210

Query: 81  SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILR 116
                 LG   + ++   +  R    Y E+   +  
Sbjct: 211 VIALRALGLNAVRQKNYRSAKR----YFEEALSVKE 242


>gi|32474086|ref|NP_867080.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Rhodopirellula baltica SH 1]
 gi|32444623|emb|CAD74625.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Rhodopirellula baltica SH 1]
          Length = 406

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 31/177 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  LR+  +PVA    +       +A + L  P+ V   +    G+G+ R          
Sbjct: 125 KTTLREAGIPVAGFEPVHDRETVVAAGEKLGWPIIVKTCRSGYDGKGQHRL--------- 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG-ADILRELYLSLLVDRT 127
                +S     S   E  G+     ++G  G      +V +      RE   S++V RT
Sbjct: 176 -----NSPDDAASV--EWAGA-----ESGGDGQPP---WVAEALVPFERE--ASVIVART 218

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-EDVASLCDMLELQGQA 183
                    T    + +       +      + P +   + E    + + L L G  
Sbjct: 219 LDQRV---ETFPVFENDHQNHILDETKLPADVSPEMETQAREIARRVAEHLGLVGLL 272


>gi|25028285|ref|NP_738339.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           efficiens YS-314]
 gi|259507343|ref|ZP_05750243.1| carbamoyl-phosphate synthase, large subunit [Corynebacterium
           efficiens YS-314]
 gi|81846929|sp|Q8FT42|CARB_COREF RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|23493569|dbj|BAC18539.1| putative carbamoyl-phosphate synthase large chain [Corynebacterium
           efficiens YS-314]
 gi|259165054|gb|EEW49608.1| carbamoyl-phosphate synthase, large subunit [Corynebacterium
           efficiens YS-314]
          Length = 1113

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            LL +  +P        S   A +    +  P+ V  S +  GGRG
Sbjct: 696 DLLGRAQLPAPAFGTAHSFEQARAVANEIGYPVLVRPSYVL-GGRG 740


>gi|312140619|ref|YP_004007955.1| alpha/beta hydrolase [Rhodococcus equi 103S]
 gi|325675754|ref|ZP_08155438.1| alpha/beta hydrolase fold family hydrolase [Rhodococcus equi ATCC
           33707]
 gi|311889958|emb|CBH49275.1| putative alpha/beta hydrolase [Rhodococcus equi 103S]
 gi|325553725|gb|EGD23403.1| alpha/beta hydrolase fold family hydrolase [Rhodococcus equi ATCC
           33707]
          Length = 261

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 8/106 (7%)

Query: 120 LSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIF-KLLIDPLIGVTSEDVASLCDMLE 178
           + +L +  +G V  +A + GG     +A+  P +I   +L+DP +G+  E+++ +  ++ 
Sbjct: 73  VGVLDEHATGPVVVVAHSYGGAIALHLAQAVPDRIRGIVLLDPALGLDPENMSRIAGLVA 132

Query: 179 LQGQARIDGGDLFPNLYKAFCD-----KDMSLLEINPLIIMKNGRL 219
                          L+ A+ D      D  L E   L+ + NGR+
Sbjct: 133 AYPDYTDAAEARSEKLHGAWADVPTEALDADLAE--HLVELDNGRV 176


>gi|240079943|ref|ZP_04724486.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           FA19]
 gi|268596082|ref|ZP_06130249.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           FA19]
 gi|268549870|gb|EEZ44889.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           FA19]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|229543897|ref|ZP_04432956.1| acetyl-CoA carboxylase, biotin carboxylase [Bacillus coagulans
           36D1]
 gi|229325036|gb|EEN90712.1| acetyl-CoA carboxylase, biotin carboxylase [Bacillus coagulans
           36D1]
          Length = 449

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           A+  ++K  VP+  G   ++     A+   K +  P+ ++K+
Sbjct: 119 ARETMKKAGVPIVPGSDGLVKDAEEAKVVAKKIGYPV-IIKA 159


>gi|169403178|emb|CAQ15961.1| putative biotin carboxylase [uncultured bacterium]
          Length = 159

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 9/47 (19%)

Query: 14 KYNVPVAKG-----VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
          ++ VP+  G      +      A    K +  P+ ++K+    GGRG
Sbjct: 48 EHGVPILPGTKGQREIC---DEARKIAKEIGFPV-IIKATAGGGGRG 90


>gi|167550940|ref|ZP_02344696.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205324292|gb|EDZ12131.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 554

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 85/268 (31%), Gaps = 51/268 (19%)

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINP 210
            I    +D   G+T   V  L + L    Q    G     +L +   +      L E N 
Sbjct: 67  AIRTEAVD--DGITQVIVRQLEEAL----QQLAQGSSGSQSLIQVRRWESACQKLPEANL 120

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD---VSEEDSREIEAKQHN-------- 259
            ++   G      +     + AL R L++    D   + +E   +  A+           
Sbjct: 121 ALVSVAGEYAAELA-----EQALDRSLNVMIFSDNVTLDDEIRLKRRARDKGLLVMGPDC 175

Query: 260 -----------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGA 303
                       + +  +GNIG +             I L G    + +     D+    
Sbjct: 176 GTAMIANTPLAFANVIPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEV 235

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                  A  I+++D   +   +  F      D + + I++A+K      P+V    G +
Sbjct: 236 GGISALTALDILSADEKSQ---VLAFVSKPPADAVRQHIIAAMKATG--KPVVALFLGFS 290

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKI 391
             +          NV  A  LD+AA+  
Sbjct: 291 SPVARE------ENVWFASTLDEAARLA 312


>gi|84368336|dbj|BAE69494.1| carbamoyl-phosphate synthase large chain [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 1090

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 47/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 139 RELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 189

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 190 G------IAYNREELIEIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 231

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T +    L D 
Sbjct: 232 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKVYQRLRDA 277


>gi|317163468|gb|ADV07009.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|296110449|ref|YP_003620830.1| phosphoribosylamine--glycine ligase [Leuconostoc kimchii IMSNU
           11154]
 gi|295831980|gb|ADG39861.1| phosphoribosylamine--glycine ligase [Leuconostoc kimchii IMSNU
           11154]
          Length = 414

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 6/111 (5%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL+KY++P AK   + S+ AAE  +KT   P+ V K    A G+G     +        
Sbjct: 110 ELLQKYDIPTAKSQTVHSLAAAEHVLKTFGLPI-VFKLDGLALGKGVTIIFDEAQAVTYL 168

Query: 70  VRVESSLKSVISDIREILGSTLITKQT--GPTGSRVNCVYVEDGADILREL 118
             +     + +  I E L     +  T  GP G+ V+        D  R  
Sbjct: 169 THLYQGNPTAVLVIEEYLEGVEFSIFTLVGPNGAMVHAPL---AQDHKRRF 216


>gi|240127438|ref|ZP_04740099.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268685811|ref|ZP_06152673.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626095|gb|EEZ58495.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|197248096|ref|YP_002145512.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197211799|gb|ACH49196.1| bacterial FdrA protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 554

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 85/268 (31%), Gaps = 51/268 (19%)

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINP 210
            I    +D   G+T   V  L + L    Q    G     +L +   +      L E N 
Sbjct: 67  AIRTEAVD--DGITQVIVRQLEEAL----QQLAQGSSGSQSLIQVRRWESACQKLPEANL 120

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD---VSEEDSREIEAKQHN-------- 259
            ++   G      +     + AL R L++    D   + +E   +  A+           
Sbjct: 121 ALVSVAGEYAAELA-----EQALDRSLNVMIFSDNVTLDDEIRLKRRARDKGLLVMGPDC 175

Query: 260 -----------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGA 303
                       + +  +GNIG +             I L G    + +     D+    
Sbjct: 176 GTAMIANTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEV 235

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                  A  I+++D   +   +  F      D + + I++A+K      P+V    G +
Sbjct: 236 GGISALTALDILSADEKSQ---VLAFVSKPPADAVRQHIIAAMKATG--KPVVALFLGFS 290

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKI 391
             +          NV  A  LD+AA+  
Sbjct: 291 SPVARE------ENVWFASTLDEAARLA 312


>gi|73989258|ref|XP_860279.1| PREDICTED: similar to propionyl-Coenzyme A carboxylase, alpha
           polypeptide precursor isoform 6 [Canis familiaris]
          Length = 557

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDSKTRRAMGEQAVALAKAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|289675668|ref|ZP_06496558.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 236

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|281421147|ref|ZP_06252146.1| phosphoribosylamine--glycine ligase [Prevotella copri DSM 18205]
 gi|281404682|gb|EFB35362.1| phosphoribosylamine--glycine ligase [Prevotella copri DSM 18205]
          Length = 422

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++N+P A+        V      ++TL  P YV+K+     G+           
Sbjct: 110 AKKFMKRHNIPTAQYETFDGEHVEEGLKFLETLKAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    + +E+LG           G+    V +E+      E  + +L D
Sbjct: 158 ---GVLILPTLEEAKKEFKEMLGGMF--------GNASARVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVA 132
             +  + 
Sbjct: 206 GKNYKIL 212


>gi|269965117|ref|ZP_06179264.1| phosphoribosylamine--glycine ligase [Vibrio alginolyticus 40B]
 gi|269830238|gb|EEZ84464.1| phosphoribosylamine--glycine ligase [Vibrio alginolyticus 40B]
          Length = 274

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHQIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|262403617|ref|ZP_06080175.1| protein acetyltransferase [Vibrio sp. RC586]
 gi|262350121|gb|EEY99256.1| protein acetyltransferase [Vibrio sp. RC586]
          Length = 893

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 94/262 (35%), Gaps = 29/262 (11%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL+ +N  V    + S    A    +T+  P+ V         + +       +D +G +
Sbjct: 501 LLKCFNFSVLPTWIASDSTEAVHIAETIGYPVAV---------KLRSPDIIHKSDVQGVM 551

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTS 128
               +   V +  + IL  T ++  +      ++ + V+  A +    EL + +  D T 
Sbjct: 552 LNLRNRVEVANAAQAILDRTQLSFPSAN----IHGLLVQGMAKLAGGEELRIKVKTDATF 607

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA--SLCDMLELQGQARID 186
           G V  +   QGG + +E + D    +  L I     +    +    +             
Sbjct: 608 GPVILLG--QGGSEWDE-SLDAAAALPPLNITLARYLIVRAIRNGKIRLQKLPVPIDIEG 664

Query: 187 GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKIS---FDDNALYRHLDIQEL 242
             +    + +   +  ++  L+I+PL++  + +  +LD+ +    F  +A  R      +
Sbjct: 665 LSEFLVRISQMVIECPEVHELDIHPLLVNGS-QFTILDANLVLRQFSGDAQNR----LAI 719

Query: 243 RDVSEEDSREIEAKQHNLSYIA 264
           R    E     +A+      + 
Sbjct: 720 RPYPTELEERCQARDGEWLTVR 741


>gi|271498815|ref|YP_003331840.1| phosphoribosylamine/glycine ligase [Dickeya dadantii Ech586]
 gi|270342370|gb|ACZ75135.1| phosphoribosylamine/glycine ligase [Dickeya dadantii Ech586]
          Length = 429

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L + ++P A+    + +  A   I+    P+ V+K+   A G+              
Sbjct: 109 KDFLARQHIPTAEYQNFTEIEPALEYIRRKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   +   ++L         G  G     + VE+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAENAATDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|257789813|ref|YP_003180419.1| phosphoribosylamine/glycine ligase [Eggerthella lenta DSM 2243]
 gi|317489272|ref|ZP_07947789.1| phosphoribosylamine-glycine ligase [Eggerthella sp. 1_3_56FAA]
 gi|325832245|ref|ZP_08165244.1| phosphoribosylamine--glycine ligase [Eggerthella sp. HGA1]
 gi|257473710|gb|ACV54030.1| phosphoribosylamine/glycine ligase [Eggerthella lenta DSM 2243]
 gi|316911673|gb|EFV33265.1| phosphoribosylamine-glycine ligase [Eggerthella sp. 1_3_56FAA]
 gi|325486081|gb|EGC88535.1| phosphoribosylamine--glycine ligase [Eggerthella sp. HGA1]
          Length = 430

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 23/123 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  +   ++P A+    + +  A + ++ L  P+ VVK+   A G+             
Sbjct: 107 SKKFMDANDIPTARYASFTDLEPALAYVRELGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V   L+     +R            G  G     V +E+         L+ + D  
Sbjct: 153 -GVVVADELEDAEDAVRSCFD--------GAFGDSGKTVLIEECLTGPECSMLAFVSDGK 203

Query: 128 SGM 130
           +  
Sbjct: 204 AHC 206


>gi|262202447|ref|YP_003273655.1| carbamoyl-phosphate synthase L chain ATP--binding protein [Gordonia
           bronchialis DSM 43247]
 gi|262085794|gb|ACY21762.1| Carbamoyl-phosphate synthase L chain ATP- binding protein [Gordonia
           bronchialis DSM 43247]
          Length = 1832

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 11/107 (10%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK +  +  VPVA      + +V  A++A   +  P  ++K+         G        
Sbjct: 124 AKLIAEEVGVPVAPWSRGAVDTVDEAKAAAAEIGYP-LMLKA-------TAGGGGRGIRV 175

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTG-SRVNCVYVEDG 111
                 +  + +    +     GS ++  +   TG   V    + DG
Sbjct: 176 VTNDADLVDAYERTRDEAARAFGSGIVFLERLVTGARHVEVQVIADG 222


>gi|206890668|ref|YP_002249529.1| acetyl-CoA carboxylase, biotin carboxylase [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742606|gb|ACI21663.1| acetyl-CoA carboxylase, biotin carboxylase [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 471

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 7   QAKALLRKYNVPVAKGVV-ISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +A+ + ++  +P+  G   ++S+  A  +   +  P+ ++K+    GGRG
Sbjct: 117 EARKIAQELGIPLLPGTPPLNSLDEAVKSADEIGYPV-MIKATAGGGGRG 165


>gi|154250339|ref|YP_001411164.1| phosphoribosylamine--glycine ligase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154275|gb|ABS61507.1| phosphoribosylamine--glycine ligase [Fervidobacterium nodosum
           Rt17-B1]
          Length = 410

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 21/94 (22%)

Query: 8   AKALLRKYNVPVAKGVVIS---SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  ++K+ +  A   + +   S++ A  A K    P YV+K+   A G+          
Sbjct: 100 AKTFMKKHGILTANFQIATDEISLYDALKAFK----PPYVIKADGLAQGK---------- 145

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGP 98
               GV +  +    +   ++++   LI    GP
Sbjct: 146 ----GVVICDTFDEAMDIGQKLIKGQLIPNVKGP 175


>gi|91226139|ref|ZP_01261029.1| putative acetyltransferase [Vibrio alginolyticus 12G01]
 gi|91189373|gb|EAS75651.1| putative acetyltransferase [Vibrio alginolyticus 12G01]
          Length = 877

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDDIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTS 128
               + + V +    IL +  ++  +      V+ + V+  A +    EL +S+ VD+  
Sbjct: 536 LNLRNSREVSNAALSILDTVKLSYPSAN----VHGLLVQGMAKLGSAEELRISIAVDKVF 591

Query: 129 GMVAFIASTQGGMDIE 144
           G V  +   QGG +  
Sbjct: 592 GPVILLG--QGGSEWN 605


>gi|88607473|ref|YP_505636.1| phosphoribosylamine--glycine ligase [Anaplasma phagocytophilum HZ]
 gi|88598536|gb|ABD44006.1| phosphoribosylamine--glycine ligase [Anaplasma phagocytophilum HZ]
          Length = 418

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +Y++P A+      ++AA+  +K    P  VVK+   A G+              
Sbjct: 107 KELCSRYHIPTARYGYFMDINAAKQYVKRSKLP-LVVKADGPAKGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +       +  +L         G  G   + V +E+  +  +EL    L+D T+
Sbjct: 152 GVVVCRTHDEAYDALESML-------VHGKFGKAGDAVVIEEFLE-GKELSFLTLIDGTN 203

Query: 129 GMVAFIASTQG 139
                + + Q 
Sbjct: 204 --PVVLGAVQD 212


>gi|57528264|ref|NP_001009653.1| methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
           [Rattus norvegicus]
 gi|81882966|sp|Q5I0C3|MCCA_RAT RecName: Full=Methylcrotonoyl-CoA carboxylase subunit alpha,
           mitochondrial; Short=MCCase subunit alpha; AltName:
           Full=3-methylcrotonyl-CoA carboxylase 1; AltName:
           Full=3-methylcrotonyl-CoA carboxylase biotin-containing
           subunit; AltName: Full=3-methylcrotonyl-CoA:carbon
           dioxide ligase subunit alpha; Flags: Precursor
 gi|56971894|gb|AAH88473.1| Methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) [Rattus
           norvegicus]
          Length = 715

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 64/215 (29%), Gaps = 31/215 (14%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K+++    VPV +G      S    +     +  P+ +           +G   +    
Sbjct: 162 SKSIMAAAGVPVVEGYHGNDQSDECLKEHAGKIGYPVMIKAI--------RGGGGKGMRI 213

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +     +  L+S   + ++      +               +E   D  R + + +  D
Sbjct: 214 IRSEKEFQEQLESARREAKKSFNDDAM--------------LIEKFVDTPRHVEVQVFGD 259

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQAR 184
                V      +    ++   +   ++     IDP +     E        +   G   
Sbjct: 260 HHGNAVYLF---ERDCSVQRRHQKIIEEAPAPGIDPEVRRRLGEAAVRAAKAVNYVGAGT 316

Query: 185 IDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
           ++   D   N Y  F + +  L   +P+  M  G 
Sbjct: 317 VEFIMDSKHNFY--FMEMNTRLQVEHPVTEMITGT 349


>gi|15789831|ref|NP_279655.1| phosphoribosylaminoimidazole carboxylase ATP binding subunit
           [Halobacterium sp. NRC-1]
 gi|10580223|gb|AAG19135.1| phosphoribosylaminoimidazole carboxylase ATP binding subunit
           [Halobacterium sp. NRC-1]
          Length = 364

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK---G 68
           L    +PV     +       +A + L  P  ++K +            +  AD++   G
Sbjct: 95  LADAGIPVPAFRAVDDAADLRAAFEELGAP-LMLKRRTGGYDGSGNAPVDSVADARAEFG 153

Query: 69  GVRVESSLKSVISDIREI 86
           G       + ++   RE+
Sbjct: 154 GDLGGFVAEELVDFEREL 171


>gi|21593483|gb|AAM65450.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana]
          Length = 341

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 45/141 (31%), Gaps = 14/141 (9%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA-DQDKVAAAFKIITSDSS 320
           YI   G IG +     L    +      G   +  + +GG   +        +    D  
Sbjct: 186 YIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQ 245

Query: 321 VKGI-LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE----SG 375
            +GI LI   GG    D         +KE   + P+V  + G     G R+       SG
Sbjct: 246 TEGIVLIGEIGGTAEEDAAAL-----IKENGTDKPVVAFIAGLTAPPGRRMGHAGAIVSG 300

Query: 376 LNVITAI---DLDDAAQKIVH 393
                      L DA  K+V 
Sbjct: 301 GKGTAQDKTKSLRDAGVKVVE 321


>gi|46849393|dbj|BAD17906.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Lepisosteus osseus]
          Length = 999

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K+ + ++ +P A+    +    A   I+    P  VVK+   A G+             
Sbjct: 94  SKSFMERHGIPTARWASFTDPQEACRFIQGAEFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V +  +     +R+I+
Sbjct: 141 -GVIVAADKEEACKAVRDIM 159


>gi|313669076|ref|YP_004049360.1| carbamoyl phosphate synthase large subunit [Neisseria lactamica
           ST-640]
 gi|313006538|emb|CBN88002.1| carbamoyl phosphate synthase large subunit [Neisseria lactamica
           020-06]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|313205940|ref|YP_004045117.1| carbamoyl-phosphate synthase large subunit [Riemerella
           anatipestifer DSM 15868]
 gi|312445256|gb|ADQ81611.1| carbamoyl-phosphate synthase large subunit [Riemerella
           anatipestifer DSM 15868]
 gi|315022253|gb|EFT35281.1| Carbamoyl-phosphate synthase large chain [Riemerella anatipestifer
           RA-YM]
 gi|325336619|gb|ADZ12893.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
           [Riemerella anatipestifer RA-GD]
          Length = 1060

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           + L+R+   PV +  ++++V  A +   T+  P+ V
Sbjct: 132 RELMRELGEPVPESDIVNTVEQALNFANTIGYPVIV 167


>gi|300858548|ref|YP_003783531.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686002|gb|ADK28924.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206261|gb|ADL10603.1| Carbamoyl-phosphate synthase large chain [Corynebacterium
           pseudotuberculosis C231]
 gi|302330819|gb|ADL21013.1| Carbamoyl-phosphate synthase large chain [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276503|gb|ADO26402.1| Carbamoyl-phosphate synthase large chain [Corynebacterium
           pseudotuberculosis I19]
          Length = 1120

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           L+   +P  +    +S   A+     +  P+ V  S +  GGRG
Sbjct: 698 LKAAQLPAPEFGTATSFEDAKEVASRIGYPVLVRPSYVL-GGRG 740


>gi|283782077|ref|YP_003372832.1| succinyl-CoA synthetase, alpha subunit [Pirellula staleyi DSM 6068]
 gi|283440530|gb|ADB18972.1| succinyl-CoA synthetase, alpha subunit [Pirellula staleyi DSM 6068]
          Length = 293

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 27/157 (17%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ-DKVAAAFKIITSDSS 320
           YI   GN+G M     L    +      G   +  + +GG           FK+  +D  
Sbjct: 141 YIHKPGNVGIMSRSGTLTYEAVWQTTGLGLGQSTCVGLGGDPIVGTNYIDLFKLYEADPQ 200

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL---------- 370
            + IL+     I       +   +A  +  +  P+   + G     G R+          
Sbjct: 201 TEAILM-----IGEIGGTAEEEAAAYVKAHVTKPVAAFIAGRTAPPGRRMGHAGAIISGG 255

Query: 371 ----------IAESGLNVITA-IDLDDAAQKIVHAVK 396
                     + ++G+ V  +   + +A Q+ +   K
Sbjct: 256 KGTAAEKVAALEDAGIEVADSPATMGEAVQRAIAKKK 292


>gi|119025204|ref|YP_909049.1| D-alanyl-alanine synthetase A [Bifidobacterium adolescentis ATCC
           15703]
 gi|166198475|sp|A0ZZT4|DDL_BIFAA RecName: Full=D-alanine--D-alanine ligase; AltName:
           Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine
           synthetase
 gi|118764788|dbj|BAF38967.1| D-alanine-D-alanine ligase [Bifidobacterium adolescentis ATCC
           15703]
          Length = 378

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 28/216 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAE-SAIKTLPGPLYVVKSQI-HAGGRGKGRFKELPADS 66
           K LL    +PVA G+   ++ A               + +Q+  AG +     K   A S
Sbjct: 149 KVLLAAAGIPVAPGI---TLDARSFDKASEFKTDADAIMAQVSEAGLQYPLFVKPSRAGS 205

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             GV               +                   + VE G D  RE+  ++L  +
Sbjct: 206 SFGVTKVEHEGDAAELAAAV----------YEASRHDWRILVEQGID-AREIECAVLCPK 254

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                   AS  G + +++ A+           D      S+ + +    +E+      +
Sbjct: 255 AGEAPQ--ASWPGEIVLDKRAEGD---------DQFYDFDSKYMDAAASHVEVPANLPEE 303

Query: 187 GGDLFPNLY-KAFCDKDMSLLEINPLIIMKNGRLRV 221
             +L      KAF   D + L      + K+G++ V
Sbjct: 304 TLNLVRETAKKAFVAVDGAGLSRVDTFVTKDGKVMV 339


>gi|110680056|ref|YP_683063.1| acetyl-CoA carboxylase biotin carboxylase subunit [Roseobacter
           denitrificans OCh 114]
 gi|109456172|gb|ABG32377.1| acetyl-CoA carboxylase, biotin carboxylase [Roseobacter
           denitrificans OCh 114]
          Length = 450

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  ++   VP V    G V  ++  A+     +  P+ ++K+    GGRG    +    
Sbjct: 119 AKETMKNLGVPCVPGSDGGVA-TLEEAQRIGAEIGYPV-IIKATAGGGGRGMKVAQNAEE 176

Query: 65  DSKG 68
             K 
Sbjct: 177 MEKA 180


>gi|70606099|ref|YP_254969.1| pyruvate carboxylase subunit A [Sulfolobus acidocaldarius DSM 639]
 gi|68566747|gb|AAY79676.1| pyruvate carboxylase subunit A [Sulfolobus acidocaldarius DSM 639]
          Length = 510

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
             K L +   VP++ G    + ++  A      +  P+ V K+    GG G
Sbjct: 120 DGKRLAKASGVPISPGSDGPVENLDEAIKIADRIGYPIMV-KAAYGGGGTG 169


>gi|46849465|dbj|BAD17942.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Potamotrygon motoro]
          Length = 997

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++++P A+    +    A + I+    P  VVK+   A G+             
Sbjct: 94  AKEFMDRHDIPTARWKAFTDAGEACTFIQRAEFPALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V ++ +     I++I+
Sbjct: 141 -GVIVAANKEEACKAIQDIM 159


>gi|14590236|ref|NP_142302.1| phosphoribosylglycinamide formyltransferase 2 [Pyrococcus
           horikoshii OT3]
 gi|88192722|pdb|2CZG|A Chain A, Crystal Structure Of Probable Phosphoribosylglycinamide
           Formyl Transferase (Ph0318) From Pyrococcus Horikoshii
           Ot3
 gi|88192723|pdb|2CZG|B Chain B, Crystal Structure Of Probable Phosphoribosylglycinamide
           Formyl Transferase (Ph0318) From Pyrococcus Horikoshii
           Ot3
 gi|134104146|pdb|2DWC|A Chain A, Crystal Structure Of Probable Phosphoribosylglycinamide
           Formyl Transferase From Pyrococcus Horikoshii Ot3
           Complexed With Adp
 gi|134104147|pdb|2DWC|B Chain B, Crystal Structure Of Probable Phosphoribosylglycinamide
           Formyl Transferase From Pyrococcus Horikoshii Ot3
           Complexed With Adp
 gi|3256709|dbj|BAA29392.1| 433aa long hypothetical phosphoribosylglycinamide formyl
           transferase [Pyrococcus horikoshii OT3]
          Length = 433

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  VP ++ +  +++     A + +  P +  K+ + + G+G   F + P D     
Sbjct: 128 LVKEAKVPTSRYMYATTLDELYEACEKIGYPCH-TKAIMSSSGKG-SYFVKGPEDIPKAW 185

Query: 71  RVESSLKSVISDIREIL 87
               +         +I+
Sbjct: 186 EEAKTK--ARGSAEKII 200


>gi|90426002|ref|YP_534372.1| allophanate hydrolase subunit 2 [Rhodopseudomonas palustris BisB18]
 gi|90108016|gb|ABD90053.1| Allophanate hydrolase subunit 2 [Rhodopseudomonas palustris BisB18]
          Length = 1183

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 76/226 (33%), Gaps = 37/226 (16%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L +  NVP+  G  ++ ++  A    + +  P  ++KS    GG G     +   
Sbjct: 117 HKARELAQHSNVPLLPGSGLLETIDEAMREAERIGFP-LMLKSTAGGGGIGMQLCHDADT 175

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +    V+ + K+   D                       VY+E      R + + +  
Sbjct: 176 LRERFATVQRTAKASFGDA---------------------RVYLERFVAEARHIEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQA 183
           D    ++A       G     + +   + I +    P  G++ E    L    + L    
Sbjct: 215 DGQGKVIAL------GERDCSLQRRNQKVIEET---PAPGLSDELRTRLHRAAVALGESV 265

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
                     +Y    + D   LE+N  + +++    V ++    D
Sbjct: 266 AYQSAGTVEFIYDVARE-DFYFLEVNTRLQVEHP---VTEAVFGVD 307


>gi|325920186|ref|ZP_08182145.1| acyl-CoA synthetase (NDP forming) [Xanthomonas gardneri ATCC 19865]
 gi|325549326|gb|EGD20221.1| acyl-CoA synthetase (NDP forming) [Xanthomonas gardneri ATCC 19865]
          Length = 902

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 25/227 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +P+    V ++ + A      L      V  ++ +            +D  G 
Sbjct: 497 RLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSND------IAHKSDVDGV 550

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDRT 127
               SS+ +V      IL       +     + ++ V V+        REL   +  D  
Sbjct: 551 RLNLSSVAAVREAAAGILAR----ARAAQPDAVIDGVIVQPTVLRPKARELIAGIADDPV 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-----PLIGVTSEDVASLCDMLELQGQ 182
            G        +GG  +E +     +++    +D      LIG T      L    ++   
Sbjct: 607 FGPAIVFG--RGGTAVEVIND---RELALPPLDLRLAHELIGRT-RVSRILKAYRDVPAA 660

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  +   L +   D  +++ L+INPL+  ++G +  LD++++ 
Sbjct: 661 DERAVALVLVKLAQLAADIPEITELDINPLLADRDG-VIALDARVAV 706


>gi|300214099|gb|ADJ78515.1| Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain) [Lactobacillus salivarius CECT
           5713]
          Length = 1061

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N PV     + +V  A      +  P+ V
Sbjct: 133 KDLMQELNEPVPDSKTVETVQEALDFAAEIGYPVIV 168


>gi|326204298|ref|ZP_08194157.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           papyrosolvens DSM 2782]
 gi|325985573|gb|EGD46410.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           papyrosolvens DSM 2782]
          Length = 1070

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL   ++P+ +G    S   ++     +  P+ V  S +  G
Sbjct: 676 KLLESLDIPIPEGNTAFSFQHSKEIANKIGYPVLVRPSYVLGG 718


>gi|226314884|ref|YP_002774780.1| arginine-specific carbamoyl-phosphate synthase large chain
           [Brevibacillus brevis NBRC 100599]
 gi|226097834|dbj|BAH46276.1| arginine-specific carbamoyl-phosphate synthase large chain
           [Brevibacillus brevis NBRC 100599]
          Length = 1080

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++   PV +   + SV AA      +  P+ V
Sbjct: 133 KQLMQQIGEPVPESDTVESVEAAIEFANAIGYPVIV 168


>gi|109121193|ref|XP_001092670.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           [Macaca mulatta]
          Length = 728

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEVQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|90961175|ref|YP_535091.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           salivarius UCC118]
 gi|122449391|sp|Q1WVA9|CARB_LACS1 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|90820369|gb|ABD99008.1| Carbamoyl-phosphate synthase large chain [Lactobacillus salivarius
           UCC118]
          Length = 1061

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N PV     + +V  A      +  P+ V
Sbjct: 133 KDLMQELNEPVPDSKTVETVQEALDFAAEIGYPVIV 168


>gi|332557627|ref|ZP_08411949.1| propionyl-CoA carboxylase, alpha subunit [Rhodobacter sphaeroides
           WS8N]
 gi|332275339|gb|EGJ20654.1| propionyl-CoA carboxylase, alpha subunit [Rhodobacter sphaeroides
           WS8N]
          Length = 666

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L ++  V    G   +I+    A      +  P+ +  S                  
Sbjct: 119 SKKLAKEAGVSTVPGYMGLIADADEAVKISNEIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   V             +K         + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWSEAEVKEGFE-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
           +    V      +    I+   +   ++     +D        E   +L   +       
Sbjct: 217 KHGNCVYL---HERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQACALAKAVGYASAGT 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D   N Y  F + +  L   +P+  +  G
Sbjct: 274 VEFIVDGQKNFY--FLEMNTRLQVEHPVTELITG 305


>gi|319639060|ref|ZP_07993817.1| carbamoyl-phosphate synthase large subunit [Neisseria mucosa C102]
 gi|317399638|gb|EFV80302.1| carbamoyl-phosphate synthase large subunit [Neisseria mucosa C102]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|315640850|ref|ZP_07895949.1| carbamoyl-phosphate synthase, large subunit [Enterococcus italicus
           DSM 15952]
 gi|315483389|gb|EFU73886.1| carbamoyl-phosphate synthase, large subunit [Enterococcus italicus
           DSM 15952]
          Length = 1049

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++  +P  +G   ++   A +  K +  P+ V  S +  G
Sbjct: 658 DLFE-QA---LKELEIPQPEGDTATNKEDAVAIAKRIGFPVLVRPSYVLGG 704


>gi|306922570|gb|ADN07458.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase [Microtus ochrogaster]
          Length = 2223

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|301755962|ref|XP_002913816.1| PREDICTED: LOW QUALITY PROTEIN: CAD protein-like [Ailuropoda
           melanoleuca]
          Length = 2221

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|297667979|ref|XP_002812234.1| PREDICTED: CAD protein-like [Pongo abelii]
          Length = 2225

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|296224282|ref|XP_002757976.1| PREDICTED: CAD protein [Callithrix jacchus]
          Length = 2197

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 501 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 541


>gi|291295264|ref|YP_003506662.1| ATP-dependent carboxylate-amine ligase domain-containing protein
           ATP-grasp [Meiothermus ruber DSM 1279]
 gi|290470223|gb|ADD27642.1| ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
           [Meiothermus ruber DSM 1279]
          Length = 386

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           K   ++  + VA+G +  S   A+  ++ +  P+ V K  I  G
Sbjct: 117 KRYFQQAGLRVARGRICRSAVEAQDFVEEVGYPV-VAKPDIGVG 159


>gi|261379319|ref|ZP_05983892.1| carbamoyl-phosphate synthase, large subunit [Neisseria subflava
           NJ9703]
 gi|284797755|gb|EFC53102.1| carbamoyl-phosphate synthase, large subunit [Neisseria subflava
           NJ9703]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|261401908|ref|ZP_05988033.1| carbamoyl-phosphate synthase, large subunit [Neisseria lactamica
           ATCC 23970]
 gi|269207923|gb|EEZ74378.1| carbamoyl-phosphate synthase, large subunit [Neisseria lactamica
           ATCC 23970]
          Length = 1071

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|219518475|gb|AAI44973.1| Cad protein [Mus musculus]
          Length = 2154

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|168275808|dbj|BAG10624.1| CAD protein [synthetic construct]
          Length = 2162

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|158534057|ref|NP_001099180.2| CAD protein [Rattus norvegicus]
          Length = 2225

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|149050762|gb|EDM02935.1| carbamyl phosphatate synthetase 2 (mapped), isoform CRA_a [Rattus
           norvegicus]
          Length = 1524

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 209 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 249


>gi|149050763|gb|EDM02936.1| carbamyl phosphatate synthetase 2 (mapped), isoform CRA_b [Rattus
           norvegicus]
          Length = 1528

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 609 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 649


>gi|149050766|gb|EDM02939.1| carbamyl phosphatate synthetase 2 (mapped), isoform CRA_e [Rattus
           norvegicus]
          Length = 2304

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 601 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 641


>gi|149050765|gb|EDM02938.1| carbamyl phosphatate synthetase 2 (mapped), isoform CRA_d [Rattus
           norvegicus]
          Length = 2312

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 601 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 641


>gi|148705380|gb|EDL37327.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_a [Mus musculus]
          Length = 1394

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 530 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 570


>gi|148705383|gb|EDL37330.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_d [Mus musculus]
          Length = 2234

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 523 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 563


>gi|148705381|gb|EDL37328.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_b [Mus musculus]
          Length = 1381

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 542 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 582


>gi|126303078|ref|XP_001371124.1| PREDICTED: similar to carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase [Monodelphis domestica]
          Length = 2220

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 519 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 559


>gi|114576579|ref|XP_525720.2| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase isoform 7 [Pan
           troglodytes]
          Length = 2242

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|114576589|ref|XP_001154952.1| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase isoform 2 [Pan
           troglodytes]
          Length = 1838

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|114576583|ref|XP_001155225.1| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase isoform 5 [Pan
           troglodytes]
          Length = 2232

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|114576587|ref|XP_001155167.1| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase isoform 4 [Pan
           troglodytes]
          Length = 2191

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|114576581|ref|XP_001155357.1| PREDICTED: CAD protein isoform 6 [Pan troglodytes]
          Length = 2225

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|114576591|ref|XP_001154901.1| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase isoform 1 [Pan
           troglodytes]
          Length = 1801

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|114576585|ref|XP_001155009.1| PREDICTED: carbamoylphosphate synthetase 2/aspartate
           transcarbamylase/dihydroorotase isoform 3 [Pan
           troglodytes]
          Length = 2257

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|51093867|ref|NP_076014.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase [Mus musculus]
 gi|148705382|gb|EDL37329.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_c [Mus musculus]
 gi|187950817|gb|AAI37857.1| Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase [Mus musculus]
          Length = 2225

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|31418608|gb|AAH53097.1| Cad protein [Mus musculus]
          Length = 1019

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 570 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 610


>gi|191333|gb|AAA37062.1| carbamoyl-phosphate synthetase (E.C.6.3.5.5) [Mesocricetus auratus]
          Length = 1300

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 367 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 407


>gi|62988906|gb|AAY24293.1| unknown [Homo sapiens]
          Length = 2151

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 448 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 488


>gi|18105007|ref|NP_004332.2| CAD protein [Homo sapiens]
 gi|50403731|sp|P27708|PYR1_HUMAN RecName: Full=CAD protein; Includes: RecName:
           Full=Glutamine-dependent carbamoyl-phosphate synthase;
           Includes: RecName: Full=Aspartate carbamoyltransferase;
           Includes: RecName: Full=Dihydroorotase
 gi|41351087|gb|AAH65510.1| Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase [Homo sapiens]
 gi|119621017|gb|EAX00612.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_a [Homo sapiens]
 gi|119621018|gb|EAX00613.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_a [Homo sapiens]
 gi|119621019|gb|EAX00614.1| carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and
           dihydroorotase, isoform CRA_a [Homo sapiens]
          Length = 2225

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|131696|sp|P08955|PYR1_MESAU RecName: Full=CAD protein; Includes: RecName:
           Full=Glutamine-dependent carbamoyl-phosphate synthase;
           Includes: RecName: Full=Aspartate carbamoyltransferase;
           Includes: RecName: Full=Dihydroorotase
          Length = 2225

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 522 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 562


>gi|84393072|ref|ZP_00991838.1| phosphoribosylamine--glycine ligase [Vibrio splendidus 12B01]
 gi|84376324|gb|EAP93206.1| phosphoribosylamine--glycine ligase [Vibrio splendidus 12B01]
          Length = 429

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++++P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHDIPTGYYSNFTEIEPAIAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  +   E    ++VD +S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGSS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|326408927|gb|ADZ65992.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis M28]
 gi|326538643|gb|ADZ86858.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella melitensis
           M5-90]
          Length = 413

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 79  EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 133

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 134 SAEELPIALATARSEAGAA 152


>gi|120435103|ref|YP_860789.1| cyanophycin synthetase [Gramella forsetii KT0803]
 gi|117577253|emb|CAL65722.1| cyanophycin synthetase [Gramella forsetii KT0803]
          Length = 895

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 14/106 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL++  + V +G  + +V   +SA+ +L  PL +           K            
Sbjct: 221 KYLLQQAAIKVPEGESVRNVEELKSAVNSLGFPLAI-----------KPTDGNHGRGITS 269

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSR---VNCVYVEDG 111
           G++      S   +  +I  + L+ K       R   VN   V   
Sbjct: 270 GIQNMEEAISAFHNAEKISNNILVEKHISGADYRLLVVNFKLVAAA 315


>gi|329120046|ref|ZP_08248716.1| carbamoyl-phosphate synthase, large subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327463577|gb|EGF09895.1| carbamoyl-phosphate synthase, large subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 1069

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|301299457|ref|ZP_07205733.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|300852939|gb|EFK80547.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 1061

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N PV     + +V  A      +  P+ V
Sbjct: 133 KDLMQELNEPVPDSKTVETVQEALDFAAEIGYPVIV 168


>gi|291453679|ref|ZP_06593069.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces albus J1074]
 gi|291356628|gb|EFE83530.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Streptomyces albus J1074]
          Length = 402

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 65/265 (24%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  +++      +  +   G   V+K+ +  G  GK            GV 
Sbjct: 133 LTEIGAPCPRHRIVADPADVAAFAEEGDGFPVVLKT-VRGGYDGK------------GVW 179

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+     REL  +++      + 
Sbjct: 180 VVRSEADAAEPFR--------------AGVPV---LAEEMVPFRRELAANIVRSPHGQAV 222

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQGQ 182
               + S Q               +   +I P  G++        E    + D L + G 
Sbjct: 223 AYPVVESRQVDG------------VCDTVIAPAPGLSEELSGQAQELALRIADELGVVGH 270

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSKISFDDNALYRHLDIQ 240
             ++           F  +D  +L +N L +    +G   +  +  S   N +   LD+ 
Sbjct: 271 LAVE----------LFETEDGRVL-VNELAMRPHNSGHWTMDGAVTSQFANHVRAVLDLP 319

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL 265
            L D        +        Y  +
Sbjct: 320 -LGDPRPRAPWTVMCNVLGGDYPDM 343


>gi|240117100|ref|ZP_04731162.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           PID1]
 gi|240124927|ref|ZP_04737813.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|268602785|ref|ZP_06136952.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           PID1]
 gi|268683505|ref|ZP_06150367.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           SK-92-679]
 gi|268586916|gb|EEZ51592.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           PID1]
 gi|268623789|gb|EEZ56189.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           SK-92-679]
          Length = 1071

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|226354884|ref|YP_002784624.1| carbamoyl phosphate synthase large subunit [Deinococcus deserti
           VCD115]
 gi|259585678|sp|C1CXR4|CARB_DEIDV RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|226316874|gb|ACO44870.1| putative Carbamoyl-phosphate synthase large chain (Carbamoyl-
           phosphate synthetase ammonia chain) [Deinococcus deserti
           VCD115]
          Length = 1029

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 31/134 (23%)

Query: 9   KALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L     +K  V  A+G ++ S+  A    K +  P+ +         R          
Sbjct: 129 RELFQAAMKKIGVETARGKMVHSMEEAVEYQKEIGLPIVI---------RPSFTLGGTGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +             L   + G   S V  V +E+     +E  L ++ 
Sbjct: 180 G------IAHTYEEF-----------LAITEGGLRDSPVTSVLLEESILGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           D  +  V  I S +
Sbjct: 223 DT-ADTVIIITSIE 235


>gi|261378475|ref|ZP_05983048.1| carbamoyl-phosphate synthase, large subunit [Neisseria cinerea ATCC
           14685]
 gi|269145269|gb|EEZ71687.1| carbamoyl-phosphate synthase, large subunit [Neisseria cinerea ATCC
           14685]
          Length = 1071

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|189463098|ref|ZP_03011883.1| hypothetical protein BACCOP_03800 [Bacteroides coprocola DSM 17136]
 gi|189430077|gb|EDU99061.1| hypothetical protein BACCOP_03800 [Bacteroides coprocola DSM 17136]
          Length = 503

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 27/148 (18%)

Query: 16  NVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
            VPV  G    + SV  A+     +  P+ ++K+ +  GG+              G+R+ 
Sbjct: 127 GVPVVPGTEQPLQSVEEAKEICNRIGYPV-MLKASMGGGGK--------------GMRLI 171

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            S   V         +T  ++     G   + VY+E   +    +   +L D     V  
Sbjct: 172 HSESEVEEAY-----NTARSESMSSFGD--DTVYLEKFVEEPHHIEFQILGDNYGNAVHL 224

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDP 161
               +    I+   +   ++     + P
Sbjct: 225 F---ERECSIQRRNQKIVEETPSPFVTP 249


>gi|162319798|ref|YP_451768.2| carbamoyl phosphate synthase large subunit [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 1080

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 47/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPKAAVAHTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIEIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T +    L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKVYQRLRDA 267


>gi|59800515|ref|YP_207227.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           FA 1090]
 gi|293397753|ref|ZP_06641959.1| carbamoyl-phosphate synthase, large subunit [Neisseria gonorrhoeae
           F62]
 gi|59717410|gb|AAW88815.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           FA 1090]
 gi|291611699|gb|EFF40768.1| carbamoyl-phosphate synthase, large subunit [Neisseria gonorrhoeae
           F62]
          Length = 1071

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|189499506|ref|YP_001958976.1| phosphoribosylamine--glycine ligase [Chlorobium phaeobacteroides
           BS1]
 gi|189494947|gb|ACE03495.1| phosphoribosylamine/glycine ligase [Chlorobium phaeobacteroides
           BS1]
          Length = 426

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 14/85 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +++Y++P A   V S   +A + ++       V+K+   A G+             
Sbjct: 109 AKDFMKRYDIPTASYSVFSDYDSARAFLENTTVFPQVIKASGLAAGK------------- 155

Query: 68  GGVRVESSLKSVISDIREILGSTLI 92
            GV V  +    +  I ++    + 
Sbjct: 156 -GVIVAENRDQAMQAIEDLFRKRIF 179


>gi|260902130|ref|ZP_05910525.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus AQ4037]
 gi|308109943|gb|EFO47483.1| acetyltransferase, GNAT family [Vibrio parahaemolyticus AQ4037]
          Length = 877

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDEIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTS 128
               + + V +  + IL +   +  +      ++ + V+  A +    EL +S+ VD+  
Sbjct: 536 LNLRNSREVSNAAQSILDTVKFSYPSAN----IHGLLVQGMAKLGSAEELRISIAVDKVF 591

Query: 129 GMVAFIASTQGGMDIE 144
           G V  +   QGG +  
Sbjct: 592 GPVILLG--QGGSEWN 605


>gi|226304927|ref|YP_002764885.1| glycinamide ribonucleotide transformylase PurT [Rhodococcus
           erythropolis PR4]
 gi|226184042|dbj|BAH32146.1| glycinamide ribonucleotide transformylase PurT [Rhodococcus
           erythropolis PR4]
          Length = 411

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 28/105 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      S+   ++A   +  P  V+K  + + G+G+             VR    
Sbjct: 140 GLPTSPYAFADSLAEVQAATDRIGFPC-VIKPVMSSSGKGQST-----------VRSAED 187

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVN--CVYVEDGADILREL 118
           L +                     G RVN   V VE   D   E+
Sbjct: 188 LDAAWDYAM--------------AGGRVNHGRVIVEGFVDFDYEI 218


>gi|29831564|ref|NP_826198.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces avermitilis MA-4680]
 gi|29608680|dbj|BAC72733.1| putative phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces avermitilis MA-4680]
          Length = 407

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 49/185 (26%), Gaps = 47/185 (25%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            VP  +  ++  V    +      G   ++K+ +  G  GK            GV    S
Sbjct: 138 GVPSPRHRIVRDVDDVAAFAAEGDGFPVILKT-VRGGYDGK------------GVWFVRS 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
            +      R               G  V     E+  D +REL  +++            
Sbjct: 185 AEEAEDPFR--------------AGVPV---LAEEKVDFVRELAANVVRSPHGQ------ 221

Query: 136 STQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQGQARIDGG 188
                +    V       +   +I P  G++             +   L + G   ++  
Sbjct: 222 ----AVAYPVVESQQVDGVCDTVIAPAPGISDELALEAEALALRIAKELGVVGHLAVELF 277

Query: 189 DLFPN 193
           +    
Sbjct: 278 ETVTA 282


>gi|73989252|ref|XP_534175.2| PREDICTED: similar to propionyl-Coenzyme A carboxylase, alpha
           polypeptide precursor isoform 2 [Canis familiaris]
          Length = 731

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 179 ESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 223

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 224 GGGKGMRIAWDDEETRDGFR-------FSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLG 276

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 277 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDSKTRRAMGEQAVALAKAVKYSSAG 333

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 334 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 366


>gi|332188543|ref|ZP_08390263.1| carbamoyl-phosphate synthase L chain, N-terminal domain protein
           [Sphingomonas sp. S17]
 gi|332011448|gb|EGI53533.1| carbamoyl-phosphate synthase L chain, N-terminal domain protein
           [Sphingomonas sp. S17]
          Length = 665

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 28/177 (15%)

Query: 7   QAKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V V  G +  I+    A      +  P+ +  S                 
Sbjct: 118 ESKKLAKAAGVNVVPGYLGEIADTEEAVRIASDIGFPVMMKAS---------------AG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+  S   V             TK+ G      + V++E   +  R + + +L 
Sbjct: 163 GGGKGMRLAWSEADVREGFEA-------TKREGLASFGDDRVFIEKFIESPRHIEIQVLG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQ 180
           D+  G + ++   +    I+   +   ++     + P +     E   +L   +   
Sbjct: 216 DQH-GNIVYLGERE--CSIQRRHQKVVEEAPSPFVTPEMRRAMGEQAVALARAVGYY 269


>gi|240013361|ref|ZP_04720274.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           DGI18]
 gi|240120434|ref|ZP_04733396.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           PID24-1]
          Length = 1071

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|227891888|ref|ZP_04009693.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           salivarius ATCC 11741]
 gi|227866351|gb|EEJ73772.1| carbamoyl phosphate synthase large subunit [Lactobacillus
           salivarius ATCC 11741]
          Length = 1076

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+++ N PV     + +V  A      +  P+ V
Sbjct: 148 KDLMQELNEPVPDSKTVETVQEALDFAAEIGYPVIV 183


>gi|198432238|ref|XP_002131093.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 1021

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++ +P A+  + +    A   I T P    VVK+   A G+             
Sbjct: 110 AKEFMIRHGIPTARYEIFTDCETACHHINTAPYRALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGS 89
            GV V  +       +R +L +
Sbjct: 157 -GVVVAKNKIEACEAVRNMLNN 177


>gi|34496002|ref|NP_900217.1| phosphoribosylamine-glycine ligase [Chromobacterium violaceum ATCC
           12472]
 gi|34101855|gb|AAQ58223.1| phosphoribosylamine-glycine ligase [Chromobacterium violaceum ATCC
           12472]
          Length = 425

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P   G    +  AA        G   V+K+   A G+             
Sbjct: 106 AKAFMQRHGIPT-AGYQTFTDAAAAHGYVDGKGAPIVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + I ++L    +  + G  G   + V +ED   +  E    ++VD  
Sbjct: 152 -GVVVAMTLDEAHAAIDDML----LGNKMGEAG---SRVVIEDFL-VGEEASFIVMVDGE 202

Query: 128 SGMVA 132
             +  
Sbjct: 203 HVLPM 207


>gi|18976802|ref|NP_578159.1| phosphoribosylglycinamide formyltransferase 2 [Pyrococcus furiosus
           DSM 3638]
 gi|74580812|sp|Q8U3M7|PURT_PYRFU RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|18892397|gb|AAL80554.1| phosphoribosylglycinamide formyltransferase 2 [Pyrococcus furiosus
           DSM 3638]
          Length = 429

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 24/108 (22%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  VP ++ +  +++     A + +  P +  K+ + + G+G   F   P D     
Sbjct: 125 LVKEAKVPTSRYMYATTLDELYEACEKIGYPCH-TKAIMSSSGKG-SYFVRGPED----- 177

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            +  + +   +  R                     + VE+  D   E+
Sbjct: 178 -IPKAWEEAKTKAR----------------GSAEKIIVEEHIDFDVEI 208


>gi|15615099|ref|NP_243402.1| carbamoyl phosphate synthase large subunit [Bacillus halodurans
           C-125]
 gi|22095534|sp|Q9K9V9|CARB_BACHD RecName: Full=Carbamoyl-phosphate synthase pyrimidine-specific
           large chain; AltName: Full=Carbamoyl-phosphate
           synthetase ammonia chain
 gi|10175156|dbj|BAB06255.1| carbamoyl-phosphate synthetase (catalytic subunit) [Bacillus
           halodurans C-125]
          Length = 1062

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           N+P   G   +S+  A    + +  P+ V  S +  G
Sbjct: 678 NIPQPLGDTATSIEEARQIAERIGYPVLVRPSYVLGG 714


>gi|323691569|ref|ZP_08105833.1| carbamoyl-phosphate synthase large subunit [Clostridium symbiosum
           WAL-14673]
 gi|323504362|gb|EGB20160.1| carbamoyl-phosphate synthase large subunit [Clostridium symbiosum
           WAL-14673]
          Length = 1087

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 64/220 (29%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +   PV    V+++V AA +  + +  P+ V  +    G               G
Sbjct: 123 KDTMEEIGEPVIPSEVVTTVDAAMAFAEKIGFPVIVRPAFTLGG------------TGGG 170

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             +    L  + +      G  L           ++ + VE      +E+   ++  R S
Sbjct: 171 IAKTRRELDEIATA-----GIRLS---------PIHQILVEKCIAGWKEIEFEVM--RDS 214

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                   +    D   V       I   +I P + +  ++         ++   + ++G
Sbjct: 215 VGNEITVCSMENFDP--VGIHTGDSI---VIAPAVTLADKEYQMLRSAALNIIQAMGIEG 269

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
                      +   A  + +  +   + L     G    
Sbjct: 270 GCNCQFALNPESFEYAVIEVNPRVSRSSALASKATGYPIA 309


>gi|317494898|ref|ZP_07953308.1| phosphoribosylamine-glycine ligase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917086|gb|EFV38435.1| phosphoribosylamine-glycine ligase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 427

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + +  A S I++   P+ V+K+   A G+              
Sbjct: 109 KDFLARHRIPTAEYRNFTDIEPAISYIRSQGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   + + ++L         G  G     + VE+  +   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEAAVHDMLA----GNAFGDAGH---RIVVEEFLE-GEEASFIVMVDGKN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|325673904|ref|ZP_08153594.1| phosphoribosylglycinamide formyltransferase 2 [Rhodococcus equi
           ATCC 33707]
 gi|325555169|gb|EGD24841.1| phosphoribosylglycinamide formyltransferase 2 [Rhodococcus equi
           ATCC 33707]
          Length = 404

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 28/107 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      S+    +A + +  P  V+K  + + G+G+               V  S
Sbjct: 136 GLPTSPYAFADSLDEVRAATERIGFPC-VIKPVMSSSGKGQS--------------VARS 180

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNC--VYVEDGADILRELYL 120
           +  + +           + +   +G RVN   V VE   D   E+ L
Sbjct: 181 VDDLEN-----------SWEYALSGGRVNKGRVIVEGFVDFDYEITL 216


>gi|239998178|ref|ZP_04718102.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           35/02]
 gi|240015805|ref|ZP_04722345.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           FA6140]
 gi|268594030|ref|ZP_06128197.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           35/02]
 gi|268547419|gb|EEZ42837.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           35/02]
          Length = 1071

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|238063481|ref|ZP_04608190.1| GCN5 N-acetyltransferase [Micromonospora sp. ATCC 39149]
 gi|237885292|gb|EEP74120.1| GCN5 N-acetyltransferase [Micromonospora sp. ATCC 39149]
          Length = 682

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIK 36
           LLR Y + V   V   S   A +A +
Sbjct: 648 LLRAYGIDVLPSVPARSADEAVAAAR 673


>gi|156064597|ref|XP_001598220.1| hypothetical protein SS1G_00306 [Sclerotinia sclerotiorum 1980]
 gi|154691168|gb|EDN90906.1| hypothetical protein SS1G_00306 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 786

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KYN+P A     ++   A   I ++   + V+K+   A G+             
Sbjct: 112 SKDFMKKYNIPTAAYENFTNYEDARKYIDSISHNV-VIKASGLAAGK------------- 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV + +S +     +++I    ++ ++ G  G  V    +E+  +      LS+L 
Sbjct: 158 -GVIIPTSKEEAHQALKDI----MLDREFGDAGDEV---VIEEFLEGDE---LSILT 203


>gi|84501581|ref|ZP_00999753.1| propionyl-CoA carboxylase, alpha subunit [Oceanicola batsensis
           HTCC2597]
 gi|84390202|gb|EAQ02761.1| propionyl-CoA carboxylase, alpha subunit [Oceanicola batsensis
           HTCC2597]
          Length = 681

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K + ++  V    G   +I     A      +  P+ +  S                  
Sbjct: 119 SKKIAQEAGVNTVPGYMGLIEDADEAVKISSEIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  +        +        +K         + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWTDDEAREGFQ-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQAR 184
                +      +    I+   +   ++     +D        E   +L   +     A 
Sbjct: 217 SHGNGIYL---GERECSIQRRNQKVVEEAPSPFLDEETRRAMGEQAVALAKAVG---YAS 270

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
               +   +      +K+   LE+N
Sbjct: 271 AGTVEFIVD-----GEKNFYFLEMN 290


>gi|323482996|ref|ZP_08088392.1| hypothetical protein HMPREF9474_00141 [Clostridium symbiosum
           WAL-14163]
 gi|323403702|gb|EGA96004.1| hypothetical protein HMPREF9474_00141 [Clostridium symbiosum
           WAL-14163]
          Length = 1123

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 64/220 (29%), Gaps = 40/220 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +   PV    V+++V AA +  + +  P+ V  +    G               G
Sbjct: 159 KDTMEEIGEPVIPSEVVTTVDAAMAFAEKIGFPVIVRPAFTLGG------------TGGG 206

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             +    L  + +      G  L           ++ + VE      +E+   ++  R S
Sbjct: 207 IAKTRRELDEIATA-----GIRLS---------PIHQILVEKCIAGWKEIEFEVM--RDS 250

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLELQG 181
                   +    D   V       I   +I P + +  ++         ++   + ++G
Sbjct: 251 VGNEITVCSMENFDP--VGIHTGDSI---VIAPAVTLADKEYQMLRSAALNIIQAMGIEG 305

Query: 182 QARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
                      +   A  + +  +   + L     G    
Sbjct: 306 GCNCQFALNPESFEYAVIEVNPRVSRSSALASKATGYPIA 345


>gi|284045552|ref|YP_003395892.1| F420-dependent oxidoreductase, G6PDH family [Conexibacter woesei
           DSM 14684]
 gi|283949773|gb|ADB52517.1| F420-dependent oxidoreductase, G6PDH family [Conexibacter woesei
           DSM 14684]
          Length = 331

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 22/190 (11%)

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL---LVD 125
           G+    ++  V +   E  G+     +   +   +  ++ E+  D   + Y ++   + +
Sbjct: 101 GIGTGEAMNEVPATGMEWPGARERRLRMAESIELIRKLWTEERVDFDGDYYRTVRATIYE 160

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
           R    +    +  G +    V +     I         G  ++   SL + +EL  Q   
Sbjct: 161 RPEQAIPIYVAAAGPLAARLVGRVADGFICT------SGKRTDLYTSLLENIELGAQTAG 214

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVL----DSKISFDDNALYRHLDIQE 241
                   + +     D  L     L          L    + K+S DD      L+++ 
Sbjct: 215 RDASTINKMIEIKVSYDTDL----DLAESACHWWGALALTPEEKMSTDD-----PLELER 265

Query: 242 LRDVSEEDSR 251
           L D   E +R
Sbjct: 266 LADAHPERAR 275


>gi|241692257|ref|XP_002400859.1| ATP-citrate synthase, putative [Ixodes scapularis]
 gi|215506759|gb|EEC16253.1| ATP-citrate synthase, putative [Ixodes scapularis]
          Length = 78

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 7/64 (10%)

Query: 283 MDIIKLYGGAP--ANFLDVGGGADQDKVAAAFKIIT-----SDSSVKGILINIFGGIMRC 335
            D +   GGA   AN+ +  G   + +     K I      S+   +G ++ I GGI   
Sbjct: 1   SDTVCDLGGATELANYGEYSGAPTEQQTYEYAKTILGLMTESEKRKEGKVLIIGGGIANF 60

Query: 336 DVLV 339
             + 
Sbjct: 61  TNVA 64


>gi|241664205|ref|YP_002982565.1| acetyl-CoA carboxylase biotin carboxylase subunit [Ralstonia
           pickettii 12D]
 gi|309783078|ref|ZP_07677797.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866232|gb|ACS63893.1| acetyl-CoA carboxylase, biotin carboxylase [Ralstonia pickettii
           12D]
 gi|308918186|gb|EFP63864.1| acetyl-CoA carboxylase, biotin carboxylase subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 455

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 113/333 (33%), Gaps = 45/333 (13%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +        +  K +  P+ +  +                 
Sbjct: 119 AKQAMIKSGVPCVPGSEGALPEDPKEILATAKKVGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      +          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALINAVNMTREEAGRAFGNPE----------VYMEKFLEHPRHVEIQVLA 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQA 183
           D+    V      +    ++   +   ++     I   LI    +  A  C  +  +G  
Sbjct: 217 DQHRNAVWL---GERDCSMQRRHQKVIEEAPAPHIPRRLIERIGDRCAEACKKIGYRGAG 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
             +        Y  F + +  +   +P+  M  G  +     +++  +   +R  DI  L
Sbjct: 274 TFEFLYENGEFY--FIEMNTRVQVEHPVTEMITGVDIVQEQIRVAAGEKLRFRQKDIT-L 330

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLYGGAPANFLDVG 300
           +  + E     E       +    G I    +  G G+ + +      +   P N+  + 
Sbjct: 331 KGHAIECRINAE---DPFKFTPSPGRITSWHVPGGPGVRVDSHAYNGYF--VPPNYDSMI 385

Query: 301 G-----GADQDKVAAAFKIITSDSSVKGILINI 328
           G     GA +++  A  +I  S+  V+GI  N+
Sbjct: 386 GKVITYGATREQAIARMRIALSEMVVEGIQTNV 418


>gi|5499725|gb|AAD43968.1|AF119250_1 carbamoyl-phosphate synthetase III [Alcolapia grahami]
          Length = 1505

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 66/224 (29%), Gaps = 46/224 (20%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L      + N  +A  + + SV  A  A + +  P+ V  +    G            
Sbjct: 546 RQLFADKLMEINEKIAPSIAVESVSDALRAAEQIGYPVMVRSAYALGGL----------- 594

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  + ++ + +    ++ L  +             N + VE      +E+   ++ 
Sbjct: 595 ----GSGLCANKEKLEETAQKALAMS-------------NQILVEKSLLGWKEVEYEVVR 637

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDML 177
           D     V          ++E            +++ P   +++E+          +   L
Sbjct: 638 DVADNCVTV-------CNMENFDPMGIHTGDSIVVAPSQTLSNEEYHMLRETAIKVVRHL 690

Query: 178 ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
            + G+  I       +L     + +  L   + L     G    
Sbjct: 691 GIIGECNIQYALHPSSLEYCIIEVNARLSRSSALASKATGYPLA 734


>gi|326390147|ref|ZP_08211708.1| hypothetical protein TheetDRAFT_0945 [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993795|gb|EGD52226.1| hypothetical protein TheetDRAFT_0945 [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 447

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 7/136 (5%)

Query: 252 EIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAA 311
            ++ K  +  Y  +   + C     GL M    ++       A    +G GA+   + A 
Sbjct: 55  NLKDKIGDFVYSEM---LACSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIKLITAG 111

Query: 312 FKIITSDSSVKGILINIF---GGIMRCD-VLVKGILSAVKEVKINIPLVMRLEGANVDIG 367
               T    +K I  NI    GG+   D          + E+K+N+P++      N +  
Sbjct: 112 KLRRTDLEKIKQIKPNIILLAGGVDYGDRETALYNGEKLAELKLNVPVIYAGNIENREEI 171

Query: 368 NRLIAESGLNVITAID 383
           + +  E+G  V    +
Sbjct: 172 SYIFQEAGQEVYIVDN 187


>gi|320010414|gb|ADW05264.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 376

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 12/104 (11%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK-----ELPADS 66
           L +   P  +  +++    A +  + + G   ++K+ +  G  GKG +      +     
Sbjct: 103 LTEIGAPCPRHRIVADPADATAFAEEVGGFPVILKT-VRGGYDGKGVWVVRSEADAAEPF 161

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
           + GV V    +  +  +RE+  + + +    P G  V    VE 
Sbjct: 162 RAGVPVL--AEEKVDFVRELAANIVRS----PHGQAVAYPVVES 199


>gi|294852261|ref|ZP_06792934.1| acetyl-CoA carboxylase [Brucella sp. NVSL 07-0026]
 gi|294820850|gb|EFG37849.1| acetyl-CoA carboxylase [Brucella sp. NVSL 07-0026]
          Length = 413

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 79  EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 133

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 134 SAEELPIALATARSEAGAA 152


>gi|285018123|ref|YP_003375834.1| carbamoyl-phosphate synthetase large chain protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473341|emb|CBA15846.1| probable carbamoyl-phosphate synthetase large chain protein
           [Xanthomonas albilineans]
          Length = 1080

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 47/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   K  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLECPKAAVARTLEEALEIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +             G   S  + V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIEIVGR-----------GLELSPTSEVLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|240122735|ref|ZP_04735691.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           PID332]
 gi|268681334|ref|ZP_06148196.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           PID332]
 gi|268621618|gb|EEZ54018.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           PID332]
          Length = 1071

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 36/211 (17%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARID 186
             +           IE            + + P   +T     +     +  L+      
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDT 279

Query: 187 GGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
           GG           + +M ++E+NP +   + 
Sbjct: 280 GGSNVQFAVNP-ENGEMIVIEMNPRVSRSSA 309


>gi|240114896|ref|ZP_04728958.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           PID18]
 gi|260441288|ref|ZP_05795104.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           DGI2]
 gi|268600552|ref|ZP_06134719.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           PID18]
 gi|291044644|ref|ZP_06570353.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           DGI2]
 gi|268584683|gb|EEZ49359.1| carbamoyl-phosphate synthase subunit large [Neisseria gonorrhoeae
           PID18]
 gi|291011538|gb|EFE03534.1| carbamoyl phosphate synthase large subunit [Neisseria gonorrhoeae
           DGI2]
          Length = 1071

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|225573666|ref|ZP_03782421.1| hypothetical protein RUMHYD_01862 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038959|gb|EEG49205.1| hypothetical protein RUMHYD_01862 [Blautia hydrogenotrophica DSM
           10507]
          Length = 447

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           +AK  +RK  VPV  G    +    +A  A + +  P+ +  S
Sbjct: 118 EAKNTMRKAGVPVVPGTKEPVYDPESALEAAREIGFPVMIKAS 160


>gi|150403045|ref|YP_001330339.1| phosphoribosylglycinamide formyltransferase 2 [Methanococcus
           maripaludis C7]
 gi|171472895|sp|A6VIB2|PURT_METM7 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|150034075|gb|ABR66188.1| phosphoribosylglycinamide formyltransferase 2 [Methanococcus
           maripaludis C7]
          Length = 388

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 47/143 (32%), Gaps = 29/143 (20%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
             K  +  AK     S+   + A++ +  P  V+K  + + G+G+   K      K    
Sbjct: 120 FEKLGLRTAKYEFAESLEELKEAVQRIGIPC-VIKPIMSSSGKGQSTIKSERDIEK---- 174

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              S     S  R I                   V VE+      E  ++LL  RTS   
Sbjct: 175 ---SWDYAKSAARGIG----------------TKVIVEEFIKFDYE--ITLLTARTSEGT 213

Query: 132 AF---IASTQGGMDIEEVAKDYP 151
            F   I   Q   D  E  + +P
Sbjct: 214 KFCEPIGHIQIDGDYHESWQPHP 236


>gi|114650524|ref|XP_001148773.1| PREDICTED: propionyl-Coenzyme A carboxylase, alpha polypeptide
           isoform 6 [Pan troglodytes]
          Length = 663

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 114 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 158

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 159 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 211

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 212 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 268

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 269 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 301


>gi|150016735|ref|YP_001308989.1| bifunctional glutamate--cysteine ligase/glutathione synthetase
           [Clostridium beijerinckii NCIMB 8052]
 gi|149903200|gb|ABR34033.1| glutamate--cysteine ligase, putative/amino acid ligase, putative
           [Clostridium beijerinckii NCIMB 8052]
          Length = 782

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 25/110 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +L    + V KG+ ++S++ + + IK       V+K +    G G   FKE       
Sbjct: 526 KRVLSDSGIKVPKGIEVNSINESFNIIKEFTKKPVVIKPKSTNFGIGISIFKEGAD---- 581

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
                   +  I    E+                 N V +E+     +E 
Sbjct: 582 --------EESIKKAFELAFKYD------------NTVLIEEFVK-GKEY 610


>gi|315187083|gb|EFU20840.1| biotin carboxylase ;acetyl-CoA carboxylase carboxyltransferase
           subunit alpha [Spirochaeta thermophila DSM 6578]
          Length = 442

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 30/214 (14%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK   RKY VPV  G    +  V  A + ++ +  P+ V                    
Sbjct: 118 QAKETARKYGVPVIPGSDGAVEDVAQARALVREMGFPVIV------------KAAAGGGG 165

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E  L+  +    +                    +Y+E      R + + LL 
Sbjct: 166 KGMRIVWKEEDLERTLRIASQEAEKAFSDG----------TLYIEKFLQNPRHVEVQLLG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D        +   +    +++  +   ++    ++ P +     E    L   +   G  
Sbjct: 216 DAHGN---VVHLGERDCSVQKNHQKLVEESPSPVVTPEMRKAMGEAAVRLFKGIGYVGAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++        Y  F + +  +   +P+  M  G
Sbjct: 273 TVEFLVADGRFY--FMEVNARIQVEHPVTEMITG 304


>gi|291400263|ref|XP_002716391.1| PREDICTED: methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
           [Oryctolagus cuniculus]
          Length = 733

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 67/221 (30%), Gaps = 43/221 (19%)

Query: 8   AKALLRKYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K+++    VPV +G      S          +  P+ ++K+    GG+G          
Sbjct: 166 SKSIMAAAGVPVVEGYHGEEQSDQCLREHAARIGYPV-MIKAVRGGGGKGM-------RI 217

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +     +  L+S   + ++                    V +E   D  R + + +  D
Sbjct: 218 VQSAEEFQEQLESARREAKKSFNDD--------------AVLIEKFVDTPRHVEVQVFGD 263

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLE 178
                V          + +   +   QKI +    P  G+         E        + 
Sbjct: 264 HHGNAVYL-------FERDCSVQRRHQKIIEEA--PAPGIKPEVRKKLGEAAVRAAKAVN 314

Query: 179 LQGQARIDGG-DLFPNLYKAFCDKDMSLLEINPLIIMKNGR 218
             G   ++   D   N Y  F + +  L   +P+  M  G 
Sbjct: 315 YVGAGTVEFIMDSKQNFY--FMEMNTRLQVEHPVTEMVTGT 353


>gi|258404752|ref|YP_003197494.1| phosphoribosylglycinamide synthetase [Desulfohalobium retbaense DSM
           5692]
 gi|257796979|gb|ACV67916.1| phosphoribosylglycinamide synthetase [Desulfohalobium retbaense DSM
           5692]
          Length = 410

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 15/76 (19%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L ++  V   +         A    + +  P+ VVK    AG R              GV
Sbjct: 114 LFKENGVSSPQFSFACGFDEACREAQKIGWPV-VVKPADSAGSR--------------GV 158

Query: 71  RVESSLKSVISDIREI 86
           +   S + + S + EI
Sbjct: 159 QKVDSPEDMKSALDEI 174


>gi|226364277|ref|YP_002782059.1| phosphoribosylamine--glycine ligase [Rhodococcus opacus B4]
 gi|226242766|dbj|BAH53114.1| phosphoribosylamine--glycine ligase [Rhodococcus opacus B4]
          Length = 417

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 51/165 (30%), Gaps = 41/165 (24%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    V  A   ++ S    + A+     P +VVK    A G+             
Sbjct: 106 AKDVMATAGVKTAHSEIVDSPAKLDEALDRFG-PNWVVKDDGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V +   +      E+L            G  V    +E   D   E+ L  +VD  
Sbjct: 152 -GVVVTTDRDAARDHAAELL----------ENGHPV---LLESFLD-GPEVSLFCVVDGE 196

Query: 128 SGMVAFIASTQ------------GGMDIEEVAKDYPQKIFKLLID 160
           + +    A               GGM         P++    ++D
Sbjct: 197 TVVPLLPAQDHKRVGDGDTGPNTGGMGAYTPLPWLPEQTVTQIVD 241


>gi|192289987|ref|YP_001990592.1| urea carboxylase [Rhodopseudomonas palustris TIE-1]
 gi|192283736|gb|ACF00117.1| urea carboxylase [Rhodopseudomonas palustris TIE-1]
          Length = 1182

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 37/226 (16%)

Query: 6   YQAKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++A+ L +  NVP+  G  +I S+  A  A   +  P  ++KS    GG G     +   
Sbjct: 117 HRARELAQASNVPLLPGTGLIDSIEEALEAAGRIRFP-LMLKSTAGGGGIGMQLCHDEAT 175

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +    V+ + ++   D                       VY+E      R + + +  
Sbjct: 176 LRERFATVQRTARASFGDA---------------------RVYLERFVADARHIEVQIFG 214

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL-CDMLELQGQA 183
           D        IA  +    ++   +   ++       P  G++ E  A L    + L    
Sbjct: 215 DGQGN---VIALGERDCSLQRRNQKVVEET------PAPGISDEMRARLHQAAVALGQSV 265

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
             +       +Y    D +   LE+N  + +++    V ++    D
Sbjct: 266 AYESAGTVEFIYDVARD-EFYFLEVNTRLQVEHP---VTEAVFGVD 307


>gi|170078726|ref|YP_001735364.1| acetyl-CoA carboxylase biotin carboxylase subunit [Synechococcus
           sp. PCC 7002]
 gi|169886395|gb|ACB00109.1| acetyl-CoA carboxylase, biotin carboxylase [Synechococcus sp. PCC
           7002]
          Length = 448

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++   VP   G   +++S   A    + +  P+ ++K+    GGR           
Sbjct: 120 AKKTMQAAKVPTVPGSAGLVASEEQALEIAQQIGYPV-MIKATAGGGGR----------- 167

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S + +    R   G        G        VY+E   +  R +   +L D
Sbjct: 168 ---GMRLVPSAEELPRLYRAAQGEAEAAFGNGG-------VYIEKFIERPRHIEFQILAD 217

Query: 126 RTSGMV 131
           +   ++
Sbjct: 218 QYGNVI 223


>gi|168204662|ref|ZP_02630667.1| phosphoribosylamine--glycine ligase [Clostridium perfringens E str.
           JGS1987]
 gi|170663773|gb|EDT16456.1| phosphoribosylamine--glycine ligase [Clostridium perfringens E str.
           JGS1987]
          Length = 416

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A   V      A+  ++    P  V+K+   A G+             
Sbjct: 106 SKDFMKKYGVKTADYEVFYDYEEAKIYLENCKYPR-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +    I    E L   +I       G     + VE+    +    LS+ 
Sbjct: 152 -GVVICENKNQAI----ETLNLFMIDDVFNGAGK---KIVVEEFLQGVEASILSVT 199


>gi|153009604|ref|YP_001370819.1| acetyl-CoA carboxylase biotin carboxylase subunit [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561492|gb|ABS14990.1| acetyl-CoA carboxylase, biotin carboxylase [Ochrobactrum anthropi
           ATCC 49188]
          Length = 459

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG
Sbjct: 125 EAKRTAKRLGIPVVPGSDGGVTDDVEAAR-IAKEIGYPV-IIKASAGGGGRG 174


>gi|145300328|ref|YP_001143169.1| phosphoribosylamine--glycine ligase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853100|gb|ABO91421.1| phosphoribosylamine-glycine ligase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 429

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARHAIPTADYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L         G  G+RV    +E+  D   E    ++VD   
Sbjct: 154 GVIVAMTLQEAEDAVRDML----SGNAFGDAGARV---VIEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|154252760|ref|YP_001413584.1| carbamoyl-phosphate synthase large subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154156710|gb|ABS63927.1| carbamoyl-phosphate synthase, large subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 1079

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           ALL K  +      +  S   A+   + +  P+ +  S +  GGRG
Sbjct: 689 ALLEKLGLKQPPNGIARSAAEAKMIAERIGYPVVIRPSYVL-GGRG 733


>gi|115375436|ref|ZP_01462697.1| carbamoyl-phosphate synthase, large subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|310821115|ref|YP_003953473.1| carbamoyl-phosphate synthase large chain [Stigmatella aurantiaca
           DW4/3-1]
 gi|115367563|gb|EAU66537.1| carbamoyl-phosphate synthase, large subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394187|gb|ADO71646.1| Carbamoyl-phosphate synthase large chain [Stigmatella aurantiaca
           DW4/3-1]
          Length = 1081

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 50/165 (30%), Gaps = 33/165 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA ++K  V + K     ++  A S ++ +  P  +         R              
Sbjct: 133 KAAMQKIGVALPKSGYARTIDEALSLVEEIGFPAII---------RPSFTLGGTGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +   +  R           +G   S  + + VE+     +E  L ++  R S
Sbjct: 181 ---IAYNREEYETICR-----------SGLKASPTSTILVEESVLGWKEYELEVV--RDS 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
                I  +     IE +          + + P   +T  +   +
Sbjct: 225 ADNVIIVCS-----IENLDPMGVHTGDSITVAPSQTLTDREYQRM 264


>gi|124267252|ref|YP_001021256.1| hypothetical protein Mpe_A2065 [Methylibium petroleiphilum PM1]
 gi|124260027|gb|ABM95021.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 897

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 25/146 (17%)

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYG----------------GAP-----ANFLDVGGGAD 304
           DG +  + NG G  +   D   L G                G P     AN +D+ G A 
Sbjct: 294 DGTLTIVTNGGGAGVMAADAASLAGIPLRELGPELLSRLDAGLPATWSHANPIDIIGDAP 353

Query: 305 QDKVAAAFKIITSDSSVKGI-LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
             +     + + +D     +  ++    I+R D + +     V+     + +   L  A 
Sbjct: 354 VHRYTDTLRALLADRDTGAVLFLHAPTAIVRSDDIARACAPIVRPDADRV-MACWLGDAA 412

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQ 389
           V    R+  E+G  V      ++A  
Sbjct: 413 VTDARRIFEEAG--VADYATPEEAVH 436


>gi|311104877|ref|YP_003977730.1| cyanophycin synthetase 1 [Achromobacter xylosoxidans A8]
 gi|310759566|gb|ADP15015.1| cyanophycin synthetase 1 [Achromobacter xylosoxidans A8]
          Length = 857

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +++   A +A + L GP+ VVK +  + GRG     E       
Sbjct: 209 KMLLDSAGVPVPMGRSVTTAEEAWAAAEELGGPV-VVKPRDGSQGRGVAVNIETRE---- 263

Query: 69  GVRVESSLKSVISDIREIL 87
             RV  + +       E++
Sbjct: 264 --RVIQAFEVAEEISSEVI 280


>gi|262306423|gb|ACY45804.1| pyrimidine biosynthesis [Achelia echinata]
          Length = 200

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 4/48 (8%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + L      +    VA      SV  A +A K L  P+ V  +    G
Sbjct: 101 RKLFADKVAEIGEKVAPSAAAYSVDEALNAAKNLGYPVLVRAAYALGG 148


>gi|255068592|ref|ZP_05320447.1| carbamoyl-phosphate synthase, large subunit [Neisseria sicca ATCC
           29256]
 gi|255047150|gb|EET42614.1| carbamoyl-phosphate synthase, large subunit [Neisseria sicca ATCC
           29256]
          Length = 1071

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|239831783|ref|ZP_04680112.1| acetyl-CoA carboxylase, biotin carboxylase [Ochrobactrum
           intermedium LMG 3301]
 gi|239824050|gb|EEQ95618.1| acetyl-CoA carboxylase, biotin carboxylase [Ochrobactrum
           intermedium LMG 3301]
          Length = 459

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG
Sbjct: 125 EAKRTAKRLGIPVVPGSDGGVTDDVEAAR-IAKEIGYPV-IIKASAGGGGRG 174


>gi|239627120|ref|ZP_04670151.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517266|gb|EEQ57132.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 693

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 82/241 (34%), Gaps = 36/241 (14%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           ++ E+++   L  + VPV    V ++  AA      L  PL V   +IH+          
Sbjct: 477 SLSEFESLNYLSSHGVPVPPQAVAATADAAVEEAGKLGYPLSV---KIHS-------RDI 526

Query: 62  LPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                 GGV++                + +         +R+  V ++       E+ + 
Sbjct: 527 QHKSDVGGVKLNI-RDEAELRAA--FAAVMDNCAKNAPDARLEGVLLKPMLKYGTEMIIG 583

Query: 122 LLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML---- 177
           +  DR  G    +    G          + +    + + P   +T +    + + L    
Sbjct: 584 VNNDRDFG-PMIMVGMGG---------VFVELFKDVALAPAP-LTEKQARDMIESLASYP 632

Query: 178 ---ELQGQARIDGGDLFPNLYK----AFCDKD-MSLLEINPLIIMKNGRLRVLDSKISFD 229
                +G A  D   L   L K    A   KD +  L+INP+ I ++G        + +D
Sbjct: 633 LLNGYRGGAVCDKEALVNLLVKISEMAAEGKDKVKELDINPVFITEDGAAIADALLVMYD 692

Query: 230 D 230
           D
Sbjct: 693 D 693


>gi|224025586|ref|ZP_03643952.1| hypothetical protein BACCOPRO_02326 [Bacteroides coprophilus DSM
           18228]
 gi|224018822|gb|EEF76820.1| hypothetical protein BACCOPRO_02326 [Bacteroides coprophilus DSM
           18228]
          Length = 424

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  ++++++P A  K +   ++    + ++TL  P YV+K+     G+           
Sbjct: 110 AKGFMQRHHIPTAGYKSITADNLEEGLAYLETLQAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    +++E+LG           G+    V +E+      E  + +L D
Sbjct: 158 ---GVLILPTLEEAKKELKEMLGGMF--------GNASATVVIEEFLS-GIECSVFVLTD 205

Query: 126 RTSGMVA 132
             S  + 
Sbjct: 206 GKSYKIL 212


>gi|218532086|ref|YP_002422902.1| phosphoribosylamine/glycine ligase [Methylobacterium
           chloromethanicum CM4]
 gi|218524389|gb|ACK84974.1| phosphoribosylamine/glycine ligase [Methylobacterium
           chloromethanicum CM4]
          Length = 435

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 15/82 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++++P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 112 KDLCAEHDIPTAAFARFTDLEPALAYLRERGAPI-VVKADGLAAGK-------------- 156

Query: 69  GVRVESSLKSVISDIREILGST 90
           GV V  +L    + +R IL  T
Sbjct: 157 GVTVAETLPEAEAAVRAILDGT 178


>gi|154486582|ref|ZP_02027989.1| hypothetical protein BIFADO_00399 [Bifidobacterium adolescentis
           L2-32]
 gi|154084445|gb|EDN83490.1| hypothetical protein BIFADO_00399 [Bifidobacterium adolescentis
           L2-32]
          Length = 378

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 28/216 (12%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAE-SAIKTLPGPLYVVKSQI-HAGGRGKGRFKELPADS 66
           K LL    +PVA G+   ++ A               + +Q+  AG +     K   A S
Sbjct: 149 KVLLAAAGIPVAPGI---TLDARSFDKASEFKANADAIMAQVSEAGLQYPLFVKPSRAGS 205

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             GV               +                   + VE G D  RE+  ++L  +
Sbjct: 206 SFGVTKVEHEGDAAELAAAV----------YEASHHDWRILVEQGID-AREIECAVLCPK 254

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
                   AS  G + +++ A+           D      S+ + +    +E+      +
Sbjct: 255 AGEAPQ--ASWPGEIVLDKRAEGD---------DQFYDFDSKYMDAAASHVEVPANLPEE 303

Query: 187 GGDLFPNLY-KAFCDKDMSLLEINPLIIMKNGRLRV 221
             +L      KAF   D + L      + K+G++ V
Sbjct: 304 TLNLVRETAKKAFVAVDGAGLSRVDTFVTKDGKVMV 339


>gi|148643531|ref|YP_001274044.1| acyl-CoA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552548|gb|ABQ87676.1| acyl-CoA synthetase [Methanobrevibacter smithii ATCC 35061]
          Length = 698

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 84/229 (36%), Gaps = 27/229 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A A+   Y +  A   + ++   A      +  P+ V+K             K L    
Sbjct: 490 EAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPV-VLKI---------ASDKILHKSD 539

Query: 67  KGGVRV-ESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GGV+V   S +   +   EI+ +         P G  V  +      +  +E+ + ++ 
Sbjct: 540 IGGVKVGIESEEEAKATFDEIIANAKKAHPDIVPDGVEVQKMM-----ETGQEVIVGMIK 594

Query: 125 DRTSGMVAFIASTQGGMD---IEEVAKDYPQKIFKLLIDPLIGVT--SEDVASLCDMLEL 179
           D+  G    IA   GG+    IE+V+      I    ID  I  T  SE +         
Sbjct: 595 DKQFG--PMIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVSELLKGYRGEAPC 652

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
              A  +       L   F +  +S L+INP+ + +NG    LD KI  
Sbjct: 653 DIDAVKEAIKRVARLTLDFPE--ISELDINPIFVYENGS-SALDIKIKL 698


>gi|78049719|ref|YP_365894.1| putative acetyltransferase (GNAT) family protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038149|emb|CAJ25894.1| putative acetyltransferase (GNAT) family protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 902

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 78/227 (34%), Gaps = 25/227 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL  Y +PV    V +S + A      L      V  ++ +            +D  G 
Sbjct: 497 RLLAAYGIPVVPLQVAASANEAALLADPLLAVGRTVTLKVLSSE------IAHKSDVDGV 550

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA--DILRELYLSLLVDRT 127
               SS+ +V      IL               +  V V+        REL   +  D  
Sbjct: 551 RLNLSSVAAVREAATGILARARAAHPHA----VIEGVIVQPTVLRPKARELIAGIADDPV 606

Query: 128 SGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-----PLIGVTSEDVASLCDMLELQGQ 182
            G        +GG  +E +     +++    +D      LIG T      L    ++   
Sbjct: 607 FGPAIVFG--RGGTAVEVIND---RELALPPLDLRLAHELIGRT-RVSRILKAYRDVPAA 660

Query: 183 ARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                  +   L +   D  +++ L+INPL+  ++G +  LD++++ 
Sbjct: 661 DERAVALVLVKLAQLAADIPEITELDINPLLADRDG-VIALDARVAV 706


>gi|328956345|ref|YP_004373678.1| carbamoyl-phosphate synthase large subunit [Coriobacterium
           glomerans PW2]
 gi|328456669|gb|AEB07863.1| carbamoyl-phosphate synthase large subunit [Coriobacterium
           glomerans PW2]
          Length = 1107

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 58/208 (27%), Gaps = 36/208 (17%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + +  +P+A+     SV  A      +  P  +  S    G                G  
Sbjct: 136 MAEIGLPLARSGYAYSVDDAIEIAARVGYPCVLRPSYTLGG---------------AGGG 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +    + +   + +  G  L              V VE+  +  +E  + ++ D     +
Sbjct: 181 IAHDEEELREIVSQ--GLELSCAGE---------VLVEESIEGWKEYEMEVMRDAAGNGI 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDMLELQGQARIDGGD 189
                      IE +          + + P   ++           +  L+      GG 
Sbjct: 230 IV-------CSIENLDPMGVHTGDSITVAPAQTLSDIEYQRMRAASLAVLEKVGVETGGS 282

Query: 190 LFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                     D  + ++E+NP +   + 
Sbjct: 283 NVQFAVNP-RDGRLIIIEMNPRVSRSSA 309


>gi|240140678|ref|YP_002965158.1| phosphoribosylglycinamide synthetase (GAR synthetase)
           [Methylobacterium extorquens AM1]
 gi|240010655|gb|ACS41881.1| phosphoribosylglycinamide synthetase (GAR synthetase)
           [Methylobacterium extorquens AM1]
          Length = 435

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 15/82 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  ++++P A     + +  A + ++    P+ VVK+   A G+              
Sbjct: 112 KDLCAEHDIPTAAFARFTDLEPALAYLRERGAPI-VVKADGLAAGK-------------- 156

Query: 69  GVRVESSLKSVISDIREILGST 90
           GV V  +L    + +R IL  T
Sbjct: 157 GVTVAETLPEAEAAVRAILDGT 178


>gi|256827562|ref|YP_003151521.1| phosphoribosylamine--glycine ligase [Cryptobacterium curtum DSM
           15641]
 gi|256583705|gb|ACU94839.1| phosphoribosylamine--glycine ligase [Cryptobacterium curtum DSM
           15641]
          Length = 430

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 23/125 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  +   N+P A      + + A + ++ +  P+ VVK+   A G+             
Sbjct: 107 SKRFMEDNNIPTAAYRSFDNKNEALAYVREMGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V   +K+    + E           G  G RV    +E+         L+ +    
Sbjct: 153 -GVIVADDIKTAEDAVEECFA-----GAFGEAGQRV---VIEECLSGPECSLLAFVCGGQ 203

Query: 128 SGMVA 132
           +  + 
Sbjct: 204 AHCMV 208


>gi|222444971|ref|ZP_03607486.1| hypothetical protein METSMIALI_00587 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350455|ref|ZP_05975872.1| acetate--CoA ligase [Methanobrevibacter smithii DSM 2374]
 gi|222434536|gb|EEE41701.1| hypothetical protein METSMIALI_00587 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861238|gb|EFC93536.1| acetate--CoA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 698

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 84/229 (36%), Gaps = 27/229 (11%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +A A+   Y +  A   + ++   A      +  P+ V+K             K L    
Sbjct: 490 EAYAVAEAYGIEAAPIKLATNADEASQLAADMEFPV-VLKI---------ASDKILHKSD 539

Query: 67  KGGVRV-ESSLKSVISDIREILGSTLITK-QTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GGV+V   S +   +   EI+ +         P G  V  +      +  +E+ + ++ 
Sbjct: 540 IGGVKVGIESEEEAKATFDEIIANAKKAHPDIVPDGVEVQKMM-----ETGQEVIVGMIK 594

Query: 125 DRTSGMVAFIASTQGGMD---IEEVAKDYPQKIFKLLIDPLIGVT--SEDVASLCDMLEL 179
           D+  G    IA   GG+    IE+V+      I    ID  I  T  SE +         
Sbjct: 595 DKQFG--PMIAFGMGGIYVNLIEDVSFKLANGISSQEIDEQINDTKVSELLKGYRGEAPC 652

Query: 180 QGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
              A  +       L   F +  +S L+INP+ + +NG    LD KI  
Sbjct: 653 DIDAVKEAIKRVARLTLDFPE--ISELDINPIFVYENGS-SALDIKIKL 698


>gi|149050764|gb|EDM02937.1| carbamyl phosphatate synthetase 2 (mapped), isoform CRA_c [Rattus
           norvegicus]
          Length = 1093

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 254 MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 294


>gi|78048384|ref|YP_364559.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|78036814|emb|CAJ24507.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
          Length = 381

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRVGLDAALARIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|15237260|ref|NP_197716.1| succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial,
           putative / succinyl-CoA synthetase, alpha chain,
           putative / SCS-alpha, putative [Arabidopsis thaliana]
 gi|56754629|sp|Q8LAD2|SUCA2_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           subunit alpha-2; Short=SCS-alpha-2; Flags: Precursor
 gi|10177814|dbj|BAB11180.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana]
 gi|20260190|gb|AAM12993.1| succinyl-CoA synthetase, alpha subunit [Arabidopsis thaliana]
 gi|21387045|gb|AAM47926.1| succinyl-CoA synthetase alpha subunit [Arabidopsis thaliana]
 gi|332005758|gb|AED93141.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2 [Arabidopsis
           thaliana]
          Length = 341

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 45/141 (31%), Gaps = 14/141 (9%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA-DQDKVAAAFKIITSDSS 320
           YI   G IG +     L    +      G   +  + +GG   +        +    D  
Sbjct: 186 YIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQ 245

Query: 321 VKGI-LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE----SG 375
            +GI LI   GG    D         +KE   + P+V  + G     G R+       SG
Sbjct: 246 TEGIVLIGEIGGTAEEDAAAL-----IKENGTDKPVVAFIAGLTAPPGRRMGHAGAIVSG 300

Query: 376 LNVITAI---DLDDAAQKIVH 393
                      L DA  K+V 
Sbjct: 301 GKGTAQDKIKSLRDAGVKVVE 321


>gi|15615188|ref|NP_243491.1| pyruvate carboxylase [Bacillus halodurans C-125]
 gi|10175246|dbj|BAB06344.1| pyruvate carboxylase [Bacillus halodurans C-125]
          Length = 1150

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 34/211 (16%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QA+    K N+PV  G    +SS+   ++       P +++K+ +  GGRG    +    
Sbjct: 124 QAREQAIKANLPVIPGSDGPVSSLEDVKAFADKHGYP-FIIKAALGGGGRGMRIVRSEND 182

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  V+ S +   S+ +   G+                VYVE   +  + + + +L 
Sbjct: 183 -------VQESYERAKSEAKAAFGND--------------EVYVEKFIENPKHIEVQILA 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D+    +      +    ++   +   +    + +     V      +   + E      
Sbjct: 222 DKHGNTLHLY---ERDCSVQRRHQKVVEVAPSVSL--SEDVRERICQAAVQLAENVNYVN 276

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEINPLIIMK 215
               +   +      + +   +E+NP I ++
Sbjct: 277 AGTVEFLVD-----REGNFYFIEVNPRIQVE 302


>gi|302393047|ref|YP_003828867.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Acetohalobium arabaticum DSM 5501]
 gi|302205124|gb|ADL13802.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Acetohalobium arabaticum DSM 5501]
          Length = 386

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 29/128 (22%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           Y+ K L +++N+PV+  + + +    + A      P+ ++KS    G  GKG F      
Sbjct: 108 YRQKELFKEHNLPVSDHMKVITEEDIKRAGDKFGYPV-MLKS-CTGGYDGKGNF------ 159

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 +  S   +    + +             G   N +  E+     RE  +S+L  
Sbjct: 160 ------LIRSKSEIKEGYQAL-------------GVGDNLLMAEEFIPFDRE--ISVLGC 198

Query: 126 RTSGMVAF 133
           R       
Sbjct: 199 RGVDGEVV 206


>gi|300856376|ref|YP_003781360.1| D-alanine-D-alanine ligase A [Clostridium ljungdahlii DSM 13528]
 gi|300436491|gb|ADK16258.1| D-alanine-D-alanine ligase A [Clostridium ljungdahlii DSM 13528]
          Length = 296

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 56/152 (36%), Gaps = 15/152 (9%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAE-SAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
            +K +L+  ++  AK + + S+   +   +  +  P+ VVK     G        +   D
Sbjct: 97  MSKKVLKSADINTAKWICVKSIEEIDYDKLDEIGYPV-VVKPNC-GGSSVATNIVKKKED 154

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +  V++     + +   + I G  +        G  +  + ++  A+     Y +   D
Sbjct: 155 IENNVKLALDYDTEVVIEKYIQGDEIT--CCMLKGKTLPVIAIKPNAEFFD--YTAKYAD 210

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKL 157
             S  +         +++E+  ++  +KI   
Sbjct: 211 GGSDEIV--------VELEKSLQEKVEKICVQ 234


>gi|294084706|ref|YP_003551464.1| phosphoribosylamine--glycine ligase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664279|gb|ADE39380.1| phosphoribosylamine--glycine ligase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 418

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 26/132 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           A+    ++N+P           +A   I  + G   VVK+   A G+             
Sbjct: 106 ARDFCTRHNIPQPAFFAAQDKDSAYRHIDAMNG-FCVVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +     + +  +LG           G     + +E+          +LL    
Sbjct: 152 -GVVVADTADEAKAAVDAMLGGQF--------GDASKTILIEERITGPEASLFALLDGGD 202

Query: 128 SGMVAFIASTQG 139
           +    ++AS Q 
Sbjct: 203 A---LYMASAQD 211


>gi|126651735|ref|ZP_01723937.1| hypothetical protein BB14905_15025 [Bacillus sp. B14905]
 gi|126591413|gb|EAZ85520.1| hypothetical protein BB14905_15025 [Bacillus sp. B14905]
          Length = 584

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 17/137 (12%)

Query: 266 DGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGADQDKVAAAFKIITSDSS 320
           +G+IG +            II  +G    N L     D+        +  + K +  D  
Sbjct: 190 EGDIGIVGASGTGIQEVTTIIDRFGKGVTNALGTGGRDLSTEVGAITMLDSIKALNQDPK 249

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVIT 380
           VK I +         + + + +L+ ++   I+ P+V    G               N+  
Sbjct: 250 VKVITVI---SKPPAEEVQRKVLNLLR--NIDKPVVTLFLGDKPSYQEE-------NIYH 297

Query: 381 AIDLDDAAQKIVHAVKG 397
           A  L++AA   V    G
Sbjct: 298 AYTLEEAAVVAVQLSNG 314


>gi|296366|emb|CAA32763.1| propionyl-CoA carboxylase [Homo sapiens]
 gi|12652777|gb|AAH00140.1| PCCA protein [Homo sapiens]
 gi|21425221|gb|AAK61392.1| propionyl-CoA carboxylase alpha polypeptide precursor [Homo
           sapiens]
          Length = 703

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 154 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 198

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 199 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 251

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 252 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 308

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 309 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 341


>gi|103487018|ref|YP_616579.1| carbamoyl-phosphate synthase L chain, ATP-binding [Sphingopyxis
           alaskensis RB2256]
 gi|98977095|gb|ABF53246.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Sphingopyxis
           alaskensis RB2256]
          Length = 612

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESA--IKTLPGPLYV 44
           AK L+ +  VPV  G +  +   A  A     +  P+ +
Sbjct: 119 AKKLMAEAGVPVTPGYMGENQDPAFLAERAAEIGYPVLI 157


>gi|242279484|ref|YP_002991613.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           salexigens DSM 2638]
 gi|259547217|sp|C6BV99|PURT_DESAD RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|242122378|gb|ACS80074.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           salexigens DSM 2638]
          Length = 393

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 25/140 (17%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +  +  +      +      AIK +  P  V+K  + + G+G+             V+ 
Sbjct: 123 EEVGLKTSPYKFADTKEEYLEAIKEIGIPC-VIKPVMSSSGKGQST-----------VKS 170

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E+ +       +        +      G     + VE   D   E+ L  +         
Sbjct: 171 EADVDRAWDYSQ--------SGGRTGEG----RIIVESFVDFDYEITLLTVRHAGGTSYC 218

Query: 133 F-IASTQGGMDIEEVAKDYP 151
             I   Q   D  E  +  P
Sbjct: 219 APIGHRQDDGDYRESWQPQP 238


>gi|209544198|ref|YP_002276427.1| acetyl-CoA carboxylase biotin carboxylase subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531875|gb|ACI51812.1| acetyl-CoA carboxylase, biotin carboxylase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 447

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R   VP V    G +  S+  A +    +  P+ + K+    GGR          
Sbjct: 119 AKTTMRALGVPLVPGSDGALA-SLDEARAVAAQVGYPVLI-KATAGGGGR---------- 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G++V  +   +         S   T+     G+  + VY+E   D  R + L +L 
Sbjct: 167 ----GMKVARTPDEIEEAW-----SVARTEARAAFGN--DEVYLEKYMDRPRHIELQILA 215

Query: 125 DRT 127
           D  
Sbjct: 216 DTH 218


>gi|229918568|ref|YP_002887214.1| carbamoyl-phosphate synthase, large subunit [Exiguobacterium sp.
           AT1b]
 gi|259585680|sp|C4L5W3|CARB_EXISA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|229469997|gb|ACQ71769.1| carbamoyl-phosphate synthase, large subunit [Exiguobacterium sp.
           AT1b]
          Length = 1067

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 20  AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
             G   ++V  A +    L  P+ V  S +  G
Sbjct: 682 PPGKTATNVEEAVACANELGYPVLVRPSYVLGG 714


>gi|169403166|emb|CAQ15955.1| putative biotin carboxylase [uncultured bacterium]
          Length = 151

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 8  AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
          AK ++ K  VP+  G    ++ V  A+     +  P+ ++K+
Sbjct: 36 AKRMMHKVGVPIFPGTQRAVNDVDEAKKVAAEMGYPV-ILKA 76


>gi|194442658|ref|YP_002039773.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194401321|gb|ACF61543.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 554

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 87/268 (32%), Gaps = 51/268 (19%)

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINP 210
            I    +D   G+T   V  L + L    Q    G     +L +   +      L E N 
Sbjct: 67  AIRTEAVD--DGITQVIVRQLEEAL----QQLAQGSSGSQSLIQVRRWESACQKLPEANL 120

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD---VSEEDSREIEAKQHN-------- 259
            ++   G      +     + AL R L++    D   + +E   +  A+           
Sbjct: 121 ALVSVAGEYAAELA-----EQALDRSLNVMIFSDNVTLDDEIRLKRRARDKGLLVMGPDC 175

Query: 260 -----------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGA 303
                       + +  +GNIG +             I L G    + +     D+    
Sbjct: 176 GTAMIANTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEV 235

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                  A +I+++D + +   +  F      D + + I++A+K      P+V    G +
Sbjct: 236 GGISALTALEILSADENSQ---VLAFVSKPPADAVRQHIIAAMKATG--KPVVALFLGFS 290

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKI 391
             +          NV  A  LD+AA+  
Sbjct: 291 SPVARE------GNVWFASTLDEAARLA 312


>gi|167756392|ref|ZP_02428519.1| hypothetical protein CLORAM_01925 [Clostridium ramosum DSM 1402]
 gi|237733054|ref|ZP_04563535.1| phosphoribosylformylglycinamidine synthase [Mollicutes bacterium
           D7]
 gi|167703800|gb|EDS18379.1| hypothetical protein CLORAM_01925 [Clostridium ramosum DSM 1402]
 gi|229383856|gb|EEO33947.1| phosphoribosylformylglycinamidine synthase [Coprobacillus sp. D7]
          Length = 416

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 32/207 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++++P AK   ++S   A  AI     P  V+K+   A G+             
Sbjct: 106 SKDFMIRHSIPTAKYKEVNSYDEAVKAISEFDYP-LVIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + +     ++E+    +I       G   + V +E+          SLL    
Sbjct: 152 -GVVIVDNHEDATVTLKEM----MIDGSLDGAG---SKVVLEEFL---TGFECSLLCFTD 200

Query: 128 SGMVAFIASTQGGMDIEEVAK-DYPQKIFKLLIDPL--IGVTSEDVASLCDML--ELQGQ 182
              +  + S +    I +  K      +  +  +P    G+       + D     L+  
Sbjct: 201 GETIVPMVSAKDHKQIFDGNKGPNTGGMGTVSPNPFMPEGMDEVIKRDILDPFMQGLKDD 260

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEIN 209
                G +F  L     D    +LE N
Sbjct: 261 NMDYRGVVFIGL--MIEDGKAKVLEFN 285


>gi|115350560|ref|YP_772399.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           ambifaria AMMD]
 gi|170699983|ref|ZP_02891010.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia ambifaria
           IOP40-10]
 gi|172059591|ref|YP_001807243.1| acetyl-CoA carboxylase biotin carboxylase subunit [Burkholderia
           ambifaria MC40-6]
 gi|115280548|gb|ABI86065.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia ambifaria
           AMMD]
 gi|170135131|gb|EDT03432.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia ambifaria
           IOP40-10]
 gi|171992108|gb|ACB63027.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia ambifaria
           MC40-6]
          Length = 455

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 111/339 (32%), Gaps = 57/339 (16%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +           +T+  P+ +  +                 
Sbjct: 119 AKQTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +        G     + + + + I +    P  G+    +  + D       A 
Sbjct: 217 DAHKNAIWL------GERDCSMQRRHQKVIEEA---PAPGIPRRLIERIGDR---CADAC 264

Query: 185 IDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
              G L    ++  + + +   +E+N       P+  M  G  +     +I+  +    R
Sbjct: 265 KKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVSEMITGVDIVQEQIRIAAGEKIALR 324

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-APA 294
             DIQ  R  + E     E       +    G I    +  G     +D     G   P 
Sbjct: 325 QRDIQ-FRGHAIECRINAE---DPFKFTPSPGRI-TSWHTPGGPGVRVDSHAYNGYFVPP 379

Query: 295 NFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
           N+  + G     GA +D+     +I  S+  V+GI  NI
Sbjct: 380 NYDSMIGKLITYGATRDQAIRRMRIALSEMVVEGIHTNI 418


>gi|57168407|ref|ZP_00367541.1| carbamoyl-phosphate synthase, large subunit [Campylobacter coli
           RM2228]
 gi|57020215|gb|EAL56889.1| carbamoyl-phosphate synthase, large subunit [Campylobacter coli
           RM2228]
          Length = 1089

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 49/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + ++K +   +   A  A+  +  PL +  S    G                
Sbjct: 131 KECMKKIGMDLSKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------T 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ D+  
Sbjct: 176 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDKND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + + P + +T     V       
Sbjct: 225 NCIIV-------CSIENLDPMGVHTGDSITVAPALTLTDKEYQVMRNASFA 268


>gi|325924700|ref|ZP_08186138.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Xanthomonas
           perforans 91-118]
 gi|325544906|gb|EGD16251.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Xanthomonas
           perforans 91-118]
          Length = 381

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           K L R+  +PV +   I      ++A+  +  P  V+K++   G  GKG+F+
Sbjct: 103 KTLFRELGIPVPEFAAIDDRVGLDAALARIGTPC-VLKTR-RFGYDGKGQFR 152


>gi|319941789|ref|ZP_08016111.1| D-alanine-D-alanine ligase [Sutterella wadsworthensis 3_1_45B]
 gi|319804722|gb|EFW01589.1| D-alanine-D-alanine ligase [Sutterella wadsworthensis 3_1_45B]
          Length = 319

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 42/139 (30%), Gaps = 27/139 (19%)

Query: 9   KALLRKYNVPVAKGV---VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           K + R   + V  GV     +S    E AI        VVK        G          
Sbjct: 108 KNIWRANGISVPAGVRLTAAASDAELERAIAEFGADGVVVKP-------GHDGSSIGVTK 160

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                    SL++ ++   E                    V VE+     RE  +++L D
Sbjct: 161 LDRDALSLHSLRAALNAAAE---------------RDAAEVLVEEYI-HGREFTVAIL-D 203

Query: 126 RTSGMVAFIASTQGGMDIE 144
             +  V  I + +G  D +
Sbjct: 204 GKALPVIEICAPEGSYDFQ 222


>gi|302330190|gb|ADL20384.1| Phosphoribosyl amino imidazole carboxylase ATPase subunit
           [Corynebacterium pseudotuberculosis 1002]
          Length = 401

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 53/182 (29%), Gaps = 44/182 (24%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L++   PV     I+SV  A +  +++ G + V K+                     GV 
Sbjct: 122 LKEMGAPVPPFAPITSVEDARAFWESVDGQVCV-KA-------------RRGGYDGHGVW 167

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              S   +   +  +L            G+    +  E    ++RE  LS +V RT    
Sbjct: 168 FPDSAMELEELVDRLL----------SAGTP---LMGEKKVQLVRE--LSAMVARTPSG- 211

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE---DVA----SLCDMLELQGQAR 184
                         V       I    + P  G+  E           +   L + G   
Sbjct: 212 -------EAQSWPVVESVQTDGICTEAVAPAPGLGEELEHQCRELSIRIATELGVTGALA 264

Query: 185 ID 186
           ++
Sbjct: 265 VE 266


>gi|297808323|ref|XP_002872045.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317882|gb|EFH48304.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 339

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 46/141 (32%), Gaps = 14/141 (9%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGA-DQDKVAAAFKIITSDSS 320
           YI   G IG +     L    +      G   +  + +GG   +        +   +D  
Sbjct: 184 YIHKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFADPQ 243

Query: 321 VKGI-LINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAE----SG 375
            +GI LI   GG    D         +KE   + P+V  + G     G R+       SG
Sbjct: 244 TEGIVLIGEIGGTAEEDAAAL-----IKESGTDKPVVAFIAGLTAPPGRRMGHAGAIVSG 298

Query: 376 LNVITAI---DLDDAAQKIVH 393
                      L DA  K+V 
Sbjct: 299 GKGTAQDKIKSLRDAGVKVVE 319


>gi|291227340|ref|XP_002733644.1| PREDICTED: phosphoribosylglycinamide formyltransferase,
           phosphoribosylglycinamide synthetase,
           phosphoribosylaminoimidazole synthetase-like
           [Saccoglossus kowalevskii]
          Length = 1023

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + ++ +P AK    +S   A   I T P    VVK+   A G+             
Sbjct: 110 AKAFMDRHMIPTAKWKSFTSAEDACQHINTAPYKALVVKASGLAAGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLI 92
            GV V ++ +     +RE++   L 
Sbjct: 157 -GVIVANTTEEACQAVREMMTDKLF 180


>gi|257467326|ref|ZP_05631637.1| carbamoyl phosphate synthase large subunit [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918455|ref|ZP_07914695.1| carbamoyl-phosphate synthase subunit large [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692330|gb|EFS29165.1| carbamoyl-phosphate synthase subunit large [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 1068

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 32/221 (14%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG--------- 55
           + L R+       P+    V+ S+         +  P+ V  +    G  G         
Sbjct: 128 RELFREAMEKIGEPILTSHVVESLEEGYKIANEIGYPVVVRPAYTLGGTGGGFAHNPQEL 187

Query: 56  -KGRFKELPADSKGGVRVESSL---KSVISDIREILGSTLITKQTGPTGSRV-----NCV 106
            +   K L     G V +E S+   K +  ++        IT         V     + +
Sbjct: 188 EEILLKGLSLSRVGQVLIERSILGWKEIEYEVIRDANGNAITVCNMENIDPVGIHTGDSI 247

Query: 107 YVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP----- 161
            V     +    Y   ++ R S  +       GG +++        +   + I+P     
Sbjct: 248 VVAPSQTLTDREYQ--MLRRASLKIVEEIGIIGGCNVQFALHPKSFEYAIIEINPRVSRS 305

Query: 162 ---LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFC 199
                  T   +A +   L +         ++    Y  F 
Sbjct: 306 SALASKATGYPIARVATKLAMGYLLDEVLNEVTGKTYACFE 346


>gi|256833621|ref|YP_003162348.1| phosphoribosylamine/glycine ligase [Jonesia denitrificans DSM
           20603]
 gi|256687152|gb|ACV10045.1| phosphoribosylamine/glycine ligase [Jonesia denitrificans DSM
           20603]
          Length = 436

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGP-LYVVKSQIHAGGRGKGRFKELPADS 66
           AK ++    VP A+  V ++++    A+  +     YVVK    A G+G     +  A  
Sbjct: 111 AKEVMAAAGVPTARPYVCTTMNDVTDALAAVGSDHPYVVKDDGLAAGKGVVVTTDRDAAL 170

Query: 67  KGGVRVESSLKSVISDI--REILGSTLITKQTGPTGSRVNCV 106
                      +  + +   E L    ++      G+ V  +
Sbjct: 171 AHAQACLEGRDAAHAKVVIEEYLDGPEVSVFVVSDGTTVRAL 212


>gi|110834877|ref|YP_693736.1| phosphoribosylamine-glycine ligase [Alcanivorax borkumensis SK2]
 gi|110647988|emb|CAL17464.1| phosphoribosylamine-glycine ligase [Alcanivorax borkumensis SK2]
          Length = 432

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L + N+P       + +  A + ++    P+ V+K+   A G+              
Sbjct: 113 KDFLARQNIPTGAYGNFTDMDEALAYVREQGAPI-VIKADGLAAGK-------------- 157

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     +R++L       + G  G RV    VE+  +   E    ++VD  +
Sbjct: 158 GVIVAMTLQEAEDAVRDMLD----GNKFGDAGHRV---VVEEFLE-GEEASFIVMVDGKN 209

Query: 129 GMVA 132
            +  
Sbjct: 210 VLPM 213


>gi|332797788|ref|YP_004459288.1| biotin carboxylase subunit of acetyl-CoA carboxylase [Acidianus
           hospitalis W1]
 gi|332695523|gb|AEE94990.1| biotin carboxylase subunit of acetyl-CoA carboxylase [Acidianus
           hospitalis W1]
          Length = 513

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
             K + +   VP+A G    +SS+  A    + +  P+ V K+    GG G
Sbjct: 123 DGKRVAKMAGVPIAPGSDGPVSSLDEALKIAEKIGYPIMV-KAASGGGGVG 172


>gi|332686643|ref|YP_004456417.1| carbamoyl-phosphate synthase large chain [Melissococcus plutonius
           ATCC 35311]
 gi|332370652|dbj|BAK21608.1| carbamoyl-phosphate synthase large chain [Melissococcus plutonius
           ATCC 35311]
          Length = 1061

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L+ K N P+ +  ++ +V  A S    +  P+ V
Sbjct: 133 KQLMEKLNQPIPESEIVHTVEEAVSFTNKIGYPVIV 168


>gi|330953069|gb|EGH53329.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae Cit 7]
          Length = 242

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|322436920|ref|YP_004219132.1| hypothetical protein AciX9_3344 [Acidobacterium sp. MP5ACTX9]
 gi|321164647|gb|ADW70352.1| hypothetical protein AciX9_3344 [Acidobacterium sp. MP5ACTX9]
          Length = 341

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+ +  +   K  VI     A +A + L  P+ VVK  I   G G  RF  +        
Sbjct: 108 LMEELGIAYPKARVIHRASQAPAATEGLRFPV-VVKPNIGGSGAGVKRFDHISQLEAAAA 166

Query: 71  RVESSLKSVI 80
           +      ++ 
Sbjct: 167 QPADHPDALA 176


>gi|298370199|ref|ZP_06981515.1| carbamoyl-phosphate synthase, large subunit [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298281659|gb|EFI23148.1| carbamoyl-phosphate synthase, large subunit [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 1071

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKND 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|297545503|ref|YP_003677805.1| D-alanine/D-alanine ligase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843278|gb|ADH61794.1| D-alanine/D-alanine ligase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 359

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 52/201 (25%), Gaps = 64/201 (31%)

Query: 9   KALLRKYNVPVAKGVVIS-----SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           K + ++  +P    VV+       +   +  I+ L  P +V               K   
Sbjct: 141 KRIFKEAGLPTPDFVVVYRKEIGDLETIKKKIEHLGYPCFV---------------KPAN 185

Query: 64  ADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
             S  G+    + + +   ++                     + +E G +  RE+  S+L
Sbjct: 186 LGSSVGITKVHNEEELPGALK-------------LAAKYDRKLLIEKGIE-AREIECSVL 231

Query: 124 VDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-------LCDM 176
            +                       + P+      I P       +          L   
Sbjct: 232 GN-----------------------ENPEASVAGEIVPSNEFYDYNAKYFDGGKSLLLIP 268

Query: 177 LELQGQARIDGGDLFPNLYKA 197
             L  +   +   L    Y+A
Sbjct: 269 APLPDEKMEEIRKLAIKAYRA 289


>gi|295702459|ref|YP_003595534.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Bacillus
           megaterium DSM 319]
 gi|294800118|gb|ADF37184.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Bacillus
           megaterium DSM 319]
          Length = 381

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K N+ V    ++++      A++T+  P  V   +    G+G+   K      + 
Sbjct: 112 KEMITKLNLDVPDYAIVTTEEELLKAVETIGYPCVVKTCRGGYDGKGQVLVKNENNIREA 171

Query: 69  GVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
              +  S   V   +   L   + +       G  V C+ V +       L+ +++  R 
Sbjct: 172 AELLAQSECIVEQWMN--LDKEVSVIVHRNAKGETV-CLPVAENIHKHHILHQTIVPARI 228

Query: 128 S 128
           +
Sbjct: 229 T 229


>gi|294497094|ref|YP_003560794.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Bacillus
           megaterium QM B1551]
 gi|294347031|gb|ADE67360.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Bacillus
           megaterium QM B1551]
          Length = 381

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K N+ V    ++++      A++T+  P  V   +    G+G+   K      + 
Sbjct: 112 KEMITKLNLDVPDYAIVTTEEELLKAVETIGYPCVVKTCRGGYDGKGQVLVKNENNIREA 171

Query: 69  GVRVESSLKSVISDIREILGSTL-ITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
              +  S   V   +   L   + +       G  V C+ V +       L+ +++  R 
Sbjct: 172 AELLAQSECIVEQWMN--LDKEVSVIVHRNAKGETV-CLPVAENIHKHHILHQTIVPARI 228

Query: 128 S 128
           +
Sbjct: 229 T 229


>gi|258616258|ref|ZP_05714028.1| carbamoyl phosphate synthase large subunit [Enterococcus faecium
           DO]
          Length = 325

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L++ ++P   G   +S   A      +  P+ V  S +  G
Sbjct: 160 DLFE-QA---LKELDIPQPLGDTATSKEEAVVIASRIGYPVLVRPSYVLGG 206


>gi|289577813|ref|YP_003476440.1| phosphoribosylamine/glycine ligase [Thermoanaerobacter italicus
           Ab9]
 gi|289527526|gb|ADD01878.1| phosphoribosylamine/glycine ligase [Thermoanaerobacter italicus
           Ab9]
          Length = 419

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KYN+P  +         A   +K    P+ V+K+   A G+G    K+       
Sbjct: 107 KQLLSKYNIPTGRFRAFDKYQEALKFLKEAWYPV-VMKADGLAQGKGVFIVKDFI----- 160

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                        + +E+L   +  +  G +G  V    +E+     +E  +    D  +
Sbjct: 161 -------------EAKEVLDLMMKKRIFGASGDIV---IIEEML-FGKEASVFAFTDGEN 203

Query: 129 GMVAFIA 135
            +    A
Sbjct: 204 ILPMVSA 210


>gi|226356296|ref|YP_002786036.1| ribosomal protein S6 modification protein RimK [Deinococcus deserti
           VCD115]
 gi|226318286|gb|ACO46282.1| putative Ribosomal protein S6 modification protein RimK; putative
           Lysine biosynthesis protein lysX [Deinococcus deserti
           VCD115]
          Length = 288

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 13/77 (16%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L    +   +  V     +A   I++L  P+ V+K  + + GR   R  +          
Sbjct: 98  LHAAGIATPRTGVAFDGESALQLIESLGYPV-VLKPTVGSWGRMVSRLND---------- 146

Query: 72  VESSLKSVISDIREILG 88
                   + + +E+LG
Sbjct: 147 --RDAAEAVIEHKEVLG 161


>gi|222475441|ref|YP_002563858.1| phosphoribosylamine-glycine ligase (purD) [Anaplasma marginale str.
           Florida]
 gi|255003427|ref|ZP_05278391.1| phosphoribosylamine--glycine ligase [Anaplasma marginale str.
           Puerto Rico]
 gi|255004547|ref|ZP_05279348.1| phosphoribosylamine--glycine ligase [Anaplasma marginale str.
           Virginia]
 gi|222419579|gb|ACM49602.1| phosphoribosylamine-glycine ligase (purD) [Anaplasma marginale str.
           Florida]
          Length = 420

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +YN+P AK      + +A+  +K    P  VVK+   A G+              
Sbjct: 107 KELCARYNIPTAKHGYFMDIGSAKQFVKRSKLP-LVVKADGPAQGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +L+     +  +L    +  + G  G     V VE+  D  +E+    L+D T+
Sbjct: 152 GVIICHTLEETYDALDAML----VQGKFGKAG---EAVVVEEFLD-GKEVSFLTLIDGTN 203

Query: 129 GMVAFIASTQG 139
                + + Q 
Sbjct: 204 --PVVLGAVQD 212


>gi|167756066|ref|ZP_02428193.1| hypothetical protein CLORAM_01586 [Clostridium ramosum DSM 1402]
 gi|237734052|ref|ZP_04564533.1| carbamoyl-phosphate synthase large subunit [Mollicutes bacterium
           D7]
 gi|167704058|gb|EDS18637.1| hypothetical protein CLORAM_01586 [Clostridium ramosum DSM 1402]
 gi|229382878|gb|EEO32969.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. D7]
          Length = 1072

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 61/187 (32%), Gaps = 38/187 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + +A+  V ++V  A +  + L  P+ V  +    G                
Sbjct: 133 KKEMDKLGIEMARSEVSTTVEEALAIAERLGYPVVVRPAYTMGG---------------A 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  +  +++ + + +   L ++L+ +             +E+      EL + ++ D  +
Sbjct: 178 GGGLVYNVEELKTVVSRGLQASLVGQC-----------LIEESILGWEELEVEVVRDANN 226

Query: 129 GMV--AFIASTQGGMDIEEVAKDYPQKIFKLL-IDPLIGVTS---EDVASLCDMLELQGQ 182
            M+   FI       +I+ +             +     V     +    + + + + G 
Sbjct: 227 NMITVCFI------ENIDPLGVHTGDSFCSAPMLTISQEVQDRLKDQAFRIVESIGVIGG 280

Query: 183 ARIDGGD 189
             +    
Sbjct: 281 TNVQFAH 287



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 8/141 (5%)

Query: 17  VPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSL 76
           +P+ +  +  +V  A    K +  PL V  S +  G   +  + +   +      V  + 
Sbjct: 680 IPMPESGMAVNVEEALEIAKRIGYPLMVRPSYVLGGRGMEVVYDDESLEQYMKAAVGVTP 739

Query: 77  KSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIAS 136
              I   R +  +          G  V           + E ++ L    +      + S
Sbjct: 740 DRPILIDRFLNNAMECEADAISDGETV-------FVPAVME-HIELAGIHSGDSACILPS 791

Query: 137 TQGGMDIEEVAKDYPQKIFKL 157
               +   E  K+Y +KI K 
Sbjct: 792 KHIPIRHLETIKEYTKKIAKE 812


>gi|53803859|ref|YP_114289.1| carbamoyl-phosphate synthase, large subunit [Methylococcus
           capsulatus str. Bath]
 gi|53757620|gb|AAU91911.1| carbamoyl-phosphate synthase, large subunit [Methylococcus
           capsulatus str. Bath]
          Length = 1072

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 41/154 (26%), Gaps = 33/154 (21%)

Query: 14  KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVE 73
           K  + V K  V  S+  A S +  +  P  +         R                 + 
Sbjct: 138 KIGLSVPKSEVAHSLEEALSVLDMVGYPAII---------RPSFTLGGSGGG------IA 182

Query: 74  SSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF 133
            + +  +                G   S  + + +E+     +E  + ++ DR    +  
Sbjct: 183 YNREEFVEICER-----------GLELSPTHELLIEESVLGWKEYEMEVVRDRADNCIIV 231

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                    IE +          + + P   +T 
Sbjct: 232 -------CSIENLDPMGVHTGDSITVAPAQTLTD 258


>gi|305432825|ref|ZP_07401983.1| carbamoyl-phosphate synthase, large subunit [Campylobacter coli
           JV20]
 gi|304443979|gb|EFM36634.1| carbamoyl-phosphate synthase, large subunit [Campylobacter coli
           JV20]
          Length = 1095

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 49/171 (28%), Gaps = 35/171 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  ++K  + ++K +   +   A  A+  +  PL +  S    G                
Sbjct: 137 KECMKKIGMDLSKSMYAYNYDEALKAVDEIGFPLMIRASYTLGG---------------T 181

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  ++          L  +            ++ + +E+     +E  + ++ D+  
Sbjct: 182 GSGVVYNMDEFKELANTALALS-----------PIHEILIEESLLGWKEYEMEVIRDKND 230

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS--EDVASLCDML 177
             +           IE +          + + P + +T     V       
Sbjct: 231 NCIIV-------CSIENLDPMGVHTGDSITVAPALTLTDKEYQVMRNASFA 274


>gi|301615335|ref|XP_002937132.1| PREDICTED: propionyl-CoA carboxylase alpha chain,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 710

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 52/176 (29%), Gaps = 28/176 (15%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +   V    G   V+     A    + +  P+ +  S                 
Sbjct: 161 ESKLLAKNAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKAS---------------AG 205

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +      R        + Q   +    + + +E   D  R + + +L 
Sbjct: 206 GGGKGMRIAWDDEETREGFR-------FSAQEAASSFGDDRLLIEKFIDNPRHIEIQVLA 258

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL 179
           D+    +      +    I+   +   ++     +DP       E   +L   ++ 
Sbjct: 259 DKHGNALWL---NERECSIQRRNQKVVEEAPSTFLDPETRRAMGEQAVALAKAVKY 311


>gi|258645189|ref|ZP_05732658.1| carbamoyl-phosphate synthase, large subunit [Dialister invisus DSM
           15470]
 gi|260402538|gb|EEW96085.1| carbamoyl-phosphate synthase, large subunit [Dialister invisus DSM
           15470]
          Length = 1067

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 47/205 (22%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+ +  +   KG ++ SV  A    + L  PL V  S +  G                 +
Sbjct: 672 LMGQLGIARPKGCLVESVEEAMEKTQDLDYPLIVRPSYVLGG---------------RAM 716

Query: 71  RVESSLKSVISDIREIL---GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
           ++      +   ++E +       +       G  V    + DG D+             
Sbjct: 717 QIVYDQAELRQYLKEAVVASHEHPVLIDQYMVGREVEVDAISDGIDV------------- 763

Query: 128 SGMVAFIASTQ--GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
             +   +   +  G    + +A   PQ + +  I+ L   T      +   + ++G   I
Sbjct: 764 -CIPGIMEQIERSGVHSGDSIAVYPPQHLTQETIETLTDYT----RKIARAMNVKGLINI 818

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINP 210
               +   +Y         ++E+NP
Sbjct: 819 QFIVVGNKVY---------VIEVNP 834


>gi|229493008|ref|ZP_04386803.1| phosphoribosylglycinamide formyltransferase 2 [Rhodococcus
           erythropolis SK121]
 gi|229320038|gb|EEN85864.1| phosphoribosylglycinamide formyltransferase 2 [Rhodococcus
           erythropolis SK121]
          Length = 411

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 28/105 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      S+   ++A   +  P  V+K  + + G+G+             VR    
Sbjct: 140 GLPTSPYAFADSLAEVQAATDRIGFPC-VIKPVMSSSGKGQST-----------VRSAED 187

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVN--CVYVEDGADILREL 118
           L +                     G RVN   V VE   D   E+
Sbjct: 188 LDAAWDYAM--------------AGGRVNHGRVIVEGFVDFDYEI 218


>gi|154148512|ref|YP_001406767.1| signal peptide peptidase SppA, 36K type [Campylobacter hominis ATCC
           BAA-381]
 gi|153804521|gb|ABS51528.1| signal peptide peptidase SppA, 36K type [Campylobacter hominis ATCC
           BAA-381]
          Length = 291

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 15/96 (15%)

Query: 292 APANFLDVGGGA---DQDKVAAAFKIITSDSSVKGILINI--FGGIMRCDVLVKGILSAV 346
             AN  ++       D + V       + + ++K +L NI   GG +   V    I  A+
Sbjct: 44  EQANLAEIRLNDAIMDANDVLEKIYASSDNENIKAVLFNIDSPGGALSPSV---EISKAI 100

Query: 347 KEVKINIPLVMRLEGANVD-------IGNRLIAESG 375
           KE+    P+++   G              +++A  G
Sbjct: 101 KELNEKKPVIVYASGTMASGSYLSGVWARKILANEG 136


>gi|262395456|ref|YP_003287309.1| protein acetyltransferase [Vibrio sp. Ex25]
 gi|262339050|gb|ACY52844.1| protein acetyltransferase [Vibrio sp. Ex25]
          Length = 877

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L + +   V    + S    A    + +  P+ V         + +       +D  G  
Sbjct: 485 LFKLFGFNVLPTWIASDDIEAVHMAENIGYPVAV---------KLRSPDIPHKSDVHGVA 535

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LRELYLSLLVDRTS 128
               + + V +    IL +  ++  +      V+ + V+  A +    EL +S+ VD+  
Sbjct: 536 LNLRNSREVSNAALSILDTVKLSYPSAN----VHGLLVQGMAKLGSAEELRISIAVDKVF 591

Query: 129 GMVAFIASTQGGMDIE 144
           G V  +   QGG +  
Sbjct: 592 GPVILLG--QGGSEWN 605


>gi|20807691|ref|NP_622862.1| methylaspartate mutase [Thermoanaerobacter tengcongensis MB4]
 gi|20516240|gb|AAM24466.1| methylaspartate mutase [Thermoanaerobacter tengcongensis MB4]
          Length = 447

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 7/135 (5%)

Query: 253 IEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAF 312
           ++ K  +  Y  +   + C     GL M    ++       A    +G GA+   + A  
Sbjct: 56  LKGKIGDFEYKEM---LACSSAAGGLKMTVHGLVYDMTVRAAKEAALGAGANIKLITAGK 112

Query: 313 KIITSDSSVKGILINIF---GGIMRCD-VLVKGILSAVKEVKINIPLVMRLEGANVDIGN 368
              T    +K I  NI    GG+   D          + E+K+N+P++      N +   
Sbjct: 113 LRRTDLEKIKEIKPNIILLAGGVDYGDRETALYNGEKLAELKLNVPVIYAGNIENREEIA 172

Query: 369 RLIAESGLNVITAID 383
            +  E+G  V    +
Sbjct: 173 YIFKEAGQEVYIVDN 187


>gi|126461634|ref|YP_001042748.1| carbamoyl-phosphate synthase L chain, ATP-binding [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126103298|gb|ABN75976.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 666

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 60/214 (28%), Gaps = 31/214 (14%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L ++  V    G   +I+    A      +  P+ +  S                  
Sbjct: 119 SKKLAKEAGVSTVPGYMGLIADADEAVKISNEIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  S   V             +K         + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWSEAEVKEGFE-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLAD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
                V      +    I+   +   ++     +D        E   +L   +       
Sbjct: 217 NHGNCVYL---HERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQACALAKAVGYASAGT 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
                D   N Y  F + +  L   +P+  +  G
Sbjct: 274 VEFIVDGQKNFY--FLEMNTRLQVEHPVTELITG 305


>gi|34763389|ref|ZP_00144340.1| Phosphoribosylamine--glycine ligase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886934|gb|EAA24055.1| Phosphoribosylamine--glycine ligase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 426

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 25/138 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++KY V  AK    +    A   +  +  P+ V+K+   A G+             
Sbjct: 106 AKDFMKKYGVKTAKYQSFTDKEKAIKYLDEMSYPV-VIKASGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV +  + K         L   +  K     G   + V +E+  D +    +S+L    
Sbjct: 152 -GVVIAQNRKE----AENTLNDMMTNKVFAAAG---DTVVIEEFLDGVE---ISVLSITD 200

Query: 128 SGMVAFIASTQGGMDIEE 145
           S ++    S +    I E
Sbjct: 201 SEVILPFISAKDHKKISE 218


>gi|330937687|gb|EGH41585.1| Urea amidolyase-related protein [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 791

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 23/121 (19%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A  T+  P+                 K      
Sbjct: 129 ARALARQHGVPMLEGTELLDSLESAIAAAHTIGYPVM---------------LKSTAGGG 173

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 174 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 226

Query: 127 T 127
            
Sbjct: 227 Q 227


>gi|330898476|gb|EGH29895.1| Urea amidolyase-related protein [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 698

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 23/119 (19%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A  T+  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSLESAIAAAHTIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
             G+RV  S + +      +    L        G     V++E      R L + +  D
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGD 215


>gi|329956475|ref|ZP_08297072.1| phosphoribosylamine--glycine ligase [Bacteroides clarus YIT 12056]
 gi|328524372|gb|EGF51442.1| phosphoribosylamine--glycine ligase [Bacteroides clarus YIT 12056]
          Length = 424

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 26/130 (20%)

Query: 8   AKALLRKYNVPVA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  + ++N+P A  K V   ++    + ++TL  P YV+K+     G+           
Sbjct: 110 AKEFMLRHNIPTARYKSVTAETLEEGLAFLETLTAP-YVLKADGLCAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    +++E+L            G     V +E+      E  + +L D
Sbjct: 158 ---GVLILPTLEEARKELKEMLSGMF--------GDASATVVIEEFLS-GIECSVFVLSD 205

Query: 126 RTSGMVAFIA 135
                V  +A
Sbjct: 206 GEHYKVLPVA 215


>gi|298714850|emb|CBJ25749.1| propionyl-CoA carboxylase, alpha subunit [Ectocarpus siliculosus]
          Length = 596

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 36/206 (17%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K +  +  V    G   +I S   A    + +  P+ +  S                 
Sbjct: 170 ESKKIAAEAGVHTIPGFKGIIESGDEAVRIAEEIGYPVMIKAS---------------AG 214

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +   S         + +      G  +   Y+EDG  I     + +L 
Sbjct: 215 GGGKGMRIAYDAEDARSGFERSTAEAISS---FGDGRMLVEKYIEDGHHIE----IQVLA 267

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D    + AF    +    ++   +   ++    LI P +     E    L      +   
Sbjct: 268 DSHGNVAAF---PERECSVQRRNQKVLEESPSCLITPEVRAAMQEQAIMLSKATGYRSAG 324

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN 209
            ++             D     LE+N
Sbjct: 325 TVEMI--------CASDLSFYFLEMN 342


>gi|224476186|ref|YP_002633792.1| phosphoribosylamine--glycine ligase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420793|emb|CAL27607.1| putative phosphoribosylamine--glycine ligase PurD [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 415

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 15/79 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KY +P A+ V + S   A   ++    P+ + K                   + 
Sbjct: 107 AKRIMEKYGIPTAEYVEVDSKSEALKYVEDCKIPVVLKK---------------DGLAAG 151

Query: 68  GGVRVESSLKSVISDIREI 86
            GV +  + +     +  +
Sbjct: 152 KGVIIAMTREEAKEAVETL 170


>gi|189054903|dbj|BAG37887.1| unnamed protein product [Homo sapiens]
          Length = 703

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 154 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 198

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 199 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 251

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 252 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 308

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 309 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 341


>gi|138519856|gb|AAI35129.1| LOC100125119 protein [Xenopus (Silurana) tropicalis]
          Length = 2232

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA      S+  A++A + L  P+ V  +    G
Sbjct: 526 MEEIGEHVAPSEAAFSLEQAQAAAERLGYPVLVRSAYALGG 566


>gi|116873270|ref|YP_850051.1| carbamoyl phosphate synthase large subunit [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|123458554|sp|A0AJU0|CARB_LISW6 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|116742148|emb|CAK21272.1| carbamoyl-phosphate synthase, large subunit [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 1070

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A S ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYSFVERIGYPVIVRPAYTLGGSGG 179


>gi|78189743|ref|YP_380081.1| carbamoyl-phosphate synthase, large subunit [Chlorobium
           chlorochromatii CaD3]
 gi|78171942|gb|ABB29038.1| carbamoyl-phosphate synthase large subunit [Chlorobium
           chlorochromatii CaD3]
          Length = 621

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 42/204 (20%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL +  +P        S+  A++  + +  P  V  S +  G                 
Sbjct: 212 ALLVELGIPHPAYGTAISLEEAKAITQRIGYPALVRPSYVLGG---------------RA 256

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
           +++  +  S+   I + L       +  P       + ++   +   E  +  L D T  
Sbjct: 257 MKIVYNDDSLKEYIDQALF----ISEKYP-------LLIDRFLETAVEFDIDALADSTDC 305

Query: 130 MVAFIASTQGGMDIEEVAKDYP---QKIFKLLIDPLIGVTSEDVASLCDMLELQGQARID 186
           +++ I        I             I K  I        E    L   L + G   + 
Sbjct: 306 VISGIMQHVEAAGIHSGDSTSILPYHNISKQAI----AAMKEYTRMLAKSLNVIGLMNVQ 361

Query: 187 GGDLFPNLYKAFCDKDMSLLEINP 210
                  +Y         ++E+NP
Sbjct: 362 YAVQNDTVY---------VIEVNP 376


>gi|290580681|ref|YP_003485073.1| carbamoylphosphate synthetase large subunit [Streptococcus mutans
           NN2025]
 gi|254997580|dbj|BAH88181.1| carbamoylphosphate synthetase large subunit [Streptococcus mutans
           NN2025]
          Length = 1059

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           ++ E QA   L+  N+P   G   ++   A  + + +  P+ V  S +  G
Sbjct: 668 DLFE-QA---LKDLNIPQPPGQTATNEEEAIVSARKIGFPVLVRPSYVLGG 714


>gi|217979003|ref|YP_002363150.1| phosphoribosylamine/glycine ligase [Methylocella silvestris BL2]
 gi|217504379|gb|ACK51788.1| phosphoribosylamine/glycine ligase [Methylocella silvestris BL2]
          Length = 449

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 23/115 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK    ++++P A      +   A++  +    P+ VVK+   A G+             
Sbjct: 125 AKEFCARFSIPTAAFGRFEAPAPAKAYAREKGAPI-VVKADGLAAGK------------- 170

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSL 122
            GV V  SL    + I  +          G  G  V    +E+        + +L
Sbjct: 171 -GVIVAMSLSEAEAAIDMMF-----EGAFGAAGQTV---VIEEFLSGEEASFFAL 216


>gi|206891197|ref|YP_002249059.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743135|gb|ACI22192.1| carbamoyl-phosphate synthase, large subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 1105

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 37/165 (22%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L ++      + V +   + S+     AI  +  P  +  +    G            
Sbjct: 129 RELFKQAMTKIGLEVPRSAAVHSLKEGLEAIDYIGFPAILRPAFTLGG------------ 176

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            + GGV    +++     +             G   S V+ V +E+     +E  L ++ 
Sbjct: 177 -TGGGV--AYNIEEFKELLER-----------GLKLSPVSQVLIEESLLGWKEFELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED 169
           D+ S  V  + S      IE            + + P+  +T  +
Sbjct: 223 DK-SDNVVIVCS------IENFDPMGVHTGDSITVAPVQTLTDRE 260


>gi|90418034|ref|ZP_01225946.1| carbamoyl-phosphate synthase large chain [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337706|gb|EAS51357.1| carbamoyl-phosphate synthase large chain [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 1143

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +   +  +  SV  A   +  +  P+ V  S +  G
Sbjct: 744 RLLNELGLRQPRNGIARSVDEARDIVARIGYPVVVRPSYVLGG 786


>gi|1303913|dbj|BAA12569.1| YqhX [Bacillus subtilis]
          Length = 450

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 24/126 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +++  VP+  G   +I +V  A S    +  P+ ++K+                  
Sbjct: 119 ARETMKQAGVPIVPGSQGIIENVEEAVSLANEIGYPV-IIKA--------------TAGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + +        ++    IT+Q   T  R   VY+E   +  R + + +L D
Sbjct: 164 GGKGIRVARTEEE-------LINGIKITQQEAATAFRNPGVYIEKYIEDFRHVEIQVLAD 216

Query: 126 RTSGMV 131
                +
Sbjct: 217 NYGNTI 222


>gi|13474206|ref|NP_105774.1| hypothetical protein mlr5043 [Mesorhizobium loti MAFF303099]
 gi|14024958|dbj|BAB51560.1| mlr5043 [Mesorhizobium loti MAFF303099]
          Length = 694

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 72/217 (33%), Gaps = 28/217 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AKA L K  +PV KG    +   A  +   L  P+ +           K       +
Sbjct: 486 EAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVAL-----------KALGVTHKS 534

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +           +SV +   ++L           TG  V    V DG     EL +    
Sbjct: 535 EVGAVRLNLKDAESVSTAAHDLLPL--------GTGLYVER-MVRDGV---AELIVGFTR 582

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D   G V  + +  GG+ +E +       +     D    +    +  L +    + +A 
Sbjct: 583 DPMFGAVMTLGT--GGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD 640

Query: 185 IDGGDLFPNLYKAFCDKDMSLLE---INPLIIMKNGR 218
           +            F  K+   +E   INPLI+   G+
Sbjct: 641 VAAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGK 677


>gi|152966394|ref|YP_001362178.1| pyruvate, water dikinase [Kineococcus radiotolerans SRS30216]
 gi|151360911|gb|ABS03914.1| Pyruvate, water dikinase [Kineococcus radiotolerans SRS30216]
          Length = 434

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 12 LRKYNVPVAKGVVISSV-------HAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
          LR   +PV  GVV+ +        H  E  ++ L G  + V+S        +  F     
Sbjct: 22 LRHAGLPVPPGVVVLNALDGDHWQHELEPVLRALGGGPFAVRSSAAGEDGQRVSFAGQLH 81

Query: 65 DSKGGVRVESSLKSVI 80
             G       ++ V 
Sbjct: 82 THLGARTPAEVVREVR 97


>gi|332160627|ref|YP_004297204.1| putative acetyltransferase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664857|gb|ADZ41501.1| putative acetyltransferase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 880

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L  Y + +    + S    A    + L  P+ +         + +    
Sbjct: 481 LDTHEVQ--PILEAYGLSMLPTWIASDSVEAVHIAEQLGYPVAI---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V     +IL     T        R++ + V+  A+    +EL
Sbjct: 530 AHKSEVQGVMLYLRTAMEVQRAADDILDRVKRTYPQA----RIDGLLVQSMANRAGAQEL 585

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEE 145
            +++  D   G +  +   +GG++   
Sbjct: 586 RIAVEQDAIFGPLIMLG--EGGIEWHH 610


>gi|319783251|ref|YP_004142727.1| acetyl-CoA carboxylase, biotin carboxylase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169139|gb|ADV12677.1| acetyl-CoA carboxylase, biotin carboxylase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 447

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 62/206 (30%), Gaps = 37/206 (17%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK   ++  +PV  G    ++    A      +  P+ ++K+    GGRG         
Sbjct: 118 EAKRTAKRLGIPVVPGSDGAVTDQKEARRIAAEIGYPV-IIKASAGGGGRGMKV------ 170

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                   E+ L+  +       G+                VY+E   +  R + + +  
Sbjct: 171 -----ALTEADLEVALQTASTEAGAAFGDD----------AVYIEKYLEKPRHIEVQVFG 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQA 183
           D     V F    +    ++   +   ++     ++           A     L   G  
Sbjct: 216 DGFGRGVHF---GERDCSLQRRHQKVWEEAPSPALNAEERARIGGICAKAIADLGYSGAG 272

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEIN 209
            I+           + + +   +E+N
Sbjct: 273 TIEF---------LYENGEFYFIEMN 289


>gi|315282747|ref|ZP_07871082.1| phosphoribosylamine--glycine ligase [Listeria marthii FSL S4-120]
 gi|313613599|gb|EFR87408.1| phosphoribosylamine--glycine ligase [Listeria marthii FSL S4-120]
          Length = 420

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 15/80 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + KY +P A     +    A++ +     P+ V+K+   A G+             
Sbjct: 107 AKQFMEKYAIPTAASKTFTDYDEAKAYLDKRGVPI-VIKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V   ++  +  ++++L
Sbjct: 153 -GVTVALEMEEAVLALKDML 171


>gi|210624283|ref|ZP_03294299.1| hypothetical protein CLOHIR_02255 [Clostridium hiranonis DSM 13275]
 gi|210153125|gb|EEA84131.1| hypothetical protein CLOHIR_02255 [Clostridium hiranonis DSM 13275]
          Length = 418

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + + ++P AK    + +  A + I +   P+ V+K+   A G+             
Sbjct: 108 SKDFMIRNDIPTAKYKEYTDLDEAIAEIDSFGYPV-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +  I+ ++E+    +  K+ G  G   N V +E+  
Sbjct: 154 -GVVIPENREDAITTLKEM----MADKKFGDAG---NKVVIEEFL 190


>gi|90407136|ref|ZP_01215324.1| phosphoribosylamine--glycine ligase [Psychromonas sp. CNPT3]
 gi|90311712|gb|EAS39809.1| phosphoribosylamine--glycine ligase [Psychromonas sp. CNPT3]
          Length = 428

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  L ++N+P A     + V  A + ++    P+ V+K+   A G+             
Sbjct: 108 SKDFLARHNIPSAYYKNFTEVAPALAYVREQGAPI-VIKADGLAAGK------------- 153

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L    + ++++L         G  G RV    +E+  +   E    +LVD  
Sbjct: 154 -GVIVALTLAEAENAVQDMLA----GNAFGEAGHRV---VIEEFLE-GEEASFIVLVDGK 204

Query: 128 SGMVAFIASTQG 139
           +  V  +A++Q 
Sbjct: 205 N--VVAMATSQD 214


>gi|319900747|ref|YP_004160475.1| CoA-binding domain protein [Bacteroides helcogenes P 36-108]
 gi|319415778|gb|ADV42889.1| CoA-binding domain protein [Bacteroides helcogenes P 36-108]
          Length = 687

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 68/224 (30%), Gaps = 28/224 (12%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           ALL    +PV +  V ++     +  +    P+         G   K     +  + KG 
Sbjct: 490 ALLHSAGIPVVEEFVSANREEVLAFARRAGYPVVA----KVVGPVHKSDVGGVVLNIKGD 545

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSG 129
             +      ++                      V  + V+   +   EL++    +   G
Sbjct: 546 QHLALEFDRMMQIPE------------------VTGIMVQPMLE-GTELFIGAKYEEKFG 586

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQARIDGG 188
            V       GG+ +E +             +    + S     +       +G       
Sbjct: 587 HVVL--CGLGGIFVEVLKDVSSGLAPLSYEEAYSMIHSLRAYKIIKGTRGQKGVNEDKFA 644

Query: 189 DLFPNLYKAFC-DKDMSLLEINPLIIMKNGRLRVLDSKISFDDN 231
           ++   L        ++  ++INPL+  +   +  +D++I  + +
Sbjct: 645 EIIVRLSTLLRFATEIKEMDINPLLATE-KEVIAVDARIRIEKD 687


>gi|317490562|ref|ZP_07949038.1| carbamoyl-phosphate synthase [Eggerthella sp. 1_3_56FAA]
 gi|316910342|gb|EFV31975.1| carbamoyl-phosphate synthase [Eggerthella sp. 1_3_56FAA]
          Length = 1078

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 33/156 (21%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           + +  +  ++     S+  AE  +  L  P+ +  S    G                G  
Sbjct: 136 MAELGIETSRSGYAYSIADAEDIVAELGYPVVLRPSFTLGG---------------AGGG 180

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           +      +   + + L       +  P G     V VE+  +  +E  + ++ DR    +
Sbjct: 181 IAHDAAELHEIVGQGL-------ELSPAGE----VLVEESIEGWKEYEMEVMRDRAGNGI 229

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
                      IE            + + P   ++ 
Sbjct: 230 IV-------CSIENFDAMGVHTGDSITVAPAQTLSD 258


>gi|295394635|ref|ZP_06804854.1| acetyl-coA carboxylase carboxyl transferase subunit alpha
           [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972528|gb|EFG48384.1| acetyl-coA carboxylase carboxyl transferase subunit alpha
           [Brevibacterium mcbrellneri ATCC 49030]
          Length = 740

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 16/98 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K L+    VP+   +   S+  A+           +VK+    GGRG      + A   
Sbjct: 150 SKELMDAAGVPILTNMEPDSITEADL--------PVLVKASAGGGGRGMRVADSMDA--- 198

Query: 68  GGVRVESSLKSVISDIREILG-STLITKQTGPTGSRVN 104
               +  +++S   + +   G ST+  ++  P G  V 
Sbjct: 199 ----LAETIESAKREAQSAFGDSTVFCERYIPAGHHVE 232


>gi|291008047|ref|ZP_06566020.1| phosphoribosylamine--glycine ligase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 420

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 29/128 (22%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A   ++ +    ++A+     P +VVK    AGG+             
Sbjct: 106 AKDVMLAAGVPTAHSEIVDNPAKLDAALHRFG-PTWVVKDDGLAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S   +  +    +L            G  V    +E   D         + D T
Sbjct: 152 -GVLVSSDFDAARAHALTLLD----------DGHPV---LLESFLDGPEASLFCFV-DGT 196

Query: 128 SGMVAFIA 135
           + +    A
Sbjct: 197 TVVPLLPA 204


>gi|256113452|ref|ZP_05454293.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 3 str. Ether]
 gi|265994840|ref|ZP_06107397.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 3 str. Ether]
 gi|262765953|gb|EEZ11742.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 3 str. Ether]
          Length = 452

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|242242880|ref|ZP_04797325.1| acetyl-CoA carboxylase [Staphylococcus epidermidis W23144]
 gi|242233655|gb|EES35967.1| acetyl-CoA carboxylase [Staphylococcus epidermidis W23144]
          Length = 452

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 24/124 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +++  VPV  G    + SV   +   K +  P+ V+K+                  
Sbjct: 118 ARQTVKQAGVPVIPGSNDAVQSVDEIKLLAKEIGFPV-VLKA-----------ASGGGGK 165

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               V+  S L   + + +                     VYVE    + + + + ++ D
Sbjct: 166 GIRIVKEASQLDQALKEAKSEGQKYFNDD----------RVYVEAFIPVAKHVEVQIIGD 215

Query: 126 RTSG 129
             + 
Sbjct: 216 GKNN 219


>gi|124023089|ref|YP_001017396.1| carbamoyl phosphate synthase large subunit [Prochlorococcus marinus
           str. MIT 9303]
 gi|123963375|gb|ABM78131.1| carbamoyl-phosphate synthase, large subunit [Prochlorococcus
           marinus str. MIT 9303]
          Length = 1102

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
           A+LR+  +   +  +  S   A +    +  P+ V  S +  G   +  F E   +    
Sbjct: 704 AILRQLQIRQPRNGLARSEEDARAVALRIGYPVVVRPSYVLGGRAMEVVFDEQELNRYMA 763

Query: 70  VRVESSLK 77
             V+    
Sbjct: 764 EAVQVEPD 771


>gi|38511843|gb|AAH60717.1| Cad protein [Mus musculus]
          Length = 1442

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           + +    VA     +S+  A++A + L  P+ V  +    G
Sbjct: 66  MAEIGEHVAPSEAANSLEQAQAAAERLGYPVLVRAAFALGG 106


>gi|329296838|ref|ZP_08254174.1| phosphoribosylamine/glycine ligase [Plautia stali symbiont]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L +  +P A+    + V  A + ++    P+ V+K+   A G+              
Sbjct: 109 KDFLARQQIPTAEYQNFTDVEPALAYLREKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L    + ++++L         G  G     + +E+  +   E    ++VD  +
Sbjct: 154 GVIVAMTLAEAEAAVQDMLA----GNAFGDAGH---RIVIEEFLN-GEEASFIVMVDGDN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|319951366|ref|ZP_08025191.1| phosphoribosylamine--glycine ligase [Dietzia cinnamea P4]
 gi|319434963|gb|EFV90258.1| phosphoribosylamine--glycine ligase [Dietzia cinnamea P4]
          Length = 418

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK ++    V  A+  ++ S    + A+     P +VVK    A G+G
Sbjct: 105 AKDVMAAAGVRTARAEIVDSPADLDEALDRFG-PTWVVKDDGLAAGKG 151


>gi|306840400|ref|ZP_07473165.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella sp. BO2]
 gi|306289638|gb|EFM60842.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella sp. BO2]
          Length = 436

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 102 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 156

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 157 SAEELPIALATARSEAGAA 175


>gi|161511139|ref|NP_539980.2| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 1 str. 16M]
 gi|225852418|ref|YP_002732651.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis ATCC 23457]
 gi|256044579|ref|ZP_05447483.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256264084|ref|ZP_05466616.1| acetyl-CoA carboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563930|ref|ZP_05834416.1| acetyl-CoA carboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|265991003|ref|ZP_06103560.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|225640783|gb|ACO00697.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella melitensis
           ATCC 23457]
 gi|260153946|gb|EEW89038.1| acetyl-CoA carboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|263001787|gb|EEZ14362.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263094288|gb|EEZ18149.1| acetyl-CoA carboxylase [Brucella melitensis bv. 2 str. 63/9]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|160933860|ref|ZP_02081248.1| hypothetical protein CLOLEP_02722 [Clostridium leptum DSM 753]
 gi|156867737|gb|EDO61109.1| hypothetical protein CLOLEP_02722 [Clostridium leptum DSM 753]
          Length = 426

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 7   QAKALLRKYNVPVAKGV-VISSVHAAESAIKTLPGPLYV 44
            A+  +R   VPV  G  +I+ +  A +  + +  P+ +
Sbjct: 95  MARKTMRNAGVPVTPGCDIITDIKEAAAVAEKIGYPVLI 133


>gi|170743520|ref|YP_001772175.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium sp.
           4-46]
 gi|168197794|gb|ACA19741.1| acetyl-CoA carboxylase, biotin carboxylase [Methylobacterium sp.
           4-46]
          Length = 451

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 32/206 (15%)

Query: 16  NVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +P V   +G V S    A      +  P+ + K+    GGRG          ++    +
Sbjct: 127 GIPCVPGSEGGV-SDPDEARRVAAEIGYPVLI-KAASGGGGRGM-------KVARSEEDL 177

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E++L +   + +   G                 VY+E   +  R + + +L D   G + 
Sbjct: 178 ETALATARIEAKAAFGDD--------------AVYIEKYLEKPRHIEVQVLGDGRGGAIH 223

Query: 133 FIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-SEDVASLCDMLELQGQARIDGGDLF 191
                +    ++   +   ++     ++P +        A     L   G   I+     
Sbjct: 224 L---AERDCSLQRRHQKVWEEGPSPALNPEMREQIGSICARAMQELGYTGAGTIEFLYED 280

Query: 192 PNLYKAFCDKDMSLLEINPLIIMKNG 217
              Y  F + +  +   +P+  M  G
Sbjct: 281 GAFY--FIEMNTRIQVEHPVTEMITG 304


>gi|17983030|gb|AAL52244.1| biotin carboxylase [Brucella melitensis bv. 1 str. 16M]
          Length = 459

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 125 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 179

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 180 SAEELPIALATARSEAGAA 198


>gi|22299351|ref|NP_682598.1| acetyl-CoA carboxylase biotin carboxylase subunit
           [Thermosynechococcus elongatus BP-1]
 gi|22295534|dbj|BAC09360.1| biotin carboxylase [Thermosynechococcus elongatus BP-1]
          Length = 453

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +++  VP   G   ++     A +  + +  P  ++K+    GGRG    +     
Sbjct: 120 AKATMQRVGVPTIPGSDGLVQDEETARAIARQIGYP-LMIKATAGGGGRGMRLVRSEE-- 176

Query: 66  SKGGVRVESSLKSVISDIREILGS 89
                 +  SL +   +     G+
Sbjct: 177 -----ELGRSLSAAQGEAEAAFGN 195


>gi|289435178|ref|YP_003465050.1| carbamoyl-phosphate synthase, large subunit [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171422|emb|CBH27966.1| carbamoyl-phosphate synthase, large subunit [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|260577939|ref|ZP_05845869.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603959|gb|EEW17206.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 385

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 44/182 (24%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+   PV     I S        + + G +  +K+                     GV 
Sbjct: 105 LRELGAPVPAFAAIESAEDIAGFFEAVGGQVC-LKA-------------RRGGYDGKGVW 150

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             +++      + ++L   +              +  E    ++RE  LS +V RT    
Sbjct: 151 FPATVDEARELVEKLLDKEIP-------------LMAEKKVTLVRE--LSAMVARTPSGE 195

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDV-------ASLCDMLELQGQAR 184
                 Q    +E + +D    I    + P    T E +         +   L + G   
Sbjct: 196 V-----QAWPAVESLQEDG---ICVEAVAPAPNSTPEILAAAEQLSRDVATELGVTGVLA 247

Query: 185 ID 186
           ++
Sbjct: 248 VE 249


>gi|227833003|ref|YP_002834710.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262182509|ref|ZP_06041930.1| carbamoyl phosphate synthase large subunit [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454019|gb|ACP32772.1| carbamoyl-phosphate synthase large chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 1113

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P       +S   A      +  P+ V  S +  GGRG
Sbjct: 698 KVLAEAELPAPAFGTATSFEEARQVASNIGYPVLVRPSYVL-GGRG 742


>gi|119629438|gb|EAX09033.1| propionyl Coenzyme A carboxylase, alpha polypeptide, isoform CRA_b
           [Homo sapiens]
          Length = 695

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 146 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 190

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 191 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 243

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 244 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 300

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 301 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 333


>gi|114650516|ref|XP_001148854.1| PREDICTED: propionyl-CoA carboxylase alpha chain, mitochondrial
           isoform 7 [Pan troglodytes]
          Length = 702

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 153 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 197

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 198 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 250

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 251 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 307

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 308 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 340


>gi|34540345|ref|NP_904824.1| carbamoyl-phosphate synthase large subunit [Porphyromonas
           gingivalis W83]
 gi|34396657|gb|AAQ65723.1| carbamoyl-phosphate synthase, large subunit [Porphyromonas
           gingivalis W83]
          Length = 1075

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L + NV   +   + SV  A  A + L  P+ V  +    G
Sbjct: 136 LDEINVKTIQSQAVESVEEARKAARELGYPVIVRAAYALGG 176


>gi|46849477|dbj|BAD17948.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
           synthetase-glycinamide ribonucleotide transformylase
           [Callorhinchus callorynchus]
          Length = 997

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  + ++++P A+    ++   A S I++      VVK+   A G+             
Sbjct: 94  AKDFMDRHSIPTARWKAFTNPQEACSFIQSADFSALVVKASGLAAGK------------- 140

Query: 68  GGVRVESSLKSVISDIREIL 87
            GV V +        +++IL
Sbjct: 141 -GVIVAADKAEACKAVQDIL 159


>gi|289422210|ref|ZP_06424066.1| phosphoribosylamine--glycine ligase [Peptostreptococcus anaerobius
           653-L]
 gi|289157360|gb|EFD05969.1| phosphoribosylamine--glycine ligase [Peptostreptococcus anaerobius
           653-L]
          Length = 422

 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++++P AK    + +  A++ I +   P+ V+K+   A G+             
Sbjct: 106 SKEFMVRHDIPTAKYKEYTDIEKAKAEIDSFGYPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV + ++ +  +    E L   +  K+ G  G  V    VE+  
Sbjct: 152 -GVVIPTTREEAL----ETLDIIMKDKKFGEAGDLV---VVEEFL 188


>gi|269957380|ref|YP_003327169.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269306061|gb|ACZ31611.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 391

 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 62/190 (32%), Gaps = 44/190 (23%)

Query: 12  LRKYNVPVAKGVVI-SSVHAAESAIKTLPGPLYVVKSQIHAGGR-GKGRFKELPADSKG- 68
           L +  +P  + V + +   AA S I           +   AG R G+   K       G 
Sbjct: 111 LTELGLPCPRWVPVPTDPDAARSVI-----------ADFLAGERDGEAVAKTSRGGYDGK 159

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GVRV SS   V   I               +G+    + VE+     REL  +L+  R S
Sbjct: 160 GVRVISSSDDVADWIEA-----------AASGAPP--LLVEEKVPFTREL-AALVARRPS 205

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-------DVASLCDMLELQG 181
           G V              V       +   +I P  G+++E           +   L + G
Sbjct: 206 GEV---------RTWPVVESIQRDGVCSEVIAPAPGISAELEERAEQIARDVATGLGVTG 256

Query: 182 QARIDGGDLF 191
              ++  +  
Sbjct: 257 VLAVELFEYL 266


>gi|218510488|ref|ZP_03508366.1| Carbamoyl-phosphate synthase L chain ATP-binding protein [Rhizobium
           etli Brasil 5]
          Length = 247

 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIK-TLPGPLYVVKS 47
           AK L++   VPV  G + S    A  A +  L G   ++K+
Sbjct: 119 AKQLMQAAGVPVTPGYLGSDQSEARLAAEADLVGYPVLIKA 159


>gi|189095269|ref|NP_001121164.1| propionyl-CoA carboxylase alpha chain, mitochondrial isoform b
           [Homo sapiens]
          Length = 702

 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 153 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 197

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 198 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 250

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 251 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 307

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 308 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 340


>gi|86356532|ref|YP_468424.1| phosphoribosylamine--glycine ligase [Rhizobium etli CFN 42]
 gi|86280634|gb|ABC89697.1| phosphoribosylamine-glycine ligase protein [Rhizobium etli CFN 42]
          Length = 427

 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 24/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K +  +Y +P       ++   A++ I+    P+ VVK+   A G+              
Sbjct: 107 KDICARYGIPTGAYQRFNNAPKAKAYIRAQGAPI-VVKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L   ++ + +           G  G+ V    V +      E     L D   
Sbjct: 152 GVTVAMTLDEALAAVDDCF-----EGAYGAAGAEV----VVEAYLEGEEASFFCLCDGKH 202

Query: 129 GMVAFIA 135
            +    A
Sbjct: 203 ALPLATA 209


>gi|313632744|gb|EFR99713.1| carbamoyl-phosphate synthase, large subunit [Listeria seeligeri FSL
           N1-067]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|260434185|ref|ZP_05788156.1| methylcrotonoyl-CoA carboxylase subunit alpha [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418013|gb|EEX11272.1| methylcrotonoyl-CoA carboxylase subunit alpha [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 643

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 41/189 (21%)

Query: 8   AKALLRKYNVPVAKGVVISS--VHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKAL+ +  +PV  G    +        A  T+  P+ + K+ +  GG    R  E PAD
Sbjct: 119 AKALMEQAGIPVVPGYHGDNQDPEHLAGAADTIGYPVLI-KA-VAGGGGKGMRLVERPAD 176

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                     L S   + R   G+                V VE      R + + +  D
Sbjct: 177 FAAA------LDSARGEARTAFGND--------------AVLVEKFVAKPRHIEVQVFGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSED-------VASLCDMLE 178
            T  +  F    +    ++   +   ++       P  G+T E             + + 
Sbjct: 217 GTHAVHLF----ERDCSLQRRHQKVIEEA------PAPGMTPEMREAMGQAGVRAAEAIG 266

Query: 179 LQGQARIDG 187
            +G   ++ 
Sbjct: 267 YKGAGTVEF 275


>gi|226224438|ref|YP_002758545.1| carbamoyl-phosphate synthetase (catalytic subunit) [Listeria
           monocytogenes Clip81459]
 gi|259585682|sp|C1KWD4|CARB_LISMC RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|225876900|emb|CAS05609.1| Putative carbamoyl-phosphate synthetase (catalytic subunit)
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|146281571|ref|YP_001171724.1| phosphoribosylglycinamide formyltransferase 2 [Pseudomonas stutzeri
           A1501]
 gi|172045568|sp|A4VIT1|PURT_PSEU5 RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|145569776|gb|ABP78882.1| phosphoribosylglycinamide formyltransferase 2 [Pseudomonas stutzeri
           A1501]
          Length = 393

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 29/139 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      ++    +A   L  P  V K  + + G+G+   +               
Sbjct: 126 GLPTSPYRFADTLDECRAAAMALGFPCLV-KPVMSSSGKGQSVLRSDA-----------D 173

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +     +               G     V VE   D   E  ++LL  R +G  +F  
Sbjct: 174 IDAAWEYAQA--------GGRAGRG----RVIVEGFIDFDYE--ITLLTVRHAGGTSFCE 219

Query: 134 -IASTQGGMDIEEVAKDYP 151
            +   Q   D +E  +  P
Sbjct: 220 PVGHRQEKGDYQESWQPQP 238


>gi|319780173|ref|YP_004139649.1| CoA-binding protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166061|gb|ADV09599.1| CoA-binding domain protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 692

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 75/217 (34%), Gaps = 28/217 (12%)

Query: 5   EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           E +AK+ L K  +PV KG   ++   A  +   L  P+ +           K       +
Sbjct: 484 EAEAKSRLIKAGLPVPKGERAANAVEAVISSMALGFPVAL-----------KALGVTHKS 532

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
           +           +SV +   ++L           TG  V    V DG     EL +    
Sbjct: 533 EVGAVRLNLRDAESVSTAAHDLLPL--------GTGLYVER-MVRDGV---AELIVGFTR 580

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D   G V  + +  GG+ +E +       +     D    +    +  L +    + +A 
Sbjct: 581 DPMFGAVMTLGT--GGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD 638

Query: 185 IDGGDLFPNLYKAFCDKDMSLLE---INPLIIMKNGR 218
           +       +   AF  ++   +E   INPLI+   G+
Sbjct: 639 VAAAIDAISGIAAFVQQNAGEIEELDINPLIVCAEGK 675


>gi|254995248|ref|ZP_05277438.1| phosphoribosylamine--glycine ligase [Anaplasma marginale str.
           Mississippi]
          Length = 419

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +YN+P AK      + +A+  +K    P  VVK+   A G+              
Sbjct: 107 KELCARYNIPTAKHGYFMDIGSAKQFVKRSKLP-LVVKADGPAQGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +L+     +  +L    +  + G  G     V VE+  D  +E+    L+D T+
Sbjct: 152 GVIICHTLEETYDALDAML----VQGKFGKAG---EAVVVEEFLD-GKEVSFLTLIDGTN 203

Query: 129 GMVAFIASTQG 139
                + + Q 
Sbjct: 204 --PVVLGAVQD 212


>gi|254826123|ref|ZP_05231124.1| carbamoyl-phosphate synthase [Listeria monocytogenes FSL J1-194]
 gi|293595363|gb|EFG03124.1| carbamoyl-phosphate synthase [Listeria monocytogenes FSL J1-194]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|229818000|ref|ZP_04448282.1| hypothetical protein BIFANG_03287 [Bifidobacterium angulatum DSM
           20098]
 gi|229784604|gb|EEP20718.1| hypothetical protein BIFANG_03287 [Bifidobacterium angulatum DSM
           20098]
          Length = 431

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 28/163 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        ++    +    +  P  VVK  + + G G+             VR   +
Sbjct: 137 GLPTTPYRFAGTLEELRAGANEVGYPC-VVKPIMSSSGHGQS-----------IVRTPDA 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ +E         +       ++ V VE  A + RE  L++L   +S  +    
Sbjct: 185 IDAAWTEAQE--------GRRAHDEGDISRVIVEALAPLERE--LTVLTVSSSAGIVTCT 234

Query: 134 -IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            I   Q   D  E  + +        +DP     +     +  
Sbjct: 235 PIGQRQESGDYRESWQTHEPANQ---VDPGRADETARAQHIAK 274


>gi|254506382|ref|ZP_05118524.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus 16]
 gi|219550556|gb|EED27539.1| phosphoribosylamine--glycine ligase [Vibrio parahaemolyticus 16]
          Length = 429

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  +   E    ++VD  S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGKS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|198243025|ref|YP_002214484.1| membrane protein FdrA [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|197937541|gb|ACH74874.1| protein FdrA [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|326622232|gb|EGE28577.1| protein FdrA [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
          Length = 554

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 90/294 (30%), Gaps = 50/294 (17%)

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVAS-----LCDMLELQGQARID 186
             + +      +E     +         D  + + +E V       +   LE   Q    
Sbjct: 35  VMMGTPANKSLLETTGFWHDDFHGATPNDICVAIRTEAVDDGITQVIVQQLEEALQQLAQ 94

Query: 187 GGDLFPNLYKA--FCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD 244
           G     +L +   +      L E N  ++   G      +     D AL R L++    D
Sbjct: 95  GSSGSQSLIQVRRWESACQKLPEANLALVSVAGEYAAELA-----DQALDRSLNVMIFSD 149

Query: 245 ---VSEEDSREIEAKQHN-------------------LSYIALDGNIGCMVNGAGLAMAT 282
              + +E   +  A+                       + +  +GNIG +          
Sbjct: 150 NVTLDDEIRLKRRARDKGLLVMGPDCGTAMIANTPLAFANVMPEGNIGVIGASGTGIQEL 209

Query: 283 MDIIKLYGGAPANFL-----DVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDV 337
              I L G    + +     D+           A +I+++D   +   +  F      D 
Sbjct: 210 CSQIALAGEGITHAIGLGGRDLSAEVGGISALTALEILSADEKSQ---VLAFVSKPPADA 266

Query: 338 LVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKI 391
           + + I++A+K      P+V    G +  +          NV  A  LD+AA+  
Sbjct: 267 VRQHIIAAMKATG--KPVVALFLGFSSPVARE------ENVWFASTLDEAARLA 312


>gi|157961922|ref|YP_001501956.1| alpha-L-glutamate ligase [Shewanella pealeana ATCC 700345]
 gi|190360206|sp|A8H4D4|RIMK_SHEPA RecName: Full=Ribosomal protein S6 modification protein
 gi|157846922|gb|ABV87421.1| alpha-L-glutamate ligase, RimK family [Shewanella pealeana ATCC
           700345]
          Length = 458

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 15/189 (7%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKG-RFKELPADSKG 68
            LL+K N+ +      +S    +  I  + G   +VK  +  G +GKG    E    ++ 
Sbjct: 268 QLLQKNNLDIPTSGFANSPVDTKDLIDMVGGAPLIVK--LLEGTQGKGVVLAETTKAAES 325

Query: 69  GVRVESSLKS---VISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            +    SL+    V   I+E  G  L  +     G  V  +   +      E   ++   
Sbjct: 326 VINAFKSLRVNLLVQEFIKEAQGKDL--RCFVIDGKIVASI---ERTAAPGEFRANI--- 377

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
              G  + ++ +     +   A      +    +D +       +  +     L+G    
Sbjct: 378 HMGGSASIVSVSAAEKQLAIKAAKTMG-LRVAGVDIIRSSRGPLLLEINSSPGLEGIESA 436

Query: 186 DGGDLFPNL 194
            G D+   +
Sbjct: 437 TGIDIAGAM 445


>gi|332158577|ref|YP_004423856.1| phosphoribosylglycinamide formyltransferase 2 [Pyrococcus sp. NA2]
 gi|331034040|gb|AEC51852.1| phosphoribosylglycinamide formyltransferase 2 [Pyrococcus sp. NA2]
          Length = 429

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L+++  VP ++ +  +++     A + +  P +  K+ + + G+G   F   P D     
Sbjct: 125 LVKEAKVPTSRYMYATTLDELYEACEKIGYPCH-TKAIMSSSGKG-SYFVRGPEDIPKAW 182

Query: 71  RVESSLKSVISDIREIL 87
               +         +I+
Sbjct: 183 EEAKTK--ARGSAEKII 197


>gi|330981476|gb|EGH79579.1| Urea amidolyase-related protein [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 767

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 23/121 (19%)

Query: 8   AKALLRKYNVPVAKG-VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           A+AL R++ VP+ +G  ++ S+ +A +A  T+  P+                 K      
Sbjct: 119 ARALARQHGVPMLEGTELLDSLESAIAAAHTIGYPVM---------------LKSTAGGG 163

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             G+RV  S + +      +    L        G     V++E      R L + +  D 
Sbjct: 164 GIGMRVCRSAEELADSFEAV--KRLGQNNFSDAG-----VFIEKYIQRARHLEVQVFGDG 216

Query: 127 T 127
            
Sbjct: 217 Q 217


>gi|313637314|gb|EFS02805.1| carbamoyl-phosphate synthase, large subunit [Listeria seeligeri FSL
           S4-171]
          Length = 1064

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|194383984|dbj|BAG59350.1| unnamed protein product [Homo sapiens]
          Length = 702

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 31/215 (14%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           ++K L +K  V    G   V+     A    + +  P+ +  S                 
Sbjct: 153 ESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKAS---------------AG 197

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+R+    +          G  L +++   +    + + +E   D  R + + +L 
Sbjct: 198 GGGKGMRIAWDDEETRD------GFRLSSQEAASSFGD-DRLLIEKFIDNPRHIEIQVLG 250

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLELQGQA 183
           D+    +      +    I+   +   ++   + +D        E   +L   ++     
Sbjct: 251 DKHGNALWL---NERECSIQRRNQKVVEEAPSIFLDAETRRAMGEQAVALARAVKYSSAG 307

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG 217
            ++   D   N Y  F + +  L   +P+     G
Sbjct: 308 TVEFLVDSKKNFY--FLEMNTRLQVEHPVTECITG 340


>gi|56417075|ref|YP_154149.1| phosphoribosylamine--glycine ligase [Anaplasma marginale str. St.
           Maries]
 gi|56388307|gb|AAV86894.1| phosphoribosylamine-glycine ligase [Anaplasma marginale str. St.
           Maries]
          Length = 420

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 25/131 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +YN+P AK      + +A+  +K    P  VVK+   A G+              
Sbjct: 107 KELCARYNIPTAKHGYFMDIGSAKQFVKRSKLP-LVVKADGPAQGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  +L+     +  +L    +  + G  G     V VE+  D  +E+    L+D T+
Sbjct: 152 GVIICHTLEETYDALDAML----VQGKFGKAG---EAVVVEEFLD-GKEVSFLTLIDGTN 203

Query: 129 GMVAFIASTQG 139
                + + Q 
Sbjct: 204 --PVVLGAVQD 212


>gi|47093072|ref|ZP_00230850.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           str. 4b H7858]
 gi|47018573|gb|EAL09328.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           str. 4b H7858]
 gi|328466185|gb|EGF37342.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           1816]
 gi|328473557|gb|EGF44394.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           220]
 gi|332312276|gb|EGJ25371.1| Carbamoyl-phosphate synthase [Listeria monocytogenes str. Scott A]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|328542689|ref|YP_004302798.1| methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) [polymorphum
           gilvum SL003B-26A1]
 gi|326412435|gb|ADZ69498.1| putative Methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
           [Polymorphum gilvum SL003B-26A1]
          Length = 664

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESA--IKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +AK +  +  VP   G           A   + +  P+ + K+    GGRG  R  E P 
Sbjct: 127 EAKRIAVEAGVPTVPGYHGDDQDPVRLAAEAERIGYPVLI-KASAGGGGRGM-RLVERPQ 184

Query: 65  DSKGGVRVESS 75
           D    +    +
Sbjct: 185 DFAAALETART 195


>gi|307129004|ref|YP_003881020.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Dickeya dadantii 3937]
 gi|306526533|gb|ADM96463.1| phosphoribosylglycinamide synthetase phosphoribosylamine-glycine
           ligase [Dickeya dadantii 3937]
          Length = 429

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L + ++P A+    + +  A + I+    P+ V+K+   A G+              
Sbjct: 109 KDFLARQHIPTAEYQNFTEIEPALAYIRRKGAPI-VIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+   +   ++L         G  G     + VE+  D   E    ++VD   
Sbjct: 154 GVIVAMTLEEAENAATDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEH 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|262197301|ref|YP_003268510.1| hypothetical protein Hoch_4119 [Haliangium ochraceum DSM 14365]
 gi|262080648|gb|ACY16617.1| hypothetical protein Hoch_4119 [Haliangium ochraceum DSM 14365]
          Length = 492

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 60/202 (29%), Gaps = 38/202 (18%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           ++ K LL  Y +P+ +  V ++  AA    K    P+ V               K    D
Sbjct: 288 HETKVLLDCYGIPITRQAVATTPSAATRLAKKAGFPVEV---------------KPWGPD 332

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTG-PTGSRVNCVYVEDGADILRELYLSLLV 124
                      + + +        + +++  G P G+ V    V +   I RE    +  
Sbjct: 333 QLSERDGCPVQRDLQTAADVRRAMSAVSRAAGLPDGAPV---IVRETPPIGREASAQVTS 389

Query: 125 DRTSG-----------MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASL 173
               G                 +  G +DI E+                 G    D  +L
Sbjct: 390 MGPLGWMLILEIAGVPEPVAAPAPLGQVDIAEIMAHLQAS--------RAGDPEPDRDAL 441

Query: 174 CDMLELQGQARIDGGDLFPNLY 195
            D+L       +D  D+   LY
Sbjct: 442 ADILVRAAYLAVDNADVLEALY 463


>gi|289207884|ref|YP_003459950.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288943515|gb|ADC71214.1| carbamoyl-phosphate synthase, large subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 1077

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/159 (11%), Positives = 44/159 (27%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           KA +    +     ++  S   A+     +  P+ +         R              
Sbjct: 133 KAAMADIGLDTPTAMLAHSWEEAQEIQPKIGFPVII---------RPSFTLGGSGGG--- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  + +     ++  L  +            VN V +E+ A   +E  + ++ D+  
Sbjct: 181 ---IAYNREEFEYIVKNGLDLS-----------PVNQVLLEESALGWKEFEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE +          + + P   +T 
Sbjct: 227 NCIII-------CSIENLDPMGIHTGDSITVAPAQTLTD 258


>gi|224372221|ref|YP_002606593.1| carbamoyl phosphate synthase large subunit [Nautilia profundicola
           AmH]
 gi|223589941|gb|ACM93677.1| carbamoyl-phosphate synthase, large subunit [Nautilia profundicola
           AmH]
          Length = 1090

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + +  + +AK     ++  A    K +  PL V  +    G                
Sbjct: 131 KQAVERIGLDLAKSETAHTLDEAVEIAKNIGFPLIVRAAYTLGGL--------------- 175

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G  V  +++   +  +           TG   S +N + + +     +E  + ++ DR  
Sbjct: 176 GSGVAYNMEEFKALAK-----------TGIEASPINEIEILESMLGWKEYEMEVIRDRND 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE V          + + P + +T ++   + D 
Sbjct: 225 NCIIV-------CSIENVDPMGVHTGDSITVAPALTLTDKEYQKMRDA 265


>gi|118575330|ref|YP_875073.1| glutathione synthase/ribosomal protein S6 modification enzyme
           (glutaminyl transferase) [Cenarchaeum symbiosum A]
 gi|118193851|gb|ABK76769.1| glutathione synthase/ribosomal protein S6 modification enzyme
           (glutaminyl transferase) [Cenarchaeum symbiosum A]
          Length = 282

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           LLRK  V      V  S  AA  ++     P  V+K  + + GR   +  +
Sbjct: 96  LLRKKGVATPAATVAFSREAALESLDKGGYPR-VIKPTVGSWGRMIAKLND 145


>gi|31789381|gb|AAP58498.1| putative phosphoribosylamineglycine ligase [uncultured
           Acidobacteria bacterium]
          Length = 424

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIK--TLPGPLYVVKSQIHAGGRG 55
           AKA + ++ +P A+        AA + ++   L  P  VVK+   A G+G
Sbjct: 106 AKAFMARHGIPTARYRACEDAPAAHAVVESGELGFP-LVVKADGLAAGKG 154


>gi|68476762|ref|XP_717526.1| hypothetical protein CaO19.12528 [Candida albicans SC5314]
 gi|46439240|gb|EAK98560.1| hypothetical protein CaO19.12528 [Candida albicans SC5314]
          Length = 802

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A+    + V  A+  I+++   + V+K+   A G+             
Sbjct: 115 SKEFMDKHNIPTARFQNFTDVAKAKEHIQSIDYKI-VLKADGIAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV +  + +  +  + EI    ++ K  G  G   N + +E+  +      LS+L 
Sbjct: 161 -GVLIPETTEEALQGLNEI----MVDKNFGDAG---NEIVIEEFLEGDE---LSILT 206


>gi|237815337|ref|ZP_04594335.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella abortus str.
           2308 A]
 gi|237790174|gb|EEP64384.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella abortus str.
           2308 A]
          Length = 459

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 125 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 179

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 180 SAEELPIALATARSEAGAA 198


>gi|226361373|ref|YP_002779151.1| glycinamide ribonucleotide transformylase PurT [Rhodococcus opacus
           B4]
 gi|226239858|dbj|BAH50206.1| glycinamide ribonucleotide transformylase PurT [Rhodococcus opacus
           B4]
          Length = 403

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 28/105 (26%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P +      S+    +A   +  P  V+K  + + G+G+             VR    
Sbjct: 132 GLPTSPYEFAESLAEVRAATDRIGFPC-VIKPVMSSSGKGQST-----------VRGADD 179

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVN--CVYVEDGADILREL 118
           ++                      G RVN   V VE   D   E+
Sbjct: 180 VEKAWEYA--------------LAGGRVNHGRVIVEGFVDFDYEI 210


>gi|171318513|ref|ZP_02907665.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia ambifaria
           MEX-5]
 gi|171096299|gb|EDT41205.1| acetyl-CoA carboxylase, biotin carboxylase [Burkholderia ambifaria
           MEX-5]
          Length = 455

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 111/339 (32%), Gaps = 57/339 (16%)

Query: 8   AKALLRKYNVP-VA--KGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  + K  VP V   +G +           +T+  P+ +  +                 
Sbjct: 119 AKQTMIKTGVPCVPGSEGALPDDPKEIVKIARTIGYPVIIKAA------------GGGGG 166

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                V  E++L + ++  RE  G      Q          VY+E   +  R + + +L 
Sbjct: 167 RGMRVVHTEAALVNAVNMTREEAGRAFGNPQ----------VYMEKFLENPRHIEIQVLS 216

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D     +        G     + + + + I +    P  G+    +  + D       A 
Sbjct: 217 DAHKNAIWL------GERDCSMQRRHQKVIEEA---PAPGIPRRLIERIGDR---CADAC 264

Query: 185 IDGGDLFPNLYK-AFCDKDMSLLEIN-------PLIIMKNG-RLRVLDSKISFDDNALYR 235
              G L    ++  + + +   +E+N       P+  M  G  +     +I+  +    R
Sbjct: 265 KKMGYLGAGTFEFLYENNEFYFIEMNTRVQVEHPVSEMITGVDIVQEQIRIAAGEKIALR 324

Query: 236 HLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGG-APA 294
             DIQ  R  + E     E       +    G I    +  G     +D     G   P 
Sbjct: 325 QRDIQ-FRGHAIECRINAE---DPFRFTPSPGRI-TSWHTPGGPGVRVDSHAYNGYFVPP 379

Query: 295 NFLDVGG-----GADQDKVAAAFKIITSDSSVKGILINI 328
           N+  + G     GA +D+     +I  S+  V+GI  NI
Sbjct: 380 NYDSMIGKVITYGATRDQAIRRMRIALSEMVVEGIHTNI 418


>gi|46908067|ref|YP_014456.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|254852741|ref|ZP_05242089.1| carbamoyl-phosphate synthase [Listeria monocytogenes FSL R2-503]
 gi|300763852|ref|ZP_07073849.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           FSL N1-017]
 gi|67460315|sp|Q71YI1|CARB_LISMF RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|46881337|gb|AAT04633.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|258606065|gb|EEW18673.1| carbamoyl-phosphate synthase [Listeria monocytogenes FSL R2-503]
 gi|300515588|gb|EFK42638.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           FSL N1-017]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|15805695|ref|NP_294391.1| carbamoyl phosphate synthase large subunit [Deinococcus radiodurans
           R1]
 gi|22095540|sp|Q9RWK0|CARB_DEIRA RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|6458373|gb|AAF10248.1|AE001924_1 carbamoyl-phosphate synthase, large subunit [Deinococcus
           radiodurans R1]
          Length = 1024

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 37/172 (21%)

Query: 9   KALL----RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L     +K  V  A+G ++ S+  A    K +  P+ +         R          
Sbjct: 129 RELFQAAMKKIGVETARGKMVHSMEEAVEYQKEIGLPIVI---------RPSFTLGGTGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +  ++               G   S V  V +E+     +E  L ++ 
Sbjct: 180 G------IAHTYEEFLAITEG-----------GLRDSPVTSVLLEESILGWKEYELEVMR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           D  +  V  I S      IE            + + P   ++  +   L D 
Sbjct: 223 DT-ADTVIIITS------IENFDPMGVHTGDSITVAPAQTLSDVEYQRLRDQ 267


>gi|261250475|ref|ZP_05943050.1| phosphoribosylamine--glycine ligase [Vibrio orientalis CIP 102891]
 gi|260939044|gb|EEX95031.1| phosphoribosylamine--glycine ligase [Vibrio orientalis CIP 102891]
          Length = 429

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHKIPTGAYANFTEIEPALAYVRQQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  +   E    ++VD  S
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGEAG---SRVVIEEFLE-GEEASFIVMVDGQS 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|260777628|ref|ZP_05886521.1| protein acetyltransferase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605641|gb|EEX31926.1| protein acetyltransferase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 899

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L+ ++  V    + S    A    + +  P+ V         + +       +D +G + 
Sbjct: 502 LKHFDFNVLPTWIASDASEAVHVAEQIGYPVAV---------KLRSPDIAHKSDVQGVML 552

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLLVDRTSG 129
              + + V S  + IL  T ++  +      ++ + V+  A +    E+ + +  D T G
Sbjct: 553 NLRNSQEVASASQAILDRTKLSYPSAH----IHGLLVQGMAKLAGGEEIRIKVKTDETFG 608

Query: 130 MVAFIASTQGGMDIEE 145
            V  I   QGG + +E
Sbjct: 609 PVILIG--QGGSEWDE 622


>gi|197106049|ref|YP_002131426.1| carbamoyl-phosphate synthase, large subunit [Phenylobacterium
           zucineum HLK1]
 gi|196479469|gb|ACG78997.1| carbamoyl-phosphate synthase, large subunit [Phenylobacterium
           zucineum HLK1]
          Length = 1096

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 28/128 (21%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +   +  V  ++  A + ++ +  P  +  S   AG             + GG+    +
Sbjct: 140 GLESPRSQVAHTLEEAMAGLEQVGLPAIIRPSFTLAG-------------TGGGI--AYN 184

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135
           ++     +   L  +  T+           V +E+     +E  + ++ DR       I 
Sbjct: 185 VEEFKEIVERGLDLSPTTE-----------VLIEESVLGWKEYEMEVVRDRADN--CIIV 231

Query: 136 STQGGMDI 143
            +   +D 
Sbjct: 232 CSIENVDP 239


>gi|188585933|ref|YP_001917478.1| cell division protein FtsA [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350620|gb|ACB84890.1| cell division protein FtsA [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 407

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 330 GGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIG--------NRLIAESGLNVITA 381
           GGI+  D   + I++AV++ +       R+ G  ++           +LI  SG+  +++
Sbjct: 46  GGIVDLDKTTEAIVNAVEQAE-------RMAGVELESTFVGIIGSHIQLIENSGVVAVSS 98

Query: 382 ID---LDDAAQKIVHAVK 396
            D    ++  Q+ V A K
Sbjct: 99  DDKEITEEDVQRAVQAAK 116


>gi|168465632|ref|ZP_02699514.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195631725|gb|EDX50245.1| protein FdrA [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 554

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 86/268 (32%), Gaps = 51/268 (19%)

Query: 153 KIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKA--FCDKDMSLLEINP 210
            I    +D   G+T   V  L + L    Q    G     +L +   +      L E N 
Sbjct: 67  AIRTEAVD--DGITQVIVRQLEEAL----QQLAQGSSGSQSLIQVRRWESACQKLPEANL 120

Query: 211 LIIMKNGRLRVLDSKISFDDNALYRHLDIQELRD---VSEEDSREIEAKQHN-------- 259
            ++   G      +     + AL R L++    D   + +E   +  A+           
Sbjct: 121 ALVSVAGEYAAELA-----EQALDRSLNVMIFSDNVTLDDEIRLKRRARDKGLLVMGPDC 175

Query: 260 -----------LSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFL-----DVGGGA 303
                       + +  +GNIG +             I L G    + +     D+    
Sbjct: 176 GTAMIANTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSAEV 235

Query: 304 DQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGAN 363
                  A +I+++D   +   +  F      D + + I++A+K      P+V    G +
Sbjct: 236 GGISALTALEILSADEKSQ---VLAFVSKPPADAVRQHIIAAMKATG--KPVVALFLGFS 290

Query: 364 VDIGNRLIAESGLNVITAIDLDDAAQKI 391
             +          NV  A  LD+AA+  
Sbjct: 291 SPVARE------DNVWFASTLDEAARLA 312


>gi|118580013|ref|YP_901263.1| acyl-CoA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502723|gb|ABK99205.1| acetyl-CoA synthetase (ADP-forming) beta subunit / branched-chain
           acyl-CoA synthetase (ADP-forming) beta subunit
           [Pelobacter propionicus DSM 2379]
          Length = 223

 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 74/234 (31%), Gaps = 43/234 (18%)

Query: 4   HEYQAKALLRKYNVPVAKGVVISSVHAAESAI-KTLPGPLYVVKSQIHAGGRGKGRFKEL 62
            E++ K LLR   + V KG+ IS      S    + P    VV S+I             
Sbjct: 21  REHEVKELLRGLGLSVPKGMFISRGTKILSVAGLSFPLVAKVVSSRI------------A 68

Query: 63  PADSKGGVRV-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS 121
                GGVR+   +   +   + E+                   V VE+ A    E+ + 
Sbjct: 69  SKSDIGGVRLGIGNGDELQKAVSELSRM-----------EHAEGVLVEEMARPGFEVIVG 117

Query: 122 LLVDRTSGMVAFIASTQG-------GMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC 174
            +VD  S     +    G        +       D  Q I+         +       + 
Sbjct: 118 GIVD-NSFGPIVMFGPGGLFVELFRDVSFALAPVDRQQAIWL--------MKETKGEKIL 168

Query: 175 DML-ELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKIS 227
                           +   + +         +++NP+I+  +G L VLD+K+S
Sbjct: 169 KGFRGQPPLDVCALTHVIVMVSEVIASGQFRTIDLNPVILYPSGTL-VLDAKMS 221


>gi|330976779|gb|EGH76816.1| phosphoribosylamine--glycine ligase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 213

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  SL      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMSLAEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGKN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|300714864|ref|YP_003739667.1| phosphoribosylamine-glycine ligase [Erwinia billingiae Eb661]
 gi|299060700|emb|CAX57807.1| Phosphoribosylamine-glycine ligase [Erwinia billingiae Eb661]
          Length = 426

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A+    + V  A  A     G   V+K+   A G+              
Sbjct: 109 KDFLARHKIPSAEYQNFTEVEPA-LAYTRSKGAPIVIKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G     + VE+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLQEAEDAIQDMLA----GNAFGDAGH---RIVVEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|254706885|ref|ZP_05168713.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis M163/99/10]
 gi|254710007|ref|ZP_05171818.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis B2/94]
 gi|254716933|ref|ZP_05178744.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           M13/05/1]
 gi|256031502|ref|ZP_05445116.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis M292/94/1]
 gi|260168635|ref|ZP_05755446.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella sp.
           F5/99]
 gi|261218739|ref|ZP_05933020.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           M13/05/1]
 gi|261314350|ref|ZP_05953547.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis M163/99/10]
 gi|261317555|ref|ZP_05956752.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis B2/94]
 gi|261758108|ref|ZP_06001817.1| acetyl-CoA carboxylase [Brucella sp. F5/99]
 gi|265988589|ref|ZP_06101146.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis M292/94/1]
 gi|260923828|gb|EEX90396.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           M13/05/1]
 gi|261296778|gb|EEY00275.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis B2/94]
 gi|261303376|gb|EEY06873.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis M163/99/10]
 gi|261738092|gb|EEY26088.1| acetyl-CoA carboxylase [Brucella sp. F5/99]
 gi|264660786|gb|EEZ31047.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           pinnipedialis M292/94/1]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|241760250|ref|ZP_04758346.1| carbamoyl-phosphate synthase, large subunit [Neisseria flavescens
           SK114]
 gi|241319361|gb|EER55826.1| carbamoyl-phosphate synthase, large subunit [Neisseria flavescens
           SK114]
          Length = 1071

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|217964012|ref|YP_002349690.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           HCC23]
 gi|254813599|sp|B8DDR7|CARB_LISMH RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|217333282|gb|ACK39076.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           HCC23]
 gi|307571417|emb|CAR84596.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           L99]
 gi|313608127|gb|EFR84184.1| carbamoyl-phosphate synthase, large subunit [Listeria monocytogenes
           FSL F2-208]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|163843176|ref|YP_001627580.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           ATCC 23445]
 gi|163673899|gb|ABY38010.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella suis ATCC
           23445]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|296184871|ref|ZP_06853282.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           carboxidivorans P7]
 gi|296050653|gb|EFG90076.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           carboxidivorans P7]
          Length = 1062

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 12/106 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  L+K N+P   G  + S+  A  A++ L  P+ V  S +  GGR      E+  D KG
Sbjct: 671 RKFLQKLNIPSPTGTAVISIEEAYMAVEELQYPVVVRPSYV-IGGRAM----EVVYDKKG 725

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
             +  +    V +D   ++   +        G+ +    + DG DI
Sbjct: 726 LTKYMNEAVQVSTDHTILIDRYI-------KGTEIEVDAICDGEDI 764


>gi|256159627|ref|ZP_05457389.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           M490/95/1]
 gi|256254907|ref|ZP_05460443.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           B1/94]
 gi|261222089|ref|ZP_05936370.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           B1/94]
 gi|265998054|ref|ZP_06110611.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           M490/95/1]
 gi|260920673|gb|EEX87326.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           B1/94]
 gi|262552522|gb|EEZ08512.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ceti
           M490/95/1]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|254689155|ref|ZP_05152409.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 6 str. 870]
 gi|260754654|ref|ZP_05867002.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 6 str. 870]
 gi|260674762|gb|EEX61583.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 6 str. 870]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|268680524|ref|YP_003304955.1| phosphoribosylglycinamide formyltransferase 2 [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268618555|gb|ACZ12920.1| phosphoribosylglycinamide formyltransferase 2 [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 386

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 11/92 (11%)

Query: 2   NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE 61
           NI E+ A+ L     +  +  V + ++   + A K L  P  VVK  + + G G+   + 
Sbjct: 115 NIREFAAEKL----GLKTSGYVFVKTLEELQEATKKLGIPC-VVKPVMSSSGHGQSVIRS 169

Query: 62  LPADSKGGVRVESSL-KSVISDIREILGSTLI 92
                +  ++    + K    D  E++    +
Sbjct: 170 -----EADIQKSWEIAKEARGDASELIVEEFV 196


>gi|227890524|ref|ZP_04008329.1| biotin carboxylase [Lactobacillus salivarius ATCC 11741]
 gi|227867462|gb|EEJ74883.1| biotin carboxylase [Lactobacillus salivarius ATCC 11741]
          Length = 459

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLY 43
           A+  ++K  VPV  G    I +V  A+     +  P+ 
Sbjct: 119 AREQMQKSGVPVIPGSEGFIETVEEAKEVANKVGYPVL 156


>gi|225627395|ref|ZP_03785432.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella ceti str.
           Cudo]
 gi|225617400|gb|EEH14445.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella ceti str.
           Cudo]
          Length = 459

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 125 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 179

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 180 SAEELPIALATARSEAGAA 198


>gi|225024768|ref|ZP_03713960.1| hypothetical protein EIKCOROL_01655 [Eikenella corrodens ATCC
           23834]
 gi|224942475|gb|EEG23684.1| hypothetical protein EIKCOROL_01655 [Eikenella corrodens ATCC
           23834]
          Length = 1069

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|253698797|ref|YP_003019986.1| phosphoribosylglycinamide formyltransferase 2 [Geobacter sp. M21]
 gi|251773647|gb|ACT16228.1| phosphoribosylglycinamide formyltransferase 2 [Geobacter sp. M21]
          Length = 392

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 29/139 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P A     +S      A+  +  P  VVK  + + G+G+   ++              
Sbjct: 124 GLPTAAYRFATSTEEFREAVAAIGLPC-VVKPIMSSSGKGQSVLRD-------------- 168

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
                    E      I    G +    N V VE       E  ++LL  R  G  +F  
Sbjct: 169 -----EADMERCFKYAIEGARGAS----NKVIVEQFIPFDYE--ITLLTVRHVGGTSFCP 217

Query: 134 -IASTQGGMDIEEVAKDYP 151
            I   Q   D  E  +  P
Sbjct: 218 PIGHRQIDGDYHESWQPTP 236


>gi|23501792|ref|NP_697919.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           1330]
 gi|62289849|ref|YP_221642.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 1 str. 9-941]
 gi|82699775|ref|YP_414349.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           melitensis biovar Abortus 2308]
 gi|148560130|ref|YP_001258883.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella ovis
           ATCC 25840]
 gi|161618864|ref|YP_001592751.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella canis
           ATCC 23365]
 gi|189024091|ref|YP_001934859.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           S19]
 gi|254693638|ref|ZP_05155466.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 3 str. Tulya]
 gi|254697290|ref|ZP_05159118.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254701670|ref|ZP_05163498.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           bv. 5 str. 513]
 gi|254704213|ref|ZP_05166041.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           bv. 3 str. 686]
 gi|254719009|ref|ZP_05180820.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella sp.
           83/13]
 gi|254730188|ref|ZP_05188766.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 4 str. 292]
 gi|256061011|ref|ZP_05451168.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           neotomae 5K33]
 gi|256257405|ref|ZP_05462941.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 9 str. C68]
 gi|256369334|ref|YP_003106842.1| acetyl-CoA carboxylase [Brucella microti CCM 4915]
 gi|260545404|ref|ZP_05821145.1| acetyl-CoA carboxylase [Brucella abortus NCTC 8038]
 gi|260566539|ref|ZP_05837009.1| acetyl-CoA carboxylase [Brucella suis bv. 4 str. 40]
 gi|260757877|ref|ZP_05870225.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 4 str. 292]
 gi|260761700|ref|ZP_05874043.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883680|ref|ZP_05895294.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 9 str. C68]
 gi|261213904|ref|ZP_05928185.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 3 str. Tulya]
 gi|261325011|ref|ZP_05964208.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           neotomae 5K33]
 gi|261752222|ref|ZP_05995931.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           bv. 5 str. 513]
 gi|261754881|ref|ZP_05998590.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           bv. 3 str. 686]
 gi|265983999|ref|ZP_06096734.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella sp.
           83/13]
 gi|297248254|ref|ZP_06931972.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella abortus bv. 5
           str. B3196]
 gi|306840104|ref|ZP_07472890.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella sp. NF 2653]
 gi|306843804|ref|ZP_07476402.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella sp. BO1]
 gi|23347723|gb|AAN29834.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella suis 1330]
 gi|62195981|gb|AAX74281.1| AccC, acetyl-CoA carboxylase, biotin carboxylase [Brucella abortus
           bv. 1 str. 9-941]
 gi|82615876|emb|CAJ10880.1| Acetyl-CoA carboxylase, biotin carboxylase:Carbamoyl-phosphate
           synthase L chain, ATP-binding:Carbamoyl-phosphate
           synthetase l [Brucella melitensis biovar Abortus 2308]
 gi|148371387|gb|ABQ61366.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella ovis ATCC
           25840]
 gi|161335675|gb|ABX61980.1| Acetyl-CoA carboxylase [Brucella canis ATCC 23365]
 gi|189019663|gb|ACD72385.1| acetyl-CoA carboxylase [Brucella abortus S19]
 gi|255999494|gb|ACU47893.1| acetyl-CoA carboxylase [Brucella microti CCM 4915]
 gi|260096811|gb|EEW80686.1| acetyl-CoA carboxylase [Brucella abortus NCTC 8038]
 gi|260156057|gb|EEW91137.1| acetyl-CoA carboxylase [Brucella suis bv. 4 str. 40]
 gi|260668195|gb|EEX55135.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 4 str. 292]
 gi|260672132|gb|EEX58953.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260873208|gb|EEX80277.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 9 str. C68]
 gi|260915511|gb|EEX82372.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella abortus
           bv. 3 str. Tulya]
 gi|261300991|gb|EEY04488.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella
           neotomae 5K33]
 gi|261741975|gb|EEY29901.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           bv. 5 str. 513]
 gi|261744634|gb|EEY32560.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella suis
           bv. 3 str. 686]
 gi|264662591|gb|EEZ32852.1| acetyl-CoA carboxylase biotin carboxylase subunit [Brucella sp.
           83/13]
 gi|297175423|gb|EFH34770.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella abortus bv. 5
           str. B3196]
 gi|306275882|gb|EFM57598.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella sp. BO1]
 gi|306404832|gb|EFM61125.1| acetyl-CoA carboxylase, biotin carboxylase [Brucella sp. NF 2653]
          Length = 452

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 7   QAKALLRKYNVPV---AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELP 63
           +AK   ++  +PV   + G V   V AA    K +  P+ ++K+    GGRG    K   
Sbjct: 118 EAKRTAKRLGIPVVPGSDGGVTDEVEAAR-IAKEIGYPV-IIKASAGGGGRGM---KVAR 172

Query: 64  ADSKGGVRVESSLKSVISD 82
           +  +  + + ++     + 
Sbjct: 173 SAEELPIALATARSEAGAA 191


>gi|329725353|gb|EGG61836.1| putative acetyl-CoA carboxylase, biotin carboxylase subunit
           [Staphylococcus epidermidis VCU144]
          Length = 453

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 24/124 (19%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+  +++  VPV  G    + SV   +   K +  P+ V+K+                  
Sbjct: 119 ARQTVKQAGVPVIPGSNDAVQSVDEIKLLAKEIGFPV-VLKA-----------ASGGGGK 166

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               V+  S L   + + +                     VYVE    + + + + ++ D
Sbjct: 167 GIRIVKEASQLDQALKEAKSEGQKYFNDD----------RVYVEAFIPVAKHVEVQIIGD 216

Query: 126 RTSG 129
             + 
Sbjct: 217 GKNN 220


>gi|326390911|ref|ZP_08212462.1| phosphoribosylamine/glycine ligase [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325993059|gb|EGD51500.1| phosphoribosylamine/glycine ligase [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 419

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 23/127 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL KYN+P  +         A   +K    P+ V+K+   A G+              
Sbjct: 107 KQLLSKYNIPTGRFKAFDKYQEALKFLKETWYPV-VMKADGLAQGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +          +  ++   +     G +G  V    +E+     +E  +    D  +
Sbjct: 152 GVFIVKDFIEAKEALDLMMKKRIF----GASGDIV---IIEEML-FGKEASVFAFTDGEN 203

Query: 129 GMVAFIA 135
            +    A
Sbjct: 204 ILPMVSA 210


>gi|325266826|ref|ZP_08133497.1| carbamoyl-phosphate synthase, large subunit [Kingella denitrificans
           ATCC 33394]
 gi|324981567|gb|EGC17208.1| carbamoyl-phosphate synthase, large subunit [Kingella denitrificans
           ATCC 33394]
          Length = 1071

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|323478033|gb|ADX83271.1| lysine biosynthesis enzyme LysX [Sulfolobus islandicus HVE10/4]
          Length = 283

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKEL 62
           +L K+N+P  K  +      A    K L  P+ V+K    + GR   +   L
Sbjct: 95  ILAKHNIPTPKTFIAFDKTNAMEYSKKLGHPV-VIKPVEGSWGRMVAKADNL 145


>gi|317493382|ref|ZP_07951804.1| acetyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918775|gb|EFV40112.1| acetyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 891

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 73/223 (32%), Gaps = 25/223 (11%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   +++L  Y +      + +    A    + +  P+ +         + +    
Sbjct: 481 LDTHE--VRSILSHYGLHTLPTWIANDSTEAVHIAEQVGYPVAL---------KLRSPDI 529

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              +D +G +    +   V      I+      K   P  +R++ + V+  A+      L
Sbjct: 530 PHKSDVQGVMLYLRNASEVEQAANAIIDRV---KHAYPQ-ARIHGLLVQSMANRAGSQEL 585

Query: 121 SLLVDR-TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG----VTSEDVASLCD 175
            +LVD         +    GG        D+   +    ++  +     + +     +  
Sbjct: 586 RILVDNDPVFGPLIMLGEGGG----TWDPDHDAAVALPPLNMTLARYLIMQAIKGGKIRG 641

Query: 176 MLELQGQARIDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNG 217
              LQ         L   +     D  +++ L+I+P++   + 
Sbjct: 642 RSPLQPLNIDGLSQLLVQVSDLIVDCPEITRLDIHPVLASADD 684


>gi|300311536|ref|YP_003775628.1| phosphoribosylglycinamide formyltransferase 2 protein
           [Herbaspirillum seropedicae SmR1]
 gi|300074321|gb|ADJ63720.1| phosphoribosylglycinamide formyltransferase 2 protein
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 32/163 (19%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  +      S+   ++AI  +  P  V+K  + + G+G+ +                 
Sbjct: 130 GLATSPYRFADSLEELKAAIDQIGYPC-VIKPVMSSSGKGQSKIDG-------------- 174

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVN--CVYVEDGADILRELYLSLLVDRTSGMVAF 133
              + S                  G RV+   V VE   D   E+ L L V   +     
Sbjct: 175 PDEIESA-----------WNYAAAGGRVDAGRVIVEGFIDFDYEITL-LTVRSLNENGDT 222

Query: 134 IASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           + S    +   +V  DY +        P+ G   E    +   
Sbjct: 223 VTSFCDPIGHVQVKGDYVESWQP---HPMPGAALEKARDIARK 262


>gi|297243295|ref|ZP_06927229.1| D-alanine-D-alanine ligase (ATP-grasp enzyme) [Gardnerella
           vaginalis AMD]
 gi|296888702|gb|EFH27440.1| D-alanine-D-alanine ligase (ATP-grasp enzyme) [Gardnerella
           vaginalis AMD]
          Length = 380

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 25/217 (11%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE-LPA 64
           Y AK L +   + VA G+ + +   A  +          + +Q+ A       F +   A
Sbjct: 147 YYAKQLFKAAGIDVAPGIALDARKFASDSTNRFAAYANEMLAQVEAAKLEYPLFVKPSRA 206

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S  GV    S     +  + +  ++               V VE G +  RE+  ++L 
Sbjct: 207 GSSFGVTKVES-HDAKALAQAVFEASKHDW----------RVLVEQGIN-AREIECAVLA 254

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
            R           +  +D  +  +           D      S+ + S    +E+     
Sbjct: 255 ARDGEEPKVSLPGEIVLDKRQAGE-----------DQFYDFDSKYMDSAASHVEVPADLP 303

Query: 185 IDGGDLFPNLY-KAFCDKDMSLLEINPLIIMKNGRLR 220
            +  +L       AF   D   L      +   G + 
Sbjct: 304 AETLELVRKTALAAFKAADGRGLSRVDSFVTPEGHVM 340


>gi|293596891|ref|ZP_05265354.2| carbamoyl-phosphate synthase [Listeria monocytogenes HPB2262]
 gi|293583546|gb|EFF95578.1| carbamoyl-phosphate synthase [Listeria monocytogenes HPB2262]
          Length = 411

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 141 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 187


>gi|290893036|ref|ZP_06556025.1| carbamoyl-phosphate synthase [Listeria monocytogenes FSL J2-071]
 gi|290557396|gb|EFD90921.1| carbamoyl-phosphate synthase [Listeria monocytogenes FSL J2-071]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|239981820|ref|ZP_04704344.1| phosphoribosylaminoimidazole carboxylase ATPase subunit
           [Streptomyces albus J1074]
          Length = 363

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 65/265 (24%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +   P  +  +++      +  +   G   V+K+ +  G  GK            GV 
Sbjct: 94  LTEIGAPCPRHRIVADPADVAAFAEEGDGFPVVLKT-VRGGYDGK------------GVW 140

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL--VDRTSG 129
           V  S        R               G  V     E+     REL  +++      + 
Sbjct: 141 VVRSEADAAEPFR--------------AGVPV---LAEEMVPFRRELAANIVRSPHGQAV 183

Query: 130 MVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS-------EDVASLCDMLELQGQ 182
               + S Q               +   +I P  G++        E    + D L + G 
Sbjct: 184 AYPVVESRQVDG------------VCDTVIAPAPGLSEELSGQAQELALRIADELGVVGH 231

Query: 183 ARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMK--NGRLRVLDSKISFDDNALYRHLDIQ 240
             ++           F  +D  +L +N L +    +G   +  +  S   N +   LD+ 
Sbjct: 232 LAVE----------LFETEDGRVL-VNELAMRPHNSGHWTMDGAVTSQFANHVRAVLDLP 280

Query: 241 ELRDVSEEDSREIEAKQHNLSYIAL 265
            L D        +        Y  +
Sbjct: 281 -LGDPRPRAPWTVMCNVLGGDYPDM 304


>gi|238878782|gb|EEQ42420.1| phosphoribosylformylglycinamidine cyclo-ligase [Candida albicans
           WO-1]
          Length = 802

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A+    + V  A+  I+++   + V+K+   A G+             
Sbjct: 115 SKEFMDKHNIPTARFQNFTDVAKAKEHIQSIDYKI-VLKADGIAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV +  + +  +  + EI    ++ K  G  G   N + +E+  +      LS+L 
Sbjct: 161 -GVLIPETTEEALQGLNEI----MVDKNFGDAG---NEIVIEEFLEGDE---LSILT 206


>gi|291456309|ref|ZP_06595699.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           breve DSM 20213]
 gi|291381586|gb|EFE89104.1| phosphoribosylglycinamide formyltransferase 2 [Bifidobacterium
           breve DSM 20213]
          Length = 433

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +P        S+    +    +  P  VVK  + + G G+             VR   +
Sbjct: 146 GLPTTPYRFAGSLEELRAGALEVGYPC-VVKPLMSSSGHGQSV-----------VRSADA 193

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           + +  ++ ++         +       V+ V VE  A + RE  L++L   +S  +    
Sbjct: 194 IDAAWTEAQK--------GRRAADEGDVSRVIVEALAPLERE--LTVLTVSSSAGIVTCA 243

Query: 134 -IASTQGGMDIEEVAKDYPQ 152
            I   Q   D  E  +   +
Sbjct: 244 PIGQRQESGDYRESWQPAAE 263


>gi|261365571|ref|ZP_05978454.1| carbamoyl-phosphate synthase, large subunit [Neisseria mucosa ATCC
           25996]
 gi|288565894|gb|EFC87454.1| carbamoyl-phosphate synthase, large subunit [Neisseria mucosa ATCC
           25996]
          Length = 1071

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   K  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|212704195|ref|ZP_03312323.1| hypothetical protein DESPIG_02250 [Desulfovibrio piger ATCC 29098]
 gi|212672399|gb|EEB32882.1| hypothetical protein DESPIG_02250 [Desulfovibrio piger ATCC 29098]
          Length = 479

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 9   KALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           K L R  +VP   G    I     AE   ++      V + Q+  G +      +  A  
Sbjct: 131 KRLARSLDVPTVPGSDRPIYDEMEAERIARS------VFEFQVQQGIKRPLVLVKASAGG 184

Query: 67  KG-GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
            G G+     + +  S  R I    L  +Q    G     V +E        L + ++ D
Sbjct: 185 GGMGIEEVYDIDNFRSVYRRIRNYAL--RQFKDEG-----VLIEQRITDFNHLEVQIVSD 237

Query: 126 RTSGMVA 132
           R+     
Sbjct: 238 RSGKNPV 244


>gi|229816276|ref|ZP_04446585.1| hypothetical protein COLINT_03328 [Collinsella intestinalis DSM
           13280]
 gi|229808127|gb|EEP43920.1| hypothetical protein COLINT_03328 [Collinsella intestinalis DSM
           13280]
          Length = 1094

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 41/134 (30%), Gaps = 31/134 (23%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L  +      + VA+     SV  A + ++    P                  +    
Sbjct: 129 RKLFNEAMAELGLEVARSGYAYSVEDALAIVERTGYPCV---------------LRPSFT 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G  +      +I  + + L       +  P G     V VE+  +  +E  + ++ 
Sbjct: 174 MGGAGGGIAHDEAELIQIVTQGL-------ELSPAGE----VLVEESIEGWKEYEMEVMR 222

Query: 125 DRTSGMVAFIASTQ 138
           DR    +  + S +
Sbjct: 223 DRAGNGI-IVCSIE 235


>gi|315231798|ref|YP_004072234.1| Phosphoribosylglycinamide formyltransferase 2 [Thermococcus
           barophilus MP]
 gi|315184826|gb|ADT85011.1| Phosphoribosylglycinamide formyltransferase 2 [Thermococcus
           barophilus MP]
          Length = 429

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 8/89 (8%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L ++  VP ++    +++     A + +  P +  K+ + + G+G   F + P D     
Sbjct: 125 LAKEAKVPTSRYRYATTLDELYDACEKIGYPCH-TKAIMSSSGKG-SYFVKGPED----- 177

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPT 99
            V  + +      R      ++ +     
Sbjct: 178 -VPKAWEEAKKKARGSADKIIVEEHIDFE 205


>gi|118444451|ref|YP_878491.1| phosphoribosylformylglycinamidine synthase [Clostridium novyi NT]
 gi|118134907|gb|ABK61951.1| phosphoribosylformylglycinamidine synthase [Clostridium novyi NT]
          Length = 1664

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 22/116 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++KY V  A+  V   + +A   ++T   P  V+K+   A G+             
Sbjct: 106 SKEFMKKYGVKTAQYEVFEDIKSATEYLETCNYPT-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
            GV +  +       + + +   +        G     V +E+  + +    LS+ 
Sbjct: 152 -GVVICKTRDEAKKALEDFMLHDIFKG----AGL---KVVIEEFLEGVEASILSVT 199


>gi|114705589|ref|ZP_01438492.1| phosphoribosylamine-glycine ligase protein [Fulvimarina pelagi
           HTCC2506]
 gi|114538435|gb|EAU41556.1| phosphoribosylamine-glycine ligase protein [Fulvimarina pelagi
           HTCC2506]
          Length = 425

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 67/224 (29%), Gaps = 31/224 (13%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L   +++P A+    ++   A +AI+   GP+ VVK+   A G+              
Sbjct: 109 KDLCSLHDIPTARYKRFNNAPDARAAIEDRAGPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV +  S    ++ I             G  G     + +E+  +        +      
Sbjct: 154 GVTIAESRAEAVAAIDACF--------EGEFGGVGAELVIEEYLEGEEASLFCICDGT-- 203

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ--ARID 186
                  + Q    + +  +  P         P IG++   V  +   +           
Sbjct: 204 -RAVLFGTAQDHKRVFDGDRG-PNTGGMGAYSPAIGMSEAQVDRVMREIVEPTMRGMAEA 261

Query: 187 GGDLFPNLYK--AFCDKDMSLLEINPLIIMKNGRLRVLDSKISF 228
           G      LY      D    L+E N        ++ ++  K   
Sbjct: 262 GAPFKGVLYAGLMLTDTGPKLIEYNVRFGDPECQVLMMRLKSDL 305


>gi|146302932|ref|YP_001190248.1| carbamoyl-phosphate synthase L chain, ATP-binding [Metallosphaera
           sedula DSM 5348]
 gi|27462759|gb|AAO15572.1|AF461116_1 biotin carboxylase [Metallosphaera sedula]
 gi|145701182|gb|ABP94324.1| biotin carboxylase [Metallosphaera sedula DSM 5348]
          Length = 510

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 66/207 (31%), Gaps = 37/207 (17%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
             K + +   VP+A G    + S+  A    + +  P+ V  +                 
Sbjct: 120 DGKRIAQLSGVPIAPGSDGPVESIDEALKLAEKIGYPIMVKAA---------------SG 164

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+    +   +I          L T+  G +      +Y+E  A   R +   L+ 
Sbjct: 165 GGGVGITKIDTPDQLIDAWER--NKRLATQAFGRSD-----LYIEKAAVNPRHIEFQLIG 217

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQAR 184
           D+    V          + E   +   QK+ +    P   +T E+ + + + +   G+  
Sbjct: 218 DKYGNYVV-------AWERECTIQRRNQKLIEEAPSPA--ITMEERSRMFEPIYKYGKLI 268

Query: 185 IDGGDLFPNLYKAFCD--KDMSLLEIN 209
                        F D  ++   LE+N
Sbjct: 269 NYFT--LGTFETVFSDATREFYFLELN 293


>gi|313623243|gb|EFR93491.1| carbamoyl-phosphate synthase, large subunit [Listeria innocua FSL
           J1-023]
          Length = 1070

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|253576313|ref|ZP_04853643.1| acetyl-CoA carboxylase, biotin carboxylase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844206|gb|EES72224.1| acetyl-CoA carboxylase, biotin carboxylase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 447

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
            AK  +++ NVPV  G   +I  +  A    + +  P+      I A   G G+   +  
Sbjct: 119 MAKQTMKEANVPVIPGSDGLIEDLEEAVMVARDIGYPVI-----IKATAGGGGKGIRIAE 173

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTG-SRVNCVYVEDGADILRELYLS 121
           D +  ++  ++      + ++  G+  +  +   TG   V    + D       +YL 
Sbjct: 174 DEESLIKQITT---AQQEAQKAFGNAGVYLEKYLTGMKHVEIQIIADK--HGNAVYLG 226


>gi|138895110|ref|YP_001125563.1| acetyl-CoA carboxylase biotin carboxylase subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248308|ref|ZP_03147009.1| Carbamoyl-phosphate synthase L chain ATP-binding [Geobacillus sp.
           G11MC16]
 gi|134266623|gb|ABO66818.1| Acetyl-CoA carboxylase [Geobacillus thermodenitrificans NG80-2]
 gi|196212033|gb|EDY06791.1| Carbamoyl-phosphate synthase L chain ATP-binding [Geobacillus sp.
           G11MC16]
          Length = 450

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 97/333 (29%), Gaps = 43/333 (12%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           +A+  + K  VP+  GV   + S   A +A  ++  P+                 K    
Sbjct: 118 EARQTMEKAGVPIVPGVSFALDSPDEAAAAAASIGYPVM---------------LKASSG 162

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
               G+ +      +        GS          G     +Y+E   +  R + + LL 
Sbjct: 163 GGGIGMHIAHDEAELRQAFE---GSQKRAASFFGDG----TMYIEKYIERPRHIEIQLLA 215

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV-TSEDVASLCDMLELQGQA 183
           D     V      +    I+   +   ++     +D        E        +      
Sbjct: 216 DGHGNCVYLW---ERECSIQRRHQKVVEEAPSPFLDEETRRKMGEAAVQAARYIGYANAG 272

Query: 184 RIDG-GDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQE 241
            I+   D   N Y  F + +  L   +P+     G  +     +I+  +   Y+  DI  
Sbjct: 273 TIEFLVDEQKNFY--FLEMNTRLQVEHPVTEEITGIDIVEEQLRIAAGEPLRYKQEDI-- 328

Query: 242 LRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLD--- 298
            R         I A+  N  Y +  G I       G      +     G     F D   
Sbjct: 329 -RRDGHAIEVRIYAEDPNTFYPS-PGRIAAFSVPQGEG-IRHETAVQSGITVTPFYDPMI 385

Query: 299 ---VGGGADQDKVAAAFKIITSDSSVKGILINI 328
              +  G+D+            D  V+GI  NI
Sbjct: 386 AKMIAKGSDRTSAIERLLEALRDYHVEGIKTNI 418


>gi|108798482|ref|YP_638679.1| CoA-binding protein [Mycobacterium sp. MCS]
 gi|119867583|ref|YP_937535.1| CoA-binding domain-containing protein [Mycobacterium sp. KMS]
 gi|108768901|gb|ABG07623.1| CoA-binding protein [Mycobacterium sp. MCS]
 gi|119693672|gb|ABL90745.1| CoA-binding domain protein [Mycobacterium sp. KMS]
          Length = 703

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 70/221 (31%), Gaps = 27/221 (12%)

Query: 7   QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADS 66
           +  ALL ++ +P A  +V+        A  +  GP  V  + +                 
Sbjct: 499 EVMALLERFGIPTAPHLVLGDGDDV--ASPSFAGPYAVKLADV------------AHRTE 544

Query: 67  KGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
            G V +  +   + S + ++       +           V V+       EL + +   R
Sbjct: 545 LGAVALNVAPSELPSAVAQM-------RDIAAAHGVAPTVAVQPMTVSRGELLIGI-DGR 596

Query: 127 TSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE-DVASLCDMLELQGQARI 185
           +      +    GG+ +E + +   +       D    +    DV  L      +     
Sbjct: 597 SELGPMVMLGL-GGVFVEVLQRIGGRPAPLTRADAESLIEEFRDVHLLHGFRGSEPWHLD 655

Query: 186 DGGDLFPNLYKAFCDKD--MSLLEINPLIIMKNGRLRVLDS 224
              D      +        +  L++NPL++  +G L  +D+
Sbjct: 656 QLADTLVGFGQLAAAGHEWIESLDVNPLLVTADG-LVAVDA 695


>gi|57640142|ref|YP_182620.1| phosphoribosylglycinamide formyltransferase 2 [Thermococcus
           kodakarensis KOD1]
 gi|74503961|sp|Q5JFN8|PURT_PYRKO RecName: Full=Phosphoribosylglycinamide formyltransferase 2;
           Short=GART 2; AltName: Full=5'-phosphoribosylglycinamide
           transformylase 2; AltName: Full=Formate-dependent GAR
           transformylase; AltName: Full=GAR transformylase 2
 gi|57158466|dbj|BAD84396.1| formate-dependent phosphoribosylglycinamide formyltransferase
           [Thermococcus kodakarensis KOD1]
          Length = 429

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 24/108 (22%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           L R+  VP ++    S++     A + +  P +  K+ + + G+G   F + P D     
Sbjct: 125 LAREAKVPTSRYTYASTLDELYEACEKIGYPCH-TKAIMSSSGKG-SYFVKGPED----- 177

Query: 71  RVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILREL 118
            V  + +      R                     + VE+  D   E+
Sbjct: 178 -VPKAWEEAKKKAR----------------GSAEKLIVEEHIDFDVEI 208


>gi|84497651|ref|ZP_00996473.1| putative phosphoribosylglycinamide synthetase [Janibacter sp.
           HTCC2649]
 gi|84382539|gb|EAP98421.1| putative phosphoribosylglycinamide synthetase [Janibacter sp.
           HTCC2649]
          Length = 426

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 17/107 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++   +VP     V +++     A+  L  P +V+K    A G+             
Sbjct: 107 AKDVMSAADVPTGLAHVCTTIEQVADAMDALGAP-HVIKEDGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGST--LITKQTGPTGSRVNCVYVEDGA 112
            GV V  +  + ++     L      +  +    G  V+   + DG 
Sbjct: 153 -GVVVTENRDAALAHAEACLAKEGGSVVVEEFLDGPEVSLFVLSDGV 198


>gi|291484104|dbj|BAI85179.1| carbamoyl phosphate synthase large subunit [Bacillus subtilis
           subsp. natto BEST195]
          Length = 1071

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  VP   G   +SV  A S    +  P+ V  S +  G
Sbjct: 674 LGELGVPQPLGKTATSVDQAVSIASDIGYPVLVRPSYVLGG 714


>gi|294669529|ref|ZP_06734596.1| hypothetical protein NEIELOOT_01428 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308442|gb|EFE49685.1| hypothetical protein NEIELOOT_01428 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 1071

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 45/159 (28%), Gaps = 33/159 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  +   +  V  +++ A +A + +  P  +             R       S G
Sbjct: 133 KEAMEKIGLSCPRSFVCHTMNEALAAQEQVGFPTLI-------------RPSFTMGGSGG 179

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G+    +    ++               G   S  + + +E      +E  + ++ D+  
Sbjct: 180 GI--AYNKDEFLAICER-----------GFDASPTHELLIEQSVLGWKEYEMEVVRDKAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTS 167
             +           IE            + + P   +T 
Sbjct: 227 NCIII-------CSIENFDPMGVHTGDSITVAPAQTLTD 258


>gi|239815122|ref|YP_002944032.1| acetyl-CoA carboxylase, biotin carboxylase [Variovorax paradoxus
           S110]
 gi|239801699|gb|ACS18766.1| acetyl-CoA carboxylase, biotin carboxylase [Variovorax paradoxus
           S110]
          Length = 682

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L  +  V    G    I +   A    K +  P+ +  S                  
Sbjct: 119 SKKLANEAKVNTIPGWNDAIETAERAVEIAKDIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+RV  + K             L +          + V++E   +  R + + +L D
Sbjct: 164 GGKGLRVAYNDKEAFEGFTSCRNEALSSFGD-------DRVFIEKFVEEPRHIEIQVLGD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI-DPLIGVTSEDVASLCDMLELQGQAR 184
                   I   +    I+   +   ++     I D       E    L   ++ Q    
Sbjct: 217 SHGN---VIYLNERECSIQRRHQKVIEEAPSPFISDATRRAMGEQAVQLAKAVKYQSAGT 273

Query: 185 IDGGDLFPNLYKAFCDKDMSLLEIN 209
           ++             D+    LE+N
Sbjct: 274 VEFV--------VGKDQSFYFLEMN 290


>gi|16801015|ref|NP_471283.1| carbamoyl phosphate synthase large subunit [Listeria innocua
           Clip11262]
 gi|22095516|sp|Q92AH3|CARB_LISIN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|16414450|emb|CAC97179.1| pyrAB [Listeria innocua Clip11262]
          Length = 1070

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|327394938|dbj|BAK12360.1| acetyl-CoA synthetase YfiQ [Pantoea ananatis AJ13355]
          Length = 895

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 54/144 (37%), Gaps = 15/144 (10%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE Q   +L+ Y +      +      A +  +    P+ +         + +    
Sbjct: 485 LDTHEVQ--PVLKAYGLATLPTWIAKDSEDAVTIAEQTGYPVAL---------KLRSPDV 533

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYL 120
              ++ +G +    +   V      I+      +QT P  +R+  + V+  A+      L
Sbjct: 534 AHKSEVQGVMLYLRNAAEVKRAADAIIDRV---RQTLPH-ARIEGLVVQSMANRAGAQEL 589

Query: 121 SLLVDRTSGMVAFIASTQGGMDIE 144
            ++V++ +     I   +GG++ +
Sbjct: 590 RIVVEQDALFGPIIMLGEGGVEWQ 613


>gi|317057780|ref|YP_004106247.1| acetyl-CoA carboxylase, biotin carboxylase [Ruminococcus albus 7]
 gi|315450049|gb|ADU23613.1| acetyl-CoA carboxylase, biotin carboxylase [Ruminococcus albus 7]
          Length = 456

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 24/127 (18%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           QAK  +++  VPV  G    IS++HAA++  + L  P+ V  S         G       
Sbjct: 118 QAKETMKENGVPVIMGSDGAISNIHAAKTLSRDLGYPVLVKAS--------AGGGGRGIR 169

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
             +    +ES +K+   +     G+                VY+E   +  + + + +L 
Sbjct: 170 IVRSEDELESQMKAAKQEALACFGND--------------EVYIEKFIENPKHIEIQILA 215

Query: 125 DRTSGMV 131
           D    ++
Sbjct: 216 DDYGDVI 222


>gi|289579317|ref|YP_003477944.1| carbamoyl-phosphate synthase, large subunit [Thermoanaerobacter
           italicus Ab9]
 gi|289529030|gb|ADD03382.1| carbamoyl-phosphate synthase, large subunit [Thermoanaerobacter
           italicus Ab9]
          Length = 1072

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 31/102 (30%), Gaps = 12/102 (11%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL++ N+   KG    +V  A+     L  PL V  S +  G   +             
Sbjct: 672 KLLKELNINQPKGDYALTVEDAKDIALKLGFPLLVRPSYVIGGQSMEK------------ 719

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDG 111
           V     L   +    EI     I       G  V    V DG
Sbjct: 720 VNTLQELIDYVKHATEISPGKPILIDKYIDGREVEIDAVADG 761


>gi|124514744|gb|EAY56256.1| phosphoribosylglycinamide synthetase [Leptospirillum rubarum]
          Length = 425

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 15/88 (17%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  +R+  +P A   V     +   A++    P  V+K+   A G+             
Sbjct: 111 AKERMREAGIPTADFRVTPDSVSVREAVRVFGYP-SVLKADGLAQGK------------- 156

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQ 95
            GV V  S   +   + ++     + +Q
Sbjct: 157 -GVFVLHSPDDLEEALGKVFDHHALGEQ 183


>gi|21674492|ref|NP_662557.1| phosphoribosylamine--glycine ligase [Chlorobium tepidum TLS]
 gi|25091062|sp|Q8KBV8|PUR2_CHLTE RecName: Full=Phosphoribosylamine--glycine ligase; AltName:
           Full=GARS; AltName: Full=Glycinamide ribonucleotide
           synthetase; AltName: Full=Phosphoribosylglycinamide
           synthetase
 gi|21647682|gb|AAM72899.1| phosphoribosylamine--glycine ligase [Chlorobium tepidum TLS]
          Length = 425

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 14/87 (16%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK  ++++ +P A   V     +A++ ++T P    V+K+                  + 
Sbjct: 109 AKEFMKRHGIPTAGYEVFRDYASAKAFLETCPTFPQVIKA--------------SGLCAG 154

Query: 68  GGVRVESSLKSVISDIREILGSTLITK 94
            GV V  S    +  I E   S +   
Sbjct: 155 KGVVVAMSRDEALEAIHEFFESRIFGD 181


>gi|332520861|ref|ZP_08397321.1| carbamoyl-phosphate synthase, large subunit [Lacinutrix algicola
           5H-3-7-4]
 gi|332043391|gb|EGI79587.1| carbamoyl-phosphate synthase, large subunit [Lacinutrix algicola
           5H-3-7-4]
          Length = 950

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 15/77 (19%)

Query: 11  LLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGV 70
           LL++  +P  +  + ++   A +    L  P+ V  S +  G                G+
Sbjct: 690 LLKELEIPYPEFDIATTADEASAIADVLDFPILVRPSYVLGG---------------QGM 734

Query: 71  RVESSLKSVISDIREIL 87
           ++  + + +   + ++L
Sbjct: 735 KIVINKEELEKHVVDLL 751


>gi|325922458|ref|ZP_08184225.1| carbamoyl-phosphate synthase large subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325547078|gb|EGD18165.1| carbamoyl-phosphate synthase large subunit [Xanthomonas gardneri
           ATCC 19865]
          Length = 1080

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   +  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPRAEVAHTLEEALDIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIDIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|321315317|ref|YP_004207604.1| carbamoyl phosphate synthase large subunit [Bacillus subtilis BSn5]
 gi|320021591|gb|ADV96577.1| carbamoyl phosphate synthase large subunit [Bacillus subtilis BSn5]
          Length = 1071

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
           L +  VP   G   +SV  A S    +  P+ V  S +  G
Sbjct: 674 LGELGVPQPLGKTATSVDQAVSIASDIGYPVLVRPSYVLGG 714


>gi|291443191|ref|ZP_06582581.1| phosphoribosylglycinamide synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|291346138|gb|EFE73042.1| phosphoribosylglycinamide synthetase [Streptomyces roseosporus NRRL
           15998]
          Length = 401

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA 51
           Y+ +  L    V       ++S+  A      +  P+ V+K +  A
Sbjct: 103 YRGRQALAAAGVAQPVSRAVASLEEAREVAGAIGYPV-VLKPRALA 147


>gi|255521077|ref|ZP_05388314.1| carbamoyl phosphate synthase large subunit [Listeria monocytogenes
           FSL J1-175]
          Length = 990

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           + L+ +   PV +  +I ++  A + ++ +  P+ V  +    G  G
Sbjct: 133 RDLMNELGEPVPESDIIHNLDEAYTFVERIGYPVIVRPAYTLGGSGG 179


>gi|226331065|ref|ZP_03806583.1| hypothetical protein PROPEN_04995 [Proteus penneri ATCC 35198]
 gi|225201860|gb|EEG84214.1| hypothetical protein PROPEN_04995 [Proteus penneri ATCC 35198]
          Length = 889

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 50/141 (35%), Gaps = 17/141 (12%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +Q + ++  Y        +  +   A +  + +  P+ +         + +       ++
Sbjct: 484 HQVQPIMDAYGFNTLPTWIAHNAQEAVNIAEKIGYPVAL---------KLRSPDIPHKSE 534

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL--RELYLSLL 123
            +G +        V S    I+       +  P    +  + V+  A+    +EL +++ 
Sbjct: 535 VQGVMLYLRDSTEVSSAAHAIIERV---TELYPEAQ-IQGLLVQSMANRAGSQELRVAIE 590

Query: 124 VDRTSGMVAFIASTQGGMDIE 144
            D   G +  +   +GG++ +
Sbjct: 591 QDPIFGPLIVLG--EGGVEWQ 609


>gi|156932875|ref|YP_001436791.1| hypothetical protein ESA_00676 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531129|gb|ABU75955.1| hypothetical protein ESA_00676 [Cronobacter sakazakii ATCC BAA-894]
          Length = 887

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 82/238 (34%), Gaps = 34/238 (14%)

Query: 1   MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFK 60
           ++ HE   + +L  Y +      +      A      +  P+ +         + +    
Sbjct: 482 LDTHE--VRPILEAYGLHTLPTWIAGDSAEAVHIAGEIGYPVAL---------KLRSPDI 530

Query: 61  ELPADSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI--LREL 118
              ++ +G +    +   V      +L    +T        R++ + V+  A+    +EL
Sbjct: 531 PHKSEVQGVMLYLRTAHEVQRAADAMLDRVKMTWPQA----RIHGLLVQSMANRAGAQEL 586

Query: 119 YLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPL-IGVTSEDVASLCDML 177
            + ++          +   +GG++        P+    + + PL + +    V       
Sbjct: 587 RV-VVEHDPVFGPLIML-GEGGVEW------RPEAQAAVALPPLNMNLARYLVIQAIKSG 638

Query: 178 ELQGQARID------GGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
           +++G++ +         +L   +     D  +++ L+I+PL+   +     LD  +  
Sbjct: 639 KIRGRSALRPLDIAGLSELLVQVSNLVVDCPEIARLDIHPLLASGS-DFTALDVTMQL 695


>gi|17933427|gb|AAL48287.1|AF452495_1 aminoimidazole ribonucleotide carboxylase [Vigna unguiculata]
          Length = 634

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGK 56
           YQ K    K+ +P+ + + I  + +A+   +    PL +   ++   GRG 
Sbjct: 180 YQQKVHFSKHGIPLPEFMKIDDLESAKKVGELFGYPLMIKSRRLAYDGRGN 230


>gi|325294821|ref|YP_004281335.1| phosphoribosylglycinamide formyltransferase 2 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065269|gb|ADY73276.1| Phosphoribosylglycinamide formyltransferase 2 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 393

 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 28/139 (20%)

Query: 16  NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESS 75
            +  +K    S + + + A+K +  P+ VVK  + + G+G+             VR E  
Sbjct: 125 GLKTSKYRFASDLESYKKAVKEIGLPV-VVKPVMSSSGKGQS-----------IVRKEEE 172

Query: 76  LKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAF-- 133
           +                  Q    G   N V +E+  D   E+ L L V        F  
Sbjct: 173 IDEAFFYA-----------QRNARGKG-NAVIIEEFIDFDFEITL-LTVRTKEQGTLFCE 219

Query: 134 -IASTQGGMDIEEVAKDYP 151
            I   Q   D +E  +  P
Sbjct: 220 PIGHVQVDGDYQESWQPQP 238


>gi|126137706|ref|XP_001385376.1| hypothetical protein PICST_78660 [Scheffersomyces stipitis CBS
           6054]
 gi|126092654|gb|ABN67347.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 795

 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A+     SV  A+  I+T+   + V+K+   A G+             
Sbjct: 116 SKIFMDKHNIPTARFQNFKSVEEAKKHIETIDYKI-VLKADGIAAGK------------- 161

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV +  + +  +  + EI    ++ K  G  G   + + +E+  +      LS+L 
Sbjct: 162 -GVLIPETKEEALKGLNEI----MVDKNFGAAG---DEIVIEEFLEGDE---LSILT 207


>gi|297197541|ref|ZP_06914938.1| acyl-CoA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197715587|gb|EDY59621.1| acyl-CoA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 897

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 28/225 (12%)

Query: 10  ALLRKYNVP-VAKGVVISSVHAAESAIKTLPG--PLYVVKSQIHAGG-RGKGRFKELPAD 65
           ALL  Y +P +  G    +   A  A   L G     V+K+       + +     L   
Sbjct: 681 ALLSCYGIPQIPWGW-AETEEDAVLAADRLRGFDGRVVMKAHWPGLVHKTQQHAVHLDLR 739

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
               VR                   L T+  G     V       G     EL+  ++ D
Sbjct: 740 GDSQVRSA--------------FRDLETRFAGLMTGVVVQPLAARGT----ELFAGVVQD 781

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDML-ELQGQAR 184
              G +       GG   E +A    +       D    +TS   A L   +        
Sbjct: 782 EVFGPLVMFG--LGGTATEVLADHAARLAPLSDHDVHDLITSPRCAPLLFGVHGSAPVDL 839

Query: 185 IDGGDLFPNLYKAFCDK-DMSLLEINPLIIMKNGRLRVLDSKISF 228
                L   L +   D   ++  + NP ++   G++ VLD+++  
Sbjct: 840 EALEHLLLRLSRMAADLPQLAEADFNP-VLAAAGQVTVLDARVRL 883


>gi|229544083|ref|ZP_04433142.1| carbamoyl-phosphate synthase, large subunit [Bacillus coagulans
           36D1]
 gi|229325222|gb|EEN90898.1| carbamoyl-phosphate synthase, large subunit [Bacillus coagulans
           36D1]
          Length = 1067

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 34/184 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           + L+     P+    ++ ++    +  K +  P+ +  +    G                
Sbjct: 133 RQLMLDIGEPIPPSKIVENMEDGLAFAKKIGYPVIIRPAYTLGG---------------S 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G    ++ + +   +           Q G   S ++ V +E      +E+   ++  R +
Sbjct: 178 GGGFAANDEELREVL-----------QRGLDLSPIHQVLLEKSIKGWKEIEYEVV--RDA 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVA----SLCDMLELQGQAR 184
                I      +D   V       I       L  V  + +      +   L + G   
Sbjct: 225 NDTCIIVCNMENIDP--VGVHTGDSIVVAPSQTLSDVQYQLLRDASLKVIRALGVIGGCN 282

Query: 185 IDGG 188
           I   
Sbjct: 283 IQFA 286


>gi|20807298|ref|NP_622469.1| carbamoylphosphate synthase large subunit (split gene in MJ)
           [Thermoanaerobacter tengcongensis MB4]
 gi|22095499|sp|Q8RBK0|CARB_THETN RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|20515809|gb|AAM24073.1| Carbamoylphosphate synthase large subunit (split gene in MJ)
           [Thermoanaerobacter tengcongensis MB4]
          Length = 1072

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL++ N+   KG    +V  A+     L  PL V  S +  G
Sbjct: 672 KLLKELNINQPKGGYALTVEDAKDIALKLGFPLLVRPSYVIGG 714


>gi|298373329|ref|ZP_06983318.1| carbamoyl-phosphate synthase, large subunit [Bacteroidetes oral
           taxon 274 str. F0058]
 gi|298274381|gb|EFI15933.1| carbamoyl-phosphate synthase, large subunit [Bacteroidetes oral
           taxon 274 str. F0058]
          Length = 1065

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 52/187 (27%), Gaps = 40/187 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L +    PV    + +S+    +A   +  P+                 +        
Sbjct: 132 KELCKSLGEPVLPSKIANSMEEGLAAAAEIGYPVV---------------LRPAFTLGGT 176

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G             +R  L  +            V+ V VE      +E+   ++ D+  
Sbjct: 177 GGGFAEDEAEFCELMRNALALS-----------PVHQVLVEKSIKGFKEIEYEVIRDKND 225

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVT-------SEDVASLCDMLELQG 181
             +A         ++E +          +++ P   +T        +    +   L+++G
Sbjct: 226 TAIAI-------CNMENIDPVGVHTGDSMVVCPSQTLTNKEFQLLRDSALKIIRALKIEG 278

Query: 182 QARIDGG 188
              +   
Sbjct: 279 GCNVQFA 285


>gi|292493677|ref|YP_003529116.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus
           halophilus Nc4]
 gi|291582272|gb|ADE16729.1| carbamoyl-phosphate synthase, large subunit [Nitrosococcus
           halophilus Nc4]
          Length = 1073

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 38/139 (27%), Gaps = 32/139 (23%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    K  + V +  +  S+  A+   + L  P+ +         R          
Sbjct: 129 RDLFRLAMQKIGLDVPRSAIAYSLEEAQQVQRDLGFPIII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + +  +      L  +  ++           + +E+     +E  + ++ 
Sbjct: 180 G------IAYNREEFVEICERGLDLSPNSE-----------LLIEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDI 143
            R       I       D 
Sbjct: 222 -RDCKDNCIIICAIENFDP 239


>gi|269959586|ref|ZP_06173967.1| phosphoribosylamine--glycine ligase [Vibrio harveyi 1DA3]
 gi|269835644|gb|EEZ89722.1| phosphoribosylamine--glycine ligase [Vibrio harveyi 1DA3]
          Length = 429

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P       + +  A + ++    P+ VVK+   A G+              
Sbjct: 109 KDFLARHRIPTGAYANFTEIEPALAYVREQGAPI-VVKADGLAAGK-------------- 153

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L+     I+++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 154 GVIVAMTLEEAEDAIKDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 205

Query: 129 GMVA 132
            +  
Sbjct: 206 VLPM 209


>gi|269956504|ref|YP_003326293.1| carbamoyl-phosphate synthase large subunit [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305185|gb|ACZ30735.1| carbamoyl-phosphate synthase, large subunit [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 1126

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 4/117 (3%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L    +P        ++  A      +  P+ V  S +  G   +  +          
Sbjct: 682 QVLLDAGLPAPAFGTARTLPQAVGVADQIGYPVLVRPSYVLGGRGMEIVYDRPQLTEYVE 741

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126
             + +  +SV S     L + L+  +    G  ++     D      EL+L  +++ 
Sbjct: 742 RALAAQAESVASSGTTALAAPLLIDRFLDNGMEIDV----DALFDGEELFLGGVMEH 794


>gi|239939762|ref|ZP_04691699.1| phosphoribosylglycinamide synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|239986245|ref|ZP_04706909.1| phosphoribosylglycinamide synthetase [Streptomyces roseosporus NRRL
           11379]
          Length = 388

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA 51
           Y+ +  L    V       ++S+  A      +  P+ V+K +  A
Sbjct: 90  YRGRQALAAAGVAQPVSRAVASLEEAREVAGAIGYPV-VLKPRALA 134


>gi|254511818|ref|ZP_05123885.1| RimK-like ATP-grasp domain family protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221535529|gb|EEE38517.1| RimK-like ATP-grasp domain family protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 681

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 45/347 (12%), Positives = 99/347 (28%), Gaps = 60/347 (17%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K + +   V    G   +I     A      +  P+ +  S                  
Sbjct: 119 SKKIAQDAGVSTVPGYMGLIEDAEEAVKISNQIGYPVMIKAS---------------AGG 163

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              G+R+  +        +        +K         + +++E      R + + +L D
Sbjct: 164 GGKGMRIAWNDDEAREGFQ-------SSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCD 216

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GVTSEDVASLCDMLEL-QGQA 183
                +      +    I+   +   ++     +D        E   +L   ++      
Sbjct: 217 SHGNGIYL---GERECSIQRRNQKVVEEAPSPFLDVATRKAMGEQAVALAKAVDYASAGT 273

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
                D   N Y  F + +  L   +P+  +  G  L     +++ D+       D++ L
Sbjct: 274 VEFIVDGDKNFY--FLEMNTRLQVEHPVTELITGVDLVEQMIRVAADEKLTIAQEDVK-L 330

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNIG------------CMVNG-------AGLAMATM 283
              + E+    E       ++   G +              +VNG        G A    
Sbjct: 331 TGWAIENRLYAEDPYRG--FLPSIGRLTRYRPPQETAAGPMLVNGKWQGEAPEGTAAVRN 388

Query: 284 DIIKLYGGAPANFLD------VGGGADQDKVAAAFKIITSDSSVKGI 324
           D     GG  + + D            +++   A ++      V+GI
Sbjct: 389 DTGVYEGGEISMYYDPMIAKLCTWAPTREQAIEAMRVALDSFEVEGI 435


>gi|118466762|ref|YP_882571.1| carbamoyl phosphate synthase large subunit [Mycobacterium avium
           104]
 gi|118168049|gb|ABK68946.1| carbamoyl-phosphate synthase, large subunit [Mycobacterium avium
           104]
          Length = 1117

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 33/167 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K ++ K     A+  V  ++      +  L  P+ V         R       L +    
Sbjct: 138 KDIVAKVGGESARSRVCFTMDEVRETVAELGLPVVV---------RPSFTMGGLGSG--- 185

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              +  S++ V      + G+ L    +         V +E+     +E  L L+ D   
Sbjct: 186 ---MARSVEEV----DRMAGAGLAESPSAN-------VLIEESIYGWKEFELELMRDGND 231

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCD 175
            +V           IE V          + + P + +T  +   + D
Sbjct: 232 NVVVV-------CSIENVDPMGVHTGDSVTVAPAMTLTDREYQRMRD 271


>gi|148263883|ref|YP_001230589.1| acetyl-CoA carboxylase, biotin carboxylase [Geobacter
           uraniireducens Rf4]
 gi|146397383|gb|ABQ26016.1| acetyl-CoA carboxylase carboxyltransferase subunit alpha [Geobacter
           uraniireducens Rf4]
          Length = 446

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 66/205 (32%), Gaps = 36/205 (17%)

Query: 14  KYNVPVAKGVV--ISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           K  VP+  G    ++ V+ A    K +  P+ ++K+    GGRG                
Sbjct: 125 KEGVPILPGTKEGVNDVNEAVKIAKKIGFPV-IIKATAGGGGRGM-------KIVHSPAT 176

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
           + ++  +  ++ +   G+                VY+E   +  R + + +L D+     
Sbjct: 177 LPNAFATARAEAQAGFGNP--------------EVYIEKYCEEPRHVEIQILADKHGN-- 220

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDP-LIGVTSEDVASLCDMLELQGQARIDGGDL 190
             I   +    I+   +   ++    +  P L     +        +       ++    
Sbjct: 221 -VIHLGERDCSIQRRHQKIIEEAPSTVSTPELRKAMGDAAVRAAKAVGYNSVGTMEFL-- 277

Query: 191 FPNLYKAFCDKDMSLLEINPLIIMK 215
                    + D   +E+N  + ++
Sbjct: 278 ------VDKNNDFYFMEMNTRVQVE 296


>gi|330501706|ref|YP_004378575.1| phosphoribosylamine--glycine ligase [Pseudomonas mendocina NK-01]
 gi|328915992|gb|AEB56823.1| phosphoribosylamine--glycine ligase [Pseudomonas mendocina NK-01]
          Length = 429

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + +  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHKIPTADYQNFTEIEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G   + V +E+  D   E    ++VD  +
Sbjct: 153 GVIVAMTLSEAEDAVRDMLA----GNAFGDAG---SRVVIEEFLD-GEEASFIVMVDGEN 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|295397535|ref|ZP_06807616.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Aerococcus viridans ATCC 11563]
 gi|294974206|gb|EFG49952.1| phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
           [Aerococcus viridans ATCC 11563]
          Length = 377

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 31/125 (24%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L+K  +P+A    I +    + AI+ L  P  +   Q                D KG
Sbjct: 115 KDFLKKSGIPIAAYAKIETEENLKKAIEGLGYPCVLKTVQ-------------GGYDGKG 161

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
            V +ES       +   ++              +  CV  E+     +E  LS++V R +
Sbjct: 162 QVVLESDAD--FEEASALI-------------KKGTCVL-EEWVSFEKE--LSIMVARNA 203

Query: 129 GMVAF 133
                
Sbjct: 204 SGNVV 208


>gi|289425773|ref|ZP_06427528.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes SK187]
 gi|289427944|ref|ZP_06429648.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes J165]
 gi|289153879|gb|EFD02585.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes SK187]
 gi|289158827|gb|EFD07027.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes J165]
          Length = 442

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 109 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDGLAGGK------------- 154

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 155 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 199


>gi|218283587|ref|ZP_03489559.1| hypothetical protein EUBIFOR_02149 [Eubacterium biforme DSM 3989]
 gi|218215736|gb|EEC89274.1| hypothetical protein EUBIFOR_02149 [Eubacterium biforme DSM 3989]
          Length = 410

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 41/220 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++ KYN+P A       + +A + ++    P+ +               KE    + 
Sbjct: 106 AKKIMAKYNIPTAAYKTFYDLESAWAYVQEQGAPIVI---------------KEDGLKAG 150

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V S+L+      +E L      +         N V +E+      E  L  LV   
Sbjct: 151 KGVTVASTLEQ----AKEALDIAFAIEN--------NSVVIEECL-FGFEFSLICLVHNE 197

Query: 128 SGMVAFIASTQ-----GGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQ 182
           + +   +A        G              + K+  + +    +E +  +   +     
Sbjct: 198 TVVPLEVAQDHKCVFDGDKGPNTGGMGSYSPVKKITSEIIDEAMNEIMKPMASAM----- 252

Query: 183 ARIDGGDLFPNLY--KAFCDKDMSLLEINPLIIMKNGRLR 220
              +G      LY      +K +  +E N         + 
Sbjct: 253 -VKEGVPFTGFLYGGLMLTEKGIKTIEFNARFGDPEAEVI 291


>gi|148272964|ref|YP_001222525.1| putative carbamoyl-phosphate synthase large subunit [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|167006437|sp|A5CRX5|CARB_CLAM3 RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|147830894|emb|CAN01838.1| putative carbamoyl-phosphate synthase large subunit [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 1096

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L+ +    VA+  V  ++  A    + L  P  V++     GG G G           
Sbjct: 133 KDLVIESGADVARSHVAKTLEQAVEFAEDLGYP-LVIRPSFTMGGLGSG----------- 180

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
                 + + +   + + L S+  T+           V +E+     +E  L L+ D   
Sbjct: 181 ---FAHTRQELERMVADGLQSSPTTE-----------VLLEESILGWKEYELELMRDTAD 226

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             V           IE V          + + P + +T  +   + D+
Sbjct: 227 NTVVV-------CSIENVDPVGVHTGDSITVAPALTLTDREYQHMRDI 267


>gi|116754105|ref|YP_843223.1| pyruvate carboxylase subunit A [Methanosaeta thermophila PT]
 gi|116665556|gb|ABK14583.1| pyruvate carboxylase subunit A [Methanosaeta thermophila PT]
          Length = 499

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           A+ +++   VP+  G    IS         + +  P+ ++K     GG G  +  + P D
Sbjct: 119 ARQMMKDAGVPIVPGTERGISDPEEIADVAERIGYPI-IIKPAAGGGGIGM-KIVDRPED 176

Query: 66  SKGGVRVESSLK 77
               V    S+ 
Sbjct: 177 LAPAVVSAQSIA 188


>gi|111018241|ref|YP_701213.1| potassium-transporting ATPase B chain [Rhodococcus jostii RHA1]
 gi|110817771|gb|ABG93055.1| potassium-transporting ATPase B chain [Rhodococcus jostii RHA1]
          Length = 701

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 12/132 (9%)

Query: 256 KQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKII 315
            Q  +S + +DG    +  GA  A+ T   ++  GG  A+ +        +++A A    
Sbjct: 393 AQTRMSGLDIDG--ARIRKGASDAVLTW--VRALGGRAASAV----TDSVNRIAQAGGTP 444

Query: 316 TSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESG 375
              ++V+G    + G I   DV+  GI     E++      + + G N      + AE+G
Sbjct: 445 LVVATVRGDAATVLGVIALSDVVKPGIAERFAELRAMGIRTVMITGDNPLTAKAIAAEAG 504

Query: 376 LNVITAIDLDDA 387
           ++      + +A
Sbjct: 505 VD----DFMAEA 512


>gi|86131134|ref|ZP_01049733.1| phosphoribosylamine-glycine ligase [Dokdonia donghaensis MED134]
 gi|85818545|gb|EAQ39705.1| phosphoribosylamine-glycine ligase [Dokdonia donghaensis MED134]
          Length = 422

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKGVVIS--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +  +N+P A     +  ++   ++ ++TL  P YV+K+   A G+           
Sbjct: 110 AKEFMMAHNIPTAAYEAFTSETLDKGQAFLETLQAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +  +L+    ++  +LG           G     V +E+  D   EL + +L D
Sbjct: 158 ---GVLIIDNLEEAKQELANMLGGKF--------GDASATVVIEEFLD-GIELSVFVLTD 205

Query: 126 RTSGMVA 132
             +  V 
Sbjct: 206 GKNYKVL 212


>gi|282859685|ref|ZP_06268787.1| phosphoribosylamine--glycine ligase [Prevotella bivia JCVIHMP010]
 gi|282587603|gb|EFB92806.1| phosphoribosylamine--glycine ligase [Prevotella bivia JCVIHMP010]
          Length = 420

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 25/108 (23%)

Query: 8   AKALLRKYNVPVAKGVVI--SSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AKA +++YN+P A       +++      ++TL  P YV+K+   A G+           
Sbjct: 110 AKAFMQRYNIPTAAYATFDSTTIQEGMRFLETLKAP-YVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
              GV +  +L+    +++E+LG           G+    V +E+   
Sbjct: 158 ---GVLILDTLEEAKRELKEMLGGMF--------GNASAKVVIEEFLS 194


>gi|149195024|ref|ZP_01872117.1| carbamoyl-phosphate synthase large subunit [Caminibacter
           mediatlanticus TB-2]
 gi|149134945|gb|EDM23428.1| carbamoyl-phosphate synthase large subunit [Caminibacter
           mediatlanticus TB-2]
          Length = 1090

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 51/168 (30%), Gaps = 33/168 (19%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  + K  + + K    +++  A   ++ +  P+ V         R       L +    
Sbjct: 131 KKAMEKIGMDLPKSATANNLEDAIKIVEEIGFPVIV---------RAAFTLGGLGSG--- 178

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
              V  ++       +           TG   S +N + + +     +E  + ++ D+  
Sbjct: 179 ---VAYNMDEFKELAK-----------TGIESSPINEIEIMESMLGWKEYEMEVIRDKED 224

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
             +           IE            + + P + +T ++   + D 
Sbjct: 225 NCIIV-------CSIENFDPMGVHTGDSITVAPALTLTDKEYQRMRDA 265


>gi|145250165|ref|XP_001396596.1| phosphoribosylformylglycinamidine cyclo-ligase [Aspergillus niger
           CBS 513.88]
 gi|134082110|emb|CAK42226.1| unnamed protein product [Aspergillus niger]
          Length = 808

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 22/103 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++++N+P A          A   + ++     V+K+   AGG+             
Sbjct: 115 SKDFMKRHNIPTAAYENFYEYEPARQYLDSV-SHQVVIKADGLAGGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
            GV + ++ +     +RE+    ++  Q G  G   + V +E+
Sbjct: 161 -GVIIPTTKEEAHQALREM----MVENQFGEAG---SEVVIEE 195


>gi|88800599|ref|ZP_01116160.1| putative alcohol dehydrogenase/acetaldehyde dehydrogenase [Reinekea
           sp. MED297]
 gi|88776654|gb|EAR07868.1| putative alcohol dehydrogenase/acetaldehyde dehydrogenase [Reinekea
           sp. MED297]
          Length = 887

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 13/110 (11%)

Query: 297 LDVGGGADQDKVAAAFKIITS----DSSVKGILINIFGGIMRCDVLVKGILSAVKEVKIN 352
           +D    A +++ A     I S    D   + ILIN   G +   ++ +  ++  +   I 
Sbjct: 249 MDEVYDAVKERFANYGGYILSKEEADKVRRVILIN---GALNAKIVGQSAITIAEMAGIT 305

Query: 353 IPLVMRL---EGANVDIGNRLIAES---GLNVITAIDLDDAAQKIVHAVK 396
           +P   ++   EGA ++       E     L +  A   +DA +K V  V+
Sbjct: 306 VPPYTKVLIGEGAELNEAEEFAHEKLSPTLGMFRASSFEDAVEKAVKMVE 355


>gi|332291844|ref|YP_004430453.1| phosphoribosylamine/glycine ligase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169930|gb|AEE19185.1| phosphoribosylamine/glycine ligase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 422

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 26/127 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           AK  +  +++P A      +V       A      P YV+K+   A G+           
Sbjct: 110 AKEFMIAHDIPTAAYE-AFTVETLEKGQAFLETLNPPYVLKADGLAAGK----------- 157

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
              GV +   L     ++  +LG           G     V +E+  D   EL + +L D
Sbjct: 158 ---GVLIIEDLNEAKEELASMLGGKF--------GDASTTVVIEEFLD-GIELSVFVLTD 205

Query: 126 RTSGMVA 132
             +  V 
Sbjct: 206 GKNYKVL 212


>gi|293604150|ref|ZP_06686558.1| cyanophycin synthase [Achromobacter piechaudii ATCC 43553]
 gi|292817375|gb|EFF76448.1| cyanophycin synthase [Achromobacter piechaudii ATCC 43553]
          Length = 856

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K LL    VPV  G  +++   A  A + L GP+ VVK +  + GRG     E     + 
Sbjct: 209 KMLLDAAGVPVPMGRSVTTAEEAWEAAQELGGPV-VVKPRDGSQGRGVAVNIE---TRER 264

Query: 69  GVRVESSLKSVISDI 83
            ++     + V S++
Sbjct: 265 VIQAFEVAEEVSSEV 279


>gi|255528110|ref|ZP_05394940.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           carboxidivorans P7]
 gi|255508206|gb|EET84616.1| carbamoyl-phosphate synthase, large subunit [Clostridium
           carboxidivorans P7]
          Length = 864

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 12/106 (11%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           +  L+K N+P   G  + S+  A  A++ L  P+ V  S +  GGR      E+  D KG
Sbjct: 671 RKFLQKLNIPSPTGTAVISIEEAYMAVEELQYPVVVRPSYV-IGGRAM----EVVYDKKG 725

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADI 114
             +  +    V +D   ++   +        G+ +    + DG DI
Sbjct: 726 LTKYMNEAVQVSTDHTILIDRYI-------KGTEIEVDAICDGEDI 764


>gi|110801586|ref|YP_698003.1| phosphoribosylamine--glycine ligase [Clostridium perfringens SM101]
 gi|110682087|gb|ABG85457.1| phosphoribosylamine--glycine ligase [Clostridium perfringens SM101]
          Length = 416

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           +K  ++KY V  A   V      A+S ++    P  V+K+   A G+G
Sbjct: 106 SKDFMKKYGVKTADYEVFYDYEEAKSYLENCKYPR-VIKADGLAAGKG 152


>gi|94496130|ref|ZP_01302708.1| phosphoribosylamine--glycine ligase [Sphingomonas sp. SKA58]
 gi|94424309|gb|EAT09332.1| phosphoribosylamine--glycine ligase [Sphingomonas sp. SKA58]
          Length = 430

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 20/95 (21%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L ++ N+P A  V ++S   A +A+     P+ V+K+   A G+              
Sbjct: 110 KDLCKRANIPTAAYVRVTSKDGAIAALDDFALPV-VIKADGLAAGK-------------- 154

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
           GV +  S +  +  +  +      +   G  G  V
Sbjct: 155 GVIIAQSREEALEALDSMF-----SGAFGAAGEEV 184


>gi|297588117|ref|ZP_06946761.1| pyruvate carboxylase [Finegoldia magna ATCC 53516]
 gi|297574806|gb|EFH93526.1| pyruvate carboxylase [Finegoldia magna ATCC 53516]
          Length = 1139

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           Q+K + +K  V   +GV   I + + A      +  P+ V K+    GGRG
Sbjct: 121 QSKLVAKKAGVQTIEGVETPIRNKNEALEIANQIGYPVMV-KACAGGGGRG 170


>gi|313126888|ref|YP_004037158.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Halogeometricum
           borinquense DSM 11551]
 gi|312293253|gb|ADQ67713.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Halogeometricum
           borinquense DSM 11551]
          Length = 383

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHA-GGRGKGRFKE--LPAD 65
           K  L    VPV     +       +A+        ++K++     GRG    ++     D
Sbjct: 112 KRALDDAGVPVPPFRRVDDAEDLRAALDEFGS--VMLKARTGGYDGRGNVPVRDESEVED 169

Query: 66  SKGGVRVESSLKSVISDIREI 86
           +   V   +  ++ +   RE+
Sbjct: 170 ALDAVGGPAMAEAFVDFAREL 190


>gi|223984193|ref|ZP_03634342.1| hypothetical protein HOLDEFILI_01635 [Holdemania filiformis DSM
           12042]
 gi|223963851|gb|EEF68214.1| hypothetical protein HOLDEFILI_01635 [Holdemania filiformis DSM
           12042]
          Length = 330

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 31/125 (24%), Gaps = 26/125 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +   P  +  V  ++         +  P+                 +        
Sbjct: 133 KDLCLRIGQPCLESYVARTIEEVVEYANKIGYPVV---------------LRPAFTLGGT 177

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           G         VI+  +  L             S V+ V VE      +E+   ++ D   
Sbjct: 178 GGGFAYDDAEVIALGKNAL-----------KLSPVSEVLVEKSIKGYKEIEFEVMRDHND 226

Query: 129 GMVAF 133
             +  
Sbjct: 227 TAIVI 231


>gi|254478598|ref|ZP_05091971.1| carbamoyl-phosphate synthase, large subunit [Carboxydibrachium
           pacificum DSM 12653]
 gi|214035452|gb|EEB76153.1| carbamoyl-phosphate synthase, large subunit [Carboxydibrachium
           pacificum DSM 12653]
          Length = 1072

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL++ N+   KG    +V  A+     L  PL V  S +  G
Sbjct: 672 KLLKELNINQPKGGYALTVEDAKDIALKLGFPLLVRPSYVIGG 714


>gi|209546456|ref|YP_002278374.1| Carbamoyl-phosphate synthase L chain ATP-binding [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537700|gb|ACI57634.1| Carbamoyl-phosphate synthase L chain ATP-binding [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 621

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIK--TLPGPLYV 44
           AK L++   VPV  G +      A  A +   +  P+ +
Sbjct: 119 AKELMQAAGVPVTPGYLGPDQSEARLAAEADAIGYPVLI 157


>gi|167630179|ref|YP_001680678.1| carbamoyl-phosphate synthase, large subunit [Heliobacterium
           modesticaldum Ice1]
 gi|167592919|gb|ABZ84667.1| carbamoyl-phosphate synthase, large subunit [Heliobacterium
           modesticaldum Ice1]
          Length = 1063

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 36/94 (38%), Gaps = 1/94 (1%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            +L +  +    G   +SV  A    + +  P+ V  S +  G   +  + +   +S   
Sbjct: 668 QVLTELGITKPPGRTATSVEGALEVAREIGYPVLVRPSYVLGGRAMEIVYNDEDLESYMA 727

Query: 70  VRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
             V+ + +  +   + ++G+ +        G +V
Sbjct: 728 NAVKVNPEHPVLVDKYLIGTEIEVDAI-ADGEQV 760


>gi|134046360|ref|YP_001097845.1| pyruvate carboxylase subunit A [Methanococcus maripaludis C5]
 gi|132663985|gb|ABO35631.1| pyruvate carboxylase subunit A [Methanococcus maripaludis C5]
          Length = 497

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           AK  ++   VPV  G    I S   A      +  P+ ++K+    GG G
Sbjct: 119 AKKAMKIAGVPVLPGREEPIESEEGAIEVADEIGYPV-IIKASAGGGGIG 167


>gi|254251818|ref|ZP_04945136.1| Phosphoribosylamine-glycine ligase [Burkholderia dolosa AUO158]
 gi|124894427|gb|EAY68307.1| Phosphoribosylamine-glycine ligase [Burkholderia dolosa AUO158]
          Length = 426

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A     S   AA + I     P+ VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYETFSDAAAAHAYIDAKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V ++L+   + +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVATTLEEAHAAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|67540742|ref|XP_664145.1| hypothetical protein AN6541.2 [Aspergillus nidulans FGSC A4]
 gi|40738691|gb|EAA57881.1| hypothetical protein AN6541.2 [Aspergillus nidulans FGSC A4]
          Length = 750

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 26/105 (24%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLY--VVKSQIHAGGRGKGRFKELPAD 65
           +K  ++++N+P A      +    E A K L    +  V+K+   AGG+           
Sbjct: 56  SKDFMKRHNIPTAAY---ENFTEYEKARKYLDSVSHNVVIKADGLAGGK----------- 101

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVED 110
              GV + +S +     +RE+    ++ +Q G  G   N V +E+
Sbjct: 102 ---GVIIPTSKEEAHQALREM----MLDRQFGDAG---NEVVIEE 136


>gi|327335148|gb|EGE76858.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL097PA1]
          Length = 439

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 106 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDGLAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 152 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 196


>gi|325953939|ref|YP_004237599.1| carbamoyl-phosphate synthase, large subunit [Weeksella virosa DSM
           16922]
 gi|323436557|gb|ADX67021.1| carbamoyl-phosphate synthase, large subunit [Weeksella virosa DSM
           16922]
          Length = 1075

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 59/215 (27%), Gaps = 38/215 (17%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           L +  V  A+   + +V  A +A K +  PL +  +    G                G  
Sbjct: 134 LDQIGVLTARSEAVETVEDAMAAGKKIGFPLIIRAAYALGGL---------------GSG 178

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
             ++ + +   + +    +             N V VE+     +E+   ++  R +   
Sbjct: 179 FANNEEELYELVEKAFTYS-------------NQVLVEESLKGWKEIEYEVV--RDAADN 223

Query: 132 AFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLC----DMLELQGQARIDG 187
                     D   +     + I       L       +  +       L + G+  I  
Sbjct: 224 CITVCNMENFDP--IGVHTGESIVVAPSQTLTSSEYHKLREIAIRTIRHLGVVGECNIQY 281

Query: 188 G-DLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRV 221
             D     Y+   + +  L   + L     G    
Sbjct: 282 AFDPVSEEYRV-IEVNARLSRSSALASKATGYPLA 315


>gi|322433686|ref|YP_004215898.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Acidobacterium sp. MP5ACTX9]
 gi|321161413|gb|ADW67118.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Acidobacterium sp. MP5ACTX9]
          Length = 388

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 42/186 (22%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L K+  PV +   + S+    +AI  L               R   +      D +G
Sbjct: 113 KNWLTKHGFPVGEFRAVRSLDETRAAIAELG--------------RCFCKSATGGYDGRG 158

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
             +V  S + V           L   +    G  V    VE    + RE  +S++V R  
Sbjct: 159 QGKVGFSAEPVTEA------DVLGAWEALGEGPGV----VEKAVHLERE--ISVMVAR-- 204

Query: 129 GMVAFIASTQGGMDIEEVAKDYPQ------KIFKLLIDPLIGVTSEDVA-SLCDMLELQG 181
                  S +G + +   A ++ +       +    I P +   + ++A  + D  +L+G
Sbjct: 205 -------SPRGEVKVYPAAWNHHENQILDWSVIPAPIPPSMEAEAREIAYEIADTFQLEG 257

Query: 182 QARIDG 187
              ++ 
Sbjct: 258 LLAVEM 263


>gi|225077324|ref|ZP_03720523.1| hypothetical protein NEIFLAOT_02383 [Neisseria flavescens
           NRL30031/H210]
 gi|224951316|gb|EEG32525.1| hypothetical protein NEIFLAOT_02383 [Neisseria flavescens
           NRL30031/H210]
          Length = 423

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 19/96 (19%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA + KY +P A+     +   A   +     P+ V+K+   A G+             
Sbjct: 106 AKAFMAKYKIPTAQYQTFENADVAHDYVNQKGAPI-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRV 103
            GV V  +L    + I ++L    +  + G  G+RV
Sbjct: 152 -GVIVAMTLDEAHATIDDML----LDNKMGNAGARV 182


>gi|213401841|ref|XP_002171693.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Schizosaccharomyces japonicus yFS275]
 gi|211999740|gb|EEB05400.1| carbamoyl-phosphate synthase arginine-specific large chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 1125

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           L + N+P+A+ V +SSV  A ++ + +  P+ V
Sbjct: 224 LNEINIPIAESVAVSSVDDALASAEKIGYPVIV 256


>gi|205356269|ref|ZP_03223035.1| phosphoribosylamine glycine ligase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345874|gb|EDZ32511.1| phosphoribosylamine glycine ligase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 416

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+ L+KY +  AK +  + +  A++ I +L  P  VVK+     G+              
Sbjct: 105 KSFLKKYRIKTAKFLNTNDIEKAKNFIYSL-TPPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  + +  I +  ++L      +  G  G  V    +E+  D
Sbjct: 150 GVIIAKTHEEAIEETAKMLN----GESFGDAGKLV---VIEEFLD 187


>gi|251794896|ref|YP_003009627.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Paenibacillus sp. JDR-2]
 gi|247542522|gb|ACS99540.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
           [Paenibacillus sp. JDR-2]
          Length = 388

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 6/126 (4%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  +    V VA    I S     +A +    P  V+K+ +  G  GKG++     D   
Sbjct: 115 KRAIEAAGVRVAPYSEIRSSEELRAAAEKFGLPC-VLKTAM-GGYDGKGQWVIRSFDEIE 172

Query: 69  GVRVESSLKSVISDIREIL---GSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
                 S   V   + + +       +     P G  +      +   +   L+LS++  
Sbjct: 173 EAYETLSRAGVELVLEQFIKFDKELSVIAARSPQGE-IKAFPAAENIHVENILHLSIVPA 231

Query: 126 RTSGMV 131
           R +  V
Sbjct: 232 RIAESV 237


>gi|183221439|ref|YP_001839435.1| succinyl-CoA synthetase subunit alpha [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911527|ref|YP_001963082.1| succinyl-CoA synthetase subunit alpha [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167776203|gb|ABZ94504.1| Succinyl-CoA synthetase, alpha subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167779861|gb|ABZ98159.1| Succinyl-CoA synthetase alpha chain (SCS-alpha) [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 296

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 262 YIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQ-DKVAAAFKIITSDSS 320
           +I   GNIG +     L   ++  +   G   +  + +GG          A +++  D  
Sbjct: 147 FIHTPGNIGIVSRSGTLTYESVASLTAAGLGQSTCIGIGGDPVPGMNHVEAVRLLNEDPD 206

Query: 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRL 370
            +GI++     I       +   +A  +  +  P+V  + G     G R+
Sbjct: 207 TEGIVM-----IGEIGGTSEEEAAAYIKAHVKKPVVGFIAGQTAPPGKRM 251


>gi|111024102|ref|YP_707074.1| carbamoyl phosphate synthase large subunit [Rhodococcus jostii
           RHA1]
 gi|110823632|gb|ABG98916.1| carbamoyl-phosphate synthase large subunit [Rhodococcus jostii
           RHA1]
          Length = 1122

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
            +L +  +P  K    ++   A      +  P+ V  S +  GGRG
Sbjct: 691 KVLVEAGLPAPKFGTATTFAGAREIAAGIGYPVLVRPSYVL-GGRG 735


>gi|320581821|gb|EFW96040.1| hypothetical protein HPODL_2323 [Pichia angusta DL-1]
          Length = 789

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  ++K+N+P A+    +   AA+  I        V+K+                  + 
Sbjct: 113 SKDFMKKHNIPTARYENFTDYEAAKQYIAN-SSHNLVIKA--------------SGIAAG 157

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV + ++ +     I+EI    ++ +Q G  G  V    +E+  +      LS+L 
Sbjct: 158 KGVLIPANKQEAYEAIKEI----MVNRQFGSAGDEV---VIEEFLEGDE---LSILC 204


>gi|304311953|ref|YP_003811551.1| Carbamoyl-phosphate synthase large chain [gamma proteobacterium
           HdN1]
 gi|301797686|emb|CBL45908.1| Carbamoyl-phosphate synthase large chain [gamma proteobacterium
           HdN1]
          Length = 1073

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 55/197 (27%), Gaps = 48/197 (24%)

Query: 20  AKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSV 79
                  S   A    + +  PL V  S +  G                 + +  S   +
Sbjct: 689 PPNRTARSEEEAVRYAEEIGYPLVVRPSYVLGG---------------RAMEIVYSESEL 733

Query: 80  ISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQG 139
              +RE +    ++            V ++   D   E+ L L+ D  +       S  G
Sbjct: 734 RRYMREAVQ---VSNDCP--------VLLDHFLDDAIEVDLDLVSDGRT-------SVIG 775

Query: 140 GM--DIEEVAKDYPQKIFKLLIDPLI----GVTSEDVASLCDMLELQGQARIDGGDLFPN 193
           G+   IE+           L    L         E    +   L + G   +        
Sbjct: 776 GILQHIEQAGIHSGDSACSLPPYSLSADLQETMREQARRMAAELGVVGLMNVQF------ 829

Query: 194 LYKAFCDKDMSLLEINP 210
              A    D+ +LE+NP
Sbjct: 830 ---AVKKNDVYVLEVNP 843


>gi|299069331|emb|CBJ40597.1| Biotin carboxylase (Acetyl-CoA carboxylase subunit A) (ACC)
           [Ralstonia solanacearum CMR15]
          Length = 463

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 100/330 (30%), Gaps = 41/330 (12%)

Query: 8   AKALLRKYNVPVAKG---VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           AK  +R+  VP   G    +        +    +  P+ V  +         G       
Sbjct: 127 AKRAMREAGVPCVPGPDTSLPEDPAEVLAIAHGIGFPVIVKAA--------GGGGGRGMR 178

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  +L     + R   G+                VY+E      R + + +L 
Sbjct: 179 VVHEASALADALALTREEARRAFGNP--------------EVYIEKFLTHPRHVEIQVLA 224

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID-PLIGVTSEDVASLCDMLELQGQA 183
           DR      ++ S      ++   +   ++     ID  LI    E  A+ C  +   G  
Sbjct: 225 DRYGHA-VWLGSR--DCSLQRRHQKVIEEAPAPGIDAALIAEVGERCAAACRQIGYCGVG 281

Query: 184 RIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLDIQEL 242
             +        Y  F + +  L   +P+  M +G  +     +++  +    R  DI   
Sbjct: 282 TFEFLYENGAFY--FIEMNTRLQVEHPVTEMTSGIDIVQQQIRVARGEPLTLRQDDI-AC 338

Query: 243 RDVSEEDSREIEAKQHNLSYIALDGNI--GCMVNGAGLAMATMDIIKLY---GGAPANFL 297
           R  + E     E   H  +++   G I    +  G G+ + T                  
Sbjct: 339 RGHALECRINAE---HPDTFMPSPGVITGWQLPGGYGVRVDTHAGAGYRVPSHYDSMIAK 395

Query: 298 DVGGGADQDKVAAAFKIITSDSSVKGILIN 327
            +  GA ++      ++   +  V GI  N
Sbjct: 396 LIVHGASREDALQRMRLALDELQVDGIATN 425


>gi|261839817|gb|ACX99582.1| biotin carboxylase [Helicobacter pylori 52]
          Length = 455

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK+++++  +PV +G   ++ S   AE     +  P+ +
Sbjct: 130 AKSVMKEAGMPVIEGSDGLLKSYQEAEEIADKIGYPVII 168


>gi|109947094|ref|YP_664322.1| biotin carboxylase [Helicobacter acinonychis str. Sheeba]
 gi|109714315|emb|CAJ99323.1| accC [Helicobacter acinonychis str. Sheeba]
          Length = 455

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK+++++  +PV +G   ++ S   AE     +  P+ +
Sbjct: 130 AKSVMKEAGMPVIEGSDGLLKSYQEAEEIADKIGYPVII 168


>gi|146295792|ref|YP_001179563.1| Mur ligase middle domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409368|gb|ABP66372.1| Mur ligase, middle domain protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 742

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K +L+    PV    V+ + +    A+K L  PL +
Sbjct: 172 KRVLQANGFPVPMFRVVFTQNELVQAVKELGFPLSI 207


>gi|325996351|gb|ADZ51756.1| Biotin carboxylase of acetyl-CoA carboxylase [Helicobacter pylori
           2018]
          Length = 455

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK+++++  +PV +G   ++ S   AE     +  P+ +
Sbjct: 130 AKSVMKEAGMPVIEGSEGLLKSYQEAEEIADKIGYPVII 168


>gi|313820905|gb|EFS58619.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL036PA1]
 gi|313824025|gb|EFS61739.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL036PA2]
 gi|314926932|gb|EFS90763.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL036PA3]
          Length = 439

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 106 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDGLAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 152 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 196


>gi|309803567|ref|ZP_07697659.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 11V1-d]
 gi|308164315|gb|EFO66570.1| carbamoyl-phosphate synthase, large subunit [Lactobacillus iners
           LactinV 11V1-d]
          Length = 1055

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYV 44
           K L ++   PV   + + +   A +  + +  P+ V
Sbjct: 133 KKLCKQLGEPVPPSLTVHNAEDALTFAEKIGYPIIV 168


>gi|307244092|ref|ZP_07526211.1| phosphoribosylamine--glycine ligase [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492616|gb|EFM64650.1| phosphoribosylamine--glycine ligase [Peptostreptococcus stomatis
           DSM 17678]
          Length = 422

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 22/105 (20%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K    ++++P AK    + +  A   I +   P+ V+K+   A G+             
Sbjct: 106 SKEFFVRHDIPTAKYKEYTDIDKAIEEIDSFGYPV-VIKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV +  + +  I+     L   +  K+ G  G   N V VE+  
Sbjct: 152 -GVVIPENREDAIAT----LKMIMADKKFGDAG---NLVVVEEFL 188


>gi|283956646|ref|ZP_06374125.1| phosphoribosylamine--glycine ligase [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283791895|gb|EFC30685.1| phosphoribosylamine--glycine ligase [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 416

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 22/105 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+ L+KY +  AK +  + +  A++ I +L  P  VVK+     G+              
Sbjct: 105 KSFLKKYRIKTAKFLNTNDIEKAKNFIHSL-TPPIVVKADGLCAGK-------------- 149

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGAD 113
           GV +  + +  I +  ++L      +  G  G  V    +E+  D
Sbjct: 150 GVIIAKTHEEAIEETAKML----SGESFGDAGKLV---VIEEFLD 187


>gi|227511346|ref|ZP_03941395.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
           buchneri ATCC 11577]
 gi|227085396|gb|EEI20708.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Lactobacillus
           buchneri ATCC 11577]
          Length = 1021

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 59/205 (28%), Gaps = 46/205 (22%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGG 69
            LL   N+   +G    + H A +    L  P+ V  S +  G                G
Sbjct: 674 DLLIDQNIAHPQGDTAMNGHEAHAIANKLGYPVLVRPSFVLGG---------------KG 718

Query: 70  VRVESSLKSVIS----DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVD 125
           + V  + + +       ++   G  ++  Q  P G+      + DG D+           
Sbjct: 719 MAVVHNSEELDEYLVPALKASAGQPILIDQYIP-GTECEVDILSDGKDVFV--------- 768

Query: 126 RTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARI 185
                   +   +G              I       L     E + S+   +  +  A  
Sbjct: 769 -----PGIMEHLEG------SGIHSGDSIAMYPPQHLTDEQKEKIVSIATKIGKKVHAVG 817

Query: 186 DGGDLFPNLYKAFCDKDMSLLEINP 210
                F       C  D+ ++E+NP
Sbjct: 818 MMNIQFI------CANDVYVIEVNP 836


>gi|169825269|ref|YP_001692880.1| pyruvate carboxylase [Finegoldia magna ATCC 29328]
 gi|167832074|dbj|BAG08990.1| pyruvate carboxylase [Finegoldia magna ATCC 29328]
          Length = 1139

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           Q+K + +K  V   +GV   I + + A      +  P+ V K+    GGRG
Sbjct: 121 QSKLVAKKAGVQTIEGVETPIRNKNEALEIANQIGYPVMV-KACAGGGGRG 170


>gi|148244935|ref|YP_001219629.1| carbamoyl-phosphate synthase large subunit [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326762|dbj|BAF61905.1| carbamoyl-phosphate synthase large subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 1068

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 52/172 (30%), Gaps = 37/172 (21%)

Query: 9   KALLRKY----NVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R+      + + K  V  ++  A +  +T+  P  +             R      
Sbjct: 129 RDLFREAMLKIGLDMPKAAVAHNMEEAFTIQETVGFPTVI-------------RPSFTMG 175

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S GG+    +    +                G   S +N + VE+     +E  L ++ 
Sbjct: 176 GSGGGI--AYNKDEFVKICE-----------CGLDLSPINELLVEESILGWKEFELEVIR 222

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
           DR    +           IE            + + P   +T ++  ++ D 
Sbjct: 223 DRKDNCIII-------CSIENFDPIGIHTGDSITVAPAQTLTDKEYQAMRDA 267


>gi|126650982|ref|ZP_01723193.1| acetyl-CoA carboxylase [Bacillus sp. B14905]
 gi|126592183|gb|EAZ86232.1| acetyl-CoA carboxylase [Bacillus sp. B14905]
          Length = 452

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRF---KE 61
           +A+  ++   VP+ +GV   +     A    + L  P+ ++K+    GG G       +E
Sbjct: 118 EARKTMKAAGVPIVEGVETPVKDAEEATEIAERLGYPI-MLKASAGGGGIGMQLVENAEE 176

Query: 62  LPADSKGGVRVESS 75
           L    +G  +   S
Sbjct: 177 LVKAFEGNQKRAQS 190


>gi|161524159|ref|YP_001579171.1| phosphoribosylamine--glycine ligase [Burkholderia multivorans ATCC
           17616]
 gi|189351084|ref|YP_001946712.1| phosphoribosylamine--glycine ligase [Burkholderia multivorans ATCC
           17616]
 gi|160341588|gb|ABX14674.1| phosphoribosylamine--glycine ligase [Burkholderia multivorans ATCC
           17616]
 gi|189335106|dbj|BAG44176.1| phosphoribosylamine-glycine ligase [Burkholderia multivorans ATCC
           17616]
          Length = 425

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 25/132 (18%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AKA ++++ +P A     S   AA + I     P+ VVK+   A G+             
Sbjct: 106 AKAFMKRHGIPTADYETFSDAAAAHAYIDAKGAPI-VVKADGLAAGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRT 127
            GV V  +L+     +       L   + G  G+RV    +E+  D     ++ ++  + 
Sbjct: 152 -GVVVAMTLEEAHEAVD----MMLSGNKLGDAGARV---VIEEFLDGEEASFIVMVDGKH 203

Query: 128 SGMVAFIASTQG 139
           +     +AS+Q 
Sbjct: 204 A---LALASSQD 212


>gi|21231291|ref|NP_637208.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66768657|ref|YP_243419.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|188991525|ref|YP_001903535.1| carbamoyl phosphate synthase large subunit [Xanthomonas campestris
           pv. campestris str. B100]
 gi|22095492|sp|P58943|CARB_XANCP RecName: Full=Carbamoyl-phosphate synthase large chain; AltName:
           Full=Carbamoyl-phosphate synthetase ammonia chain
 gi|21112944|gb|AAM41132.1| carbamoyl-phosphate synthase large chain [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66573989|gb|AAY49399.1| carbamoyl-phosphate synthase large chain [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|167733285|emb|CAP51484.1| Carbamoyl-phosphate synthase large chain [Xanthomonas campestris
           pv. campestris]
          Length = 1080

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +   +  V  ++  A      +  P  +         R          
Sbjct: 129 RELFRVAMGEIGLDCPRAEVAHTLEEALDIQTRVGYPTII---------RPSFTLGGSGG 179

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + +I  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 180 G------IAYNREELIDIVGRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 221

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I        IE +          + + P   +T ++   L D 
Sbjct: 222 -RDTADNCIIVCA-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 267


>gi|85709866|ref|ZP_01040931.1| phosphoribosylamine-glycine ligase [Erythrobacter sp. NAP1]
 gi|85688576|gb|EAQ28580.1| phosphoribosylamine-glycine ligase [Erythrobacter sp. NAP1]
          Length = 428

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 23/115 (20%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K L  +  +P    V   S   A +A+     P +V+K+   A G+              
Sbjct: 107 KDLCARAEIPTGGYVRTHSRDEAVAALDGFSAP-FVLKADGLAAGK-------------- 151

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLL 123
           GV +  + +   + + ++ G      Q G  G+    V +E+  +     + ++ 
Sbjct: 152 GVVISPTREHAEATLSDMFG-----GQFGSAGA---QVVIEEFLEGEEASFFAIT 198


>gi|121603915|ref|YP_981244.1| cyanophycin synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592884|gb|ABM36323.1| cyanophycin synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 744

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K+LL    VPV +G +++S   A  A + +  P+ V  S  + G     R   L  +++ 
Sbjct: 228 KSLLASCGVPVPEGEIVASAEEAWEAAQDIGLPVVVKPSDANHG-----RGVSLDLNTRE 282

Query: 69  GVRVESSLKS 78
            V    ++  
Sbjct: 283 EVLAAFAVAE 292


>gi|68476615|ref|XP_717600.1| hypothetical protein CaO19.5062 [Candida albicans SC5314]
 gi|46439317|gb|EAK98636.1| hypothetical protein CaO19.5062 [Candida albicans SC5314]
          Length = 254

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 25/117 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + K+N+P A+    + V  A+  I+++   + V+K+   A G+             
Sbjct: 115 SKEFMDKHNIPTARFQNFTDVAKAKEHIQSIDYKI-VLKADGIAAGK------------- 160

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            GV +  + +  +  + EI    ++ K  G  G   N + +E+  +      LS+L 
Sbjct: 161 -GVLIPETTEEALQGLNEI----MVDKNFGDAG---NEIVIEEFLEGDE---LSILT 206


>gi|323698683|ref|ZP_08110595.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio sp.
           ND132]
 gi|323458615|gb|EGB14480.1| phosphoribosylglycinamide formyltransferase 2 [Desulfovibrio
           desulfuricans ND132]
          Length = 393

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 29/142 (20%)

Query: 13  RKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRV 72
            +  +  +      +     +A+  +  P  V+K  + + G+G+             VR 
Sbjct: 123 EEVGLTTSPYRFADTEEEYRAAVAEIGIPC-VIKPVMSSSGKGQST-----------VRS 170

Query: 73  ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVA 132
           E+ ++      +        +      G     V +E       E  +SLL  R      
Sbjct: 171 EADIQKAWEYSQ--------SGGRTGKG----RVIIEKFVPFDYE--ISLLTVRHIDGTT 216

Query: 133 F---IASTQGGMDIEEVAKDYP 151
           F   I   Q   D  E  +  P
Sbjct: 217 FCEPIGHRQENGDYRESWQPQP 238


>gi|317009692|gb|ADU80272.1| biotin carboxylase [Helicobacter pylori India7]
          Length = 458

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK+++++  +PV +G   ++ S   AE     +  P+ +
Sbjct: 133 AKSVMKEAGMPVIEGSDGLLKSYQEAEEIADKIGYPVII 171


>gi|313793809|gb|EFS41840.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL110PA1]
 gi|313803123|gb|EFS44331.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL110PA2]
 gi|313808336|gb|EFS46807.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL087PA2]
 gi|313813881|gb|EFS51595.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL025PA1]
 gi|313818047|gb|EFS55761.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL046PA2]
 gi|313827041|gb|EFS64755.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL063PA1]
 gi|313839252|gb|EFS76966.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL086PA1]
 gi|314961751|gb|EFT05852.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL002PA2]
 gi|314964735|gb|EFT08835.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL082PA1]
 gi|314979663|gb|EFT23757.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL072PA2]
 gi|314988217|gb|EFT32308.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL005PA2]
 gi|314990304|gb|EFT34395.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL005PA3]
 gi|315079296|gb|EFT51299.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL053PA2]
 gi|315082240|gb|EFT54216.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL078PA1]
 gi|315083790|gb|EFT55766.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL027PA2]
 gi|315087429|gb|EFT59405.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL002PA3]
 gi|315089846|gb|EFT61822.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL072PA1]
 gi|327326490|gb|EGE68278.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL096PA3]
 gi|327449689|gb|EGE96343.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL013PA2]
 gi|327456141|gb|EGF02796.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL092PA1]
 gi|328757274|gb|EGF70890.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL020PA1]
 gi|332676390|gb|AEE73206.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes 266]
          Length = 439

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 106 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDGLAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 152 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 196


>gi|313763798|gb|EFS35162.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL013PA1]
 gi|313817039|gb|EFS54753.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL059PA1]
 gi|314916609|gb|EFS80440.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL005PA4]
 gi|314919459|gb|EFS83290.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL050PA1]
 gi|314920941|gb|EFS84772.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL050PA3]
 gi|314932347|gb|EFS96178.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL067PA1]
 gi|314956656|gb|EFT00908.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL027PA1]
 gi|314959568|gb|EFT03670.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL002PA1]
 gi|314968760|gb|EFT12858.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL037PA1]
 gi|315100119|gb|EFT72095.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL059PA2]
 gi|315102441|gb|EFT74417.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL046PA1]
 gi|315109643|gb|EFT81619.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL030PA2]
 gi|327455763|gb|EGF02418.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL087PA3]
 gi|327457910|gb|EGF04565.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL083PA2]
 gi|328757079|gb|EGF70695.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL087PA1]
 gi|328757457|gb|EGF71073.1| phosphoribosylamine--glycine ligase [Propionibacterium acnes
           HL025PA2]
          Length = 439

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 16/106 (15%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           AK ++    VP A        ++  +A+     P YVVK    AGG+             
Sbjct: 106 AKEVMAAARVPTAASRSCDDANSVSAALDEFG-PPYVVKDDGLAGGK------------- 151

Query: 68  GGVRVESSLKSVISDIREILGST-LITKQTGPTGSRVNCVYVEDGA 112
            GV V       ++  +    S   +  +    G  V+   + DG 
Sbjct: 152 -GVVVTHDRAEALAHAKRCFESDHRVVVEEYLDGPEVSLFAICDGT 196


>gi|307637750|gb|ADN80200.1| Biotin carboxylase of acetyl-CoA carboxylase [Helicobacter pylori
           908]
 gi|325997939|gb|ADZ50147.1| Biotin carboxylase [Helicobacter pylori 2017]
          Length = 455

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK+++++  +PV +G   ++ S   AE     +  P+ +
Sbjct: 130 AKSVMKEAGMPVIEGSEGLLKSYQEAEEIADKIGYPVII 168


>gi|302380992|ref|ZP_07269453.1| pyruvate carboxylase [Finegoldia magna ACS-171-V-Col3]
 gi|302311213|gb|EFK93233.1| pyruvate carboxylase [Finegoldia magna ACS-171-V-Col3]
          Length = 1139

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 7   QAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRG 55
           Q+K + +K  V   +GV   I + + A      +  P+ V K+    GGRG
Sbjct: 121 QSKLVAKKAGVQTIEGVETPIRNKNEALEIANQIGYPVMV-KACAGGGGRG 170


>gi|315586974|gb|ADU41355.1| acetyl-CoA carboxylase subunit A [Helicobacter pylori 35A]
          Length = 455

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           AK+++++  +PV +G   ++ S   AE     +  P+ +
Sbjct: 130 AKSVMKEAGMPVIEGSDGLLKSYQEAEEIADKIGYPVII 168


>gi|282877990|ref|ZP_06286799.1| carbamoyl-phosphate synthase, large subunit [Prevotella buccalis
           ATCC 35310]
 gi|281299991|gb|EFA92351.1| carbamoyl-phosphate synthase, large subunit [Prevotella buccalis
           ATCC 35310]
          Length = 1076

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 28/122 (22%)

Query: 12  LRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71
           LR+ +V   K     ++  A  A K+L  P+ +  +    G                G  
Sbjct: 135 LREIDVKTIKSEACENIEQARKAAKSLGYPVIIRAAYALGGL---------------GSG 179

Query: 72  VESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMV 131
              + + +     +       +    P       V VE      +E+   ++ DR    V
Sbjct: 180 FCDNEEELNKLAEK-------SFSFSP------QVLVEKSLKGWKEIEYEVVRDRYDNCV 226

Query: 132 AF 133
             
Sbjct: 227 TV 228


>gi|229496794|ref|ZP_04390505.1| phosphoribosylamine--glycine ligase [Porphyromonas endodontalis
           ATCC 35406]
 gi|229316340|gb|EEN82262.1| phosphoribosylamine--glycine ligase [Porphyromonas endodontalis
           ATCC 35406]
          Length = 456

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 25/107 (23%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPG--PLYVVKSQIHAGGRGKGRFKELPAD 65
           +KA +++Y +P        S +    A+  L    P +V+K+   A G+           
Sbjct: 143 SKAFMQRYGIPT-ASYRTFSANEKSEAVAYLQTLHPPFVLKADGLAAGK----------- 190

Query: 66  SKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
              GV +  +L+             L     G  G     + +E+  
Sbjct: 191 ---GVLIVPTLEEAAKG-----FDDLAEGIWGSKGQ---KIVIEEFL 226


>gi|115524917|ref|YP_781828.1| carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Rhodopseudomonas palustris BisA53]
 gi|115518864|gb|ABJ06848.1| Carbamoyl-phosphate synthase L chain, ATP-binding protein
           [Rhodopseudomonas palustris BisA53]
          Length = 669

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 8   AKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPAD 65
           +K L+ K  VP+  G            +  + +  P+ V K+    GGRG    +     
Sbjct: 128 SKELMEKAGVPLVPGYHGAAQDDATLLAEAEKVGFPVLV-KASAGGGGRGMRIVRAAADL 186

Query: 66  SKGGVRVESSLKSV 79
           +   V  +   K+ 
Sbjct: 187 AAAIVSAKREAKAA 200


>gi|330813929|ref|YP_004358168.1| biotin carboxylase of acetyl-CoA carboxylase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327487024|gb|AEA81429.1| biotin carboxylase of acetyl-CoA carboxylase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 447

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 7   QAKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYV 44
           QAK + ++  +PV KG    +S ++ A+     +  P+ +
Sbjct: 118 QAKKIAKELGLPVIKGSEKGVSEINEAKEIANKIGYPVLI 157


>gi|315453076|ref|YP_004073346.1| biotin carboxylase [Helicobacter felis ATCC 49179]
 gi|315132128|emb|CBY82756.1| biotin carboxylase [Helicobacter felis ATCC 49179]
          Length = 449

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 8   AKALLRKYNVPVAKG--VVISSVHAAESAIKTLPGPLYVVKS 47
           AKA++R+  VPV +G   V+     A    + +  P+ +  +
Sbjct: 126 AKAVMREAGVPVIEGSEGVLRGYEEALKVAERIGFPIIIKAA 167


>gi|269216489|ref|ZP_06160343.1| phosphoribosylamine--glycine ligase [Slackia exigua ATCC 700122]
 gi|269130018|gb|EEZ61100.1| phosphoribosylamine--glycine ligase [Slackia exigua ATCC 700122]
          Length = 424

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 23/105 (21%)

Query: 8   AKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSK 67
           +K  + ++ +P A+         A + ++    P+ VVK+   A G+             
Sbjct: 107 SKEFMIRHGLPTARYRACDCEADALAFVRETGAPI-VVKADGLAAGK------------- 152

Query: 68  GGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGA 112
            GV V   L+     + +       T          + V +E+  
Sbjct: 153 -GVVVADDLEEAEEAVHDCFAGAFGTAG--------SSVVIEECL 188


>gi|308235015|ref|ZP_07665752.1| D-alanyl-alanine synthetase A [Gardnerella vaginalis ATCC 14018]
 gi|311114197|ref|YP_003985418.1| D-alanine--D-alanine ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945691|gb|ADP38395.1| D-alanine--D-alanine ligase [Gardnerella vaginalis ATCC 14019]
          Length = 381

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 36/127 (28%), Gaps = 13/127 (10%)

Query: 6   YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKE-LPA 64
           Y AK L +   + VA G+ +     A  A          +  Q+         F +   A
Sbjct: 147 YYAKQLFKAAGIDVAPGIALDVRKFASDAANHFDAYANEILEQVEEAKLEYPLFVKPSRA 206

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
            S  GV    S     +                        V VE G D  RE+  ++L 
Sbjct: 207 GSSFGVTKVESRD-AKALA----------DAVYEASKHDWRVLVEQGID-AREIECAVLA 254

Query: 125 DRTSGMV 131
            R     
Sbjct: 255 ARDGDEP 261


>gi|254524347|ref|ZP_05136402.1| carbamoyl-phosphate synthase, large subunit [Stenotrophomonas sp.
           SKA14]
 gi|219721938|gb|EED40463.1| carbamoyl-phosphate synthase, large subunit [Stenotrophomonas sp.
           SKA14]
          Length = 1090

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 48/172 (27%), Gaps = 37/172 (21%)

Query: 9   KALLR----KYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPA 64
           + L R    +  +      V  ++  A      +  P  +         R          
Sbjct: 139 RELFRVAMGEIGLECPTAAVAHTLDEALEIQTRVGYPTII---------RPSFTLGGSGG 189

Query: 65  DSKGGVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLV 124
                  +  + + ++  +   L  +  T+           V VE+     +E  + ++ 
Sbjct: 190 G------IAYNREELVEIVSRGLELSPTTE-----------VLVEESVLGWKEFEMEVV- 231

Query: 125 DRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSEDVASLCDM 176
            R +     I  +     IE +          + + P   +T ++   L D 
Sbjct: 232 -RDTADNCIIVCS-----IENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDA 277


>gi|146283600|ref|YP_001173753.1| phosphoribosylamine--glycine ligase [Pseudomonas stutzeri A1501]
 gi|145571805|gb|ABP80911.1| phosphoribosylamine--glycine ligase [Pseudomonas stutzeri A1501]
          Length = 430

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 9   KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKG 68
           K  L ++ +P A     + V  A + ++    P+ V+K+   A G+              
Sbjct: 108 KDFLARHAIPTADYQNFTEVEPALAYLREKGAPI-VIKADGLAAGK-------------- 152

Query: 69  GVRVESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTS 128
           GV V  +L      +R++L         G  G+RV    +E+  D   E    ++VD   
Sbjct: 153 GVIVAMTLAEAEDAVRDML----SGNAFGDAGARV---VIEEFLD-GEEASFIVMVDGEH 204

Query: 129 GMVA 132
            +  
Sbjct: 205 VLPM 208


>gi|219669223|ref|YP_002459658.1| carbamoyl-phosphate synthase, large subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219539483|gb|ACL21222.1| carbamoyl-phosphate synthase, large subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 1079

 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 10  ALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAG 52
            LL +  +P ++G   +SV  A +    L  P+ V  S +  G
Sbjct: 672 QLLLELGIPQSEGCAATSVSQARAIAGELGFPVLVRPSYVIGG 714


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.145    0.396 

Lambda     K      H
   0.267   0.0446    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,180,782,731
Number of Sequences: 14124377
Number of extensions: 305811489
Number of successful extensions: 1075993
Number of sequences better than 10.0: 9985
Number of HSP's better than 10.0 without gapping: 6665
Number of HSP's successfully gapped in prelim test: 5605
Number of HSP's that attempted gapping in prelim test: 1050304
Number of HSP's gapped (non-prelim): 17613
length of query: 398
length of database: 4,842,793,630
effective HSP length: 141
effective length of query: 257
effective length of database: 2,851,256,473
effective search space: 732772913561
effective search space used: 732772913561
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 83 (36.5 bits)